BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|255764490|ref|YP_003065085.2| dehydrogenase, E1 component [Candidatus Liberibacter asiaticus str. psy62] (364 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|255764490|ref|YP_003065085.2| dehydrogenase, E1 component [Candidatus Liberibacter asiaticus str. psy62] gi|254547841|gb|ACT57145.2| dehydrogenase, E1 component [Candidatus Liberibacter asiaticus str. psy62] Length = 364 Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/364 (100%), Positives = 364/364 (100%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLML 60 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLML Sbjct: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLML 60 Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV Sbjct: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 Query: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD Sbjct: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV Sbjct: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREE 300 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREE Sbjct: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREE 300 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS Sbjct: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 Query: 361 DILI 364 DILI Sbjct: 361 DILI 364 >gi|315122217|ref|YP_004062706.1| dehydrogenase, E1 component [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495619|gb|ADR52218.1| dehydrogenase, E1 component [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 350 Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust. Identities = 283/350 (80%), Positives = 322/350 (92%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 MALN S+S K SSVD +DI F + F+VSEF+K QELSAY+ MLLIRRFEEK GQLYG Sbjct: 1 MALNTSISGKENGISSVDHMDISFFKEFKVSEFDKTQELSAYQKMLLIRRFEEKTGQLYG 60 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 MG++GGFCHLCIGQEAVI+GMKM++ EGDQMITAYR+HGHIL+CGV+ASK+MAELTGRQG Sbjct: 61 MGLIGGFCHLCIGQEAVIIGMKMAMAEGDQMITAYRDHGHILSCGVEASKVMAELTGRQG 120 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 GISKGKGGSMHMFST+NGFYGGHGIVGAQVSLGTGIAFANKYR+SDK+CVVC GDGAANQ Sbjct: 121 GISKGKGGSMHMFSTENGFYGGHGIVGAQVSLGTGIAFANKYRKSDKVCVVCLGDGAANQ 180 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 GQVYESFN+A LW L VIYVIENNQYAMGTSV+RASAQ N SKRG+SFNIPG+QVDGMD+ Sbjct: 181 GQVYESFNMAELWKLGVIYVIENNQYAMGTSVARASAQPNLSKRGISFNIPGIQVDGMDV 240 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 R+VKA ++KA AYCRA+KGPII+EMLTYRYRGHSMSDPA YRTR+E+N+MR+NHDPIEQV Sbjct: 241 RSVKAAIEKATAYCRANKGPIILEMLTYRYRGHSMSDPATYRTRDEVNDMRTNHDPIEQV 300 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 R+RLL KWASE DLK IEM+VRKI+N+SVEFAQSD+EP+ +ELYSDILI Sbjct: 301 RERLLQKKWASESDLKAIEMSVRKIVNDSVEFAQSDEEPNSSELYSDILI 350 >gi|110633982|ref|YP_674190.1| dehydrogenase, E1 component [Mesorhizobium sp. BNC1] gi|110284966|gb|ABG63025.1| dehydrogenase, E1 component [Chelativorans sp. BNC1] Length = 360 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 232/347 (66%), Positives = 287/347 (82%), Gaps = 1/347 (0%) Query: 19 PSVSAKRAATSSVDCV-DIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 P+ + R A ++ + D P L+ + EF KEQELS++R MLLIRRFEEKAGQLYGMG Sbjct: 14 PARAGTRPAKKTIPMLNDTPVLDIPKPEEFTKEQELSSFREMLLIRRFEEKAGQLYGMGF 73 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 +GGFCHL IGQEAV++GM+M++ EGDQ+IT YR+HGH+LA G+D +MAELTGR+ G S Sbjct: 74 IGGFCHLYIGQEAVVIGMQMAMKEGDQVITGYRDHGHMLATGMDPRGVMAELTGRRSGYS 133 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 +GKGGSMHMFS + F+GGHGIVGAQV LGTGIA AN+YR +D + + FGDGAANQGQV Sbjct: 134 RGKGGSMHMFSKEKNFFGGHGIVGAQVPLGTGIALANRYRGNDSVSLTYFGDGAANQGQV 193 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 YESFN+A+LW L VIY+IENN+YAMGT+VSR+SA+TNF+ RG+SF IPG+QVDGMD+RAV Sbjct: 194 YESFNMASLWKLPVIYIIENNRYAMGTAVSRSSAETNFAHRGLSFKIPGVQVDGMDVRAV 253 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 KA D AV +CR+ KGPII+EM TYRYRGHSMSDPA YR+++E+ +MRS HDPIEQVRKR Sbjct: 254 KAAGDMAVEWCRSGKGPIILEMQTYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVRKR 313 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 LL KWASE DLK ++ VR I+ ++ +FAQSD EPDP+ELY+DILI Sbjct: 314 LLDKKWASEDDLKAVDKEVRDIVADAADFAQSDPEPDPSELYTDILI 360 >gi|153009389|ref|YP_001370604.1| dehydrogenase E1 component [Ochrobactrum anthropi ATCC 49188] gi|151561277|gb|ABS14775.1| dehydrogenase E1 component [Ochrobactrum anthropi ATCC 49188] Length = 346 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 228/342 (66%), Positives = 285/342 (83%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 AK++ S + + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +GGFC Sbjct: 5 AKKSPASKTQASSVTAPKAPAPVNFDKKQELDAYREMLLIRRFEEKAGQLYGMGFIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAV+VGM+M+L EGDQ+ITAYR+HGH+LA G+ A +MAELTGR+ G+SKGKGG Sbjct: 65 HLYIGQEAVVVGMQMALKEGDQVITAYRDHGHMLAAGMSARGVMAELTGRRSGLSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR +D + + FGDGA+NQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANRYRDNDNVTLTYFGDGASNQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A+LW L V+Y+IENN+YAMGTSVSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA D Sbjct: 185 MASLWKLPVVYIIENNRYAMGTSVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKAAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 AV + R+ KGPII++M TYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV++RL+ Sbjct: 245 LAVEWTRSGKGPIILDMQTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKQRLIDKG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LKEI+ +VR I+ +S +FAQ+D EPD +ELY+DIL+ Sbjct: 305 WATEEELKEIDKDVRDIVADSADFAQNDPEPDASELYTDILL 346 >gi|222085876|ref|YP_002544407.1| pyruvate dehydrogenase alpha subunit protein [Agrobacterium radiobacter K84] gi|221723324|gb|ACM26480.1| pyruvate dehydrogenase alpha subunit protein [Agrobacterium radiobacter K84] Length = 347 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 235/343 (68%), Positives = 281/343 (81%), Gaps = 2/343 (0%) Query: 24 KRAATSSVDCVDIPFLE--GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF 81 K A+ SS P E G ++EF+++ ELSAYR MLLIRRFEEKAGQLYGMG +GGF Sbjct: 5 KSASVSSRKTASRPAKETNGGAIAEFDRDAELSAYREMLLIRRFEEKAGQLYGMGFIGGF 64 Query: 82 CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKG 141 CHL IGQEAV+VGM+M+L +GDQ+IT YR+HGH+LA G+ A +MAELTGR+GG S+GKG Sbjct: 65 CHLYIGQEAVVVGMQMALKDGDQVITGYRDHGHMLAAGMSARGVMAELTGRKGGYSRGKG 124 Query: 142 GSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF 201 GSMHMFS + FYGGHGIVGAQVSLGTG+ FAN YR +D + V FGDGAANQGQVYESF Sbjct: 125 GSMHMFSKEKNFYGGHGIVGAQVSLGTGLGFANWYRGNDSVSVAYFGDGAANQGQVYESF 184 Query: 202 NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 N+A LW L VIYVIENN+YAMGTS +RA+AQ +FSKRG SF IPG+QVD MD+RAVKA Sbjct: 185 NMAQLWKLPVIYVIENNRYAMGTSTARATAQPDFSKRGASFGIPGIQVDAMDVRAVKAAA 244 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHN 321 D+AV YCR+ KGPII+EMLTYRYRGHSMSDPA YR+++E+ +MRS HDPIEQVR RLL Sbjct: 245 DEAVEYCRSGKGPIILEMLTYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVRVRLLDK 304 Query: 322 KWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WASE DLK I+ +VR I+ +S +FAQ+D EPD +ELY+DIL+ Sbjct: 305 GWASEDDLKVIDKDVRDIVADSADFAQADPEPDASELYTDILL 347 >gi|239832018|ref|ZP_04680347.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Ochrobactrum intermedium LMG 3301] gi|239824285|gb|EEQ95853.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Ochrobactrum intermedium LMG 3301] Length = 366 Score = 501 bits (1290), Expect = e-140, Method: Compositional matrix adjust. Identities = 230/342 (67%), Positives = 285/342 (83%), Gaps = 5/342 (1%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 A +A SSV P + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +GGFC Sbjct: 30 ANKAQASSVTAPKAP-----APANFDKKQELDAYREMLLIRRFEEKAGQLYGMGFIGGFC 84 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAV+VGM+M+L EGDQ+ITAYR+HGH+LA G+ A +MAELTGR+ G+SKGKGG Sbjct: 85 HLYIGQEAVVVGMQMALKEGDQVITAYRDHGHMLAAGMSARGVMAELTGRRSGLSKGKGG 144 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR +D + + FGDGA+NQGQVYESFN Sbjct: 145 SMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRDNDNVTLTYFGDGASNQGQVYESFN 204 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A+LW L V+Y+IENN+YAMGTSVSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA D Sbjct: 205 MASLWKLPVVYIIENNRYAMGTSVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKAAAD 264 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 AV + R+ KGPII++M TYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV++R++ Sbjct: 265 LAVEWTRSGKGPIILDMQTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKQRVIEKG 324 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LKEI+ VR I+ +S +FAQ+D EPD +ELY+DIL+ Sbjct: 325 WATEEELKEIDKEVRDIVADSADFAQNDPEPDASELYTDILL 366 >gi|260459502|ref|ZP_05807757.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Mesorhizobium opportunistum WSM2075] gi|259035056|gb|EEW36312.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Mesorhizobium opportunistum WSM2075] Length = 345 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 225/344 (65%), Positives = 281/344 (81%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 +A R A + L + +EF K++EL+AYR MLLIRRFEEKAGQLYGMG +GG Sbjct: 2 ATAARKAPAKSKSDGKSVLSAPKPAEFTKDEELAAYRHMLLIRRFEEKAGQLYGMGFIGG 61 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL IGQEAV+ GMKM+L +GDQMITAYR+HGH+LA + +MAELTGR+GG+S+GK Sbjct: 62 FCHLYIGQEAVVTGMKMALIDGDQMITAYRDHGHMLAMELSPRGVMAELTGRRGGLSRGK 121 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR ++ + + FGDGAANQGQVYES Sbjct: 122 GGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRENNNVSLTYFGDGAANQGQVYES 181 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A+LW L VIY+IENN+YAMGTSVSR+SA+TNFS RG SF IPG+QVDGMD+RAVK+ Sbjct: 182 FNMASLWKLPVIYIIENNRYAMGTSVSRSSAETNFSHRGASFKIPGIQVDGMDVRAVKSA 241 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 D+A +CRA GPII+EM TYRYRGHSMSDPA YR++EE+ +MRS+HDPIEQV+ RL Sbjct: 242 GDQATEWCRAGNGPIILEMQTYRYRGHSMSDPAKYRSKEEVQKMRSDHDPIEQVKARLTQ 301 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 KWA+E +LK I+ VR ++ ++ EFAQ+D EPDP+EL++DI++ Sbjct: 302 KKWATEDELKAIDKEVRDVVADAAEFAQNDAEPDPSELWTDIVL 345 >gi|319783388|ref|YP_004142864.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169276|gb|ADV12814.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 345 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 223/319 (69%), Positives = 274/319 (85%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 EF K++EL+AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+ GMKM+L +GDQM Sbjct: 27 EFTKDEELAAYRHMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVTGMKMALIDGDQM 86 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+HGH+LA + +MAELTGR+GG+S+GKGGSMHMFS + FYGGHGIVGAQVS Sbjct: 87 ITAYRDHGHMLAMELSPRGVMAELTGRRGGLSRGKGGSMHMFSKEKHFYGGHGIVGAQVS 146 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTG+AFAN+YR ++ + + FGDGAANQGQVYESFN+A+LW L VIY+IENN+YAMGTS Sbjct: 147 LGTGLAFANRYRDNNNVSLTYFGDGAANQGQVYESFNMASLWKLPVIYIIENNRYAMGTS 206 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 VSR+SA+TNFS RG SF IPG+QVDGMD+RAVKA D+A +CRA GPII+EM TYRYR Sbjct: 207 VSRSSAETNFSHRGASFKIPGIQVDGMDVRAVKAAGDQATEWCRAGNGPIILEMQTYRYR 266 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YR++EE+ +MRS+HDPIEQV+ RL+ KWA+E +LK I+ VR I+ ++ E Sbjct: 267 GHSMSDPAKYRSKEEVQKMRSDHDPIEQVKARLIEKKWATEDELKTIDKEVRDIVADAAE 326 Query: 346 FAQSDKEPDPAELYSDILI 364 FAQ+D EPDP+EL++DI++ Sbjct: 327 FAQNDAEPDPSELWTDIVL 345 >gi|227821846|ref|YP_002825816.1| pyruvate dehydrogenase E1 component alpha subunit [Sinorhizobium fredii NGR234] gi|227340845|gb|ACP25063.1| pyruvate dehydrogenase E1 component alpha subunit [Sinorhizobium fredii NGR234] Length = 348 Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust. Identities = 240/347 (69%), Positives = 291/347 (83%), Gaps = 8/347 (2%) Query: 20 SVSAKRAA--TSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 SVS+++AA TS D G ++EF+KE EL AYR MLLIRRFEEKAGQLYGMG Sbjct: 8 SVSSRKAAAKTSKKD------FAGGTIAEFSKEDELKAYREMLLIRRFEEKAGQLYGMGF 61 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 +GGFCHL IGQEAV+VGM+++L EGDQ+IT YR+HGH+LACG+ A +MAELTGR+GG+S Sbjct: 62 IGGFCHLYIGQEAVVVGMQLALKEGDQVITGYRDHGHMLACGMSARGVMAELTGRRGGLS 121 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR +D + + FGDGAANQGQV Sbjct: 122 KGKGGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRGNDNVSLAYFGDGAANQGQV 181 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 YESFN+AALW L VIY++ENN+YAMGTSVSRASAQT+FS+RG SF IPG QVDGMD+RAV Sbjct: 182 YESFNMAALWKLPVIYIVENNRYAMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRAV 241 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 KA D+AV +CR+ KGPII+EMLTYRYRGHSMSDPA YR+++E+ +MRS HDPIEQV+ R Sbjct: 242 KAAADEAVEHCRSGKGPIILEMLTYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVKAR 301 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 L+ WASE +LK+++ VR I+ +S +FAQSD EPD AELY+DIL+ Sbjct: 302 LVEKGWASEDELKQVDKEVRDIVADSADFAQSDPEPDVAELYTDILL 348 >gi|163760091|ref|ZP_02167174.1| putative pyruvate dehydrogenase subunit [Hoeflea phototrophica DFL-43] gi|162282490|gb|EDQ32778.1| putative pyruvate dehydrogenase subunit [Hoeflea phototrophica DFL-43] Length = 345 Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust. Identities = 221/321 (68%), Positives = 275/321 (85%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++EF+K+ EL AYR ML+IRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+MSL +GD Sbjct: 25 ITEFSKDAELEAYREMLMIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMSLKDGD 84 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q+IT YR+HGH+LA G++A +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVG Q Sbjct: 85 QVITGYRDHGHMLATGMEARGVMAELTGRRGGYSRGKGGSMHMFSKEKNFYGGHGIVGGQ 144 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTG+AFAN+YR +D + + FGDGAANQGQVYESFN+AALW L V+Y++ENN+YAMG Sbjct: 145 VSLGTGLAFANRYRGNDNVSLTYFGDGAANQGQVYESFNMAALWKLPVVYIVENNRYAMG 204 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TS+ R+SAQ+NFS RG SF IPG QVDGMD+RAV A ++AVA+CRA KGPII+EMLTYR Sbjct: 205 TSIERSSAQSNFSLRGNSFGIPGHQVDGMDVRAVHAAGEEAVAHCRAGKGPIILEMLTYR 264 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YRT++E+ +MR+ HDPIEQV+ R+L K ASE DLK I+ N+R ++ +S Sbjct: 265 YRGHSMSDPAKYRTKDEVQKMRAEHDPIEQVKARILEMKHASEDDLKAIDKNIRDVVADS 324 Query: 344 VEFAQSDKEPDPAELYSDILI 364 +FAQ++ EPD +ELY+DIL+ Sbjct: 325 ADFAQANPEPDASELYTDILL 345 >gi|241204524|ref|YP_002975620.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858414|gb|ACS56081.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 348 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 219/324 (67%), Positives = 275/324 (84%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V++F++ +EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 25 GGPVADFDRNEELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAQK 84 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 +GDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GKGGSMHMFS + FYGGHGIV Sbjct: 85 DGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGKGGSMHMFSKEKHFYGGHGIV 144 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN+YR +D + + FGDGAANQGQVYESFN+AALW L ++Y++ENN+Y Sbjct: 145 GAQVSLGTGLAFANRYRGNDNVSIAYFGDGAANQGQVYESFNMAALWKLPIVYIVENNRY 204 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS +RA+AQ+N+S RG F IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EML Sbjct: 205 AMGTSTARATAQSNYSLRGSGFGIPGIQVDGMDVRAVKAAADEALEHCRSGKGPIILEML 264 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YR+++E+ +MRS HDPIEQV+ RL+ WASE DLK I+ +VR I+ Sbjct: 265 TYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVKARLVEKGWASEDDLKAIDKDVRDIV 324 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +S +FAQ+D EPD +ELY+DIL+ Sbjct: 325 ADSADFAQADPEPDASELYTDILL 348 >gi|116251997|ref|YP_767835.1| pyruvate dehydrogenase subunit [Rhizobium leguminosarum bv. viciae 3841] gi|115256645|emb|CAK07733.1| putative pyruvate dehydrogenase subunit [Rhizobium leguminosarum bv. viciae 3841] Length = 348 Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust. Identities = 219/324 (67%), Positives = 275/324 (84%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V++F++ +EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 25 GGPVADFDRNEELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAQK 84 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 +GDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GKGGSMHMFS + FYGGHGIV Sbjct: 85 DGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGKGGSMHMFSKEKHFYGGHGIV 144 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN+YR +D + + FGDGAANQGQVYESFN+AALW L ++Y++ENN+Y Sbjct: 145 GAQVSLGTGLAFANRYRGNDSVSIAYFGDGAANQGQVYESFNMAALWKLPIVYIVENNRY 204 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS +RA+AQ+N+S RG F IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EML Sbjct: 205 AMGTSTARATAQSNYSLRGSGFGIPGIQVDGMDVRAVKAAADEALEHCRSGKGPIILEML 264 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YR+++E+ +MRS HDPIEQV+ RL+ WASE DLK I+ +VR I+ Sbjct: 265 TYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVKARLVEKGWASEDDLKAIDKDVRDIV 324 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +S +FAQ+D EPD +ELY+DIL+ Sbjct: 325 ADSADFAQADPEPDVSELYTDILL 348 >gi|86357554|ref|YP_469446.1| pyruvate dehydrogenase alpha subunit protein [Rhizobium etli CFN 42] gi|86281656|gb|ABC90719.1| pyruvate dehydrogenase alpha subunit protein [Rhizobium etli CFN 42] Length = 348 Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust. Identities = 220/324 (67%), Positives = 273/324 (84%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V++F++++EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 25 GGPVADFDRDEELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAQK 84 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 EGDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GKGGSMHMFS + FYGGHGIV Sbjct: 85 EGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGKGGSMHMFSKEKHFYGGHGIV 144 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN YR + + + FGDGAANQGQVYESFN+AALW L ++Y++ENN+Y Sbjct: 145 GAQVSLGTGLAFANHYRGNGNVAIAYFGDGAANQGQVYESFNMAALWKLPIVYIVENNRY 204 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS +RA+AQ+N+S RG F IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EML Sbjct: 205 AMGTSTARATAQSNYSLRGSGFGIPGIQVDGMDVRAVKAAADEALEHCRSGKGPIILEML 264 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YRT+EE+ +MRS DPIEQV+ RL+ WASE DLK I+ +VR I+ Sbjct: 265 TYRYRGHSMSDPAKYRTKEEVQKMRSEQDPIEQVKARLIEKGWASEDDLKAIDKDVRDIV 324 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +S +FAQ+D EPD +ELY+DIL+ Sbjct: 325 ADSADFAQADPEPDASELYTDILL 348 >gi|190891627|ref|YP_001978169.1| pyruvate dehydrogenase (acetyl-transferring) protein, alpha subunit [Rhizobium etli CIAT 652] gi|190696906|gb|ACE90991.1| pyruvate dehydrogenase (acetyl-transferring) protein, alpha subunit [Rhizobium etli CIAT 652] Length = 348 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 220/324 (67%), Positives = 273/324 (84%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V++F++++EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 25 GGPVADFDRDEELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAQK 84 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 EGDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GKGGSMHMFS + FYGGHGIV Sbjct: 85 EGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGKGGSMHMFSKEKHFYGGHGIV 144 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN YR + + + FGDGAANQGQVYESFN+AALW L ++Y++ENN+Y Sbjct: 145 GAQVSLGTGLAFANHYRGNGNVSIAYFGDGAANQGQVYESFNMAALWKLPIVYIVENNRY 204 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS +RA+AQ+N+S RG F IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EML Sbjct: 205 AMGTSTARATAQSNYSLRGSGFGIPGIQVDGMDVRAVKAAADEALEHCRSGKGPIILEML 264 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YRT+EE+ +MRS DPIEQV+ RL+ WASE DLK I+ +VR I+ Sbjct: 265 TYRYRGHSMSDPAKYRTKEEVQKMRSEQDPIEQVKARLIEKGWASEDDLKAIDKDVRDIV 324 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +S +FAQ+D EPD +ELY+DIL+ Sbjct: 325 ADSADFAQADPEPDASELYTDILL 348 >gi|150396296|ref|YP_001326763.1| dehydrogenase E1 component [Sinorhizobium medicae WSM419] gi|150027811|gb|ABR59928.1| dehydrogenase E1 component [Sinorhizobium medicae WSM419] Length = 348 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 235/345 (68%), Positives = 288/345 (83%), Gaps = 4/345 (1%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 SVS+++ A V G ++EF+KE +L AYR MLLIRRFEEKAGQLYGMG +G Sbjct: 8 SVSSRKTAAKPVK----KDFAGGTIAEFSKEDDLKAYREMLLIRRFEEKAGQLYGMGFIG 63 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL IGQEAV+VGM+++L EGDQ+IT YR+HGH+LACG+ A +MAELTGR+GG+SKG Sbjct: 64 GFCHLYIGQEAVVVGMQLALKEGDQVITGYRDHGHMLACGMSARGVMAELTGRRGGLSKG 123 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR +D + + FGDGAANQGQVYE Sbjct: 124 KGGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRGNDNVSLAYFGDGAANQGQVYE 183 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 SFN+AALW L VIY++ENN+YAMGTSVSRASAQT+FS+RG SF IPG QVDGMD+RAVKA Sbjct: 184 SFNMAALWKLPVIYIVENNRYAMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKA 243 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 D+AV +CR+ KGPII+EMLTYRYRGHSMSDPA YR+++E+ +MRS HDPIEQV+ RL+ Sbjct: 244 AADEAVEHCRSGKGPIILEMLTYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVKARLM 303 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LK+I+ VR I+ +S +FAQSD EPD +ELY+DIL+ Sbjct: 304 DKGWATEDELKQIDKEVRDIVADSADFAQSDPEPDVSELYTDILL 348 >gi|154253581|ref|YP_001414405.1| pyruvate dehydrogenase (acetyl-transferring) [Parvibaculum lavamentivorans DS-1] gi|154157531|gb|ABS64748.1| Pyruvate dehydrogenase (acetyl-transferring) [Parvibaculum lavamentivorans DS-1] Length = 341 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 219/319 (68%), Positives = 268/319 (84%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + ++E +L AYR MLLIRRFEEKAGQ+YGMG++GGFCHL IGQEAV++GM+M++ EGDQ Sbjct: 18 APLSEEDDLRAYRDMLLIRRFEEKAGQMYGMGLIGGFCHLYIGQEAVVIGMQMAIEEGDQ 77 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT YR+HGH+LACG+D +MAELTGR GG S+GKGGSMHMFS F+GGHGIVGAQV Sbjct: 78 VITGYRDHGHMLACGMDPKGVMAELTGRDGGYSRGKGGSMHMFSRDKNFFGGHGIVGAQV 137 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LGTG+AFAN+YR +D++C+ FGDGAANQGQVYESFN+A LW+L V+YVIENNQYAMGT Sbjct: 138 PLGTGLAFANRYRENDRVCLAYFGDGAANQGQVYESFNMAELWSLPVVYVIENNQYAMGT 197 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV+R+SAQT+ SKRG SFNIPG QVDGMD+RAV+ +AV +CRA KGP I+EM TYRY Sbjct: 198 SVARSSAQTDLSKRGASFNIPGAQVDGMDVRAVREAGARAVEWCRAGKGPYILEMKTYRY 257 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR +EE+++MR+ HDPIEQVR RLL +K SE DLK I+ ++ I+N + Sbjct: 258 RGHSMSDPAKYRAKEEVSKMRAEHDPIEQVRMRLLESKSLSEDDLKAIDKEIKAIVNEAA 317 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFAQS EPDP EL++DIL Sbjct: 318 EFAQSSPEPDPRELWTDIL 336 >gi|15965198|ref|NP_385551.1| pyruvate dehydrogenase alpha2 subunit protein [Sinorhizobium meliloti 1021] gi|307309212|ref|ZP_07588883.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sinorhizobium meliloti BL225C] gi|307321955|ref|ZP_07601336.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sinorhizobium meliloti AK83] gi|8474229|sp|Q9R9N5|ODPA_RHIME RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|6164934|gb|AAF04587.1|AF190792_1 pyruvate dehydrogenase alpha subunit [Sinorhizobium meliloti] gi|15074378|emb|CAC46024.1| Pyruvate dehydrogenase E1 component alpha subunit [Sinorhizobium meliloti 1021] gi|306892379|gb|EFN23184.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sinorhizobium meliloti AK83] gi|306900358|gb|EFN30974.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sinorhizobium meliloti BL225C] Length = 348 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 235/344 (68%), Positives = 286/344 (83%), Gaps = 3/344 (0%) Query: 24 KRAATSSVDCVDIPFLEGF---EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 K A+ SS P + F ++EF+KE +L AYR MLLIRRFEEKAGQLYGMG +GG Sbjct: 5 KSASVSSRKTAAKPAKKDFAGGTIAEFSKEDDLKAYREMLLIRRFEEKAGQLYGMGFIGG 64 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL IGQEAV+VGM+++L EGDQ+IT YR+HGH+LACG+ A +MAELTGR+GG+SKGK Sbjct: 65 FCHLYIGQEAVVVGMQLALKEGDQVITGYRDHGHMLACGMSARGVMAELTGRRGGLSKGK 124 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR +D + + FGDGAANQGQVYES Sbjct: 125 GGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRGNDNVSLAYFGDGAANQGQVYES 184 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+AALW L VIY++ENN+YAMGTSVSRASAQT+FS+RG SF IPG QVDGMD+RAVKA Sbjct: 185 FNMAALWKLPVIYIVENNRYAMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKAA 244 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 D+AV +CR+ KGPII+EMLTYRYRGHSMSDPA YR+++E+ +MRS HDPIEQV+ RL Sbjct: 245 ADEAVEHCRSGKGPIILEMLTYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVKARLTD 304 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LK+I+ VR I+ +S +FAQSD EPD +ELY+DIL+ Sbjct: 305 KGWATEDELKQIDKEVRDIVADSADFAQSDPEPDVSELYTDILL 348 >gi|85716522|ref|ZP_01047493.1| dehydrogenase, E1 component [Nitrobacter sp. Nb-311A] gi|85696711|gb|EAQ34598.1| dehydrogenase, E1 component [Nitrobacter sp. Nb-311A] Length = 340 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 223/316 (70%), Positives = 270/316 (85%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F +EQEL A R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEA++VGM+M+L EGDQ+I Sbjct: 24 FTREQELHALREMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAIVVGMQMALEEGDQVI 83 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HGH+LACG+DA +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGAQVSL Sbjct: 84 TGYRDHGHMLACGMDAKGVMAELTGRRGGYSRGKGGSMHMFSKEKHFYGGHGIVGAQVSL 143 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTG+AFAN+YR +D++ + FGDGAANQGQVYESFN+A LW L V+Y+IENN+YAMGTSV Sbjct: 144 GTGLAFANRYRGNDRVSLTYFGDGAANQGQVYESFNMAELWKLPVVYIIENNRYAMGTSV 203 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +R+SAQT+FSKRG+SF+IPG Q+DGMD+RAVKA DKAV +CR GP I+EM TYRYRG Sbjct: 204 ARSSAQTDFSKRGMSFDIPGEQIDGMDVRAVKAAGDKAVKWCREGNGPYILEMQTYRYRG 263 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTREE++++R + DPIEQVR RLL K SE DLK+I+ R+I+N + +F Sbjct: 264 HSMSDPAKYRTREEVDKVRHDQDPIEQVRNRLLAAK-VSEDDLKKIDAEAREIVNTAADF 322 Query: 347 AQSDKEPDPAELYSDI 362 AQ+D EPD +ELY+DI Sbjct: 323 AQNDPEPDASELYTDI 338 >gi|114704544|ref|ZP_01437452.1| pyruvate dehydrogenase alpha2 subunit protein [Fulvimarina pelagi HTCC2506] gi|114539329|gb|EAU42449.1| pyruvate dehydrogenase alpha2 subunit protein [Fulvimarina pelagi HTCC2506] Length = 379 Score = 484 bits (1247), Expect = e-135, Method: Compositional matrix adjust. Identities = 226/350 (64%), Positives = 283/350 (80%), Gaps = 7/350 (2%) Query: 20 SVSAKRAATSSVDCVD----IPFLEGF---EVSEFNKEQELSAYRLMLLIRRFEEKAGQL 72 S AK +VD + LE F E ++F+KE+EL AYR MLLIRRFEEKAGQL Sbjct: 20 STRAKSTEKKTVDTESGKEIVRTLEDFSTPEPADFSKEEELRAYRDMLLIRRFEEKAGQL 79 Query: 73 YGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR 132 YGMG +GGFCHL IGQEAV+VGM+MS+ EGDQ++T YR+HGH+LA G++A +MAELTGR Sbjct: 80 YGMGFIGGFCHLYIGQEAVVVGMQMSMKEGDQVVTGYRDHGHMLATGMEARGVMAELTGR 139 Query: 133 QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAA 192 + G SKGKGGSMHMFS + FYGGHGIVGAQV +G+G+AFANKY +D + + FGDGAA Sbjct: 140 RSGYSKGKGGSMHMFSKEKKFYGGHGIVGAQVPIGSGLAFANKYNGTDAVSITYFGDGAA 199 Query: 193 NQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 NQGQVYESFN+A+LW L IYVIENN+YAMGTSVSRASA+T+FS RG+SF IPG+QVDGM Sbjct: 200 NQGQVYESFNMASLWKLPAIYVIENNRYAMGTSVSRASAETDFSHRGLSFKIPGIQVDGM 259 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIE 312 D+RAVKA D AV +CR+ +GPII+EM+TYRYRGHSMSDPA YR+R+E+ +MRS DPIE Sbjct: 260 DVRAVKAAGDMAVEHCRSGEGPIILEMMTYRYRGHSMSDPAKYRSRDEVQKMRSESDPIE 319 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 QV+KRL N SE ++K+I+ VR+I+ ++ +FAQ+D EPDP+EL++D+ Sbjct: 320 QVKKRLTENHNMSEDEVKKIDKEVREIVADAADFAQNDPEPDPSELWTDV 369 >gi|75676010|ref|YP_318431.1| dehydrogenase, E1 component [Nitrobacter winogradskyi Nb-255] gi|74420880|gb|ABA05079.1| dehydrogenase, E1 component [Nitrobacter winogradskyi Nb-255] Length = 342 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 223/316 (70%), Positives = 271/316 (85%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F +EQ+L A R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEA++VGM+M+L EGDQ+I Sbjct: 26 FTREQDLHALREMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAIVVGMQMALGEGDQVI 85 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HGH+LACG+DA +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGAQVSL Sbjct: 86 TGYRDHGHMLACGMDAKGVMAELTGRRGGYSRGKGGSMHMFSKEKHFYGGHGIVGAQVSL 145 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTG+AFAN+YR +D++ + FGDGAANQGQVYESFN+A LW L V+Y+IENN+YAMGTSV Sbjct: 146 GTGLAFANRYRGNDRVSLTYFGDGAANQGQVYESFNMAQLWKLPVVYIIENNRYAMGTSV 205 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +R+SAQ +FS+RGVSF+IPG QVDGMD+RAVKA DKAV +CR GP I+EM TYRYRG Sbjct: 206 ARSSAQIDFSRRGVSFDIPGEQVDGMDVRAVKAAGDKAVKWCREGNGPYILEMQTYRYRG 265 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTREE++++R + DPIEQVR RLL +K SE +LK+I+ VR+IIN + +F Sbjct: 266 HSMSDPAKYRTREEVDKVRHDQDPIEQVRNRLLASK-VSEDELKKIDAKVREIINTAADF 324 Query: 347 AQSDKEPDPAELYSDI 362 AQ+D EPD +ELY+DI Sbjct: 325 AQNDPEPDASELYTDI 340 >gi|327189241|gb|EGE56420.1| pyruvate dehydrogenase (acetyl-transferring) protein, alpha subunit [Rhizobium etli CNPAF512] Length = 348 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 219/324 (67%), Positives = 272/324 (83%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V++F++++EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 25 GGPVADFDRDEELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAQK 84 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 EGDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GKGGSMHMFS + FYGGHGIV Sbjct: 85 EGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGKGGSMHMFSKEKHFYGGHGIV 144 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN YR + + + FGDGAANQGQVYE FN+AALW L ++Y++ENN+Y Sbjct: 145 GAQVSLGTGLAFANHYRGNGNVSIAYFGDGAANQGQVYECFNMAALWKLPIVYIVENNRY 204 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS +RA+AQ+N+S RG F IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EML Sbjct: 205 AMGTSTARATAQSNYSLRGSGFGIPGIQVDGMDVRAVKAAADEALEHCRSGKGPIILEML 264 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YRT+EE+ +MRS DPIEQV+ RL+ WASE DLK I+ +VR I+ Sbjct: 265 TYRYRGHSMSDPAKYRTKEEVQKMRSEQDPIEQVKARLIEKGWASEDDLKAIDKDVRDIV 324 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +S +FAQ+D EPD +ELY+DIL+ Sbjct: 325 ADSADFAQADPEPDASELYTDILL 348 >gi|209885407|ref|YP_002289264.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Oligotropha carboxidovorans OM5] gi|209873603|gb|ACI93399.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Oligotropha carboxidovorans OM5] Length = 339 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 228/345 (66%), Positives = 276/345 (80%), Gaps = 12/345 (3%) Query: 18 NPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 PS +A + AT++ + EF KEQEL+A R MLLIRRFEEKAGQLYGMG Sbjct: 5 KPSAAATKGATANATKL-----------EFTKEQELTALRDMLLIRRFEEKAGQLYGMGA 53 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 +GGFCHL IGQEAV+VGM+M L EGDQ+IT YR+HGH+LA G+D +MAELTGR+ G S Sbjct: 54 IGGFCHLYIGQEAVVVGMQMVLKEGDQVITGYRDHGHMLATGMDPKGVMAELTGRRSGYS 113 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHMFS + FYGGHGIVGAQV LGTG+AFAN+YR +D + + FGDGAANQGQV Sbjct: 114 KGKGGSMHMFSKEKHFYGGHGIVGAQVPLGTGLAFANRYRGNDNVAIAYFGDGAANQGQV 173 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 YESFN+A LW L V+YVIENN+YAMGT+V+RASAQT+FSKRG SFNIPG QVDGMD+RAV Sbjct: 174 YESFNMAELWKLPVVYVIENNRYAMGTAVTRASAQTDFSKRGASFNIPGEQVDGMDVRAV 233 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 +A ++AV +CR KGP I+EM TYRYRGHSMSDPA YRTREE+ ++R + DPIEQVRKR Sbjct: 234 RAAGERAVGWCREGKGPFILEMQTYRYRGHSMSDPAKYRTREEVEKVRHDQDPIEQVRKR 293 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 LL K E +LK+I+ VR+I+N++ +FAQ D EPD +ELY+D+ Sbjct: 294 LLAAK-VDEAELKKIDAEVREIVNDAADFAQHDPEPDVSELYTDV 337 >gi|209549202|ref|YP_002281119.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534958|gb|ACI54893.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 348 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 217/324 (66%), Positives = 272/324 (83%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V++F++++EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 25 GGPVADFDRDEELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAQK 84 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 EGDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GKGGSMHMFS + FYGGHGIV Sbjct: 85 EGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGKGGSMHMFSKEKHFYGGHGIV 144 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN YR + + + FGDGAANQGQVYESFN+AALW L ++Y++ENN+Y Sbjct: 145 GAQVSLGTGLAFANHYRGNGNVSIAYFGDGAANQGQVYESFNMAALWKLPIVYIVENNRY 204 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS +RA+AQ+N+S RG F IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EML Sbjct: 205 AMGTSTARATAQSNYSLRGSGFGIPGIQVDGMDVRAVKAAADEALEHCRSGKGPIILEML 264 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YR++EE+ +MRS DPIEQV+ RL+ WASE DLK I+ ++R I+ Sbjct: 265 TYRYRGHSMSDPAKYRSKEEVQKMRSEQDPIEQVKARLIEKGWASEDDLKAIDKDIRDIV 324 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +S +FAQ+D EPD + LY+DIL+ Sbjct: 325 ADSADFAQADPEPDASALYTDILL 348 >gi|316933973|ref|YP_004108955.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Rhodopseudomonas palustris DX-1] gi|315601687|gb|ADU44222.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhodopseudomonas palustris DX-1] Length = 344 Score = 481 bits (1239), Expect = e-134, Method: Compositional matrix adjust. Identities = 233/319 (73%), Positives = 275/319 (86%), Gaps = 1/319 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V F+KEQEL A+R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+L EGD Sbjct: 25 VPPFSKEQELGAFREMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAVVVGMQMALREGD 84 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q+IT YR+HGH+LACG+DA+ +MAELTGR+GG SKGKGGSMHMFS + F+GGHGIVGAQ Sbjct: 85 QVITGYRDHGHMLACGMDANGVMAELTGRRGGYSKGKGGSMHMFSREKSFFGGHGIVGAQ 144 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTGIAFAN+YR ++C+ FGDGAANQGQVYESFN+A LW L V+YVIENN+YAMG Sbjct: 145 VSLGTGIAFANRYRGDGRVCLAYFGDGAANQGQVYESFNMAELWKLPVVYVIENNRYAMG 204 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV+R+SAQT+FSKRGVSFNIPG QVDGMD+RAVKA DKAVA+CRA GP I+EM TYR Sbjct: 205 TSVTRSSAQTDFSKRGVSFNIPGEQVDGMDVRAVKAAGDKAVAHCRAGNGPFILEMQTYR 264 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR+REE++++R++ DPIEQVRKRLL E DLK I+ VRK++N S Sbjct: 265 YRGHSMSDPAKYRSREEVDKIRNDQDPIEQVRKRLLALDMTEE-DLKAIDAEVRKVVNES 323 Query: 344 VEFAQSDKEPDPAELYSDI 362 +FAQ D EPDP+ELY+D+ Sbjct: 324 ADFAQHDPEPDPSELYTDV 342 >gi|86749888|ref|YP_486384.1| pyruvate dehydrogenase alpha subunit [Rhodopseudomonas palustris HaA2] gi|86572916|gb|ABD07473.1| Pyruvate dehydrogenase alpha subunit [Rhodopseudomonas palustris HaA2] Length = 344 Score = 481 bits (1238), Expect = e-134, Method: Compositional matrix adjust. Identities = 237/344 (68%), Positives = 284/344 (82%), Gaps = 5/344 (1%) Query: 19 PSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMV 78 P SA + A D P V +F+KEQEL A+R MLLIRRFEEKAGQLYGMG + Sbjct: 4 PKKSAAKEAGQDKD----PAPNKPRVPDFSKEQELRAFRDMLLIRRFEEKAGQLYGMGAI 59 Query: 79 GGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK 138 GGFCHL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LAC +DA +MAELTGR+GG SK Sbjct: 60 GGFCHLYIGQEAVVVGMQMALREGDQVITGYRDHGHMLACDMDAKGVMAELTGRRGGYSK 119 Query: 139 GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 GKGGSMHMFS + FYGGHGIVGAQVSLGTGIAFAN+YR + +C+ FGDGA+NQGQVY Sbjct: 120 GKGGSMHMFSMEKHFYGGHGIVGAQVSLGTGIAFANRYRDNGSVCLAYFGDGASNQGQVY 179 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 ESFN+A LW L V+YVIENN+YAMGTSV+R+SAQT+FSKRG+SFNIPG QVDGMD+RAVK Sbjct: 180 ESFNMAELWKLPVVYVIENNRYAMGTSVTRSSAQTDFSKRGISFNIPGEQVDGMDVRAVK 239 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 A DKAVA+CRA GP I+EM TYRYRGHSMSDPA YRTREE++++R++ DPIEQVR+RL Sbjct: 240 AAGDKAVAHCRAGNGPYILEMQTYRYRGHSMSDPAKYRTREEVDKIRNDQDPIEQVRQRL 299 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 L +E DLK+I+ +RKI+N + +FAQ+D EPDPAELY+D+ Sbjct: 300 LGQDM-TEDDLKKIDAEIRKIVNEAADFAQNDPEPDPAELYTDV 342 >gi|192291582|ref|YP_001992187.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhodopseudomonas palustris TIE-1] gi|192285331|gb|ACF01712.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhodopseudomonas palustris TIE-1] Length = 344 Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust. Identities = 232/319 (72%), Positives = 275/319 (86%), Gaps = 1/319 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V F KEQEL A+R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+L EGD Sbjct: 25 VPPFTKEQELGAFREMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAVVVGMQMALREGD 84 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q+IT YR+HGH+LACG+DA+ +MAELTGR+GG SKGKGGSMHMFS + F+GGHGIVGAQ Sbjct: 85 QVITGYRDHGHMLACGMDANGVMAELTGRRGGYSKGKGGSMHMFSREKSFFGGHGIVGAQ 144 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTGIAFAN+YR ++C+ FGDGAANQGQVYESFN+A LW L V+YVIENN+YAMG Sbjct: 145 VSLGTGIAFANRYRGDGRVCLAYFGDGAANQGQVYESFNMAELWKLPVVYVIENNRYAMG 204 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV+R+SAQT+FSKRGVSFNIPG QVDGMD+RAVKA DKAVA+CRA GP I+EM TYR Sbjct: 205 TSVTRSSAQTDFSKRGVSFNIPGEQVDGMDVRAVKAAGDKAVAHCRAGNGPFILEMQTYR 264 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR+REE++++R++ DPIEQVRKRLL +E DLK I+ VRK++N S Sbjct: 265 YRGHSMSDPAKYRSREEVDKIRNDQDPIEQVRKRLLGLDM-TEDDLKAIDAEVRKVVNES 323 Query: 344 VEFAQSDKEPDPAELYSDI 362 +FAQ D EPDP+E+Y+D+ Sbjct: 324 ADFAQHDPEPDPSEVYTDV 342 >gi|91977282|ref|YP_569941.1| pyruvate dehydrogenase (lipoamide) [Rhodopseudomonas palustris BisB5] gi|91683738|gb|ABE40040.1| Pyruvate dehydrogenase (lipoamide) [Rhodopseudomonas palustris BisB5] Length = 344 Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust. Identities = 232/320 (72%), Positives = 278/320 (86%), Gaps = 1/320 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 +V +F KEQEL A+R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+L EG Sbjct: 24 KVPDFTKEQELHAFRDMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAVVVGMQMALREG 83 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 DQ+IT YR+HGH+LAC +DA +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGA Sbjct: 84 DQVITGYRDHGHMLACEMDAKGVMAELTGRRGGYSKGKGGSMHMFSMEKHFYGGHGIVGA 143 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QVSLGTGIAFAN+YR + +C+ FGDGA+NQGQVYESFN+A LW L V+YVIENN+YAM Sbjct: 144 QVSLGTGIAFANRYRDNGSVCLAYFGDGASNQGQVYESFNMAELWKLPVVYVIENNRYAM 203 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV+R+SAQT+FSKRGVSFNIPG QVDGMD+RAVKA DKAVA+CRA GP I+EM TY Sbjct: 204 GTSVTRSSAQTDFSKRGVSFNIPGEQVDGMDVRAVKAAGDKAVAHCRAGNGPYILEMQTY 263 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDPA YRTREE++++R++ DPIEQVR+RLL + +E DLK+I+ VRKI+N Sbjct: 264 RYRGHSMSDPAKYRTREEVDKIRNDQDPIEQVRQRLLGSDM-TEDDLKKIDAEVRKIVNE 322 Query: 343 SVEFAQSDKEPDPAELYSDI 362 + +FAQ+D EPDP+ELY+D+ Sbjct: 323 AADFAQNDPEPDPSELYTDV 342 >gi|256061212|ref|ZP_05451364.1| dehydrogenase E1 component [Brucella neotomae 5K33] gi|261325220|ref|ZP_05964417.1| dehydrogenase E1 component [Brucella neotomae 5K33] gi|261301200|gb|EEY04697.1| dehydrogenase E1 component [Brucella neotomae 5K33] Length = 346 Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust. Identities = 230/342 (67%), Positives = 282/342 (82%), Gaps = 5/342 (1%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 A + SSV+ P + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +GGFC Sbjct: 10 AGKTQASSVNAPKAP-----SPANFDKKQELEAYREMLLIRRFEEKAGQLYGMGFIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LA G+ A +MAELTGR+GG+SKGKGG Sbjct: 65 HLYIGQEAVVVGMQMALQEGDQVITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQVSLGTG+AFAN YR + + + FGDGAANQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A+LW L VIYVIENN+YAMGT+VSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA D Sbjct: 185 MASLWKLPVIYVIENNRYAMGTAVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKAAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 A + R+ KGPII+EMLTYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ Sbjct: 245 LATEWARSGKGPIILEMLTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLIEKG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LKEI+ VR I+ ++ +FA++D EPD +ELY+DIL+ Sbjct: 305 WATEEELKEIDREVRDIVADAADFAENDPEPDASELYTDILL 346 >gi|146341016|ref|YP_001206064.1| pyruvate dehydrogenase E1 component subunit alpha [Bradyrhizobium sp. ORS278] gi|146193822|emb|CAL77839.1| Pyruvate dehydrogenase E1 component, alpha subunit [Bradyrhizobium sp. ORS278] Length = 340 Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust. Identities = 233/317 (73%), Positives = 272/317 (85%), Gaps = 1/317 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 EF KEQEL+A R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+L +GDQ+ Sbjct: 23 EFTKEQELAALRDMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAVVVGMQMALKQGDQV 82 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT YR+HGH+LA G+DA +MAELTGR+GG SKGKGGSMHMFS + F+GGHGIVGAQVS Sbjct: 83 ITGYRDHGHMLATGMDAKGVMAELTGRRGGYSKGKGGSMHMFSMEKNFFGGHGIVGAQVS 142 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTG+A AN+YR +D + V FGDGAANQGQVYESFN+A LW L VIYVIENN+YAMGT+ Sbjct: 143 LGTGLALANRYRGNDSVSVAYFGDGAANQGQVYESFNMAELWKLPVIYVIENNRYAMGTA 202 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 VSRASAQT+FSKRG+SFNIPG QVDGMD+RAVKA +KAVA+CR KGP I+EM TYRYR Sbjct: 203 VSRASAQTDFSKRGLSFNIPGEQVDGMDVRAVKAAGEKAVAWCREGKGPFILEMQTYRYR 262 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YRTREE+ ++R + DPIEQVR RLL K SE DLK I+ +VRKI+N + + Sbjct: 263 GHSMSDPAKYRTREEVEKVRHDQDPIEQVRNRLLAAK-VSEQDLKAIDADVRKIVNEAAD 321 Query: 346 FAQSDKEPDPAELYSDI 362 FAQ+D EPDPAELY+D+ Sbjct: 322 FAQADPEPDPAELYTDV 338 >gi|62290042|ref|YP_221835.1| pyruvate dehydrogenase complex, E1 component subunit alpha [Brucella abortus bv. 1 str. 9-941] gi|82699969|ref|YP_414543.1| dehydrogenase, E1 component:mitochondrial substrate carrier [Brucella melitensis biovar Abortus 2308] gi|148559462|ref|YP_001259050.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Brucella ovis ATCC 25840] gi|189024283|ref|YP_001935051.1| Dehydrogenase, E1 component [Brucella abortus S19] gi|225627599|ref|ZP_03785636.1| dehydrogenase E1 component [Brucella ceti str. Cudo] gi|225852629|ref|YP_002732862.1| dehydrogenase E1 component [Brucella melitensis ATCC 23457] gi|237815552|ref|ZP_04594549.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella abortus str. 2308 A] gi|254689355|ref|ZP_05152609.1| dehydrogenase E1 component [Brucella abortus bv. 6 str. 870] gi|254693839|ref|ZP_05155667.1| dehydrogenase E1 component [Brucella abortus bv. 3 str. Tulya] gi|254697488|ref|ZP_05159316.1| dehydrogenase E1 component [Brucella abortus bv. 2 str. 86/8/59] gi|254706686|ref|ZP_05168514.1| dehydrogenase E1 component [Brucella pinnipedialis M163/99/10] gi|254710206|ref|ZP_05172017.1| dehydrogenase E1 component [Brucella pinnipedialis B2/94] gi|254714203|ref|ZP_05176014.1| dehydrogenase E1 component [Brucella ceti M644/93/1] gi|254717638|ref|ZP_05179449.1| dehydrogenase E1 component [Brucella ceti M13/05/1] gi|254730385|ref|ZP_05188963.1| dehydrogenase E1 component [Brucella abortus bv. 4 str. 292] gi|256031700|ref|ZP_05445314.1| dehydrogenase E1 component [Brucella pinnipedialis M292/94/1] gi|256113685|ref|ZP_05454496.1| dehydrogenase E1 component [Brucella melitensis bv. 3 str. Ether] gi|256159855|ref|ZP_05457588.1| dehydrogenase E1 component [Brucella ceti M490/95/1] gi|256255101|ref|ZP_05460637.1| dehydrogenase E1 component [Brucella ceti B1/94] gi|256257601|ref|ZP_05463137.1| dehydrogenase E1 component [Brucella abortus bv. 9 str. C68] gi|256263878|ref|ZP_05466410.1| dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|260168832|ref|ZP_05755643.1| dehydrogenase E1 component [Brucella sp. F5/99] gi|260546595|ref|ZP_05822334.1| dehydrogenase [Brucella abortus NCTC 8038] gi|260754872|ref|ZP_05867220.1| dehydrogenase E1 component [Brucella abortus bv. 6 str. 870] gi|260758089|ref|ZP_05870437.1| dehydrogenase E1 component [Brucella abortus bv. 4 str. 292] gi|260761913|ref|ZP_05874256.1| dehydrogenase E1 component [Brucella abortus bv. 2 str. 86/8/59] gi|260883884|ref|ZP_05895498.1| dehydrogenase E1 component [Brucella abortus bv. 9 str. C68] gi|261214123|ref|ZP_05928404.1| dehydrogenase E1 component [Brucella abortus bv. 3 str. Tulya] gi|261219477|ref|ZP_05933758.1| dehydrogenase E1 component [Brucella ceti M13/05/1] gi|261222296|ref|ZP_05936577.1| dehydrogenase E1 component [Brucella ceti B1/94] gi|261314147|ref|ZP_05953344.1| dehydrogenase E1 component [Brucella pinnipedialis M163/99/10] gi|261317764|ref|ZP_05956961.1| dehydrogenase E1 component [Brucella pinnipedialis B2/94] gi|261321973|ref|ZP_05961170.1| dehydrogenase E1 component [Brucella ceti M644/93/1] gi|261758320|ref|ZP_06002029.1| dehydrogenase [Brucella sp. F5/99] gi|265988795|ref|ZP_06101352.1| dehydrogenase E1 component [Brucella pinnipedialis M292/94/1] gi|265995046|ref|ZP_06107603.1| dehydrogenase E1 component [Brucella melitensis bv. 3 str. Ether] gi|265998260|ref|ZP_06110817.1| dehydrogenase E1 component [Brucella ceti M490/95/1] gi|294852467|ref|ZP_06793140.1| pyruvate dehydrogenase E1 component [Brucella sp. NVSL 07-0026] gi|297248443|ref|ZP_06932161.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella abortus bv. 5 str. B3196] gi|306841855|ref|ZP_07474537.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella sp. BO2] gi|306843994|ref|ZP_07476589.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella sp. BO1] gi|62196174|gb|AAX74474.1| PdhA, pyruvate dehydrogenase complex, E1 component, alpha subunit [Brucella abortus bv. 1 str. 9-941] gi|82616070|emb|CAJ11108.1| Dehydrogenase, E1 component:Mitochondrial substrate carrier [Brucella melitensis biovar Abortus 2308] gi|148370719|gb|ABQ60698.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella ovis ATCC 25840] gi|189019855|gb|ACD72577.1| Dehydrogenase, E1 component [Brucella abortus S19] gi|225617604|gb|EEH14649.1| dehydrogenase E1 component [Brucella ceti str. Cudo] gi|225640994|gb|ACO00908.1| dehydrogenase E1 component [Brucella melitensis ATCC 23457] gi|237788850|gb|EEP63061.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella abortus str. 2308 A] gi|260095645|gb|EEW79522.1| dehydrogenase [Brucella abortus NCTC 8038] gi|260668407|gb|EEX55347.1| dehydrogenase E1 component [Brucella abortus bv. 4 str. 292] gi|260672345|gb|EEX59166.1| dehydrogenase E1 component [Brucella abortus bv. 2 str. 86/8/59] gi|260674980|gb|EEX61801.1| dehydrogenase E1 component [Brucella abortus bv. 6 str. 870] gi|260873412|gb|EEX80481.1| dehydrogenase E1 component [Brucella abortus bv. 9 str. C68] gi|260915730|gb|EEX82591.1| dehydrogenase E1 component [Brucella abortus bv. 3 str. Tulya] gi|260920880|gb|EEX87533.1| dehydrogenase E1 component [Brucella ceti B1/94] gi|260924566|gb|EEX91134.1| dehydrogenase E1 component [Brucella ceti M13/05/1] gi|261294663|gb|EEX98159.1| dehydrogenase E1 component [Brucella ceti M644/93/1] gi|261296987|gb|EEY00484.1| dehydrogenase E1 component [Brucella pinnipedialis B2/94] gi|261303173|gb|EEY06670.1| dehydrogenase E1 component [Brucella pinnipedialis M163/99/10] gi|261738304|gb|EEY26300.1| dehydrogenase [Brucella sp. F5/99] gi|262552728|gb|EEZ08718.1| dehydrogenase E1 component [Brucella ceti M490/95/1] gi|262766159|gb|EEZ11948.1| dehydrogenase E1 component [Brucella melitensis bv. 3 str. Ether] gi|263094009|gb|EEZ17943.1| dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|264660992|gb|EEZ31253.1| dehydrogenase E1 component [Brucella pinnipedialis M292/94/1] gi|294821056|gb|EFG38055.1| pyruvate dehydrogenase E1 component [Brucella sp. NVSL 07-0026] gi|297175612|gb|EFH34959.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella abortus bv. 5 str. B3196] gi|306275749|gb|EFM57473.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella sp. BO1] gi|306288082|gb|EFM59479.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella sp. BO2] gi|326409148|gb|ADZ66213.1| Dehydrogenase, E1 component [Brucella melitensis M28] Length = 346 Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust. Identities = 230/342 (67%), Positives = 281/342 (82%), Gaps = 5/342 (1%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 A + SSV+ P + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +GGFC Sbjct: 10 AGKTQASSVNAPKAP-----SPANFDKKQELEAYREMLLIRRFEEKAGQLYGMGFIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LA G+ A +MAELTGR+GG+SKGKGG Sbjct: 65 HLYIGQEAVVVGMQMALQEGDQVITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQVSLGTG+AFAN YR + + + FGDGAANQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A+LW L VIYVIENN+YAMGT+VSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA D Sbjct: 185 MASLWKLPVIYVIENNRYAMGTAVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKAAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 A + R+ KGPII+EMLTYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ Sbjct: 245 LATEWARSGKGPIILEMLTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLIEKG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LKEI+ VR I+ ++ +FA+ D EPD +ELY+DIL+ Sbjct: 305 WATEEELKEIDREVRDIVADAADFAEHDPEPDASELYTDILL 346 >gi|254719193|ref|ZP_05181004.1| dehydrogenase E1 component [Brucella sp. 83/13] gi|265984190|ref|ZP_06096925.1| dehydrogenase E1 component [Brucella sp. 83/13] gi|306838186|ref|ZP_07471042.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella sp. NF 2653] gi|264662782|gb|EEZ33043.1| dehydrogenase E1 component [Brucella sp. 83/13] gi|306406776|gb|EFM62999.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella sp. NF 2653] Length = 346 Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust. Identities = 230/342 (67%), Positives = 281/342 (82%), Gaps = 5/342 (1%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 A + SSV+ P + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +GGFC Sbjct: 10 AGKTQASSVNAPKAP-----SPANFDKKQELEAYRKMLLIRRFEEKAGQLYGMGFIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LA G+ A +MAELTGR+GG+SKGKGG Sbjct: 65 HLYIGQEAVVVGMQMALQEGDQVITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQVSLGTG+AFAN YR + + + FGDGAANQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A+LW L VIYVIENN+YAMGT+VSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA D Sbjct: 185 MASLWKLPVIYVIENNRYAMGTAVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKAAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 A + R+ KGPII+EMLTYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ Sbjct: 245 LATEWARSGKGPIILEMLTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLIEKG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LKEI+ VR I+ ++ +FA+ D EPD +ELY+DIL+ Sbjct: 305 WATEEELKEIDREVRDIVADAADFAEHDPEPDASELYTDILL 346 >gi|148255820|ref|YP_001240405.1| pyruvate dehydrogenase E1 component subunit alpha [Bradyrhizobium sp. BTAi1] gi|146407993|gb|ABQ36499.1| Pyruvate dehydrogenase E1 component, alpha subunit [Bradyrhizobium sp. BTAi1] Length = 340 Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust. Identities = 233/317 (73%), Positives = 272/317 (85%), Gaps = 1/317 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 EF +EQEL+A R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+L EGDQ+ Sbjct: 23 EFTREQELAALRDMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAVVVGMQMALKEGDQV 82 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT YR+HGH+LACG+DA +MAELTGR+GG SKGKGGSMHMFS + F+GGHGIVGAQVS Sbjct: 83 ITGYRDHGHMLACGMDAKGVMAELTGRRGGYSKGKGGSMHMFSMEKNFFGGHGIVGAQVS 142 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTG+A AN+YR +D + V FGDGAANQGQVYESFN+A LW L VIYVIENN+YAMGT+ Sbjct: 143 LGTGLALANRYRGNDSVSVAYFGDGAANQGQVYESFNMAELWKLPVIYVIENNRYAMGTA 202 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 VSRASAQT+FSKRG+SFNIPG QVDGMD+RAVKA +KAVA+CR KGP I+EM TYRYR Sbjct: 203 VSRASAQTDFSKRGISFNIPGEQVDGMDVRAVKAAGEKAVAWCREGKGPYILEMQTYRYR 262 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YRTREE+ ++R + DPIEQVR RLL K SE DLK I+ +VRKI+N + + Sbjct: 263 GHSMSDPAKYRTREEVEKVRHDQDPIEQVRNRLLAAK-VSEQDLKAIDADVRKIVNEAAD 321 Query: 346 FAQSDKEPDPAELYSDI 362 FAQ+D EPD AELY+D+ Sbjct: 322 FAQADPEPDAAELYTDV 338 >gi|17987137|ref|NP_539771.1| pyruvate dehydrogenase E1 component, alpha subunit [Brucella melitensis bv. 1 str. 16M] gi|256044786|ref|ZP_05447690.1| pyruvate dehydrogenase E1 component, alpha subunit [Brucella melitensis bv. 1 str. Rev.1] gi|260565611|ref|ZP_05836095.1| dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|265991210|ref|ZP_06103767.1| dehydrogenase E1 component [Brucella melitensis bv. 1 str. Rev.1] gi|17982801|gb|AAL52035.1| pyruvate dehydrogenase e1 component, alpha subunit [Brucella melitensis bv. 1 str. 16M] gi|260151679|gb|EEW86773.1| dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|263001994|gb|EEZ14569.1| dehydrogenase E1 component [Brucella melitensis bv. 1 str. Rev.1] Length = 346 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 229/342 (66%), Positives = 281/342 (82%), Gaps = 5/342 (1%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 A + SSV+ P + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +GGFC Sbjct: 10 AGKTQASSVNAPKAP-----SPANFDKKQELEAYREMLLIRRFEEKAGQLYGMGFIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LA G+ A +MAELTGR+GG+SKGKGG Sbjct: 65 HLYIGQEAVVVGMQMALQEGDQVITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQVSLGTG+AFAN YR + + + FGDGAANQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A+LW L VIYVIENN+YAMGT+VSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA D Sbjct: 185 MASLWKLPVIYVIENNRYAMGTAVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKAAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 A + R+ +GPII+EMLTYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ Sbjct: 245 LATEWARSGRGPIILEMLTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLIEKG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LKEI+ VR I+ ++ +FA+ D EPD +ELY+DIL+ Sbjct: 305 WATEEELKEIDREVRDIVADAADFAEHDPEPDASELYTDILL 346 >gi|39935932|ref|NP_948208.1| pyruvate dehydrogenase E1 subunit alpha [Rhodopseudomonas palustris CGA009] gi|39649786|emb|CAE28308.1| pyruvate dehydrogenase E1 alpha subunit [Rhodopseudomonas palustris CGA009] Length = 344 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 231/319 (72%), Positives = 274/319 (85%), Gaps = 1/319 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V F KEQEL A+ MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+L EGD Sbjct: 25 VPPFTKEQELGAFLEMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAVVVGMQMALREGD 84 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q+IT YR+HGH+LACG++A+ +MAELTGR+GG SKGKGGSMHMFS + F+GGHGIVGAQ Sbjct: 85 QVITGYRDHGHMLACGMEANGVMAELTGRRGGYSKGKGGSMHMFSREKSFFGGHGIVGAQ 144 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTGIAFAN+YR ++C+ FGDGAANQGQVYESFN+A LW L V+YVIENN+YAMG Sbjct: 145 VSLGTGIAFANRYRGDGRVCLAYFGDGAANQGQVYESFNMAELWKLPVVYVIENNRYAMG 204 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV+R+SAQT+FSKRGVSFNIPG QVDGMD+RAVKA DKAVA+CRA GP I+EM TYR Sbjct: 205 TSVTRSSAQTDFSKRGVSFNIPGEQVDGMDVRAVKAAGDKAVAHCRAGNGPFILEMQTYR 264 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR+REE++++R++ DPIEQVRKRLL +E DLK I+ VRK++N S Sbjct: 265 YRGHSMSDPAKYRSREEVDKIRNDQDPIEQVRKRLLGLDM-TEDDLKAIDAEVRKVVNES 323 Query: 344 VEFAQSDKEPDPAELYSDI 362 +FAQ D EPDP+ELY+D+ Sbjct: 324 ADFAQHDLEPDPSELYTDV 342 >gi|254701872|ref|ZP_05163700.1| dehydrogenase E1 component [Brucella suis bv. 5 str. 513] gi|261752435|ref|ZP_05996144.1| dehydrogenase E1 component [Brucella suis bv. 5 str. 513] gi|261742188|gb|EEY30114.1| dehydrogenase E1 component [Brucella suis bv. 5 str. 513] Length = 346 Score = 474 bits (1221), Expect = e-132, Method: Compositional matrix adjust. Identities = 229/342 (66%), Positives = 280/342 (81%), Gaps = 5/342 (1%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 A + SSV+ P + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +GGFC Sbjct: 10 AGKTQASSVNAPKAP-----SPANFDKKQELEAYREMLLIRRFEEKAGQLYGMGFIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LA G+ A +MAELTGR+GG+SKGKGG Sbjct: 65 HLYIGQEAVVVGMQMALQEGDQVITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQVSLGTG+AFAN YR + + + FGDGAANQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A+LW L VIYVIENN+YAMGT+VSR+SA+T+F KRG+SFNIPG+QVDGMD+RAVKA D Sbjct: 185 MASLWKLPVIYVIENNRYAMGTAVSRSSAETDFPKRGLSFNIPGIQVDGMDVRAVKAAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 A + R+ KGPII+EMLTYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ Sbjct: 245 LATEWARSGKGPIILEMLTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLIEKG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LKEI+ VR I+ ++ +FA+ D EPD +ELY+DIL+ Sbjct: 305 WATEEELKEIDREVRDIVADAADFAEHDPEPDASELYTDILL 346 >gi|90423989|ref|YP_532359.1| pyruvate dehydrogenase (lipoamide) [Rhodopseudomonas palustris BisB18] gi|90106003|gb|ABD88040.1| Pyruvate dehydrogenase (lipoamide) [Rhodopseudomonas palustris BisB18] Length = 347 Score = 474 bits (1221), Expect = e-132, Method: Compositional matrix adjust. Identities = 233/319 (73%), Positives = 274/319 (85%), Gaps = 1/319 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V EF+K+QEL A R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEA++VGM+M+L GD Sbjct: 28 VLEFSKDQELRALRDMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAIVVGMQMTLKLGD 87 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q+IT YR+HGH+LACG+DA +MAELTGRQGG SKGKGGSMHMFS + FYGGHGIVGAQ Sbjct: 88 QVITGYRDHGHMLACGMDAKGVMAELTGRQGGYSKGKGGSMHMFSKEKHFYGGHGIVGAQ 147 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTG+AFAN+YR +D + + FGDGA+NQGQVYESFN+A LW L V+YVIENN+YAMG Sbjct: 148 VSLGTGLAFANRYRGNDNVSLAYFGDGASNQGQVYESFNMAQLWKLPVVYVIENNRYAMG 207 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV R+SAQT+FSKRGVSFNIPG QVDGMD+RAVKA DKAVA+CRA GP I+EM TYR Sbjct: 208 TSVKRSSAQTDFSKRGVSFNIPGEQVDGMDVRAVKAAGDKAVAHCRAGNGPYILEMQTYR 267 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YRTREE++++RS+ DPIEQVR+RLL K SE +LK I+ VR+I+N + Sbjct: 268 YRGHSMSDPAKYRTREEVDKVRSDQDPIEQVRQRLLGLK-VSEQELKAIDAEVREIVNGA 326 Query: 344 VEFAQSDKEPDPAELYSDI 362 EFAQ D EP+PAELY+D+ Sbjct: 327 AEFAQHDPEPEPAELYTDV 345 >gi|256369555|ref|YP_003107065.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Brucella microti CCM 4915] gi|255999717|gb|ACU48116.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Brucella microti CCM 4915] Length = 346 Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust. Identities = 229/342 (66%), Positives = 280/342 (81%), Gaps = 5/342 (1%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 A + SSV+ P + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +GGFC Sbjct: 10 AGKTQASSVNAPKAP-----SPANFDKKQELEAYREMLLIRRFEEKAGQLYGMGFIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LA G+ A +MAELTGR+GG+SKGKGG Sbjct: 65 HLYIGQEAVVVGMQMALQEGDQVITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQVSLGTG+AFAN YR + + + FGDGAANQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A+LW L VIYVIENN+YAMGT+VSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA D Sbjct: 185 MASLWKLPVIYVIENNRYAMGTAVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKAAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 A + R+ KGPII+EMLTYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ Sbjct: 245 LATEWARSGKGPIILEMLTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLIEKG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 W +E +LKEI+ VR I+ ++ +FA+ D EPD +ELY+DIL+ Sbjct: 305 WVTEEELKEIDREVRDIVADAADFAEHDPEPDASELYTDILL 346 >gi|23502007|ref|NP_698134.1| pyruvate dehydrogenase complex, E1 component subunit alpha [Brucella suis 1330] gi|161619081|ref|YP_001592968.1| dehydrogenase E1 component [Brucella canis ATCC 23365] gi|163843396|ref|YP_001627800.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Brucella suis ATCC 23445] gi|254704418|ref|ZP_05166246.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Brucella suis bv. 3 str. 686] gi|260566335|ref|ZP_05836805.1| dehydrogenase [Brucella suis bv. 4 str. 40] gi|261755095|ref|ZP_05998804.1| dehydrogenase E1 component [Brucella suis bv. 3 str. 686] gi|23347958|gb|AAN30049.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Brucella suis 1330] gi|161335892|gb|ABX62197.1| dehydrogenase E1 component [Brucella canis ATCC 23365] gi|163674119|gb|ABY38230.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Brucella suis ATCC 23445] gi|260155853|gb|EEW90933.1| dehydrogenase [Brucella suis bv. 4 str. 40] gi|261744848|gb|EEY32774.1| dehydrogenase E1 component [Brucella suis bv. 3 str. 686] Length = 346 Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust. Identities = 229/342 (66%), Positives = 280/342 (81%), Gaps = 5/342 (1%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 A + SSV+ P + F+K+QEL AYR MLLIRRFEEKAGQLYGM +GGFC Sbjct: 10 AGKTQASSVNAPKAP-----SPANFDKKQELEAYREMLLIRRFEEKAGQLYGMSFIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LA G+ A +MAELTGR+GG+SKGKGG Sbjct: 65 HLYIGQEAVVVGMQMALQEGDQVITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQVSLGTG+AFAN YR + + + FGDGAANQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A+LW L VIYVIENN+YAMGT+VSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA D Sbjct: 185 MASLWKLPVIYVIENNRYAMGTAVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKAAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 A + R+ KGPII+EMLTYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ Sbjct: 245 LATEWARSGKGPIILEMLTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLIEKG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LKEI+ VR I+ ++ +FA+ D EPD +ELY+DIL+ Sbjct: 305 WATEEELKEIDREVRDIVADAADFAEHDPEPDASELYTDILL 346 >gi|13470619|ref|NP_102188.1| pyruvate dehydrogenase E1 alpha subunit [Mesorhizobium loti MAFF303099] gi|14021361|dbj|BAB47974.1| pyruvate dehydrogenase E1 alpha subunit [Mesorhizobium loti MAFF303099] Length = 345 Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust. Identities = 227/344 (65%), Positives = 280/344 (81%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 +A R A + L + +EF K++EL+AYR MLLIRRFEEKAGQLYGMG +GG Sbjct: 2 ATAARKAPAKSKSEGKSGLSAPKPAEFTKDEELAAYRHMLLIRRFEEKAGQLYGMGFIGG 61 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL IGQEAV+ GMKM+L +GDQMITAYR+HGH+LA + +MAELTGR+GG+SKGK Sbjct: 62 FCHLYIGQEAVVTGMKMALIDGDQMITAYRDHGHMLAMELSPRGVMAELTGRRGGLSKGK 121 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR ++ + + FGDGAANQGQVYES Sbjct: 122 GGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRDNNNVSLTYFGDGAANQGQVYES 181 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A+LW L VIY+IENN+YAMGTSVSR+SA+TNFS RG SF IPG+QVDGMD+RAVK+ Sbjct: 182 FNMASLWKLPVIYIIENNRYAMGTSVSRSSAETNFSHRGASFKIPGIQVDGMDVRAVKSA 241 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 D+A +CRA GPII+EM TYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL Sbjct: 242 GDQATEWCRAGNGPIILEMQTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKARLTE 301 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 KWA+E +LK I+ VR I+ ++ EFAQ+D EPDP+EL++DI++ Sbjct: 302 KKWATEDELKTIDKEVRDIVADAAEFAQNDAEPDPSELWTDIVL 345 >gi|326538856|gb|ADZ87071.1| dehydrogenase E1 component [Brucella melitensis M5-90] Length = 329 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 225/320 (70%), Positives = 274/320 (85%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+L EGDQ Sbjct: 10 ANFDKKQELEAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMALQEGDQ 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT YR+HGH+LA G+ A +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQV Sbjct: 70 VITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKGKGGSMHMFSKEKNFYGGHGIVGAQV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 SLGTG+AFAN YR + + + FGDGAANQGQVYESFN+A+LW L VIYVIENN+YAMGT Sbjct: 130 SLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYESFNMASLWKLPVIYVIENNRYAMGT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +VSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA D A + R+ KGPII+EMLTYRY Sbjct: 190 AVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKAAADLATEWARSGKGPIILEMLTYRY 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ WA+E +LKEI+ VR I+ ++ Sbjct: 250 RGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLIEKGWATEEELKEIDREVRDIVADAA 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FA+ D EPD +ELY+DIL+ Sbjct: 310 DFAEHDPEPDASELYTDILL 329 >gi|298291779|ref|YP_003693718.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Starkeya novella DSM 506] gi|296928290|gb|ADH89099.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Starkeya novella DSM 506] Length = 361 Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust. Identities = 222/320 (69%), Positives = 272/320 (85%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 VSEF+K +EL AYR ML IRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+ +L EGD Sbjct: 41 VSEFSKAEELDAYRKMLEIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQAALKEGD 100 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++IT YR+HGH+LACG+D +MAELTGR+GG SKGKGGSMHMFS + GF+GGHGIVGAQ Sbjct: 101 EVITGYRDHGHMLACGMDPKGVMAELTGRRGGYSKGKGGSMHMFSIEKGFFGGHGIVGAQ 160 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTG+AFAN+YR +D + + FGDGAANQGQVYESFN+A LW L V+++IENN+YAMG Sbjct: 161 VSLGTGLAFANRYRDNDNVSLTYFGDGAANQGQVYESFNMAELWKLPVVFIIENNKYAMG 220 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+V+RASAQT+FSKRG SFNIPG QVDGMD+RAVKA +AV + R+ KGP I+EMLTYR Sbjct: 221 TAVNRASAQTDFSKRGTSFNIPGEQVDGMDVRAVKAAGARAVEFARSGKGPYILEMLTYR 280 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR++EE+ +MR+ HDPIEQVR RLL KWA+E +LK I+ +R +N + Sbjct: 281 YRGHSMSDPAKYRSKEEVQKMRTEHDPIEQVRNRLLEKKWATEEELKAIDAEIRDQMNAA 340 Query: 344 VEFAQSDKEPDPAELYSDIL 363 +FA +D EPD +ELY+D+L Sbjct: 341 ADFASADPEPDVSELYTDVL 360 >gi|325292760|ref|YP_004278624.1| pyruvate dehydrogenase E1 component, subunit alpha [Agrobacterium sp. H13-3] gi|325060613|gb|ADY64304.1| pyruvate dehydrogenase E1 component, alpha subunit [Agrobacterium sp. H13-3] Length = 347 Score = 471 bits (1212), Expect = e-131, Method: Compositional matrix adjust. Identities = 227/319 (71%), Positives = 276/319 (86%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +F+KE+EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+MS EGDQ+ Sbjct: 29 DFSKEEELHAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMSQKEGDQV 88 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+HGH+LA G+ A +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQVS Sbjct: 89 ITAYRDHGHMLALGMSARGVMAELTGRKGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVS 148 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTG+AFANKYR +D + V FGDGAANQGQVYESFN+AALW L +IY++ENN+YAMGTS Sbjct: 149 LGTGLAFANKYRGNDNVSVTYFGDGAANQGQVYESFNMAALWKLPIIYIVENNRYAMGTS 208 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +RA+AQ+N+S RG SF IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EMLTYRYR Sbjct: 209 TARATAQSNYSLRGQSFGIPGIQVDGMDVRAVKAAADQALEHCRSGKGPIILEMLTYRYR 268 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YR+++E+ +MRS HDPIEQV+ RLL WASE +LK I+ +VR I+ +S + Sbjct: 269 GHSMSDPAKYRSKDEVQKMRSEHDPIEQVKARLLEQGWASEDELKAIDKDVRDIVADSAD 328 Query: 346 FAQSDKEPDPAELYSDILI 364 FAQ+D EPD +ELY+DIL+ Sbjct: 329 FAQNDPEPDVSELYTDILL 347 >gi|312114099|ref|YP_004011695.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Rhodomicrobium vannielii ATCC 17100] gi|311219228|gb|ADP70596.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhodomicrobium vannielii ATCC 17100] Length = 335 Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust. Identities = 213/319 (66%), Positives = 267/319 (83%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 E ++++EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M++ EGDQ Sbjct: 16 PELSRDEELHAYREMLLIRRFEEKAGQLYGMGQIGGFCHLYIGQEAVVVGMQMTVREGDQ 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR+HGH+L CG+D +MAELTGR+GG S+GKGGSMHMFS + F+GGHGIVGAQV Sbjct: 76 VITAYRDHGHMLVCGMDPKGVMAELTGRRGGYSRGKGGSMHMFSVEKNFFGGHGIVGAQV 135 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LGTG+AFANKYR + + + +GDGAANQGQVYE+FN+A LW L V+YV+ENN+Y MGT Sbjct: 136 PLGTGLAFANKYRGNGNVSLTYYGDGAANQGQVYEAFNMAELWKLPVVYVVENNKYGMGT 195 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S++RASA TN S+RG SFNIPG QVDGMD+RAVK ++AVA+ RA KGP I+EMLTYRY Sbjct: 196 SINRASALTNLSQRGASFNIPGRQVDGMDVRAVKEAGEEAVAWARAGKGPYILEMLTYRY 255 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR++EE+++MR HDPIE VR+RL+ + A+E DLK I+ +R I+N + Sbjct: 256 RGHSMSDPAKYRSKEEVDKMRHEHDPIEMVRQRLIASDRATEDDLKAIDKEIRAIVNEAA 315 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFAQ+D EPD AELY++++ Sbjct: 316 EFAQTDPEPDVAELYTNVV 334 >gi|115524619|ref|YP_781530.1| pyruvate dehydrogenase (acetyl-transferring) [Rhodopseudomonas palustris BisA53] gi|115518566|gb|ABJ06550.1| Pyruvate dehydrogenase (acetyl-transferring) [Rhodopseudomonas palustris BisA53] Length = 346 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 228/320 (71%), Positives = 278/320 (86%), Gaps = 1/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + EF+KEQ+L A R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEA++VGM+M+L +GD Sbjct: 27 IVEFSKEQDLRALRDMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAIVVGMQMALKQGD 86 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q+IT YR+HGH+LACG+DA +MAELTGR+GG SKGKGGSMHMFS++ FYGGHGIVGAQ Sbjct: 87 QVITGYRDHGHMLACGMDAKGVMAELTGRRGGYSKGKGGSMHMFSSEKHFYGGHGIVGAQ 146 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTG+AFAN+YR +D + + FGDGA+NQGQVYESFN+A LW L VIYVIENN+YAMG Sbjct: 147 VSLGTGLAFANRYRGNDNVSLAYFGDGASNQGQVYESFNMAELWKLPVIYVIENNRYAMG 206 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV R+SAQT+F+KRGVSFNIPG QVDGMD+RAVKA D+AVAYCRA KGP I+EM TYR Sbjct: 207 TSVKRSSAQTDFAKRGVSFNIPGDQVDGMDVRAVKAAGDRAVAYCRAGKGPYILEMQTYR 266 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YRTREE++++R++ DPIEQVR+RLL + SE +LK I+ VR+I+N S Sbjct: 267 YRGHSMSDPAKYRTREEVDKVRNDQDPIEQVRQRLLRMR-VSEQELKAIDAEVREIVNAS 325 Query: 344 VEFAQSDKEPDPAELYSDIL 363 EFAQ+D EP+ +EL++D++ Sbjct: 326 AEFAQNDPEPEASELWTDVV 345 >gi|170747420|ref|YP_001753680.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium radiotolerans JCM 2831] gi|170653942|gb|ACB22997.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium radiotolerans JCM 2831] Length = 361 Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust. Identities = 210/321 (65%), Positives = 264/321 (82%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +F ++++L AY MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV++GM+M+ EGD Sbjct: 37 MPQFTRDEDLHAYHEMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVIGMQMASVEGD 96 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q+IT YR+HGH+LACG+D +MAELTGR+GG S+GKGGSMHMFS + F+GGHGIVGAQ Sbjct: 97 QVITGYRDHGHMLACGMDPKGVMAELTGRRGGYSRGKGGSMHMFSREKQFFGGHGIVGAQ 156 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTG+AFA+ YR + K+ + GDGAANQGQVYESFN+AALW L V+YVIENN+YAMG Sbjct: 157 VSLGTGLAFADHYRENGKVSLTYMGDGAANQGQVYESFNMAALWKLPVVYVIENNRYAMG 216 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV+RASAQT+FSKRG+SF IPG QVDGMD+R V+ +A+ + R +GP I+EM TYR Sbjct: 217 TSVARASAQTDFSKRGLSFGIPGEQVDGMDVRTVREAATRAIEHARTGQGPYILEMQTYR 276 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YRT++E+++MR HDPIE VRKRLL E +LK + VR+++N S Sbjct: 277 YRGHSMSDPAKYRTKDEVSKMRDEHDPIEMVRKRLLELHAVPEAELKATDAKVREVVNAS 336 Query: 344 VEFAQSDKEPDPAELYSDILI 364 EFA +D EPDP+EL++DIL+ Sbjct: 337 AEFATNDPEPDPSELWTDILL 357 >gi|254469209|ref|ZP_05082614.1| pyruvate dehydrogenase E1 component, alpha subunit [Pseudovibrio sp. JE062] gi|211961044|gb|EEA96239.1| pyruvate dehydrogenase E1 component, alpha subunit [Pseudovibrio sp. JE062] Length = 349 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 220/319 (68%), Positives = 272/319 (85%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 EF+KE+EL+AYR ML IRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+M+ +GDQM Sbjct: 31 EFSKEEELNAYREMLFIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMEMAKEKGDQM 90 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YR+H H+LACG+D + +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQV+ Sbjct: 91 ITSYRDHAHMLACGMDPNGVMAELTGRRGGLSKGKGGSMHMFSKEQEFYGGHGIVGAQVA 150 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTG+AFAN+Y+ + K+ + FGDGAANQGQVYESFN+A LWNL VIYVIENN+Y MGTS Sbjct: 151 LGTGLAFANRYKENGKVSMAFFGDGAANQGQVYESFNMAKLWNLPVIYVIENNKYGMGTS 210 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + RAS+ T+ S+RG SF IPG+QVDGMD+RAVKA D A+ +CR GP I+EM+TYRYR Sbjct: 211 IERASSTTDLSQRGASFGIPGVQVDGMDVRAVKAATDYAMEWCREGNGPYILEMITYRYR 270 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YR+++E+ +MRS HDPIEQVR RLL +WASE +LK I+ VR ++ S E Sbjct: 271 GHSMSDPAKYRSKDEVQKMRSEHDPIEQVRARLLEKEWASEDELKAIDKEVRGVVAASAE 330 Query: 346 FAQSDKEPDPAELYSDILI 364 FAQ+D EPDP+ELY+DI++ Sbjct: 331 FAQNDPEPDPSELYTDIVL 349 >gi|304391614|ref|ZP_07373556.1| pyruvate dehydrogenase E1 component, alpha subunit [Ahrensia sp. R2A130] gi|303295843|gb|EFL90201.1| pyruvate dehydrogenase E1 component, alpha subunit [Ahrensia sp. R2A130] Length = 350 Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust. Identities = 211/319 (66%), Positives = 266/319 (83%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +++K+QEL+AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+ GM+ +L EGDQ Sbjct: 25 DYDKQQELNAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVTGMQAALIEGDQA 84 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+HGH+LACG+D IMAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGAQVS Sbjct: 85 ITAYRDHGHMLACGMDPKGIMAELTGREGGYSRGKGGSMHMFSKEKNFYGGHGIVGAQVS 144 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTG+AF NKY + + FGDGA+NQGQVYESFN+A LW+L VIY+IENN+YAMGT+ Sbjct: 145 LGTGLAFNNKYTENGNVSCTYFGDGASNQGQVYESFNMAKLWDLPVIYIIENNRYAMGTA 204 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R+SA T+FSKRG SFNIPG++VDGMD+RAV+A + A +CR+ GPII++M TYRYR Sbjct: 205 VHRSSALTDFSKRGCSFNIPGIEVDGMDVRAVQAAGELAADWCRSGHGPIILDMQTYRYR 264 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YR+++E+ +MR+ +DPIE+V+ R+ KWA E +LK I+ VR I+ + + Sbjct: 265 GHSMSDPAKYRSKDEVQKMRAENDPIERVKARMAEKKWADEDELKAIDKEVRAIVAEAAD 324 Query: 346 FAQSDKEPDPAELYSDILI 364 FAQ++ EPDP+EL++DILI Sbjct: 325 FAQTNPEPDPSELWTDILI 343 >gi|222148556|ref|YP_002549513.1| pyruvate dehydrogenase alpha subunit [Agrobacterium vitis S4] gi|221735542|gb|ACM36505.1| pyruvate dehydrogenase alpha subunit [Agrobacterium vitis S4] Length = 348 Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust. Identities = 233/321 (72%), Positives = 278/321 (86%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + EF++E+EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+L GD Sbjct: 28 IEEFDREKELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMALKLGD 87 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q+IT YR+HGH+LACG+ A +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQ Sbjct: 88 QVITGYRDHGHMLACGMSARGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQ 147 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTG+AFANKYR +D + + FGDGAANQGQVYESFN+A LWNL VIYVIENN+YAMG Sbjct: 148 VSLGTGLAFANKYRGNDNVSLAYFGDGAANQGQVYESFNMARLWNLPVIYVIENNRYAMG 207 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV+RASAQT+FS+RGVSFNIPG +VDGMD+RAVKA +AV +CRA KGP+I+EM TYR Sbjct: 208 TSVARASAQTDFSQRGVSFNIPGFKVDGMDVRAVKAAAVQAVEHCRAGKGPVILEMETYR 267 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR+++E+ +MRS HDPIEQVR RLL WASE DLK I+ +VR I+ +S Sbjct: 268 YRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVRLRLLEKGWASEDDLKLIDKDVRDIVADS 327 Query: 344 VEFAQSDKEPDPAELYSDILI 364 +FAQ+D EPD +ELY+DIL+ Sbjct: 328 ADFAQADPEPDASELYTDILL 348 >gi|27379894|ref|NP_771423.1| pyruvate dehydrogenase subunit alpha [Bradyrhizobium japonicum USDA 110] gi|27353047|dbj|BAC50048.1| pyruvate dehydrogenase alpha subunit [Bradyrhizobium japonicum USDA 110] Length = 340 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 231/317 (72%), Positives = 267/317 (84%), Gaps = 1/317 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 EF +EQEL A R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+L EGDQ+ Sbjct: 23 EFTREQELKALRDMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAVVVGMQMALKEGDQV 82 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT YR+HGH+LA G+DA+ +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQVS Sbjct: 83 ITGYRDHGHMLATGMDANGVMAELTGRRGGYSKGKGGSMHMFSKEKHFYGGHGIVGAQVS 142 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTG+AFAN YR + + V FGDGAANQGQVYESFN+A LW L VIYVIENN+YAMGT+ Sbjct: 143 LGTGLAFANNYRGNGNVSVTYFGDGAANQGQVYESFNMAELWKLPVIYVIENNRYAMGTA 202 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 VSRASAQ +FSKRG SFNIPG+QVDGMD+RAVKA D+A A+CRA KGP+I+EM TYRYR Sbjct: 203 VSRASAQQDFSKRGASFNIPGLQVDGMDVRAVKAAGDEAAAWCRAGKGPMILEMQTYRYR 262 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YRTREE+ ++R + DPIEQVR RLL K SE DLK I+ VR I+N S + Sbjct: 263 GHSMSDPAKYRTREEVEKVRHDQDPIEQVRNRLLTAK-VSEADLKAIDAEVRDIVNASAD 321 Query: 346 FAQSDKEPDPAELYSDI 362 FAQ D EPD AEL++D+ Sbjct: 322 FAQHDPEPDAAELWTDV 338 >gi|254502505|ref|ZP_05114656.1| pyruvate dehydrogenase E1 component, alpha subunit [Labrenzia alexandrii DFL-11] gi|222438576|gb|EEE45255.1| pyruvate dehydrogenase E1 component, alpha subunit [Labrenzia alexandrii DFL-11] Length = 345 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 219/321 (68%), Positives = 269/321 (83%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++EF KE+E AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+M+ +GD Sbjct: 25 IAEFTKEEEFHAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQMAKIDGD 84 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 QMITAYR+HGH+LA +D +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQ Sbjct: 85 QMITAYRDHGHMLAMDLDPKGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQ 144 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTG+ FANKYR + +C+ FGDGA+NQGQVYESFN+A LW L VIYVIENN+Y MG Sbjct: 145 VSLGTGLGFANKYRENGNVCMTFFGDGASNQGQVYESFNMAELWKLPVIYVIENNKYGMG 204 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV R+S+ T+ S+RG SFNIPG +VDGMD+RAV A KA+ +CR KGP I+EM+TYR Sbjct: 205 TSVERSSSMTDLSQRGASFNIPGEKVDGMDVRAVMAASKKALEWCRDGKGPYILEMVTYR 264 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR+++E+ +MR+ HDPIEQVRKRLL NKWA+E DLK ++ ++R + + Sbjct: 265 YRGHSMSDPAKYRSKDEVQKMRTEHDPIEQVRKRLLDNKWATEDDLKGLDKDIRARVAEA 324 Query: 344 VEFAQSDKEPDPAELYSDILI 364 EFAQ+D EPD +ELY+DIL+ Sbjct: 325 AEFAQTDPEPDASELYTDILL 345 >gi|188582154|ref|YP_001925599.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium populi BJ001] gi|179345652|gb|ACB81064.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium populi BJ001] Length = 349 Score = 464 bits (1195), Expect = e-129, Method: Compositional matrix adjust. Identities = 209/321 (65%), Positives = 264/321 (82%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +F K+++L AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+M+ +GD Sbjct: 25 IPQFTKDEDLHAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQMAGEDGD 84 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q IT YR+HGH+LACG+D +MAELTGR+GG S+GKGGSMHMFS + F+GGHGIVGAQ Sbjct: 85 QNITGYRDHGHMLACGMDPKGVMAELTGRRGGYSRGKGGSMHMFSREKQFFGGHGIVGAQ 144 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V+LGTG+AFA+ Y ++ K+ GDGAANQGQVYESFN+AALW L V+YVIENN+YAMG Sbjct: 145 VALGTGLAFADAYLKNGKVSFTYMGDGAANQGQVYESFNMAALWKLPVVYVIENNRYAMG 204 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV+RASAQT+FSKRG+SF IPG QVDGMD+R V+ +A+ + R+ +GP I+EM TYR Sbjct: 205 TSVARASAQTDFSKRGLSFGIPGEQVDGMDVRTVRVAAARAINHARSGEGPYILEMQTYR 264 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR+++E+++MR HDPIE VRKRLL E +LK ++ VR+I+N S Sbjct: 265 YRGHSMSDPAKYRSKDEVSKMRDEHDPIEMVRKRLLEAHGVPEAELKSVDAKVREIVNES 324 Query: 344 VEFAQSDKEPDPAELYSDILI 364 +FA D EPDP+EL++DIL+ Sbjct: 325 ADFATHDPEPDPSELWTDILL 345 >gi|182678481|ref|YP_001832627.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Beijerinckia indica subsp. indica ATCC 9039] gi|182634364|gb|ACB95138.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 345 Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust. Identities = 218/349 (62%), Positives = 266/349 (76%), Gaps = 8/349 (2%) Query: 16 ALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGM 75 A P+ AK A + P EF E+E AYR MLL+RRFEEKAGQ+YGM Sbjct: 3 AAPPTSRAKPTAGKPRSASNTP--------EFTPEEERYAYRSMLLMRRFEEKAGQMYGM 54 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 G++GGFCHL IGQEAV+ G+ M+ EGDQ IT+YR+H H+LACG+D ++AELTGR+ G Sbjct: 55 GLIGGFCHLYIGQEAVVTGIMMAAKEGDQTITSYRDHAHMLACGLDPKGVLAELTGRRHG 114 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG 195 +SKGKGGSMHMFS + FYGGHGIVGAQV LGTG+AFAN YR +D + V FGDGAANQG Sbjct: 115 LSKGKGGSMHMFSREKHFYGGHGIVGAQVPLGTGLAFANWYRGNDNVSFVYFGDGAANQG 174 Query: 196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIR 255 QVYESFN+A LW L V+YVIENN+YAMGTSV+R+SA T+FSKRG SFNIPG QVDGMD+R Sbjct: 175 QVYESFNMAELWKLPVVYVIENNRYAMGTSVTRSSALTDFSKRGQSFNIPGEQVDGMDVR 234 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVR 315 AV+A + AV +CR GPII+EM TYRYRGHSMSDPA YR++EE+ +MR HDPIEQV+ Sbjct: 235 AVRAATEHAVEWCRGGNGPIILEMQTYRYRGHSMSDPAKYRSKEEVQKMREEHDPIEQVK 294 Query: 316 KRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 RLL A+E +LK I+ VR I+ + +FA D EPD +EL++DIL+ Sbjct: 295 ARLLGGNLATEDELKAIDAEVRAIVAEAADFATQDPEPDVSELWTDILV 343 >gi|163852205|ref|YP_001640248.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium extorquens PA1] gi|218530964|ref|YP_002421780.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Methylobacterium chloromethanicum CM4] gi|240139535|ref|YP_002964011.1| pyruvate dehydrogenase E1 alpha subunit [Methylobacterium extorquens AM1] gi|254561951|ref|YP_003069046.1| pyruvate dehydrogenase E1 subunit alpha [Methylobacterium extorquens DM4] gi|22652783|gb|AAN03811.1|AF497851_1 pyruvate dehydrogenase E1 component alpha subunit [Methylobacterium extorquens AM1] gi|163663810|gb|ABY31177.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium extorquens PA1] gi|218523267|gb|ACK83852.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium chloromethanicum CM4] gi|240009508|gb|ACS40734.1| pyruvate dehydrogenase E1 alpha subunit [Methylobacterium extorquens AM1] gi|254269229|emb|CAX25195.1| pyruvate dehydrogenase E1 alpha subunit [Methylobacterium extorquens DM4] Length = 349 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 210/321 (65%), Positives = 263/321 (81%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +F K+++L AYR ML IRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+M+ +GD Sbjct: 25 IPQFTKDEDLHAYREMLSIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQMAGEDGD 84 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q IT YR+HGH+LACG+D +MAELTGR+GG S+GKGGSMHMFS + F+GGHGIVGAQ Sbjct: 85 QNITGYRDHGHMLACGMDPKGVMAELTGRRGGYSRGKGGSMHMFSREKQFFGGHGIVGAQ 144 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V+LGTG+AFA+ Y ++ K+ GDGAANQGQVYESFN+AALW L V+YVIENN+YAMG Sbjct: 145 VALGTGLAFADAYLKNGKVSFTYMGDGAANQGQVYESFNMAALWKLPVVYVIENNRYAMG 204 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV+RASAQT+FSKRG+SF IPG QVDGMD+R V+ +A+ + R+ +GP I+EM TYR Sbjct: 205 TSVARASAQTDFSKRGLSFGIPGEQVDGMDVRTVREAAARAINHARSGEGPYILEMQTYR 264 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YRT++E+++MR HDPIE VRKRLL E +LK I+ VR+I+N S Sbjct: 265 YRGHSMSDPAKYRTKDEVSKMRDEHDPIEMVRKRLLEAHGVPEAELKSIDAKVREIVNES 324 Query: 344 VEFAQSDKEPDPAELYSDILI 364 +FA D EPDP+EL++DIL+ Sbjct: 325 ADFATHDPEPDPSELWTDILL 345 >gi|328543939|ref|YP_004304048.1| Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [polymorphum gilvum SL003B-26A1] gi|326413683|gb|ADZ70746.1| Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit [Polymorphum gilvum SL003B-26A1] Length = 350 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 220/319 (68%), Positives = 268/319 (84%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 EF++++EL AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+M+ T+GDQM Sbjct: 32 EFSRDEELHAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQMAKTDGDQM 91 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT YR+HGH+LA +D +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQVS Sbjct: 92 ITGYRDHGHMLAMDLDPKGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVS 151 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTGIAFAN+Y + + + FGDGA+NQGQVYESFN+A LW L VIYVIENN+Y MGTS Sbjct: 152 LGTGIAFANQYTGNGNVAMTFFGDGASNQGQVYESFNMAQLWKLPVIYVIENNKYGMGTS 211 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V RAS+ T+ S+RG SF IPG QVDGMD+RAVKA DKA+A+CR GP I+EM+TYRYR Sbjct: 212 VERASSTTDLSQRGASFGIPGEQVDGMDVRAVKAASDKALAWCREGNGPYILEMVTYRYR 271 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YR+++E+ +MR+ DPIEQVR RL+ N WASE DLK I+ +VR ++ + E Sbjct: 272 GHSMSDPAKYRSKDEVQKMRTERDPIEQVRARLIENDWASEDDLKAIDKDVRALVAEAAE 331 Query: 346 FAQSDKEPDPAELYSDILI 364 FAQ+D EPDP+ELY+DIL+ Sbjct: 332 FAQTDPEPDPSELYTDILL 350 >gi|299134958|ref|ZP_07028149.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Afipia sp. 1NLS2] gi|298589935|gb|EFI50139.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Afipia sp. 1NLS2] Length = 339 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 226/345 (65%), Positives = 273/345 (79%), Gaps = 12/345 (3%) Query: 18 NPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 PS +A + ++S + EF KEQEL+A R MLLIRRFEEKAGQLYGMG Sbjct: 5 KPSAAATKGTSASAAKL-----------EFTKEQELTALRDMLLIRRFEEKAGQLYGMGA 53 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 +GGFCHL IGQEAV+ G++M L +GDQ+IT YR+HGH+LA G+D +MAELTGR+ G S Sbjct: 54 IGGFCHLYIGQEAVVTGIQMVLKQGDQIITGYRDHGHMLATGMDPKGVMAELTGRRHGYS 113 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHMFS + FYGGHGIVGAQV LGTG+AFAN+YR + I V FGDGAANQGQV Sbjct: 114 KGKGGSMHMFSKEKHFYGGHGIVGAQVPLGTGLAFANRYRNNGNISVAYFGDGAANQGQV 173 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 YESFN+A LW L +IYVIENN+YAMGTSV+R+SAQT+FSKRG++FNIPG QVDGMD+RAV Sbjct: 174 YESFNMAELWKLPIIYVIENNRYAMGTSVTRSSAQTDFSKRGIAFNIPGEQVDGMDVRAV 233 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 KA ++A A+CR KGP I+EM TYRYRGHSMSDPA YRTREE+ ++R + DPIEQVRKR Sbjct: 234 KAAAERAAAWCREGKGPYILEMQTYRYRGHSMSDPAKYRTREEVEKVRHDQDPIEQVRKR 293 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 LL K E +LK+I+ VR+I+N + +FAQ D EPD +ELY+DI Sbjct: 294 LLDAK-VDEAELKKIDAEVREIVNEAADFAQHDPEPDVSELYTDI 337 >gi|92117295|ref|YP_577024.1| pyruvate dehydrogenase (lipoamide) [Nitrobacter hamburgensis X14] gi|91800189|gb|ABE62564.1| Pyruvate dehydrogenase (lipoamide) [Nitrobacter hamburgensis X14] Length = 340 Score = 461 bits (1187), Expect = e-128, Method: Compositional matrix adjust. Identities = 222/316 (70%), Positives = 269/316 (85%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F +EQ+L A R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEA++VGM+M++ EGDQ+I Sbjct: 24 FTREQDLHALRDMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAIVVGMQMAIGEGDQVI 83 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HGH+LACG+DA +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQVSL Sbjct: 84 TGYRDHGHMLACGMDARGVMAELTGRRGGYSKGKGGSMHMFSKEKNFYGGHGIVGAQVSL 143 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTG+AFAN+YR +D++ + FGDGAANQGQVYESFN+A LW L V+Y+IENN+YAMGTSV Sbjct: 144 GTGLAFANRYRGNDRVSLAYFGDGAANQGQVYESFNMAELWKLPVVYIIENNRYAMGTSV 203 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +R+SAQT+FS+RG SFNIPG Q+DGMD+RAVKA DKAV +CR GP I+EM TYRYRG Sbjct: 204 TRSSAQTDFSRRGASFNIPGEQIDGMDVRAVKAAGDKAVKWCRDGNGPYILEMQTYRYRG 263 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTREE++ +R + DPIEQVR RLL K SE DLK+I+ VR+I+N + +F Sbjct: 264 HSMSDPAKYRTREEVDRVRHDQDPIEQVRNRLLAAK-VSEDDLKKIDAEVREIVNAAADF 322 Query: 347 AQSDKEPDPAELYSDI 362 AQ+D EPD +ELY+D+ Sbjct: 323 AQNDPEPDVSELYTDV 338 >gi|118589907|ref|ZP_01547311.1| pyruvate dehydrogenase alpha2 subunit protein [Stappia aggregata IAM 12614] gi|118437404|gb|EAV44041.1| pyruvate dehydrogenase alpha2 subunit protein [Stappia aggregata IAM 12614] Length = 349 Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust. Identities = 217/321 (67%), Positives = 268/321 (83%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++EF+K++EL AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+M+ +GD Sbjct: 29 IAEFDKDEELHAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQMAKKDGD 88 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 QMIT YR+HGH+LA +D +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQ Sbjct: 89 QMITGYRDHGHMLAMDLDPKGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQ 148 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTG+ FANKYR + + + FGDGA+NQGQVYESFN+A LW L V+YV+ENN+Y MG Sbjct: 149 VSLGTGLGFANKYRENGNVAMAFFGDGASNQGQVYESFNMAELWKLPVVYVVENNKYGMG 208 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV+RASA T+ S+RG SFNIPG QVDGMD+RAVKA ++A+ +CR KGP I+EM+TYR Sbjct: 209 TSVARASATTDLSQRGASFNIPGKQVDGMDVRAVKAASEEALEWCREGKGPFILEMITYR 268 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR+++E+ +MR+ HDPIEQVR RL+ WASE DLK I+ VR + + Sbjct: 269 YRGHSMSDPAKYRSKDEVQKMRTEHDPIEQVRARLMDKGWASEDDLKAIDKEVRARVAEA 328 Query: 344 VEFAQSDKEPDPAELYSDILI 364 EFAQ+D EPD +ELY+DIL+ Sbjct: 329 AEFAQTDPEPDASELYTDILL 349 >gi|307942230|ref|ZP_07657581.1| pyruvate dehydrogenase E1 component, alpha subunit [Roseibium sp. TrichSKD4] gi|307774516|gb|EFO33726.1| pyruvate dehydrogenase E1 component, alpha subunit [Roseibium sp. TrichSKD4] Length = 348 Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust. Identities = 218/319 (68%), Positives = 267/319 (83%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 EF+K+QEL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ +GDQM Sbjct: 30 EFDKDQELHAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAKVDGDQM 89 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT YR+HGH+LA +D +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQVS Sbjct: 90 ITGYRDHGHMLAMDLDPKGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVS 149 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTG+ FANKYR + +C+ FGDGA+NQGQVYESFN+A LW L V+YVIENN+Y MGTS Sbjct: 150 LGTGLGFANKYRENGNVCMAFFGDGASNQGQVYESFNMAELWKLPVVYVIENNKYGMGTS 209 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R+SA T+ S+RG SF IPG QVDGMD+RAV A +KA+ +CR+ KGP I+EM+TYRYR Sbjct: 210 VERSSATTDLSQRGASFGIPGEQVDGMDVRAVMAASEKALEWCRSGKGPYILEMITYRYR 269 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YR+++E+ +MR+ HDPIEQV+ R+L NKWA+E +LK I+ +VR I + E Sbjct: 270 GHSMSDPAKYRSKDEVQKMRNEHDPIEQVKARILENKWATEDELKAIDKDVRAICAEAAE 329 Query: 346 FAQSDKEPDPAELYSDILI 364 FAQ+D EPD +ELY+DIL+ Sbjct: 330 FAQNDPEPDVSELYTDILL 348 >gi|240850261|ref|YP_002971654.1| pyruvate dehydrogenase subunit alpha [Bartonella grahamii as4aup] gi|240267384|gb|ACS50972.1| pyruvate dehydrogenase subunit alpha [Bartonella grahamii as4aup] Length = 346 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 210/321 (65%), Positives = 270/321 (84%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +++F KE+E+ AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV++G + EGD Sbjct: 26 IADFTKEEEIDAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVIGTLKAAKEGD 85 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q+IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGGSMHMFS + FYGGHGIVGAQ Sbjct: 86 QVITSYRDHGHMLAVGMSPRGVMAELTGRQGGFSKGKGGSMHMFSKEKNFYGGHGIVGAQ 145 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V +G+G+AF+N+Y D + +V FGDGAANQGQVYESFN+A+LW L V+Y+IENNQYAMG Sbjct: 146 VPIGSGLAFSNRYLGKDNVTLVYFGDGAANQGQVYESFNMASLWKLPVVYIIENNQYAMG 205 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSVSRASA+T+FS+RG+SF IPG+ VDGMD+R+VK D+A+++ R+ KGPII++M TYR Sbjct: 206 TSVSRASAETDFSRRGLSFEIPGIVVDGMDVRSVKGAADEAISWARSGKGPIILDMQTYR 265 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR++EE+ +++ HDPI+QV+ R+L WA+E DLK IE VR I+ ++ Sbjct: 266 YRGHSMSDPAKYRSKEEVQKIKEEHDPIDQVKSRILKKNWANEDDLKSIEKEVRAIVADA 325 Query: 344 VEFAQSDKEPDPAELYSDILI 364 +FAQSD+EPD +ELY+DIL+ Sbjct: 326 ADFAQSDQEPDASELYTDILV 346 >gi|163868058|ref|YP_001609262.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella tribocorum CIP 105476] gi|161017709|emb|CAK01267.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella tribocorum CIP 105476] Length = 346 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 211/321 (65%), Positives = 268/321 (83%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ F KE+E+ AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV++G + EGD Sbjct: 26 IAVFTKEEEIDAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVIGTLKATKEGD 85 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q+IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGGSMHMFS + FYGGHGIVGAQ Sbjct: 86 QVITSYRDHGHMLAVGMSPRGVMAELTGRQGGFSKGKGGSMHMFSKEKNFYGGHGIVGAQ 145 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V +G+G+AF+N+Y D + +V FGDGAANQGQVYESFN+A+LW L V+Y+IENNQYAMG Sbjct: 146 VPIGSGLAFSNQYLGKDNVTLVYFGDGAANQGQVYESFNMASLWKLPVVYIIENNQYAMG 205 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSVSRASA+T+FS+RG+SF IPG+ VDGMD+R+VK D+A+++ R+ KGPII++M TYR Sbjct: 206 TSVSRASAETDFSRRGLSFEIPGIVVDGMDVRSVKGAADEAISWARSGKGPIILDMQTYR 265 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR++EE+ +++ HDPI+QVR R+L WASE D K IE VR I+ ++ Sbjct: 266 YRGHSMSDPAKYRSKEEVQKIKEEHDPIDQVRSRILKQNWASEDDFKSIEKEVRAIVADA 325 Query: 344 VEFAQSDKEPDPAELYSDILI 364 +FAQSD+EPD +ELY+DIL+ Sbjct: 326 ADFAQSDQEPDASELYTDILV 346 >gi|90419623|ref|ZP_01227533.1| pyruvate dehydrogenase, alpha subunit [Aurantimonas manganoxydans SI85-9A1] gi|90336560|gb|EAS50301.1| pyruvate dehydrogenase, alpha subunit [Aurantimonas manganoxydans SI85-9A1] Length = 314 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 204/304 (67%), Positives = 261/304 (85%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M++ EGD+++T YR+HGH+LA Sbjct: 1 MLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAMKEGDEVVTGYRDHGHMLAT 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G++A +MAELTGR+ G SKGKGGSMHMFS + F+GGHGIVGAQV +GTG+AF+N+Y+ Sbjct: 61 GMEARGVMAELTGRRSGYSKGKGGSMHMFSKEKKFFGGHGIVGAQVPIGTGLAFSNRYKG 120 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 +D I + FGDGAANQGQVYESFN+A+LW L V+YVIENN+YAMGTSV+RASA+TNF+ R Sbjct: 121 NDSISITYFGDGAANQGQVYESFNMASLWKLPVVYVIENNRYAMGTSVNRASAETNFAHR 180 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 G+SF IPG+QVDGMD+RAVKA D A +CR+ +GPII+EM+TYRYRGHSMSDPA YR+R Sbjct: 181 GLSFKIPGIQVDGMDVRAVKAAGDLAAEHCRSGEGPIILEMMTYRYRGHSMSDPAKYRSR 240 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +E+ +MRS DPIEQV++RL+ + SE D+K+I+ VR+I+ +S +FAQ+D EPD +EL Sbjct: 241 DEVQKMRSESDPIEQVKRRLMEEQGMSEDDVKDIDKKVREIVADSADFAQNDPEPDVSEL 300 Query: 359 YSDI 362 ++DI Sbjct: 301 WTDI 304 >gi|319404087|emb|CBI77675.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella rochalimae ATCC BAA-1498] Length = 346 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 217/342 (63%), Positives = 276/342 (80%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 AK+++ S+V + +++ F KE+E+ AYR MLLIRRFEEKAGQLYGMG++GGFC Sbjct: 5 AKKSSMSTVYAGSSDTTKTAQIANFTKEEEIDAYREMLLIRRFEEKAGQLYGMGLIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAVI G + GDQ+IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGG Sbjct: 65 HLYIGQEAVITGTLKATKAGDQIITSYRDHGHMLAAGMSPRGVMAELTGRQGGFSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQV +G+G+AF+N+Y D + +V FGDGAANQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVPIGSGLAFSNQYLGKDNVTLVYFGDGAANQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +AALW L VIY+IENNQYAMGTSVSRASA+T+FS+RG+SF+IPG+ VDGMD+RAVK D Sbjct: 185 MAALWKLPVIYIIENNQYAMGTSVSRASAETDFSRRGLSFDIPGIAVDGMDVRAVKKAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 +A+ + R+ KGPII++M TYRYRGHSMSDPA YR++EE+ +++S HDPI QV+ RL+ Sbjct: 245 EAIVWARSGKGPIILDMQTYRYRGHSMSDPAKYRSKEEVEKIKSEHDPINQVKNRLIKQG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WASE DLK I+ VR I+ ++ +FAQ+D EPD +ELY+DIL+ Sbjct: 305 WASEDDLKFIDKEVRAIVADAADFAQNDLEPDSSELYTDILV 346 >gi|158423365|ref|YP_001524657.1| pyruvate dehydrogenase alpha subunit [Azorhizobium caulinodans ORS 571] gi|158330254|dbj|BAF87739.1| pyruvate dehydrogenase alpha subunit [Azorhizobium caulinodans ORS 571] Length = 337 Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust. Identities = 217/320 (67%), Positives = 268/320 (83%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V F KEQEL AYR MLLIRRFEEKAGQ+YGMG++GGFCHL IGQEAV+VGM+M++ +GD Sbjct: 17 VPTFTKEQELLAYREMLLIRRFEEKAGQMYGMGLIGGFCHLYIGQEAVVVGMQMAMKQGD 76 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q+IT YR+HGH+LA G+++ +MAELTGR+GG SKGKGGSMHMFS + F+GGHGIVGAQ Sbjct: 77 QVITGYRDHGHMLATGMESRGVMAELTGRKGGYSKGKGGSMHMFSIEKQFFGGHGIVGAQ 136 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTG+ FAN YR + + V FGDGAANQGQVYESFN+A LW L V+YVIENN+YAMG Sbjct: 137 VSLGTGLGFANHYRENGSVSVTYFGDGAANQGQVYESFNMAELWKLPVVYVIENNKYAMG 196 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+VSRASAQT+FSKRG SFNIPG QVDGMD+RAVKA ++A+ + R+ KGP I+EM TYR Sbjct: 197 TAVSRASAQTDFSKRGQSFNIPGEQVDGMDVRAVKAAGERALEFARSGKGPYILEMQTYR 256 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR++EE+ +MR+ HDPIEQVR RLL +E +LK+++ +R I+N++ Sbjct: 257 YRGHSMSDPAKYRSKEEVQKMRTEHDPIEQVRNRLLEAGLVTEDELKKVDAEIRDIVNDA 316 Query: 344 VEFAQSDKEPDPAELYSDIL 363 +FA D EPDP+ELY+DI+ Sbjct: 317 ADFATHDPEPDPSELYTDIV 336 >gi|220926285|ref|YP_002501587.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Methylobacterium nodulans ORS 2060] gi|219950892|gb|ACL61284.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium nodulans ORS 2060] Length = 346 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 211/319 (66%), Positives = 261/319 (81%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +F ++++L AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV++G++M+ +GDQ+ Sbjct: 23 QFTRDEDLHAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVIGVQMASKDGDQV 82 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT YR+HGH+LACG+D +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGAQVS Sbjct: 83 ITGYRDHGHMLACGMDPKGVMAELTGRRGGYSRGKGGSMHMFSREKNFYGGHGIVGAQVS 142 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTGI FANKYR + + GDGAANQGQVYESFN+A LW L V+YVIENN+YAMGTS Sbjct: 143 LGTGIGFANKYRGDGAVSLTYMGDGAANQGQVYESFNMAQLWKLPVVYVIENNRYAMGTS 202 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V+RASAQT+FSKRGVSF IPG QVDGMD+RAV+ +A+ + R+ +GP I+EM TYRYR Sbjct: 203 VTRASAQTDFSKRGVSFGIPGEQVDGMDVRAVRQAAARAIEHARSGEGPYILEMQTYRYR 262 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YRT++E+ MR DPIEQVRKRLL + +K I+ VR+I+N + E Sbjct: 263 GHSMSDPAKYRTKDEVARMREESDPIEQVRKRLLGPHKTPDDQIKAIDAKVREIVNQAAE 322 Query: 346 FAQSDKEPDPAELYSDILI 364 FA +D EPDPAEL++D+L+ Sbjct: 323 FATNDPEPDPAELWTDVLL 341 >gi|319898763|ref|YP_004158856.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella clarridgeiae 73] gi|319402727|emb|CBI76274.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella clarridgeiae 73] Length = 346 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 217/345 (62%), Positives = 274/345 (79%), Gaps = 3/345 (0%) Query: 23 AKRAATSSVDCVDIPF---LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 A RA +SV V + +++ F KE+E+ AYR MLLIRRFEEKAGQLYGMG++G Sbjct: 2 AGRAKKNSVSIVHAALSDTTKTAQIANFTKEEEIDAYREMLLIRRFEEKAGQLYGMGLIG 61 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL IGQEAVI G + GDQ+IT+YR+HGH+LA G+ +MAELTGRQGG SKG Sbjct: 62 GFCHLYIGQEAVITGTLKATKAGDQIITSYRDHGHMLAAGMSPRGVMAELTGRQGGFSKG 121 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMFS + FYGGHGIVGAQV +G+G+AF+N+Y + + +V FGDGAANQGQVYE Sbjct: 122 KGGSMHMFSKEKNFYGGHGIVGAQVPIGSGLAFSNQYLGKNNVTLVYFGDGAANQGQVYE 181 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 SFN+A+LW L VIY+IENNQYAMGTSVSRASA+T+FS+RG+SF IPG+ VDGMD+RAVK Sbjct: 182 SFNMASLWKLPVIYIIENNQYAMGTSVSRASAETDFSRRGLSFEIPGIAVDGMDVRAVKG 241 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 D+A+ + R+ KGPII++M TYRYRGHSMSDPA YR++EE+ +++S HDPI QV+ RL+ Sbjct: 242 AADEAIVWARSGKGPIILDMQTYRYRGHSMSDPAKYRSKEEVEKIKSEHDPINQVKNRLI 301 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WASE DLK I+ VR I+ ++ +FAQ+D EPD +ELY+DIL+ Sbjct: 302 KRDWASEDDLKSIDKEVRAIVADAADFAQNDPEPDSSELYTDILV 346 >gi|319407099|emb|CBI80736.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella sp. 1-1C] Length = 346 Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust. Identities = 214/342 (62%), Positives = 276/342 (80%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 AK+++ S++ + +++ F KE+E+ AYR MLLIRRFEEKAGQLYGMG++GGFC Sbjct: 5 AKKSSMSTMYAGSPDTTKTAQIANFTKEEEIDAYREMLLIRRFEEKAGQLYGMGLIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAVI G + GDQ+IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGG Sbjct: 65 HLYIGQEAVITGTLKATKVGDQIITSYRDHGHMLAAGMSPRGVMAELTGRQGGFSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQV +G+G+AF+N+Y D + +V FGDGAANQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVPIGSGLAFSNQYLGKDNVTLVYFGDGAANQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +AALW L V+Y+IENNQYAMGTSVSRASA+TNFS+RG+SF+IPG+ VDGMD+RAVK D Sbjct: 185 MAALWKLPVVYIIENNQYAMGTSVSRASAETNFSRRGLSFDIPGIAVDGMDVRAVKKAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 +A+ + R+ KGP+I++M TYRYRGHSMSDPA YR++EE+ +++S HDPI QV+ RL+ Sbjct: 245 EAIVWARSGKGPMILDMQTYRYRGHSMSDPAKYRSKEEVEKVKSEHDPISQVKSRLIKQG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WASE DLK I+ VR I+ ++ +FAQ+D EPD +ELY+DI++ Sbjct: 305 WASEDDLKFIDNEVRAIVADAADFAQNDLEPDSSELYTDIIV 346 >gi|154247811|ref|YP_001418769.1| pyruvate dehydrogenase (acetyl-transferring) [Xanthobacter autotrophicus Py2] gi|154161896|gb|ABS69112.1| Pyruvate dehydrogenase (acetyl-transferring) [Xanthobacter autotrophicus Py2] Length = 335 Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust. Identities = 215/319 (67%), Positives = 267/319 (83%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + F K+Q+L AYR MLLIRRFEEKAGQ+YGMG++GGFCHL IGQEAV+VGM+M++ GDQ Sbjct: 16 APFTKDQDLLAYREMLLIRRFEEKAGQMYGMGLIGGFCHLYIGQEAVVVGMQMAMKPGDQ 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT YR+HGH+L+ G+ A +MAELTGR+GG+SKGKGGSMHMFS + F+GGHGIVGAQV Sbjct: 76 VITGYRDHGHMLSTGMAARGVMAELTGRRGGLSKGKGGSMHMFSIEKQFFGGHGIVGAQV 135 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 SLGTG+AFA++YR + + V FGDGAANQGQVYESFN+A LW L V+YVIENN+YAMGT Sbjct: 136 SLGTGLAFADRYRNNGAVSVTYFGDGAANQGQVYESFNMAELWKLPVVYVIENNKYAMGT 195 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SVSRASAQ +FSKRG SFNIPG QVDGMD++AVKA ++A+A+ R GP I+EM TYRY Sbjct: 196 SVSRASAQQDFSKRGTSFNIPGEQVDGMDVQAVKAAGERALAFAREGNGPYILEMQTYRY 255 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR++EE+ +MR+ HDPIEQVR RLL A+E +LK+ + VR+I+N + Sbjct: 256 RGHSMSDPAKYRSKEEVQKMRTEHDPIEQVRNRLLETHGATEDELKKFDAEVREIVNEAT 315 Query: 345 EFAQSDKEPDPAELYSDIL 363 +FA +D EPD +ELY+DIL Sbjct: 316 DFATNDPEPDASELYTDIL 334 >gi|159184757|ref|NP_354435.2| pyruvate dehydrogenase alpha subunit [Agrobacterium tumefaciens str. C58] gi|159140045|gb|AAK87220.2| pyruvate dehydrogenase alpha subunit [Agrobacterium tumefaciens str. C58] Length = 306 Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust. Identities = 218/306 (71%), Positives = 266/306 (86%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+MS EGDQ+ITAYR+HGH+LA Sbjct: 1 MLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMSQKEGDQVITAYRDHGHMLAL 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ A +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR Sbjct: 61 GMSARGVMAELTGRKGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRG 120 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 +D + V FGDGAANQGQVYESFN+AALW L +IY++ENN+YAMGTS +RA+AQ+N+S R Sbjct: 121 NDNVSVTYFGDGAANQGQVYESFNMAALWKLPIIYIVENNRYAMGTSTARATAQSNYSLR 180 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 G SF IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EMLTYRYRGHSMSDPA YR++ Sbjct: 181 GQSFGIPGVQVDGMDVRAVKAAADQALEHCRSGKGPIILEMLTYRYRGHSMSDPAKYRSK 240 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +E+ +MRS HDPIEQV+ RLL + WASE +LK I+ +VR I+ +S +FAQ+D EPD +EL Sbjct: 241 DEVQKMRSEHDPIEQVKARLLDHGWASEDELKAIDKDVRDIVADSADFAQNDPEPDVSEL 300 Query: 359 YSDILI 364 Y+DIL+ Sbjct: 301 YTDILL 306 >gi|49475368|ref|YP_033409.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella henselae str. Houston-1] gi|20465205|gb|AAL74287.1| pyruvate dehydrogenase E1 component alpha subunit [Bartonella henselae str. Houston-1] gi|49238174|emb|CAF27383.1| Pyruvate dehydrogenase E1 component, alpha subunit [Bartonella henselae str. Houston-1] Length = 346 Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust. Identities = 210/322 (65%), Positives = 269/322 (83%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 +++ F KE+E+ AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV++G + EG Sbjct: 25 KIANFTKEEEIDAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVIGTLKAAKEG 84 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 DQ+IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGGSMHMFS + FYGGHGIVGA Sbjct: 85 DQVITSYRDHGHMLAVGMSPRGVMAELTGRQGGFSKGKGGSMHMFSKEKNFYGGHGIVGA 144 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV +G+G+AF+N+Y D + +V FGDGAANQGQVYESFN+A+LW L V+Y+IENNQYAM Sbjct: 145 QVPIGSGLAFSNQYLGKDNVTLVYFGDGAANQGQVYESFNMASLWKLPVVYIIENNQYAM 204 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV+RASA+T+FS+RG+SF IPG+ VDGMD+RAVK D+A+ + R+ KGPII++M TY Sbjct: 205 GTSVARASAETDFSRRGLSFEIPGIVVDGMDVRAVKGAADEAITWTRSGKGPIILDMQTY 264 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDPA YR++EE+ +++ DPI+QVR R+L +ASE DLK I+ VR I+ + Sbjct: 265 RYRGHSMSDPAKYRSKEEVQKIKEEQDPIDQVRNRILQQGFASEDDLKSIDKEVRAIVAD 324 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 +V+FAQSD+EPD +ELY+DIL+ Sbjct: 325 AVDFAQSDQEPDASELYTDILV 346 >gi|319405529|emb|CBI79148.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella sp. AR 15-3] Length = 346 Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust. Identities = 215/342 (62%), Positives = 273/342 (79%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 AK+ + S+V + +++ F KE+E+ AYR MLLIRRFEEKAGQLYGMG++GGFC Sbjct: 5 AKKNSMSTVYAASSDTTKTAKIANFTKEEEIDAYREMLLIRRFEEKAGQLYGMGLIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAV+ G + GDQ+IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGG Sbjct: 65 HLYIGQEAVVTGTLKATKVGDQIITSYRDHGHMLAAGMSPRGVMAELTGRQGGFSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQV +G+G+AFAN+Y D + +V FGDGAANQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVPIGSGLAFANQYLGKDNVTLVYFGDGAANQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A+LW L VIY+IENNQYAMGTSVSRASA+T+FS+RG+SF IPG+ VDGMD+RAVK D Sbjct: 185 MASLWKLPVIYIIENNQYAMGTSVSRASAETDFSRRGLSFEIPGIAVDGMDVRAVKGAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 +A+ + R+ KGPII++M TYRYRGHSMSDPA YR++EE+ +++S DPI QV+ RL+ Sbjct: 245 EAIIWARSGKGPIILDMQTYRYRGHSMSDPAKYRSKEEVEKIKSEQDPINQVKSRLIKQG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WASE DLK I+ VR I+ ++ +FAQ+D EPD +ELY+DIL+ Sbjct: 305 WASEDDLKFIDKEVRAIVADAADFAQNDPEPDSSELYTDILV 346 >gi|254294050|ref|YP_003060073.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Hirschia baltica ATCC 49814] gi|254042581|gb|ACT59376.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Hirschia baltica ATCC 49814] Length = 339 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 206/316 (65%), Positives = 260/316 (82%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + E+ L YR MLLIRRFEEKAGQLYGMG++ GFCHL IGQEAV+VG++ +L EGDQ+IT Sbjct: 21 SNEEMLKYYRDMLLIRRFEEKAGQLYGMGLIAGFCHLYIGQEAVVVGVQSALIEGDQVIT 80 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+HGH+LAC ++A +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGAQVSLG Sbjct: 81 GYRDHGHMLACDMEADGVMAELTGREGGYSRGKGGSMHMFSKEKNFYGGHGIVGAQVSLG 140 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFAN+Y+++ + V FGDGAANQGQVYESFN+A+LW L +YVIENNQYAMGT+VS Sbjct: 141 TGLAFANQYKKNGNVSVSYFGDGAANQGQVYESFNMASLWKLPALYVIENNQYAMGTAVS 200 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RASA+ KRG+SF+IPG VDGMD+ V+ KA+ + R+ KGP I+EM TYRYRGH Sbjct: 201 RASAEQELYKRGISFDIPGEAVDGMDVLKVREAALKAIEHIRSGKGPYILEMKTYRYRGH 260 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR REE++++RS+HDPIE ++K+L+ +K ASE DLK I+ VR I+N S +FA Sbjct: 261 SMSDPAKYRKREEVDDIRSHHDPIEGLKKQLIESKIASEEDLKVIDKEVRVIVNKSADFA 320 Query: 348 QSDKEPDPAELYSDIL 363 Q+ EPDP+EL++D+L Sbjct: 321 QTSPEPDPSELWTDVL 336 >gi|296447123|ref|ZP_06889055.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylosinus trichosporium OB3b] gi|296255392|gb|EFH02487.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylosinus trichosporium OB3b] Length = 346 Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust. Identities = 206/321 (64%), Positives = 260/321 (80%), Gaps = 1/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V +F++EQEL+AYR MLLIRRFEEKAGQ+YGMG++GGFCHL IGQEAV+VG +M+ D Sbjct: 27 VLQFSREQELAAYRAMLLIRRFEEKAGQIYGMGLIGGFCHLYIGQEAVVVGARMAARPTD 86 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q IT YR+HGH+LACG++ ++MAELTGR+ G SKGKGGSMHMFS + FYGGHGIVGA Sbjct: 87 QFITGYRDHGHMLACGMEPKRVMAELTGRRSGYSKGKGGSMHMFSREKNFYGGHGIVGAP 146 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 LG G+AFA+ YR +D + FG+GAANQGQVYESFN+A LW L V+Y++ENN+YAMG Sbjct: 147 APLGAGLAFADLYRGTDSASLTFFGEGAANQGQVYESFNMAELWKLPVVYIVENNRYAMG 206 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV RASAQ NFSKRG +FNI G QVDGMD+RAV A + +A+ +CRA KGP +IE TYR Sbjct: 207 TSVERASAQPNFSKRGEAFNIIGRQVDGMDVRAVAAVVTEALDWCRAGKGPYLIEAKTYR 266 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR++EE+ ++R DPIEQVR RLL ASE +LK+I+ VRKI++ + Sbjct: 267 YRGHSMSDPAKYRSKEEVQKVREEQDPIEQVRARLLALG-ASEDELKQIDAAVRKIVSYA 325 Query: 344 VEFAQSDKEPDPAELYSDILI 364 +FA +D EPDP+EL++D+++ Sbjct: 326 SDFATNDAEPDPSELWTDVVL 346 >gi|114569965|ref|YP_756645.1| dehydrogenase, E1 component [Maricaulis maris MCS10] gi|114340427|gb|ABI65707.1| dehydrogenase, E1 component [Maricaulis maris MCS10] Length = 346 Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust. Identities = 201/316 (63%), Positives = 257/316 (81%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K++ L YR ML++RRFEEKAGQLYGMG++ GFCHL IGQEAV+ G++ +L EGDQ+IT Sbjct: 29 KDELLQYYRDMLMMRRFEEKAGQLYGMGLIAGFCHLYIGQEAVVTGIQAALEEGDQVITG 88 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+H H+LACG+D +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGAQV+LGT Sbjct: 89 YRDHAHMLACGMDPKGVMAELTGREGGYSRGKGGSMHMFSREKQFYGGHGIVGAQVALGT 148 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+ FA+ Y+ + K+ V FGDGAANQGQVYESFN+A LWNL VIYVIENNQYAMGTSV R Sbjct: 149 GLGFADWYKGNGKLSVAYFGDGAANQGQVYESFNMAKLWNLPVIYVIENNQYAMGTSVKR 208 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 AS++T KRG+SF IPG +VDGMD+ AVK +KAV + R GP I+EM TYRYRGHS Sbjct: 209 ASSETALHKRGISFGIPGEEVDGMDVEAVKRAAEKAVKHARGGNGPYILEMKTYRYRGHS 268 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YRTREE++++RS+HDPI+ ++KRL+ A+E +LK ++ +V+ I+N + +FA+ Sbjct: 269 MSDPAKYRTREEVDDIRSHHDPIDLIKKRLVEGGHATEDELKALDKDVKAIVNEAAQFAK 328 Query: 349 SDKEPDPAELYSDILI 364 EPDP+ELY+D+L+ Sbjct: 329 DSPEPDPSELYTDVLV 344 >gi|170743960|ref|YP_001772615.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Methylobacterium sp. 4-46] gi|168198234|gb|ACA20181.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium sp. 4-46] Length = 346 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 210/318 (66%), Positives = 261/318 (82%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F +++++ AY MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV++G++M+ EGDQ+I Sbjct: 24 FTRDEDVHAYSEMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVIGVQMASKEGDQVI 83 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HGH+LACG+D +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGAQVSL Sbjct: 84 TGYRDHGHMLACGMDPKGVMAELTGRRGGYSRGKGGSMHMFSREKNFYGGHGIVGAQVSL 143 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTG+ FANKYR + + GDGAANQGQVYESFN+A LW L V+YVIENN+YAMGTSV Sbjct: 144 GTGLGFANKYRGDGAVSLTYMGDGAANQGQVYESFNMAELWKLPVVYVIENNRYAMGTSV 203 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +RASAQT+FSKRGVSF IPG QVDGMD+RAV+ +A+A+ R+ +GP I+EM TYRYRG Sbjct: 204 TRASAQTDFSKRGVSFGIPGEQVDGMDVRAVRDAAARAIAHARSGEGPYILEMQTYRYRG 263 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRT++E+ MR DPIEQVRKRLL E ++K I+ VR+I+N + +F Sbjct: 264 HSMSDPAKYRTKDEVARMREESDPIEQVRKRLLGPHKVPENEIKAIDAQVREIVNEAADF 323 Query: 347 AQSDKEPDPAELYSDILI 364 A +D EPDPAEL++D+L+ Sbjct: 324 ATNDPEPDPAELWTDVLL 341 >gi|217976706|ref|YP_002360853.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylocella silvestris BL2] gi|217502082|gb|ACK49491.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylocella silvestris BL2] Length = 344 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 214/317 (67%), Positives = 258/317 (81%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F KEQE AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG+ M+ GDQ I Sbjct: 27 FTKEQEFKAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGVMMAAKPGDQTI 86 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HGH++ACG+D +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQV L Sbjct: 87 TSYRDHGHMIACGMDPKGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVPL 146 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTG+AFAN+YR + + FGDGAANQGQVYESFN+A LW L VI+++ENN+YAMGTSV Sbjct: 147 GTGLAFANRYRSNGNVSYTYFGDGAANQGQVYESFNMAELWKLPVIFIVENNRYAMGTSV 206 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+SA ++FSKRG SFNIPG QVDGMD+RAVKA +++A +C GPII+EM TYRYRG Sbjct: 207 KRSSAMSDFSKRGQSFNIPGEQVDGMDVRAVKAAIERARDWCVGGNGPIILEMQTYRYRG 266 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR++EE+ +MR HDPIEQVR RLL + E +LK I+ VR I+ +V+F Sbjct: 267 HSMSDPAKYRSKEEVQKMREEHDPIEQVRARLLRDHNVPEDELKAIDAEVRAIVAEAVDF 326 Query: 347 AQSDKEPDPAELYSDIL 363 A D EPDPAEL++DIL Sbjct: 327 ASHDPEPDPAELWTDIL 343 >gi|319408349|emb|CBI82002.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella schoenbuchensis R1] Length = 346 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 203/320 (63%), Positives = 264/320 (82%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + F K++ ++ YR MLLIRRFEE+AGQLYGMG++GGFCHL IGQEAV+VG + EGDQ Sbjct: 27 ASFTKDETIAVYREMLLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVVVGTLKASKEGDQ 86 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGGSMHMFS + FYGGHGIVGAQV Sbjct: 87 IITSYRDHGHMLAAGMSPRGVMAELTGRQGGFSKGKGGSMHMFSKEKNFYGGHGIVGAQV 146 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +GTG+AF+N+Y D + +V FGDGAANQGQVYESFN+A+LW L V+Y+IENNQYAMGT Sbjct: 147 PIGTGLAFSNQYLGKDNVTLVYFGDGAANQGQVYESFNMASLWKLPVVYIIENNQYAMGT 206 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SVSRASA+T+FS+RG+SF IPG+ VDGMD+ AVK D+A+A+ R+ KGPII++M TYRY Sbjct: 207 SVSRASAETDFSRRGLSFEIPGIVVDGMDVHAVKGAADEAIAWARSGKGPIILDMQTYRY 266 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR++EE+ +++ DPI+Q+++ ++ W SE DLK I+ VR I+ ++ Sbjct: 267 RGHSMSDPAKYRSKEEVQKIKEEQDPIDQIKQHVIKQGWVSEDDLKSIDKEVRAIVADAA 326 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FAQ+D+EPD +ELY+DIL+ Sbjct: 327 DFAQNDQEPDASELYTDILV 346 >gi|49474127|ref|YP_032169.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella quintana str. Toulouse] gi|49239631|emb|CAF25990.1| Pyruvate dehydrogenase E1 component, alpha subunit [Bartonella quintana str. Toulouse] Length = 346 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 207/322 (64%), Positives = 268/322 (83%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 +++ F KE+E+ +YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV++G + EG Sbjct: 25 QIARFTKEEEIHSYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVIGTLKAAKEG 84 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 DQ+IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGGSMHMFS + FYGGHGIVGA Sbjct: 85 DQVITSYRDHGHMLAVGMSPRGVMAELTGRQGGFSKGKGGSMHMFSKEKNFYGGHGIVGA 144 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV +G+G+AF+N+Y D + +V FGDGAANQGQVYESFN+A+LW L V+Y+IENNQYAM Sbjct: 145 QVPIGSGLAFSNQYLGKDNVTLVYFGDGAANQGQVYESFNMASLWKLPVVYIIENNQYAM 204 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV RASA+ +FS+RG+SF+IPG+ VDGMD+RAVK D+A+ + R+ KGPII++M TY Sbjct: 205 GTSVVRASAEIDFSRRGLSFDIPGIVVDGMDVRAVKGAADEAITWARSGKGPIILDMQTY 264 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDPA YR++EE+ +++ DPI+QV+ R+L +ASEGDLK I+ VR II + Sbjct: 265 RYRGHSMSDPAKYRSKEEVQKIKEEQDPIDQVKNRILTQGFASEGDLKSIDKEVRAIIAD 324 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 + +FAQSD+EPD +ELY+D+L+ Sbjct: 325 AADFAQSDQEPDASELYTDVLV 346 >gi|121602213|ref|YP_988849.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella bacilliformis KC583] gi|120614390|gb|ABM44991.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella bacilliformis KC583] Length = 350 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 205/322 (63%), Positives = 268/322 (83%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 +++ F KE+E++AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+ G + EG Sbjct: 29 QIAHFTKEEEINAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVTGTLKAAKEG 88 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 DQ+IT+YR+HGH+LA G+ +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGA Sbjct: 89 DQIITSYRDHGHMLAAGMSPRGVMAELTGRRGGFSKGKGGSMHMFSKEKDFYGGHGIVGA 148 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QVSLGTG+AF+N+Y + D + +V FGDGAANQGQVYESFN+A+LW L V+YVIENNQYAM Sbjct: 149 QVSLGTGLAFSNQYLKKDNVALVYFGDGAANQGQVYESFNMASLWKLPVVYVIENNQYAM 208 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R++A +FS+RG+SF IPG+ VDGMD+ AVK D+A+++ R+ KGPII+++ TY Sbjct: 209 GTSVVRSAAGADFSRRGLSFEIPGIAVDGMDVCAVKGAADEAISWARSGKGPIILDIQTY 268 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDPA YR+++E+ ++++ HDPIEQV+ R++ WASE DLK I+ VR ++ + Sbjct: 269 RYRGHSMSDPAKYRSKDEVEKVKTEHDPIEQVKNRIIKQGWASEDDLKSIDKEVRAVVAD 328 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 + +FAQ+D+EPD ELY+DIL+ Sbjct: 329 AADFAQNDQEPDAFELYTDILV 350 >gi|163793249|ref|ZP_02187225.1| 2-dehydro-3-deoxyphosphooctonate aldolase [alpha proteobacterium BAL199] gi|159181895|gb|EDP66407.1| 2-dehydro-3-deoxyphosphooctonate aldolase [alpha proteobacterium BAL199] Length = 351 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 195/320 (60%), Positives = 257/320 (80%), Gaps = 1/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 SE + EQ + YR ML+IRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+ ++ EGD Sbjct: 31 SEPSVEQLVDYYRDMLVIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQAAIGEGDT 90 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 ++T+YR+HGH+LA G++A +MAELTGR GG S+GKGGSMHMFS + F+GGHGIVGAQV Sbjct: 91 VVTSYRDHGHMLATGMEARGVMAELTGRIGGYSRGKGGSMHMFSREKNFFGGHGIVGAQV 150 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +GTG+AF ++YR SD++ + GDGA NQGQVYESFN+AALW L VI++IENN+Y MGT Sbjct: 151 PIGTGLAFNHRYRGSDRVSLTYMGDGAVNQGQVYESFNMAALWKLPVIFIIENNKYGMGT 210 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV+RA+A + ++RG ++ IPG ++DGM + AVKA DKAVAYCRA KGP I+EM TYRY Sbjct: 211 SVTRAAAGPSLAERGHAYGIPGEEIDGMSVTAVKAAGDKAVAYCRAGKGPYILEMKTYRY 270 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR++EE+N+MR HDPI+ +R+ L+ K E LK+++ V+ ++ ++ Sbjct: 271 RGHSMSDPAKYRSKEEVNKMRQEHDPIDSLRRVLIERK-VDEETLKKVDREVKDLVTDAA 329 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FAQ EPD AEL++DIL+ Sbjct: 330 DFAQQSPEPDVAELWTDILV 349 >gi|218461962|ref|ZP_03502053.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhizobium etli Kim 5] Length = 302 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 194/278 (69%), Positives = 239/278 (85%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V++F++++EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 25 GGPVADFDRDEELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAQK 84 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 EGDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GKGGSMHMFS + FYGGHGIV Sbjct: 85 EGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGKGGSMHMFSKEKHFYGGHGIV 144 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN+YR + + + FGDGAANQGQVYESFN+AALW L ++Y++ENN+Y Sbjct: 145 GAQVSLGTGLAFANRYRNNGNVAIAYFGDGAANQGQVYESFNMAALWKLPIVYIVENNRY 204 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS +RA+AQ+N+S RG F IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EML Sbjct: 205 AMGTSTARATAQSNYSLRGSGFGIPGIQVDGMDVRAVKAAADEALEHCRSGKGPIILEML 264 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 TYRYRGHSMSDPA YR++EE+ +MRS DPIEQV+ RL Sbjct: 265 TYRYRGHSMSDPAKYRSKEEVQKMRSEQDPIEQVKARL 302 >gi|254487912|ref|ZP_05101117.1| pyruvate dehydrogenase E1 component, alpha subunit [Roseobacter sp. GAI101] gi|214044781|gb|EEB85419.1| pyruvate dehydrogenase E1 component, alpha subunit [Roseobacter sp. GAI101] Length = 336 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 196/313 (62%), Positives = 247/313 (78%), Gaps = 1/313 (0%) Query: 51 QELSAY-RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 +EL AY + MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD IT Y Sbjct: 15 EELKAYYKDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEATAKEGDSRITTY 74 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+HGH+LACG++ +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGA V LG G Sbjct: 75 RDHGHMLACGMNPDGVMAELTGREGGYSRGKGGSMHMFSKEKKFYGGHGIVGANVPLGAG 134 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +AFA+KY+ +D + FGDGAANQGQVYE+FN+AALW L VI+VIENNQYAMGTS R+ Sbjct: 135 VAFADKYKGNDNVTFTYFGDGAANQGQVYETFNMAALWKLPVIFVIENNQYAMGTSQQRS 194 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 ++ +RG +F IPG VDGMD+ AVK ++AV + R+ GP I+E+ TYRYRGHSM Sbjct: 195 TSSAEIWERGKAFGIPGEAVDGMDVLAVKDAGERAVKHARSGDGPYILEIKTYRYRGHSM 254 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA YRTREE+ +MR DPIEQVR LL +K+A+E DLK I+ ++K++N+S EFA++ Sbjct: 255 SDPAKYRTREEVQKMRDERDPIEQVRNILLESKYATEDDLKAIDKEIKKVVNDSAEFAKN 314 Query: 350 DKEPDPAELYSDI 362 EP P EL++DI Sbjct: 315 SPEPAPEELWTDI 327 >gi|149913852|ref|ZP_01902384.1| anhydro-N-acetylmuramic acid kinase [Roseobacter sp. AzwK-3b] gi|149812136|gb|EDM71967.1| anhydro-N-acetylmuramic acid kinase [Roseobacter sp. AzwK-3b] Length = 336 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 196/307 (63%), Positives = 241/307 (78%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT YR+HGH+ Sbjct: 21 YRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEATAEEGDKRITTYRDHGHM 80 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LACG+D +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGA V LG G+AFA+K Sbjct: 81 LACGMDPKGVMAELTGREGGYSRGKGGSMHMFSKEKHFYGGHGIVGANVPLGAGLAFADK 140 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y +D++ FGDGAANQGQVYE+FN+AALW L VI+VIENNQYAMGTS R+++ + Sbjct: 141 YLGNDRVTYTYFGDGAANQGQVYETFNMAALWQLPVIFVIENNQYAMGTSQKRSTSSPDI 200 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 RG +F IPG VDGMD+ AV+ KAVA+CR+ KGP I+E+ TYRYRGHSMSDPA Y Sbjct: 201 YTRGAAFGIPGEAVDGMDVLAVRDAGQKAVAHCRSGKGPYILEIKTYRYRGHSMSDPAKY 260 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREE+ +MR D IE VR LL K A+E DLK I+ ++ I+N + EF++ EPDP Sbjct: 261 RTREEVQKMREEKDAIEHVRDLLLSGKHATEDDLKAIDKEIKAIVNEAAEFSKDSPEPDP 320 Query: 356 AELYSDI 362 AEL++DI Sbjct: 321 AELWTDI 327 >gi|83954327|ref|ZP_00963047.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Sulfitobacter sp. NAS-14.1] gi|83841364|gb|EAP80534.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Sulfitobacter sp. NAS-14.1] Length = 336 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 197/313 (62%), Positives = 244/313 (77%), Gaps = 1/313 (0%) Query: 51 QELSAY-RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 +EL AY R MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + +GD IT Y Sbjct: 15 EELKAYYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEATTKDGDSRITTY 74 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+HGH+LACG++ +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGA V LG G Sbjct: 75 RDHGHMLACGMNPDGVMAELTGREGGYSRGKGGSMHMFSKEKKFYGGHGIVGANVPLGAG 134 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 IAFA+KY+ +D + FGDGAANQGQVYE+FN+AALW L VI++IENNQYAMGTS R+ Sbjct: 135 IAFADKYKGNDNVTFTYFGDGAANQGQVYETFNMAALWKLPVIFIIENNQYAMGTSQQRS 194 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 ++ +RG +F IPG VDGMD+ AVK ++AV +CR+ GP I+E+ TYRYRGHSM Sbjct: 195 TSSAEIWERGKAFGIPGEAVDGMDVLAVKDAGERAVKHCRSGDGPYILEIKTYRYRGHSM 254 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA YRTREE+ +MR DPIEQVR LL +K ASE DLK I+ +++I+N S EFA+ Sbjct: 255 SDPAKYRTREEVQKMRDERDPIEQVRNILLEHKHASEDDLKAIDKEIKEIVNASAEFAKE 314 Query: 350 DKEPDPAELYSDI 362 EP EL++DI Sbjct: 315 SPEPAAEELWTDI 327 >gi|83858352|ref|ZP_00951874.1| pyruvate dehydrogenase complex, E1 component, pyruvatedehydrogenase alpha subunit [Oceanicaulis alexandrii HTCC2633] gi|83853175|gb|EAP91027.1| pyruvate dehydrogenase complex, E1 component, pyruvatedehydrogenase alpha subunit [Oceanicaulis alexandrii HTCC2633] Length = 342 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 199/319 (62%), Positives = 257/319 (80%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + ++Q +S Y+ MLL+RRFEEKAGQLYGMG++ GFCHL IGQEAV+VG++ +L EGDQ+ Sbjct: 22 DVTEDQLMSWYKDMLLMRRFEEKAGQLYGMGLIAGFCHLYIGQEAVVVGVQGALEEGDQV 81 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT YR+H H+LA G+D + +MAELTGR+GG SKGKGGSMHMFS F+GGHGIVGAQV Sbjct: 82 ITGYRDHAHMLATGMDPNGVMAELTGREGGYSKGKGGSMHMFSRDKQFFGGHGIVGAQVP 141 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +GTG+AF+NKY+++ K+C FGDGAANQGQVYESFN+A LWNL V+Y+IENNQYAMGTS Sbjct: 142 IGTGLAFSNKYKKNGKVCAAYFGDGAANQGQVYESFNMAKLWNLPVVYIIENNQYAMGTS 201 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V+RAS++T+ KRG SF IPG +VDGMD+ AV +AV + R+ +GP I+EM TYRYR Sbjct: 202 VARASSETHLHKRGASFGIPGEEVDGMDVTAVYDAAKRAVEHARSGEGPFILEMKTYRYR 261 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YRTR+E+N++R + DPI+ RK +L W+ E LKE++ V+ I+N S + Sbjct: 262 GHSMSDPAKYRTRDEVNDIRDHKDPIDLARKIILEKGWSDEDALKEMDKEVKAIVNKSAD 321 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ EPDP+ELY+D+LI Sbjct: 322 FAKDSPEPDPSELYTDVLI 340 >gi|83943192|ref|ZP_00955652.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Sulfitobacter sp. EE-36] gi|83846200|gb|EAP84077.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Sulfitobacter sp. EE-36] Length = 336 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 197/313 (62%), Positives = 244/313 (77%), Gaps = 1/313 (0%) Query: 51 QELSAY-RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 +EL AY R MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + +GD IT Y Sbjct: 15 EELKAYYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEATAKDGDSRITTY 74 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+HGH+LACG++ +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGA V LG G Sbjct: 75 RDHGHMLACGMNPDGVMAELTGREGGYSRGKGGSMHMFSKEKKFYGGHGIVGANVPLGAG 134 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 IAFA+KY+ +D + FGDGAANQGQVYE+FN+AALW L VI++IENNQYAMGTS R+ Sbjct: 135 IAFADKYKGNDNVTFTYFGDGAANQGQVYETFNMAALWKLPVIFIIENNQYAMGTSQQRS 194 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 ++ +RG +F IPG VDGMD+ AVK ++AV +CR+ GP I+E+ TYRYRGHSM Sbjct: 195 TSSAEIWERGKAFGIPGEAVDGMDVLAVKDAGERAVKHCRSGDGPYILEIKTYRYRGHSM 254 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA YRTREE+ +MR DPIEQVR LL +K ASE DLK I+ +++I+N S EFA+ Sbjct: 255 SDPAKYRTREEVQKMRDERDPIEQVRNILLEHKHASEDDLKAIDKEIKEIVNASAEFAKE 314 Query: 350 DKEPDPAELYSDI 362 EP EL++DI Sbjct: 315 SPEPAAEELWTDI 327 >gi|114799576|ref|YP_760677.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase subunit alpha [Hyphomonas neptunium ATCC 15444] gi|114739750|gb|ABI77875.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, alpha subunit [Hyphomonas neptunium ATCC 15444] Length = 336 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 194/312 (62%), Positives = 246/312 (78%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ YR MLLIRRFEEKAGQLYGMG + GFCHL IGQEAV+ GM+ L EGDQ+IT YR+H Sbjct: 21 LAFYREMLLIRRFEEKAGQLYGMGKIAGFCHLYIGQEAVVTGMQACLKEGDQVITGYRDH 80 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH+LAC +D +MAELTGR GG S+GKGGSMHMFS + FYGGHGIVGAQV LGTG+AF Sbjct: 81 GHMLACQMDPKGVMAELTGRVGGYSRGKGGSMHMFSKEKNFYGGHGIVGAQVPLGTGLAF 140 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 ANKYR +D + + FGDGAANQGQVYE+FN+A+LW L V+YVIENN YAMGTSV R +++ Sbjct: 141 ANKYRGNDNVSLAYFGDGAANQGQVYEAFNMASLWKLPVVYVIENNMYAMGTSVERHASE 200 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 KRG+SF I G +VDGMD+ AV+ +KAV + RA KGP I+EM TYRYRGHSMSDP Sbjct: 201 VELFKRGISFEIEGEEVDGMDVLAVREAGEKAVKHARAGKGPYILEMKTYRYRGHSMSDP 260 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 A YR REE++++RS+HDPIE ++ ++L A+E +LK+I+ ++ I+ + +F+ E Sbjct: 261 AKYRKREEVDDIRSHHDPIEGLKGQILEQGHATEDELKKIDNEIKAIVKEAADFSLESPE 320 Query: 353 PDPAELYSDILI 364 PD +EL++D+LI Sbjct: 321 PDASELWTDVLI 332 >gi|85708700|ref|ZP_01039766.1| pyruvate dehydrogenase E1 component alpha subunit [Erythrobacter sp. NAP1] gi|85690234|gb|EAQ30237.1| pyruvate dehydrogenase E1 component alpha subunit [Erythrobacter sp. NAP1] Length = 366 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 198/343 (57%), Positives = 261/343 (76%), Gaps = 5/343 (1%) Query: 26 AATSSVDCVDIPFLEGFEVSE---FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 A + D + E FE ++ + EQ L YR MLLIRRFEEKAGQLYG+G++GGFC Sbjct: 22 APSDDPDFILHSLQEEFEAAKSYAASDEQLLEFYRQMLLIRRFEEKAGQLYGLGLIGGFC 81 Query: 83 HLCIGQEAVIVGMKMSL-TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKG 141 HL IGQEAV +G++ +L + D +IT YR+HGH+LA G+D IMAELTGR+ GISKGKG Sbjct: 82 HLYIGQEAVAIGLQSALDNDRDSVITGYRDHGHMLAYGIDPKVIMAELTGREAGISKGKG 141 Query: 142 GSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF 201 GSMHMFST++ FYGGHGIVGAQV+LG G+A A++Y +C+ FGDGAANQGQVYE+F Sbjct: 142 GSMHMFSTEHKFYGGHGIVGAQVALGGGLALAHQYNEDGGLCLAYFGDGAANQGQVYETF 201 Query: 202 NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 N+AALWNL +++V+E+NQYAMGT+ SR+SA+T F +RG +F IPGM+V+GMD+ V+A Sbjct: 202 NMAALWNLPIVFVVEDNQYAMGTASSRSSAETRFHRRGTAFRIPGMEVNGMDVLEVRAAA 261 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHN 321 + A + R KGP+++E TYRYRGHSMSDPA YRTREE+ E R +HDPIE+++K L+ Sbjct: 262 EVAFKHVREGKGPVLMECNTYRYRGHSMSDPAKYRTREEVQEQRDHHDPIERLKKSLIEG 321 Query: 322 KWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 A E DLK I+ ++RKI+ + +FA+S EP P ELY+D+L+ Sbjct: 322 GHAEE-DLKAIDKDIRKIVTEAADFAESSPEPGPDELYTDVLV 363 >gi|254439388|ref|ZP_05052882.1| pyruvate dehydrogenase E1 component, alpha subunit [Octadecabacter antarcticus 307] gi|198254834|gb|EDY79148.1| pyruvate dehydrogenase E1 component, alpha subunit [Octadecabacter antarcticus 307] Length = 338 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 195/327 (59%), Positives = 248/327 (75%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 +P + + + E+ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG+ Sbjct: 1 MPAKKTLKKPNVSAEELLGYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGL 60 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 + + EGD+ IT YR+HGH+LACG+D +MAELTGRQ G S+GKGGSMHMFS + FYG Sbjct: 61 EAATKEGDKRITTYRDHGHMLACGMDPKGVMAELTGRQDGYSRGKGGSMHMFSAEKHFYG 120 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 GHGIVGA V LG G+AF++KYR +D + FGDGAANQGQVYE+FN+AALW+L VI+VI Sbjct: 121 GHGIVGANVPLGAGLAFSDKYRGNDNVTFTYFGDGAANQGQVYETFNMAALWDLPVIFVI 180 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENNQYAMGTS +R+++ + RG +F IPG VDGM++ AVK +KAVA+CR+ GP Sbjct: 181 ENNQYAMGTSQARSTSTPDLYTRGEAFGIPGEIVDGMNVLAVKEASEKAVAHCRSGAGPY 240 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 ++E+ TYRYRGHSMSDPA YRTR+E+ +MR DPIEQVR LL K A+E DLK I+ Sbjct: 241 VLEVKTYRYRGHSMSDPAKYRTRDEVQKMREERDPIEQVRSLLLTGKHATEDDLKAIDKE 300 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 ++ +N + EFA+ EP EL++DI Sbjct: 301 IKATVNEAAEFAKESPEPHLDELWTDI 327 >gi|87199925|ref|YP_497182.1| pyruvate dehydrogenase (lipoamide) [Novosphingobium aromaticivorans DSM 12444] gi|87135606|gb|ABD26348.1| Pyruvate dehydrogenase (lipoamide) [Novosphingobium aromaticivorans DSM 12444] Length = 381 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 193/313 (61%), Positives = 244/313 (77%), Gaps = 2/313 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 L Y M+LIRRFEEKAGQLYG+G++GGFCHL IGQEAV VG++ +L EG D +IT YR+ Sbjct: 67 LKFYEQMVLIRRFEEKAGQLYGLGLIGGFCHLYIGQEAVAVGLQSALKEGHDSVITGYRD 126 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 HGH+LA G+D IMAELTGR GIS+GKGGSMHMFST + FYGGHGIVGAQV LG G+A Sbjct: 127 HGHMLAYGIDPKVIMAELTGRGAGISRGKGGSMHMFSTDHKFYGGHGIVGAQVPLGAGLA 186 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 FA+KYR D +C+ FGDGAANQGQVYE+FN+AALW L +I+V+ENN YAMGT+V R SA Sbjct: 187 FAHKYRGDDGVCMAYFGDGAANQGQVYETFNMAALWKLPIIFVVENNGYAMGTAVKRGSA 246 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +T F +RG +F IPGM V+GMD+ V+ + A+ Y RA GP+++E+ TYRYRGHSMSD Sbjct: 247 ETEFYRRGTAFRIPGMDVNGMDVLEVRQAAEVALEYVRAGNGPVLMELNTYRYRGHSMSD 306 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 PA YR+REE+ EMR HDPIE + LL + +E +KEI+ +R+I+ S +FA++ Sbjct: 307 PAKYRSREEVQEMRDKHDPIEGAKAELL-KRGVTEDKIKEIDKRIRQIVAESADFAETSP 365 Query: 352 EPDPAELYSDILI 364 EPD AELY+D+L+ Sbjct: 366 EPDMAELYTDVLV 378 >gi|254460798|ref|ZP_05074214.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacterales bacterium HTCC2083] gi|206677387|gb|EDZ41874.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacteraceae bacterium HTCC2083] Length = 333 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 194/310 (62%), Positives = 243/310 (78%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L Y+ MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT+YR+H Sbjct: 18 LQHYKDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDKRITSYRDH 77 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH+LACG+D + +MAELTGR G SKGKGGSMHMFS + FYGGHGIV AQV LG G+AF Sbjct: 78 GHMLACGMDPNGVMAELTGRIDGYSKGKGGSMHMFSKEKHFYGGHGIVAAQVPLGAGLAF 137 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+KY+ + ++ FGDGAANQGQVYE+FN+AA+W+L I+VIENNQYAMGTS R+++ Sbjct: 138 ADKYQDNGRVTFTYFGDGAANQGQVYETFNMAAIWDLPCIFVIENNQYAMGTSQDRSTST 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG +F IPG VDGMD+ AVK ++AV +CR+ KGP I+E+ TYRYRGHSMSDP Sbjct: 198 PDLHTRGEAFGIPGEIVDGMDVMAVKEAGERAVKHCRSGKGPYILEIKTYRYRGHSMSDP 257 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 A YRTREE+ +MR DPIEQVR LL K ASE DLK I+ ++K++N S EFA+ Sbjct: 258 AKYRTREEVQKMRDERDPIEQVRDVLLTGKHASEDDLKAIDKEIKKVVNASAEFAKDSPL 317 Query: 353 PDPAELYSDI 362 PD +EL++DI Sbjct: 318 PDVSELWTDI 327 >gi|294083775|ref|YP_003550532.1| pyruvate dehydrogenase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663347|gb|ADE38448.1| Pyruvate dehydrogenase (acetyl-transferring) [Candidatus Puniceispirillum marinum IMCC1322] Length = 356 Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust. Identities = 185/309 (59%), Positives = 249/309 (80%), Gaps = 1/309 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R MLLIRRFEEKAGQ+YGMG +GGFCHL IGQEAV+VG++ + EGD ++T+YR+HGH+ Sbjct: 37 FRDMLLIRRFEEKAGQMYGMGQIGGFCHLYIGQEAVVVGLQSASVEGDTVVTSYRDHGHM 96 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LACG++A +MAELTGR+GG S+GKGGSMHMFS + F+GGHGIVGAQV +G G+AF++K Sbjct: 97 LACGMEADGVMAELTGREGGYSRGKGGSMHMFSREKNFFGGHGIVGAQVPIGVGLAFSHK 156 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y+ +C+ GDGA NQGQVYESFN+AALW+L +++IENNQY MGT+V+RA+A Sbjct: 157 YKGQKNVCMTYLGDGAVNQGQVYESFNMAALWDLPCLFIIENNQYGMGTAVTRAAAGRAL 216 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + RG+++ IPG QVDGMD+ AV+A +A+ +CR+ KGP I+EM TYRYRGHSMSDPA Y Sbjct: 217 ADRGMAYGIPGKQVDGMDVLAVRAAALEALDHCRSGKGPYILEMKTYRYRGHSMSDPAKY 276 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREE++ MR HDPI+Q+R+ +L N+ + +LK I+ V+ I+ ++ EFAQ+ EPD Sbjct: 277 RTREEVDTMRKQHDPIDQLRE-ILQNQNVKDEELKAIDSEVKAIVTDATEFAQTSPEPDA 335 Query: 356 AELYSDILI 364 +EL++DIL+ Sbjct: 336 SELFTDILL 344 >gi|149201839|ref|ZP_01878813.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseovarius sp. TM1035] gi|149144887|gb|EDM32916.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseovarius sp. TM1035] Length = 336 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/308 (62%), Positives = 240/308 (77%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT YR+HGH+ Sbjct: 21 YRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDRRITTYRDHGHM 80 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LACG+D + +MAELTGR+GG S+GKGGSMHMFST+ FYGGHGIVGA V LG G+AFA+K Sbjct: 81 LACGMDPNGVMAELTGREGGYSRGKGGSMHMFSTEKRFYGGHGIVGANVPLGAGLAFADK 140 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y +D++ FGDGAANQGQVYE+FN+AALW L VI+VIENNQYAMGTS R+++ + Sbjct: 141 YLGNDRVTFTYFGDGAANQGQVYETFNMAALWQLPVIFVIENNQYAMGTSQKRSTSSPDI 200 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 RG +F IPG VDGMD+ AVK DKAVA+CR+ GP I+E+ TYRYRGHSMSDPA Y Sbjct: 201 YTRGQAFGIPGEAVDGMDVLAVKEAGDKAVAHCRSGAGPYILEIKTYRYRGHSMSDPAKY 260 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREE+ +MR D IE VR L+ A+E DLK I+ ++ ++N S EFA+ EP Sbjct: 261 RTREEVQKMREEKDAIEHVRDLLVSGGHATEEDLKAIDKEIKDVVNASAEFAKESPEPAL 320 Query: 356 AELYSDIL 363 EL++DI+ Sbjct: 321 DELWTDII 328 >gi|85706336|ref|ZP_01037430.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseovarius sp. 217] gi|85669109|gb|EAQ23976.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseovarius sp. 217] Length = 336 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 193/308 (62%), Positives = 242/308 (78%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + +GD+ IT YR+HGH+ Sbjct: 21 YRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEDGDRRITTYRDHGHM 80 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LACG+D +MAELTGR+GG S+GKGGSMHMFST+ FYGGHGIVGA V LG G+AFA+K Sbjct: 81 LACGMDPKGVMAELTGREGGYSRGKGGSMHMFSTEKRFYGGHGIVGANVPLGAGLAFADK 140 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y +D++ FGDGAANQGQVYE+FN+AALW+L VI+VIENNQYAMGTS R+++ + Sbjct: 141 YLGNDRVTFTYFGDGAANQGQVYETFNMAALWSLPVIFVIENNQYAMGTSQQRSTSSPDI 200 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 RG +F IPG VDGMD+ AVK DKAVA+CR+ GP I+E+ TYRYRGHSMSDPA Y Sbjct: 201 YHRGEAFGIPGEMVDGMDVLAVKEAGDKAVAHCRSGAGPYILEIKTYRYRGHSMSDPAKY 260 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREE+ +MR D IE VR L+ A+E DLK I+ ++++++N S EFA+ EP Sbjct: 261 RTREEVQKMRDEKDAIEHVRDLLISGGHATEEDLKAIDKDIKEVVNASAEFAKESPEPAI 320 Query: 356 AELYSDIL 363 EL++DI+ Sbjct: 321 EELWTDII 328 >gi|296284153|ref|ZP_06862151.1| pyruvate dehydrogenase E1 component alpha subunit [Citromicrobium bathyomarinum JL354] Length = 362 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 199/360 (55%), Positives = 263/360 (73%), Gaps = 11/360 (3%) Query: 15 MALNPSVSAKRAATSSVDCVDIP-FLEGFEVSEFNK--------EQELSAYRLMLLIRRF 65 MA P+ A ++ VD P F+ EF+K EQ L Y MLLIRRF Sbjct: 1 MAKKPAAKKSPAKAENLAAVDDPDFVLHSLQEEFDKNKLYDASEEQMLHFYEQMLLIRRF 60 Query: 66 EEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMITAYREHGHILACGVDASK 124 EE+AGQLYG+G++GGFCHL IGQEAV +G++ +L + D +IT YR+HGH+LA G+D Sbjct: 61 EERAGQLYGLGLIGGFCHLYIGQEAVAIGLQSALDNDKDSVITGYRDHGHMLAYGIDPKV 120 Query: 125 IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 IM+ELTGRQ GISKGKGGSMHMFST++ FYGGHGIVGAQV LG G+AFA+KY IC+ Sbjct: 121 IMSELTGRQAGISKGKGGSMHMFSTEHKFYGGHGIVGAQVPLGAGLAFAHKYNEDGGICL 180 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 FGDGAANQGQVYE+FN+AALWNL + +V+E+NQYAMGT+ R+SA+T F +RG SF I Sbjct: 181 AYFGDGAANQGQVYEAFNMAALWNLPICFVVEDNQYAMGTATKRSSAETRFYRRGTSFRI 240 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEM 304 PGM+VDGM++ V+ + A + R GP+++E TYRYRGHSMSDPA YRTREE+ + Sbjct: 241 PGMEVDGMNVLEVRQAAEVAFKHIREGNGPVLMECNTYRYRGHSMSDPAKYRTREEVQDQ 300 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 + +HDPIE+++K L+ K SE +LKEI+ +R ++ + +FA++ EP+ AELY+D+L+ Sbjct: 301 KEHHDPIERIKKTLI-EKGKSEDELKEIDKGIRSQVSEAADFAENSPEPEAAELYTDVLV 359 >gi|85374108|ref|YP_458170.1| pyruvate dehydrogenase E1 component alpha subunit [Erythrobacter litoralis HTCC2594] gi|84787191|gb|ABC63373.1| pyruvate dehydrogenase E1 component alpha subunit [Erythrobacter litoralis HTCC2594] Length = 365 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 200/349 (57%), Positives = 261/349 (74%), Gaps = 6/349 (1%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQE---LSAYRLMLLIRRFEEKAGQLYGMG 76 SV AAT D V E FE ++ K + L Y MLLIRRFEE+AGQLYG+G Sbjct: 16 SVKPNPAATDE-DFVLHSLQEEFEKNKRYKASDKEMLDFYEQMLLIRRFEERAGQLYGLG 74 Query: 77 MVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 ++GGFCHL IGQEAV +G++ +L + D +IT YR+HGH+LA G+D IMAELTGR+ G Sbjct: 75 LIGGFCHLYIGQEAVAIGLQSALDGDKDSVITGYRDHGHMLAYGIDPKVIMAELTGREAG 134 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG 195 ISKGKGGSMHMFST++ FYGGHGIVGAQV+LG G+AFA+KY IC+ FGDGAANQG Sbjct: 135 ISKGKGGSMHMFSTEHKFYGGHGIVGAQVALGGGLAFAHKYNEDGGICLAYFGDGAANQG 194 Query: 196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIR 255 QVYE+FN+AALWNL +++V+E+NQYAMGTS R+SA+T F +RG SF IPGM+V+GMD+ Sbjct: 195 QVYETFNMAALWNLPIVFVVEDNQYAMGTSTKRSSAETRFYRRGTSFRIPGMEVNGMDVL 254 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVR 315 V+A + A + R GP+++E TYRYRGHSMSDPA YRTREE+ + R +HDPIE ++ Sbjct: 255 EVRAAAEIAFKHVREGNGPVLMECNTYRYRGHSMSDPAKYRTREEVQDQRDHHDPIEGLK 314 Query: 316 KRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 K L+ + SE DLK I+ +R ++ + +FA++ EPDP+ELY+D+L+ Sbjct: 315 KALI-EQGKSEDDLKAIDKAIRAQVSEAADFAENSPEPDPSELYTDVLV 362 >gi|209542347|ref|YP_002274576.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Gluconacetobacter diazotrophicus PAl 5] gi|209530024|gb|ACI49961.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 336 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 189/318 (59%), Positives = 249/318 (78%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE A+ M+LIRRFEE+AGQLYGMG++GGFCHL IGQEAV+VG++M L +GD++I Sbjct: 18 MSKEDLTRAFHDMVLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVVVGVQMELKQGDKII 77 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HG +LA G+D +MAELTGR+GG S+GKGGSMHMFS++ FYGGHGIVGAQVSL Sbjct: 78 TSYRDHGQMLAAGMDPRGVMAELTGREGGYSRGKGGSMHMFSSEKHFYGGHGIVGAQVSL 137 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AFANKYR +D++ + FG+GA++QGQVYESFN+AAL L ++V+ENN Y MGTSV Sbjct: 138 GIGLAFANKYRGTDEVSIAYFGEGASSQGQVYESFNLAALHKLPCVFVLENNHYGMGTSV 197 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+SA + G + IPG QVDGMD+ AV+ +A+ +CR KGP ++EM TYRYRG Sbjct: 198 ERSSASKELWRNGEPWGIPGRQVDGMDVEAVRDAAREAIEHCRQGKGPYLLEMTTYRYRG 257 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR R E++EMR NHDPI++VRK LL E +LK IE V++++ ++ +F Sbjct: 258 HSMSDPAKYRPRSEVDEMRKNHDPIDRVRKELL-AMGVGEAELKTIEDKVKEVVVDAADF 316 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ EPDPAEL++D+L+ Sbjct: 317 AQTSPEPDPAELWTDVLV 334 >gi|254452935|ref|ZP_05066372.1| pyruvate dehydrogenase E1 component, alpha subunit [Octadecabacter antarcticus 238] gi|198267341|gb|EDY91611.1| pyruvate dehydrogenase E1 component, alpha subunit [Octadecabacter antarcticus 238] Length = 337 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 192/310 (61%), Positives = 239/310 (77%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + +GD+ IT YR+H Sbjct: 18 LGYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAATKKGDKRITTYRDH 77 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH+LACG+D +MAELTGRQ G SKGKGGSMHMFS + FYGGHGIVGA V LG G+AF Sbjct: 78 GHMLACGMDPKGVMAELTGRQDGYSKGKGGSMHMFSKEKDFYGGHGIVGANVPLGAGLAF 137 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 ++KYR +D + FGDGAANQGQVYE+FN+AALW+L VI+VIENNQYAMGTS R+++ Sbjct: 138 SDKYRGNDNVTFTYFGDGAANQGQVYETFNMAALWDLPVIFVIENNQYAMGTSQKRSTST 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG +F IPG VDGM++ AVK +KAVA+CR+ GP ++E+ TYRYRGHSMSDP Sbjct: 198 PDLYTRGEAFGIPGEIVDGMNVLAVKEASEKAVAHCRSGAGPYVLEVKTYRYRGHSMSDP 257 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 A YRTR+E+ +MR DPIEQVR LL K A+E DLK I+ ++ +N + EFA+ Sbjct: 258 AKYRTRDEVQKMREERDPIEQVRSLLLTGKHATEDDLKAIDKEIKATVNEAAEFAKESPI 317 Query: 353 PDPAELYSDI 362 P EL++DI Sbjct: 318 PHLDELWTDI 327 >gi|310815650|ref|YP_003963614.1| pyruvate dehydrogenase (lipoamide) [Ketogulonicigenium vulgare Y25] gi|308754385|gb|ADO42314.1| pyruvate dehydrogenase (lipoamide) [Ketogulonicigenium vulgare Y25] Length = 340 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 195/347 (56%), Positives = 259/347 (74%), Gaps = 14/347 (4%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 ++ ++AA S+ D S E L YR M+LIRRFEEKAGQLYGMG++GG Sbjct: 1 MAPRKAAASTSDATK---------SNVASEDLLKYYREMMLIRRFEEKAGQLYGMGLIGG 51 Query: 81 FCHL-----CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 FCHL +GQEAV+VG++ + +EGD+ +T+YR+HGH+LACG+DA +MAELTGR+GG Sbjct: 52 FCHLYIGQEAVGQEAVVVGLEAAASEGDKRVTSYRDHGHMLACGMDAKGVMAELTGREGG 111 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG 195 S+GKGGSMHMFS FYGGHGIVGAQV +G G+AFA+KY +D++ FGDGAANQG Sbjct: 112 YSRGKGGSMHMFSKDRHFYGGHGIVGAQVPIGAGLAFADKYLGNDRVTFAYFGDGAANQG 171 Query: 196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIR 255 QVYE++N+A LW+L VI+VIENNQYAMGTSV R++ + KRG ++ I G +VDGMD+ Sbjct: 172 QVYETYNMAQLWDLPVIFVIENNQYAMGTSVQRSTKSPSLWKRGEAYGIKGEEVDGMDVL 231 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVR 315 AV+ ++AVA+CRA KGP I+E+ TYRYRGHSMSDPA YR+R+E+ +M+ DPIEQVR Sbjct: 232 AVRDAGERAVAHCRAGKGPYILEVKTYRYRGHSMSDPAKYRSRDEVQKMKDERDPIEQVR 291 Query: 316 KRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + LL A+E +LK+I+ +++ I+N S EFA+ EP EL++DI Sbjct: 292 QILLTGNHATEDELKKIDADIKAIVNESAEFAKDSPEPALDELWTDI 338 >gi|332186153|ref|ZP_08387899.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sphingomonas sp. S17] gi|332013968|gb|EGI56027.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sphingomonas sp. S17] Length = 309 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/307 (63%), Positives = 244/307 (79%), Gaps = 2/307 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGHILA 117 MLLIRRFEEKAGQLYG+G++GGFCHL IGQEAV VG++ +L + D +IT YR+HGH+LA Sbjct: 1 MLLIRRFEEKAGQLYGLGLIGGFCHLYIGQEAVAVGLQSALDGDKDSVITGYRDHGHMLA 60 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 G+D IMAELTGR GISKGKGGSMHMFST++ FYGGHGIVGAQVSLGTG+AF +KY Sbjct: 61 YGIDPKVIMAELTGRAAGISKGKGGSMHMFSTEHKFYGGHGIVGAQVSLGTGLAFGHKYS 120 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 +C+ FGDGAANQGQVYESFN+A LW L +I+VIENNQYAMGTSV+RAS++ + Sbjct: 121 NDGGVCLAYFGDGAANQGQVYESFNMAELWKLPIIFVIENNQYAMGTSVNRASSEDQLYR 180 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 RG SF IPG+QVDGMD+ A + ++A+A+ RA KGP+I+EM TYRYRGHSMSDPA YR+ Sbjct: 181 RGESFRIPGIQVDGMDVLACRGAAEEALAWVRAGKGPVILEMKTYRYRGHSMSDPAKYRS 240 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 REE+ +R DPI+ V K+LL + +E DLK +E +RK +N + +FA+ EPD AE Sbjct: 241 REEVQGVRDKSDPIDHV-KKLLEAQGVTEADLKVLEQEIRKQVNEAADFAEQTPEPDVAE 299 Query: 358 LYSDILI 364 LY+++L+ Sbjct: 300 LYTEVLV 306 >gi|149184585|ref|ZP_01862903.1| pyruvate dehydrogenase E1 component alpha subunit [Erythrobacter sp. SD-21] gi|148831905|gb|EDL50338.1| pyruvate dehydrogenase E1 component alpha subunit [Erythrobacter sp. SD-21] Length = 356 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 195/354 (55%), Positives = 263/354 (74%), Gaps = 5/354 (1%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVS---EFNKEQELSAYRLMLLIRRFEEKAGQ 71 MA P+ +A + + D E E + +Q Y MLLIRRFEE+AGQ Sbjct: 1 MAKAPTKTAPHSPAENPDFALHSLQEELEAKKRYDATDDQLRDFYEQMLLIRRFEERAGQ 60 Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELT 130 LYG+G++GGFCHL IGQEAV VG++ +LTE D +IT YR+HGH+LA G+D IMAELT Sbjct: 61 LYGLGLIGGFCHLYIGQEAVAVGLQSALTEQLDSVITGYRDHGHMLAYGIDPKVIMAELT 120 Query: 131 GRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDG 190 GR+ GISKGKGGSMHMFST++ FYGGHGIVGAQV+LG G+A A++Y +C+ FGDG Sbjct: 121 GREAGISKGKGGSMHMFSTEHKFYGGHGIVGAQVALGGGLALAHQYNEDGGLCLAYFGDG 180 Query: 191 AANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD 250 AANQGQVYE+FN+A+LW L +++VIENNQYAMGT+VSR+SA+T F +RG +F IPGM+V+ Sbjct: 181 AANQGQVYETFNMASLWKLPIVFVIENNQYAMGTAVSRSSAETEFYRRGTAFRIPGMKVN 240 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDP 310 GMD+ V+ + A + R +GP+++E TYRYRGHSMSDPA YRTREE+ +++ + DP Sbjct: 241 GMDVLEVRQAAEIAFKHVREGRGPVLMECETYRYRGHSMSDPAKYRTREEVQDVKEHKDP 300 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 IE V+K L+ + SE DLK I+ +RK+++ + +FA++ EPDP+ELY+D+L+ Sbjct: 301 IEAVKKILI-EQGNSEDDLKAIDKGIRKVVSEAADFAENSPEPDPSELYTDVLV 353 >gi|162147723|ref|YP_001602184.1| pyruvate dehydrogenase E1 component subunit alpha [Gluconacetobacter diazotrophicus PAl 5] gi|161786300|emb|CAP55882.1| Pyruvate dehydrogenase E1 component subunit alpha [Gluconacetobacter diazotrophicus PAl 5] Length = 363 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 189/318 (59%), Positives = 249/318 (78%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE A+ M+LIRRFEE+AGQLYGMG++GGFCHL IGQEAV+VG++M L +GD++I Sbjct: 45 MSKEDLTRAFHDMVLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVVVGVQMELKQGDKII 104 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HG +LA G+D +MAELTGR+GG S+GKGGSMHMFS++ FYGGHGIVGAQVSL Sbjct: 105 TSYRDHGQMLAAGMDPRGVMAELTGREGGYSRGKGGSMHMFSSEKHFYGGHGIVGAQVSL 164 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AFANKYR +D++ + FG+GA++QGQVYESFN+AAL L ++V+ENN Y MGTSV Sbjct: 165 GIGLAFANKYRGTDEVSIAYFGEGASSQGQVYESFNLAALHKLPCVFVLENNHYGMGTSV 224 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+SA + G + IPG QVDGMD+ AV+ +A+ +CR KGP ++EM TYRYRG Sbjct: 225 ERSSASKELWRNGEPWGIPGRQVDGMDVEAVRDAAREAIEHCRQGKGPYLLEMTTYRYRG 284 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR R E++EMR NHDPI++VRK LL E +LK IE V++++ ++ +F Sbjct: 285 HSMSDPAKYRPRSEVDEMRKNHDPIDRVRKELLAMG-VGEAELKTIEDKVKEVVVDAADF 343 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ EPDPAEL++D+L+ Sbjct: 344 AQTSPEPDPAELWTDVLV 361 >gi|329113475|ref|ZP_08242256.1| Pyruvate dehydrogenase E1 component subunit alpha [Acetobacter pomorum DM001] gi|326697300|gb|EGE48960.1| Pyruvate dehydrogenase E1 component subunit alpha [Acetobacter pomorum DM001] Length = 336 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 198/318 (62%), Positives = 248/318 (77%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++Q L AY MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++MSL EGD++I Sbjct: 18 LTRDQFLKAYYDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGIQMSLHEGDKLI 77 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HG +L G+ +MAELTGR G S GKGGSMHMFS + FYGGHGIVGAQVSL Sbjct: 78 TSYRDHGQMLVAGMTPRGVMAELTGRSTGYSHGKGGSMHMFSREKNFYGGHGIVGAQVSL 137 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AFANKYR +D++ V FGDGAANQGQVYESFN+AAL L I+VIENN+Y MGT+V Sbjct: 138 GIGLAFANKYRNTDEVSVAYFGDGAANQGQVYESFNLAALLKLPCIFVIENNRYGMGTAV 197 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA K G + IPG +VDGMD+ AV A ++AV +CR KGP ++EM+TYRYRG Sbjct: 198 ERASASHELYKNGEPWGIPGKRVDGMDVAAVYAAAEEAVKHCREGKGPYLLEMMTYRYRG 257 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTR+E++E+R DPIE V K +L + +E +LK +E ++ I+N+S EF Sbjct: 258 HSMSDPAKYRTRDEVDEVRKTRDPIEHV-KHILLDSGVTEAELKTMETEIKSIVNDSAEF 316 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ EPDPAELY+D+++ Sbjct: 317 AQTSPEPDPAELYTDVVL 334 >gi|296116184|ref|ZP_06834802.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Gluconacetobacter hansenii ATCC 23769] gi|295977290|gb|EFG84050.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Gluconacetobacter hansenii ATCC 23769] Length = 336 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 190/310 (61%), Positives = 243/310 (78%), Gaps = 1/310 (0%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 AY M+LIRRFEE+AGQLYGMG++GGFCHL IGQEAV+VG+ M L +GD++IT+YR+HG Sbjct: 26 AYYQMVLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVVVGIHMELKDGDKIITSYRDHGQ 85 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +LA G+ +MAELTGR+GG S GKGGSMHMFS + FYGGHGIVGAQVSLG G+AFAN Sbjct: 86 MLAAGMTPRGVMAELTGREGGYSHGKGGSMHMFSREKNFYGGHGIVGAQVSLGIGLAFAN 145 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KYR +D++ V +G+GA+NQGQVYESFN+AAL L ++V+ENN Y MGTSV RASA Sbjct: 146 KYRGTDEVSVTYYGEGASNQGQVYESFNLAALHKLPCVFVLENNHYGMGTSVERASASRE 205 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + G + IPG VDGMD+ AV+ AVA+CRA KGP+++E+ TYRYRGHSMSDPA Sbjct: 206 LWRNGEPWGIPGFHVDGMDVEAVRNAARDAVAHCRAGKGPVLLEVDTYRYRGHSMSDPAK 265 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR R E++EMR NHDPI++VRK LL N +E LK I+ V+ I+ ++ +FAQ+ EPD Sbjct: 266 YRQRSEVDEMRKNHDPIDRVRKELL-NMGTTEDALKAIDAKVKAIVVDASDFAQTSPEPD 324 Query: 355 PAELYSDILI 364 P+EL++D+L+ Sbjct: 325 PSELWTDVLV 334 >gi|296535285|ref|ZP_06897491.1| pyruvate dehydrogenase complex E1 component alpha subunit [Roseomonas cervicalis ATCC 49957] gi|296264379|gb|EFH10798.1| pyruvate dehydrogenase complex E1 component alpha subunit [Roseomonas cervicalis ATCC 49957] Length = 345 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 203/318 (63%), Positives = 252/318 (79%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++EQ L AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+M L GDQ+I Sbjct: 26 LSQEQMLQAYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQMCLMPGDQVI 85 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HGH+LA G++A +MAELTGR GG SKGKGGSMHMFS + GF+GGHGIVGAQVSL Sbjct: 86 TSYRDHGHMLATGMEARGVMAELTGRAGGYSKGKGGSMHMFSREKGFFGGHGIVGAQVSL 145 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AFAN Y + +C+ +GDGAANQGQV+ES+N+AAL+ L V+++IENN+Y MGTS Sbjct: 146 GAGLAFANMYNDNGNVCLTYYGDGAANQGQVFESYNLAALFKLPVVFIIENNKYGMGTSA 205 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA + SK G + IPG QVDGMD+ AVKA ++AVA+CR KGP I+EM TYRYRG Sbjct: 206 DRASASKDRSKDGTPWGIPGEQVDGMDVEAVKAAGERAVAHCREGKGPYILEMKTYRYRG 265 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTREE+ +MR HD IE RKRLL E LK ++ V++I+ +S EF Sbjct: 266 HSMSDPAKYRTREEVQKMREQHDCIETARKRLLEGGL-PEDALKTVDDEVKRIVADSAEF 324 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ EPD +EL++D+L+ Sbjct: 325 AQTSPEPDESELWTDVLL 342 >gi|294011435|ref|YP_003544895.1| pyruvate dehydrogenase E1 component alpha subunit [Sphingobium japonicum UT26S] gi|292674765|dbj|BAI96283.1| pyruvate dehydrogenase E1 component alpha subunit [Sphingobium japonicum UT26S] Length = 358 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 191/318 (60%), Positives = 251/318 (78%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMI 106 +KE+ L YR M+LIRRFEEKAGQLYG+G++GGFCHL IGQEAV VG++ +L G D +I Sbjct: 39 SKEELLEFYRQMVLIRRFEEKAGQLYGLGLIGGFCHLYIGQEAVAVGIQSALQPGKDSVI 98 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HGH+LA G+D + IMAELTGR+ GIS+GKGGSMHMFS ++ FYGGHGIVGAQVSL Sbjct: 99 TGYRDHGHMLAYGIDPNVIMAELTGREAGISRGKGGSMHMFSVEHKFYGGHGIVGAQVSL 158 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+ FA+KY +CV FGDGAANQGQVYESFN+A LW L +I+VIENNQYAMGTSV Sbjct: 159 GAGLGFAHKYNNDGGVCVAYFGDGAANQGQVYESFNMAELWKLPIIFVIENNQYAMGTSV 218 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +R+SA+ +RG SF IPG+QV+GMD+ AV+ ++A+ + +A GPI++EM TYRYRG Sbjct: 219 NRSSAEDQLYRRGESFRIPGIQVNGMDVLAVRGATEEALKWVQAGNGPILLEMKTYRYRG 278 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR+REE+ MR DPIE V K+ L E +LK+I+ ++RK+++++ +F Sbjct: 279 HSMSDPAKYRSREEVQSMREKSDPIEGV-KKYLAEMGVGEDELKKIDQDIRKVVSDAADF 337 Query: 347 AQSDKEPDPAELYSDILI 364 A++ EP+ +LY+D+L+ Sbjct: 338 AETSPEPELHDLYTDVLV 355 >gi|94498560|ref|ZP_01305115.1| Pyruvate dehydrogenase (lipoamide) [Sphingomonas sp. SKA58] gi|94422003|gb|EAT07049.1| Pyruvate dehydrogenase (lipoamide) [Sphingomonas sp. SKA58] Length = 357 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 191/320 (59%), Positives = 249/320 (77%), Gaps = 2/320 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQ 104 E +K++ L Y+ M+LIRRFEEKAGQLYG+G++GGFCHL IGQEAV VG++ +L G D Sbjct: 36 EASKDELLDFYKQMVLIRRFEEKAGQLYGLGLIGGFCHLYIGQEAVAVGIQSALKPGKDS 95 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT YR+HGH+LA G+D IMAELTGR+ GIS+GKGGSMHMFS ++ FYGGHGIVGAQV Sbjct: 96 VITGYRDHGHMLAYGIDPKIIMAELTGREAGISRGKGGSMHMFSVEHKFYGGHGIVGAQV 155 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 SLG G+ FA+KY +CV FGDGAANQGQVYE+FN+A LW L +I+VIENNQYAMGT Sbjct: 156 SLGAGLGFAHKYNDDGGVCVAYFGDGAANQGQVYEAFNMAELWKLPIIFVIENNQYAMGT 215 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV+RAS++ +RG SF IPG+QV+GMD+ AV+ ++A+ + + GPI++EM TYRY Sbjct: 216 SVNRASSEDQLYRRGESFRIPGIQVNGMDVLAVRGATEEALKWVQGGNGPILLEMKTYRY 275 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR+REE+ MR DPIE V+K L+ E ++K I+ N+RK ++ + Sbjct: 276 RGHSMSDPAKYRSREEVQSMRDTSDPIEGVKKYLI-EAGVGEDEIKSIDQNIRKTVSEAA 334 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FA++ EPD AELY+D+L+ Sbjct: 335 DFAETSPEPDMAELYTDVLV 354 >gi|86138769|ref|ZP_01057341.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter sp. MED193] gi|85824416|gb|EAQ44619.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter sp. MED193] Length = 329 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 199/313 (63%), Positives = 254/313 (81%), Gaps = 1/313 (0%) Query: 51 QELSA-YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 +EL+ YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT+Y Sbjct: 15 EELTKFYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDKRITSY 74 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+HGH+LACG+DA +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQV LG G Sbjct: 75 RDHGHMLACGMDADGVMAELTGREGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVPLGAG 134 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +AF++KY+ + ++ FGDGAANQGQVYE+FN+AA+W+L VI+VIENNQYAMGT+ +R+ Sbjct: 135 LAFSDKYKGNGRVTFTYFGDGAANQGQVYETFNMAAIWDLPVIFVIENNQYAMGTAQARS 194 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 ++ + RG +F IPG VDGMD+ AVKA ++A A+CRA KGP I+E+ TYRYRGHSM Sbjct: 195 TSTPDIYTRGEAFGIPGEAVDGMDVLAVKAASERATAHCRAGKGPYILEVKTYRYRGHSM 254 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA YRTREE+ +MRS DPIEQVR LL K A+E DLK I+ +++++N S EFA++ Sbjct: 255 SDPAKYRTREEVQKMRSERDPIEQVRDMLLTGKHATEDDLKAIDKEIKEVVNQSAEFART 314 Query: 350 DKEPDPAELYSDI 362 EP EL++DI Sbjct: 315 SPEPALEELWTDI 327 >gi|307292635|ref|ZP_07572481.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sphingobium chlorophenolicum L-1] gi|306880701|gb|EFN11917.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sphingobium chlorophenolicum L-1] Length = 351 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 190/310 (61%), Positives = 247/310 (79%), Gaps = 2/310 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 YR M+LIRRFEEKAGQLYG+G++GGFCHL IGQEAV VG++ +L G D +IT YR+HGH Sbjct: 40 YRQMVLIRRFEEKAGQLYGLGLIGGFCHLYIGQEAVAVGIQSALEPGKDSVITGYRDHGH 99 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +LA G+D + IMAELTGR+ GIS+GKGGSMHMFS ++ FYGGHGIVGAQVSLG G+ FA+ Sbjct: 100 MLAYGIDPNVIMAELTGREAGISRGKGGSMHMFSVEHKFYGGHGIVGAQVSLGAGLGFAH 159 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY +CV FGDGAANQGQVYESFN+A LW L +I+VIENNQYAMGTSV+R+SA+ Sbjct: 160 KYNNDGGVCVAYFGDGAANQGQVYESFNMAELWKLPIIFVIENNQYAMGTSVNRSSAEDQ 219 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 +RG SF IPG+QV+GMD+ AV+ ++A+ + +A GPI++EM TYRYRGHSMSDPA Sbjct: 220 LYRRGESFRIPGIQVNGMDVLAVRGATEEALKWVKAGNGPILLEMKTYRYRGHSMSDPAK 279 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR+REE+ MR DPIE V K+ L SE +LK+I+ ++RKI++++ +FA++ EP+ Sbjct: 280 YRSREEVQSMRDKSDPIEGV-KQYLAQAGVSEDELKKIDQDIRKIVSDAADFAETSPEPE 338 Query: 355 PAELYSDILI 364 +LY+D+L+ Sbjct: 339 LRDLYTDVLV 348 >gi|258542312|ref|YP_003187745.1| pyruvate dehydrogenase E1 component subunit alpha [Acetobacter pasteurianus IFO 3283-01] gi|256633390|dbj|BAH99365.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-01] gi|256636449|dbj|BAI02418.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-03] gi|256639502|dbj|BAI05464.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-07] gi|256642558|dbj|BAI08513.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-22] gi|256645613|dbj|BAI11561.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-26] gi|256648666|dbj|BAI14607.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-32] gi|256651719|dbj|BAI17653.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654710|dbj|BAI20637.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-12] Length = 336 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 197/318 (61%), Positives = 248/318 (77%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++Q L AY MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++MSL +GD++I Sbjct: 18 LTRDQFLKAYYDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGIQMSLKDGDKLI 77 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HG +L G+ +MAELTGR G S GKGGSMHMFS + FYGGHGIVGAQVSL Sbjct: 78 TSYRDHGQMLVAGMTPRGVMAELTGRSTGYSHGKGGSMHMFSREKNFYGGHGIVGAQVSL 137 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AFANKYR +D++ V FGDGAANQGQVYESFN+AAL L I+VIENN+Y MGT+V Sbjct: 138 GIGLAFANKYRDTDEVSVAYFGDGAANQGQVYESFNLAALLKLPCIFVIENNRYGMGTAV 197 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA K G + IPG +VDGMD+ AV A ++AV +CR KGP ++EM+TYRYRG Sbjct: 198 ERASASHELYKNGEPWGIPGKRVDGMDVAAVYAAAEEAVKHCREGKGPYLLEMMTYRYRG 257 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTR+E++E+R DPIE V K +L + +E +LK +E ++ I+N+S EF Sbjct: 258 HSMSDPAKYRTRDEVDEVRKTRDPIEHV-KHILLDSGVTEAELKTMETEIKGIVNDSAEF 316 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ EPDPAELY+D+++ Sbjct: 317 AQTSPEPDPAELYTDVVL 334 >gi|103486018|ref|YP_615579.1| pyruvate dehydrogenase (lipoamide) [Sphingopyxis alaskensis RB2256] gi|98976095|gb|ABF52246.1| Pyruvate dehydrogenase (lipoamide) [Sphingopyxis alaskensis RB2256] Length = 356 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 195/316 (61%), Positives = 245/316 (77%), Gaps = 3/316 (0%) Query: 51 QELSA-YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITA 108 QEL YR MLLIRRFEEKAGQLYG+G++GGFCHL IGQEAV VG++ +L + D +IT Sbjct: 39 QELEKFYRDMLLIRRFEEKAGQLYGLGLIGGFCHLYIGQEAVAVGLQSALDGDKDSVITG 98 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HGH+LA G+D IMAELTGR GISKGKGGSMHMFS ++ FYGGHGIVGAQVSLGT Sbjct: 99 YRDHGHMLAYGIDPKVIMAELTGRAAGISKGKGGSMHMFSVEHKFYGGHGIVGAQVSLGT 158 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+AFA+KYR + + FGDGAANQGQVYESFN+A LW L +I+VIENNQYAMGTSV+R Sbjct: 159 GLAFAHKYRGDGGVAMAYFGDGAANQGQVYESFNMAELWKLPIIFVIENNQYAMGTSVNR 218 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASA+ +RG SF IPGMQVDGMD+ AV+ + A+ + RA +GP+++E+ TYRYRGHS Sbjct: 219 ASAEDQLYRRGESFRIPGMQVDGMDVLAVRGAAEAALEWVRAGRGPVLMELKTYRYRGHS 278 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YR+REE+ +R D IE + K+L+ E +K+I+ +R I+ S +FA+ Sbjct: 279 MSDPAKYRSREEVQAVRDKSDAIEHL-KKLMEGAGIGEDRIKDIDKEIRAIVAESADFAE 337 Query: 349 SDKEPDPAELYSDILI 364 S EPD +ELY+D+L+ Sbjct: 338 SAPEPDLSELYTDVLV 353 >gi|42520291|ref|NP_966206.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Wolbachia endosymbiont of Drosophila melanogaster] gi|99034777|ref|ZP_01314700.1| hypothetical protein Wendoof_01000476 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] gi|225677281|ref|ZP_03788263.1| pyruvate dehydrogenase complex, E1 component [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|42410029|gb|AAS14140.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Wolbachia endosymbiont of Drosophila melanogaster] gi|225590673|gb|EEH11918.1| pyruvate dehydrogenase complex, E1 component [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 326 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 189/316 (59%), Positives = 238/316 (75%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F KEQ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV VG + + GD I Sbjct: 6 FTKEQIIGFYRKMLLIRRFEEKAGQLYGMGLIGGFCHLSIGQEAVAVGTQAASKLGDAFI 65 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HG +LAC D + +MAELTG++ G SKGKGGSMH+F + F+GGHGIVGAQV + Sbjct: 66 TSYRDHGLMLACDSDPNVVMAELTGKETGCSKGKGGSMHVFDVEKKFFGGHGIVGAQVPI 125 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTGIAFANKY++ D + FGDGAANQGQVYESFN+A+LW L V+Y+IENN+YAMGTSV Sbjct: 126 GTGIAFANKYKKKDNVVFTYFGDGAANQGQVYESFNMASLWELPVVYIIENNEYAMGTSV 185 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R++ T KRG SF IPG QVDGMD +V +A + R+ KGPI++EM TYRYRG Sbjct: 186 QRSTLVTELYKRGESFGIPGKQVDGMDFFSVYEATSEAAEHTRSGKGPILLEMKTYRYRG 245 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR +EE+ +M+ NHDPI ++K + NK ASE + K I+ +R ++ S +F Sbjct: 246 HSMSDPATYRLKEEVEDMKQNHDPISTLKKYMTDNKMASEEECKVIDKEIRDLVKKSEDF 305 Query: 347 AQSDKEPDPAELYSDI 362 A++ KEP ELY+D+ Sbjct: 306 AKNSKEPSVDELYTDV 321 >gi|225630143|ref|YP_002726934.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Wolbachia sp. wRi] gi|225592124|gb|ACN95143.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Wolbachia sp. wRi] Length = 326 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 189/316 (59%), Positives = 238/316 (75%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F KEQ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV VG + + GD I Sbjct: 6 FTKEQIIGFYRKMLLIRRFEEKAGQLYGMGLIGGFCHLSIGQEAVAVGTQAASKLGDAFI 65 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HG +LAC D + +MAELTG++ G SKGKGGSMH+F + F+GGHGIVGAQV + Sbjct: 66 TSYRDHGLMLACDSDPNVVMAELTGKETGCSKGKGGSMHVFDVEKKFFGGHGIVGAQVPI 125 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTGIAFANKY++ D + FGDGAANQGQVYESFN+A+LW L V+Y+IENN+YAMGTSV Sbjct: 126 GTGIAFANKYKKKDNVVFTYFGDGAANQGQVYESFNMASLWELPVVYIIENNEYAMGTSV 185 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R++ T KRG SF IPG QVDGMD +V +A + R+ KGPI++EM TYRYRG Sbjct: 186 QRSTLVTELYKRGESFGIPGKQVDGMDFFSVYEATSEAAEHTRSGKGPILLEMKTYRYRG 245 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR +EE+ +M+ NHDPI ++K + NK ASE + K I+ +R ++ S +F Sbjct: 246 HSMSDPATYRLKEEVEDMKQNHDPISTLKKYMTDNKMASEEECKIIDKEIRDLVKKSEDF 305 Query: 347 AQSDKEPDPAELYSDI 362 A++ KEP ELY+D+ Sbjct: 306 AKNSKEPSVDELYTDV 321 >gi|110680207|ref|YP_683214.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter denitrificans OCh 114] gi|109456323|gb|ABG32528.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter denitrificans OCh 114] Length = 336 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 201/313 (64%), Positives = 249/313 (79%), Gaps = 1/313 (0%) Query: 51 QELSAY-RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 +EL+AY + MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT+Y Sbjct: 15 EELTAYYKDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDKRITSY 74 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+HGH+LACG+D + +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIV AQV LG G Sbjct: 75 RDHGHMLACGMDPNGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVAAQVPLGAG 134 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +AFA+KY + ++ FGDGAANQGQVYE+FN+AALW+L I+VIENNQYAMGTS R+ Sbjct: 135 LAFADKYLDNKRVTFTYFGDGAANQGQVYEAFNMAALWDLPCIFVIENNQYAMGTSQQRS 194 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 ++ +RG +F IPG VDGMD+ AVKA D AVA+CR+ KGP I+E+ TYRYRGHSM Sbjct: 195 TSSDEIYERGRAFGIPGEAVDGMDVIAVKAAGDTAVAHCRSGKGPYILEIKTYRYRGHSM 254 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA YRTREE+ +MR DPIEQVR LL K A+E DLK I+ ++ I+N S EFA++ Sbjct: 255 SDPAKYRTREEVQKMRDERDPIEQVRSMLLTGKHATEDDLKAIDKEIKAIVNESAEFAKT 314 Query: 350 DKEPDPAELYSDI 362 EPD EL++DI Sbjct: 315 SPEPDLKELWTDI 327 >gi|197105207|ref|YP_002130584.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Phenylobacterium zucineum HLK1] gi|196478627|gb|ACG78155.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Phenylobacterium zucineum HLK1] Length = 348 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 204/318 (64%), Positives = 251/318 (78%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S +K++ L YR MLLIRRFEE+AGQLYGMG++GGFCHL IGQEA+ VG++ GDQ Sbjct: 21 SAADKDELLKFYRDMLLIRRFEERAGQLYGMGLIGGFCHLYIGQEAIAVGVQAIKQPGDQ 80 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT YR+HGH+LACG+D ++MAELTGR GG SKGKGGSMHMFST+ FYGGHGIVGAQV Sbjct: 81 VITGYRDHGHMLACGMDPREVMAELTGRAGGSSKGKGGSMHMFSTEADFYGGHGIVGAQV 140 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 SLGTG+A ANKYR + K+ FGDGAANQGQVYESFN+A LW+L V+YVIENNQYAMGT Sbjct: 141 SLGTGLALANKYRDNGKVSFTYFGDGAANQGQVYESFNMAELWSLPVVYVIENNQYAMGT 200 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +V R+S++T +RG SF IPG QVDGMD+ AVKA KA + R+ GP I+EM TYRY Sbjct: 201 AVERSSSETELFRRGASFKIPGEQVDGMDVLAVKAAAAKAAEHARSGNGPYILEMKTYRY 260 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE++E+R DPI+ V + L + WA E LK I+ V+KI+ ++ Sbjct: 261 RGHSMSDPAKYRTREEVDEVRKTRDPIDHVEELLEKHGWADEASLKAIDAEVKKIVADAA 320 Query: 345 EFAQSDKEPDPAELYSDI 362 EFA++ EPDP+ELY+D+ Sbjct: 321 EFARTSPEPDPSELYTDV 338 >gi|163731359|ref|ZP_02138806.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter litoralis Och 149] gi|161394813|gb|EDQ19135.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter litoralis Och 149] Length = 336 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 200/313 (63%), Positives = 249/313 (79%), Gaps = 1/313 (0%) Query: 51 QELSAY-RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 +EL+AY + MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT+Y Sbjct: 15 EELTAYYKDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDKRITSY 74 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+HGH+LACG+D + +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIV AQV LG G Sbjct: 75 RDHGHMLACGMDPNGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVAAQVPLGAG 134 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +AFA+KY + ++ FGDGAANQGQVYE+FN+AALW+L ++VIENNQYAMGTS R+ Sbjct: 135 LAFADKYLDNKRVTFTYFGDGAANQGQVYEAFNMAALWDLPCVFVIENNQYAMGTSQQRS 194 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 ++ +RG +F IPG VDGMD+ AVKA D AVA+CR+ KGP I+E+ TYRYRGHSM Sbjct: 195 TSSDEIYERGRAFGIPGEAVDGMDVIAVKAAGDTAVAHCRSGKGPYILEIKTYRYRGHSM 254 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA YRTREE+ +MR DPIEQVR LL K A+E DLK I+ ++ I+N S EFA++ Sbjct: 255 SDPAKYRTREEVQKMRDERDPIEQVRSMLLTGKHATEEDLKAIDKEIKAIVNESAEFAKT 314 Query: 350 DKEPDPAELYSDI 362 EPD EL++DI Sbjct: 315 SPEPDLEELWTDI 327 >gi|84687413|ref|ZP_01015291.1| Pyruvate dehydrogenase E1 component, alpha subunit [Maritimibacter alkaliphilus HTCC2654] gi|84664571|gb|EAQ11057.1| Pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacterales bacterium HTCC2654] Length = 329 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 197/318 (61%), Positives = 252/318 (79%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S +KE+ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ Sbjct: 10 SNTSKEELLEHYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDK 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +T+YR+HGH+LACG+D +MAELTGR+GG SKGKGGSMHMFST+ FYGGHGIVGAQV Sbjct: 70 RVTSYRDHGHMLACGMDPKGVMAELTGREGGYSKGKGGSMHMFSTEKHFYGGHGIVGAQV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +G G+AFA+KY +D++ FGDGAANQGQV E++N+A LW+L VI+VIENNQYAMGT Sbjct: 130 PIGAGLAFADKYLGNDRVTFTYFGDGAANQGQVAETYNMAELWDLPVIFVIENNQYAMGT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S+ RA+ + +RG ++ I G +VDGMD+ AVKA +KA+A+CRA KGP I+EM TYRY Sbjct: 190 SMKRATKSPSLWERGAAYGIEGEEVDGMDVLAVKAAGEKAIAHCRAGKGPYILEMKTYRY 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE+ +MR DPIE VR L+ K ASE DLK ++ +++I+N++ Sbjct: 250 RGHSMSDPAKYRTREEVQKMRDEKDPIEHVRDLLIQGKHASEDDLKAVDKEIKQIVNDAA 309 Query: 345 EFAQSDKEPDPAELYSDI 362 +FA+ EP EL++DI Sbjct: 310 DFARESPEPALDELWTDI 327 >gi|326387729|ref|ZP_08209335.1| pyruvate dehydrogenase (lipoamide) [Novosphingobium nitrogenifigens DSM 19370] gi|326207775|gb|EGD58586.1| pyruvate dehydrogenase (lipoamide) [Novosphingobium nitrogenifigens DSM 19370] Length = 379 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 185/320 (57%), Positives = 247/320 (77%), Gaps = 2/320 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQ 104 E + E+ L Y M+LIRRFEE+AGQLYG+G++GGFCHL IGQEAV VG++ +L G D Sbjct: 58 EASDEELLHFYEQMVLIRRFEERAGQLYGLGLIGGFCHLYIGQEAVAVGVQSALQSGHDS 117 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT YR+HGH+LA G+D IMAELTGR GIS+GKGGSMHMFST++ FYGGHGIVGAQV Sbjct: 118 VITGYRDHGHMLAYGIDPRIIMAELTGRGAGISRGKGGSMHMFSTEHKFYGGHGIVGAQV 177 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AFA+KYR +C+ FGDGA+NQGQVYE+FN+AALW L +++V+ENN YAMGT Sbjct: 178 PLGAGLAFAHKYRNDGGVCIAYFGDGASNQGQVYETFNMAALWKLPIVFVVENNGYAMGT 237 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +V R SA+T+F +RG +F IPGM V+GMD+ V+ + A+ + RA GP+++E+ TYRY Sbjct: 238 AVKRGSAETHFYRRGTAFRIPGMDVNGMDVLEVRQATEVALEFVRAGNGPVLMELNTYRY 297 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR+REE+ EMR HDPIE ++ LL + E +K+I+ +R+++ + Sbjct: 298 RGHSMSDPAKYRSREEVQEMRDKHDPIEAAKQELL-KRGIDEVRIKDIDKKIRQVVAEAA 356 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FA++ EPD ELY+D+L+ Sbjct: 357 DFAENSPEPDMPELYTDVLV 376 >gi|197103266|ref|YP_002128644.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, alpha subunit [Phenylobacterium zucineum HLK1] gi|196480542|gb|ACG80069.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, alpha subunit [Phenylobacterium zucineum HLK1] Length = 352 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 187/306 (61%), Positives = 240/306 (78%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M LIRRFEE+AGQLYGMG++GGFCHL IGQEAV VG+ EGDQ+IT+YR+HG+ LAC Sbjct: 43 MSLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVAVGVVGVRAEGDQVITSYRDHGYALAC 102 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+D + +MAELTGR GG S+GKGGSMH+F+ + GFYGGHGIVGAQVSLG+G+AFAN+YR Sbjct: 103 GMDPAAMMAELTGRIGGASRGKGGSMHIFAPEKGFYGGHGIVGAQVSLGSGLAFANRYRN 162 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 DK+ V FG+GAANQGQVYESFN+AALW L +Y+IENN+YAMGT+ R++++T F +R Sbjct: 163 QDKVAFVVFGEGAANQGQVYESFNMAALWKLPAVYIIENNRYAMGTAAERSASETRFYRR 222 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 G+SF IPG +VDGMD+ AV+ +A A+ RA KGP ++EM TYRYRGHSMSDPA YR+R Sbjct: 223 GLSFGIPGEEVDGMDVEAVREATSRAAAHARAGKGPYLLEMKTYRYRGHSMSDPAKYRSR 282 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 EE++E+R DPIE+ R+R+L A L +I+ V+ + +VEFAQ+ EP EL Sbjct: 283 EEVDEVRRAKDPIERARQRILDLDPAQAHSLAQIDARVKAEVERAVEFAQTAPEPPAREL 342 Query: 359 YSDILI 364 SD+ + Sbjct: 343 LSDVYV 348 >gi|190570556|ref|YP_001974914.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019198|ref|ZP_03335005.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190356828|emb|CAQ54195.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995307|gb|EEB55948.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 326 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 186/316 (58%), Positives = 237/316 (75%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F KEQ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV VG + + GD I Sbjct: 6 FTKEQVIGFYRKMLLIRRFEEKAGQLYGMGLIGGFCHLSIGQEAVAVGTQAASKPGDAFI 65 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HG +LAC D + +MAEL G++ G SKGKGGSMH+F + F+GGHGIVGAQV + Sbjct: 66 TSYRDHGLMLACNSDPNVVMAELNGKETGCSKGKGGSMHIFDVEKNFFGGHGIVGAQVPI 125 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTGIAFANKY++ D + FGDGAANQGQVYESFN+A+LW L V+Y+IENN+YAMGTSV Sbjct: 126 GTGIAFANKYKKKDNVVFTYFGDGAANQGQVYESFNMASLWKLPVVYIIENNEYAMGTSV 185 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R++ T KRG SF IPG QVDGMD +V + + R KGP+++EM TYRYRG Sbjct: 186 QRSTLVTELYKRGESFGIPGKQVDGMDFFSVYEVTSEIAEHVRGGKGPLLLEMKTYRYRG 245 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRT+EE+ +M+ NHDPI +++ + NK AS+ + K I+ +R ++ S +F Sbjct: 246 HSMSDPATYRTKEEVEDMKQNHDPISNLKQYMKDNKIASDEECKAIDKEIRDLVKKSEDF 305 Query: 347 AQSDKEPDPAELYSDI 362 A+S KEP+ ELY+D+ Sbjct: 306 AKSSKEPEIDELYTDV 321 >gi|302383094|ref|YP_003818917.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Brevundimonas subvibrioides ATCC 15264] gi|302193722|gb|ADL01294.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brevundimonas subvibrioides ATCC 15264] Length = 349 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 202/343 (58%), Positives = 256/343 (74%), Gaps = 7/343 (2%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 A + T S IP V KE+ L+ YR M+LIRRFEE+AGQLYGMG++GGFC Sbjct: 4 AAQKTTESKASAKIP-----NVPTATKEELLAFYREMVLIRRFEERAGQLYGMGLIGGFC 58 Query: 83 HLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKG 141 HL IGQEAV VG++ S+ +G D++IT YR+HGH+LA G+D ++MAELTGR GG SKGKG Sbjct: 59 HLYIGQEAVAVGVQASVKQGHDKIITGYRDHGHMLAAGMDPKEVMAELTGRSGGSSKGKG 118 Query: 142 GSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF 201 GSMHMF GFYGGHGIVGAQV+LGTG+AFA KYR D + + FGDGAANQGQVYESF Sbjct: 119 GSMHMFDVPTGFYGGHGIVGAQVALGTGLAFAGKYRGDDSVAFIYFGDGAANQGQVYESF 178 Query: 202 NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 N+A LW L IY+IENNQYAMGTS+ R+S+ T+ + RG SF IPG VDGMD+ AVK + Sbjct: 179 NMAQLWKLPAIYIIENNQYAMGTSIERSSSTTDLAHRGASFGIPGELVDGMDVLAVKDAV 238 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHN 321 ++AV RA +GP I+E+ TYRYRGHSMSDPA YRT+EE++E++ DPI+ V K LL Sbjct: 239 ERAVKRARAGEGPFILEVKTYRYRGHSMSDPAKYRTKEEVDEVKKTRDPIDHV-KMLLDQ 297 Query: 322 KWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 A+E ++K I+ V+ I+ +V+FAQ EPDP+ELY+D+ + Sbjct: 298 AKATEDEIKAIDAEVKAIVAEAVQFAQESPEPDPSELYTDVYL 340 >gi|144898635|emb|CAM75499.1| Pyruvate dehydrogenase E1 component subunit alpha [Magnetospirillum gryphiswaldense MSR-1] Length = 333 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 188/320 (58%), Positives = 239/320 (74%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E +Q + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+ + + D Sbjct: 12 AEIGPDQLIGWYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQSAAGDTDS 71 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT+YR+HG +LACG+DA +MAELTGR GG S+GKGGSMHMFS + FYGGHGIVGAQV Sbjct: 72 VITSYRDHGQMLACGMDAKGVMAELTGRSGGYSRGKGGSMHMFSREKRFYGGHGIVGAQV 131 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +GTG+ FA+KY +C V GDGA NQGQVYESFN+AALW L V+YVIENN+YAMGT Sbjct: 132 PIGTGLGFAHKYTGDQGVCHVYLGDGALNQGQVYESFNMAALWKLPVVYVIENNKYAMGT 191 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S R +A KRG ++ IPG VDGM ++A+ +A+ + R+ GP I+EM TYRY Sbjct: 192 SSERHAAGIELFKRGAAYGIPGEAVDGMSVQAIYEAGSRALDHARSGNGPYILEMKTYRY 251 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRT+EE+ +MR HDPI+ ++ RLL E LKE++ V+ I+ + Sbjct: 252 RGHSMSDPAKYRTKEEVTKMREQHDPIDTLKARLLDAGLVDEAALKEMDREVKVIVTEAA 311 Query: 345 EFAQSDKEPDPAELYSDILI 364 EFAQ+ EPD +EL++D+LI Sbjct: 312 EFAQTSPEPDLSELWTDVLI 331 >gi|84503369|ref|ZP_01001438.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Oceanicola batsensis HTCC2597] gi|84388279|gb|EAQ01230.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Oceanicola batsensis HTCC2597] Length = 349 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 200/309 (64%), Positives = 244/309 (78%) Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 S YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT YR+HG Sbjct: 21 SYYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDKRITTYRDHG 80 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 H+LACG++ +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGA V LG G+AFA Sbjct: 81 HMLACGMNPDGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVGANVPLGAGLAFA 140 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 +KY +D++ FGDGAANQGQVYE+FN+AALW+L VI+VIENNQYAMGT+ R+++ Sbjct: 141 DKYLGNDRVTFTYFGDGAANQGQVYETFNMAALWHLPVIFVIENNQYAMGTAQKRSTSTP 200 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + RG +F IPG VDGMD+ AVKA DKAVA+CR+ KGP I+E+ TYRYRGHSMSDPA Sbjct: 201 DLYTRGEAFGIPGEVVDGMDVLAVKAAGDKAVAHCRSGKGPYILEIKTYRYRGHSMSDPA 260 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTREE+ +MR D IE+VR+ LL ASE DLK I+ +++I+N S EFA+ EP Sbjct: 261 KYRTREEVQKMREEKDAIERVRQMLLDEDHASEDDLKAIDKEIKEIVNQSAEFAKESPEP 320 Query: 354 DPAELYSDI 362 ELYSDI Sbjct: 321 AVEELYSDI 329 >gi|323136471|ref|ZP_08071553.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylocystis sp. ATCC 49242] gi|322398545|gb|EFY01065.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylocystis sp. ATCC 49242] Length = 333 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 197/320 (61%), Positives = 259/320 (80%), Gaps = 1/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +F +++EL+A+R MLLIRRFEEKAGQLYGMG++ GFCHL IGQEAV+VG+KM+ EGD Sbjct: 14 IPDFTRDEELAAFREMLLIRRFEEKAGQLYGMGVIAGFCHLYIGQEAVVVGVKMAAREGD 73 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q T+YR+HGH+LA G+D +MAEL G++GG SKGKGGSMHMFS + F+GGHGIVGA Sbjct: 74 QFTTSYRDHGHMLASGMDPKGVMAELAGKRGGYSKGKGGSMHMFSLEKNFFGGHGIVGAP 133 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +G GIAFAN YR D++ + FG+GAANQGQVYE+FN+AALW L V++++ENN+YAMG Sbjct: 134 APIGAGIAFANAYRGEDRVSLTFFGEGAANQGQVYETFNMAALWKLPVLFIVENNRYAMG 193 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TS++RASAQ +FS+RG +F IPG Q+DGMD+R V+A +A+ +CR GP ++E+ TYR Sbjct: 194 TSIARASAQKDFSRRGAAFAIPGKQIDGMDVRVVRAAAAEALDWCRKGNGPYLLEVQTYR 253 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR++EE+ +MR HDPIEQVR RLL + SE +LK+I+ VRKI+ + Sbjct: 254 YRGHSMSDPAKYRSKEEVQKMREEHDPIEQVRIRLLADG-VSEDELKKIDAAVRKIVAEA 312 Query: 344 VEFAQSDKEPDPAELYSDIL 363 +FA SDKEPDP EL++D++ Sbjct: 313 ADFAVSDKEPDPGELWTDVV 332 >gi|99080920|ref|YP_613074.1| pyruvate dehydrogenase (lipoamide) [Ruegeria sp. TM1040] gi|99037200|gb|ABF63812.1| Pyruvate dehydrogenase (lipoamide) [Ruegeria sp. TM1040] Length = 337 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 198/318 (62%), Positives = 250/318 (78%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S + E+ YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ Sbjct: 10 SNVSAEELTKYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDK 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +T+YR+HGH+LACG+DA +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV Sbjct: 70 RVTSYRDHGHMLACGMDAGGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVGAQV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AF++KY+ +D++ FGDGAANQGQVYE++N+A LW+L VI+VIENNQYAMGT Sbjct: 130 PLGAGLAFSDKYKGNDRVTFTYFGDGAANQGQVYETYNMAQLWDLPVIFVIENNQYAMGT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R++ KRG ++ I G +VDGM++ AVK ++AVA+CRA KGP I+E+ TYRY Sbjct: 190 SVQRSTKSPALWKRGEAYGIKGEEVDGMNVLAVKEAGERAVAHCRAGKGPYILEVKTYRY 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE+ +MR DPIEQVR+ LL K ASE DLK I+ ++ I+N S Sbjct: 250 RGHSMSDPAKYRTREEVQKMREERDPIEQVREMLLTGKHASEEDLKAIDKEIKDIVNKSA 309 Query: 345 EFAQSDKEPDPAELYSDI 362 +FA+ EP EL++DI Sbjct: 310 DFAKESPEPALEELWTDI 327 >gi|260576743|ref|ZP_05844728.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhodobacter sp. SW2] gi|259020995|gb|EEW24306.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhodobacter sp. SW2] Length = 329 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 198/320 (61%), Positives = 249/320 (77%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E S +K++ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + G Sbjct: 8 EKSNVSKDELLHFYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAKPG 67 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+ +T+YR+HGH+LACG+DA +MAELTGR GG S+GKGGSMHMFS + FYGGHGIVGA Sbjct: 68 DKRLTSYRDHGHMLACGMDAKGVMAELTGRAGGYSRGKGGSMHMFSKEKHFYGGHGIVGA 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV LG G+AFA+KY +D + FGDGAANQGQVYE++N+A LWNL VI+VIENNQYAM Sbjct: 128 QVPLGAGLAFADKYLGNDNVTFAYFGDGAANQGQVYETYNMAQLWNLPVIFVIENNQYAM 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTS+ R++ + +RG ++ I G VDGMD+ AVKA +KAVA CRA +GP I+EM+TY Sbjct: 188 GTSMKRSTRGPSLWERGAAYGIKGEPVDGMDVLAVKAAAEKAVAVCRAGEGPYILEMMTY 247 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDPA YRTREE+ +M+ D IE VR LL AS+ DLK I+ +++ I+N Sbjct: 248 RYRGHSMSDPAKYRTREEVQKMKDEKDAIEHVRDLLLGAGLASDEDLKAIDRDIKAIVNE 307 Query: 343 SVEFAQSDKEPDPAELYSDI 362 + EFA+ EPD AEL++DI Sbjct: 308 AAEFAKESPEPDVAELWTDI 327 >gi|113473791|ref|YP_718054.1| pyruvate dehydrogenase (lipoamide) [Sphingomonas sp. KA1] gi|112821471|dbj|BAF03342.1| pyruvate dehydrogenase (lipoamide) [Sphingomonas sp. KA1] Length = 357 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 184/318 (57%), Positives = 246/318 (77%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMI 106 + E+ L Y MLLIRRFEE+AGQLYG+G++GGFCHL IGQEAV VG++ +LT G D +I Sbjct: 38 SDEELLKFYEQMLLIRRFEERAGQLYGLGLIGGFCHLYIGQEAVAVGLQSALTPGKDSVI 97 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HGH+LA G+D IMAELTGR GIS+GKGGSMHMFS + FYGGHGIVGAQV L Sbjct: 98 TGYRDHGHMLAYGIDPKVIMAELTGRAAGISRGKGGSMHMFSVDHKFYGGHGIVGAQVPL 157 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AF++KY +C+ FGDGAANQGQVYE+FN+AALW+L +++V+ENN YAMGT+V Sbjct: 158 GAGLAFSHKYNEDGGVCMAYFGDGAANQGQVYEAFNMAALWSLPIVFVVENNGYAMGTAV 217 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R SA+T+F +RG +F IPGM V+GMD+ V+A + A+A+ R+ GP+++E+ TYRYRG Sbjct: 218 KRGSAETDFYRRGTAFRIPGMNVNGMDVLEVRAAAEVALAHVRSGAGPVLMELHTYRYRG 277 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR+REE+ +MR NHDPIE + L+ + SE +K+I+ +R + + +F Sbjct: 278 HSMSDPAKYRSREEVQDMRENHDPIEAAKAELV-KRGVSEERMKDIDKQIRSKVAEAADF 336 Query: 347 AQSDKEPDPAELYSDILI 364 A++ EP+ ELY+D+L+ Sbjct: 337 AENSPEPELPELYTDVLV 354 >gi|83593216|ref|YP_426968.1| pyruvate dehydrogenase (lipoamide) [Rhodospirillum rubrum ATCC 11170] gi|83576130|gb|ABC22681.1| Pyruvate dehydrogenase (lipoamide) [Rhodospirillum rubrum ATCC 11170] Length = 336 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 195/309 (63%), Positives = 247/309 (79%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ GD +IT+YR+HGH+ Sbjct: 26 YRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLQCQAHPGDSIITSYRDHGHM 85 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G+D +MAELTGR+GG SKGKGGSMHMFS +NGFYGGHGIVGAQV LGTG+AFA+K Sbjct: 86 LAAGMDPKGVMAELTGRRGGYSKGKGGSMHMFSKENGFYGGHGIVGAQVPLGTGLAFAHK 145 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 YR +C GDGAANQGQVYESFN+AALW L VIYVIENN+Y MGTSV RASA + Sbjct: 146 YRGDGGVCFCYLGDGAANQGQVYESFNMAALWKLPVIYVIENNKYGMGTSVERASATKDL 205 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + RG ++ IPG+ V+GMD+ AVKA ++AV RA +GP+I+EM TYRYRGHSMSDPA Y Sbjct: 206 ATRGAAYGIPGISVNGMDVLAVKAESEEAVDRVRAGEGPLILEMKTYRYRGHSMSDPAKY 265 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RT+EE+++MR+ DPI+ +R+ ++ + E LKEI+ ++ +++ + EFAQ+ EPD Sbjct: 266 RTKEEVSKMRAESDPIDHLRQTIVSDAILDEEALKEIDKEIKSVVSQAAEFAQNSPEPDA 325 Query: 356 AELYSDILI 364 AELY+D+L+ Sbjct: 326 AELYTDVLV 334 >gi|11559813|gb|AAG38097.1|AF299324_1 pyruvate dehydrogenase alpha subunit [Azorhizobium caulinodans] Length = 339 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 204/327 (62%), Positives = 255/327 (77%), Gaps = 12/327 (3%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V F KEQEL AYR MLLIRRFEEKAGQ+YGMG++GGFCHL IGQEAV+VGM+M++ +GD Sbjct: 17 VPTFTKEQELLAYREMLLIRRFEEKAGQMYGMGLIGGFCHLYIGQEAVVVGMQMAMKQGD 76 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q+IT YR+HGH+LA G+++ +MAELTGR+GG SKGKGGSMHMFS + F+GGHGIVG Sbjct: 77 QVITGYRDHGHMLATGMESRGVMAELTGRKGGYSKGKGGSMHMFSIEKQFFGGHGIVGC- 135 Query: 164 VSLGTGIAFANKYRRSD------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G+A R + V FGDGAANQGQVYESFN+A LW L V+YVIEN Sbjct: 136 ----AGVAGHRPRLREPLSAENGSVSVTYFGDGAANQGQVYESFNMAELWKLPVVYVIEN 191 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD-IRAVKATMDKAVAYCRAHKGPII 276 N+YAMG++VSRASAQT+FSKRG SFNIPG QVDGMD + VKA ++A+ + R+ KGP I Sbjct: 192 NKYAMGSAVSRASAQTDFSKRGQSFNIPGEQVDGMDSAQPVKAAGERALEFARSGKGPYI 251 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +EM TYRYRGHSMSDPA YR++EE+ +MR+ HDPIEQVR RLL +E +LK+++ + Sbjct: 252 LEMQTYRYRGHSMSDPAKYRSKEEVQKMRTEHDPIEQVRNRLLEAGLVTEDELKKVDAEI 311 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 R I+N++ +FA D EPDP+ELY+DI+ Sbjct: 312 RDIVNDAADFATHDPEPDPSELYTDIV 338 >gi|58584467|ref|YP_198040.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase E1 component, alpha subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418783|gb|AAW70798.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase E1 component, eukaryotic type, alpha subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 329 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 185/316 (58%), Positives = 239/316 (75%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F KEQ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV VG + GD + Sbjct: 6 FTKEQVIEFYRKMLLIRRFEEKAGQLYGMGLIGGFCHLSIGQEAVAVGTYAASRPGDAFV 65 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HG +LAC + +MAELTG++ G SKGKGGSMH+F + F+GGHGIVGAQV + Sbjct: 66 TSYRDHGLMLACDSNPDVVMAELTGKETGCSKGKGGSMHIFDVEKQFFGGHGIVGAQVPI 125 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTGIAFAN+Y++ D + FGDGAANQGQVYESFN+A+LW L V+Y+IENN+YAMGTSV Sbjct: 126 GTGIAFANRYKKKDNVVFTYFGDGAANQGQVYESFNMASLWKLPVVYIIENNEYAMGTSV 185 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R++ T KRG SF IPG QV+GMD +V A +A Y R+ KGPI++EM TYRYRG Sbjct: 186 QRSTLVTELYKRGESFGIPGKQVNGMDFFSVYAATSEAAEYARSGKGPILLEMETYRYRG 245 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR++EE+ +M+ NHDPI ++K ++ NK ASE + K I+ +R ++ S F Sbjct: 246 HSMSDPATYRSKEEVEDMKQNHDPISTLKKCIIDNKIASEEECKAIDKEIRDLVKKSEGF 305 Query: 347 AQSDKEPDPAELYSDI 362 +++ +EP+ ELY+D+ Sbjct: 306 SKNSEEPNIDELYTDV 321 >gi|259419155|ref|ZP_05743072.1| pyruvate dehydrogenase E1 component, alpha subunit [Silicibacter sp. TrichCH4B] gi|259345377|gb|EEW57231.1| pyruvate dehydrogenase E1 component, alpha subunit [Silicibacter sp. TrichCH4B] Length = 337 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/318 (61%), Positives = 250/318 (78%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S + E+ YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ Sbjct: 10 SNVSAEELTKYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDK 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +T+YR+HGH+LACG+DA +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV Sbjct: 70 RVTSYRDHGHMLACGMDAGGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVGAQV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AF++KY+ +D++ FGDGAANQGQVYE++N+A LW+L V++VIENNQYAMGT Sbjct: 130 PLGAGLAFSDKYKGNDRVTFTYFGDGAANQGQVYETYNMAQLWDLPVVFVIENNQYAMGT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R++ KRG ++ I G +VDGM++ AVK ++AVA+CRA KGP I+E+ TYRY Sbjct: 190 SVQRSTKSPALWKRGEAYGIAGEEVDGMNVLAVKEAGERAVAHCRAGKGPYILEVKTYRY 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE+ +MR DPIEQVR+ LL K A+E DLK I+ ++ I+N S Sbjct: 250 RGHSMSDPAKYRTREEVQKMREERDPIEQVREMLLTGKHATEEDLKAIDKEIKDIVNKSA 309 Query: 345 EFAQSDKEPDPAELYSDI 362 +FA+ EP EL++DI Sbjct: 310 DFAKESPEPALEELWTDI 327 >gi|304321329|ref|YP_003854972.1| Pyruvate dehydrogenase E1 component subunit alpha [Parvularcula bermudensis HTCC2503] gi|303300231|gb|ADM09830.1| Pyruvate dehydrogenase E1 component, alpha subunit [Parvularcula bermudensis HTCC2503] Length = 327 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 194/314 (61%), Positives = 244/314 (77%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 +Q L YR+MLLIRRFEE+AGQLYGMG +GGFCHL IGQEAV+ G++ EGDQ+IT Y Sbjct: 13 DQLLEDYRMMLLIRRFEERAGQLYGMGHIGGFCHLYIGQEAVVTGLEALREEGDQVITGY 72 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+HGH+LACG+D +MAELTGR GG SKGKGGSMHMFST FYGGHGIVGAQV +G G Sbjct: 73 RDHGHMLACGMDPKGVMAELTGRDGGYSKGKGGSMHMFSTDKAFYGGHGIVGAQVPIGAG 132 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 IAFANKYR++D +C FGDGAANQGQV+E+ N+A LW+L V++VIENNQYAMGT+V RA Sbjct: 133 IAFANKYRKNDNVCFTYFGDGAANQGQVFEAMNMAELWDLPVVFVIENNQYAMGTAVKRA 192 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 SA T+ +RG SF IPG +VDGMD+ AV+ +AV + R GP ++EM TYRYRGHSM Sbjct: 193 SADTHLCRRGASFGIPGKEVDGMDVVAVRQEAKEAVDHARNGGGPYVLEMKTYRYRGHSM 252 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA YRTR+E+++MR++ DPIE+ +KRLL ++A E LK I+ ++ I + +FA Sbjct: 253 SDPAKYRTRQEVDDMRTHSDPIERCKKRLLDGEYADEETLKSIDTEIKAQIKEAADFALE 312 Query: 350 DKEPDPAELYSDIL 363 EP ELY+D++ Sbjct: 313 SPEPASKELYTDVV 326 >gi|126739338|ref|ZP_01755031.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter sp. SK209-2-6] gi|126719438|gb|EBA16147.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter sp. SK209-2-6] Length = 329 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 195/310 (62%), Positives = 249/310 (80%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT+YR+H Sbjct: 18 LQFYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDKRITSYRDH 77 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH+LACG+DA +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQV LG G+AF Sbjct: 78 GHMLACGMDAGGVMAELTGREGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVPLGAGLAF 137 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+KY + ++ FGDGAANQGQVYE+FN+AA+W+L V++VIENNQYAMGT+ +R+++ Sbjct: 138 ADKYLDNGRVTFTYFGDGAANQGQVYETFNMAAIWDLPVVFVIENNQYAMGTAQARSTST 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG +F IPG VDGM++ +VK ++AVA+CRA KGP I+E+ TYRYRGHSMSDP Sbjct: 198 PDIYTRGEAFGIPGEAVDGMNVLSVKEASERAVAHCRAGKGPYILEVKTYRYRGHSMSDP 257 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 A YRTREE+ +MRS DPIEQVR LL K ASE DLK I+ ++ ++N + +FA++ E Sbjct: 258 AKYRTREEVQKMRSERDPIEQVRDMLLTGKHASEDDLKAIDKEIKDVVNEAADFARTSPE 317 Query: 353 PDPAELYSDI 362 P EL++DI Sbjct: 318 PGLEELWTDI 327 >gi|148550593|ref|YP_001260032.1| pyruvate dehydrogenase (acetyl-transferring) [Sphingomonas wittichii RW1] gi|148503012|gb|ABQ71265.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphingomonas wittichii RW1] Length = 360 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 190/313 (60%), Positives = 239/313 (76%), Gaps = 2/313 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 L YR MLLIRRFEEKAGQLYG GM+GGFCHL IGQEAV VG++ ++ G D +IT YR+ Sbjct: 46 LELYRQMLLIRRFEEKAGQLYGFGMIGGFCHLYIGQEAVAVGLQSAMRVGKDSVITGYRD 105 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 HGH+LA G+D IMAELTGR GIS+GKGGSMHMFS +GFYGGHGIVGAQV LGTG+A Sbjct: 106 HGHMLAYGIDPKVIMAELTGRAAGISRGKGGSMHMFSVDHGFYGGHGIVGAQVGLGTGLA 165 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 F +KY +C+ FGDGAANQGQVYESFN+A LW L VI+VIENNQYAMGTSV+RASA Sbjct: 166 FKHKYADDGGVCLTYFGDGAANQGQVYESFNMAELWKLPVIFVIENNQYAMGTSVNRASA 225 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + +RG SF IPG+QVDGMD+ AV+ ++A + + KGPI++E+ TYRYRGHSMSD Sbjct: 226 EDQLYRRGESFRIPGIQVDGMDVLAVRGAAEEARQWVLSGKGPILLELKTYRYRGHSMSD 285 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 PA YR+REE+ +R D IE +++ L +E +LK +E +R+I+ + +FA+ Sbjct: 286 PAKYRSREEVQAVRDKSDAIEHLKQE-LEAAGVTEDELKALEKEIRQIVQEAADFAEQAP 344 Query: 352 EPDPAELYSDILI 364 EP+ AELY+D+L+ Sbjct: 345 EPELAELYTDVLV 357 >gi|163736625|ref|ZP_02144044.1| phosphoglycerate kinase [Phaeobacter gallaeciensis BS107] gi|161390495|gb|EDQ14845.1| pyruvate dehydrogenase E1 component subunit alpha [Phaeobacter gallaeciensis BS107] Length = 337 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 194/310 (62%), Positives = 246/310 (79%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + +GD+ +T+YR+H Sbjct: 18 LEYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEDGDKRVTSYRDH 77 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH+LACG+D S +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV LG G+AF Sbjct: 78 GHMLACGMDPSGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVGAQVPLGAGLAF 137 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 ++KY+ +D++ FGDGAANQGQVYE++N+A LW+L V++VIENNQYAMGTSV R++ Sbjct: 138 SDKYKGNDRVTFAYFGDGAANQGQVYETYNMAQLWDLPVVFVIENNQYAMGTSVQRSTKS 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 KRG ++ I G +VDGMD+ AVK ++AVA+CRA KGP I+E+ TYRYRGHSMSDP Sbjct: 198 PALWKRGEAYGIKGEEVDGMDVLAVKEAGERAVAHCRAGKGPYILEVKTYRYRGHSMSDP 257 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 A YRTREE+ +MR DPIEQVR LL K A+E DLK I+ ++ I+N S +F++ E Sbjct: 258 AKYRTREEVQKMREERDPIEQVRDMLLTGKHATEDDLKAIDKEIKDIVNKSADFSKESPE 317 Query: 353 PDPAELYSDI 362 P EL++DI Sbjct: 318 PALEELWTDI 327 >gi|254419039|ref|ZP_05032763.1| pyruvate dehydrogenase E1 component, alpha subunit [Brevundimonas sp. BAL3] gi|196185216|gb|EDX80192.1| pyruvate dehydrogenase E1 component, alpha subunit [Brevundimonas sp. BAL3] Length = 342 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 197/318 (61%), Positives = 248/318 (77%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMI 106 +KE L YR M+LIRRFEE+AGQLYGMG++GGFCHL IGQEAV VG++ S+ +G D++I Sbjct: 24 SKEDLLRFYREMVLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVAVGVQESVRQGHDKII 83 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HGH+LA G+D ++MAELTGR GG S+GKGGSMHMF GFYGGHGIVGAQVSL Sbjct: 84 TGYRDHGHMLAAGMDPKEVMAELTGRIGGSSRGKGGSMHMFDVPTGFYGGHGIVGAQVSL 143 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTG+AFA KYR D + V FGDGA+NQGQVYESFN+A LW L IY+IENNQYAMGTS+ Sbjct: 144 GTGLAFAGKYRGDDSVAFVYFGDGASNQGQVYESFNMAQLWKLPAIYIIENNQYAMGTSI 203 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+S+ T S+RG SF IPG QVDGMD+ AV+ + KAV RA +GP I+E+ TYRYRG Sbjct: 204 ERSSSTTQLSQRGASFGIPGEQVDGMDVLAVRDAVKKAVERARAGEGPYILEVKTYRYRG 263 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRT+EE++E++ DPI+ + K LL A+E +LK I+ ++ I+ +V+F Sbjct: 264 HSMSDPAKYRTKEEVDEVKKTRDPIDHI-KTLLAAANATEDELKAIDNEIKAIVAEAVQF 322 Query: 347 AQSDKEPDPAELYSDILI 364 AQ EPDP+ELY+D+ + Sbjct: 323 AQESPEPDPSELYTDVYV 340 >gi|126735932|ref|ZP_01751676.1| Pyruvate dehydrogenase (lipoamide) [Roseobacter sp. CCS2] gi|126714489|gb|EBA11356.1| Pyruvate dehydrogenase (lipoamide) [Roseobacter sp. CCS2] Length = 336 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 193/313 (61%), Positives = 247/313 (78%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E+ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ +T+Y Sbjct: 15 EELLGHYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAADEGDKRVTSY 74 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+HGH+LACG+D IMAELTGR+GG SKGKGGSMHMFS + FYGGHGIV AQV LG G Sbjct: 75 RDHGHMLACGMDPKGIMAELTGREGGFSKGKGGSMHMFSKEKHFYGGHGIVAAQVPLGAG 134 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +AF++KY+ +D++ FGDGAANQGQVYE++N+A LW+L V++VIENNQYAMGTSV R+ Sbjct: 135 LAFSDKYKGNDRVTFTYFGDGAANQGQVYETYNMAELWDLPVVFVIENNQYAMGTSVQRS 194 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + +RG ++ IPG +VDGM + AVK ++AVA+CRA KGP I+E+ TYRYRGHSM Sbjct: 195 TKSPSLWERGAAYGIPGEEVDGMSVLAVKEAGERAVAHCRAGKGPYILEVKTYRYRGHSM 254 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA YRTREE+ +MR DPIEQ+R LL K AS+ DLK I+ ++ I+N + EF++ Sbjct: 255 SDPAKYRTREEVQKMRDERDPIEQIRDMLLTGKHASDDDLKAIDKEIKAIVNEAAEFSKE 314 Query: 350 DKEPDPAELYSDI 362 EP EL++DI Sbjct: 315 SPEPALEELWTDI 327 >gi|254474655|ref|ZP_05088041.1| pyruvate dehydrogenase E1 component, alpha subunit [Ruegeria sp. R11] gi|214028898|gb|EEB69733.1| pyruvate dehydrogenase E1 component, alpha subunit [Ruegeria sp. R11] Length = 337 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 197/313 (62%), Positives = 247/313 (78%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E+ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT+Y Sbjct: 15 EELLEYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDKRITSY 74 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+HGH+LACG+D + +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV LG G Sbjct: 75 RDHGHMLACGMDPNGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVGAQVPLGAG 134 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +AF++KY+ +D++ FGDGAANQGQVYE++N+A LW+L VI+VIENNQYAMGTSV R+ Sbjct: 135 LAFSDKYKGNDRVTFTYFGDGAANQGQVYETYNMAQLWDLPVIFVIENNQYAMGTSVQRS 194 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + KRG ++ I G +VDGM++ AVK ++AVA+CRA KGP I+E+ TYRYRGHSM Sbjct: 195 TKSPALWKRGEAYGIAGEEVDGMNVLAVKEAGERAVAHCRAGKGPYILEVKTYRYRGHSM 254 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA YRTREE+ +MR DPIEQVR LL ASE DLK I+ ++ I+N S +FA+ Sbjct: 255 SDPAKYRTREEVQKMREERDPIEQVRDMLLTGNHASEDDLKAIDKEIKDIVNKSADFAKE 314 Query: 350 DKEPDPAELYSDI 362 EP EL++DI Sbjct: 315 SPEPALEELWTDI 327 >gi|126725377|ref|ZP_01741219.1| Pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacterales bacterium HTCC2150] gi|126704581|gb|EBA03672.1| Pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacterales bacterium HTCC2150] Length = 331 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/318 (61%), Positives = 247/318 (77%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S +KE+ S YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ Sbjct: 10 SNVDKEELFSHYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAATKEGDK 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +T+YR+HGH+LACG+D +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV Sbjct: 70 RVTSYRDHGHMLACGMDPKGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVGAQV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +G G+AFA+KY +D + FGDGAANQGQ+YE+FN+A+LW L VI+V+ENNQYAMGT Sbjct: 130 PIGAGLAFADKYLGNDNVSFAYFGDGAANQGQIYETFNMASLWKLPVIFVVENNQYAMGT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S+ RAS+ RG +F I G VDGMD+ AVKA +KAVA+CRA KGP I+EM TYRY Sbjct: 190 SLQRASSSPELYTRGAAFGISGEAVDGMDVLAVKAAGEKAVAHCRAGKGPYILEMKTYRY 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTR+E+ +MR DPI+ VR LL A+E LKEI+ ++K++N + Sbjct: 250 RGHSMSDPAKYRTRDEVQKMREERDPIDHVRDILLAAGHATEDSLKEIDKEIKKVVNEAA 309 Query: 345 EFAQSDKEPDPAELYSDI 362 EF++ P +EL++DI Sbjct: 310 EFSKESPLPALSELWTDI 327 >gi|330994552|ref|ZP_08318476.1| Pyruvate dehydrogenase E1 component subunit alpha [Gluconacetobacter sp. SXCC-1] gi|329758406|gb|EGG74926.1| Pyruvate dehydrogenase E1 component subunit alpha [Gluconacetobacter sp. SXCC-1] Length = 319 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 191/310 (61%), Positives = 251/310 (80%), Gaps = 1/310 (0%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 AY M+LIRRFEE+AGQLYGMG++GGFCHL IGQEAV+VG++M L +GD++IT+YR+HG Sbjct: 9 AYYQMVLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVVVGIQMELKQGDKIITSYRDHGQ 68 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +LA G+D +MAELTGR+GG S GKGGSMHMFS++ FYGGHGIVGAQVSLG G+AFAN Sbjct: 69 MLAAGMDPRGVMAELTGREGGYSHGKGGSMHMFSSEKHFYGGHGIVGAQVSLGIGLAFAN 128 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KYR +D++ V +G+GA+NQGQVYESFN+AAL L ++V+ENN+Y MGTSV RASA Sbjct: 129 KYRGTDEVSVTYYGEGASNQGQVYESFNLAALHRLPCLFVLENNRYGMGTSVERASASKA 188 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + G + IPGM VDGMD+ AV+A +AVA+CRA KGP+++E+ TYRYRGHSMSDPA Sbjct: 189 LWRNGEPWGIPGMYVDGMDVEAVRAAAAEAVAHCRAGKGPVLMEVDTYRYRGHSMSDPAK 248 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR R E++E+R NHDPI++VR+ LL + +E DLK ++ V+ ++ ++ EFAQ+ EPD Sbjct: 249 YRQRSEVDEIRKNHDPIDRVRRELL-ERGVAESDLKAMDDRVKAVVVDAAEFAQTSPEPD 307 Query: 355 PAELYSDILI 364 P+EL++DIL+ Sbjct: 308 PSELWTDILV 317 >gi|288958362|ref|YP_003448703.1| pyruvate dehydrogenase E1 component, alpha subunit [Azospirillum sp. B510] gi|288910670|dbj|BAI72159.1| pyruvate dehydrogenase E1 component, alpha subunit [Azospirillum sp. B510] Length = 339 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 201/321 (62%), Positives = 246/321 (76%), Gaps = 1/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + E+ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ +L EGD Sbjct: 18 VQAVSSEELLHYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGVQAALKEGD 77 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +IT+YR+HGH+LACG+DA +MAELTGR GG SKGKGGSMHMFS + FYGGHGIVG Q Sbjct: 78 DVITSYRDHGHMLACGMDAKGVMAELTGRIGGYSKGKGGSMHMFSREKNFYGGHGIVGGQ 137 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V LGTG+AF++KY + V GDGA NQGQVYESFN+AALW L V++VIENN+YAMG Sbjct: 138 VPLGTGLAFSHKYLNDGGVSAVYCGDGAINQGQVYESFNMAALWKLPVLFVIENNKYAMG 197 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TS RASA +RG ++ IPG QV+GMD+ VKA D+ V Y R GP+I+EM TYR Sbjct: 198 TSQERASA-GELHQRGAAYGIPGYQVNGMDVLDVKAAADQWVNYIREGNGPVILEMKTYR 256 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YRT+EE+ +MRS DPI+Q++ +LL A E LKEI+ V+ I+ S Sbjct: 257 YRGHSMSDPAKYRTKEEVEKMRSESDPIDQLKSKLLAGGHADEDKLKEIDREVKAIVTES 316 Query: 344 VEFAQSDKEPDPAELYSDILI 364 EFAQ EPDP+EL++DIL+ Sbjct: 317 AEFAQQSPEPDPSELWTDILV 337 >gi|163742727|ref|ZP_02150112.1| Pyruvate dehydrogenase (lipoamide) [Phaeobacter gallaeciensis 2.10] gi|161383982|gb|EDQ08366.1| Pyruvate dehydrogenase (lipoamide) [Phaeobacter gallaeciensis 2.10] Length = 337 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 193/310 (62%), Positives = 246/310 (79%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + +GD+ +T+YR+H Sbjct: 18 LEYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEDGDKRVTSYRDH 77 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH+LACG+D + +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV LG G+AF Sbjct: 78 GHMLACGMDPNGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVGAQVPLGAGLAF 137 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 ++KY+ +D++ FGDGAANQGQVYE++N+A LW+L V++VIENNQYAMGTSV R++ Sbjct: 138 SDKYKGNDRVTFAYFGDGAANQGQVYETYNMAQLWDLPVVFVIENNQYAMGTSVQRSTKS 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 KRG ++ I G +VDGMD+ AVK ++AVA+CRA KGP I+E+ TYRYRGHSMSDP Sbjct: 198 PALWKRGEAYGIKGEEVDGMDVLAVKEAGERAVAHCRAGKGPYILEVKTYRYRGHSMSDP 257 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 A YRTREE+ +MR DPIEQVR LL K A+E DLK I+ ++ I+N S +F++ E Sbjct: 258 AKYRTREEVQKMREERDPIEQVRDMLLTGKHATEDDLKAIDKEIKDIVNKSADFSKESPE 317 Query: 353 PDPAELYSDI 362 P EL++DI Sbjct: 318 PALEELWTDI 327 >gi|159044701|ref|YP_001533495.1| pyruvate dehydrogenase E1 component subunit alpha [Dinoroseobacter shibae DFL 12] gi|157912461|gb|ABV93894.1| pyruvate dehydrogenase E1 component subunit alpha [Dinoroseobacter shibae DFL 12] Length = 331 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 192/315 (60%), Positives = 251/315 (79%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +KE +S YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + +GD+ +T Sbjct: 13 SKEDLMSYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEDGDKRVT 72 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+HGH+LACG+D +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV +G Sbjct: 73 SYRDHGHMLACGMDPKGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVGAQVPIG 132 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+AF++KYR +D++ FGDGAANQGQVYE++N+A LW L V++VIENNQYAMGTSV+ Sbjct: 133 AGLAFSDKYRGNDRVTFAYFGDGAANQGQVYETYNMAELWMLPVVFVIENNQYAMGTSVA 192 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++ + +RG ++ IPG +VDGMD+ AVKA +KAVA+CRA KGP I+E+ TYRYRGH Sbjct: 193 RSTKSPSLWERGAAYGIPGEEVDGMDVLAVKAAGEKAVAHCRAGKGPYILEVKTYRYRGH 252 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YRTREE+ ++R D IE VR+ LL ASE +LK I+ ++ ++N + EF+ Sbjct: 253 SMSDPAKYRTREEVQKVREQRDAIEHVREMLLSGNHASEDELKAIDKEIKAVVNEAAEFS 312 Query: 348 QSDKEPDPAELYSDI 362 + EP +EL++DI Sbjct: 313 RESPEPALSELWTDI 327 >gi|119386599|ref|YP_917654.1| pyruvate dehydrogenase (acetyl-transferring) [Paracoccus denitrificans PD1222] gi|119377194|gb|ABL71958.1| Pyruvate dehydrogenase (acetyl-transferring) [Paracoccus denitrificans PD1222] Length = 343 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 199/315 (63%), Positives = 247/315 (78%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +K++ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ EGD+ IT Sbjct: 15 SKDELLKYYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLESIAKEGDKRIT 74 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+HGH+LACG++A +MAELTGR GG SKGKGGSMHMFS + FYGGHGIV AQV LG Sbjct: 75 SYRDHGHMLACGMEARGVMAELTGRIGGYSKGKGGSMHMFSREKHFYGGHGIVAAQVPLG 134 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+AFA+KY +D + V FGDGA+NQGQVYE++N+A LW L V++VIENNQYAMGTS+ Sbjct: 135 AGLAFADKYLGNDNVTFVYFGDGASNQGQVYETYNMAELWELPVVFVIENNQYAMGTSMK 194 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++ T RG SF I G QVDGMD+ AV+A +KAVA+CRA KGP I+E++TYRYRGH Sbjct: 195 RSTKSTTLFGRGESFGIKGEQVDGMDVLAVRAAGEKAVAHCRAGKGPYILEVMTYRYRGH 254 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YRTREE+ +MR D IE VR+ LL + ASE DLK I+ ++ I+N+S EFA Sbjct: 255 SMSDPAKYRTREEVQKMRDERDAIEHVRELLLQGQHASEEDLKAIDKEIKDIVNDSAEFA 314 Query: 348 QSDKEPDPAELYSDI 362 + EP EL++DI Sbjct: 315 KESPEPPLEELWTDI 329 >gi|148261801|ref|YP_001235928.1| pyruvate dehydrogenase (acetyl-transferring) [Acidiphilium cryptum JF-5] gi|326405304|ref|YP_004285386.1| pyruvate dehydrogenase E1 component alpha subunit [Acidiphilium multivorum AIU301] gi|146403482|gb|ABQ32009.1| Pyruvate dehydrogenase (acetyl-transferring) [Acidiphilium cryptum JF-5] gi|325052166|dbj|BAJ82504.1| pyruvate dehydrogenase E1 component alpha subunit [Acidiphilium multivorum AIU301] Length = 345 Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust. Identities = 192/318 (60%), Positives = 254/318 (79%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++++ L+AY MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+ GM++++ GDQ+I Sbjct: 27 MDRDELLAAYEKMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVTGMQLAIEPGDQVI 86 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HGH++AC +D +MAELTGR GG SKGKGGSMHMFS + GF+GGHGIVGAQVSL Sbjct: 87 TSYRDHGHMIACDMDPKGVMAELTGRAGGYSKGKGGSMHMFSKEKGFFGGHGIVGAQVSL 146 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTG+AFAN YR +D++C+ FG+GA+NQGQV+ESFN+AAL L VI++IENN+Y MGTSV Sbjct: 147 GTGLAFANHYRGNDRVCLTYFGEGASNQGQVFESFNLAALMKLPVIFIIENNRYGMGTSV 206 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA + S G ++IPG+QVDGMD++AVK ++AVA+CRA GP ++EM TYRYRG Sbjct: 207 ERASASRDLSLNGAPWSIPGLQVDGMDVQAVKEAGEQAVAHCRAGNGPFLLEMKTYRYRG 266 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTREE+ +MR+ HD I+ RK L S+ K I+ +++K + ++ +F Sbjct: 267 HSMSDPAKYRTREEVQKMRTEHDCIDLARK-ALEAMGVSDEMFKAIDDDIKKRVQDAADF 325 Query: 347 AQSDKEPDPAELYSDILI 364 AQ EPD +EL++D+L+ Sbjct: 326 AQQSPEPDESELWTDVLV 343 >gi|260433372|ref|ZP_05787343.1| pyruvate dehydrogenase E1 component, alpha subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260417200|gb|EEX10459.1| pyruvate dehydrogenase E1 component, alpha subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 329 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 196/313 (62%), Positives = 248/313 (79%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E+ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT+Y Sbjct: 15 EELKTYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDKRITSY 74 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+HGH+LACG+D +MAELTGR GG+SKGKGGSMHMFS + FYGGHGIVGAQV LG G Sbjct: 75 RDHGHMLACGMDPGGVMAELTGRIGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVPLGAG 134 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +AFA+KY+ + ++ FGDGAANQGQVYE+FN+AA+W L V++VIENNQYAMGT+ SR+ Sbjct: 135 LAFADKYKDNGRVTFTYFGDGAANQGQVYETFNMAAIWQLPVVFVIENNQYAMGTAQSRS 194 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 ++ + RG +F IPG V+GMD+ AVK +KAVA+CRA KGP I+E+ TYRYRGHSM Sbjct: 195 TSTKDIYHRGEAFGIPGEIVNGMDVLAVKEAGEKAVAHCRAGKGPYILEVKTYRYRGHSM 254 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA YRTREE+ ++R DPIE VR+ LL K ASE DLK I+ +++I+N + EFA+ Sbjct: 255 SDPAKYRTREEVQKVREQSDPIEHVRELLLSGKHASEDDLKAIDKEIKEIVNQAAEFAKE 314 Query: 350 DKEPDPAELYSDI 362 EP EL++DI Sbjct: 315 SPEPPVEELWTDI 327 >gi|255262694|ref|ZP_05342036.1| pyruvate dehydrogenase E1 component, alpha subunit [Thalassiobium sp. R2A62] gi|255105029|gb|EET47703.1| pyruvate dehydrogenase E1 component, alpha subunit [Thalassiobium sp. R2A62] Length = 333 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 194/310 (62%), Positives = 244/310 (78%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ +T+YR+H Sbjct: 18 LGHYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAADEGDKRVTSYRDH 77 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH+LACG+D IMAELTGR+GG SKGKGGSMHMFS + FYGGHGIV AQV LG G+AF Sbjct: 78 GHMLACGMDPKGIMAELTGREGGFSKGKGGSMHMFSKEKHFYGGHGIVAAQVPLGAGLAF 137 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 ++KY+ +D++ FGDGAANQGQVYE++N+A LW+L V++VIENNQYAMGTSV R++ Sbjct: 138 SDKYKGNDRVTFAYFGDGAANQGQVYETYNMAELWDLPVVFVIENNQYAMGTSVQRSTKS 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + +RG ++ I G +VDGMD+ AVK +KAVA+CRA KGP I+E+ TYRYRGHSMSDP Sbjct: 198 PSLWERGAAYGIEGEEVDGMDVLAVKEAGEKAVAHCRAGKGPYILEVKTYRYRGHSMSDP 257 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 A YRTREE+ +MR DPIEQVR LL K ASE DLK I+ ++ I+N + EF++ E Sbjct: 258 AKYRTREEVQKMRDERDPIEQVRDLLLTGKHASEDDLKSIDKEIKAIVNEAAEFSKESPE 317 Query: 353 PDPAELYSDI 362 EL++DI Sbjct: 318 LALEELWTDI 327 >gi|146277141|ref|YP_001167300.1| pyruvate dehydrogenase (acetyl-transferring) [Rhodobacter sphaeroides ATCC 17025] gi|145555382|gb|ABP69995.1| Pyruvate dehydrogenase (acetyl-transferring) [Rhodobacter sphaeroides ATCC 17025] Length = 329 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 195/320 (60%), Positives = 248/320 (77%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E S ++E+ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EG Sbjct: 8 EQSNASREELLHYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAKEG 67 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+ IT+YR+HGH+LACG+DA +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGA Sbjct: 68 DKRITSYRDHGHMLACGMDAKGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVGA 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV LG G+AFA++Y +D + FGDGAANQGQVYE++N+A LW+L VI+VIENNQYAM Sbjct: 128 QVPLGAGLAFADRYLGNDNVTFAYFGDGAANQGQVYEAYNMAKLWSLPVIFVIENNQYAM 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R++ + +RG ++ I G VDGMD+ AVKA +KAVA CRA +GP I+EM+TY Sbjct: 188 GTSVKRSTKSPSLWERGAAYGIKGEAVDGMDVLAVKAAGEKAVAACRAGQGPYILEMMTY 247 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDPA YRTREE+ MR D IE VR L+ A++ DLK I+ +++ ++N Sbjct: 248 RYRGHSMSDPAKYRTREEVQRMRDEKDAIEHVRDLLIQGNLATDDDLKAIDKDIKAVVNE 307 Query: 343 SVEFAQSDKEPDPAELYSDI 362 + +FA+ EP EL++DI Sbjct: 308 AADFAKESPEPALEELWTDI 327 >gi|56697103|ref|YP_167466.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Ruegeria pomeroyi DSS-3] gi|56678840|gb|AAV95506.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Ruegeria pomeroyi DSS-3] Length = 330 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 193/307 (62%), Positives = 245/307 (79%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT+YR+HGH+ Sbjct: 22 YREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDKRITSYRDHGHM 81 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LACG+D +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQV LG G+AFA+K Sbjct: 82 LACGMDPGGVMAELTGREGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVPLGAGLAFADK 141 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y+ + ++ FGDGAANQGQVYE+FN+AALW L VI+VIENNQYAMGT+ R+++ + Sbjct: 142 YQDNGRVTFTYFGDGAANQGQVYETFNMAALWKLPVIFVIENNQYAMGTAQKRSTSSPDI 201 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 RG +F IPG VDGM++ +VK +KAVA+CRA KGP I+E+ TYRYRGHSMSDPA Y Sbjct: 202 YTRGEAFGIPGETVDGMNVLSVKEAGEKAVAHCRAGKGPYILEVKTYRYRGHSMSDPAKY 261 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREE+ ++R DPIE VR+ LL K A+E DLK I+ +++I+N + EF++ EP Sbjct: 262 RTREEVQKVREQSDPIEMVREMLLSGKHATEDDLKAIDKEIKEIVNQAAEFSKESPEPSV 321 Query: 356 AELYSDI 362 EL++DI Sbjct: 322 DELWTDI 328 >gi|89054182|ref|YP_509633.1| pyruvate dehydrogenase (lipoamide) [Jannaschia sp. CCS1] gi|88863731|gb|ABD54608.1| Pyruvate dehydrogenase (lipoamide) [Jannaschia sp. CCS1] Length = 347 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 193/307 (62%), Positives = 242/307 (78%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ +T+YR+HGH+ Sbjct: 30 YREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDKRVTSYRDHGHM 89 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LACG+D +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIV AQV +G G+AFA+K Sbjct: 90 LACGMDPKGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVAAQVPIGAGLAFADK 149 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y +D++ FGDGAANQGQVYE++N+A +W L I+VIENNQYAMGTS R++ ++ Sbjct: 150 YLGNDRVTFTYFGDGAANQGQVYEAYNMAEIWGLPCIFVIENNQYAMGTSTKRSTHSPSY 209 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 +RG ++ IPG +VDGMD+ AVKA +KAVA+CRA KGP I+E+ TYRYRGHSMSDPA Y Sbjct: 210 WERGAAYGIPGEEVDGMDVLAVKAAGEKAVAHCRAGKGPYILEIKTYRYRGHSMSDPAKY 269 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREE+ EMR D IE VR+ LL ASE DLK I+ +++I+N S EFA+ EP Sbjct: 270 RTREEVQEMREKRDAIEHVRQMLLTGGHASEDDLKAIDKEIKEIVNASAEFAKESPEPAL 329 Query: 356 AELYSDI 362 EL++DI Sbjct: 330 EELWTDI 336 >gi|77463042|ref|YP_352546.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacter sphaeroides 2.4.1] gi|126461917|ref|YP_001043031.1| pyruvate dehydrogenase (acetyl-transferring) [Rhodobacter sphaeroides ATCC 17029] gi|221638900|ref|YP_002525162.1| Pyruvate dehydrogenase [Rhodobacter sphaeroides KD131] gi|332557918|ref|ZP_08412240.1| Pyruvate dehydrogenase [Rhodobacter sphaeroides WS8N] gi|77387460|gb|ABA78645.1| Pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacter sphaeroides 2.4.1] gi|126103581|gb|ABN76259.1| Pyruvate dehydrogenase (acetyl-transferring) [Rhodobacter sphaeroides ATCC 17029] gi|221159681|gb|ACM00661.1| Pyruvate dehydrogenase [Rhodobacter sphaeroides KD131] gi|332275630|gb|EGJ20945.1| Pyruvate dehydrogenase [Rhodobacter sphaeroides WS8N] Length = 329 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 195/320 (60%), Positives = 247/320 (77%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E S +KE+ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EG Sbjct: 8 EQSNASKEELVRYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAKEG 67 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+ IT+YR+HGH+LACG+DA +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGA Sbjct: 68 DKRITSYRDHGHMLACGMDAKGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVGA 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV LG G+AFA++Y +D + FGDGAANQGQVYE++N+A LW+L VI+VIENNQYAM Sbjct: 128 QVPLGAGLAFADRYLGNDNVTFTYFGDGAANQGQVYEAYNMARLWSLPVIFVIENNQYAM 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R++ + +RG ++ I G VDGMD+ AVKA +KAVA CRA +GP I+EM+TY Sbjct: 188 GTSVKRSTKSPSLWERGAAYGIKGESVDGMDVLAVKAAGEKAVAACRAGQGPYILEMMTY 247 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDPA YRTREE+ MR D IE VR L+ A++ DLK I+ ++ ++N Sbjct: 248 RYRGHSMSDPAKYRTREEVQRMRDEKDAIEHVRDLLIQGNLATDDDLKAIDKEIKAVVNE 307 Query: 343 SVEFAQSDKEPDPAELYSDI 362 + +FA+ EP EL++DI Sbjct: 308 AADFAKESPEPALEELWTDI 327 >gi|16125970|ref|NP_420534.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase subunit alpha [Caulobacter crescentus CB15] gi|221234736|ref|YP_002517172.1| pyruvate dehydrogenase E1 component subunit alpha [Caulobacter crescentus NA1000] gi|13423142|gb|AAK23702.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Caulobacter crescentus CB15] gi|220963908|gb|ACL95264.1| pyruvate dehydrogenase E1 component alpha subunit [Caulobacter crescentus NA1000] Length = 343 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 191/316 (60%), Positives = 247/316 (78%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K++ L Y+ MLLIRRFEE+AGQLYGMG++GGFCHL IGQEA+ VGM+ +GDQ+IT Sbjct: 25 KDELLKFYQDMLLIRRFEERAGQLYGMGLIGGFCHLYIGQEAIAVGMQSISQKGDQIITG 84 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HGH+LA G+D ++MAELTGR GG SKGKGGSMHMF GFYGGHGIVGAQV+LGT Sbjct: 85 YRDHGHMLAAGMDPREVMAELTGRAGGSSKGKGGSMHMFDIATGFYGGHGIVGAQVALGT 144 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A AN YR + + GDGAANQGQVYESFN+A LW L V+YVIENNQYAMGT+V R Sbjct: 145 GLALANSYRNNGNVSYAYMGDGAANQGQVYESFNMAQLWKLPVVYVIENNQYAMGTAVER 204 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 A+++T F KRGVSF IPG +VDGMD+ AV+ +A + R+ +GP I+EM TYRYRGHS Sbjct: 205 AASETAFHKRGVSFRIPGEEVDGMDVIAVREAGARATEHARSGQGPYILEMKTYRYRGHS 264 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YRT+EE++E+++ DPI+ +++RL +E DLK ++ V++I+ + EFA+ Sbjct: 265 MSDPAKYRTKEEVDEVKTTRDPIDHIKERLA-KAGVTEDDLKGVDAEVKRIVAEAAEFAR 323 Query: 349 SDKEPDPAELYSDILI 364 + EPDP+ELY+D+ + Sbjct: 324 TSPEPDPSELYTDVYL 339 >gi|254511643|ref|ZP_05123710.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacteraceae bacterium KLH11] gi|221535354|gb|EEE38342.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacteraceae bacterium KLH11] Length = 329 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 194/313 (61%), Positives = 249/313 (79%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E+ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT+Y Sbjct: 15 EELKTYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAKEGDKRITSY 74 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+HGH+LACG++ +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQV LG G Sbjct: 75 RDHGHMLACGMEPGGVMAELTGREGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVPLGAG 134 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +AFA+KY+ + + FGDGAANQGQVYE+FN+AA+W+L VI+VIENNQYAMGT+ +R+ Sbjct: 135 LAFADKYKENGGVTFTYFGDGAANQGQVYETFNMAAIWDLPVIFVIENNQYAMGTAQTRS 194 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 ++ + RG +F IPG V+GMD+ AVK +KAVA+CRA KGP I+E+ TYRYRGHSM Sbjct: 195 TSTKDIYHRGEAFGIPGEIVNGMDVLAVKEAGEKAVAHCRAGKGPYILEVKTYRYRGHSM 254 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA YRTREE+ ++R DPIE VR+ LL K ASE DLK I+ +++I+N + EF++ Sbjct: 255 SDPAKYRTREEVQKVREQSDPIEHVRELLLTGKHASEDDLKAIDKEIKEIVNQAAEFSKE 314 Query: 350 DKEPDPAELYSDI 362 EP EL++DI Sbjct: 315 SPEPSLDELWTDI 327 >gi|83950478|ref|ZP_00959211.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseovarius nubinhibens ISM] gi|83838377|gb|EAP77673.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseovarius nubinhibens ISM] Length = 308 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 193/306 (63%), Positives = 243/306 (79%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT YR+HGH+LAC Sbjct: 1 MLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLESATKEGDKRITTYRDHGHMLAC 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+D + +MAELTGR+GG SKGKGGSMHMFS FYGGHGIVGA V LG G+AFA+KY+ Sbjct: 61 GMDPNGVMAELTGREGGYSKGKGGSMHMFSRDKHFYGGHGIVGANVPLGAGLAFADKYKG 120 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 +D + FGDGAANQGQVYE+FN+AALW+L VI+VIENNQYAMGTS R+++ + R Sbjct: 121 NDNVTFTYFGDGAANQGQVYETFNMAALWSLPVIFVIENNQYAMGTSQKRSTSSPDIYTR 180 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 G +F IPG VDGMD+ AVK +KAVA+CR+ KGP I+E+ TYRYRGHSMSDPA YRTR Sbjct: 181 GAAFGIPGEAVDGMDVLAVKEAGEKAVAHCRSGKGPYILEVKTYRYRGHSMSDPAKYRTR 240 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +E+ ++R D IE VR+ LL K A+E DLK I+ ++ I+N S EFA++ EP+ +EL Sbjct: 241 DEVQKVRDEMDAIEHVRELLLQGKHATEDDLKAIDKEIKSIVNESAEFAKTSPEPEVSEL 300 Query: 359 YSDILI 364 ++DI + Sbjct: 301 WTDIYV 306 >gi|126728751|ref|ZP_01744566.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Sagittula stellata E-37] gi|126710681|gb|EBA09732.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Sagittula stellata E-37] Length = 340 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 192/309 (62%), Positives = 243/309 (78%) Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 S YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT+YR+HG Sbjct: 19 SWYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAADEGDKRITSYRDHG 78 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 H+LACG+D +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV LG G+AF+ Sbjct: 79 HMLACGMDPKGVMAELTGREGGYSKGKGGSMHMFSREKHFYGGHGIVGAQVPLGAGLAFS 138 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 +KYR +D++ FGDGAANQGQVYE+FN+AALW L VI+VIENNQYAMGT+ +R+++ Sbjct: 139 DKYRGNDRVTFTYFGDGAANQGQVYETFNMAALWKLPVIFVIENNQYAMGTAQARSTSTP 198 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + RG +F IPG VDGMD+ AV+ KAV +CR+ KGP I+E+ TYRYRGHSMSDPA Sbjct: 199 DLHTRGEAFGIPGEIVDGMDVTAVRDAGAKAVKHCRSGKGPYILEVKTYRYRGHSMSDPA 258 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTREE+ +MR DPIE VR+ LL K A+E DLK I+ ++ ++ + +F++ EP Sbjct: 259 KYRTREEVQKMREERDPIEHVREMLLQGKHATEEDLKAIDKEIKAVVTEAADFSRESPEP 318 Query: 354 DPAELYSDI 362 EL++DI Sbjct: 319 ALDELWTDI 327 >gi|295689365|ref|YP_003593058.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Caulobacter segnis ATCC 21756] gi|295431268|gb|ADG10440.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Caulobacter segnis ATCC 21756] Length = 343 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 189/316 (59%), Positives = 248/316 (78%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K++ L Y+ MLLIRRFEE+AGQLYGMG++GGFCHL IGQEA+ VGM+ +GDQ+IT Sbjct: 25 KDELLKFYQDMLLIRRFEERAGQLYGMGLIGGFCHLYIGQEAIAVGMQSISQKGDQIITG 84 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HGH+LA G+D ++MAELTGR GG SKGKGGSMHMF + GFYGGHGIVGAQVSLGT Sbjct: 85 YRDHGHMLAAGMDPREVMAELTGRAGGSSKGKGGSMHMFDVETGFYGGHGIVGAQVSLGT 144 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A AN Y+ + + GDGAANQGQVYESFN+A LW L V+YVIENNQYAMGT+V R Sbjct: 145 GLALANAYKGNGNVSYAYMGDGAANQGQVYESFNMAQLWKLPVVYVIENNQYAMGTAVER 204 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++++T F KRG+SF IPG +VDGMD+ AV+ +A + R+ +GP I+EM TYRYRGHS Sbjct: 205 SASETAFHKRGISFRIPGEEVDGMDVVAVREAGARATEHARSGQGPYILEMKTYRYRGHS 264 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YRT+EE++E+++ DPI+ +++RL +E DLK ++ V++I+ + EFA+ Sbjct: 265 MSDPAKYRTKEEVDEVKTTRDPIDHIKERLA-KAGVTEDDLKSVDAEVKRIVAEAAEFAR 323 Query: 349 SDKEPDPAELYSDILI 364 + EPDP+ELY+D+ + Sbjct: 324 TSPEPDPSELYTDVYL 339 >gi|209963466|ref|YP_002296381.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodospirillum centenum SW] gi|209956932|gb|ACI97568.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodospirillum centenum SW] Length = 337 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 195/345 (56%), Positives = 259/345 (75%), Gaps = 11/345 (3%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 ++S +RA ++ + +P E+ L YR MLLIRRFEEKAGQ+YGMG++G Sbjct: 2 AMSKRRAKGAAPEAATLP----------GPEELLKYYREMLLIRRFEEKAGQMYGMGLIG 51 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL IGQEAV+VG++ +L GD +IT+YR+HGH+LAC +D +MAELTGR+GG SKG Sbjct: 52 GFCHLYIGQEAVVVGIQNALRPGDSIITSYRDHGHMLACQMDPKGVMAELTGRRGGYSKG 111 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMFS + F+GGHGIVGAQV +GTG+AFA+KY + D I V GDGA NQGQVYE Sbjct: 112 KGGSMHMFSREKKFFGGHGIVGAQVPIGTGLAFAHKYAKDDGIAVCYMGDGAVNQGQVYE 171 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 SFN+AALW+L V+YVIENN+YAMGT+ +R+SA RG ++ IPG QV+GMD+ V+ Sbjct: 172 SFNMAALWHLPVLYVIENNKYAMGTAQTRSSA-GELYMRGSAYGIPGRQVNGMDVLEVRG 230 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 D+AVA+ R +GP+I+EM TYRYRGHSMSDPA YRT+EE+N+MRS DPI+ ++ +LL Sbjct: 231 AADEAVAHVRGGQGPMILEMKTYRYRGHSMSDPAKYRTKEEVNKMRSESDPIDHLKTKLL 290 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 +A E LK I+ V++++ + EFA EPDP+EL++D+L+ Sbjct: 291 EKSYADEDALKVIDREVKQVVTEAAEFATQSPEPDPSELWTDVLV 335 >gi|148554145|ref|YP_001261727.1| pyruvate dehydrogenase [Sphingomonas wittichii RW1] gi|148499335|gb|ABQ67589.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphingomonas wittichii RW1] Length = 376 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 191/318 (60%), Positives = 246/318 (77%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMI 106 +KE+ L YR MLLIRRFEEKAGQLYG+G++GGFCHL IGQEAV VG++ +L G D +I Sbjct: 57 SKEEMLEFYRQMLLIRRFEEKAGQLYGLGLIGGFCHLYIGQEAVAVGLQSALEVGKDSVI 116 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HGH+LA G+D IMAELTGR GIS+GKGGSMHMFS + FYGGHGIVGAQVSL Sbjct: 117 TGYRDHGHMLAYGIDPKLIMAELTGRAAGISRGKGGSMHMFSVDHRFYGGHGIVGAQVSL 176 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTG+AF +KY + + FGDGA+NQGQVYESFN+A LW L +I+VIENNQYAMGTSV Sbjct: 177 GTGLAFKHKYAGDGGVAMAYFGDGASNQGQVYESFNMAELWKLPIIFVIENNQYAMGTSV 236 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +R+SA+ +RG SF IPG+QVDGMD+ AV+ ++AVA+ RA KGPI++E+ TYRYRG Sbjct: 237 NRSSAEDQLYRRGESFRIPGIQVDGMDVLAVRGAAEEAVAWVRAGKGPILLELKTYRYRG 296 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR+R+E+ +R DPI+ ++K L E +L+ +E ++R I+ + +F Sbjct: 297 HSMSDPAKYRSRDEVQSVREKSDPIDHLKKE-LEAAGVGEDELRTLEKDIRAIVTEAADF 355 Query: 347 AQSDKEPDPAELYSDILI 364 A+ EP+P ELY+D+L+ Sbjct: 356 AEQSPEPEPEELYTDVLV 373 >gi|114327847|ref|YP_745004.1| pyruvate dehydrogenase E1 component alpha subunit [Granulibacter bethesdensis CGDNIH1] gi|114316021|gb|ABI62081.1| pyruvate dehydrogenase E1 component alpha subunit [Granulibacter bethesdensis CGDNIH1] Length = 364 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 185/317 (58%), Positives = 246/317 (77%), Gaps = 1/317 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +++ L+A++ M+LIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ +L +GDQ++ Sbjct: 42 LDQKALLTAFQDMMLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGIQAALEDGDQVV 101 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HGH+LA G+D +MAELTGR+ G S+GKGGSMHMFS + FYGGHGIVGAQV + Sbjct: 102 TSYRDHGHMLATGMDPKGVMAELTGRRDGYSRGKGGSMHMFSREKNFYGGHGIVGAQVPI 161 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GIA+AN+YR + K+ VV +GDGA++QGQVYE++N+AAL L V++VIENN+Y MGTSV Sbjct: 162 AAGIAYANQYRGNGKVSVVYYGDGASSQGQVYETYNLAALLKLPVLFVIENNKYGMGTSV 221 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A + S+ G +NIPG QVDGMD++AV +AVA+CR+ KGP ++EM TYRYRG Sbjct: 222 DRATASHDLSQNGTPWNIPGRQVDGMDVQAVYEAAREAVAHCRSGKGPYLLEMQTYRYRG 281 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDP YRTREEI +MR+ D I+ R+ L+ E LKEIE ++K + + F Sbjct: 282 HSMSDPGKYRTREEIQKMRAERDCIDHARQELI-ALGTDETVLKEIEDAIKKRVAEAATF 340 Query: 347 AQSDKEPDPAELYSDIL 363 AQ EPD +EL++DIL Sbjct: 341 AQESPEPDESELWTDIL 357 >gi|329850654|ref|ZP_08265499.1| pyruvate dehydrogenase acetyl-transferring E1 component, alpha subunit [Asticcacaulis biprosthecum C19] gi|328840969|gb|EGF90540.1| pyruvate dehydrogenase acetyl-transferring E1 component, alpha subunit [Asticcacaulis biprosthecum C19] Length = 335 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 196/322 (60%), Positives = 252/322 (78%), Gaps = 1/322 (0%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G ++S +K++ L YR M+LIRRFEE+AGQLYGMG++GGFCHL IGQEAV VGM+ + Sbjct: 11 GKKLSNVSKDELLKYYREMVLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVAVGMEAASK 70 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 +GDQ+IT YR+HGH+LA G+D +MAELTGR GG SKGKGGSMHMF GFYGGHGIV Sbjct: 71 DGDQVITGYRDHGHMLAAGMDPKAVMAELTGRAGGSSKGKGGSMHMFDIATGFYGGHGIV 130 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AF++ YR++ + FGDGAANQGQVYESFN+A LW L V+YVIENN+Y Sbjct: 131 GAQVSLGTGLAFSDYYRQNGNVSFTYFGDGAANQGQVYESFNMAQLWKLPVVYVIENNEY 190 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS++RASA N S+RG SF IPG VDGMD+ AVK ++A + R+ KGP I+EM Sbjct: 191 AMGTSLARASATVNLSQRGASFGIPGETVDGMDVFAVKDAAERAAEHARSGKGPYILEMK 250 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YR++EE+ E+++ DPI+ + K +L +E ++K I+ +V+ I+ Sbjct: 251 TYRYRGHSMSDPAKYRSKEEVEEVKTTRDPIDHI-KTMLQQAGVAEDEIKAIDADVKAIV 309 Query: 341 NNSVEFAQSDKEPDPAELYSDI 362 +VEFAQ+ EPDP+EL++DI Sbjct: 310 LEAVEFAQTSPEPDPSELFTDI 331 >gi|83311415|ref|YP_421679.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Magnetospirillum magneticum AMB-1] gi|82946256|dbj|BAE51120.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Magnetospirillum magneticum AMB-1] Length = 332 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 184/320 (57%), Positives = 238/320 (74%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E ++ + YR MLLIRRFEEKAGQLYGMG++ GFCHL IGQEAV+VGM+ D Sbjct: 11 AEPTPQELIRYYREMLLIRRFEEKAGQLYGMGLINGFCHLYIGQEAVVVGMQAVAGAADS 70 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 IT+YR+HGH+L CG+D +MAELTGR GG S+GKGGSMHMFS + FYGGHGIVGAQV Sbjct: 71 CITSYRDHGHMLVCGMDPKGVMAELTGRAGGYSRGKGGSMHMFSREKRFYGGHGIVGAQV 130 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LGTG+ FA+KY + + + V GDGA NQGQVYE+FN+AALW L V++VIENN+YAMGT Sbjct: 131 PLGTGLGFAHKYSKDNGVAHVYCGDGAVNQGQVYEAFNMAALWKLPVVFVIENNKYAMGT 190 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S R +A RG ++ IPG V+GM+I AV+ +A+ + R+ GP I+EM TYRY Sbjct: 191 STVRHAAGQELYMRGAAYGIPGEPVNGMNIIAVRDAAARALEHARSGNGPYILEMNTYRY 250 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR++EE+ +MR HDPI+Q++++LL E LKEI+ V+ I+ + Sbjct: 251 RGHSMSDPAKYRSKEEVTKMREQHDPIDQLKEKLLAEGLIDEAGLKEIDREVKVIVTEAA 310 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+QS EPDP+EL++D+LI Sbjct: 311 EFSQSSPEPDPSELWTDVLI 330 >gi|315499906|ref|YP_004088709.1| pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit [Asticcacaulis excentricus CB 48] gi|315417918|gb|ADU14558.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Asticcacaulis excentricus CB 48] Length = 338 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 195/317 (61%), Positives = 250/317 (78%), Gaps = 1/317 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +K++ L YR M+LIRRFEE+AGQLYGMG++GGFCHL IGQEAV VGM+ + +GDQ+IT Sbjct: 21 SKDELLKYYREMVLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVAVGMEAASIDGDQVIT 80 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+HGH+LA G+D +MAELTGR GG SKGKGGSMHMF + GF+GGHGIVGAQVSLG Sbjct: 81 GYRDHGHMLAAGMDPKAVMAELTGRIGGSSKGKGGSMHMFDIETGFFGGHGIVGAQVSLG 140 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA+ YR + + FGDGAANQGQVYESFN+A LWNL V+YVIENN+YAMGT+++ Sbjct: 141 TGLAFADWYRNNGNVSFTYFGDGAANQGQVYESFNMAKLWNLPVVYVIENNEYAMGTALA 200 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RASA TN S+RG SF IPG VDGMD+ AVK ++A Y R+ KGP I+EM TYRYRGH Sbjct: 201 RASATTNLSQRGASFGIPGETVDGMDVFAVKEAAERAAEYARSGKGPYILEMKTYRYRGH 260 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR++EE++E+++ DPI+ + K +L E ++K I+ ++ I+ +VEFA Sbjct: 261 SMSDPAKYRSKEEVDEVKTTRDPIDHI-KTMLEQAGVEEAEIKAIDNEIKAIVMEAVEFA 319 Query: 348 QSDKEPDPAELYSDILI 364 Q+ EPDP+ELY+D+ + Sbjct: 320 QTSPEPDPSELYTDVYL 336 >gi|84517287|ref|ZP_01004641.1| Pyruvate dehydrogenase E1 component, alpha subunit [Loktanella vestfoldensis SKA53] gi|84508767|gb|EAQ05230.1| Pyruvate dehydrogenase E1 component, alpha subunit [Loktanella vestfoldensis SKA53] Length = 338 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 193/327 (59%), Positives = 253/327 (77%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 +P + S + E+ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG+ Sbjct: 3 MPPKQAAAKSNVSAEELLGHYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGL 62 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 + + EGD+ +T+YR+HGH+LACG+D IMAELTGR+GG SKGKGGSMHMFS + FYG Sbjct: 63 EAAAGEGDKRVTSYRDHGHMLACGMDPKGIMAELTGREGGFSKGKGGSMHMFSKEKHFYG 122 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 GHGIVGAQV LG G+AF++KY+ +D++ FGDGAANQGQVYE++N+A LW+L VI+VI Sbjct: 123 GHGIVGAQVPLGAGLAFSDKYKGNDRVTFAYFGDGAANQGQVYETYNMAQLWDLPVIFVI 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENN YAMGTSV R++ + +RG ++ I G +VDGM++ AVK ++AVA+CR+ KGP Sbjct: 183 ENNGYAMGTSVVRSTKSPSLWERGAAYGIKGEEVDGMNVLAVKEAGERAVAHCRSGKGPY 242 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 I+E+ TYRYRGHSMSDPA YRTR+E+ +MR DPIEQVR LL K A++ DLK I+ Sbjct: 243 ILEVKTYRYRGHSMSDPAKYRTRDEVQKMRDERDPIEQVRDMLLTGKHATDDDLKAIDKE 302 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 ++ I+N++ EF++ EP EL++DI Sbjct: 303 IKAIVNDAAEFSKESPEPHLDELWTDI 329 >gi|46202886|ref|ZP_00208699.1| COG1071: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Magnetospirillum magnetotacticum MS-1] Length = 332 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 182/320 (56%), Positives = 239/320 (74%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E ++ + YR MLLIRRFEEKAGQLYGMG++ GFCHL IGQEAV+VGM+ D Sbjct: 11 AEPTPQELIRYYREMLLIRRFEEKAGQLYGMGLINGFCHLYIGQEAVVVGMQAVAGAADS 70 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 IT+YR+HGH+L CG+D +MAELTGR GG S+GKGGSMHMFS + FYGGHGIVGAQV Sbjct: 71 CITSYRDHGHMLVCGMDPKGVMAELTGRAGGYSRGKGGSMHMFSREKRFYGGHGIVGAQV 130 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LGTG+ FA+KY + + + V GDGA NQGQVYE+FN+A+LW L V++VIENN+YAMGT Sbjct: 131 PLGTGLGFAHKYSKDNGVAHVYCGDGAVNQGQVYEAFNMASLWKLPVVFVIENNKYAMGT 190 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S R +A RG ++ IPG V+GM + AV+ +A+ + R+ +GP I+EM TYRY Sbjct: 191 STIRHAAGQELYMRGAAYGIPGEPVNGMSVIAVREAAARALEHARSGQGPYILEMNTYRY 250 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR++EE+ +MR HDPI+Q++++LL + E LKEI+ V+ I+ + Sbjct: 251 RGHSMSDPAKYRSKEEVTKMREQHDPIDQLKEKLLADGLIDEAGLKEIDREVKVIVTEAA 310 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+QS EPDP+EL++D+LI Sbjct: 311 EFSQSSPEPDPSELWTDVLI 330 >gi|68171461|ref|ZP_00544848.1| Pyruvate dehydrogenase (lipoamide) [Ehrlichia chaffeensis str. Sapulpa] gi|88657641|ref|YP_507043.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Ehrlichia chaffeensis str. Arkansas] gi|67999122|gb|EAM85785.1| Pyruvate dehydrogenase (lipoamide) [Ehrlichia chaffeensis str. Sapulpa] gi|88599098|gb|ABD44567.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Ehrlichia chaffeensis str. Arkansas] Length = 327 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 179/316 (56%), Positives = 238/316 (75%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 EQ ++ Y MLL+RRFEEK+GQLYGMG++GGFCHL IGQEA+ G++ ++ +GD +I Sbjct: 9 LTNEQLVNCYYSMLLMRRFEEKSGQLYGMGLIGGFCHLYIGQEAIATGIQNAIIDGDSII 68 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HG +L+ G D +MAEL G+ G SKGKGGSMHMF+ + F+GGHGIVGAQV + Sbjct: 69 TSYRDHGFMLSVGTDPKYVMAELMGKSTGCSKGKGGSMHMFNIEKHFFGGHGIVGAQVPI 128 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTGIA ANKY++++ + VC GDGA NQGQVYESFN+AALW L VIYVIENN+YAMGTSV Sbjct: 129 GTGIALANKYKKNNNVVFVCLGDGAVNQGQVYESFNMAALWKLPVIYVIENNEYAMGTSV 188 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 SR+S T+ K+G SF +PG QVDGMD+ +V AV YCRA+ GPI++EM TYRYRG Sbjct: 189 SRSSYITDLYKKGESFGVPGHQVDGMDLFSVTQAATDAVNYCRANNGPILLEMKTYRYRG 248 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR+++E+ E++ + DPI ++ L+ N S+ + + + +R I+ SV+F Sbjct: 249 HSMSDPAKYRSKQEVEEIKEHKDPITNLKNYLISNNIISDDECNKYDKEIRNIVKESVDF 308 Query: 347 AQSDKEPDPAELYSDI 362 +Q+ EPD LY+DI Sbjct: 309 SQNSSEPDAKMLYTDI 324 >gi|58040714|ref|YP_192678.1| pyruvate dehydrogenase E1 component alpha subunit [Gluconobacter oxydans 621H] gi|58003128|gb|AAW62022.1| Pyruvate dehydrogenase E1 component alpha subunit [Gluconobacter oxydans 621H] Length = 334 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 185/310 (59%), Positives = 237/310 (76%), Gaps = 1/310 (0%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 AYR MLL+RRFEEKAGQLYGMG++GGFCHL IGQEAV+VG+ +++ +GD+ IT+YR+HG Sbjct: 24 AYRDMLLVRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGIGLNMKQGDKSITSYRDHGQ 83 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +L G+ +MAELTGR GG S GKGGSMHMFS + FYGGHGIVGAQV+LGTG+AFAN Sbjct: 84 MLVAGMTPRGVMAELTGRSGGYSHGKGGSMHMFSREKEFYGGHGIVGAQVALGTGLAFAN 143 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KYR +D++ +V FG+GA+ QGQVYESFN+AAL L IYVIENN+Y MGTS+ RASA + Sbjct: 144 KYRGTDEVSIVYFGEGASAQGQVYESFNLAALHKLPCIYVIENNRYGMGTSIERASASKD 203 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S+ G + I +VDGMDI AV +A+ YCR+ KGP ++EM TYRYRGHSMSDPA Sbjct: 204 LSRNGEPWGIASRKVDGMDIFAVHEAAQEAMEYCRSGKGPFLLEMETYRYRGHSMSDPAK 263 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR R E+ EMR DPIE ++ +L + E K+IE +V+ I+ ++ EFAQ+ EPD Sbjct: 264 YRQRAEVEEMRRTRDPIETLKAEMLRSG-IEESVFKDIETDVKAIVADATEFAQTSPEPD 322 Query: 355 PAELYSDILI 364 +EL++DIL+ Sbjct: 323 VSELWTDILV 332 >gi|294677242|ref|YP_003577857.1| pyruvate dehydrogenase complex E1 component pyruvate dehydrogenase (acetyl-transferring) subunit alpha [Rhodobacter capsulatus SB 1003] gi|294476062|gb|ADE85450.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (acetyl-transferring), alpha subunit [Rhodobacter capsulatus SB 1003] Length = 334 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 193/315 (61%), Positives = 247/315 (78%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +KE+ L+ YR ML+IRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + GD+ IT Sbjct: 18 SKEELLTYYRDMLMIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAATKPGDKRIT 77 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+HGH+LACG+D +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQV LG Sbjct: 78 SYRDHGHMLACGMDPKGVMAELTGREGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVPLG 137 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+AFA+KY +D + FGDGAANQGQVYE+FN+AALW L VI+VIENNQYAMGT+ Sbjct: 138 AGLAFADKYLGNDNVTFAYFGDGAANQGQVYETFNMAALWKLPVIFVIENNQYAMGTAQK 197 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R+++ + RG +F IPG VDGMD+ AVKA +KAVA+CR+ GP I+E+ TYRYRGH Sbjct: 198 RSTSTPDIYMRGEAFGIPGEIVDGMDVLAVKAASEKAVAHCRSGAGPYILEVKTYRYRGH 257 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YRTREE+ +MR D IE VR+ L+ + A++ DLK I+ ++ I+N + EF+ Sbjct: 258 SMSDPAKYRTREEVQKMRDERDAIENVRELLISSGQATDEDLKAIDREIKAIVNEAAEFS 317 Query: 348 QSDKEPDPAELYSDI 362 + EP EL++DI Sbjct: 318 KESPEPALTELWTDI 332 >gi|89069560|ref|ZP_01156904.1| Pyruvate dehydrogenase E1 component, alpha subunit [Oceanicola granulosus HTCC2516] gi|89044895|gb|EAR50985.1| Pyruvate dehydrogenase E1 component, alpha subunit [Oceanicola granulosus HTCC2516] Length = 338 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 192/313 (61%), Positives = 242/313 (77%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E+ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ +T+Y Sbjct: 15 EELLHYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAADEGDKRVTSY 74 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+HGH+LACG+D +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIV AQV +G G Sbjct: 75 RDHGHMLACGMDPKGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVAAQVPIGAG 134 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +A A+KY +D++ FGDGAANQGQVYE++N+A LW+L V++VIENNQYAMGTSV R+ Sbjct: 135 LALADKYLGNDRVTFTYFGDGAANQGQVYETYNMAQLWDLPVVFVIENNQYAMGTSVKRS 194 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + +RG ++ I G +VDGMD+ AVKA +KAV +CRA GP I+E+ TYRYRGHSM Sbjct: 195 TKSPSLWERGAAYGIKGEEVDGMDVLAVKAAGEKAVEHCRAGDGPYILEVKTYRYRGHSM 254 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA YRTREE+ +MR DPIE VR LL K ASE DLK I+ V+ +N + EF++ Sbjct: 255 SDPAKYRTREEVQKMRDERDPIESVRTMLLDGKHASEDDLKSIDKEVKDQVNEAAEFSKE 314 Query: 350 DKEPDPAELYSDI 362 EP EL++DI Sbjct: 315 SPEPAMEELWTDI 327 >gi|254464562|ref|ZP_05077973.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacterales bacterium Y4I] gi|206685470|gb|EDZ45952.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacterales bacterium Y4I] Length = 337 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 191/307 (62%), Positives = 242/307 (78%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLLIRRFEEK+GQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT+YR+HGH+ Sbjct: 21 YREMLLIRRFEEKSGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDKRITSYRDHGHM 80 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LACG+D +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV +G G+AFA+K Sbjct: 81 LACGMDPDGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVGAQVPIGAGLAFADK 140 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y+ + ++ FGDGAANQGQVYE+FN+AALW L VI+VIENNQYAMGTS R+++ Sbjct: 141 YKGNGRVTFTYFGDGAANQGQVYETFNMAALWKLPVIFVIENNQYAMGTSQQRSTSSAEI 200 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 +RG +F IPG VDGM++ +VK ++AVA+CR+ GP I+E+ TYRYRGHSMSDPA Y Sbjct: 201 WERGKAFGIPGEAVDGMNVLSVKEAGERAVAHCRSGDGPYILEVKTYRYRGHSMSDPAKY 260 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREE+ +MR DPIEQVR LL K A+E DLK I+ ++ I++ S +FA+ EP Sbjct: 261 RTREEVQKMREERDPIEQVRDMLLTGKHATEEDLKAIDKEIKDIVSKSADFAKESPEPAL 320 Query: 356 AELYSDI 362 EL++DI Sbjct: 321 DELWTDI 327 >gi|73667399|ref|YP_303415.1| pyruvate dehydrogenase (lipoamide) [Ehrlichia canis str. Jake] gi|72394540|gb|AAZ68817.1| Pyruvate dehydrogenase (lipoamide) [Ehrlichia canis str. Jake] Length = 327 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 179/318 (56%), Positives = 237/318 (74%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + EQ ++ Y MLL+RRFEEK+GQLYGMG++GGFCHL IGQEA+ G++ ++TEGD Sbjct: 7 NNLTNEQLVNCYYSMLLMRRFEEKSGQLYGMGLIGGFCHLYIGQEAIAAGIQNAITEGDA 66 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT+YR+HG +L+ G D +MAEL G+ G SKGKGGSMHMF+ + F+GGHGIV AQV Sbjct: 67 IITSYRDHGFMLSVGTDPKYVMAELMGKSTGCSKGKGGSMHMFNIEKNFFGGHGIVAAQV 126 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +GTGIA ANKY++++ I CFGDGA NQGQVYE+FNIAALW L VIYVIENN+YAMGT Sbjct: 127 PIGTGIALANKYKKNNNIVFTCFGDGAVNQGQVYEAFNIAALWKLPVIYVIENNEYAMGT 186 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SVSR+S T+ K+G SF IPG QVDGM++ AV A YCR++ GPI++EM TYRY Sbjct: 187 SVSRSSYITDLYKKGESFGIPGHQVDGMNLFAVTQAAIDAATYCRSNNGPILLEMKTYRY 246 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR+++E+ ++ N DPI ++ L+ N S+ + + + +R I+ +V Sbjct: 247 RGHSMSDPAKYRSKQEVEGIKENKDPITHLKNHLISNNIVSDEECNKYDKEIRNIVKEAV 306 Query: 345 EFAQSDKEPDPAELYSDI 362 +F+Q+ EPD LY+DI Sbjct: 307 DFSQNSSEPDINTLYTDI 324 >gi|114766441|ref|ZP_01445406.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Pelagibaca bermudensis HTCC2601] gi|114541298|gb|EAU44347.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseovarius sp. HTCC2601] Length = 340 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 191/307 (62%), Positives = 238/307 (77%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ +T+YR+HGH+ Sbjct: 21 YRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDKRVTSYRDHGHM 80 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LACG+D + +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV LG G+AFA+ Sbjct: 81 LACGMDPNGVMAELTGREGGYSKGKGGSMHMFSREKHFYGGHGIVGAQVPLGAGLAFADN 140 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y + ++ FGDGAANQGQVYE+FN+A++W L V++VIENNQYAMGT+ R+++ + Sbjct: 141 YLENGRVTFTYFGDGAANQGQVYETFNMASIWKLPVVFVIENNQYAMGTAQKRSTSGEDI 200 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 RG F IPG VDGMD+ VK +KAV +CRA KGP I+E+ TYRYRGHSMSDPA Y Sbjct: 201 YTRGAPFGIPGELVDGMDVLKVKEAGEKAVEHCRAGKGPYILEIKTYRYRGHSMSDPAKY 260 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREE+ +MR DPI+ VR LL K ASE DLK I+ ++ I+N S EFA+ EP Sbjct: 261 RTREEVQKMREERDPIQNVRDLLLQGKHASEDDLKAIDKEIKDIVNASAEFAKESPEPAL 320 Query: 356 AELYSDI 362 EL++DI Sbjct: 321 EELWTDI 327 >gi|163746654|ref|ZP_02154011.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Oceanibulbus indolifex HEL-45] gi|161379768|gb|EDQ04180.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Oceanibulbus indolifex HEL-45] Length = 335 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 195/313 (62%), Positives = 240/313 (76%), Gaps = 1/313 (0%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E+ S YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT+Y Sbjct: 15 EELTSYYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDKRITSY 74 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+HGH+LACG+D + +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIV AQV LG G Sbjct: 75 RDHGHMLACGMDPNGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVAAQVPLGAG 134 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +AFA++Y+ + ++ FGDGAANQGQVYE+FN+AALW L VI+VIENNQYAMGTS R+ Sbjct: 135 LAFADQYKDNGRVTFTYFGDGAANQGQVYETFNMAALWKLPVIFVIENNQYAMGTSQQRS 194 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 ++ +RG +F IPG VDGMD+ AVK KAVA+ R GP I+E+ TYRYRGHSM Sbjct: 195 TSSAEIWERGKAFGIPGEAVDGMDVLAVKEAGQKAVAHAR-KDGPYILEIKTYRYRGHSM 253 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA YRTREE+ +MR DPIE VR LL A+E DLK I+ ++KI+N EFA+ Sbjct: 254 SDPAKYRTREEVQKMRDERDPIESVRTLLLEGNHATEDDLKAIDKEIKKIVNEGAEFAKE 313 Query: 350 DKEPDPAELYSDI 362 EP EL++DI Sbjct: 314 SPEPALDELWTDI 326 >gi|260427198|ref|ZP_05781177.1| pyruvate dehydrogenase E1 component, alpha subunit [Citreicella sp. SE45] gi|260421690|gb|EEX14941.1| pyruvate dehydrogenase E1 component, alpha subunit [Citreicella sp. SE45] Length = 340 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 194/307 (63%), Positives = 238/307 (77%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT+YR+HGH+ Sbjct: 21 YRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDKRITSYRDHGHM 80 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LACG+D + +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV LG G+AFA+ Sbjct: 81 LACGMDPNGVMAELTGREGGYSKGKGGSMHMFSREKHFYGGHGIVGAQVPLGAGLAFADN 140 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y + ++ FGDGAANQGQVYE+FN+AALW L V++VIENNQYAMGTS R+++ + Sbjct: 141 YLENKRVTFTYFGDGAANQGQVYETFNMAALWKLPVVFVIENNQYAMGTSQKRSTSTDDI 200 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 RG F I G VDGMD+ AVK +KAVA+CRA KGP I+E+ TYRYRGHSMSDPA Y Sbjct: 201 HTRGAPFGIQGEIVDGMDVLAVKEAGEKAVAHCRAGKGPYILEIKTYRYRGHSMSDPAKY 260 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREE+ +MR D I+ VR LL K A+E DLK I+ ++ I+N S EFA+ EP Sbjct: 261 RTREEVQKMREERDCIQNVRDLLLQGKHATEDDLKAIDKEIKDIVNASAEFAKESPEPAL 320 Query: 356 AELYSDI 362 EL++DI Sbjct: 321 DELWTDI 327 >gi|114768960|ref|ZP_01446586.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [alpha proteobacterium HTCC2255] gi|114549877|gb|EAU52758.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [alpha proteobacterium HTCC2255] Length = 329 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 186/309 (60%), Positives = 239/309 (77%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VG++ + EGD +T+YR+H H+ Sbjct: 21 YREMLLIRRFEEKAGQLYGMGHIGGFCHLYIGQEAVVVGLEAAAKEGDSRLTSYRDHAHM 80 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LACG+D +MAELTGR+ G+SKGKGGSMHMFS + FYGGHGIV AQV +G G+A ANK Sbjct: 81 LACGLDPKGVMAELTGRKDGLSKGKGGSMHMFSKEKKFYGGHGIVAAQVPIGAGLALANK 140 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 YR D + FGDGAANQGQVYESFN+AALW L VI+V+ENN+YAMGTS+ RA++ +F Sbjct: 141 YRGEDTVTFTYFGDGAANQGQVYESFNMAALWKLPVIFVVENNRYAMGTSLQRAASTPDF 200 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 RG +F I G VDGMD+ AVKA + AV +CRA GP ++E+ TYRYRGHSMSDPA Y Sbjct: 201 YTRGEAFGIAGAVVDGMDVLAVKAAGELAVEHCRAGNGPFVLEVKTYRYRGHSMSDPARY 260 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R++EE+ ++ N DPI+ V++ L+ +++ DLK I+ +++KI+ S +FA + EPD Sbjct: 261 RSKEEVKNVKDNQDPIDMVKEMLIQGGHSTQDDLKIIDKDIKKIVQESADFAIASPEPDL 320 Query: 356 AELYSDILI 364 ELY+DIL+ Sbjct: 321 NELYTDILV 329 >gi|57239478|ref|YP_180614.1| pyruvate dehydrogenase E1 component, alpha subunit [Ehrlichia ruminantium str. Welgevonden] gi|58617510|ref|YP_196709.1| pyruvate dehydrogenase E1 component, alpha subunit [Ehrlichia ruminantium str. Gardel] gi|57161557|emb|CAH58484.1| pyruvate dehydrogenase E1 component, alpha subunit [Ehrlichia ruminantium str. Welgevonden] gi|58417122|emb|CAI28235.1| Pyruvate dehydrogenase E1 component, alpha subunit [Ehrlichia ruminantium str. Gardel] Length = 329 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 180/319 (56%), Positives = 237/319 (74%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + K+Q ++ Y MLLIRRFEEK+GQLYGMG++GGFCHL IGQEA+ VG++ S+ EGD Sbjct: 6 IHNLTKQQLINCYHDMLLIRRFEEKSGQLYGMGLIGGFCHLYIGQEAIAVGIQHSIIEGD 65 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +IT+YR+HG +L+ G D +MAEL G+ G S GKGGSMHMF+ + F+GGHGIVGAQ Sbjct: 66 SIITSYRDHGFMLSSGTDPKYVMAELMGKSTGCSGGKGGSMHMFNIEKQFFGGHGIVGAQ 125 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V +GTGIA ANKY++++ + CFGDGA NQGQVYE+FN+AALW L V+YVIENN+YAMG Sbjct: 126 VPIGTGIALANKYKKNNNVVFTCFGDGATNQGQVYEAFNMAALWKLPVVYVIENNEYAMG 185 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSVSR+S T+ K+G SF IPG Q+DGMD+ AV A AYCR GPI++EM TYR Sbjct: 186 TSVSRSSYITDLYKKGESFGIPGYQIDGMDLFAVIKAATDAAAYCREQNGPILLEMKTYR 245 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR++EE+ +++ DP+ ++ ++ NK SE D + + +R I+ S Sbjct: 246 YRGHSMSDPAKYRSKEEVEKVKEEKDPLINLKNYMISNKIISEEDCNKYDKEIRNIVKES 305 Query: 344 VEFAQSDKEPDPAELYSDI 362 VEF+Q+ EP LY+D+ Sbjct: 306 VEFSQNSSEPAVNTLYTDV 324 >gi|56552502|ref|YP_163341.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Zymomonas mobilis subsp. mobilis ZM4] gi|260753835|ref|YP_003226728.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|8474180|sp|O66112|ODPA_ZYMMO RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|2982635|emb|CAA73384.1| pyruvate dehydrogenase alpha2 subunit [Zymomonas mobilis] gi|56544076|gb|AAV90230.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Zymomonas mobilis subsp. mobilis ZM4] gi|258553198|gb|ACV76144.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 354 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 184/337 (54%), Positives = 245/337 (72%), Gaps = 4/337 (1%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 S++ D+P + G ++E+ L YR ML+IRRFEE+ GQLYG+G++ GFCHL IGQ Sbjct: 18 SAIPNHDLPPIPG--RYHADREELLEFYRRMLMIRRFEERCGQLYGLGLIAGFCHLYIGQ 75 Query: 89 EAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMF 147 EAV VG++ +L G D +IT YREHGH+LA G+D +MAELTGR GIS GKGGSMHMF Sbjct: 76 EAVAVGLQAALQPGRDSVITGYREHGHMLAYGIDPKIVMAELTGRASGISHGKGGSMHMF 135 Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 ST++ F+GG+GIVGAQV LG G+AFA+KYR FGDG+ANQGQVYE++N+AALW Sbjct: 136 STEHKFFGGNGIVGAQVPLGAGLAFAHKYRNDGGCSAAYFGDGSANQGQVYEAYNMAALW 195 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 L VI+VIENN YAMGTS+ RA+A T S+RG F IP + VDGMD+ V+ AV + Sbjct: 196 KLPVIFVIENNGYAMGTSIQRANAHTALSERGAGFGIPALVVDGMDVLEVRGAATVAVDW 255 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 +A KGPII+EM TYRYRGHSMSDPA YR+REE+N+M+ NHDP++ ++K L E Sbjct: 256 VQAGKGPIILEMKTYRYRGHSMSDPARYRSREEVNDMKENHDPLDNLKKDLF-AAGVPEA 314 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 +L +++ ++R+ + + +FA+ P ELY++IL+ Sbjct: 315 ELVKLDEDIRQQVKEAADFAEKAPLPADEELYTNILV 351 >gi|241762255|ref|ZP_04760337.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373302|gb|EER62921.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 354 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 184/337 (54%), Positives = 245/337 (72%), Gaps = 4/337 (1%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 S++ D+P + G ++E+ L YR ML+IRRFEE+ GQLYG+G++ GFCHL IGQ Sbjct: 18 SAIPNHDLPPIPG--RYHADREELLEFYRRMLMIRRFEERCGQLYGLGLIAGFCHLYIGQ 75 Query: 89 EAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMF 147 EAV VG++ +L G D +IT YREHGH+LA G+D +MAELTGR GIS GKGGSMHMF Sbjct: 76 EAVAVGLQAALQPGRDSVITGYREHGHMLAYGIDPKIVMAELTGRASGISHGKGGSMHMF 135 Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 ST++ F+GG+GIVGAQV LG G+AFA+KYR FGDG+ANQGQVYE++N+AALW Sbjct: 136 STEHKFFGGNGIVGAQVPLGAGLAFAHKYRNDGGCSAAYFGDGSANQGQVYEAYNMAALW 195 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 L VI+VIENN YAMGTS+ RA+A T S+RG F IP + VDGMD+ V+ AV + Sbjct: 196 KLPVIFVIENNGYAMGTSIQRANAHTALSERGAGFGIPALVVDGMDVLEVRGAATVAVDW 255 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 +A KGPII+EM TYRYRGHSMSDPA YR+REE+N+M+ NHDP++ ++K L E Sbjct: 256 VQAGKGPIILEMKTYRYRGHSMSDPARYRSREEVNDMKENHDPLDNLKKDLF-AAGVPEV 314 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 +L +++ ++R+ + + +FA+ P ELY++IL+ Sbjct: 315 ELVKLDEDIRQQVKEAADFAEKAPLPADEELYTNILV 351 >gi|167646722|ref|YP_001684385.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Caulobacter sp. K31] gi|167349152|gb|ABZ71887.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Caulobacter sp. K31] Length = 343 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 188/316 (59%), Positives = 243/316 (76%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K++ L Y+ MLLIRRFEE+AGQLYGMG++GGFCHL IGQEA+ VGM+ +GDQ+IT Sbjct: 25 KDELLKFYQDMLLIRRFEERAGQLYGMGLIGGFCHLYIGQEAIAVGMQSIKVKGDQIITG 84 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HGH+LA G+D ++MAELTGR GG S GKGGSMHMF + GFYGGHGIVGAQVSLGT Sbjct: 85 YRDHGHMLAAGMDPREVMAELTGRAGGSSHGKGGSMHMFDVETGFYGGHGIVGAQVSLGT 144 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A N YR + + FGDGAANQGQVYESFN+A LW L V+YVIENNQYAMGTSV R Sbjct: 145 GLALNNHYRGNGNVAFAYFGDGAANQGQVYESFNMAQLWKLPVVYVIENNQYAMGTSVER 204 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++++T F KRG SF IPG +VDGMD+ AV +A + R+ +GP I+EM TYRYRGHS Sbjct: 205 SASETAFHKRGTSFRIPGEEVDGMDVTAVAEAGARAAEHARSGQGPFILEMKTYRYRGHS 264 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YRT++E++ ++ DPI+ +++RL +E DLK ++ V++I+ + EFA+ Sbjct: 265 MSDPAKYRTKDEVDNVKQTRDPIDHLKERLA-KVGVAEDDLKVVDAEVKRIVAEAAEFAR 323 Query: 349 SDKEPDPAELYSDILI 364 + EPDP+ELY+D+ + Sbjct: 324 TSPEPDPSELYTDVYL 339 >gi|3089612|gb|AAC70361.1| pyruvate dehydrogenase alpha subunit [Zymomonas mobilis subsp. mobilis ZM4] Length = 353 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 183/337 (54%), Positives = 244/337 (72%), Gaps = 5/337 (1%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 S++ D+P + G ++E+ L YR ML+IRRFEE+ GQLYG+G++ GF HL IGQ Sbjct: 18 SAIPNHDLPPIPG--RYHADREELLEFYRRMLMIRRFEERCGQLYGLGLIAGFNHLYIGQ 75 Query: 89 EAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMF 147 EAV VG++ +L G D +IT YREHGH+LA G+D +MAELTGR GIS GKGGSMHMF Sbjct: 76 EAVAVGLQAALQPGRDSVITGYREHGHMLAYGIDPKIVMAELTGRASGISHGKGGSMHMF 135 Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 ST++ F+GG+GIVGAQV LG G+AFA+KYR FGDG+ANQGQVYE++N+AALW Sbjct: 136 STEHKFFGGNGIVGAQVPLGAGLAFAHKYRNDGGCSAAYFGDGSANQGQVYEAYNMAALW 195 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 L VI+VIENN YAMGTS+ RA+A T S+RG F IP + VDGMD+ V+ AV + Sbjct: 196 KLPVIFVIENNGYAMGTSIQRANAHTALSERGAGFGIPALVVDGMDVLEVRGAATVAVDW 255 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 +A KGPII+EM TYRYRGHSMSDPA YR+REE+N+M+ NHDP++ ++K L E Sbjct: 256 VQAGKGPIILEMKTYRYRGHSMSDPARYRSREEVNDMKENHDPLDNLKKDLFAG--VPEA 313 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 +L +++ ++R+ + + +FA+ P ELY++IL+ Sbjct: 314 ELVKLDEDIRQQVKEAADFAEKAPLPADEELYTNILV 350 >gi|222474803|ref|YP_002563218.1| pyruvate dehydrogenase E1 component, alpha subunit precursor (pdhA) [Anaplasma marginale str. Florida] gi|222418939|gb|ACM48962.1| pyruvate dehydrogenase E1 component, alpha subunit precursor (pdhA) [Anaplasma marginale str. Florida] Length = 372 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 176/318 (55%), Positives = 232/318 (72%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S + EQ + +Y MLL+RRFEEK GQLYGMG++ GFCHL IGQEA+ VG++ L+ D Sbjct: 53 SAISDEQVVKSYHDMLLMRRFEEKVGQLYGMGLIRGFCHLYIGQEAIAVGLQNVLSSEDS 112 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 ++T+YREHG +L G A+ I+AEL G++ G SKGKGGSMHMF+ F+GGHGIVGAQV Sbjct: 113 IVTSYREHGFMLTSGESANTILAELMGKRTGCSKGKGGSMHMFNVAKNFFGGHGIVGAQV 172 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +GTGIAFA +Y++ + C GDGA NQGQVYESFN+A+LW L V+YV+ENN+YAMGT Sbjct: 173 PIGTGIAFAEQYKKGRGVVFTCLGDGAMNQGQVYESFNMASLWKLPVVYVVENNEYAMGT 232 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R+S+ +RG +PG QVDGMDI AV A CR GP+++EM TYR+ Sbjct: 233 SVPRSSSVVELYRRGEGCGVPGSQVDGMDIFAVIEAASNAAELCRNGNGPVLLEMKTYRF 292 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTR+E++E+R + DP+ ++++ +L +K A E L E VR+I+N +V Sbjct: 293 RGHSMSDPAKYRTRQEVDEVRDSRDPLCRLKEYVLKHKIAPESTLDGFEKQVREIVNGAV 352 Query: 345 EFAQSDKEPDPAELYSDI 362 EFAQS EP+ ELY+D+ Sbjct: 353 EFAQSSPEPEAGELYTDV 370 >gi|56416433|ref|YP_153507.1| pyruvate dehydrogenase E1 component, alpha subunit precursor [Anaplasma marginale str. St. Maries] gi|254994666|ref|ZP_05276856.1| pyruvate dehydrogenase E1 component, alpha subunit precursor [Anaplasma marginale str. Mississippi] gi|269959151|ref|YP_003328940.1| pyruvate dehydrogenase E1 component alpha subunit [Anaplasma centrale str. Israel] gi|56387665|gb|AAV86252.1| pyruvate dehydrogenase E1 component, alpha subunit precursor [Anaplasma marginale str. St. Maries] gi|269848982|gb|ACZ49626.1| pyruvate dehydrogenase E1 component alpha subunit [Anaplasma centrale str. Israel] Length = 372 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 176/318 (55%), Positives = 231/318 (72%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S + EQ + +Y MLL+RRFEEK GQLYGMG++ GFCHL IGQEA+ VG++ L+ D Sbjct: 53 SAISDEQVVKSYHDMLLMRRFEEKVGQLYGMGLIRGFCHLYIGQEAIAVGLQNVLSSEDS 112 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 ++T+YREHG +L G A+ I+AEL G+ G SKGKGGSMHMF+ F+GGHGIVGAQV Sbjct: 113 IVTSYREHGFMLTSGESANTILAELMGKGTGCSKGKGGSMHMFNVAKNFFGGHGIVGAQV 172 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +GTGIAFA +Y++ + C GDGA NQGQVYESFN+A+LW L V+YV+ENN+YAMGT Sbjct: 173 PIGTGIAFAEQYKKGKGVVFTCLGDGAMNQGQVYESFNMASLWKLPVVYVVENNEYAMGT 232 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R+S+ +RG +PG QVDGMDI AV A CR GP+++EM TYR+ Sbjct: 233 SVPRSSSVVELYRRGEGCGVPGSQVDGMDIFAVIEAASNAAELCRNGNGPVLLEMKTYRF 292 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTR+E++E+R + DP+ ++++ +L +K A E L E VR+I+N +V Sbjct: 293 RGHSMSDPAKYRTRQEVDEVRDSRDPLCRLKEYVLKHKIAPESTLDGFEKQVREIVNGAV 352 Query: 345 EFAQSDKEPDPAELYSDI 362 EFAQS EP+ ELY+D+ Sbjct: 353 EFAQSSPEPEAGELYTDV 370 >gi|255002773|ref|ZP_05277737.1| pyruvate dehydrogenase E1 component, alpha subunit precursor [Anaplasma marginale str. Puerto Rico] Length = 372 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 176/318 (55%), Positives = 231/318 (72%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S + EQ + +Y MLL+RRFEEK GQLYGMG++ GFCHL IGQEA+ VG++ L+ D Sbjct: 53 SAISDEQVVKSYHDMLLMRRFEEKVGQLYGMGLIRGFCHLYIGQEAIAVGLQNVLSSEDS 112 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 ++T+YREHG +L G A+ I+AEL G+ G SKGKGGSMHMF+ F+GGHGIVGAQV Sbjct: 113 IVTSYREHGFMLTSGESANTILAELMGKGTGCSKGKGGSMHMFNVAKNFFGGHGIVGAQV 172 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +GTGIAFA +Y++ + C GDGA NQGQVYESFN+A+LW L V+YV+ENN+YAMGT Sbjct: 173 PIGTGIAFAEQYKKGRGVVFTCLGDGAMNQGQVYESFNMASLWKLPVVYVVENNEYAMGT 232 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R+S+ +RG +PG QVDGMDI AV A CR GP+++EM TYR+ Sbjct: 233 SVPRSSSVVELYRRGEGCGVPGSQVDGMDIFAVIEAASNAAELCRNGNGPVLLEMKTYRF 292 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTR+E++E+R + DP+ ++++ +L +K A E L E VR+I+N +V Sbjct: 293 RGHSMSDPAKYRTRQEVDEVRDSRDPLCRLKEYVLKHKIAPESTLDGFEKQVREIVNGAV 352 Query: 345 EFAQSDKEPDPAELYSDI 362 EFAQS EP+ ELY+D+ Sbjct: 353 EFAQSSPEPEAGELYTDV 370 >gi|329889605|ref|ZP_08267948.1| pyruvate dehydrogenase acetyl-transferring E1 component, alpha subunit [Brevundimonas diminuta ATCC 11568] gi|328844906|gb|EGF94470.1| pyruvate dehydrogenase acetyl-transferring E1 component, alpha subunit [Brevundimonas diminuta ATCC 11568] Length = 342 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 195/318 (61%), Positives = 245/318 (77%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMI 106 +KE L YR M+LIRRFEE+AGQLYGMG++GGFCHL IGQEAV VG++ S+ +G D++I Sbjct: 24 SKEDLLRFYREMVLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVAVGVQESVKQGYDKII 83 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HGH+L G+D ++MAELTGR GG SKGKGGSMHMF GFYGGHGIVGAQV+L Sbjct: 84 TGYRDHGHMLVAGMDPKEVMAELTGRIGGSSKGKGGSMHMFDVPTGFYGGHGIVGAQVAL 143 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTG+AFA KYR D + V FGDGA+NQGQVYESFN+A LW L IY+IENNQYAMGTS+ Sbjct: 144 GTGLAFAGKYRGDDSVSFVYFGDGASNQGQVYESFNMAQLWKLPAIYIIENNQYAMGTSI 203 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+S+ T +RG SF IPG QVDGMD+ AV+ +AVA RA +GP I+E+ TYRYRG Sbjct: 204 ERSSSTTELYQRGASFGIPGEQVDGMDVLAVRDAAARAVARARAGEGPYILEVKTYRYRG 263 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRT+EE++E++ DPI+ + K LL A+E +LK I+ V+ I+ +V+F Sbjct: 264 HSMSDPAKYRTKEEVDEVKKTRDPIDHL-KMLLAAAKATEDELKAIDNEVKAIVAEAVQF 322 Query: 347 AQSDKEPDPAELYSDILI 364 AQ EPD +ELY+D+ + Sbjct: 323 AQESPEPDASELYTDVYV 340 >gi|88607434|ref|YP_504713.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Anaplasma phagocytophilum HZ] gi|88598497|gb|ABD43967.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Anaplasma phagocytophilum HZ] Length = 345 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 181/316 (57%), Positives = 225/316 (71%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E LSAY+ ML +RR EEK GQLYGMG++ GFCHL IGQEAV GM L D +I Sbjct: 28 LTNESVLSAYKHMLFMRRLEEKVGQLYGMGLIRGFCHLYIGQEAVAAGMYSVLQPSDSVI 87 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YREHG L+ G KI+AEL GR G SKGKGGSMH+F+ + FYGGHGIVGAQV + Sbjct: 88 TSYREHGFALSSGESPGKIIAELLGRSAGSSKGKGGSMHIFNVQKNFYGGHGIVGAQVPI 147 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTGIAFANKY+ + + C GDGA NQGQVYE+FN+AALW L V+YV+ENN+YAMGTSV Sbjct: 148 GTGIAFANKYKANGGVVFTCLGDGAINQGQVYEAFNMAALWKLPVVYVVENNEYAMGTSV 207 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +R+S ++ KRG S +PG +VDGMD+ V + +A A+CR GPI++EM TYRYRG Sbjct: 208 ARSSYVSDLYKRGESCGVPGRRVDGMDLFEVIREVSQAAAHCREGNGPILLEMKTYRYRG 267 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTREE+ E+R+N DP+ V+ +L + ASE L E +R I +VEF Sbjct: 268 HSMSDPAKYRTREEVEEIRNNRDPLCIVKSHILEHNMASEEVLTTWEKEIRDEIKKAVEF 327 Query: 347 AQSDKEPDPAELYSDI 362 A+ EP ELY+D+ Sbjct: 328 AEGCPEPSVEELYTDV 343 >gi|91205074|ref|YP_537429.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia bellii RML369-C] gi|157827590|ref|YP_001496654.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia bellii OSU 85-389] gi|122425977|sp|Q1RJX4|ODPA_RICBR RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|91068618|gb|ABE04340.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia bellii RML369-C] gi|157802894|gb|ABV79617.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia bellii OSU 85-389] Length = 326 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 171/316 (54%), Positives = 230/316 (72%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M + D M+T+ Sbjct: 12 KEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDMVKQKEDSMVTS 71 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+H HI+ G + ++AEL GR G SKGKGGSMH+F N FYGGHGIVGAQV +GT Sbjct: 72 YRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDVPNKFYGGHGIVGAQVPIGT 131 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+AFA KY ++ IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+R Sbjct: 132 GLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVAR 191 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++ + K+G SF I G Q++GMD + + +A Y R + P+I+E+ TYRYRGHS Sbjct: 192 STFMRDLYKKGESFGIKGFQLNGMDFEEMYDGVKQAAEYVRENSMPLILEVKTYRYRGHS 251 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YR++EE+ E DPI ++RK +L N +ASE DLKEIE +V++I+ +VEF++ Sbjct: 252 MSDPAKYRSKEEV-ETYKERDPITEIRKIILENNYASEADLKEIEQSVKEIVKEAVEFSE 310 Query: 349 SDKEPDPAELYSDILI 364 + P+ ELY+ I + Sbjct: 311 NSPLPNEEELYTQIYV 326 >gi|58579456|ref|YP_197668.1| pyruvate dehydrogenase E1 component, alpha subunit [Ehrlichia ruminantium str. Welgevonden] gi|58418082|emb|CAI27286.1| Pyruvate dehydrogenase E1 component, alpha subunit [Ehrlichia ruminantium str. Welgevonden] Length = 328 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 177/320 (55%), Positives = 234/320 (73%), Gaps = 1/320 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + K+Q ++ Y MLLIRRFEEK+GQLYGMG++GGFCHL IGQEA+ VG++ S+ EG Sbjct: 5 HIHNLTKQQLINCYHDMLLIRRFEEKSGQLYGMGLIGGFCHLYIGQEAIAVGIQHSIIEG 64 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D +IT+YR+HG + + +MAEL G+ G S GKGGSMHMF+ + F+GGHGIVGA Sbjct: 65 DSIITSYRDHG-LCFFWYRSKYVMAELMGKSTGCSGGKGGSMHMFNIEKQFFGGHGIVGA 123 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV +GTGIA ANKY++++ + CFGDGA NQGQVYE+FN+AALW L V+YVIENN+YAM Sbjct: 124 QVPIGTGIALANKYKKNNNVVFTCFGDGATNQGQVYEAFNMAALWKLPVVYVIENNEYAM 183 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSVSR+S T+ K+G SF IPG Q+DGMD+ AV A AYCR GPI++EM TY Sbjct: 184 GTSVSRSSYITDLYKKGESFGIPGYQIDGMDLFAVIKAATDAAAYCREQNGPILLEMKTY 243 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDPA YR++EE+ +++ DP+ ++ ++ NK SE D + + +R I+ Sbjct: 244 RYRGHSMSDPAKYRSKEEVEKVKEEKDPLINLKNYMISNKIISEEDCNKYDKEIRNIVKE 303 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SVEF+Q+ EP LY+D+ Sbjct: 304 SVEFSQNSSEPAVNTLYTDV 323 >gi|157964332|ref|YP_001499156.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia massiliae MTU5] gi|157844108|gb|ABV84609.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia massiliae MTU5] Length = 326 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 170/315 (53%), Positives = 226/315 (71%), Gaps = 1/315 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M +GD IT Sbjct: 11 TKEEYIKSFKNMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDMVKQKGDSTIT 70 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+H HI+ G + ++AEL GR G SKGKGGSMH+F N FYGGHGIVGAQV +G Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRVTGCSKGKGGSMHLFDVPNKFYGGHGIVGAQVPIG 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA KY + IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+ Sbjct: 131 TGLAFAEKYNDTHNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVA 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++ + K+G SF I G Q+DGMD + +A Y R + P+I+E+ TYRYRGH Sbjct: 191 RSTFMRDLYKKGASFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR +EE+ + + DP+ +RK +L NK+ +E DLKEIE +V++I+ +VEF+ Sbjct: 251 SMSDPAKYRNKEEVEQYKE-RDPLVIIRKTILDNKYVTEADLKEIEQSVKEIVKEAVEFS 309 Query: 348 QSDKEPDPAELYSDI 362 ++ PD ELY+ + Sbjct: 310 ENSPLPDEGELYTQV 324 >gi|157825476|ref|YP_001493196.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia akari str. Hartford] gi|157799434|gb|ABV74688.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia akari str. Hartford] Length = 326 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 170/316 (53%), Positives = 231/316 (73%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE+ L A++ +LL+RRFEEK GQLYG+G +GGFCHL IGQEA IV + M +GD MIT+ Sbjct: 12 KEEYLRAFKEVLLVRRFEEKCGQLYGVGEIGGFCHLYIGQEAGIVAVNMVRQKGDSMITS 71 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+H HI+ G + ++AEL GR G SKGKGGSMH+F FYGGHGIVGAQV +GT Sbjct: 72 YRDHAHIILAGTEPKDVLAELMGRATGCSKGKGGSMHLFDVPRKFYGGHGIVGAQVPIGT 131 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+AFA KY ++ IC GDGA NQGQVYE+ N+AALW L V+Y+IENN+Y+MGTSV+R Sbjct: 132 GLAFAEKYNGTNNICFTFLGDGAVNQGQVYEALNMAALWGLPVVYIIENNEYSMGTSVAR 191 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++ + K+G SF I G Q+DGMD + +A Y R + P+I+E+ TYRYRGHS Sbjct: 192 STFMCDLYKKGESFGIKGCQLDGMDFEEMYNGFKQAAEYVRENSFPLILEVKTYRYRGHS 251 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YR++EE+ + + DP+ +RK +L NK+A+E DLKEIE +V++I+ +VEF++ Sbjct: 252 MSDPAKYRSKEEVEKYKE-RDPLVIIRKTILDNKYATEADLKEIEQSVKEIVKEAVEFSE 310 Query: 349 SDKEPDPAELYSDILI 364 + PD +ELY+++ + Sbjct: 311 NSPLPDESELYTNVYV 326 >gi|67459412|ref|YP_247036.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia felis URRWXCal2] gi|75536172|sp|Q4UKQ6|ODPA_RICFE RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|67004945|gb|AAY61871.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia felis URRWXCal2] Length = 326 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 169/315 (53%), Positives = 229/315 (72%), Gaps = 1/315 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + +GD IT Sbjct: 11 TKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDTVKQKGDSTIT 70 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+H HI+ G + ++AEL GR G SKGKGGSMH+F N FYGGHGIVGAQV +G Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKFYGGHGIVGAQVPIG 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA KY ++ IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+ Sbjct: 131 TGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVA 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++ + K+G SF I G Q+DGMD + +A Y R + P+I+E+ TYRYRGH Sbjct: 191 RSTFMRDLYKKGESFGIKGFQLDGMDFEEMYNGAKQAAEYVRENSFPLILEVKTYRYRGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR++EE+ + + DP+ +RK +L NK+A+E DLKEIE +V++I+ +V+F+ Sbjct: 251 SMSDPAKYRSKEEVEQYKE-RDPLVIIRKTILDNKYATEADLKEIEQSVKEIVKEAVKFS 309 Query: 348 QSDKEPDPAELYSDI 362 ++ PD ELY+++ Sbjct: 310 ENSPLPDEGELYTEV 324 >gi|34580715|ref|ZP_00142195.1| pyruvate dehydrogenase e1 component alpha subunit precursor [Rickettsia sibirica 246] gi|238650486|ref|YP_002916338.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia peacockii str. Rustic] gi|28262100|gb|EAA25604.1| pyruvate dehydrogenase e1 component alpha subunit precursor [Rickettsia sibirica 246] gi|238624584|gb|ACR47290.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia peacockii str. Rustic] Length = 326 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 169/315 (53%), Positives = 227/315 (72%), Gaps = 1/315 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M +GD IT Sbjct: 11 TKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDMVKQKGDSTIT 70 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+H HI+ G + ++AEL GR G SKGKGGSMH+F+ N FYGGHGIVGAQV +G Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFNVPNKFYGGHGIVGAQVPIG 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA KY + IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+ Sbjct: 131 TGLAFAEKYNDTHNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVA 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++ + K+G SF I G Q+DGMD + +A Y R + P+I+E+ TYRYRGH Sbjct: 191 RSTFMRDLYKKGASFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR++EE+ + + DP+ +RK +L NK+ +E DLK IE +V++I+ +VEF+ Sbjct: 251 SMSDPAKYRSKEEVEQYK-ERDPLVIIRKTILDNKYVTEADLKAIEQSVKEIVKEAVEFS 309 Query: 348 QSDKEPDPAELYSDI 362 ++ PD ELY+ + Sbjct: 310 ENSPLPDEGELYTQV 324 >gi|239947786|ref|ZP_04699539.1| pyruvate dehydrogenase E1 component, alpha subunit [Rickettsia endosymbiont of Ixodes scapularis] gi|239922062|gb|EER22086.1| pyruvate dehydrogenase E1 component, alpha subunit [Rickettsia endosymbiont of Ixodes scapularis] Length = 329 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 171/315 (54%), Positives = 228/315 (72%), Gaps = 1/315 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ + + + MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M +GD IT Sbjct: 11 TKEEYMKSIKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDMVKQKGDSTIT 70 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+H HI+ G + ++AEL GR G SKGKGGSMH+F N FYGGHGIVGAQV +G Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDVPNKFYGGHGIVGAQVPIG 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA KY ++ IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+ Sbjct: 131 TGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVA 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 ++ + K+G SF I G Q+DGMD + +A Y R + P+I+E+ TYRYRGH Sbjct: 191 HSTFMRDLYKKGESFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR++EE+ + + DP+ +RK +L NK+A+E DLKEIE +V++I+ +VEF+ Sbjct: 251 SMSDPAKYRSKEEVEQYKER-DPLVIIRKTILDNKYATEADLKEIEQSVKEIVKEAVEFS 309 Query: 348 QSDKEPDPAELYSDI 362 ++ PD ELY++I Sbjct: 310 ENSPLPDERELYTNI 324 >gi|229586511|ref|YP_002845012.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia africae ESF-5] gi|228021561|gb|ACP53269.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia africae ESF-5] Length = 326 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 169/315 (53%), Positives = 227/315 (72%), Gaps = 1/315 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M +GD IT Sbjct: 11 TKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDMVKHKGDSTIT 70 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+H HI+ G + ++AEL GR G SKGKGGSMH+F+ N FYGGHGIVGAQV +G Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFNVPNKFYGGHGIVGAQVPIG 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA KY + IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+ Sbjct: 131 TGLAFAEKYNDTHNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVA 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++ + K+G SF I G Q+DGMD + +A Y R + P+I+E+ TYRYRGH Sbjct: 191 RSTFMRDLYKKGASFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR++EE+ + + DP+ +RK +L NK+ +E DLK IE +V++I+ +VEF+ Sbjct: 251 SMSDPAKYRSKEEVEQYKER-DPLVIIRKTILDNKYVTEADLKAIEQSVKEIVKEAVEFS 309 Query: 348 QSDKEPDPAELYSDI 362 ++ PD ELY+ + Sbjct: 310 ENSPLPDEGELYTQV 324 >gi|255003907|ref|ZP_05278708.1| pyruvate dehydrogenase E1 component, alpha subunit precursor (pdhA) [Anaplasma marginale str. Virginia] Length = 364 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 172/312 (55%), Positives = 227/312 (72%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S + EQ + +Y MLL+RRFEEK GQLYGMG++ GFCHL IGQEA+ VG++ L+ D Sbjct: 53 SAISDEQVVKSYHDMLLMRRFEEKVGQLYGMGLIRGFCHLYIGQEAIAVGLQNVLSSEDS 112 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 ++T+YREHG +L G A+ I+AEL G++ G SKGKGGSMHMF+ F+GGHGIVGAQV Sbjct: 113 IVTSYREHGFMLTSGESANTILAELMGKRTGCSKGKGGSMHMFNVAKNFFGGHGIVGAQV 172 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +GTGIAFA +Y++ + C GDGA NQGQVYESFN+A+LW L V+YV+ENN+YAMGT Sbjct: 173 PIGTGIAFAEQYKKGRGVVFTCLGDGAMNQGQVYESFNMASLWKLPVVYVVENNEYAMGT 232 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R+S+ +RG +PG QVDGMDI AV A CR GP+++EM TYR+ Sbjct: 233 SVPRSSSVVELYRRGEGCGVPGSQVDGMDIFAVIEAASNAAELCRNGNGPVLLEMKTYRF 292 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTR+E++E+R + DP+ ++++ +L +K A E L E VR+I+N +V Sbjct: 293 RGHSMSDPAKYRTRQEVDEVRDSKDPLCRLKEYVLKHKIAPESTLDGFEKQVREIVNGAV 352 Query: 345 EFAQSDKEPDPA 356 EFAQ+ EP+ A Sbjct: 353 EFAQNSPEPEVA 364 >gi|157828224|ref|YP_001494466.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932927|ref|YP_001649716.1| pyruvate dehydrogenase E1 component subunit alpha [Rickettsia rickettsii str. Iowa] gi|157800705|gb|ABV75958.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908014|gb|ABY72310.1| pyruvate dehydrogenase E1 component alpha subunit [Rickettsia rickettsii str. Iowa] Length = 326 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 168/315 (53%), Positives = 228/315 (72%), Gaps = 1/315 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M +GD IT Sbjct: 11 TKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDMVKQKGDSTIT 70 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+H HI+ G + ++AEL GR G SKGKGGSMH+F+ + FYGGHGIVGAQV +G Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFNVPHKFYGGHGIVGAQVPIG 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA KY + IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+ Sbjct: 131 TGLAFAEKYNDTHNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVA 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++ + K+G SF I G Q+DGMD + + +A Y R + P+I+E+ TYRYRGH Sbjct: 191 RSTFMRDLYKKGASFGIKGFQLDGMDFKEMYDGSKQAAEYVRENSFPLILEVKTYRYRGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR++EE+ + + DP+ +RK +L NK+ +E DLK IE +V++I+ +VEF+ Sbjct: 251 SMSDPAKYRSKEEVEQYKER-DPLVIIRKTILDNKYVTEADLKAIEQSVKEIVKEAVEFS 309 Query: 348 QSDKEPDPAELYSDI 362 ++ PD ELY+ + Sbjct: 310 ENSPLPDEGELYTQV 324 >gi|15892270|ref|NP_359984.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia conorii str. Malish 7] gi|32129822|sp|Q92IS3|ODPA_RICCN RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|15619410|gb|AAL02885.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia conorii str. Malish 7] Length = 326 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 168/315 (53%), Positives = 226/315 (71%), Gaps = 1/315 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M +GD IT Sbjct: 11 TKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAIDMVKQKGDSTIT 70 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+H HI+ G + ++AEL GR G SKGKGGSMH+F+ N FYGGHGIVGAQV +G Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFNVPNKFYGGHGIVGAQVPIG 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AF KY + IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+ Sbjct: 131 TGLAFVEKYNDTHNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVA 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++ + K+G SF I G Q+DGMD + +A Y R + P+I+E+ TYRYRGH Sbjct: 191 RSTFMRDLYKKGASFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR++EE+ + + DP+ +RK +L NK+ +E DLK IE +V++I+ +VEF+ Sbjct: 251 SMSDPAKYRSKEEVEQYK-ERDPLVIIRKTILDNKYVTEADLKAIEQSVKEIVKEAVEFS 309 Query: 348 QSDKEPDPAELYSDI 362 ++ PD ELY+ + Sbjct: 310 ENSPLPDEGELYTQV 324 >gi|157803481|ref|YP_001492030.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Rickettsia canadensis str. McKiel] gi|157784744|gb|ABV73245.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Rickettsia canadensis str. McKiel] Length = 329 Score = 365 bits (936), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 166/315 (52%), Positives = 227/315 (72%), Gaps = 1/315 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE+ + +++ M+L+RRFEEK QLYGMG +GGFCHL IGQEAVI + + +GD IT+ Sbjct: 12 KEEYIKSFKNMILLRRFEEKCSQLYGMGEIGGFCHLYIGQEAVISAVDIVKKKGDSTITS 71 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+H H++ G + ++AEL GR G SKGKGGSMH+F N FYGGHGIVGAQV +GT Sbjct: 72 YRDHAHVILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDVPNKFYGGHGIVGAQVPIGT 131 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+AFA KY ++ IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV R Sbjct: 132 GLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMAALWGLAVVYIIENNEYSMGTSVVR 191 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++ + K+G SF I G Q+DGM+ + +A Y R P+I+E+ TYRYRGHS Sbjct: 192 STFMRDLYKKGESFGIKGFQLDGMNFEEMYDGTKQAAEYVRETSQPLILEVKTYRYRGHS 251 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YR++EE+ + + DP+ +RK +L +K+A+E DLKEIE +V++I+ +VEF++ Sbjct: 252 MSDPAKYRSKEEVEQYK-KRDPLVIIRKTILDDKYATEADLKEIEQSVKEILKEAVEFSE 310 Query: 349 SDKEPDPAELYSDIL 363 + PD ELY++I Sbjct: 311 NSPLPDEGELYTNIF 325 >gi|15604131|ref|NP_220646.1| pyruvate dehydrogenase E1 component, alpha subunit precursor (pdhA) [Rickettsia prowazekii str. Madrid E] gi|7674154|sp|Q9ZDR4|ODPA_RICPR RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|3860823|emb|CAA14723.1| PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT PRECURSOR (pdhA) [Rickettsia prowazekii] gi|292571859|gb|ADE29774.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia prowazekii Rp22] Length = 326 Score = 362 bits (928), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 167/316 (52%), Positives = 228/316 (72%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M +GD IT+ Sbjct: 12 KEEYIKSFKDMLLLRRFEEKCGQLYGMGKIGGFCHLYIGQEAVISAVAMIKKKGDSTITS 71 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+H HI+ G + ++AEL GR G SKGKGGSMH+F N FYGGHGIVGAQV +GT Sbjct: 72 YRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKFYGGHGIVGAQVPIGT 131 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+AFA KY ++ IC GDGA NQGQVYE+FN+A+LW L ++Y+IENN+Y+MGTSV+R Sbjct: 132 GLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMASLWGLPIVYIIENNEYSMGTSVAR 191 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++ + K+G SF I G Q+DGMD + + Y R + P+I+E+ TYRYRGHS Sbjct: 192 STFMCDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHS 251 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YR++EE+ + + D + ++R+ +L NK+A+E DLK IE +VR+II +VEF++ Sbjct: 252 MSDPAKYRSKEEVEKYK-ERDTLVRIREIILDNKYATEADLKAIEQSVREIIKVAVEFSE 310 Query: 349 SDKEPDPAELYSDILI 364 + P ELY++I + Sbjct: 311 NSPLPAEDELYTEIYV 326 >gi|51473458|ref|YP_067215.1| pyruvate decarboxylase [Rickettsia typhi str. Wilmington] gi|81610813|sp|Q68XA9|ODPA_RICTY RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|51459770|gb|AAU03733.1| Pyruvate decarboxylase [Rickettsia typhi str. Wilmington] Length = 326 Score = 359 bits (921), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 166/315 (52%), Positives = 228/315 (72%), Gaps = 1/315 (0%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI +++ +GD IT+Y Sbjct: 13 EEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVELIKKKGDSTITSY 72 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+H HI+ G + ++AEL GR G SKGKGGSMH+F N FYGGHGIVGAQV +GTG Sbjct: 73 RDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKFYGGHGIVGAQVPIGTG 132 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +AFA KY ++ IC GDGA NQGQVYE+FN+A+LW L V+Y+IENN+Y+MGTSVSR+ Sbjct: 133 LAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMASLWGLPVVYIIENNEYSMGTSVSRS 192 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + K+G SF I G Q+DGMD + + Y R + P+I+E+ TYRYRGHSM Sbjct: 193 TFMRDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSM 252 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA YR++EE+ + + D + ++R+ +L NK+A+E DLK IE +V+++I +VEF+++ Sbjct: 253 SDPAKYRSKEEVAKYKE-RDTLVRIRQIILDNKYATEEDLKAIERSVQEVIKVAVEFSEN 311 Query: 350 DKEPDPAELYSDILI 364 P ELY+DI + Sbjct: 312 SPLPSEDELYTDIYV 326 >gi|255530087|ref|YP_003090459.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Pedobacter heparinus DSM 2366] gi|255343071|gb|ACU02397.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Pedobacter heparinus DSM 2366] Length = 331 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 169/319 (52%), Positives = 223/319 (69%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E NK+ L + MLL+R+FEEK GQLYG + GFCHL IGQEAV+ G ++ +GD M Sbjct: 5 EINKDTYLKWFESMLLMRKFEEKTGQLYGQQKIRGFCHLYIGQEAVVAGAISAMQQGDSM 64 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT YR+H H LA GV A IMAE+ G+ G+SKGKGGSMHMFS + FYGGH IVG Q+ Sbjct: 65 ITTYRDHAHALALGVSADSIMAEMYGKATGVSKGKGGSMHMFSKAHHFYGGHAIVGGQIP 124 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY+ +D + + GDGA QG + E+FN+A LW L V++V ENN YAMGTS Sbjct: 125 LGAGIAFAEKYKGTDNVNICYMGDGAVRQGALNEAFNMAMLWKLPVVFVCENNFYAMGTS 184 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R + T+ K G+ F++P VDGMD AV MD+A+ RA +GP +EM TYRYR Sbjct: 185 VERTTNMTDIYKIGLGFDMPCAPVDGMDPVAVHNAMDEAIQRARAGEGPTFLEMRTYRYR 244 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YRT++E+ E ++ DPIE VR+ +L K+A + ++EIE V++I++ SV+ Sbjct: 245 GHSMSDPAKYRTKDELEEYKAK-DPIETVREVILKEKYADQAWIEEIENKVKEIVDQSVK 303 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ PD +ELY+D+ + Sbjct: 304 FAEESPWPDASELYTDVYV 322 >gi|114778875|ref|ZP_01453674.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Mariprofundus ferrooxydans PV-1] gi|114550910|gb|EAU53475.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Mariprofundus ferrooxydans PV-1] Length = 349 Score = 356 bits (913), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 164/316 (51%), Positives = 228/316 (72%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +++E + ML IRRFEEKAGQ+YG+ +GGFCHLC GQEAV VGM+ + D M+ Sbjct: 18 YDEETLHQLHDSMLFIRRFEEKAGQMYGLKKIGGFCHLCNGQEAVCVGMQHAAEPTDYMM 77 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HGHILA G D + +MAEL GR GGI KGKGGSMHMF F GG+GIVG QV + Sbjct: 78 TSYRDHGHILARGSDPTAVMAELLGRAGGIVKGKGGSMHMFDVSKNFAGGNGIVGEQVPI 137 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G F++ YR ++ + GDG NQG VYESFN+AALW L +++++ENNQYAMGTS+ Sbjct: 138 GLGFGFSSWYRDDGRVTICIMGDGGINQGAVYESFNMAALWKLPIVFLVENNQYAMGTSL 197 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA+T KRG+SF IPGM++DGMD+ + M +A+A+ R+ +GPI++E +TYRYRG Sbjct: 198 ERASAETQLFKRGISFKIPGMKIDGMDVLEFEKKMREAIAHARSGEGPILVEAMTYRYRG 257 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTR E++E R+ DPI +++ +++ A+E KE + +++K + + Sbjct: 258 HSMSDPATYRTRAEVDEWRTGRDPIARLQAQMIEAGLATEESFKEKDRDIKKEVVAVAKA 317 Query: 347 AQSDKEPDPAELYSDI 362 A++ EPD +EL++D+ Sbjct: 318 AEAQPEPDASELWTDV 333 >gi|197103188|ref|YP_002128566.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Phenylobacterium zucineum HLK1] gi|196480464|gb|ACG79991.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Phenylobacterium zucineum HLK1] Length = 354 Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 168/310 (54%), Positives = 230/310 (74%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ Y+ M LIRRFEE+A +LYGMG++GGFCHL IGQEAV VG+ + GDQ+IT++R+H Sbjct: 42 LADYQQMALIRRFEEEAARLYGMGLIGGFCHLSIGQEAVAVGVVGARAPGDQVITSHRDH 101 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G+ LACG++ +MAELTGR GG S+GKGGSMH+F+ FYGGHGIVGA SLG+G+AF Sbjct: 102 GYALACGMEPRAVMAELTGRIGGASRGKGGSMHIFAPDQDFYGGHGIVGAPASLGSGLAF 161 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 AN+YR + ++ V FG+GAANQGQVYE FN+AALW L +Y+IENN+YAMGT+V R++++ Sbjct: 162 ANRYRSNGRVAFVVFGEGAANQGQVYECFNMAALWRLPALYIIENNRYAMGTAVERSASE 221 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 F +RG+SF IPG VDGM++ AV+ +A + RA +GP ++EM TYRYRGHSMSDP Sbjct: 222 PRFYRRGLSFGIPGEAVDGMNVVAVREATARAARHVRAGEGPYLLEMKTYRYRGHSMSDP 281 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 A YR R+E+ +R DPI+Q+++ +L +L +I+ V++ I ++ FA++ E Sbjct: 282 ARYRPRDEVERVRRRRDPIQQLKRLVLTRDPDLATELDDIDKTVQQRIEDASAFAKASPE 341 Query: 353 PDPAELYSDI 362 P P L DI Sbjct: 342 PPPEHLLRDI 351 >gi|149277282|ref|ZP_01883424.1| pyruvate dehydrogenase E1 component alpha subunit [Pedobacter sp. BAL39] gi|149232159|gb|EDM37536.1| pyruvate dehydrogenase E1 component alpha subunit [Pedobacter sp. BAL39] Length = 331 Score = 352 bits (902), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 170/319 (53%), Positives = 222/319 (69%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E NK+ L + MLL+R+FEEK GQLYG + GFCHL IGQEAV+ G +L D M Sbjct: 5 EINKDTYLKWFESMLLMRKFEEKTGQLYGQQKIRGFCHLYIGQEAVVAGAISALQPEDSM 64 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H H LA GV A+ IMAE+ G+ G SKGKGGSMHMFS ++ FYGGHGIVG Q+ Sbjct: 65 ITAYRDHAHALAKGVSANSIMAEMYGKATGCSKGKGGSMHMFSKEHNFYGGHGIVGGQIP 124 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY+ + + V GDGA QG + E+FN+A LW L VI+V ENN YAMGTS Sbjct: 125 LGAGIAFAEKYKGTKNVNVCYMGDGAVRQGALNEAFNMAMLWKLPVIFVCENNGYAMGTS 184 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R + T+ K G+ F++P VDGMD AV MD+A R +GP +EM TYRYR Sbjct: 185 VERTTNMTDIYKIGLGFDMPCAPVDGMDPVAVHNAMDEAAQRARNGEGPTFLEMRTYRYR 244 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YRT++E+ ++ DPIEQVR+ +L K+A + ++EIE V++I+++SV+ Sbjct: 245 GHSMSDPAKYRTKDELESYKTK-DPIEQVRETILTEKYADQAWIEEIEAKVKQIVDDSVK 303 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ P+ +ELY+D+ + Sbjct: 304 FAEESPWPEASELYTDVYV 322 >gi|209156128|gb|ACI34296.1| Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor [Salmo salar] Length = 393 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 181/340 (53%), Positives = 237/340 (69%), Gaps = 7/340 (2%) Query: 27 ATSSVDCVDIPFLEGFE--VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + VD+ LE + +EQ L YR M IRR E KA QLY ++ GFCHL Sbjct: 37 ATFDIKKVDLHRLEEGPPLTATLTREQGLKYYRTMQTIRRMELKADQLYKQKIIRGFCHL 96 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 GQEA VG++ +T D +ITAYR HG+ L G +IMAELTGR+GGI+KGKGGSM Sbjct: 97 YDGQEACAVGIEGGITLSDHLITAYRAHGYTLTRGGTIREIMAELTGRRGGIAKGKGGSM 156 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+ TKN FYGG+GIVGAQV LG G+A A KY +D++CV +GDGAANQGQ++E++N++ Sbjct: 157 HMY-TKN-FYGGNGIVGAQVPLGAGVALACKYLGNDQLCVSLYGDGAANQGQIFETYNMS 214 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 +LW L +I++ ENNQYAMGTSV R++A T + KRG IPG++VDGMD+ V+ A Sbjct: 215 SLWKLPIIFICENNQYAMGTSVERSAASTEYYKRGDY--IPGIRVDGMDVLCVREATKFA 272 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 +CR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R+L N Sbjct: 273 ADHCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPISMLKDRMLSNNM 332 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 AS +LKEI++ VRK I ++ +FA +D EP +L S I Sbjct: 333 ASIEELKEIDIAVRKEIEDAAQFATTDPEPPLDDLCSHIF 372 >gi|223648696|gb|ACN11106.1| Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor [Salmo salar] Length = 400 Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 180/340 (52%), Positives = 236/340 (69%), Gaps = 7/340 (2%) Query: 27 ATSSVDCVDIPFLEGFE--VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + VD+ LE + +E+ L YR M IRR E KA QLY ++ GFCHL Sbjct: 44 ATFDIKKVDLHRLEEGPPLTATLTREEGLKYYRTMQTIRRMELKADQLYKQKIIRGFCHL 103 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 GQEA VG++ +T D +ITAYR HG+ L G +IMAELTGR+GGI+KGKGGSM Sbjct: 104 YDGQEACAVGIEGGITLSDHLITAYRAHGYTLTRGGTVREIMAELTGRRGGIAKGKGGSM 163 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+ TKN FYGG+GIVGAQV LG G+A A KY +D++CV +GDGAANQGQ++E++N++ Sbjct: 164 HMY-TKN-FYGGNGIVGAQVPLGAGVALACKYLGNDQLCVSLYGDGAANQGQIFETYNMS 221 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 +LW L +I++ ENNQY MGTSV R+SA T + KRG IPG++VDGMD+ V+ A Sbjct: 222 SLWKLPIIFICENNQYGMGTSVERSSASTEYYKRGDY--IPGLRVDGMDVLCVREATKFA 279 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 +CR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R+L N Sbjct: 280 ADHCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPISMLKDRMLSNNM 339 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 AS +LKEI++ VRK I ++ +FA +D EP +L S I Sbjct: 340 ASIDELKEIDIAVRKEIEDAAQFATTDPEPPLDDLCSHIF 379 >gi|124009357|ref|ZP_01694035.1| pyruvate dehydrogenase E1 component, alpha subunit [Microscilla marina ATCC 23134] gi|123985019|gb|EAY24970.1| pyruvate dehydrogenase E1 component, alpha subunit [Microscilla marina ATCC 23134] Length = 383 Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 165/317 (52%), Positives = 216/317 (68%), Gaps = 1/317 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +F+KE + YR M LIR+FE K GQ+YG + GF HL IGQEA G +L +GD+ Sbjct: 57 KFDKETYMYWYRSMQLIRKFEAKCGQVYGRQKIKGFLHLYIGQEACASGAVSALQKGDKY 116 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+HGH LA G D +MAEL G+ GISKGKGGSMH+F ++GF GGHGIVG Q+ Sbjct: 117 ITAYRDHGHPLALGTDPKAVMAELYGKATGISKGKGGSMHLFDKEHGFMGGHGIVGGQIP 176 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY ++ K+C+ GDGA QG +E+ N+A W L VI+VIENN YAMGTS Sbjct: 177 LGAGIAFAEKYNKTGKVCMCYMGDGAVRQGAFHEALNMAMTWKLPVIFVIENNGYAMGTS 236 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R S T + G S++IP VD M + V +++KA RA +GP ++E TYR++ Sbjct: 237 VQRTSNVTELYQLGESYDIPSEPVDAMQVEEVHLSVEKAAERARAGEGPTLLEFRTYRFK 296 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YRT+EE NE + N DPIEQVR+ +L K+A+E DL EI+ ++K + +V+ Sbjct: 297 GHSMSDPAKYRTKEEENEYK-NQDPIEQVRESILKGKFATEDDLAEIDKEIKKTVEEAVK 355 Query: 346 FAQSDKEPDPAELYSDI 362 FA PDP+E + D+ Sbjct: 356 FADESPYPDPSEAFKDV 372 >gi|155371825|ref|NP_001094516.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor [Bos taurus] gi|182667934|sp|A7MB35|ODPA_BOVIN RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor gi|154426034|gb|AAI51314.1| PDHA1 protein [Bos taurus] gi|296470516|gb|DAA12631.1| pyruvate dehydrogenase E1 alpha 1 precursor [Bos taurus] Length = 390 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 235/335 (70%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRRGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 211 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 212 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATKFA 269 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 270 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 329 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 364 >gi|291407172|ref|XP_002719987.1| PREDICTED: pyruvate dehydrogenase E1 alpha 1 [Oryctolagus cuniculus] Length = 390 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 235/335 (70%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRRGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 211 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 212 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 269 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 270 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 329 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 364 >gi|57657|emb|CAA78146.1| pyruvate dehydrogenase E1 alpha form 1 subunit [Rattus rattus] Length = 390 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 234/335 (69%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 211 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 212 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATKFA 269 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 270 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 329 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 364 >gi|74006561|ref|XP_537975.2| PREDICTED: similar to Pyruvate dehydrogenase E1 component alpha subunit, somatic form, mitochondrial precursor (PDHE1-A type I) isoform 1 [Canis familiaris] Length = 390 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 235/335 (70%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLRYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRRGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 211 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 212 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 269 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 270 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 329 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 364 >gi|124430510|ref|NP_001004072.2| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor [Rattus norvegicus] gi|71051030|gb|AAH98897.1| Pyruvate dehydrogenase (lipoamide) alpha 1 [Rattus norvegicus] gi|149042441|gb|EDL96148.1| rCG36458 [Rattus norvegicus] Length = 390 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 234/335 (69%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 211 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 212 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATKFA 269 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 270 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 329 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 364 >gi|6679261|ref|NP_032836.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor [Mus musculus] gi|548409|sp|P35486|ODPA_MOUSE RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor gi|200277|gb|AAA53046.1| pyruvate dehydrogenase [Mus musculus] gi|13938051|gb|AAH07142.1| Pyruvate dehydrogenase E1 alpha 1 [Mus musculus] gi|74138129|dbj|BAE28567.1| unnamed protein product [Mus musculus] gi|74141964|dbj|BAE41046.1| unnamed protein product [Mus musculus] gi|74204462|dbj|BAE39978.1| unnamed protein product [Mus musculus] gi|74207750|dbj|BAE40117.1| unnamed protein product [Mus musculus] gi|74217000|dbj|BAE26608.1| unnamed protein product [Mus musculus] gi|123232199|emb|CAM22390.1| pyruvate dehydrogenase E1 alpha 1 [Mus musculus] gi|148708861|gb|EDL40808.1| pyruvate dehydrogenase E1 alpha 1 [Mus musculus] Length = 390 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 234/335 (69%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 211 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 212 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATKFA 269 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 270 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 329 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 364 >gi|194227717|ref|XP_001492207.2| PREDICTED: similar to Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor (PDHE1-A type I) [Equus caballus] Length = 390 Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 235/335 (70%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLRYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRRGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYFGKDEVCLTLYGDGAANQGQIFEAYNMA 211 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 212 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 269 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 270 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 329 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 364 >gi|109503594|ref|XP_001060918.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like isoform 2 [Rattus norvegicus] gi|293342557|ref|XP_002725261.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like isoform 2 [Rattus norvegicus] Length = 399 Score = 345 bits (884), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 181/362 (50%), Positives = 246/362 (67%), Gaps = 11/362 (3%) Query: 4 AKQDVTVGDIKMALNPSVSAKR----AATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYR 57 A++ + G++ + + + A R AT + D+ LE G V+ +E L YR Sbjct: 16 AQKPILNGNLALQASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYR 75 Query: 58 LMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 +M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 76 MMQTVRRMELKAFQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFT 135 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 G+ I+AELTGR+GG +KGKGGSMHM++ KN FYGG+GIVGAQV LG GIA A KY Sbjct: 136 RGLPVRAILAELTGRRGGCAKGKGGSMHMYA-KN-FYGGNGIVGAQVPLGAGIALACKYN 193 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 D++C+ +GDGAANQGQ++E++++AALW L I++ ENN+Y MGTSV RA+A T++ K Sbjct: 194 GKDEVCLTLYGDGAANQGQIFEAYDMAALWKLPCIFICENNRYGMGTSVERAAASTDYYK 253 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYR 296 RG F IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP +YR Sbjct: 254 RG-DF-IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYR 311 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 TREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 312 TREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLE 371 Query: 357 EL 358 EL Sbjct: 372 EL 373 >gi|301756280|ref|XP_002914000.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like [Ailuropoda melanoleuca] Length = 380 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 177/335 (52%), Positives = 235/335 (70%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 24 ATFEIKKCDLHRLEEGPPVTTVLTREDGLRYYRMMQTVRRMELKADQLYKQKIIRGFCHL 83 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 84 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRRGGCAKGKGGSM 143 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 144 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 201 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 202 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 259 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 A+CR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 260 AAHCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 319 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 320 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 354 >gi|109503592|ref|XP_001060860.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like isoform 1 [Rattus norvegicus] gi|293342555|ref|XP_002725260.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like isoform 1 [Rattus norvegicus] Length = 392 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 177/335 (52%), Positives = 234/335 (69%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 36 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKAFQLYKQKIIRGFCHL 95 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ I+AELTGR+GG +KGKGGSM Sbjct: 96 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSM 155 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++++A Sbjct: 156 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYDMA 213 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 214 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATKFA 271 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 272 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 331 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 332 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 366 >gi|126325609|ref|XP_001368538.1| PREDICTED: similar to pyruvate dehydrogenase (lipoamide) (EC 1.2.4.1) alpha chain precursor - dunnart (Sminthopsis macroura) (fragment) [Monodelphis domestica] Length = 1049 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 166/313 (53%), Positives = 222/313 (70%), Gaps = 5/313 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L Y++M +RR E KA QLY ++ GFCHL GQEA VG++ + D +I Sbjct: 715 LTREEGLKYYKIMQTVRRMELKADQLYKQKIIRGFCHLYDGQEACCVGLEAGINPSDHVI 774 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG G+ +I+AELTGR+GG +KGKGGSMHM++ FYGG+GIVGAQV L Sbjct: 775 TAYRAHGFTYTRGLTVREILAELTGRRGGCAKGKGGSMHMYA--KNFYGGNGIVGAQVPL 832 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIA A KY D+IC+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV Sbjct: 833 GAGIALACKYNGKDEICLTLYGDGAANQGQIFETYNMAALWKLPCIFICENNRYGMGTSV 892 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T++ KRG IPG++VDGMD+ V+ A AYCR+ KGP+++E+ TYRY G Sbjct: 893 ERAAASTDYYKRGDY--IPGIRVDGMDVLCVREATKFAAAYCRSGKGPMVMELQTYRYHG 950 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREEI E+RS DPI ++ R+++N AS +LKEI++ VRK I ++ + Sbjct: 951 HSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNNNLASIEELKEIDVEVRKEIEDAAQ 1010 Query: 346 FAQSDKEPDPAEL 358 FA +D EP EL Sbjct: 1011 FATADPEPPLEEL 1023 >gi|119364627|sp|P26284|ODPA_RAT RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor Length = 390 Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 233/335 (69%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFNRGHAVRAILAELTGRRGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 211 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 212 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATKFA 269 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 270 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 329 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 364 >gi|149701576|ref|XP_001497720.1| PREDICTED: similar to Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor (PDHE1-A type I) [Equus caballus] Length = 391 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 174/335 (51%), Positives = 232/335 (69%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY + GFCHL Sbjct: 35 ATFEIKKCDLHRLEEGPPVTAVLTREDGLQYYRMMQTVRRMELKADQLYKQKFIRGFCHL 94 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG+K D ITAYR HG A G+ I+AELTGR+GG +KGKGGSM Sbjct: 95 CDGQEACYVGLKAGANPSDHAITAYRAHGLCYAYGLSVQSILAELTGRRGGCAKGKGGSM 154 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+ FYGG+GIVGAQV LG G+A A KY+ S+++C+ +GDGAANQGQ++E++N+A Sbjct: 155 HMYG--RNFYGGNGIVGAQVPLGAGVALACKYKGSNEVCLTLYGDGAANQGQIFEAYNMA 212 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGT++ RASA T++ KR V+F IPG++VDGMD+ V+ A Sbjct: 213 ALWKLPCIFICENNRYGMGTAIERASASTDYYKR-VNF-IPGLRVDGMDVLCVREAAKFA 270 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI +RS DPI ++ ++L+NK Sbjct: 271 ADYCRSGKGPIVMELQTYRYHGHSMSDPGISYRTREEIQNIRSKSDPIMLLKDKMLNNKL 330 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +S +LKEI++ VRK I+++ +FA +D EP EL Sbjct: 331 SSIEELKEIDVGVRKEIDDAAQFATTDPEPPLEEL 365 >gi|281352954|gb|EFB28538.1| hypothetical protein PANDA_001830 [Ailuropoda melanoleuca] Length = 353 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 170/313 (54%), Positives = 225/313 (71%), Gaps = 5/313 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E L YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +I Sbjct: 19 LTREDGLRYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 78 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG G+ +I+AELTGR+GG +KGKGGSMHM++ KN FYGG+GIVGAQV L Sbjct: 79 TAYRAHGFTFTRGLSVREILAELTGRRGGCAKGKGGSMHMYA-KN-FYGGNGIVGAQVPL 136 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIA A KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV Sbjct: 137 GAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 196 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T++ KRG F IPG++VDGMDI V+ A A+CR+ KGPI++E+ TYRY G Sbjct: 197 ERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFAAAHCRSGKGPILMELQTYRYHG 254 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ + Sbjct: 255 HSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQ 314 Query: 346 FAQSDKEPDPAEL 358 FA +D EP EL Sbjct: 315 FATADPEPPLEEL 327 >gi|326798569|ref|YP_004316388.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Sphingobacterium sp. 21] gi|326549333|gb|ADZ77718.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sphingobacterium sp. 21] Length = 331 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 164/320 (51%), Positives = 216/320 (67%), Gaps = 1/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + KE L Y+ MLL+R+FEEKAGQLYG + GFCHL IGQEAV+ G L + D Sbjct: 4 TPITKETYLEWYKSMLLMRKFEEKAGQLYGQQKIRGFCHLYIGQEAVVAGAMSVLRKEDS 63 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 MITAYR+H H LA G+ A+ MAEL G+ G SKGKGGSMH F +N F GGHGIVG Q+ Sbjct: 64 MITAYRDHAHALAKGMSANAAMAELFGKVTGCSKGKGGSMHFFDKENNFAGGHGIVGGQI 123 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AFA KY +D +CV GDGA QG + E+FN+A LW L VI+V ENN YAMGT Sbjct: 124 PLGAGLAFAEKYNGTDNVCVCYMGDGAVRQGSLNETFNMAMLWKLPVIFVCENNGYAMGT 183 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R + + K G+ F++P VDGMD+ AV MD+AV R +GP +E+ TYRY Sbjct: 184 SVKRTTNMIDIYKMGLGFDMPSAPVDGMDVVAVHNAMDEAVQRARKGEGPTFLEIRTYRY 243 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +GHSMSDPA YRT+EE+ + + DPI V+ ++ NK+A E + E V++I++ +V Sbjct: 244 KGHSMSDPAKYRTKEELEQYKE-RDPIAAVKHAIIENKYADEQWFDQEEAEVKRIVDEAV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FA+ + P+P ELY+D+ + Sbjct: 303 KFAEESEYPNPEELYTDVYV 322 >gi|62858729|ref|NP_001017072.1| pyruvate dehydrogenase E1 alpha 1 isoform 2 [Xenopus (Silurana) tropicalis] gi|89266821|emb|CAJ83395.1| pyruvate dehydrogenase (lipoamide) alpha 1 [Xenopus (Silurana) tropicalis] Length = 395 Score = 343 bits (879), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 179/362 (49%), Positives = 242/362 (66%), Gaps = 7/362 (1%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSE--FNKEQELSAYRLMLL 61 A++ VT + +A AT + D+ LE ++ +EQ L YR M Sbjct: 16 AQKPVTAVRVMVASRNYADFASEATFDIKKCDVHRLEEGPPTQAVLTREQGLQYYRTMQT 75 Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 IRR E K+ QLY ++ GFCHL GQEA VG++ ++ D +ITAYR HG+ GV Sbjct: 76 IRRMELKSDQLYKQKIIRGFCHLYDGQEACCVGLEAAINPTDHLITAYRAHGYSYTRGVS 135 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 +I+AELTGR+GG +KGKGGSMHM++ KN FYGG+GIVGAQV LG GIA A K+ D+ Sbjct: 136 VKEILAELTGRRGGCAKGKGGSMHMYA-KN-FYGGNGIVGAQVPLGAGIALACKFFGKDE 193 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 ICV +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG Sbjct: 194 ICVALYGDGAANQGQIFETYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDY 253 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREE 300 IPG++VDGMD+ V+ A +CR+ KGPI++E+ TYRY GHSMSDP +YRTREE Sbjct: 254 --IPGLRVDGMDVLCVREATQFAADHCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREE 311 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 I E+RS DPI ++ R+L+N +S +LKEI++ VRK I + +FA +D EP E+ + Sbjct: 312 IQEVRSKSDPITLLKDRMLNNNLSSVEELKEIDVEVRKEIEEAAQFATTDPEPPLEEIAN 371 Query: 361 DI 362 I Sbjct: 372 HI 373 >gi|325105825|ref|YP_004275479.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Pedobacter saltans DSM 12145] gi|324974673|gb|ADY53657.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Pedobacter saltans DSM 12145] Length = 331 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 159/317 (50%), Positives = 212/317 (66%), Gaps = 1/317 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE L Y LML +RRFEEK GQLYG + GFCHL IGQEAVI G + +GD +IT Sbjct: 7 TKETYLYWYELMLFLRRFEEKTGQLYGQQKIRGFCHLYIGQEAVIAGTMSATKKGDSLIT 66 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H LA G+ A MAE+ G+ G SKGKGGSMH F +N FYGGHGIVG Q+ LG Sbjct: 67 TYRDHAHALAKGMSAKAAMAEMYGKATGCSKGKGGSMHFFDKENNFYGGHGIVGGQIPLG 126 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIAFA KY +D + + GDGA QG + E+FN+A W L V++++ENN YAMGTSV+ Sbjct: 127 AGIAFAEKYLGTDNVNLCYMGDGAVRQGALNETFNMAMNWKLPVVFIVENNGYAMGTSVA 186 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R + + K G+ + +P M VDGMD AV +D+AV R +GP +E+ TYRY+GH Sbjct: 187 RTANTQDIYKLGLGYEMPSMPVDGMDPVAVHNAIDEAVQRARRDEGPTFLEIRTYRYKGH 246 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDP YRT+EE+ E ++ DPIE V++++L KWA + E+ ++ I+ +V+FA Sbjct: 247 SMSDPQKYRTKEEVEEYKAK-DPIEVVKEKILQEKWADQAWFDEVAAKIKAEIDEAVKFA 305 Query: 348 QSDKEPDPAELYSDILI 364 + PDP+ELY+D+ + Sbjct: 306 EESPWPDPSELYTDVYV 322 >gi|320167542|gb|EFW44441.1| pyruvate dehydrogenase E1 alpha 1 [Capsaspora owczarzaki ATCC 30864] Length = 389 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 167/316 (52%), Positives = 225/316 (71%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ L YR M +IRR E AG LY + GFCHL GQEAV G++ ++T+ D +IT Sbjct: 56 TKEELLDYYRTMQVIRRMETAAGDLYKSKFIRGFCHLYSGQEAVCTGVEAAITKEDSVIT 115 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG GV ++AELTGRQGG +KGKGGSMHM++ + F+GG+GIVGAQV LG Sbjct: 116 AYRAHGFTYVRGVSVKGVLAELTGRQGGCAKGKGGSMHMYN--HNFFGGNGIVGAQVPLG 173 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIA A++Y+ + K+C+ +GDGAANQGQ++E++N+AALW L I++ ENNQY MGT++ Sbjct: 174 AGIALAHQYQGNKKVCISLYGDGAANQGQIFEAYNMAALWKLPAIFICENNQYGMGTAIG 233 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RA+A T + RG IPG++V+GMD+ AV+ AV + RA KGP ++EM+TYRY GH Sbjct: 234 RAAASTEYYTRGDY--IPGIKVNGMDVLAVREATKFAVDHARAGKGPFVLEMITYRYGGH 291 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YR+REEI +MRSN+DPI V+ RLL A+ +LKEI+ VRK ++ +VEF Sbjct: 292 SMSDPGTSYRSREEIQQMRSNNDPINNVKNRLLSTNLATAEELKEIDQAVRKEVDEAVEF 351 Query: 347 AQSDKEPDPAELYSDI 362 A+ D E E Y+D+ Sbjct: 352 AKEDAELPVEEAYTDV 367 >gi|50539866|ref|NP_001002399.1| pyruvate dehydrogenase E1 alpha 1 [Danio rerio] gi|49901091|gb|AAH76185.1| Zgc:92705 [Danio rerio] Length = 393 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 168/318 (52%), Positives = 227/318 (71%), Gaps = 5/318 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E L YR+M +RR E KA QLY ++ GFCHL GQEA VG++ + D +I Sbjct: 59 LTREDGLKYYRMMQTMRRMELKADQLYKQKIIRGFCHLYDGQEACAVGIEAGIKPTDHLI 118 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG+ GV +IMAELTGR+GG++KGKGGSMHM++ KN FYGG+GIVGAQV L Sbjct: 119 TAYRAHGYTYTRGVSVKEIMAELTGRRGGVAKGKGGSMHMYA-KN-FYGGNGIVGAQVPL 176 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+A A +Y+ +++ICV +GDGAANQGQ++ESFN+AALW L I++ ENN+Y MGTSV Sbjct: 177 GAGVALACQYQGNNEICVTLYGDGAANQGQIFESFNMAALWKLPCIFICENNKYGMGTSV 236 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA T++ KRG F IPG++VDGMD+ V+ A YCR+ KGPI++E+ TYRY G Sbjct: 237 ERASASTDYYKRG-DF-IPGLRVDGMDVLGVREATKFAADYCRSGKGPILMELQTYRYHG 294 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREEI E+RS DPI ++ R++ + AS ++K+I+ ++RK + + + Sbjct: 295 HSMSDPGVSYRTREEIQEVRSKSDPITTLKDRMISSNMASLEEIKDIDADIRKEVEEAAQ 354 Query: 346 FAQSDKEPDPAELYSDIL 363 FA +D EP +L + I Sbjct: 355 FATTDPEPPLEDLCNHIF 372 >gi|53749653|ref|NP_998558.1| pyruvate dehydrogenase E1 alpha 1 [Danio rerio] gi|38511984|gb|AAH60928.1| Pdha1 protein [Danio rerio] gi|47940364|gb|AAH71373.1| Pyruvate dehydrogenase (lipoamide) alpha 1 [Danio rerio] gi|169145943|emb|CAQ14602.1| novel protein (zgc:73271) [Danio rerio] Length = 393 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 168/318 (52%), Positives = 225/318 (70%), Gaps = 5/318 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L YR M +RR E KA QLY ++ GFCHL GQEA VG++ + D +I Sbjct: 59 LTREEGLQYYRTMQTMRRMELKADQLYKQKIIRGFCHLYDGQEACAVGIEAGINLSDHLI 118 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG+ L G +IMAELTGR+GGI+KGKGGSMHM++ FYGG+GIVGAQV L Sbjct: 119 TAYRAHGYTLTRGGTVREIMAELTGRRGGIAKGKGGSMHMYTKH--FYGGNGIVGAQVPL 176 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+A A KY+ +++CV +GDGAANQGQ++E++N+A+LW L I++ ENN+Y MGTSV Sbjct: 177 GAGVALACKYQGKNELCVCLYGDGAANQGQIFETYNMASLWKLPCIFICENNKYGMGTSV 236 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T++ KRG F IPG++VDGMD+ V+ A +CR+ KGPI++E+ TYRY G Sbjct: 237 ERAAASTDYYKRG-DF-IPGLRVDGMDVLCVREATKFAAEHCRSGKGPILMELQTYRYHG 294 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREEI E+RS DPI ++ R+L N AS +LKEI++ VRK I ++ + Sbjct: 295 HSMSDPGVSYRTREEIQEVRSKSDPISLLKDRMLSNNMASVEELKEIDVEVRKEIEDAAQ 354 Query: 346 FAQSDKEPDPAELYSDIL 363 FA +D EP +L + I Sbjct: 355 FATTDPEPPLEDLCNHIF 372 >gi|1079460|pir||A49360 pyruvate dehydrogenase (lipoamide) (EC 1.2.4.1) alpha chain precursor - dunnart (Sminthopsis macroura) (fragment) Length = 370 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 168/313 (53%), Positives = 224/313 (71%), Gaps = 5/313 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L Y++M +RR E KA QLY ++ GFCHL GQEA +G++ + D +I Sbjct: 36 LTREEGLKYYKIMQTVRRMELKADQLYKQKIIRGFCHLYDGQEACCMGLEAGINPTDHVI 95 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG G+ +I+AELTGR+GG +KGKGGSMHM++ KN FYGG+GIVGAQV L Sbjct: 96 TAYRAHGFTYTRGLPVREILAELTGRRGGCAKGKGGSMHMYA-KN-FYGGNGIVGAQVPL 153 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIA A KY D+IC+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV Sbjct: 154 GVGIALACKYNEKDEICLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 213 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T++ KRG F IPG+ VDGMD+ V+ A AYCR+ KGP+++E+ TYRY G Sbjct: 214 ERAAASTDYYKRG-DF-IPGIMVDGMDVLCVREATKFAAAYCRSGKGPMLMELQTYRYHG 271 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREEI E+RS DPI ++ R+++N AS +LKEI++ VRK I ++ + Sbjct: 272 HSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNNNLASIEELKEIDVEVRKEIEDAAQ 331 Query: 346 FAQSDKEPDPAEL 358 FA +D EP EL Sbjct: 332 FATADPEPPLEEL 344 >gi|1709452|sp|P52900|ODPA_SMIMA RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|450633|gb|AAA31589.1| pyruvate dehydrogenase E1-alpha subunit [Sminthopsis macroura] Length = 363 Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 168/313 (53%), Positives = 224/313 (71%), Gaps = 5/313 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L Y++M +RR E KA QLY ++ GFCHL GQEA +G++ + D +I Sbjct: 29 LTREEGLKYYKIMQTVRRMELKADQLYKQKIIRGFCHLYDGQEACCMGLEAGINPTDHVI 88 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG G+ +I+AELTGR+GG +KGKGGSMHM++ KN FYGG+GIVGAQV L Sbjct: 89 TAYRAHGFTYTRGLPVREILAELTGRRGGCAKGKGGSMHMYA-KN-FYGGNGIVGAQVPL 146 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIA A KY D+IC+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV Sbjct: 147 GVGIALACKYNEKDEICLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 206 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T++ KRG F IPG+ VDGMD+ V+ A AYCR+ KGP+++E+ TYRY G Sbjct: 207 ERAAASTDYYKRG-DF-IPGIMVDGMDVLCVREATKFAAAYCRSGKGPMLMELQTYRYHG 264 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREEI E+RS DPI ++ R+++N AS +LKEI++ VRK I ++ + Sbjct: 265 HSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNNNLASIEELKEIDVEVRKEIEDAAQ 324 Query: 346 FAQSDKEPDPAEL 358 FA +D EP EL Sbjct: 325 FATADPEPPLEEL 337 >gi|327268272|ref|XP_003218922.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like [Anolis carolinensis] Length = 469 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 171/316 (54%), Positives = 225/316 (71%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +E+ L Y+ M IRR E KA QLY ++ GFCHL GQEA VG++ ++ D +IT Sbjct: 136 TREEGLQYYKTMQTIRRMELKADQLYKQKIIRGFCHLYDGQEACCVGLEAAINPTDHLIT 195 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR H G+ +I+AELTGR GG +KGKGGSMHM++ KN FYGG+GIVGAQV LG Sbjct: 196 AYRAHAFTYTRGISVREILAELTGRIGGCAKGKGGSMHMYA-KN-FYGGNGIVGAQVPLG 253 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIA A KY D+ICV +GDGAANQGQ++E+FN+AALW L I++ ENN+Y MGTSV Sbjct: 254 AGIALACKYFGKDEICVTLYGDGAANQGQIFETFNMAALWKLPCIFICENNRYGMGTSVE 313 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RA+A T++ KRG F IPG++VDGMD+ AV+ A +CR+ KGPI++E+ TYRY GH Sbjct: 314 RAAASTDYYKRG-DF-IPGLRVDGMDVLAVREAAKFAANHCRSGKGPIVMELQTYRYHGH 371 Query: 288 SMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YRTREEI E+RS DPI ++ R+++N AS +LKEI++ VRK I ++ +F Sbjct: 372 SMSDPGVSYRTREEIQEVRSKSDPITLLKDRMVNNNLASVEELKEIDVEVRKEIEDAAQF 431 Query: 347 AQSDKEPDPAELYSDI 362 A +D EP +L + I Sbjct: 432 ATTDPEPPLEDLGNHI 447 >gi|297293054|ref|XP_001097880.2| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial [Macaca mulatta] Length = 438 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 173/335 (51%), Positives = 233/335 (69%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT ++ D+ LE G V+ + + L YR+ML +RR E KA QLY + GFCHL Sbjct: 82 ATFEIEKCDLHLLEEGPPVTTVLTRAEGLKYYRMMLTVRRMELKADQLYKQKFIRGFCHL 141 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +IT+YR HG G+ I+ ELTGR+GG +KGKGGSM Sbjct: 142 CDGQEACCVGLEAGINPSDHLITSYRAHGMCYTRGLSVRSILTELTGRRGGCAKGKGGSM 201 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+ TKN FYGG+GIVGAQ LG GIA A KY+ +++IC+ +GDGAANQGQ+ E+FN+A Sbjct: 202 HMY-TKN-FYGGNGIVGAQGPLGAGIALACKYKGNNEICLTLYGDGAANQGQIAEAFNMA 259 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L +++ ENN YAMGTS RA+A T++ KRG +F IPG++VDGMD+ V+ A Sbjct: 260 ALWKLPCVFICENNLYAMGTSAERAAASTDYYKRG-NF-IPGLKVDGMDVLCVREATKFA 317 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 YCR+ KGPI++E+ TYRY GHSMSDP +YRTR+EI E+RS DPI ++ R++++K Sbjct: 318 ADYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTRDEIQEVRSKRDPIMILQDRMVNSKL 377 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 A+ +LKEI V+K I+++ +FA SD EP EL Sbjct: 378 ATVEELKEIGTEVKKEIDDAAQFAISDPEPRLEEL 412 >gi|116004359|ref|NP_001070539.1| pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial [Bos taurus] gi|83406095|gb|AAI11210.1| Pyruvate dehydrogenase (lipoamide) alpha 2 [Bos taurus] gi|296486706|gb|DAA28819.1| pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial [Bos taurus] Length = 391 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 169/321 (52%), Positives = 229/321 (71%), Gaps = 6/321 (1%) Query: 40 EGFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 EG V+ +E L Y++M IRR E KA QLY + GFCHLC GQEA VG++ Sbjct: 49 EGPPVTTVLTREDGLKYYKMMQTIRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAG 108 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 + D +IT+YR HG G+ I+AELTGR+ G +KGKGGSMHM++ KN FYGG+G Sbjct: 109 INPTDHVITSYRAHGLSYTRGLTVRSILAELTGRRAGCAKGKGGSMHMYA-KN-FYGGNG 166 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVGAQ LG G+A A KY+ ++++C+ +GDGAANQGQ+ E++N+AALWNL I++ ENN Sbjct: 167 IVGAQGPLGAGVALACKYKGNNEVCLTLYGDGAANQGQISEAYNMAALWNLPCIFICENN 226 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +Y MGTSV RA+A T++ KRG +F IPG++VDGMDI V+ A YCR+ KGPI++E Sbjct: 227 RYGMGTSVDRAAASTDYYKRG-NF-IPGLRVDGMDILCVREATKFAADYCRSGKGPILME 284 Query: 279 MLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 +LTYRY GHSMSDP +YRTREEI +RS DPI ++ ++++N+ AS +LKEI++ VR Sbjct: 285 LLTYRYHGHSMSDPGISYRTREEIQSVRSKSDPIMLLKDKMVNNQLASVEELKEIDVEVR 344 Query: 338 KIINNSVEFAQSDKEPDPAEL 358 K I+++ +FA +D EP EL Sbjct: 345 KEIDDAAQFAMTDPEPPLEEL 365 >gi|4885543|ref|NP_005381.1| pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial precursor [Homo sapiens] gi|266687|sp|P29803|ODPAT_HUMAN RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; AltName: Full=PDHE1-A type II; Flags: Precursor gi|190790|gb|AAA60232.1| pyruvate dehydrogenase complex [Homo sapiens] gi|111185646|gb|AAI19657.1| Pyruvate dehydrogenase (lipoamide) alpha 2 [Homo sapiens] gi|111185648|gb|AAI19658.1| Pyruvate dehydrogenase (lipoamide) alpha 2 [Homo sapiens] gi|121934094|gb|AAI27639.1| Pyruvate dehydrogenase (lipoamide) alpha 2 [Homo sapiens] gi|121934212|gb|AAI27638.1| Pyruvate dehydrogenase (lipoamide) alpha 2 [Homo sapiens] gi|133777220|gb|AAH30697.3| Pyruvate dehydrogenase (lipoamide) alpha 2 [Homo sapiens] gi|189066860|dbj|BAG36600.1| unnamed protein product [Homo sapiens] Length = 388 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 176/348 (50%), Positives = 236/348 (67%), Gaps = 7/348 (2%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQ 71 + L S ++ AT + D+ LE G V+ + + L YR+ML +RR E KA Q Sbjct: 19 RRVLVASRNSSNDATFEIKKCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVRRMELKADQ 78 Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTG 131 LY + GFCHLC GQEA VG++ + D +IT+YR HG G+ I+AELTG Sbjct: 79 LYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVRSILAELTG 138 Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 R+GG +KGKGGSMHM+ TKN FYGG+GIVGAQ LG GIA A KY+ +D+IC+ +GDGA Sbjct: 139 RRGGCAKGKGGSMHMY-TKN-FYGGNGIVGAQGPLGAGIALACKYKGNDEICLTLYGDGA 196 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 ANQGQ+ E+FN+AALW L +++ ENN Y MGTS RA+A ++ KRG +F IPG++VDG Sbjct: 197 ANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAASPDYYKRG-NF-IPGLKVDG 254 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDP 310 MD+ V+ A YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DP Sbjct: 255 MDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKRDP 314 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 I ++ R++++K A+ +LKEI VRK I+++ +FA +D EP EL Sbjct: 315 IIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLEEL 362 >gi|332819831|ref|XP_526637.2| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial [Pan troglodytes] Length = 388 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 174/335 (51%), Positives = 231/335 (68%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ + + L YR+ML +RR E KA QLY + GFCHL Sbjct: 32 ATFEIKKCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVRRMELKADQLYKQKFIRGFCHL 91 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +IT+YR HG G+ I+AELTGR+GG +KGKGGSM Sbjct: 92 CDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVRSILAELTGRRGGCAKGKGGSM 151 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+ TKN FYGG+GIVGAQ LG GIA A KY+ +D+IC+ +GDGAANQGQ+ E+FN+A Sbjct: 152 HMY-TKN-FYGGNGIVGAQGPLGAGIALACKYKGNDEICLTLYGDGAANQGQIAEAFNMA 209 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L +++ ENN Y MGTS RA+A ++ KRG +F IPG++VDGMD+ V+ A Sbjct: 210 ALWKLPCVFICENNLYGMGTSTERAAASPDYYKRG-NF-IPGLKVDGMDVLCVREATKFA 267 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++K Sbjct: 268 ANYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKRDPIIILQDRMVNSKL 327 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 A+ +LKEI VRK I+++ +FA +D EP EL Sbjct: 328 ATVEELKEIGAEVRKEIDDAAQFATTDPEPHLEEL 362 >gi|119626468|gb|EAX06063.1| hCG1643458 [Homo sapiens] Length = 441 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 174/335 (51%), Positives = 231/335 (68%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ + + L YR+ML +RR E KA QLY + GFCHL Sbjct: 85 ATFEIKKCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVRRMELKADQLYKQKFIRGFCHL 144 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +IT+YR HG G+ I+AELTGR+GG +KGKGGSM Sbjct: 145 CDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVRSILAELTGRRGGCAKGKGGSM 204 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+ TKN FYGG+GIVGAQ LG GIA A KY+ +D+IC+ +GDGAANQGQ+ E+FN+A Sbjct: 205 HMY-TKN-FYGGNGIVGAQGPLGAGIALACKYKGNDEICLTLYGDGAANQGQIAEAFNMA 262 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L +++ ENN Y MGTS RA+A ++ KRG +F IPG++VDGMD+ V+ A Sbjct: 263 ALWKLPCVFICENNLYGMGTSTERAAASPDYYKRG-NF-IPGLKVDGMDVLCVREATKFA 320 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++K Sbjct: 321 ANYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKRDPIIILQDRMVNSKL 380 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 A+ +LKEI VRK I+++ +FA +D EP EL Sbjct: 381 ATVEELKEIGAEVRKEIDDAAQFATTDPEPHLEEL 415 >gi|66267554|gb|AAH94760.1| PDHA2 protein [Homo sapiens] Length = 407 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 176/348 (50%), Positives = 236/348 (67%), Gaps = 7/348 (2%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQ 71 + L S ++ AT + D+ LE G V+ + + L YR+ML +RR E KA Q Sbjct: 38 RRVLVASRNSSNDATFEIKKCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVRRMELKADQ 97 Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTG 131 LY + GFCHLC GQEA VG++ + D +IT+YR HG G+ I+AELTG Sbjct: 98 LYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVRSILAELTG 157 Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 R+GG +KGKGGSMHM+ TKN FYGG+GIVGAQ LG GIA A KY+ +D+IC+ +GDGA Sbjct: 158 RRGGCAKGKGGSMHMY-TKN-FYGGNGIVGAQGPLGAGIALACKYKGNDEICLTLYGDGA 215 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 ANQGQ+ E+FN+AALW L +++ ENN Y MGTS RA+A ++ KRG +F IPG++VDG Sbjct: 216 ANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAASPDYYKRG-NF-IPGLKVDG 273 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDP 310 MD+ V+ A YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DP Sbjct: 274 MDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKRDP 333 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 I ++ R++++K A+ +LKEI VRK I+++ +FA +D EP EL Sbjct: 334 IIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLEEL 381 >gi|77748187|gb|AAI06671.1| Pdha1-B-prov protein [Xenopus laevis] Length = 395 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 175/362 (48%), Positives = 241/362 (66%), Gaps = 7/362 (1%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSE--FNKEQELSAYRLMLL 61 A++ VT + +A AT + DI LE ++ +E+ L YR M Sbjct: 16 AQKPVTAVRVMVASRNYADFASEATFDIKKCDIHRLEEEPPTQAVLTREEGLQYYRTMQT 75 Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 IRR E K+ QLY ++ GFCHL GQEA VG++ + D +ITAYR HG+ GV Sbjct: 76 IRRMELKSDQLYKQKIIRGFCHLYDGQEACCVGLESGINPTDHLITAYRAHGYTYTRGVS 135 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 +I+AELTGR+GG +KGKGGSMHM++ KN FYGG+GIVGAQV LG G+A A K+ ++ Sbjct: 136 VKEILAELTGRRGGCAKGKGGSMHMYA-KN-FYGGNGIVGAQVPLGAGVALACKFFGKNE 193 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 IC+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG Sbjct: 194 ICLSLYGDGAANQGQIFETYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDY 253 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREE 300 IPG++VDGMD+ V+ A +CR+ KGPI++E+ TYRY GHSMSDP +YRTREE Sbjct: 254 --IPGLRVDGMDVLCVREATKFAADHCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREE 311 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 I E+RS DPI ++ R+L+N ++ +LKEI++ VRK I + +FA +D EP E+ + Sbjct: 312 IQEVRSKSDPITLLKDRMLNNNLSNVEELKEIDVEVRKEIEEAAQFATTDPEPPLEEIAN 371 Query: 361 DI 362 I Sbjct: 372 HI 373 >gi|297673997|ref|XP_002815025.1| PREDICTED: LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial-like [Pongo abelii] Length = 441 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 174/335 (51%), Positives = 231/335 (68%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ + + L YR+ML +RR E KA QLY + GFCHL Sbjct: 85 ATFEIKKCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVRRMELKADQLYKQKFIRGFCHL 144 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +IT+YR HG G+ I+AELTGR+GG +KGKGGSM Sbjct: 145 CDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVRSILAELTGRRGGCAKGKGGSM 204 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+ TKN FYGG+GIVGAQ LG GIA A KY+ +D+IC+ +GDGAANQGQ+ E+FN+A Sbjct: 205 HMY-TKN-FYGGNGIVGAQGPLGAGIALACKYKGNDEICLTLYGDGAANQGQIAEAFNMA 262 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L +++ ENN Y MGTS RA+A ++ KRG +F IPG++VDGMD+ V+ A Sbjct: 263 ALWKLPCVFICENNLYGMGTSTERAAAIPDYYKRG-NF-IPGLKVDGMDVLCVRDATKFA 320 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++K Sbjct: 321 ADYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKRDPIMILQDRMVNSKL 380 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 A+ +LKEI VRK I+++ +FA +D EP EL Sbjct: 381 ATVEELKEIGAEVRKEIDDAAQFATTDPEPHLEEL 415 >gi|115377722|ref|ZP_01464914.1| pyruvate dehydrogenase E1 component, alpha subunit [Stigmatella aurantiaca DW4/3-1] gi|115365272|gb|EAU64315.1| pyruvate dehydrogenase E1 component, alpha subunit [Stigmatella aurantiaca DW4/3-1] Length = 373 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 159/321 (49%), Positives = 216/321 (67%), Gaps = 1/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 S ++KE L+ YR M LIRRFEE+AGQ YG+G + GFCHL IGQEA VG ++ D Sbjct: 2 ASPYSKELLLTMYRKMYLIRRFEERAGQQYGLGKIAGFCHLYIGQEATAVGAIEAIRPDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M++AYR+HG LA G DA +MAEL GR G SKGKGGSMH+F ++ FYGG+GIVG Q Sbjct: 62 YMLSAYRDHGQPLARGADAGMVMAELFGRGTGYSKGKGGSMHIFDIEHHFYGGYGIVGGQ 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + L G+AFA++YR D++ V FGD AANQG +E+ N+A+ W L VIY+ ENN+Y MG Sbjct: 122 IPLAAGMAFASRYRNEDRVTVCYFGDAAANQGAFHETLNMASKWKLPVIYICENNRYGMG 181 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+V R SA KR V++++ G VDGMD + T+ A YCRA KGP+++E TYR Sbjct: 182 TAVGRTSAVPEMYKRAVAYDMRGEPVDGMDCLKMYETVKDAAEYCRAGKGPVLLEANTYR 241 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGHSM+DPA YR+++E+ E R N DPI +++ L K A E + I+ V+ ++ + Sbjct: 242 FRGHSMADPATYRSKQEVEEERKN-DPIPKIKDYTLKKKLAKEEEFDAIDEEVKAQVDAA 300 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V+FA EP EL+ D ++ Sbjct: 301 VKFADESPEPSLEELWRDTIV 321 >gi|310820663|ref|YP_003953021.1| pyruvate dehydrogenase complex, e1 component [Stigmatella aurantiaca DW4/3-1] gi|309393735|gb|ADO71194.1| Pyruvate dehydrogenase complex, E1 component [Stigmatella aurantiaca DW4/3-1] Length = 386 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 159/321 (49%), Positives = 216/321 (67%), Gaps = 1/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 S ++KE L+ YR M LIRRFEE+AGQ YG+G + GFCHL IGQEA VG ++ D Sbjct: 15 ASPYSKELLLTMYRKMYLIRRFEERAGQQYGLGKIAGFCHLYIGQEATAVGAIEAIRPDD 74 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M++AYR+HG LA G DA +MAEL GR G SKGKGGSMH+F ++ FYGG+GIVG Q Sbjct: 75 YMLSAYRDHGQPLARGADAGMVMAELFGRGTGYSKGKGGSMHIFDIEHHFYGGYGIVGGQ 134 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + L G+AFA++YR D++ V FGD AANQG +E+ N+A+ W L VIY+ ENN+Y MG Sbjct: 135 IPLAAGMAFASRYRNEDRVTVCYFGDAAANQGAFHETLNMASKWKLPVIYICENNRYGMG 194 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+V R SA KR V++++ G VDGMD + T+ A YCRA KGP+++E TYR Sbjct: 195 TAVGRTSAVPEMYKRAVAYDMRGEPVDGMDCLKMYETVKDAAEYCRAGKGPVLLEANTYR 254 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGHSM+DPA YR+++E+ E R N DPI +++ L K A E + I+ V+ ++ + Sbjct: 255 FRGHSMADPATYRSKQEVEEERKN-DPIPKIKDYTLKKKLAKEEEFDAIDEEVKAQVDAA 313 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V+FA EP EL+ D ++ Sbjct: 314 VKFADESPEPSLEELWRDTIV 334 >gi|133777225|gb|AAH66953.2| Pyruvate dehydrogenase (lipoamide) alpha 2 [Homo sapiens] Length = 388 Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 176/348 (50%), Positives = 235/348 (67%), Gaps = 7/348 (2%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQ 71 + L S ++ AT + D+ LE G V+ + + L YR+ML +RR E KA Q Sbjct: 19 RRVLVASRNSSNDATFEIKKCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVRRMELKADQ 78 Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTG 131 LY + GFCHLC GQEA VG++ + D +IT+YR HG G I+AELTG Sbjct: 79 LYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGPSVRSILAELTG 138 Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 R+GG +KGKGGSMHM+ TKN FYGG+GIVGAQ LG GIA A KY+ +D+IC+ +GDGA Sbjct: 139 RRGGCAKGKGGSMHMY-TKN-FYGGNGIVGAQGPLGAGIALACKYKGNDEICLTLYGDGA 196 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 ANQGQ+ E+FN+AALW L +++ ENN Y MGTS RA+A ++ KRG +F IPG++VDG Sbjct: 197 ANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAASPDYYKRG-NF-IPGLKVDG 254 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDP 310 MD+ V+ A YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DP Sbjct: 255 MDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKRDP 314 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 I ++ R++++K A+ +LKEI VRK I+++ +FA +D EP EL Sbjct: 315 IIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLEEL 362 >gi|332216857|ref|XP_003257567.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial-like [Nomascus leucogenys] Length = 391 Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 176/348 (50%), Positives = 237/348 (68%), Gaps = 7/348 (2%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQ 71 + L S ++ AT + D+ LE G V+ + + L YR+ML +RR E KA Q Sbjct: 22 RRVLVASRNSSNDATFEIKQCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVRRMELKADQ 81 Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTG 131 LY + GFCHLC GQEA VG++ + D +IT+YR HG G+ I+AELTG Sbjct: 82 LYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVRSILAELTG 141 Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 R+GG +KGKGGSMHM+ TKN FYGG+GIVGAQ LG GIA A KY+ +D+IC+ +GDGA Sbjct: 142 RRGGCAKGKGGSMHMY-TKN-FYGGNGIVGAQGPLGAGIALACKYKGNDEICLTLYGDGA 199 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 ANQGQ+ E+FN+AALW L +++ ENN YAMGTS RA+A +++ KRG +F IPG++VDG Sbjct: 200 ANQGQMAEAFNMAALWKLPCVFICENNLYAMGTSTERAAASSDYYKRG-NF-IPGLKVDG 257 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDP 310 MD+ V+ A YCR+ KGPI++E+ TYR+ GHSMSDP +YRTREEI E+RS DP Sbjct: 258 MDVLCVREATKFAADYCRSGKGPILMELQTYRFHGHSMSDPGVSYRTREEIQEVRSKRDP 317 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 I ++ R++ +K A+ +LKEI VRK I+++ +FA +D EP EL Sbjct: 318 IMILQDRIVSSKLATVEELKEIGTEVRKEIDDASQFATTDIEPHLEEL 365 >gi|254797140|ref|YP_003081978.1| pyruvate dehydrogenase E1 component, alpha subunit [Neorickettsia risticii str. Illinois] gi|254590365|gb|ACT69727.1| pyruvate dehydrogenase E1 component, alpha subunit [Neorickettsia risticii str. Illinois] Length = 322 Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 167/311 (53%), Positives = 218/311 (70%), Gaps = 4/311 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 LS Y MLLIRRFEE+AGQLY MG + GFCHL IGQEA+ VG++ L + D +IT+YR+H Sbjct: 12 LSLYGKMLLIRRFEERAGQLYSMGEICGFCHLYIGQEAIAVGLEYCLGKEDSIITSYRDH 71 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G +LA G +MAEL GR G S GKGGSMHMF + F+GGHGIVG+QVSLGTGIAF Sbjct: 72 GMMLARGSSTDVMMAELLGRSSGCSAGKGGSMHMFDPERNFFGGHGIVGSQVSLGTGIAF 131 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A KYR S+ + CFGDGA NQGQVYESFN+AALW L V+YV+ENN YAMG+SV A Sbjct: 132 AEKYRESNAVVASCFGDGAINQGQVYESFNMAALWKLPVLYVVENNMYAMGSSVESVCAN 191 Query: 233 TNFSKRGVSFNIPGMQVDGMD-IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 ++ S RG SF IPG +GMD I ++ TM+ AV R+ GP+++E TYR++GHSMSD Sbjct: 192 SSLSNRGESFGIPGYSANGMDLIDVIRVTMN-AVERVRSGSGPVLVEYKTYRFKGHSMSD 250 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 PA+YR++EE++ + DP++ V LL +L ++ V+ I++SV +A++ Sbjct: 251 PASYRSKEEVSSFK-ERDPLKSVETLLLQ-AGVLPSELDRVQKVVKDRISSSVAYARASA 308 Query: 352 EPDPAELYSDI 362 PD A L ++I Sbjct: 309 FPDQANLMTNI 319 >gi|47227197|emb|CAG00559.1| unnamed protein product [Tetraodon nigroviridis] Length = 390 Score = 335 bits (858), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 166/318 (52%), Positives = 223/318 (70%), Gaps = 5/318 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +++ L YR+M +RR E KA QLY ++ GFCHL GQEA VG++ ++ D +I Sbjct: 56 MTRDEGLQYYRIMQTMRRMELKADQLYKQKIIRGFCHLYDGQEACAVGIEAAINLTDHLI 115 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG+ G +IMAELTGR+GGI+KGKGGSMHM+ FYGG+GIVGAQV L Sbjct: 116 TAYRAHGYTYTRGGTVKEIMAELTGRRGGIAKGKGGSMHMYCKH--FYGGNGIVGAQVPL 173 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+A A KY +++CV +GDGAANQGQ++E++N+AALW L I+V ENN+Y MGTSV Sbjct: 174 GAGVALACKYLGKNELCVALYGDGAANQGQIFETYNMAALWKLPAIFVCENNRYGMGTSV 233 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T++ KRG F IPG++VDGMD+ V+ A +CR+ KGPI++E+ TYRY G Sbjct: 234 ERAAASTDYYKRG-EF-IPGIRVDGMDVLCVREATKLAAEHCRSGKGPILMELQTYRYHG 291 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTR+EI E+R DPI ++ R+L N AS +LKEI++ VRK I ++ + Sbjct: 292 HSMSDPGVSYRTRDEIQEVRGKSDPISMLKDRMLSNNMASVEELKEIDVEVRKEIEDAAQ 351 Query: 346 FAQSDKEPDPAELYSDIL 363 FA +D EP +L + I Sbjct: 352 FATTDPEPPLEDLCNHIF 369 >gi|312889947|ref|ZP_07749491.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Mucilaginibacter paludis DSM 18603] gi|311297479|gb|EFQ74604.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Mucilaginibacter paludis DSM 18603] Length = 331 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 157/317 (49%), Positives = 214/317 (67%), Gaps = 1/317 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 K+ L Y MLL+R+FEEKAGQLYG + GFCHL IGQEAV+ G + D MIT Sbjct: 7 TKDTYLHWYESMLLMRKFEEKAGQLYGQQKIRGFCHLYIGQEAVLAGAMSVIRHDDSMIT 66 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR+H H LA G + +MAEL G+ G SKGKGGSMHMF +N FYGGHGIVG Q+ +G Sbjct: 67 AYRDHAHALAKGTHPNAVMAELYGKATGCSKGKGGSMHMFDKENHFYGGHGIVGGQIPMG 126 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIAFANKY D + + GDGA QG + E+FN+A+LW L VI+V ENN YAMGTS++ Sbjct: 127 AGIAFANKYSGRDNVNICYMGDGAVRQGALTETFNMASLWKLPVIFVCENNGYAMGTSLA 186 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R + Q + K G+ ++IP VDGMD AV MD+A+ R GP +EM TYRY+GH Sbjct: 187 RTTIQHDIYKLGLPYDIPSSAVDGMDPVAVHNAMDEAIQRARKGDGPTFLEMRTYRYKGH 246 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDP YRT++E+ ++ DPIE V++ ++ K+A + +E++ ++ I++ SV+F+ Sbjct: 247 SMSDPQKYRTKDEVESYKAK-DPIETVKQTIVAEKYADDKWFEEMDEKIKAIVDESVKFS 305 Query: 348 QSDKEPDPAELYSDILI 364 + P+ +ELY+D+ + Sbjct: 306 EESPWPEASELYTDVYV 322 >gi|291401406|ref|XP_002717019.1| PREDICTED: pyruvate dehydrogenase E1 alpha 2-like [Oryctolagus cuniculus] Length = 391 Score = 332 bits (851), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 165/313 (52%), Positives = 221/313 (70%), Gaps = 5/313 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E L Y++M ++RR E KA QLY + GFCHLC GQEA VG++ + D +I Sbjct: 57 LTREDGLRYYKMMQVVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVI 116 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR HG G+ I+AELTGR+GG +KGKGGSMHM++ KN FYGG+GIVGAQV L Sbjct: 117 TSYRAHGVCYTRGLPVRSILAELTGRRGGCAKGKGGSMHMYA-KN-FYGGNGIVGAQVPL 174 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+A A KY +++IC+ +GDGAANQGQ+ E++N+AALW L I++ ENN Y MGTSV Sbjct: 175 GAGVALACKYMGNNEICLTLYGDGAANQGQIAEAYNMAALWKLPCIFICENNLYGMGTSV 234 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T++ KRG IPG++VDGMDI V+ A YCR+ KGPI++E+ TYRY G Sbjct: 235 ERAAASTDYYKRG--HFIPGLRVDGMDILCVREATRFAANYCRSGKGPILMELQTYRYHG 292 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YR+REEI ++RS DPI ++ R++++K AS +LKEI+ VRK I ++ + Sbjct: 293 HSMSDPGISYRSREEIQKVRSKSDPIMLLQDRMVNSKLASVEELKEIDSEVRKEIEDAAQ 352 Query: 346 FAQSDKEPDPAEL 358 FA +D EP EL Sbjct: 353 FATTDPEPPVEEL 365 >gi|88608016|ref|YP_506677.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Neorickettsia sennetsu str. Miyayama] gi|88600185|gb|ABD45653.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Neorickettsia sennetsu str. Miyayama] Length = 334 Score = 331 bits (849), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 164/330 (49%), Positives = 216/330 (65%), Gaps = 2/330 (0%) Query: 33 CVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVI 92 CV +L + + L Y MLLIRRFEE+AGQLY MG + GFCHL IGQEAV Sbjct: 4 CVFDWYLRCMLLEPLDSSVLLPLYEKMLLIRRFEERAGQLYSMGEICGFCHLYIGQEAVA 63 Query: 93 VGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG 152 VG+ L D +IT+YR+HG +L G +MAEL G+ G S GKGGSMHMF + Sbjct: 64 VGLDYCLKREDSVITSYRDHGMMLVRGSSPDVMMAELLGKSSGCSNGKGGSMHMFDPERN 123 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F+GGHGIVG+QVSLGTGIAFA KYR S+ + CFGDGA NQGQVYESFN+AALW L ++ Sbjct: 124 FFGGHGIVGSQVSLGTGIAFAEKYRDSNAVVASCFGDGAINQGQVYESFNMAALWKLPIL 183 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 YV+ENN YAMG+SV A ++ S RG SF IPG +GMD+ V AV R Sbjct: 184 YVVENNMYAMGSSVESVCANSSLSNRGESFGIPGYSANGMDLMDVIRVTMNAVEGVRGGS 243 Query: 273 GPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 GP+++E TYR++GHSMSDPA+YR++EE++ + DP++ V LL +L+ + Sbjct: 244 GPVLVEYKTYRFKGHSMSDPASYRSKEEVSSFK-ERDPLKSVETLLLQ-AGVLHSELERV 301 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + V+ +++SV +A++ PD A L +D+ Sbjct: 302 QKAVKDQVSSSVAYARASTFPDKASLMTDV 331 >gi|256424432|ref|YP_003125085.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Chitinophaga pinensis DSM 2588] gi|256039340|gb|ACU62884.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Chitinophaga pinensis DSM 2588] Length = 336 Score = 331 bits (849), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 156/320 (48%), Positives = 213/320 (66%), Gaps = 1/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++F KE L Y LMLL+RRFEEKAGQLYGM + GFCHL IGQEA+ G + D+ Sbjct: 9 TKFTKETYLYWYELMLLLRRFEEKAGQLYGMQKIRGFCHLYIGQEAIAAGAMTATKPDDK 68 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 ITAYR+H +A G+ + MAEL G+ G SKGKGGSMH F+ GF+GGHGIVGAQ+ Sbjct: 69 FITAYRDHALAIAKGMTPDECMAELYGKATGCSKGKGGSMHFFAPDKGFFGGHGIVGAQI 128 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G G+AFA +Y+ +D + + FGDGAA QG ++E+FN+A LW L VI++ ENN YAMGT Sbjct: 129 GTGAGLAFAEQYKGTDNVALCFFGDGAARQGMLHETFNMAMLWKLPVIFICENNMYAMGT 188 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R S + K ++++P +DGM V +D+AV RA +GP ++E+ TYRY Sbjct: 189 SVERTSNVLDIYKLANAYDMPSATIDGMSCETVHEGIDRAVKRARAGEGPTLLEIKTYRY 248 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRT+EE+ E + + DPI QV + NKWA++ +++ I V++ + + V Sbjct: 249 RGHSMSDPAKYRTKEEVEEYK-DKDPINQVLATIQKNKWATDAEIEAINDKVKQEVEHCV 307 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FA+ P EL D+ + Sbjct: 308 QFAEESPWPADDELLKDVYV 327 >gi|300770262|ref|ZP_07080141.1| pyruvate dehydrogenase complex E1 component alpha subunit [Sphingobacterium spiritivorum ATCC 33861] gi|300762738|gb|EFK59555.1| pyruvate dehydrogenase complex E1 component alpha subunit [Sphingobacterium spiritivorum ATCC 33861] Length = 331 Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 161/320 (50%), Positives = 210/320 (65%), Gaps = 1/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + KE L Y+ MLL+R+FEEKAGQLYG + GFCHL IGQEAV+ G + D Sbjct: 4 TPITKETYLEWYKSMLLMRKFEEKAGQLYGQQKIRGFCHLYIGQEAVVAGTMSVIGPEDS 63 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR+H H LA GV A MAEL G+ G SKGKGGSMH FS ++ F GGHGIVG Q+ Sbjct: 64 LITAYRDHAHALAKGVSADACMAELYGKATGCSKGKGGSMHFFSKEHKFMGGHGIVGGQI 123 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG GIAFA Y + + V GDGA QG E+ N+A LW L VI+V ENN YAMGT Sbjct: 124 PLGAGIAFAEMYNGTKNVNVCYMGDGAVRQGAFNETLNMAMLWKLPVIFVCENNGYAMGT 183 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R + + K G F++P VDGMD+ AV MD+AV RA +GP +E+ TYRY Sbjct: 184 SVQRTTNMIDIYKMGHGFDMPSAAVDGMDVVAVHNAMDEAVQRARAGEGPTFLEIRTYRY 243 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +GHSMSDPA YRT+EE+ E + DP+ + +L NK+A + E+E +V+K++ +SV Sbjct: 244 KGHSMSDPAKYRTKEELEEYKGR-DPLLSTKHAILENKYADDAWFAEVEADVKKVVEDSV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FA+ PD +E+Y+D+ + Sbjct: 303 KFAEESPYPDASEIYNDVYV 322 >gi|147903533|ref|NP_001087610.1| pyruvate dehydrogenase (lipoamide) alpha 1 [Xenopus laevis] gi|51703691|gb|AAH80995.1| Pdha1-b protein [Xenopus laevis] Length = 400 Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 171/339 (50%), Positives = 232/339 (68%), Gaps = 7/339 (2%) Query: 27 ATSSVDCVDIPFLEGFEVSE--FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + DI LE ++ +E+ L YR M IRR E K+ QLY ++ GFCHL Sbjct: 44 ATFDIKKCDIHRLEEEPPTQAVLTREEGLQYYRTMQTIRRMELKSDQLYKQKIIRGFCHL 103 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 GQEA VG++ + D +ITAYR HG+ GV +I+AELTGR+GG +KGKGGSM Sbjct: 104 YDGQEACCVGLESGINPTDHLITAYRAHGYTYTRGVSVKEILAELTGRRGGCAKGKGGSM 163 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG G+A A K+ ++ICV +GDGAANQGQ++E++N+A Sbjct: 164 HMYA-KN-FYGGNGIVGAQVPLGAGVALACKFFGKNEICVSLYGDGAANQGQIFETYNMA 221 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG IPG++VDGMD+ V+ A Sbjct: 222 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDY--IPGLRVDGMDVLCVREATKFA 279 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 + R+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R+L+N Sbjct: 280 ADHRRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPITLLKDRMLNNNL 339 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++ +LKEI++ VRK I + +FA +D EP E+ + I Sbjct: 340 SNVEELKEIDVEVRKEIEEAAQFATTDPEPPLEEIANHI 378 >gi|227538733|ref|ZP_03968782.1| pyruvate dehydrogenase [Sphingobacterium spiritivorum ATCC 33300] gi|227241242|gb|EEI91257.1| pyruvate dehydrogenase [Sphingobacterium spiritivorum ATCC 33300] Length = 331 Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 161/320 (50%), Positives = 210/320 (65%), Gaps = 1/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + KE L Y+ MLL+R+FEEKAGQLYG + GFCHL IGQEAV+ G + D Sbjct: 4 TPITKETYLEWYKSMLLMRKFEEKAGQLYGQQKIRGFCHLYIGQEAVVAGTMSVIGPEDS 63 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR+H H LA GV A MAEL G+ G SKGKGGSMH FS ++ F GGHGIVG Q+ Sbjct: 64 LITAYRDHAHALAKGVSADACMAELYGKATGCSKGKGGSMHFFSKEHKFMGGHGIVGGQI 123 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG GIAFA Y + + V GDGA QG E+ N+A LW L VI+V ENN YAMGT Sbjct: 124 PLGAGIAFAEMYNGTKNVNVCYMGDGAVRQGAFNETLNMAMLWKLPVIFVCENNGYAMGT 183 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R + + K G F++P VDGMD+ AV MD+AV RA +GP +E+ TYRY Sbjct: 184 SVQRTTNMIDIYKMGHGFDMPSAAVDGMDVVAVHNAMDEAVQRARAGEGPTFLEIRTYRY 243 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +GHSMSDPA YRT+EE+ E + DP+ + +L NK+A + E+E +V+K++ +SV Sbjct: 244 KGHSMSDPAKYRTKEELEEYKGR-DPLLSTKHAILENKYADDAWFAEVEADVKKVVEDSV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FA+ PD +E+Y+D+ + Sbjct: 303 KFAEESPYPDASEIYNDVYV 322 >gi|108761872|ref|YP_630885.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase subunit alpha [Myxococcus xanthus DK 1622] gi|108465752|gb|ABF90937.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, alpha subunit [Myxococcus xanthus DK 1622] Length = 389 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 157/321 (48%), Positives = 216/321 (67%), Gaps = 1/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 S ++KE L YR M LIRRFEE+AGQ Y +G + GFCHL IGQEAV VG +L D Sbjct: 18 ASPYSKELLLDMYRKMYLIRRFEERAGQQYTLGKIAGFCHLYIGQEAVAVGPVEALRPDD 77 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M++AYR+HG LA G DA +MAEL GR G SKGKGGSMH+F ++ FYGG+GIVG Q Sbjct: 78 YMLSAYRDHGQPLARGSDAGMVMAELMGRDTGYSKGKGGSMHIFDIEHHFYGGYGIVGGQ 137 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + L G+AFA++YR D++ V FGD AA+QG ++E+FN+A+ W L VIY+ ENN+Y MG Sbjct: 138 IPLAAGMAFASRYRNEDRVTVCYFGDAAASQGALHETFNMASKWKLPVIYICENNRYGMG 197 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T++SR +A KR ++++ G VDGMD+ A+ + A YCRA KGP+++E TYR Sbjct: 198 TAISRIAAVPEIYKRASAYDMRGEPVDGMDVLAMYEAVKDAAEYCRAGKGPVLLEANTYR 257 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGHSM+DPA YRT++E+ + R DPI ++R +L A + + IE V ++ + Sbjct: 258 FRGHSMADPATYRTKQEVEDERKG-DPIPKLRAYILKQGLAQDDVFESIEAEVNAQVDQA 316 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V+FA EP EL+ D ++ Sbjct: 317 VKFADESPEPSLDELWRDTIV 337 >gi|110640084|ref|YP_680294.1| pyruvate dehydrogenase E1 component subunit alpha [Cytophaga hutchinsonii ATCC 33406] gi|110282765|gb|ABG60951.1| pyruvate dehydrogenase E1 component alpha subunit [Cytophaga hutchinsonii ATCC 33406] Length = 347 Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 156/316 (49%), Positives = 205/316 (64%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F KE L Y M L+R+FEEK GQLYG + GFCHL IGQEA G +L +GD I Sbjct: 22 FTKETYLFWYEKMQLVRKFEEKTGQLYGQQKIKGFCHLYIGQEACAAGAVSALKKGDHYI 81 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HG L G D IMAE+ G+ GISKGKGGSMH+F F GGHGIVG Q+ L Sbjct: 82 TTYRDHGQPLVLGTDPKAIMAEMYGKATGISKGKGGSMHIFDKAVNFAGGHGIVGGQIPL 141 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AFA Y+ +D +CV GDGA QG ++E+FN+A LWN+ VI+VIENN YAMGTSV Sbjct: 142 GAGLAFAEMYKGTDNLCVCYMGDGAVRQGALHETFNLAMLWNIPVIFVIENNGYAMGTSV 201 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S T + G S+++P VD M + V ++ +A R+ GP ++E TYRY+G Sbjct: 202 QRTSNVTELYQIGESYDMPSEAVDAMSVEEVHLSVARAAERARSGGGPTLLEFRTYRYKG 261 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRT+EE+ ++ DPIE+VR +L K A+E DL+ I+ ++ + +V+F Sbjct: 262 HSMSDPAKYRTKEELESYKAQ-DPIEKVRAVILEKKHATEADLEAIDAKIKATVEEAVKF 320 Query: 347 AQSDKEPDPAELYSDI 362 A+ PD +E Y D+ Sbjct: 321 AEESPYPDASEAYKDV 336 >gi|312130768|ref|YP_003998108.1| pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit [Leadbetterella byssophila DSM 17132] gi|311907314|gb|ADQ17755.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Leadbetterella byssophila DSM 17132] Length = 338 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 157/319 (49%), Positives = 209/319 (65%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +++KEQ L Y M+L R+FEEKAGQLYG + GFCHL IGQEA G +L +GD+ Sbjct: 12 KYSKEQYLYWYDSMVLQRKFEEKAGQLYGQQKIRGFCHLYIGQEACSSGSVSALKKGDKY 71 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+HGH LA G D KIMAEL G+ G +KGKGGSMH+F + GF GGHGIVGAQ+ Sbjct: 72 ITAYRDHGHPLALGTDPGKIMAELYGKVTGTTKGKGGSMHIFDKEVGFMGGHGIVGAQIP 131 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G GI FA KY +D +C+ FGDGA QG +E+ N+A W + I+V+ENN YAMGTS Sbjct: 132 MGAGIGFAEKYLGTDNVCICYFGDGAIRQGAFHEALNMAMTWKIPTIFVVENNGYAMGTS 191 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V+R S G +++IP VD MD+ V + +A R +GP +E TYRYR Sbjct: 192 VARTSNVRELYTLGEAYDIPSEAVDAMDVEIVHEAVSRAAERARKGEGPSFLEFKTYRYR 251 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDP YRT+EE+ E + DPIE ++ R+L N A++ +L I+ V+K ++ +V+ Sbjct: 252 GHSMSDPQKYRTKEEVAEWK-QRDPIELIKDRILTNGIATQEELDAIDEKVKKQVDEAVK 310 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ P P E + DI + Sbjct: 311 FAEESPWPKPEEAFEDIYV 329 >gi|327404741|ref|YP_004345579.1| pyruvate dehydrogenase E1 component subunit alpha [Fluviicola taffensis DSM 16823] gi|327320249|gb|AEA44741.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Fluviicola taffensis DSM 16823] Length = 350 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 163/349 (46%), Positives = 216/349 (61%), Gaps = 14/349 (4%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY 73 K A PS + ++A S S+F+KE + Y+ MLL+RRFEEKAGQLY Sbjct: 4 KTASKPSKTTTKSAAKST-------------SKFSKETYIKWYKDMLLMRRFEEKAGQLY 50 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQ 133 GGFCHL IGQEA++ G + D +TAYR+H H + G D +MAEL GR Sbjct: 51 IQQKFGGFCHLYIGQEAIVAGTVSASKPTDSHMTAYRDHAHPIGLGTDVRVLMAELYGRS 110 Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 G SKGKGGSMH F + F GGHGIVGAQ+ +GTG+AFA +Y +D + V GDGA Sbjct: 111 TGCSKGKGGSMHFFDKEKNFMGGHGIVGAQIPMGTGVAFAEQYNGTDNVVFVSMGDGAVR 170 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 QG ++E+FN+A W L VIY+IENN YAMGTSV R + T+ SK G S+ +P V+GM Sbjct: 171 QGALHETFNMAMNWKLPVIYIIENNNYAMGTSVERTTNVTDLSKIGDSYEMPSKSVNGMS 230 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 AV +++AVA R GP ++++ TYRY+GHSMSDP YRT+EE+ E DPIE Sbjct: 231 PEAVHEAIEEAVARARRGDGPSLLDIRTYRYKGHSMSDPQKYRTKEEVAEWM-EQDPIEH 289 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 K + NKW + +++ I+ V+ + SV+FA+ PD +LY DI Sbjct: 290 CLKMIQSNKWLTAKEIEAIDAWVKNEVEESVKFAEESPYPDADDLYEDI 338 >gi|308509166|ref|XP_003116766.1| hypothetical protein CRE_02025 [Caenorhabditis remanei] gi|308241680|gb|EFO85632.1| hypothetical protein CRE_02025 [Caenorhabditis remanei] Length = 415 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 166/317 (52%), Positives = 213/317 (67%), Gaps = 5/317 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 NKE L YR M +IRR E AG LY + GFCHL GQEA VGMK ++TEGD +I Sbjct: 68 LNKEDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMTEGDAVI 127 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG G ++++AELTGR G GKGGSMHM+ TKN FYGG+GIVGAQ L Sbjct: 128 TAYRCHGWTWLLGATVTEVLAELTGRIAGNVHGKGGSMHMY-TKN-FYGGNGIVGAQQPL 185 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+A A KYR +CV +GDGAANQGQ++E+ N+A LW+L V++V ENN + MGT+V Sbjct: 186 GAGVALAMKYREQKNVCVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMGTAV 245 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA T + RG +PG+ VDGMDI AV+ A YC + KGP+++EM TYRY G Sbjct: 246 ERASASTEYYTRGDY--VPGIWVDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYHG 303 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YR+REEI E+R DPI + R++ + A+E +LK I+ VRK ++ +++ Sbjct: 304 HSMSDPGTSYRSREEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEALK 363 Query: 346 FAQSDKEPDPAELYSDI 362 A SD P LY+DI Sbjct: 364 IATSDGVLPPEALYTDI 380 >gi|32564172|ref|NP_871953.1| hypothetical protein T05H10.6 [Caenorhabditis elegans] gi|26985889|emb|CAD59156.1| C. elegans protein T05H10.6b, confirmed by transcript evidence [Caenorhabditis elegans] Length = 414 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 164/317 (51%), Positives = 212/317 (66%), Gaps = 5/317 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 N+E L YR M +IRR E AG LY + GFCHL GQEA VGMK ++TEGD +I Sbjct: 67 LNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMTEGDAVI 126 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG G ++++AELTGR G GKGGSMHM+ TKN FYGG+GIVGAQ L Sbjct: 127 TAYRCHGWTWLLGATVTEVLAELTGRVAGNVHGKGGSMHMY-TKN-FYGGNGIVGAQQPL 184 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+A A KYR +CV +GDGAANQGQ++E+ N+A LW+L V++V ENN + MGT+ Sbjct: 185 GAGVALAMKYREQKNVCVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMGTTA 244 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+SA T + RG +PG+ VDGMDI AV+ A YC + KGP+++EM TYRY G Sbjct: 245 ERSSASTEYYTRGDY--VPGIWVDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYHG 302 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREEI E+R DPI + R++ + A+E +LK I+ VRK ++ +++ Sbjct: 303 HSMSDPGTSYRTREEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEALK 362 Query: 346 FAQSDKEPDPAELYSDI 362 A SD P LY+DI Sbjct: 363 IATSDGVLPPEALYADI 379 >gi|17536047|ref|NP_495693.1| hypothetical protein T05H10.6 [Caenorhabditis elegans] gi|1709447|sp|P52899|ODPA_CAEEL RecName: Full=Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|3879499|emb|CAA87793.1| C. elegans protein T05H10.6a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 397 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 164/317 (51%), Positives = 212/317 (66%), Gaps = 5/317 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 N+E L YR M +IRR E AG LY + GFCHL GQEA VGMK ++TEGD +I Sbjct: 50 LNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMTEGDAVI 109 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG G ++++AELTGR G GKGGSMHM+ TKN FYGG+GIVGAQ L Sbjct: 110 TAYRCHGWTWLLGATVTEVLAELTGRVAGNVHGKGGSMHMY-TKN-FYGGNGIVGAQQPL 167 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+A A KYR +CV +GDGAANQGQ++E+ N+A LW+L V++V ENN + MGT+ Sbjct: 168 GAGVALAMKYREQKNVCVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMGTTA 227 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+SA T + RG +PG+ VDGMDI AV+ A YC + KGP+++EM TYRY G Sbjct: 228 ERSSASTEYYTRGDY--VPGIWVDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYHG 285 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREEI E+R DPI + R++ + A+E +LK I+ VRK ++ +++ Sbjct: 286 HSMSDPGTSYRTREEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEALK 345 Query: 346 FAQSDKEPDPAELYSDI 362 A SD P LY+DI Sbjct: 346 IATSDGVLPPEALYADI 362 >gi|62897537|dbj|BAD96708.1| pyruvate dehydrogenase (lipoamide) alpha 1 variant [Homo sapiens] Length = 390 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 235/335 (70%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 211 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 212 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 269 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 270 AAYCRSGKGPILLELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSSL 329 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 364 >gi|62897039|dbj|BAD96460.1| pyruvate dehydrogenase (lipoamide) alpha 1 variant [Homo sapiens] Length = 390 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 235/335 (70%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 211 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 212 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 269 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 270 AAYCRSGKGPILLELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 329 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 364 >gi|321468559|gb|EFX79543.1| hypothetical protein DAPPUDRAFT_304437 [Daphnia pulex] Length = 399 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 162/317 (51%), Positives = 218/317 (68%), Gaps = 5/317 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +++ L Y+ M +IRR E AG LY ++ GFCHL GQEA VGM+ S+ D +I Sbjct: 57 LSRQDALKYYKDMQMIRRMETAAGNLYKEKIIRGFCHLYSGQEACCVGMRASMRSYDAVI 116 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG GVD + +++ELTGR G +GKGGSMHM+ KN FYGG+GIVGAQ L Sbjct: 117 TAYRAHGWTYMMGVDPAGVLSELTGRSTGCQRGKGGSMHMY-IKN-FYGGNGIVGAQQPL 174 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+A A KY+ +D +C+ +GDGAANQGQ+YE+ NIA LW L VI++ ENN Y MGTSV Sbjct: 175 GAGVALALKYQGTDGVCLTLYGDGAANQGQLYEAMNIAQLWKLPVIFICENNGYGMGTSV 234 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA TN+ RG +PG+ VDGMD+ AV+ A+ +C KGP+++E++TYRY G Sbjct: 235 DRASASTNYYTRGDY--VPGIWVDGMDVLAVREATRFAIDHCATGKGPMVMEVVTYRYSG 292 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YR+R+EI E+R DPI R+RLL A+ +LK+I+ VR++I ++V+ Sbjct: 293 HSMSDPGTSYRSRDEIQEVRQTRDPITGFRERLLSTSLATAEELKDIDQEVRQVIEDAVK 352 Query: 346 FAQSDKEPDPAELYSDI 362 A++DKE EL +DI Sbjct: 353 RAKADKEIGLEELTADI 369 >gi|332224044|ref|XP_003261177.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 3 [Nomascus leucogenys] gi|332224046|ref|XP_003261178.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 4 [Nomascus leucogenys] Length = 428 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 235/335 (70%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 72 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 131 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 132 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 191 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 192 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 249 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 250 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 307 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 308 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 367 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 368 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 402 >gi|291084742|ref|NP_001166925.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 2 precursor [Homo sapiens] gi|148357460|gb|ABQ59099.1| mitochondrial PDHA1 [Homo sapiens] gi|221039426|dbj|BAH11476.1| unnamed protein product [Homo sapiens] Length = 428 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 235/335 (70%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 72 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 131 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 132 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 191 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 192 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 249 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 250 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 307 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 308 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 367 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 368 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 402 >gi|296235078|ref|XP_002762743.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 3 [Callithrix jacchus] Length = 428 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 235/335 (70%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 72 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 131 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 132 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 191 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 192 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 249 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 250 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 307 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 308 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 367 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 368 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 402 >gi|4505685|ref|NP_000275.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 1 precursor [Homo sapiens] gi|332224040|ref|XP_003261175.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 1 [Nomascus leucogenys] gi|129063|sp|P08559|ODPA_HUMAN RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor gi|35379|emb|CAA36933.1| unnamed protein product [Homo sapiens] gi|35381|emb|CAA36934.1| unnamed protein product [Homo sapiens] gi|189738|gb|AAA60050.1| pyruvate dehydrogenase alpha subunit [Homo sapiens] gi|190762|gb|AAA36533.1| pyruvate dehydrogenase alpha subunit precursor (EC 1.2.4.1) [Homo sapiens] gi|219982|dbj|BAA14121.1| pyruvate dehydrogenase alpha subunit [Homo sapiens] gi|292413|gb|AAA60227.1| pyruvate dehydrogenase E1-alpha subunit [Homo sapiens] gi|387009|gb|AAA60051.1| pyruvate dehydrogenase E1-alpha subunit [Homo sapiens] gi|12803199|gb|AAH02406.1| Pyruvate dehydrogenase (lipoamide) alpha 1 [Homo sapiens] gi|57209621|emb|CAI41291.1| pyruvate dehydrogenase (lipoamide) alpha 1 [Homo sapiens] gi|119619366|gb|EAW98960.1| pyruvate dehydrogenase (lipoamide) alpha 1, isoform CRA_a [Homo sapiens] gi|119619367|gb|EAW98961.1| pyruvate dehydrogenase (lipoamide) alpha 1, isoform CRA_a [Homo sapiens] gi|123981924|gb|ABM82791.1| pyruvate dehydrogenase (lipoamide) alpha 1 [synthetic construct] gi|123996757|gb|ABM85980.1| pyruvate dehydrogenase (lipoamide) alpha 1 [synthetic construct] gi|123996763|gb|ABM85983.1| pyruvate dehydrogenase (lipoamide) alpha 1 [synthetic construct] Length = 390 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 235/335 (70%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 211 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 212 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 269 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 270 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 329 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 364 >gi|198425570|ref|XP_002131120.1| PREDICTED: similar to pyruvate dehydrogenase (lipoamide) alpha 1 [Ciona intestinalis] Length = 385 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 170/344 (49%), Positives = 229/344 (66%), Gaps = 14/344 (4%) Query: 27 ATSSVDCVDIPFLEGFEVSE--FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + +D LE +E NK+ +S Y M +IRR E KA QLY ++ GFCHL Sbjct: 28 ATFPIKPIDTHKLENTPATEVQINKDDAISYYTKMQIIRRMELKADQLYKQKIIRGFCHL 87 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 GQEA G++ SLT D +ITAYR HG GV I+AEL GR+ G +KGKGGSM Sbjct: 88 YDGQEACCAGIEASLTPKDDVITAYRAHGWAYIRGVPVCNILAELFGRKLGCAKGKGGSM 147 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+S KN FYGG+GIVGAQV LG GIAFA+KYR SD + V C+GDGAANQGQ++ESFN++ Sbjct: 148 HMYS-KN-FYGGNGIVGAQVPLGAGIAFAHKYRNSDTVTVACYGDGAANQGQIFESFNMS 205 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 LW L I+V ENN+Y MGTSV RASA T++ RG IPG++VDGMD+ AV+ +A Sbjct: 206 QLWKLPAIFVCENNRYGMGTSVERASASTDYFTRGDY--IPGLRVDGMDVLAVR----EA 259 Query: 265 VAYCRAH---KGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLH 320 + + H +GPI++E++TYRY GHSMSDP +YRTR+E+ E+R N DPI R++++ Sbjct: 260 TRFAKEHAVKEGPILMELVTYRYHGHSMSDPGTSYRTRDEVKEIRQNLDPIMNFREKIIS 319 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 + ++ D+ I+ V++ + N A + EPD ++ DI + Sbjct: 320 AGFVTKQDVATIDAEVKQHVENETAKALASTEPDFDQIACDIYV 363 >gi|301758976|ref|XP_002915337.1| PREDICTED: LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like [Ailuropoda melanoleuca] Length = 391 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 162/321 (50%), Positives = 218/321 (67%), Gaps = 6/321 (1%) Query: 40 EGFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 EG V+ +E L YR+M IRR E KA Q Y + GFCHLC GQEA VG++ Sbjct: 49 EGPPVTTVLTREDGLKYYRMMQTIRRMELKADQXYKQKFIRGFCHLCDGQEACCVGLEAG 108 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 + D +IT+YR HG G+ I+AELTGR+GG +K KGGSMHM++ KN FYGG+G Sbjct: 109 INPTDHVITSYRAHGLCYTRGLSVPSILAELTGRRGGCAKCKGGSMHMYA-KN-FYGGNG 166 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVGAQ LG GIA A KY+ + ++C+ +GDGAANQGQ+ E+FN+AALW L +++ ENN Sbjct: 167 IVGAQAPLGAGIALACKYKGNKEVCLTVYGDGAANQGQIAEAFNMAALWKLPCVFICENN 226 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 MGT+ RA+A T++ KRG IPG++VDGMD+ V+ A YCR+ KGPI++E Sbjct: 227 LDGMGTAAERAAASTDYYKRG--HFIPGLRVDGMDVLCVREATKFATDYCRSEKGPIVME 284 Query: 279 MLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 + TYRY GHSMSDP +YRTR+EI +RS DPI ++ R++++K A+ + KEI++ VR Sbjct: 285 LQTYRYHGHSMSDPGISYRTRQEIQNVRSKSDPIMLLKDRMVNSKLATIEEFKEIDVEVR 344 Query: 338 KIINNSVEFAQSDKEPDPAEL 358 K I+N+ FA +D EP EL Sbjct: 345 KEIDNAAHFAITDPEPPLEEL 365 >gi|266686|sp|P29804|ODPA_PIG RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor gi|1851|emb|CAA37180.1| pyruvate dehydrogenase (lipoamide) [Sus scrofa domesticus] Length = 389 Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 170/313 (54%), Positives = 224/313 (71%), Gaps = 5/313 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E L YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +I Sbjct: 55 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 114 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG G+ +I+AELTGR+GG KGKGGSMHM++ KN FYGG+GIVGAQV L Sbjct: 115 TAYRAHGFTFTRGLSVREILAELTGRRGGCGKGKGGSMHMYA-KN-FYGGNGIVGAQVPL 172 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIA A KY D++C+ +GDGAANQGQ++E++N+AALW L +++ ENN+Y MGTSV Sbjct: 173 GAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCVFICENNRYGMGTSV 232 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T++ KRG F IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY G Sbjct: 233 ERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHG 290 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ + Sbjct: 291 HSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQ 350 Query: 346 FAQSDKEPDPAEL 358 FA +D EP EL Sbjct: 351 FATADPEPPLEEL 363 >gi|387011|gb|AAA60055.1| pyruvate dehydrogenase E1-alpha precursor [Homo sapiens] Length = 414 Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 234/335 (69%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 58 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 117 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 118 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 177 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 178 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 235 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 236 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 293 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 294 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 353 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I + +FA +D EP EL Sbjct: 354 ASVEELKEIDVEVRKEIEDPAQFAAADPEPPLEEL 388 >gi|157109492|ref|XP_001650696.1| pyruvate dehydrogenase [Aedes aegypti] gi|108879026|gb|EAT43251.1| pyruvate dehydrogenase [Aedes aegypti] Length = 422 Score = 322 bits (824), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 159/316 (50%), Positives = 214/316 (67%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 K+ L Y M IRR E AG LY ++ GFCHL GQEA VGM+ ++ D IT Sbjct: 81 TKDDALKYYSQMYAIRRMETAAGNLYKEKIIRGFCHLYSGQEACAVGMRAAMRPEDSCIT 140 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG GV ++AELTGRQ G ++GKGGSMHM+S + FYGG+GIVGAQV LG Sbjct: 141 AYRCHGWTYLMGVSMQGVLAELTGRQSGCARGKGGSMHMYS--HNFYGGNGIVGAQVPLG 198 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIAFA KY+ + +C+ +GDGAANQGQ++E +N+A LWN VI+V ENN Y MGTS Sbjct: 199 VGIAFAAKYKGTKGVCIAAYGDGAANQGQLFEVYNMAKLWNTPVIFVCENNGYGMGTSAE 258 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RASA N+ RG + +PG+ VDGMD+ AV+ A+ +C + KGPI++E TYRY GH Sbjct: 259 RASANVNYYTRGDT--VPGIWVDGMDVLAVREATKFAIDHCNSGKGPILLETATYRYSGH 316 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YR+R+EI E+R DPI +R+++L N+ A+ +LKEIE +R ++++ + Sbjct: 317 SMSDPGTSYRSRDEIAEVRQTRDPITSLREKILTNELATTEELKEIESKIRGEVDSATKV 376 Query: 347 AQSDKEPDPAELYSDI 362 A++D+E EL +DI Sbjct: 377 AKADREIPVDELCTDI 392 >gi|215261326|pdb|3EXE|A Chain A, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261328|pdb|3EXE|C Chain C, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261330|pdb|3EXE|E Chain E, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261332|pdb|3EXE|G Chain G, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex Length = 382 Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 178/335 (53%), Positives = 235/335 (70%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 26 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 85 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 86 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 145 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 146 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 203 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 204 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 261 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 262 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 321 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 322 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 356 >gi|332667473|ref|YP_004450261.1| pyruvate dehydrogenase E1 component subunit alpha [Haliscomenobacter hydrossis DSM 1100] gi|332336287|gb|AEE53388.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Haliscomenobacter hydrossis DSM 1100] Length = 345 Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 150/315 (47%), Positives = 215/315 (68%), Gaps = 1/315 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++KEQ L Y LML IRRFEE+A +YG + GFCH+ IGQEA+ G++ ++T+ D ++ Sbjct: 20 YSKEQYLFWYELMLRIRRFEERALMMYGQQKIRGFCHVYIGQEAIAAGIESAITKQDGIV 79 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR+HG L GV + ++MAEL G+ GI KGKGGSMH F +N ++GG+GIVGAQ+ + Sbjct: 80 TAYRQHGIALGRGVTSREVMAELYGKSTGIVKGKGGSMHFFDARNKYFGGNGIVGAQIPI 139 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTGI FA KY+ + CV FGDGA+ QG +YESFN+A W L V+Y++ENN YAMGTSV Sbjct: 140 GTGIGFAEKYKGTQNFCVTMFGDGASRQGALYESFNMAMTWKLPVLYIVENNGYAMGTSV 199 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S K G+SF +P VDGM +V + +A + RA KGP +E+ TYRY+G Sbjct: 200 ERTSNVEELWKIGLSFEMPSESVDGMSPESVHEAISRAAEHIRAGKGPYFLEIRTYRYKG 259 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS+SDPA YRT+EE+ + + DPI+ +++ K A+ +++ I+ ++ I ++V+F Sbjct: 260 HSVSDPAKYRTKEEVQAYQ-DRDPIKVTEDKIVSGKIATAEEIQAIKDKIKAEIEDAVQF 318 Query: 347 AQSDKEPDPAELYSD 361 A+ PD +EL++D Sbjct: 319 AEDSPYPDASELFTD 333 >gi|157109490|ref|XP_001650695.1| pyruvate dehydrogenase [Aedes aegypti] gi|108879025|gb|EAT43250.1| pyruvate dehydrogenase [Aedes aegypti] Length = 398 Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 159/316 (50%), Positives = 214/316 (67%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 K+ L Y M IRR E AG LY ++ GFCHL GQEA VGM+ ++ D IT Sbjct: 57 TKDDALKYYSQMYAIRRMETAAGNLYKEKIIRGFCHLYSGQEACAVGMRAAMRPEDSCIT 116 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG GV ++AELTGRQ G ++GKGGSMHM+S + FYGG+GIVGAQV LG Sbjct: 117 AYRCHGWTYLMGVSMQGVLAELTGRQSGCARGKGGSMHMYS--HNFYGGNGIVGAQVPLG 174 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIAFA KY+ + +C+ +GDGAANQGQ++E +N+A LWN VI+V ENN Y MGTS Sbjct: 175 VGIAFAAKYKGTKGVCIAAYGDGAANQGQLFEVYNMAKLWNTPVIFVCENNGYGMGTSAE 234 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RASA N+ RG + +PG+ VDGMD+ AV+ A+ +C + KGPI++E TYRY GH Sbjct: 235 RASANVNYYTRGDT--VPGIWVDGMDVLAVREATKFAIDHCNSGKGPILLETATYRYSGH 292 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YR+R+EI E+R DPI +R+++L N+ A+ +LKEIE +R ++++ + Sbjct: 293 SMSDPGTSYRSRDEIAEVRQTRDPITSLREKILTNELATTEELKEIESKIRGEVDSATKV 352 Query: 347 AQSDKEPDPAELYSDI 362 A++D+E EL +DI Sbjct: 353 AKADREIPVDELCTDI 368 >gi|290561755|gb|ADD38275.1| Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [Lepeophtheirus salmonis] Length = 386 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 163/321 (50%), Positives = 215/321 (66%), Gaps = 5/321 (1%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E S +E+ L+ Y M +RR E AG LY V GFCHL GQEA+ +GMK +L Sbjct: 41 EQSVLTREEGLNYYESMFTVRRLENAAGNLYKEKAVRGFCHLSSGQEAISIGMKAALRPV 100 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D +IT+YR HG GV +++AELTG++ G+ +GKGGSMHM++ KN FYGG+GIVGA Sbjct: 101 DAIITSYRAHGFAYMMGVSVLEVLAELTGKKSGVVRGKGGSMHMYA-KN-FYGGNGIVGA 158 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV LG GIAFA KY+ + +GDGAA QGQVYE++N+A LW+L VI+V ENN Y M Sbjct: 159 QVPLGAGIAFAQKYKEDGGVTYALYGDGAAQQGQVYEAYNMAKLWDLPVIFVCENNHYGM 218 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTS RA+A T+F RG IPG+ VDGMD+ AV+ AV YC + KGP++ E+ TY Sbjct: 219 GTSQDRAAASTDFYTRGDY--IPGVLVDGMDVIAVREACKFAVDYCGSGKGPLVFEIATY 276 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP +YRTREE+ E+R DPI +R +++ + +LK IE +RK I+ Sbjct: 277 RYHGHSMSDPGTSYRTREEVQEIRQTQDPITGLRDKMIDSGLVVPEELKAIEQKIRKNID 336 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 V+ A++D E D +ELY D+ Sbjct: 337 GIVKLAKTDPEIDFSELYYDV 357 >gi|215261382|pdb|3EXI|A Chain A, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex With The Subunit-Binding Domain (Sbd) Of E2p, But Sbd Cannot Be Modeled Into The Electron Density Length = 382 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 177/335 (52%), Positives = 235/335 (70%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 26 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 85 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITA+R HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 86 CDGQEACCVGLEAGINPTDHLITAFRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 145 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 146 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 203 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 204 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 261 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 262 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 321 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 322 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 356 >gi|189053388|dbj|BAG35194.1| unnamed protein product [Homo sapiens] Length = 390 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 177/335 (52%), Positives = 234/335 (69%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 211 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 212 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 269 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ K PI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 270 AAYCRSGKEPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 329 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 364 >gi|149242791|pdb|2OZL|A Chain A, Human Pyruvate Dehydrogenase S264e Variant gi|149242793|pdb|2OZL|C Chain C, Human Pyruvate Dehydrogenase S264e Variant Length = 365 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 170/313 (54%), Positives = 224/313 (71%), Gaps = 5/313 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E L YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +I Sbjct: 31 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 90 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG G+ +I+AELTGR+GG +KGKGGSMHM++ KN FYGG+GIVGAQV L Sbjct: 91 TAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYA-KN-FYGGNGIVGAQVPL 148 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIA A KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV Sbjct: 149 GAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 208 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T++ KRG F IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY G Sbjct: 209 ERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHG 266 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 H MSDP +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ + Sbjct: 267 HEMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQ 326 Query: 346 FAQSDKEPDPAEL 358 FA +D EP EL Sbjct: 327 FATADPEPPLEEL 339 >gi|284040344|ref|YP_003390274.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Spirosoma linguale DSM 74] gi|283819637|gb|ADB41475.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Spirosoma linguale DSM 74] Length = 352 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 153/316 (48%), Positives = 206/316 (65%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE+ + Y M L R+FEEKAGQLYG + GFCHL IGQEA G +LT+ D+ ITA Sbjct: 29 KERYMYWYESMQLQRKFEEKAGQLYGQQKIRGFCHLYIGQEACSSGSFTALTKDDKWITA 88 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HG +A G D IMAEL +Q G SKGKGGSMH+F F GGHGIVGAQ+ +G Sbjct: 89 YRDHGIPIALGSDPKAIMAELFAKQTGSSKGKGGSMHIFDKSVNFIGGHGIVGAQIPMGA 148 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 GIAF+ KY ++ +C+ GDGA QG ++E+FN+A LW L VI+V+ENN YAMGTSV R Sbjct: 149 GIAFSEKYNKTGNLCITFMGDGAVRQGALHEAFNMAMLWKLPVIFVVENNGYAMGTSVER 208 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 S T+ ++++P VD M + AV + +A RA +GP +E TYRYRGHS Sbjct: 209 TSNVTDLYTLAEAYDMPSEPVDAMSVEAVHEAVSRAAERARAGEGPTFLEFRTYRYRGHS 268 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDP YR++EE+ + + DPIEQV+ +L +A+E DL I+ ++ I++ SV+FA+ Sbjct: 269 MSDPQKYRSKEEVEKYKMR-DPIEQVKATILEKGFATEDDLNAIDQKIKGIVDESVKFAE 327 Query: 349 SDKEPDPAELYSDILI 364 P P E + D+ + Sbjct: 328 ESPYPAPEEAFKDVYM 343 >gi|215261334|pdb|3EXF|A Chain A, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261336|pdb|3EXF|C Chain C, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261338|pdb|3EXF|E Chain E, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261340|pdb|3EXF|G Chain G, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261342|pdb|3EXG|A Chain A, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261344|pdb|3EXG|C Chain C, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261346|pdb|3EXG|E Chain E, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261348|pdb|3EXG|G Chain G, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261350|pdb|3EXG|I Chain I, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261352|pdb|3EXG|K Chain K, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261354|pdb|3EXG|M Chain M, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261356|pdb|3EXG|O Chain O, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261358|pdb|3EXG|Q Chain Q, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261360|pdb|3EXG|S Chain S, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261362|pdb|3EXG|U Chain U, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261364|pdb|3EXG|W Chain W, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261366|pdb|3EXG|Y Chain Y, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261368|pdb|3EXG|1 Chain 1, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261370|pdb|3EXG|3 Chain 3, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261372|pdb|3EXG|5 Chain 5, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261374|pdb|3EXH|A Chain A, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261378|pdb|3EXH|E Chain E, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex Length = 382 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 177/335 (52%), Positives = 234/335 (69%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 26 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 85 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 86 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 145 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 146 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 203 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGT+V RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 204 ALWKLPCIFICENNRYGMGTAVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 261 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP YRTREEI E+RS DPI ++ R++++ Sbjct: 262 AAYCRSGKGPILMELQTYRYHGHSMSDPGVAYRTREEIQEVRSKSDPIMLLKDRMVNSNL 321 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 322 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 356 >gi|197099370|ref|NP_001127663.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor [Pongo abelii] gi|62510771|sp|Q5R490|ODPA_PONAB RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor gi|55733496|emb|CAH93426.1| hypothetical protein [Pongo abelii] Length = 390 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 177/335 (52%), Positives = 234/335 (69%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++ ++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFGAYNMA 211 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 212 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 269 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 270 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 329 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 364 >gi|189339284|ref|NP_001104283.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor [Pan troglodytes] gi|158514246|sp|A5A6L0|ODPA_PANTR RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor gi|146741454|dbj|BAF62383.1| pyruvate dehydrogenase alpha 1 [Pan troglodytes verus] Length = 390 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 177/335 (52%), Positives = 234/335 (69%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 211 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 212 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 269 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMS P +YRTREEI E+RS DPI ++ R++++ Sbjct: 270 AAYCRSGKGPILMELQTYRYHGHSMSGPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 329 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 364 >gi|170036247|ref|XP_001845976.1| pyruvate dehydrogenase [Culex quinquefasciatus] gi|167878853|gb|EDS42236.1| pyruvate dehydrogenase [Culex quinquefasciatus] Length = 398 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 159/316 (50%), Positives = 212/316 (67%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 K++ L Y M IRR E AG LY ++ GFCHL GQEA VGM+ ++ D IT Sbjct: 57 TKDEALRYYGQMYAIRRMETAAGNLYKEKIIRGFCHLYSGQEACAVGMRAAMRPEDSCIT 116 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG GV ++AELTGRQ G ++GKGGSMHM++ N FYGG+GIVGAQV LG Sbjct: 117 AYRCHGWTYLMGVSMQGVLAELTGRQSGCARGKGGSMHMYT--NNFYGGNGIVGAQVPLG 174 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIAFA KY + +C+ +GDGAANQGQ++E +N+A LWN I+V ENN Y MGTS Sbjct: 175 VGIAFAAKYNGTKGVCIAAYGDGAANQGQIFEVYNMAKLWNAPCIFVCENNGYGMGTSAE 234 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RASA N+ RG + +PG+ VDGMD+ AV+ A+ +C + KGPI++E TYRY GH Sbjct: 235 RASANVNYYTRGDA--VPGIWVDGMDVLAVREATRFAIEHCNSGKGPILLETATYRYSGH 292 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YR+R+EI E+R DPI +R+++L N+ A+ +LKEIE +R ++ + + Sbjct: 293 SMSDPGTSYRSRDEIAEVRQTRDPITSLREKILTNELATTEELKEIESKLRGEVDAATKV 352 Query: 347 AQSDKEPDPAELYSDI 362 A++DKE EL +DI Sbjct: 353 AKADKEIAVEELVTDI 368 >gi|225713922|gb|ACO12807.1| Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor [Lepeophtheirus salmonis] gi|290462061|gb|ADD24078.1| Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [Lepeophtheirus salmonis] Length = 386 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 163/321 (50%), Positives = 214/321 (66%), Gaps = 5/321 (1%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E S +E+ L+ Y M +RR E AG LY V GFCHL GQEA+ +GMK +L Sbjct: 41 EQSVLTREEGLNYYESMFTVRRLENAAGNLYKEKAVRGFCHLSSGQEAISIGMKAALRPV 100 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D +IT+YR HG GV ++AELTG++ G+ +GKGGSMHM++ KN FYGG+GIVGA Sbjct: 101 DAIITSYRAHGFAYMMGVSVLGVLAELTGKKSGVVRGKGGSMHMYA-KN-FYGGNGIVGA 158 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV LG GIAFA KY+ + +GDGAA QGQVYE++N+A LW+L VI+V ENN Y M Sbjct: 159 QVPLGAGIAFAQKYKEDGGVTYALYGDGAAQQGQVYEAYNMAKLWDLPVIFVCENNHYGM 218 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTS RA+A T+F RG IPG+ VDGMD+ AV+ AV YC + KGP++ E+ TY Sbjct: 219 GTSQDRAAASTDFYTRGDY--IPGVLVDGMDVIAVREACKFAVDYCGSGKGPLVFEIATY 276 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP +YRTREE+ E+R DPI +R +++ + +LK IE +RK I+ Sbjct: 277 RYHGHSMSDPGTSYRTREEVQEIRQTQDPITGLRDKMIDSGLVVPEELKAIEQKIRKNID 336 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 V+ A++D E D +ELY D+ Sbjct: 337 GIVKLAKTDPEIDFSELYYDV 357 >gi|322780442|gb|EFZ09930.1| hypothetical protein SINV_11234 [Solenopsis invicta] Length = 379 Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 160/315 (50%), Positives = 218/315 (69%), Gaps = 5/315 (1%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 ++ + ++ + IRR E AG LY +V GFCHL GQEA VGMK ++ D +ITA Sbjct: 40 RDDAIKYFKQLHTIRRMETAAGNLYKEKIVRGFCHLYSGQEACAVGMKAAMRSQDAVITA 99 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR HG G+D + AELTGRQGG +KGKGGSMHM+S KN FYGG+GIVGAQV LG Sbjct: 100 YRAHGWTYLMGIDVFGVFAELTGRQGGNAKGKGGSMHMYS-KN-FYGGNGIVGAQVPLGV 157 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 GIAFA KY + +C+ +GDGAANQGQV+E++N+A LW++ I+V ENN Y MGTSV R Sbjct: 158 GIAFAQKYLNNGGVCLTLYGDGAANQGQVFEAYNMAKLWDVPCIFVCENNGYGMGTSVDR 217 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASA T++ RG IPG+ VDGMD+ AV+ A+ +C + KGPI++E +TYRY GHS Sbjct: 218 ASASTDYYTRGDY--IPGIWVDGMDVLAVREATRFAIEHCTSGKGPIVMETVTYRYSGHS 275 Query: 289 MSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 MSDP +YRTREE+ E+R DP+ ++R+L+ + ++K IE +RK ++++++ A Sbjct: 276 MSDPGTSYRTREEVQEVRQTRDPLTSFKERILNVNLVTAEEIKTIESEIRKSVDDAMKAA 335 Query: 348 QSDKEPDPAELYSDI 362 ++DKE EL +DI Sbjct: 336 KNDKEIPLNELTADI 350 >gi|307193004|gb|EFN75992.1| Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [Harpegnathos saltator] Length = 379 Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 157/316 (49%), Positives = 220/316 (69%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++ ++ +R + +IRR E AG LY ++ GFCHL GQEA VGMK ++ D +IT Sbjct: 39 TRDDAIALFRQLHMIRRMETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRPQDCVIT 98 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG G+D +++ELTGRQGG ++GKGGSMHM+S KN FYGG+GIVGAQV LG Sbjct: 99 AYRAHGWTYLMGIDTFGVLSELTGRQGGNARGKGGSMHMYS-KN-FYGGNGIVGAQVPLG 156 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIA A+KY + +C+ +GDGAANQGQV+E +N+A LW++ I+V ENN Y MGTSV Sbjct: 157 VGIALAHKYLNTGGVCLALYGDGAANQGQVFEVYNMAKLWDVPCIFVCENNGYGMGTSVE 216 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RASA T++ RG +PG+ VDGMD+ AV+ A+ YC + KGP+++E +TYRY GH Sbjct: 217 RASANTDYYTRGDY--VPGIWVDGMDVLAVREATKFAIDYCTSGKGPMVMETVTYRYSGH 274 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YRTREE+ E+R DP+ ++R+L+ + ++K IE +RK +++ V+ Sbjct: 275 SMSDPGTSYRTREEVQEVRQTRDPLTSFKERILNANLVTADEIKTIEGEIRKKVDDGVKA 334 Query: 347 AQSDKEPDPAELYSDI 362 A++DKE +EL +DI Sbjct: 335 AKADKEIPLSELTADI 350 >gi|224042713|ref|XP_002196835.1| PREDICTED: pyruvate dehydrogenase (lipoamide) alpha 1 [Taeniopygia guttata] Length = 396 Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 171/312 (54%), Positives = 224/312 (71%), Gaps = 5/312 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +E+ L Y+ M IRR E K+ QLY ++ GFCHL GQEA VG++ ++ D +IT Sbjct: 63 TREEGLHYYKSMQTIRRMELKSDQLYKQKIIRGFCHLYDGQEACCVGIEAAIKPTDHVIT 122 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG GV +I+AELTGR+GG +KGKGGSMHM+ TKN FYGG+GIVGAQV LG Sbjct: 123 AYRAHGFTFTRGVPVREILAELTGRKGGCAKGKGGSMHMY-TKN-FYGGNGIVGAQVPLG 180 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIA A KY ++ICV +GDGAANQGQ++E++N+AALW L I+V ENN+Y MGTSV Sbjct: 181 AGIALACKYYDKNEICVALYGDGAANQGQIFETYNMAALWKLPCIFVCENNRYGMGTSVE 240 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RA+A T++ KRG + IPG++VDGMDI V+ + A YCR+ KGP+++E+ TYRY GH Sbjct: 241 RAAASTDYYKRG--YFIPGLRVDGMDILCVREAVKFAAEYCRSGKGPLVMELQTYRYHGH 298 Query: 288 SMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YRTREEI E+RS DPI ++ R+++N AS +LKEI++ VRK I + +F Sbjct: 299 SMSDPGISYRTREEIQEVRSKSDPITLLKDRMVNNNLASVEELKEIDVAVRKEIEEAAQF 358 Query: 347 AQSDKEPDPAEL 358 A +D EP EL Sbjct: 359 ATTDPEPPLEEL 370 >gi|313676600|ref|YP_004054596.1| pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit [Marivirga tractuosa DSM 4126] gi|312943298|gb|ADR22488.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Marivirga tractuosa DSM 4126] Length = 339 Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 152/316 (48%), Positives = 209/316 (66%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F+KE + ++ M L+RRFEEK+GQLYG + GFCHL IGQEA + G +L +GD+ I Sbjct: 14 FDKETYMEWFKSMTLMRRFEEKSGQLYGQQKISGFCHLYIGQEACVAGAVSALKKGDKYI 73 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR+H H + G D +MAEL G++ G+SKGKGGSMHMF +N F+GGHGIVG Q+ L Sbjct: 74 TAYRDHAHPIGLGTDPKYVMAELFGKETGVSKGKGGSMHMFDKENHFFGGHGIVGGQIPL 133 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIAF+ +Y+ +D +C+ GDGA QG +E+ N+A L VI+ IENN YAMGTSV Sbjct: 134 GAGIAFSEQYKGTDNVCITYMGDGAVRQGAFHEALNMAMSMKLPVIFAIENNGYAMGTSV 193 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S T G ++++P VD M++ V + +A R GP ++E TYRY+G Sbjct: 194 KRTSNVTELHTLGEAYDMPSKGVDAMNVENVHNAVAEAAERARKGDGPTLLEFRTYRYKG 253 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRT+EE+ E + DPIEQ R+ +L NK+A+E +LKEI+ ++ + V+F Sbjct: 254 HSMSDPAKYRTKEELEEYKGK-DPIEQAREVILKNKYATEDELKEIDNAAKEQVKECVKF 312 Query: 347 AQSDKEPDPAELYSDI 362 A+ P E+Y D+ Sbjct: 313 AEESDFPHVDEVYRDV 328 >gi|149638286|ref|XP_001514100.1| PREDICTED: similar to pyruvate dehydrogenase (lipoamide) alpha [Ornithorhynchus anatinus] Length = 568 Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 169/321 (52%), Positives = 226/321 (70%), Gaps = 6/321 (1%) Query: 40 EGFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 EG V+ +E+ L YR M IRR E KA QLY ++ GFCHL GQEA VG++ Sbjct: 226 EGPPVTTVLTREEGLKYYRTMQTIRRMELKADQLYKQKIIRGFCHLYDGQEACCVGLEAG 285 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 + D +ITAYR HG+ G+ +I+AELTGR+GG +KGKGGSMHM++ N FYGG+G Sbjct: 286 INPTDHVITAYRAHGYTYTRGLAVREILAELTGRKGGCAKGKGGSMHMYA--NNFYGGNG 343 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN Sbjct: 344 IVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENN 403 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +Y MGTSV RA+A T++ KRG IPG++VDGMDI V+ A A+CR+ KGP+++E Sbjct: 404 RYGMGTSVERAAASTDYYKRGDY--IPGIRVDGMDILCVREATKFAAAHCRSGKGPMLME 461 Query: 279 MLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 + TYRY GHSMSDP +YRTREEI E+RS DPI ++ R+++N + +LKEI++ VR Sbjct: 462 LQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPITLLKDRMVNNNLTTVEELKEIDVEVR 521 Query: 338 KIINNSVEFAQSDKEPDPAEL 358 K I ++ +FA +D EP EL Sbjct: 522 KEIEDAAQFATTDPEPPLEEL 542 >gi|332020438|gb|EGI60858.1| Putative pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [Acromyrmex echinatior] Length = 396 Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 160/315 (50%), Positives = 217/315 (68%), Gaps = 5/315 (1%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 ++ + ++ + IRR E AG LY ++ GFCHL GQEA VGMK ++ D +ITA Sbjct: 57 RDDAIELFKQLHTIRRMETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRPQDAVITA 116 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR HG G+D + AELTGRQGG +KGKGGSMHM+S KN FYGG+GIVGAQV LG Sbjct: 117 YRAHGWTYLMGIDVFGVFAELTGRQGGNAKGKGGSMHMYS-KN-FYGGNGIVGAQVPLGV 174 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 GIAFA KY + +C+ +GDGAANQGQV+E +NIA LW++ I+V ENN Y MGTSV R Sbjct: 175 GIAFAQKYLNNGGVCLTLYGDGAANQGQVFEVYNIAKLWDVPCIFVCENNGYGMGTSVER 234 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 A+A T + RG +PG+ VDGMD+ AV+ A+ +C + KGPII+E +TYRY GHS Sbjct: 235 AAASTEYYTRGDY--VPGIWVDGMDVLAVREATKFAIDHCTSGKGPIIMETVTYRYSGHS 292 Query: 289 MSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 MSDP +YRTREE+ E+R DP+ ++R+L+ A+ ++K IE +RK ++++++ A Sbjct: 293 MSDPGTSYRTREEVQEVRQTRDPLTSFKERILNFNLATADEIKAIEGEIRKSVDDAMKAA 352 Query: 348 QSDKEPDPAELYSDI 362 ++DKE EL +DI Sbjct: 353 KNDKEIPLNELTADI 367 >gi|255037635|ref|YP_003088256.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Dyadobacter fermentans DSM 18053] gi|254950391|gb|ACT95091.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Dyadobacter fermentans DSM 18053] Length = 343 Score = 318 bits (815), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 161/316 (50%), Positives = 214/316 (67%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KEQ + + MLL RRFEEK+GQLYG + GFCHL IGQEA G +L +GD+ ITA Sbjct: 20 KEQYMFWFENMLLQRRFEEKSGQLYGQQKIRGFCHLYIGQEACSSGAVSALKKGDKYITA 79 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HG LA G + IMAEL G++ G +KGKGGSMH+F + GF GGHGIVG Q+ LG Sbjct: 80 YRDHGIPLALGTSPNAIMAELYGKKTGTTKGKGGSMHIFDKEVGFIGGHGIVGGQIPLGA 139 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 GIAFA KY ++D +C+ FGDGA QG +E+ N+A W L VI+V+ENN YAMGTSV+R Sbjct: 140 GIAFAEKYNKTDNLCICYFGDGAIRQGSFHETLNMAMSWKLPVIFVVENNGYAMGTSVAR 199 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 S T G +++IP VDGM + A+ + +A R +GP +E TYRYRGHS Sbjct: 200 TSNVTELYTLGEAYDIPSEPVDGMSVEAIHEAVSRAAERARKGEGPTFLEFRTYRYRGHS 259 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDP YR++EE+ E + + DPIEQ+R +L NK A+E +L I+ V++I+ SV+FA+ Sbjct: 260 MSDPQKYRSKEEVEEYK-HRDPIEQIRAVILENKLATEEELDNIDKKVKEIVAESVQFAE 318 Query: 349 SDKEPDPAELYSDILI 364 + PDP E Y+D+ + Sbjct: 319 ESEWPDPKEAYTDVYV 334 >gi|328866957|gb|EGG15340.1| pyruvate dehydrogenase E1 alpha subunit [Dictyostelium fasciculatum] Length = 439 Score = 318 bits (815), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 159/316 (50%), Positives = 218/316 (68%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 NK++ ++ + M +RR E A QLY ++ GFCHL GQEAV GM+ ++T+ D +IT Sbjct: 52 NKDELMTFFTDMTKMRRIETVADQLYKKKLIRGFCHLYNGQEAVCTGMEAAITKEDHVIT 111 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR+H ++A G +I+AEL + G SKGKGGSMHMF T+N FYGG+GIVGAQ LG Sbjct: 112 AYRDHTFMMARGATPKEILAELLMKSTGCSKGKGGSMHMF-TRN-FYGGNGIVGAQCPLG 169 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIAF KY + +C+ +GDGAANQGQ++E+FN+A LW+L I++ ENN++ MGT Sbjct: 170 AGIAFTQKYNNTGNVCLTYYGDGAANQGQLFEAFNMAKLWDLPCIFICENNKFGMGTPQK 229 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RA+A +F R + IPG++VDGM++ AVK A +CRA KGP+++EM TYRY GH Sbjct: 230 RAAAGDDFYTR--AHYIPGIKVDGMNVLAVKTAGKWAADWCRAGKGPLVMEMDTYRYVGH 287 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YRTREE+N +R DPIE VRK +L NK A+E +L IE R ++ + EF Sbjct: 288 SMSDPGTSYRTREEVNNVRQIRDPIEYVRKLILDNKCATEDELTAIEDAARVEMDEAAEF 347 Query: 347 AQSDKEPDPAELYSDI 362 A + P+P ELY+++ Sbjct: 348 AIASPFPEPGELYTNV 363 >gi|60302740|ref|NP_001012562.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial [Gallus gallus] gi|60098555|emb|CAH65108.1| hypothetical protein RCJMB04_3l20 [Gallus gallus] Length = 399 Score = 318 bits (815), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 171/313 (54%), Positives = 225/313 (71%), Gaps = 5/313 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L Y+ M IRR E K+ QLY ++ GFCHL GQEA VG+++++ D +I Sbjct: 63 LTREEGLHYYKTMQTIRRMELKSDQLYKQKIIRGFCHLYDGQEACCVGLEVAIKPTDHVI 122 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG A GV +I+AELTGR+GG +KGKGGSMHM+ TKN FYGG+GIVGAQV L Sbjct: 123 TAYRAHGFTYARGVPVREILAELTGRKGGCAKGKGGSMHMY-TKN-FYGGNGIVGAQVPL 180 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIA A KY +++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV Sbjct: 181 GAGIALACKYFGKNEVCLTLYGDGAANQGQIFETYNMAALWKLPCIFICENNRYGMGTSV 240 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T++ KRG F IPG++VDGMD+ V+ A YCRA KGPI++E+ TYRY G Sbjct: 241 ERAAASTDYYKRG-DF-IPGLRVDGMDVLCVREAAKFAAEYCRAGKGPIVMELQTYRYHG 298 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREEI E+RS DPI ++ R+++N AS +LKEI++ VRK I + + Sbjct: 299 HSMSDPGISYRTREEIQEVRSKSDPITLLKDRMINNNLASVEELKEIDVAVRKEIEEAAQ 358 Query: 346 FAQSDKEPDPAEL 358 FA +D EP EL Sbjct: 359 FATTDPEPPLEEL 371 >gi|215261376|pdb|3EXH|C Chain C, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261380|pdb|3EXH|G Chain G, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex Length = 382 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 176/335 (52%), Positives = 233/335 (69%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 26 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 85 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 86 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 145 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+A Sbjct: 146 HMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMA 203 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGT+V RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 204 ALWKLPCIFICENNRYGMGTAVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 261 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GH MSDP YRTREEI E+RS DPI ++ R++++ Sbjct: 262 AAYCRSGKGPILMELQTYRYHGHXMSDPGVAYRTREEIQEVRSKSDPIMLLKDRMVNSNL 321 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 322 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 356 >gi|326913568|ref|XP_003203108.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like [Meleagris gallopavo] Length = 416 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 171/313 (54%), Positives = 224/313 (71%), Gaps = 5/313 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L Y+ M IRR E K+ QLY ++ GFCHL GQEA VG+++++ D +I Sbjct: 80 LTREEGLHYYKTMQTIRRMELKSDQLYKQKIIRGFCHLYDGQEACCVGLEVAIKPTDHVI 139 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG A GV +I+AELTGR+GG KGKGGSMHM+ TKN FYGG+GIVGAQV L Sbjct: 140 TAYRAHGFTYARGVPVREILAELTGRKGGCVKGKGGSMHMY-TKN-FYGGNGIVGAQVPL 197 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIA A KY +++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV Sbjct: 198 GAGIALACKYFGKNEVCLTLYGDGAANQGQIFETYNMAALWKLPCIFICENNRYGMGTSV 257 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T++ KRG F IPG++VDGMD+ V+ A YCRA KGPI++E+ TYRY G Sbjct: 258 ERAAASTDYYKRG-DF-IPGLRVDGMDVLCVREAAKFAAEYCRAGKGPIVMELQTYRYHG 315 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREEI E+RS DPI ++ R+++N AS +LKEI++ VRK I + + Sbjct: 316 HSMSDPGISYRTREEIQEVRSKSDPITLLKDRMINNNLASVEELKEIDVAVRKEIEEAAQ 375 Query: 346 FAQSDKEPDPAEL 358 FA +D EP EL Sbjct: 376 FATTDPEPPLEEL 388 >gi|268529702|ref|XP_002629977.1| Hypothetical protein CBG13339 [Caenorhabditis briggsae] Length = 397 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 163/317 (51%), Positives = 212/317 (66%), Gaps = 6/317 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 NKE L YR M +IRR AG LY + GFCHL GQEA VGMK ++TEGD +I Sbjct: 51 LNKEDALKYYRDMQVIRRMS-AAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMTEGDAVI 109 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG G ++++AELTGR G GKGGSMHM+ TKN FYGG+GIVGAQ L Sbjct: 110 TAYRCHGWTWLLGATVTEVLAELTGRIAGNVHGKGGSMHMY-TKN-FYGGNGIVGAQQPL 167 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+A A KYR +CV +GDGAANQGQ++E+ N+A LW+L V++V ENN + MGT+V Sbjct: 168 GAGVALAMKYREQKNVCVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMGTAV 227 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+SA T + RG +PG+ VDGMDI AV+ A YC + KGP+++EM TYRY G Sbjct: 228 ERSSASTEYYTRGDY--VPGIWVDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYHG 285 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTR+EI E+R DPI + R++ + A+E +LK I+ VRK ++ +++ Sbjct: 286 HSMSDPGTSYRTRDEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEALK 345 Query: 346 FAQSDKEPDPAELYSDI 362 A SD P L++DI Sbjct: 346 IATSDGVLPPEALFTDI 362 >gi|148227748|ref|NP_001086638.1| pyruvate dehydrogenase (lipoamide) alpha 1 [Xenopus laevis] gi|50417951|gb|AAH77220.1| Pdha1-A-prov protein [Xenopus laevis] Length = 400 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 175/339 (51%), Positives = 233/339 (68%), Gaps = 7/339 (2%) Query: 27 ATSSVDCVDIPFLEGFEVSE--FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT V D+ LE ++ +EQ L YR M IRR E K+ QLY ++ GFCHL Sbjct: 44 ATFDVKKCDVHRLEEGPPTQAVLTREQGLQYYRTMQTIRRMELKSDQLYKQKIIRGFCHL 103 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 GQEA VG++ + D +ITAYR HG+ GV +I+AELTGR+GG +KGKGGSM Sbjct: 104 YDGQEACCVGLESGINPTDHLITAYRAHGYTYTRGVSVKEILAELTGRKGGCAKGKGGSM 163 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG G+A A K+ D+ICV +GDGAANQGQ++E++N+A Sbjct: 164 HMYA-KN-FYGGNGIVGAQVPLGAGVALACKFFGKDEICVSLYGDGAANQGQIFETYNMA 221 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG IPG++VDGMD+ V+ A Sbjct: 222 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDY--IPGLRVDGMDVLCVREATKFA 279 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 +CR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R+L+N Sbjct: 280 ADHCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPITLLKDRMLNNNL 339 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +S +LKEI++ VRK I + +FA +D EP E+ + I Sbjct: 340 SSVEELKEIDVEVRKEIEEAAQFATTDPEPPLEEIANHI 378 >gi|297840565|ref|XP_002888164.1| AT-E1 alpha [Arabidopsis lyrata subsp. lyrata] gi|297334005|gb|EFH64423.1| AT-E1 alpha [Arabidopsis lyrata subsp. lyrata] Length = 389 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 156/323 (48%), Positives = 222/323 (68%), Gaps = 10/323 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E + ++ L +R M L+RR E A LY ++ GFCHL GQEAV +GM+ ++T+ D + Sbjct: 53 ESSSQELLDFFRTMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKKDAI 112 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H L G +I +EL GRQ G SKGKGGSMH + ++ FYGGHGIVGAQV Sbjct: 113 ITAYRDHCIFLGRGGSLYEIFSELMGRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVP 172 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ Sbjct: 173 LGCGIAFAQKYNKEEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTA 232 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTY 282 RAS +++ KRG +PG++VDGMD AVK +A + + H KGPII+EM TY Sbjct: 233 EWRASKSSSYYKRGD--YVPGLKVDGMDAFAVK----QACKFAKQHALEKGPIILEMDTY 286 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI+ +R DPIE+++K +L + A+E +LK++E +RK ++ Sbjct: 287 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVD 346 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 +++ A+ P+P+EL++++ + Sbjct: 347 DAIAKAKDCPMPEPSELFTNVYV 369 >gi|291084744|ref|NP_001166926.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 3 precursor [Homo sapiens] gi|332224048|ref|XP_003261179.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 5 [Nomascus leucogenys] gi|221041292|dbj|BAH12323.1| unnamed protein product [Homo sapiens] Length = 397 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 178/342 (52%), Positives = 235/342 (68%), Gaps = 14/342 (4%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQ-------EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 C GQ EA VG++ + D +ITAYR HG G+ +I+AELTGR+GG + Sbjct: 94 CDGQFLLPLTQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCA 153 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ+ Sbjct: 154 KGKGGSMHMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQI 211 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 +E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V Sbjct: 212 FEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCV 269 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRK 316 + A AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ Sbjct: 270 REATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKD 329 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 R++++ AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 RMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 371 >gi|330790328|ref|XP_003283249.1| pyruvate dehydrogenase E1 alpha subunit [Dictyostelium purpureum] gi|325086796|gb|EGC40180.1| pyruvate dehydrogenase E1 alpha subunit [Dictyostelium purpureum] Length = 377 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 161/318 (50%), Positives = 220/318 (69%), Gaps = 5/318 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 NKE+ ++ + M +R+ E A LY ++ GFCHL GQEAV G++ S+T+ D +IT Sbjct: 48 NKEELMNYFTEMTRMRKLETVADGLYKKKLIRGFCHLYNGQEAVCAGLEYSVTKEDHIIT 107 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR+H ++L+ G +I AEL ++ G SKGKGGSMHMF T+N FYGG+GIVGAQ +G Sbjct: 108 AYRDHTYMLSRGATPEEIFAELLMKETGCSKGKGGSMHMF-TRN-FYGGNGIVGAQCPVG 165 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TGIAFA KY ++ +C+ +GDGAANQGQ++E+FN+A LW L VI+V ENN Y MGTS Sbjct: 166 TGIAFAQKYNKTGNVCLTLYGDGAANQGQLFEAFNMAELWKLPVIFVCENNHYGMGTSQK 225 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RA+A +F R + IPG++VDGMDI AV+ A + RA KGP+++EM TYRY GH Sbjct: 226 RAAAGHDFYTR--AHYIPGLKVDGMDIFAVREAGKYAADWARAGKGPMVLEMDTYRYVGH 283 Query: 288 SMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP YRTREEIN +R N DPIE +R +L NK+A+E +L IE V++ ++ + + Sbjct: 284 SMSDPGITYRTREEINSVRQNRDPIENLRNIILANKFATEDELTTIEDTVKQEMDVAADK 343 Query: 347 AQSDKEPDPAELYSDILI 364 A + P ELY+++ I Sbjct: 344 AIAAPFPQAKELYTNVYI 361 >gi|62510808|sp|Q8HXW9|ODPA_MACFA RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor gi|23574766|dbj|BAC20601.1| pyruvate dehydrogenase E1alpha [Macaca fascicularis] Length = 390 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 175/335 (52%), Positives = 233/335 (69%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGS Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGST 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FY G+GIVGAQV LG GIA A KY D++C+ +GDGAA+QGQ++E++N+A Sbjct: 154 HMYA-KN-FYRGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAADQGQIFEAYNMA 211 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 212 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 269 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 270 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 329 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 364 >gi|307189557|gb|EFN73927.1| Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [Camponotus floridanus] Length = 396 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 156/316 (49%), Positives = 218/316 (68%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++ + ++ + IRR E AG LY ++ GFCHL GQEA VGMK ++ D +IT Sbjct: 56 TRDDAIELFKKLHTIRRIETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRPQDAVIT 115 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG G++ + AELTGRQGG +KGKGGSMHM++ KN FYGG+GIVGAQV LG Sbjct: 116 AYRAHGWTYLMGIEPFGVFAELTGRQGGNAKGKGGSMHMYA-KN-FYGGNGIVGAQVPLG 173 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIAFA KY + +C+ +GDGAANQGQV+E +N+A LW++ I+V ENN Y MGTSV Sbjct: 174 VGIAFAQKYINNGGVCLALYGDGAANQGQVFEVYNMAKLWDVPCIFVCENNGYGMGTSVE 233 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RA+A T++ RG +PG+ +DGMD+ AV+ A+ +C + KGPII+E +TYRY GH Sbjct: 234 RAAASTDYYTRGDY--VPGIWIDGMDVLAVREATKFAIEHCTSGKGPIIMETMTYRYSGH 291 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YRTREE+ E+R DP+ ++R+L+ + ++K IE +RK ++++V+ Sbjct: 292 SMSDPGTSYRTREEVQEVRQTRDPLTSFKERILNANLVTADEIKTIEGEIRKSVDDAVKA 351 Query: 347 AQSDKEPDPAELYSDI 362 A++DKE +EL +DI Sbjct: 352 AKNDKEIPLSELTADI 367 >gi|448580|prf||1917268A pyruvate dehydrogenase:SUBUNIT=alpha Length = 361 Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 168/313 (53%), Positives = 223/313 (71%), Gaps = 5/313 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E L YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +I Sbjct: 27 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 86 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG G+ +I+AELTGR+GG +KGKGGSMHM++ KN FYGG+GIVGAQV L Sbjct: 87 TAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYA-KN-FYGGNGIVGAQVPL 144 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIA A KY ++C+ +GDGAANQGQ++E++N+AALW L +++ ENN+Y M TSV Sbjct: 145 GAGIALACKYNGLKEVCLTLYGDGAANQGQIFEAYNMAALWKLPCVFICENNRYGMCTSV 204 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T++ KRG F IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY G Sbjct: 205 ERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHG 262 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ + Sbjct: 263 HSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQ 322 Query: 346 FAQSDKEPDPAEL 358 FA +D EP EL Sbjct: 323 FATADPEPPLEEL 335 >gi|225718060|gb|ACO14876.1| Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor [Caligus clemensi] Length = 390 Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 163/317 (51%), Positives = 208/317 (65%), Gaps = 5/317 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ LS Y M +RR E A LY V GFCHL GQEA+ VGMK +L D +I Sbjct: 49 LTREEGLSYYESMFTVRRLENAASNLYKEKSVRGFCHLSSGQEAICVGMKAALRPQDAII 108 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR HG GV ++AELTG++ G+ +GKGGSMHM++ KN FYGG+GIVGAQV L Sbjct: 109 TSYRAHGFAYMMGVSLLGVLAELTGKKSGVVRGKGGSMHMYA-KN-FYGGNGIVGAQVPL 166 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIAFA KY + +GDGAA QGQVYE++N+A LW+L VI+V ENN Y MGT+ Sbjct: 167 GAGIAFAQKYNGDGGVTYSLYGDGAAQQGQVYEAYNMAKLWDLPVIFVCENNHYGMGTAQ 226 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T F RG IPG VDGMD+ AV+ AV YC + KGP++ E+ TYRY G Sbjct: 227 DRAAASTEFYTRGDY--IPGTLVDGMDVLAVREACKFAVDYCGSGKGPLVFEIATYRYHG 284 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREE+ E+R DPI +R +++ + +LK IE VRK I+ V+ Sbjct: 285 HSMSDPGTSYRTREEVQEIRQTMDPITGLRDKIIDCGLIAPEELKAIEQKVRKEIDAVVK 344 Query: 346 FAQSDKEPDPAELYSDI 362 A++D E DP ELY D+ Sbjct: 345 RAKTDTEIDPVELYYDV 361 >gi|115901559|ref|XP_001175746.1| PREDICTED: similar to Probable pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor (PDHE1-A) [Strongylocentrotus purpuratus] gi|115963800|ref|XP_001186546.1| PREDICTED: similar to Probable pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor (PDHE1-A) [Strongylocentrotus purpuratus] Length = 386 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 166/347 (47%), Positives = 222/347 (63%), Gaps = 11/347 (3%) Query: 23 AKRAATSSVDCVDIPF-LEGFE-----VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 A R + V PF L E S K++ L Y M IRR E A LY Sbjct: 24 ASRQVNTDVQLTTNPFKLHKLEEGPKKTSMLTKDEALDYYHKMQTIRRMETAAATLYKSK 83 Query: 77 MVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGI 136 V GFCHL GQEA VG+ LT D +ITAYR HG GV ++AELTGR+ G Sbjct: 84 EVRGFCHLYSGQEACAVGISSVLTPDDAVITAYRAHGWAYLRGVTLHGVLAELTGRRTGC 143 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 +KGKGGSMHM+ KN FYGG+GIVGAQV LG GIA A KY +C+ +GDGAANQGQ Sbjct: 144 AKGKGGSMHMYC-KN-FYGGNGIVGAQVPLGAGIALALKYTDKKNVCISLYGDGAANQGQ 201 Query: 197 VYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA 256 V+E++NIA LW+L I+V ENN+Y MGT+V R++A T++ RG IPG+ VDGMD+ A Sbjct: 202 VFEAYNIAKLWDLPCIFVCENNKYGMGTAVERSAASTDYYTRG--DYIPGIWVDGMDVVA 259 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVR 315 V+ A YC + KGP+++E+ TYRY GHSMSDP +YR+REE+ E+R + DPI +++ Sbjct: 260 VREATRYAKDYCTSGKGPLVMEVETYRYHGHSMSDPGTSYRSREEVQEIRQSQDPITKLK 319 Query: 316 KRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +L N+ ASE +LK I+ +VR ++ ++ A++D E +E +++I Sbjct: 320 DTILSNELASEAELKAIDASVRSAVDEAMTKAKADPELPVSETFTNI 366 >gi|15218940|ref|NP_176198.1| AT-E1 ALPHA; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring) [Arabidopsis thaliana] gi|27735220|sp|P52901|ODPA1_ARATH RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|5080822|gb|AAD39331.1|AC007258_20 pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|21593256|gb|AAM65205.1| pyruvate dehydrogenase e1 alpha subunit, putative [Arabidopsis thaliana] gi|24030439|gb|AAN41374.1| putative pyruvate dehydrogenase e1 alpha subunit [Arabidopsis thaliana] gi|332195517|gb|AEE33638.1| pyruvate dehydrogenase complex E1 alpha subunit [Arabidopsis thaliana] Length = 389 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 154/323 (47%), Positives = 221/323 (68%), Gaps = 10/323 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E + ++ L +R M L+RR E A LY ++ GFCHL GQEAV +GM+ ++T+ D + Sbjct: 53 ESSSQELLDFFRTMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKKDAI 112 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H L G ++ +EL GRQ G SKGKGGSMH + ++ FYGGHGIVGAQV Sbjct: 113 ITAYRDHCIFLGRGGSLHEVFSELMGRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVP 172 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ Sbjct: 173 LGCGIAFAQKYNKEEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTA 232 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTY 282 RA+ ++ KRG +PG++VDGMD AVK +A + + H KGPII+EM TY Sbjct: 233 EWRAAKSPSYYKRGD--YVPGLKVDGMDAFAVK----QACKFAKQHALEKGPIILEMDTY 286 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI+ +R DPIE+++K +L + A+E +LK++E +RK ++ Sbjct: 287 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVD 346 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 +++ A+ P+P+EL++++ + Sbjct: 347 DAIAKAKDCPMPEPSELFTNVYV 369 >gi|157107633|ref|XP_001649868.1| pyruvate dehydrogenase [Aedes aegypti] gi|108868670|gb|EAT32895.1| pyruvate dehydrogenase [Aedes aegypti] Length = 371 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 158/316 (50%), Positives = 213/316 (67%), Gaps = 6/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 K+ L Y M IRR E AG LY ++ GFCHL GQEA VGM+ ++ D IT Sbjct: 31 TKDDALKYYSQMYAIRRMETAAGNLYKEKIIRGFCHLYSGQEACAVGMRAAMRPEDSCIT 90 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG GV ++AELTGRQ G ++GKGGSMHM+S + FYGG+GIVGAQV LG Sbjct: 91 AYRCHGWTYLMGVSMQGVLAELTGRQSGCARGKGGSMHMYS--HNFYGGNGIVGAQVPLG 148 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G AFA KY+ + +C+ +GDGAANQGQ++E +N+A LWN VI+V ENN Y MGTS Sbjct: 149 VG-AFAAKYKGTKGVCIAAYGDGAANQGQLFEVYNMAKLWNTPVIFVCENNGYGMGTSAE 207 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RASA N+ RG + +PG+ VDGMD+ AV+ A+ +C + KGPI++E TYRY GH Sbjct: 208 RASANVNYYTRGDT--VPGIWVDGMDVLAVREATKFAIDHCNSGKGPILLETATYRYSGH 265 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YR+R+EI E+R DPI +R+++L N+ A+ +LKEIE +R ++++ + Sbjct: 266 SMSDPGTSYRSRDEIAEVRQTRDPITSLREKILTNELATTEELKEIESKIRGEVDSATKV 325 Query: 347 AQSDKEPDPAELYSDI 362 A++D+E EL +DI Sbjct: 326 AKADREIPVDELCTDI 341 >gi|211906500|gb|ACJ11743.1| pyruvate dehydrogenase alpha subunit [Gossypium hirsutum] Length = 394 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 156/321 (48%), Positives = 219/321 (68%), Gaps = 10/321 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E N ++ L+ +R M L+RR E A LY ++ GFCHL GQEAV VGM+ ++T+ D + Sbjct: 58 ETNPKELLTFFRDMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCI 117 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H ++ G ++ AEL GRQ G SKGKGGSMH + + FYGGHGIVGAQV Sbjct: 118 ITAYRDHCTFVSRGGTLLEVFAELMGRQAGCSKGKGGSMHFYKKDSNFYGGHGIVGAQVP 177 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ Sbjct: 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTA 237 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTY 282 RA+ + KRG +PG++VDGMD AVK +A + + H GPII+EM TY Sbjct: 238 EWRAAKSPAYYKRGD--YVPGLKVDGMDALAVK----QACKFAKEHALKNGPIILEMDTY 291 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI+ +R DPIE++RK +L + A+E +LK++E VRK ++ Sbjct: 292 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILSHDLATEKELKDVEKEVRKEVD 351 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 +++ A+ P+P+EL++++ Sbjct: 352 DAIAQAKESPMPEPSELFTNV 372 >gi|115467364|ref|NP_001057281.1| Os06g0246500 [Oryza sativa Japonica Group] gi|52076750|dbj|BAD45661.1| putative pyruvate dehydrogenase E1 alpha subunit [Oryza sativa Japonica Group] gi|113595321|dbj|BAF19195.1| Os06g0246500 [Oryza sativa Japonica Group] gi|125554738|gb|EAZ00344.1| hypothetical protein OsI_22361 [Oryza sativa Indica Group] gi|215740440|dbj|BAG97096.1| unnamed protein product [Oryza sativa Japonica Group] Length = 398 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 156/313 (49%), Positives = 212/313 (67%), Gaps = 10/313 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M +RR E A LY ++ GFCHL GQEAV VGM+ + T D +ITAYR+H Sbjct: 72 FRDMSAMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAATTRADAIITAYRDHCAY 131 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D + + AEL GR+GG S+GKGGSMH++ FYGGHGIVGAQV LG G+AFA + Sbjct: 132 LARGGDLAALFAELMGRRGGCSRGKGGSMHLYKKDANFYGGHGIVGAQVPLGCGLAFAQR 191 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 YR+ + +GDGAANQGQ++E+ N+AALW L V+ V ENN Y MGT+ RAS + Sbjct: 192 YRKEAAVTFDLYGDGAANQGQLFEALNMAALWKLPVVLVCENNHYGMGTAEWRASKSPAY 251 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP 292 KRG +PG++VDGMD+ AVK +A + + H GPII+EM TYRY GHSMSDP Sbjct: 252 YKRGD--YVPGLKVDGMDVLAVK----QACKFAKQHALENGPIILEMDTYRYHGHSMSDP 305 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YRTR+EI +R DPIE+VRK LL + +A+ +LK++E +RK ++ ++ A+ Sbjct: 306 GSTYRTRDEIAGIRQERDPIERVRKLLLAHDFATTQELKDMEKEIRKQVDTAIAKAKESP 365 Query: 352 EPDPAELYSDILI 364 PDP+EL++++ + Sbjct: 366 MPDPSELFTNVYV 378 >gi|710400|gb|AAA86507.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] Length = 389 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 154/323 (47%), Positives = 221/323 (68%), Gaps = 10/323 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E + ++ L +R M L+RR E A LY ++ GFCHL GQEAV +GM+ ++T+ D + Sbjct: 53 ESSSQELLDFFRTMALMRRMEIAADSLYKANVIRGFCHLYDGQEAVAIGMEAAITKKDAI 112 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H L G ++ +EL GRQ G SKGKGGSMH + ++ FYGGHGIVGAQV Sbjct: 113 ITAYRDHCIFLGRGGSLHEVFSELMGRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVP 172 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ Sbjct: 173 LGCGIAFAQKYNKEEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTA 232 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTY 282 RA+ ++ KRG +PG++VDGMD AVK +A + + H KGPII+EM TY Sbjct: 233 EWRAAKSPSYYKRGD--YVPGLKVDGMDAFAVK----QACKFAKQHALEKGPIILEMDTY 286 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI+ +R DPIE+++K +L + A+E +LK++E +RK ++ Sbjct: 287 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVD 346 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 +++ A+ P+P+EL++++ + Sbjct: 347 DAIAKAKDCPMPEPSELFTNVYV 369 >gi|129051|sp|P26268|ODPT_ASCSU RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha type II, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|159677|gb|AAA29377.1| pyruvate dehydrogenase type II alpha subunit [Ascaris suum] Length = 391 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 161/316 (50%), Positives = 203/316 (64%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE L Y M IRR E AG LY V GFCHL GQEA VGMK ++ GD IT Sbjct: 48 TKEDALRYYTQMQTIRRMETAAGNLYKEKKVRGFCHLYSGQEACAVGMKAAMEPGDAAIT 107 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG G +K++ ELTGR G GKGGSMHM+ FYGG+GIVGAQ LG Sbjct: 108 AYRCHGWTYLSGSPVAKVLCELTGRITGNVYGKGGSMHMYG--ENFYGGNGIVGAQQPLG 165 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TGIAFA KY++ +C+ FGDGA NQGQ+YES N+A LW L V+YV ENN Y MGTS + Sbjct: 166 TGIAFAMKYKKQKNVCITLFGDGATNQGQLYESMNMAKLWELPVLYVCENNGYGMGTSAA 225 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R+SA T++ RG +PG VDGMD+ AV+ + +C A KGP++IEM TYRY GH Sbjct: 226 RSSASTDYYTRGDY--VPGFWVDGMDVLAVRQAIRWGKEWCNAGKGPLMIEMATYRYGGH 283 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YRTREEI E+R DPI + +++ +E +LKE++ +RK ++ +V+ Sbjct: 284 SMSDPGTSYRTREEIQEVRKTRDPITGFKDKIVTAGLVTEDELKEVDKEIRKEVDAAVKQ 343 Query: 347 AQSDKEPDPAELYSDI 362 A +DKE L +DI Sbjct: 344 AHTDKEAPVEMLLTDI 359 >gi|129048|sp|P26267|ODPA_ASCSU RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha type I, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|159675|gb|AAA29376.1| pyruvate dehydrogenase type I alpha subunit [Ascaris suum] Length = 396 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 160/312 (51%), Positives = 205/312 (65%), Gaps = 6/312 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE + Y ML IRR E AG LY V GFCHL GQEA VG K ++ GD +T Sbjct: 53 TKEDAVHYYTQMLTIRRMESAAGNLYKEKKVRGFCHLYSGQEACAVGTKAAMDAGDAAVT 112 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG G +K++ ELTGR G GKGGSMHM+ FYGG+GIVGAQ LG Sbjct: 113 AYRCHGWTYLSGSSVAKVLCELTGRITGNVYGKGGSMHMYG--ENFYGGNGIVGAQQPLG 170 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TGIAFA KYR+ +C+ FGDGA NQGQ++ES N+A LW+L V+YV ENN Y MGT+ + Sbjct: 171 TGIAFAMKYRKEKNVCITMFGDGATNQGQLFESMNMAKLWDLPVLYVCENNGYGMGTAAA 230 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R+SA T++ RG +PG+ VDGMD+ AV+ + A +C A KGP++IEM TYRY GH Sbjct: 231 RSSASTDYYTRGDY--VPGIWVDGMDVLAVRQAVRWAKEWCNAGKGPLMIEMATYRYSGH 288 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YRTREE+ E+R DPI + +++ +E ++KEI+ VRK I+ +V+ Sbjct: 289 SMSDPGTSYRTREEVQEVRKTRDPITGFKDKIVTAGLVTEDEIKEIDKQVRKEIDAAVKQ 348 Query: 347 AQSDKEPDPAEL 358 A +DKE P EL Sbjct: 349 AHTDKE-SPVEL 359 >gi|28465345|dbj|BAC57469.1| pyruvate dehydrogenase E1 alpha subunit [Beta vulgaris] Length = 395 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 158/313 (50%), Positives = 212/313 (67%), Gaps = 4/313 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 ++ +R M L+RR E + LY ++ GFCHL GQEAV VGM+ ++T+ D +ITAYR+H Sbjct: 66 MTYFRDMALMRRMEIASDSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDNIITAYRDH 125 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 LA G AEL GRQ G S+GKGGSMH + +GFYGGHGIVGAQV LG G+AF Sbjct: 126 CIYLARGGSLLSAFAELVGRQDGCSRGKGGSMHFYKKDSGFYGGHGIVGAQVPLGVGLAF 185 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A KY + D + +GDGAANQGQ++E+ N+AALW+L I V ENN Y MGT+ RA+ Sbjct: 186 AQKYNKEDCVSFALYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKS 245 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 ++ KRG +PG++VDGMD+ AVK A Y + GPII+EM TYRY GHSMSDP Sbjct: 246 PSYYKRGD--YVPGLKVDGMDVLAVKQACKSAKEYVLKN-GPIILEMDTYRYHGHSMSDP 302 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YRTR+EI+ +R DPIE+VRK LL + A E +LK+IE +RK ++ ++ A+ Sbjct: 303 GSTYRTRDEISGIRQERDPIERVRKLLLAHDIAGEKELKDIEKEIRKEVDEAIAKAKESP 362 Query: 352 EPDPAELYSDILI 364 PD +EL+++I + Sbjct: 363 MPDTSELFTNIYV 375 >gi|316969817|gb|EFV53857.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Trichinella spiralis] Length = 411 Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 153/316 (48%), Positives = 204/316 (64%), Gaps = 3/316 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +++ + R MLL+RR E A +Y + GFCHL GQEAV VGMK ++ E D +IT Sbjct: 67 TRDEAMKYLREMLLVRRMETTASNMYKEKQIRGFCHLYSGQEAVAVGMKAAMNEDDSIIT 126 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG G+ ++ AEL GR G GKGGSMHM++ K+ FYGG IVGAQ+ LG Sbjct: 127 AYRCHGWSFLSGITLKQVFAELAGRVTGAVHGKGGSMHMYNVKSHFYGGCAIVGAQIPLG 186 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TGI+FA KYR K+ +GDGA+NQGQ+YES N+A LW L ++V ENN Y MGTSV Sbjct: 187 TGISFAYKYRDEKKVSFCLYGDGASNQGQLYESLNMAKLWRLPCVFVCENNGYGMGTSVE 246 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R+SA T + RG +PG+ V+ MD+ AV+ YCR GP+++EM TYRY GH Sbjct: 247 RSSASTEYYTRGD--YVPGLWVNAMDVLAVRQATKWVAEYCREGNGPVVLEMATYRYFGH 304 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YRTREEI ++R DPI R+++L A+E +LK++E VRK + ++E Sbjct: 305 SMSDPGTSYRTREEIQKVRKLRDPITSFREKMLSANLATEEELKDLEKQVRKEVEKALEE 364 Query: 347 AQSDKEPDPAELYSDI 362 A D +P LY+D+ Sbjct: 365 ALKDVDPPLELLYTDV 380 >gi|324518008|gb|ADY46979.1| Pyruvate dehydrogenase E1 component subunit alpha type II [Ascaris suum] Length = 396 Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 161/316 (50%), Positives = 203/316 (64%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE L Y M IRR E AG LY V GFCHL GQEA VGMK ++ GD IT Sbjct: 53 TKEDALRYYTQMQTIRRMETAAGNLYKEKKVRGFCHLYSGQEACAVGMKAAMEPGDAAIT 112 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG G +K++ ELTGR G GKGGSMHM+ FYGG+GIVGAQ LG Sbjct: 113 AYRCHGWTYLSGSPVAKVLCELTGRITGNVYGKGGSMHMYG--ENFYGGNGIVGAQQPLG 170 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TGIAFA KY++ +C+ FGDGA NQGQ+YES N+A LW L V+YV ENN Y MGTS + Sbjct: 171 TGIAFAMKYKKQKNVCITLFGDGATNQGQLYESMNMAKLWELPVLYVCENNGYGMGTSAA 230 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R+SA T++ RG +PG VDGMD+ AV+ + +C A KGP++IEM TYRY GH Sbjct: 231 RSSASTDYYTRGDY--VPGFWVDGMDVLAVRQAIRWGKEWCNAGKGPLMIEMATYRYGGH 288 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YRTREEI E+R DPI + +++ +E +LKE++ +RK ++ +V+ Sbjct: 289 SMSDPGTSYRTREEIQEVRKTRDPITGFKDKIVTAGLVTEDELKEVDKEIRKEVDAAVKQ 348 Query: 347 AQSDKEPDPAELYSDI 362 A +DKE L +DI Sbjct: 349 AHTDKEAPVEMLLTDI 364 >gi|1709449|sp|P52902|ODPA_PEA RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|1263302|gb|AAA97411.1| pyruvate dehydrogenase E1 alpha subunit [Pisum sativum] Length = 397 Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 164/359 (45%), Positives = 226/359 (62%), Gaps = 16/359 (4%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFL-----EGFEVSEFNKEQELSAYRLMLLIRRFEEKA 69 LN +S+ AT +++ +PF + + LS +R M L+RR E A Sbjct: 26 FTLNRPISSDTTATLTIE-TSLPFTAHNCDPPSRSVTTSPSELLSFFRTMALMRRMEIAA 84 Query: 70 GQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAEL 129 LY ++ GFCHL GQEAV VGM+ T+ D +ITAYR+H L G ++ AEL Sbjct: 85 DSLYKANLIRGFCHLYDGQEAVAVGMEAGTTKKDCIITAYRDHCTFLGRGGTLLRVYAEL 144 Query: 130 TGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGD 189 GR+ G SKGKGGSMH + +GFYGGHGIVGAQV LG G+AF KY + + + +GD Sbjct: 145 MGRRDGCSKGKGGSMHFYKKDSGFYGGHGIVGAQVPLGCGLAFGQKYLKDESVTFALYGD 204 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 GAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ R++ + KRG +PG++V Sbjct: 205 GAANQGQLFEALNISALWDLPAILVCENNHYGMGTATWRSAKSPAYFKRGD--YVPGLKV 262 Query: 250 DGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMR 305 DGMD AVK +A + + H GPII+EM TYRY GHSMSDP + YRTR+EI+ +R Sbjct: 263 DGMDALAVK----QACKFAKEHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVR 318 Query: 306 SNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 DPIE+VRK LL + A+E +LK+ E VRK ++ ++ A+ PDP++L+S++ + Sbjct: 319 QERDPIERVRKLLLSHDIATEKELKDTEKEVRKEVDEAIAKAKDSPMPDPSDLFSNVYV 377 >gi|226495171|ref|NP_001140222.1| hypothetical protein LOC100272256 [Zea mays] gi|194698556|gb|ACF83362.1| unknown [Zea mays] Length = 392 Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 159/316 (50%), Positives = 213/316 (67%), Gaps = 10/316 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 LS +R M L+RRFE A LY ++ GFCHL GQEAV VGM+ + T D +ITAYR+H Sbjct: 63 LSFFRDMSLMRRFEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAATRADAIITAYRDH 122 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 LA G D AEL GR+ G S+GKGGSMH + F+GGHGIVGAQV LG GIAF Sbjct: 123 CAYLARGGDPVAAFAELMGRRDGCSRGKGGSMHFYKRDANFFGGHGIVGAQVPLGCGIAF 182 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A +YR+ + +GDGAANQGQ++E+ N+AALW L VI V ENN Y MGT+ RAS Sbjct: 183 AQRYRKEGTVTFDLYGDGAANQGQLFEALNMAALWKLPVILVCENNHYGMGTAEWRASKS 242 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSM 289 + KRG +PG++VDGMD+ AVK +A + + H GPII+EM TYRY GHSM Sbjct: 243 PAYYKRGD--YVPGLKVDGMDVLAVK----QACKFAKEHALENGPIILEMDTYRYHGHSM 296 Query: 290 SDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 SDP + YRTR+EI +R DPIE+VRK +L +++A+ +LK++E +RK ++ ++ A+ Sbjct: 297 SDPGSTYRTRDEIAGIRQERDPIERVRKLMLVHEFATAQELKDMEKEIRKQVDAAIAKAK 356 Query: 349 SDKEPDPAELYSDILI 364 PDP+EL++++ + Sbjct: 357 ECPLPDPSELFTNVYV 372 >gi|222635308|gb|EEE65440.1| hypothetical protein OsJ_20802 [Oryza sativa Japonica Group] Length = 612 Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 156/313 (49%), Positives = 212/313 (67%), Gaps = 10/313 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M +RR E A LY ++ GFCHL GQEAV VGM+ + T D +ITAYR+H Sbjct: 146 FRDMSAMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAATTRADAIITAYRDHCAY 205 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D + + AEL GR+GG S+GKGGSMH++ FYGGHGIVGAQV LG G+AFA + Sbjct: 206 LARGGDLAALFAELMGRRGGCSRGKGGSMHLYKKDANFYGGHGIVGAQVPLGCGLAFAQR 265 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 YR+ + +GDGAANQGQ++E+ N+AALW L V+ V ENN Y MGT+ RAS + Sbjct: 266 YRKEAAVTFDLYGDGAANQGQLFEALNMAALWKLPVVLVCENNHYGMGTAEWRASKSPAY 325 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP 292 KRG +PG++VDGMD+ AVK +A + + H GPII+EM TYRY GHSMSDP Sbjct: 326 YKRGDY--VPGLKVDGMDVLAVK----QACKFAKQHALENGPIILEMDTYRYHGHSMSDP 379 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YRTR+EI +R DPIE+VRK LL + +A+ +LK++E +RK ++ ++ A+ Sbjct: 380 GSTYRTRDEIAGIRQERDPIERVRKLLLAHDFATTQELKDMEKEIRKQVDTAIAKAKESP 439 Query: 352 EPDPAELYSDILI 364 PDP+EL++++ + Sbjct: 440 MPDPSELFTNVYV 452 >gi|28465343|dbj|BAC57468.1| pyruvate dehydrogenase E1alpha subunit [Beta vulgaris] Length = 395 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 158/313 (50%), Positives = 212/313 (67%), Gaps = 4/313 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 ++ +R M L+RR E + LY ++ GFCHL GQEAV VGM+ ++T+ D +ITAYR+H Sbjct: 66 MTYFRDMALMRRMEIASDSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDNIITAYRDH 125 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 LA G AEL GRQ G S+GKGGSMH + +GFYGGHGIVGAQV LG G+AF Sbjct: 126 CIYLARGGSLLSAFAELMGRQDGCSRGKGGSMHFYKKDSGFYGGHGIVGAQVPLGVGLAF 185 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A KY + D + +GDGAANQGQ++E+ N+AALW+L I V ENN Y MGT+ RA+ Sbjct: 186 AQKYNKEDCVSFALYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKS 245 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 ++ KRG +PG++VDGMD+ AVK A Y + GPII+EM TYRY GHSMSDP Sbjct: 246 PSYYKRGD--YVPGLKVDGMDVLAVKQACKFAKEYVLKN-GPIILEMDTYRYHGHSMSDP 302 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YRTR+EI+ +R DPIE+VRK LL + A E +LK+IE +RK ++ ++ A+ Sbjct: 303 GSTYRTRDEISGIRQERDPIERVRKLLLAHDIAGEKELKDIEKEIRKEVDEAIAKAKESP 362 Query: 352 EPDPAELYSDILI 364 PD +EL+++I + Sbjct: 363 MPDTSELFTNIYV 375 >gi|13430788|gb|AAK26016.1|AF360306_1 putative pyruvate dehydrogenase e1 alpha subunit [Arabidopsis thaliana] Length = 389 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 153/323 (47%), Positives = 221/323 (68%), Gaps = 10/323 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E + ++ L +R M L+RR E A LY ++ GFCHL GQEAV +GM+ ++T+ D + Sbjct: 53 ESSSQELLDFFRTMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKKDAI 112 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H L G ++ +EL GRQ G SKGKGGSMH + ++ FYGGHGIVGAQV Sbjct: 113 ITAYRDHCIFLGRGGSLHEVFSELMGRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVP 172 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ Sbjct: 173 LGCGIAFAQKYNKEEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTA 232 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTY 282 RA+ ++ KRG +PG++VDGMD AVK +A + + H KGPII+EM TY Sbjct: 233 EWRAAKSPSYYKRGD--YVPGLKVDGMDAFAVK----QACKFAKQHALEKGPIILEMDTY 286 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI+ +R DPIE+++K +L + A+E +LK++E +RK ++ Sbjct: 287 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVD 346 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 +++ A+ P+P++L++++ + Sbjct: 347 DAIAKAKDCPMPEPSDLFTNVYV 369 >gi|195659213|gb|ACG49074.1| pyruvate dehydrogenase E1 component alpha subunit [Zea mays] Length = 392 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 158/316 (50%), Positives = 213/316 (67%), Gaps = 10/316 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 LS +R M L+RRFE A LY ++ GFCHL GQEAV VGM+ + T D +ITAYR+H Sbjct: 63 LSFFRDMSLMRRFEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAATRADAIITAYRDH 122 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 LA G D AEL GR+ G S+GKGGSMH + F+GGHGIVGAQV LG GIAF Sbjct: 123 CAYLARGGDPVAAFAELMGRRDGCSRGKGGSMHFYKRDANFFGGHGIVGAQVPLGCGIAF 182 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A +YR+ + +GDGAANQGQ++E+ N+AALW L +I V ENN Y MGT+ RAS Sbjct: 183 AQRYRKEGTVTFDLYGDGAANQGQLFEALNMAALWKLPIILVCENNHYGMGTAEWRASKS 242 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSM 289 + KRG +PG++VDGMD+ AVK +A + + H GPII+EM TYRY GHSM Sbjct: 243 PAYYKRGD--YVPGLKVDGMDVLAVK----QACKFAKEHALENGPIILEMDTYRYHGHSM 296 Query: 290 SDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 SDP + YRTR+EI +R DPIE+VRK +L +++A+ +LK++E +RK ++ ++ A+ Sbjct: 297 SDPGSTYRTRDEIAGIRQERDPIERVRKLMLVHEFATAQELKDMEKEIRKQVDAAIAKAK 356 Query: 349 SDKEPDPAELYSDILI 364 PDP+EL++++ + Sbjct: 357 ECPLPDPSELFTNVYV 372 >gi|168047407|ref|XP_001776162.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672537|gb|EDQ59073.1| predicted protein [Physcomitrella patens subsp. patens] Length = 394 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 167/357 (46%), Positives = 230/357 (64%), Gaps = 15/357 (4%) Query: 17 LNPSVSAKRAATSSVDC----VDIPFLEGFEVSEFNKEQELSA------YRLMLLIRRFE 66 ++P + RA ++S D + +PF +G +V + E SA +R M ++RR E Sbjct: 20 VSPGSTFARALSTSSDPLTLEIPVPF-KGHKVDPPSSTVETSAAELVDFFRTMFVMRRME 78 Query: 67 EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIM 126 A LY + GFCHL GQEAV VGM+ +L + D +ITAYR+H L G ++ Sbjct: 79 IAADSLYKSKFIRGFCHLYDGQEAVCVGMEAALNDKDCIITAYRDHCTHLGRGGTVLEVF 138 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 AEL GR+ G S GKGGSMHM++ K GFYGG+GIVGAQ LG G+AFA KY + D + + Sbjct: 139 AELMGRKDGCSLGKGGSMHMYNKKGGFYGGNGIVGAQTPLGAGLAFAQKYLKVDGVTLAM 198 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPG 246 +GDGAANQGQ++E+ NI+ALW+L VIYV ENN Y MGT+ R++ + KRG +PG Sbjct: 199 YGDGAANQGQLFEAMNISALWDLPVIYVCENNHYGMGTAEWRSAKSPEYYKRGD--YVPG 256 Query: 247 MQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMR 305 ++VDGMD AVK + A Y + GP+++EM TYRY GHSMSDP + YRTR+EI+ +R Sbjct: 257 LKVDGMDCLAVKQAVKFAKEYSLKN-GPMVLEMDTYRYHGHSMSDPGSTYRTRDEISGVR 315 Query: 306 SNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 DPIE++RK LL +++AS DLK IE +K + +++ A+ PD EL+S I Sbjct: 316 QERDPIERIRKLLLSHEFASVADLKAIEKEAKKEVEDALAKAKESPSPDAPELFSHI 372 >gi|66800847|ref|XP_629349.1| pyruvate dehydrogenase E1 alpha subunit [Dictyostelium discoideum AX4] gi|74850753|sp|Q54C70|ODPA_DICDI RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|60462647|gb|EAL60849.1| pyruvate dehydrogenase E1 alpha subunit [Dictyostelium discoideum AX4] Length = 377 Score = 312 bits (799), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 158/318 (49%), Positives = 214/318 (67%), Gaps = 5/318 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 NK++ +S + M RR E LY ++ GFCHL GQEAV G++ ++T+ D +IT Sbjct: 48 NKDELISFFTEMSRFRRLETVCDGLYKKKLIRGFCHLYTGQEAVCAGLESAITKDDHIIT 107 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR+H ++L+ G +I AEL ++ G SKGKGGSMHMF TKN FYGG+GIVGAQ LG Sbjct: 108 AYRDHTYMLSRGATPEEIFAELLMKETGCSKGKGGSMHMF-TKN-FYGGNGIVGAQCPLG 165 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIAFA KY ++ +C+ +GDGAANQGQ++E+FN+A+LW L VI++ ENN+Y MGTS Sbjct: 166 AGIAFAQKYNKTGNVCLAMYGDGAANQGQLFEAFNMASLWKLPVIFICENNKYGMGTSQK 225 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++A +F RG + G++VDGMD+ AVK A +CRA GPII+EM TYRY GH Sbjct: 226 RSTAGHDFYTRG--HYVAGLKVDGMDVFAVKEAGKYAAEWCRAGNGPIILEMDTYRYVGH 283 Query: 288 SMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP YRTREE+N +R DPIE +R+ +L NK A+E L IE VR + + E Sbjct: 284 SMSDPGITYRTREEVNHVRQTRDPIENIRQIILDNKIATEDQLAAIEETVRDEMEKASEK 343 Query: 347 AQSDKEPDPAELYSDILI 364 A + P EL++++ + Sbjct: 344 AIAAPLPQARELFTNVYL 361 >gi|195163425|ref|XP_002022550.1| GL13095 [Drosophila persimilis] gi|194104542|gb|EDW26585.1| GL13095 [Drosophila persimilis] Length = 540 Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 161/334 (48%), Positives = 219/334 (65%), Gaps = 7/334 (2%) Query: 30 SVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQE 89 + C D+ +V E +++ L Y ML +RR E A Y + GFCHL IGQE Sbjct: 64 TFKCYDLESGPPMDV-ELSRDDALKMYSQMLEVRRVETMASNYYKEKKIRGFCHLYIGQE 122 Query: 90 AVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFST 149 AV VGM + + D MITAYR H GV ++MAEL G + G S+GKGGSMHM+S Sbjct: 123 AVAVGMHARMRKQDSMITAYRCHAWTYLMGVSIYEMMAELLGVRTGCSRGKGGSMHMYSE 182 Query: 150 KNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL 209 + +YGG+GIVGAQV +G G+A A+++RR +C+VC+GDGAANQGQV+E++NIA LW L Sbjct: 183 R--YYGGNGIVGAQVPVGAGVALAHQFRRDGGVCIVCYGDGAANQGQVFEAYNIAKLWCL 240 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 I+V ENN YAMGT +RA+A T+F RG IPG+ VDG + AV++ A+ Y Sbjct: 241 PCIFVCENNDYAMGTKANRAAANTDFYMRGQY--IPGLWVDGNQVLAVRSATQFAIEYAL 298 Query: 270 AHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 AH GPI++EM TYRY GHSMSDP +YR+R+E+ +MR DPI R +++ A+E + Sbjct: 299 AH-GPIVLEMNTYRYVGHSMSDPGTSYRSRDEVKQMREKRDPITSFRGQIIALCLATEEE 357 Query: 329 LKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 LK+IE RK +++ + A DKE DP EL++D+ Sbjct: 358 LKKIETETRKRVDDDCKKAAKDKEVDPIELHADV 391 >gi|59042884|gb|AAW83831.1| E1 alpha subunit of pyruvate dehydrogenase [Petunia x hybrida] Length = 390 Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 166/377 (44%), Positives = 236/377 (62%), Gaps = 20/377 (5%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCV---DIPFLEGFEVS------EFNKEQ 51 M ++ TV L +VS R +++ +PF G + E N + Sbjct: 1 MALSTTRTTVSKFLKPLTTAVSTTRHLSTTNTLTIETSLPFT-GHNIDPPSRTVETNPNE 59 Query: 52 ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 L+ ++ M +RR E A LY ++ GFCHL GQEAV +GM+ ++T+ D +ITAYR+ Sbjct: 60 LLTFFKDMAEMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMESAITKKDCIITAYRD 119 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 H L+ G + +EL GR+ G SKGKGGSMH + +GFYGGHGIVGAQV LG G+A Sbjct: 120 HCIFLSRGGTLFECFSELMGRKDGCSKGKGGSMHFYKKDSGFYGGHGIVGAQVPLGIGLA 179 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 FA KY + D + +GDGAANQGQ++E+ N+AALW+L I V ENN Y MGT+ RA+ Sbjct: 180 FAQKYSKEDHVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAK 239 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHS 288 ++ KRG +PG++VDGMD AVK +A + + H GPII+EM TYRY GHS Sbjct: 240 SPSYYKRGD--YVPGLKVDGMDALAVK----QACKFAKEHALKNGPIILEMDTYRYHGHS 293 Query: 289 MSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 MSDP + YRTR+EI+ +R DPIE++RK +L + A+E +LK+IE RKI++ ++ A Sbjct: 294 MSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDIATEKELKDIEKEKRKIVDEAIAKA 353 Query: 348 QSDKEPDPAELYSDILI 364 + PDP+EL++++ + Sbjct: 354 KESAMPDPSELFTNVYV 370 >gi|281211968|gb|EFA86129.1| pyruvate dehydrogenase E1 alpha subunit [Polysphondylium pallidum PN500] Length = 784 Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 155/315 (49%), Positives = 215/315 (68%), Gaps = 5/315 (1%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE+ ++ + M +RR E A LY ++ GFCHL GQEAV GM+ ++T+ D +ITA Sbjct: 456 KEELITHFTDMTRMRRIEMVADSLYKKKLIRGFCHLYNGQEAVCTGMEAAITKNDHVITA 515 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+H +LA G ++AEL + G SKGKGGSMHMF+ + FYGG+GIVGAQ +G Sbjct: 516 YRDHTFMLARGATPESVLAELLMKSTGCSKGKGGSMHMFT--HNFYGGNGIVGAQCPVGA 573 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 GIAF KY + IC+ +GDGAANQGQ++E+FN+A LW+L +++ ENN++ MGTS +R Sbjct: 574 GIAFTQKYNNTGNICLTYYGDGAANQGQLFEAFNMAKLWDLPCVFICENNKFGMGTSQAR 633 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 A+A ++F R + I GM+VDGM++ AVK +CR+ KGP ++EM TYRY GHS Sbjct: 634 AAAGSDFYSR--AHFIAGMKVDGMNVLAVKQAGKFVADWCRSGKGPFVLEMDTYRYVGHS 691 Query: 289 MSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 MSDP +YRTR+E+NE+RS DPIE VR LL +K A+E DL IE R+ ++ + EFA Sbjct: 692 MSDPGTSYRTRDEVNEVRSIRDPIEYVRGLLLEHKLATEDDLTAIEEAAREEMDKAAEFA 751 Query: 348 QSDKEPDPAELYSDI 362 + PD ELY+++ Sbjct: 752 INSPMPDMRELYTNV 766 >gi|332373348|gb|AEE61815.1| unknown [Dendroctonus ponderosae] Length = 398 Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 158/317 (49%), Positives = 212/317 (66%), Gaps = 5/317 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + + L Y M IRR E AG LY ++ GFCHL GQEAV VG K +L D +I Sbjct: 57 LTRAEALDMYTQMHTIRRMETSAGNLYKDKIIRGFCHLYAGQEAVAVGFKHALRPQDSVI 116 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG GV ++++ELTGR+ G ++GKGGSMHM+ TKN FYGG+GIVGAQV L Sbjct: 117 TAYRAHGWTYVMGVPPIEVLSELTGRRTGCARGKGGSMHMY-TKN-FYGGNGIVGAQVPL 174 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+A A +Y+ +D +CV +GDGAANQGQV+E +N+A LWN+ I+V ENN Y MGTS Sbjct: 175 GVGVALAAQYKGTDGVCVALYGDGAANQGQVFEVYNMAKLWNIPCIFVCENNGYGMGTSA 234 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T + RG F +PG+ VDGMD+ AV+ AV YC A GPI+IE TYRY G Sbjct: 235 VRAAASTEYYTRG-DF-VPGIWVDGMDVLAVRQAARLAVNYCAAGNGPIVIEAQTYRYSG 292 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREE+ E+R DPI +++++ + + ++KEI+ +R I+ + + Sbjct: 293 HSMSDPGTSYRTREEVQEVRQTRDPITSFKEKIITSNLVTAEEIKEIDAKIRTEIDEATK 352 Query: 346 FAQSDKEPDPAELYSDI 362 A+++KE E+ SDI Sbjct: 353 KAKAEKEIGLDEIASDI 369 >gi|156362185|ref|XP_001625661.1| predicted protein [Nematostella vectensis] gi|156212504|gb|EDO33561.1| predicted protein [Nematostella vectensis] Length = 394 Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 155/314 (49%), Positives = 215/314 (68%), Gaps = 5/314 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L+ YR M ++RR E A LY ++ GFCHL GQEA VGM+ S+ + D +I Sbjct: 59 MTREEGLTYYRQMQIVRRMETAASNLYKSKVIRGFCHLYSGQEACCVGMEASIDKNDSVI 118 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG G A +++ ELTGR+ G ++GKGGSMHM+ + +YGG+GIVGAQV L Sbjct: 119 TAYRCHGWTYMRGRSAREVLCELTGRKTGCTQGKGGSMHMYGHE--YYGGNGIVGAQVPL 176 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIA A+K R + +IC+ +GDGAANQGQ++E++N+A LWNL I++ ENN Y MGTSV Sbjct: 177 GAGIALAHKLRGNGRICLTLYGDGAANQGQLFETYNMAKLWNLPCIFICENNGYGMGTSV 236 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T + RG IPG++VDGMD+ V+ AV Y R+ KGPI++E+ TYRY G Sbjct: 237 ERAAATTEYYSRGDY--IPGIRVDGMDVLTVREATKWAVDYARSGKGPILMELKTYRYYG 294 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YR+R+EI +R DPI +R++LL + AS D+K+IE + I+ +VE Sbjct: 295 HSMSDPGTSYRSRDEIQSVRKTRDPITGLREKLLDSGLASTDDIKKIEQEAKAEIDEAVE 354 Query: 346 FAQSDKEPDPAELY 359 A++D EP +L+ Sbjct: 355 CAKNDPEPPLDDLF 368 >gi|198471462|ref|XP_001355638.2| GA20040 [Drosophila pseudoobscura pseudoobscura] gi|198145926|gb|EAL32697.2| GA20040 [Drosophila pseudoobscura pseudoobscura] Length = 533 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 164/354 (46%), Positives = 223/354 (62%), Gaps = 16/354 (4%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVS----------EFNKEQELSAYRLMLLIRRFEEKA 69 S+SA S DC + F+ E +++ L Y ML +RR E A Sbjct: 43 SISADGRRHKSEDCNSVTLEHTFKCYDLDSGPPMDVELSRDDALKMYSQMLEVRRVETMA 102 Query: 70 GQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAEL 129 Y + GFCHL IGQEAV VGM + + D MITAYR H GV ++MAEL Sbjct: 103 SNYYKEKKIRGFCHLYIGQEAVAVGMHARMRKQDSMITAYRCHAWTYLMGVSIYEMMAEL 162 Query: 130 TGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGD 189 G + G S+GKGGSMHM+S + +YGG+GIVGAQV +G G+A A+++RR +C+VC+GD Sbjct: 163 LGVRTGCSRGKGGSMHMYSER--YYGGNGIVGAQVPVGAGVALAHQFRRDGGVCIVCYGD 220 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 GAANQGQV+E++NIA LW L I+V ENN YAMGT +RA+A T+F RG IPG+ V Sbjct: 221 GAANQGQVFEAYNIAKLWCLPCIFVCENNDYAMGTKANRAAASTDFYMRGQY--IPGLWV 278 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNH 308 DG + AV++ A+ Y +H GPI++EM TYRY GHSMSDP +YR+R+E+ +MR Sbjct: 279 DGNQVLAVRSATQFAIEYALSH-GPIVLEMNTYRYVGHSMSDPGTSYRSRDEVKQMREKR 337 Query: 309 DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 DPI R +++ A+E +LK+IE RK +++ + A DKE DP EL++D+ Sbjct: 338 DPITSFRGQIIALCLATEEELKKIETETRKRVDDDCKKAAKDKEVDPIELHADV 391 >gi|157849684|gb|ABV89625.1| pyruvate dehydrogenase complex E1 alpha subunit dehydrogenase [Brassica rapa] Length = 389 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 154/323 (47%), Positives = 220/323 (68%), Gaps = 10/323 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E + ++ LS +R M L+RR E A LY ++ GFCHL GQEAV +GM+ ++T+ D + Sbjct: 53 ESSTQELLSFFRTMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKKDAI 112 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H L G ++ AEL GRQ G S+GKGGSMH + + FYGGHGIVGAQV Sbjct: 113 ITAYRDHCIFLGRGGSLYEVFAELMGRQDGCSRGKGGSMHFYKKDSSFYGGHGIVGAQVP 172 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ Sbjct: 173 LGCGIAFAQKYSKEEAVTFAMYGDGAANQGQLFEALNISALWDLPSILVCENNHYGMGTA 232 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTY 282 RA+ ++ KRG +PG++VDGMD AVK +A + + H GPII+EM TY Sbjct: 233 EWRAAKSPSYYKRGD--YVPGLKVDGMDAFAVK----QACKFAKEHALKNGPIILEMDTY 286 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI+ +R DPIE+++K +L + A+E +LK++E +RK ++ Sbjct: 287 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVD 346 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 +++ A+ P+P+EL++++ + Sbjct: 347 DAIAKAKDCPMPEPSELFTNVYV 369 >gi|296235076|ref|XP_002762742.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 2 [Callithrix jacchus] Length = 401 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 177/346 (51%), Positives = 234/346 (67%), Gaps = 18/346 (5%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQE-----------AVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQ 133 C GQ A VG++ + D +ITAYR HG G+ +I+AELTGR+ Sbjct: 94 CDGQVGGRFVIELCYLACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRK 153 Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 GG +KGKGGSMHM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAAN Sbjct: 154 GGCAKGKGGSMHMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAAN 211 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 QGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMD Sbjct: 212 QGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMD 269 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIE 312 I V+ A AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI Sbjct: 270 ILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIM 329 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 330 LLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 375 >gi|242062580|ref|XP_002452579.1| hypothetical protein SORBIDRAFT_04g028450 [Sorghum bicolor] gi|241932410|gb|EES05555.1| hypothetical protein SORBIDRAFT_04g028450 [Sorghum bicolor] Length = 390 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 154/311 (49%), Positives = 209/311 (67%), Gaps = 10/311 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M L+RR E A LY ++ GFCHL GQEAV VGM+ ++T D +ITAYR+H Sbjct: 64 FRDMSLMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDHCTY 123 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D +EL GR+GG S+GKGGSMH + FYGGHGIVGAQV LG G+AFA K Sbjct: 124 LARGGDLVSAFSELMGREGGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQK 183 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y++ D +GDGAANQGQ++E+ NI+ALW L I V ENN Y MGT+ RA+ + Sbjct: 184 YKKEDTATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPAY 243 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP 292 KRG +PG++VDGMD+ AVK +A + + H GPI++EM TYRY GHSMSDP Sbjct: 244 YKRGD--YVPGLKVDGMDVLAVK----QACKFAKDHAVANGPIVLEMDTYRYHGHSMSDP 297 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YRTR+EI+ +R DPIE+VRK LL + A+ +LK++E +RK +++++ A+ Sbjct: 298 GSTYRTRDEISGVRQERDPIERVRKLLLTHDLATAAELKDMEKEIRKQVDDAIAKAKESS 357 Query: 352 EPDPAELYSDI 362 PD +EL++++ Sbjct: 358 MPDTSELFTNV 368 >gi|115448577|ref|NP_001048068.1| Os02g0739600 [Oryza sativa Japonica Group] gi|46390562|dbj|BAD16048.1| putative pyruvate dehydrogenase E1 alpha subunit [Oryza sativa Japonica Group] gi|113537599|dbj|BAF09982.1| Os02g0739600 [Oryza sativa Japonica Group] gi|125583627|gb|EAZ24558.1| hypothetical protein OsJ_08320 [Oryza sativa Japonica Group] gi|215704394|dbj|BAG93828.1| unnamed protein product [Oryza sativa Japonica Group] Length = 390 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 154/316 (48%), Positives = 211/316 (66%), Gaps = 10/316 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ +R M ++RR E A LY ++ GFCHL GQEAV VGM+ ++T D +ITAYR+H Sbjct: 61 LTFFRDMSVMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDH 120 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 LA G D AEL GRQ G S+GKGGSMH + FYGGHGIVGAQV LG G+AF Sbjct: 121 CTYLARGGDLVSAFAELMGRQAGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAF 180 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A KYR+ + +GDGAANQGQ++E+ NI+ALW L I V ENN Y MGT+ RA+ Sbjct: 181 AQKYRKEETATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKS 240 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSM 289 + KRG +PG++VDGMD+ AVK +A + + H GPI++EM TYRY GHSM Sbjct: 241 PAYYKRGD--YVPGLKVDGMDVLAVK----QACKFAKEHAIANGPIVLEMDTYRYHGHSM 294 Query: 290 SDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 SDP + YRTR+EI+ +R DPIE+VRK +L + A+ +LK++E +RK +++++ A+ Sbjct: 295 SDPGSTYRTRDEISGVRQERDPIERVRKLILAHDLATAAELKDMEKEIRKEVDDAIAKAK 354 Query: 349 SDKEPDPAELYSDILI 364 PD +EL++++ + Sbjct: 355 ESPMPDTSELFTNVYV 370 >gi|168020304|ref|XP_001762683.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686091|gb|EDQ72482.1| predicted protein [Physcomitrella patens subsp. patens] Length = 394 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 170/361 (47%), Positives = 233/361 (64%), Gaps = 20/361 (5%) Query: 16 ALNPSVSA-KRAATSSVDCV--DIPF-LEGFEVSEFNKEQELSA------YRLMLLIRRF 65 A+ P+V A R ++S D + DIP +G V ++ E SA ++ M ++RR Sbjct: 18 AIAPAVIAFARPLSTSADPIVLDIPVPFKGHNVEAPSQSVETSAQELVGFFKTMFVMRRM 77 Query: 66 EEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKI 125 E A LY + GFCHL GQEAV VGM+ +L E D +ITAYR+H L G ++ Sbjct: 78 EIAADSLYKSKFIRGFCHLYDGQEAVCVGMEAALNERDCIITAYRDHCTHLGRGGSVLEV 137 Query: 126 MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVV 185 AEL GR+ G S GKGGSMHM++ K GFYGG+GIVGAQ LG G+AFA KY ++D + + Sbjct: 138 FAELMGRKDGCSLGKGGSMHMYNKKGGFYGGNGIVGAQTPLGAGLAFAQKYLKADGVTLA 197 Query: 186 CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIP 245 +GDGAANQGQ++E+ NI+ALW+L VIYV ENN Y MGT+ R++ + KRG +P Sbjct: 198 MYGDGAANQGQLFEAMNISALWDLPVIYVCENNHYGMGTAEWRSAKSPEYYKRGD--YVP 255 Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP-ANYRTREEI 301 G++VDGMD AVK +AV + + H GP+++EM TYRY GHSMSDP + YRTR+EI Sbjct: 256 GLKVDGMDCLAVK----QAVKFAKEHALKNGPMVLEMDTYRYHGHSMSDPGSTYRTRDEI 311 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 + +R DPIE++RK L+ ++ AS DLK IE +K + +++ A+ PD EL+S Sbjct: 312 SGVRQERDPIERIRKLLVTHELASVADLKAIEKEAKKEVEDALAKAKESPAPDSEELFSH 371 Query: 362 I 362 I Sbjct: 372 I 372 >gi|324509582|gb|ADY44026.1| Pyruvate dehydrogenase E1 component subunit alpha type I [Ascaris suum] Length = 396 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 159/312 (50%), Positives = 204/312 (65%), Gaps = 6/312 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE + Y M IRR E AG LY V GFCHL GQEA VG K ++ GD +T Sbjct: 53 TKEDAVHYYTQMQTIRRMESAAGNLYKEKKVRGFCHLYSGQEACAVGTKAAMDAGDAAVT 112 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG G +K++ ELTGR G GKGGSMHM+ FYGG+GIVGAQ LG Sbjct: 113 AYRCHGWTYLSGSSVAKVLCELTGRITGNVYGKGGSMHMYG--ENFYGGNGIVGAQQPLG 170 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TGIAFA KYR+ +C+ FGDGA NQGQ++ES N+A LW+L V+YV ENN Y MGT+ + Sbjct: 171 TGIAFAMKYRKEKNVCITMFGDGATNQGQLFESMNMAKLWDLPVLYVCENNGYGMGTAAA 230 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R+SA T++ RG +PG+ VDGMD+ AV+ + A +C A KGP++IEM TYRY GH Sbjct: 231 RSSASTDYYTRGDY--VPGIWVDGMDVLAVRQAVRWAKEWCNAGKGPLMIEMATYRYSGH 288 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YRTREE+ E+R DPI + +++ +E ++KEI+ VRK I+ +V+ Sbjct: 289 SMSDPGTSYRTREEVQEVRKTRDPITGFKDKIVTAGLVTEDEIKEIDKQVRKEIDAAVKQ 348 Query: 347 AQSDKEPDPAEL 358 A +DKE P EL Sbjct: 349 AHTDKE-SPVEL 359 >gi|242092600|ref|XP_002436790.1| hypothetical protein SORBIDRAFT_10g008820 [Sorghum bicolor] gi|241915013|gb|EER88157.1| hypothetical protein SORBIDRAFT_10g008820 [Sorghum bicolor] Length = 395 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 161/335 (48%), Positives = 218/335 (65%), Gaps = 14/335 (4%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 VD P E + + LS +R M L+RR E A LY ++ GFCHL GQEAV V Sbjct: 51 VDAPSREATTTAR----ELLSFFRDMSLMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAV 106 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 GM+ ++T D +ITAYR+H LA G D AEL GR+ G S+GKGGSMH + F Sbjct: 107 GMEAAITRADAIITAYRDHCAYLARGGDLVAAFAELMGRRDGCSRGKGGSMHFYKRDANF 166 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 +GGHGIVGAQV LG GIAFA +YR+ + +GDGAANQGQ++E+ N+AALW L V+ Sbjct: 167 FGGHGIVGAQVPLGCGIAFAQRYRKEGTVTFDLYGDGAANQGQLFEALNMAALWKLPVVL 226 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH-- 271 V ENN Y MGT+ RAS + KRG +PG++VDGMD+ AVK +A + + H Sbjct: 227 VCENNHYGMGTAEWRASKSPAYYKRGD--YVPGLKVDGMDVLAVK----QACKFAKEHVL 280 Query: 272 -KGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 GPII+EM TYRY GHSMSDP + YRTR EI +R DPIE+VRK +L +++A+ +L Sbjct: 281 ENGPIILEMDTYRYHGHSMSDPGSTYRTRNEIAGIRQERDPIERVRKLILAHEFATAQEL 340 Query: 330 KEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 K++E +RK ++ ++ A+ PDP+EL++++ + Sbjct: 341 KDMEKEIRKQVDAAIAKAKESPMPDPSELFTNVYV 375 >gi|76160956|gb|ABA40441.1| unknown [Solanum tuberosum] Length = 391 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 153/323 (47%), Positives = 219/323 (67%), Gaps = 10/323 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E + ++ ++ ++ M +RR E A LY ++ GFCHL GQEAV VGM+ ++T+ D + Sbjct: 55 ETSPKELMTFFKDMTEMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCI 114 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H L G + AEL GR+ G S+GKGGSMH + +NGFYGGHGIVGAQV Sbjct: 115 ITAYRDHCIFLGRGGTLVESFAELMGRRDGCSRGKGGSMHFYKKENGFYGGHGIVGAQVP 174 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA KY++ D + +GDGAANQGQ++E+ N+AALW+L I V ENN Y MGT+ Sbjct: 175 LGIGLAFAQKYKKEDYVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTA 234 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTY 282 RA+ + KRG +PG++VDGMD+ AVK +A + + H GPII+EM TY Sbjct: 235 EWRAAKSPAYYKRGD--YVPGLRVDGMDVFAVK----QACTFAKQHALKNGPIILEMDTY 288 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI+ +R DP+E++R +L + A+E +LK+IE RK+++ Sbjct: 289 RYHGHSMSDPGSTYRTRDEISGVRQERDPVERIRSLILAHNIATEAELKDIEKENRKVVD 348 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 ++ A+ PDP+EL++++ + Sbjct: 349 EAIAKAKESPMPDPSELFTNVYV 371 >gi|12003246|gb|AAG43499.1|AF209924_1 pyruvate dehydrogenase [Solanum lycopersicum] Length = 391 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 162/354 (45%), Positives = 229/354 (64%), Gaps = 18/354 (5%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLL------IRRFEEKAGQLYG 74 +S+ AT +V+ +PF V ++ E S LM +RR E A LY Sbjct: 26 LSSDSTATITVE-TSLPFTS-HNVDPPSRSVETSPMELMTFFKDMTEMRRMEIAADSLYK 83 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 ++ GFCHL GQEAV VGM+ ++T+ D +ITAYR+H L G + AEL GR+ Sbjct: 84 AKLIRGFCHLYDGQEAVAVGMEAAITKKDCIITAYRDHCIFLGRGGTLVESFAELMGRRD 143 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G S+GKGGSMH + ++GFYGGHGIVGAQV LG G+AFA KY++ D + +GDGAANQ Sbjct: 144 GCSRGKGGSMHFYKKESGFYGGHGIVGAQVPLGIGLAFAQKYKKEDYVTFAMYGDGAANQ 203 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 GQ++E+ N+AALW+L I V ENN Y MGT+ RA+ + KRG +PG++VDGMD+ Sbjct: 204 GQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGD--YVPGLRVDGMDV 261 Query: 255 RAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDP 310 AVK +A A+ + H GPII+EM TYRY GHSMSDP + YRTR+EI+ +R DP Sbjct: 262 FAVK----QACAFAKQHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDP 317 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 +E++R +L + A+E +LK+IE RK+++ ++ A+ PDP+EL++++ + Sbjct: 318 VERIRSLILAHNIATEAELKDIEKENRKVVDEAIRKAKESPMPDPSELFTNVYV 371 >gi|1709453|sp|P52903|ODPA_SOLTU RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|473169|emb|CAA81558.1| E1 alpha subunit of pyruvate dehydrogenase precursor [Solanum tuberosum] Length = 391 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 152/323 (47%), Positives = 219/323 (67%), Gaps = 10/323 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E + ++ ++ ++ M +RR E A LY ++ GFCHL GQEAV VGM+ ++T+ D + Sbjct: 55 ETSPKELMTFFKDMTEMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCI 114 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H L G + AEL GR+ G S+GKGGSMH + ++GFYGGHGIVGAQV Sbjct: 115 ITAYRDHCIFLGRGGTLVEAFAELMGRRDGCSRGKGGSMHFYKKESGFYGGHGIVGAQVP 174 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA KY++ D + +GDGAANQGQ++E+ N+AALW+L I V ENN Y MGT+ Sbjct: 175 LGIGLAFAQKYKKEDYVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTA 234 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTY 282 RA+ + KRG +PG++VDGMD+ AVK +A + + H GPII+EM TY Sbjct: 235 EWRAAKSPAYYKRGD--YVPGLRVDGMDVFAVK----QACTFAKQHALKNGPIILEMDTY 288 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI+ +R DP+E++R +L + A+E +LK+IE RK+++ Sbjct: 289 RYHGHSMSDPGSTYRTRDEISGVRQERDPVERIRSLILAHNIATEAELKDIEKENRKVVD 348 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 ++ A+ PDP+EL++++ + Sbjct: 349 EAIAKAKESPMPDPSELFTNVYV 371 >gi|226494977|ref|NP_001150259.1| pyruvate dehydrogenase E1 component alpha subunit [Zea mays] gi|195637880|gb|ACG38408.1| pyruvate dehydrogenase E1 component alpha subunit [Zea mays] Length = 390 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 153/311 (49%), Positives = 209/311 (67%), Gaps = 10/311 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M L+RR E A LY ++ GFCHL GQEAV VGM+ ++T D +ITAYR+H Sbjct: 64 FRDMSLMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDHCTY 123 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D +EL GR+GG S+GKGGSMH + FYGGHGIVGAQV LG G+AFA K Sbjct: 124 LARGGDLVSAFSELMGREGGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQK 183 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y++ + +GDGAANQGQ++E+ NI+ALW L I V ENN Y MGT+ RA+ + Sbjct: 184 YKKEETATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPAY 243 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP 292 KRG +PG++VDGMD+ AVK +A + + H GPI++EM TYRY GHSMSDP Sbjct: 244 YKRGD--YVPGLKVDGMDVLAVK----QACKFAKDHAVANGPIVLEMDTYRYHGHSMSDP 297 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YRTR+EI+ +R DPIE+VRK LL + A+ +LK++E +RK +++++ A+ Sbjct: 298 GSTYRTRDEISGVRQERDPIERVRKLLLAHDLATAAELKDMEKEIRKQVDDAIAKAKESS 357 Query: 352 EPDPAELYSDI 362 PD +EL++++ Sbjct: 358 MPDTSELFTNV 368 >gi|196005995|ref|XP_002112864.1| expressed hypothetical protein [Trichoplax adhaerens] gi|190584905|gb|EDV24974.1| expressed hypothetical protein [Trichoplax adhaerens] Length = 389 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 154/317 (48%), Positives = 215/317 (67%), Gaps = 5/317 (1%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 + + L Y+ M IRR E A LY + GFCHL GQEA VG++ ++T D +ITA Sbjct: 55 RSEALQYYKQMQTIRRLEVTADNLYKSKQIRGFCHLYNGQEACAVGIEAAITPEDSIITA 114 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR HG GV ++AEL G + G ++GKGGSMHM+ KN FYGG+GIVGAQV LG Sbjct: 115 YRAHGWTYLRGVSVEGVLAELIGHENGCARGKGGSMHMYG-KN-FYGGNGIVGAQVPLGA 172 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 GIAFA+KY + +K+C+ +GDGAANQGQV+E+FN+A LW+L I+V ENN+Y MGTSV R Sbjct: 173 GIAFAHKYNKDNKVCITLYGDGAANQGQVFETFNMAKLWSLPCIFVCENNKYGMGTSVER 232 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASA T + RG IPG++ +G D+ V+ A +CR KGPIIIE+ TYRY+GHS Sbjct: 233 ASASTEYYTRGDY--IPGIRANGHDVITVREVTKFAADWCRNGKGPIIIELETYRYKGHS 290 Query: 289 MSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 +SDP +YRTR+EI+ +R DPI ++K+LL + A+E ++K I+ ++ ++ ++ A Sbjct: 291 VSDPGISYRTRDEIDHVRKTSDPIAMLKKKLLDSSLATEDEIKGIDNEIKNYVSGELKKA 350 Query: 348 QSDKEPDPAELYSDILI 364 Q+ KE +LY+D+ + Sbjct: 351 QNGKELPLEDLYNDVYV 367 >gi|255558342|ref|XP_002520198.1| pyruvate dehydrogenase, putative [Ricinus communis] gi|223540690|gb|EEF42253.1| pyruvate dehydrogenase, putative [Ricinus communis] Length = 399 Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 151/318 (47%), Positives = 216/318 (67%), Gaps = 4/318 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++ LS +R M +RR E A LY ++ GFCHL GQEAV VGM+ ++T+ D +IT Sbjct: 65 TPQELLSFFRDMATMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCIIT 124 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR+H + G ++ AEL GR+ G S+GKGGSMH + + GFYGGHGIVGAQ+ LG Sbjct: 125 AYRDHCTFVGRGGTMLQVFAELMGRKDGCSRGKGGSMHFYKKEAGFYGGHGIVGAQIPLG 184 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+AFA KY + + + +GDGAANQGQ++E+ NI+ALW+L VI V ENN Y MGT+ Sbjct: 185 CGLAFAQKYNKDETVTFALYGDGAANQGQLFEALNISALWDLPVILVCENNHYGMGTAEW 244 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RA+ + KRG +PG++VDGMD+ AVK A + GP+I+EM TYRY GH Sbjct: 245 RAAKSPAYYKRGD--YVPGLKVDGMDVLAVKQACKFAKEFV-LKNGPLILEMDTYRYHGH 301 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP + YRTR+EI+ +R DPIE++RK +L + A+E +LK++E +RK I++++ Sbjct: 302 SMSDPGSTYRTRDEISGVRQERDPIERIRKVILAHDLATEKELKDMEKEIRKEIDDAIAQ 361 Query: 347 AQSDKEPDPAELYSDILI 364 A+ P+P+EL++++ + Sbjct: 362 AKESPMPEPSELFTNVYV 379 >gi|322697184|gb|EFY88967.1| pyruvate dehydrogenase E1 component alpha subunit [Metarhizium acridum CQMa 102] Length = 408 Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 168/371 (45%), Positives = 234/371 (63%), Gaps = 14/371 (3%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAY 56 +A + VT +L+ SV V D F E +E+ E K++ Y Sbjct: 24 LASRSVTTDAASASLHNSVPQSEDEPFQVALSDESF-ETYELDPPSYTIEVTKKELKKMY 82 Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 M+ IR+ E A +LY + GFCHL GQEAV VG++ ++T+ D +ITAYR HG L Sbjct: 83 YDMVTIRQMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAITKLDDIITAYRCHGFAL 142 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G I+ EL GR+ GI+ GKGGSMHMFS GFYGG+GIVGAQV +G G+AFA+KY Sbjct: 143 MRGGTVRSIIGELLGRREGIAYGKGGSMHMFS--KGFYGGNGIVGAQVPVGAGLAFAHKY 200 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 S ++ +GDGA+NQGQV+E+FN+A LWNL ++ ENN+Y MGTS +R+SA T++ Sbjct: 201 NDSKTASIILYGDGASNQGQVFEAFNMAKLWNLPALFGCENNKYGMGTSAARSSALTDYY 260 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANY 295 KRG IPG++V+GMD+ AVKA + + A KGP+++E +TYRY GHSMSDP Y Sbjct: 261 KRGQY--IPGLKVNGMDVLAVKAAVKYGKEWTAADKGPMVLEYVTYRYGGHSMSDPGTTY 318 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ--SDKEP 353 RTREEI MRS +DPI +++++L + +E +LK+I+ R +N V A+ + EP Sbjct: 319 RTREEIQRMRSTNDPIAGLKQKILDWEVTTEDELKKIDKEARSHVNEEVAIAEAMAVPEP 378 Query: 354 DPAELYSDILI 364 P+ L+ DI + Sbjct: 379 KPSILFEDIYV 389 >gi|315186557|gb|EFU20316.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Spirochaeta thermophila DSM 6578] Length = 340 Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 151/308 (49%), Positives = 210/308 (68%), Gaps = 5/308 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMITAYREHGHI 115 R MLLIR FEEK+ Q+YG+ +GGFCHL IGQEAV VG ++ D ++TAYR+HGH Sbjct: 26 REMLLIRVFEEKSAQMYGLRKIGGFCHLYIGQEAVAVGSIAAIDLAKDYVVTAYRDHGHA 85 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LACG+D +MAEL G+ G S+GKGGSMHMF + F GG+GIVGAQ+ +GTG+AFA K Sbjct: 86 LACGMDPKVVMAELFGKVTGCSRGKGGSMHMFDVEKHFLGGNGIVGAQIPVGTGVAFAQK 145 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y + + +V FGDGA +QG +E+ N+A +W L V+Y+ ENNQ+ MGT + SA + Sbjct: 146 YEGTGGVTLVYFGDGAIHQGAFHEALNLAKIWELPVVYICENNQWGMGTFWKKVSAVADL 205 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPAN 294 K G +++IPG+QVDGMD+RAV +AV+ RA +G P++IE TYRY+GHSMSDPA Sbjct: 206 YKLGAAYDIPGVQVDGMDVRAVYEATTEAVS--RAREGDPVLIEARTYRYKGHSMSDPAK 263 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRTREE+ E + DPI +++ + E + + ++K ++ +VEFA+ +EP Sbjct: 264 YRTREELEEYK-RQDPIGRLKTFMEEEGLLEEKTFRALYEEIQKEVDEAVEFAERSEEPA 322 Query: 355 PAELYSDI 362 +Y D+ Sbjct: 323 LHTIYEDV 330 >gi|195638880|gb|ACG38908.1| pyruvate dehydrogenase E1 component alpha subunit [Zea mays] Length = 390 Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 153/311 (49%), Positives = 208/311 (66%), Gaps = 10/311 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M L+RR E A LY ++ GFCHL GQEAV VGM+ ++T D +ITAYR+H Sbjct: 64 FRDMSLMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDHCTY 123 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D +EL GR+GG S+GKGGSMH + FYGGHGIVGAQV LG G+AFA K Sbjct: 124 LARGGDLVSAFSELMGREGGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQK 183 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y+ + +GDGAANQGQ++E+ NI+ALW L I V ENN Y MGT+ RA+ + Sbjct: 184 YKEEETATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPAY 243 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP 292 KRG +PG++VDGMD+ AVK +A + + H GPI++EM TYRY GHSMSDP Sbjct: 244 YKRGD--YVPGLKVDGMDVLAVK----QACKFAKDHAVANGPIVLEMDTYRYHGHSMSDP 297 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YRTR+EI+ +R DPIE+VRK LL + A+ +LK++E +RK +++++ A+ Sbjct: 298 GSTYRTRDEISGVRQERDPIERVRKLLLAHDLATAAELKDMEKEIRKQVDDAIAKAKESS 357 Query: 352 EPDPAELYSDI 362 PD +EL++++ Sbjct: 358 MPDTSELFTNV 368 >gi|16758900|ref|NP_446446.1| pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial precursor [Rattus norvegicus] gi|548412|sp|Q06437|ODPAT_RAT RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; AltName: Full=PDHE1-A type II; Flags: Precursor gi|57655|emb|CAA79318.1| pyruvate dehydrogenase (lipoamide) [Rattus rattus] gi|2351254|gb|AAB68458.1| pyruvate dehydrogenase E1 alpha subunit [Rattus norvegicus] gi|51259267|gb|AAH78757.1| Pyruvate dehydrogenase (lipoamide) alpha 2 [Rattus norvegicus] gi|149026095|gb|EDL82338.1| rCG29007 [Rattus norvegicus] Length = 391 Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 165/335 (49%), Positives = 232/335 (69%), Gaps = 7/335 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G S +E+ L YR M +IRR E KA QLY + GFCHL Sbjct: 35 ATCDIKKCDLYLLEQGPPTSTVLTREEALKYYRNMQVIRRMELKADQLYKQKFIRGFCHL 94 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +IT+YR HG G+ I+AELTGR+GG +KGKGGSM Sbjct: 95 CDGQEACNVGLEAGINPTDHIITSYRAHGLCYTRGLSVKSILAELTGRKGGCAKGKGGSM 154 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQV LG G+A A KY ++ +IC+ +GDGAANQGQV+E++N++ Sbjct: 155 HMYA-KN-FYGGNGIVGAQVPLGAGVALACKYLKNGQICLALYGDGAANQGQVFEAYNMS 212 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L +++ ENN+Y MGT++ R++A T++ K+G F IPG++V+GMDI +V+ A Sbjct: 213 ALWKLPCVFICENNRYGMGTAIERSAASTDYHKKG--FVIPGLRVNGMDILSVREATKFA 270 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 +CR+ KGPI++E+ TYRY GHSMSDP +YRTREE+ +RS DPI +R+R++ N Sbjct: 271 ADHCRSGKGPIVMELQTYRYHGHSMSDPGISYRTREEVQNVRSKSDPIMLLRERMISNNL 330 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +S +LKEI+ +V+K + + +FA +D EP +L Sbjct: 331 SSVEELKEIDADVKKEVEEAAQFATTDPEPPLEDL 365 >gi|328770234|gb|EGF80276.1| hypothetical protein BATDEDRAFT_19685 [Batrachochytrium dendrobatidis JAM81] Length = 392 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 155/321 (48%), Positives = 216/321 (67%), Gaps = 14/321 (4%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + + L+ Y M+LIRR E Y ++ GFCHL GQEA+ GM+ ++T+ D +IT Sbjct: 59 TRSELLAFYENMVLIRRLETACDNAYKGKLIRGFCHLSTGQEAIASGMEAAITKADSIIT 118 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG + G ++I++EL GR+ G SKGKGGSMH+F+ + FYGG+GIVGAQV +G Sbjct: 119 AYRCHGFTMNRGGTPTEIISELMGRRAGSSKGKGGSMHLFAPE--FYGGNGIVGAQVPVG 176 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIA A++Y++ D +C +GDGAANQGQV+E++N+A LWNL V +V ENN Y MGT Sbjct: 177 AGIALAHQYQKKDAMCFSMYGDGAANQGQVFEAYNMAKLWNLPVAFVCENNMYGMGTPAG 236 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR-----AHKGPIIIEMLTY 282 RA+A T + RG +PG++VDGMD+ AV+ +A Y R KGPI++EM+TY Sbjct: 237 RAAASTKYFTRGD--YVPGVRVDGMDVLAVR----EACRYARDWTVTQAKGPIVLEMVTY 290 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP YRTREEI MRS D I +++++L A+E +LK IE R I+ Sbjct: 291 RYGGHSMSDPGTTYRTREEIQRMRSTSDCINLLKEKILSTNSATEDELKAIEKKARAEID 350 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 +VE +++ EPD +EL++D+ Sbjct: 351 QAVEESKASPEPDMSELFTDV 371 >gi|195626494|gb|ACG35077.1| pyruvate dehydrogenase E1 component alpha subunit [Zea mays] Length = 390 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 153/311 (49%), Positives = 207/311 (66%), Gaps = 10/311 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M L+RR E A LY ++ GFCHL GQEAV VGM+ ++T D +ITAYR+H Sbjct: 64 FRDMSLMRRMEIAADSLYKAKLIXGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDHCTY 123 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D +EL GR+ G S+GKGGSMH + FYGGHGIVGAQV LG G+AFA K Sbjct: 124 LARGGDLVSAFSELMGREAGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQK 183 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y++ D +GDGAANQGQ++E+ NI+ALW L I V ENN Y MGT+ RA+ + Sbjct: 184 YKKEDTATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPAY 243 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP 292 KRG +PG++VDGMD+ AVK +A + + H GPI++EM TYRY GHSMSDP Sbjct: 244 YKRGD--YVPGLKVDGMDVLAVK----QACKFAKDHAVANGPIVLEMDTYRYHGHSMSDP 297 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YRTR+EI+ +R DPIE+VRK LL + A+ +LK +E +RK +++++ A+ Sbjct: 298 GSTYRTRDEISGVRQERDPIERVRKLLLTHDLANAAELKNMEKEIRKQVDDAIAKAKESS 357 Query: 352 EPDPAELYSDI 362 PD +EL++++ Sbjct: 358 MPDTSELFTNV 368 >gi|56754181|gb|AAW25278.1| SJCHGC01355 protein [Schistosoma japonicum] Length = 392 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 157/319 (49%), Positives = 205/319 (64%), Gaps = 5/319 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E ++ L + IRR E G LY + GFCHL GQEAV VG++ +L GD Sbjct: 52 TECTRDDALKYLETLHCIRRMETALGNLYKEKHIRGFCHLYSGQEAVAVGIEAALQPGDT 111 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR HG + GV I+AEL G++ G +KG GGSMH+++ FYGG+GIVGAQV Sbjct: 112 IITAYRCHGFTMTRGVPVHDIVAELAGKKTGCTKGVGGSMHLYA--KDFYGGNGIVGAQV 169 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG GIA KYR + V +GDGAANQGQV+E+FN+A LWNL VI++ ENN+Y MGT Sbjct: 170 PLGVGIALRMKYRGEKSVSVTLYGDGAANQGQVFEAFNMAKLWNLPVIFICENNKYGMGT 229 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV RASA TN+ RG IPG+ VDGMD+ V+ A +CR+ KGPI++E TYRY Sbjct: 230 SVDRASANTNYYTRGDY--IPGLWVDGMDVLTVREATRFAADWCRSDKGPILLETETYRY 287 Query: 285 RGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHSMSDP +YRTREE+ MR DPI +K ++ N ++ + KEIE VR ++ Sbjct: 288 HGHSMSDPGTSYRTREEVQSMRRGRDPIALFQKSIIDNGLCTQDEAKEIEKRVRTEVDKD 347 Query: 344 VEFAQSDKEPDPAELYSDI 362 VE A +D EP ++ +I Sbjct: 348 VEKALNDSEPPLETMFGNI 366 >gi|194694306|gb|ACF81237.1| unknown [Zea mays] Length = 390 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 153/311 (49%), Positives = 207/311 (66%), Gaps = 10/311 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M L+RR E A LY ++ GFCHL GQEAV VGM+ ++T D +ITAYR+H Sbjct: 64 FRDMSLMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDHCTY 123 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D +EL GR+ G S+GKGGSMH + FYGGHGIVGAQV LG G+AFA K Sbjct: 124 LARGGDLVSAFSELMGREAGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQK 183 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y++ D +GDGAANQGQ++E+ NI+ALW L I V ENN Y MGT+ RA+ + Sbjct: 184 YKKEDTATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPAY 243 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP 292 KRG +PG++VDGMD+ AVK +A + + H GPI++EM TYRY GHSMSDP Sbjct: 244 YKRGD--YVPGLKVDGMDVLAVK----QACKFAKDHAVANGPIVLEMDTYRYHGHSMSDP 297 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YRTR+EI+ +R DPIE+VRK LL + A+ +LK +E +RK +++++ A+ Sbjct: 298 GSTYRTRDEISGVRQERDPIERVRKLLLTHDLANAAELKNMEKEIRKQVDDAIAKAKESS 357 Query: 352 EPDPAELYSDI 362 PD +EL++++ Sbjct: 358 MPDTSELFTNV 368 >gi|3851005|gb|AAC72195.1| pyruvate dehydrogenase E1 alpha subunit [Zea mays] Length = 392 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 153/311 (49%), Positives = 207/311 (66%), Gaps = 10/311 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M L+RR E A LY ++ GFCHL GQEAV VGM+ ++T D +ITAYR+H Sbjct: 66 FRDMSLMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDHCTY 125 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D +EL GR+ G S+GKGGSMH + FYGGHGIVGAQV LG G+AFA K Sbjct: 126 LARGGDLVSAFSELMGREAGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQK 185 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y++ D +GDGAANQGQ++E+ NI+ALW L I V ENN Y MGT+ RA+ + Sbjct: 186 YKKEDTATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPAY 245 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP 292 KRG +PG++VDGMD+ AVK +A + + H GPI++EM TYRY GHSMSDP Sbjct: 246 YKRGD--YVPGLKVDGMDVLAVK----QACKFAKDHAVANGPIVLEMDTYRYHGHSMSDP 299 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YRTR+EI+ +R DPIE+VRK LL + A+ +LK +E +RK +++++ A+ Sbjct: 300 GSTYRTRDEISGVRQERDPIERVRKLLLTHDLANAAELKNMEKEIRKQVDDAIAKAKESS 359 Query: 352 EPDPAELYSDI 362 PD +EL++++ Sbjct: 360 MPDTSELFTNV 370 >gi|225443286|ref|XP_002274285.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|147810628|emb|CAN74103.1| hypothetical protein VITISV_035154 [Vitis vinifera] Length = 398 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 154/323 (47%), Positives = 216/323 (66%), Gaps = 10/323 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E ++ L +R M L+RR E + LY ++ GFCHL GQEAV VGM+ ++T D + Sbjct: 62 ETTPKEVLGFFRDMALMRRMEIASDSLYKSKLIRGFCHLYDGQEAVAVGMEAAITRRDCI 121 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H L G + +EL GRQ G SKGKGGSMH + +NGFYGGHGIVGAQ+ Sbjct: 122 ITAYRDHCIYLGRGGTLFECFSELMGRQSGCSKGKGGSMHFYKKENGFYGGHGIVGAQIP 181 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA KY + + + +GDGAANQGQ++E+ N+AALW+L I V ENN Y MGT+ Sbjct: 182 LGCGLAFAQKYSKDETVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTA 241 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTY 282 RA+ + KRG +PG++VDGMD+ AVK +A + + H GPII+EM TY Sbjct: 242 EWRAAKSPAYYKRGD--YVPGLKVDGMDVLAVK----QACRFAKEHALKNGPIILEMDTY 295 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI+ +R D IE+VRK +L ++ ++E +LK IE +R ++ Sbjct: 296 RYHGHSMSDPGSTYRTRDEISGVRQERDAIERVRKLILSHELSTEAELKSIEKEIRGQVD 355 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 +++ A+ PDP+EL++++ + Sbjct: 356 DAIARAKESPMPDPSELFTNVYV 378 >gi|311745377|ref|ZP_07719162.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Algoriphagus sp. PR1] gi|126577922|gb|EAZ82142.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Algoriphagus sp. PR1] Length = 339 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 154/319 (48%), Positives = 207/319 (64%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +++KE Y MLL+RRFEEKAGQLYG + GFCHL IGQEA G +L + D+ Sbjct: 13 KYSKETYSYWYESMLLMRRFEEKAGQLYGQQKIRGFCHLYIGQEACASGAITALEKDDKW 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR H H L G D +MAEL G+ G +KGKGGSMH+F + F GGHGIVGAQV Sbjct: 73 ITAYRCHAHPLGLGTDPGAVMAELFGKATGTTKGKGGSMHIFDKEKNFMGGHGIVGAQVP 132 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G GI FA KY+ S +C+ GDGA QG +E+ N+A L+ VI+VIENN YAMGT+ Sbjct: 133 MGLGIGFAEKYKGSKNLCICYMGDGAVRQGAFHEAMNLAMLYKTPVIFVIENNGYAMGTA 192 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R+S + S G S+++P VDGM++ AV + +A + GP ++EM TYRY+ Sbjct: 193 VKRSSNVDDLSTLGESYDMPSFAVDGMNVEAVHEAVAEAADRAKRGDGPTLLEMRTYRYK 252 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDP YRT+EE+ E + DP+EQV K + NK SE ++KEI V+K + ++V+ Sbjct: 253 GHSMSDPQKYRTKEEVEEYK-QRDPVEQVLKTIQDNKILSEDEIKEIVDKVKKKVTDAVK 311 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ PD + + D+ + Sbjct: 312 FAEESPWPDGQDAFKDVYV 330 >gi|158297863|ref|XP_318026.4| AGAP004786-PA [Anopheles gambiae str. PEST] gi|157014531|gb|EAA13136.4| AGAP004786-PA [Anopheles gambiae str. PEST] Length = 397 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 159/317 (50%), Positives = 208/317 (65%), Gaps = 5/317 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KE L Y M IRR E AG LY ++ GFCHL GQEA VGM+ ++ D I Sbjct: 55 LTKEDALKYYGQMYTIRRMETAAGNLYKEKVIRGFCHLYSGQEACAVGMRAAMRPEDSCI 114 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG GV ++AELTGR G ++GKGGSMHM+ KN FYGG+GIVGAQV L Sbjct: 115 TAYRCHGWTYLMGVSPVGVLAELTGRSSGCARGKGGSMHMYG-KN-FYGGNGIVGAQVPL 172 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GI FA KY + C+ +GDGAANQGQ++E +N+A LWN I+V ENN Y MGTS Sbjct: 173 GVGIGFAAKYNGTQGACIALYGDGAANQGQLFEVYNMAKLWNAPCIFVCENNGYGMGTSA 232 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA TN+ RG F +PG+ VDGMD+ AV+ A+ + + KGPI++E TYRY G Sbjct: 233 ERASANTNYYTRG-DF-VPGIWVDGMDVLAVREATRFALEHTSSGKGPILMETATYRYSG 290 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YR+R+EI E+R DPI +R+++L + A+ +LKEIE +R ++++ + Sbjct: 291 HSMSDPGTSYRSRDEIAEVRQTRDPITSLREKILTTELATVEELKEIEGKIRAEVDSATK 350 Query: 346 FAQSDKEPDPAELYSDI 362 A++DKE EL +DI Sbjct: 351 VAKTDKEISVDELTADI 367 >gi|153792309|ref|NP_001093304.1| pyruvate dehydrogenase [Bombyx mori] gi|146738085|gb|ABQ42597.1| L(B002) [Bombyx mori] Length = 399 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 153/351 (43%), Positives = 224/351 (63%), Gaps = 7/351 (1%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVSE--FNKEQELSAYRLMLLIRRFEEKAGQL 72 +A N S K+ AT + + L+ + E L Y + ++RR E +G L Sbjct: 25 VATNAKYSTKKEATFEIKPYKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNL 84 Query: 73 YGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR 132 Y ++ GFCHL GQEAV VGM+ ++ + D +ITAYR HG GV +++ELTGR Sbjct: 85 YKEKIIRGFCHLYSGQEAVAVGMRAAMRDADSVITAYRCHGWTYLMGVSVLGVLSELTGR 144 Query: 133 QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAA 192 + G S+GKGGSMH++ FYGG+GIVGAQV LG G+AFA+KYR + +GDGAA Sbjct: 145 RTGCSRGKGGSMHLYG--RNFYGGNGIVGAQVPLGAGVAFAHKYRADGGVTFALYGDGAA 202 Query: 193 NQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 NQGQ++E++N++ LW+L ++V ENN Y MGTSV R+SA T + RG +PG+ VDGM Sbjct: 203 NQGQLFEAYNMSKLWDLPCVFVCENNGYGMGTSVDRSSASTEYYTRGDY--VPGVWVDGM 260 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPI 311 D+ A + A+ YC A KGP+++EM TYRY GHSMSDP +YRTR+E+ E+R DPI Sbjct: 261 DVLATREAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPI 320 Query: 312 EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++++L+++ + LK+I+ VRK ++ + + ++++ E EL +DI Sbjct: 321 TSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADI 371 >gi|294661177|ref|YP_003573052.1| hypothetical protein Aasi_1605 [Candidatus Amoebophilus asiaticus 5a2] gi|227336327|gb|ACP20924.1| hypothetical protein Aasi_1605 [Candidatus Amoebophilus asiaticus 5a2] Length = 345 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 155/319 (48%), Positives = 207/319 (64%), Gaps = 4/319 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++KE L Y MLL+R+FEEK+GQLYG + GFCHL GQEA I G +L GD+ I Sbjct: 21 YSKEIYLFWYERMLLMRKFEEKSGQLYGQQKIKGFCHLYNGQEACIAGAVTALQPGDKYI 80 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR+H H +A G D IMAEL GR GISKGKGGSMH+F + F+GGHGIVG Q+ L Sbjct: 81 TAYRDHAHPIALGTDVKYIMAELYGRATGISKGKGGSMHIFDKEKNFFGGHGIVGGQIPL 140 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIAFA KY+ ++ +C+ GDGA QG +E+ N+A L+ L VI+VIENN YAMGTSV Sbjct: 141 GVGIAFAEKYKGTNNLCITFMGDGAVRQGAFHEALNLAMLYELPVIFVIENNGYAMGTSV 200 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYR 285 R+S T K G ++++ V M++ V + +A RA KG P ++E TYRY+ Sbjct: 201 QRSSNLTELYKLGSAYDMYSEAVQAMEVEKVHEAVSQAAE--RARKGIPSLLEFKTYRYK 258 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS+SDPA YR +EE+ E D IE VR +L N+ ASE ++ I+ + + I +V+ Sbjct: 259 GHSISDPATYRDKEEL-ETHRQRDSIEAVRNTILVNRIASEEEISGIDERINQEIIAAVK 317 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ P+P E Y D+ + Sbjct: 318 FAEESDFPNPEEAYQDVYV 336 >gi|307719638|ref|YP_003875170.1| pyruvate dehydrogenase E1 component subunit alpha [Spirochaeta thermophila DSM 6192] gi|306533363|gb|ADN02897.1| pyruvate dehydrogenase E1 component, subunit alpha [Spirochaeta thermophila DSM 6192] Length = 338 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 151/308 (49%), Positives = 209/308 (67%), Gaps = 5/308 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMITAYREHGHI 115 R MLLIR FEEKA Q+YG+ +GGFCHL IGQEAV VG ++ D ++TAYR+HGH Sbjct: 24 REMLLIRLFEEKAAQMYGLRKIGGFCHLYIGQEAVAVGSIAAIDLSKDYVVTAYRDHGHA 83 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LACG+D +MAEL G+ G S+GKGGSMHMF + F GG+GIVGAQ+ +GTG+AFA K Sbjct: 84 LACGMDPKVVMAELFGKVTGCSRGKGGSMHMFDVEKHFLGGNGIVGAQIPVGTGVAFAQK 143 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y+ + + +V FGDGA +QG +E+ N+A +W L V+YV ENNQ+ MGT + SA + Sbjct: 144 YQGTGGVTLVYFGDGAIHQGAFHEALNMAKIWELPVVYVCENNQWGMGTFWKKVSAVADL 203 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPAN 294 K G +++IPG+QVDGMD+RAV +AV+ RA +G P++IE TYRY+GHSMSDPA Sbjct: 204 YKLGAAYDIPGVQVDGMDVRAVYEATGEAVS--RAREGQPVLIEARTYRYKGHSMSDPAK 261 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRTREE+ E + DPI +++ + E + + +++ + +V FA+ +EP Sbjct: 262 YRTREELEEYK-RQDPIGRLKTFMEEEGLLDEETFRSLYDEIQREVEEAVAFAEQSEEPA 320 Query: 355 PAELYSDI 362 +Y D+ Sbjct: 321 LHTMYEDV 328 >gi|156044875|ref|XP_001588993.1| hypothetical protein SS1G_09626 [Sclerotinia sclerotiorum 1980] gi|154694021|gb|EDN93759.1| hypothetical protein SS1G_09626 [Sclerotinia sclerotiorum 1980 UF-70] Length = 409 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 165/347 (47%), Positives = 220/347 (63%), Gaps = 21/347 (6%) Query: 35 DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 D PF E FE E + K++ Y M+ +RR E A +LY + G Sbjct: 48 DKPFTLQLSDESFETYELDPPSYTMETTKKELKQMYIDMVSMRRMEMAADRLYKEKKIRG 107 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEAV VG++ SLT+ D +ITAYR HG L G I+ EL GR+ GI+ GK Sbjct: 108 FCHLSTGQEAVAVGIEHSLTKEDDIITAYRCHGFALMRGASVKSIIGELLGRREGIAYGK 167 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMF+ GFYGG+GIVGAQV +G G+AFA+KY + + V +GDGA+NQGQV+E+ Sbjct: 168 GGSMHMFT--KGFYGGNGIVGAQVPVGAGLAFAHKYNGNKNVSVALYGDGASNQGQVFEA 225 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A LWNL V++ ENN+Y MGT+ +R+SA T++ KRG IPG++V+GMD AVKA Sbjct: 226 FNMAKLWNLPVLFGCENNKYGMGTAANRSSALTDYYKRGQY--IPGLKVNGMDALAVKAA 283 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 + A Y A GP+++E +TYRY GHSMSDP YRTREEI MRS DPI ++++L+ Sbjct: 284 VKHAKEYANAGNGPLVLEYVTYRYGGHSMSDPGTTYRTREEIQRMRSTQDPIAGLKQKLI 343 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--PAELYSDILI 364 +E +LK I+ R ++ V+ A+ PD P LY DI + Sbjct: 344 EWNVTTEDELKTIDKEARAKVDAEVKEAEEMPFPDATPQILYEDIYV 390 >gi|195626472|gb|ACG35066.1| pyruvate dehydrogenase E1 component alpha subunit [Zea mays] Length = 390 Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 152/311 (48%), Positives = 208/311 (66%), Gaps = 10/311 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M L+RR E A LY ++ GFCHL GQEAV VGM+ ++T D +ITAYR+H Sbjct: 64 FRDMSLMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDHCTY 123 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D +EL GR+GG S+GKGGSMH + FYGGHGIVGAQV LG G+AFA K Sbjct: 124 LARGGDLVSAFSELMGREGGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQK 183 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y++ + +GD AANQGQ++E+ NI+ALW L I V ENN Y MGT+ RA+ + Sbjct: 184 YKKEETATFALYGDCAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPAY 243 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP 292 KRG +PG++VDGMD+ AVK +A + + H GPI++EM TYRY GHSMSDP Sbjct: 244 YKRGD--YVPGLKVDGMDVLAVK----QACKFAKDHAVANGPIVLEMDTYRYHGHSMSDP 297 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YRTR+EI+ +R DPIE+VRK LL + A+ +LK++E +RK +++++ A+ Sbjct: 298 GSTYRTRDEISGVRQERDPIERVRKLLLAHDLATAAELKDMEKEIRKQVDDAIAKAKESS 357 Query: 352 EPDPAELYSDI 362 PD +EL++++ Sbjct: 358 MPDTSELFTNV 368 >gi|330924866|ref|XP_003300813.1| hypothetical protein PTT_12165 [Pyrenophora teres f. teres 0-1] gi|311324874|gb|EFQ91099.1| hypothetical protein PTT_12165 [Pyrenophora teres f. teres 0-1] Length = 426 Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 165/362 (45%), Positives = 222/362 (61%), Gaps = 27/362 (7%) Query: 26 AATSSVDCVDIPFL-----------EGFEVSEFN---------KEQELSAYRLMLLIRRF 65 AA+S D ++P E FE E + K++ Y M+ +RR Sbjct: 34 AASSHTDPANVPAEDDKPFEIRLSDESFETYELDPPPYTMQVTKKELKKMYYDMVAVRRM 93 Query: 66 EEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKI 125 E A +LY + GFCHL GQEAV VG++ ++ D +ITAYR HG L G I Sbjct: 94 EMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAIERADHLITAYRCHGFALMRGATVKSI 153 Query: 126 MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVV 185 + EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV +G GIAFA +Y + + Sbjct: 154 IGELLGRREGIAYGKGGSMHMFAP--GFYGGNGIVGAQVPVGAGIAFACQYENKKNVTLA 211 Query: 186 CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIP 245 +GDGA+NQGQV+E+FN+A LWNL VI+ ENN+Y MGT+ +R+SA T++ KRG IP Sbjct: 212 LYGDGASNQGQVFEAFNMAKLWNLPVIFGCENNKYGMGTAANRSSALTDYYKRGQY--IP 269 Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEM 304 G++++GMD+ AVKA + YC A KGP++ E +TYRY GHSMSDP YRTREEI M Sbjct: 270 GLKINGMDVLAVKAAVKYGKEYCAADKGPLVYEYVTYRYGGHSMSDPGTTYRTREEIQRM 329 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE--LYSDI 362 RS +DPI ++++LL SE +LK I+ R ++ V A+ P+P LY DI Sbjct: 330 RSTNDPIAGLKQKLLDWGVTSEEELKSIDKQARSEVDAEVAEAEKMAPPEPTGKVLYEDI 389 Query: 363 LI 364 + Sbjct: 390 YV 391 >gi|24639744|ref|NP_726946.1| lethal (1) G0334, isoform D [Drosophila melanogaster] gi|28571106|ref|NP_572181.4| lethal (1) G0334, isoform A [Drosophila melanogaster] gi|7290524|gb|AAF45976.1| lethal (1) G0334, isoform A [Drosophila melanogaster] gi|22831701|gb|AAN09129.1| lethal (1) G0334, isoform D [Drosophila melanogaster] gi|317008641|gb|ADU79248.1| GM13002p [Drosophila melanogaster] Length = 399 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 153/318 (48%), Positives = 211/318 (66%), Gaps = 6/318 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K+Q L Y M IRR E AG LY ++ GFCHL GQEA VGMK ++ + D + Sbjct: 59 KLTKDQALKYYTQMQTIRRLETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNI 118 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 I+AYR HG GV S ++AELTG QGG ++GKGGSMHM++ FYGG+GIVGAQV Sbjct: 119 ISAYRVHGWTYLMGVSPSGVLAELTGVQGGCARGKGGSMHMYAPN--FYGGNGIVGAQVP 176 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+ A KY+ + +C+ +GDGAANQGQV+E++N+A LW L VI+V ENN Y MGTS Sbjct: 177 LGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEAYNMAYLWKLPVIFVCENNNYGMGTS 236 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RAS T++ RG + +PG+ VDGMD+ AV++ + A+ Y H GP+++E TYRY Sbjct: 237 SERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSATEFAINYVNTH-GPLVMETNTYRYS 293 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP +YRTREEI E+R DPI ++ + + ++K I++ VRK ++ + Sbjct: 294 GHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCIELGLITTDEVKAIDLKVRKEVDEAT 353 Query: 345 EFAQSDKEPDPAELYSDI 362 FA+SD E + L++D+ Sbjct: 354 AFAKSDAELGVSHLWTDV 371 >gi|302903157|ref|XP_003048797.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256729731|gb|EEU43084.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 409 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 167/372 (44%), Positives = 231/372 (62%), Gaps = 14/372 (3%) Query: 2 YVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSA 55 Y+A + VT +L+ SV V+ D F E +E+ E K++ Sbjct: 23 YIAARSVTTNAASASLSHSVPQSDDEPFVVNLSDESF-ETYELDPPPYSLEVTKKELKQM 81 Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M+ IR+ E A +LY + GFCHL GQEAV VG++ ++T+ D +ITAYR HG Sbjct: 82 YYDMVSIRQMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAITKADDIITAYRCHGFA 141 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G I+ EL GR+ GIS GKGGSMHMF GFYGG+GIVGAQV +G G+AFA+K Sbjct: 142 LMRGATVKSIIGELLGRREGISYGKGGSMHMFY--KGFYGGNGIVGAQVPVGAGLAFAHK 199 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y + ++ +GDGA+NQGQV+E+FN+A LWNL ++ ENN+Y MGTS +R+SA T++ Sbjct: 200 YNGNKNASIILYGDGASNQGQVFEAFNMAKLWNLPALFGCENNKYGMGTSAARSSALTDY 259 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-AN 294 KRG IPG++V+GMD+ AVKA + + A KGP+++E +TYRY GHSMSDP Sbjct: 260 YKRGQY--IPGLKVNGMDVLAVKAAVKYGKEWTAADKGPMVLEYVTYRYGGHSMSDPGTT 317 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRTREEI MRS +D I +++++L + +E +LK+I+ R +N V A+ PD Sbjct: 318 YRTREEIQRMRSTNDAIAGLKQKILDWEVTTEDELKKIDKEARAHVNEEVAIAEGMAVPD 377 Query: 355 PAE--LYSDILI 364 P LY D + Sbjct: 378 PKPEILYEDTYV 389 >gi|322709387|gb|EFZ00963.1| pyruvate dehydrogenase E1 component alpha subunit [Metarhizium anisopliae ARSEF 23] Length = 409 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 167/369 (45%), Positives = 232/369 (62%), Gaps = 14/369 (3%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAY 56 + + VT +L+ SV V D F E +E+ E K++ Y Sbjct: 25 LVSRSVTTDAASASLHNSVPQSEDEPFQVALSDESF-ETYELDPPSYTIEVTKKELKQMY 83 Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 M+ IR+ E A +LY + GFCHL GQEAV VG++ ++T+ D +ITAYR HG L Sbjct: 84 YDMVTIRQMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAITKLDDVITAYRCHGFAL 143 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G I+ EL GR+ GI+ GKGGSMHMFS GFYGG+GIVGAQV +G G+AFA+KY Sbjct: 144 MRGGTVRSIIGELLGRREGIAYGKGGSMHMFS--KGFYGGNGIVGAQVPVGAGLAFAHKY 201 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 S ++ +GDGA+NQGQV+E+FN+A LWNL ++ ENN+Y MGTS +R+SA T++ Sbjct: 202 NDSKTASIILYGDGASNQGQVFEAFNMAKLWNLPALFGCENNKYGMGTSAARSSALTDYY 261 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANY 295 KRG IPG++V+GMD+ AVKA + + A KGP+++E +TYRY GHSMSDP Y Sbjct: 262 KRGQ--YIPGLKVNGMDVLAVKAAVTYGKEWTAADKGPMVLEYVTYRYGGHSMSDPGTTY 319 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ--SDKEP 353 RTREEI MRS +DPI +++++L + +E +LK+I+ R +N V A+ + EP Sbjct: 320 RTREEIQRMRSTNDPIAGLKQKILDWEVTTEDELKKIDKEARSHVNEEVAIAEAMAVPEP 379 Query: 354 DPAELYSDI 362 P+ L+ DI Sbjct: 380 KPSILFEDI 388 >gi|195340763|ref|XP_002036982.1| GM12361 [Drosophila sechellia] gi|194131098|gb|EDW53141.1| GM12361 [Drosophila sechellia] Length = 441 Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 153/318 (48%), Positives = 211/318 (66%), Gaps = 6/318 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K+Q L Y M IRR E AG LY ++ GFCHL GQEA VGMK ++ + D + Sbjct: 101 KLTKDQALKYYTQMQTIRRLETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNI 160 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 I+AYR HG GV S ++AELTG QGG ++GKGGSMHM++ FYGG+GIVGAQV Sbjct: 161 ISAYRVHGWTYLMGVSPSGVLAELTGVQGGCARGKGGSMHMYAPN--FYGGNGIVGAQVP 218 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+ A KY+ + +C+ +GDGAANQGQV+E++N+A LW L VI+V ENN Y MGTS Sbjct: 219 LGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEAYNMAYLWKLPVIFVCENNNYGMGTS 278 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RAS T++ RG + +PG+ VDGMD+ AV++ + A+ Y H GP+++E TYRY Sbjct: 279 SERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSATEFAINYVNTH-GPLVMETNTYRYS 335 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP +YRTREEI E+R DPI ++ + + ++K I++ VRK ++ + Sbjct: 336 GHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCIELGLITTDEVKAIDLKVRKEVDEAT 395 Query: 345 EFAQSDKEPDPAELYSDI 362 FA+SD E + L++D+ Sbjct: 396 AFAKSDAELGVSHLWTDV 413 >gi|158297889|ref|XP_001689086.1| AGAP004773-PA [Anopheles gambiae str. PEST] gi|157014544|gb|EDO63503.1| AGAP004773-PA [Anopheles gambiae str. PEST] Length = 377 Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 159/317 (50%), Positives = 208/317 (65%), Gaps = 5/317 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KE L Y M IRR E AG LY ++ GFCHL GQEA VGM+ ++ D I Sbjct: 35 LTKEDALKYYGQMYTIRRMETAAGNLYKEKVIRGFCHLYSGQEACAVGMRAAMRPEDSCI 94 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG GV ++AELTGR G ++GKGGSMHM+ KN FYGG+GIVGAQV L Sbjct: 95 TAYRCHGWTYLMGVSPVGVLAELTGRSSGCARGKGGSMHMYG-KN-FYGGNGIVGAQVPL 152 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GI FA KY + C+ +GDGAANQGQ++E +N+A LWN I+V ENN Y MGTS Sbjct: 153 GVGIGFAAKYNGTQGACIALYGDGAANQGQLFEVYNMAKLWNAPCIFVCENNGYGMGTSA 212 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA TN+ RG F +PG+ VDGMD+ AV+ A+ + + KGPI++E TYRY G Sbjct: 213 ERASANTNYYTRG-DF-VPGIWVDGMDVLAVREATRFALEHTSSGKGPILMETATYRYSG 270 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YR+R+EI E+R DPI +R+++L + A+ +LKEIE +R ++++ + Sbjct: 271 HSMSDPGTSYRSRDEIAEVRQTRDPITSLREKILTTELATVEELKEIEGKIRAEVDSATK 330 Query: 346 FAQSDKEPDPAELYSDI 362 A++DKE EL +DI Sbjct: 331 VAKTDKEISVDELTADI 347 >gi|189209542|ref|XP_001941103.1| pyruvate dehydrogenase E1 component subunit alpha [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977196|gb|EDU43822.1| pyruvate dehydrogenase E1 component subunit alpha [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 426 Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 165/362 (45%), Positives = 222/362 (61%), Gaps = 27/362 (7%) Query: 26 AATSSVDCVDIPFL-----------EGFEVSEFN---------KEQELSAYRLMLLIRRF 65 AA+S D ++P E FE E + K++ Y M+ +RR Sbjct: 34 AASSHTDPANVPAEDDKPFEIRLSDESFETYELDPPPYTMQVTKKELKKMYYDMVAVRRM 93 Query: 66 EEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKI 125 E A +LY + GFCHL GQEAV VG++ ++ D +ITAYR HG L G I Sbjct: 94 EMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAIERADHLITAYRCHGFALMRGATVKSI 153 Query: 126 MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVV 185 + EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV +G GIAFA +Y + + Sbjct: 154 IGELLGRREGIAYGKGGSMHMFAP--GFYGGNGIVGAQVPVGAGIAFACQYENKKNVTLA 211 Query: 186 CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIP 245 +GDGA+NQGQV+E+FN+A LWNL VI+ ENN+Y MGT+ +R+SA T++ KRG IP Sbjct: 212 LYGDGASNQGQVFEAFNMAKLWNLPVIFGCENNKYGMGTAANRSSALTDYYKRGQY--IP 269 Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEM 304 G++++GMD+ AVKA + YC A KGP++ E +TYRY GHSMSDP YRTREEI M Sbjct: 270 GLKINGMDVLAVKAAVKYGKEYCAADKGPLVYEYVTYRYGGHSMSDPGTTYRTREEIQRM 329 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE--LYSDI 362 RS +DPI ++++LL SE +LK I+ R ++ V A+ P+P LY DI Sbjct: 330 RSTNDPIAGLKQKLLDWGVTSEEELKSIDKQARSEVDAEVAEAEKMAAPEPTGKVLYEDI 389 Query: 363 LI 364 + Sbjct: 390 YV 391 >gi|24639740|ref|NP_726945.1| lethal (1) G0334, isoform C [Drosophila melanogaster] gi|7290525|gb|AAF45977.1| lethal (1) G0334, isoform C [Drosophila melanogaster] gi|323301254|gb|ADX35969.1| RH59152p [Drosophila melanogaster] Length = 443 Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 153/318 (48%), Positives = 211/318 (66%), Gaps = 6/318 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K+Q L Y M IRR E AG LY ++ GFCHL GQEA VGMK ++ + D + Sbjct: 103 KLTKDQALKYYTQMQTIRRLETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNI 162 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 I+AYR HG GV S ++AELTG QGG ++GKGGSMHM++ FYGG+GIVGAQV Sbjct: 163 ISAYRVHGWTYLMGVSPSGVLAELTGVQGGCARGKGGSMHMYAPN--FYGGNGIVGAQVP 220 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+ A KY+ + +C+ +GDGAANQGQV+E++N+A LW L VI+V ENN Y MGTS Sbjct: 221 LGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEAYNMAYLWKLPVIFVCENNNYGMGTS 280 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RAS T++ RG + +PG+ VDGMD+ AV++ + A+ Y H GP+++E TYRY Sbjct: 281 SERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSATEFAINYVNTH-GPLVMETNTYRYS 337 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP +YRTREEI E+R DPI ++ + + ++K I++ VRK ++ + Sbjct: 338 GHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCIELGLITTDEVKAIDLKVRKEVDEAT 397 Query: 345 EFAQSDKEPDPAELYSDI 362 FA+SD E + L++D+ Sbjct: 398 AFAKSDAELGVSHLWTDV 415 >gi|195477042|ref|XP_002100072.1| GE16361 [Drosophila yakuba] gi|194187596|gb|EDX01180.1| GE16361 [Drosophila yakuba] Length = 438 Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 153/318 (48%), Positives = 211/318 (66%), Gaps = 6/318 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K+Q L Y M IRR E AG LY ++ GFCHL GQEA VGMK ++ + D + Sbjct: 98 KLTKDQALKYYTQMQTIRRLETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNI 157 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 I+AYR HG GV S ++AELTG QGG ++GKGGSMHM++ FYGG+GIVGAQV Sbjct: 158 ISAYRVHGWTYLMGVSPSGVLAELTGVQGGCARGKGGSMHMYAPN--FYGGNGIVGAQVP 215 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+ A KY+ + +C+ +GDGAANQGQV+E++N+A LW L VI+V ENN Y MGTS Sbjct: 216 LGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEAYNMAYLWKLPVIFVCENNNYGMGTS 275 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RAS T++ RG + +PG+ VDGMD+ AV++ + A+ Y H GP+++E TYRY Sbjct: 276 SERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSATEFAINYVNTH-GPLVMETNTYRYS 332 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP +YRTREEI E+R DPI ++ + + ++K I++ VRK ++ + Sbjct: 333 GHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCIELGLITTDEVKAIDLKVRKEVDEAT 392 Query: 345 EFAQSDKEPDPAELYSDI 362 FA+SD E + L++D+ Sbjct: 393 AFAKSDAELGVSHLWTDV 410 >gi|194888391|ref|XP_001976909.1| GG18722 [Drosophila erecta] gi|190648558|gb|EDV45836.1| GG18722 [Drosophila erecta] Length = 440 Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 153/318 (48%), Positives = 211/318 (66%), Gaps = 6/318 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K+Q L Y M IRR E AG LY ++ GFCHL GQEA VGMK ++ + D + Sbjct: 100 KLTKDQALKYYTQMQTIRRLETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNI 159 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 I+AYR HG GV S ++AELTG QGG ++GKGGSMHM++ FYGG+GIVGAQV Sbjct: 160 ISAYRVHGWTYLMGVSPSGVLAELTGVQGGCARGKGGSMHMYAPN--FYGGNGIVGAQVP 217 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+ A KY+ + +C+ +GDGAANQGQV+E++N+A LW L VI+V ENN Y MGTS Sbjct: 218 LGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEAYNMAYLWKLPVIFVCENNNYGMGTS 277 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RAS T++ RG + +PG+ VDGMD+ AV++ + A+ Y H GP+++E TYRY Sbjct: 278 SERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSATEFAINYVNTH-GPLVMETNTYRYS 334 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP +YRTREEI E+R DPI ++ + + ++K I++ VRK ++ + Sbjct: 335 GHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCIELGLITTDEVKAIDLKVRKEVDEAT 394 Query: 345 EFAQSDKEPDPAELYSDI 362 FA+SD E + L++D+ Sbjct: 395 AFAKSDAELGVSHLWTDV 412 >gi|291061974|gb|ADD73514.1| putative pyruvate dehydrogenase E1 component alpha subunit [Triticum aestivum] Length = 329 Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 153/310 (49%), Positives = 207/310 (66%), Gaps = 10/310 (3%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M L+RR E A LY ++ GFCHL GQEAV GM+ ++T D +ITAYR+H L+ Sbjct: 6 MSLMRRMEIAADSLYKAKLIRGFCHLYDGQEAVCAGMEAAITRKDSIITAYRDHCIFLSR 65 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G D AEL GRQ G S+GKGGSMH + FYGGHGIVGAQV LG G+AFA KYR+ Sbjct: 66 GGDLVTAFAELMGRQVGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQKYRK 125 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 D + +GDGAANQGQ++E+ NI+ALW L I V ENN Y MGT+ RA+ ++ KR Sbjct: 126 EDSVSFSLYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPSYYKR 185 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP-AN 294 G +PG++VDGMD+ AVK +A + + H GPI++EM TYRY GHSMSDP + Sbjct: 186 GD--YVPGLKVDGMDVLAVK----QACKFAKEHAIANGPIVLEMDTYRYHGHSMSDPGST 239 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRTR+EI+ +R DPIE+VRK LL + A+ +LK++E +RK ++ ++ A+ PD Sbjct: 240 YRTRDEISGVRQERDPIERVRKLLLAHDLATPAELKDMEKEIRKEVDAAIAKAKESPMPD 299 Query: 355 PAELYSDILI 364 +EL++++ + Sbjct: 300 ASELFTNVYV 309 >gi|91078982|ref|XP_974523.1| PREDICTED: similar to pyruvate dehydrogenase [Tribolium castaneum] gi|270003684|gb|EFA00132.1| hypothetical protein TcasGA2_TC002948 [Tribolium castaneum] Length = 397 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 157/319 (49%), Positives = 214/319 (67%), Gaps = 5/319 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + +++ L YR M +RR E AG LY ++ GFCHL GQEAV VG+K +L D Sbjct: 53 TTLSRDDALLYYRQMHTVRRMETSAGNLYKEKIIRGFCHLYSGQEAVAVGIKAALRPHDD 112 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR HG GV+ ++AELTGRQ G ++GKGGSMHM++ N FYGG+GIVGAQV Sbjct: 113 VITAYRAHGWSHLMGVNPLGVLAELTGRQSGCARGKGGSMHMYT--NHFYGGNGIVGAQV 170 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+A A KY+ +D +CV +GDGAANQGQV+E FN+A LW++ I+V ENN Y MGT Sbjct: 171 PLGVGLALAAKYKGTDGVCVALYGDGAANQGQVFEVFNMAKLWDIPCIFVCENNGYGMGT 230 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S +RA+A T + RG IPG+ +DGMD+ AV+ AV +C + KGPI++E TYRY Sbjct: 231 SAARAAANTAYYTRGDV--IPGIWIDGMDVLAVREAAKFAVDHCTSGKGPILLEAATYRY 288 Query: 285 RGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHSMSDP +YRTREEI E+R DPI +++++ S +LK I+ +R ++ + Sbjct: 289 SGHSMSDPGTSYRTREEIQEVRQTRDPITSFKEKIITANLVSPEELKAIDTEIRSTVDEA 348 Query: 344 VEFAQSDKEPDPAELYSDI 362 + A+++KE EL +DI Sbjct: 349 TKKAKAEKEIPLEELTADI 367 >gi|68138987|gb|AAY86036.1| pyruvate dehydrogenase [Citrus x paradisi] Length = 395 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 152/323 (47%), Positives = 214/323 (66%), Gaps = 10/323 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E ++ LS +R M +RR E A LY +V GFCHL GQEAV +GM+ +T+ D + Sbjct: 59 ETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSI 118 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H L G ++ +EL GR+ G S GKGGSMH + + YGGHGIVGAQ+ Sbjct: 119 ITAYRDHCTFLGRGGTLLEVFSELMGRKDGCSHGKGGSMHFYKKDSRLYGGHGIVGAQIP 178 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA KY + + + +GDGAANQGQ++E+ NIAALW+L I V ENN Y MGT+ Sbjct: 179 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTA 238 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTY 282 RA+ ++ KRG +PG++VDGMD AVK +A + + H GP+I+EM TY Sbjct: 239 EWRAAKSPSYYKRGD--YVPGLKVDGMDALAVK----QACKFAKEHALKNGPMILEMDTY 292 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI+ +R DPIE++RK +L + A+E +LK+IE VRK ++ Sbjct: 293 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVD 352 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 ++ A+ P+P+EL++++ + Sbjct: 353 EAIAKAKESPMPEPSELFTNVYV 375 >gi|46122153|ref|XP_385630.1| hypothetical protein FG05454.1 [Gibberella zeae PH-1] Length = 409 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 161/347 (46%), Positives = 225/347 (64%), Gaps = 12/347 (3%) Query: 2 YVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSA 55 Y A + VT +L+ SV SV+ D F E +E+ E K++ Sbjct: 23 YTAVRSVTTDAASASLSHSVPKADDEPFSVNLSDESF-ETYELDPPPYTLEVTKKELKDM 81 Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M++ R+ E A +LY + GFCHL GQEAV VG++ ++T+ D +ITAYR HG+ Sbjct: 82 YREMVVTRQMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAITKEDDIITAYRCHGYA 141 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G I+ EL GR+ GIS GKGGSMHMF+ GFYGG+GIVGAQV +G G+AFA+K Sbjct: 142 LLRGASVRSIIGELLGRREGISYGKGGSMHMFA--KGFYGGNGIVGAQVPVGAGLAFAHK 199 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y + ++ +GDGA+NQGQV+E+FN+A LWNL ++ ENN+Y MGT+ +R+SA T++ Sbjct: 200 YNNNKNASIILYGDGASNQGQVFEAFNMAKLWNLPALFGCENNKYGMGTAAARSSALTDY 259 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-AN 294 KRG IPG++V+GMD+ AVKA + Y A KGP+++E +TYRY GHSMSDP Sbjct: 260 YKRGQY--IPGLKVNGMDVLAVKAAVKYGKEYTAADKGPLVLEYVTYRYGGHSMSDPGTT 317 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRTREEI MRS +DPI +++++L + +E +LK+I+ R +N Sbjct: 318 YRTREEIQRMRSTNDPIAGLKQKILDWEITTEEELKKIDKEARAHVN 364 >gi|195447246|ref|XP_002071128.1| GK25306 [Drosophila willistoni] gi|194167213|gb|EDW82114.1| GK25306 [Drosophila willistoni] Length = 474 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 153/318 (48%), Positives = 211/318 (66%), Gaps = 6/318 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K++ L Y M IRR E AG LY ++ GFCHL GQEA VGMK ++ + D + Sbjct: 134 KLTKDEALKYYTQMQTIRRIETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNI 193 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 I+AYR HG GV + ++AELTG QGG ++GKGGSMHM+S FYGG+GIVGAQV Sbjct: 194 ISAYRVHGWTYLMGVSPNGVLAELTGVQGGCARGKGGSMHMYSPN--FYGGNGIVGAQVP 251 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+ A KY+ + +C+ +GDGAANQGQV+E++N+A LW L VI+V ENN Y MGTS Sbjct: 252 LGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEAYNMAYLWKLPVIFVCENNNYGMGTS 311 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RAS T++ RG + +PG+ VDGMD+ AV++ + A+ Y H GP+++E TYRY Sbjct: 312 SERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSATEFAINYVNTH-GPLVMETNTYRYS 368 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP +YRTREEI E+R DPI ++ + + ++K I++ VRK I+ + Sbjct: 369 GHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCIELGLITADEVKAIDLKVRKEIDEAT 428 Query: 345 EFAQSDKEPDPAELYSDI 362 FA+SD E + L++D+ Sbjct: 429 AFAKSDAELAVSHLWTDV 446 >gi|224100211|ref|XP_002311788.1| predicted protein [Populus trichocarpa] gi|222851608|gb|EEE89155.1| predicted protein [Populus trichocarpa] Length = 393 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 168/361 (46%), Positives = 234/361 (64%), Gaps = 19/361 (5%) Query: 17 LNPSVSAKRAATSSVDCVDI----PFL-----EGFEVSEFNKEQELSAYRLMLLIRRFEE 67 L + S +R ++S D + I PF E N ++ S +R+M +RR E Sbjct: 19 LATAFSLRRQISTSTDPITIETSVPFATHRCDPPSRTVETNPQELQSFFRVMATMRRMEI 78 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 A LY ++ GFCHL GQEAV VGM+ ++T+ D +ITAYR+H L G ++ + Sbjct: 79 AADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKNDSIITAYRDHCTFLGRGGTLLEVFS 138 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 EL GRQGG SKGKGGSMH + +GFYGGHGIVGAQV LG G+AFA+KY + D + + Sbjct: 139 ELMGRQGGCSKGKGGSMHFYKKDSGFYGGHGIVGAQVPLGCGLAFAHKYNKDDAVAFALY 198 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGAANQGQ++E+ NI+ALW+L +I V ENN Y MGT+ RA+ + KRG +PG+ Sbjct: 199 GDGAANQGQLFEALNISALWDLPIILVCENNHYGMGTAEWRAAKSPAYYKRGD--YVPGL 256 Query: 248 QVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP-ANYRTREEINE 303 +VDGMD AVK +A + + H GPII+EM TYRY GHSMSDP + YRTR+EI+ Sbjct: 257 KVDGMDAFAVK----QACKFAKEHALKSGPIILEMDTYRYHGHSMSDPGSTYRTRDEISG 312 Query: 304 MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +R DPIE++RK +L + A+E +LK+IE VRK ++ ++ A+ PDP+EL++++ Sbjct: 313 VRQERDPIERIRKLILTHDLATEKELKDIEKEVRKQVDEAIAQAKESPMPDPSELFTNVY 372 Query: 364 I 364 + Sbjct: 373 V 373 >gi|242772865|ref|XP_002478124.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit, putative [Talaromyces stipitatus ATCC 10500] gi|218721743|gb|EED21161.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit, putative [Talaromyces stipitatus ATCC 10500] Length = 409 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 160/330 (48%), Positives = 215/330 (65%), Gaps = 20/330 (6%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +K++ Y+ M IRR E + QLY + GFCHL GQEAV VG++ ++T+ D + Sbjct: 68 ETSKKELRQLYKDMATIRRLELLSDQLYKEQKIRGFCHLSTGQEAVAVGIEHAITKSDPL 127 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG G I+ EL G+Q GIS GKGGSMHMF+ GFYGG+GIVGA V Sbjct: 128 ITAYRSHGFTYMRGGSIRSIIGELLGKQQGISYGKGGSMHMFT--KGFYGGNGIVGAHVP 185 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +GTGI+FA +Y + V +GDGAANQGQV+E+FN+A LWNL V+Y ENNQY MGTS Sbjct: 186 VGTGISFAQQYSEQSNMTVDLYGDGAANQGQVHEAFNMAKLWNLPVLYGCENNQYGMGTS 245 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA--------HKGPIII 277 RASA+TN+ KRG F PG++V+GMD+ A+ + AV Y R H+GPI+ Sbjct: 246 AERASAETNYYKRG--FYFPGIRVNGMDVLAIMS----AVKYARRLITGEEGNHEGPILY 299 Query: 278 EMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E +TYR+ GHSMSDP YR+REE+ + R DP+ +++R+L K +E +LK +E + Sbjct: 300 EFVTYRFAGHSMSDPGIAYRSREELKDAR-KQDPLTVLKQRMLELKINTEDELKAMEKGI 358 Query: 337 RKIINNSVEFAQSDKEPDPAE--LYSDILI 364 + +N+ E AQ +P PAE L+ DI + Sbjct: 359 KSFVNSEAEIAQKMDDPSPAEDTLFQDIFV 388 >gi|226480710|emb|CAX73452.1| pyruvate dehydrogenase E1 alpha 1 [Schistosoma japonicum] Length = 392 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 156/319 (48%), Positives = 204/319 (63%), Gaps = 5/319 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E ++ L + IRR E G LY + GFC L GQEAV VG++ +L GD Sbjct: 52 TECTRDDALKYLETLHCIRRMETALGNLYKEKHIRGFCRLYSGQEAVAVGIEAALQPGDT 111 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR HG + GV I+AEL G++ G +KG GGSMH+++ FYGG+GIVGAQV Sbjct: 112 IITAYRCHGFTMTRGVPVHDIVAELAGKKTGCTKGVGGSMHLYA--KDFYGGNGIVGAQV 169 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG GIA KYR + V +GDGAANQGQV+E+FN+A LWNL VI++ ENN+Y MGT Sbjct: 170 PLGVGIALRMKYRGEKSVSVTLYGDGAANQGQVFEAFNMAKLWNLPVIFICENNKYGMGT 229 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV RASA TN+ RG IPG+ VDGMD+ V+ A +CR+ KGPI++E TYRY Sbjct: 230 SVDRASANTNYYTRGDY--IPGLWVDGMDVLTVREATRFAADWCRSDKGPILLETETYRY 287 Query: 285 RGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHSMSDP +YRTREE+ MR DPI +K ++ N ++ + KEIE VR ++ Sbjct: 288 HGHSMSDPGTSYRTREEVQSMRRGRDPIALFQKSIIDNGLCTQDEAKEIEKRVRTEVDKD 347 Query: 344 VEFAQSDKEPDPAELYSDI 362 VE A +D EP ++ +I Sbjct: 348 VEKALNDSEPPLETMFGNI 366 >gi|33357459|pdb|1NI4|A Chain A, Human Pyruvate Dehydrogenase gi|33357461|pdb|1NI4|C Chain C, Human Pyruvate Dehydrogenase Length = 365 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 165/313 (52%), Positives = 215/313 (68%), Gaps = 5/313 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E L YR +RR E KA QLY ++ GFCHLC GQEA VG++ + D +I Sbjct: 31 LTREDGLKYYRXXQTVRRXELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 90 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG G+ +I+AELTGR+GG +KGKGGS H ++ KN FYGG+GIVGAQV L Sbjct: 91 TAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSXHXYA-KN-FYGGNGIVGAQVPL 148 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIA A KY D++C+ +GDGAANQGQ++E++N AALW L I++ ENN+Y GTSV Sbjct: 149 GAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNXAALWKLPCIFICENNRYGXGTSV 208 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T++ KRG F IPG++VDG DI V+ A AYCR+ KGPI+ E+ TYRY G Sbjct: 209 ERAAASTDYYKRG-DF-IPGLRVDGXDILCVREATRFAAAYCRSGKGPILXELQTYRYHG 266 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HS SDP +YRTREEI E+RS DPI ++ R +++ AS +LKEI++ VRK I ++ + Sbjct: 267 HSXSDPGVSYRTREEIQEVRSKSDPIXLLKDRXVNSNLASVEELKEIDVEVRKEIEDAAQ 326 Query: 346 FAQSDKEPDPAEL 358 FA +D EP EL Sbjct: 327 FATADPEPPLEEL 339 >gi|168017393|ref|XP_001761232.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687572|gb|EDQ73954.1| predicted protein [Physcomitrella patens subsp. patens] Length = 391 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 164/358 (45%), Positives = 224/358 (62%), Gaps = 14/358 (3%) Query: 16 ALNPSVSAKRAATSSVD---CVDIPF------LEGFEVSEFNKEQELSAY-RLMLLIRRF 65 AL P+ A S+ +DIP +E V+ QEL+ + + M ++RR Sbjct: 15 ALAPAARVMSQALSTASEPITLDIPVPFKAHKVETPSVTVETSAQELTNFFKTMFIMRRM 74 Query: 66 EEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKI 125 E A LY + GFCHL GQEAV VGM+ +L + D +ITAYR+H L G ++ Sbjct: 75 EIAADSLYKSKFIRGFCHLYDGQEAVCVGMEAALNDKDCIITAYRDHCTHLGRGGSVLEV 134 Query: 126 MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVV 185 AEL GR+ G S GKGGSMHM++ K GFYGG+GIVGAQ LG G+AFA KY + + + + Sbjct: 135 FAELMGRKDGCSLGKGGSMHMYNKKGGFYGGNGIVGAQTPLGAGLAFAQKYLKVEGVTLA 194 Query: 186 CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIP 245 +GDGAANQGQ++E+ NI+ALWNL VIYV ENN Y MGT+ R++ + KRG IP Sbjct: 195 MYGDGAANQGQLFEAMNISALWNLPVIYVCENNHYGMGTAEWRSAKSPEYYKRGDY--IP 252 Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEM 304 G++VDGMD AVK + A Y GP+++EM TYRY GHSMSDP + YRTR+EI+ + Sbjct: 253 GLKVDGMDCLAVKQAVKYAKEYA-LQNGPMVLEMDTYRYHGHSMSDPGSTYRTRDEISGV 311 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 R DPIE++RK LL N A+ +LK +E +K + +++ A+ PD EL++ + Sbjct: 312 RQERDPIERIRKLLLSNNIATVAELKTMEKEAKKEVEDALSKAKESPSPDSDELFTHV 369 >gi|170030275|ref|XP_001843015.1| pyruvate dehydrogenase E1 component subunit alpha [Culex quinquefasciatus] gi|167866451|gb|EDS29834.1| pyruvate dehydrogenase E1 component subunit alpha [Culex quinquefasciatus] Length = 380 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 147/317 (46%), Positives = 216/317 (68%), Gaps = 6/317 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 N+++ + Y+ M IRR E AG LY +V GFCHL GQEA VGMK ++ D +I Sbjct: 40 INRDEAVEYYKQMQTIRRLETSAGNLYKEKIVRGFCHLYSGQEACAVGMKAAMRPQDNII 99 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +AYR HG GV ++AELTGRQ G ++GKGGSMHM++ FYGG+GIVGAQV L Sbjct: 100 SAYRVHGWTYLMGVSPKGVLAELTGRQSGCARGKGGSMHMYAPN--FYGGNGIVGAQVPL 157 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+A A +Y+ ++ +C+ +GDGA+NQGQV+E++N+A LW L I+V ENN Y MGTS Sbjct: 158 GAGVALACQYKGNNGVCLALYGDGASNQGQVFEAYNMAHLWKLPCIFVCENNGYGMGTSA 217 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+S+ TN+ +RG +PG+ VDGMD+ AVK D A+ Y + GP+++E+ TYRY G Sbjct: 218 DRSSSNTNYFQRGDV--LPGIWVDGMDVVAVKLATDFAIDYVLKN-GPLVMEVFTYRYSG 274 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTR+E+ E+R DPI ++++L A+ ++K+I+ +++K ++ + + Sbjct: 275 HSMSDPGTSYRTRDEVQEVRQTRDPITSYKEKILTAGLATIDEIKKIDADIKKEVDEATK 334 Query: 346 FAQSDKEPDPAELYSDI 362 +A++D E EL +D+ Sbjct: 335 WAKADAEIGLPELTTDV 351 >gi|221129918|ref|XP_002162893.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 405 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 154/320 (48%), Positives = 218/320 (68%), Gaps = 8/320 (2%) Query: 39 LEGFEVSE---FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 L+G E+ ++Q + YR M +IRR E++A +LY + GFCHL GQEA VG+ Sbjct: 55 LDGHEIPSSGLVTRDQAMDYYRKMAVIRRMEQEASKLYKEKFIRGFCHLYSGQEATCVGI 114 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 L D +ITAYR HG G +++++ELTGR+ G ++GKGGSMHM++ + FYG Sbjct: 115 NDQLDNDDSVITAYRAHGWTYIKGRTVAQVLSELTGRKTGCTEGKGGSMHMYAHE--FYG 172 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G+GIVGAQV LG GIA A++YR + CV +GDGAANQGQV+E+FN+AALW+L I+V+ Sbjct: 173 GNGIVGAQVPLGAGIALAHQYRNNGHCCVTLYGDGAANQGQVFEAFNMAALWHLPCIFVV 232 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENN Y MGTS SR+S + RG IPG+QVDG + +V+ AV + ++ KGPI Sbjct: 233 ENNGYGMGTSSSRSSFVNEYYTRGDY--IPGIQVDGNCVVSVREAAKFAVHWTKSGKGPI 290 Query: 276 IIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 ++E TYRY GHSMSDP +YRTR+E+ EMR DPI ++++L++K +E + K I+ Sbjct: 291 LLECNTYRYFGHSMSDPGTSYRTRDEVQEMRLKRDPIASFKEKILNSKLLNEDNFKAIDK 350 Query: 335 NVRKIINNSVEFAQSDKEPD 354 +V++ ++ +VE A+SD EPD Sbjct: 351 SVKEEVDLAVESARSDPEPD 370 >gi|194769047|ref|XP_001966619.1| GF22274 [Drosophila ananassae] gi|190617383|gb|EDV32907.1| GF22274 [Drosophila ananassae] Length = 399 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 160/343 (46%), Positives = 221/343 (64%), Gaps = 12/343 (3%) Query: 27 ATSSVDCVDIPF----LEGFEVSE--FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF LE +E K++ L Y M IRR E AG LY ++ G Sbjct: 34 ATEATIQVNRPFKLHRLEEGPATEVKLTKDEALKYYTQMQTIRRLETAAGNLYKEKIIRG 93 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV + ++AELTG QGG ++GK Sbjct: 94 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPAGVLAELTGVQGGCARGK 153 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+S FYGG+GIVGAQV LGTG+ A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 154 GGSMHMYSPN--FYGGNGIVGAQVPLGTGVGLACKYKGNGGMCLALYGDGAANQGQVFEA 211 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 212 YNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 269 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y GP+++E TYRY GHSMSDP +YRTREEI E+R DPI ++ + Sbjct: 270 TEFAINYVNT-VGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 328 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + ++K I++ VRK ++ + FA+SD E + L++D+ Sbjct: 329 ELGLITADEVKAIDLKVRKEVDEATAFAKSDAELGVSHLWTDV 371 >gi|154287036|ref|XP_001544313.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Ajellomyces capsulatus NAm1] gi|150407954|gb|EDN03495.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Ajellomyces capsulatus NAm1] Length = 405 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 164/347 (47%), Positives = 222/347 (63%), Gaps = 21/347 (6%) Query: 35 DIPFL-----EGFEVSEFNK--------EQELSA-YRLMLLIRRFEEKAGQLYGMGMVGG 80 D PF E FE E + +QEL YR M+ IRR E A +LY + G Sbjct: 44 DKPFTVKLSDESFETYELDPPPYTLETTKQELKQMYRDMVSIRRMEMAADRLYKEKKIRG 103 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEAV G++ ++T+ D++ITAYR HG L G I+ EL GR+ GI+ GK Sbjct: 104 FCHLSTGQEAVATGIEHAITKDDKLITAYRCHGFALLRGGTVKSIIGELLGRREGIAYGK 163 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMF+ KN FYGG+GIVGAQV +G G+AF+ +Y + +GDGA+NQGQV+E+ Sbjct: 164 GGSMHMFA-KN-FYGGNGIVGAQVPVGAGLAFSQQYNDEKTTTIALYGDGASNQGQVFEA 221 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A LWNL I+ ENN+Y MGT+ SRA+A T++ KRG IPG++++GMD+ A+KA Sbjct: 222 FNMAKLWNLPCIFGCENNKYGMGTAASRAAALTDYYKRGQY--IPGLKINGMDVLAIKAA 279 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 + Y + KGP++ E +TYRY GHSMSDP YRTREEI MRS +DPI ++++LL Sbjct: 280 VQYGREYTTSGKGPLVFEYVTYRYGGHSMSDPGTTYRTREEIQRMRSTNDPIAGLKQKLL 339 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--PAELYSDILI 364 SE +LK I+ + RK +++ V A+ EPD P L+ D + Sbjct: 340 DWGVTSEEELKAIDKDARKYVDDEVAEAELMTEPDATPRILFEDTYV 386 >gi|326506962|dbj|BAJ95558.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326528715|dbj|BAJ97379.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 392 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 156/315 (49%), Positives = 207/315 (65%), Gaps = 10/315 (3%) Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 +A+R M L+RR E A LY ++ GFCHL GQEAV VGM+ ++T D +ITAYR+H Sbjct: 64 AAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRRDAIITAYRDHC 123 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 LA G D AEL GR G S+GKGGSMH + FYGGHGIVGAQV LG G+AFA Sbjct: 124 LYLARGGDLVAAFAELMGRVDGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFA 183 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 +YR+ + +GDGAANQGQ++E+ N+AALW L VI V ENN Y MGT+ +AS Sbjct: 184 QRYRKEGTVTFDLYGDGAANQGQLFEALNMAALWKLPVILVCENNHYGMGTAEWKASKSP 243 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMS 290 + KRG +PG++VDGMD AVK +A + + H GPII+EM TYRY GHSMS Sbjct: 244 AYYKRGD--YVPGLKVDGMDFLAVK----QACKFAKEHVLENGPIILEMDTYRYHGHSMS 297 Query: 291 DP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 DP + YRTR+EI +R DPIE+VRK LL + A+ +LK++E +RK ++ ++ A+ Sbjct: 298 DPGSTYRTRDEIAGIRQERDPIERVRKLLLTHDLATAQELKDMEKEIRKEVDTAIAKAKE 357 Query: 350 DKEPDPAELYSDILI 364 PD +EL+ ++ + Sbjct: 358 SPMPDTSELFKNVYV 372 >gi|325094767|gb|EGC48077.1| pyruvate dehydrogenase E1 component alpha subunit [Ajellomyces capsulatus H88] Length = 405 Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 164/347 (47%), Positives = 222/347 (63%), Gaps = 21/347 (6%) Query: 35 DIPFL-----EGFEVSEFNK--------EQELSA-YRLMLLIRRFEEKAGQLYGMGMVGG 80 D PF E FE E + +QEL YR M+ IRR E A +LY + G Sbjct: 44 DKPFTVKLSDESFETYELDPPPYTLETTKQELKQMYRDMVSIRRMEMAADRLYKEKKIRG 103 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEAV G++ ++T+ D++ITAYR HG L G I+ EL GR+ GI+ GK Sbjct: 104 FCHLSTGQEAVATGIEHAITKDDKLITAYRCHGFALLRGGTVKSIIGELLGRREGIAYGK 163 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMF+ KN FYGG+GIVGAQV +G G+AFA +Y + +GDGA+NQGQV+E+ Sbjct: 164 GGSMHMFA-KN-FYGGNGIVGAQVPVGAGLAFAQQYNDEKTTTIALYGDGASNQGQVFEA 221 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A LWNL I+ ENN+Y MGT+ +RA+A T++ KRG IPG++++GMD+ A+KA Sbjct: 222 FNMAKLWNLPCIFGCENNKYGMGTAANRAAALTDYYKRGQY--IPGLKINGMDVLAIKAA 279 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 + Y + KGP++ E +TYRY GHSMSDP YRTREEI MRS +DPI ++++LL Sbjct: 280 VQYGREYTTSGKGPLVFEYVTYRYGGHSMSDPGTTYRTREEIQRMRSTNDPIAGLKQKLL 339 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--PAELYSDILI 364 SE +LK I+ + RK +++ V A+ EPD P L+ D + Sbjct: 340 DWGVTSEEELKAIDKDARKYVDDEVAEAELMTEPDATPRILFEDTYV 386 >gi|225555454|gb|EEH03746.1| pyruvate dehydrogenase [Ajellomyces capsulatus G186AR] Length = 405 Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 164/347 (47%), Positives = 222/347 (63%), Gaps = 21/347 (6%) Query: 35 DIPFL-----EGFEVSEFNK--------EQELSA-YRLMLLIRRFEEKAGQLYGMGMVGG 80 D PF E FE E + +QEL YR M+ IRR E A +LY + G Sbjct: 44 DKPFTVKLSDESFETYELDPPPYTLETTKQELKQMYRDMVSIRRMEMAADRLYKEKKIRG 103 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEAV G++ ++T+ D++ITAYR HG L G I+ EL GR+ GI+ GK Sbjct: 104 FCHLSTGQEAVATGIEHAITKDDKLITAYRCHGFALLRGGTVKSIIGELLGRREGIAYGK 163 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMF+ KN FYGG+GIVGAQV +G G+AFA +Y + +GDGA+NQGQV+E+ Sbjct: 164 GGSMHMFA-KN-FYGGNGIVGAQVPVGAGLAFAQQYNDEKTTTIALYGDGASNQGQVFEA 221 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A LWNL I+ ENN+Y MGT+ +RA+A T++ KRG IPG++++GMD+ A+KA Sbjct: 222 FNMAKLWNLPCIFGCENNKYGMGTAANRAAALTDYYKRGQY--IPGLKINGMDVLAIKAA 279 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 + Y + KGP++ E +TYRY GHSMSDP YRTREEI MRS +DPI ++++LL Sbjct: 280 VQYGREYTTSGKGPLVFEYVTYRYGGHSMSDPGTTYRTREEIQRMRSTNDPIAGLKQKLL 339 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--PAELYSDILI 364 SE +LK I+ + RK +++ V A+ EPD P L+ D + Sbjct: 340 DWGVTSEEELKAIDKDARKYVDDEVAEAELMTEPDATPRILFEDTYV 386 >gi|156842366|ref|XP_001644551.1| hypothetical protein Kpol_1052p41 [Vanderwaltozyma polyspora DSM 70294] gi|156115196|gb|EDO16693.1| hypothetical protein Kpol_1052p41 [Vanderwaltozyma polyspora DSM 70294] Length = 408 Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 154/334 (46%), Positives = 218/334 (65%), Gaps = 11/334 (3%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 +D+P L F NK+ L Y+ M+++RR E LY + GFCHL +GQEA+ V Sbjct: 55 LDVPDL-AFNT---NKQTLLQMYKDMVIVRRMEMACDALYKAKKIRGFCHLSVGQEAIAV 110 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G++ ++T D +IT+YR HG G I+AEL G++ G+S GKGGSMH+F+ GF Sbjct: 111 GIENAITHKDSVITSYRCHGFTYMRGASVKAILAELMGKRSGVSFGKGGSMHLFAP--GF 168 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 YGG+GIVGAQV LG G+AFA++Y+ D +GDGA+NQGQV+ES+N+A LWNL V++ Sbjct: 169 YGGNGIVGAQVPLGAGLAFAHQYKNEDACSFTLYGDGASNQGQVFESYNMAKLWNLPVVF 228 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 ENN+Y MGT+ SR+SA T++ KRG IPG++V+GMDI AV A +C + KG Sbjct: 229 ACENNKYGMGTAASRSSAITDYYKRGQY--IPGLKVNGMDILAVYQASKFAKEWCISGKG 286 Query: 274 PIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P+++E TYRY GHSMSDP YRTR+EI MRS +DPI ++ LL A+E ++K Sbjct: 287 PLVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKLHLLELGIATEAEIKAY 346 Query: 333 EMNVRKIINNSVEFAQSDKEPDP--AELYSDILI 364 + + RK ++ V A + P+P + L+ D+ + Sbjct: 347 DKSARKYVDEQVALADAAAPPEPKLSILFEDVYV 380 >gi|119480165|ref|XP_001260111.1| pyruvate dehydrogenase [Neosartorya fischeri NRRL 181] gi|119408265|gb|EAW18214.1| pyruvate dehydrogenase [Neosartorya fischeri NRRL 181] Length = 400 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 166/357 (46%), Positives = 221/357 (61%), Gaps = 18/357 (5%) Query: 21 VSAKRAATSSVDCVDIPFLE-GFEVSEFN---------KEQELSAYRLMLLIRRFEEKAG 70 V+ + T D+P E FE F+ K Q + Y+ ML IRR E A Sbjct: 31 VNVENVPTEDDKPFDVPIPEDSFETYHFDHPPYTVGTTKRQLKNMYQDMLTIRRLELAAD 90 Query: 71 QLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELT 130 LY + GFCHL GQEAV VG++ +++ D++ITAYR HG G I+ EL Sbjct: 91 ALYKQKKIRGFCHLSTGQEAVAVGIEYGISKEDKLITAYRSHGFTFMRGGSIKSIVGELL 150 Query: 131 GRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDG 190 GRQ GIS GKGGSMHMF GF+GG+GIVGA V +G GIAFA +Y D + V +GDG Sbjct: 151 GRQDGISHGKGGSMHMFC--EGFFGGNGIVGAHVPVGAGIAFAQQYNNRDNVTVDVYGDG 208 Query: 191 AANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD 250 AANQGQV+E+FN+A LWNL V++ ENN+Y MGTS RASA T++ KRG+ IPG++V+ Sbjct: 209 AANQGQVHEAFNMAKLWNLPVLFGCENNKYGMGTSAERASAMTDYYKRGLY--IPGLRVN 266 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHD 309 GMD+ AV A + + RA KGP++ E +TYRY GHSMSDP YRTREE+ R++ D Sbjct: 267 GMDVLAVMAAVKHGREFIRAGKGPLVYEYVTYRYAGHSMSDPGVAYRTREELKAERAS-D 325 Query: 310 PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA--ELYSDILI 364 P+ R++L+ +E + K I+ NVR +N+ V A+ EP+P L+ DI + Sbjct: 326 PVSNFREQLIDWGIITEDEAKTIDKNVRGKVNHEVAEAEKMPEPEPRLDVLFQDIYV 382 >gi|154318926|ref|XP_001558781.1| hypothetical protein BC1G_02852 [Botryotinia fuckeliana B05.10] gi|150857982|gb|EDN33174.1| hypothetical protein BC1G_02852 [Botryotinia fuckeliana B05.10] Length = 409 Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 167/362 (46%), Positives = 224/362 (61%), Gaps = 23/362 (6%) Query: 20 SVSAKRAATSSVDCVDIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRF 65 S A + A D D PF E FE E + K++ Y M+ +RR Sbjct: 35 SAHADKDAVPQED--DKPFTLQLSDESFETYELDPPSYTMETTKKELKQMYIDMVSMRRM 92 Query: 66 EEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKI 125 E A +LY + GFCHL GQEAV VG++ SLT+ D +ITAYR HG L G I Sbjct: 93 EMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHSLTKEDDIITAYRCHGFALMRGASVKSI 152 Query: 126 MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVV 185 + EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV +G G+AFA++Y + + V Sbjct: 153 IGELLGRREGIAYGKGGSMHMFT--KGFYGGNGIVGAQVPVGAGLAFAHQYNGNKNVSVA 210 Query: 186 CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIP 245 +GDGA+NQGQV+E+FN+A LW L V++ ENN+Y MGT+ +R+SA T++ KRG IP Sbjct: 211 LYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTAANRSSALTDYYKRGQY--IP 268 Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEM 304 G++V+GMD AVKA + A Y A GP+++E +TYRY GHSMSDP YRTREEI M Sbjct: 269 GLKVNGMDALAVKAAVKHAKEYANAGNGPLVLEYVTYRYGGHSMSDPGTTYRTREEIQRM 328 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--PAELYSDI 362 RS DPI ++++L+ +E +LK I+ R ++ V+ A+ PD P LY DI Sbjct: 329 RSTQDPIAGLKQKLIEWNVTTEDELKAIDKEARAKVDAEVKEAEEMPFPDATPQILYEDI 388 Query: 363 LI 364 + Sbjct: 389 YV 390 >gi|195044091|ref|XP_001991752.1| GH12828 [Drosophila grimshawi] gi|193901510|gb|EDW00377.1| GH12828 [Drosophila grimshawi] Length = 399 Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 158/343 (46%), Positives = 220/343 (64%), Gaps = 12/343 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF EG E++ + KE+ L Y M IRR E AG LY ++ G Sbjct: 34 ATEATVQVNRPFKLHRLDEGPEMTVQLTKEEALKYYTQMQTIRRIETSAGNLYKEKIIRG 93 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV ++AELTG + G ++GK Sbjct: 94 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPLGVLAELTGMKSGCARGK 153 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+S FYGG+GIVGAQV LG G+ A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 154 GGSMHMYSPN--FYGGNGIVGAQVPLGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEA 211 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 212 YNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 269 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y H GP+++E TYRY GHSMSDP +YRTREEI E+R DPI ++ + Sbjct: 270 TEFAIKYVNTH-GPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 328 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + ++K I++ VRK ++ + A+SD E + L++D+ Sbjct: 329 ELGLITTDEVKAIDLKVRKEVDEATALAKSDTELPLSHLWTDV 371 >gi|242003450|ref|XP_002422736.1| pyruvate dehydrogenase E1 component alpha [Pediculus humanus corporis] gi|212505569|gb|EEB09998.1| pyruvate dehydrogenase E1 component alpha [Pediculus humanus corporis] Length = 388 Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 151/317 (47%), Positives = 210/317 (66%), Gaps = 13/317 (4%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++ + L Y M IRR E AG LY +V GFCHL GQEA VGM+ ++ D +I Sbjct: 55 IDRNEALKFYTEMNTIRRLEAAAGSLYKEKIVRGFCHLYSGQEACCVGMRAAMRSQDGII 114 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR+HG G+ +I+ ELTG++ G ++GKGGSMHM+ K F+GG+GIVGAQV L Sbjct: 115 TAYRDHGWAYIMGISIKEILCELTGKKLGCARGKGGSMHMYCDK--FFGGNGIVGAQVPL 172 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AFA +Y + +C+ +GDGAANQGQV+E++N++ALW L VIYV ENN Y MGTS Sbjct: 173 GAGVAFAYQYLNTGGVCIALYGDGAANQGQVFEAYNMSALWKLPVIYVCENNGYGMGTSA 232 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA T + RG IPG+ VDGMD+ AV+ A+ +C A KGP+++E+ TYRY G Sbjct: 233 ERASASTTYYSRGDY--IPGIWVDGMDVLAVREATRFAIDHCCAGKGPLVMEVATYRYSG 290 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREE+ E+R DP+ ++++++ + +L K ++ V+ Sbjct: 291 HSMSDPGTSYRTREEVQEVRQTRDPVTSFKEKIINAGLVTLDEL--------KTVDEGVQ 342 Query: 346 FAQSDKEPDPAELYSDI 362 A+++KE DP EL +DI Sbjct: 343 IAKAEKEVDPTELTADI 359 >gi|6679263|ref|NP_032837.1| pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial precursor [Mus musculus] gi|548411|sp|P35487|ODPAT_MOUSE RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; AltName: Full=PDHE1-A type II; Flags: Precursor gi|567231|gb|AAA53047.1| pyruvate dehydrogenase [Mus musculus] gi|26345662|dbj|BAC36482.1| unnamed protein product [Mus musculus] gi|72679669|gb|AAI00461.1| Pdha2 protein [Mus musculus] gi|148680125|gb|EDL12072.1| pyruvate dehydrogenase E1 alpha 2 [Mus musculus] Length = 391 Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 162/330 (49%), Positives = 228/330 (69%), Gaps = 7/330 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G S + + L YR M +IRR E KA QLY + GFCHL Sbjct: 35 ATCDIKKCDLYRLEEGPPTSTVLTRAEALKYYRTMQVIRRMELKADQLYKQKFIRGFCHL 94 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +IT+YR HG G+ I+AELTGR+GG +KGKGGSM Sbjct: 95 CDGQEACCVGLEAGINPTDHVITSYRAHGFCYTRGLSVKSILAELTGRKGGCAKGKGGSM 154 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+ KN FYGG+GIVGAQV LG G+AFA KY ++ ++C+ +GDGAANQGQV+E++N++ Sbjct: 155 HMYG-KN-FYGGNGIVGAQVPLGAGVAFACKYLKNGQVCLALYGDGAANQGQVFEAYNMS 212 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L +++ ENN Y MGTS R++A T++ K+G F IPG++V+GMDI V+ A Sbjct: 213 ALWKLPCVFICENNLYGMGTSNERSAASTDYHKKG--FIIPGLRVNGMDILCVREATKFA 270 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 +CR+ KGPI++E+ TYRY GHSMSDP +YR+REE++ +RS DPI +R+R++ N Sbjct: 271 ADHCRSGKGPIVMELQTYRYHGHSMSDPGISYRSREEVHNVRSKSDPIMLLRERIISNNL 330 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +LKEI+ +V+K + ++ +FA +D EP Sbjct: 331 SNIEELKEIDADVKKEVEDAAQFATTDPEP 360 >gi|302851905|ref|XP_002957475.1| hypothetical protein VOLCADRAFT_68179 [Volvox carteri f. nagariensis] gi|300257279|gb|EFJ41530.1| hypothetical protein VOLCADRAFT_68179 [Volvox carteri f. nagariensis] Length = 357 Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 155/320 (48%), Positives = 217/320 (67%), Gaps = 5/320 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E N + +S Y+LM +RR E A +Y + GFCHL GQEAV+ G++ ++T D Sbjct: 14 IVETNVSELMSFYKLMYKMRRMEIAADMMYKAKFIRGFCHLYDGQEAVLTGIEAAITLQD 73 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +IT+YR+H ++ G ++MAEL G++ G ++G GGSMH+++ KN FYGG+GIVGAQ Sbjct: 74 SIITSYRDHCQHVSRGGTVLELMAELMGKREGATRGLGGSMHIYNRKNNFYGGNGIVGAQ 133 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + LG GIA A+KYR +C+ +GDGAANQGQ YE+ N+A LWNL I+V ENN Y MG Sbjct: 134 IPLGAGIALAHKYRGEPNVCITMYGDGAANQGQKYEALNMAGLWNLPAIFVCENNHYGMG 193 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+ RA+ NF RG IPG++VDGMD+ AVK + A AY A+ GPII+EM TYR Sbjct: 194 TAEWRAAKSPNFYTRGDY--IPGIKVDGMDVLAVKQAVAFAKAYALAN-GPIIMEMDTYR 250 Query: 284 YRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 Y GHSMSDP + YRTR+EIN MR+ DPIE+V+K LL N S + K ++ ++K I++ Sbjct: 251 YHGHSMSDPGSTYRTRDEINAMRTERDPIERVKKLLLANGVES-AEFKRLDREIKKEIDD 309 Query: 343 SVEFAQSDKEPDPAELYSDI 362 +VE A++ P + L+ ++ Sbjct: 310 AVEAAKAGSIPPDSWLWKNM 329 >gi|258592349|emb|CBE68658.1| Pyruvate dehydrogenase E1 component, alpha subunit [NC10 bacterium 'Dutch sediment'] Length = 323 Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 146/321 (45%), Positives = 199/321 (61%), Gaps = 1/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + +++ + R MLL+RRFEEK ++Y MG +GGF HL IGQEAV G L D Sbjct: 1 MRKLERKELVELLRQMLLMRRFEEKCAEMYTMGKIGGFLHLYIGQEAVATGALSVLRPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +I +YREHGH LA G D KIMAEL GR G+ KGKGGSMH+F + F GGH IV Q Sbjct: 61 YVIASYREHGHALARGCDPGKIMAELFGRADGLCKGKGGSMHLFDKTHNFLGGHAIVAGQ 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + +GTG AFA++Y D++ + FGD A NQG +E+FN+AALW+L ++Y+ ENN+Y MG Sbjct: 121 IPIGTGAAFASQYEGKDQVTLCFFGDAAVNQGVFHEAFNLAALWHLPIVYICENNRYGMG 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+V RA+ +R ++ +PG VDGMD+ AV+ + AV R + P +IE TYR Sbjct: 181 TAVERATPVKELYRRAEAYGMPGEAVDGMDVLAVRECVGTAVERARRERIPSLIEAKTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGHSM+DP YRT+EEI E DP+ R L E D K +E VR + + Sbjct: 241 FRGHSMADPGTYRTKEEI-EREKQRDPLVLFRDYLTAEAMIKESDWKALEKEVRVTVEEA 299 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V +A + EP L +D+ + Sbjct: 300 VRYADASPEPPVEWLCTDVYV 320 >gi|71019541|ref|XP_760001.1| hypothetical protein UM03854.1 [Ustilago maydis 521] gi|46099527|gb|EAK84760.1| hypothetical protein UM03854.1 [Ustilago maydis 521] Length = 411 Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 152/330 (46%), Positives = 214/330 (64%), Gaps = 9/330 (2%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 +++P LE E +K++ + Y M+ +RR E A QLY ++ GFCHL IGQEAV V Sbjct: 68 LEVPKLEW----ETSKDELVHLYSEMVKMRRMEMAADQLYKQKLIRGFCHLAIGQEAVAV 123 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 GM+ + D++ITAYR H + G ++AEL GRQ GISKGKGGSMHMF+ F Sbjct: 124 GMEAGMKPSDKLITAYRCHPFTVQKGGSIKSVIAELFGRQDGISKGKGGSMHMFTPT--F 181 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 +GG+GIVGAQV +G GIAFA +Y ++ +GDGA+NQGQV+E++N+A LWNL ++ Sbjct: 182 FGGNGIVGAQVPVGAGIAFAQQYMNTNDATFAMYGDGASNQGQVFEAYNMAKLWNLPCVF 241 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 V ENN+Y MGTS R+S T + RG IPG+QV+ MD+ AV A A Y G Sbjct: 242 VCENNKYGMGTSAERSSMNTQYYTRGDV--IPGIQVNAMDVLAVAAATKHASGYTLGGNG 299 Query: 274 PIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P+++E++TYRY GHS+SDP YRTR+EI MRS+ DPI+ ++ R+L E +LK I Sbjct: 300 PLLMELVTYRYGGHSLSDPGTTYRTRDEIQTMRSSSDPIQGLKARMLDWGVVEEAELKRI 359 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + ++ ++ +VE A+ +P L++DI Sbjct: 360 DKAAKEEVDQAVEEAKQSPQPSEHSLWTDI 389 >gi|603419|gb|AAB64705.1| Pda1p: alpha subunit of pyruvate dehydrogenase [Saccharomyces cerevisiae] gi|207345769|gb|EDZ72479.1| YER178Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|259146108|emb|CAY79368.1| Pda1p [Saccharomyces cerevisiae EC1118] gi|323333825|gb|EGA75216.1| Pda1p [Saccharomyces cerevisiae AWRI796] gi|323337867|gb|EGA79107.1| Pda1p [Saccharomyces cerevisiae Vin13] gi|323348864|gb|EGA83102.1| Pda1p [Saccharomyces cerevisiae Lalvin QA23] gi|323355352|gb|EGA87177.1| Pda1p [Saccharomyces cerevisiae VL3] Length = 443 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 153/330 (46%), Positives = 217/330 (65%), Gaps = 8/330 (2%) Query: 39 LEGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 LE ++S E +K L Y+ M++IRR E LY + GFCHL +GQEA+ VG++ Sbjct: 90 LEPPDLSYETSKATLLQMYKDMVIIRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIEN 149 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 ++T+ D +IT+YR HG G ++AEL GR+ G+S GKGGSMH+++ GFYGG+ Sbjct: 150 AITKLDSIITSYRCHGFTFMRGASVKAVLAELMGRRAGVSYGKGGSMHLYAP--GFYGGN 207 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GIVGAQV LG G+AFA++Y+ D +GDGA+NQGQV+ESFN+A LWNL V++ EN Sbjct: 208 GIVGAQVPLGAGLAFAHQYKNEDACSFTLYGDGASNQGQVFESFNMAKLWNLPVVFCCEN 267 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N+Y MGT+ SR+SA T + KRG IPG++V+GMDI AV A +C + KGP+++ Sbjct: 268 NKYGMGTAASRSSAMTEYFKRGQ--YIPGLKVNGMDILAVYQASKFAKDWCLSGKGPLVL 325 Query: 278 EMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E TYRY GHSMSDP YRTR+EI MRS +DPI ++ L+ A+E ++K + + Sbjct: 326 EYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLIDLGIATEAEVKAYDKSA 385 Query: 337 RKIINNSVEFAQSDKEPDP--AELYSDILI 364 RK ++ VE A + P+ + L+ D+ + Sbjct: 386 RKYVDEQVELADAAPPPEAKLSILFEDVYV 415 >gi|193629643|ref|XP_001950931.1| PREDICTED: probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like [Acyrthosiphon pisum] Length = 395 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 164/368 (44%), Positives = 226/368 (61%), Gaps = 24/368 (6%) Query: 15 MALNPSVSAKRAA----TSSVDCVDIPFLEGFEVSEF---------------NKEQELSA 55 + L VSA R TS+ C ++ F++ F KE ++ Sbjct: 2 ITLTTKVSAVRNTLQKLTSTWQCRNLATEATFDIKAFKLHKLESGPNTTVTVTKEDAINY 61 Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M IRR E AG LY +V GFCHL GQEA VGMK + + D +I+AYR HG Sbjct: 62 YKQMQYIRRIETAAGNLYKEKIVRGFCHLYSGQEACAVGMKSAFRDQDSIISAYRVHGWT 121 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 G ++++ELTGR GG+ +GKGGSMHM+ KN FYGG+GIVGAQV LGTGIA A + Sbjct: 122 YLMGAKPVEVLSELTGRIGGVVRGKGGSMHMYG-KN-FYGGNGIVGAQVPLGTGIALAAQ 179 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y + +C +GDGA+NQGQV+E++N+A LWNL ++V ENN YAMGTS R+++ T++ Sbjct: 180 YLGTGGVCFTLYGDGASNQGQVFEAYNMAKLWNLPCVFVCENNGYAMGTSSERSASNTSY 239 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-AN 294 RG IPG+ VDGMD+ AV+ AV +C GPI++E +TYRY GHSMSDP + Sbjct: 240 YTRGDY--IPGIWVDGMDVLAVREASKFAVDHCVNGNGPILLETVTYRYSGHSMSDPGTS 297 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRTREEI +R DPI ++++L A+ DLK+I+ ++ I+ +V ++ D+E Sbjct: 298 YRTREEIQAVRMTRDPITSFKEKILSTNLATVDDLKKIDNEIKIEIDQAVIKSKEDEEIT 357 Query: 355 PAELYSDI 362 EL SD+ Sbjct: 358 LDELASDV 365 >gi|157136707|ref|XP_001656885.1| pyruvate dehydrogenase [Aedes aegypti] gi|108869893|gb|EAT34118.1| pyruvate dehydrogenase [Aedes aegypti] Length = 387 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 147/315 (46%), Positives = 213/315 (67%), Gaps = 6/315 (1%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 +++ L+ Y M IRR E AG LY +V GFCHL GQEA VGM ++ D +I+A Sbjct: 49 RDEALAYYSAMQKIRRLETSAGNLYKEKIVRGFCHLYSGQEACAVGMNAAMRPQDNIISA 108 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR HG GVD +++ELTG+QGG ++GKGGSMHM++ FYGG+GIVGAQV LG Sbjct: 109 YRVHGWTHLMGVDVKGVLSELTGKQGGCARGKGGSMHMYAPN--FYGGNGIVGAQVPLGA 166 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A A KY+ ++ +C+ +GDGA+NQGQV+E++N+A LWNL I+V ENN Y MGTS R Sbjct: 167 GVALACKYKGNNGVCLSLYGDGASNQGQVFEAYNMAYLWNLPCIFVCENNGYGMGTSADR 226 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 +S TN+ +RG +PG+ VDGMD+ AVK D A+ Y + GP+++E+ TYRY GHS Sbjct: 227 SSCNTNYYQRGDV--LPGLWVDGMDVVAVKLATDFAIDYVLKN-GPLVMEVYTYRYSGHS 283 Query: 289 MSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 MSDP +YRTR+E+ E+R DPI + ++++ + +LK+I+ +++K ++ + A Sbjct: 284 MSDPGTSYRTRDEVQEVRQTRDPISSFKDKIINAGLVTADELKKIDADIKKEVDEATAAA 343 Query: 348 QSDKEPDPAELYSDI 362 ++D E EL +D+ Sbjct: 344 KADTEIGLPELSTDV 358 >gi|195028267|ref|XP_001986998.1| GH20215 [Drosophila grimshawi] gi|193902998|gb|EDW01865.1| GH20215 [Drosophila grimshawi] Length = 513 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 156/335 (46%), Positives = 218/335 (65%), Gaps = 7/335 (2%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 ++ C ++P +V E ++E L YR M+ +RR E G +Y V GFCHL GQ Sbjct: 37 NTFKCYELPKGPQMDV-ELSREDALKMYRQMVEVRRIENTCGNMYKARQVRGFCHLYSGQ 95 Query: 89 EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 EAV VGM L + D +ITAYR HG GV A ++ EL G + G S+GKGGSMH + Sbjct: 96 EAVAVGMCAVLRKFDSVITAYRSHGWTYLMGVSAQGLIGELVGVKSGCSRGKGGSMHTYG 155 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 + FYGG+GIVGAQV +G GIA A++YR +CV C+GDGAANQGQV+E+FN+A LW Sbjct: 156 --DNFYGGNGIVGAQVPIGAGIALAHRYRGDGGVCVTCYGDGAANQGQVFEAFNMAKLWC 213 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L I+V ENNQY MGT V+R +A T+F RG +PG+ VDG ++ AV++ + AV Y Sbjct: 214 LPCIFVCENNQYGMGTHVARHAALTDFYMRGQY--LPGLWVDGNEVLAVRSATEFAVDYA 271 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 H GPI++EM TYR+ GHSMSDP +YR+REE++++R++ DPI+ R +++ A E Sbjct: 272 VKH-GPIVLEMYTYRFEGHSMSDPGKSYRSREEVSKVRADRDPIDSFRTQIIKLCLAEEA 330 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +LK+I+ VR + V+ +D+E EL +D+ Sbjct: 331 ELKKIDAEVRAEVAEVVKKVLADREVGLDELATDV 365 >gi|116789182|gb|ABK25148.1| unknown [Picea sitchensis] Length = 400 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 152/325 (46%), Positives = 210/325 (64%), Gaps = 10/325 (3%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + + Y M +RR E A LY ++ GFCHL GQEAV GM+ +LT D Sbjct: 62 IVETTPAELMKFYADMFTMRRMEIAADSLYKSKLIRGFCHLYDGQEAVCTGMEAALTRKD 121 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +ITAYR+H G ++ AEL GR+ G S GKGGSMH + +NGFYGGHGIVGAQ Sbjct: 122 CIITAYRDHCLFYGRGGTLLEVFAELMGRKDGCSHGKGGSMHFYKKENGFYGGHGIVGAQ 181 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V LG G+AFA KY +++ + +GDGAANQGQ++E+ N++ALWNL + V ENN Y MG Sbjct: 182 VPLGCGLAFAQKYSKAEAVTFALYGDGAANQGQLFEALNMSALWNLPAVLVCENNHYGMG 241 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEML 280 T+ RA+ + KRG PG++VDGMD+ AVK +A + + H GPII+EM Sbjct: 242 TAEWRAAKSPAYYKRGD--YAPGLKVDGMDVFAVK----QAAKFAKEHALKNGPIILEMD 295 Query: 281 TYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRY GHSMSDP + YRTR+EI+ +R DPIE+VRK +L + A+ +LK+IE +K Sbjct: 296 TYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLVLAHNIATPAELKDIEKEAKKE 355 Query: 340 INNSVEFAQSDKEPDPAELYSDILI 364 +++++ A+ PD +EL+S + + Sbjct: 356 VDDAIALAKECSLPDSSELFSHVYV 380 >gi|195447244|ref|XP_002071127.1| GK25307 [Drosophila willistoni] gi|194167212|gb|EDW82113.1| GK25307 [Drosophila willistoni] Length = 632 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 154/335 (45%), Positives = 218/335 (65%), Gaps = 7/335 (2%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 ++ C D+ +V E ++E LS Y M+ +RR E A + Y + GFCHL GQ Sbjct: 60 NTFKCYDLETGPPLDV-ELSREDALSMYTKMVEVRRLEIIAAEFYKQKKIRGFCHLYNGQ 118 Query: 89 EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 EAV VGM + + D +ITAYR H GV ++AEL G + G S+GKGGSMHM++ Sbjct: 119 EAVAVGMTSVMRKTDTVITAYRCHAWTYLMGVSMYALLAELLGVRTGCSRGKGGSMHMYA 178 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 + +YGG+GIVGAQV +G GIA A++Y+ D +C+VC+GDGAANQGQ++E++N+A LW Sbjct: 179 --DNYYGGNGIVGAQVPMGAGIALAHRYKDDDGVCIVCYGDGAANQGQIFEAYNMAKLWC 236 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L I+V ENN+Y MGT SRASA T+F RG IPG+ VDG + AV++ A+ + Sbjct: 237 LPCIFVCENNEYGMGTETSRASANTDFYMRGQY--IPGLWVDGNQVLAVRSATQFAIDFA 294 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 +++ GPI++EM TYRY GHSMSDP +YRTR+E+ +R DPI R +++ ASE Sbjct: 295 QSN-GPIVLEMFTYRYMGHSMSDPGTSYRTRDEVQNVRETRDPITNFRNQVVRLCLASEE 353 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +LK+I+ NV+K + + A D+E D EL +D+ Sbjct: 354 ELKQIDDNVKKQVGLDAKKALQDREVDEHELTADV 388 >gi|37362644|ref|NP_011105.2| Pda1p [Saccharomyces cerevisiae S288c] gi|730222|sp|P16387|ODPA_YEAST RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; AltName: Full=Pyruvate dehydrogenase complex component E1 alpha; Short=PDHE1-A; Flags: Precursor gi|298059|emb|CAA50657.1| PDA1 [Saccharomyces cerevisiae] gi|151944896|gb|EDN63155.1| pyruvate dehydrogenase alpha subunit (E1 alpha) [Saccharomyces cerevisiae YJM789] gi|190405734|gb|EDV09001.1| pyruvate dehydrogenase alpha subunit [Saccharomyces cerevisiae RM11-1a] gi|256271305|gb|EEU06375.1| Pda1p [Saccharomyces cerevisiae JAY291] gi|285811813|tpg|DAA07841.1| TPA: Pda1p [Saccharomyces cerevisiae S288c] Length = 420 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 150/322 (46%), Positives = 212/322 (65%), Gaps = 7/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +K L Y+ M++IRR E LY + GFCHL +GQEA+ VG++ ++T+ D + Sbjct: 75 ETSKATLLQMYKDMVIIRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIENAITKLDSI 134 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YR HG G ++AEL GR+ G+S GKGGSMH+++ GFYGG+GIVGAQV Sbjct: 135 ITSYRCHGFTFMRGASVKAVLAELMGRRAGVSYGKGGSMHLYAP--GFYGGNGIVGAQVP 192 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA++Y+ D +GDGA+NQGQV+ESFN+A LWNL V++ ENN+Y MGT+ Sbjct: 193 LGAGLAFAHQYKNEDACSFTLYGDGASNQGQVFESFNMAKLWNLPVVFCCENNKYGMGTA 252 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 SR+SA T + KRG IPG++V+GMDI AV A +C + KGP+++E TYRY Sbjct: 253 ASRSSAMTEYFKRGQ--YIPGLKVNGMDILAVYQASKFAKDWCLSGKGPLVLEYETYRYG 310 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YRTR+EI MRS +DPI ++ L+ A+E ++K + + RK ++ V Sbjct: 311 GHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLIDLGIATEAEVKAYDKSARKYVDEQV 370 Query: 345 EFAQSDKEPDP--AELYSDILI 364 E A + P+ + L+ D+ + Sbjct: 371 ELADAAPPPEAKLSILFEDVYV 392 >gi|172108|gb|AAA34847.1| pyruvate dehydrogenase precursor (EC 1.2.4.1) [Saccharomyces cerevisiae] Length = 420 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 150/322 (46%), Positives = 212/322 (65%), Gaps = 7/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +K L Y+ M++IRR E LY + GFCHL +GQEA+ VG++ ++T+ D + Sbjct: 75 ESSKATLLQMYKDMVIIRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIENAITKLDSI 134 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YR HG G ++AEL GR+ G+S GKGGSMH+++ GFYGG+GIVGAQV Sbjct: 135 ITSYRCHGFTFMRGASVKAVLAELMGRRAGVSYGKGGSMHLYAP--GFYGGNGIVGAQVP 192 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA++Y+ D +GDGA+NQGQV+ESFN+A LWNL V++ ENN+Y MGT+ Sbjct: 193 LGAGLAFAHQYKNEDACSFTLYGDGASNQGQVFESFNMAKLWNLPVVFCCENNKYGMGTA 252 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 SR+SA T + KRG IPG++V+GMDI AV A +C + KGP+++E TYRY Sbjct: 253 ASRSSAMTEYFKRGQ--YIPGLKVNGMDILAVYQASKFAKDWCLSGKGPLVLEYETYRYG 310 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YRTR+EI MRS +DPI ++ L+ A+E ++K + + RK ++ V Sbjct: 311 GHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLIDLGIATEAEVKAYDKSARKYVDEQV 370 Query: 345 EFAQSDKEPDP--AELYSDILI 364 E A + P+ + L+ D+ + Sbjct: 371 ELADAAPPPEAKLSILFEDVYV 392 >gi|328793432|ref|XP_623502.3| PREDICTED: probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like isoform 1 [Apis mellifera] Length = 387 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 162/315 (51%), Positives = 218/315 (69%), Gaps = 5/315 (1%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K++ + Y+ + IRR E AG LY +V GFCHL GQEA VG+K +L D +ITA Sbjct: 48 KDEAIELYKKLHTIRRMETAAGNLYKEKIVRGFCHLYSGQEACAVGIKAALRPQDCVITA 107 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR HG G++ ++AELTG++GG +KGKGGSMHM+S + FYGG+GIVGAQV LG Sbjct: 108 YRAHGWTYLMGIEPFGVLAELTGKKGGNAKGKGGSMHMYS--DNFYGGNGIVGAQVPLGV 165 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 GIAFA+KY + +CV +GDGAANQGQV+E +N+A LW++ I+V ENN Y MGTSV R Sbjct: 166 GIAFAHKYNNTGGVCVTLYGDGAANQGQVFEVYNMAKLWDVPCIFVCENNGYGMGTSVDR 225 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASA T++ RG IPG+ VDGMD+ AVK A+ YC + KGPI++E +TYRY GHS Sbjct: 226 ASASTDYYTRGDY--IPGIWVDGMDVLAVKQATKFAIDYCTSGKGPIVLETVTYRYSGHS 283 Query: 289 MSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 MSDP +YRTREEI E+R DPI ++R+L+ + ++K IE +RK ++++V+ A Sbjct: 284 MSDPGTSYRTREEIQEVRQTRDPITGFKERILNANLITPEEIKTIENEIRKQVDDAVKAA 343 Query: 348 QSDKEPDPAELYSDI 362 ++D E EL +DI Sbjct: 344 KTDTEIPLNELTADI 358 >gi|225424805|ref|XP_002271234.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 398 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 152/323 (47%), Positives = 214/323 (66%), Gaps = 10/323 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E ++ L + M L+RR E + LY ++ GFCHL GQEAV VGM+ ++T+ D + Sbjct: 62 ETTPKELLGFFHDMALMRRMEIASDSLYKSKLIRGFCHLYDGQEAVAVGMEAAITKKDCI 121 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H L G + +EL GRQ G SKGKGGSMH + +GFYGGHGIVGAQV Sbjct: 122 ITAYRDHCIYLGRGGTLVECFSELMGRQAGSSKGKGGSMHFYKKDSGFYGGHGIVGAQVP 181 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA KY + + + +GDGAANQGQ++E+ NIAAL +L I V ENN Y MGT+ Sbjct: 182 LGCGLAFAQKYSKDETVTFAMYGDGAANQGQLFEALNIAALLDLPAILVCENNHYGMGTA 241 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTY 282 RA+ + KRG +PG++VDGMD AVK +A + + H GPII+EM TY Sbjct: 242 EWRAAKSPAYYKRGD--YVPGLKVDGMDALAVK----QACRFAKEHALKNGPIILEMDTY 295 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI+ +R DPIE++RK +L ++ ++E +LK IE +R ++ Sbjct: 296 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILSHELSTEAELKSIEKKIRSEVD 355 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 +++ A+ P+P+EL++++ + Sbjct: 356 DAIAQAKESSMPEPSELFTNVYV 378 >gi|332521383|ref|ZP_08397839.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Lacinutrix algicola 5H-3-7-4] gi|332043111|gb|EGI79309.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Lacinutrix algicola 5H-3-7-4] Length = 333 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 150/321 (46%), Positives = 208/321 (64%), Gaps = 4/321 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM--KMSLTE 101 + + KE L Y M R+FE+K +Y V GF HL GQEAV+ G M LT+ Sbjct: 1 MQKVTKEVYLKWYEDMYFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVLAGALHAMDLTK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MITAYR H + GVD ++MAEL G+ G SKG GGSMH+FS ++ FYGGHGIVG Sbjct: 61 -DKMITAYRNHVQPIGMGVDPKRVMAELYGKATGTSKGLGGSMHIFSKEHRFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG GIAF +KY D + + CFGDGAA QG ++E+FN+A LWNL V++V ENN YA Sbjct: 120 GQIPLGAGIAFGDKYHDKDAVTICCFGDGAARQGSLHETFNLAMLWNLPVVFVCENNGYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV R + T+ K G+ + +P VDGM+ V D+A++ R+ GP +E+ T Sbjct: 180 MGTSVERTANHTDIWKLGLGYEMPCGPVDGMNPVKVAEAFDEAISRARSGGGPTFLELKT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD +YRT++E+NE + DPI QV++ +L K+A+E +LKEI+ V+ +++ Sbjct: 240 YRYRGHSMSDAQHYRTKDEVNEYKKI-DPITQVKEVILDKKYATEDELKEIDKRVKNLVS 298 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 +FA+ P+ +Y + Sbjct: 299 ECEKFAEESPYPEKNVMYDAV 319 >gi|261193072|ref|XP_002622942.1| pyruvate dehydrogenase E1 component alpha subunit [Ajellomyces dermatitidis SLH14081] gi|239589077|gb|EEQ71720.1| pyruvate dehydrogenase E1 component alpha subunit [Ajellomyces dermatitidis SLH14081] gi|239613658|gb|EEQ90645.1| pyruvate dehydrogenase E1 component alpha subunit [Ajellomyces dermatitidis ER-3] gi|327352583|gb|EGE81440.1| pyruvate dehydrogenase E1 component alpha subunit [Ajellomyces dermatitidis ATCC 18188] Length = 405 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 165/360 (45%), Positives = 226/360 (62%), Gaps = 25/360 (6%) Query: 26 AATSSVDCV----DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEE 67 AA++ + V D PF E FE E + K + Y M+ IRR E Sbjct: 31 AASAHAEAVPAEEDKPFTVKLSDESFETYELDPPPYTLQTTKRELKQMYHDMVSIRRMEM 90 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 + +LY + GFCHL GQEAV VG++ ++T+ D++ITAYR HG L G I+ Sbjct: 91 ASDRLYKEKKIRGFCHLSTGQEAVAVGIEHAITKDDKLITAYRCHGFALLRGGTVKSIIG 150 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 EL GR+ GI+ GKGGSMHMF+ KN FYGG+GIVGAQV +G G+AFA +Y + + Sbjct: 151 ELLGRREGIAYGKGGSMHMFA-KN-FYGGNGIVGAQVPVGAGLAFAQQYNGEKNTTITLY 208 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGA+NQGQV+E+FN+A LWNL I+ ENN+Y MGTS +R+SA T++ KRG IPG+ Sbjct: 209 GDGASNQGQVFEAFNMAKLWNLPCIFGCENNKYGMGTSANRSSALTDYYKRGQY--IPGL 266 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRS 306 +++GMD+ A+KA + Y + KGP++ E +TYRY GHSMSDP YRTREEI MRS Sbjct: 267 KINGMDVLAIKAAVQYGREYTTSGKGPLVFEYVTYRYGGHSMSDPGTTYRTREEIQRMRS 326 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--PAELYSDILI 364 +DPI ++++LL SE +LK I+ + RK +++ V A+ EPD P L+ D + Sbjct: 327 TNDPIAGLKQKLLDWGVTSEEELKAIDKDARKYVDDEVAEAELMAEPDATPRILFEDTYV 386 >gi|310793140|gb|EFQ28601.1| pyruvate dehydrogenase E1 component [Glomerella graminicola M1.001] Length = 409 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 153/322 (47%), Positives = 211/322 (65%), Gaps = 7/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K++ Y+ M+++R+ E A +LY + GFCHL GQEAV VG++ +L D + Sbjct: 72 DVTKKELKQMYKDMVVVRQLEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHALNREDDL 131 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG G I+ EL GR+ GIS GKGGSMHMF+ GFYGG+GIVGAQV Sbjct: 132 ITAYRCHGFAYMRGGTVRSIIGELLGRREGISYGKGGSMHMFA--KGFYGGNGIVGAQVP 189 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+AFA+KY V+ +GDGA+NQGQV+E+FN+A LWNL ++ ENN+Y MGT+ Sbjct: 190 VGAGLAFAHKYNGRKNASVILYGDGASNQGQVFEAFNMAKLWNLPALFGCENNKYGMGTA 249 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +R+SA T++ KRG IPG++V+GMD+ AVKA + Y A GP+++E +TYRY Sbjct: 250 AARSSALTDYYKRGQY--IPGLKVNGMDVLAVKAAVKYGKDYTVAENGPLVLEYVTYRYG 307 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YRTREEI MRS +DPI ++++++ +E +LK I+ R +N V Sbjct: 308 GHSMSDPGTTYRTREEIQRMRSTNDPIAGLKQKIMDWGVVTEDELKTIDKEARSFVNEEV 367 Query: 345 EFAQSDKEPD--PAELYSDILI 364 A++ PD P LY DI + Sbjct: 368 AAAEAMPVPDTTPKILYEDIYV 389 >gi|302039226|ref|YP_003799548.1| dehydrogenase (E1) component of pyruvate dehydrogenase complex subunit alpha (acetyl-transferring) [Candidatus Nitrospira defluvii] gi|300607290|emb|CBK43623.1| Dehydrogenase (E1) component of pyruvate dehydrogenase complex, alpha subunit (acetyl-transferring) [Candidatus Nitrospira defluvii] Length = 325 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 144/324 (44%), Positives = 212/324 (65%), Gaps = 4/324 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +++ +K+ LS YR MLLIRRFEEK+ ++Y + + GF HL IG+EA+ VG +L D Sbjct: 1 MTDMDKDDLLSLYRQMLLIRRFEEKSAEMYALAKIAGFLHLYIGEEAIAVGAIAALRPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 I+AYR+HGH LA G D ++MAEL G+ G+ +GKGGSMH+ + F GG+ IVG Sbjct: 61 YAISAYRDHGHCLARGSDPGQVMAELFGKATGLCQGKGGSMHLVDLAHRFMGGYAIVGGH 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + L TG+AFA KY++ D + V FG+GA GQ +E+FN+AALW L VI++ ENN+Y MG Sbjct: 121 IPLATGLAFATKYQKQDLVTVCFFGEGAVPSGQAHEAFNLAALWKLPVIFICENNRYGMG 180 Query: 224 TSVSRASA-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T V RA A N ++ S+ I +VDGMD+ AV+A M V RA GP IE +TY Sbjct: 181 TPVHRAVALYENVAEAARSYGIMAERVDGMDVLAVRALMRTVVDQIRAGHGPFFIEAMTY 240 Query: 283 RYRGHSMSDPA--NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 R+ GHSM+DP+ +YR+++E+ E R DP+ +++++L E D K +E +V +I+ Sbjct: 241 RFMGHSMADPSHGHYRSKDEVEEHRKR-DPLVLLKQQILDQALCVEADFKPLEQDVGEIV 299 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +V+FA P+P+ L+ D+++ Sbjct: 300 AAAVKFADESPFPEPSALHRDVMV 323 >gi|190347883|gb|EDK40237.2| hypothetical protein PGUG_04335 [Meyerozyma guilliermondii ATCC 6260] Length = 396 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 163/357 (45%), Positives = 226/357 (63%), Gaps = 18/357 (5%) Query: 22 SAKRA-ATSSVDCVDIPF----LEGFEVS----EFNKEQE--LSAYRLMLLIRRFEEKAG 70 +A+R AT S D V I EG+E+ EF E+E L Y+ M++IRR E A Sbjct: 15 AARRGMATGSSDLVSIQLPASSFEGYELDVPSLEFETEKETLLQMYKDMVVIRRMEMAAD 74 Query: 71 QLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELT 130 LY + GFCHL +GQEA+ VG++ ++T+ D +IT+YR HG G ++ EL Sbjct: 75 ALYKAKKIRGFCHLSVGQEAIAVGIENAITKQDSVITSYRCHGFAYVRGASVKAVLGELM 134 Query: 131 GRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDG 190 G++ G+S GKGGSMHMF+ GFYGG+GIVGAQV LG G+AFA+KYR +GDG Sbjct: 135 GKRSGVSYGKGGSMHMFAP--GFYGGNGIVGAQVPLGAGLAFAHKYRGEKNATFDLYGDG 192 Query: 191 AANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD 250 AANQGQV+E++N+A LW+L I+ ENN+Y MGTS SR+SA T++ KRG IPG++V+ Sbjct: 193 AANQGQVFEAYNMAKLWDLPCIFACENNKYGMGTSASRSSALTDYYKRGQY--IPGLKVN 250 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHD 309 GMD+ A A + + GP+++E TYRY GHSMSDP YRTREE+ MRS +D Sbjct: 251 GMDVLACYQASKFAKDWAVSGNGPLVLEYETYRYGGHSMSDPGTTYRTREEVQHMRSRND 310 Query: 310 PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AELYSDILI 364 PI ++ LL ASE ++K + + RK ++ V A++D P+ + L+ DI + Sbjct: 311 PIAGLKATLLDLNVASEDEIKAWDKDARKYVDEQVAEAENDAPPEAKMSILFEDIYV 367 >gi|54289523|gb|AAV32068.1| pyruvate dehydrogenase E1 alpha subunit [Nyctotherus ovalis] Length = 381 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 157/354 (44%), Positives = 222/354 (62%), Gaps = 12/354 (3%) Query: 20 SVSAKRAATSSVDCVDIPFLEGF--------EVSEFNKEQELSAYRLMLLIRRFEEKAGQ 71 SV A +S + +P E F + + ++ L YR M RR E + Sbjct: 10 SVLRGAARFASTATIKLPEYEVFNLDKSALPKTASTTSDEMLRYYREMNFQRRVEIMCDE 69 Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTG 131 +Y V GFCHL GQEAV VG++ +T+ D +ITAYR HG +L G A +++AE+ G Sbjct: 70 IYKKKEVRGFCHLMDGQEAVSVGVEAGITKDDHLITAYRCHGVLLGRGETADRLLAEMMG 129 Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 + G SKGKGGSMHM KN FYGG+GIVGA + LG GIAF Y + ++CV +GD A Sbjct: 130 KSTGASKGKGGSMHMSLRKNKFYGGNGIVGAHIPLGAGIAFGINYEKKKEVCVTMYGDSA 189 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 +NQGQ++E+ N+A LW L +IY+ ENN YAMGT+ +RA+ T + + IPG++ DG Sbjct: 190 SNQGQLFEAANMALLWKLPIIYLCENNLYAMGTACARATPNTKYYTKLAP--IPGIKGDG 247 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDP 310 MD+ AV+ + A +C + KGPI +E+ TYRY GHSMSDP +YR+REEI ++R DP Sbjct: 248 MDLFAVREIIKFAREWCLSGKGPICLELETYRYHGHSMSDPGLSYRSREEIAQVRKERDP 307 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP-AELYSDIL 363 I +V+K +L NK A+E +LKEIE RK++++ A+ PDP +L +D++ Sbjct: 308 IAKVKKIILDNKLATEDELKEIEKETRKVVDDVTLKAREAPWPDPEKDLLTDVM 361 >gi|12839413|dbj|BAB24543.1| unnamed protein product [Mus musculus] Length = 391 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 161/330 (48%), Positives = 227/330 (68%), Gaps = 7/330 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G S + + L YR M +IRR E KA QLY + GFCHL Sbjct: 35 ATCDIKKCDLYRLEEGPPTSTVLTRAEALKYYRTMQVIRRMELKADQLYKQKFIRGFCHL 94 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +IT+YR HG G+ I+AEL GR+GG +KGKGGSM Sbjct: 95 CDGQEACCVGLEAGINPTDHVITSYRAHGFCYTRGLSVKSILAELNGRKGGCAKGKGGSM 154 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+ KN FYGG+GIVGAQV LG G+AFA KY ++ ++C+ +GDGAANQGQV+E++N++ Sbjct: 155 HMYG-KN-FYGGNGIVGAQVPLGAGVAFACKYLKNGQVCLALYGDGAANQGQVFEAYNMS 212 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L +++ ENN Y MGTS R++A T++ K+G F IPG++V+GMDI V+ A Sbjct: 213 ALWKLPCVFICENNLYGMGTSNERSAASTDYHKKG--FIIPGLRVNGMDILCVREATKFA 270 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 +CR+ KGPI++E+ TYRY GHSMSDP +YR+REE++ +RS DPI +R+R++ N Sbjct: 271 ADHCRSGKGPIVMELQTYRYHGHSMSDPGISYRSREEVHNVRSKSDPIMLLRERIISNNL 330 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +LKEI+ +V+K + ++ +FA +D EP Sbjct: 331 SNIEELKEIDADVKKEVEDAAQFATTDPEP 360 >gi|189219018|ref|YP_001939659.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Methylacidiphilum infernorum V4] gi|189185876|gb|ACD83061.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Methylacidiphilum infernorum V4] Length = 358 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 146/309 (47%), Positives = 197/309 (63%), Gaps = 1/309 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E + E L Y+ M+LIRRFEEK+ Q + + GFCHL IGQEA+ VG+ SL D + Sbjct: 24 ELSSETRLELYKKMVLIRRFEEKSAQSFMQAKIKGFCHLYIGQEALAVGICSSLKPEDVV 83 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+HG LA G+ K MAEL G+ G SKG GGSMH+F + F+GGH IV AQ Sbjct: 84 ITAYRDHGIALARGLSPKKCMAELYGKATGTSKGLGGSMHLFDKEKRFFGGHAIVAAQCP 143 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L GIAFA KYR+ + + GDGA NQG +ES N+ +LW L V+YVIENN+YAMGT Sbjct: 144 LAAGIAFAQKYRKEKNVTLCLLGDGAVNQGVFHESLNLVSLWKLPVVYVIENNEYAMGTE 203 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + R++A K+ ++++ GM DGMD+ V++ + +AV R P++IE TYR+R Sbjct: 204 IHRSTAGLPLVKKSAAYDMAGMVTDGMDLEEVRSKVLEAVNLARNENCPVLIEARTYRFR 263 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDP YRT+EEI E + DP+ ++L + + I+ V+KII +V+ Sbjct: 264 GHSMSDPDTYRTKEEIAEAK-RRDPLLLYSQKLQQLGILNPDLIARIDKEVKKIIQEAVQ 322 Query: 346 FAQSDKEPD 354 FA+S EPD Sbjct: 323 FAESSPEPD 331 >gi|54289519|gb|AAV32066.1| pyruvate dehydrogenase E1 alpha subunit [Euplotes sp. BB-2004] Length = 389 Score = 298 bits (763), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 152/315 (48%), Positives = 203/315 (64%), Gaps = 3/315 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K + L+ Y+ M L+RR E + LY + GFCHL GQE++ VGM+ +LT D +I A Sbjct: 52 KSELLNYYKDMALMRRVEIVSDMLYKNKWIRGFCHLYDGQESITVGMEAALTMEDHIINA 111 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+H + G + +I+AE+ R G SKGKGGSMH + +KN FYGG+GIVGAQV +GT Sbjct: 112 YRDHTTAMGRGHTSYEIIAEMMQRSTGSSKGKGGSMHYYCSKNNFYGGNGIVGAQVPVGT 171 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+AF KY ++CV +GDGAANQGQ+YE+ N+A LW L +IY ENN+YAMGTS+ R Sbjct: 172 GVAFGIKYEGKKEVCVAMYGDGAANQGQIYEAANMAGLWKLPIIYTCENNKYAMGTSIER 231 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + NF KRG IPG++ ++ AV+ YC KGP+ E+ TYRY GHS Sbjct: 232 HAHNLNFYKRGDL--IPGVRCQANNVFAVRELYKWGKKYCTDGKGPLFFELQTYRYHGHS 289 Query: 289 MSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 MSDP YRTREE+NE R DPI V+K +L + A+E LKEI+ +R I+ VE Sbjct: 290 MSDPGITYRTREEVNEYRKTQDPILLVKKWILEHDIATEKYLKEIDKEIRARIDEEVEQI 349 Query: 348 QSDKEPDPAELYSDI 362 ++D P P EL ++I Sbjct: 350 KNDPMPAPEELMTEI 364 >gi|224107863|ref|XP_002314631.1| predicted protein [Populus trichocarpa] gi|222863671|gb|EEF00802.1| predicted protein [Populus trichocarpa] Length = 393 Score = 298 bits (763), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 165/359 (45%), Positives = 232/359 (64%), Gaps = 19/359 (5%) Query: 17 LNPSVSAKRAATSSVDCV----DIPFL-----EGFEVSEFNKEQELSAYRLMLLIRRFEE 67 L + S +R ++S D + IPF + + ++ LS +R M +RR E Sbjct: 19 LATAFSLRRPISTSTDPLTIETSIPFTTHRCDPPSRTVDTSPQELLSFFRDMATMRRMEI 78 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 A LY ++ GFCHL GQEAV VGM+ ++T+ D +ITAYR+H L G +I + Sbjct: 79 AADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDSIITAYRDHCTFLGRGGTLLEIFS 138 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 EL GRQGG S GKGGSMH + +GFYGGHGIVGAQV LG G+AFA+KY + D + + Sbjct: 139 ELMGRQGGCSSGKGGSMHFYKKNSGFYGGHGIVGAQVPLGCGLAFAHKYNKDDAVAFALY 198 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGAANQGQ++E+ NI+ALW+L +I V ENN Y MGT+ RA+ + KRG +PG+ Sbjct: 199 GDGAANQGQLFEALNISALWDLPIILVCENNHYGMGTAEWRAAKSPAYYKRGD--YVPGL 256 Query: 248 QVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP-ANYRTREEINE 303 +VDGMD AVK +A + + H GPII+EM TYRY GHSMSDP + YRTR+EI+ Sbjct: 257 KVDGMDAFAVK----QACKFAKEHALKSGPIILEMDTYRYHGHSMSDPGSTYRTRDEISG 312 Query: 304 MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +R DPIE++RK ++ + A+E +LK+IE VRK ++ ++ A+ P+P+EL++++ Sbjct: 313 VRQERDPIERIRKLIVTHDLATEKELKDIEKEVRKQVDEAIAQAKESPMPEPSELFTNV 371 >gi|146415272|ref|XP_001483606.1| hypothetical protein PGUG_04335 [Meyerozyma guilliermondii ATCC 6260] Length = 396 Score = 298 bits (763), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 156/334 (46%), Positives = 216/334 (64%), Gaps = 11/334 (3%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 +D+P LE FE KE L Y+ M++IRR E A LY + GFCHL +GQEA+ V Sbjct: 42 LDVPLLE-FET---EKETLLQMYKDMVVIRRMEMAADALYKAKKIRGFCHLSVGQEAIAV 97 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G++ ++T+ D +IT+YR HG G ++ EL G++ G+S GKGGSMHMF+ GF Sbjct: 98 GIENAITKQDSVITSYRCHGFAYVRGASVKAVLGELMGKRSGVSYGKGGSMHMFAP--GF 155 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 YGG+GIVGAQV LG G+AFA+KYR +GDGAANQGQV+E++N+A LW+L I+ Sbjct: 156 YGGNGIVGAQVPLGAGLAFAHKYRGEKNATFDLYGDGAANQGQVFEAYNMAKLWDLPCIF 215 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 ENN+Y MGTS SR+SA T++ KRG IPG++V+GMD+ A A + + G Sbjct: 216 ACENNKYGMGTSASRSSALTDYYKRGQY--IPGLKVNGMDVLACYQASKFAKDWAVSGNG 273 Query: 274 PIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P+++E TYRY GHSMSDP YRTREE+ MRS +DPI ++ LL ASE ++K Sbjct: 274 PLVLEYETYRYGGHSMSDPGTTYRTREEVQHMRSRNDPIAGLKATLLDLNVASEDEIKAW 333 Query: 333 EMNVRKIINNSVEFAQSDKEPDP--AELYSDILI 364 + + RK ++ V A++D P+ + L+ DI + Sbjct: 334 DKDARKYVDEQVAEAENDAPPEAKMSILFEDIYV 367 >gi|212538103|ref|XP_002149207.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Penicillium marneffei ATCC 18224] gi|210068949|gb|EEA23040.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Penicillium marneffei ATCC 18224] Length = 407 Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 159/347 (45%), Positives = 216/347 (62%), Gaps = 21/347 (6%) Query: 35 DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 D PF E FE E + K++ Y M+ IRR E A +LY + G Sbjct: 46 DKPFTVRLSDESFETYELDPPPYTLETTKKELKQMYYDMVAIRRMEMAADRLYKEKKIRG 105 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL +GQEAV VG++ ++T D++ITAYR HG L G I+ EL GR+ GI+ GK Sbjct: 106 FCHLSVGQEAVAVGIEHAITPQDKLITAYRCHGFALMRGGTVKSIIGELLGRREGIAYGK 165 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMF+ FYGG+GIVGAQV +G G+AFA +Y + +GDGA+NQGQV+E+ Sbjct: 166 GGSMHMFAPN--FYGGNGIVGAQVPVGAGLAFAQQYNGEKTCSIALYGDGASNQGQVFEA 223 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LWNL V++ ENN+Y MGTS +R+SA T++ KRG IPG++V+GMD+ A+KA Sbjct: 224 YNMAKLWNLPVLFGCENNKYGMGTSAARSSALTDYYKRGQ--YIPGIKVNGMDVLAIKAA 281 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 + Y + KGP++ E +TYRY GHSMSDP YR+REEI MRS HD I ++++LL Sbjct: 282 VQYGREYATSGKGPLVYEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTHDAIAGLKQKLL 341 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA--ELYSDILI 364 +E +LK I+ R I+ V A+ P+P LY DI + Sbjct: 342 DWSVVTEEELKAIDKEARAFIDEEVAVAEQMAPPEPTTRNLYEDIFV 388 >gi|85083464|ref|XP_957122.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial [Neurospora crassa OR74A] gi|28918208|gb|EAA27886.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial [Neurospora crassa OR74A] Length = 417 Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 160/373 (42%), Positives = 230/373 (61%), Gaps = 31/373 (8%) Query: 19 PSVSAKRAATSSVDCVDI----------PFL-----EGFEVSEFN---------KEQELS 54 PS++A+R+ T++ + PF E FE E + K++ Sbjct: 28 PSIAARRSVTTNAASAQLEKPLPESETEPFQVTLSDESFETYELDPPPYTLNVTKKELKQ 87 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y M+++R+ E A +LY + GFCHL +GQEAV VG++ ++ D +IT+YR HG Sbjct: 88 MYYDMVVVRQMEMAADRLYKEKKIRGFCHLSVGQEAVAVGIEHAIERADDVITSYRCHGF 147 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G I+ EL GR+GGI+ GKGGSMHMF+ GFYGG+GIVGAQV++G G+AFA+ Sbjct: 148 AYMRGGTVRSIIGELLGRRGGIAYGKGGSMHMFT--KGFYGGNGIVGAQVAVGAGLAFAH 205 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY ++ +GDGA+NQGQV+ESFN+A LWNL ++ ENN+Y MGTS +R+SA T+ Sbjct: 206 KYTGRKNASIILYGDGASNQGQVFESFNMAKLWNLPALFGCENNKYGMGTSAARSSALTD 265 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++V+GMD+ AVKA + + GP+++E +TYRY GHSMSDP Sbjct: 266 YYKRGQY--IPGLKVNGMDVLAVKAAVAYGKQWTNNDNGPLVLEYVTYRYGGHSMSDPGT 323 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTREEI MRS +DPI +++ +L ASE +LK ++ R +N V A++ P Sbjct: 324 TYRTREEIQRMRSTNDPIAGLKQHILEWGVASEEELKNLDKEARAYVNEEVAAAEAMPPP 383 Query: 354 DPAE--LYSDILI 364 + + L+ DI + Sbjct: 384 EANQQILFEDIYV 396 >gi|297850898|ref|XP_002893330.1| IAA-conjugate-resistant 4 [Arabidopsis lyrata subsp. lyrata] gi|297339172|gb|EFH69589.1| IAA-conjugate-resistant 4 [Arabidopsis lyrata subsp. lyrata] Length = 393 Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 150/323 (46%), Positives = 212/323 (65%), Gaps = 10/323 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E + E+ L+ +R M +RR E A LY ++ GFCHL GQEA+ VGM+ ++T D + Sbjct: 57 ETSSEEILAFFRDMARMRRMEIAADSLYKAKLIRGFCHLYDGQEALAVGMEAAITRKDAI 116 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YR+H + G +EL GR+ G S GKGGSMH + FYGGHGIVGAQ+ Sbjct: 117 ITSYRDHCTFIGRGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQIP 176 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ Sbjct: 177 LGCGLAFAQKYNKDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTA 236 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTY 282 R++ + KRG +PG++VDGMD AVK +A + + H GPII+EM TY Sbjct: 237 TWRSAKSPAYFKRGD--YVPGLKVDGMDALAVK----QACKFAKEHALKNGPIILEMDTY 290 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI+ +R DPIE+VRK LL + A+E +LK++E +RK ++ Sbjct: 291 RYHGHSMSDPGSTYRTRDEISGVRQVRDPIERVRKLLLSHDIATEKELKDMEKEIRKEVD 350 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 ++V A+ PD +EL++++ + Sbjct: 351 DAVAQAKESPVPDASELFTNMYV 373 >gi|195393042|ref|XP_002055163.1| GJ18943 [Drosophila virilis] gi|194149673|gb|EDW65364.1| GJ18943 [Drosophila virilis] Length = 548 Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 155/318 (48%), Positives = 211/318 (66%), Gaps = 6/318 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E ++E L Y+ M+ +RR E +G LY + GFCHL IGQEA+ VGM L + D + Sbjct: 68 ELSREDALKMYKQMVEVRRIEVTSGNLYKAKHIRGFCHLYIGQEAIAVGMCAVLRKKDSV 127 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG GV + ++ EL G +GG S+GKGGSMHM+S + FYGG+GIVGAQV Sbjct: 128 ITAYRAHGWSHLMGVPSLGLIGELVGVKGGCSRGKGGSMHMYS--DNFYGGNGIVGAQVP 185 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GI A+++R +C+ C+GDGAANQGQV+E+FN+A LW L I+V ENN Y MGT Sbjct: 186 LGAGIGLAHRFRGDGGVCITCYGDGAANQGQVHEAFNMAKLWCLPCIFVCENNHYGMGTH 245 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + R +A T+F RG IPG+ VDG + AV++ A+ Y + H GPI++EM TYR+ Sbjct: 246 MERHAALTDFYMRGQY--IPGLWVDGNQVLAVRSATQFAIDYVQKH-GPIVLEMYTYRFE 302 Query: 286 GHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP +YR+R+EI ++RS DPIE RK+++ A E +LK+I+ VRK I+ Sbjct: 303 GHSMSDPGTSYRSRDEIKKVRSERDPIESFRKQIIALCLADEEELKKIDTAVRKEIDGVS 362 Query: 345 EFAQSDKEPDPAELYSDI 362 + +D+E EL +DI Sbjct: 363 KKVLADREVGMEELVADI 380 >gi|15221692|ref|NP_173828.1| IAR4; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring) [Arabidopsis thaliana] gi|118573089|sp|Q8H1Y0|ODPA2_ARATH RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|13430606|gb|AAK25925.1|AF360215_1 putative pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|2829869|gb|AAC00577.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|15293169|gb|AAK93695.1| putative pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|21593680|gb|AAM65647.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|332192371|gb|AEE30492.1| pyruvate dehydrogenase E1 component subunit alpha-2 [Arabidopsis thaliana] Length = 393 Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 150/323 (46%), Positives = 213/323 (65%), Gaps = 10/323 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E + E+ L+ +R M +RR E A LY ++ GFCHL GQEA+ VGM+ ++T+ D + Sbjct: 57 ETSSEEILAFFRDMARMRRMEIAADSLYKAKLIRGFCHLYDGQEALAVGMEAAITKKDAI 116 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YR+H + G +EL GR+ G S GKGGSMH + FYGGHGIVGAQ+ Sbjct: 117 ITSYRDHCTFIGRGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQIP 176 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ Sbjct: 177 LGCGLAFAQKYNKDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTA 236 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTY 282 R++ + KRG +PG++VDGMD AVK +A + + H GPII+EM TY Sbjct: 237 TWRSAKSPAYFKRGD--YVPGLKVDGMDALAVK----QACKFAKEHALKNGPIILEMDTY 290 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI+ +R DPIE+VRK LL + A+E +LK++E +RK ++ Sbjct: 291 RYHGHSMSDPGSTYRTRDEISGVRQVRDPIERVRKLLLTHDIATEKELKDMEKEIRKEVD 350 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 ++V A+ PD +EL++++ + Sbjct: 351 DAVAQAKESPIPDASELFTNMYV 373 >gi|330752149|emb|CBL87109.1| pyruvate dehydrogenase E1 component, alpha subunit [uncultured Flavobacteria bacterium] Length = 331 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 144/319 (45%), Positives = 202/319 (63%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + KE L Y MLL R+FE+ + LY + GF HL GQEAV+ G +++ GD+M Sbjct: 5 KLTKEVYLKWYEDMLLWRKFEDMSAGLYIQQKIRGFLHLYNGQEAVLAGSILAMNPGDKM 64 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR H + GVD KIMAEL G+ G S+GKGGSMHMFS ++ FYGGHGIVG Q+ Sbjct: 65 ITAYRNHVQPIGLGVDPRKIMAELMGKVTGTSRGKGGSMHMFSKEHNFYGGHGIVGGQIP 124 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA+KY+ + + + GDGA QG ++E+FN+A LWNL V+++ ENN YAMGTS Sbjct: 125 LGAGLAFADKYKDDNHVTLTYMGDGAVRQGSLHETFNLAMLWNLPVVFICENNGYAMGTS 184 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R + + K G+ + +P VDGMD V A M +A+ R+ GP +E+ TYRY+ Sbjct: 185 VERTANHSEIWKLGLGYEMPCSAVDGMDPAVVYAAMQEAIDRARSGGGPTFLEIRTYRYK 244 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSD YRT+ E+ E + DPI V+K + KW+S +L+ + V+ ++ V+ Sbjct: 245 GHSMSDAQLYRTKNEVAEYQKV-DPISIVKKMIEKKKWSSPDELEAVNKRVKSLVAECVK 303 Query: 346 FAQSDKEPDPAELYSDILI 364 F + P+ EL+ D+ + Sbjct: 304 FGEDSPFPESHELWQDVYV 322 >gi|312217346|emb|CBX97294.1| hypothetical protein [Leptosphaeria maculans] Length = 499 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 157/337 (46%), Positives = 211/337 (62%), Gaps = 16/337 (4%) Query: 40 EGFEVSEFN---------KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEA 90 E FE E + K++ Y M+ +RR E A +LY + GFCHL GQEA Sbjct: 132 ESFETYELDPPAYTLNTTKKELKKMYYDMVAMRRMEMAADRLYKEKKIRGFCHLSTGQEA 191 Query: 91 VIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK 150 V VG++ ++ D +ITAYR HG L G I+ EL GR+ GI+ GKGGSMHMF+ Sbjct: 192 VAVGIEHAIERSDHVITAYRCHGFALMRGASVKSIIGELLGRREGIAYGKGGSMHMFAP- 250 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 GFYGG+GIVGAQV +G GIAFA +Y + + +GDGA+NQGQV+E++N+A LWNL Sbjct: 251 -GFYGGNGIVGAQVPVGAGIAFACQYENKKNVTLALYGDGASNQGQVFEAYNMAKLWNLP 309 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +I+ ENN+Y MGT+ +R+SA T + KRG IPG++++GMD+ AVKA + Y A Sbjct: 310 IIFGCENNKYGMGTAANRSSAITEYYKRGQY--IPGLKINGMDVLAVKAAVQYGKEYTAA 367 Query: 271 HKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 KGP++ E +TYRY GHSMSDP YRTREEI MRS DPI ++++LL SE +L Sbjct: 368 GKGPLVYEYVTYRYGGHSMSDPGTTYRTREEIQRMRSTQDPIAGLKQKLLDWGVTSEEEL 427 Query: 330 KEIEMNVRKIINNSVEFAQSDKEPDPAE--LYSDILI 364 K I+ R ++ V A+ PDP L+ DI + Sbjct: 428 KAIDKQARSEVDAEVAIAEKMPAPDPTPKVLFEDIYV 464 >gi|328856540|gb|EGG05661.1| hypothetical protein MELLADRAFT_36702 [Melampsora larici-populina 98AG31] Length = 457 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 157/337 (46%), Positives = 214/337 (63%), Gaps = 13/337 (3%) Query: 30 SVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQE 89 S C D P LE K + YRLM+ +RR E A LY ++ GFCHL IGQE Sbjct: 84 SYKC-DPPSLE----LPMTKSALVEMYRLMVTMRRMEMAADALYKQKLIRGFCHLAIGQE 138 Query: 90 AVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFST 149 AV VGM+ ++ D++ITAYR H + G ++AEL GRQ G+S GKGGSMH+F+ Sbjct: 139 AVSVGMETAIETEDKLITAYRCHPFAVLRGGTIKGVIAELLGRQDGMSSGKGGSMHIFT- 197 Query: 150 KNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK--ICVVCFGDGAANQGQVYESFNIAALW 207 F+GG+GIVGAQV +G G+A A KY D + +GDGA+NQGQV+E+FN+A LW Sbjct: 198 -KTFFGGNGIVGAQVPVGAGLALAQKYLDQDNKYATFIMYGDGASNQGQVFEAFNMAKLW 256 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 NL ++V ENN Y MGTS +R+S+ T + RG IPG+QV+GMD+ +V A + Sbjct: 257 NLPAVFVCENNLYGMGTSSARSSSNTKYFTRGD--QIPGLQVNGMDVLSVHNACKYAKEW 314 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASE 326 A KGP+++E +TYRY GHSMSDP YRTREEI MRS +DPI +R R+L E Sbjct: 315 TTAGKGPLLLEFITYRYGGHSMSDPGTTYRTREEIQHMRSTNDPISGLRNRILEAGVVEE 374 Query: 327 GDLKEIEMNVRKIINNSVEFAQSDKEPDPA-ELYSDI 362 +LK+I+ + ++ +VE A+ EPDP ++++D+ Sbjct: 375 AELKKIDKAAKIEVDQAVEEAKKSPEPDPTKDMWTDV 411 >gi|119196145|ref|XP_001248676.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Coccidioides immitis RS] Length = 404 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 168/374 (44%), Positives = 228/374 (60%), Gaps = 34/374 (9%) Query: 19 PSVSAKR-----AATSSVDCV----DIPFL-----EGFEVSEFN---------KEQELSA 55 PS A+R AA++ D V D PF E FE E + K++ Sbjct: 18 PSSVARRSVTTNAASAHADNVPAEDDKPFTIKLSDESFETYELDPPPYTLEVTKKELKQM 77 Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+ IRR E + +LY + GFCHL GQEAV VG++ +L D++ITAYR HG Sbjct: 78 YRDMVAIRRMEMASDRLYKEKKIRGFCHLSTGQEAVAVGIEHALDREDKLITAYRCHGFA 137 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 G I+ EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV +G G+AFA K Sbjct: 138 YMRGGTIKSIVGELLGRREGIAYGKGGSMHMFAP--GFYGGNGIVGAQVPVGAGLAFAQK 195 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y + +GDGA+NQGQV+E+FN+A LWNL VI+ ENN+Y MGT+ +RA+A T++ Sbjct: 196 YEGKQNTTICLYGDGASNQGQVFEAFNMAKLWNLPVIFGCENNKYGMGTAANRAAAMTDY 255 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-AN 294 KRG IPG++++GMD+ A+KA + Y A GP++ E +TYRY GHSMSDP Sbjct: 256 YKRGQY--IPGLKINGMDVLAIKAAVKYGREYTLAGHGPLVFEYVTYRYGGHSMSDPGTT 313 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRTREEI MRS +DPI ++ +LL +E +LK I+ R +++ V A+++K P Sbjct: 314 YRTREEIQRMRSTNDPIAGLKHKLLDWNVTTEEELKTIDKETRSFVDSEV--AEAEKMPV 371 Query: 355 PAE----LYSDILI 364 P L+ DI + Sbjct: 372 PDANSRILFEDIYV 385 >gi|195565107|ref|XP_002106147.1| GD16703 [Drosophila simulans] gi|194203519|gb|EDX17095.1| GD16703 [Drosophila simulans] Length = 476 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 163/335 (48%), Positives = 212/335 (63%), Gaps = 7/335 (2%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 ++ C D+ +V E ++E L+ Y ML +RRFE AG Y + GFCHL GQ Sbjct: 41 NTFKCYDLENGPTMDV-ELSREDALTMYTQMLELRRFETVAGNYYKERKIRGFCHLYNGQ 99 Query: 89 EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 EAV VGMK L D +ITAYR H GV +IMAEL G + G S+GKGGSMHM+S Sbjct: 100 EAVAVGMKQRLRSCDSVITAYRCHAWTYLMGVSLYEIMAELFGVRTGCSRGKGGSMHMYS 159 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 K FYGG+GIVGAQV LG GI A+ YR+ + + VV +GDGAANQGQ++ESFN+A LW Sbjct: 160 DK--FYGGNGIVGAQVPLGAGIGLAHSYRKDNGVSVVLYGDGAANQGQIFESFNMAKLWC 217 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L I+V ENN Y MGT V RASA T F RG IPG+ VDG + AV++ AV + Sbjct: 218 LPCIFVCENNHYGMGTHVKRASAMTEFYMRGQY--IPGLWVDGNQVLAVRSATQFAVEHA 275 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 H GPI++EM TYRY GHSMSDP +YR+REE+ R DPI R +++ A E Sbjct: 276 LKH-GPIVLEMSTYRYVGHSMSDPGTSYRSREEVQATREKRDPITSFRSQIIALCLADEE 334 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +LK ++ RK +++ + A +D+E + EL++DI Sbjct: 335 ELKALDDKTRKQVDSICKKATTDREVELDELHTDI 369 >gi|45201199|ref|NP_986769.1| AGR103Wp [Ashbya gossypii ATCC 10895] gi|44986053|gb|AAS54593.1| AGR103Wp [Ashbya gossypii ATCC 10895] Length = 408 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 153/334 (45%), Positives = 220/334 (65%), Gaps = 11/334 (3%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 +D+P L ++V++ N L Y+ M+++RR E LY + GFCHL +GQEA+ V Sbjct: 55 LDVPELT-YKVTKGNL---LQMYKDMIVVRRMEMACDALYKAKKIRGFCHLSVGQEAIAV 110 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G++ ++T+ D +IT+YR HG G ++AEL GR+ G+S GKGGSMHM++ +GF Sbjct: 111 GIENAITKRDTVITSYRCHGFTYMRGASVRAVLAELMGRRTGVSYGKGGSMHMYT--DGF 168 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 +GG+GIVGAQV LG G+AFA++Y+ D +GDGA+NQGQV+E+FN+A LWNL ++ Sbjct: 169 FGGNGIVGAQVPLGAGLAFAHQYKNEDVCAFALYGDGASNQGQVFEAFNMAKLWNLPAVF 228 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 ENN+Y MGT+ SR+SA T + KRG IPG++V+GMDI AV A +C + KG Sbjct: 229 ACENNKYGMGTAASRSSAMTEYFKRGQY--IPGLKVNGMDILAVYQASKFAKHWCVSGKG 286 Query: 274 PIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 PI++E TYRY GHSMSDP YRTR+EI MRS +DPI ++ +LL ASE ++K Sbjct: 287 PIVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMQLLDLGIASEEEIKAY 346 Query: 333 EMNVRKIINNSVEFAQSDKEPDP--AELYSDILI 364 + RK ++ VE A + P+ + L+ D+ + Sbjct: 347 DKAARKYVDEQVELADAAPAPEAKMSILFEDVYV 380 >gi|24639748|ref|NP_572182.1| CG7024 [Drosophila melanogaster] gi|7290527|gb|AAF45979.1| CG7024 [Drosophila melanogaster] gi|33636661|gb|AAQ23628.1| AT31065p [Drosophila melanogaster] Length = 479 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 163/335 (48%), Positives = 212/335 (63%), Gaps = 7/335 (2%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 ++ C D+ +V E ++E L+ Y ML +RRFE AG Y + GFCHL GQ Sbjct: 41 NTFKCYDLENGPTMDV-ELSREDALTMYTQMLELRRFETVAGNYYKERKIRGFCHLYNGQ 99 Query: 89 EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 EAV VGMK L D +ITAYR H GV +IMAEL G + G S+GKGGSMHM+S Sbjct: 100 EAVAVGMKQRLRSCDSVITAYRCHAWTYLMGVSLYEIMAELFGVRTGCSRGKGGSMHMYS 159 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 K FYGG+GIVGAQV LG GI A+ YR+ + + VV +GDGAANQGQ++ESFN+A LW Sbjct: 160 DK--FYGGNGIVGAQVPLGAGIGLAHSYRKDNGVSVVLYGDGAANQGQIFESFNMAKLWC 217 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L I+V ENN Y MGT V RASA T F RG IPG+ VDG + AV++ AV + Sbjct: 218 LPCIFVCENNHYGMGTHVKRASAMTEFYMRGQY--IPGLWVDGNQVLAVRSATQFAVDHA 275 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 H GPI++EM TYRY GHSMSDP +YR+REE+ R DPI R +++ A E Sbjct: 276 LKH-GPIVLEMSTYRYVGHSMSDPGTSYRSREEVQSTREKRDPITSFRSQIIALCLADEE 334 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +LK ++ RK +++ + A +D+E + EL++DI Sbjct: 335 ELKALDDKTRKQVDSICKKATTDREVELDELHTDI 369 >gi|24639746|ref|NP_726947.1| lethal (1) G0334, isoform B [Drosophila melanogaster] gi|7290526|gb|AAF45978.1| lethal (1) G0334, isoform B [Drosophila melanogaster] gi|33589540|gb|AAQ22537.1| LD13846p [Drosophila melanogaster] Length = 328 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 149/305 (48%), Positives = 205/305 (67%), Gaps = 6/305 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M IRR E AG LY ++ GFCHL GQEA VGMK ++ + D +I+AYR HG Sbjct: 1 MQTIRRLETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLM 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GV S ++AELTG QGG ++GKGGSMHM++ FYGG+GIVGAQV LG G+ A KY+ Sbjct: 61 GVSPSGVLAELTGVQGGCARGKGGSMHMYAPN--FYGGNGIVGAQVPLGAGVGLACKYKG 118 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + +C+ +GDGAANQGQV+E++N+A LW L VI+V ENN Y MGTS RAS T++ R Sbjct: 119 NGGMCLALYGDGAANQGQVFEAYNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTR 178 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRT 297 G + +PG+ VDGMD+ AV++ + A+ Y H GP+++E TYRY GHSMSDP +YRT Sbjct: 179 GDA--LPGIWVDGMDVLAVRSATEFAINYVNTH-GPLVMETNTYRYSGHSMSDPGTSYRT 235 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 REEI E+R DPI ++ + + ++K I++ VRK ++ + FA+SD E + Sbjct: 236 REEIQEVRQKRDPITSFKELCIELGLITTDEVKAIDLKVRKEVDEATAFAKSDAELGVSH 295 Query: 358 LYSDI 362 L++D+ Sbjct: 296 LWTDV 300 >gi|58269082|ref|XP_571697.1| pyruvate dehydrogenase e1 component alpha subunit, mitochondrial precursor [Cryptococcus neoformans var. neoformans JEC21] gi|134112674|ref|XP_774880.1| hypothetical protein CNBF0450 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257528|gb|EAL20233.1| hypothetical protein CNBF0450 [Cryptococcus neoformans var. neoformans B-3501A] gi|57227932|gb|AAW44390.1| pyruvate dehydrogenase e1 component alpha subunit, mitochondrial precursor, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 413 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 149/316 (47%), Positives = 207/316 (65%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 K++ ++ YR M+ +RR E+ A LY ++ GFCHL IGQEAV VGM+ ++T D++IT Sbjct: 77 TKDELINMYRTMVQMRRMEQAADALYKQKLIRGFCHLAIGQEAVSVGMETAITGQDRVIT 136 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR H + G ++AEL GR+ G+S GKGGSMH+F+ F+GG+GIVGAQV +G Sbjct: 137 SYRCHTFAVLRGGTIKGVIAELMGRKDGMSFGKGGSMHIFTPS--FFGGNGIVGAQVPVG 194 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+A A KY + +GDGAANQGQV+E+FN+A LWNL ++V ENN+Y MGTS Sbjct: 195 AGVALAQKYNKEKAATFALYGDGAANQGQVFEAFNMAKLWNLPCVFVCENNKYGMGTSAE 254 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R+S T F RG IPG+QV+GMDI AV+ A + + KGP+++E +TYRY GH Sbjct: 255 RSSMNTQFFTRGD--QIPGLQVNGMDILAVREATKWAREWATSGKGPLLVEFVTYRYGGH 312 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP YRTREE+ +MRS+ D I ++K +L E LK I+ ++ ++ +VE Sbjct: 313 SMSDPGTTYRTREEVQQMRSSQDAIAGLKKYILEWGATDEASLKAIDKAAKEEVDAAVEE 372 Query: 347 AQSDKEPDPAELYSDI 362 A+ PD E +SDI Sbjct: 373 AKQSPFPDQVEFWSDI 388 >gi|302758680|ref|XP_002962763.1| hypothetical protein SELMODRAFT_404036 [Selaginella moellendorffii] gi|300169624|gb|EFJ36226.1| hypothetical protein SELMODRAFT_404036 [Selaginella moellendorffii] Length = 410 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 156/342 (45%), Positives = 221/342 (64%), Gaps = 17/342 (4%) Query: 34 VDIPF-LEGFEVSEFNKEQELSA------YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI 86 VDIP G + E SA +++M ++RR E A LY + GFCHL Sbjct: 55 VDIPVPYAGHRCDPPEQRVETSAKELVDFFKVMYVMRRMEIAADSLYKAKFIRGFCHLYD 114 Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 GQEAV VGM+ +LT+ D +ITAYR+H + G ++MAEL GR+ G S GKGGSMHM Sbjct: 115 GQEAVCVGMEAALTKEDAIITAYRDHCTHIGRGGTVLEVMAELMGRKSGCSLGKGGSMHM 174 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 ++ + FYGG+GIVGAQ +LG G+AFA KY + + + + +GDGAANQGQ++E+ NI+AL Sbjct: 175 YNKEGNFYGGNGIVGAQTALGAGLAFAQKYNKQNAVSLALYGDGAANQGQLFEAMNISAL 234 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 W+L VI+V ENN Y MGT+ R++ + KRG +PG+++DGMD+ AVK + V Sbjct: 235 WDLPVIFVCENNHYGMGTAEWRSAKSPEYYKRGDY--VPGLKIDGMDVLAVK----QGVR 288 Query: 267 YCRAH---KGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 + + H KGPI++EM TYRY GHSMSDP + YRTREEI+ +R DPIE+VRK LL + Sbjct: 289 FAKEHALTKGPIVLEMDTYRYHGHSMSDPGSTYRTREEISGVRQERDPIERVRKLLLAKE 348 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 + DLK +E + ++ +V A+ +P+ EL++ + + Sbjct: 349 IVTVADLKNLEKQAKAEVDEAVNQAKEGGQPETHELFTHVHV 390 >gi|242004222|ref|XP_002436278.1| pyruvate dehydrogenase, putative [Ixodes scapularis] gi|215499614|gb|EEC09108.1| pyruvate dehydrogenase, putative [Ixodes scapularis] Length = 393 Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 151/318 (47%), Positives = 215/318 (67%), Gaps = 8/318 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++E L+ YR M IRR E A LY ++ GFCHL GQEA VGM+ L +GD +IT Sbjct: 55 SREDALTLYRQMFAIRRMEGTANSLYKAKIIRGFCHLYSGQEACAVGMQAVLEKGDSVIT 114 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG GV + ++AELTGR G ++GKGGSMH++ +GF+GG+GIVGAQV LG Sbjct: 115 AYRAHGWAYLRGVSMTGVLAELTGRDAGCARGKGGSMHLYC--DGFFGGNGIVGAQVPLG 172 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIA +KY+ +D++C+ +GDGAANQGQV+E++N+A LW+L ++V ENN +AMGTS Sbjct: 173 AGIALGHKYQGTDRVCLTLYGDGAANQGQVFEAYNMAKLWDLPCVFVCENNGFAMGTSAE 232 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R +A T++ RG IPG+ VDGMD+ AV+ AV CR KGP+++E+ TYRY GH Sbjct: 233 RGAASTDYYTRGD--YIPGIWVDGMDVLAVREASRFAVDMCRKGKGPVVMEVATYRYHGH 290 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YRTREEI E+R DPI + +++ + + +E++ V++ ++ + E Sbjct: 291 SMSDPGTSYRTREEIQEVRQTRDPITSFKDKIITAELVTS---EELKAKVKQEVDAAGEA 347 Query: 347 AQSDKEPDPAELYSDILI 364 A++ KE +E+Y DI + Sbjct: 348 AKAGKEVPLSEMYGDIYV 365 >gi|303321918|ref|XP_003070953.1| Pyruvate dehydrogenase E1 component alpha subunit, putative [Coccidioides posadasii C735 delta SOWgp] gi|240110650|gb|EER28808.1| Pyruvate dehydrogenase E1 component alpha subunit, putative [Coccidioides posadasii C735 delta SOWgp] gi|320040474|gb|EFW22407.1| pyruvate dehydrogenase E1 component alpha subunit [Coccidioides posadasii str. Silveira] Length = 404 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 168/374 (44%), Positives = 228/374 (60%), Gaps = 34/374 (9%) Query: 19 PSVSAKR-----AATSSVDCV----DIPFL-----EGFEVSEFN---------KEQELSA 55 PS A+R AA++ D V D PF E FE E + K++ Sbjct: 18 PSSLARRSVTTNAASAHADNVPAEDDKPFTIKLSDESFETYELDPPPYTLEVTKKELKQM 77 Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+ IRR E + +LY + GFCHL GQEAV VG++ +L D++ITAYR HG Sbjct: 78 YRDMVAIRRMEMASDRLYKEKKIRGFCHLSTGQEAVAVGIEHALDREDKLITAYRCHGFA 137 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 G I+ EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV +G G+AFA K Sbjct: 138 YMRGGTIKSIVGELLGRREGIAYGKGGSMHMFAP--GFYGGNGIVGAQVPVGAGLAFAQK 195 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y + +GDGA+NQGQV+E+FN+A LWNL VI+ ENN+Y MGT+ +RA+A T++ Sbjct: 196 YEGKQNTTICLYGDGASNQGQVFEAFNMAKLWNLPVIFGCENNKYGMGTAANRAAAMTDY 255 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-AN 294 KRG IPG++++GMD+ A+KA + Y A GP++ E +TYRY GHSMSDP Sbjct: 256 YKRGQY--IPGLKINGMDVLAIKAAVKYGREYTLAGHGPLVFEYVTYRYGGHSMSDPGTT 313 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRTREEI MRS +DPI ++ +LL +E +LK I+ R +++ V A+++K P Sbjct: 314 YRTREEIQRMRSTNDPIAGLKHKLLDWNVTTEEELKTIDKETRSFVDSEV--AEAEKMPV 371 Query: 355 PAE----LYSDILI 364 P L+ DI + Sbjct: 372 PDANSRILFEDIYV 385 >gi|296413130|ref|XP_002836269.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630082|emb|CAZ80460.1| unnamed protein product [Tuber melanosporum] Length = 401 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 154/317 (48%), Positives = 210/317 (66%), Gaps = 18/317 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M+ IRR E A +LY + GFCHL GQEAV G++ ++T DQ+ITAYR HG Sbjct: 74 YSDMVTIRRMEMAADKLYKEKKIRGFCHLSTGQEAVAAGVEHAITPDDQVITAYRCHGFA 133 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G I+AEL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV +G GI FA K Sbjct: 134 LMRGASVKSIIAELLGRREGIAYGKGGSMHMFT--KGFYGGNGIVGAQVPVGAGIGFAMK 191 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y +GDGA+NQGQV+E++N+A LW++ V++ ENN+Y MGTS +R+SA T++ Sbjct: 192 YLGRPNTTFALYGDGASNQGQVFEAYNMAKLWDIPVVFACENNKYGMGTSANRSSALTDY 251 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH----KGPIIIEMLTYRYRGHSMSD 291 KRG IPG++V+GMD+ AVK +A AY + H KGP+++E +TYRY GHSMSD Sbjct: 252 YKRGQ--YIPGLKVNGMDVLAVK----QASAYAKEHTISGKGPMVMEFVTYRYGGHSMSD 305 Query: 292 P-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWA-SEGDLKEIEMNVRKIINNSVEFAQS 349 P YRTREE+ MRS DPI+ +++++L +W SE +LK +E + ++ V+ A+ Sbjct: 306 PGTTYRTREEVQRMRSTQDPIQGLKQKIL--EWGISEDELKALEKEAKASVDEEVKKAEE 363 Query: 350 DKEPDPAE--LYSDILI 364 PDP L+ DI + Sbjct: 364 APVPDPTSKTLFEDIYV 380 >gi|255729020|ref|XP_002549435.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240132504|gb|EER32061.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 401 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 156/338 (46%), Positives = 212/338 (62%), Gaps = 15/338 (4%) Query: 18 NPSVSAKRAATSSVDCVDIPF----LEGFEVS------EFNKEQELSAYRLMLLIRRFEE 67 N V+ + A ++ D V I EG+ + E KE L Y+ M++IRR E Sbjct: 17 NMLVARRSMAKAASDLVSIELPESSFEGYNLEVPSLSFETEKENLLKMYKDMIVIRRMEM 76 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 A LY + GFCHL +GQEA+ VG++ ++T D +IT+YR HG G I+A Sbjct: 77 AADALYKAKKIRGFCHLSVGQEAIAVGIENAITPTDTVITSYRCHGFAHMRGASVKSILA 136 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 EL GR+ GI+ GKGGSMHMF+ NGFYGG+GIVGAQV LG G+AF++KYR +C + Sbjct: 137 ELMGRRSGIAHGKGGSMHMFT--NGFYGGNGIVGAQVPLGAGLAFSHKYRGDKDVCFDLY 194 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGA+NQGQV+ESFN+A LWNL VI+ ENN+Y MGT+ +R+SA T + KRG IPG+ Sbjct: 195 GDGASNQGQVFESFNMAKLWNLPVIFCCENNKYGMGTAAARSSAMTEYYKRGQY--IPGL 252 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRS 306 +++GMD+ A A + GP+++E TYRY GHSMSDP YRTREE+ MRS Sbjct: 253 KINGMDVLACYQASKFAKDWASQGNGPLVLEYETYRYGGHSMSDPGTTYRTREEVQHMRS 312 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +DPI ++ LL A+E ++K + RK ++ V Sbjct: 313 RNDPIAGLKAVLLEKDIATEDEIKSYDKAARKYVDEQV 350 >gi|195163423|ref|XP_002022549.1| GL13094 [Drosophila persimilis] gi|194104541|gb|EDW26584.1| GL13094 [Drosophila persimilis] Length = 399 Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 150/318 (47%), Positives = 209/318 (65%), Gaps = 6/318 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K++ L Y M IRR E AG LY ++ GFCHL GQEA VGMK ++ + D + Sbjct: 59 KLTKDEALKYYTQMQTIRRIETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNI 118 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 I+AYR HG GV ++AELTG Q G ++GKGGSMHM++ F+GG+GIVGAQV Sbjct: 119 ISAYRVHGWTYLMGVSPIGVLAELTGAQSGCARGKGGSMHMYAPN--FFGGNGIVGAQVP 176 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTG+ A KY+ + +C+ +GDGAANQGQV+E++N+A LW L VI+V ENN Y MGTS Sbjct: 177 LGTGVGLACKYKGNGGMCLALYGDGAANQGQVFEAYNMAYLWKLPVIFVCENNNYGMGTS 236 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RAS T++ RG + +PG+ VDGMD+ AV++ + A+ Y GP+++E TYRY Sbjct: 237 SERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSATEFAINYVNT-VGPLVMETNTYRYS 293 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP +YRTREEI E+R DPI ++ + + ++K I++ VRK I+ + Sbjct: 294 GHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCIELGLITTDEVKAIDLKVRKEIDEAT 353 Query: 345 EFAQSDKEPDPAELYSDI 362 FA+SD E + L++D+ Sbjct: 354 AFAKSDAELAVSHLWTDV 371 >gi|125983744|ref|XP_001355637.1| GA20028 [Drosophila pseudoobscura pseudoobscura] gi|54643953|gb|EAL32696.1| GA20028 [Drosophila pseudoobscura pseudoobscura] Length = 399 Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 150/318 (47%), Positives = 209/318 (65%), Gaps = 6/318 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K++ L Y M IRR E AG LY ++ GFCHL GQEA VGMK ++ + D + Sbjct: 59 KLTKDEALKYYTQMQTIRRIETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNI 118 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 I+AYR HG GV ++AELTG Q G ++GKGGSMHM++ F+GG+GIVGAQV Sbjct: 119 ISAYRVHGWTYLMGVSPIGVLAELTGAQSGCARGKGGSMHMYAPN--FFGGNGIVGAQVP 176 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTG+ A KY+ + +C+ +GDGAANQGQV+E++N+A LW L VI+V ENN Y MGTS Sbjct: 177 LGTGVGLACKYKGNGGMCLALYGDGAANQGQVFEAYNMAYLWKLPVIFVCENNNYGMGTS 236 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RAS T++ RG + +PG+ VDGMD+ AV++ + A+ Y GP+++E TYRY Sbjct: 237 SERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSATEFAINYVNT-VGPLVMETNTYRYS 293 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP +YRTREEI E+R DPI ++ + + ++K I++ VRK I+ + Sbjct: 294 GHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCIELGLITTDEVKAIDLKVRKEIDEAT 353 Query: 345 EFAQSDKEPDPAELYSDI 362 FA+SD E + L++D+ Sbjct: 354 AFAKSDAELAVSHLWTDV 371 >gi|255089689|ref|XP_002506766.1| predicted protein [Micromonas sp. RCC299] gi|226522039|gb|ACO68024.1| predicted protein [Micromonas sp. RCC299] Length = 362 Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 146/321 (45%), Positives = 212/321 (66%), Gaps = 3/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 ++ E +K + + + L+RR E + LY + GFCHL GQEAV VGM+ +LT+ Sbjct: 19 QMVETSKTEIVDMFTQAYLMRRLEIASDVLYKGKFIRGFCHLYDGQEAVCVGMEAALTKE 78 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D ++T+YR+H L G ++MAEL GR G SKG GGSMHM+ F+GG+GIVGA Sbjct: 79 DAIVTSYRDHCTHLGRGGTPLEVMAELMGRVDGASKGMGGSMHMYKRDANFFGGNGIVGA 138 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q +G G+AF+ KY + + V +GDGAANQGQ++E+ NIAALW+L +IYV ENN Y M Sbjct: 139 QTPIGAGLAFSYKYNKQPNVAVAMYGDGAANQGQLFEALNIAALWDLPLIYVCENNHYGM 198 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GT+ +R++ + KRG +PG++VDGMD AVK + A A+C + GPI++EM TY Sbjct: 199 GTTTARSAKSPEYYKRGDY--VPGLRVDGMDALAVKQAIKFAKAHCVSGAGPIVLEMDTY 256 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI +R DP+E++RK + H++ + ++K IE RKI++ Sbjct: 257 RYHGHSMSDPGSTYRTRDEITGIRQERDPVERLRKLIQHHELLAPEEIKAIEKTQRKIVD 316 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 ++V ++ EPD L+ ++ Sbjct: 317 DAVAAGKASPEPDSNALFRNM 337 >gi|54289533|gb|AAV32073.1| pyruvate dehydrogenase E1 alpha subunit [Nyctotherus ovalis] Length = 381 Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 160/352 (45%), Positives = 226/352 (64%), Gaps = 14/352 (3%) Query: 22 SAKRAATSSVDCVDIPFLEGFEVSE--------FNKEQELSAYRLMLLIRRFEEKAGQLY 73 SA R A S+V+ V +P E F + + +++ L Y M RR E ++Y Sbjct: 14 SAARFA-STVE-VKLPQYEVFNLDKSVLPTKATTTRDELLKYYHEMNFQRRVEIMCDEIY 71 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQ 133 V GFCHL GQEAV VG++ +T+ D +ITAYR HG +L G A++++AE+ G+ Sbjct: 72 KKKEVRGFCHLMDGQEAVSVGVEAGITKEDHIITAYRCHGMLLGRGETAARLIAEMMGKA 131 Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 G SKGKGGSMHM KN FYGG+GIVGA + +GTGIAF Y + ++CV +GDGAAN Sbjct: 132 TGASKGKGGSMHMSLRKNKFYGGNGIVGAHIPVGTGIAFGINYDKKKEVCVTMYGDGAAN 191 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 QGQ+YE+ N+A LW L +IY+ ENN YAMGT+ +RA+ T + + IPG++ DGM+ Sbjct: 192 QGQLYEAANMALLWKLPIIYLCENNLYAMGTACARATPNTKYYTKLAP--IPGIKGDGMN 249 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 + AV+ + A +C + KGPI +E+ TYRY GHSMSDP +YR+REEI ++R DPI Sbjct: 250 LFAVREVIKFAREWCLSGKGPICLELETYRYHGHSMSDPGLSYRSREEIAQVRKERDPIA 309 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP-AELYSDIL 363 +V++ +L NK A+E +LKEIE RK + + A+ PDP +L +D++ Sbjct: 310 KVKQVILDNKVATEDELKEIERETRKTVEDVTVQAREASWPDPEKDLLTDVM 361 >gi|313207225|ref|YP_004046402.1| pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit [Riemerella anatipestifer DSM 15868] gi|312446541|gb|ADQ82896.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Riemerella anatipestifer DSM 15868] gi|315022973|gb|EFT35994.1| Pyruvate dehydrogenase E1 component alpha subunit [Riemerella anatipestifer RA-YM] gi|325335328|gb|ADZ11602.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Riemerella anatipestifer RA-GD] Length = 333 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 154/320 (48%), Positives = 204/320 (63%), Gaps = 8/320 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK--MSLTE 101 + EF+KE L Y M + RRFE+K LY + GF HL GQEA+ G M LT+ Sbjct: 1 MKEFSKEVYLKWYEDMTMWRRFEDKCRSLYLKQKIRGFLHLYNGQEAIPAGFTHAMDLTK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D MITAYR H H +A GVD +IMAEL G+ G S+G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 -DSMITAYRCHIHPMAMGVDPKRIMAELCGKATGTSQGMGGSMHIFSKEHRFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 Q+ LG GIAFA+KY R++ IC + GDGA QG ++E+FN+A W L V++V ENNQ Sbjct: 120 GQIPLGAGIAFADKYFDRKAVNICFM--GDGAVRQGSLHETFNMAMNWKLPVVFVCENNQ 177 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTSV R + + K G+ + +P + VD MD V +A+ R GP IE Sbjct: 178 YAMGTSVKRTANHEDIYKLGLGYEMPCLPVDAMDPEKVAEAAFEAIERARRGDGPTFIEA 237 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSD YRT+EE+ + DPIE V++R+L NKWA+E +L++++ N R Sbjct: 238 RTYRYRGHSMSDAEPYRTKEEVA-IHKEQDPIELVKQRILDNKWATEAELEQLDENSRAF 296 Query: 340 INNSVEFAQSDKEPDPAELY 359 + VEF ++ PD ++Y Sbjct: 297 VEECVEFMENSPFPDAEKVY 316 >gi|302337124|ref|YP_003802330.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Spirochaeta smaragdinae DSM 11293] gi|301634309|gb|ADK79736.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Spirochaeta smaragdinae DSM 11293] Length = 318 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 147/317 (46%), Positives = 203/317 (64%), Gaps = 3/317 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMI 106 + +Q+ + Y+ MLLIRRFEEKA Q+YG+ +GGFCHL IGQEAV G +L + D ++ Sbjct: 3 DTKQKTALYKKMLLIRRFEEKAAQMYGLRKIGGFCHLYIGQEAVATGAIGALDLKSDYIV 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 AYR+HGH LA G+D +MAEL G+ G SKGKGGSMHMF + +GG+GIVG+Q+ + Sbjct: 63 AAYRDHGHALASGMDPKAVMAELYGKVTGCSKGKGGSMHMFDIEKHMFGGNGIVGSQIPV 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 TG+ +YR D + + FGDGA +QG +ES N+A ++ L V+Y+ ENNQY MGT Sbjct: 123 ATGVGLKIRYREEDGVVLCFFGDGAIHQGAFHESLNLAKIYGLPVVYICENNQYGMGTDF 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R SA +FS S+ I G Q+DGMD+ V + + V R P ++E+ TYRY+G Sbjct: 183 RRVSAVDDFSVMASSYGIEGRQIDGMDVITVHENVKELVEKARKEHMPSLLEIKTYRYKG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTREE+ + + DPI ++K LL + DL+ + +K+ + F Sbjct: 243 HSMSDPAKYRTREELEDYKER-DPILILKKGLLED-GVQASDLEAWDKEAKKLSEEAASF 300 Query: 347 AQSDKEPDPAELYSDIL 363 A+ EP+ LYSDIL Sbjct: 301 AEESPEPEIEALYSDIL 317 >gi|195340761|ref|XP_002036981.1| GM12362 [Drosophila sechellia] gi|194131097|gb|EDW53140.1| GM12362 [Drosophila sechellia] Length = 475 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 162/335 (48%), Positives = 212/335 (63%), Gaps = 7/335 (2%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 ++ C D+ +V E ++E L+ Y ML +RRFE AG Y + GFCHL GQ Sbjct: 40 NTFKCYDLENGPTMDV-ELSREDALTMYTQMLELRRFETVAGNYYKERKIRGFCHLYNGQ 98 Query: 89 EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 EAV VGMK L D +ITAYR H GV +I+AEL G + G S+GKGGSMHM+S Sbjct: 99 EAVAVGMKQRLRSCDSVITAYRCHAWTYLMGVSLYEIIAELFGVRTGCSRGKGGSMHMYS 158 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 K FYGG+GIVGAQV LG GI A+ YR+ + + VV +GDGAANQGQ++ESFN+A LW Sbjct: 159 DK--FYGGNGIVGAQVPLGAGIGLAHSYRKDNGVSVVLYGDGAANQGQIFESFNMAKLWC 216 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L I+V ENN Y MGT V RASA T F RG IPG+ VDG + AV++ AV + Sbjct: 217 LPCIFVCENNHYGMGTHVKRASAMTEFYMRGQY--IPGLWVDGNQVLAVRSATQFAVEHA 274 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 H GPI++EM TYRY GHSMSDP +YR+REE+ R DPI R +++ A E Sbjct: 275 LKH-GPIVLEMSTYRYVGHSMSDPGTSYRSREEVQATREKRDPITSFRSQIIALCLADEE 333 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +LK ++ RK +++ + A +D+E + EL++DI Sbjct: 334 ELKALDDKTRKQVDSICKKATTDREVELDELHTDI 368 >gi|50426983|ref|XP_462096.1| DEHA2G12870p [Debaryomyces hansenii CBS767] gi|49657766|emb|CAG90582.1| DEHA2G12870p [Debaryomyces hansenii] Length = 398 Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 160/365 (43%), Positives = 226/365 (61%), Gaps = 18/365 (4%) Query: 14 KMALNPSVSAKRA-ATSSVDCVDIPF----LEGF--EVSEFNKEQE----LSAYRLMLLI 62 ++A V +R A++S D V I EG+ E+ E + E E L Y+ M++I Sbjct: 9 QLARGAGVMGRRTMASASSDLVSIKLPESSFEGYNLEIPELSFETEKDTLLQMYKDMIII 68 Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR E + LY + GFCHL IGQEAV VG++ ++ + D +IT+YR HG G Sbjct: 69 RRMEMASDALYKAKKIRGFCHLSIGQEAVAVGIEAAINKKDSVITSYRCHGFTYMRGASV 128 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 +++ EL G++ G+S GKGGSMHM++ GFYGG+GIVGAQV LG G+AFA+KYR Sbjct: 129 KEVLGELMGKRSGVSYGKGGSMHMYA--QGFYGGNGIVGAQVPLGAGLAFAHKYRGEGNC 186 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 +GDGA+NQGQV+ES+N+A LW+L ++ ENN+Y MGTS SR+SA T + KRG Sbjct: 187 TFNLYGDGASNQGQVFESYNMAKLWDLPCVFACENNKYGMGTSASRSSAMTEYYKRGQY- 245 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEI 301 IPG++V+GMDI A A +C + GP+++E TYRY GHSMSDP YRTREE+ Sbjct: 246 -IPGLKVNGMDILACYQASKFAKDWCTSGNGPLVLEYETYRYGGHSMSDPGTTYRTREEV 304 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE--LY 359 MRS +DPI ++ LL A+E ++K + RK ++ V A++D P+ L+ Sbjct: 305 QHMRSRNDPIAGLKATLLELDIATEEEIKSYDKAARKYVDEQVAEAEADAPPEAKMDILF 364 Query: 360 SDILI 364 D+ + Sbjct: 365 EDVYV 369 >gi|194888398|ref|XP_001976910.1| GG18723 [Drosophila erecta] gi|190648559|gb|EDV45837.1| GG18723 [Drosophila erecta] Length = 480 Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 163/335 (48%), Positives = 212/335 (63%), Gaps = 7/335 (2%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 ++ C D+ +V E +K+ LS Y ML RRFE AG Y + GFCHL GQ Sbjct: 41 NTFKCYDLENGPTMDV-ELSKDDALSMYTQMLECRRFETVAGNYYKERKIRGFCHLYNGQ 99 Query: 89 EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 EAV VGMK L D +ITAYR H GV +IMAEL G + G S+GKGGSMHM+ Sbjct: 100 EAVAVGMKQRLRSCDSVITAYRCHAWTYLMGVSLHEIMAELFGVKTGCSRGKGGSMHMYG 159 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 + FYGG+GIVGAQV LG GIA A+ YR+ + + VV +GDGAANQGQV+ES+N+A LW Sbjct: 160 DR--FYGGNGIVGAQVPLGAGIALAHSYRKDNGVAVVLYGDGAANQGQVFESYNMAKLWC 217 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L I+V ENN Y MGT V RASA + F RG IPG+ VDG + AV++ AV + Sbjct: 218 LPCIFVCENNHYGMGTHVRRASAMSEFYMRGQY--IPGLWVDGNQVLAVRSATQFAVEHA 275 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 H GPI++EM TYRY GHSMSDP +YR+REE+ + R DPI R +++ A E Sbjct: 276 LNH-GPIVLEMSTYRYVGHSMSDPGTSYRSREEVQKAREKRDPITSFRSQIIALCLADEE 334 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +LK +E +K +++ + A +DKE + EL++DI Sbjct: 335 ELKALEDKTKKQVDSICKKASTDKEVELHELHTDI 369 >gi|68481122|ref|XP_715476.1| hypothetical protein CaO19.10609 [Candida albicans SC5314] gi|68481263|ref|XP_715406.1| hypothetical protein CaO19.3097 [Candida albicans SC5314] gi|46437028|gb|EAK96381.1| hypothetical protein CaO19.3097 [Candida albicans SC5314] gi|46437100|gb|EAK96452.1| hypothetical protein CaO19.10609 [Candida albicans SC5314] gi|238881185|gb|EEQ44823.1| pyruvate dehydrogenase E1 component [Candida albicans WO-1] Length = 401 Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 153/334 (45%), Positives = 213/334 (63%), Gaps = 16/334 (4%) Query: 23 AKRA---ATSSVDCVDIPF--LEGFEVS------EFNKEQELSAYRLMLLIRRFEEKAGQ 71 AKR+ A S + +++P EG+ + E KE L Y+ M++IRR E A Sbjct: 21 AKRSMAKAASDLVTIELPASSYEGYNLEVPALSFETEKETLLKMYKDMIIIRRMEMAADA 80 Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTG 131 LY + GFCHL +GQEA+ VG++ ++T D +IT+YR HG G ++AEL G Sbjct: 81 LYKSKKIRGFCHLSVGQEAIAVGIENAITPTDTVITSYRCHGFAFMRGASVKSVLAELMG 140 Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 R+ GI+ GKGGSMHMF+ NGFYGG+GIVGAQV LG G+AF++KY+ + +GDGA Sbjct: 141 RRSGIANGKGGSMHMFT--NGFYGGNGIVGAQVPLGAGLAFSHKYKNDKAVTFDLYGDGA 198 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 +NQGQV+E++N+A LWNL VI+ ENN+Y MGTS +R+SA T + KRG IPG++++G Sbjct: 199 SNQGQVFEAYNMAKLWNLPVIFACENNKYGMGTSAARSSAMTEYYKRGQY--IPGLKING 256 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDP 310 MD+ A A + GP+++E TYRY GHSMSDP YRTREE+ MRS +DP Sbjct: 257 MDVLATYQASKFAKDWASQGNGPLVLEYETYRYGGHSMSDPGTTYRTREEVQHMRSRNDP 316 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 I ++ LL + ASE ++K + RK ++ V Sbjct: 317 IAGLKAVLLEKEIASEDEIKSYDKAARKYVDEQV 350 >gi|241955154|ref|XP_002420298.1| E1 alpha subunit of the pyruvate dehydrogenase complex, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223643639|emb|CAX42522.1| E1 alpha subunit of the pyruvate dehydrogenase complex, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 401 Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 153/334 (45%), Positives = 212/334 (63%), Gaps = 16/334 (4%) Query: 23 AKRA---ATSSVDCVDIP--FLEGFEVS------EFNKEQELSAYRLMLLIRRFEEKAGQ 71 AKR+ A S + +++P EG+ + E KE L Y+ M++IRR E A Sbjct: 21 AKRSMAKAASDLVTIELPPTSFEGYNLEVPGLSFETEKETLLKMYKDMIIIRRMEMAADA 80 Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTG 131 LY + GFCHL +GQEA+ VG++ ++T D +IT+YR HG G ++AEL G Sbjct: 81 LYKSKKIRGFCHLSVGQEAIAVGIENAITPTDTVITSYRCHGFAFMRGASVKSVLAELMG 140 Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 R+ GI+ GKGGSMHMF+ NGFYGG+GIVGAQV LG G+AF++KY+ + +GDGA Sbjct: 141 RRSGIAHGKGGSMHMFT--NGFYGGNGIVGAQVPLGAGLAFSHKYKNDKAVTFDLYGDGA 198 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 +NQGQV+E++N+A LWNL VI+ ENN+Y MGTS +R+SA T + KRG IPG++++G Sbjct: 199 SNQGQVFEAYNMAKLWNLPVIFACENNKYGMGTSAARSSAMTEYYKRGQY--IPGLKING 256 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDP 310 MD+ A A + GP+++E TYRY GHSMSDP YRTREE+ MRS +DP Sbjct: 257 MDVLATYQASKFAKDWASQGNGPLVLEYETYRYGGHSMSDPGTTYRTREEVQHMRSRNDP 316 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 I ++ LL ASE ++K + RK ++ V Sbjct: 317 IAGLKAVLLEKDIASEDEIKSYDKAARKYVDEQV 350 >gi|39976937|ref|XP_369856.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|145016222|gb|EDK00712.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 416 Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 155/347 (44%), Positives = 218/347 (62%), Gaps = 21/347 (6%) Query: 35 DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 D PF E FE E + K+ Y M+++R+ E A +LY + G Sbjct: 51 DEPFTVNLSDESFETYELDPPPYTLDVTKKDLKQMYYDMVVVRQMEMAADRLYKEKKIRG 110 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEAV VG++ ++ + D +IT+YR HG G I+ EL GR+ GI+ GK Sbjct: 111 FCHLSTGQEAVAVGIEHAINKSDDVITSYRCHGFAYMRGGTVRSIIGELLGRREGIAYGK 170 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMF+ GFYGG+GIVGAQV +G G+AFA KY K ++ +GDGA+NQGQV+E+ Sbjct: 171 GGSMHMFA--KGFYGGNGIVGAQVPVGAGLAFAQKYTGGKKASIILYGDGASNQGQVFEA 228 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A LWNL ++ ENN+Y MGTS SR+SA T++ KRG IPG++V+GMD AVKA Sbjct: 229 FNMAKLWNLPALFGCENNKYGMGTSASRSSALTDYYKRGQY--IPGLKVNGMDALAVKAA 286 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 + + + GP+++E +TYRY GHSMSDP YRTREEI MRS +DPI ++++++ Sbjct: 287 VKYGKEWTESGNGPLVLEYVTYRYGGHSMSDPGTTYRTREEIQRMRSTNDPIAGLKQKMM 346 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE--LYSDILI 364 +E +LK ++ R +N V+ A++ P+P + LY DI + Sbjct: 347 DWDVVTEEELKSLDKKARSFVNEEVKAAEAMVPPEPTQQILYEDIYV 393 >gi|242807555|ref|XP_002484980.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Talaromyces stipitatus ATCC 10500] gi|218715605|gb|EED15027.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Talaromyces stipitatus ATCC 10500] Length = 407 Score = 295 bits (754), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 158/347 (45%), Positives = 216/347 (62%), Gaps = 21/347 (6%) Query: 35 DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 D PF E FE E + K++ Y M+ IRR E + +LY + G Sbjct: 46 DKPFTVRLSDESFETYELDPPPYTLETTKKELKQMYYDMVAIRRMEMASDRLYKEKKIRG 105 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEAV VG++ ++T D++ITAYR HG L G ++ EL GR+ GI+ GK Sbjct: 106 FCHLSTGQEAVAVGIEHAITPEDKLITAYRCHGFALMRGGTVKSVIGELLGRREGIAYGK 165 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMF+ F+GG+GIVGAQV +G G+AFA +Y + +GDGA+NQGQV+E+ Sbjct: 166 GGSMHMFAPN--FFGGNGIVGAQVPVGAGLAFAQQYNGEKTCSIALYGDGASNQGQVFEA 223 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A LWNL V++ ENN+Y MGTS +R+SA T++ KRG IPG++V+GMD+ A+KA Sbjct: 224 FNMAKLWNLPVLFGCENNKYGMGTSAARSSALTDYYKRGQ--YIPGIKVNGMDVLAIKAA 281 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 + Y A KGP++ E +TYRY GHSMSDP YR+REEI MRS HD I ++++LL Sbjct: 282 VQYGREYAIAGKGPLVYEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTHDAIAGLKQKLL 341 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQ--SDKEPDPAELYSDILI 364 +E +LK I+ R ++ V A+ + EP P LY DI + Sbjct: 342 DWSVVTEEELKAIDKEARSFVDEEVAEAEKMAPPEPTPRILYEDIFV 388 >gi|170058473|ref|XP_001864937.1| pyruvate dehydrogenase [Culex quinquefasciatus] gi|167877569|gb|EDS40952.1| pyruvate dehydrogenase [Culex quinquefasciatus] Length = 371 Score = 295 bits (754), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 145/322 (45%), Positives = 216/322 (67%), Gaps = 9/322 (2%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 F+VS ++Q + Y+ M +IRR E AG LY +V GFCHL GQEA GMK ++ Sbjct: 29 FQVS---RDQAIELYKQMQIIRRLETSAGNLYKEKIVRGFCHLYSGQEACACGMKSAMRP 85 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D +I+AYR HG GV +++ELTG+QGG ++GKGGSMHM++ FYGG+GIVG Sbjct: 86 QDNIISAYRVHGWTYLMGVPPKGVLSELTGKQGGCARGKGGSMHMYAPN--FYGGNGIVG 143 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 AQV LG G+A A +Y+ + +C+ +GDGA+NQGQ++E++NIA LW L I+V ENN Y Sbjct: 144 AQVPLGAGVALACQYKGNKGVCLALYGDGASNQGQIFEAYNIAHLWKLPCIFVCENNGYG 203 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTS +R+S TN+ +RG +PG+ VDGMD+ AVK + A+ Y +KGP+++E+ T Sbjct: 204 MGTSAARSSCNTNYFQRGDV--LPGIWVDGMDVIAVKLATEFAIDYV-LNKGPLVMEVCT 260 Query: 282 YRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YRY GHSMSDP +YRTR+E+ E+R DPI + +++ + ++K+++ ++K + Sbjct: 261 YRYSGHSMSDPGTSYRTRDEVQEVRQTRDPISSFKDKIIAAGLVTADEIKKMDGEIKKEV 320 Query: 341 NNSVEFAQSDKEPDPAELYSDI 362 + + + A++D E EL +D+ Sbjct: 321 DEATKSAKADTEIGLPELTTDV 342 >gi|321259728|ref|XP_003194584.1| pyruvate dehydrogenase e1 component alpha subunit, mitochondrial precursor [Cryptococcus gattii WM276] gi|317461056|gb|ADV22797.1| Pyruvate dehydrogenase e1 component alpha subunit, mitochondrial precursor, putative [Cryptococcus gattii WM276] Length = 413 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 147/316 (46%), Positives = 207/316 (65%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 K++ +S Y M+ +RR E+ A LY ++ GFCHL IGQEAV VGM+ ++ + D++IT Sbjct: 77 TKDELVSMYHTMVQMRRMEQAADALYKQKLIRGFCHLAIGQEAVSVGMETAIDDKDRVIT 136 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR H + G ++AEL GR+ G+S GKGGSMH+F+ F+GG+GIVGAQV +G Sbjct: 137 SYRCHTFAVLRGGTIKGVLAELMGRKDGMSFGKGGSMHIFTPT--FFGGNGIVGAQVPVG 194 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+A A KY + +GDGA+NQGQV+E+FN+A LWNL ++V ENN+Y MGTS Sbjct: 195 AGVALAQKYNKEKAATFALYGDGASNQGQVFEAFNMAKLWNLPCVFVCENNKYGMGTSAE 254 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R+S T F RG IPG+QV+GMDI AV+ A + + KGP+++E +TYRY GH Sbjct: 255 RSSMNTQFFTRGD--KIPGLQVNGMDILAVREATKWAKDWVTSGKGPLLMEFVTYRYGGH 312 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP YRTREE+ +MRS+ D I ++K +L E LK I+ + ++ ++ +VE Sbjct: 313 SMSDPGTTYRTREEVQQMRSSQDAIAGLKKYILEWGVTDEASLKAIDKSAKEEVDAAVEE 372 Query: 347 AQSDKEPDPAELYSDI 362 A+ PD E +SDI Sbjct: 373 AKKSPVPDQVEFWSDI 388 >gi|331238071|ref|XP_003331691.1| pyruvate dehydrogenase E1 component subunit alpha [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309310681|gb|EFP87272.1| pyruvate dehydrogenase E1 component subunit alpha [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 540 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 154/332 (46%), Positives = 210/332 (63%), Gaps = 12/332 (3%) Query: 35 DIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG 94 D P LE E K + + YR M+ +RR E A LY M+ GFCHL IGQEAV VG Sbjct: 187 DAPSLE----LEMTKAELVQMYRWMVTMRRMEMAADALYKQKMIRGFCHLAIGQEAVSVG 242 Query: 95 MKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 M+ ++ D++ITAYR H + G ++AEL GR+ G+S GKGGSMH+F+ F+ Sbjct: 243 MESAIKPDDKVITAYRCHPFAVLRGGTIKGVIAELLGRKDGMSSGKGGSMHIFTPT--FF 300 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDK--ICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 GG+GIVGAQV +G GIA A KY D + +GDGA+NQGQV+E+FN+A LWNL + Sbjct: 301 GGNGIVGAQVPVGAGIALAQKYLNQDDKHATFIMYGDGASNQGQVFEAFNMAKLWNLPAV 360 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +V ENN Y MGTS R+S+ T + RG IPG+Q +GMD+ +V A + + K Sbjct: 361 FVCENNLYGMGTSAERSSSNTKYFTRGD--QIPGLQANGMDVLSVHNACKYAKEWTTSGK 418 Query: 273 GPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 GP+++E +TYRY GHSMSDP YR+REEI MRS +DPI +R RLL E +LK Sbjct: 419 GPLLLEFITYRYGGHSMSDPGTTYRSREEIQHMRSTNDPITGLRNRLLEWNVIEEAELKA 478 Query: 332 IEMNVRKIINNSVEFAQSDKEPDP-AELYSDI 362 I+ + ++ +VE A+ EP+P ++++DI Sbjct: 479 IDKQAKAEVDVAVEEAKKSPEPNPETDMWTDI 510 >gi|116192013|ref|XP_001221819.1| hypothetical protein CHGG_05724 [Chaetomium globosum CBS 148.51] gi|88181637|gb|EAQ89105.1| hypothetical protein CHGG_05724 [Chaetomium globosum CBS 148.51] Length = 412 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 166/373 (44%), Positives = 227/373 (60%), Gaps = 32/373 (8%) Query: 20 SVSAKR-----AATSSVDCVDIPFLE-----------GFEVSEFN---------KEQELS 54 S+ A+R AA++ VD IP E FE E + K+Q Sbjct: 24 SIVARRTVTTNAASAEVDKSSIPQAEEEPFHIKLNDESFETYELDPPPYTLEVTKKQLKD 83 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR M+++R+ E A +LY + GFCHL GQEAV VG++ ++ + D +IT+YR HG Sbjct: 84 MYRDMVVVRQMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAINKDDDVITSYRCHGF 143 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G I+ EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV +G G+AFA Sbjct: 144 AYMRGGTVRSIIGELLGRREGIAYGKGGSMHMFA--KGFYGGNGIVGAQVPVGAGLAFAQ 201 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY S K V+ +GDGA+NQGQV+E+FN+A LW L ++ ENN+Y MGTS +R+SA T+ Sbjct: 202 KYTDSKKATVILYGDGASNQGQVFEAFNMAKLWKLPALFGCENNKYGMGTSAARSSALTD 261 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++V+GMDI AVKA + + GP+++E +TYRY GHSMSDP Sbjct: 262 YYKRGQY--IPGLKVNGMDILAVKAAVQYGKQWTEEGNGPLVLEYVTYRYGGHSMSDPGT 319 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTREEI MRS +DPI +++ +L A E +LK I+ R +N V A++ P Sbjct: 320 TYRTREEIQRMRSTNDPIAGLKQHILDWGVAQEDELKTIDKEARSHVNEEVAAAEAMAHP 379 Query: 354 DPAE--LYSDILI 364 +P L+ DI + Sbjct: 380 EPTPKILFEDIYV 392 >gi|195477038|ref|XP_002100071.1| GE16362 [Drosophila yakuba] gi|194187595|gb|EDX01179.1| GE16362 [Drosophila yakuba] Length = 485 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 160/335 (47%), Positives = 213/335 (63%), Gaps = 7/335 (2%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 ++ C D+ +V E +++ L+ Y ML +RRFE AG Y + GFCHL GQ Sbjct: 41 NTFKCYDLENGPTMDV-ELSRDDALAMYTQMLEVRRFETLAGNYYKERKIRGFCHLYNGQ 99 Query: 89 EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 EAV VGMK L D +ITAYR H GV +IM EL G + G S+GKGGSMHM+S Sbjct: 100 EAVAVGMKQRLRSCDSVITAYRCHAWTYLMGVSMHEIMGELLGVRSGCSRGKGGSMHMYS 159 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 + FYGG+GIVGAQV LG GIA A++YR+ + + VV +GDGAANQGQV+ES+N+A LW Sbjct: 160 DR--FYGGNGIVGAQVPLGAGIALAHRYRKDNGVAVVLYGDGAANQGQVFESYNMAKLWC 217 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L I+V ENN Y MGT V RASA + F RG IPG+ VDG + AV++ AV + Sbjct: 218 LPCIFVCENNHYGMGTHVRRASAMSEFYMRGQY--IPGLWVDGNQVLAVRSATQFAVDHA 275 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 H GPI++EM TYRY GHSMSDP +YR+R+E+ R DPI R +++ A E Sbjct: 276 LNH-GPIVLEMSTYRYVGHSMSDPGTSYRSRDEVQAAREKSDPITSFRSQIIALCLADEE 334 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +LK +E +K +++ + A +DKE + EL++DI Sbjct: 335 ELKALEDKTKKQVDSICKKASTDKEVELHELHTDI 369 >gi|195388254|ref|XP_002052798.1| GJ17759 [Drosophila virilis] gi|194149255|gb|EDW64953.1| GJ17759 [Drosophila virilis] Length = 420 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 147/308 (47%), Positives = 204/308 (66%), Gaps = 6/308 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR ++ IRR E A QLY +V GFCHL GQEA VG+ +L D +I YR HG Sbjct: 88 YRQLVAIRRLEAAAAQLYREQLVRGFCHLYTGQEACAVGLCAALRPQDNLIAGYRIHGWA 147 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GV A+ ++AELTGR G ++GKGGSMHM++ FYGG+GIVGAQ+SLGTGIA ANK Sbjct: 148 YLMGVTAAAVLAELTGRASGCAQGKGGSMHMYAPN--FYGGNGIVGAQISLGTGIALANK 205 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 YR++ +C +GDGAANQGQ++E +N+A LW L +++V ENN Y MGTS RAS+ TN+ Sbjct: 206 YRKNGAVCFALYGDGAANQGQIFECYNMAQLWKLPIVFVCENNNYGMGTSAWRASSNTNY 265 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-AN 294 RG +PG+ VDG D+ AV++ A+ + + +GP+++E+ TYRY GHSMSDP + Sbjct: 266 YTRGDY--LPGVWVDGQDVLAVRSATRFAIEHAQ-QRGPLVLELCTYRYAGHSMSDPGTS 322 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRTREE+ ++R D IE+ RK L ++ L IE VR + +++ A++D E Sbjct: 323 YRTREEVQQVRQRQDAIERFRKICLEMSLLTQTQLLGIERTVRDEMELAIKAARTDVELP 382 Query: 355 PAELYSDI 362 + L +D+ Sbjct: 383 LSHLCNDV 390 >gi|149234441|ref|XP_001523100.1| pyruvate dehydrogenase E1 component [Lodderomyces elongisporus NRRL YB-4239] gi|146453209|gb|EDK47465.1| pyruvate dehydrogenase E1 component [Lodderomyces elongisporus NRRL YB-4239] Length = 409 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 157/348 (45%), Positives = 219/348 (62%), Gaps = 15/348 (4%) Query: 28 TSSVDCVDIP--FLEGFEVS----EFNKEQE--LSAYRLMLLIRRFEEKAGQLYGMGMVG 79 +S + VD+P EG+ + EF E+E L Y+ M++IRR E + LY + Sbjct: 37 SSDLVTVDLPKSSFEGYNLEVPELEFETEKETLLQMYKDMIVIRRMEMASDALYKAKKIR 96 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL IGQEAV VG++ ++ D +IT+YR HG G I+AEL GR+ G+S G Sbjct: 97 GFCHLSIGQEAVAVGIENAIGPKDTVITSYRCHGFAHMRGASVKSILAELMGRRSGVSYG 156 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMF+ GFYGG+GIVGAQV LG G+AF++KY+ + +GDGA+NQGQV+E Sbjct: 157 KGGSMHMFAP--GFYGGNGIVGAQVPLGAGLAFSHKYKGEKAVNFCLYGDGASNQGQVFE 214 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 S+N+A LWNL I+V ENN+Y MGTS +R+SA T + KRG IPG++++GMD+ A Sbjct: 215 SYNMAKLWNLPCIFVCENNKYGMGTSAARSSAMTEYYKRGQY--IPGLKINGMDVLACYQ 272 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRL 318 A + GP+++E TYRY GHSMSDP YRTREE+ MRS DPI ++ L Sbjct: 273 GSKFAKDWATQGNGPLVVEFETYRYGGHSMSDPGTTYRTREEVQHMRSKSDPIAGLKAVL 332 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE--LYSDILI 364 L A+E ++K+ + RK ++ V A++D P+ L+ D+ + Sbjct: 333 LEKNIATEEEIKKYDKAARKYVDEQVAEAEADAPPEARMDILFEDVYV 380 >gi|213404912|ref|XP_002173228.1| pyruvate dehydrogenase E1 component subunit alpha [Schizosaccharomyces japonicus yFS275] gi|212001275|gb|EEB06935.1| pyruvate dehydrogenase E1 component subunit alpha [Schizosaccharomyces japonicus yFS275] Length = 406 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 152/332 (45%), Positives = 213/332 (64%), Gaps = 11/332 (3%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 +D+P L+ E K + L Y+ M+ +RR E A LY + GFCHL +GQEAV V Sbjct: 66 MDVPSLD----LEVTKNELLKMYQDMVAVRRLELAADGLYKAKKIRGFCHLSVGQEAVAV 121 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 GM+ ++ D++IT+YR HG GV I+ EL GR+ G+SKGKGGSMHMF F Sbjct: 122 GMENAIEPEDKIITSYRCHGLAYMRGVAVRAIIGELLGREVGVSKGKGGSMHMFGPN--F 179 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 YGG+GIVGAQV LG G+AFA KY + +GDGAANQGQV+E+FN+A LW + I+ Sbjct: 180 YGGNGIVGAQVPLGAGLAFAQKYMNKPNVTFAMYGDGAANQGQVFEAFNMAKLWGIPAIF 239 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 ENN+Y MGTS R+SA T + KRG IPG++V+GMD+ AVK + ++ Sbjct: 240 TCENNKYGMGTSAERSSAMTEYYKRGQY--IPGLRVNGMDVLAVKRACKYLKDFALKNQT 297 Query: 274 PIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P+++E +TYRY GHSMSDP YRTREEI ++R+ DPIE ++++++ A+ +LK + Sbjct: 298 PLVVEFVTYRYGGHSMSDPGTTYRTREEIQKVRATKDPIEGLKRQIMEWGVANANELKSL 357 Query: 333 EMNVRKIINNSVEFAQSDKEPDP--AELYSDI 362 E VR +++ V A++ P+ A L++DI Sbjct: 358 EKKVRAFVDDEVAAAEASPFPEATRANLFADI 389 >gi|50293763|ref|XP_449293.1| hypothetical protein [Candida glabrata CBS 138] gi|49528606|emb|CAG62267.1| unnamed protein product [Candida glabrata] Length = 408 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 146/315 (46%), Positives = 207/315 (65%), Gaps = 7/315 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L ++ M++IRR E LY + GFCHL +GQEA+ VG++ ++T+ D +IT+YR H Sbjct: 70 LQMFKDMVIIRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIENAITKRDSVITSYRCH 129 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G G ++AEL G++ G+S GKGGSMH+F+ GFYGG+GIVGAQV +G G+AF Sbjct: 130 GFTYMRGASVQAVLAELMGKRSGVSFGKGGSMHLFAP--GFYGGNGIVGAQVPVGAGLAF 187 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A++Y+ D +GDGA+NQGQV+ESFN+A LWNL V++ ENN+Y MGT+ +R+SA Sbjct: 188 AHQYKNEDACSFTLYGDGASNQGQVFESFNMAKLWNLPVVFCCENNKYGMGTAAARSSAM 247 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T + KRG IPG++V+GMDI AV A +C + KGP+++E TYRY GHSMSDP Sbjct: 248 TEYFKRGQY--IPGLKVNGMDILAVYQASKFAKEWCLSGKGPLVLEYETYRYGGHSMSDP 305 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 YRTR+EI MRS +DPI ++ LL A+E ++K + RK ++ VE A Sbjct: 306 GTTYRTRDEIQHMRSKNDPIAGLKMHLLELGIATEEEVKAYDKAARKYVDEQVELADKSA 365 Query: 352 EPDP--AELYSDILI 364 P+ + L+ D+ + Sbjct: 366 PPEAKLSILFEDVYV 380 >gi|326472322|gb|EGD96331.1| pyruvate dehydrogenase E1 component alpha subunit [Trichophyton tonsurans CBS 112818] Length = 422 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 166/375 (44%), Positives = 230/375 (61%), Gaps = 24/375 (6%) Query: 6 QDVTVGDIKMALNPSVSAKR----AATSSVDCVDIPFLEGFEVSEFN---------KEQE 52 +D+ V I N + A R + SSV D E FE E + K++ Sbjct: 37 EDIPVVRIPGLPNERIHAGRKEKMTSPSSVKLSD----ESFETYELDPPPYTLKTTKKEL 92 Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 Y M+ IRR E A +LY + GFCHL GQEAV G++ ++T D++ITAYR H Sbjct: 93 KQMYYDMVSIRRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAITPDDKLITAYRCH 152 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G + G I+ EL GR+ GI+ GKGGSMHMF+ KN F+GG+GIVGAQV +G G+AF Sbjct: 153 GFAMMRGGTVRSIIGELLGRREGIAYGKGGSMHMFA-KN-FFGGNGIVGAQVPVGAGLAF 210 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A +Y V +GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGT+ +R+SA Sbjct: 211 AQQYNGEANTTVCLYGDGASNQGQVFEAFNMAKLWNLPVMFGCENNKYGMGTAANRSSAL 270 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T++ KRG IPG++V+GMD+ A+KA + Y + +GP++ E +TYRY GHSMSDP Sbjct: 271 TDYYKRGQY--IPGIKVNGMDVLAIKAAVQYGREYTVSGQGPLVFEYVTYRYGGHSMSDP 328 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 YRTREEI MRS +DPI ++++LL SE +LK I+ + R +++ V A+ Sbjct: 329 GTTYRTREEIQRMRSTNDPIAGLKQKLLDWNITSEEELKAIDKDARSMVDEEVAIAEKMP 388 Query: 352 EPD--PAELYSDILI 364 PD P L+ DI + Sbjct: 389 VPDATPRILFEDIYV 403 >gi|23306664|gb|AAN15218.1| pyruvate dehydrogenase E1a-like subunit IAR4 [Arabidopsis thaliana] Length = 393 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 149/323 (46%), Positives = 212/323 (65%), Gaps = 10/323 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E + E+ L+ +R M +RR E A LY ++ GFCHL GQEA+ VGM+ ++T+ D + Sbjct: 57 ETSSEEILAFFRDMARMRRMEIAADSLYKAKLIRGFCHLYDGQEALAVGMEAAITKKDAI 116 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YR+H + G +EL GR+ G S GKGGSMH + FYGGHGIVGAQ+ Sbjct: 117 ITSYRDHCTFIGRGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQIP 176 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN MGT+ Sbjct: 177 LGCGLAFAQKYNKDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHDGMGTA 236 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTY 282 R++ + KRG +PG++VDGMD AVK +A + + H GPII+EM TY Sbjct: 237 TWRSAKSPAYFKRGD--YVPGLKVDGMDALAVK----QACKFAKEHALKNGPIILEMDTY 290 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI+ +R DPIE+VRK LL + A+E +LK++E +RK ++ Sbjct: 291 RYHGHSMSDPGSTYRTRDEISGVRQVRDPIERVRKLLLTHDIATEKELKDMEKEIRKEVD 350 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 ++V A+ PD +EL++++ + Sbjct: 351 DAVAQAKESPIPDASELFTNMYV 373 >gi|289740627|gb|ADD19061.1| pyruvate dehydrogenase E1 alpha subunit [Glossina morsitans morsitans] Length = 403 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 161/343 (46%), Positives = 217/343 (63%), Gaps = 12/343 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + + PF +G E S + KE+ L Y M +IRR E AG LY ++ G Sbjct: 38 ATEATIQIQRPFKLHRLDQGPETSVKLTKEEALLYYTQMQVIRRIETSAGNLYKEKIIRG 97 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++T+ D +I+AYR HG GV ++AELTGRQ G S+GK Sbjct: 98 FCHLYSGQEACAVGMKSAMTDVDNIISAYRVHGWTYLMGVPPLGVLAELTGRQKGSSRGK 157 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+ FYGG+GIVGAQV LG G+A A +Y+ + +C +GDGA+NQGQV+E+ Sbjct: 158 GGSMHMYG--RNFYGGNGIVGAQVPLGAGVALACQYKGNGGMCYALYGDGASNQGQVFEA 215 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS R+S T++ RG IPG+ VDGMD+ AV++ Sbjct: 216 YNMAYLWRLPVIFVCENNNYGMGTSAERSSCNTDYYTRGDV--IPGIWVDGMDVLAVRSA 273 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 A Y KGPI++E TYRY GHSMSDP +YRTREEI E+RS DPI ++ + Sbjct: 274 SLFAREYA-TKKGPIVLETNTYRYSGHSMSDPGTSYRTREEIQEVRSKRDPISSFKELCI 332 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + S ++K I+ VRK ++ + A++D E L++D+ Sbjct: 333 EHGLISADEVKVIDNKVRKEVDEATAQAKADTELPLQGLWTDV 375 >gi|290981818|ref|XP_002673628.1| pyruvate dehydrogenase E1 alpha subunit [Naegleria gruberi] gi|284087213|gb|EFC40884.1| pyruvate dehydrogenase E1 alpha subunit [Naegleria gruberi] Length = 411 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 154/328 (46%), Positives = 210/328 (64%), Gaps = 12/328 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + KE+ ++ YR+M LIRRFE + Q Y + GFCHL GQEA+ VG++ + D + Sbjct: 69 KLTKEELIAMYRMMALIRRFELVSDQQYKARNIRGFCHLYSGQEAICVGIEHATNRADSV 128 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+HG L G MAE GR G SKGKGGSMHM+ F+GG+GIVGAQV Sbjct: 129 ITAYRDHGFQLCRGGSVESTMAEQLGRATGCSKGKGGSMHMYKIDQNFFGGNGIVGAQVP 188 Query: 166 LGTGIAFA--------NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 +G G+AFA NK + + +GDGAANQGQ+YE+FN+A LW++ VI+V EN Sbjct: 189 VGAGLAFAHSYLDRLNNKQTKDKNVTFALYGDGAANQGQIYEAFNMAKLWHIPVIFVCEN 248 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N+Y MGTS+ R+SA T++ RG F IPG+ VDGMDI AV A Y + GPI++ Sbjct: 249 NKYGMGTSMQRSSASTDYYTRG-DF-IPGIWVDGMDIIAVYEAARYAKEYSQQF-GPIVL 305 Query: 278 EMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E TYRY GHSMSDP +YRTR+E+NE+R+ DPI +++ R++ A+E +LKEI+ V Sbjct: 306 EPETYRYYGHSMSDPGISYRTRDEVNEVRNTRDPIARLKARMIEQGIATEDELKEIDNQV 365 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDILI 364 ++ + E A + P EL D+++ Sbjct: 366 KEEVQQGTEKAIAAPLPPLHELVEDVMV 393 >gi|170583545|ref|XP_001896631.1| probable pyruvate dehydrogenase E1 component alpha subunit, mitochondrial [Brugia malayi] gi|158596155|gb|EDP34554.1| probable pyruvate dehydrogenase E1 component alpha subunit, mitochondrial, putative [Brugia malayi] Length = 403 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 152/316 (48%), Positives = 204/316 (64%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + L YR M++IRR E AG LY +V GFCHL GQEA+ VG+ S D +IT Sbjct: 56 TRNDALDYYRKMVVIRRMETAAGNLYKERLVRGFCHLYAGQEAIAVGLCASKDNEDAIIT 115 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR H G S+I++ELTGR+ G GKGGSMHM++ KN F+GG+GIVGAQ +LG Sbjct: 116 SYRCHAWTYLTGSGISQILSELTGRRTGNVYGKGGSMHMYN-KN-FFGGNGIVGAQQALG 173 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+AFA+KY + + FGDGAANQGQ+YE N+ ALW+L I++ ENN Y MGT Sbjct: 174 AGLAFAHKYNKKKNVSYTLFGDGAANQGQLYEVINMCALWDLPCIFICENNGYGMGTPAD 233 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RASA T++ RG IPG+ DGMD+ AV+ T+ + YC A KGP+++E TYRY GH Sbjct: 234 RASAVTDYYTRGDY--IPGVWADGMDVLAVRETIRWSKEYCNAGKGPLMLEFATYRYSGH 291 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YRTR+E+ +MR DPI R +++ ASE +LK I+ +K ++ +V Sbjct: 292 SMSDPGTSYRTRDEVQQMRKTCDPITGFRDKIIAAGLASEEELKGIDKEAKKEVDAAVNI 351 Query: 347 AQSDKEPDPAELYSDI 362 A+++ P LY DI Sbjct: 352 ARTEPPLPPESLYCDI 367 >gi|91215150|ref|ZP_01252122.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Psychroflexus torquis ATCC 700755] gi|91186755|gb|EAS73126.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Psychroflexus torquis ATCC 700755] Length = 332 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 145/318 (45%), Positives = 202/318 (63%), Gaps = 2/318 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG-MKMSLTEG 102 + + K+ L Y ML R+FE+K Q+Y V GF HL GQEA++ G + + E Sbjct: 1 MKKITKKTYLKWYEDMLFWRKFEDKLAQVYIQQKVRGFLHLYNGQEAILAGALHVMDLEK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H + GVD ++MAEL G+ G S+G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 DKMITAYRNHVQPIGMGVDPKRVMAELFGKATGTSQGLGGSMHIFSKEHRFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG G+AFA+KY ++ + + GDGAA QG ++E+ N+AA WNL V++ +ENN YAM Sbjct: 121 QIPLGAGLAFADKYFNTNAVTLCFLGDGAARQGSLHETLNMAANWNLPVVFCVENNGYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R S+ + K G+++ IP VDGMD V +D+A+ R KGP +++ TY Sbjct: 181 GTSVKRTSSSEDIWKLGLAYEIPSGPVDGMDPTKVAEALDEAITRARDGKGPTFLDLKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD YRT++E+ E + DPI +V+K LL K+A+E DLK I+ V+ + Sbjct: 241 RYRGHSMSDAQKYRTKDEVEEYQKI-DPISKVKKTLLDKKYATEDDLKTIDKRVKDKVKE 299 Query: 343 SVEFAQSDKEPDPAELYS 360 +FA PD +Y Sbjct: 300 CEKFADESDYPDKNVMYD 317 >gi|320583598|gb|EFW97811.1| E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex [Pichia angusta DL-1] Length = 394 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 156/359 (43%), Positives = 220/359 (61%), Gaps = 15/359 (4%) Query: 17 LNPSVSAKRAATSSVDCVDIP--FLEGFEVS------EFNKEQELSAYRLMLLIRRFEEK 68 ++P ++ A S + +D+P E +E+ E K L Y+ M++IRR E Sbjct: 13 VSPRLARTLATESDIVRIDLPETSFETYELDAPELTFETEKSTLLQMYKDMVIIRRMEMA 72 Query: 69 AGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAE 128 A LY + GFCHL +GQEA+ VG++ ++ D +IT+YR HG G ++ E Sbjct: 73 ADALYKAKKIRGFCHLSVGQEAIAVGIENAIDGNDDVITSYRCHGFTYMRGAPVKAVLGE 132 Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFG 188 L G++ G+S GKGGSMHM++ GFYGG+GIVGAQV LG G+AFA++YR +G Sbjct: 133 LMGKRCGVSYGKGGSMHMYAP--GFYGGNGIVGAQVPLGAGLAFAHQYRDKPNCTFTLYG 190 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ 248 DGAANQGQV+ESFN+A LWNL I+ ENN+Y MGTS SR+SA + KRG IPG++ Sbjct: 191 DGAANQGQVFESFNMAKLWNLPCIFACENNKYGMGTSASRSSAMVEYYKRGQY--IPGLK 248 Query: 249 VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSN 307 V+GMDI AV A +C + GP+++E TYRY GHSMSDP YRTREE+ MRS Sbjct: 249 VNGMDILAVYQASKFAKDWCISGNGPLVLEYETYRYGGHSMSDPGTTYRTREEVQNMRSR 308 Query: 308 HDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE--LYSDILI 364 +DPI ++ LL A+E ++K + + RK ++ V+ A+ P+ L+ D+ + Sbjct: 309 NDPISGLKAHLLEFGIATEDEIKAFDKSARKYVDEQVKEAEISPPPEAKMDILFEDVYV 367 >gi|170101050|ref|XP_001881742.1| mitochondrial pyruvate dehydrogenase E1 component beta subunit [Laccaria bicolor S238N-H82] gi|164643097|gb|EDR07350.1| mitochondrial pyruvate dehydrogenase E1 component beta subunit [Laccaria bicolor S238N-H82] Length = 401 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 159/339 (46%), Positives = 215/339 (63%), Gaps = 19/339 (5%) Query: 30 SVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQE 89 S C D P LE + K++ L YR M +RR E A LY ++ GFCHL IGQE Sbjct: 55 SYQC-DKPDLE----VQLTKDELLLMYRQMQTMRRMEMAADALYKAKLIRGFCHLAIGQE 109 Query: 90 AVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFST 149 AV VG++ + D++ITAYR H + G ++ EL GRQ G+S GKGGSMH+F+ Sbjct: 110 AVSVGLEHGILPNDRVITAYRCHPFAVMRGGTIKGVIGELLGRQDGMSHGKGGSMHIFTP 169 Query: 150 KNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL 209 F+GG+GIVGAQV +G G+AFA KYR +GDGA+NQGQV+E+FN+A LWNL Sbjct: 170 T--FFGGNGIVGAQVPIGAGVAFAQKYRGEKNCTFALYGDGASNQGQVFEAFNMAKLWNL 227 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 I+V ENN+Y MGTS +R+S+ T + RG IPG+QV+GMDI A K +AVAY R Sbjct: 228 PTIFVCENNRYGMGTSAARSSSNTEYYTRGD--KIPGLQVNGMDIIATK----QAVAYAR 281 Query: 270 A-----HKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 KGP+++E +TYRY GHSMSDP YRTREE+ MRS DPI ++K + Sbjct: 282 KWAVEDDKGPLLLEFVTYRYGGHSMSDPGTTYRTREEVQRMRSTQDPIRGLQKYIEEWGM 341 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 A+E +LK ++ + ++ +VE A++ EP +L++DI Sbjct: 342 ATEQELKALDKAAKAEVDAAVEEAKASPEPLIKDLWTDI 380 >gi|115399206|ref|XP_001215192.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114192075|gb|EAU33775.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 399 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 160/324 (49%), Positives = 209/324 (64%), Gaps = 12/324 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K Q Y M +IRR E A LY + GFCHL GQEAV VG++ +T+ D++ Sbjct: 63 ETTKSQLKQLYYDMSMIRRMELAADNLYKQRKIRGFCHLSTGQEAVAVGIEHGITKHDKL 122 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG L G I+ EL GR+ GIS GKGGSMHMF F+GG+GIVGA V Sbjct: 123 ITAYRSHGFTLMRGGTIKSIIGELLGRRDGISYGKGGSMHMFC--KSFFGGNGIVGANVP 180 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTGIAFA +Y + + + +GDGAANQGQV+ESFN+A LWNL VI+ ENN+Y MGTS Sbjct: 181 LGTGIAFAQQYNDAGNVTINLYGDGAANQGQVFESFNMAKLWNLPVIFGCENNKYGMGTS 240 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V RASA T + KRG IPG++V+GMD+ AV A + + +A GP++ E TYRY Sbjct: 241 VERASAMTEYYKRGQY--IPGLRVNGMDVLAVLAAIRHGKRFVQAGNGPLLYEYQTYRYA 298 Query: 286 GHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YR+REE+ RSN DPI +++RL+ +E + K I+ +VR+ +N Sbjct: 299 GHSMSDPGIAYRSREEVQSERSN-DPISNLKERLVDWGVMTEDEAKAIDKDVREKVNE-- 355 Query: 345 EFAQSDKEPDPAE----LYSDILI 364 E ++++K PDP L+ DI + Sbjct: 356 EVSEAEKMPDPEPRLDVLFEDIYV 379 >gi|195393044|ref|XP_002055164.1| GJ18942 [Drosophila virilis] gi|194149674|gb|EDW65365.1| GJ18942 [Drosophila virilis] Length = 399 Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 155/343 (45%), Positives = 218/343 (63%), Gaps = 12/343 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF EG E + + K++ L Y M IRR E AG LY ++ G Sbjct: 34 ATEATVQVNRPFKLHRLEEGPETTVKLTKDEALKYYTQMQTIRRIETAAGNLYKEKIIRG 93 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV ++ ELTG Q G ++GK Sbjct: 94 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVPPLGVLGELTGVQSGCARGK 153 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+S F+GG+GIVGAQV LGTG+A A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 154 GGSMHMYSPN--FFGGNGIVGAQVPLGTGVALACKYKGNGGMCLALYGDGAANQGQVFEA 211 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 212 YNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 269 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y +GP+++E TYRY GHSMSDP +YRTREEI E+R DPI ++ + Sbjct: 270 TEFAIKYVN-EQGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 328 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + ++K I++ VRK ++ + A+ E + L++D+ Sbjct: 329 ELGLITTDEVKAIDLKVRKEVDEATALAKGGTELALSHLWTDV 371 >gi|312073595|ref|XP_003139591.1| pyruvate dehydrogenase E1 component alpha subunit [Loa loa] gi|307765247|gb|EFO24481.1| pyruvate dehydrogenase E1 component alpha subunit [Loa loa] Length = 403 Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 149/316 (47%), Positives = 204/316 (64%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++ L YR M++IRR E AG LY +V GFCHL GQEA+ VG+ S D +IT Sbjct: 56 TRDDALDYYRKMMIIRRMETAAGNLYKERLVRGFCHLYAGQEAIAVGLCASKDSEDAIIT 115 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR H G ++I++ELTGR+ G GKGGSMHM++ KN F+GG+GIVGAQ +LG Sbjct: 116 SYRCHAWTYLTGSGITQILSELTGRRTGNVHGKGGSMHMYN-KN-FFGGNGIVGAQQALG 173 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+AFA+KY + FGDGAANQGQ+YE N+ ALW+L I++ ENN Y MGT Sbjct: 174 AGLAFAHKYNEKKNVSYTLFGDGAANQGQLYEVINMCALWDLPCIFICENNGYGMGTPAG 233 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RASA T++ RG IPG+ DGMD+ AV+ T+ + YC A KGP+++E TYRY GH Sbjct: 234 RASAVTDYYTRGDY--IPGIWADGMDVLAVRETIRWSREYCNAGKGPLMLEFATYRYSGH 291 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YRTR+E+ +MR DPI + +++ +E +LK I+ +RK ++ +V Sbjct: 292 SMSDPGTSYRTRDEVQQMRKTRDPITGFKDKIIAAGLVTEEELKGIDKEIRKEVDAAVNI 351 Query: 347 AQSDKEPDPAELYSDI 362 A+++ P LY DI Sbjct: 352 ARTEPSLPPESLYCDI 367 >gi|238489957|ref|XP_002376216.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Aspergillus flavus NRRL3357] gi|220698604|gb|EED54944.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Aspergillus flavus NRRL3357] Length = 405 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 160/360 (44%), Positives = 222/360 (61%), Gaps = 25/360 (6%) Query: 26 AATSSVDCV----DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEE 67 AA+S + V D PF E FE E + K++ Y M+ RR E Sbjct: 31 AASSHAENVPQEDDKPFTVQLSDESFETYEIDPPPYTLEVTKKELKQMYHDMVSTRRMEM 90 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 A +LY + GFCHL GQEAV G++ ++T D++ITAYR HG+ G I+ Sbjct: 91 AADRLYKEKKIRGFCHLSTGQEAVATGIEHAITRDDKIITAYRCHGYAYMRGGTIRSIIG 150 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 EL GR+ GI+ GKGGSMHMF+ FYGG+GIVGAQV +G G+AFA +Y +V + Sbjct: 151 ELLGRREGIAYGKGGSMHMFAPN--FYGGNGIVGAQVPVGAGLAFAQQYNEEPTTSIVLY 208 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGTS +R+SA T + KRG IPG+ Sbjct: 209 GDGASNQGQVFEAFNMAKLWNLPVLFGCENNKYGMGTSAARSSALTEYYKRGQY--IPGI 266 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRS 306 +V+GMD+ A KA + A Y + GP+++E +TYRY GHSMSDP YR+REEI MRS Sbjct: 267 KVNGMDVLATKAAVQYAKNYAVSGNGPLVMEYVTYRYGGHSMSDPGTTYRSREEIQRMRS 326 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE--LYSDILI 364 HDPI +++++L K +E +LK ++ R ++ V A++ PD + L+ DI + Sbjct: 327 THDPIAGLKQKILDWKVMTEDELKALDKAARAFVDEEVSIAENMPVPDNSTRILFEDIYV 386 >gi|169763976|ref|XP_001727888.1| pyruvate dehydrogenase E1 component subunit alpha [Aspergillus oryzae RIB40] gi|83770916|dbj|BAE61049.1| unnamed protein product [Aspergillus oryzae] Length = 405 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 160/360 (44%), Positives = 222/360 (61%), Gaps = 25/360 (6%) Query: 26 AATSSVDCV----DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEE 67 AA+S + V D PF E FE E + K++ Y M+ RR E Sbjct: 31 AASSHAENVPQEDDKPFTVQLSDESFETYEIDPPPYTLEVTKKELKQMYHDMVSTRRMEM 90 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 A +LY + GFCHL GQEAV G++ ++T D++ITAYR HG+ G I+ Sbjct: 91 AADRLYKEKKIRGFCHLATGQEAVATGIEHAITRDDKIITAYRCHGYAYMRGGTIRSIIG 150 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 EL GR+ GI+ GKGGSMHMF+ FYGG+GIVGAQV +G G+AFA +Y +V + Sbjct: 151 ELLGRREGIAYGKGGSMHMFAPN--FYGGNGIVGAQVPVGAGLAFAQQYNEEPTTSIVLY 208 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGTS +R+SA T + KRG IPG+ Sbjct: 209 GDGASNQGQVFEAFNMAKLWNLPVLFGCENNKYGMGTSAARSSALTEYYKRGQY--IPGI 266 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRS 306 +V+GMD+ A KA + A Y + GP+++E +TYRY GHSMSDP YR+REEI MRS Sbjct: 267 KVNGMDVLATKAAVQYAKNYAVSGNGPLVMEYVTYRYGGHSMSDPGTTYRSREEIQRMRS 326 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE--LYSDILI 364 HDPI +++++L K +E +LK ++ R ++ V A++ PD + L+ DI + Sbjct: 327 THDPIAGLKQKILDWKVMTEDELKALDKAARAFVDEEVAIAENMPVPDNSTRILFEDIYV 386 >gi|74006565|ref|XP_858561.1| PREDICTED: similar to Pyruvate dehydrogenase E1 component alpha subunit, somatic form, mitochondrial precursor (PDHE1-A type I) isoform 4 [Canis familiaris] Length = 359 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 160/335 (47%), Positives = 213/335 (63%), Gaps = 38/335 (11%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLRYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRRGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQ GQ++E++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQ-------------------------------GQIFEAYNMA 180 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 181 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 238 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 239 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 298 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 299 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 333 >gi|163786274|ref|ZP_02180722.1| pyruvate dehydrogenase E1 component alpha subunit [Flavobacteriales bacterium ALC-1] gi|159878134|gb|EDP72190.1| pyruvate dehydrogenase E1 component alpha subunit [Flavobacteriales bacterium ALC-1] Length = 333 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 149/321 (46%), Positives = 203/321 (63%), Gaps = 4/321 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM--KMSLTE 101 + + KE L Y ML R+FE+K +Y V GF HL GQEAV+ G M LT+ Sbjct: 1 MQKITKEVYLKWYEDMLFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVLAGALHAMDLTK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MITAYR H + GVD ++MAEL G+ G S+G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 -DKMITAYRNHVQPIGMGVDPKRVMAELYGKATGTSQGLGGSMHIFSKEHRFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG GIAF +KY D + + CFGDGAA QG ++E+FN+A LW L VI+V ENN YA Sbjct: 120 GQIPLGAGIAFGDKYHDKDAVTICCFGDGAARQGSLHETFNMAMLWKLPVIFVCENNGYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV R + T+ K G+ + +P VDGM+ V D+A+ R GP +E+ T Sbjct: 180 MGTSVERTANHTDIWKLGLGYEMPSGPVDGMNPIKVAEAFDEAIQRARTGGGPSFLEVKT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD +YRT++E+ E + DPI QV+ +L K+A+E +LKEI+ V+ + Sbjct: 240 YRYRGHSMSDAQHYRTKDEVEEYKKI-DPITQVKDIILEKKYATEAELKEIDKGVKTRVL 298 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 +FA+ P+ + +Y + Sbjct: 299 ECEKFAEESPYPEKSVMYDAV 319 >gi|159130919|gb|EDP56032.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Aspergillus fumigatus A1163] Length = 370 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 151/322 (46%), Positives = 211/322 (65%), Gaps = 7/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K++ Y M++ RR E A +LY + GFCHL +GQEAV G++ ++T D++ Sbjct: 34 EVTKKELKQMYYDMVVTRRMEMAADRLYKEKKIRGFCHLSVGQEAVATGIEHAITRDDKV 93 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG+ L G I+ EL GR+ GI+ GKGGSMHMF+ FYGG+GIVGAQV Sbjct: 94 ITAYRCHGYALMRGGTVRSIIGELLGRREGIAYGKGGSMHMFAPN--FYGGNGIVGAQVP 151 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+AFA +Y +V +GDGA+NQGQV+E+FN+A LWNL I+ ENN+Y MGTS Sbjct: 152 VGAGLAFAQQYNGEKATSIVLYGDGASNQGQVFEAFNMAKLWNLPAIFGCENNKYGMGTS 211 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +R+SA T++ KRG IPG++V+GMD+ A KA + A Y A GP++ E +TYRY Sbjct: 212 AARSSALTDYYKRGQY--IPGIKVNGMDVLATKAAVQYAREYTIAGNGPLVFEYVTYRYG 269 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YR+REEI MRS +DPI +++++L K +E +LK ++ + R ++ V Sbjct: 270 GHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKILDWKVMTEEELKALDKSARSHVDEEV 329 Query: 345 EFAQSDKEPD--PAELYSDILI 364 A+ P+ P L+ DI + Sbjct: 330 AIAEQMPAPENNPRILFEDIYV 351 >gi|326484492|gb|EGE08502.1| pyruvate dehydrogenase E1 component subunit alpha [Trichophyton equinum CBS 127.97] Length = 405 Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 164/368 (44%), Positives = 227/368 (61%), Gaps = 24/368 (6%) Query: 17 LNPSVSAKRAATSSVDCV---DIPFL-----EGFEVSEFN---------KEQELSAYRLM 59 L SV+ A+ + D D PF E FE E + K++ Y M Sbjct: 23 LRRSVTTDAASAHAEDIPVEDDKPFSVKLSDESFETYELDPPPYTLKTTKKELKQMYYDM 82 Query: 60 LLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACG 119 + IRR E A +LY + GFCHL GQEAV G++ ++T D++ITAYR HG + G Sbjct: 83 VSIRRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAITPDDKLITAYRCHGFAMMRG 142 Query: 120 VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 I+ EL GR+ GI+ GKGGSMHMF+ KN F+GG+GIVGAQV +G G+AFA +Y Sbjct: 143 GTVRSIIGELLGRREGIAYGKGGSMHMFA-KN-FFGGNGIVGAQVPVGAGLAFAQQYNGE 200 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V +GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGT+ +R+SA T++ KRG Sbjct: 201 ANTTVCLYGDGASNQGQVFEAFNMAKLWNLPVMFGCENNKYGMGTAANRSSALTDYYKRG 260 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTR 298 IPG++V+GMD+ A+KA + Y + +GP++ E +TYRY GHSMSDP YRTR Sbjct: 261 QY--IPGIKVNGMDVLAIKAAVQYGREYTVSGQGPLVFEYVTYRYGGHSMSDPGTTYRTR 318 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--PA 356 EEI MRS +DPI ++++LL SE +LK I+ + R +++ V A+ PD P Sbjct: 319 EEIQRMRSTNDPIAGLKQKLLDWNITSEEELKAIDKDARSMVDEEVAIAEKMPVPDATPR 378 Query: 357 ELYSDILI 364 L+ DI + Sbjct: 379 ILFEDIYV 386 >gi|258569885|ref|XP_002543746.1| pyruvate dehydrogenase E1 component alpha subunit [Uncinocarpus reesii 1704] gi|237904016|gb|EEP78417.1| pyruvate dehydrogenase E1 component alpha subunit [Uncinocarpus reesii 1704] Length = 404 Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 152/322 (47%), Positives = 207/322 (64%), Gaps = 7/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K++ YR M+ +RR E + +LY + GFCHL GQEAV VG++ +L D++ Sbjct: 68 EVTKKELKQMYRDMVAVRRMEMASDRLYKEKKIRGFCHLSTGQEAVAVGIEHALNREDKL 127 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG G I+ EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV Sbjct: 128 ITAYRCHGFAYMRGGTIKSIIGELLGRREGIAYGKGGSMHMFAP--GFYGGNGIVGAQVP 185 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+AFA +Y V +GDGA+NQGQV+E+FN+A LW L VI+ ENN+Y MGT+ Sbjct: 186 VGAGLAFAQQYEGKQNATVCLYGDGASNQGQVFEAFNMAKLWKLPVIFGCENNKYGMGTA 245 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +R+SA T++ KRG IPG++++GMD+ A+KA + Y A GP++ E +TYRY Sbjct: 246 ANRSSAMTDYYKRGQY--IPGLKINGMDVLAIKAAIKYGREYTLAGHGPLVYEYVTYRYG 303 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YRTREEI MRS +DPI ++++LL +E +LK I+ R ++ V Sbjct: 304 GHSMSDPGTTYRTREEIQRMRSTNDPIAGLKQKLLDWNVTTEEELKTIDKETRSYVDAEV 363 Query: 345 EFAQSDKEPD--PAELYSDILI 364 A+ PD P L+ DI + Sbjct: 364 AEAEKMPVPDATPRILFEDIYV 385 >gi|70991192|ref|XP_750445.1| pyruvate dehydrogenase E1 component alpha subunit [Aspergillus fumigatus Af293] gi|66848077|gb|EAL88407.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Aspergillus fumigatus Af293] Length = 370 Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 151/322 (46%), Positives = 211/322 (65%), Gaps = 7/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K++ Y M++ RR E A +LY + GFCHL +GQEAV G++ ++T D++ Sbjct: 34 EVTKKELKQMYYDMVVTRRMEMAADRLYKEKKIRGFCHLSVGQEAVSTGIEHAITRDDKV 93 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG+ L G I+ EL GR+ GI+ GKGGSMHMF+ FYGG+GIVGAQV Sbjct: 94 ITAYRCHGYALMRGGTVRSIIGELLGRREGIAYGKGGSMHMFAPN--FYGGNGIVGAQVP 151 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+AFA +Y +V +GDGA+NQGQV+E+FN+A LWNL I+ ENN+Y MGTS Sbjct: 152 VGAGLAFAQQYNGEKATSIVLYGDGASNQGQVFEAFNMAKLWNLPAIFGCENNKYGMGTS 211 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +R+SA T++ KRG IPG++V+GMD+ A KA + A Y A GP++ E +TYRY Sbjct: 212 AARSSALTDYYKRGQY--IPGIKVNGMDVLATKAAVQYAREYTIAGNGPLVFEYVTYRYG 269 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YR+REEI MRS +DPI +++++L K +E +LK ++ + R ++ V Sbjct: 270 GHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKILDWKVMTEEELKALDKSARSHVDEEV 329 Query: 345 EFAQSDKEPD--PAELYSDILI 364 A+ P+ P L+ DI + Sbjct: 330 AIAEQMPAPENNPRILFEDIYV 351 >gi|260946491|ref|XP_002617543.1| hypothetical protein CLUG_02987 [Clavispora lusitaniae ATCC 42720] gi|238849397|gb|EEQ38861.1| hypothetical protein CLUG_02987 [Clavispora lusitaniae ATCC 42720] Length = 398 Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 157/367 (42%), Positives = 221/367 (60%), Gaps = 23/367 (6%) Query: 17 LNP-----SVSAKR---AATSSVDCVDIPF--LEGFEVS------EFNKEQELSAYRLML 60 +NP + AKR A S + +D+P E + + E KE L Y+ M+ Sbjct: 7 INPLPRVLATGAKRNLAVAASDLVTIDLPASSFETYNIDAPELTFETEKETLLQMYKDMI 66 Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 +IRR E A LY + GFCHL +GQEA+ VG++ ++ D +IT+YR HG G Sbjct: 67 VIRRMEMAADALYKAKKIRGFCHLSVGQEAIAVGIENAIAPTDTVITSYRCHGFAHMRGA 126 Query: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 ++ EL G++ G+S GKGGSMHMF+ GFYGG+GIVGAQV LG G++FA+KYR Sbjct: 127 SVKSVLGELMGKRSGVSYGKGGSMHMFAP--GFYGGNGIVGAQVPLGAGLSFAHKYRNDK 184 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 +GDGA+NQGQV+ES+N+A LW+L ++ ENN+Y MGTS SR+SA T + KRG Sbjct: 185 GATFALYGDGASNQGQVFESYNMAKLWDLPCVFACENNKYGMGTSASRSSAMTEYYKRGQ 244 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTRE 299 IPG++V+GMDI A A +C + GP+++E TYRY GHSMSDP YRTRE Sbjct: 245 Y--IPGLKVNGMDILACYQASKFAKDWCSSGNGPLVLEYETYRYGGHSMSDPGTTYRTRE 302 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE-- 357 E+ MRS +DPI ++ LL A+E ++K + RK ++ A++D P+ Sbjct: 303 EVQHMRSRNDPIAGLKAILLDKNIATEEEIKSYDKAARKYVDEQTAEAEADAPPEAKMEI 362 Query: 358 LYSDILI 364 L+ D+ + Sbjct: 363 LFEDVYV 369 >gi|255948700|ref|XP_002565117.1| Pc22g11710 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592134|emb|CAP98459.1| Pc22g11710 [Penicillium chrysogenum Wisconsin 54-1255] Length = 405 Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 159/349 (45%), Positives = 216/349 (61%), Gaps = 25/349 (7%) Query: 35 DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 D PF E FE E + K++ Y M+ +RR E A +LY + G Sbjct: 44 DKPFTVRLSDESFETYELDPPSYTLETSKKELKQMYYDMVAMRRMEMAADRLYKEKKIRG 103 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEAV VG++ ++T D++ITAYR HG + G I+ EL GR+ GI+ GK Sbjct: 104 FCHLSTGQEAVAVGIEHAITRMDKVITAYRCHGFAMMRGGTVKSIIGELLGRREGIAYGK 163 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMF+ FYGG+GIVGAQV +G G+AFA +Y +V +GDGA+NQGQV+E+ Sbjct: 164 GGSMHMFA--ENFYGGNGIVGAQVPVGAGLAFAQQYNEQPNTSIVLYGDGASNQGQVFEA 221 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A LWNL V++ ENN+Y MGTS SR+SA T + KRG IPG++V+GMD+ A KA Sbjct: 222 FNMAKLWNLPVLFGCENNKYGMGTSASRSSALTEYYKRGQY--IPGLKVNGMDVLATKAA 279 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 + + Y GP+++E +TYRY GHSMSDP YR+REEI MRS HDPI +++++L Sbjct: 280 VQYSKNYAITGNGPLVLEYVTYRYGGHSMSDPGTTYRSREEIQRMRSTHDPIAGLKQKML 339 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE----LYSDILI 364 SE +LK ++ R N E A+++K P P L+ DI + Sbjct: 340 EWGVTSEEELKGLDKTAR--ANVDAEVAEAEKMPVPDNTSRILFEDIYV 386 >gi|119511804|ref|ZP_01630905.1| Dehydrogenase, E1 component [Nodularia spumigena CCY9414] gi|119463516|gb|EAW44452.1| Dehydrogenase, E1 component [Nodularia spumigena CCY9414] Length = 344 Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 141/325 (43%), Positives = 214/325 (65%), Gaps = 9/325 (2%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + ++ KE+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ ++ G Sbjct: 13 KTTKITKEEGLRLYEDMVLGRSFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIQAMRPG 72 Query: 103 DQMITA-YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 + +++ YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS ++G GG+ V Sbjct: 73 EDFVSSTYRDHVHALSAGVPAREVMAELFGKATGCSKGRGGSMHMFSAEHGLLGGYAFVA 132 Query: 162 AQVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 + + G AF +KYRR +D++ FGDGAAN GQ +E+ N+A+LW L +I+V Sbjct: 133 EGIPVAAGAAFQSKYRREVLKDQNADQVTACFFGDGAANNGQFFETLNMASLWKLPIIFV 192 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 +ENN++A+G S RA++Q K+ FN+ G++VDGMD+ AV+A +AVA RA +GP Sbjct: 193 VENNKWAIGMSHERATSQPEIYKKASVFNMVGVEVDGMDVLAVRAVAQEAVARARAGEGP 252 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 +IE LTYR+RGHS++DP R++ E E + DPI+++ LL A + +LK I+ Sbjct: 253 TLIEALTYRFRGHSLADPDEMRSKAE-KEFWFSRDPIKKLAAYLLEQNLADDAELKAIDR 311 Query: 335 NVRKIINNSVEFAQSDKEPDPAELY 359 ++++I+ +V+FA+S EPDP+ELY Sbjct: 312 KIQEVIDEAVKFAESSPEPDPSELY 336 >gi|83767354|dbj|BAE57493.1| unnamed protein product [Aspergillus oryzae] Length = 371 Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 157/322 (48%), Positives = 208/322 (64%), Gaps = 8/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K + Y M +IRR E A LY + GFCHL GQEAV VG++ +LT+ D++ Sbjct: 35 ETTKRELKQLYHDMTMIRRMELAADGLYKDRKIRGFCHLSTGQEAVAVGIEHALTKQDKL 94 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG L G I+ EL GR+ GIS GKGGSMHMF F+GG+GIVGA V Sbjct: 95 ITAYRSHGFTLMRGGTVKSIIGELLGRRDGISYGKGGSMHMFC--ESFFGGNGIVGASVP 152 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G GIAFA +Y ++ + + +GDGAANQGQV+E+FN+A LWNL VI+ ENN+Y MGTS Sbjct: 153 VGAGIAFAQQYNDANNVTIDLYGDGAANQGQVHEAFNMAKLWNLPVIFGCENNKYGMGTS 212 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V RASA T + KRG IPG++++GMD+ AV + + + +A GP++ E +TYRY Sbjct: 213 VERASAMTEYYKRGQY--IPGLRINGMDVLAVLSAVRYGKNFIQAGNGPLVYEYMTYRYA 270 Query: 286 GHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YR+REE+ + R+N DPI ++RL+ SE D K I+ NVR +N+ V Sbjct: 271 GHSMSDPGIAYRSREELKDQRAN-DPISNFKERLIEWGVFSEEDAKAIDKNVRSKVNDEV 329 Query: 345 EFAQSDKEPDPAE--LYSDILI 364 A+ EPD L+ DI + Sbjct: 330 AEAEKMPEPDTKLDILFEDIYV 351 >gi|305664623|ref|YP_003860910.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase subunit alpha [Maribacter sp. HTCC2170] gi|88708640|gb|EAR00876.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Maribacter sp. HTCC2170] Length = 331 Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 149/319 (46%), Positives = 202/319 (63%), Gaps = 4/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM--KMSLTE 101 + + KE L Y ML R+FE+K +Y V GF HL GQEAV+ G M LT+ Sbjct: 1 MEKITKETYLKWYEDMLFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVLAGALHAMDLTK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MITAYR H + GVD +MAEL G+ G SKG GGSMH+FS ++ FYGGHGIVG Sbjct: 61 -DRMITAYRNHVQPIGMGVDPKNVMAELYGKVTGTSKGMGGSMHIFSKEHRFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG G+AFA+KY + D + + GDGA QG ++E+FN+A LWNL V++V ENN YA Sbjct: 120 GQIPLGAGLAFADKYFKRDSVTLCYMGDGAVRQGSLHETFNLAMLWNLPVVFVCENNGYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSVSR ++ K G+ + +P VDGMD V M KA+ R GP +EM T Sbjct: 180 MGTSVSRTASHEEIWKLGLGYEMPCGPVDGMDPVTVAKEMSKAIERARNGDGPTFLEMKT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD +YRT++E+ E + DPI QV++ + ++ASE ++KEI+ V++++ Sbjct: 240 YRYRGHSMSDAQHYRTKDEVEEYKKI-DPISQVKEVIFEKEYASEDEIKEIDQRVKELVL 298 Query: 342 NSVEFAQSDKEPDPAELYS 360 +FA+ P +LY Sbjct: 299 ECEKFAEDSDYPPVNQLYD 317 >gi|121702397|ref|XP_001269463.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Aspergillus clavatus NRRL 1] gi|119397606|gb|EAW08037.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Aspergillus clavatus NRRL 1] Length = 405 Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 160/360 (44%), Positives = 222/360 (61%), Gaps = 25/360 (6%) Query: 26 AATSSVDCV----DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEE 67 AA+S + V D PF E FE E + K++ Y M++ RR E Sbjct: 31 AASSHAENVPQEDDKPFTVKLSDESFETYELDPPPYDLEVTKKELTQMYYDMVVTRRMEL 90 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 A +LY + GFCHL +GQEAV VG++ ++T D++ITAYR HG+ L G I+ Sbjct: 91 AADRLYKEKKIRGFCHLSVGQEAVAVGIENAITRLDKVITAYRCHGYALMRGGTVRSIIG 150 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 EL GR+ GI+ GKGGSMHMF+ F+GG+GIVGAQV +G G+AFA +Y +V + Sbjct: 151 ELLGRREGIAYGKGGSMHMFAPN--FFGGNGIVGAQVPVGAGLAFAQQYNEEKATSIVLY 208 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGA+NQGQV+E+FN+A LW L ++ ENN+Y MGTS +R+SA T + KRG IPG+ Sbjct: 209 GDGASNQGQVFEAFNMAKLWKLPALFGCENNKYGMGTSAARSSALTEYYKRGQY--IPGI 266 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRS 306 +V+GMD+ A KA + A Y A GP++IE +TYRY GHSMSDP YR+REEI MRS Sbjct: 267 KVNGMDVLATKAAVKYARDYAIAGNGPVVIEYVTYRYGGHSMSDPGTTYRSREEIQRMRS 326 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE--LYSDILI 364 HDPI +++++L + SE +LK ++ R ++ V A+ P+ L+ DI + Sbjct: 327 THDPIAGLKQKILDWQVMSEDELKALDKAARSHVDEEVAIAEQMTAPENTSRNLFEDIYV 386 >gi|327295747|ref|XP_003232568.1| pyruvate dehydrogenase E1 component alpha subunit [Trichophyton rubrum CBS 118892] gi|326464879|gb|EGD90332.1| pyruvate dehydrogenase E1 component alpha subunit [Trichophyton rubrum CBS 118892] Length = 405 Score = 291 bits (746), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 158/347 (45%), Positives = 219/347 (63%), Gaps = 21/347 (6%) Query: 35 DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 D PF E FE E + K++ Y M+ IRR E A +LY + G Sbjct: 44 DKPFSVKLSDESFETYELDPPPYTLKTTKKELKQMYYDMVSIRRMEMAADRLYKEKKIRG 103 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEAV G++ ++T D++ITAYR HG + G I+ EL GR+ GI+ GK Sbjct: 104 FCHLSTGQEAVATGIEHAITPDDKLITAYRCHGFAMMRGGTVRSIIGELLGRREGIAYGK 163 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMF+ KN F+GG+GIVGAQV +G G+AFA +Y V +GDGA+NQGQV+E+ Sbjct: 164 GGSMHMFA-KN-FFGGNGIVGAQVPVGAGLAFAQQYNGEANTTVCLYGDGASNQGQVFEA 221 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A LWNL V++ ENN+Y MGT+ +R+SA T++ KRG IPG++++GMD+ A+KA Sbjct: 222 FNMAKLWNLPVMFGCENNKYGMGTAANRSSALTDYYKRGQY--IPGIKINGMDVLAIKAA 279 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 + Y + +GP++ E +TYRY GHSMSDP YRTREEI MRS +DPI ++++LL Sbjct: 280 VQYGREYTVSGQGPLVFEYVTYRYGGHSMSDPGTTYRTREEIQRMRSTNDPIAGLKQKLL 339 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--PAELYSDILI 364 SE +LK I+ + R +++ V A+ PD P L+ DI + Sbjct: 340 DWNITSEDELKAIDKDARSMVDEEVAIAEKMPVPDATPRILFEDIYV 386 >gi|256085805|ref|XP_002579102.1| pyruvate dehydrogenase [Schistosoma mansoni] gi|238664510|emb|CAZ35341.1| pyruvate dehydrogenase, putative [Schistosoma mansoni] Length = 344 Score = 291 bits (746), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 149/294 (50%), Positives = 195/294 (66%), Gaps = 5/294 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E +++ L + IRR E G +Y ++ GFCHL GQEAV VG++ +L GD Sbjct: 53 TECSRDDALRYLESLHRIRRMETALGNMYKEKLIRGFCHLYSGQEAVAVGIEAALQPGDT 112 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR HG + GV I+AEL GR+ G +KG GGSMH+++ FYGG+GIVGAQV Sbjct: 113 IITAYRCHGFTMTRGVPIHNIVAELAGRKTGCTKGLGGSMHLYAKD--FYGGNGIVGAQV 170 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG GIA K+R + V +GDGAANQGQV+E+FNIA LWNL VI++ ENN+Y MGT Sbjct: 171 PLGVGIALRMKHRGEKFVSVTLYGDGAANQGQVFEAFNIAKLWNLPVIFICENNKYGMGT 230 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R+SA T++ RG IPG+ VDGMDI V+ A +CR+ KGPI++E TYRY Sbjct: 231 SVQRSSANTSYYTRGDY--IPGLWVDGMDILTVREATRFAADWCRSDKGPILLETETYRY 288 Query: 285 RGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 GHSMSDP +YRTREE+ MR DPI +K ++ N ++ ++KEIE VR Sbjct: 289 HGHSMSDPGTSYRTREEVQSMRRGRDPIALFQKSIVDNGLCTQDEVKEIEKRVR 342 >gi|238487602|ref|XP_002375039.1| pyruvate dehydrogenase, putative [Aspergillus flavus NRRL3357] gi|317143464|ref|XP_001819495.2| pyruvate dehydrogenase E1 component subunit alpha [Aspergillus oryzae RIB40] gi|220699918|gb|EED56257.1| pyruvate dehydrogenase, putative [Aspergillus flavus NRRL3357] Length = 402 Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 157/322 (48%), Positives = 208/322 (64%), Gaps = 8/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K + Y M +IRR E A LY + GFCHL GQEAV VG++ +LT+ D++ Sbjct: 66 ETTKRELKQLYHDMTMIRRMELAADGLYKDRKIRGFCHLSTGQEAVAVGIEHALTKQDKL 125 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG L G I+ EL GR+ GIS GKGGSMHMF F+GG+GIVGA V Sbjct: 126 ITAYRSHGFTLMRGGTVKSIIGELLGRRDGISYGKGGSMHMFC--ESFFGGNGIVGASVP 183 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G GIAFA +Y ++ + + +GDGAANQGQV+E+FN+A LWNL VI+ ENN+Y MGTS Sbjct: 184 VGAGIAFAQQYNDANNVTIDLYGDGAANQGQVHEAFNMAKLWNLPVIFGCENNKYGMGTS 243 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V RASA T + KRG IPG++++GMD+ AV + + + +A GP++ E +TYRY Sbjct: 244 VERASAMTEYYKRGQY--IPGLRINGMDVLAVLSAVRYGKNFIQAGNGPLVYEYMTYRYA 301 Query: 286 GHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YR+REE+ + R+N DPI ++RL+ SE D K I+ NVR +N+ V Sbjct: 302 GHSMSDPGIAYRSREELKDQRAN-DPISNFKERLIEWGVFSEEDAKAIDKNVRSKVNDEV 360 Query: 345 EFAQSDKEPDPAE--LYSDILI 364 A+ EPD L+ DI + Sbjct: 361 AEAEKMPEPDTKLDILFEDIYV 382 >gi|146299313|ref|YP_001193904.1| pyruvate dehydrogenase (acetyl-transferring) [Flavobacterium johnsoniae UW101] gi|146153731|gb|ABQ04585.1| Pyruvate dehydrogenase (acetyl-transferring) [Flavobacterium johnsoniae UW101] Length = 332 Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 150/319 (47%), Positives = 202/319 (63%), Gaps = 4/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM--KMSLTE 101 + E KE L Y MLL R+FE+K LY V GF HL GQEAV+ G M LT+ Sbjct: 1 MKEVTKEVYLKWYEDMLLWRKFEDKLAALYIQQKVRGFLHLYNGQEAVLAGALHAMDLTK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MITAYR H + GVD +MAEL G+ G SKG GGSMH+FS ++GFYGGHGIVG Sbjct: 61 -DKMITAYRNHVQPIGMGVDPRNVMAELLGKATGTSKGMGGSMHIFSKEHGFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 AQ+ +G GIAFA+KY + + + FGDGAA QG ++E+FN+A LW L V++++ENN YA Sbjct: 120 AQIPVGAGIAFADKYFNTGGVTMTYFGDGAARQGSLHEAFNMAMLWKLPVVFIVENNGYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV R + T+ K G+ + +P VDGM+ V M +A+ R GP +EM T Sbjct: 180 MGTSVERTANHTDIWKLGLGYEMPCGPVDGMNPVKVAEAMHEAIERARRGDGPTFLEMKT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD YR++EE+ E + DPI QV +L K+A+ +++ I+ V+ ++ Sbjct: 240 YRYRGHSMSDAQLYRSKEEVEEYKKI-DPITQVLDVILDQKYATAEEIEVIDQRVKDLVE 298 Query: 342 NSVEFAQSDKEPDPAELYS 360 +FA+ PD +LY Sbjct: 299 ECAKFAEESPYPDLQQLYD 317 >gi|195115126|ref|XP_002002115.1| GI14124 [Drosophila mojavensis] gi|193912690|gb|EDW11557.1| GI14124 [Drosophila mojavensis] Length = 420 Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 147/314 (46%), Positives = 209/314 (66%), Gaps = 7/314 (2%) Query: 51 QELSAY-RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 QE + Y + +L IRR E + QLY +V GFCHL GQEA VG+ +L + D ++ Y Sbjct: 82 QEAALYMKQLLAIRRLEAASAQLYKERLVRGFCHLSTGQEACAVGLCSALRKEDNLVAGY 141 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R HG G A +++ELTG+ G ++GKGGSMHM++ FYGG+GIVGAQVSLG G Sbjct: 142 RIHGLAYLMGATAKGVLSELTGKASGCAQGKGGSMHMYAPN--FYGGNGIVGAQVSLGAG 199 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 IA ANKYR + +C +GDGAANQGQ++E FN+A LW L +++V ENN Y MGTS R+ Sbjct: 200 IALANKYRGTGGVCFALYGDGAANQGQIFECFNMAKLWKLPIVFVCENNNYGMGTSAWRS 259 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 S+ T++ RG F +PG+ VDG D+ AV++ AV Y + +GP+++E+ TYRY GHSM Sbjct: 260 SSNTDYYTRG-DF-LPGIWVDGQDVLAVRSATRFAVQYAQ-QRGPLVMELCTYRYAGHSM 316 Query: 290 SDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 SDP +YRTREE+N++R DPI + RK L +E L+ I+ +VR+ + +++ A+ Sbjct: 317 SDPGTSYRTREEVNQVRQRQDPINRFRKVCLDMSLLTEKQLRIIDQSVREEMEQAIQTAR 376 Query: 349 SDKEPDPAELYSDI 362 D+E + L +D+ Sbjct: 377 HDEELPLSHLANDV 390 >gi|186685632|ref|YP_001868828.1| dehydrogenase, E1 component [Nostoc punctiforme PCC 73102] gi|186468084|gb|ACC83885.1| dehydrogenase, E1 component [Nostoc punctiforme PCC 73102] Length = 344 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 143/324 (44%), Positives = 212/324 (65%), Gaps = 9/324 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG- 102 ++ KE+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ S+ G Sbjct: 14 TTQITKEEGLWLYEDMVLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVCTGVVQSMRPGE 73 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS ++ GG+ V Sbjct: 74 DYVCSTYRDHVHALSAGVPAREVMAELFGKATGCSKGRGGSMHMFSAEHRLLGGYAFVAE 133 Query: 163 QVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + + G AF +KYRR +D++ FGDGAAN GQ +E+ N+AALW L +++V+ Sbjct: 134 GIPVAAGAAFQSKYRREVLGDKNADQVTACFFGDGAANNGQFFETLNMAALWKLPILFVV 193 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENN++A+G S RA++Q K+ +FN+ G++VDGMD+ AV+A +AVA RA +GP Sbjct: 194 ENNKWAIGMSHERATSQPEIYKKASAFNMVGVEVDGMDVLAVRAVAQEAVARARAGEGPT 253 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +IE LTYR+RGHS++DP R++ E E DPI+++ LL A+EG++K I+ Sbjct: 254 LIEALTYRFRGHSLADPDEMRSKAE-KEFWFARDPIKKLAAYLLEQNLANEGEIKAIDRK 312 Query: 336 VRKIINNSVEFAQSDKEPDPAELY 359 ++ +I+ +V+FA+S EPDP+ELY Sbjct: 313 IQDVIDEAVKFAESSPEPDPSELY 336 >gi|307105566|gb|EFN53815.1| hypothetical protein CHLNCDRAFT_56254 [Chlorella variabilis] Length = 325 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 149/305 (48%), Positives = 200/305 (65%), Gaps = 3/305 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M +RR E A LY + GFCHL GQEAV+VGM+ +L + D +IT+YR+H H + Sbjct: 1 MYRLRRMEISADMLYKAKQIRGFCHLYDGQEAVVVGMEAALEQSDSVITSYRDHAHFVGR 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G ++ AEL GR G SKGKGGSMHM+ + F+GG GIVGAQV LG G+A A+++R Sbjct: 61 GGTVLEVFAELMGRVEGASKGKGGSMHMYRRQANFFGGQGIVGAQVPLGAGLALAHQFRG 120 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + V +GDGAA QGQ++ESFN+AALW+L I+V ENN Y MGT+ RA+ F R Sbjct: 121 DGGVAVTMYGDGAAQQGQIFESFNMAALWDLPCIFVCENNHYGMGTAEWRAAKSPAFYTR 180 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRT 297 G +PGM DGMD+ AVK A Y KGP+I+EM TYRY GHSMSDP + YRT Sbjct: 181 GGD-TMPGMSCDGMDVLAVKQAFAFAKQYV-LEKGPLILEMDTYRYHGHSMSDPGSTYRT 238 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 R+EI+ +R+ DPIE+VR+ L N A +LK IE V+ I+ +++ A++ + P E Sbjct: 239 RDEISGIRAKRDPIERVRQLLAANGLAESSELKAIEREVKGEIDGAIDDAKAARLPADEE 298 Query: 358 LYSDI 362 L+++I Sbjct: 299 LWTNI 303 >gi|19115804|ref|NP_594892.1| pyruvate dehydrogenase e1 component alpha subunit Pda1 [Schizosaccharomyces pombe 972h-] gi|1709451|sp|Q10489|ODPA_SCHPO RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|1314172|emb|CAA97360.1| pyruvate dehydrogenase e1 component alpha subunit Pda1 [Schizosaccharomyces pombe] Length = 409 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 155/334 (46%), Positives = 207/334 (61%), Gaps = 11/334 (3%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 +D+P E E K + L Y M+ IRR E LY + GFCHL IGQEAV Sbjct: 64 IDVPSTE----IEVTKGELLGLYEKMVTIRRLELACDALYKAKKIRGFCHLSIGQEAVAA 119 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G++ ++T D +IT+YR HG G+ I+ EL GRQ G SKGKGGSMH+F+ KN F Sbjct: 120 GIEGAITLDDSIITSYRCHGFAYTRGLSIRSIIGELMGRQCGASKGKGGSMHIFA-KN-F 177 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 YGG+GIVGAQ+ LG GI FA KY +GDGA+NQGQ +E+FN+A LW L VI+ Sbjct: 178 YGGNGIVGAQIPLGAGIGFAQKYLEKPTTTFALYGDGASNQGQAFEAFNMAKLWGLPVIF 237 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 ENN+Y MGTS R+SA T F KRG IPG+ V+GMD+ AV A Y + Sbjct: 238 ACENNKYGMGTSAERSSAMTEFYKRGQY--IPGLLVNGMDVLAVLQASKFAKKYTVENSQ 295 Query: 274 PIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P+++E +TYRY GHSMSDP YR+REE+ ++R+ DPIE ++K ++ A+ +LK I Sbjct: 296 PLLMEFVTYRYGGHSMSDPGTTYRSREEVQKVRAARDPIEGLKKHIMEWGVANANELKNI 355 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAE--LYSDILI 364 E +R +++ V A+ PDP E L+SD+ + Sbjct: 356 EKRIRGMVDEEVRIAEESPFPDPIEESLFSDVYV 389 >gi|50556534|ref|XP_505675.1| YALI0F20702p [Yarrowia lipolytica] gi|49651545|emb|CAG78484.1| YALI0F20702p [Yarrowia lipolytica] Length = 394 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 149/323 (46%), Positives = 209/323 (64%), Gaps = 8/323 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K + L Y+ M+ +RR E A LY + GFCHL GQEAV VG++ ++ D + Sbjct: 55 EMTKGELLQMYKDMVTVRRLEMAADALYKAKKIRGFCHLSTGQEAVAVGIEKAIDHDDSV 114 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG G I+AEL G++ G+S GKGGSMHMF+ GFYGG+GIVGAQV Sbjct: 115 ITAYRCHGFAYMRGASVRAIIAELLGKRTGVSYGKGGSMHMFT--EGFYGGNGIVGAQVP 172 Query: 166 LGTGIAFANKY-RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +G G+AFA+KY ++ K +GDGA+NQGQ++E++N+A LW+L I+ ENN+Y MGT Sbjct: 173 VGAGLAFAHKYLEQTGKATFALYGDGASNQGQIFEAYNMAKLWDLPCIFACENNKYGMGT 232 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + +R+SA T + KRG IPG++V+GMDI +V A + KGP+++E TYRY Sbjct: 233 AAARSSALTQYYKRGQ--YIPGLKVNGMDILSVYQGAKFAKEWTTHGKGPLVMEFETYRY 290 Query: 285 RGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHSMSDP YRTREEI MRS++DPI ++ +L +A+E +LK ++ R +++ Sbjct: 291 GGHSMSDPGTTYRTREEIQYMRSHNDPISGLKAHILELNFATEDELKSVDKAARAMVDKE 350 Query: 344 VEFAQSDKEPDPAE--LYSDILI 364 V A+SD P+ L+ DI + Sbjct: 351 VALAESDPAPEATAKVLFEDIYV 373 >gi|321271259|gb|ADW79432.1| pyruvate dehydrogenase e1 alpha subunit [Pichia ciferrii] Length = 338 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 148/312 (47%), Positives = 204/312 (65%), Gaps = 7/312 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M++IRR E + LY + GFCHL +GQEA+ VG++ ++T+ D +IT+YR HG Sbjct: 2 YKEMIIIRRMEMASDALYKAKKIRGFCHLSVGQEAIAVGIENAITKKDSVITSYRCHGFT 61 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 G ++ EL GR+ G+S GKGGSMHM++T GFYGG+GIVGAQV LG G+AFA+K Sbjct: 62 YMRGSPVKDVLGELMGRRCGVSYGKGGSMHMYTT--GFYGGNGIVGAQVPLGAGLAFAHK 119 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 YR D +GDGAANQGQV+ES+N+A LWNL I+ ENN+Y MGTS +R+SA T++ Sbjct: 120 YRNEDNCSFTLYGDGAANQGQVFESYNMAKLWNLPCIFACENNKYGMGTSAARSSALTDY 179 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-AN 294 KRG IPG++V+GMD+ A A + + GP+++E TYRY GHSMSDP Sbjct: 180 YKRGQY--IPGLKVNGMDVLASYQASKFAKDWAISGNGPLVLEYETYRYGGHSMSDPGTT 237 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRTREEI MRS +DPI ++ LL A+E ++K + R ++ VE A + P+ Sbjct: 238 YRTREEIQHMRSRNDPIAGLKATLLELGIATEEEIKSYDKAARSYVDEQVELADASPAPE 297 Query: 355 P--AELYSDILI 364 + L+ DI + Sbjct: 298 AKMSILFEDIYV 309 >gi|86133706|ref|ZP_01052288.1| pyruvate dehydrogenase E1 component, alpha subunit [Polaribacter sp. MED152] gi|85820569|gb|EAQ41716.1| pyruvate dehydrogenase E1 component, alpha subunit [Polaribacter sp. MED152] Length = 329 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 146/319 (45%), Positives = 201/319 (63%), Gaps = 4/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM--KMSLTE 101 + + KE L Y+ ML R+FE+K +Y V GF HL GQEA++ G M L++ Sbjct: 1 MKKITKETYLDWYKNMLFWRKFEDKLASVYIQQKVRGFLHLYNGQEAILAGALHAMDLSK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MITAYR H + G D K+MAEL G+ G SKG GGSMH+FS + GFYGGHGIVG Sbjct: 61 -DKMITAYRNHVQPIGMGEDPKKVMAELYGKATGTSKGMGGSMHIFSKEFGFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG GIAFA+KY+ SD + + CFGDGAA QG ++E+FN+A LW L VI++ ENN YA Sbjct: 120 GQIPLGAGIAFADKYKGSDGVTLTCFGDGAARQGSLHEAFNLAMLWKLPVIFICENNGYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV R + T+ K G+ + +P VD M+ V +D+A+ R GP +EM T Sbjct: 180 MGTSVERTANHTDIWKLGLGYEMPCGPVDAMNPIKVAEAIDEALQRARRGDGPTFLEMKT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD +YRT++E+ E + DPI QV+ + +A+E ++ I+ V+ ++ Sbjct: 240 YRYRGHSMSDAQHYRTKDEVEEYKKI-DPITQVKDVIFEKGYATEDEISAIDKEVKAMVK 298 Query: 342 NSVEFAQSDKEPDPAELYS 360 +FA P+ +LY Sbjct: 299 ECEKFADESPYPETQQLYD 317 >gi|254579515|ref|XP_002495743.1| ZYRO0C02024p [Zygosaccharomyces rouxii] gi|238938634|emb|CAR26810.1| ZYRO0C02024p [Zygosaccharomyces rouxii] Length = 401 Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 150/315 (47%), Positives = 205/315 (65%), Gaps = 7/315 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L ++ M IRR E LY + GFCHL +GQEA+ VG++ ++T+ D +IT+YR H Sbjct: 63 LQMFKDMTTIRRMEMACDALYKAKKIWGFCHLSVGQEAIAVGIENAITKKDTVITSYRCH 122 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G G I+AEL G++ G S GKGGSMH+F+ NGFYGG+GIVGAQV LG G+AF Sbjct: 123 GFAHMRGSPVKDILAELMGKKSGCSFGKGGSMHIFT--NGFYGGNGIVGAQVPLGAGLAF 180 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A++Y+ D +GDGAANQGQV+ES+N+A L+NL V++ ENN+Y MGT+ SRASA Sbjct: 181 AHQYKNEDNCNFALYGDGAANQGQVFESYNMAKLFNLPVVFCCENNRYGMGTAASRASAS 240 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T + KR + IPG++V+GMDI AV A +C + GP+++E TYRY GHS+SDP Sbjct: 241 TEYFKR--AGYIPGLKVNGMDILAVYQASKFAKDWCLSGNGPLVLEYETYRYGGHSISDP 298 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 YRTREEI MRS +DPI ++ +L A+E +LK E RK ++ VE A S Sbjct: 299 GTTYRTREEIQHMRSKNDPIAGLKMHMLQLGLATEEELKAYEKAARKYVDEQVELADSSA 358 Query: 352 EP--DPAELYSDILI 364 P +P ++ D+ + Sbjct: 359 APGYEPELMFEDVYL 373 >gi|320160830|ref|YP_004174054.1| putative pyruvate dehydrogenase E1 component alpha subunit [Anaerolinea thermophila UNI-1] gi|319994683|dbj|BAJ63454.1| putative pyruvate dehydrogenase E1 component alpha subunit [Anaerolinea thermophila UNI-1] Length = 319 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 135/316 (42%), Positives = 204/316 (64%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K++ YR M++IRR EE++ +LY G +GGF HL IGQEAV G+ + D++ITA Sbjct: 3 KDEYFRMYREMVVIRRLEERSAELYQQGKIGGFLHLYIGQEAVSTGLISARKPQDRVITA 62 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HG + CG+ A ++MAEL G+ G SKGKGGSMH+ F+GGH IVGA + + T Sbjct: 63 YRDHGVAINCGLSAREVMAELLGKATGCSKGKGGSMHLADVTKNFWGGHAIVGAHLPIAT 122 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A + Y+ + + FGDGA N G +E+ N++ +WNL V++V ENNQY MGT+V R Sbjct: 123 GLALGDAYKGEKNVTICMFGDGATNIGFFHEALNMSKIWNLPVLWVCENNQYGMGTAVER 182 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASA + ++ ++ +P +VDGMD+ A++ ++ + R GP+++E +TYR+RGHS Sbjct: 183 ASAVSEIIQKAQAYAMPSRRVDGMDVMAMRQAAEEMIEAIRNGAGPMLMEAMTYRFRGHS 242 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 M DP YR EE++ + N DPI RK L N A+E +L +++ I+ ++V+FA+ Sbjct: 243 MGDPERYRKPEEVHRYQEN-DPIGIFRKYLQENGIATEEELNQLDDEAEAIVEDAVQFAE 301 Query: 349 SDKEPDPAELYSDILI 364 + EP P EL+ I + Sbjct: 302 ASPEPQPHELFEHIYV 317 >gi|315045027|ref|XP_003171889.1| pyruvate dehydrogenase E1 component subunit alpha [Arthroderma gypseum CBS 118893] gi|311344232|gb|EFR03435.1| pyruvate dehydrogenase E1 component subunit alpha [Arthroderma gypseum CBS 118893] Length = 405 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 158/347 (45%), Positives = 218/347 (62%), Gaps = 21/347 (6%) Query: 35 DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 D PF E FE E + K++ Y M+ IRR E A +LY + G Sbjct: 44 DKPFSVKLSDESFETYELDPPPYTLKTTKKELKQMYYDMVSIRRMEMAADRLYKEKKIRG 103 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEAV G++ ++T D++ITAYR HG + G I+ EL GR+ GI+ GK Sbjct: 104 FCHLSTGQEAVATGIEHAITPDDKLITAYRCHGFAMMRGGTVRSIIGELLGRREGIAYGK 163 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMF+ KN F+GG+GIVGAQV +G G+AFA +Y V +GDGA+NQGQV+E+ Sbjct: 164 GGSMHMFA-KN-FFGGNGIVGAQVPVGAGLAFAQQYNGEANTTVCLYGDGASNQGQVFEA 221 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A LWNL V++ ENN+Y MGT+ +R+SA T++ KRG IPG++V+GMD+ A+KA Sbjct: 222 FNMAKLWNLPVMFGCENNKYGMGTAANRSSALTDYYKRGQY--IPGIKVNGMDVLAIKAA 279 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 + Y + +GP++ E +TYRY GHSMSDP YRTREEI MRS +DPI ++++LL Sbjct: 280 VQYGREYTVSGQGPLVFEYVTYRYGGHSMSDPGTTYRTREEIQRMRSTNDPIAGLKQKLL 339 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE--LYSDILI 364 SE +LK I+ + R +++ V A+ PD L+ DI + Sbjct: 340 DWNITSEEELKAIDKDARSMVDEEVAIAEKMPVPDATSRILFEDIYV 386 >gi|328725071|ref|XP_001949530.2| PREDICTED: probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like, partial [Acyrthosiphon pisum] Length = 341 Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 145/292 (49%), Positives = 194/292 (66%), Gaps = 5/292 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E + Y+ M IRR E AG LY +V GFCHL GQEA VGMK + D +I Sbjct: 52 LSSEDAIKYYKQMQTIRRIETAAGNLYKEKIVRGFCHLYSGQEACAVGMKAMFRDTDSII 111 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG GVD +++ELTGR+ G ++GKGGSMHM++ KN FYGG+GIVGAQV L Sbjct: 112 TAYRAHGWTYLMGVDPFNVLSELTGRKSGNARGKGGSMHMYA-KN-FYGGNGIVGAQVPL 169 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIA A KY + +C +GDGAANQGQV+E++N++ LW++ V+YV ENN Y MGTS Sbjct: 170 GAGIALAAKYLGTGGVCFTLYGDGAANQGQVFEAYNMSKLWDIPVVYVCENNGYGMGTSS 229 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA + RG IPG+ VDGMD+ AV+ A+ YC + KGP+++E TYRY G Sbjct: 230 ERASASVAYYTRGDY--IPGIWVDGMDVLAVREAARFAIDYCTSGKGPLVLETATYRYSG 287 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 HSMSDP +YRTR+EI E+R DPI +++++ + +LK+I+ ++ Sbjct: 288 HSMSDPGTSYRTRDEIQEVRQTRDPITSFKEKIIGANLVNIDELKQIDKEIK 339 >gi|221633706|ref|YP_002522932.1| TPP-dependent acetoin dehydrogenase subunit alpha [Thermomicrobium roseum DSM 5159] gi|221157060|gb|ACM06187.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Thermomicrobium roseum DSM 5159] Length = 337 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 136/310 (43%), Positives = 195/310 (62%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K + L YRLM+LIRRFEE A + Y +G + GF HL IG+EAV VG ++ D ++T Sbjct: 16 KSELLEMYRLMVLIRRFEEVAAEQYALGKIAGFLHLYIGEEAVAVGAIRAMDPDDHLVTH 75 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HG+ LA G+D + MAEL G+ G+ G+GGSMH F+GG+ IV + + Sbjct: 76 YRDHGYALALGLDPRRCMAELFGKATGLVGGRGGSMHFADASKHFWGGYAIVAGLLPIAA 135 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+ A+KY ++ V FGDGA N G +E+ N AALW L V+++ ENNQY MGT+V Sbjct: 136 GLGLASKYLNQRRVAVAIFGDGATNNGAFHEALNFAALWKLPVLFLCENNQYGMGTAVQY 195 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASA ++ +++IP +VDG D+ AV +A+ +CR+ GP +E LTYRYRGHS Sbjct: 196 ASAVREMYRKACAYDIPAERVDGQDVLAVYEATKRALEHCRSGNGPYFLEALTYRYRGHS 255 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 M+DP YR++EE+ E R + DPIE+ R++LL + A+ +L ++ V + + +V FA Sbjct: 256 MADPETYRSKEEVEEWRRHRDPIERFRQQLLAHNVATPEELAALDQAVEEAVAEAVRFAD 315 Query: 349 SDKEPDPAEL 358 EPDP L Sbjct: 316 ESPEPDPETL 325 >gi|324510505|gb|ADY44393.1| Pyruvate dehydrogenase E1 component subunit alpha type II [Ascaris suum] gi|324510629|gb|ADY44445.1| Pyruvate dehydrogenase E1 component subunit alpha type II [Ascaris suum] Length = 445 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 147/316 (46%), Positives = 202/316 (63%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++ L+ Y M IRR E AG LY + GFCHL G+EA VG+K ++ D +IT Sbjct: 58 TRDDALNIYTRMQTIRRLEAAAGNLYKEQKIRGFCHLYAGEEACAVGIKSAMEPNDAIIT 117 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR HG CG ++ ELTGR G GKGGSMHM+ + FYGG+GIVGAQ LG Sbjct: 118 SYRCHGWTYLCGPSVVPVLCELTGRMNGNVHGKGGSMHMYG--DNFYGGNGIVGAQQPLG 175 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA K R+ +C FGDGAANQGQ++ES NIA LWN+ V+YV ENN Y GTS Sbjct: 176 TGVAFAMKCRKMKNVCFTLFGDGAANQGQLFESMNIAKLWNIPVVYVCENNGYGFGTSTK 235 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RA A ++ R VS+ +PG+ VDGMD+ AV+ A +C A KGP+++EM TYRY GH Sbjct: 236 RACAAKHYYDR-VSY-MPGVWVDGMDVLAVREAARWAKEWCNAGKGPLMLEMSTYRYGGH 293 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 S++DP +YRTREE+ E+R D I +++++ +E +LKEI+ +RK ++ + + Sbjct: 294 SVADPGTSYRTREEVEEVRRTRDAINGFKEKVIPTGLLTEDELKEIDKKIRKEVDEAAKM 353 Query: 347 AQSDKEPDPAELYSDI 362 A++ KE L +D+ Sbjct: 354 ARTGKEATTDLLLTDL 369 >gi|330752049|emb|CBL80560.1| pyruvate dehydrogenase E1 component subunit alpha [uncultured Flavobacteria bacterium] gi|330752170|emb|CBL87129.1| pyruvate dehydrogenase E1 component alpha subunit [uncultured Flavobacteria bacterium] Length = 331 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 135/307 (43%), Positives = 197/307 (64%), Gaps = 1/307 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L Y ML R+FE+ + LY + GF HL GQEA++ G ++ +GD+MITAYR H Sbjct: 12 LKWYEDMLFWRKFEDMSAALYIQQKIRGFLHLYNGQEAILAGSAFAMEKGDKMITAYRNH 71 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 +A G D +IMAEL G+ G S+GKGGSMHMFS K+GF+GGHGIVG Q+ LG G+AF Sbjct: 72 VQPMALGEDPRRIMAELMGKVTGTSRGKGGSMHMFSPKHGFWGGHGIVGGQIPLGAGLAF 131 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+KY + + + GDGA QG +E+ N+A LW + V++++ENN YAMGTSV R + Sbjct: 132 ADKYNGKNNVTLTYMGDGAIRQGAWHEAANLAMLWKIPVVFIVENNGYAMGTSVERTANH 191 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T+ K G +++P VDGMD AV + +A+ R +GP ++E+ TYRY+GHSMSDP Sbjct: 192 TSIHKLGEGYDMPNRAVDGMDPIAVYDAVHEAMERARGGEGPTLLEIRTYRYKGHSMSDP 251 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR+++E+ E ++ DPI ++ WA++ ++ I V+ ++ V+F + Sbjct: 252 QKYRSKQEVAEYQAK-DPITLCLNKIKEKNWATQDEIDAINQRVKDLVKECVDFGEKSDF 310 Query: 353 PDPAELY 359 PDP+E+Y Sbjct: 311 PDPSEVY 317 >gi|254569568|ref|XP_002491894.1| E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex [Pichia pastoris GS115] gi|238031691|emb|CAY69614.1| E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex [Pichia pastoris GS115] gi|328351607|emb|CCA38006.1| pyruvate dehydrogenase E1 component subunit alpha [Pichia pastoris CBS 7435] Length = 396 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 153/351 (43%), Positives = 219/351 (62%), Gaps = 16/351 (4%) Query: 26 AATSSVDCVDIPF--LEGFEVS-------EFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 +A+ S +D+P E +E+ E KE L Y+ M+++RR E + LY Sbjct: 23 SASPSTVSIDLPASSFETYELEQGPELQFETEKETLLQMYKQMVIVRRMEMASDALYKAK 82 Query: 77 MVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGI 136 + GFCHL +GQEAV VG++ ++T+ D +IT+YR HG G ++ EL G++ G+ Sbjct: 83 KIRGFCHLSVGQEAVAVGIESAITKKDTVITSYRCHGFTYLRGASVKEVQGELMGKRCGV 142 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 S GKGGSMHMF+T GFYGG+GIVGAQV +G G+AFA++YR +GDGA+NQGQ Sbjct: 143 SYGKGGSMHMFTT--GFYGGNGIVGAQVPVGAGLAFAHQYRNEKNCTFALYGDGASNQGQ 200 Query: 197 VYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA 256 V+ESFN+A LW+L VI+ ENN+Y MGTS SR+SA T + KRG F IPG++V+GMD+ A Sbjct: 201 VFESFNMAKLWDLPVIFACENNKYGMGTSASRSSAMTEYYKRG-QF-IPGLKVNGMDVLA 258 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVR 315 A + + GP+++E TYRY GHSMSDP YRTREE+ MRS +DPI ++ Sbjct: 259 CYQASKFAKDWTVSGNGPLVMEYETYRYGGHSMSDPGTTYRTREEVQNMRSRNDPIAGLK 318 Query: 316 KRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE--LYSDILI 364 L+ ++E +LK + RK ++ + A+ P+ L+ D+ + Sbjct: 319 MHLIELGISTEEELKAYDKEARKYVDKQTKEAELAPPPEAKMDILFEDVYV 369 >gi|195565105|ref|XP_002106146.1| GD16702 [Drosophila simulans] gi|194203518|gb|EDX17094.1| GD16702 [Drosophila simulans] Length = 392 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 148/318 (46%), Positives = 206/318 (64%), Gaps = 13/318 (4%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K+Q L Y M IRR E AG LY ++ GFCHL GQEA VGMK ++ + D + Sbjct: 59 KLTKDQALKYYTQMQTIRRLETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNI 118 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 I+AYR HG GV S ++AELTG QGG ++GKGGSMHM++ FYGG+GIVGAQV Sbjct: 119 ISAYRVHGWTYLMGVSPSGVLAELTGVQGGCARGKGGSMHMYAPN--FYGGNGIVGAQVP 176 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+ A KY+ + +C+ +GDGAANQGQV+E++N+A LW L VI+V ENN YA Sbjct: 177 LGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEAYNMAYLWKLPVIFVCENNNYA---- 232 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S T++ RG + +PG+ VDGMD+ AV++ + A+ Y H GP+++E TYRY Sbjct: 233 ---CSCNTDYYTRGDA--LPGIWVDGMDVLAVRSATEFAINYVNTH-GPLVMETNTYRYS 286 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP +YRTREEI E+R DPI ++ + + ++K I++ VRK ++ + Sbjct: 287 GHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCIELGLITTDEVKAIDLKVRKEVDEAT 346 Query: 345 EFAQSDKEPDPAELYSDI 362 FA+SD E + L++D+ Sbjct: 347 AFAKSDAELGVSHLWTDV 364 >gi|324515184|gb|ADY46115.1| Pyruvate dehydrogenase E1 component subunit alpha type II [Ascaris suum] Length = 401 Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 147/316 (46%), Positives = 202/316 (63%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++ L+ Y M IRR E AG LY + GFCHL G+EA VG+K ++ D +IT Sbjct: 58 TRDDALNIYTRMQTIRRLEAAAGNLYKEQKIRGFCHLYAGEEACAVGIKSAMEPNDAIIT 117 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR HG CG ++ ELTGR G GKGGSMHM+ + FYGG+GIVGAQ LG Sbjct: 118 SYRCHGWTYLCGPSVVPVLCELTGRMNGNVHGKGGSMHMYG--DNFYGGNGIVGAQQPLG 175 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA K R+ +C FGDGAANQGQ++ES NIA LWN+ V+YV ENN Y GTS Sbjct: 176 TGVAFAMKCRKMKNVCFTLFGDGAANQGQLFESMNIAKLWNIPVVYVCENNGYGFGTSTK 235 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RA A ++ R VS+ +PG+ VDGMD+ AV+ A +C A KGP+++EM TYRY GH Sbjct: 236 RACAAKHYYDR-VSY-MPGVWVDGMDVLAVREAARWAKEWCNAGKGPLMLEMSTYRYGGH 293 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 S++DP +YRTREE+ E+R D I +++++ +E +LKEI+ +RK ++ + + Sbjct: 294 SVADPGTSYRTREEVEEVRRTRDAINGFKEKIIPTGLLTEDELKEIDKKIRKEVDEAAKM 353 Query: 347 AQSDKEPDPAELYSDI 362 A++ KE L +D+ Sbjct: 354 ARTGKEATTDLLLTDL 369 >gi|158290247|ref|XP_311846.4| AGAP003030-PA [Anopheles gambiae str. PEST] gi|157017802|gb|EAA07828.4| AGAP003030-PA [Anopheles gambiae str. PEST] Length = 393 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 143/318 (44%), Positives = 207/318 (65%), Gaps = 6/318 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K++ + YR M IRR E AG LY +V GFCHL GQEA VGMK ++ D + Sbjct: 52 KVTKDEAVKYYRQMQTIRRLETSAGNLYKEKLVRGFCHLYSGQEACAVGMKGAMRPQDNI 111 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 I+AYR HG GV ++ EL G+QGG ++GKGGSMHM++ FYGG+GIVGAQV Sbjct: 112 ISAYRVHGWTYLMGVSPQGVLCELAGKQGGCARGKGGSMHMYAPN--FYGGNGIVGAQVP 169 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+A A KY+ ++ +C+ +GDGAANQGQ++E++N+A LW L I+V ENN Y MGTS Sbjct: 170 LGAGVALACKYKGNEGVCLALYGDGAANQGQIFEAYNMAHLWKLPCIFVCENNGYGMGTS 229 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R S N+ +RG +PG+ VDGMD+ AV+ + A+ + + GP+++E+ TYRY Sbjct: 230 AERGSCNVNYYQRGDV--LPGIWVDGMDVVAVRLATEFAINHV-LNVGPVVMEVYTYRYS 286 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP +YRTREE+ E+R DPI + ++L + +LK ++ ++K ++ + Sbjct: 287 GHSMSDPGTSYRTREEVQEVRQTRDPISSFKDKILAAGLVTADELKAMDNQIKKEVDEAT 346 Query: 345 EFAQSDKEPDPAELYSDI 362 + A++D E EL +D+ Sbjct: 347 KQAKADAEIGLPELSTDV 364 >gi|324517093|gb|ADY46725.1| Pyruvate dehydrogenase E1 component subunit alpha type II [Ascaris suum] Length = 384 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 147/316 (46%), Positives = 202/316 (63%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++ L+ Y M IRR E AG LY + GFCHL G+EA VG+K ++ D +IT Sbjct: 58 TRDDALNIYTRMQTIRRLEAAAGNLYKEQKIRGFCHLYAGEEACAVGIKSAMEPNDAIIT 117 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR HG CG ++ ELTGR G GKGGSMHM+ + FYGG+GIVGAQ LG Sbjct: 118 SYRCHGWTYLCGPSVVPVLCELTGRMNGNVHGKGGSMHMYG--DNFYGGNGIVGAQQPLG 175 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA K R+ +C FGDGAANQGQ++ES NIA LWN+ V+YV ENN Y GTS Sbjct: 176 TGVAFAMKCRKMKNVCFTLFGDGAANQGQLFESMNIAKLWNIPVVYVCENNGYGFGTSTK 235 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RA A ++ R VS+ +PG+ VDGMD+ AV+ A +C A KGP+++EM TYRY GH Sbjct: 236 RACAAKHYYDR-VSY-MPGVWVDGMDVLAVREAARWAKEWCNAGKGPLMLEMSTYRYGGH 293 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 S++DP +YRTREE+ E+R D I +++++ +E +LKEI+ +RK ++ + + Sbjct: 294 SVADPGTSYRTREEVEEVRRTRDAINGFKEKVIPTGLLTEDELKEIDKKIRKEVDEAAKM 353 Query: 347 AQSDKEPDPAELYSDI 362 A++ KE L +D+ Sbjct: 354 ARTGKEATTDLLLTDL 369 >gi|324511699|gb|ADY44863.1| Pyruvate dehydrogenase E1 component subunit alpha type II [Ascaris suum] Length = 434 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 147/316 (46%), Positives = 202/316 (63%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++ L+ Y M IRR E AG LY + GFCHL G+EA VG+K ++ D +IT Sbjct: 47 TRDDALNIYTRMQTIRRLEAAAGNLYKEQKIRGFCHLYAGEEACAVGIKSAMEPNDAIIT 106 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR HG CG ++ ELTGR G GKGGSMHM+ + FYGG+GIVGAQ LG Sbjct: 107 SYRCHGWTYLCGPSVVPVLCELTGRMNGNVHGKGGSMHMYG--DNFYGGNGIVGAQQPLG 164 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA K R+ +C FGDGAANQGQ++ES NIA LWN+ V+YV ENN Y GTS Sbjct: 165 TGVAFAMKCRKMKNVCFTLFGDGAANQGQLFESMNIAKLWNIPVVYVCENNGYGFGTSTK 224 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RA A ++ R VS+ +PG+ VDGMD+ AV+ A +C A KGP+++EM TYRY GH Sbjct: 225 RACAAKHYYDR-VSY-MPGVWVDGMDVLAVREAARWAKEWCNAGKGPLMLEMSTYRYGGH 282 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 S++DP +YRTREE+ E+R D I +++++ +E +LKEI+ +RK ++ + + Sbjct: 283 SVADPGTSYRTREEVEEVRRTRDAINGFKEKIIPTGLLTEDELKEIDKKIRKEVDEAAKM 342 Query: 347 AQSDKEPDPAELYSDI 362 A++ KE L +D+ Sbjct: 343 ARTGKEATTDLLLTDL 358 >gi|119496391|ref|XP_001264969.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Neosartorya fischeri NRRL 181] gi|119413131|gb|EAW23072.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Neosartorya fischeri NRRL 181] Length = 405 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 149/322 (46%), Positives = 209/322 (64%), Gaps = 7/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K++ Y M++ RR E A +LY + GFCHL IGQEAV G++ ++T D++ Sbjct: 69 EVTKKELKQMYYDMVVTRRMEMAADRLYKEKKIRGFCHLSIGQEAVATGIEHAITRDDKV 128 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG+ L G I+ EL GR+ GI+ GKGGSMHMF+ F+GG+GIVGAQV Sbjct: 129 ITAYRCHGYALMRGGTVRSIIGELLGRREGIAYGKGGSMHMFAPN--FFGGNGIVGAQVP 186 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+AFA +Y +V +GDGA+NQGQV+E+FN+A LW L I+ ENN+Y MGTS Sbjct: 187 VGAGLAFAQQYNEEKATSIVLYGDGASNQGQVFEAFNMAKLWKLPAIFGCENNKYGMGTS 246 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +R+SA T++ KRG IPG++V+GMD+ A KA + A Y A GP++ E +TYRY Sbjct: 247 AARSSALTDYYKRGQY--IPGIKVNGMDVLATKAAVQYAREYTIAGNGPLVFEYVTYRYG 304 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YR+REEI MRS +DPI +++++L +E +LK ++ + R ++ V Sbjct: 305 GHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKILDWNVMTEEELKALDKSARSHVDEEV 364 Query: 345 EFAQSDKEPD--PAELYSDILI 364 A+ P+ P L+ DI + Sbjct: 365 AIAEQMPAPENNPRILFEDIYV 386 >gi|195131189|ref|XP_002010033.1| GI14910 [Drosophila mojavensis] gi|193908483|gb|EDW07350.1| GI14910 [Drosophila mojavensis] Length = 399 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 153/343 (44%), Positives = 217/343 (63%), Gaps = 12/343 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF EG E + + K++ L Y M IRR E AG LY ++ G Sbjct: 34 ATEATVQVNRPFKLHRLEEGPETTVKLTKDEALKYYTQMQTIRRIETAAGNLYKEKIIRG 93 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV ++ ELTG Q G ++GK Sbjct: 94 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVPPLGVLGELTGVQSGCARGK 153 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+ F+GG+GIVGAQV LG G+A A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 154 GGSMHMYCPN--FFGGNGIVGAQVPLGAGVALACKYKGNGGMCLALYGDGAANQGQVFEA 211 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 212 YNMAYLWKLPVIFVCENNNYGMGTSAERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 269 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y +GP+++E TYRY GHSMSDP +YRTREEI E+R DPI ++ + Sbjct: 270 TEFAIKYVN-EQGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 328 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + ++K I++ VRK ++ + A++ E + L++D+ Sbjct: 329 ELGLITTDEVKAIDLKVRKEVDEATAQAKNGTELPVSHLWTDV 371 >gi|145498317|ref|XP_001435146.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124402276|emb|CAK67749.1| unnamed protein product [Paramecium tetraurelia] Length = 372 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 150/313 (47%), Positives = 198/313 (63%), Gaps = 4/313 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ Y+ M L RR E LY ++ GF HL GQE++ G+ LT D +ITAYR+H Sbjct: 42 LAYYKSMQLQRRMEIACDNLYKQRLIRGFLHLADGQESIYEGLHAGLTFDDCVITAYRDH 101 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L G +I+AE+ +Q G +KGKGGSMH + FYGGHGIVGAQ+ LGTG+AF Sbjct: 102 CIALLRGDTPHQIIAEMMAKQTGSTKGKGGSMHYYKKATNFYGGHGIVGAQIPLGTGLAF 161 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A KY + + ++ FGDGAANQGQ+YE+ N+A LW+L IY IENN + MGTS+ RASA Sbjct: 162 AQKYLKKPNVTLIMFGDGAANQGQLYEAANMAQLWHLPAIYFIENNLFGMGTSIDRASAN 221 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T F RG IPG+Q+DG ++ V+ T+ A +C KGPI IE +TYRY GHSMSDP Sbjct: 222 TKFYTRGDV--IPGIQIDGNNVFQVRETLKFAKKHC-LEKGPIFIEAMTYRYHGHSMSDP 278 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 YRTREE+ + R D I V+ +L NK A E L+EI+ + I+ +VE A+ D Sbjct: 279 GVTYRTREEVQQQRKTRDCINYVKNIILENKVADEHQLEEIDNTAQNEIDIAVEQAKVDP 338 Query: 352 EPDPAELYSDILI 364 P EL +D+ + Sbjct: 339 VPPSTELATDVYV 351 >gi|83596041|gb|ABC25399.1| pyruvate dehydrogenase E1 component, alpha subunit [uncultured marine bacterium Ant39E11] Length = 331 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 140/310 (45%), Positives = 198/310 (63%), Gaps = 1/310 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L Y M R+FE+ LY + GF HL GQEA++ G +++ +GD+MITAYR H Sbjct: 12 LKWYEDMSFWRKFEDMCSALYIQQKIRGFLHLYNGQEAILAGSLLAMNKGDKMITAYRNH 71 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 + GVD ++MAEL GR G S+GKGGSMH+FS ++ F+GGHGIVG Q+ LG GIAF Sbjct: 72 VQPIGLGVDPRRVMAELMGRVDGTSRGKGGSMHIFSKEHNFFGGHGIVGGQIPLGAGIAF 131 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+KY+ D + + GDGA QG ++E+FN+A LWNL V++++ENN YAMGTSV R + Sbjct: 132 ADKYQDKDHVTLTYMGDGATRQGALHETFNLAMLWNLPVVFIVENNGYAMGTSVERTANH 191 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + K G+ + +P VDGMD A + +AV R GP +E+ TYRY+GHSMSD Sbjct: 192 SEIWKLGLGYEMPCQAVDGMDPAITYAAIQEAVDRARNGGGPTFLEIRTYRYKGHSMSDA 251 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YRT+ E++E + DPI ++ LL KWA++ DL+ I+ V+ ++ VEFA + Sbjct: 252 QLYRTKGEVSEYQKV-DPILTSKEMLLKKKWATKEDLEVIDQRVKALVAECVEFASNSPF 310 Query: 353 PDPAELYSDI 362 P+ EL+ + Sbjct: 311 PEGHELFKHV 320 >gi|307199194|gb|EFN79881.1| Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial [Harpegnathos saltator] Length = 779 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 148/323 (45%), Positives = 210/323 (65%), Gaps = 6/323 (1%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E S +KE+ A R M IRR E +A LY + ++ GF HL GQEAV VG+KM++ + Sbjct: 447 EKSTLSKEEATYALRTMNYIRRMENRAADLYRLRLINGFLHLYTGQEAVAVGLKMAIHKE 506 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D +ITAYR H + + ++AEL GR+ G S+GKGGSMHM++ + FYGG GIVG Sbjct: 507 DTVITAYRCHSFAVVFDISVRAVLAELMGRKTGASQGKGGSMHMYAPR--FYGGDGIVGG 564 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV +GTGIA A+KY + + + +GDGAA+QGQ+YE++N+A LWNL V+Y+ ENN+Y M Sbjct: 565 QVPIGTGIALAHKYNSTGAVSITLYGDGAASQGQIYEAWNMAKLWNLPVVYICENNKYGM 624 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GT+V R SA T RG IPG++ DGM I V+ + A Y GPIIIE++TY Sbjct: 625 GTAVHRHSANTRLYTRGDL--IPGIKADGMKIVDVREAIRFARDYA-LRNGPIIIEVVTY 681 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP YRTREEI ++S DPI + ++ + +E ++++I + K ++ Sbjct: 682 RYFGHSMSDPGVGYRTREEIKSVQSEQDPIMLFNQLVVQKELMTEEEIEDIRKSTYKEVD 741 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 +VE AQ+D P+ EL +++ + Sbjct: 742 QAVEQAQADAWPEMTELATNVYV 764 >gi|225011574|ref|ZP_03702012.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Flavobacteria bacterium MS024-2A] gi|225004077|gb|EEG42049.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Flavobacteria bacterium MS024-2A] Length = 332 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 146/320 (45%), Positives = 205/320 (64%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG- 102 + + K+ L Y ML R+FE+K +Y V GF HL GQEAV+ G ++ G Sbjct: 1 MKKITKQTYLDWYENMLFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVLAGSLHAMEIGK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H + GVD ++MAEL G+ G S+G GGSMH+FS + F+GGHGIVG Sbjct: 61 DRMITAYRNHVQPIGMGVDPKRVMAELYGKATGTSQGLGGSMHIFSKEFKFHGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG G+AF +KY D + + GDGAA QG ++E+ N+A LW L V++V+ENN YAM Sbjct: 121 QIPLGAGMAFGDKYFDRDNVTLCFLGDGAARQGSLHETLNLAMLWELPVVFVVENNGYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV+R + K G+ +N+P DGMD AV TMDKA++ R+ GP IEM TY Sbjct: 181 GTSVARTANHEEIWKLGLGYNMPCEPCDGMDPVAVAKTMDKAISLARSGGGPSFIEMKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YRT+EE+ E R DPI QV++ +L K+A++ DL ++ ++++ + Sbjct: 241 RYRGHSMSDAQHYRTKEEVEEYRKI-DPISQVKEVILTKKYATQKDLDIVDKSIKERVLE 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 +FA+S PD + +Y + Sbjct: 300 CEKFAESSPYPDLSLMYDAV 319 >gi|298207675|ref|YP_003715854.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Croceibacter atlanticus HTCC2559] gi|83850312|gb|EAP88180.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Croceibacter atlanticus HTCC2559] Length = 333 Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 141/318 (44%), Positives = 204/318 (64%), Gaps = 2/318 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEG 102 + + K L Y ML R+FE+K Q+Y V GF HL GQEA++ G ++ T+ Sbjct: 1 MKKITKATYLKWYEDMLFWRKFEDKLAQVYIQQKVRGFLHLYNGQEAILAGTLHAMDTDK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D++ITAYR H + GVD ++MAEL G+ G S+G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 DRLITAYRNHVQPIGMGVDPKRVMAELYGKGTGTSQGLGGSMHIFSKEHRFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG G+AFA++Y D + + FGDGAA QG ++E+FN+A LWNL V++ +ENN YAM Sbjct: 121 QIPLGAGLAFADQYHDRDNVTITYFGDGAARQGSLHETFNLAMLWNLPVVFCVENNGYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV+R + T+ K G+ + +P VD M+ V M +A+ R GP +E+ TY Sbjct: 181 GTSVARTANHTDIWKLGLGYEMPCGPVDAMNPVKVAEAMSEAIERARTGGGPTFLELKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD YRT++E+ E + DPI QV++ +L K+A+E ++KEI+ V+ ++ Sbjct: 241 RYRGHSMSDAQKYRTKDEVAEYQKI-DPITQVKEIILDKKYATEDEVKEIDQRVKDLVKE 299 Query: 343 SVEFAQSDKEPDPAELYS 360 EFA++ P+ +Y Sbjct: 300 CEEFAENSDFPEKNVMYD 317 >gi|17230200|ref|NP_486748.1| pyruvate dehydrogenase E1 component, alpha subunit [Nostoc sp. PCC 7120] gi|75910474|ref|YP_324770.1| dehydrogenase, E1 component [Anabaena variabilis ATCC 29413] gi|17131801|dbj|BAB74407.1| pyruvate dehydrogenase E1 component, alpha subunit [Nostoc sp. PCC 7120] gi|75704199|gb|ABA23875.1| Dehydrogenase, E1 component [Anabaena variabilis ATCC 29413] Length = 344 Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 141/323 (43%), Positives = 211/323 (65%), Gaps = 9/323 (2%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ KE+ L Y M L R FE+K ++Y G + GF HL GQEAV G+ ++ G+ Sbjct: 15 AKITKEEGLLLYEDMTLGRFFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIQAMRPGED 74 Query: 105 MITA-YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +++ YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS ++G GG+ V Sbjct: 75 FVSSTYRDHVHALSAGVPAREVMAELFGKATGCSKGRGGSMHMFSAEHGLLGGYAFVAEG 134 Query: 164 VSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + + G AF +KYRR +D++ FGDGAAN GQ +E+ N+AALW L +I+V+E Sbjct: 135 IPVAAGAAFQSKYRREVLGDPNADQVTACFFGDGAANNGQFFETLNMAALWKLPIIFVVE 194 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN++A+G + RA++ K+ FN+ G++VDGMD+ AV+A +AVA RA +GP + Sbjct: 195 NNKWAIGMAHDRATSDPEIYKKASVFNMVGVEVDGMDVLAVRAVAQEAVARARAGEGPTL 254 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 IE LTYR+RGHS++DP R++ E E + DPI+++ L+ A E +LK IE + Sbjct: 255 IEALTYRFRGHSLADPDEMRSKAE-KEFWFSRDPIKKLAAYLIEQNLADEAELKAIERKI 313 Query: 337 RKIINNSVEFAQSDKEPDPAELY 359 + +I+++V+FA+S EPDP+ELY Sbjct: 314 QDVIDDAVKFAESSPEPDPSELY 336 >gi|164659800|ref|XP_001731024.1| hypothetical protein MGL_2023 [Malassezia globosa CBS 7966] gi|159104922|gb|EDP43810.1| hypothetical protein MGL_2023 [Malassezia globosa CBS 7966] Length = 322 Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 141/307 (45%), Positives = 206/307 (67%), Gaps = 5/307 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ +RR E + Q Y +V GFCHL IGQEAV VGM+ ++ D +ITAYR H ++ Sbjct: 1 MVKMRRMEVASDQAYKNKLVRGFCHLSIGQEAVSVGMETAIKPDDSLITAYRCHTFVVQR 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G S ++AEL GR+GG+S+GKGGSMH+++ FYGG+GIVGAQV LGTG+AFA KY + Sbjct: 61 GGSVSGMLAELFGREGGLSRGKGGSMHVYTPN--FYGGNGIVGAQVPLGTGLAFAQKYLK 118 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ +GDGA+NQGQV+ESFN+A LW L +++ ENN+Y MGTS R+S T F R Sbjct: 119 TNHATFTLYGDGASNQGQVFESFNMAKLWKLPNVFICENNKYGMGTSAERSSMNTQFYTR 178 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRT 297 G IPG+QV+ MD+ AVK + A Y + GP+++E++TYRY GHS+SDP YRT Sbjct: 179 GDV--IPGIQVNAMDVLAVKRGTEFAREYTVSGNGPLLMELVTYRYGGHSLSDPGTTYRT 236 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 R+EI +MRS+ DPI+ ++ ++ E +LK+++ ++ ++ +E A++ P + Sbjct: 237 RDEIQKMRSSSDPIQGLKTHIIEWGVMEESELKKVDKAAKEFVDKELEEAKNSPPPPEED 296 Query: 358 LYSDILI 364 LY + + Sbjct: 297 LYKHVYV 303 >gi|169863671|ref|XP_001838454.1| pyruvate dehydrogenase e1 component alpha subunit [Coprinopsis cinerea okayama7#130] gi|116500493|gb|EAU83388.1| pyruvate dehydrogenase e1 component alpha subunit [Coprinopsis cinerea okayama7#130] Length = 407 Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 148/321 (46%), Positives = 207/321 (64%), Gaps = 14/321 (4%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 K + L Y M ++RR E + LY ++ GFCHL GQEAV VG++ + + D++IT Sbjct: 74 TKSELLQMYSEMQVMRRMEMASDALYKAKLIRGFCHLATGQEAVSVGLEHGIKKDDRVIT 133 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR H + G ++AEL GRQ G+S GKGGSMH+F+ F+GG+GIVGAQV +G Sbjct: 134 GYRCHPFAVLRGGTVEGVIAELLGRQAGMSHGKGGSMHIFTPT--FFGGNGIVGAQVPVG 191 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G AFA KY+ +GDGA+NQGQV+E+FN+A LWNL ++V ENN+Y MGTS Sbjct: 192 AGAAFAQKYKGEKHCTFALYGDGASNQGQVFEAFNMAKLWNLPCVFVCENNKYGMGTSAE 251 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR-----AHKGPIIIEMLTY 282 R+S+ T + RG IPG+QV+GMDI A K +AV Y R KGP+I+E +TY Sbjct: 252 RSSSNTEYYTRGD--KIPGIQVNGMDIIATK----QAVEYARNWTVNDDKGPLILEFITY 305 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP YRTREE+ MRS DPI +++ L A+E +LK ++ + + +++ Sbjct: 306 RYGGHSMSDPGTTYRTREEVQRMRSTQDPIRGLQRYLEEWGVATEQELKALDKDAKAVVD 365 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 +VE A++ EP+ +L++DI Sbjct: 366 KAVEIAKASPEPEIKDLWTDI 386 >gi|47575710|ref|NP_001001197.1| pyruvate dehydrogenase E1 alpha 1 isoform 1 [Xenopus (Silurana) tropicalis] gi|45501260|gb|AAH67306.1| pyruvate dehydrogenase (lipoamide) alpha 1 [Xenopus (Silurana) tropicalis] Length = 369 Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 156/339 (46%), Positives = 212/339 (62%), Gaps = 38/339 (11%) Query: 27 ATSSVDCVDIPFLEGFEVSE--FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE ++ +EQ L YR M IRR E K+ QLY ++ GFCHL Sbjct: 44 ATFDIKKCDVHRLEEGPPTQAVLTREQGLQYYRTMQTIRRMELKSDQLYKQKIIRGFCHL 103 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 GQEA VG++ ++ D +ITAYR HG+ GV +I+AELTGR+GG +KGKGGSM Sbjct: 104 YDGQEACCVGLEAAINPTDHLITAYRAHGYSYTRGVSVKEILAELTGRRGGCAKGKGGSM 163 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQ GQ++E++N+A Sbjct: 164 HMYA-KN-FYGGNGIVGAQ-------------------------------GQIFETYNMA 190 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG IPG++VDGMD+ V+ A Sbjct: 191 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDY--IPGLRVDGMDVLCVREATQFA 248 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 +CR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R+L+N Sbjct: 249 ADHCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPITLLKDRMLNNNL 308 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +S +LKEI++ VRK I + +FA +D EP E+ + I Sbjct: 309 SSVEELKEIDVEVRKEIEEAAQFATTDPEPPLEEIANHI 347 >gi|296810350|ref|XP_002845513.1| pyruvate dehydrogenase E1 component subunit alpha [Arthroderma otae CBS 113480] gi|238842901|gb|EEQ32563.1| pyruvate dehydrogenase E1 component subunit alpha [Arthroderma otae CBS 113480] Length = 405 Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 161/368 (43%), Positives = 224/368 (60%), Gaps = 24/368 (6%) Query: 17 LNPSVSAKRAATSSVDCV---DIPFL-----EGFEVSEFN---------KEQELSAYRLM 59 L SV+ A+ + D D PF E FE E + K++ Y M Sbjct: 23 LRRSVTTDAASAHAEDIPAEDDKPFSVKLSDESFETYELDPPPYTLKTTKKELKQMYYDM 82 Query: 60 LLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACG 119 + IRR E A +LY + GFCHL GQEAV G++ ++T D++ITAYR HG + G Sbjct: 83 VSIRRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAITPDDKLITAYRCHGFAMMRG 142 Query: 120 VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 I+ EL GR+ GI+ GKGGSMHMF+ KN F+GG+GIVGAQV +G G+AFA +Y Sbjct: 143 GTVRSIIGELLGRREGIAYGKGGSMHMFA-KN-FFGGNGIVGAQVPVGAGLAFAQQYNGE 200 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 + +GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGT+ +R+SA T++ KRG Sbjct: 201 ANTTICLYGDGASNQGQVFEAFNMAKLWNLPVMFGCENNKYGMGTAANRSSALTDYYKRG 260 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTR 298 IPG++V+GMD+ A+KA + Y GP++ E +TYRY GHSMSDP YRTR Sbjct: 261 QY--IPGIKVNGMDVLAIKAAVQYGREYTVGGHGPLVFEYVTYRYGGHSMSDPGTTYRTR 318 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE- 357 EEI MRS +DPI ++++LL +E +LK I+ + R +++ V A+ PD Sbjct: 319 EEIQRMRSTNDPIAGLKQKLLDWNITTEEELKAIDKDARSMVDEEVAIAEKMAAPDATSR 378 Query: 358 -LYSDILI 364 L+ DI + Sbjct: 379 ILFEDIYV 386 >gi|67537984|ref|XP_662766.1| hypothetical protein AN5162.2 [Aspergillus nidulans FGSC A4] gi|40743153|gb|EAA62343.1| hypothetical protein AN5162.2 [Aspergillus nidulans FGSC A4] gi|259484616|tpe|CBF80992.1| TPA: pyruvate dehydrogenase E1 component, alpha subunit (Eurofung) [Aspergillus nidulans FGSC A4] Length = 405 Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 153/324 (47%), Positives = 210/324 (64%), Gaps = 11/324 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K++ Y M+ +RR E A +LY + GFCHL GQEAV VG++ +LT D++ Sbjct: 69 EVTKKELKQMYYDMVAMRRMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHALTREDKI 128 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG+ + G I+ EL GR+ GI+ GKGGSMHMF+ FYGG+GIVGAQV Sbjct: 129 ITAYRCHGYAMMRGGTIRSIIGELLGRREGIAYGKGGSMHMFAPN--FYGGNGIVGAQVP 186 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+AFA +Y VV +GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGTS Sbjct: 187 VGAGLAFAQQYNEEKSTSVVLYGDGASNQGQVFEAFNMAKLWNLPVLFGCENNKYGMGTS 246 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +R+SA T++ KRG IPG++V+GMD+ A KA + Y + GP++ E +TYRY Sbjct: 247 AARSSALTDYYKRGQY--IPGIKVNGMDVLATKAAVKYGKDYAISGNGPLVYEYVTYRYG 304 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YR+REEI MRS DPI+ +++++L SE DLK ++ + R ++ V Sbjct: 305 GHSMSDPGTTYRSREEIQRMRSTQDPIQGLKQKILDWGVMSEEDLKGLDKSARAHVDEEV 364 Query: 345 EFAQSDKEPDPAE----LYSDILI 364 A+ K P P L+ DI + Sbjct: 365 AIAE--KMPLPENNSRILFEDIYV 386 >gi|255718725|ref|XP_002555643.1| KLTH0G14058p [Lachancea thermotolerans] gi|238937027|emb|CAR25206.1| KLTH0G14058p [Lachancea thermotolerans] Length = 413 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 145/315 (46%), Positives = 205/315 (65%), Gaps = 7/315 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L Y+ M++ RR E LY + GFCHL +GQEA+ VG++ ++T+ D +IT+YR H Sbjct: 75 LQMYKDMVITRRMEMACDALYKAKKIRGFCHLTVGQEAIAVGIENAITKKDTVITSYRCH 134 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++AEL GR+ G+S GKGGSMH+++ GFYGG+GIVGAQV LG G+AF Sbjct: 135 SFTYMRGASVQAVLAELMGRRSGVSYGKGGSMHLYAP--GFYGGNGIVGAQVPLGAGLAF 192 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A++Y+ D +GDGA+NQGQV+ESFN+A L+NL ++ ENN+Y MGT+ SR+SA Sbjct: 193 AHQYKNEDACTFDLYGDGASNQGQVFESFNMAKLYNLPCVFACENNKYGMGTAASRSSAM 252 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T + KRG IPG++V+GMDI AV A +C + KGP+++E TYRY GHSMSDP Sbjct: 253 TEYFKRGQ--YIPGLKVNGMDILAVYQASKFAKDWCVSGKGPLVLEYETYRYGGHSMSDP 310 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 YRTR+EI MRS +DPI ++ L+ A+E ++K + RK ++ VE A + Sbjct: 311 GTTYRTRDEIQHMRSKNDPIAGLKMYLMELNIATEEEIKAYDKAARKYVDEQVELADASP 370 Query: 352 EPDP--AELYSDILI 364 P+ + L+ D+ I Sbjct: 371 APEAKMSILFEDVYI 385 >gi|194769049|ref|XP_001966620.1| GF22275 [Drosophila ananassae] gi|190617384|gb|EDV32908.1| GF22275 [Drosophila ananassae] Length = 520 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 152/318 (47%), Positives = 204/318 (64%), Gaps = 6/318 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E ++E ++ Y M+ +RRFE A Y + GFCHL GQEAV GM L + D + Sbjct: 69 ELSREDAITMYTQMVEMRRFEGIADAEYKKRTIRGFCHLYNGQEAVATGMMQRLRKCDSV 128 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR H GV +MAEL G + G S+GKGGSMHM+ K FYGG+GIVGAQV Sbjct: 129 ITAYRCHAWTYLMGVPLLDMMAELVGLKAGCSRGKGGSMHMYCDK--FYGGNGIVGAQVP 186 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+A A++YRR +CV +GDGAANQGQ++E++N+A LW L I+V ENN Y MGT Sbjct: 187 LGAGVALAHQYRRDGGVCVALYGDGAANQGQIFEAYNMAKLWCLPCIFVCENNHYGMGTR 246 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V RASA T F KRG +PG+ VDG + AV++ AV Y H GPI++EM TYRY Sbjct: 247 VDRASAMTEFYKRGQY--MPGLWVDGNQVLAVRSATQFAVDYALEH-GPIVMEMSTYRYV 303 Query: 286 GHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP +YR+R+E+ ++R DPI R ++L +E +LK++++ +RK ++ Sbjct: 304 GHSMSDPGISYRSRDEVVKVRETRDPITSFRNQMLQLCLITEEELKKLDVEIRKHVDAEC 363 Query: 345 EFAQSDKEPDPAELYSDI 362 + A KE ELY+D+ Sbjct: 364 KKALIGKEVPLEELYADV 381 >gi|50311201|ref|XP_455624.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|52788216|sp|O13366|ODPA_KLULA RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|49644760|emb|CAG98332.1| KLLA0F12001p [Kluyveromyces lactis] Length = 412 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 151/342 (44%), Positives = 216/342 (63%), Gaps = 15/342 (4%) Query: 34 VDIP--FLEGF--EVSEFN----KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLC 85 +D+P EG+ +V E + K L Y+ M+++RR E LY + GFCH Sbjct: 47 IDLPETSFEGYLLDVPELSYQTTKSNLLQMYKDMIIVRRMEMACDALYKAKKIRGFCHSS 106 Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 +GQEA+ VG++ ++T+ D +IT+YR HG G ++AEL GR+ G+S GKGGSMH Sbjct: 107 VGQEAIAVGIENAITKRDTVITSYRCHGFTYMRGAAVQAVLAELMGRRTGVSFGKGGSMH 166 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 +++ GFYGG+GIVGAQV LG G+AFA++Y+ D +GDGA+NQGQV+ESFN+A Sbjct: 167 LYAP--GFYGGNGIVGAQVPLGAGLAFAHQYKHEDACSFALYGDGASNQGQVFESFNMAK 224 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 LWNL ++ ENN+Y MGT+ +R+SA T + KRG IPG++V+GMDI AV A Sbjct: 225 LWNLPAVFCCENNKYGMGTAAARSSAMTEYFKRGQ--YIPGLKVNGMDILAVYQASKFAK 282 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 + + GPI++E TYRY GHSMSDP YRTR+EI MRS +DPI ++ LL A Sbjct: 283 DWTVSGNGPIVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLLELGIA 342 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AELYSDILI 364 +E ++K + RK ++ VE A + P+ + L+ D+ + Sbjct: 343 TEDEIKAYDKAARKYVDEQVELADAAPAPEAKMSILFEDVYV 384 >gi|126273604|ref|XP_001387270.1| alpha subunit of pyruvate dehydrogenase [Scheffersomyces stipitis CBS 6054] gi|126213140|gb|EAZ63247.1| alpha subunit of pyruvate dehydrogenase [Pichia stipitis CBS 6054] Length = 396 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 150/335 (44%), Positives = 208/335 (62%), Gaps = 15/335 (4%) Query: 21 VSAKRAATSSVDCVDIPF----LEGFEVS------EFNKEQELSAYRLMLLIRRFEEKAG 70 V A+RA SS D V I EG+ + E KE L Y+ M++IRR E + Sbjct: 15 VIARRAMASSSDLVSIELPESSFEGYNLEIPELTFETEKETLLKMYKDMIIIRRMEMASD 74 Query: 71 QLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELT 130 LY + GFCHL +GQEA+ VG++ ++T D +IT+YR HG G +++ EL Sbjct: 75 ALYKAKKIRGFCHLSVGQEAIAVGIENAITPEDTVITSYRCHGFAFMRGASVKEVLGELM 134 Query: 131 GRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDG 190 G++ G+S GKGGSMHMF+ GFYGG+GIVGAQV LG G+AF++KYR +GDG Sbjct: 135 GKRSGVSYGKGGSMHMFAP--GFYGGNGIVGAQVPLGAGLAFSHKYRGQKAAAFTLYGDG 192 Query: 191 AANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD 250 A+NQGQV+E++N+A LWNL I+ ENN+Y MGT+ +R+SA T + KRG IPG++++ Sbjct: 193 ASNQGQVFEAYNMAKLWNLPCIFACENNKYGMGTAAARSSAITEYYKRGQY--IPGLKIN 250 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHD 309 GMD+ A A + GP+++E TYRY GHSMSDP YRTREE+ MRS +D Sbjct: 251 GMDVLATYQASKFAKDWAAQGNGPLVLEYETYRYGGHSMSDPGTTYRTREEVQHMRSRND 310 Query: 310 PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 PI ++ LL A+E ++K + RK ++ V Sbjct: 311 PIAGLKATLLDKGIATEEEIKSYDKAARKYVDEQV 345 >gi|47600749|emb|CAF05587.1| pyruvate dehydrogenase E1 alpha subunit [Euglena gracilis] Length = 379 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 148/303 (48%), Positives = 198/303 (65%), Gaps = 7/303 (2%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ IRR E KA Q+Y + GFCHL IGQEAV VGM+ SLT D +ITAYR+H L Sbjct: 56 MVRIRRMETKASQMYTQKKIRGFCHLYIGQEAVCVGMESSLTFKDAIITAYRDHAWHLTR 115 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY-- 176 G ++++AE+ G+ G SKGKGGSMHM+ N FYGG+GIVGAQ +G GIAF Y Sbjct: 116 GGTITEVIAEMQGKAAGCSKGKGGSMHMYKAANNFYGGNGIVGAQCPVGAGIAFGLAYED 175 Query: 177 -RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + +C+ +GDGAANQGQ++E+ N+A+LW L VI+V ENNQ+AMGTSV R SAQ F Sbjct: 176 PKAPKGVCLSLYGDGAANQGQLFEAMNMASLWKLPVIFVCENNQFAMGTSVKRGSAQQVF 235 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-AN 294 KR S IPG+ VDGMD+ A + M A +C A GP+ +EM TYRY GHSMSDP + Sbjct: 236 YKR--SDYIPGLWVDGMDVLACREGMRYAKEWCMAGNGPVCMEMQTYRYMGHSMSDPGTS 293 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRTR+E+ +++ D I ++ RL+ ++E +LK +E K ++ + ++ P Sbjct: 294 YRTRDEVQKVKEERDCISKLSSRLIAEGISTEAELKTVEKETNKEVDKEIAAVEA-LPPT 352 Query: 355 PAE 357 P E Sbjct: 353 PFE 355 >gi|332706268|ref|ZP_08426336.1| pyruvate dehydrogenase E1 component, alpha subunit [Lyngbya majuscula 3L] gi|332354973|gb|EGJ34445.1| pyruvate dehydrogenase E1 component, alpha subunit [Lyngbya majuscula 3L] Length = 342 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 146/332 (43%), Positives = 212/332 (63%), Gaps = 11/332 (3%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 +P +E + S + L Y M+L R FE+K ++Y G + GF HL GQEAV G+ Sbjct: 7 LPKVEDY--SPITSAEGLLLYEDMMLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGV 64 Query: 96 KMSLTEGDQMITA-YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 +L G+ +++ YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS ++ Sbjct: 65 IKALRIGEDFVSSTYRDHVHALSAGVPAREVMAELFGKATGCSKGRGGSMHMFSQEHNLL 124 Query: 155 GGHGIVGAQVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALW 207 GG+ V + + TG AF +KYRR SD++ V FGDGA N GQ +E N+AALW Sbjct: 125 GGYAFVAEGIPVATGSAFQSKYRREALGDESSDQVTVCFFGDGACNNGQFFECLNMAALW 184 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 L VIYV+ENN++A+G + RA++Q K+ F + G++VDGMD+ AV+ +A+A Sbjct: 185 KLPVIYVVENNKWAIGMAHERATSQPEIYKKASVFGMAGVEVDGMDVMAVRTVAQEAIAR 244 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 RA +GP +IE LTYR+RGHS++DP R++EE E DPI+ + L N A+ Sbjct: 245 ARAGEGPTLIEALTYRFRGHSLADPDELRSKEE-KEFWLTRDPIKNMASYLTENHLATPE 303 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 +LK IE ++++IN++VEFAQ+ EPDP+EL+ Sbjct: 304 ELKAIESKIQEVINDAVEFAQASPEPDPSELH 335 >gi|2558904|gb|AAD03773.1| pyruvate dehydrogenase complex E1-alpha subunit [Kluyveromyces lactis] Length = 408 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 152/342 (44%), Positives = 216/342 (63%), Gaps = 19/342 (5%) Query: 34 VDIP--FLEGF--EVSEFN----KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLC 85 +D+P EG+ +V E + K L Y+ M+++RR E LY + GFCH Sbjct: 47 IDLPETSFEGYLLDVPELSYQTTKSNLLQMYKDMIIVRRMEMACDALYKAKKIRGFCHSS 106 Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 +GQEA+ VG++ ++T+ D +IT+YR HG G ++AEL GR+ G+S GKGGSMH Sbjct: 107 VGQEAIAVGIENAITKRDTVITSYRCHGFTYMRGAAVQAVLAELMGRRTGVSFGKGGSMH 166 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 +++ GFYGG+GIVGAQV LG G+AFA++Y+ D +GDGA+NQGQV+ESFN+A Sbjct: 167 LYAP--GFYGGNGIVGAQVPLGAGLAFAHQYKHEDACSFALYGDGASNQGQVFESFNMAK 224 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 LWNL ++ ENN+Y MGT+ +R+SA T + KRG IPG++V+GMDI AV D V Sbjct: 225 LWNLPAVFCCENNKYGMGTAAARSSAMTEYFKRGQY--IPGLKVNGMDILAVTKLKDWTV 282 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 + GPI++E TYRY GHSMSDP YRTR+EI MRS +DPI ++ LL A Sbjct: 283 ----SGNGPIVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLLELGIA 338 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AELYSDILI 364 +E ++K + RK ++ VE A + P+ + L+ D+ + Sbjct: 339 TEDEIKAYDKAARKYVDEQVELADAAPAPEAKMSILFEDVYV 380 >gi|218437585|ref|YP_002375914.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Cyanothece sp. PCC 7424] gi|218170313|gb|ACK69046.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cyanothece sp. PCC 7424] Length = 344 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 141/321 (43%), Positives = 211/321 (65%), Gaps = 9/321 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQ 104 + +KE+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ +L + D Sbjct: 16 DISKEEGLILYEDMVLGRMFEDKCAEMYYRGQMFGFVHLYNGQEAVSTGIIKALRPDEDY 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + YR+H H L+CG+ A ++MAEL G++ G SKG+GGSMH+FS K+ GG V + Sbjct: 76 VCSTYRDHVHGLSCGIPAKEVMAELFGKETGCSKGRGGSMHLFSEKHRLLGGFAFVAEGI 135 Query: 165 SLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + TG AF +YRR +D++ V FGDGA+N GQ +E N++ALW L +IYV+EN Sbjct: 136 PVATGAAFQTRYRRDALGDPNADQVTVCFFGDGASNNGQFFECLNMSALWKLPIIYVVEN 195 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G + +RA++Q K+ F++PG++VDGMD+ AV+ +A+A RA +GP +I Sbjct: 196 NKWAIGMAHNRATSQPEVYKKASVFDLPGVEVDGMDVLAVRNVAKEAIARARAGEGPTLI 255 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP R+ +E + S DPI + LL + A++ +L EIE V+ Sbjct: 256 EALTYRFRGHSLADPDELRSSDE-KQFWSARDPISRFGSFLLEHDLATQEELTEIEKKVQ 314 Query: 338 KIINNSVEFAQSDKEPDPAEL 358 K+I ++V+FAQ EPDP+EL Sbjct: 315 KVIEDAVKFAQESPEPDPSEL 335 >gi|307151582|ref|YP_003886966.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Cyanothece sp. PCC 7822] gi|306981810|gb|ADN13691.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cyanothece sp. PCC 7822] Length = 344 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 142/314 (45%), Positives = 204/314 (64%), Gaps = 9/314 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMITAYRE 111 L Y M+L R FE+K ++Y G + GF HL GQEAV G+ +L + D + + YR+ Sbjct: 23 LMLYEDMVLGRMFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGIIKALRPDEDYVCSTYRD 82 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 H H L+CG+ A ++MAEL G++ G SKG+GGSMH+FS K+ GG V + + TG A Sbjct: 83 HVHALSCGIPAREVMAELFGKETGCSKGRGGSMHLFSEKHRLLGGFAFVSEGIPVATGAA 142 Query: 172 FANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 F KYRR +D++ FGDGA+N GQ +E N+AALW L +IYV+ENN++A+G Sbjct: 143 FQTKYRRDALGDETADQVTTCFFGDGASNNGQFFECLNMAALWKLPIIYVVENNKWAIGM 202 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + +RA++Q K+ FN+PG++VDGMD+ AV+ +A+A RA +GP +IE LTYR+ Sbjct: 203 AHNRATSQPEVYKKASVFNMPGIEVDGMDVLAVRTVAKEAIARARAGEGPTLIEALTYRF 262 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHS++DP R+ +E + S DPI ++ LL + AS+ DL +IE V+ II +V Sbjct: 263 RGHSLADPDELRSSDE-KQFWSARDPISRLGSYLLEHDLASQEDLTQIEKKVQGIIEEAV 321 Query: 345 EFAQSDKEPDPAEL 358 FA+ KEPDP+EL Sbjct: 322 TFAEQSKEPDPSEL 335 >gi|322779030|gb|EFZ09429.1| hypothetical protein SINV_04208 [Solenopsis invicta] Length = 332 Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 149/323 (46%), Positives = 210/323 (65%), Gaps = 23/323 (7%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ--------EAVIVGMKMSLTEGDQMITAYR 110 M IRR E +A +LY ++ GF HL +GQ EAV VG+KM+L E D +ITAYR Sbjct: 1 MTYIRRMENRAAELYRQRLINGFLHLYVGQLCGLSCRQEAVAVGLKMALAERDTVITAYR 60 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 HG +A G+ ++AEL GR+ G +KGKGGSMHM++ + FYGG GIVG QV +GTGI Sbjct: 61 CHGFAVAFGIPVRSVLAELMGRKTGAAKGKGGSMHMYAPR--FYGGDGIVGGQVPIGTGI 118 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A+KY + + +GDGAA+QGQ+YE++N+A LWNL V+YV ENN+Y MGT+V R S Sbjct: 119 ALAHKYNGTGAVSFTLYGDGAASQGQIYEAWNMAKLWNLPVVYVCENNRYGMGTAVHRHS 178 Query: 231 AQTNFSKR-----GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTY 282 A T R G+ N P +VDGM I V+ +A+ + R + GPI++EM TY Sbjct: 179 ANTRLYTRGDLVPGIKVNYPVAEVDGMKIVDVR----EAIRFSRDYALRNGPIVLEMATY 234 Query: 283 RYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP +YRTREEI M++ HDPI K ++ +E D+++I ++ K ++ Sbjct: 235 RYFGHSMSDPGYSYRTREEIKAMQTEHDPIMLFTKLIVEKGLMTEKDVEDIRTSIYKQVD 294 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 VE A++D+ P+ +E+ +D+ + Sbjct: 295 EEVEQAKADQWPEMSEISTDVYV 317 >gi|312381015|gb|EFR26866.1| hypothetical protein AND_06771 [Anopheles darlingi] Length = 369 Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 157/316 (49%), Positives = 210/316 (66%), Gaps = 5/316 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE L Y M +IRR E AG LY + GFCHL GQEA VGM+ ++ D IT Sbjct: 28 TKEDALKYYSQMYMIRRMETAAGNLYKEKTIRGFCHLYSGQEACAVGMRAAMRPEDSCIT 87 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG GV +++ELTGR GG +KGKGGSMHM++++ FYGG+GIVGAQV LG Sbjct: 88 AYRCHGWTYLMGVSVQGVLSELTGRGGGCAKGKGGSMHMYASQ--FYGGNGIVGAQVPLG 145 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIA A++Y + C+ +GDGAANQGQ++E++N+A LW L I+V ENN YAMGTS + Sbjct: 146 AGIALASQYNGTKGACISLYGDGAANQGQIFEAYNMAYLWKLPCIFVCENNGYAMGTSAN 205 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R S+ NF R F +PG VDGMD+ AV+ A+ +C + KGPI++E TYRY GH Sbjct: 206 RGSSNVNFYTRA-DF-VPGCWVDGMDVLAVREATRFALEHCSSGKGPILLETATYRYSGH 263 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YR+R+EI E+R DPI +R+++L + AS +LKEIE +R ++ + + Sbjct: 264 SMSDPGTSYRSRDEIAEVRQTRDPITSLREKILSAELASVEELKEIEGKIRAEVDTATKV 323 Query: 347 AQSDKEPDPAELYSDI 362 A++DKE EL +DI Sbjct: 324 AKTDKEISVDELTADI 339 >gi|269837961|ref|YP_003320189.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sphaerobacter thermophilus DSM 20745] gi|269787224|gb|ACZ39367.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sphaerobacter thermophilus DSM 20745] Length = 336 Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 133/312 (42%), Positives = 195/312 (62%), Gaps = 1/312 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 K+ L YR M+ IR+FEE+A + Y G +GGF HL IG+EA+ VG ++ E D ++ Sbjct: 14 LGKDDLLHLYRQMVAIRKFEERAAEQYAHGKIGGFLHLYIGEEAIAVGAIDAMEERDHVV 73 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HG+ +A G D +MAEL GR G++ G+GGSMH + F+GG+ IV + + Sbjct: 74 THYRDHGYAIALGTDPRLLMAELFGRSTGVAGGRGGSMHFADAERNFWGGYAIVAGHLPI 133 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A A++Y D + + FGDGA N G +E+ N A+LW L V+++ ENNQY MGT+V Sbjct: 134 AAGLALASQYLEQDYVVLCFFGDGATNNGAFHEALNFASLWKLPVLFICENNQYGMGTAV 193 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ASA +K+ +++IP ++DG D+ V+ + KA+ +CRA GP IE +TYR+RG Sbjct: 194 EYASAVREMAKKATAYDIPSERIDGQDVLEVREAVKKALDHCRAGNGPYFIEAMTYRFRG 253 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSM+DP YRT+EE+ + R DPI + R +LL A+E +L I+ V + +V F Sbjct: 254 HSMADPEAYRTKEEVEKWRQE-DPILRFRGKLLAEGVATEDELNAIDSEVDAQMEEAVRF 312 Query: 347 AQSDKEPDPAEL 358 A PDP+ L Sbjct: 313 ADESPVPDPSTL 324 >gi|297184165|gb|ADI20284.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11] Length = 331 Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 142/315 (45%), Positives = 193/315 (61%), Gaps = 1/315 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 K L Y ML R+FE+ A LY + GF HL GQEA++ G ++ +GD MIT Sbjct: 7 TKATYLKWYEDMLFWRKFEDMAAALYIQQKIRGFLHLYNGQEAILAGSAYAMEDGDNMIT 66 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR H +A G D +IMAEL G+ G S+GKGGSMHMFS GF+GGHGIVG Q+ LG Sbjct: 67 AYRNHVQPMALGEDPRRIMAELMGKVTGTSRGKGGSMHMFSPDKGFWGGHGIVGGQIPLG 126 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+AFA++Y + + GDGA QG +E+ N+A LW L V++ +ENN YAMGTSV Sbjct: 127 AGLAFADQYFGRKNVTLTYMGDGAIRQGAWHETANLAMLWKLPVVFCVENNGYAMGTSVE 186 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R + QT K G +++P VDGMD AV + +A R GP ++E+ TYRY+GH Sbjct: 187 RTAGQTPIHKLGEGYDMPNRAVDGMDPIAVYDAVYEASERARRGDGPTLLEIRTYRYKGH 246 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDP YRT+EE+ E ++ DPI ++ WA+E +++ I V+ ++ V+FA Sbjct: 247 SMSDPQKYRTKEEVAEYQAK-DPITLCLNKIKEKNWATEEEIESIIQRVKDVVAECVKFA 305 Query: 348 QSDKEPDPAELYSDI 362 + PD +ELY I Sbjct: 306 EESDFPDASELYQGI 320 >gi|295658595|ref|XP_002789858.1| pyruvate dehydrogenase E1 component subunit alpha [Paracoccidioides brasiliensis Pb01] gi|226283002|gb|EEH38568.1| pyruvate dehydrogenase E1 component subunit alpha [Paracoccidioides brasiliensis Pb01] Length = 405 Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 162/360 (45%), Positives = 222/360 (61%), Gaps = 25/360 (6%) Query: 26 AATSSVDCV----DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEE 67 AA+S + V + PF E FE E + K++ Y M+ IRR E Sbjct: 31 AASSHAEAVPADENTPFTVKLSDESFETYELDPPPYTLETTKKELKQMYHDMVSIRRMEM 90 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 A +LY + GFCHL GQEAV VG++ ++T+ D++ITAYR HG G I+ Sbjct: 91 AADRLYKEKKIRGFCHLSTGQEAVAVGIEHAITKEDKLITAYRCHGFAYMRGGTIKSIIG 150 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 EL GR+ GI+ GKGGSMHMF+ KN F+GG+GIVGAQV +G G+AFA +Y V + Sbjct: 151 ELLGRREGIAYGKGGSMHMFA-KN-FFGGNGIVGAQVPVGAGLAFAQQYNGEKTTTVTLY 208 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGA+NQGQV+E+FN+A L NL I+ ENN+Y MGTS +R+SA T++ KRG IPG+ Sbjct: 209 GDGASNQGQVFEAFNMAKLLNLPCIFGCENNKYGMGTSANRSSALTDYYKRGQY--IPGL 266 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRS 306 +++GMD+ A+KA + Y A +GP++ E +TYRY GHSMSDP YRTREEI MRS Sbjct: 267 KINGMDVLAIKAAVQYGREYTIAGRGPLVFEYVTYRYGGHSMSDPGTTYRTREEIQRMRS 326 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--PAELYSDILI 364 +DPI ++++LL SE +LK I+ + R ++ V A+ PD P L+ D + Sbjct: 327 TNDPIAGLKQKLLDWGVTSEEELKGIDKDARNFVDAQVAEAEKMPFPDATPRILFEDTYV 386 >gi|225682979|gb|EEH21263.1| pyruvate dehydrogenase E1 component subunit alpha [Paracoccidioides brasiliensis Pb03] Length = 405 Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 160/349 (45%), Positives = 220/349 (63%), Gaps = 25/349 (7%) Query: 26 AATSSVDCV----DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEE 67 AA+S + V + PF E FE E + K++ Y M+ IRR E Sbjct: 31 AASSHAEAVPADENTPFTVKLSDESFETYELDPPPYTLETTKKELKQMYHDMVSIRRMEM 90 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 A +LY + GFCHL GQEAV VG++ ++T+ D++ITAYR HG G I+ Sbjct: 91 AADRLYKEKKIRGFCHLSTGQEAVAVGIEHAITKEDKLITAYRCHGFAFMRGGTIKSIIG 150 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 EL GR+ GI+ GKGGSMHMF+ KN F+GG+GIVGAQV +G G+AFA +Y V + Sbjct: 151 ELLGRREGIAYGKGGSMHMFA-KN-FFGGNGIVGAQVPVGAGLAFAQQYNGEKTTTVTLY 208 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGA+NQGQV+E+FN+A L NL I+ ENN+Y MGTS +R+SA T++ KRG IPG+ Sbjct: 209 GDGASNQGQVFEAFNMAKLLNLPCIFGCENNKYGMGTSANRSSALTDYYKRGQY--IPGL 266 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRS 306 +++GMD+ A+KA + Y A +GP++ E +TYRY GHSMSDP YRTREEI MRS Sbjct: 267 KINGMDVLAIKAAVQYGREYTIAGRGPLVFEYVTYRYGGHSMSDPGTTYRTREEIQRMRS 326 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 +DPI ++++LL SE +LK I+ + R ++ V A+++K P P Sbjct: 327 TNDPIAGLKQKLLDWGVTSEEELKGIDKDARNFVDGQV--AEAEKMPFP 373 >gi|255931699|ref|XP_002557406.1| Pc12g05620 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582025|emb|CAP80189.1| Pc12g05620 [Penicillium chrysogenum Wisconsin 54-1255] Length = 402 Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 153/322 (47%), Positives = 205/322 (63%), Gaps = 8/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K Q YR M IRR E A QLY + GFCHL GQEAV VG++ ++++ D++ Sbjct: 68 ETTKNQLKQLYRDMTTIRRMELAADQLYKERKIRGFCHLSTGQEAVAVGIEHAISKEDKL 127 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG G I+ EL GR+ GI+ GKGGSMHM+S F+GG+GIVGA V Sbjct: 128 ITAYRSHGFTYMRGGTIRSIIGELLGRRDGIAHGKGGSMHMYS--KSFFGGNGIVGANVP 185 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA +Y + + + +GDGAANQGQV+ESFN+A LWNL V++ ENN+Y MGTS Sbjct: 186 LGAGIAFAQQYDETGNVTINLYGDGAANQGQVHESFNMAKLWNLPVMFGCENNKYGMGTS 245 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RASA T + KRG IPG++VDGMD+ AV A + + + GP++ E +TYR+ Sbjct: 246 AERASAMTEYYKRG--HYIPGLRVDGMDVLAVMAAVKHGRDFVKRGNGPLVYEYVTYRFA 303 Query: 286 GHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YRTREE+ + R+N DP+ ++ RL+ +E + K +E V+ I + V Sbjct: 304 GHSMSDPGIAYRTREEMRKNRAN-DPLTYLKTRLVDWGIMTEDEAKAMEKEVKTTIKDEV 362 Query: 345 EFAQSDKEPDPAE--LYSDILI 364 E AQ P+ + L+ DI + Sbjct: 363 EHAQQMPAPEASLDILFEDIYV 384 >gi|319952314|ref|YP_004163581.1| pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit [Cellulophaga algicola DSM 14237] gi|319420974|gb|ADV48083.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cellulophaga algicola DSM 14237] Length = 332 Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 145/318 (45%), Positives = 201/318 (63%), Gaps = 4/318 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM--KMSLTE 101 + + KE L Y ML R+FE+K +Y V GF HL GQEAV+ G M LT+ Sbjct: 1 MEKITKEVYLKWYEDMLFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVLAGALHAMDLTK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MITAYR H + GVD ++MAEL G+ G S+G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 -DKMITAYRNHVQPIGMGVDPRRVMAELFGKVTGTSQGMGGSMHIFSKEHRFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG G+AFA+KY++SD + + GDGA QG ++E+FN+A LW L V++V ENN YA Sbjct: 120 GQIPLGAGLAFADKYKKSDAVTLCYMGDGAVRQGSLHETFNLAMLWQLPVVFVCENNGYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV+R S T+ K G+ + +P VDGMD V M KA+ R+ GP +EM T Sbjct: 180 MGTSVARTSYSTDIWKLGLGYEMPCGPVDGMDPVTVAKEMSKAIERARSGGGPTFLEMKT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD YRT++E+ E + DPI QV + K+A++ ++ I ++K++ Sbjct: 240 YRYRGHSMSDAQQYRTKDEVEEYKKI-DPITQVLDVIKDKKYATDDEISAIGKKIKKLVA 298 Query: 342 NSVEFAQSDKEPDPAELY 359 +FA+ P +++Y Sbjct: 299 ECEKFAEESDFPPVSQMY 316 >gi|226290429|gb|EEH45913.1| pyruvate dehydrogenase E1 component subunit alpha [Paracoccidioides brasiliensis Pb18] Length = 405 Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 160/349 (45%), Positives = 220/349 (63%), Gaps = 25/349 (7%) Query: 26 AATSSVDCV----DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEE 67 AA+S + V + PF E FE E + K++ Y M+ IRR E Sbjct: 31 AASSHAEAVPADENTPFTVKLSDESFETYELDPPPYTLQTTKKELKQMYHDMVSIRRMEM 90 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 A +LY + GFCHL GQEAV VG++ ++T+ D++ITAYR HG G I+ Sbjct: 91 AADRLYKEKKIRGFCHLSTGQEAVAVGIEHAITKEDKLITAYRCHGFAYMRGGTIKSIIG 150 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 EL GR+ GI+ GKGGSMHMF+ KN F+GG+GIVGAQV +G G+AFA +Y V + Sbjct: 151 ELLGRREGIAYGKGGSMHMFA-KN-FFGGNGIVGAQVPVGAGLAFAQQYNGEKTTTVTLY 208 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGA+NQGQV+E+FN+A L NL I+ ENN+Y MGTS +R+SA T++ KRG IPG+ Sbjct: 209 GDGASNQGQVFEAFNMAKLLNLPCIFGCENNKYGMGTSANRSSALTDYYKRGQY--IPGL 266 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRS 306 +++GMD+ A+KA + Y A +GP++ E +TYRY GHSMSDP YRTREEI MRS Sbjct: 267 KINGMDVLAIKAAVQYGREYTIAGRGPLVFEYVTYRYGGHSMSDPGTTYRTREEIQRMRS 326 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 +DPI ++++LL SE +LK I+ + R ++ V A+++K P P Sbjct: 327 TNDPIAGLKQKLLDWGVTSEEELKGIDKDARNFVDGQV--AEAEKMPFP 373 >gi|284053724|ref|ZP_06383934.1| pyruvate dehydrogenase (lipoamide) [Arthrospira platensis str. Paraca] gi|291570198|dbj|BAI92470.1| pyruvate dehydrogenase E1 alpha subunit [Arthrospira platensis NIES-39] Length = 343 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 142/320 (44%), Positives = 200/320 (62%), Gaps = 9/320 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI- 106 +E+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ S+ + + Sbjct: 18 TREEGLMLYEDMVLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIRSMRRDEDFVC 77 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS+K+ GG V + + Sbjct: 78 STYRDHVHALSAGVTAREVMAELFGKATGCSKGRGGSMHMFSSKHNLLGGFAFVAEGIPV 137 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG AF +KYRR SD + FGDGA N GQ YE N+A LW L +++V+ENN+ Sbjct: 138 ATGAAFQSKYRREVMGDESSDTVTACFFGDGACNNGQFYECLNMATLWKLPILFVVENNK 197 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA++ K+G +F +PG +VDGMD+ AV+ KA+A RA +GP +IE Sbjct: 198 WAIGMAHERATSDPEIYKKGPAFGMPGYEVDGMDVLAVREVAQKAIARARAGEGPTLIEA 257 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R R+E E DPI + L + A +LK I+ V+ + Sbjct: 258 LTYRFRGHSLADPDELRDRDE-KEFWFARDPINKFFAYLTEHNLADSDELKAIDKKVQDV 316 Query: 340 INNSVEFAQSDKEPDPAELY 359 IN++VEFAQ+ EPDP+ELY Sbjct: 317 INDAVEFAQTSPEPDPSELY 336 >gi|302690162|ref|XP_003034760.1| hypothetical protein SCHCODRAFT_84343 [Schizophyllum commune H4-8] gi|300108456|gb|EFI99857.1| hypothetical protein SCHCODRAFT_84343 [Schizophyllum commune H4-8] Length = 409 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 146/323 (45%), Positives = 207/323 (64%), Gaps = 14/323 (4%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K++ L+ Y M +RR E A LY ++ GFCHL IGQEAV VG++ + + D + Sbjct: 74 DVTKDELLTMYSQMQTMRRMEMAADALYKAKLIRGFCHLAIGQEAVSVGLEHGIHKDDLV 133 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT YR H + G ++ EL GRQ G+S GKGGSMH+F+ F+GG+GIVGAQV Sbjct: 134 ITGYRCHPFAVLRGGTIVGVLGELLGRQCGMSHGKGGSMHIFTPT--FFGGNGIVGAQVP 191 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+AFA KYR+ D +GDGA+NQGQV+E+FN+A LWNL ++V ENN+Y MGTS Sbjct: 192 VGAGLAFALKYRQKDNCSFALYGDGASNQGQVFEAFNMAKLWNLPCVFVCENNKYGMGTS 251 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA-----HKGPIIIEML 280 R+S T + KRG IPG+QV+GMDI A + +A AY R +GP+++E + Sbjct: 252 AERSSMNTEYFKRGD--KIPGIQVNGMDIIATR----QAAAYARKWTVDDKRGPLLVEFV 305 Query: 281 TYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRY GHSMSDP YR+REE+ MRS DPI +++ + ASE +LK ++ ++ Sbjct: 306 TYRYGGHSMSDPGTTYRSREEVQRMRSTQDPIRGLQRYIEEWGVASEQELKALDKKAKQE 365 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 ++ +VE A++ EP + + D+ Sbjct: 366 VDEAVEIAKASPEPSMEDFWKDV 388 >gi|119492641|ref|ZP_01623820.1| Dehydrogenase, E1 component [Lyngbya sp. PCC 8106] gi|119452979|gb|EAW34150.1| Dehydrogenase, E1 component [Lyngbya sp. PCC 8106] Length = 346 Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 144/331 (43%), Positives = 208/331 (62%), Gaps = 11/331 (3%) Query: 39 LEGFEVSEFN--KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 L FE N E+ L+ Y M+L R FE+K ++Y G + GF HL GQEAV G+ Sbjct: 9 LPTFEADHANITHEEGLTLYEDMVLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVSSGII 68 Query: 97 MSLTEGDQMI-TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 ++ G+ + + YR+H H L+ GV A ++MAEL G++ G SKG+GGSMHMFS ++ G Sbjct: 69 KAMRPGEDFVCSTYRDHVHALSAGVPAREVMAELFGKETGCSKGRGGSMHMFSAQHKLLG 128 Query: 156 GHGIVGAQVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWN 208 G V + + TG AF KYRR +D++ FGDGA N GQ YE N+A LW Sbjct: 129 GFAFVAEGIPVATGAAFQTKYRREALGDENADQVTACFFGDGACNNGQFYECLNMATLWK 188 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L +I+V+ENN++A+G + RA++ K+G +F +PG +VDGMDI AV +AVA Sbjct: 189 LPIIFVVENNKWAIGMAHERATSDPEIYKKGPAFGMPGYEVDGMDILAVHTLAKEAVARA 248 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 RA +GP +IE LTYR+RGHS++DP R +EE + + DPI+++ L+ AS Sbjct: 249 RAGEGPTLIEALTYRFRGHSLADPDELRDQEE-KDFWFSRDPIKKLANYLIEKNLASAEQ 307 Query: 329 LKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 LKEI+ ++ +++++VEFA+S EPDP+ELY Sbjct: 308 LKEIDHKIQAVVDDAVEFAESSSEPDPSELY 338 >gi|302406128|ref|XP_003000900.1| pyruvate dehydrogenase E1 component subunit alpha [Verticillium albo-atrum VaMs.102] gi|261360158|gb|EEY22586.1| pyruvate dehydrogenase E1 component subunit alpha [Verticillium albo-atrum VaMs.102] Length = 417 Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 151/330 (45%), Positives = 213/330 (64%), Gaps = 15/330 (4%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K++ Y+ M+ +R+ E A +LY + GFCHL GQEAV +G++ +LT+ D + Sbjct: 72 EVTKKELKQMYQDMVTVRQLEMAADRLYKEKKIRGFCHLSTGQEAVAIGIEHALTKEDDI 131 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG G I+ EL GR+ GI+ GKGGSMHMF+ KN FYGG+GIVGAQV Sbjct: 132 ITAYRCHGFAYMRGGTVRSIIGELLGRREGIAYGKGGSMHMFA-KN-FYGGNGIVGAQVP 189 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE--------N 217 +G G+AFA+KY V+ +GDGA+NQGQV+E+FN+A LWNL ++ E + Sbjct: 190 VGAGLAFAHKYNGRKNASVILYGDGASNQGQVFEAFNMAKLWNLPALFGCETMTGDNSAD 249 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N+Y MGT+ +R+SA T++ KRG IPG++V+GMD AV+A + Y +A GP+++ Sbjct: 250 NKYGMGTAANRSSALTDYYKRGQY--IPGLKVNGMDALAVRAAVKYGKEYTQAENGPLVL 307 Query: 278 EMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E +TYRY GHSMSDP YRTREEI MRS +DPI +++++L +E +LK I+ Sbjct: 308 EYVTYRYGGHSMSDPGTTYRTREEIQRMRSTNDPIAGLKQKILDWGVVTEDELKAIDKEA 367 Query: 337 RKIINNSVEFAQSDKEPD--PAELYSDILI 364 R +N V A++ P+ P L+ DI + Sbjct: 368 RSHVNEEVAIAEAMAVPEATPKILFEDIYV 397 >gi|163754145|ref|ZP_02161268.1| pyruvate dehydrogenase E1 component alpha subunit [Kordia algicida OT-1] gi|161326359|gb|EDP97685.1| pyruvate dehydrogenase E1 component alpha subunit [Kordia algicida OT-1] Length = 332 Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 203/321 (63%), Gaps = 4/321 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG--MKMSLTE 101 + + KE L Y ML R+FE+K +Y V GF HL GQEAV+ G M L++ Sbjct: 1 MEKITKEIYLKWYEDMLFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVLAGSLHAMDLSK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MITAYR H + GVD K+MAEL G+ G S+G GGSMH+F+ +NGFYGGHGIVG Sbjct: 61 -DKMITAYRNHVQPIGMGVDPKKVMAELYGKATGTSQGLGGSMHIFAPENGFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG G+AFA+KY + + + + GDGA QG ++E+FN+A W L V+++ ENN YA Sbjct: 120 GQIPLGAGLAFADKYFKRNAVTLCYMGDGAVRQGSLHETFNMAMNWKLPVVFICENNGYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV R + T+ K G+ + +P VDGM+ V + +AV R GP +EM T Sbjct: 180 MGTSVERTANHTDIWKLGLGYEMPCGPVDGMNPEKVAEAVHEAVERARRGDGPTFLEMKT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD +YRT++E+ E + DPI QV++ LL K+A+E ++ E++ V+ ++ Sbjct: 240 YRYRGHSMSDAQHYRTKDEVAEYKKI-DPITQVKETLLEKKYATEDEIAEMDKRVKDLVK 298 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 +FA+ PD + +Y + Sbjct: 299 ECEKFAEESPYPDKSLMYDAV 319 >gi|145238760|ref|XP_001392027.1| pyruvate dehydrogenase E1 component subunit alpha [Aspergillus niger CBS 513.88] gi|134076523|emb|CAK39718.1| unnamed protein product [Aspergillus niger] Length = 404 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 162/376 (43%), Positives = 225/376 (59%), Gaps = 30/376 (7%) Query: 14 KMALNP----SVSAKRAATSSVDCV----DIPFL-----EGFEVSEFN---------KEQ 51 + AL P SV+ AA+S + V D PF E FE E + K++ Sbjct: 15 RQALTPLARRSVTTD-AASSHAENVPQEDDKPFTVRLSDESFETYEIDPPPYTLEITKKE 73 Query: 52 ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 Y M+ +RR E A +LY + GFCHL GQEAV G++ ++T D++ITAYR Sbjct: 74 LKQMYYDMVSMRRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAITRDDKVITAYRC 133 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 HG + G I+ EL GR+ GI+ GKGGSMHMF+ FYGG+GIVGAQV +G G+A Sbjct: 134 HGFAMMRGGTVRSIIGELLGRREGIAYGKGGSMHMFAPN--FYGGNGIVGAQVPVGAGLA 191 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 FA +Y +V +GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGTS +R+SA Sbjct: 192 FAQQYNEEPTTSIVLYGDGASNQGQVFEAFNMAKLWNLPVLFGCENNKYGMGTSAARSSA 251 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 T + KRG IPG++V+GMD+ A KA + + A GP++ E +TYRY GHSMSD Sbjct: 252 LTEYYKRGQY--IPGIKVNGMDVLATKAAVKYGKDWAVAGNGPLVYEYVTYRYGGHSMSD 309 Query: 292 P-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 P YR+REEI MRS +DPI +++++L SE +LK ++ R ++ V A+ Sbjct: 310 PGTTYRSREEIQRMRSTNDPIAGLKQKILDWNVCSEDELKSLDKAARAHVDEEVAIAEKM 369 Query: 351 KEPDPAE--LYSDILI 364 P+ L+ DI + Sbjct: 370 PAPENTSRILFEDIYV 385 >gi|295135750|ref|YP_003586426.1| pyruvate dehydrogenase E1 component subunit alpha [Zunongwangia profunda SM-A87] gi|294983765|gb|ADF54230.1| pyruvate dehydrogenase E1 component subunit alpha [Zunongwangia profunda SM-A87] Length = 332 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 139/318 (43%), Positives = 200/318 (62%), Gaps = 2/318 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEG 102 + + K L Y ML R+FE+K Q+Y V GF HL GQEA++ G ++ TE Sbjct: 1 MKKITKATYLKWYEDMLFWRKFEDKLAQVYIQQKVRGFLHLYNGQEAILAGALHAMDTEK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H + GVD ++MAEL G+ G S+G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 DRMITAYRNHVQPIGLGVDPKRVMAELYGKGTGTSQGLGGSMHIFSKEHRFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG G+AFA+KY + D + + GDGA QG ++E+ +A WNL V++ +ENN YAM Sbjct: 121 QIPLGAGLAFADKYFKRDAVTLTFMGDGATRQGSLHETLTMAVNWNLPVVFCVENNGYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV+R + T+ K G + +P VD MD V +D+A+ R +GP +E+ TY Sbjct: 181 GTSVARTAKSTDIWKLGNGYEMPCAPVDAMDPEKVAEALDEAITRARKGEGPTFLELKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YRT++E+ E + DPI +VR ++ NK+A+E D+K+I+ V+ + Sbjct: 241 RYRGHSMSDAQHYRTKDEVAEYQKI-DPITKVRSIIIDNKYATEDDIKKIDKRVKDKVKE 299 Query: 343 SVEFAQSDKEPDPAELYS 360 +FA+ P+ +Y Sbjct: 300 CEQFAEESAFPEKNVMYD 317 >gi|300778384|ref|ZP_07088242.1| pyruvate dehydrogenase complex E1 component alpha subunit [Chryseobacterium gleum ATCC 35910] gi|300503894|gb|EFK35034.1| pyruvate dehydrogenase complex E1 component alpha subunit [Chryseobacterium gleum ATCC 35910] Length = 333 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 151/319 (47%), Positives = 200/319 (62%), Gaps = 4/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK--MSLTE 101 + EF+KE L Y M + RRFE+K LY + GF HL GQEA+ G M LT+ Sbjct: 1 MKEFSKEVYLKWYEDMTMWRRFEDKCRSLYLKQKIRGFLHLYNGQEAIPAGFTHAMDLTK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D MITAYR H H +A GVD +IMAEL G+ G S G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 -DSMITAYRCHIHPMAMGVDPKRIMAELCGKATGTSGGMGGSMHIFSKEHRFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG GIAFA+KY + + FGDGAA QG ++E+FN+A W L V++V+ENNQYA Sbjct: 120 GQIPLGAGIAFADKYFDRKAVNICFFGDGAARQGSLHETFNMAMNWKLPVVFVVENNQYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV R + + K G+ + +P + VD MD V +A+ R GP IE T Sbjct: 180 MGTSVKRTANHEDIYKLGLGYEMPCLAVDAMDPEKVAEAAYEAIERARRGDGPTFIEART 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD YR++EE+ + N DPIE ++ R+L N WA+E +L+ I+ R + Sbjct: 240 YRYRGHSMSDAEPYRSKEEVA-LHKNDDPIELIKHRILENGWATEAELETIDNKSRDFVE 298 Query: 342 NSVEFAQSDKEPDPAELYS 360 +EF ++ PDP ++Y Sbjct: 299 ECIEFMENSPYPDPEKIYE 317 >gi|212531411|ref|XP_002145862.1| pyruvate dehydrogenase, putative [Penicillium marneffei ATCC 18224] gi|210071226|gb|EEA25315.1| pyruvate dehydrogenase, putative [Penicillium marneffei ATCC 18224] Length = 406 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 153/330 (46%), Positives = 208/330 (63%), Gaps = 20/330 (6%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +K + Y+ M IRR E + QLY + GFCHL GQEAV VG++ ++ + D + Sbjct: 65 ETSKSELRQLYKDMTTIRRLELLSDQLYKERKIRGFCHLSTGQEAVAVGIEHAIIKSDPL 124 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG G I+ EL G+Q GIS GKGGSMHMF+ GFYGG+GIVGA V Sbjct: 125 ITAYRSHGFTYMRGGRLRSIIGELLGKQDGISYGKGGSMHMFA--KGFYGGNGIVGAHVP 182 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +GTGI+ A +Y + V +GDGAANQGQV+ESFN+A LWNL V+Y ENNQY MGTS Sbjct: 183 VGTGISLAQQYSEKMNMTVDMYGDGAANQGQVHESFNMAKLWNLPVLYGCENNQYGMGTS 242 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR--------AHKGPIII 277 R+SA T++ KRG F PG++++GMD+ AV + AV Y R +H+GP++ Sbjct: 243 AERSSAMTDYYKRGHYF--PGIRINGMDVLAVLS----AVKYARRLITGEEGSHEGPLLY 296 Query: 278 EMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E +TYR+ GHSMSDP YR+REE+ + R DP+ ++ R++ K +E +LK +E + Sbjct: 297 EFVTYRFAGHSMSDPGIAYRSREELKDAR-KQDPLIVLKDRMIELKINTEDELKTMEKEI 355 Query: 337 RKIINNSVEFAQSDKEPDPAE--LYSDILI 364 R +N E A +P P + L+ DI + Sbjct: 356 RAHVNAEAEVALKMDDPPPTQNTLFQDIYV 385 >gi|218248868|ref|YP_002374239.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Cyanothece sp. PCC 8801] gi|257061930|ref|YP_003139818.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Cyanothece sp. PCC 8802] gi|218169346|gb|ACK68083.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cyanothece sp. PCC 8801] gi|256592096|gb|ACV02983.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cyanothece sp. PCC 8802] Length = 344 Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 138/324 (42%), Positives = 211/324 (65%), Gaps = 9/324 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ L Y M+L R FE+K ++Y G + GF HL GQEA+ G+ +L G+ ++ Sbjct: 18 TKEEGLLLYEDMMLGRLFEDKCAEMYYRGRMFGFVHLYNGQEAISTGIIKALRSGEDYVS 77 Query: 108 A-YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+CGV A ++MAEL G++ G SKG+GGSMH+FS ++ GG+ V + + Sbjct: 78 STYRDHVHALSCGVPAREVMAELFGKETGCSKGRGGSMHLFSAQHRLLGGYAFVAEGIPV 137 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G AF +KYRR +D++ V FGDGA+N GQ +E N++ALW L +IYV+ENN+ Sbjct: 138 AMGAAFQSKYRREAMGDPNADQVTVCFFGDGASNNGQFFECLNMSALWKLPIIYVVENNK 197 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA++Q K+ F++ G++VDGMD+ AV++ +A+A RA +GP +IE Sbjct: 198 WAIGMAHDRATSQPEIYKKASVFSMAGVEVDGMDVLAVRSVAQEAIARARAGEGPTLIEA 257 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R +E + DPI ++ L+ + A+ +LK+IE V++ Sbjct: 258 LTYRFRGHSLADPDELRAPDE-KQFWGARDPITKLATYLVEHNLANSQELKDIEKRVQET 316 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 IN +V+FA++ EPDP+ELY I Sbjct: 317 INEAVQFAENSPEPDPSELYRYIF 340 >gi|39997538|ref|NP_953489.1| dehydrogenase complex, E1 component subunit alpha [Geobacter sulfurreducens PCA] gi|39984429|gb|AAR35816.1| dehydrogenase complex, E1 component, alpha subunit [Geobacter sulfurreducens PCA] Length = 325 Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 135/312 (43%), Positives = 192/312 (61%), Gaps = 1/312 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L + M+L R FEE + Y G + GF HL GQEAV VG +L + D +++AYREH Sbjct: 15 LKMHEQMVLSREFEESCAEQYTKGHITGFLHLYSGQEAVAVGATAALRKDDYILSAYREH 74 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 + G + ++MAEL G+ G+ KGKGGSMH+F F GG+ IVG Q + G+AF Sbjct: 75 AQAIVRGAEPRRVMAELFGKATGMCKGKGGSMHLFDPSLAFMGGYAIVGGQFPIAVGLAF 134 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+KYR+ +I FGDGA NQG +ES N A LW L V+++ ENN Y +GT+VSRASA Sbjct: 135 ASKYRKEGRISACFFGDGAVNQGTFHESLNWARLWELPVLFICENNFYGIGTAVSRASAL 194 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 ++ KR ++IP ++VDGMD+ AV + + R H P +IE +TYR+RGHSM+DP Sbjct: 195 SDIHKRTCGYDIPSVRVDGMDVMAVHEAVKWGAEWVREHSRPYLIEAMTYRFRGHSMADP 254 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR+ E+ E+ + DPI KRL+ A+E +L + R ++ ++V FA+ Sbjct: 255 GKYRSAAEV-ELWKSRDPIPNFEKRLVEEGIATEAELAAVLEKCRGVVADAVAFAEESPW 313 Query: 353 PDPAELYSDILI 364 P+ E+YSDI + Sbjct: 314 PEDDEVYSDIYV 325 >gi|150025451|ref|YP_001296277.1| pyruvate dehydrogenase E1 component, alpha subunit [Flavobacterium psychrophilum JIP02/86] gi|149771992|emb|CAL43468.1| Pyruvate dehydrogenase E1 component, alpha subunit [Flavobacterium psychrophilum JIP02/86] Length = 332 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 144/318 (45%), Positives = 199/318 (62%), Gaps = 2/318 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG- 102 + E KE L Y MLL R+FE+K LY V GF HL GQEAV+ G ++ G Sbjct: 1 MKEITKEVYLKWYEDMLLWRKFEDKLAALYIQQKVRGFLHLYNGQEAVLAGALHAMELGK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H + GVD +MAEL G+ G SKG GGSMH+FS + GF+GGHGIVGA Sbjct: 61 DKMITAYRNHVQPIGMGVDPKAVMAELLGKVTGTSKGMGGSMHIFSKEKGFFGGHGIVGA 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ +G G+AFA+KY D + + FGDGAA QG ++E+FN+A LW L V++++ENN YAM Sbjct: 121 QIPVGAGMAFADKYFGRDGVTLTYFGDGAARQGSLHEAFNMAMLWKLPVVFIVENNGYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R + T+ K G+ + +P VDGM+ V M +A+ R GP +EM TY Sbjct: 181 GTSVERTANHTDIWKLGLGYEMPCGPVDGMNPVKVAEAMHEAIDRARRGDGPTFLEMKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+RGHSMSD YR+++E+ E + DPI QV + K+A+E +++ I+ V+ ++ Sbjct: 241 RFRGHSMSDAQLYRSKDEVEEYKKI-DPITQVLDVIRDEKYATEEEIEAIDERVKNLVEE 299 Query: 343 SVEFAQSDKEPDPAELYS 360 FA+ P+ +LY Sbjct: 300 CATFAEESAFPEVQQLYD 317 >gi|209527802|ref|ZP_03276294.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Arthrospira maxima CS-328] gi|209491754|gb|EDZ92117.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Arthrospira maxima CS-328] Length = 343 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 143/323 (44%), Positives = 202/323 (62%), Gaps = 9/323 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMI 106 +E+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ S+ + D + Sbjct: 18 TREEGLMLYEDMVLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIRSMRRDQDFVC 77 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS+++ GG V + + Sbjct: 78 STYRDHVHALSAGVTAREVMAELFGKATGCSKGRGGSMHMFSSQHNLLGGFAFVAEGIPV 137 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG AF +KYRR SD + FGDGA N GQ YE N+A LW L +++V+ENN+ Sbjct: 138 ATGAAFQSKYRREVMGDESSDTVTACFFGDGACNNGQFYECLNMATLWKLPILFVVENNK 197 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA++ K+G +F +PG +VDGMD+ AV+ KA+A RA +GP +IE Sbjct: 198 WAIGMAHERATSDPEIYKKGPAFGMPGYEVDGMDVLAVREVAQKAIARARAGEGPTLIEA 257 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R R+E E DPI + L + A +LK I+ V+ + Sbjct: 258 LTYRFRGHSLADPDELRDRDE-KEFWFARDPINKFFAYLTEHNLADSDELKAIDKKVQDL 316 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 IN++VEFAQ+ EPDP+ELY I Sbjct: 317 INDAVEFAQTSPEPDPSELYRYI 339 >gi|170076981|ref|YP_001733619.1| pyruvate dehydrogenase E1 component, alpha chain [Synechococcus sp. PCC 7002] gi|169884650|gb|ACA98363.1| pyruvate dehydrogenase E1 component, alpha chain [Synechococcus sp. PCC 7002] Length = 343 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 139/326 (42%), Positives = 207/326 (63%), Gaps = 9/326 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KE+ L Y M L R FE+K ++Y G + GF HL GQEAV G+ S+ +G+ Sbjct: 16 EITKEEALMLYEDMTLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIRSMRQGEDF 75 Query: 106 I-TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + YR+H H L+ GV A ++MAEL G++ G SKG+GGSMHMFS ++G GG+ +G + Sbjct: 76 VCSTYRDHVHALSAGVPAREVMAELFGKETGCSKGRGGSMHMFSKEHGLLGGYAFIGEGI 135 Query: 165 SLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + G A +KYR+ +D + FGDG +N GQ +E+ N+AALW L +++V+EN Sbjct: 136 PVAAGAALQSKYRQEVMGNKNADNVTACFFGDGTSNNGQFFETLNMAALWKLPILFVVEN 195 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G + RA++Q K+ F +PG +VDGMD+ A++ KAVA RA +GP +I Sbjct: 196 NKWAIGMAHERATSQPEIYKKASVFGMPGYEVDGMDVLAMRDVAQKAVARARAGEGPTLI 255 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP R+ EE E + DPI++ K + + A+ +LK IE ++ Sbjct: 256 EALTYRFRGHSLADPDELRSAEE-KEFWAQRDPIKRFEKFVTNRGLATAEELKAIEKKIQ 314 Query: 338 KIINNSVEFAQSDKEPDPAELYSDIL 363 +++N SV FA+S EP+PAEL I Sbjct: 315 EVVNESVTFAESSPEPNPAELRKYIF 340 >gi|115390821|ref|XP_001212915.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114193839|gb|EAU35539.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 405 Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 148/322 (45%), Positives = 205/322 (63%), Gaps = 7/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K++ Y M+ +RR E A +LY + GFCHL GQEAV G++ +++ D++ Sbjct: 69 EVTKKELKQMYYDMVSMRRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAISRDDKV 128 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG L G I+ EL GR+ GI+ GKGGSMHMF+ FYGG+GIVGAQV Sbjct: 129 ITAYRCHGFALMRGGTVRSIIGELLGRREGIAYGKGGSMHMFAPN--FYGGNGIVGAQVP 186 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+AFA +Y +V +GDGA+NQGQV+E+FN+A LW L V++ ENN+Y MGTS Sbjct: 187 VGAGLAFAQQYNEEKTTSIVLYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTS 246 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +R+SA T + KRG IPG++V+GMD+ A KA + Y A GP++ E +TYRY Sbjct: 247 AARSSALTEYYKRGQY--IPGIKVNGMDVLATKAAVKYGKDYAVAGNGPLVFEYVTYRYG 304 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YR+REEI MRS +DPI +++++L SE +LK ++ R ++ V Sbjct: 305 GHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKILDWSVMSEDELKALDKAARAHVDEEV 364 Query: 345 EFAQSDKEPDPAE--LYSDILI 364 A++ PD L+ DI + Sbjct: 365 AIAENMAVPDNNSRILFEDIYV 386 >gi|89890163|ref|ZP_01201674.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase E1 component [Flavobacteria bacterium BBFL7] gi|89518436|gb|EAS21092.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase E1 component [Flavobacteria bacterium BBFL7] Length = 332 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 202/321 (62%), Gaps = 4/321 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG--MKMSLTE 101 + + K+ L+ Y ML R+FE+K Q+Y V GF HL GQEA++ G M LT+ Sbjct: 1 MKKVTKDVLLNWYEEMLFWRKFEDKLAQVYIQQKVRGFLHLYNGQEAILAGSLHAMDLTK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MITAYR H + GVD ++MAEL G+ G S+G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 -DKMITAYRNHVQPIGMGVDPKRVMAELYGKATGTSQGLGGSMHIFSKEHRFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG GIAF +KY D + + FGDGAA QG ++E+FN+A LWNL V++ +ENN YA Sbjct: 120 GQIPLGAGIAFGDKYHNVDAVTLTFFGDGAARQGSLHEAFNLAMLWNLPVVFCVENNGYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV R + T+ K G+ + +P VD MD V M +A+ R+ GP +E+ T Sbjct: 180 MGTSVERTANHTDIWKLGLGYEMPCGPVDAMDPEKVAEAMSEAIERARSGGGPTFLELKT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD +YRT++E+ E + DPI QV+ RL+ + SE ++ I+ V+ + Sbjct: 240 YRYRGHSMSDAQHYRTKDEVAEYQKI-DPITQVKDRLVKDHGLSEDEINVIDKRVKARVA 298 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 +FA+ P+ + +Y + Sbjct: 299 ECEKFAEDSPYPEKSVMYDAV 319 >gi|149370877|ref|ZP_01890472.1| pyruvate dehydrogenase E1 component alpha subunit [unidentified eubacterium SCB49] gi|149355663|gb|EDM44221.1| pyruvate dehydrogenase E1 component alpha subunit [unidentified eubacterium SCB49] Length = 332 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 142/319 (44%), Positives = 199/319 (62%), Gaps = 4/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM--KMSLTE 101 + + ++ L Y ML R+FE+K Q+Y V GF HL GQEAV+ G M L++ Sbjct: 1 MKKITRKTYLDWYENMLFWRKFEDKLAQVYINQKVRGFLHLYNGQEAVLAGALHAMDLSK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MITAYR H + GVD ++MAEL G+ G S G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 -DKMITAYRNHVQPIGMGVDPKRVMAELYGKATGTSNGLGGSMHIFSKEHRFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG G+AFA+KY+ + + + GDGA QG ++E+FN+A LW L V++ ENN YA Sbjct: 120 GQIPLGAGLAFADKYKGDNAVTLCYMGDGAVRQGSLHETFNMAMLWKLPVVFCCENNGYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV RA+ T+ K G+ + +P VDGM V MD+A+ R +GP +E+ T Sbjct: 180 MGTSVERAANHTDIYKLGLGYEMPCKPVDGMKPEVVAKEMDEAMERARRGEGPTFLEIRT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD +YRT+EE+ + + DPI V + NKWA+E +++EI+ V+ + Sbjct: 240 YRYRGHSMSDAQHYRTKEEVAK-KQEEDPISYVLHNIYENKWATEAEIQEIDKRVKDKVT 298 Query: 342 NSVEFAQSDKEPDPAELYS 360 +FA PD + +Y Sbjct: 299 ACEKFADESPYPDKSVMYD 317 >gi|88802337|ref|ZP_01117864.1| Pyruvate dehydrogenase E1 component, alpha subunit [Polaribacter irgensii 23-P] gi|88781195|gb|EAR12373.1| Pyruvate dehydrogenase E1 component, alpha subunit [Polaribacter irgensii 23-P] Length = 329 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 140/319 (43%), Positives = 201/319 (63%), Gaps = 4/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM--KMSLTE 101 + + K+ L Y+ ML R+FE+K +Y V GF HL GQEA++ G M L++ Sbjct: 1 MKKITKQTYLDWYKDMLFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAILAGALHAMDLSK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MITAYR H + G D K+MAEL G+ G SKG GGSMH+FS + FYGGHGIVG Sbjct: 61 -DRMITAYRNHVQPIGMGEDPKKVMAELFGKVTGTSKGMGGSMHIFSKEFRFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG G+AFA+KY+ SD + + CFGDGAA QG ++E+FN+A LW L V++++ENN YA Sbjct: 120 GQIPLGAGLAFADKYKGSDAVTLTCFGDGAARQGSLHEAFNMAMLWKLPVVFIVENNGYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV R + T+ K G+ + +P VD M+ V +D+A+ R GP +EM T Sbjct: 180 MGTSVERTANHTDIWKLGLGYEMPCGPVDAMNPIKVAEAVDEAIQRARRGDGPTFLEMKT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD YRT++E+ E + DPI Q+ + ++A+ ++ I+ +V+ + Sbjct: 240 YRYRGHSMSDAQKYRTKDEVEEYKKI-DPITQILNVIKEKEYATAEEIAIIDKDVKARVK 298 Query: 342 NSVEFAQSDKEPDPAELYS 360 +FA+ P+P ++Y Sbjct: 299 ECEKFAEDSPYPEPQQMYD 317 >gi|110350559|emb|CAK50800.1| pyruvate dehydrogenase E1 alpha 2 [Mesocricetus auratus] Length = 376 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 149/314 (47%), Positives = 202/314 (64%), Gaps = 6/314 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L YR M +IRR E KA Q+Y + GFCHLC GQEA VG++ + D +I Sbjct: 57 LTREEALKYYRAMQVIRRMELKADQMYKQKFIRGFCHLCDGQEACSVGLEAGIRPSDHII 116 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR HG G+ I+AELTGR+GG +KGKGGSMHM++ KN FYGG+GIVGAQV L Sbjct: 117 TSYRAHGLCYTRGLPVRSILAELTGRRGGCAKGKGGSMHMYA-KN-FYGGNGIVGAQVPL 174 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AFA Y + +IC+ +GDGAANQGQV E++N++ALW L E + Sbjct: 175 GAGVAFACTYLGNTEICLTVYGDGAANQGQVAEAYNLSALWKLPCSLSSERIATTQWARL 234 Query: 227 SR-ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 SR T++ KRG +F IPG + +GMDI V+ A YCR+ KGPI++E+ TYRY Sbjct: 235 SREQQPNTDYHKRG-NF-IPGRKANGMDILCVREATKFAAHYCRSGKGPILLELQTYRYH 292 Query: 286 GHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS SDP +YRTREE+ MRS DPI +++R ++ ++ + KEI+ + +K I + Sbjct: 293 GHSKSDPGISYRTREEVQSMRSKSDPIMLLQERRRNSNRSNVEEWKEIDADGKKEIEEAA 352 Query: 345 EFAQSDKEPDPAEL 358 +FA +D EP EL Sbjct: 353 QFATTDPEPALEEL 366 >gi|302510667|ref|XP_003017285.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Arthroderma benhamiae CBS 112371] gi|291180856|gb|EFE36640.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Arthroderma benhamiae CBS 112371] Length = 442 Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 157/358 (43%), Positives = 219/358 (61%), Gaps = 32/358 (8%) Query: 35 DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 D PF E FE E + K++ Y M+ IRR E A +LY + G Sbjct: 70 DKPFSVKLSDESFETYELDPPPYTLKTTKKELKQMYYDMVSIRRMEMAADRLYKEKKIRG 129 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEAV G++ ++T D++ITAYR HG + G I+ EL GR+ GI+ GK Sbjct: 130 FCHLSTGQEAVATGIEHAITPDDKLITAYRCHGFAMMRGGTVRSIIGELLGRREGIAYGK 189 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMF+ KN F+GG+GIVGAQV +G G+AFA +Y + +GDGA+NQGQV+E+ Sbjct: 190 GGSMHMFA-KN-FFGGNGIVGAQVPVGAGLAFAQQYNGEANTTICLYGDGASNQGQVFEA 247 Query: 201 FNIAALWNLNVIYVIE-----------NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 FN+A LWNL VI+ E +N+Y MGT+ +R+SA T++ KRG IPG+++ Sbjct: 248 FNMAKLWNLPVIFGCESTFQIVFYPFLDNKYGMGTAANRSSALTDYYKRGQY--IPGIKI 305 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNH 308 +GMD+ A+KA + Y + +GP++ E +TYRY GHSMSDP YRTREEI MRS + Sbjct: 306 NGMDVLAIKAAVQYGREYTVSGQGPLVFEYVTYRYGGHSMSDPGTTYRTREEIQRMRSTN 365 Query: 309 DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--PAELYSDILI 364 DPI ++++LL SE +LK I+ + R +++ V A+ PD P L+ DI + Sbjct: 366 DPIAGLKQKLLDWNITSEEELKAIDKDARSMVDEEVAIAEKMPVPDATPRILFEDIYV 423 >gi|72163448|ref|YP_291105.1| pyruvate dehydrogenase (lipoamide) [Thermobifida fusca YX] gi|71917180|gb|AAZ57082.1| pyruvate dehydrogenase (lipoamide) [Thermobifida fusca YX] Length = 365 Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 147/341 (43%), Positives = 205/341 (60%), Gaps = 16/341 (4%) Query: 22 SAKRAATSSVDCVDIPFLEGFEVSEFNKEQE---LSAYRLMLLIRRFEEKAGQLYGMGMV 78 S +RAA ++ D S FN E+ L YR MLLIRRFEE+A Q Y + Sbjct: 15 SRRRAARNNAD------------SHFNGEKPEVLLDYYRQMLLIRRFEERAAQAYTQARI 62 Query: 79 GGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK 138 GG+CHL +G+EA IVG+ +L E D + T YREHG+ +A G ++MAEL GR G+SK Sbjct: 63 GGYCHLNLGEEATIVGLMEALQERDYLFTNYREHGYAIAKGTHPREVMAELYGRSTGVSK 122 Query: 139 GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 G GGSMH+F + GG+GIVG Q+ L G A A YR SD++ + GDG N G + Sbjct: 123 GWGGSMHLFDARTRLLGGYGIVGGQLPLAVGAALAITYRGSDEVVMCQMGDGTTNIGAFH 182 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 ES NIA+LWNL VI+V+ NN MGT V R+SA+ KRG ++ I G++VDG D+ AV+ Sbjct: 183 ESLNIASLWNLPVIFVVINNFTGMGTPVERSSAEPELYKRGSAYRIEGVRVDGRDVLAVR 242 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 T V R+ P ++E +YR +GHS+ DPA YRT+EE E +N DPI +RL Sbjct: 243 DTATTLVERARSEHRPFLLEAFSYRMKGHSVVDPAKYRTKEEAEEALAN-DPIAMFEERL 301 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 ++ KEI +V+ + ++ +FA++ P+ + L+ Sbjct: 302 TEAGILTDEIKKEIAESVKAEVADAADFAENSPHPEVSTLF 342 >gi|126662323|ref|ZP_01733322.1| pyruvate dehydrogenase E1 component alpha subunit [Flavobacteria bacterium BAL38] gi|126625702|gb|EAZ96391.1| pyruvate dehydrogenase E1 component alpha subunit [Flavobacteria bacterium BAL38] Length = 332 Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 146/315 (46%), Positives = 199/315 (63%), Gaps = 4/315 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM--KMSLTEGDQM 105 +E L Y ML R+FE+K +Y V GF HL GQEAV+ G M L++ D+M Sbjct: 5 TREVYLKWYEDMLFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVLAGALHAMDLSK-DKM 63 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR H + GVD K+MAEL G+ G SKG GGSMH+FS ++GFYGGHGIVGAQ+ Sbjct: 64 ITAYRNHVQPIGMGVDPKKVMAELYGKVTGTSKGMGGSMHIFSKEHGFYGGHGIVGAQIP 123 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G GIAFA+KY + + + FGDGAA QG ++E+FN+A LW L V++++ENN YAMGTS Sbjct: 124 VGAGIAFADKYFETGGVTLTYFGDGAARQGSLHEAFNMAMLWKLPVVFIVENNGYAMGTS 183 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R + T+ K G+ + +P VDGM+ V M +A+ R GP +EM TYRYR Sbjct: 184 VERTANHTDIWKLGLGYEMPCGPVDGMNPIKVAEAMHEAIERARRGDGPTFLEMKTYRYR 243 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSD YRT++E+ E R DPI QV + N +A+E +++ I+ V ++ + Sbjct: 244 GHSMSDAQLYRTKDEVEEYRKI-DPITQVLDIIKENNYATETEIEVIDKRVADLVAECEK 302 Query: 346 FAQSDKEPDPAELYS 360 FA+ P+ +LY Sbjct: 303 FAEESPFPEVNQLYD 317 >gi|86132118|ref|ZP_01050714.1| pyruvate dehydrogenase E1 component, alpha subunit [Dokdonia donghaensis MED134] gi|85817452|gb|EAQ38632.1| pyruvate dehydrogenase E1 component, alpha subunit [Dokdonia donghaensis MED134] Length = 332 Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 142/319 (44%), Positives = 204/319 (63%), Gaps = 4/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG--MKMSLTE 101 + + KE L+ Y ML R+FE+K Q+Y V GF HL GQEA++ G M L++ Sbjct: 1 MKKITKETYLNWYEEMLFWRKFEDKLAQVYIQQKVRGFLHLYNGQEAILAGSLHAMDLSK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MITAYR H + GVD ++MAEL G+ G S+G GGSMH+FS + GFYGGHGIVG Sbjct: 61 -DKMITAYRNHVQPIGMGVDPKRVMAELYGKGTGTSQGLGGSMHIFSKEKGFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG G+AF +KY ++ + + FGDGAA QG ++E+FN+A LW L V++ +ENN YA Sbjct: 120 GQIPLGAGMAFGDKYNKTGAVTLCYFGDGAARQGSLHETFNMAMLWKLPVVFCVENNGYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV+R + + K G+ + +P VD M+ AV MD+A+ R GP +E+ T Sbjct: 180 MGTSVARTANHEDIWKLGLGYEMPCGPVDAMNPVAVAEAMDEAIERARRGDGPTFLELKT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD +YRT++E+ E + DPI QV++ +L +A++ ++ E+ NV+K + Sbjct: 240 YRYRGHSMSDAQHYRTKDEVAEYQKI-DPITQVKEVILEKGYATQEEIDEMGKNVKKRVA 298 Query: 342 NSVEFAQSDKEPDPAELYS 360 +FA+ PD +Y Sbjct: 299 ECEKFAEESPFPDVNVMYD 317 >gi|195131187|ref|XP_002010032.1| GI14911 [Drosophila mojavensis] gi|193908482|gb|EDW07349.1| GI14911 [Drosophila mojavensis] Length = 461 Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 152/318 (47%), Positives = 202/318 (63%), Gaps = 6/318 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E ++E L Y M+ +RR E +Y + GFCHL GQEAV VGM L + D + Sbjct: 22 ELSREDALKMYTQMVEVRRIEVVCNNMYKAKHIRGFCHLYNGQEAVAVGMCAVLQKKDSV 81 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR H GV A ++AEL G + G S+GKGGSMH + + FYGG+GIVGAQV Sbjct: 82 ITAYRAHAWTYLMGVSAYGLIAELVGVKTGCSRGKGGSMHTYG--DNFYGGNGIVGAQVP 139 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIA A++Y+ +CV +GDGA+NQGQV+E++N+A LW L I+V ENNQY MGTS Sbjct: 140 LGAGIALAHRYKGDGGVCVALYGDGASNQGQVFEAYNMAKLWGLPCIFVCENNQYGMGTS 199 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + R +A T+F RG IPG+ VDG + AV++ AV + R + GPI++EM TYRY Sbjct: 200 IDRHAALTDFYMRGQY--IPGLWVDGNQVLAVRSATQFAVDHAR-NCGPIVLEMNTYRYE 256 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YR+R E+ +RS DPIE RK++L A E +LK+I+ VRK + Sbjct: 257 GHSMSDPGTAYRSRNEVKTIRSKRDPIESFRKQILQLCLADEEELKKIDAKVRKDLQAIS 316 Query: 345 EFAQSDKEPDPAELYSDI 362 + +D+E EL +DI Sbjct: 317 KKILADREVGLDELAADI 334 >gi|225166264|ref|ZP_03727963.1| Pyruvate dehydrogenase (acetyl-transferring) [Opitutaceae bacterium TAV2] gi|224799494|gb|EEG18024.1| Pyruvate dehydrogenase (acetyl-transferring) [Opitutaceae bacterium TAV2] Length = 365 Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 140/319 (43%), Positives = 203/319 (63%), Gaps = 2/319 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ + YR M+ IRRFEE++ + Y +GGF HL IGQEAV VG + E D Sbjct: 29 ADLTPAARIELYRTMVRIRRFEERSLRAYQAKKIGGFLHLYIGQEAVAVGCCSLMGEHDH 88 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR+HGH +A G+D +MAEL G+ G SKGKGGSMH F ++GGHGIVG Q+ Sbjct: 89 VITAYRDHGHAIAVGMDTKALMAELYGKATGCSKGKGGSMHYFDPSKNYWGGHGIVGGQI 148 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LGTG+A+A KYR + GDGA NQG V+E++N+AALW+L I+VIENN Y+MGT Sbjct: 149 PLGTGLAYAVKYRGLKGSAMAFMGDGAVNQGAVHEAYNLAALWDLPCIFVIENNGYSMGT 208 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S +R+SA + R +++ ++G D+ V+A M + R + P ++E+ TYRY Sbjct: 209 SQARSSAG-ELATRAAGYDMKWETINGHDLYEVRAKMHALLTRAREEQKPAVVEIDTYRY 267 Query: 285 RGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 RGHS++DP YRTR+EI E R DPI ++ LL K ++ ++EI+ R +++ Sbjct: 268 RGHSVADPDKTYRTRDEIEEYRKTKDPINLFQQTLLAEKVLTDALIEEIDTAARAEADHA 327 Query: 344 VEFAQSDKEPDPAELYSDI 362 +FA++ P PA++ +D+ Sbjct: 328 ADFAEASPFPTPADIQTDV 346 >gi|302780635|ref|XP_002972092.1| hypothetical protein SELMODRAFT_96403 [Selaginella moellendorffii] gi|302781718|ref|XP_002972633.1| hypothetical protein SELMODRAFT_97821 [Selaginella moellendorffii] gi|300160100|gb|EFJ26719.1| hypothetical protein SELMODRAFT_97821 [Selaginella moellendorffii] gi|300160391|gb|EFJ27009.1| hypothetical protein SELMODRAFT_96403 [Selaginella moellendorffii] Length = 389 Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 144/316 (45%), Positives = 205/316 (64%), Gaps = 3/316 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++E+ + YR M IRR E A +L+ +V GFCHL GQEAV +GM+ +LT D +IT Sbjct: 54 SREELVKMYRDMFRIRRMEITADKLFKSQLVRGFCHLYDGQEAVTIGMEAALTYEDTVIT 113 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR+H L G + AEL GR G ++GKGGSMH++ N FYGG GIVG LG Sbjct: 114 AYRDHATFLGRGGTVHECFAELMGRSTGCARGKGGSMHLYKPSNNFYGGWGIVGTTGPLG 173 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+AFANKY + + + + +GDGA NQGQ++E+ N+A LW+L +I+++ENN Y MGT+ Sbjct: 174 AGLAFANKYEKKNNVAMAIYGDGAGNQGQLFEAKNMAGLWDLPLIFLVENNHYGMGTAEW 233 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RAS +T F R VS+ IPG++VDGMD AVK A +C + KGPI++E TYRY GH Sbjct: 234 RASKKTTFYDR-VSY-IPGIKVDGMDAFAVKEATRFAKEHCLSGKGPIVLEADTYRYHGH 291 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP + YRTR EI +R DPIE+++K ++ E + K ++ +++ ++++ Sbjct: 292 SMSDPGSTYRTRNEIQGVRQERDPIERIKKLMIKENVMREEEFKAVDKEIKQEVDDAAAK 351 Query: 347 AQSDKEPDPAELYSDI 362 A+ D P EL+ +I Sbjct: 352 AKDDPNPGEEELFMNI 367 >gi|2623175|gb|AAB86816.1| pyruvate dehydrogenase E1 component alpha subunit [Scheffersomyces stipitis] Length = 396 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 148/335 (44%), Positives = 206/335 (61%), Gaps = 15/335 (4%) Query: 21 VSAKRAATSSVDCVDIPF----LEGFEVS------EFNKEQELSAYRLMLLIRRFEEKAG 70 V A+RA SS D V I EG+ + E KE L Y+ M++I E + Sbjct: 15 VIARRAMASSSDLVSIELPESSFEGYNLEIPELTFETEKETLLKMYKGMIIIGGMEMASD 74 Query: 71 QLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELT 130 LY + GFCHL +GQEA+ VG++ ++T D +IT+YR HG G +++ EL Sbjct: 75 ALYKAKKIRGFCHLSVGQEAIAVGIENAITPEDTVITSYRCHGFAFMRGASVKEVLGELM 134 Query: 131 GRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDG 190 G++ G+S GKGGSMHMF+ GFYGG+GIVGAQV LG G+AF++KYR +GDG Sbjct: 135 GKRSGVSYGKGGSMHMFAP--GFYGGNGIVGAQVPLGAGLAFSHKYRGQKAAAFTLYGDG 192 Query: 191 AANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD 250 A+NQGQV+E++N+A LWNL I+ ENN+Y MGT+ +R+SA T + KRG IPG++++ Sbjct: 193 ASNQGQVFEAYNMAKLWNLPCIFACENNKYGMGTAAARSSAITEYYKRGQY--IPGLKIN 250 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHD 309 GMD+ A A + GP+++E TYRY GHSMSDP YRTREE+ MRS +D Sbjct: 251 GMDVLATYQASKFAKDWAAQGNGPLVLEYETYRYGGHSMSDPGTTYRTREEVQHMRSRND 310 Query: 310 PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 PI ++ LL A+E ++K + RK ++ V Sbjct: 311 PIAGLKATLLDKGIATEEEIKSYDKAARKYVDEQV 345 >gi|320102389|ref|YP_004177980.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Isosphaera pallida ATCC 43644] gi|319749671|gb|ADV61431.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Isosphaera pallida ATCC 43644] Length = 534 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 143/318 (44%), Positives = 201/318 (63%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++Q + YR ML IRRFEE++ LY + GF HL GQE V VG +L D +IT Sbjct: 199 TRDQAIGWYRTMLQIRRFEERSAMLYQQSKIKGFLHLYSGQEPVAVGSIGALRPDDYVIT 258 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR+HGH LA G+ A MAE+ G+ G ++GKGGSMH F N F GGH IVG V L Sbjct: 259 AYRDHGHALARGMSAKAGMAEMLGKVTGCARGKGGSMHFFDAANRFLGGHAIVGGHVPLA 318 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+AFA KY+ D++C+ FGDGA NQG V+E+FN+AA+W VI+V+ENN Y+MGTS+ Sbjct: 319 LGVAFAMKYQGLDQVCLCFFGDGAMNQGPVHEAFNMAAMWKCPVIFVVENNLYSMGTSLE 378 Query: 228 RASAQTNFSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+S T+ + R G ++ IPG++V+G D+ V +A A RA +GP +E++TYR+RG Sbjct: 379 RSSCLTDLTIRGGTAYGIPGIKVNGNDVEEVYRVTWEAAARARAGEGPSFLEIITYRHRG 438 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDP YRT EE+ E + DP +L W + ++ + +++ I+ ++ F Sbjct: 439 HSMSDPGKYRTAEELEEAK-RRDPNVAYGLKLKERGWLDDAQIEALHEEIKQEIDEAIAF 497 Query: 347 AQSDKEPDPAELYSDILI 364 A+ EP +LY DI + Sbjct: 498 AEESPEPPMEQLYQDITV 515 >gi|145341086|ref|XP_001415646.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144575869|gb|ABO93938.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 358 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 141/312 (45%), Positives = 201/312 (64%), Gaps = 3/312 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 ++ E K + + + ++RR E A LY + GFCHL GQEAV VGM+ +L + Sbjct: 19 QMVETTKSEIIDMFTQAYMMRRLEIAADVLYKGKFIRGFCHLYDGQEAVCVGMEAALNKQ 78 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D ++T+YR+H L G ++MAEL GR G +KG GGSMHM+ + F+GG+GIVGA Sbjct: 79 DAVVTSYRDHCIHLGRGGTPLEVMAELMGRVDGAAKGIGGSMHMYRREANFFGGNGIVGA 138 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q ++G G+ FA KY + + V +GDGAANQGQ++E+ N+AALW+L VI++ ENN Y M Sbjct: 139 QTAIGAGLGFAFKYNKQPNVAVTMYGDGAANQGQLFEALNMAALWDLPVIFMCENNHYGM 198 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GT+ R++ + KRG +PG++VDGMD AVK M A YC A GPI++EM TY Sbjct: 199 GTAQDRSAKSPVYYKRGDY--VPGLKVDGMDALAVKQAMKFAKEYCVAGNGPIVMEMDTY 256 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI +R DP+E++RK + + +K+IE R+I++ Sbjct: 257 RYHGHSMSDPGSTYRTRDEITGIRQERDPVERLRKLITEHNLLDATQIKQIEKEQRRIVD 316 Query: 342 NSVEFAQSDKEP 353 +VE A++ P Sbjct: 317 EAVEQAKASPLP 328 >gi|54289521|gb|AAV32067.1| pyruvate dehydrogenase E1 alpha subunit [Nyctotherus ovalis] Length = 299 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 138/279 (49%), Positives = 195/279 (69%), Gaps = 4/279 (1%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 GQEAV VG++ +T+ D +ITAYR HG +L G A++++AE+ G+ G SKGKGGSMHM Sbjct: 3 GQEAVSVGVEAGITKEDHLITAYRCHGVLLGRGETAARLIAEMMGKATGASKGKGGSMHM 62 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 KN FYGG+GIVGA + LGTGIAF Y + ++CV +GDGA+NQGQ++E+ N+A L Sbjct: 63 SLRKNKFYGGNGIVGAHIPLGTGIAFGINYEKKKEVCVTMYGDGASNQGQLFEAANMALL 122 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 W L +IY+ ENN YAMGT+ +RA+ T + + IPG++ DGMD+ AV+ + A Sbjct: 123 WKLPIIYLCENNLYAMGTACARATPNTKYYTKLAP--IPGIKGDGMDLFAVREIIKFARE 180 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 +C + KGPI +E+ TYRY GHSMSDP +YR+REEI ++R DPI +V+K +L NK A+ Sbjct: 181 WCLSGKGPICLELETYRYHGHSMSDPGLSYRSREEIAQVRKERDPIAKVKKIILDNKLAT 240 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDP-AELYSDIL 363 E +LKEIE RK++++ A+ PDP +L +D++ Sbjct: 241 EDELKEIEKETRKVVDDVTLKAREAPWPDPEKDLLTDVM 279 >gi|317032267|ref|XP_001394447.2| pyruvate dehydrogenase E1 component subunit alpha [Aspergillus niger CBS 513.88] Length = 400 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 153/320 (47%), Positives = 204/320 (63%), Gaps = 9/320 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K Q Y M LIRR E A +LY + GFCHL GQEAV VG++ ++ D++ Sbjct: 64 ETTKSQLKQLYYDMSLIRRMELAADKLYKEQKIRGFCHLSTGQEAVAVGVEHGISPEDKV 123 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG L G I+ EL GR+ GI GKGGS+HMF TKN F+GG+GIVG+ V Sbjct: 124 ITAYRAHGFTLMRGGSVKSIIGELLGRRDGICHGKGGSVHMF-TKN-FFGGNGIVGSNVP 181 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTGIAFA +Y + K+ V +GDGAANQGQV+E++N+A LW L VI+ ENN+Y MGTS Sbjct: 182 LGTGIAFAQQYDDTKKVTVNLYGDGAANQGQVHEAYNMAKLWELPVIFGCENNKYGMGTS 241 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V RASA T + KRG + IPG++++GMD+ AV A M Y GP++ E TYRY Sbjct: 242 VERASAMTEYYKRG--YYIPGLRINGMDVLAVIAAMKYGKDYVLGGNGPLLYEFQTYRYA 299 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS+SDP YR+R+E+ R+N DPI R++++ SE D+K ++ +R ++ Sbjct: 300 GHSVSDPGTAYRSRDEVQAERAN-DPITTYREKMIEWGVLSEDDVKTMDKEIRSKVDREA 358 Query: 345 EFAQSDKEPDPAELYSDILI 364 + A+ EP L SD+L Sbjct: 359 QEAEKMAEP---PLNSDVLF 375 >gi|325286973|ref|YP_004262763.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Cellulophaga lytica DSM 7489] gi|324322427|gb|ADY29892.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cellulophaga lytica DSM 7489] Length = 332 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 145/318 (45%), Positives = 200/318 (62%), Gaps = 4/318 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG--MKMSLTE 101 + + KE L+ Y+ ML R+FE+K +Y V GF HL GQEAV+ G M LT+ Sbjct: 1 MKKITKEVYLNWYKDMLFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVLAGSLHAMDLTK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MITAYR H + GVD K+MAEL G+ G SKG GGSMH+FS ++ FYGGHGIVG Sbjct: 61 -DKMITAYRNHVQPIGMGVDPKKVMAELYGKVTGTSKGMGGSMHIFSKEHRFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG G+AF +KY +D + + GDGA QG ++E+FN+A LW L V+++ ENN YA Sbjct: 120 GQIPLGAGLAFGDKYAGNDAVTLCYMGDGAVRQGSLHETFNLAMLWQLPVVFICENNGYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV R S T K G+ + +P V+GM+ V + KAV R+ GP +E+ T Sbjct: 180 MGTSVERTSHSTEIWKLGLGYEMPCKAVEGMNPVTVAEEVSKAVERARSGGGPTFLEIKT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD +YRT+ E+ E + DPI QV + NK+A++ ++ I+ V++++ Sbjct: 240 YRYRGHSMSDAQHYRTKAEVEEYKKI-DPITQVLDVIKENKYATDDEISAIDKEVKRMVK 298 Query: 342 NSVEFAQSDKEPDPAELY 359 EFA+S P +LY Sbjct: 299 ECEEFAESSDYPPVNQLY 316 >gi|284929317|ref|YP_003421839.1| pyruvate dehydrogenase E1 component subunit alpha [cyanobacterium UCYN-A] gi|284809761|gb|ADB95458.1| pyruvate dehydrogenase E1 component, alpha subunit [cyanobacterium UCYN-A] Length = 343 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 140/322 (43%), Positives = 207/322 (64%), Gaps = 9/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +K++ L Y M+L R FE+K ++Y G + GF HL GQEA+ G+ +L G+ Sbjct: 16 QLSKDEGLMLYEDMILGRLFEDKCAEMYYRGKMFGFVHLYNGQEAISTGIIKALRSGEDY 75 Query: 106 I-TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 I + YR+H H L+CG+ +IMAEL G++ G SKG+GGSMH+FS K+ F GG+ V + Sbjct: 76 IASTYRDHVHALSCGIPPREIMAELFGKETGCSKGRGGSMHLFSKKHRFLGGYAFVAEGI 135 Query: 165 SLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + TG AF NKYR +D++ FGDGA+N GQ YE N+AALW L +IYV+EN Sbjct: 136 PVATGAAFQNKYRHQVMGDDNADQVTACFFGDGASNNGQFYECLNMAALWKLPIIYVVEN 195 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G S RA++Q K+ FN+ G++VDGMD+ AV+ +AVA RA +GP +I Sbjct: 196 NKWAIGMSHDRATSQPEIYKKASVFNMVGVEVDGMDVLAVRQVAKEAVARARAGEGPTLI 255 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP R +E + DPI+++ L++ AS+ +L I+ V+ Sbjct: 256 EALTYRFRGHSLADPDELRKLDE-KKFWEQKDPIQKLSNYLINQNIASQTELDTIQEKVK 314 Query: 338 KIINNSVEFAQSDKEPDPAELY 359 II+++VEFA++ +P ELY Sbjct: 315 IIIDDAVEFAENSPDPKTNELY 336 >gi|134079130|emb|CAK45942.1| unnamed protein product [Aspergillus niger] Length = 403 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 153/320 (47%), Positives = 204/320 (63%), Gaps = 9/320 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K Q Y M LIRR E A +LY + GFCHL GQEAV VG++ ++ D++ Sbjct: 67 ETTKSQLKQLYYDMSLIRRMELAADKLYKEQKIRGFCHLSTGQEAVAVGVEHGISPEDKV 126 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG L G I+ EL GR+ GI GKGGS+HMF TKN F+GG+GIVG+ V Sbjct: 127 ITAYRAHGFTLMRGGSVKSIIGELLGRRDGICHGKGGSVHMF-TKN-FFGGNGIVGSNVP 184 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTGIAFA +Y + K+ V +GDGAANQGQV+E++N+A LW L VI+ ENN+Y MGTS Sbjct: 185 LGTGIAFAQQYDDTKKVTVNLYGDGAANQGQVHEAYNMAKLWELPVIFGCENNKYGMGTS 244 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V RASA T + KRG + IPG++++GMD+ AV A M Y GP++ E TYRY Sbjct: 245 VERASAMTEYYKRG--YYIPGLRINGMDVLAVIAAMKYGKDYVLGGNGPLLYEFQTYRYA 302 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS+SDP YR+R+E+ R+N DPI R++++ SE D+K ++ +R ++ Sbjct: 303 GHSVSDPGTAYRSRDEVQAERAN-DPITTYREKMIEWGVLSEDDVKTMDKEIRSKVDREA 361 Query: 345 EFAQSDKEPDPAELYSDILI 364 + A+ EP L SD+L Sbjct: 362 QEAEKMAEP---PLNSDVLF 378 >gi|325955110|ref|YP_004238770.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Weeksella virosa DSM 16922] gi|323437728|gb|ADX68192.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Weeksella virosa DSM 16922] Length = 333 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 140/319 (43%), Positives = 197/319 (61%), Gaps = 1/319 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + KE L Y+ M RRFE+K LY + GF HL GQEA+ G ++ +GD Sbjct: 1 MEKLTKETYLQWYKEMTFWRRFEDKCRSLYLKQKIRGFLHLYNGQEALPAGFLHAMQKGD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ITAYR H +A GVD ++MAEL G+ G SKG GGSMH+FS ++ F+GGHGIVG Q Sbjct: 61 RVITAYRCHIWPMAMGVDPKEVMAELCGKATGTSKGLGGSMHIFSKEHNFFGGHGIVGGQ 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + LG G+AF +KY + + + GDGA QG ++E+FN+A W L V++V ENNQYAMG Sbjct: 121 IPLGAGMAFGDKYNGKNHVTICLMGDGATRQGVLHETFNMAMNWKLPVVFVCENNQYAMG 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV R + + K G+ +++P VDGMD V +A+ R GP +++ TYR Sbjct: 181 TSVKRTANHEDIWKLGLGYDMPSYPVDGMDPVKVAEAAYEAIERARRGDGPTFLDVRTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSD YRT+EE+ E + DPI V+ LL NKWA++ +L + V+K + Sbjct: 241 YRGHSMSDAEPYRTKEEVEEYKQE-DPILHVQSHLLANKWATQEELDNMVEEVKKEVEAC 299 Query: 344 VEFAQSDKEPDPAELYSDI 362 V+FA++ P+ +Y I Sbjct: 300 VDFAENSPFPEEDVMYKYI 318 >gi|302656370|ref|XP_003019939.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Trichophyton verrucosum HKI 0517] gi|291183715|gb|EFE39315.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Trichophyton verrucosum HKI 0517] Length = 416 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 156/358 (43%), Positives = 218/358 (60%), Gaps = 32/358 (8%) Query: 35 DIPFL-----EGFEVSEFN---------KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 D PF E FE E + K++ Y M+ IRR E A +LY + G Sbjct: 44 DKPFSVKLSDESFETYELDPPPYTLKTTKKELKQMYYDMVSIRRMEMAADRLYKEKKIRG 103 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEAV G++ ++T D++ITAYR HG + G I+ EL GR+ GI+ GK Sbjct: 104 FCHLSTGQEAVATGIEHAITPDDKLITAYRCHGFAMMRGGTVRSIIGELLGRREGIAYGK 163 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMF+ KN F+GG+GIVGAQV +G G+AFA +Y + +GDGA+NQGQV+E+ Sbjct: 164 GGSMHMFA-KN-FFGGNGIVGAQVPVGAGLAFAQQYNGEANTTICLYGDGASNQGQVFEA 221 Query: 201 FNIAALWNLNVIYVIE-----------NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 FN+A LWNL VI+ E +N+Y MGT+ +R+SA T++ KRG IPG+++ Sbjct: 222 FNMAKLWNLPVIFGCESTFQIVFYPFLDNKYGMGTAANRSSALTDYYKRGQY--IPGIKI 279 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNH 308 +GMD+ A+KA + Y + +GP++ E +TYRY GHSMSDP YRTREEI MRS + Sbjct: 280 NGMDVLAIKAAVQYGREYTVSGQGPLVFEYVTYRYGGHSMSDPGTTYRTREEIQRMRSTN 339 Query: 309 DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE--LYSDILI 364 DPI ++++LL SE +LK I+ + R +++ V A+ PD L+ DI + Sbjct: 340 DPIAGLKQKLLDWNITSEEELKAIDKDARSMVDEEVAIAEKMPVPDATSRILFEDIYV 397 >gi|298506480|gb|ADI85203.1| pyruvate dehydrogenase complex, E1 protein, alpha subunit [Geobacter sulfurreducens KN400] Length = 325 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 134/312 (42%), Positives = 191/312 (61%), Gaps = 1/312 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L + M+L R FEE + Y G + GF HL GQEAV VG +L + D +++AYREH Sbjct: 15 LKMHEQMVLSREFEESCAEQYTKGHITGFLHLYSGQEAVAVGATAALRKDDYILSAYREH 74 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 + G + ++MAEL G+ G+ KGKGGSMH+F F GG+ IVG Q + G+AF Sbjct: 75 AQAIVRGAEPRRVMAELFGKATGMCKGKGGSMHLFDPSLAFMGGYAIVGGQFPIAVGLAF 134 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+KYR+ +I FGDGA NQG +ES N A LW L V+++ ENN Y +GT+VSRASA Sbjct: 135 ASKYRKEGRISACFFGDGAVNQGTFHESLNWARLWELPVLFLCENNFYGIGTAVSRASAL 194 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 ++ KR ++IP ++VDGMD+ AV + + R H P +IE +TYR+RGHSM+DP Sbjct: 195 SDIHKRTCGYDIPSVRVDGMDVMAVYEAVKWGAEWVREHSRPYLIEAMTYRFRGHSMADP 254 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR+ E+ E+ + DPI RL+ A+E +L + R ++ ++V FA+ Sbjct: 255 GKYRSAAEV-ELWKSRDPIPNFENRLVEEGIATEAELAAVLEKCRGVVADAVAFAEESPW 313 Query: 353 PDPAELYSDILI 364 P+ E+YSDI + Sbjct: 314 PEDDEVYSDIYV 325 >gi|86143915|ref|ZP_01062283.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Leeuwenhoekiella blandensis MED217] gi|85829622|gb|EAQ48085.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Leeuwenhoekiella blandensis MED217] Length = 333 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 144/319 (45%), Positives = 199/319 (62%), Gaps = 4/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM--KMSLTE 101 + E KE L+ Y M R+FE+K Q+Y V GF HL GQEA++ G M LT+ Sbjct: 1 MKEITKEVYLNWYEEMSFWRKFEDKLAQVYIQQKVRGFLHLYNGQEAILAGALHAMDLTK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MITAYR H + G D ++MAEL G++ G S G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 -DKMITAYRNHVQPIGMGEDPKRVMAELYGKKTGTSMGLGGSMHIFSKEHRFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG G+AF +KY + D + + FGDGAA QG ++E+FN+A W L V++ +ENN YA Sbjct: 120 GQIPLGAGLAFGDKYFKRDAVTLTFFGDGAARQGSLHETFNMAMNWKLPVVFCVENNGYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV R + + K G+ + +P VD M+ AV D+A+A R GP +E+ T Sbjct: 180 MGTSVKRTANHEDIWKLGLGYEMPCGPVDAMNPVAVAEAFDEAIARARRGDGPTFLELKT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD YRT++E+ E + DPI QV+ LL K+A+E +LK I+ V+K + Sbjct: 240 YRYRGHSMSDAQKYRTKDEVAEYQKI-DPITQVKDILLEKKFATEEELKAIDKRVKKRVA 298 Query: 342 NSVEFAQSDKEPDPAELYS 360 +FA+ P+ +Y Sbjct: 299 ECEKFAEESDFPEKEVMYD 317 >gi|332291220|ref|YP_004429829.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Krokinobacter diaphorus 4H-3-7-5] gi|332169306|gb|AEE18561.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Krokinobacter diaphorus 4H-3-7-5] Length = 332 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 140/319 (43%), Positives = 204/319 (63%), Gaps = 4/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG--MKMSLTE 101 + + KE L+ Y ML R+FE+K Q+Y V GF HL GQEA++ G M L++ Sbjct: 1 MKKITKETYLNWYEEMLFWRKFEDKLAQVYIQQKVRGFLHLYNGQEAILAGSLHAMDLSK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MITAYR H + GVD ++MAEL G+ G S+G GGSMH+FS + GFYGGHGIVG Sbjct: 61 -DKMITAYRNHVQPIGMGVDPKRVMAELFGKATGTSQGLGGSMHIFSREKGFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG G+AF +KY ++ + + FGDGAA QG ++E+FN+A LW L V++ +ENN YA Sbjct: 120 GQIPLGAGMAFGDKYNKTGAVTLCYFGDGAARQGSLHETFNMAMLWKLPVVFCVENNGYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV+R + + K G+ + +P VD M+ AV MD+A+ R GP +E+ T Sbjct: 180 MGTSVARTANHEDIWKLGLGYEMPCGPVDAMNPVAVAEAMDEAIERARRGDGPTFLELKT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD +YRT++E+ E + DPI Q+++ +L ++A+E ++K ++ V+ + Sbjct: 240 YRYRGHSMSDAQHYRTKDEVAEYQKI-DPITQIKEIILEKEYATEEEIKVMDKRVKARVA 298 Query: 342 NSVEFAQSDKEPDPAELYS 360 +FA+ PD +Y Sbjct: 299 ECEKFAEESPFPDVNVMYD 317 >gi|300866455|ref|ZP_07111147.1| pyruvate dehydrogenase (lipoamide) [Oscillatoria sp. PCC 6506] gi|300335559|emb|CBN56307.1| pyruvate dehydrogenase (lipoamide) [Oscillatoria sp. PCC 6506] Length = 344 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 140/323 (43%), Positives = 208/323 (64%), Gaps = 9/323 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +KE+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ ++ + ++ Sbjct: 18 SKEEGLMLYEDMVLGRFFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIRAMRRDEDYVS 77 Query: 108 A-YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMH+FS ++ GG+ V + + Sbjct: 78 STYRDHVHALSAGVPAREVMAELFGKATGCSKGRGGSMHIFSAEHNLLGGYAFVAEGIPV 137 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG AFA+KYRR +D++ FGDGAAN GQ +E N+AALW L +IYV+ENN+ Sbjct: 138 ATGAAFASKYRREALGNENADQVTACFFGDGAANNGQFFECLNMAALWKLPIIYVVENNK 197 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA++ K+ +F + G +VDGMD+ AV+ +AVA RA +GP +IE Sbjct: 198 WAIGMAHDRATSDPVIYKKAHAFGMAGFEVDGMDVLAVREVAQEAVARARAGEGPTLIEA 257 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R++EE E DPI+++ L A+ +LKEIE ++ + Sbjct: 258 LTYRFRGHSLADPDELRSKEE-KEYWFPRDPIKKLAADLTERNLATVEELKEIEQKIQAL 316 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 ++++VEFA+ EPDP+ELY I Sbjct: 317 VDDAVEFAEKSPEPDPSELYRFI 339 >gi|332027176|gb|EGI67268.1| Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial [Acromyrmex echinatior] Length = 346 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 143/327 (43%), Positives = 212/327 (64%), Gaps = 12/327 (3%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 +G E S NK+ + A + M IRR E K+ +LY ++ GF HL IGQEAV VG++MSL Sbjct: 11 KGPEKSTLNKKDAIYALKTMHYIRRMENKSAELYRERLINGFLHLYIGQEAVAVGLRMSL 70 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 + D + +YR H + V + + AEL GR+ G +KGKGGSMHM++ + FYGG GI Sbjct: 71 ADQDTVAASYRCHALAVVFDVSSRAVFAELMGRKTGAAKGKGGSMHMYAPR--FYGGEGI 128 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VG QV +GTG+A A+KY + + +GDGAA+QGQ+YE++N+A LWNL +Y+ ENN+ Sbjct: 129 VGGQVPIGTGMALAHKYNGTGGVAFTLYGDGAASQGQIYEAWNMAKLWNLPAVYICENNK 188 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPII 276 Y MGT+V R SA T RG IPG++VDGM + V+ +AV + R + GPI+ Sbjct: 189 YGMGTAVHRHSANTRLYTRGDL--IPGIRVDGMKLMDVR----EAVRFSREYALRNGPIV 242 Query: 277 IEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +EM+TYR+ GHS+SDP +YR+REEI M++ DPI + K ++ +E ++++I + Sbjct: 243 LEMMTYRFYGHSISDPGLSYRSREEIKTMQTEQDPIMLLTKLVIEKGLMTEKEIEDIRTS 302 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 K ++ E A++D P+ +EL +D+ Sbjct: 303 TYKEVDEQAEQAKADAWPEMSELATDV 329 >gi|172035208|ref|YP_001801709.1| pyruvate dehydrogenase E1 component alpha subunit [Cyanothece sp. ATCC 51142] gi|171696662|gb|ACB49643.1| pyruvate dehydrogenase E1 component alpha subunit [Cyanothece sp. ATCC 51142] Length = 343 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 136/322 (42%), Positives = 210/322 (65%), Gaps = 9/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQ 104 + +E+ L Y M L R FE+K ++Y G + GF HL GQEAV G+ +L + D Sbjct: 16 QLTQEEGLMLYEDMTLGRLFEDKCAEMYYRGRMFGFVHLYNGQEAVSTGIIKALRPDEDY 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + YR+H H L+CGV ++MAEL G++ G SKG+GGSMH+FS K+ GG+ V + Sbjct: 76 VSSTYRDHVHALSCGVPPREVMAELFGKETGCSKGRGGSMHLFSEKHRLLGGYAFVAEGI 135 Query: 165 SLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + TG AF +KYRR +D++ V FGDGA+N GQ +E N+AALW L +IYV+EN Sbjct: 136 PVATGAAFQSKYRREMMGDETADQVTVCFFGDGASNNGQFFECLNMAALWKLPIIYVVEN 195 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G + +RA++Q K+ F++ G++VDGMD+ AV+ +A+A RA +GP +I Sbjct: 196 NKWAIGMAHNRATSQPEIYKKASVFDMVGVEVDGMDVLAVRKVAQEAIARARAGEGPTLI 255 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP R+ +E + + DPI+++ L+ + A++ +L EI+ V+ Sbjct: 256 EALTYRFRGHSLADPDELRSPDE-KQFWGSKDPIQRLEAYLIEHNLANQSELDEIKQKVQ 314 Query: 338 KIINNSVEFAQSDKEPDPAELY 359 ++++V+FA+ EPDP ELY Sbjct: 315 ASVDDAVKFAEESPEPDPKELY 336 >gi|282897260|ref|ZP_06305262.1| Dehydrogenase, E1 component [Raphidiopsis brookii D9] gi|281197912|gb|EFA72806.1| Dehydrogenase, E1 component [Raphidiopsis brookii D9] Length = 345 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 140/327 (42%), Positives = 211/327 (64%), Gaps = 10/327 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM-KMSLTEGDQ 104 + KE+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ + ++ G+ Sbjct: 16 QITKEEGLGLYEDMVLGRYFEDKCAEMYYRGKMFGFVHLYNGQEAVSSGIIRGAMRPGED 75 Query: 105 MITA-YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +++ YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS ++ GG+ V Sbjct: 76 FVSSTYRDHVHALSAGVPAREVMAELFGKATGCSKGRGGSMHMFSAEHRLLGGYAFVAEG 135 Query: 164 VSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + + +G AF +KYRR +D++ FGDGAAN GQ +E+ N+AALW L +++V+E Sbjct: 136 IPVASGAAFQSKYRREVLGDEKADQVTACFFGDGAANNGQFFETLNMAALWKLPILFVVE 195 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN++A+G + RA++ K+ FN+ G++VDGMD+ AV+ +AVA RA +GP + Sbjct: 196 NNKWAIGMAHERATSDPEIYKKASVFNMVGVEVDGMDVLAVRQVAQEAVARARAGEGPTL 255 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 IE LTYR+RGHS++DP R++EE E + DPI+++ L+ + A E DLK+IE + Sbjct: 256 IEALTYRFRGHSLADPDELRSKEE-KEFWFSRDPIKKLGAYLVEHNLAIESDLKQIEKKI 314 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 + +I ++V FAQ EPD +ELY I Sbjct: 315 QSLIEDAVSFAQESPEPDSSELYRFIF 341 >gi|301117248|ref|XP_002906352.1| pyruvate dehydrogenase E1 component subunit alpha [Phytophthora infestans T30-4] gi|262107701|gb|EEY65753.1| pyruvate dehydrogenase E1 component subunit alpha [Phytophthora infestans T30-4] Length = 402 Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 144/327 (44%), Positives = 203/327 (62%), Gaps = 7/327 (2%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E + N+E+ L Y LM +RR E Y + GFCHL GQEAV G++ +L Sbjct: 50 EFAVTNREEMLGYYELMYKMRRMEITNDNEYKARTIRGFCHLYDGQEAVATGVEAALDRK 109 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D IT+YR H +LA G + I+AEL G G + GKGGSMH + ++ FYGG GIVGA Sbjct: 110 DSWITSYRNHCIMLARGAEVKDILAELFGMSAGATGGKGGSMHFYKKESNFYGGQGIVGA 169 Query: 163 QVSLGTGIAFANKYRRSDKICVVC----FGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 QV +G G+AFA+KY + C FGDGAANQGQV+E+ N+AALW L VI+ IENN Sbjct: 170 QVPVGAGLAFASKYNHKGDGPMPCAITMFGDGAANQGQVFEAANMAALWKLPVIFCIENN 229 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 Y MGTS+ R++ T++ G IPG++ DG D+ AV+ +C GPI +E Sbjct: 230 HYGMGTSIQRSTNNTDYYTMGNK--IPGIKCDGNDVLAVRECTKFLKKWCGEGNGPIFVE 287 Query: 279 MLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 M TYRY GHSMSDP YR R+EI++MR++ DPIE V+KR++ ++A+ ++KE+E VR Sbjct: 288 MNTYRYHGHSMSDPGVTYRNRDEISQMRASRDPIELVKKRMIEAEFATADEIKELEKKVR 347 Query: 338 KIINNSVEFAQSDKEPDPAELYSDILI 364 + + + A++ +P + + D+ + Sbjct: 348 AEVVKATKEAKASGKPASSAAFEDVYM 374 >gi|225009969|ref|ZP_03700441.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Flavobacteria bacterium MS024-3C] gi|225005448|gb|EEG43398.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Flavobacteria bacterium MS024-3C] Length = 331 Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 142/317 (44%), Positives = 198/317 (62%), Gaps = 2/317 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEG 102 + + KE L Y ML R+FE+K +Y V GF HL GQEAV+ G ++ Sbjct: 1 MKKVTKEVYLKWYEDMLFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVLAGSLHAMDLSC 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H + GVD K+MAEL G+ G SKG GGSMH+FS ++ FYGGHGIVG Sbjct: 61 DKMITAYRNHVQPIGMGVDPKKVMAELFGKVTGTSKGMGGSMHIFSKEHRFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG G+AF++KY + + + + GDGA QG ++E+FN+A LW L V+++ ENN YAM Sbjct: 121 QIPLGAGLAFSDKYFKQNGVTLCYMGDGAVRQGSLHETFNLAMLWQLPVVFICENNGYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV+R S T+ K G+ + +P VDGMD V + KAV R+ GP +EM TY Sbjct: 181 GTSVARTSYSTDIWKLGLGYEMPCGPVDGMDPVKVAEEVSKAVERARSGGGPTFLEMKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YRT++E+ E + DPI QV + K+A++ +K I+ V+ ++ Sbjct: 241 RYRGHSMSDAQHYRTKDEVEEYKKI-DPITQVLDVIKKKKYATDAQVKAIDKRVKDLVKE 299 Query: 343 SVEFAQSDKEPDPAELY 359 +FA++ P +LY Sbjct: 300 CEDFAEASDYPPVQQLY 316 >gi|282899820|ref|ZP_06307782.1| Dehydrogenase, E1 component [Cylindrospermopsis raciborskii CS-505] gi|281195302|gb|EFA70237.1| Dehydrogenase, E1 component [Cylindrospermopsis raciborskii CS-505] Length = 345 Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 139/327 (42%), Positives = 211/327 (64%), Gaps = 10/327 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM-KMSLTEGDQ 104 + +E+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ + ++ G+ Sbjct: 16 QITREEGLGLYEDMVLGRYFEDKCAEMYYRGKMFGFVHLYNGQEAVSSGIIRGAMRPGED 75 Query: 105 MITA-YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +++ YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS ++ GG+ V Sbjct: 76 FVSSTYRDHVHALSAGVPAREVMAELFGKATGCSKGRGGSMHMFSAEHRLLGGYAFVAEG 135 Query: 164 VSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + + +G AF +KYRR +D++ FGDGAAN GQ +E+ N+AALW L +++V+E Sbjct: 136 IPVASGAAFQSKYRREVLGDQRADQVTACFFGDGAANNGQFFETLNMAALWKLPILFVVE 195 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN++A+G + RA++ K+ FN+ G++VDGMD+ AV+ +AVA RA +GP + Sbjct: 196 NNKWAIGMAHERATSDPEIYKKASVFNMVGVEVDGMDVLAVRQVAQEAVARARAGEGPTL 255 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 IE LTYR+RGHS++DP R++EE E + DPI+++ L+ + A E DLK+IE + Sbjct: 256 IEALTYRFRGHSLADPDELRSKEE-KEFWFSRDPIKKLGAYLVEHNLAVESDLKQIEKKI 314 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 + +I ++V FAQ EPD +ELY I Sbjct: 315 QSLIEDAVSFAQESPEPDSSELYRFIF 341 >gi|289615943|emb|CBI57294.1| unnamed protein product [Sordaria macrospora] Length = 330 Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 141/287 (49%), Positives = 195/287 (67%), Gaps = 5/287 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M+++R+ E A +LY + GFCHL +GQEAV VG++ ++ + D +IT+YR HG Sbjct: 2 YYDMVVVRQMEMAADRLYKEKKIRGFCHLSVGQEAVAVGIEHAIQKTDDVITSYRCHGFA 61 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 G I+ EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV++G G+AFA K Sbjct: 62 YMRGGTVRSIIGELLGRREGIAYGKGGSMHMFT--KGFYGGNGIVGAQVAVGAGLAFAQK 119 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y K ++ +GDGA+NQGQV+ESFN+A LWNL ++ ENN+Y MGTS +R+SA T + Sbjct: 120 YTGGKKASIILYGDGASNQGQVFESFNMAKLWNLPALFGCENNKYGMGTSAARSSALTEY 179 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-N 294 KRG IPG++V+GMD+ AVKA + + GP+++E +TYRY GHSMSDP Sbjct: 180 YKRGQY--IPGLKVNGMDVLAVKAAVAYGKEWTNNDNGPLVLEYVTYRYGGHSMSDPGTT 237 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRTREEI MRS +DPI +++ +L A+E +LK ++ R +N Sbjct: 238 YRTREEIQRMRSTNDPIAGLKQHILEWGVATEEELKGLDKEARAHVN 284 >gi|320590645|gb|EFX03088.1| pyruvate dehydrogenase e1 component alpha mitochondrial precursor [Grosmannia clavigera kw1407] Length = 420 Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 141/322 (43%), Positives = 208/322 (64%), Gaps = 7/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K+ Y M+++R+ E A +LY + GFCHL GQEAV VG++ ++T D + Sbjct: 83 EVTKKHLKRTYYDMVVVRQMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIENAITRDDDI 142 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YR HG G K++ EL GRQGGI+ G+GGSMHMF + GFYGG+GIVGAQV Sbjct: 143 ITSYRCHGFAYMRGAPVRKVLGELLGRQGGIAYGRGGSMHMF--EKGFYGGNGIVGAQVP 200 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+AFA+ Y K ++ +GDGA+NQGQV+E+FN+A LW L ++ ENN+Y MGT+ Sbjct: 201 VGAGLAFAHMYEGRKKATIILYGDGASNQGQVFEAFNMAKLWKLPALFGCENNKYGMGTA 260 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +R+SA T++ KRG IPG++V+GMD+ AV+ + + GP+++E +TYRY Sbjct: 261 ANRSSALTDYYKRGQY--IPGIKVNGMDVLAVQQAVKYGKEWTENGHGPLVLEYVTYRYG 318 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YRTREE+ MRS +DPI ++ +++ +E +LK ++ R +N Sbjct: 319 GHSMSDPGTTYRTREEVQRMRSTNDPIAGLKHKMVEWGVVTEDELKALDKEARSYVNEES 378 Query: 345 EFAQSDKEPDP--AELYSDILI 364 A++ + P+ L++DI + Sbjct: 379 AAAEAMELPEANLQVLFNDIYV 400 >gi|91079148|ref|XP_966627.1| PREDICTED: similar to L(b002) protein [Tribolium castaneum] gi|270003622|gb|EFA00070.1| hypothetical protein TcasGA2_TC002884 [Tribolium castaneum] Length = 384 Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 146/318 (45%), Positives = 198/318 (62%), Gaps = 6/318 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 K L+ Y M IR+ E +LY + GFCHL GQEAV VG++ ++ D ++ Sbjct: 46 LTKPDALTIYDQMQTIRKMETAISKLYTAKAIRGFCHLYAGQEAVAVGVQYNVRPNDIIV 105 Query: 107 TAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T+YR H L G +D + ++ EL G GG S+GKGGSMHM+ KN F GG GIVGA V Sbjct: 106 TSYRNHAWTLLNGNLDPAPVVCELMGTTGGCSRGKGGSMHMYG-KN-FIGGSGIVGAHVP 163 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AF KY+ D + + +GDGAAN GQV+E+FN+A +W L +++ ENN + MGTS Sbjct: 164 LGAGVAFTFKYKNEDGVAITVYGDGAANNGQVFEAFNMAKMWKLPCLFLCENNLFGMGTS 223 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R +A F RG IPG+ DGMD+ V+ + A +C + KGPIIIE TYRY Sbjct: 224 VDRHAANKEFYTRGDY--IPGVWTDGMDVLMVREAVKFAFNHCISGKGPIIIEAQTYRYF 281 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP +YRT EE+ EMRS DPI ++++L K +E +LKEIE +K ++++V Sbjct: 282 GHSMSDPGTSYRTHEEVKEMRSKRDPITNFKQKILDAKLVTEDELKEIENKRKKTVDDAV 341 Query: 345 EFAQSDKEPDPAELYSDI 362 + DKE EL +I Sbjct: 342 AKCKKDKEVGLEELTINI 359 >gi|260061854|ref|YP_003194934.1| pyruvate dehydrogenase E1 component subunit alpha [Robiginitalea biformata HTCC2501] gi|88785987|gb|EAR17156.1| Pyruvate dehydrogenase E1 component, alpha subunit [Robiginitalea biformata HTCC2501] Length = 365 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 143/320 (44%), Positives = 197/320 (61%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEG 102 + + KE L Y ML R+FE+K +Y V GF HL GQEAV+ G ++ E Sbjct: 34 MKKVTKEVYLKWYEDMLFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVLAGSLHAMDLEK 93 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H + GVD ++MAEL G+ G SKG GGSMH+FS ++ FYGGHGIVG Sbjct: 94 DRMITAYRNHVQPIGLGVDPKRVMAELYGKVTGTSKGMGGSMHIFSKEHRFYGGHGIVGG 153 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG G+AFA+KY D + + GDGA QG ++E+FN+A LW L V+++ ENN YAM Sbjct: 154 QIPLGAGLAFADKYFERDAVTLCYMGDGAVRQGSLHETFNLAMLWQLPVVFICENNGYAM 213 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV+R + T K G+ + +P VDGMD V + KAV R GP +EM TY Sbjct: 214 GTSVARTAHSTEIWKLGLGYEMPCGPVDGMDPVTVAEEVYKAVDRARTGGGPTFLEMKTY 273 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YRT+EE+ E + DPI QV + ++A++ ++ EI+ V++ + Sbjct: 274 RYRGHSMSDAQHYRTKEEVEEYKKI-DPITQVLDVIKDKRYATDEEISEIDKRVKQRVKE 332 Query: 343 SVEFAQSDKEPDPAELYSDI 362 +FA+ P +LY + Sbjct: 333 CEKFAEESDFPPVEQLYDTV 352 >gi|194758717|ref|XP_001961608.1| GF15055 [Drosophila ananassae] gi|190615305|gb|EDV30829.1| GF15055 [Drosophila ananassae] Length = 403 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 147/329 (44%), Positives = 206/329 (62%), Gaps = 7/329 (2%) Query: 36 IPFLEGFE-VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG 94 +P + G + + +K L YR M+ +R E A LY + GFCHL GQEA VG Sbjct: 52 LPQMTGPDLIVPLSKVDALRYYRQMVALRSLETAAANLYKERFIRGFCHLYSGQEACAVG 111 Query: 95 MKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 ++ ++ E D++I+ YR HG GV A ++AELTGR G S GKGGSMHM+ KN F+ Sbjct: 112 IRAAMGEQDKLISGYRIHGWAYMMGVSAQGVLAELTGRSTGCSGGKGGSMHMYG-KN-FF 169 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 GG GIVG QV LG G+AFA KY + + + +GDGAANQGQ+ E+FN+A LW L +++V Sbjct: 170 GGTGIVGDQVPLGAGLAFAGKYLKDGSVALALYGDGAANQGQIAETFNMAQLWQLPLVFV 229 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ENN Y MGTS R+S+ + KRG +PG++VDG D+ AVK+ A+ + R KGP Sbjct: 230 CENNNYGMGTSSKRSSSNDKYFKRGDL--LPGIRVDGQDVLAVKSATKFAIQHAR-DKGP 286 Query: 275 IIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 +I+E+ TYRY GHSMSDP +YRTREE+ +R+ DPI+ + + S+ +L E+ Sbjct: 287 LIVELETYRYGGHSMSDPGTSYRTREEVQRIRAERDPIKIFQTLCFQHALISQDELMELN 346 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDI 362 V+ I + + A D EP +L+SD+ Sbjct: 347 NQVKAEIKAATKAAILDGEPSLPDLWSDV 375 >gi|326427165|gb|EGD72735.1| pyruvate dehydrogenase E1 component alpha [Salpingoeca sp. ATCC 50818] Length = 380 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 140/298 (46%), Positives = 190/298 (63%), Gaps = 6/298 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +EF KE+ ++ M +IRR E AG+LY + GFCHL GQEAV VGM + D Sbjct: 46 TAEFTKEEAWKYFKDMSVIRRMETTAGELYRSKYIRGFCHLYSGQEAVCVGMMAGMKPED 105 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ITAYR HG G +I+AEL G G S+G GGSMH + K FYGG+GIVGAQ Sbjct: 106 SFITAYRCHGWAYCHGYSVKQILAELFGNSAGASQGLGGSMHFYGDK--FYGGNGIVGAQ 163 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V +G G+A A++Y + +C +GDGAANQGQV+E++N+A LWNL ++V ENN+Y MG Sbjct: 164 VPVGAGVALAHQYANDNGVCFTMYGDGAANQGQVFEAYNMAKLWNLPCVFVCENNKYGMG 223 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TS SRA+A ++ RG +PG+ VDGMDI AV+ A Y + GP+++E+ TYR Sbjct: 224 TSASRAAASVDYYTRGDY--VPGIWVDGMDIVAVREATKWASEYA-SKNGPLVMEVETYR 280 Query: 284 YRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 Y GHSMSDP YRTR++I ++R+ DPI R ++ +A+E +LK E +R + Sbjct: 281 YHGHSMSDPDTTYRTRDDIKKVRTTFDPILLFRNHMVEAGFATEDELKAAEKEIRASV 338 >gi|126654704|ref|ZP_01726238.1| Dehydrogenase, E1 component [Cyanothece sp. CCY0110] gi|126623439|gb|EAZ94143.1| Dehydrogenase, E1 component [Cyanothece sp. CCY0110] Length = 343 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 135/322 (41%), Positives = 209/322 (64%), Gaps = 9/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQ 104 + +KE+ L Y M L R FE+K ++Y G + GF HL GQEAV G+ +L + D Sbjct: 16 QLSKEEGLMLYEDMTLGRLFEDKCAEMYYRGRMFGFVHLYNGQEAVSTGIIKALRPDEDY 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + YR+H H L+CGV ++MAEL G+Q G SKG+GGSMH+FS ++ GG+ V + Sbjct: 76 VASTYRDHVHALSCGVPPREVMAELFGKQTGCSKGRGGSMHLFSEQHRLLGGYAFVAEGI 135 Query: 165 SLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + TG AF +KYRR +D++ FGDGA+N GQ +E N+AALW L +IYV+EN Sbjct: 136 PVATGAAFQSKYRREAMGDDSADQVTACFFGDGASNNGQFFECLNMAALWKLPIIYVVEN 195 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G + +RA++Q K+ F++ G++VDGMD+ AV+ +AVA RA +GP +I Sbjct: 196 NKWAIGMAHNRATSQPEIYKKASVFDMVGVEVDGMDVLAVRKVAQEAVARARAGEGPTLI 255 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP R+ +E + + DPI+++ L+ + ++ +L EI+ V+ Sbjct: 256 EALTYRFRGHSLADPDELRSPDE-KQFWGSKDPIQRLEAYLIEHNLVNQNELDEIKQQVQ 314 Query: 338 KIINNSVEFAQSDKEPDPAELY 359 ++++V+FA+ EPDP +LY Sbjct: 315 AKVDDAVKFAEESPEPDPKDLY 336 >gi|117927798|ref|YP_872349.1| pyruvate dehydrogenase (acetyl-transferring) [Acidothermus cellulolyticus 11B] gi|117648261|gb|ABK52363.1| Pyruvate dehydrogenase (acetyl-transferring) [Acidothermus cellulolyticus 11B] Length = 375 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 140/343 (40%), Positives = 211/343 (61%), Gaps = 7/343 (2%) Query: 22 SAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF 81 +A+RA ++ D+ +++ ++ + YR+M LIRRFEE+A ++Y +GG+ Sbjct: 13 TARRANPATAP--DLATTPADRLAQEPPDKLRAYYRMMQLIRRFEERAAEMYQRAKIGGY 70 Query: 82 CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKG 141 CHL +G+EA +VG+ ++ D + T YREHG+ LA G+D ++MAEL GR G+SKG G Sbjct: 71 CHLNLGEEATVVGLMDAMAPHDYLFTTYREHGYALARGIDPGRVMAELFGRTTGVSKGWG 130 Query: 142 GSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR---SDKICVVCF-GDGAANQGQV 197 GSMH+F + GG+GIVG Q+ TG A A YR+ D VVC GD N G Sbjct: 131 GSMHLFDAETRLLGGYGIVGGQIPPATGAALAIAYRQPPGPDTPAVVCLVGDATTNIGAW 190 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 +ES N+A +W+L ++YVI NNQ MGT V +ASA+ + KRG ++ IPG++VDG D+ A Sbjct: 191 HESLNLAGIWHLPIVYVIINNQLGMGTPVEKASAEPDLYKRGCAYRIPGVRVDGNDVIAC 250 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 + + A+ R + P I+E ++YR RGHS+ DPA YR++EE + + HDP+ R+R Sbjct: 251 REALRDALRKAREERAPSILEAVSYRLRGHSVVDPARYRSKEEAQRLLA-HDPVTAFRQR 309 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 L+ S + I+ V ++ +VEFA + P PAEL++ Sbjct: 310 LIDVGVLSADEAARIDAEVEAAVDAAVEFADNSPHPSPAELFA 352 >gi|67924717|ref|ZP_00518122.1| Pyruvate dehydrogenase (lipoamide) [Crocosphaera watsonii WH 8501] gi|67853433|gb|EAM48787.1| Pyruvate dehydrogenase (lipoamide) [Crocosphaera watsonii WH 8501] Length = 343 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 135/326 (41%), Positives = 208/326 (63%), Gaps = 9/326 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K + L Y M L R FE+K ++Y G + GF HL GQEAV G+ +L G+ Sbjct: 16 QLTKAEGLMLYEDMTLGRLFEDKCAEMYYRGRMFGFVHLYNGQEAVSTGIIKALRPGEDY 75 Query: 106 ITA-YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +++ YR+H H L+CGV ++MAEL G++ G SKG+GGSMH+FS K+ GG+ V + Sbjct: 76 VSSTYRDHVHALSCGVPPREVMAELFGKETGCSKGRGGSMHLFSEKHRLLGGYAFVAEGI 135 Query: 165 SLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + TG AF +KYRR +D++ FGDGA+N GQ +E N+A+LW L +IYV+EN Sbjct: 136 PVATGAAFQSKYRREMMGDDSADQVTACFFGDGASNNGQFFECLNMASLWKLPIIYVVEN 195 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G + RA+++ K+ F++ G++VDGMD+ AV+ +AV RA +GP +I Sbjct: 196 NKWAIGMAHDRATSEPEIYKKASVFDMVGVEVDGMDVLAVRKVAQEAVDRARAGEGPTLI 255 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP R+ +E + N DPI+++ L+ + A++ +L EI+ V+ Sbjct: 256 EALTYRFRGHSLADPDELRSPDE-KQFWGNKDPIQRLEAYLIEHNLANQSELDEIKQKVQ 314 Query: 338 KIINNSVEFAQSDKEPDPAELYSDIL 363 ++++V+FA+ EPDP ELY I Sbjct: 315 ASVDDAVKFAEESPEPDPKELYRYIF 340 >gi|268316956|ref|YP_003290675.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhodothermus marinus DSM 4252] gi|262334490|gb|ACY48287.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhodothermus marinus DSM 4252] Length = 380 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 155/319 (48%), Positives = 213/319 (66%), Gaps = 3/319 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 ++E L+ YR MLL RRFEE+A Q+YG + GF HL IG+EAV G S+ G D + Sbjct: 56 LSREDLLAIYRNMLLQRRFEERAAQMYGKQKIAGFLHLYIGEEAVSTGAAWSIKVGHDSV 115 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+HG LA G+ A++ MAEL G+ G S+GKGGSMH F + F+GGHGIVG V Sbjct: 116 ITAYRDHGIALALGMTANECMAELFGKIDGCSRGKGGSMHFFKAEKKFFGGHGIVGGHVP 175 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA+KY+ +C+ FGDGA QG V+E+ N+AAL+ L +I++IENNQYAMGT+ Sbjct: 176 LGVGIAFAHKYKEDGGVCLTFFGDGAMGQGTVHEAMNLAALYKLPIIFIIENNQYAMGTA 235 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V RA A T F + S+N+PG VDGMD+ +V + K VA R ++ P ++E+ TYRYR Sbjct: 236 VWRAFANTEFYRYAASYNMPGALVDGMDVFSVMKALRKYVALAREYQ-PSVLEVRTYRYR 294 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YRT+EE+ + DPI +++ +L + ++ +L I+ V+K + SVE Sbjct: 295 GHSMSDPAKYRTKEELEAKKKE-DPIIRLKSYMLQHGLSTNEELDAIDDEVKKEVQASVE 353 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ P +Y D+ + Sbjct: 354 FAEKSPFPPLESIYEDVYV 372 >gi|195435263|ref|XP_002065621.1| GK15549 [Drosophila willistoni] gi|194161706|gb|EDW76607.1| GK15549 [Drosophila willistoni] Length = 430 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 146/317 (46%), Positives = 195/317 (61%), Gaps = 6/317 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KE YR M+ IRR E A LY +V GFCHL GQEA VG+K ++ D +I Sbjct: 92 LGKEDAKVYYRQMVAIRRLEAAASLLYKERLVRGFCHLYTGQEACAVGIKAAMRPEDTLI 151 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR HG GV A ++AELTGR G +KGKGGSMHM+ GFYGG GIVG QV L Sbjct: 152 AGYRVHGWAYLMGVSALGVLAELTGRLSGCAKGKGGSMHMYG--QGFYGGTGIVGDQVPL 209 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIA A KY + +C +GDGAANQGQ++E FN+A LW L +++V ENN Y MGTS Sbjct: 210 GAGIALAKKYSNNGGVCFALYGDGAANQGQIFECFNMACLWKLPIVFVCENNNYGMGTSA 269 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+ + RG +PG+ V+G DI AV++ + A+ + + +GP+++E+ T+RY G Sbjct: 270 ERAACNIKYYTRGDV--LPGIWVNGQDILAVRSAAEFAIDHAQK-RGPLLLELSTHRYYG 326 Query: 287 HSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP YR REEI +R +DPI R N S+ +LK+I+ VR +N ++ Sbjct: 327 HSMSDPGTGYRPREEIQNVRIKYDPINSFRLLCQGNVILSQNELKQIDDEVRHEVNEAIG 386 Query: 346 FAQSDKEPDPAELYSDI 362 A+ D+E L+SD+ Sbjct: 387 RAKKDEELPINHLWSDV 403 >gi|256370810|ref|YP_003108635.1| pyruvate dehydrogenase E1 component subunit alpha [Candidatus Sulcia muelleri SMDSEM] gi|256009602|gb|ACU52962.1| pyruvate dehydrogenase E1 component, alpha subunit [Candidatus Sulcia muelleri SMDSEM] Length = 333 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 142/309 (45%), Positives = 194/309 (62%), Gaps = 2/309 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMITAYRE 111 L ++ M R+FE+K LY + GF HL GQEA+ G+ ++ + D+MITAYR Sbjct: 10 LKWFKDMSFWRKFEDKCRSLYLKQKIRGFLHLYNGQEAIPAGLVQAMDLKKDKMITAYRC 69 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 H +A GV+ KIMAEL G+ G S G GGSMH+FS K FYGGHGIVG Q+ +G GIA Sbjct: 70 HILPIAMGVNPKKIMAELFGKNTGTSCGMGGSMHIFSKKYRFYGGHGIVGGQIPIGAGIA 129 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 FA+KY D + + GDGA NQG ++E+FN+A +W L V+++ ENN+YAMGTSV R+S Sbjct: 130 FADKYFFRDAVTLTLMGDGAVNQGSLHETFNMAMIWKLPVVFICENNRYAMGTSVKRSSN 189 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 K G+++ +P VDGMD + A+ R KGP +++ TYRYRGHSMSD Sbjct: 190 IEEIYKIGLAYKMPSFCVDGMDPIKIYEHASNAIEKARKGKGPTFLDLRTYRYRGHSMSD 249 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 +YR+++EINE +S DPI ++K +L NK SE L E + + K I V FA+ Sbjct: 250 SESYRSKKEINEFKS-RDPILLIKKYILDNKLVSEKILNEFKDEINKKIEECVNFAEMSN 308 Query: 352 EPDPAELYS 360 P+ +LYS Sbjct: 309 SPNEEKLYS 317 >gi|323453484|gb|EGB09355.1| hypothetical protein AURANDRAFT_53060 [Aureococcus anophagefferens] Length = 390 Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 146/327 (44%), Positives = 209/327 (63%), Gaps = 8/327 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V+E +KE+ L ++ M +RR E Y + GFCHL GQEA+ G+ +L D Sbjct: 43 VAETSKEELLEYFKTMYTMRRMEITCDNEYKARTIRGFCHLYDGQEAIGTGINAALDLED 102 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 IT+YR H +LA G ++AEL G G + GKGGSMH ++ + FYGG GIVGAQ Sbjct: 103 SWITSYRCHCIMLARGGTVEGVLAELMGNAHGETGGKGGSMHFYNKEQNFYGGQGIVGAQ 162 Query: 164 VSLGTGIAFANKYR----RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V +GTG+AFANKY+ + + C+GDGAANQGQ++E+ N+AALW L +I+ IENNQ Sbjct: 163 VPVGTGLAFANKYKTPLGEKMPVAIGCYGDGAANQGQIWEAANMAALWKLPMIFCIENNQ 222 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 Y MGTS+SR+S+ ++ G IPG+++DGM++ +V+ M Y + GP+ +EM Sbjct: 223 YGMGTSISRSSSNNDYYTMGNL--IPGIKMDGMNVLSVREGMKHVKDYVGSGNGPMYVEM 280 Query: 280 LTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYRY GHSMSDP YR R+EI MRS DPIE V+K L+ + A+E +LK +E +RK Sbjct: 281 STYRYHGHSMSDPGTTYRNRDEIAAMRSTRDPIEHVKKMLVDHTDATEEELKAMEKVIRK 340 Query: 339 IINNSVEFAQSDKEPDP-AELYSDILI 364 + ++ + A++ PD A+L ++I + Sbjct: 341 EVADACDRAKAGAPPDSIADLTNNIYL 367 >gi|309359872|emb|CAP32270.2| hypothetical protein CBG_13339 [Caenorhabditis briggsae AF16] Length = 300 Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 138/269 (51%), Positives = 185/269 (68%), Gaps = 5/269 (1%) Query: 95 MKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 MK ++TEGD +ITAYR HG G ++++AELTGR G GKGGSMHM+ TKN FY Sbjct: 1 MKAAMTEGDAVITAYRCHGWTWLLGATVTEVLAELTGRIAGNVHGKGGSMHMY-TKN-FY 58 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 GG+GIVGAQ LG G+A A KYR +CV +GDGAANQGQ++E+ N+A LW+L V++V Sbjct: 59 GGNGIVGAQQPLGAGVALAMKYREQKNVCVTLYGDGAANQGQLFEATNMAKLWDLPVLFV 118 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ENN + MGT+V R+SA T + RG +PG+ VDGMDI AV+ A YC + KGP Sbjct: 119 CENNGFGMGTAVERSSASTEYYTRGDY--VPGIWVDGMDILAVREATKWAKEYCDSGKGP 176 Query: 275 IIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 +++EM TYRY GHSMSDP +YRTR+EI E+R DPI + R++ + A+E +LK I+ Sbjct: 177 LMMEMATYRYHGHSMSDPGTSYRTRDEIQEVRKTRDPITGFKDRIITSSLATEEELKAID 236 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDI 362 VRK ++ +++ A SD P L++DI Sbjct: 237 KEVRKEVDEALKIATSDGVLPPEALFTDI 265 >gi|326523727|dbj|BAJ93034.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 407 Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 147/331 (44%), Positives = 206/331 (62%), Gaps = 13/331 (3%) Query: 35 DIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG 94 D P LE VS K++ + Y M L+RR E+ LY M+ GFCHL IGQEAV VG Sbjct: 66 DPPSLE---VST-TKDKMIELYSQMTLMRRMEQACDALYKAKMIRGFCHLAIGQEAVAVG 121 Query: 95 MKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 M+ ++ D++IT+YR H + G ++AEL GR+ G+SKGKGGSMH+F+ F+ Sbjct: 122 MESAINGDDRVITSYRCHPFAVLRGGTVKGVIAELLGREDGMSKGKGGSMHIFTPS--FF 179 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 GG+GIVGAQV +G GIAFA KY + + +GDGA+NQGQV+E++N+A LWNL ++V Sbjct: 180 GGNGIVGAQVPVGAGIAFAQKYLGNKTVTFAMYGDGASNQGQVFEAYNMAKLWNLPCVFV 239 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ENN+Y MGTS R+S T+F RG IPG+Q +GMD+ +V A + + KGP Sbjct: 240 CENNKYGMGTSAERSSQNTSFFTRGD--QIPGIQANGMDVLSVHQACKFAKEWTTSGKGP 297 Query: 275 IIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWA--SEGDLKE 331 +++E +TYRY GHSMSDP YRTR+EI MRS D I ++ L N W ++ + K Sbjct: 298 LVLEFVTYRYGGHSMSDPGTTYRTRDEIQRMRSTQDAINGIKIYL--NNWGILNDKETKN 355 Query: 332 IEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 I+ + + +V A+ K P + + D+ Sbjct: 356 IDKAAKAEVEQAVTEAKESKPPGLEKFWEDV 386 >gi|312371987|gb|EFR20040.1| hypothetical protein AND_20713 [Anopheles darlingi] Length = 462 Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 146/347 (42%), Positives = 208/347 (59%), Gaps = 37/347 (10%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +++ L YR M IRR E AG LY +V GFCHL GQEA VGMK ++ D +I+ Sbjct: 92 TRDEALQYYRQMQTIRRLETSAGNLYKEKLVRGFCHLYSGQEACAVGMKAAMRTQDNIIS 151 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV--- 164 AYR HG G+ S +++ELTG+ GG ++GKGGSMHM++ KN FYGG+GIVGAQV Sbjct: 152 AYRVHGWTYLMGITPSGVLSELTGKSGGCARGKGGSMHMYA-KN-FYGGNGIVGAQVRFF 209 Query: 165 ----------------------------SLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 LG G+A A KY+ + +C+ +GDGA+NQGQ Sbjct: 210 SARVLVHSRVSLVIVLPYFCDYFAALQVPLGAGVALACKYKNNGGVCLALYGDGASNQGQ 269 Query: 197 VYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA 256 ++E++N+A LW L I+V ENN Y MGTS R S NF RG +PG+ VDGMD+ A Sbjct: 270 IFEAYNMAHLWKLPCIFVCENNGYGMGTSADRGSCNVNFYSRGDV--LPGIWVDGMDVVA 327 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVR 315 VK + A+ + + GP+++E+ TYRY GHSMSDP +YRTREE+ E+R DPI + Sbjct: 328 VKLATEFAINHV-LNIGPVVMEVYTYRYSGHSMSDPGTSYRTREEVQEVRQTRDPITSFK 386 Query: 316 KRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +++ +LK ++ ++K I+++ + A++D E EL +D+ Sbjct: 387 DKIIDAGLVKAEELKTMDNEIKKEIDDATKQAKADSEIGLPELSTDV 433 >gi|219127645|ref|XP_002184042.1| precursor of dehydrogenase pyruvate dehydrogenase E1 component alpha subunit [Phaeodactylum tricornutum CCAP 1055/1] gi|217404765|gb|EEC44711.1| precursor of dehydrogenase pyruvate dehydrogenase E1 component alpha subunit [Phaeodactylum tricornutum CCAP 1055/1] Length = 413 Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 143/320 (44%), Positives = 197/320 (61%), Gaps = 7/320 (2%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K++ + + LM +RR E Y + GFCHL GQEAV G+ + D IT+ Sbjct: 64 KQELVDIFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGILNAFEPEDSWITS 123 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR H LA G +++ EL G G+S+GKGGSMH ++ K+ F+GG GIVGAQV +G Sbjct: 124 YRCHCIALARGGSVRQVVGELFGVIDGMSRGKGGSMHFYNKKHNFFGGQGIVGAQVPVGA 183 Query: 169 GIAFANKYRRSD----KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G+AFANKY + + C+GDGAANQGQ++ES N++ALW L +I+ IENN Y MGT Sbjct: 184 GLAFANKYNAKPGEKMNVAIACYGDGAANQGQIWESANMSALWKLPMIFCIENNHYGMGT 243 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S+ R S+ +++ K G S IPG+++DGM++ AV+ M A +C + GP+ +EM+TYRY Sbjct: 244 SIDRHSSISDYYKMGNS--IPGLRIDGMNVLAVREGMRFAKEFCGSGNGPMYVEMMTYRY 301 Query: 285 RGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHSMSDP YR REEI RS DP+E V+K LL N++ E ++K E +RK + Sbjct: 302 HGHSMSDPGTTYRNREEIAFTRSTRDPLEFVKKCLLDNEFIDEAEIKSTEKRIRKSVQEE 361 Query: 344 VEFAQSDKEPDPAELYSDIL 363 V A+ P EL I Sbjct: 362 VMKAKESTSPPLDELTKHIF 381 >gi|56752159|ref|YP_172860.1| pyruvate dehydrogenase E1 component subunit alpha [Synechococcus elongatus PCC 6301] gi|81300753|ref|YP_400961.1| pyruvate dehydrogenase (lipoamide) [Synechococcus elongatus PCC 7942] gi|56687118|dbj|BAD80340.1| pyruvate dehydrogenase E1 component alpha subunit [Synechococcus elongatus PCC 6301] gi|81169634|gb|ABB57974.1| Pyruvate dehydrogenase (lipoamide) [Synechococcus elongatus PCC 7942] Length = 342 Score = 275 bits (702), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 136/329 (41%), Positives = 203/329 (61%), Gaps = 10/329 (3%) Query: 39 LEGFEVSE--FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 L F+ S+ ++E+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ Sbjct: 7 LPSFQASQAQVSREEGLRIYEDMVLGRTFEDKCAEMYYRGKMFGFVHLYNGQEAVASGII 66 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 ++ D + + YR+H H L+ GV A ++MAEL G++ G S+G+GGSMH+FS ++ GG Sbjct: 67 KAMRSDDYVCSTYRDHVHALSAGVPARQVMAELFGKETGCSRGRGGSMHLFSAEHNLLGG 126 Query: 157 HGIVGAQVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 V + + TG AF YRR +D++ FGDGAAN GQ +E N+A LW L Sbjct: 127 FAFVAEGIPVATGAAFTTAYRRNALGDTSADQVTACFFGDGAANNGQFFECLNMATLWKL 186 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 +++V+ENN++A+G S RA++ K+G +F +PG++VDGMD+ AV+A +A+A R Sbjct: 187 PILFVVENNKWAIGMSHERATSDPEIYKKGPAFGMPGVEVDGMDVLAVRAVAQEAIARAR 246 Query: 270 AHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 A +GP +IE LTYR+RGHS++DP R++EE E DPI++ L A+ +L Sbjct: 247 AGEGPTLIEALTYRFRGHSLADPDELRSKEE-KEFWLARDPIKRFAAHLTEFNLATHEEL 305 Query: 330 KEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 K I+ + ++ +VEFA S EP P EL Sbjct: 306 KAIDKKIEALVAEAVEFAISSPEPKPEEL 334 >gi|254422126|ref|ZP_05035844.1| pyruvate dehydrogenase E1 component, alpha subunit [Synechococcus sp. PCC 7335] gi|196189615|gb|EDX84579.1| pyruvate dehydrogenase E1 component, alpha subunit [Synechococcus sp. PCC 7335] Length = 342 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 135/327 (41%), Positives = 195/327 (59%), Gaps = 8/327 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +EQ L Y MLL R FE+K +LY G V GF HL GQEAV G+ + D Sbjct: 14 TPQITREQGLLVYEDMLLGRYFEDKCAELYQRGKVKGFVHLYNGQEAVASGVIKVMRSDD 73 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + YR+H H L+ GV A ++MAEL G++ G SKG+GGSMHMFS ++ GG +G Sbjct: 74 YVCSTYRDHVHSLSAGVPAREVMAELFGKETGCSKGRGGSMHMFSKEHNVLGGFAFIGEG 133 Query: 164 VSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + + G AF ++YR+ +D++ FGDG N GQ +E N+AALW L +I+V+E Sbjct: 134 IPVALGAAFQSRYRKEAMGDASADQVTAAFFGDGTTNNGQFFECLNMAALWKLPIIFVVE 193 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN++A+G + RAS+QT K+ F +PG +VDGMD+ AV+A A+ RA +GP + Sbjct: 194 NNKWAIGMAHERASSQTEIYKKASVFGMPGYEVDGMDVLAVRAAAKTAIDRARAGEGPTL 253 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +E LTYRYRGHS++DP R +E R + DPI++ LL SE +LK + + Sbjct: 254 LECLTYRYRGHSVADPDELRDPDEKKFWR-DRDPIKRFEAYLLEQSLVSEAELKAVRDKI 312 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 ++ +S+ FA+ P P +LY I Sbjct: 313 TDVVEDSLTFAEESPNPSPDDLYKYIF 339 >gi|325181574|emb|CCA16024.1| pyruvate dehydrogenase E1 component subunit alpha p [Albugo laibachii Nc14] Length = 415 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 152/356 (42%), Positives = 206/356 (57%), Gaps = 21/356 (5%) Query: 25 RAATSSVDCVDIPFLEGFEVSEF----------NKEQELSAYRLMLLIRRFEEKAGQLYG 74 R A S+ + FL F++ +KE+ L YRLM +RR E Y Sbjct: 36 RRAFSTSEKQQFEFLRPFKLHRLEKGPENHAYSSKEELLEYYRLMYTMRRMEITCDNEYK 95 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 + GFCHL GQEAV G++ +L D IT+YR H +LA G I+ EL G Sbjct: 96 ARTIRGFCHLYDGQEAVATGVEAALDRKDAWITSYRNHCTMLARGGTVKSILGELFGTSA 155 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC----FGDG 190 G KGKGGSMH +S K FYGG GIVGAQV +G G+ FA KY + + + C +GDG Sbjct: 156 GAIKGKGGSMHFYSKKENFYGGQGIVGAQVPVGAGLGFACKYNHNGEGLMPCAITMYGDG 215 Query: 191 AANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD 250 AANQGQ++E+ N+A+LW L VI+ IENNQY MGTS++R+S+ ++ G +IPG+ D Sbjct: 216 AANQGQIWEAANMASLWKLPVIFCIENNQYGMGTSIARSSSNKDYYTMGN--HIPGIWCD 273 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHD 309 GMD+ AV+ +C GPI +E TYRY GHSMSDP YR R+EI++MR+ D Sbjct: 274 GMDVLAVRECARFMKQWCGEGNGPIYVEFCTYRYHGHSMSDPGVTYRNRDEISQMRAARD 333 Query: 310 PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA----ELYSD 361 PIE V+KRLL + ++K IE +VR + + + A++ P +YSD Sbjct: 334 PIESVKKRLLDYNMVTADEIKAIEKDVRAEVVKAAKEAKTADRPQEGIAFESVYSD 389 >gi|253700589|ref|YP_003021778.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacter sp. M21] gi|251775439|gb|ACT18020.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacter sp. M21] Length = 325 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 131/316 (41%), Positives = 190/316 (60%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 +E+ L Y M+L R FEE + Y G + GF HL GQEAV VG L D +++A Sbjct: 11 EEELLKFYEQMVLCREFEESCAEQYSKGHITGFLHLYSGQEAVAVGCSAGLQPADYILSA 70 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+H + G D ++MAEL G+ G+ KGKGGSMH+F+ + F GG+ IVG Q + T Sbjct: 71 YRDHAQAIVRGADPKRVMAELFGKATGLCKGKGGSMHLFAPELNFMGGYAIVGGQFPIAT 130 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A+ ++ + D+I FGDG+ NQG +ES N A LW+L V+++ ENN Y +GT V R Sbjct: 131 GLAWGSQLQEQDRITACFFGDGSMNQGTFHESLNWARLWDLPVLFICENNFYGIGTEVHR 190 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASAQ +R ++IP +VDGMD+ A+ +A + R + P IE +TYR+RGHS Sbjct: 191 ASAQAALHRRTCGYDIPSEKVDGMDVVAMYQATKRAAEWVRERQRPYFIEAVTYRFRGHS 250 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YR+ E E+ + DPI + +RLL A + L EI+ + +V FA+ Sbjct: 251 MSDPAKYRSSSEA-EVWKSRDPIPNLSRRLLEEGIADQARLDEIDRRALAQVQEAVRFAE 309 Query: 349 SDKEPDPAELYSDILI 364 P+ +E+++DI + Sbjct: 310 DSPWPEDSEIWNDIYV 325 >gi|220906420|ref|YP_002481731.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Cyanothece sp. PCC 7425] gi|219863031|gb|ACL43370.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cyanothece sp. PCC 7425] Length = 342 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 130/324 (40%), Positives = 205/324 (63%), Gaps = 8/324 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++E+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ ++ + D + + Sbjct: 18 SREEGLVLYEDMVLGRYFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGIIKAMRKDDYVCS 77 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A ++MAEL G+ G SKG+GGSMH+FS ++ GG V + + Sbjct: 78 TYRDHVHALSVGVPAKEVMAELFGKATGCSKGRGGSMHLFSAEHHLLGGFAFVAEGIPIA 137 Query: 168 TGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 TG AF KYRR +D++ FGDGA+N GQ +E N+AALW L +++++ENN++ Sbjct: 138 TGAAFQTKYRREAMADPTADQVTACFFGDGASNNGQFFECLNMAALWKLPILFIVENNKW 197 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+G + RA+++ K+ FN+ G++VDGMD+ AV++ +A+ RA +GP +IE L Sbjct: 198 AIGMAHERATSEVEIYKKAEVFNMHGVEVDGMDVMAVRSVAQEAIRRARAGEGPTLIEAL 257 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYR+RGHS++DP R++ E E DPI++ L+ A + +LK I+ ++ +I Sbjct: 258 TYRFRGHSLADPDELRSKSE-KETWLARDPIKKFAAYLVEQNLAQDKELKAIDKKIQAVI 316 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 ++V+FA++ EPDP ELY + + Sbjct: 317 EDAVKFAETSPEPDPKELYRYVFV 340 >gi|322419488|ref|YP_004198711.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Geobacter sp. M18] gi|320125875|gb|ADW13435.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacter sp. M18] Length = 325 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 133/318 (41%), Positives = 190/318 (59%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++E+ L Y M+L R FEE + Y G + GF HL GQEAV VG L D ++ Sbjct: 9 LSEEELLRFYEQMVLCREFEESCAEQYSKGHITGFLHLYTGQEAVAVGCTAGLLPKDYVL 68 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +AYR+H + G D +K+MAEL G+ G+ KGKGGSMH+F+ + F GG+ IVG Q + Sbjct: 69 SAYRDHAQAIVRGADPNKVMAELFGKATGLCKGKGGSMHLFAPELNFMGGYAIVGGQFPI 128 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 TG+A+A++ D++ FGDGA NQG +ES N A LW L V+++ ENN Y +GT V Sbjct: 129 ATGLAWASQLLEEDRVTACFFGDGAMNQGTFHESLNWARLWELPVLFICENNFYGIGTEV 188 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASAQ +R ++ P +VDGMD+ A+ +A + R + P IE +TYR+RG Sbjct: 189 HRASAQAALHRRTCGYDTPSEKVDGMDVIAMFQATKRAAEWVRERQRPYFIEAVTYRFRG 248 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR+ E RS DPI + +RLL A++ L+EI+ + ++V F Sbjct: 249 HSMSDPAKYRSSSETEVWRSR-DPIPNLSRRLLEQGIATKEQLEEIDKRCLARVEDAVRF 307 Query: 347 AQSDKEPDPAELYSDILI 364 A P+ +E++ DI + Sbjct: 308 ASESPWPEDSEVWEDIYV 325 >gi|197118638|ref|YP_002139065.1| pyruvate dehydrogenase complex, E1 protein subunit alpha [Geobacter bemidjiensis Bem] gi|197087998|gb|ACH39269.1| pyruvate dehydrogenase complex, E1 protein, alpha subunit [Geobacter bemidjiensis Bem] Length = 325 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 132/316 (41%), Positives = 188/316 (59%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 +E L Y M+L R FEE + Y G + GF HL GQEAV VG L D +++A Sbjct: 11 EEDLLKFYEQMVLCREFEESCAEQYSKGHITGFLHLYSGQEAVAVGCTAGLQPADYVLSA 70 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+H + G D ++MAEL G+ G+ KGKGGSMH+F+ + F GG+ IVG Q + Sbjct: 71 YRDHAQAIVRGADPKRVMAELFGKATGLCKGKGGSMHLFAPELNFMGGYAIVGGQFPIAI 130 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A+ ++ + D+I FGDG+ NQG +ES N A LW+L V+++ ENN Y +GT V R Sbjct: 131 GLAWGSQLQEQDRITACFFGDGSMNQGTFHESLNWARLWDLPVLFICENNFYGIGTEVHR 190 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASAQ +R ++IP +VDGMD+ A+ +A + R H+ P IE +TYR+RGHS Sbjct: 191 ASAQAALHRRTCGYDIPSEKVDGMDVVAMYQATKRAAEWVREHQRPYFIEAVTYRFRGHS 250 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YR+ E E+ + DPI + +RL A + L EI N + +V FA+ Sbjct: 251 MSDPAKYRSSSEA-EVWKSRDPIPNLSRRLQEEGIADQARLDEINRNALAQVQEAVRFAE 309 Query: 349 SDKEPDPAELYSDILI 364 P+ +E++SDI + Sbjct: 310 DSPWPEDSEIWSDIYV 325 >gi|313235569|emb|CBY11024.1| unnamed protein product [Oikopleura dioica] Length = 360 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 142/305 (46%), Positives = 196/305 (64%), Gaps = 6/305 (1%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E+ + Y M IRR E KA QLY ++ GFCHL GQEA VGM+ ++ D +IT+Y Sbjct: 47 EEAVKYYTQMQTIRRMELKADQLYKQKVIRGFCHLYDGQEACCVGMENAIEVTDDVITSY 106 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R HG G+ +++AEL GR G S+G+GGSMHM++ + F+GG+GIVGAQV LG G Sbjct: 107 RAHGWTYVRGIPVKEVLAELFGRDLGCSRGRGGSMHMYA--DNFFGGNGIVGAQVPLGAG 164 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +A+ KY +++ I + +GDGAA+QGQ++E++N++ LW L I+V ENNQY MGTSV R Sbjct: 165 LAWNQKYTKNNGISISIYGDGAASQGQIFEAYNLSKLWKLPAIFVCENNQYGMGTSVDRH 224 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 SA T F KR + IPG+ VDGMD+ AV+ A + + GP++IE+ TYRY GHSM Sbjct: 225 SASTEFYKR--AGYIPGILVDGMDVVAVREATKWAKEFVLKN-GPLLIELKTYRYHGHSM 281 Query: 290 SDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 SDP +YR+R+E+ M+ DPI RKR + + +K I+ V+KII A Sbjct: 282 SDPGTSYRSRDEVQAMKKTGDPITGFRKRCIDAGLMTADQVKSIDKEVKKIIEAETGEAL 341 Query: 349 SDKEP 353 S EP Sbjct: 342 SSPEP 346 >gi|325181573|emb|CCA16023.1| pyruvate dehydrogenase E1 component subunit alpha p [Albugo laibachii Nc14] Length = 412 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 152/356 (42%), Positives = 206/356 (57%), Gaps = 21/356 (5%) Query: 25 RAATSSVDCVDIPFLEGFEVSEF----------NKEQELSAYRLMLLIRRFEEKAGQLYG 74 R A S+ + FL F++ +KE+ L YRLM +RR E Y Sbjct: 33 RRAFSTSEKQQFEFLRPFKLHRLEKGPENHAYSSKEELLEYYRLMYTMRRMEITCDNEYK 92 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 + GFCHL GQEAV G++ +L D IT+YR H +LA G I+ EL G Sbjct: 93 ARTIRGFCHLYDGQEAVATGVEAALDRKDAWITSYRNHCTMLARGGTVKSILGELFGTSA 152 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC----FGDG 190 G KGKGGSMH +S K FYGG GIVGAQV +G G+ FA KY + + + C +GDG Sbjct: 153 GAIKGKGGSMHFYSKKENFYGGQGIVGAQVPVGAGLGFACKYNHNGEGLMPCAITMYGDG 212 Query: 191 AANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD 250 AANQGQ++E+ N+A+LW L VI+ IENNQY MGTS++R+S+ ++ G +IPG+ D Sbjct: 213 AANQGQIWEAANMASLWKLPVIFCIENNQYGMGTSIARSSSNKDYYTMGN--HIPGIWCD 270 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHD 309 GMD+ AV+ +C GPI +E TYRY GHSMSDP YR R+EI++MR+ D Sbjct: 271 GMDVLAVRECARFMKQWCGEGNGPIYVEFCTYRYHGHSMSDPGVTYRNRDEISQMRAARD 330 Query: 310 PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA----ELYSD 361 PIE V+KRLL + ++K IE +VR + + + A++ P +YSD Sbjct: 331 PIESVKKRLLDYNMVTADEIKAIEKDVRAEVVKAAKEAKTADRPQEGIAFESVYSD 386 >gi|303287226|ref|XP_003062902.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455538|gb|EEH52841.1| predicted protein [Micromonas pusilla CCMP1545] Length = 386 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 149/352 (42%), Positives = 212/352 (60%), Gaps = 31/352 (8%) Query: 34 VDIPFL-----EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 V IPF+ + E +K + + + L+RR E A LY + GFCHL GQ Sbjct: 5 VPIPFVAHRIDPPSQTVETSKAEIVDMFTQSYLMRRLEIAADVLYKGKFIRGFCHLYDGQ 64 Query: 89 ------------EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGI 136 EAV VGM+ +L + D ++T+YR+H L G ++MAEL GR G Sbjct: 65 ARSISHWSPYDREAVCVGMEAALNKDDAIVTSYRDHCTHLGRGGTPLEVMAELMGRIDGA 124 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVS----------LGTGIAFANKYRRSDKICVVC 186 SKG GGSMHM+ F+GG+GIVGAQ S +G G+AFA +Y + + V Sbjct: 125 SKGMGGSMHMYKRDAHFFGGNGIVGAQASSDWSPYDRTPIGAGLAFAMQYEKKPNVAVAM 184 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPG 246 +GDGAANQGQ++E+ NIAALW+L +IYV ENN Y MGT++++++ + KRG +PG Sbjct: 185 YGDGAANQGQLFEALNIAALWDLPLIYVCENNHYGMGTAIAKSAKSPEYFKRGDY--VPG 242 Query: 247 MQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMR 305 ++VDGMD AVK + A +C + KGPI++EM TYRY GHSMSDP + YRTR+EI +R Sbjct: 243 LKVDGMDALAVKQAIKFAKEHCVSGKGPIVLEMDTYRYHGHSMSDPGSTYRTRDEITGIR 302 Query: 306 SNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 DP+E++RK ++ ++ ++K IE RKI++ +V ++ EP P E Sbjct: 303 QERDPVERLRKLIVEHELLDTAEIKAIEKAQRKIVDEAVAAGKASPEP-PVE 353 >gi|255535541|ref|YP_003095912.1| Pyruvate dehydrogenase E1 component alpha subunit [Flavobacteriaceae bacterium 3519-10] gi|255341737|gb|ACU07850.1| Pyruvate dehydrogenase E1 component alpha subunit [Flavobacteriaceae bacterium 3519-10] Length = 339 Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 147/319 (46%), Positives = 198/319 (62%), Gaps = 4/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK--MSLTE 101 + EF+KE L Y M + RRFE+K LY + GF HL GQEA+ G M LT+ Sbjct: 5 MKEFSKEVYLKWYEEMTMWRRFEDKCRSLYLKQKIRGFLHLYNGQEAIPAGFTHAMDLTK 64 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D MITAYR H H +A GVD +I+AEL G+ G S G GGSMH+FS + FYGGHGIVG Sbjct: 65 -DSMITAYRCHIHPMAMGVDPKRILAELCGKATGTSGGMGGSMHIFSKEKRFYGGHGIVG 123 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG GIAFA+KY + + + FGDGAA QG ++E+FN+A W L V++V+ENNQYA Sbjct: 124 GQIPLGAGIAFADKYFETGGVNICFFGDGAARQGSLHETFNMAMNWKLPVVFVVENNQYA 183 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV R + + K G+ + +P + VD MD V +A+ R GP IE T Sbjct: 184 MGTSVKRTANHEDIYKLGLGYEMPCLPVDAMDPEKVAEAAFEAIERARRGDGPTFIEART 243 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR+RGHSMSD YR+++E+ E + + DPIE V+ R+L N WA+E +L I+ ++ + Sbjct: 244 YRFRGHSMSDAEAYRSKDEVAEYKKD-DPIEIVKHRILENSWATEDELTAIDEKSKEFVE 302 Query: 342 NSVEFAQSDKEPDPAELYS 360 VEF + P ++Y Sbjct: 303 ECVEFMEQSPYPTAEKVYE 321 >gi|161833850|ref|YP_001598046.1| pyruvate dehydrogenase E1 component subunit alpha [Candidatus Sulcia muelleri GWSS] gi|293977961|ref|YP_003543391.1| pyruvate dehydrogenase E1 component subunit alpha [Candidatus Sulcia muelleri DMIN] gi|152206340|gb|ABS30650.1| pyruvate dehydrogenase E1 component, alpha subunit [Candidatus Sulcia muelleri GWSS] gi|292667892|gb|ADE35527.1| pyruvate dehydrogenase E1 component, alpha subunit [Candidatus Sulcia muelleri DMIN] Length = 332 Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 141/314 (44%), Positives = 195/314 (62%), Gaps = 2/314 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI 106 N + L Y+ M R+FE+K LY + GF HL GQEA+ G+ ++ + D+MI Sbjct: 5 NNDIYLKWYKDMSFWRKFEDKCRSLYLKQKIRGFLHLYNGQEAIPAGLVHAMDLKKDKMI 64 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR H +A GV+ IMAEL G+ G S G GGSMH+FS K FYGGHGIVG Q+ L Sbjct: 65 TAYRCHILPIAMGVNPKNIMAELFGKNTGTSCGMGGSMHIFSKKYRFYGGHGIVGGQIPL 124 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIAFA+KY D + + GDGA NQG ++E+FN+A +W L V+++ ENN+YAMGTSV Sbjct: 125 GAGIAFADKYFSRDAVTITIMGDGAVNQGSLHETFNMAMIWKLPVVFICENNRYAMGTSV 184 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+S + K G S+ +P VDGMD + A++ R GP +++LTYRYRG Sbjct: 185 KRSSNIKDIYKIGFSYKMPSFCVDGMDPLKIYEHAYNAISRARNGNGPTFLDILTYRYRG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSM+D YR+++E+NE + N DPI ++K +L NK +E L + + K IN V+F Sbjct: 245 HSMTDAETYRSKKEVNESK-NRDPILLIKKFILKNKIVTEKVLNSFQDEINKKINECVKF 303 Query: 347 AQSDKEPDPAELYS 360 A+ + +LYS Sbjct: 304 AELSDSTNIEKLYS 317 >gi|307103162|gb|EFN51425.1| hypothetical protein CHLNCDRAFT_141042 [Chlorella variabilis] Length = 331 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 139/272 (51%), Positives = 183/272 (67%), Gaps = 10/272 (3%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 K++ L+ ++ + +RR E A LY + GFCHL GQEAVIVG++ +L D +IT Sbjct: 66 TKDELLAYFKQLYRLRRMEISADMLYKAKAIRGFCHLYDGQEAVIVGLEAALDHNDSIIT 125 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR H +A G S+++ EL GR G SKGKGGSMHM+ + F+GG GIVGAQV LG Sbjct: 126 SYRNHATHVARGGTVSEVIGELMGRTTGASKGKGGSMHMYRREANFFGGQGIVGAQVPLG 185 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+A A++Y + + V +GDGAANQGQ++ESFN+AALW+L I+V ENN Y MGT+ Sbjct: 186 TGLALAHQYNGTGGVAVAMYGDGAANQGQIFESFNMAALWDLPCIFVCENNHYGMGTAEW 245 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRY 284 RA+ F RG +PGM+ DGMD+ AVK +A AY + H GPII+EM TYRY Sbjct: 246 RAAKSPAFYTRGDY--MPGMKCDGMDVLAVK----QAFAYAKQHAVANGPIILEMDTYRY 299 Query: 285 RGHSMSDP-ANYRTREEINEMRSNHDPIEQVR 315 GHSMSDP + YRTR+EI+ +R DP+E VR Sbjct: 300 HGHSMSDPGSTYRTRDEISSIRQQRDPVEHVR 331 >gi|78223956|ref|YP_385703.1| dehydrogenase, E1 component [Geobacter metallireducens GS-15] gi|78195211|gb|ABB32978.1| Dehydrogenase, E1 component [Geobacter metallireducens GS-15] Length = 325 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 131/307 (42%), Positives = 185/307 (60%), Gaps = 1/307 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M+L R FEE + Y G + GF HL GQEAV VG L D +++AYREH Sbjct: 18 YEQMVLSREFEESCAEQYTKGHITGFLHLYSGQEAVAVGATAGLHRDDYILSAYREHAQA 77 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G + ++MAEL G++ GI KGKGGSMH+F F GG+ IVG Q + G+AFA K Sbjct: 78 IVRGAEPRRVMAELFGKRTGICKGKGGSMHLFDPNLSFMGGYAIVGGQFPIAVGLAFAAK 137 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +R+ +I FGDGAANQG +ES N A LW L V+++ ENN Y +GTSV RASA + Sbjct: 138 FRKEGRIVACFFGDGAANQGTFHESLNWARLWELPVLFICENNSYGIGTSVERASALPDI 197 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 +R ++IP +V GMD+ AV + A + R P +IE +TYR+RGHSMSDP Y Sbjct: 198 HRRTCGYDIPSERVHGMDVIAVYEAVKWAAEWVREQNRPFLIEAITYRFRGHSMSDPGKY 257 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R+ E+ E+ + DPI RL+ + A+E L+ I+ + ++V+FA+ P+ Sbjct: 258 RSLAEV-ELWKSRDPIPAFANRLVEEEIATEAQLEGIKQQALVTVADAVKFAEDSPWPED 316 Query: 356 AELYSDI 362 +E++ D+ Sbjct: 317 SEVWEDV 323 >gi|254414376|ref|ZP_05028143.1| pyruvate dehydrogenase E1 component, alpha subunit [Microcoleus chthonoplastes PCC 7420] gi|196179051|gb|EDX74048.1| pyruvate dehydrogenase E1 component, alpha subunit [Microcoleus chthonoplastes PCC 7420] Length = 343 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 138/335 (41%), Positives = 207/335 (61%), Gaps = 11/335 (3%) Query: 39 LEGFEVS--EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 L F+V + +++ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ Sbjct: 7 LPKFQVQDGQITRDEGLLLYEDMVLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVI 66 Query: 97 MSLT-EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 ++ + D + + YR+H H L+ GV ++MAEL G+ G SKG+GGSMH+FS + G Sbjct: 67 RAMRRDYDYVCSTYRDHVHALSAGVPPREVMAELFGKATGCSKGRGGSMHLFSEPHHLLG 126 Query: 156 GHGIVGAQVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWN 208 G V + + TG AF +KY R +D++ FGDGA N GQ +E N+AALW Sbjct: 127 GFAFVAEGIPVATGAAFTSKYHRDGLGDPNADQVTACFFGDGACNNGQFFECLNMAALWK 186 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L +IYV+ENN++A+G + RA++Q K+ F +PG++VDGMD+ AV + +AVA Sbjct: 187 LPIIYVVENNKWAIGMAHERATSQPEIYKKASVFGMPGIEVDGMDVLAVHSVAQEAVARA 246 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 RA +GP +IE LTYR+RGHS++DP RT EE + DPI+++ L A E + Sbjct: 247 RAGEGPTLIEALTYRFRGHSLADPDELRTSEE-KDFWMTRDPIKKLTAYLTEQNLADEEE 305 Query: 329 LKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 LK I+ +++++N++V+FAQ+ EPD +EL+ I Sbjct: 306 LKAIDKRIQEVLNDAVQFAQTSPEPDKSELHRYIF 340 >gi|148263337|ref|YP_001230043.1| pyruvate dehydrogenase (acetyl-transferring) [Geobacter uraniireducens Rf4] gi|146396837|gb|ABQ25470.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacter uraniireducens Rf4] Length = 325 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 130/312 (41%), Positives = 183/312 (58%), Gaps = 1/312 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L Y M+L R FEE + Y G + GF HL GQEAV VG +L + D +++AYREH Sbjct: 15 LKMYEQMVLCREFEESCAEQYTKGHITGFLHLYSGQEAVAVGSTRALHKDDYILSAYREH 74 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 + G + ++MAEL G+ G+ KGKGGSMH+F F GG+ IVG Q + G+AF Sbjct: 75 AQAIVRGAEPKRVMAELFGKATGLCKGKGGSMHLFDPDLSFMGGYAIVGGQFPIAVGLAF 134 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K+R+ +I FGDGA NQG +E N A LW L V++V ENN Y +GT V R+SA Sbjct: 135 AAKFRQEGRIAACFFGDGAVNQGNFHEGLNWARLWELPVLFVCENNLYGIGTEVHRSSAL 194 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + KR + +P QVDGMD+ AV + A + R H ++E +TYR+RGHSM+DP Sbjct: 195 ADIHKRTCGYEVPSTQVDGMDVMAVYQAIKYAAEWVREHNSAYLVEAMTYRFRGHSMADP 254 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR+ E+ E+ + DP+ KRL+ + A + L I ++ +V FA+ Sbjct: 255 GKYRSAAEL-ELWKSRDPLPNFGKRLIEEEIAGQTQLDAIRKEAVAVVQEAVRFAEESPW 313 Query: 353 PDPAELYSDILI 364 P+ AE+Y+DI + Sbjct: 314 PEDAEVYNDIYV 325 >gi|298491054|ref|YP_003721231.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha ['Nostoc azollae' 0708] gi|298232972|gb|ADI64108.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit ['Nostoc azollae' 0708] Length = 345 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 136/327 (41%), Positives = 209/327 (63%), Gaps = 10/327 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM-KMSLTEGDQ 104 + K + L Y M L R FE+K ++Y G + GF HL GQEAV G+ + ++ G+ Sbjct: 16 QITKVEGLRLYEDMTLGRFFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGIIQGAMRPGED 75 Query: 105 MITA-YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +++ YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS ++ GG+ V Sbjct: 76 FVSSTYRDHVHALSSGVPAREVMAELFGKATGCSKGRGGSMHMFSAEHRLLGGYAFVAEG 135 Query: 164 VSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + + G AF +KYRR +D++ FGDGAAN GQ +E+ N+AALW L +++V+E Sbjct: 136 IPVAAGAAFQSKYRREVLGDKNADQVTACFFGDGAANNGQFFETLNMAALWKLPILFVVE 195 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN++A+G + RA++ K+ FN+ G++VDGMD+ AV+ +AVA RA +GP + Sbjct: 196 NNKWAIGMAHDRATSDPEIHKKASVFNMVGVEVDGMDVLAVRQVAQEAVARARAGEGPTL 255 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 IE +TYR+RGHS++DP R++EE E + DPI+++ L+ A+ +LK IE + Sbjct: 256 IEAMTYRFRGHSLADPDELRSKEE-KEYWFSRDPIKKLATYLVEQNLATGEELKAIEKKI 314 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 +++I+ +V+FA+S EPD +ELY I Sbjct: 315 QEVIDEAVKFAESSPEPDASELYRFIF 341 >gi|223995699|ref|XP_002287523.1| pyruvate dehydrogenase [Thalassiosira pseudonana CCMP1335] gi|220976639|gb|EED94966.1| pyruvate dehydrogenase [Thalassiosira pseudonana CCMP1335] Length = 375 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 139/313 (44%), Positives = 195/313 (62%), Gaps = 7/313 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K++ LS + LM +RR E Y + GFCHL GQEAV G+ + D Sbjct: 28 EMTKDELLSHFELMYTMRRMEITCDNEYKARAIRGFCHLYDGQEAVATGINAAFDPEDSW 87 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YR H LA G + ++ EL G G +KGKGGSMH ++ + F+GG GIVGAQV Sbjct: 88 ITSYRCHCTALARGGSVASVLGELFGHVDGQTKGKGGSMHFYNKAHNFFGGQGIVGAQVP 147 Query: 166 LGTGIAFANKYRRSD----KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 +G G+AFAN Y + ++ + C+GDGAANQGQ++ES N+A+LW L +I+ IENN Y Sbjct: 148 VGLGLAFANHYNATPGKPMQVAIACYGDGAANQGQIWESANMASLWKLPMIFCIENNHYG 207 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTS+ R S+ +++ K G +IPG+++DGM++ AVK M Y GP+ +EM+T Sbjct: 208 MGTSMDRHSSHSDYYKMGN--HIPGVRIDGMNVLAVKEGMRFVKDYVGNGNGPMYVEMMT 265 Query: 282 YRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YRY GHSMSDP YR REEI RS DP+E V++ L+ + ++KEIE +RK + Sbjct: 266 YRYHGHSMSDPGTTYRNREEIALTRSTRDPLEFVKRTLVDAGFTDAEEIKEIEKRIRKDV 325 Query: 341 NNSVEFAQSDKEP 353 N V+ A++ +P Sbjct: 326 ANQVKQAKASSKP 338 >gi|156555346|ref|XP_001604691.1| PREDICTED: similar to L(B002) [Nasonia vitripennis] Length = 361 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 139/324 (42%), Positives = 200/324 (61%), Gaps = 12/324 (3%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E +E+ + ML IRR E KA +LY ++ GFCHL GQEAV V + + E D Sbjct: 31 AELTEEEATLMLQRMLYIRRMENKAAELYRARLINGFCHLYSGQEAVAVATRSVMQENDT 90 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR H G A ++ AEL GR+ G SKGKGGSMHM+ FYGG GIVG QV Sbjct: 91 VITAYRCHAFASMFGSTARQVFAELMGRKTGTSKGKGGSMHMYGPN--FYGGEGIVGGQV 148 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +G G+ FA+KY + + +GDGAA+QGQ++E++N++ LWNL +Y+ ENN+Y MGT Sbjct: 149 PIGAGLGFAHKYNGNGAVSFTLYGDGAASQGQLHEAWNMSKLWNLPTVYICENNKYGMGT 208 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLT 281 + R SA F RG IPG++ DGM I V+ +AV + R H +GPI+IE+ T Sbjct: 209 ATHRHSANDKFYTRGDL--IPGIKADGMKIEEVR----EAVKFGREHALREGPIVIEVTT 262 Query: 282 YRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YRY GHSMSDP +YRTREE+ ++ HDPI+ L S+ D++ + + K + Sbjct: 263 YRYFGHSMSDPGTSYRTREEVKAIQEKHDPIKNFTTLLEEKNLKSKEDIEAMRKAIFKDV 322 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 + +E ++ D P+ +++ +D+ + Sbjct: 323 DTQLEESKKDAWPEVSDIAADLYV 346 >gi|294055706|ref|YP_003549364.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coraliomargarita akajimensis DSM 45221] gi|293615039|gb|ADE55194.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coraliomargarita akajimensis DSM 45221] Length = 368 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 200/320 (62%), Gaps = 2/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ + E++L Y++++ IRRFEE++ Q Y G +GGF HL IGQEAV G+ + E D Sbjct: 29 AKLSAEEKLDLYKMIVGIRRFEERSLQAYNQGKIGGFLHLYIGQEAVATGIVSLMEENDH 88 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR+HGH LA G+ ++ MAE+ G+ G SKGKGGSMH F+ ++GGHGIV Q Sbjct: 89 IITAYRDHGHALAVGMSMNECMAEMYGKYTGCSKGKGGSMHFFAPDKNYWGGHGIVAGQT 148 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AF KY+ + GDGA NQG E+ N+A+LW+L V++VIENN Y+MGT Sbjct: 149 PLGAGLAFGLKYKGLKGCALAFLGDGAVNQGSFMETLNLASLWDLPVVFVIENNGYSMGT 208 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S++R+SA+ N + R F++ +G D+ V+ ++A+ R P ++E+ TYRY Sbjct: 209 SLARSSAEENLAHRADGFDMEWEVCNGHDVFEVREVANRAMTRARETHKPFLLEIRTYRY 268 Query: 285 RGHSMSDPAN--YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RGHS++D + YRT+EEI E + DPI ++ +LL + +E +KEI + + Sbjct: 269 RGHSVADANHEKYRTKEEIEEYKKTKDPINVLKAQLLADGTLTEELVKEINAEKKAEADA 328 Query: 343 SVEFAQSDKEPDPAELYSDI 362 S +FA E+ +D+ Sbjct: 329 SAKFADESPVAPREEIQTDV 348 >gi|169619631|ref|XP_001803228.1| hypothetical protein SNOG_13014 [Phaeosphaeria nodorum SN15] gi|111058694|gb|EAT79814.1| hypothetical protein SNOG_13014 [Phaeosphaeria nodorum SN15] Length = 399 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 145/310 (46%), Positives = 196/310 (63%), Gaps = 13/310 (4%) Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 R E A +LY + GFCHL GQE V VG++ ++ +ITAYR HG L G Sbjct: 59 RMEIAADRLYKEKKIRGFCHLSTGQEPVAVGIEHAIEREHHLITAYRCHGFALMRGGTVK 118 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I+ EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV + GIAFA +Y + Sbjct: 119 SIIGELLGRREGIAYGKGGSMHMFAP--GFYGGNGIVGAQVPVAAGIAFACQYENKKNVT 176 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIE------NNQYAMGTSVSRASAQTNFSK 237 + +GDGA+NQGQV+E++N+A LWNL +I+ E NN+Y MGT+ +R+SA T++ K Sbjct: 177 LALYGDGASNQGQVFEAYNMAKLWNLPIIFGCESRVDLDNNKYGMGTAANRSSAITDYYK 236 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYR 296 RG IPG++++GMD+ AVKA + Y A KGP++ E +TYRY GHSMSDP YR Sbjct: 237 RGQY--IPGLKINGMDVLAVKAAVKYGKEYAAAGKGPLVYEYVTYRYGGHSMSDPGTTYR 294 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 TREEI MRS +DPI ++++LL SE +LK I+ R ++ V A+ P+ Sbjct: 295 TREEIQRMRSTNDPIAGLKQKLLDWGITSEEELKSIDKQARSEVDAEVAEAEQMAPPEAT 354 Query: 357 E--LYSDILI 364 LY DI + Sbjct: 355 GKVLYEDIYV 364 >gi|182414662|ref|YP_001819728.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Opitutus terrae PB90-1] gi|177841876|gb|ACB76128.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Opitutus terrae PB90-1] Length = 365 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 138/283 (48%), Positives = 185/283 (65%), Gaps = 7/283 (2%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 + ++ YR M+ IRRFEE++ + Y +GGF HL IGQEAV VG + + D +ITAY Sbjct: 34 DDKIGLYRKMMRIRRFEERSLRAYQGKKIGGFLHLYIGQEAVAVGCCSLMGQHDHVITAY 93 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+HGH +A G+D +MAEL G+ G SKGKGGSMH F+ F+GGHGIVG QV LGTG Sbjct: 94 RDHGHAIAVGMDTKPLMAELYGKVTGCSKGKGGSMHYFAPDKNFWGGHGIVGGQVPLGTG 153 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +A+A KY+ + GDGA NQG V E++N+A+LWNL V++VIENN Y+MGTS R+ Sbjct: 154 LAYAIKYKGLKGAAMAFMGDGAVNQGAVSEAYNLASLWNLPVVFVIENNGYSMGTSQERS 213 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 SA ++R +++ Q G D+ V+ATMDK + R P +E+ TYRYRGHS+ Sbjct: 214 SA-GELAQRAAGYDMEWGQCRGHDVYEVRATMDKFLTLAREKSRPSTVEIDTYRYRGHSV 272 Query: 290 SDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 +DP N YR+++EI E R DPI+ L N+ SEG L E Sbjct: 273 ADPDNTYRSKKEIEEYRRTKDPIQ-----LFQNQLVSEGVLNE 310 >gi|120437224|ref|YP_862910.1| pyruvate dehydrogenase E1 component subunit alpha [Gramella forsetii KT0803] gi|117579374|emb|CAL67843.1| pyruvate dehydrogenase E1 component subunit alpha [Gramella forsetii KT0803] Length = 333 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 140/318 (44%), Positives = 196/318 (61%), Gaps = 2/318 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EG 102 + + K L Y ML R+FE+K Q+Y V GF HL GQEA++ G ++ E Sbjct: 1 MKKITKATYLKWYEDMLFWRKFEDKLAQVYIQQKVRGFLHLYNGQEAILAGALHAMDLEK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H + GVD K+MAEL G++ G S G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 DRMITAYRNHVQPIGMGVDPKKVMAELYGKKTGTSMGLGGSMHIFSKEHRFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ +G G+AFA+KY + D + + GDGA QG ++E+ N+A WNL V++ +ENN YAM Sbjct: 121 QIPVGAGLAFADKYHKRDNVTLTFMGDGAVRQGSLHETLNMAVNWNLPVVFCVENNGYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV+R S T K G + +P VD MD V +D+A+ R GP +E+ TY Sbjct: 181 GTSVARTSKDTEIWKLGNGYEMPCGPVDAMDPVKVAEALDEAITRARKGNGPTFLELKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD YRT++E+ + + DPI +V+K + K+ASE ++KEI+ V++ + Sbjct: 241 RYRGHSMSDAQKYRTKDEVADYQK-LDPISKVKKVIKDKKYASEKEIKEIDKRVKEKVLE 299 Query: 343 SVEFAQSDKEPDPAELYS 360 +FA PD +Y Sbjct: 300 CEKFADESDFPDKNIMYD 317 >gi|291084757|ref|NP_001166927.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 4 precursor [Homo sapiens] gi|296235074|ref|XP_002762741.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 1 [Callithrix jacchus] gi|332224042|ref|XP_003261176.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 2 [Nomascus leucogenys] gi|221041368|dbj|BAH12361.1| unnamed protein product [Homo sapiens] Length = 359 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 160/335 (47%), Positives = 213/335 (63%), Gaps = 38/335 (11%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ KN FYGG+GIVGAQ GQ++E++N+A Sbjct: 154 HMYA-KN-FYGGNGIVGAQ-------------------------------GQIFEAYNMA 180 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A Sbjct: 181 ALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFA 238 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ Sbjct: 239 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 298 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 299 ASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 333 >gi|54289527|gb|AAV32070.1| pyruvate dehydrogenase E1 alpha subunit [Nyctotherus ovalis] Length = 299 Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 133/279 (47%), Positives = 187/279 (67%), Gaps = 4/279 (1%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 GQEAV VG++ +T D +ITAYR HG L GV K+M+E+ GR GISKGKGGSMHM Sbjct: 3 GQEAVSVGIEAGITREDHLITAYRCHGIALGRGVSVYKLMSEMMGRSTGISKGKGGSMHM 62 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 KN +YGG+GIVGA V +GTG+AF KY + ++C + +GDGAANQGQV+E+ N+A L Sbjct: 63 TLRKNKYYGGNGIVGAHVPVGTGVAFGIKYEKKKEVCAIVYGDGAANQGQVFEAANMAML 122 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 W L +Y+ ENN +AMGTS R++A T + + +PG++ GM + AV+ + A Sbjct: 123 WKLPAVYICENNGFAMGTSCERSTANTKYYTKLTP--VPGLKSTGMCLFAVREAVKFARD 180 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 +C KGPI +E+ TYRY GHSMSD YRT EE++++R DPIE V++ +L NK AS Sbjct: 181 WCLQGKGPICLEVETYRYHGHSMSDAGTTYRTHEEVSKVRKEKDPIETVKRLILSNKVAS 240 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDP-AELYSDIL 363 E +LK+IE +R+ + + A+ PDP +L ++++ Sbjct: 241 ESELKDIEKEIRQHVEEETKKARESPWPDPEKDLMTNVM 279 >gi|213963753|ref|ZP_03392003.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Capnocytophaga sputigena Capno] gi|213953633|gb|EEB64965.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Capnocytophaga sputigena Capno] Length = 332 Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 137/319 (42%), Positives = 194/319 (60%), Gaps = 4/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG--MKMSLTE 101 + +F+KE L Y ML R+FE+K +Y V GF HL GQEAV G M LT+ Sbjct: 1 MKKFDKEVYLKWYEDMLFWRKFEDKLAAVYIQQKVRGFLHLYSGQEAVAAGCLHAMDLTK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MIT+YR H + GVD +IMAEL G+ G S G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 -DKMITSYRCHVQPIGLGVDPKRIMAELYGKATGTSLGLGGSMHIFSKEHHFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q++LG G+AFA+KY D + + GDGA QG +E+ N+A LW L V++++ENN YA Sbjct: 120 GQIALGAGLAFADKYFNRDAVTLTFMGDGAVRQGAFHETLNLAMLWKLPVVFIVENNHYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV R + + K G+ + +P VDGM V + +A+ R GP ++++ T Sbjct: 180 MGTSVERTANHVDIWKLGLGYEMPCQAVDGMHPETVAEAVYEAIERARRGDGPTLLDIRT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD +YRT+EE+ E + DPI V + K+A++ +L+ IE +++ + Sbjct: 240 YRYRGHSMSDAQHYRTKEEVEEYKKQ-DPITNVLAVIKKKKYATDAELEAIEERIKERVA 298 Query: 342 NSVEFAQSDKEPDPAELYS 360 FA+ P+ +Y Sbjct: 299 ECERFAEESPYPEKHIMYD 317 >gi|262340886|ref|YP_003283741.1| pyruvate dehydrogenase E1 component subunit alpha [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272223|gb|ACY40131.1| pyruvate dehydrogenase E1 component subunit alpha [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 334 Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 134/318 (42%), Positives = 197/318 (61%), Gaps = 2/318 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEG 102 + E E L ++ M R+FE+K LY + GF HL GQEA+ G+ ++ Sbjct: 1 MKEITTETYLKWFKDMSFWRKFEDKCRSLYLKQKIRGFLHLYNGQEAIPAGLIHAMDMSK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D++ITAYR H ++ GVD K+MAEL G++ G S G GGSMH+FS K+ FYGGHGIVG Sbjct: 61 DKIITAYRCHILPISMGVDPKKVMAELLGKKTGTSHGMGGSMHIFSKKHRFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG GIAF++KY + + GDGA QG ++E+FN+A +W L V+++ ENN+YAM Sbjct: 121 QIPLGAGIAFSDKYFNRKAVTLTLMGDGAVRQGSLHETFNMAMIWKLPVVFICENNKYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R++ K G+S+ +P VDGMD + A+ R +G +++ TY Sbjct: 181 GTSVERSTNVEEIYKIGLSYGMPSNSVDGMDPEKIARAAFIAIERARKGEGATFLDIQTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YR++EE++ + DPI +++ ++ NKW + +LK IE V+K + + Sbjct: 241 RYRGHSMSDAESYRSKEEVHSYKKK-DPILKLKNIIIQNKWETIENLKTIENEVKKEVES 299 Query: 343 SVEFAQSDKEPDPAELYS 360 VEFA+ P E+Y+ Sbjct: 300 CVEFAEKSDPPSLEEMYN 317 >gi|116328023|ref|YP_797743.1| pyruvate dehydrogenase (lipoamide), alpha subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120767|gb|ABJ78810.1| Pyruvate dehydrogenase (lipoamide), alpha subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 327 Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 137/307 (44%), Positives = 202/307 (65%), Gaps = 2/307 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ MLLIRRFEE A + Y G +GGFCHL IGQEAV VG +L E D +++ YR+HGH Sbjct: 18 YKQMLLIRRFEEGAAKSYSTGKIGGFCHLYIGQEAVGVGSIAALQEQDYIVSTYRDHGHA 77 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G+D +MAEL G++ GIS G GGSMH F F GGHGIVG +SL GIA+A+K Sbjct: 78 LARGLDPKALMAELFGKKTGISSGYGGSMHFFDKSKRFMGGHGIVGGHISLAAGIAYASK 137 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 ++ + + + FG+GAAN G +E N+AA+W L ++ + ENN YAMGT RA + + Sbjct: 138 FKNENSVTICFFGEGAANIGSFHEGMNLAAIWKLPLVMICENNHYAMGTPEYRALSVKDV 197 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 S R +++I ++G ++R V+ + AV R +GP ++E+ TYR+RGHSMSDPA Y Sbjct: 198 SVRAGAYDIARDHIEGDEVRKVRDHVSVAVERARRGEGPTLMEISTYRFRGHSMSDPAKY 257 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RT+EE++ + + DP+ + ++ LLH++W E +L++++M + + S+ FA +EP Sbjct: 258 RTKEELDRYKQS-DPLLRAKQDLLHSEWTEE-ELEKLDMELSTQVEESITFADQSEEPPL 315 Query: 356 AELYSDI 362 LY ++ Sbjct: 316 GWLYKNV 322 >gi|198474337|ref|XP_002132667.1| GA25763 [Drosophila pseudoobscura pseudoobscura] gi|198138347|gb|EDY70069.1| GA25763 [Drosophila pseudoobscura pseudoobscura] Length = 414 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 150/325 (46%), Positives = 204/325 (62%), Gaps = 7/325 (2%) Query: 40 EGFE-VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 EG E V K Q L YR + +R E A +LY +V GFCHL GQEA VG++ + Sbjct: 68 EGPERVVAIRKSQALKYYRQLATVRLLETAASRLYKEQLVRGFCHLYTGQEACAVGIRAA 127 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 + D +IT YR HG GV A ++AELTGR+ G S GKGGSMHM+ FYGG G Sbjct: 128 MRSNDNLITGYRVHGWAYMMGVPAVGVLAELTGRRSGCSGGKGGSMHMYGRN--FYGGTG 185 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG QV LG G+AF +KY ++ +C+ +GDGAANQGQV+E FN+A LW L +I+V ENN Sbjct: 186 IVGDQVPLGAGVAFTSKYLQNGGVCLALYGDGAANQGQVFECFNMALLWKLPMIFVCENN 245 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 Y MGT RA++ N+ RG +PG+ DG D+ AV++ + A+ + +KGPI++E Sbjct: 246 NYGMGTRSERAASNINYYTRGDL--MPGIWADGQDVLAVRSATEFAIKHA-LNKGPILME 302 Query: 279 MLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 + TYRY GHSMSDP +YRTR+EI ++R HDPI+ R+ L + S +++EI R Sbjct: 303 LGTYRYGGHSMSDPGTSYRTRDEIQKVRRQHDPIQGFRELCLDQQILSLDEIQEINQVAR 362 Query: 338 KIINNSVEFAQSDKEPDPAELYSDI 362 I ++ A+ D EP L+SD+ Sbjct: 363 LEIEGAIRAARKDDEPPLNNLWSDV 387 >gi|158334526|ref|YP_001515698.1| pyruvate dehydrogenase E1 component subunit alpha [Acaryochloris marina MBIC11017] gi|158304767|gb|ABW26384.1| pyruvate dehydrogenase E1 component, alpha subunit [Acaryochloris marina MBIC11017] Length = 342 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 129/319 (40%), Positives = 199/319 (62%), Gaps = 8/319 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L Y M+L R FE+K ++Y G + GF HL GQEAV G+ ++ D + + YR+H Sbjct: 23 LILYEDMVLGRAFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGIAKAMRPDDFICSTYRDH 82 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 H L+ GV A ++MAEL G++ G SKG+GGSMH+FS+++ GG V + + TG+AF Sbjct: 83 VHALSAGVPARQVMAELFGKETGCSKGRGGSMHLFSSEHNLIGGFAFVAEGIPVATGVAF 142 Query: 173 ANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 ++YRR SD + FGDGA+N GQ +E N+A+LW L +++V+ENN++A+G + Sbjct: 143 QSRYRREAMGDAASDHVTACFFGDGASNNGQFFECLNMASLWKLPILFVVENNKWAIGMA 202 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RAS++T K+ F + G++VDGMD+ AV+ A+A RA +GP +IE LTYR+R Sbjct: 203 HERASSETEIYKKAKVFGMEGVEVDGMDVLAVREVAQTAIARARAGEGPTLIEALTYRFR 262 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS++DP R+ E E + DPI + + L+ K E +L +I+ ++ +I +V+ Sbjct: 263 GHSLADPDELRSAAEKEEWLAR-DPITKFKSYLVDQKLVKEQELLDIDRKIQTLIEEAVQ 321 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ +P P +LY I + Sbjct: 322 FAEESPDPKPEDLYRYIFV 340 >gi|168042871|ref|XP_001773910.1| predicted protein [Physcomitrella patens subsp. patens] gi|162674754|gb|EDQ61258.1| predicted protein [Physcomitrella patens subsp. patens] Length = 325 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 137/305 (44%), Positives = 197/305 (64%), Gaps = 3/305 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M +IRR E A L+ M+ GFCHL GQEAV VG++ +L+ D +ITAYR+HG L Sbjct: 1 MQIIRRAEIAADMLFKSQMIRGFCHLYDGQEAVSVGLERALSYDDNVITAYRDHGIFLGR 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G ++ +EL G++ G + GKGGSMH++ ++ F+GG GIVG LG G+AF KY + Sbjct: 61 GGTVFELFSELMGKRTGCALGKGGSMHLYHREHNFWGGWGIVGTTPPLGAGLAFGQKYEK 120 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + +GDGA NQGQ++E+ N+AALWNL +I VIENN + MGT+ R+S +T R Sbjct: 121 KPNVTAAIYGDGAGNQGQLFEAQNLAALWNLPLILVIENNHFGMGTAEWRSSKKTTHYDR 180 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRT 297 VS+ IPG++ DGMD+ AV +C + KGPI +E TYRY GHSMSDP + YR+ Sbjct: 181 -VSY-IPGIKTDGMDVFAVGEAFKLCKEHCLSGKGPITLEADTYRYHGHSMSDPGSTYRS 238 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 R+EI MR DPIE+VRK +L + A+ +LK+++ +R ++ + A+ + P E Sbjct: 239 RQEIQGMRQERDPIERVRKIILKEELATNEELKDLDKQIRHEVDEASAKAREAEFPGEEE 298 Query: 358 LYSDI 362 L+++I Sbjct: 299 LFANI 303 >gi|315224290|ref|ZP_07866124.1| pyruvate dehydrogenase complex E1 component alpha subunit [Capnocytophaga ochracea F0287] gi|314945680|gb|EFS97695.1| pyruvate dehydrogenase complex E1 component alpha subunit [Capnocytophaga ochracea F0287] Length = 332 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 135/318 (42%), Positives = 195/318 (61%), Gaps = 2/318 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEG 102 + +F+KE L Y ML R+FE+K +Y V GF HL GQEAV G ++ Sbjct: 1 MKKFDKEVYLKWYEDMLFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVAAGCLHAIDPTK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MIT+YR H H + GVD +IMAEL G+ G S G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 DKMITSYRCHVHPIGLGVDPKRIMAELYGKGTGTSHGLGGSMHIFSKEHHFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q++LG G+AFA+KY + + + GDGA QG +E+ N+A LW L V++++ENN YAM Sbjct: 121 QIALGAGLAFADKYFNREAVTLTFMGDGAVRQGAFHETMNMAMLWKLPVVFIVENNHYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R + + K G+ + +P VDGM V + +AV R +GP ++++ TY Sbjct: 181 GTSVERTANHVDIWKLGLGYQMPCQPVDGMHPETVAEAVYEAVERARRGEGPTLLDIRTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YRT+EE+ E + DPI V + K+A++ +L+ I+ V++ + Sbjct: 241 RYRGHSMSDAQHYRTKEEVEEYKKQ-DPITNVLAVIKEKKYATDAELEAIDERVKERVAE 299 Query: 343 SVEFAQSDKEPDPAELYS 360 +FA+ P+ +Y Sbjct: 300 CEKFAEESPYPETHIMYD 317 >gi|22298712|ref|NP_681959.1| pyruvate dehydrogenase E1 component, alpha subunit [Thermosynechococcus elongatus BP-1] gi|22294893|dbj|BAC08721.1| pyruvate dehydrogenase E1 component, alpha subunit [Thermosynechococcus elongatus BP-1] Length = 342 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 137/323 (42%), Positives = 201/323 (62%), Gaps = 8/323 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +EQ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ ++ D + + Sbjct: 18 TREQGLMLYEDMVLGRTFEDKCAEMYYRGRMFGFVHLYNGQEAVSTGVIKAMRPDDYVCS 77 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ G+ A ++MAEL G+ G SKG+GGSMH+FS K+ F GG V + + Sbjct: 78 TYRDHVHALSAGIPAREVMAELFGKATGCSKGRGGSMHLFSAKHNFLGGFAFVAEGIPVA 137 Query: 168 TGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 TG AF YRR +D++ FGDGA+N GQ +E N+AALW L +++V+ENN++ Sbjct: 138 TGAAFQTLYRRQVMGDAKADQVTACFFGDGASNNGQFFECLNMAALWKLPILFVVENNKW 197 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+G + RAS++T K+ F + G +VDGMD+ AV+ + A+A RA +GP +IE L Sbjct: 198 AIGMAHERASSETEIYKKAKVFGMVGEEVDGMDVLAVRTVAEAAIARARAGEGPTLIEAL 257 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYR+RGHS++DP R++EE E DPI+++ L+ + A+ DL+ IE V+ I+ Sbjct: 258 TYRFRGHSLADPDELRSKEE-KEFWLKRDPIKKLGAYLVEQELATGEDLRAIEQKVQAIV 316 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 ++V FA+ EP P ELY I Sbjct: 317 EDAVTFAEQSPEPKPEELYDYIF 339 >gi|261749597|ref|YP_003257283.1| pyruvate dehydrogenase E1 component subunit alpha [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497690|gb|ACX84140.1| pyruvate dehydrogenase E1 component, alpha subunit [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 334 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 134/317 (42%), Positives = 195/317 (61%), Gaps = 2/317 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEG 102 + E E L ++ M R+FE+K LY + GF HL GQEA+ G+ ++ Sbjct: 1 MKEITTETYLKWFQDMSFWRKFEDKCRSLYLKRKIRGFLHLYNGQEALPAGLTYAMDMSK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D++ITAYR H ++ GV+ K+MAEL G+ G S G GGSMH+FS K+ FYGGHGIVG Sbjct: 61 DKIITAYRCHILPISMGVNPKKVMAELLGKVTGTSHGMGGSMHIFSKKHRFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG GIAFA+KY D + + GDGA QG ++E+FN+A +W L V+++ ENNQYAM Sbjct: 121 QIPLGAGIAFADKYFNRDAVTLTLMGDGAIRQGALHETFNMAMIWKLPVVFICENNQYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R++ K G S+ +P VDGMD + A+ R+ G +++ TY Sbjct: 181 GTSVKRSTNIEEIYKIGHSYGMPSFPVDGMDPEKIAKAAYIAIERARSGNGSTFLDIKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YR++EE++ + DPI +++K ++ NKW + L IE ++K ++ Sbjct: 241 RYRGHSMSDTESYRSKEEVHSYKKK-DPILKLKKIIIQNKWETIEWLNSIENKIKKEVDT 299 Query: 343 SVEFAQSDKEPDPAELY 359 VEFA++ +P +Y Sbjct: 300 CVEFAENSDDPSLEHMY 316 >gi|148655863|ref|YP_001276068.1| pyruvate dehydrogenase [Roseiflexus sp. RS-1] gi|148567973|gb|ABQ90118.1| Pyruvate dehydrogenase (acetyl-transferring) [Roseiflexus sp. RS-1] Length = 350 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 130/298 (43%), Positives = 185/298 (62%), Gaps = 1/298 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+LIRRFEEK ++Y +GGF HL IG+EA VG +L D + T YR+HGH Sbjct: 30 YRQMVLIRRFEEKCQEMYTRAKIGGFLHLYIGEEATAVGAIAALRPDDHIFTHYRDHGHA 89 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G+D + +MAEL G+ G SKG GGSMH F+GG+ IVG+ + L TG+A K Sbjct: 90 IARGLDINALMAELFGKVTGCSKGLGGSMHFADASKNFWGGYAIVGSHLPLATGVALGMK 149 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +R D + +V FGDGA N G+ YES N A LW L V++V ENN YAMGT + S+ T Sbjct: 150 MQRKDSVVMVFFGDGATNGGEFYESLNFAQLWKLPVVFVCENNLYAMGTPLEVHSSVTEI 209 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 ++ +F++ +VDG D+ ++ +AV + R+ KGP+++E +TYR+RGHS D Y Sbjct: 210 YRKACAFDMKAERVDGNDVLVMREASLRAVEHARSGKGPVLLEAMTYRFRGHSAQDTQKY 269 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 RT+E+I R N DPI + R LL+ A+E +++I+ + + +V FA EP Sbjct: 270 RTKEDIERHRRN-DPIVRYRTLLLNEGIATEQQIRDIDRMIDDQVEAAVRFADESPEP 326 >gi|195147892|ref|XP_002014908.1| GL18702 [Drosophila persimilis] gi|194106861|gb|EDW28904.1| GL18702 [Drosophila persimilis] Length = 414 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 151/325 (46%), Positives = 202/325 (62%), Gaps = 7/325 (2%) Query: 40 EGFE-VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 EG E V K Q L YR + +R E A +LY +V GFCHL GQEA VG++ + Sbjct: 68 EGPERVVAIRKSQALKYYRQLATVRLLETAASRLYKEQLVRGFCHLYTGQEACAVGIRAA 127 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 + D +IT YR HG GV A ++AELTGR+ G S GKGGSMHM+ FYGG G Sbjct: 128 MRSNDNLITGYRVHGWAYMMGVPAVGVLAELTGRRSGCSGGKGGSMHMYG--RNFYGGTG 185 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG QV LG G+AF +KY + +C+ +GDGAANQGQV+E FN+A LW L +I+V ENN Sbjct: 186 IVGDQVPLGAGVAFTSKYLQDGGVCLALYGDGAANQGQVFECFNMALLWKLPMIFVCENN 245 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 Y MGT RA++ N+ RG +PG+ DG D+ AV++ + A+ + +KGPI++E Sbjct: 246 NYGMGTRSERAASNINYYTRGDL--MPGIWADGQDVLAVRSATEFAIKHA-LNKGPILME 302 Query: 279 MLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 + TYRY GHSMSDP +YRTREEI ++R HDPI+ R+ L + S +++EI R Sbjct: 303 LGTYRYGGHSMSDPGTSYRTREEIQKVRRQHDPIQGFRELCLDQQILSLDEIQEINQVAR 362 Query: 338 KIINNSVEFAQSDKEPDPAELYSDI 362 I ++ A+ D EP L SD+ Sbjct: 363 LEIEGAIRAARKDDEPPLNNLCSDV 387 >gi|116331524|ref|YP_801242.1| pyruvate dehydrogenase (lipoamide), alpha subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116125213|gb|ABJ76484.1| Pyruvate dehydrogenase (lipoamide), alpha subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 327 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 136/307 (44%), Positives = 201/307 (65%), Gaps = 2/307 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ MLLIRRFEE A + Y G +GGFCHL IGQEAV VG +L E D +++ YR+HGH Sbjct: 18 YKQMLLIRRFEEGAAKSYSTGKIGGFCHLYIGQEAVGVGSIAALQEQDYIVSTYRDHGHA 77 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G+D +MAEL G++ GIS G GGSMH F F GGHGIVG +SL GIA+A+K Sbjct: 78 LARGLDPKALMAELFGKKTGISSGYGGSMHFFDKSKRFMGGHGIVGGHISLAAGIAYASK 137 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 ++ + + + FG+GA N G +E N+AA+W L ++ + ENN YAMGT RA + + Sbjct: 138 FKNENSVTICFFGEGAVNIGSFHEGMNLAAIWKLPLVMICENNHYAMGTPEYRALSVKDV 197 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 S R +++I ++G ++R V+ + AV R +GP ++E+ TYR+RGHSMSDPA Y Sbjct: 198 SVRAGAYDIARDHIEGDEVRKVRDHVSVAVERARRGEGPTLMEISTYRFRGHSMSDPAKY 257 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RT+EE++ + + DP+ + ++ LLH++W E +L++++M + + S+ FA +EP Sbjct: 258 RTKEELDRYKQS-DPLLRAKQDLLHSEWTEE-ELEKLDMELSTQVEESITFADQSEEPPL 315 Query: 356 AELYSDI 362 LY ++ Sbjct: 316 GWLYKNV 322 >gi|269925211|ref|YP_003321834.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermobaculum terrenum ATCC BAA-798] gi|269788871|gb|ACZ41012.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermobaculum terrenum ATCC BAA-798] Length = 329 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 137/313 (43%), Positives = 192/313 (61%), Gaps = 3/313 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 NKEQ L YR MLLIR FEE+A QLY +GG+CHL +G+EA +VG S+ E D + T Sbjct: 10 NKEQLLELYRKMLLIRHFEERAAQLYTQAYIGGYCHLNVGEEATVVGALTSIREDDYVFT 69 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YREHGH L G D +MAEL G+ G+SKG+GGSMH+F K+ YGG+GIVG + L Sbjct: 70 YYREHGHALTLGSDPKAVMAELCGKVTGLSKGRGGSMHLFDKKHRLYGGYGIVGGHLPLA 129 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A A +Y+ D I + FG+GA N G +E+ N+A +++L V++ NNQYAMG V Sbjct: 130 VGAAMAIEYKGEDSIVMCLFGEGATNIGAFHEALNLAKVYHLPVLFFCVNNQYAMGARVD 189 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 SA + ++N+P +VDGMD+ AV+ + V R + P+ +E +TYR+RGH Sbjct: 190 EDSAVPEMWMKACAYNMPAEKVDGMDLFAVREVTQRMVEKVRETREPMFLEAITYRFRGH 249 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK-EIEMNVRKIINNSVEF 346 SM+D YRT+EE+ + DPI +R L + +LK +IE V + I + +F Sbjct: 250 SMADAGRYRTQEEVKQWMQR-DPIHLTARR-LEEMGVLDSELKAKIESEVEQEIEEATKF 307 Query: 347 AQSDKEPDPAELY 359 A +PD ++LY Sbjct: 308 AIESPDPDVSDLY 320 >gi|309791437|ref|ZP_07685943.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Oscillochloris trichoides DG6] gi|308226516|gb|EFO80238.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Oscillochloris trichoides DG6] Length = 358 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 124/305 (40%), Positives = 182/305 (59%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y MLL+RRFEE+ ++Y +GG+CHL +G+EA IVG+ +LT D + T YREHG+I Sbjct: 27 YYQMLLLRRFEERTSEMYVKAKIGGYCHLNLGEEATIVGLNAALTPDDYVYTNYREHGYI 86 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D ++MAEL G++ G+S G+GGSMH+F + F GG+ IVG Q L G A+A K Sbjct: 87 LARGADPRRVMAELFGKETGVSGGRGGSMHLFDAERHFMGGYAIVGGQAPLAVGAAYALK 146 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y+ + + GD N G YES N+A LW L V++ I NN Y MGT+V R S++ N Sbjct: 147 YQSRPGVVIAQMGDATTNIGAFYESLNLAKLWQLPVLFFIVNNGYGMGTAVERGSSEPNL 206 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 +K+G +F I G +VDG D+ AV+ + + H P I++++++R+RGHS+ D Y Sbjct: 207 AKKGAAFRIHGERVDGTDVIAVRDAVRRLREKAEQHHEPAILDVVSFRFRGHSVIDADRY 266 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R + R DP+ RLL + + L V + +++FA S +P P Sbjct: 267 RDAGAVRRGREKFDPLTSFATRLLDQQIVDQAFLDTTAQQVDAEVQAAIDFANSSPDPQP 326 Query: 356 AELYS 360 A+LY+ Sbjct: 327 ADLYT 331 >gi|307720478|ref|YP_003891618.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Sulfurimonas autotrophica DSM 16294] gi|306978571|gb|ADN08606.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sulfurimonas autotrophica DSM 16294] Length = 322 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 135/308 (43%), Positives = 193/308 (62%), Gaps = 13/308 (4%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + NK +E Y MLLIRRFEEK Q Y + GF HL IG+EAV VG+ +L++ D + Sbjct: 4 DINKAKEF--YSQMLLIRRFEEKCAQEYSHQKIRGFLHLYIGEEAVGVGVIDALSDEDAI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + YREHG LA G+ A+ IMAEL G+ G+S G+GGSMH++S + FYGG+ IV A + Sbjct: 62 VATYREHGQALARGIPANSIMAELYGKAEGVSHGRGGSMHLYSAQKRFYGGNAIVAAGLP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G+A A+K + +++ + FGDGA +G+ +ES N+AALWNL V++V ENNQY MGT+ Sbjct: 122 FAVGMALADKMAKRNRVTLCLFGDGAVAEGEFHESLNLAALWNLPVLFVCENNQYGMGTA 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + A ++TN SK+ ++ I QVDGMD+ V KA+ +A KGP IE +TYR+R Sbjct: 182 LKYAESETNISKKAAAYKISSHQVDGMDVLEVSKMAQKAIKSIKAGKGPQFIEAITYRFR 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL----KEIEMNVRKIIN 341 HSM D YR + E+ E + DP+ + RL E D+ +EIE + K + Sbjct: 242 AHSMFDAELYRDKSEVQEWK-KRDPLLVFKDRL------KEMDIVINTQEIEKEISKTVE 294 Query: 342 NSVEFAQS 349 ++V FA++ Sbjct: 295 DAVAFAEA 302 >gi|254430581|ref|ZP_05044284.1| pyruvate dehydrogenase E1 component, alpha subunit [Cyanobium sp. PCC 7001] gi|197625034|gb|EDY37593.1| pyruvate dehydrogenase E1 component, alpha subunit [Cyanobium sp. PCC 7001] Length = 376 Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 131/319 (41%), Positives = 196/319 (61%), Gaps = 9/319 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG-MKMSLTEGDQMI 106 N+++ L YR M+L RRFE+K ++Y G + GF HL GQEAV G +K + D Sbjct: 51 NRDEGLMLYRDMVLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIKAMRAQHDWFC 110 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+CGV A ++M+EL G++ G SKG+GGSMH+FS ++ GG+ +G + + Sbjct: 111 STYRDHVHALSCGVPARQVMSELFGKETGCSKGRGGSMHLFSREHHLLGGYAFIGEGIPV 170 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G AF ++Y+R SD + FGDG N GQ YE N+AALW L +++V+ENN+ Sbjct: 171 ALGAAFTSRYKRDALGDSGSDAVTAAFFGDGTCNIGQFYECLNMAALWKLPILFVVENNK 230 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G +RA++ ++ +F + G +VDGMD+ AV+A +A+ RA +GP ++E Sbjct: 231 WAIGMDHNRATSDPEIWRKAAAFGMAGEEVDGMDVLAVRAAAQRAIERARAGEGPTLLEC 290 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYRYRGHS++DP R E E + DPI+++ L+ A+ +LK I+ + Sbjct: 291 LTYRYRGHSLADPDELRAEAE-KEFWAKRDPIKRLAASLVEQGLATADELKAIDKEIDAE 349 Query: 340 INNSVEFAQSDKEPDPAEL 358 I + V FA EPDPAEL Sbjct: 350 IADCVSFALEAPEPDPAEL 368 >gi|37522413|ref|NP_925790.1| pyruvate dehydrogenase E1 alpha-subunit [Gloeobacter violaceus PCC 7421] gi|35213414|dbj|BAC90785.1| pyruvate dehydrogenase E1 alpha-subunit [Gloeobacter violaceus PCC 7421] Length = 331 Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 132/312 (42%), Positives = 188/312 (60%), Gaps = 1/312 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + + L+ YR M+L R FE+ Q+Y G + GF HL GQEAV G+ +L D + + Sbjct: 13 ERSEALALYRDMVLGRTFEDTCAQMYYRGKLFGFVHLYNGQEAVSTGIIKALRPDDYVTS 72 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A +MAEL G+ G SKG+GGSMH+FS ++ F GG +G + + Sbjct: 73 TYRDHVHALSKGVSARSVMAELFGKATGCSKGRGGSMHLFSAEHNFLGGFAFIGEGIPIA 132 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G AF KY+ +D++ FGDG N GQ +E N+AALW L +++V+ENN +++G Sbjct: 133 CGAAFTAKYQGTDRVSASFFGDGTTNNGQFFECLNMAALWKLPILFVVENNLWSIGMYHP 192 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RAS+ K+ +F IPG++VDGMD+ AV+A +AV R GP +IE TYR+RGH Sbjct: 193 RASSVVEIYKKADAFGIPGVRVDGMDVLAVRAVAKEAVERARTGGGPTLIECTTYRFRGH 252 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 S++DP R E R DP+ ++R L AS DLK IE VR ++++V+FA Sbjct: 253 SLADPDELRDPAEKAHWR-KQDPLPRLRVWLEEQGLASVEDLKRIEQEVRAEVDDAVQFA 311 Query: 348 QSDKEPDPAELY 359 + EP ELY Sbjct: 312 EDSPEPPLDELY 323 >gi|307128737|ref|YP_003880767.1| pyruvate dehydrogenase E1 component subunit alpha [Candidatus Sulcia muelleri CARI] gi|306483199|gb|ADM90069.1| pyruvate dehydrogenase E1 component, alpha subunit [Candidatus Sulcia muelleri CARI] Length = 324 Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 139/319 (43%), Positives = 195/319 (61%), Gaps = 4/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM--KMSLTE 101 + + N + L ++ M R+FE+K LY + GF HL GQEA+ G+ M L + Sbjct: 1 MKKINNDIYLKWFKDMSFWRKFEDKCRSLYLKQKIRGFLHLYNGQEAIPAGIVHAMDLNK 60 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D+MITAYR H +A GVD IMAEL G+ G S G GGSMH+FS K FYGGHGIVG Sbjct: 61 -DKMITAYRCHILPIAMGVDPKNIMAELLGKNTGTSYGMGGSMHIFSKKYRFYGGHGIVG 119 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ LG GIAFA+KY D + + GDGA NQG ++E+FN+A +W L V+++ ENN+YA Sbjct: 120 GQIPLGAGIAFADKYFSRDAVTLTIMGDGAVNQGSLHETFNMAMIWKLPVVFICENNKYA 179 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV R+S K G S+ +P VDGM+ + A++ R GP +++ T Sbjct: 180 MGTSVKRSSNIKEIYKIGFSYKMPSFCVDGMNPIKIYEHAYNAISRARNGNGPTFLDIRT 239 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSD +YR+++E+NE + N DPI ++K +L K +E L + + K I+ Sbjct: 240 YRYRGHSMSDSESYRSKKEVNEYK-NRDPILLIKKYILEKKLVTEKKLNSFKDEINKKID 298 Query: 342 NSVEFAQSDKEPDPAELYS 360 V+FA+ + ++YS Sbjct: 299 ECVQFAELSNYTNVKKMYS 317 >gi|146169265|ref|XP_001017076.2| pyruvate dehydrogenase E1 component [Tetrahymena thermophila] gi|146145096|gb|EAR96831.2| pyruvate dehydrogenase E1 component [Tetrahymena thermophila SB210] Length = 429 Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 152/343 (44%), Positives = 209/343 (60%), Gaps = 7/343 (2%) Query: 26 AATSSVDCVDIPFLEGFEV---SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 + T +++ L+GF++ S KE+ L Y+ M ++R+ E +LY + GFC Sbjct: 67 SVTINLEGYQTKMLDGFKLPTQSTATKEELLKLYKDMNVMRKIELACDKLYKQREIRGFC 126 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL GQEAVI G++ + D +ITAYR H H G +I+AEL GR+ G + GKGG Sbjct: 127 HLYDGQEAVISGIEAACNLEDAIITAYRCHCHAYTRGDTPHQIIAELMGRKTGSTGGKGG 186 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMH + K FYGGHGIVGAQV +G G+AFA KY + + + +GDGAANQGQ+ E+ N Sbjct: 187 SMHFYRKKTHFYGGHGIVGAQVPMGAGLAFALKYEKKPNVSITMYGDGAANQGQIAEAAN 246 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A LWNL ++V ENN Y MGTS +RAS T+F RG IPG+++DG + VK Sbjct: 247 MAGLWNLPCLFVCENNLYGMGTSTARASHNTDFYTRGDK--IPGIRMDGNNYFHVKEGFK 304 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHN 321 A Y H GP+ IE+ TYRY GHSMSD YRT+EEI E R D I+ + +L N Sbjct: 305 FAKQYALEH-GPLFIELRTYRYHGHSMSDSGTTYRTQEEIKEFRQKKDCIQFIANTILQN 363 Query: 322 KWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 +A++ L+ I+ R+I++ +VE A D PD EL +D+ I Sbjct: 364 NFATQEQLEAIQDETREIVDKAVEQALKDPLPDDHELCTDVYI 406 >gi|156741990|ref|YP_001432119.1| pyruvate dehydrogenase [Roseiflexus castenholzii DSM 13941] gi|156233318|gb|ABU58101.1| Pyruvate dehydrogenase (acetyl-transferring) [Roseiflexus castenholzii DSM 13941] Length = 353 Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 129/301 (42%), Positives = 185/301 (61%), Gaps = 1/301 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 ++ YR M+LIRRFEEK ++Y +GGF HL IG+EA VG +L D + T YR+H Sbjct: 30 INYYRQMVLIRRFEEKCQEMYTKARIGGFLHLYIGEEATAVGAISALRPEDHIFTHYRDH 89 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH +A G+D + +MAEL G+ G SKG GGSMH F+GG+ IVG+ + L G+A Sbjct: 90 GHAIARGLDINALMAELFGKVTGCSKGLGGSMHFADASKNFWGGYAIVGSHLPLAVGVAL 149 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 K +R D + +V FGDGA N G+ YES N A LW L VI+V ENN YAMGT + S+ Sbjct: 150 GMKMQRRDSVVMVFFGDGATNGGEFYESLNFAQLWKLPVIFVCENNLYAMGTPLEVHSSV 209 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T ++ +F++ +VDG D+ ++ +AV Y R+ +GP+++E +TYR+RGHS D Sbjct: 210 TEIYRKACAFDMKAERVDGNDVLVMRDAALRAVEYARSGRGPVLLEAMTYRFRGHSAQDT 269 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR++E+I R N DPI + R L+ A+E L++I+ + + +V FA E Sbjct: 270 QKYRSKEDIERHRRN-DPIARFRAMLVQEGIATEQQLRDIDRMIDDQVEAAVRFADESPE 328 Query: 353 P 353 P Sbjct: 329 P 329 >gi|171916015|ref|ZP_02931485.1| dehydrogenase E1 component [Verrucomicrobium spinosum DSM 4136] Length = 358 Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 147/343 (42%), Positives = 206/343 (60%), Gaps = 12/343 (3%) Query: 25 RAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 + AT+ + D P + EQ++ Y + IRRFE+ A + Y G +GGF HL Sbjct: 3 KTATAPLKYADAPI-----NASMTAEQKIKLYTDICRIRRFEQIALKFYNAGKMGGFLHL 57 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 IGQE+V G + E D MITAYR+HGH LA G+ ++ MAEL G++ G SKGKGGSM Sbjct: 58 YIGQESVAAGCASLMGENDHMITAYRDHGHALAVGMGMNECMAELYGKKTGCSKGKGGSM 117 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 H F+ ++GGHGIVG Q LGTG+AF KY+ + GDGA NQG +E+ N+A Sbjct: 118 HYFAPDKNYWGGHGIVGGQTPLGTGLAFGLKYKGLTGCAMAFLGDGAVNQGAFHEALNLA 177 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTN-FSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 AL+ L VI++IENN Y+MGTS R+SA + ++R V++++ Q +G DI V+A + Sbjct: 178 ALFELPVIFIIENNGYSMGTSQKRSSAYPSCLAERAVAYDMAWEQFNGEDIYEVRAKVQT 237 Query: 264 AVAYCRAHK--GPIIIEMLTYRYRGHSMSDPAN--YRTREEINEMRSNHDPIEQVRKRLL 319 A+ RAHK P ++E+ TYRY GHS++D + YRT+EEI HDPI R L+ Sbjct: 238 AIE--RAHKQSKPTLLEVATYRYTGHSVADANHKKYRTKEEIERYEKEHDPINIWRGHLV 295 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +E KEI+ K + +FA S PDP+E++ D+ Sbjct: 296 REGVLTEAQAKEIDQAAFKEAEAAADFADSSPYPDPSEIFDDV 338 >gi|183220946|ref|YP_001838942.1| pyruvate dehydrogenase E1 subunit alpha [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|167779368|gb|ABZ97666.1| Pyruvate dehydrogenase E1 alpha subunit [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 322 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 133/304 (43%), Positives = 193/304 (63%), Gaps = 8/304 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+LIR+FEE A + Y +G +GGF HL IGQEAV VG +LT D +++ YR+HGH Sbjct: 19 YRQMVLIRKFEEAAAKAYSVGKIGGFLHLYIGQEAVGVGSIAALTPHDYIVSTYRDHGHA 78 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G+ + +MAEL G+ GISKG GGSMH F F GGH +SL GIAFA+K Sbjct: 79 LARGLHPNPLMAELFGKATGISKGNGGSMHFFDKNAHFMGGH------ISLAAGIAFASK 132 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y++ D + + FG+GAAN G +E N+AA+W L V+++ ENN YAMGT RA A + Sbjct: 133 YKKEDSVTICFFGEGAANIGSFHEGLNLAAIWKLPVVFICENNHYAMGTPEYRALAVKDV 192 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 S R ++++ ++G ++R V+ + AV R +GP +IE+ TYR+RGHSMSDPA Y Sbjct: 193 SIRAHAYDMARDHIEGDEVRKVRDHVKVAVERARRGEGPTLIEVSTYRFRGHSMSDPAKY 252 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RT+EE+ E DP+ + R L +L ++E +++ I+ + +FA++ EP Sbjct: 253 RTKEEL-EAYKKKDPLMRARHE-LELGGIKPNELDKLETDIQTQIDEAYQFAETSPEPPL 310 Query: 356 AELY 359 ++L+ Sbjct: 311 SQLH 314 >gi|72382694|ref|YP_292049.1| pyruvate dehydrogenase E1 subunit alpha [Prochlorococcus marinus str. NATL2A] gi|72002544|gb|AAZ58346.1| pyruvate dehydrogenase (lipoamide) [Prochlorococcus marinus str. NATL2A] Length = 364 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 128/321 (39%), Positives = 205/321 (63%), Gaps = 8/321 (2%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGD 103 ++ N+E L+ ++ M L RRFE+K ++Y G + GF HL GQEA+ G+ ++ + D Sbjct: 37 AQINREIGLNLFKDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAISTGVIGAMKRKHD 96 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG+ +G Sbjct: 97 WFCSTYRDHVHALSAGVPAKEVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGYAFIGEG 156 Query: 164 VSLGTGIAFANKYRR------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + + G AF++KY+R SD + FGDG N GQ YE N+A LW L +I+V+EN Sbjct: 157 IPVALGAAFSSKYKREALKENSDSVTAAFFGDGTCNIGQFYECLNMAQLWKLPIIFVVEN 216 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G + RA+++T ++ +F +PG ++DGMD+ AV+ ++A+ RA +GP +I Sbjct: 217 NKWAIGMAHDRATSETEIWRKASAFGMPGEEIDGMDVLAVRGAAERALERARAGEGPTLI 276 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP R+ E E + DPI++++ L + + +LK IE + Sbjct: 277 ECLTYRFRGHSLADPDELRSERE-KEFWAKRDPIKKLKNDLTSSGLVFDEELKNIEKEID 335 Query: 338 KIINNSVEFAQSDKEPDPAEL 358 +N++VEFA + EPDP+EL Sbjct: 336 LEVNDAVEFALNAPEPDPSEL 356 >gi|157867987|ref|XP_001682547.1| pyruvate dehydrogenase E1 component alpha subunit [Leishmania major strain Friedlin] gi|68126001|emb|CAJ04196.1| putative pyruvate dehydrogenase E1 component alpha subunit [Leishmania major strain Friedlin] Length = 378 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 156/354 (44%), Positives = 215/354 (60%), Gaps = 11/354 (3%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 + L P K D +P + ++ EQ + LM IRR E Q Y Sbjct: 15 VPLKPQRPFKLHTAGRTDMAPLP-----TQAVYDAEQLKQSLALMFRIRRMESLCDQSYK 69 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 + + GFCHL IGQEA+ GM+ LT D +IT YR+HG ++ G + AE+ GRQG Sbjct: 70 LKKIRGFCHLYIGQEAIPAGMENVLTFEDPIITGYRDHGWYISRGGKPEDVFAEMFGRQG 129 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA--FANKYRRSDK-ICVVCFGDGA 191 G SKGKGGSMHM+ NGFYGG+GIVGAQVS+G G+A FA + R S K + V +GDGA Sbjct: 130 GCSKGKGGSMHMYRVDNGFYGGNGIVGAQVSIGAGLAWRFAMENRDSPKHVAVTFYGDGA 189 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 ANQGQ+YES NIAAL L VI+ +ENN + MGTS +R S Q F +RG IPG++VDG Sbjct: 190 ANQGQIYESMNIAALQRLPVIFAVENNHFGMGTSAARGSYQAEFYRRGDY--IPGIKVDG 247 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDP 310 MD+ AV+ A YC + KGPI++E+ YRY GHSMSDP N YRT+ +I ++ D Sbjct: 248 MDVLAVQEGTRYARDYCMSGKGPIVMELDCYRYMGHSMSDPDNQYRTKSDIQHVKQERDC 307 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 I ++R+ + +E ++ ++E +V+K ++ ++ AQ EL++DI + Sbjct: 308 IRKMREFMATEGIMTEDEMSKMEKDVKKEVDQDLQKAQKQPMTKLDELFTDIYV 361 >gi|228471642|ref|ZP_04056416.1| pyruvate dehydrogenase E1 component, alpha subunit [Capnocytophaga gingivalis ATCC 33624] gi|228277061|gb|EEK15747.1| pyruvate dehydrogenase E1 component, alpha subunit [Capnocytophaga gingivalis ATCC 33624] Length = 332 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 134/318 (42%), Positives = 195/318 (61%), Gaps = 2/318 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG-MKMSLTEG 102 + + +K+ L Y ML R+FE+K Y V GF HL GQEA++ G M + + Sbjct: 1 MKKIDKKTYLQWYEEMLFWRKFEDKLASAYIQQKVRGFLHLYNGQEAIVAGCMHVIDPKK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H H +A GVD +IMAEL G+ G S G GGSMH+FS ++ F+GGHGIVG Sbjct: 61 DKMITAYRNHVHPIALGVDPRRIMAELFGKGTGTSHGLGGSMHIFSKEHNFFGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q++LG G+AFA KY + + + GDGA QG ++E+FN+A W L V+++ ENN YAM Sbjct: 121 QIALGAGLAFAEKYNETGGVVLTFMGDGATRQGTLHETFNMAMNWKLPVVFICENNHYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R + + K G+ + +P VDGM+ +V + +AV R GP +++ TY Sbjct: 181 GTSVERTANHPDIWKLGLGYEMPCEPVDGMNPVSVAEKVYEAVERARRGDGPTFLDIRTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YRT+EE+ E + DPI QV + K+A++ +++ I+ V+ ++ Sbjct: 241 RYRGHSMSDAQHYRTKEEVEEYKKI-DPITQVLDVIKAKKYATDAEIEAIDERVKDLVAE 299 Query: 343 SVEFAQSDKEPDPAELYS 360 +FA P+ +Y Sbjct: 300 CEKFANESPFPEKNVMYD 317 >gi|254445836|ref|ZP_05059312.1| pyruvate dehydrogenase E1 component, alpha subunit [Verrucomicrobiae bacterium DG1235] gi|198260144|gb|EDY84452.1| pyruvate dehydrogenase E1 component, alpha subunit [Verrucomicrobiae bacterium DG1235] Length = 369 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 134/321 (41%), Positives = 202/321 (62%), Gaps = 4/321 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +K++ + YR M+ IRRFEE++ ++Y G +GGF HL IGQE++ VG + D M Sbjct: 29 DLSKDELIHFYREMVRIRRFEERSLRVYQQGKIGGFLHLYIGQESIAVGCASLMGAHDHM 88 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HGH LA G++ ++ MAEL G+ G SKGKGGSMH F+ ++GGHGIVG Q+ Sbjct: 89 ITAYRNHGHGLAVGMNMNECMAELLGKATGCSKGKGGSMHYFAPDKNYWGGHGIVGGQIP 148 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+A+ KY+ + GDGA NQG V+E++NIAALW+L I++IENN Y+MGTS Sbjct: 149 LGVGLAYGVKYKEQKGSAMAFMGDGAINQGAVHEAYNIAALWDLPAIFIIENNGYSMGTS 208 Query: 226 VSRASAQTN--FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 R+S+ + R +N+ ++G + A++ + +A+ P I+E+ TYR Sbjct: 209 QERSSSHPKEGLAARAEGYNMAWENINGESLFAIREGVGRAIKRAHEESKPTILEIHTYR 268 Query: 284 YRGHSMSD--PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 Y+GHS++D YRT+EEI++ R NHDP+ R LL +K SE ++K I+ +K Sbjct: 269 YQGHSVADANAKKYRTKEEIDDYRKNHDPLNVYRLYLLDSKIMSEEEMKVIDDAAKKEAE 328 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 ++ +FA P+ + + D+ Sbjct: 329 DAAKFADESPFPEASSITEDV 349 >gi|124026413|ref|YP_001015528.1| pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. NATL1A] gi|123961481|gb|ABM76264.1| Pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. NATL1A] Length = 364 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 128/321 (39%), Positives = 206/321 (64%), Gaps = 8/321 (2%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGD 103 ++ N+E L+ ++ M L RRFE+K ++Y G + GF HL GQEA+ G+ ++ + D Sbjct: 37 AQINREIGLNLFKDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAISTGVIGAMKRKHD 96 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG+ +G Sbjct: 97 WFCSTYRDHVHALSAGVPAKEVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGYAFIGEG 156 Query: 164 VSLGTGIAFANKYRR------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + + G AF++KY+R SD + FGDG N GQ YE N+A LW L +I+V+EN Sbjct: 157 IPVALGAAFSSKYKREALKESSDSVTAAFFGDGTCNIGQFYECLNMAQLWKLPIIFVVEN 216 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G + RA+++T ++ +F + G ++DGMD+ AV+ ++A+ RA +GP +I Sbjct: 217 NKWAIGMAHDRATSETEIWRKASAFGMHGEEIDGMDVLAVRGAAERALERARAGEGPTLI 276 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP R+ +E E + DPI++++ L + S+ +LK IE + Sbjct: 277 ECLTYRFRGHSLADPDELRSEKE-KEFWAKRDPIKKLKNDLTSSGLVSDEELKNIEKEID 335 Query: 338 KIINNSVEFAQSDKEPDPAEL 358 +N++VEFA + EPDP+EL Sbjct: 336 LEVNDAVEFALNAPEPDPSEL 356 >gi|167523575|ref|XP_001746124.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775395|gb|EDQ89019.1| predicted protein [Monosiga brevicollis MX1] Length = 491 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 135/275 (49%), Positives = 178/275 (64%), Gaps = 6/275 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KE Y+ IRR E +AG+ Y + GFCHL GQEAV VGM D + Sbjct: 187 ELTKEDAFKYYKDAATIRRMETRAGESYRNKQIRGFCHLYSGQEAVCVGMTAGFRPEDSI 246 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG G I+AEL G G SKGKGGSMH++ K F+GG+GIVGAQV Sbjct: 247 ITAYRCHGWAYMWGWSVKSILAELYGNSAGASKGKGGSMHIYGEK--FFGGNGIVGAQVP 304 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+A A++Y + + + +GDGA+NQGQV+E++NIA LW L V++V ENN+Y MGTS Sbjct: 305 VGAGVALAHQYLKDNGVNFAFYGDGASNQGQVFEAYNIAKLWKLPVVFVCENNKYGMGTS 364 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R+SA T + RG IPG+ VDG D+ AV+ A Y R + GP+++EM TYRY Sbjct: 365 VQRSSASTLYYTRGD--YIPGLLVDGQDLLAVREATRWATDYAREN-GPLVLEMETYRYS 421 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 GHSMSDP YRTR++I +MR++ DPI ++ R++ Sbjct: 422 GHSMSDPDTTYRTRDDIKKMRTDFDPITMMKHRMI 456 >gi|163847532|ref|YP_001635576.1| pyruvate dehydrogenase E1 component subunit alpha [Chloroflexus aurantiacus J-10-fl] gi|222525382|ref|YP_002569853.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Chloroflexus sp. Y-400-fl] gi|163668821|gb|ABY35187.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Chloroflexus aurantiacus J-10-fl] gi|222449261|gb|ACM53527.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Chloroflexus sp. Y-400-fl] Length = 357 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 129/304 (42%), Positives = 184/304 (60%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y MLL+RRFEE+AG++Y +GG+CHL +G+EA IVG+ +LT D + T YREHG+I Sbjct: 24 YYQMLLLRRFEERAGEMYVKAKIGGYCHLNLGEEATIVGLMAALTPDDYIFTNYREHGYI 83 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A GV +MAEL G++ G+S G+GGSMH+F K F GG+ IVG QV L G A+A + Sbjct: 84 IARGVPPGPVMAELFGKETGVSGGRGGSMHLFDRKTNFMGGYAIVGGQVPLAVGAAYALR 143 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y+ + V GDG N G YES N+A LW V++ I NN Y MGTSV S++ + Sbjct: 144 YQNKPGVVVAQMGDGTTNIGAFYESLNLAKLWKCPVLFFIVNNGYGMGTSVEAGSSEPDL 203 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 K+G SF I G +VDG D+ AV+ + + A A P II+ +++R+RGHS+ D Y Sbjct: 204 WKKGASFRIHGERVDGTDVLAVRDVVRRLRARAEAEGEPAIIDAVSFRFRGHSVIDSDRY 263 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R E + R +DPI + LL + + LK I V + + +++FA + +P Sbjct: 264 RDPEAVRRGRELYDPIRKFATLLLDHGVVDDAWLKGIAEQVEREVQEAIDFANNSPDPKF 323 Query: 356 AELY 359 +LY Sbjct: 324 EDLY 327 >gi|296169085|ref|ZP_06850744.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896205|gb|EFG75867.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 325 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 126/305 (41%), Positives = 181/305 (59%), Gaps = 1/305 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ +RR EEK +LY + GF HL +G+EAV G +L + D ++ YREH H L Sbjct: 14 MVRVRRMEEKCAELYSAAKIRGFLHLYVGEEAVAAGSLRALADDDAVVATYREHAHALLR 73 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ + IMAE+ G+Q G S+G+GGSMH+F FYGG+ IV + L GIA A+ + Sbjct: 74 GIPMTSIMAEMFGKQEGCSRGRGGSMHLFDAAKRFYGGNAIVAGGLPLAVGIALADAMLQ 133 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ FGDGA +G +ES N+AALWNL V++ ENN YAMGT++ RA +QT+ + + Sbjct: 134 QKRVTACYFGDGAVAEGAFHESLNMAALWNLPVLFCCENNLYAMGTALDRAQSQTDLTVK 193 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 ++ +P + VDGMD+ A A + V + R GP IE TYR+R HSM DP YR + Sbjct: 194 AAAYRVPTLAVDGMDVEACHAAAQEGVDHVRDTGGPFFIEFRTYRFRAHSMFDPELYRDK 253 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +E+ R DPI+ + L + SE D++EIE I +V FA++ D A+L Sbjct: 254 DEVQRWR-ERDPIQAFTDKCLSDGTLSEADVREIEDAAATEIEGAVAFAEAGTWEDVADL 312 Query: 359 YSDIL 363 D+L Sbjct: 313 ERDVL 317 >gi|326335614|ref|ZP_08201801.1| acetoin dehydrogenase E1 component subunit alpha [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692380|gb|EGD34332.1| acetoin dehydrogenase E1 component subunit alpha [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 334 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 134/318 (42%), Positives = 194/318 (61%), Gaps = 2/318 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG-MKMSLTEG 102 + + +K+ L Y ML R+FE+K Y V GF HL GQEA++ G M + + Sbjct: 3 MKKIDKKTYLQWYEEMLFWRKFEDKLASAYIQQKVRGFLHLYNGQEAIVAGCMHVIDPKK 62 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H H +A GVD +IMAEL G+ G S G GGSMH+FS ++ F+GGHGIVG Sbjct: 63 DKMITAYRNHVHPIALGVDPRRIMAELFGKDTGTSHGLGGSMHIFSKEHNFFGGHGIVGG 122 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q++LG G+AFA KY + + + GDGA QG ++E+FN+A W L V+++ ENN YAM Sbjct: 123 QIALGAGMAFAEKYNETGGVVLTFMGDGATRQGVLHETFNMAMNWKLPVVFICENNHYAM 182 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R + K G+ + +P +VDGM+ V + +AV R GP +++ TY Sbjct: 183 GTSVERTANHPEIWKLGLGYEMPCEKVDGMNPVPVAEKVFEAVERARRGDGPTFLDIRTY 242 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YRT+EE+ E + DPI QV + K+A++ ++ I+ V+ ++ Sbjct: 243 RYRGHSMSDAQHYRTKEEVEEYKKI-DPITQVLDVIKAKKYATDDEIAAIDERVKNLVAE 301 Query: 343 SVEFAQSDKEPDPAELYS 360 +FA+ P+ +Y Sbjct: 302 CEKFAEESPFPEKNVMYD 319 >gi|11465733|ref|NP_053877.1| pyruvate dehydrogenase E1 component alpha subunit [Porphyra purpurea] gi|1709450|sp|P51267|ODPA_PORPU RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|1276733|gb|AAC08153.1| pyruvate dehydrogenase E1 component, alpha subunit [Porphyra purpurea] Length = 344 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 202/332 (60%), Gaps = 9/332 (2%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 V++P +++ K + L Y MLL R FE+ Q+Y G + GF HL GQEAV Sbjct: 7 VELPLTNCNQIN-LTKHKLLVLYEDMLLGRNFEDMCAQMYYKGKMFGFVHLYNGQEAVST 65 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G+ L D + + YR+H H L+ GV + +MAEL G++ G S+G+GGSMH+FS + F Sbjct: 66 GVIKLLDSKDYVCSTYRDHVHALSKGVPSQNVMAELFGKETGCSRGRGGSMHIFSAPHNF 125 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSD-------KICVVCFGDGAANQGQVYESFNIAAL 206 GG + + + TG AF + YR+ ++ FGDG N GQ +E N+A L Sbjct: 126 LGGFAFIAEGIPVATGAAFQSIYRQQVLKEPGELRVTACFFGDGTTNNGQFFECLNMAVL 185 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 W L +I+V+ENNQ+A+G + R+S+ K+ +F +PG++VDGMD+ AV+ +KAV Sbjct: 186 WKLPIIFVVENNQWAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQVAEKAVE 245 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASE 326 R +GP +IE LTYR+RGHS++DP R+R+E E DPI++++K +L N+ AS Sbjct: 246 RARQGQGPTLIEALTYRFRGHSLADPDELRSRQE-KEAWVARDPIKKLKKHILDNQIASS 304 Query: 327 GDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +L +I+ +V+ + SVEFA S EP+ +EL Sbjct: 305 DELNDIQSSVKIDLEQSVEFAMSSPEPNISEL 336 >gi|71748840|ref|XP_823475.1| pyruvate dehydrogenase E1 component subunit alpha [Trypanosoma brucei] gi|70833143|gb|EAN78647.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Trypanosoma brucei] gi|261333438|emb|CBH16433.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Trypanosoma brucei gambiense DAL972] Length = 378 Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 153/359 (42%), Positives = 216/359 (60%), Gaps = 11/359 (3%) Query: 8 VTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEE 67 V +G + LNP V K D IP +E + + +M+ IRR E Sbjct: 8 VFLGAKTVPLNPHVPFKLHTAGRDDLPPIPTTATYEPEKIKEN-----LAMMIRIRRVEA 62 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 A Q Y + + GFCHLCIGQEA+ VGM+ L+ GD ++T YR+HG + G ++ A Sbjct: 63 LADQSYKLKKIRGFCHLCIGQEAIPVGMENVLSRGDPVVTGYRDHGLFMTRGGTIEELFA 122 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICV 184 EL GR+GG SKGKGGSMHM+ K FYGG+GIVGAQ LG G+A+ DK + V Sbjct: 123 ELFGREGGCSKGKGGSMHMYRVKENFYGGNGIVGAQAPLGAGLAWRYALENRDKPSNVAV 182 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 +GDGAANQGQV+E+ NIAAL + VI+ ENN Y MGT RA+ Q +RG I Sbjct: 183 TFYGDGAANQGQVFEAMNIAALQRIPVIFCCENNHYGMGTREDRAAYQPQMYRRGDY--I 240 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINE 303 PG++VDGMD+ AV+ A +C A KGP+++EM +YRY GHSMSDP + YRT+ +I E Sbjct: 241 PGLRVDGMDVLAVQEGTRWAKEWCLAGKGPVVLEMDSYRYMGHSMSDPDSQYRTKNDIQE 300 Query: 304 MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +R D IE++++ ++ + ++K++E +V+K ++ + A+ EL++DI Sbjct: 301 VRRTRDCIEKMKEFVVSEGIMTVEEIKQMEKDVKKEVDKELPPAEKQAITPLKELFTDI 359 >gi|322490383|emb|CBZ25643.1| putative pyruvate dehydrogenase E1 component alpha subunit [Leishmania mexicana MHOM/GT/2001/U1103] Length = 378 Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 152/354 (42%), Positives = 216/354 (61%), Gaps = 11/354 (3%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 ++L P K D +P ++ + K + LM IRR E Q Y Sbjct: 15 VSLKPQRPFKLHTAGRTDMAPLPTQAAYDTEQLKK-----SLALMFRIRRMESLCDQSYK 69 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 + + GFCHL IGQEA+ GM+ L+ D ++T YR+HG ++ G + AE+ GRQG Sbjct: 70 LKKIRGFCHLYIGQEAIPAGMENVLSFEDPIVTGYRDHGWYISRGGKPEDVFAEMFGRQG 129 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA--FANKYRRSDK-ICVVCFGDGA 191 G SKGKGGSMHM+ NGFYGG+GIVGAQVS+G G+A FA + R S K + V +GDGA Sbjct: 130 GCSKGKGGSMHMYKVGNGFYGGNGIVGAQVSIGAGLAWRFAMENRDSPKHVAVTFYGDGA 189 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 ANQGQ+YES NIAAL L VI+ +ENN + MGTS +R S Q+ F +RG IPG++VDG Sbjct: 190 ANQGQIYESMNIAALQRLPVIFAVENNHFGMGTSAARGSYQSEFYRRGDY--IPGIKVDG 247 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDP 310 MD+ AV+ A +C + KGPI++E+ YRY GHSMSDP N YRT+ +I ++ D Sbjct: 248 MDVLAVQEGTRYARDHCMSGKGPIVMELDCYRYMGHSMSDPDNQYRTKNDIQHVKQERDC 307 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 I ++R+ + +E ++ ++E +V+K ++ ++ AQ EL++DI + Sbjct: 308 IRKMRELMATEGIMTEDEMNKLEKDVKKEVDQDLQKAQKQAMTKLDELFTDIYV 361 >gi|146084177|ref|XP_001464949.1| pyruvate dehydrogenase E1 component alpha subunit [Leishmania infantum JPCM5] gi|134069044|emb|CAM67190.1| putative pyruvate dehydrogenase E1 component alpha subunit [Leishmania infantum JPCM5] gi|322498369|emb|CBZ33443.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 378 Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 153/354 (43%), Positives = 214/354 (60%), Gaps = 11/354 (3%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 + L P K D +P ++ + K + LM IRR E Q Y Sbjct: 15 VPLKPQRPFKLHTAGRTDMAPLPTQAAYDAEQLKK-----SLALMFRIRRMESLCDQSYK 69 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 + + GFCHL IGQEA+ GM+ LT D ++T YR+HG ++ G + AE+ GRQG Sbjct: 70 LKKIRGFCHLYIGQEAIPAGMENVLTFEDPIVTGYRDHGWYISRGGKPEDVFAEMFGRQG 129 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA--FANKYRRSDK-ICVVCFGDGA 191 G SKGKGGSMHM+ NGFYGG+GIVGAQVS+G G+A FA + R S K + V +GDGA Sbjct: 130 GCSKGKGGSMHMYKVGNGFYGGNGIVGAQVSIGAGLAWRFAMENRDSPKHVAVTFYGDGA 189 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 ANQGQ+YES NIAAL L VI+ +ENN + MGTS +R S Q F +RG IPG++VDG Sbjct: 190 ANQGQIYESMNIAALQRLPVIFAVENNHFGMGTSAARGSYQAEFYRRGDY--IPGIKVDG 247 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDP 310 MD+ AV+ A +C + KGPI++E+ YRY GHSMSDP N YRT+ +I ++ D Sbjct: 248 MDVLAVQEGTRYARDHCMSGKGPIVMELDCYRYMGHSMSDPDNQYRTKSDIQHVKQERDC 307 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 I ++R+ + +E ++ ++E +V+K ++ ++ AQ EL++DI + Sbjct: 308 IRKMREFMATEGIMTEDEMSKMEKDVKKEVDQDLQKAQKQPMTKLDELFTDIYV 361 >gi|86607798|ref|YP_476560.1| dehydrogenase E1 component, alpha subunit [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556340|gb|ABD01297.1| dehydrogenase E1 component, alpha subunit [Synechococcus sp. JA-2-3B'a(2-13)] Length = 333 Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 131/304 (43%), Positives = 191/304 (62%), Gaps = 1/304 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M+L R FE+K ++Y G + GF HL GQEAV G+ +L D + + YR+H H Sbjct: 23 YEDMVLGRLFEDKCAEMYYKGKMFGFVHLYNGQEAVSTGVIKALKPTDYVCSTYRDHVHA 82 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L+ G+ +MAEL G+ G SKG+GGSMH+FS ++ F GG+ V + + TG AF+ K Sbjct: 83 LSTGIPPRAVMAELFGKATGCSKGRGGSMHLFSAEHNFLGGYAFVAEGIPVATGAAFSAK 142 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 YR +D++ FGDGA N GQ YE N+AALW L +IYV+ENN +A+G + RA++ T+ Sbjct: 143 YRGTDQVTACFFGDGACNNGQFYECLNMAALWKLPIIYVVENNFWAIGMAHERATSDTDI 202 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 ++G +F +PG QVDGMD+ AV+ +A+A RA +GP ++E +TYR+RGHS++DP Sbjct: 203 YRKGPAFGMPGYQVDGMDVLAVREAAQQAIARARAGEGPTLLECITYRFRGHSLADPDEL 262 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R+ EE E DPI+Q+ + L + +E D + I V +I ++V FA EP Sbjct: 263 RSPEE-KEFWRQRDPIKQLERYALEHNLMTEADFQAIHAEVSAVIEDAVLFALESPEPTL 321 Query: 356 AELY 359 EL+ Sbjct: 322 DELH 325 >gi|16331186|ref|NP_441914.1| pyruvate dehydrogenase E1 component, alpha subunit [Synechocystis sp. PCC 6803] gi|1653680|dbj|BAA18592.1| pyruvate dehydrogenase E1 component, alpha subunit [Synechocystis sp. PCC 6803] Length = 342 Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 132/331 (39%), Positives = 207/331 (62%), Gaps = 10/331 (3%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 +P L E+S ++E L Y M+L R FE+K ++Y G + GF HL GQEAV G+ Sbjct: 7 LPELNTAEIS-LDRETALVLYEDMVLGRFFEDKCAEMYYRGKMFGFVHLYNGQEAVSSGI 65 Query: 96 -KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 K + D + + YR+H H L+ GV A ++MAEL G++ G S+G+GGSMH+FS+ + Sbjct: 66 IKAMRQDEDYVCSTYRDHVHALSAGVPAREVMAELFGKETGCSRGRGGSMHLFSSAHNLL 125 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALW 207 GG +G + + G AF KYRR D++ FGDG +N GQ +E N+AALW Sbjct: 126 GGFAFIGEGIPVALGAAFQTKYRREVLKDDGYDQVTACFFGDGTSNNGQFFECLNMAALW 185 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 L +++V+ENN++A+G + RA++Q K+ FN+ G++VDGMD+ A+ +AVA Sbjct: 186 KLPILFVVENNKWAIGMAHERATSQPEIYKKASVFNMVGVEVDGMDVVAMHKVATEAVAR 245 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 RA +GP +IE LTYR+RGHS++DP R+ EE + + DPI++ + ++ AS Sbjct: 246 ARAGEGPTLIEALTYRFRGHSLADPDELRSAEE-KQFWAARDPIKKFAAFMTEHELASNE 304 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +LK I+ ++++I++++ FA+S EP+P +L Sbjct: 305 ELKAIDKRIQEVIDDALAFAESSPEPNPEDL 335 >gi|298245489|ref|ZP_06969295.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Ktedonobacter racemifer DSM 44963] gi|297552970|gb|EFH86835.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Ktedonobacter racemifer DSM 44963] Length = 351 Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 130/315 (41%), Positives = 186/315 (59%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +K+ L Y M+LIRRFEEK+G++Y +GG+CHL +G+EA +VG L D + Sbjct: 29 DKDTLLKYYYEMVLIRRFEEKSGEMYNKARIGGYCHLNLGEEATVVGFCHGLGPEDYIYA 88 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YREHG+ L+ G+ A +MAEL G+ GI+KG+GGSMH+F + F GG+GIVG QV L Sbjct: 89 NYREHGYALSRGISAKAVMAELFGKSTGITKGRGGSMHLFDINSRFMGGYGIVGGQVPLA 148 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A+A KYR ++ GDGA N G YES N+A ++ L VI+ I NNQY MGT V Sbjct: 149 VGAAYAIKYREGKEVVACQMGDGATNGGPFYESLNLAKIYQLPVIFFIVNNQYGMGTRVE 208 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 SA ++G +F++ ++VDG D+ AV+ M AV R P +IE +++R+RGH Sbjct: 209 AGSAVAELHRKGNAFDMNNIRVDGNDVLAVRDAMRSAVKLAREKSEPTLIEAVSFRFRGH 268 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 S+ DP YR R+E+ +R +DP+ + L + + EI V + + +V FA Sbjct: 269 SVVDPDRYRDRDEVRRLRDINDPVAKYTACLKDAGLLDDTRINEIAEQVEREVEEAVNFA 328 Query: 348 QSDKEPDPAELYSDI 362 + P LY I Sbjct: 329 EESPFPSLDTLYDYI 343 >gi|116073371|ref|ZP_01470633.1| Pyruvate dehydrogenase (lipoamide) [Synechococcus sp. RS9916] gi|116068676|gb|EAU74428.1| Pyruvate dehydrogenase (lipoamide) [Synechococcus sp. RS9916] Length = 363 Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 130/322 (40%), Positives = 201/322 (62%), Gaps = 9/322 (2%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGD 103 + +++ L+ YR M L RRFE+K ++Y G + GF HL GQEAV G+ ++ + D Sbjct: 35 ASIDRDTGLALYRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIGAMKRQHD 94 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG+ +G Sbjct: 95 WFCSTYRDHVHALSAGVPAREVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGYAFIGEG 154 Query: 164 VSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + + G AF ++Y+R SD + FGDG N GQ YE N+A LW L +I+V+E Sbjct: 155 IPVALGAAFTSRYKRDALGEAGSDAVTAAFFGDGTCNIGQFYECLNMAQLWKLPIIFVVE 214 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN++A+G +RA+++ ++ SF + G +VDGMD+ AV+A ++AVA RA +GP + Sbjct: 215 NNKWAIGMDHNRATSEPEIWRKAGSFGMAGEEVDGMDVLAVRAATERAVARARAGEGPTL 274 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +E LTYR+RGHS++DP R EE + + DPI+ + + L+ A+ DL+ IE + Sbjct: 275 LECLTYRFRGHSLADPDELRAEEE-KQFWAQRDPIKALERDLVSAGLATADDLRTIEKEI 333 Query: 337 RKIINNSVEFAQSDKEPDPAEL 358 + +SV+FA S EPD +EL Sbjct: 334 DAEVQDSVDFALSAPEPDGSEL 355 >gi|6715645|gb|AAF26472.1|AC007323_13 T25K16.8 [Arabidopsis thaliana] Length = 679 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 130/322 (40%), Positives = 194/322 (60%), Gaps = 7/322 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G LT+ D +++ Sbjct: 80 TKEEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLTKSDSVVS 139 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A +M+EL G+ G +G+GGSMHMFS ++ GG +G + + Sbjct: 140 TYRDHVHALSKGVSARAVMSELFGKVTGCCRGQGGSMHMFSKEHNMLGGFAFIGEGIPVA 199 Query: 168 TGIAFANKYRRS------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 TG AF++KYRR D + V FGDG N GQ +E N+AAL+ L +I+V+ENN +A Sbjct: 200 TGAAFSSKYRREVLKQDCDDVTVAFFGDGTCNNGQFFECLNMAALYKLPIIFVVENNLWA 259 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 +G S RA++ K+G +F +PG+ VDGMD+ V+ +AV R +GP ++E T Sbjct: 260 IGMSHLRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAVTRARRGEGPTLVECET 319 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR+RGHS++DP R E + + DPI ++K L+ NK A E +LK IE + +++ Sbjct: 320 YRFRGHSLADPDELRDAAEKAKY-AARDPIAALKKYLIENKLAKEAELKSIEKKIDELVE 378 Query: 342 NSVEFAQSDKEPDPAELYSDIL 363 +VEFA + +P ++L ++ Sbjct: 379 EAVEFADASPQPGRSQLLENVF 400 >gi|196228097|ref|ZP_03126964.1| Pyruvate dehydrogenase (acetyl-transferring) [Chthoniobacter flavus Ellin428] gi|196227500|gb|EDY22003.1| Pyruvate dehydrogenase (acetyl-transferring) [Chthoniobacter flavus Ellin428] Length = 358 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 134/322 (41%), Positives = 198/322 (61%), Gaps = 4/322 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S+ +KEQ+L R ML IRRFE++A + Y +GGF HL IGQE+V +G + + D Sbjct: 17 SKLSKEQKLDLLRGMLRIRRFEQEALKQYNSAKMGGFLHLYIGQESVAMGACSLMGDNDH 76 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR HGH LA G+ ++ MAEL G+ G SKGKGGSMH F+ F+GGHGIVG Q Sbjct: 77 VITAYRCHGHALAVGMAMNECMAELFGKATGCSKGKGGSMHFFAPDKNFWGGHGIVGGQT 136 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+A+ KY+ + GDGA NQG YES N+A+L+ L V+Y+IENN+Y+MGT Sbjct: 137 PLGLGLAYGLKYKGLKGAALCFLGDGAVNQGCFYESLNMASLFELPVVYIIENNKYSMGT 196 Query: 225 SVSRASAQTN-FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S+ R+S + ++RG +F + Q G DI V+AT+ A+ P I+E+ TYR Sbjct: 197 SLERSSVVKDCLAQRGEAFLVDWAQAGGEDIYEVRATVQTAIERAHNSSKPTILELDTYR 256 Query: 284 YRGHSMSDP---ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 Y GHS++D YR +EI + +HDPI+ ++RL+ +E + +++ + + Sbjct: 257 YYGHSVADANHKGGYRPNDEIETYKKDHDPIQLFKRRLIGEGLLTEEEFEKLSEDAKTEA 316 Query: 341 NNSVEFAQSDKEPDPAELYSDI 362 SV++A+ P+ ++ D+ Sbjct: 317 KASVQYAEDSPLPEDGAIFEDV 338 >gi|15223294|ref|NP_171617.1| PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA); pyruvate dehydrogenase (acetyl-transferring) [Arabidopsis thaliana] gi|2454182|gb|AAB86803.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|15450707|gb|AAK96625.1| At1g01090/T25K16_8 [Arabidopsis thaliana] gi|17380622|gb|AAL36074.1| At1g01090/T25K16_8 [Arabidopsis thaliana] gi|110742108|dbj|BAE98984.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|332189112|gb|AEE27233.1| pyruvate dehydrogenase E1 component subunit alpha [Arabidopsis thaliana] Length = 428 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 130/322 (40%), Positives = 194/322 (60%), Gaps = 7/322 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G LT+ D +++ Sbjct: 80 TKEEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLTKSDSVVS 139 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A +M+EL G+ G +G+GGSMHMFS ++ GG +G + + Sbjct: 140 TYRDHVHALSKGVSARAVMSELFGKVTGCCRGQGGSMHMFSKEHNMLGGFAFIGEGIPVA 199 Query: 168 TGIAFANKYRRS------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 TG AF++KYRR D + V FGDG N GQ +E N+AAL+ L +I+V+ENN +A Sbjct: 200 TGAAFSSKYRREVLKQDCDDVTVAFFGDGTCNNGQFFECLNMAALYKLPIIFVVENNLWA 259 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 +G S RA++ K+G +F +PG+ VDGMD+ V+ +AV R +GP ++E T Sbjct: 260 IGMSHLRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAVTRARRGEGPTLVECET 319 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR+RGHS++DP R E + + DPI ++K L+ NK A E +LK IE + +++ Sbjct: 320 YRFRGHSLADPDELRDAAEKAKY-AARDPIAALKKYLIENKLAKEAELKSIEKKIDELVE 378 Query: 342 NSVEFAQSDKEPDPAELYSDIL 363 +VEFA + +P ++L ++ Sbjct: 379 EAVEFADASPQPGRSQLLENVF 400 >gi|113478382|ref|YP_724443.1| pyruvate dehydrogenase (lipoamide) [Trichodesmium erythraeum IMS101] gi|110169430|gb|ABG53970.1| Pyruvate dehydrogenase (lipoamide) [Trichodesmium erythraeum IMS101] Length = 343 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 134/324 (41%), Positives = 197/324 (60%), Gaps = 9/324 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ ++ + + ++ Sbjct: 18 TKEKALILYEDMVLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVSSGVIKAMRQDEDFVS 77 Query: 108 A-YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS + GG+ V + + Sbjct: 78 STYRDHVHALSAGVPAREVMAELFGKATGCSKGRGGSMHMFSATHNLLGGYAFVAEGIPV 137 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG AF +KYRR +D++ FGDGA N GQ +E N+AALW L +IYV+ENN+ Sbjct: 138 ATGAAFQSKYRRETMGNQAADQVTACFFGDGACNNGQFFECLNMAALWKLPIIYVVENNK 197 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA+++ K+ +F + G++VDGMDI AV + +AVA RA +GP +IE Sbjct: 198 WAIGMAHERATSEPEIYKKAHAFGMVGVEVDGMDILAVHSAAQEAVARARAGEGPTLIEA 257 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R +EE + + DPI++ L N +L I+ + + Sbjct: 258 LTYRFRGHSLADPDELRDQEE-KQYWFSRDPIKKFTTYLTENNLVDVAELVAIDKKIENL 316 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 I +V+FA + EP ELY I Sbjct: 317 ITEAVDFATNSPEPGSDELYRYIF 340 >gi|83814824|ref|YP_446081.1| pyruvate dehydrogenase E1 component, alpha subunit [Salinibacter ruber DSM 13855] gi|83756218|gb|ABC44331.1| Pyruvate dehydrogenase E1 component, alpha subunit [Salinibacter ruber DSM 13855] Length = 470 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 135/312 (43%), Positives = 194/312 (62%), Gaps = 4/312 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ-MITAYRE 111 L R MLL RRFE + Q+Y + GF HL IGQEAV G ++ GD +ITAYR+ Sbjct: 151 LDLLRNMLLQRRFENRCRQMYQRQKISGFLHLYIGQEAVSTGSVNAIELGDDSVITAYRD 210 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 HG LA G+ MAEL G++ G SKGKGGSMH F + GGH IVGA + LG G+A Sbjct: 211 HGMGLAMGITPEAGMAELFGKETGCSKGKGGSMHFFDAEKKMMGGHAIVGAHLPLGAGLA 270 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 FA+KYR D +C+ FGDGA +QG E+ N+A ++ L +++V ENNQYAMGT+V RA + Sbjct: 271 FAHKYRGEDNVCLCFFGDGAMHQGAFREACNLAGIYELPIVFVCENNQYAMGTAVDRAFS 330 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAV-KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + K G +F+ P GMD+ +V KA D Y R + P ++E+ TYRY+GHS++ Sbjct: 331 KPDLFKHGYNFDFPASLASGMDVFSVNKAVQDHVENYARNDQ-PSLLEVRTYRYQGHSIT 389 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 DPA YR E+++ R + D I +++ +L A+E D++ I+ V++ + ++++ A Sbjct: 390 DPAEYRGEGELDQ-RQSQDAINRLQDYILDRGLATEADMEAIDEEVKERVKDAIDAANEA 448 Query: 351 KEPDPAELYSDI 362 PD +Y DI Sbjct: 449 SFPDEEAIYDDI 460 >gi|297843008|ref|XP_002889385.1| PDH-E1 alpha [Arabidopsis lyrata subsp. lyrata] gi|297335227|gb|EFH65644.1| PDH-E1 alpha [Arabidopsis lyrata subsp. lyrata] Length = 432 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 130/322 (40%), Positives = 194/322 (60%), Gaps = 7/322 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G LT+ D +++ Sbjct: 84 TKEEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLTKSDSVVS 143 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A +M+EL G+ G +G+GGSMHMFS ++ GG +G + + Sbjct: 144 TYRDHVHALSKGVSARAVMSELFGKVTGCCRGQGGSMHMFSKEHNMLGGFAFIGEGIPVA 203 Query: 168 TGIAFANKYRRS------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 TG AF++KYRR + + V FGDG N GQ YE N+AAL+ L +I+V+ENN +A Sbjct: 204 TGAAFSSKYRREVLKQDCEDVTVAFFGDGTCNNGQFYECLNMAALYKLPIIFVVENNLWA 263 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 +G S RA++ K+G +F +PG+ VDGMD+ V+ +AV R +GP ++E T Sbjct: 264 IGMSHLRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAVTRARRGEGPTLVECET 323 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR+RGHS++DP R E + + DPI ++K L+ NK A E +LK IE + +++ Sbjct: 324 YRFRGHSLADPDELRDAAEKAKY-AARDPIVALKKYLIENKLAKEAELKSIEKKIDELVE 382 Query: 342 NSVEFAQSDKEPDPAELYSDIL 363 +VEFA + +P ++L ++ Sbjct: 383 EAVEFADASPQPGRSQLLENVF 404 >gi|86605236|ref|YP_473999.1| dehydrogenase E1 component, alpha subunit [Synechococcus sp. JA-3-3Ab] gi|86553778|gb|ABC98736.1| dehydrogenase E1 component, alpha subunit [Synechococcus sp. JA-3-3Ab] Length = 333 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 131/312 (41%), Positives = 195/312 (62%), Gaps = 1/312 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + E+ Y M+L R FE+K ++Y G + GF HL GQEAV G+ +L D + + Sbjct: 15 SAEEARMLYEDMVLGRLFEDKCAEMYYKGKMFGFVHLYNGQEAVSTGVIKALKPTDYVCS 74 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ G+ +MAEL G+ G SKG+GGSMH+FS ++ F GG+ V + + Sbjct: 75 TYRDHVHALSTGIPPRAVMAELFGKATGCSKGRGGSMHLFSAEHNFLGGYAFVAEGIPVA 134 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG AF+ KYR +D++ V FGDGA N GQ YE N+AALW L ++YV+ENN +A+G + Sbjct: 135 TGAAFSAKYRGTDQVTVCFFGDGACNNGQFYECLNMAALWKLPIVYVVENNFWAIGMAHK 194 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RA++ T+ +G +F +PG QVDGMD+ AV+ +A+A RA +GP ++E +TYR+RGH Sbjct: 195 RATSVTDIYLKGPAFGMPGYQVDGMDVLAVREAAQQAIARARAGEGPTLLECITYRFRGH 254 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 S++DP R+ EE E DPI+++ + L + +E D + I+ V +I ++V FA Sbjct: 255 SLADPDELRSPEE-KEFWRQRDPIKRLERYALEHNLMTEADFQAIQEKVSAVIEDAVLFA 313 Query: 348 QSDKEPDPAELY 359 EP EL+ Sbjct: 314 LESPEPTLDELH 325 >gi|294508002|ref|YP_003572060.1| Pyruvate dehydrogenase E1 component alpha subunit [Salinibacter ruber M8] gi|294344330|emb|CBH25108.1| Pyruvate dehydrogenase E1 component alpha subunit [Salinibacter ruber M8] Length = 470 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 134/312 (42%), Positives = 195/312 (62%), Gaps = 4/312 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ-MITAYRE 111 L R MLL RRFE + Q+Y + GF HL IGQEAV G ++ GD +ITAYR+ Sbjct: 151 LDLLRNMLLQRRFENRCRQMYQRQKISGFLHLYIGQEAVSTGSVNAIELGDDSVITAYRD 210 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 HG LA G+ + MAEL G++ G SKGKGGSMH F + GGH IVGA + LG G+A Sbjct: 211 HGMGLAMGITPEEGMAELFGKETGCSKGKGGSMHFFDAEKKMMGGHAIVGAHLPLGAGLA 270 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 FA+KY+ D +C+ FGDGA +QG E+ N+A ++ L +++V ENNQYAMGT+V RA + Sbjct: 271 FAHKYQGEDNVCLCFFGDGAMHQGAFREACNLAGIYELPIVFVCENNQYAMGTAVDRAFS 330 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAV-KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + K G +F+ P GMD+ +V KA D Y R + P ++E+ TYRY+GHS++ Sbjct: 331 KPDLFKHGYNFDFPASLASGMDVFSVNKAVQDHVENYARNDQ-PSLLEVRTYRYQGHSIT 389 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 DPA YR E+++ R + D I +++ +L A+E D++ I+ V++ + ++++ A Sbjct: 390 DPAEYRGEGELDQ-RQSQDAINRLQDYILDRGLATEADMEAIDEEVKERVKDAIDAANEA 448 Query: 351 KEPDPAELYSDI 362 PD +Y DI Sbjct: 449 SFPDEEAIYDDI 460 >gi|58697430|ref|ZP_00372731.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Wolbachia endosymbiont of Drosophila simulans] gi|58536147|gb|EAL59751.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Wolbachia endosymbiont of Drosophila simulans] Length = 203 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/203 (60%), Positives = 153/203 (75%) Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 MG++GGFCHL IGQEAV VG + + GD IT+YR+HG +LAC D + +MAELTG++ Sbjct: 1 MGLIGGFCHLSIGQEAVAVGTQAASKLGDAFITSYRDHGLMLACDSDPNVVMAELTGKET 60 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G SKGKGGSMH+F + F+GGHGIVGAQV +GTGIAFANKY++ D + FGDGAANQ Sbjct: 61 GCSKGKGGSMHVFDVEKKFFGGHGIVGAQVPIGTGIAFANKYKKKDNVVFTYFGDGAANQ 120 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 GQVYESFN+A+LW L V+Y+IENN+YAMGTSV R++ T KRG SF IPG QVDGMD Sbjct: 121 GQVYESFNMASLWELPVVYIIENNEYAMGTSVQRSTLVTELYKRGESFGIPGKQVDGMDF 180 Query: 255 RAVKATMDKAVAYCRAHKGPIII 277 +V +A + R+ KG I++ Sbjct: 181 FSVYEATSEAAEHTRSGKGAILL 203 >gi|219848519|ref|YP_002462952.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Chloroflexus aggregans DSM 9485] gi|219542778|gb|ACL24516.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Chloroflexus aggregans DSM 9485] Length = 355 Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 127/304 (41%), Positives = 184/304 (60%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y MLLIRRFEE+AG++Y +GG+CHL +G+EA IVG+ +LT D + T YREHG+I Sbjct: 24 YYQMLLIRRFEERAGEMYVKAKIGGYCHLNLGEEATIVGLMAALTPDDYIFTNYREHGYI 83 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A GV +MAEL G++ G+S G+GGSMH+F K F GG+ IVG Q+ L G A+A + Sbjct: 84 IARGVPPRPVMAELFGKETGVSGGRGGSMHLFDRKTNFMGGYAIVGGQIPLAVGAAYALR 143 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y+ + V GDG N G YES N+A LW V++ I NN Y MGTSV S++ + Sbjct: 144 YQGKPGVVVAQMGDGTTNIGAFYESLNLAKLWKCPVLFFIVNNGYGMGTSVEAGSSEPDL 203 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 K+G SF + G +VDG D+ AV+ + + A A P II+ +++R+RGHS+ D Y Sbjct: 204 WKKGASFRVYGERVDGTDVLAVRDVVRRLRARAEAEGEPAIIDAVSFRFRGHSVIDADRY 263 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R E + R +DPI + LL + + LK + V + + +++FA + +P Sbjct: 264 RDPEVVRRGRELYDPIRKFAALLLDHGVIDDEWLKSMTERVEREVQEAIDFANNSPDPKF 323 Query: 356 AELY 359 +LY Sbjct: 324 EDLY 327 >gi|222055048|ref|YP_002537410.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacter sp. FRC-32] gi|221564337|gb|ACM20309.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacter sp. FRC-32] Length = 325 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 124/318 (38%), Positives = 187/318 (58%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F E L Y L R FEE + Y G + GF HL GQEAV VG +L + D ++ Sbjct: 9 FPDEDLLHMYGQTALCREFEESCAEQYTKGHITGFLHLYSGQEAVAVGSTKALQQNDYIL 68 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +AYREH + G + ++MAEL G+ G+ KGKGGSMH+FS + F GG+ IVG Q + Sbjct: 69 SAYREHAQAIVRGAEPKRVMAELFGKATGLCKGKGGSMHLFSPELNFMGGYAIVGGQFPI 128 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+AFA+K++ +I FGD A NQG +E+ N A +W L V+++ ENN Y +GT V Sbjct: 129 AVGLAFASKFKNEGRIAACFFGDAAVNQGNFHEALNWARVWELPVLFICENNFYGIGTEV 188 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+SA + +R +++P +VDGMD+ AV + A + R P ++E +TYR+RG Sbjct: 189 HRSSALPDIHRRTCGYDMPSERVDGMDVIAVYQAVSHAAEWVREQSRPYLLEAMTYRFRG 248 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSM+DP YR+ E+ E+ + DP+ ++ +RL+ A + L I + + +V+F Sbjct: 249 HSMADPGKYRSTAEL-ELWKSRDPLLKLGRRLVQEGIAEQERLDAIRAQAVETVQEAVKF 307 Query: 347 AQSDKEPDPAELYSDILI 364 A+ P+ E+Y+D+ I Sbjct: 308 AEESPWPEDGEVYTDVYI 325 >gi|317969126|ref|ZP_07970516.1| pyruvate dehydrogenase E1 alpha subunit [Synechococcus sp. CB0205] Length = 369 Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 128/319 (40%), Positives = 194/319 (60%), Gaps = 9/319 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG-MKMSLTEGDQMI 106 +++ L YR M L RRFE+K ++Y G + GF HL GQEAV G +K + D Sbjct: 44 TRDEGLMLYRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIKAMKMQHDWFC 103 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+CGV A ++M+EL G++ G SKG+GGSMH+FS ++ GG+ +G + + Sbjct: 104 STYRDHVHALSCGVPAREVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGYAFIGEGIPV 163 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G AF ++Y+R SD + FGDG N GQ YE N+AALW L +++V+ENN+ Sbjct: 164 ALGAAFTSRYKRDALGDSSSDAVTAAFFGDGTCNIGQFYECLNMAALWKLPILFVVENNK 223 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G +RA++ ++ +F + G +VDGMD+ AV+ +A+ RA +GP ++E Sbjct: 224 WAIGMDHNRATSDPEIWRKAAAFGMAGEEVDGMDVLAVRGAAQRAIERARAGEGPTLLEC 283 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R E E + DPI+++ L+ + A+ +LK IE + Sbjct: 284 LTYRFRGHSLADPDELRAEAE-KEFWAQRDPIKRLAAHLIEHNLATTEELKGIEKEIDAE 342 Query: 340 INNSVEFAQSDKEPDPAEL 358 + + VEFA S EP P EL Sbjct: 343 VADCVEFALSAPEPKPEEL 361 >gi|159903876|ref|YP_001551220.1| pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. MIT 9211] gi|159889052|gb|ABX09266.1| Pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. MIT 9211] Length = 360 Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 129/329 (39%), Positives = 205/329 (62%), Gaps = 11/329 (3%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM--K 96 L G E + +++ L ++ M L RRFE+K ++Y G + GF HL GQEAV G+ Sbjct: 27 LSGGESAVIDRDTGLRLFKDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSSGVIGA 86 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 M L D + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG Sbjct: 87 MKLKH-DWFCSTYRDHVHALSAGVPAREVMSELFGKETGCSKGRGGSMHLFSKEHHLLGG 145 Query: 157 HGIVGAQVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 + +G + + G AF+++Y++ SD + FGDG N GQ +E N+A LW L Sbjct: 146 YAFIGEGIPVALGAAFSSRYKKEVFKDKNSDAVTAAFFGDGTCNNGQFFECLNMAQLWKL 205 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 +I+V+ENN++A+G + RA++ ++ +F + G +VDGMD+ AV+ ++A+ R Sbjct: 206 PIIFVVENNKWAIGMAHDRATSDPEIWRKAGAFGMEGEEVDGMDVLAVRGAAERALERAR 265 Query: 270 AHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 A +GP +IE LTYR+RGHS++DP R+ +E E + DP++ + K L+ + A+E +L Sbjct: 266 AGEGPSLIECLTYRFRGHSLADPDELRSEQE-KEFWAQRDPLKNLAKVLVSKELANENEL 324 Query: 330 KEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 K IE + + ++VEFA + K+PDP+EL Sbjct: 325 KNIEKEIDSEVTDAVEFALAAKDPDPSEL 353 >gi|318042115|ref|ZP_07974071.1| pyruvate dehydrogenase E1 alpha subunit [Synechococcus sp. CB0101] Length = 369 Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 127/319 (39%), Positives = 195/319 (61%), Gaps = 9/319 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG-MKMSLTEGDQMI 106 ++++ L YR M L RRFE+K ++Y G + GF HL GQEAV G +K + D Sbjct: 44 SRDEGLMLYRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIKAMKMQHDWFC 103 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+CGV A ++M+EL G++ G SKG+GGSMH+FS ++ GG+ +G + + Sbjct: 104 STYRDHVHALSCGVPAREVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGYAFIGEGIPV 163 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G AF ++Y+R SD + FGDG N GQ YE N+AALW L +++V+ENN+ Sbjct: 164 ALGAAFTSRYKRDALGDASSDAVTAAFFGDGTCNIGQFYECLNMAALWKLPILFVVENNK 223 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G +RA++ ++ +F + G +VDGMD+ AV+ +A+ RA +GP ++E Sbjct: 224 WAIGMDHNRATSDPEIWRKAAAFGMAGEEVDGMDVLAVRGAAQRAIERARAGEGPTLLEC 283 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R E E + DPI+++ L+ + A+ +LK IE + Sbjct: 284 LTYRFRGHSLADPDELRAEAE-KEFWAQRDPIKRLAAHLIEHNLATADELKGIEKEIDAE 342 Query: 340 INNSVEFAQSDKEPDPAEL 358 + + VEFA + EP P EL Sbjct: 343 VADCVEFALAAPEPKPEEL 361 >gi|302784648|ref|XP_002974096.1| hypothetical protein SELMODRAFT_149464 [Selaginella moellendorffii] gi|300158428|gb|EFJ25051.1| hypothetical protein SELMODRAFT_149464 [Selaginella moellendorffii] Length = 435 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 131/323 (40%), Positives = 190/323 (58%), Gaps = 8/323 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +E+ L Y M+L R FE+ Q+Y + GF HL GQEAV G SL + D + + Sbjct: 86 TREEGLELYEDMILGRCFEDMCAQMYYRSKMFGFVHLYNGQEAVSTGFIKSLKKDDYICS 145 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A ++M+EL G+ G +G+GGSMHMFS ++ GG +G + + Sbjct: 146 TYRDHVHALSKGVPARQVMSELFGKATGCCRGQGGSMHMFSKEHRLLGGFAFIGEGIPVA 205 Query: 168 TGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 TG AF KY R D + + FGDG N GQ +E N+AALW L ++YV+ENN + Sbjct: 206 TGAAFNTKYSREVLKDLSVDAVTLAFFGDGTCNNGQFFECLNMAALWKLPIVYVVENNLW 265 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+G RA++ K+G +F +PG+ VDGMD+ V+ +A+A R GP ++E Sbjct: 266 AIGMDHFRATSVPEIWKKGEAFGMPGVHVDGMDVLKVREVAKEAIARARRGDGPTLVECE 325 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHS++DP R E+ N+ + DPI +K LL N ASE DLK IE + +I+ Sbjct: 326 TYRYRGHSLADPDELRKPEQKNKY-AVRDPIAAFKKYLLENGLASEADLKTIEKKIDEIV 384 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 ++VEFA + P ++L ++ Sbjct: 385 EDAVEFADASPLPPRSQLLENVF 407 >gi|90994458|ref|YP_536948.1| pyruvate dehydrogenase E1 component alpha subunit [Porphyra yezoensis] gi|122194709|sp|Q1XDM0|ODPA_PORYE RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|90819022|dbj|BAE92391.1| pyruvate dehydrogenase E1 component alpha subunit [Porphyra yezoensis] Length = 346 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 134/319 (42%), Positives = 193/319 (60%), Gaps = 8/319 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 NK L Y MLL R FE+ Q+Y G + GF HL GQEAV G+ L D + Sbjct: 21 LNKSNLLVLYEDMLLGRNFEDMCAQMYYKGKMFGFVHLYNGQEAVSTGVIKLLNPTDYVC 80 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV + +MAEL G++ G SKG+GGSMH+FS + F GG + + + Sbjct: 81 STYRDHVHALSKGVPSKNVMAELFGKETGCSKGRGGSMHIFSAPHNFLGGFAFIAEGIPV 140 Query: 167 GTGIAFANKYRRS------DKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG AF + YR+ D CF GDG N GQ +E N+A LW L +I+V+ENNQ Sbjct: 141 ATGAAFQSIYRQQVLKETEDLRVTACFFGDGTTNNGQFFECLNMAVLWKLPIIFVVENNQ 200 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + R+S+ K+ +F +PG++VDGMD+ AV+ +AV R GP +IE Sbjct: 201 WAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQAAKQAVQRARQGDGPTLIEA 260 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R+R+E E DPI++++K +L N+ A+ G+L EI+ V+ Sbjct: 261 LTYRFRGHSLADPDELRSRQE-KEAWVARDPIKKLKKYILDNEIANIGELNEIQNAVKTE 319 Query: 340 INNSVEFAQSDKEPDPAEL 358 + +V+FA S EP+ +EL Sbjct: 320 LEQAVKFAISSPEPNMSEL 338 >gi|166367192|ref|YP_001659465.1| pyruvate dehydrogenase E1 component, alpha subunit [Microcystis aeruginosa NIES-843] gi|166089565|dbj|BAG04273.1| pyruvate dehydrogenase E1 component, alpha subunit [Microcystis aeruginosa NIES-843] Length = 344 Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 139/319 (43%), Positives = 203/319 (63%), Gaps = 9/319 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 K + L Y M+L R FE+K ++Y G + GF HL GQEA+ G+ +L +G+ ++ Sbjct: 18 TKAEGLRLYEDMVLGRMFEDKCAEMYYRGKMFGFVHLYNGQEAISSGIIKALRQGEDYVS 77 Query: 108 A-YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS ++ GG+ V + + Sbjct: 78 STYRDHVHALSAGVPAQEVMAELFGKATGCSKGRGGSMHMFSAEHKLLGGYAFVAEGIPV 137 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG AF +KYRR +D++ V FGDGA+N GQ +E N+AALW L +IYV+ENN+ Sbjct: 138 ATGAAFQSKYRREAMGDASADQVTVCFFGDGASNNGQFFECLNMAALWKLPIIYVVENNK 197 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA++Q K+ F++ G++VDGMD+ AV A +AVA RA +GP +IE Sbjct: 198 WAIGMAHDRATSQPEIYKKASVFSMVGVEVDGMDVVAVHAAAREAVARARAGEGPTLIEA 257 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R+ +E + DPI + L A+ +LKEIE ++ Sbjct: 258 LTYRFRGHSLADPDELRSADE-KQFWGERDPITRFAAYLYERDLATREELKEIEQKIQAE 316 Query: 340 INNSVEFAQSDKEPDPAEL 358 I +V+FA+S EPDP+EL Sbjct: 317 IEEAVKFAESSPEPDPSEL 335 >gi|170583547|ref|XP_001896632.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial [Brugia malayi] gi|158596156|gb|EDP34555.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial, putative [Brugia malayi] Length = 338 Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 139/309 (44%), Positives = 192/309 (62%), Gaps = 6/309 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M +IR+ E+ + LY + GFCHL GQEA VG+ + D +IT+YR HG Sbjct: 2 YKQMQVIRKMEQASDLLYKDRKIRGFCHLYAGQEACAVGLYAAKHPDDSIITSYRCHGFT 61 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +I++EL GR G GKGGSMHM+ KN +YGG+GIVGAQ LG GIAFA K Sbjct: 62 YLVRNSVKEILSELLGRSHGNVNGKGGSMHMYG-KN-YYGGNGIVGAQQPLGAGIAFAIK 119 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y R + +GDGAANQGQ++E+ NI ALW+L +++ ENN Y MGT SR+SA T++ Sbjct: 120 YNRKPNVSFTIYGDGAANQGQLFEAANICALWHLPCVFICENNGYGMGTPTSRSSASTDY 179 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA-HKGPIIIEMLTYRYRGHSMSDP-A 293 RG F IPG+ VD MD+ AV+ ++ A YC A P+ IE TYR+ GHS+SDP Sbjct: 180 YTRG-DF-IPGIWVDAMDVLAVRESIKFARKYCTAGDNCPLFIEFATYRFYGHSVSDPGT 237 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREE+ +R DPI ++ R++ + A++ +LK I+ + +N +V+FA D Sbjct: 238 SYRTREEVQNIRKTCDPISLLKNRIITSNLATKNELKAIDNEAKDEVNEAVKFATDDPVI 297 Query: 354 DPAELYSDI 362 L +DI Sbjct: 298 SMDALVTDI 306 >gi|297563720|ref|YP_003682694.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848168|gb|ADH70188.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 408 Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 129/308 (41%), Positives = 189/308 (61%), Gaps = 1/308 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR ML IRRFEE+ Q Y +GG+CHL +G+EA +VG+ +L E D + T YR+H Sbjct: 78 LDYYRQMLFIRRFEERTAQAYTQARIGGYCHLNLGEEATVVGLMTALQERDYLFTNYRDH 137 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G+ + G+D ++MAEL GR G+SKG GGSMHM+ T+ GG+GIVG Q+ L G A Sbjct: 138 GYAIGKGMDPKRVMAELYGRVDGVSKGWGGSMHMYDTETRMLGGYGIVGGQLPLAAGAAL 197 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A YR D++ + GDG N G +E+ NIA LWNL +++V+ NN MGT+V +SA+ Sbjct: 198 AVSYRGGDEVVMCQMGDGTTNIGAWHETLNIAKLWNLPIVFVVINNFTGMGTTVEMSSAE 257 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 KRG +F I G +VDG D+ AV+ T + + R + P ++E +YR +GHS+ DP Sbjct: 258 PELYKRGSAFRIEGERVDGRDVLAVRDTASRLIERARKEQTPFLLEAWSYRMKGHSVVDP 317 Query: 293 ANYRTREEINEMRS-NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 A YRT E+ +E RS +DPI RL ++ +EI +V+ + + +FA++ Sbjct: 318 AKYRTDEQKDEARSEENDPIALFEARLTEEGLLTDELREEIAASVKAEVTEAADFAENSP 377 Query: 352 EPDPAELY 359 P+ + L+ Sbjct: 378 HPEVSTLF 385 >gi|37521098|ref|NP_924475.1| pyruvate dehydrogenase E1 component alpha [Gloeobacter violaceus PCC 7421] gi|35212094|dbj|BAC89470.1| pyruvate dehydrogenase E1 component alpha [Gloeobacter violaceus PCC 7421] Length = 334 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 130/312 (41%), Positives = 187/312 (59%), Gaps = 1/312 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++ + L YR M+L R FE+ Q+Y G + GF HL GQEAV G+ ++ D + + Sbjct: 16 DRPEALVLYRDMVLGRTFEDTCAQMYYRGKMFGFVHLYNGQEAVSTGVIKAMRPDDYVTS 75 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A +MAEL G+ G SKG+GGSMH+FS ++ GG V + + Sbjct: 76 TYRDHVHALSKGVPARSVMAELFGKATGCSKGRGGSMHLFSAEHNLLGGFAFVAEGIPIA 135 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG F Y+ +D++ FGDGA N GQ +E N+AALWNL V+YV+ENN +++G Sbjct: 136 TGAGFTAVYKGTDQVSACFFGDGATNNGQFFECLNMAALWNLPVLYVVENNLWSIGMYHH 195 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RAS+ K+ +F IPG++VDGMD+ AV+A +A+ RA GP +IE TYR+RGH Sbjct: 196 RASSVIEIYKKADAFGIPGVRVDGMDVLAVRAVAKEAIERARAGGGPTLIECTTYRFRGH 255 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 S++DP R E E DPI ++ + + AS +LK I+ +R I+++V FA Sbjct: 256 SLADPDELRDPAE-KEFWRKQDPIPRLAAFVREQELASAEELKAIDQEIRAEIDDAVLFA 314 Query: 348 QSDKEPDPAELY 359 + EP ELY Sbjct: 315 EESPEPPIDELY 326 >gi|297266059|ref|XP_001113273.2| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like [Macaca mulatta] Length = 359 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 147/313 (46%), Positives = 199/313 (63%), Gaps = 36/313 (11%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E L YR+M +RR E KA QLY ++ FCHLC GQEA VG++ + D +I Sbjct: 56 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRAFCHLCDGQEACCVGLEAGINPTDHLI 115 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG G+ +I+AELTGR+GG +KGKGGSMHM++ KN FYGG+GI+ AQ Sbjct: 116 TAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYA-KN-FYGGNGIMEAQ--- 170 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GQ++E++N+AALW L I++ ENN+Y MGTS Sbjct: 171 ----------------------------GQIFEAYNMAALWKLPCIFICENNRYGMGTSF 202 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T++ KRG F IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY G Sbjct: 203 ERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHG 260 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP +YRTREEI E+RS DP ++ R++++ AS +LKEI++ V+K I ++ + Sbjct: 261 HSMSDPGVSYRTREEIQEVRSKSDPTMLLKDRMVNSNLASVEELKEIDVEVKKEIEDAAQ 320 Query: 346 FAQSDKEPDPAEL 358 FA +D EP EL Sbjct: 321 FATADPEPPLEEL 333 >gi|118486324|gb|ABK95003.1| unknown [Populus trichocarpa] Length = 442 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 126/323 (39%), Positives = 189/323 (58%), Gaps = 8/323 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L D +++ Sbjct: 93 TKEEGLEVYEDMILGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKREDSVVS 152 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A +M+EL G+ G +G+GGSMHMFS ++ GG +G + + Sbjct: 153 TYRDHVHALSKGVPARAVMSELFGKTTGCCRGQGGSMHMFSKEHNLIGGFAFIGEGIPVA 212 Query: 168 TGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 TG AF++KYRR D + + FGDG N GQ +E N+AALW L +++V+ENN + Sbjct: 213 TGAAFSSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLW 272 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+G S RA++ K+G +F +PG+ VDGMD+ V+ +A+ R +GP ++E Sbjct: 273 AIGMSHVRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPTLVECE 332 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYR+RGHS++DP R E + DPI ++K ++ N ASE +LK IE + +++ Sbjct: 333 TYRFRGHSLADPDELRDPAE-KARYAARDPIAALKKYMIENSLASEAELKAIEKKIDEVV 391 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 +VEFA P ++L ++ Sbjct: 392 EEAVEFADESPHPSRSQLLENVF 414 >gi|302770913|ref|XP_002968875.1| hypothetical protein SELMODRAFT_227859 [Selaginella moellendorffii] gi|300163380|gb|EFJ29991.1| hypothetical protein SELMODRAFT_227859 [Selaginella moellendorffii] Length = 436 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 130/323 (40%), Positives = 190/323 (58%), Gaps = 8/323 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +E+ L Y M+L R FE+ Q+Y + GF HL GQEAV G +L + D + + Sbjct: 87 TREEGLELYEDMILGRCFEDMCAQMYYRSKMFGFVHLYNGQEAVSTGFVKALKKDDYICS 146 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A ++M+EL G+ G +G+GGSMHMFS ++ GG +G + + Sbjct: 147 TYRDHVHALSKGVPARQVMSELFGKATGCCRGQGGSMHMFSKEHRLLGGFAFIGEGIPVA 206 Query: 168 TGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 TG AF KY R D + + FGDG N GQ +E N+AALW L ++YV+ENN + Sbjct: 207 TGAAFNTKYSREVLKDLSVDAVTLAFFGDGTCNNGQFFECLNMAALWKLPIVYVVENNLW 266 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+G RA++ K+G +F +PG+ VDGMD+ V+ +A+A R GP ++E Sbjct: 267 AIGMDHFRATSVPEIWKKGEAFGMPGVHVDGMDVLKVREVAKEAIARARRGDGPTLVECE 326 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHS++DP R E+ N+ + DPI +K LL N ASE DLK IE + +I+ Sbjct: 327 TYRYRGHSLADPDELRKPEQKNKY-AVRDPIAAFKKYLLENGLASEADLKAIEKKIDEIV 385 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 ++VEFA + P ++L ++ Sbjct: 386 EDAVEFADASPLPPRSQLLENVF 408 >gi|1051097|gb|AAB59581.1| pyruvate dehydrogenase E1-alpha subunit precursor [Homo sapiens] Length = 390 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 144/323 (44%), Positives = 198/323 (61%), Gaps = 10/323 (3%) Query: 40 EGFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 EG V+ +E L YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + Sbjct: 48 EGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLERA 107 Query: 99 LTEGDQMITAYRE-HGHILACGVDAS-KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 T Q I++ +L+ G S K L + + KGK + G Sbjct: 108 STP--QTISSQPTGLTALLSPGAFPSEKFSQSLQDEKEVVLKGKEDRCTCMPRTST--GA 163 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + GIA A KY D++C+ +GDGAANQGQ++E++N+AALW L I++ E Sbjct: 164 MASWERRCPWAAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICE 223 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A AYCR+ KGPI+ Sbjct: 224 NNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFAAAYCRSGKGPIL 281 Query: 277 IEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ Sbjct: 282 MELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVE 341 Query: 336 VRKIINNSVEFAQSDKEPDPAEL 358 VRK I ++ +FA +D EP EL Sbjct: 342 VRKEIEDAAQFATADPEPPLEEL 364 >gi|149923492|ref|ZP_01911894.1| Pyruvate dehydrogenase (lipoamide), alpha subunit [Plesiocystis pacifica SIR-1] gi|149815622|gb|EDM75152.1| Pyruvate dehydrogenase (lipoamide), alpha subunit [Plesiocystis pacifica SIR-1] Length = 339 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 128/316 (40%), Positives = 187/316 (59%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K++ L A+R ML IRRFEE A + Y G + GF HL IGQEA+ VG+K+++ D+++ Sbjct: 19 KDETLKAFREMLRIRRFEETAARAYTRGKISGFLHLYIGQEAIAVGVKLAMQANDRVVGT 78 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HG+ LA G DA+ MAEL G+ G+ G GGSMH F NG +GG+ I+G V + Sbjct: 79 YRDHGYALAQGSDANACMAELFGKATGLVGGVGGSMHYFDRPNGLWGGYAIIGNHVPVAA 138 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G AFA+KY D + + GDGA G +E +A LW+L VIY++ENN+Y+MGT + R Sbjct: 139 GHAFASKYLGDDAVTMCFLGDGAVGIGPTHEGMTLAGLWDLPVIYIVENNRYSMGTPLER 198 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + + R + + + + D V+ + A+ R P +IE+LTYR+RGHS Sbjct: 199 TLPTEDITARAAGYGMARDRFELTDPFQVRERIGAAMKRAREESQPTLIEILTYRFRGHS 258 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YR + E+ RS D IE R+ L+ SE +L I+ V + ++ + FA Sbjct: 259 MSDPAKYRAKGELEAFRSR-DAIELSRRVLMEQHGMSEDELDAIDDEVIEEMDAAYTFAD 317 Query: 349 SDKEPDPAELYSDILI 364 +PDP + +I+I Sbjct: 318 ESPQPDPEHRFKNIMI 333 >gi|255548035|ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus communis] gi|223545554|gb|EEF47058.1| pyruvate dehydrogenase, putative [Ricinus communis] Length = 433 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 127/322 (39%), Positives = 189/322 (58%), Gaps = 7/322 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L + D +++ Sbjct: 85 TKEEGLVLYEDMVLGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVS 144 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A +M+EL G+ G +G+GGSMHMFS + GG +G + + Sbjct: 145 TYRDHVHALSKGVPARAVMSELFGKTTGCCRGQGGSMHMFSKDHNVLGGFAFIGEGIPVA 204 Query: 168 TGIAFANKYRRS------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 TG AF +KYRR D + + FGDG N GQ +E N+AALW L +++V+ENN +A Sbjct: 205 TGAAFTSKYRREVLKEDCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA 264 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 +G S RA++ K+G +F +PG+ VDGMD+ V+ +A+ R +GP ++E T Sbjct: 265 IGMSHLRATSDPQIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPTLVECET 324 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR+RGHS++DP R E + DPI ++K ++ N ASE +LK IE + +++ Sbjct: 325 YRFRGHSLADPDELRDPAE-KAHYAARDPITSLKKYIIENSLASEAELKAIEKKIDEVVE 383 Query: 342 NSVEFAQSDKEPDPAELYSDIL 363 +SVEFA P ++L ++ Sbjct: 384 DSVEFADESPVPPRSQLLENVF 405 >gi|154335649|ref|XP_001564063.1| pyruvate dehydrogenase E1 component alpha subunit [Leishmania braziliensis MHOM/BR/75/M2904] gi|134061094|emb|CAM38115.1| putative pyruvate dehydrogenase E1 component alpha subunit [Leishmania braziliensis MHOM/BR/75/M2904] Length = 378 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 154/355 (43%), Positives = 217/355 (61%), Gaps = 11/355 (3%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY 73 K L P K + D +P + ++ EQ + LM IRR E Q Y Sbjct: 14 KTLLKPQRPFKLHTATRTDMAPLP-----TEATYDTEQLKKSLTLMFRIRRMESLCDQSY 68 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQ 133 + + GFCHL IGQEA+ GM+ LT D ++T YR+HG +A G ++ AE+ GRQ Sbjct: 69 KLKKIRGFCHLYIGQEAIPAGMENILTFEDPIVTGYRDHGWYIARGGTPEEVFAEMFGRQ 128 Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA--FANKYRRSDK-ICVVCFGDG 190 GG SKGKGGSMHM+S +NGFYGG+GIVGAQV +G G+A FA + R S K + V +GDG Sbjct: 129 GGCSKGKGGSMHMYSVRNGFYGGNGIVGAQVPIGAGLAWRFAMENRDSPKHVAVTFYGDG 188 Query: 191 AANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD 250 AANQGQ+YES NIAAL L VI+ +ENN + MGTS +R S Q+ F +RG IPG+++D Sbjct: 189 AANQGQIYESMNIAALQRLPVIFAVENNHFGMGTSAARGSYQSEFYRRGDY--IPGIRID 246 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHD 309 GMD+ AV+ A +C + KGPI++E+ YRY GHSMSDP N YRT+ +I ++ D Sbjct: 247 GMDVLAVQEGTRYARDHCMSGKGPIVMELDCYRYMGHSMSDPDNQYRTKSDIQHVKQERD 306 Query: 310 PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 I ++R + +E ++ ++E V+K ++ ++ AQ EL++D+ + Sbjct: 307 CIRKMRDFMATEGIMTEEEMSKMEKEVKKEVDQDLQKAQKHPTTKLDELFTDVYV 361 >gi|224064370|ref|XP_002301442.1| predicted protein [Populus trichocarpa] gi|222843168|gb|EEE80715.1| predicted protein [Populus trichocarpa] Length = 355 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 126/323 (39%), Positives = 189/323 (58%), Gaps = 8/323 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L D +++ Sbjct: 6 TKEEGLEVYEDMILGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKREDSVVS 65 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A +M+EL G+ G +G+GGSMHMFS ++ GG +G + + Sbjct: 66 TYRDHVHALSKGVPARAVMSELFGKTTGCCRGQGGSMHMFSKEHNLIGGFAFIGEGIPVA 125 Query: 168 TGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 TG AF++KYRR D + + FGDG N GQ +E N+AALW L +++V+ENN + Sbjct: 126 TGAAFSSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLW 185 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+G S RA++ K+G +F +PG+ VDGMD+ V+ +A+ R +GP ++E Sbjct: 186 AIGMSHVRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPTLVECE 245 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYR+RGHS++DP R E + DPI ++K ++ N ASE +LK IE + +++ Sbjct: 246 TYRFRGHSLADPDELRDPAE-KARYAARDPIAALKKYMIENSLASEAELKAIEKKIDEVV 304 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 +VEFA P ++L ++ Sbjct: 305 EEAVEFADESPHPSRSQLLENVF 327 >gi|218513045|ref|ZP_03509885.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhizobium etli 8C-3] Length = 192 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 120/167 (71%), Positives = 143/167 (85%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V++F++++EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 25 GGPVADFDRDEELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAQK 84 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 EGDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GKGGSMHMFS + FYGGHGIV Sbjct: 85 EGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGKGGSMHMFSKEKHFYGGHGIV 144 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 GAQVSLGTG+AFAN YR + + + FGDGAANQGQVYESFN+AALW Sbjct: 145 GAQVSLGTGLAFANHYRGNGNVSIAYFGDGAANQGQVYESFNMAALW 191 >gi|291226652|ref|XP_002733307.1| PREDICTED: pyruvate dehydrogenase E1 alpha 1-like [Saccoglossus kowalevskii] Length = 392 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 134/324 (41%), Positives = 204/324 (62%), Gaps = 14/324 (4%) Query: 47 FNKEQELSAYRLMLLIRR-----FEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 N+++ L Y+ M IR FE K + ++ G H GQEA +G+ +L Sbjct: 53 LNRDEGLKFYKQMKTIRMLGTILFELKKEK----DLISGTVHTQTGQEACCIGIISALKL 108 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIV 160 D ++T YR HG+ A G+ I+AE++GR G KGKGGSMH+ + ++ F+GG I+ Sbjct: 109 DDPIVTTYRAHGYGYARGMTLRSILAEISGRTTGCVKGKGGSMHIAAPRDYNFFGGFTIL 168 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 G+Q+ + TG+AFA KYR I V +GDG+ANQ Q++E+FNIA+LWNL V+Y+ ENN Y Sbjct: 169 GSQIPIATGMAFAMKYRNKGNISVGIYGDGSANQSQIFEAFNIASLWNLPVMYICENNNY 228 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ T V RASA T F RG F +PG++ DGMD+ AV+ Y R ++GPII+ ++ Sbjct: 229 AISTPVKRASASTTFYTRG-DF-VPGIRADGMDVLAVREATKYCADYIRDNQGPIILVLM 286 Query: 281 TYRYRGHSMSDPAN--YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYRY GHS++ P+ YRT+EE + +++ D I +R +LL +K A+ +L +I+ +V++ Sbjct: 287 TYRYVGHSVNFPSTALYRTKEEEDRVKATSDAIHNLRDKLLTSKLATLQELSKIDADVKE 346 Query: 339 IINNSVEFAQSDKEPDPAELYSDI 362 + + E A+ D PD +E Y+D+ Sbjct: 347 ELFEATELAKKDPLPDISETYTDV 370 >gi|193290722|gb|ACF17669.1| putative pyruvate dehydrogenase E1 alpha subunit [Capsicum annuum] Length = 431 Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 127/323 (39%), Positives = 190/323 (58%), Gaps = 8/323 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L + D +++ Sbjct: 82 TKEEGLELYEDMVLGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVS 141 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A ++M+EL G+ G +G+GGSMHMFS ++ GG +G + + Sbjct: 142 TYRDHVHALSKGVPARQVMSELFGKTTGCCRGQGGSMHMFSKEHNVLGGFAFIGEGIPVA 201 Query: 168 TGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 TG AF +KYRR D + + FGDG N GQ YE N+AALW L +I+V+ENN + Sbjct: 202 TGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFYECLNMAALWKLPIIFVVENNLW 261 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+G S R+++ K+G +F +PG+ VDGMD+ V+ ++AV R +GP ++E Sbjct: 262 AIGMSHLRSTSDPEIWKKGPAFGMPGVHVDGMDVLKVREVANEAVGRARRGEGPTLVECE 321 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYR+RGHS++DP R E N + DPI ++K + N +E +LK I+ + +++ Sbjct: 322 TYRFRGHSLADPDELRDPAEKNHY-ATRDPITALKKYMFENNLVNEAELKAIDKKIDELV 380 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 SVEFA + P +L ++ Sbjct: 381 EESVEFADASPVPARNQLLENVF 403 >gi|196043641|ref|ZP_03110879.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus 03BB108] gi|225864751|ref|YP_002750129.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus 03BB102] gi|196025950|gb|EDX64619.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus 03BB108] gi|225788261|gb|ACO28478.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus 03BB102] Length = 332 Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 187/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y+ ML IR+FE+K +L+ GM+ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYKKMLEIRKFEDKVHELFAQGMLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 310 EFSENSPYPEDEELLKDVYV 329 >gi|163846908|ref|YP_001634952.1| pyruvate dehydrogenase [Chloroflexus aurantiacus J-10-fl] gi|222524730|ref|YP_002569201.1| pyruvate dehydrogenase [Chloroflexus sp. Y-400-fl] gi|163668197|gb|ABY34563.1| Pyruvate dehydrogenase (acetyl-transferring) [Chloroflexus aurantiacus J-10-fl] gi|222448609|gb|ACM52875.1| Pyruvate dehydrogenase (acetyl-transferring) [Chloroflexus sp. Y-400-fl] Length = 334 Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 128/319 (40%), Positives = 194/319 (60%), Gaps = 5/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++E E+ M +IR FEEKA +L+ G+V G HL IGQEAV +G ++ GD Sbjct: 19 INELGNERLREWVLRMQIIRAFEEKAEELFARGLVHGTMHLSIGQEAVAIGASAAMKPGD 78 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ +R HGH LA G D +MAE G++ G +G+GGSMH+ + + G +GIVG Sbjct: 79 YLLNHHRGHGHCLAWGSDVRLMMAEFLGKETGYCRGRGGSMHIANVEMNNLGANGIVGGG 138 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G+ + K RRS ++C+ FGDGA N G +ES N+A++WNL V+Y+ ENNQYAM Sbjct: 139 IPISVGVGLSIKKRRSSQVCLTIFGDGAVNTGAFHESLNMASIWNLPVVYLCENNQYAMS 198 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + +A + S+R ++ I G+ VDG D AV + +AVA R+ GP ++E +TYR Sbjct: 199 MPIQKACRLNHLSQRAAAYAIAGITVDGNDALAVYEAVRQAVARARSGYGPTLVEAITYR 258 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 ++GHS SD YR+R+E+ + +S DPI ++ RL+ S+ + K I R +I + Sbjct: 259 WKGHSKSDRQAYRSRDEVKDWQSR-DPIMRL-ARLIQ---MSDAEFKAIVDQARTMIEEA 313 Query: 344 VEFAQSDKEPDPAELYSDI 362 VEFAQ+ EPDP ++ + Sbjct: 314 VEFAQASPEPDPDTIFEGL 332 >gi|302389987|ref|YP_003825808.1| dehydrogenase E1 component [Thermosediminibacter oceani DSM 16646] gi|302200615|gb|ADL08185.1| dehydrogenase E1 component [Thermosediminibacter oceani DSM 16646] Length = 319 Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 130/308 (42%), Positives = 189/308 (61%), Gaps = 1/308 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + KE+ L YR M IRRFE + +L+ M+ G CHL +G+EA VG +L D + Sbjct: 2 DLTKEKRLWMYRKMYEIRRFELEVDRLFKANMIWGTCHLSVGEEATAVGAIAALEADDMI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G ++ AEL GR+ G +G+GGSMH+ + G G +GIVG V Sbjct: 62 TSTHRGHGHCIAKGGRLPQMFAELLGRETGYCRGRGGSMHIADIETGNLGANGIVGGGVP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + TG A A+K ++ K+ + FGDGA NQG +ES NIA+LW L V+Y+ ENN Y M + Sbjct: 122 IATGAALASKMKKDGKVTLCFFGDGANNQGVFHESLNIASLWRLPVVYLCENNLYGMSVA 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 SR++A N + R ++++PG VDG D+ AV + KAV R +GP +IE TYR+ Sbjct: 182 FSRSTAVKNVADRAAAYDMPGEIVDGNDVEAVYHVVKKAVERARRGEGPSLIEAKTYRWL 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS SD YRT+EEI E + PI++ R +L+ K A+E +L IE V + I +++E Sbjct: 242 GHSKSDANVYRTKEEIEEWKQKC-PIKRYRLKLVEEKIATEEELDRIEKEVEREIQDAIE 300 Query: 346 FAQSDKEP 353 +A++ EP Sbjct: 301 YAKNSPEP 308 >gi|229184994|ref|ZP_04312184.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BGSC 6E1] gi|228598469|gb|EEK56099.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BGSC 6E1] Length = 341 Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 187/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y+ ML IR+FE+K +L+ GM+ GF HL G+EAV VG+ LT+ D Sbjct: 19 NEITKEQARWMYKKMLEIRKFEDKVHELFAQGMLPGFVHLYAGEEAVAVGVCAHLTDSDS 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 79 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 138 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 139 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 198 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 199 TFEYASSCDSIAARAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRN 258 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 259 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSI 318 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 319 EFSENSPYPEDEELLKDVYV 338 >gi|118478137|ref|YP_895288.1| acetoin dehydrogenase (TPP-dependent) E1 component subunit alpha [Bacillus thuringiensis str. Al Hakam] gi|118417362|gb|ABK85781.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Bacillus thuringiensis str. Al Hakam] Length = 341 Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 187/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y+ ML IR+FE+K +L+ GM+ GF HL G+EAV VG+ LT+ D Sbjct: 19 NEITKEQARWMYKKMLEIRKFEDKVHELFAQGMLPGFVHLYAGEEAVAVGVCAHLTDSDS 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 79 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 138 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 139 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 198 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 199 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRN 258 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 259 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSI 318 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 319 EFSENSPYPEDEELLKDVYV 338 >gi|332878618|ref|ZP_08446338.1| pyruvate dehydrogenase E1 component, alpha subunit [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683519|gb|EGJ56396.1| pyruvate dehydrogenase E1 component, alpha subunit [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 332 Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 135/318 (42%), Positives = 194/318 (61%), Gaps = 2/318 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEG 102 + +F+KE L Y ML R+FE+K +Y V GF HL GQEAV G ++ Sbjct: 1 MKKFDKEVYLKWYEDMLFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVAAGCLHAIDPTK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MIT+YR H H + GVD +IMAEL G+ G S G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 DKMITSYRCHVHPIGLGVDPRRIMAELYGKGTGTSLGLGGSMHIFSKEHHFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q++LG G+AFA+K+ D + + GDGA QG +E+ N+A LW L V++++ENN YAM Sbjct: 121 QIALGAGLAFADKFLNRDGVTLTFMGDGAVRQGAFHETLNLAMLWKLPVVFIVENNHYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R + + K G+ + +P VDGM V + +AV R GP ++++ TY Sbjct: 181 GTSVERTANHVDIWKLGLGYEMPCQAVDGMHPETVAEAVYEAVERARRGDGPTLLDIRTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YRT+EE+ E + DPI V + K+A++ +L+ I+ V+ ++ Sbjct: 241 RYRGHSMSDAQHYRTKEEVEEYKKQ-DPITNVLSVIKDKKYATDAELEAIDERVKNLVAE 299 Query: 343 SVEFAQSDKEPDPAELYS 360 +FA+ P+ +Y Sbjct: 300 CEKFAEESPYPEHHIMYD 317 >gi|148910244|gb|ABR18203.1| unknown [Picea sitchensis] Length = 438 Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 129/323 (39%), Positives = 191/323 (59%), Gaps = 8/323 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +E+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L D + + Sbjct: 89 TREEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKMLKAHDSVCS 148 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A +M+EL G+ G +G+GGSMHMFS ++G GG +G + + Sbjct: 149 TYRDHVHALSKGVPARAVMSELFGKTTGCCRGQGGSMHMFSKEHGVLGGFAFIGEGIPVA 208 Query: 168 TGIAFANKYR-------RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 G AF++KY+ +++ + V FGDG N GQ +ES N+AALW L +I+V+ENN + Sbjct: 209 LGAAFSSKYKQEVLKDEKANAVTVAFFGDGTCNNGQFFESLNMAALWKLPIIFVVENNLW 268 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+G S RA++ + ++G +F +PG+ VDGMD+ V+ +AVA R GP ++E Sbjct: 269 AIGMSHIRATSVPDIWEKGPAFGMPGVHVDGMDVLKVREVAKEAVARARRGDGPTLVECE 328 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYR+RGHS++DP R E + DPI ++K L+ N A+E DLK IE + +II Sbjct: 329 TYRFRGHSLADPDELRNPAE-KAHYAARDPIVSLKKYLIENNLANESDLKSIEKKIDEII 387 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 +VEFA + P +L ++ Sbjct: 388 EEAVEFADASPLPQRGQLLENVF 410 >gi|332376063|gb|AEE63172.1| unknown [Dendroctonus ponderosae] Length = 391 Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 144/324 (44%), Positives = 200/324 (61%), Gaps = 15/324 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 SE K L Y+ M IR+ E QLY + GFCHL +GQEAV VG+ + D Sbjct: 47 TSELTKGDALRFYQQMDEIRKVENSIAQLYREKKIRGFCHLYVGQEAVAVGINSIMKPED 106 Query: 104 QMITAYREHGH-ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 +IT+YR HG +L C AS ++AEL G + G S+GKGGSMH++ + F+GG+GIVG+ Sbjct: 107 TVITSYRCHGWAVLKCESVAS-VIAELIGNKSGASRGKGGSMHIYGPQ--FFGGNGIVGS 163 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V LG GI ++Y + I V +GDGAANQGQV+E+FN+A L N+ V++V+ENNQY Sbjct: 164 HVPLGVGIGLKHRYLDNKAISVTLYGDGAANQGQVFEAFNLAKLLNIPVLFVVENNQYGP 223 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH----KGPIIIE 278 GT+ SR+SA + ++ SF +PG++ GMDI +V +A YC H KGPII+E Sbjct: 224 GTACSRSSANNEYYRQS-SF-LPGIRASGMDILSVI----EAAKYCFKHIQDGKGPIILE 277 Query: 279 MLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 M+TYRY GHSMSDP +YR R EI E+R D I +++ +L + A E ++K IE + Sbjct: 278 MMTYRYFGHSMSDPGTSYRDRSEIQEVREKKDCIHHLKQLILDSNLAKEDEIKAIENENK 337 Query: 338 KIINNSVEFAQSDKEPDPAELYSD 361 + + + E A P EL +D Sbjct: 338 EKVAKATEEAIKGSPPSLEELTAD 361 >gi|256818909|ref|YP_003140188.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Capnocytophaga ochracea DSM 7271] gi|256580492|gb|ACU91627.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Capnocytophaga ochracea DSM 7271] Length = 332 Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 135/318 (42%), Positives = 195/318 (61%), Gaps = 2/318 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEG 102 + +F+KE L Y ML R+FE+K +Y V GF HL GQEAV G ++ Sbjct: 1 MKKFDKEVYLKWYEDMLFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVAAGCLHAIDPTK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MIT+YR H H + GVD +IMAEL G+ G S G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 DKMITSYRCHVHPIGLGVDPKRIMAELYGKGTGTSLGLGGSMHIFSKEHHFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q++LG G+AFA+KY + + + GDGA QG +E+ N+A LW L V++++ENN YAM Sbjct: 121 QIALGAGLAFADKYFNREAVTLTFMGDGAVRQGAFHETMNMAMLWKLPVVFIVENNHYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R + + K G+ + +P VDGM V + +AV R +GP ++++ TY Sbjct: 181 GTSVERTANHVDIWKLGLGYQMPCQPVDGMHPETVAEAVYEAVERARRGEGPTLLDIRTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YRT+EE+ E + DPI V + K+A++ +L+ I+ V++ + Sbjct: 241 RYRGHSMSDAQHYRTKEEVEEYKKQ-DPITNVLAVIKEKKYATDAELEAIDERVKERVAE 299 Query: 343 SVEFAQSDKEPDPAELYS 360 +FA+ P+ +Y Sbjct: 300 CEKFAEESPYPETHIMYD 317 >gi|225849316|ref|YP_002729480.1| dehydrogenase complex, E1 component, alpha subunit [Sulfurihydrogenibium azorense Az-Fu1] gi|225643447|gb|ACN98497.1| putative dehydrogenase complex, E1 component, alpha subunit [Sulfurihydrogenibium azorense Az-Fu1] Length = 319 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 138/316 (43%), Positives = 193/316 (61%), Gaps = 9/316 (2%) Query: 50 EQELSA--YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 EQ L+ Y M L R FE +A + Y G +GGF HL IG+EAV VG ++ +GD + Sbjct: 2 EQSLAEKFYYFMKLGRVFELRAKEEYMKGNIGGFLHLAIGEEAVHVGATIAFDKGD-IFV 60 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H + LA G+D +MAEL G++ GISKGKGGSMH + FYGG+ IVGA + Sbjct: 61 HYRDHVYALAKGIDPKYLMAELFGKKTGISKGKGGSMHFYEPSLNFYGGNAIVGAHIPHS 120 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+A+A K++ + +V FGDGA N G YES N+A+LW L V+++ ENN YA+GT + Sbjct: 121 VGMAYARKFKGENTGVLVAFGDGATNAGNFYESLNLASLWKLPVLFLCENNYYAIGTRID 180 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RASA T+ + + + Q+DGMDI V + +A Y + P IE +TYRY H Sbjct: 181 RASAITDIYLKAKPYML-SKQIDGMDIFEVYKAVKEAKEYIQEESKPYFIEAITYRYEPH 239 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSD NYR+ E+ E+ + DPIE+++K L SE + I+ V K I +VEFA Sbjct: 240 SMSDTGNYRSVREL-EIAKSKDPIEKLKKSGL----LSENYINYIDNLVEKEIEEAVEFA 294 Query: 348 QSDKEPDPAELYSDIL 363 ++ EP+ ELY+D+ Sbjct: 295 KNSPEPEEIELYTDVF 310 >gi|322370751|ref|ZP_08045307.1| 2-oxoacid dehydrogenase E1 component alpha subunit [Haladaptatus paucihalophilus DX253] gi|320549709|gb|EFW91367.1| 2-oxoacid dehydrogenase E1 component alpha subunit [Haladaptatus paucihalophilus DX253] Length = 344 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 128/309 (41%), Positives = 183/309 (59%), Gaps = 1/309 (0%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 A R ML IR F+ KAG+L+G G + GF HL IG+EAV VG +L E D + + +R HGH Sbjct: 15 ALRRMLTIRAFDTKAGELFGDGELPGFVHLYIGEEAVGVGACAALEEDDYITSTHRGHGH 74 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +A G+D ++MAEL G+ G GKGGSMH+ G G +GIVGA L TG A + Sbjct: 75 CIAKGLDLERMMAELYGKANGYCNGKGGSMHIADVDAGMLGANGIVGAGPPLATGAALTS 134 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + + D + + FGDGA QGQ++E+ N+AA WNL ++++ENNQ+ GT V + N Sbjct: 135 QVKGEDTVALAFFGDGAVAQGQIHEAINLAATWNLPAVFLVENNQFGEGTPVEKQHNLQN 194 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S+ ++NIPG VDGMD+ AV + +A +GP IE TYRYRGH D Sbjct: 195 LSETAEAYNIPGFTVDGMDVTAVFEAVKEARKRAVDREGPTFIEADTYRYRGHFEGDQQP 254 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT E+I+ + N D IE ++RL+ +E + +E+E ++ + + + A+ PD Sbjct: 255 YRTDEDIDLWKEN-DAIESFKERLIDAGTITESEFEEMEADISAQVEEAAKNAKEADYPD 313 Query: 355 PAELYSDIL 363 P E Y D+ Sbjct: 314 PNEAYDDMF 322 >gi|163733708|ref|ZP_02141150.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Roseobacter litoralis Och 149] gi|161392819|gb|EDQ17146.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Roseobacter litoralis Och 149] Length = 335 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 128/324 (39%), Positives = 195/324 (60%), Gaps = 5/324 (1%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 + + ++ ++ A R M LIR+FEE A Y G++ G HL IGQEA VG MSL++ Sbjct: 9 YAIRTYDADELKGALRKMFLIRKFEEGAEDSYTRGLIHGTMHLSIGQEASAVGSCMSLSD 68 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D++ + +R HGH +A G D ++ AE G++ G +G+GGSMH+ G G +GIVG Sbjct: 69 DDKITSTHRGHGHCVAKGADLGRMFAEFFGKEDGYCRGRGGSMHIADVAKGNLGANGIVG 128 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 + + G A + K + + V FGDGA N+G +E+ N+AA+W L V++V ENN+Y Sbjct: 129 GGLPIAVGAALSAKRLGTGAVTVCFFGDGANNEGAFHEALNMAAIWKLPVVFVCENNRYG 188 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 M TS +++A + ++R ++N+PG+ VDG D AV +D AVA RA GP ++E LT Sbjct: 189 MSTSTEKSTAVKHIAERAAAYNMPGVTVDGNDFSAVTEAVDSAVARARAGDGPSLVENLT 248 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR+RGHS SD YRT+EEI + DPI Q+ L+ +K SE D+ +E ++I Sbjct: 249 YRWRGHSKSDRNRYRTKEEIADWM-ERDPIGQMSALLVTHKIMSENDVAALESETEQVIQ 307 Query: 342 NSVEFAQSDKEPDPAE----LYSD 361 +++ FA + P A+ +Y+D Sbjct: 308 DAIAFANASPSPAVADATRFVYTD 331 >gi|225453620|ref|XP_002267676.1| PREDICTED: similar to putative pyruvate dehydrogenase E1 alpha subunit [Vitis vinifera] gi|296089009|emb|CBI38712.3| unnamed protein product [Vitis vinifera] Length = 433 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 124/322 (38%), Positives = 190/322 (59%), Gaps = 7/322 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +E+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L + D +++ Sbjct: 85 TREEGLELYEDMVLGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDCVVS 144 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A +M+EL G+ G +G+GGSMHMFS ++ GG +G + + Sbjct: 145 TYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNVLGGFAFIGEGIPVA 204 Query: 168 TGIAFANKYRRS------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 TG AF +KY+R D++ + FGDG N GQ +E N+A+LW L +++V+ENN +A Sbjct: 205 TGAAFTSKYKREVLKEDCDEVTLAFFGDGTCNNGQFFECLNMASLWKLPIVFVVENNLWA 264 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 +G S RA++ K+G +F +PG VDGMD+ V+ +A+ R +GP ++E T Sbjct: 265 IGMSHLRATSDPEIWKKGPAFGMPGFHVDGMDVLKVREVAKEAIQRARRGEGPTLVECET 324 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR+RGHS++DP R E + DP+ ++K + NK ASE +LK IE + +++ Sbjct: 325 YRFRGHSLADPDELRDPAE-KAHYAARDPLTALKKYIFDNKLASEAELKAIEKKIDEVVE 383 Query: 342 NSVEFAQSDKEPDPAELYSDIL 363 SVEFA + P ++L ++ Sbjct: 384 ESVEFADASPPPPRSQLLENVF 405 >gi|229161648|ref|ZP_04289628.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus R309803] gi|228621893|gb|EEK78739.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus R309803] Length = 332 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 187/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++A+ R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAIERARNGGGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVHFRKHLIHEALLTESELVDMEKAVDEAVQKSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ AEL D+ + Sbjct: 310 EFSENSPYPEDAELLKDVYV 329 >gi|146321687|ref|YP_001201398.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Streptococcus suis 98HAH33] gi|145692493|gb|ABP92998.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Streptococcus suis 98HAH33] Length = 337 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 132/327 (40%), Positives = 196/327 (59%), Gaps = 3/327 (0%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 LE VS KEQ L + M IR + K +L G V G H +G+EA VG Sbjct: 12 LEEIMVS-ITKEQHLDMFLKMQQIRDVDMKLNKLVRRGFVQGMTHFSVGEEAAAVGPIAG 70 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 LT+ D + + +R HGH++A G+D + +MAEL G+ G SKG+GGSMH+ + + G +G +G Sbjct: 71 LTDEDIIFSHHRGHGHVIAKGIDINGMMAELAGKATGTSKGRGGSMHLANVEKGNFGSNG 130 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG +L G A +Y +D I + GD A N+G +ES N+AA+WNL VI+ I NN Sbjct: 131 IVGGGYALAVGAALTQQYLGTDNIVIAFSGDSATNEGSFHESMNLAAVWNLPVIFFITNN 190 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIII 277 +Y M T +S ++ + +R ++ IPG V DG D+ AV M + + Y RA KGP ++ Sbjct: 191 RYGMSTDISYSTKIPHLYQRAAAYGIPGHYVEDGNDVIAVYEKMQEVIEYVRAGKGPAMV 250 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E+ +YR+ GHS +D YRT+EE+NE ++ DP+++ RK L NK A++ +L IE V Sbjct: 251 EVESYRWFGHSTADAGVYRTKEEVNEWKAK-DPLKKYRKYLTENKIATDEELDAIEAQVA 309 Query: 338 KIINNSVEFAQSDKEPDPAELYSDILI 364 + + SV+FAQ +PD + Y D+ + Sbjct: 310 EQVEASVKFAQESPDPDISVAYEDVFV 336 >gi|251772554|gb|EES53120.1| dehydrogenase, E1 component [Leptospirillum ferrodiazotrophum] Length = 680 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 133/324 (41%), Positives = 185/324 (57%), Gaps = 34/324 (10%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+L R FEE+A Y G +GGF HL G+EA+ G+ + GD ++ YREH H L Sbjct: 13 MILARAFEERAAMEYSRGRIGGFLHLYPGEEAIATGVIRAAEPGDYLVATYREHVHALVR 72 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ +IMAEL G+ GI +G GGSMH+F + F GG+GIVG + G+A+A RR Sbjct: 73 GIPPERIMAELFGKATGICQGMGGSMHLFDRERRFMGGYGIVGETFPVAIGLAYAIACRR 132 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + V FGDGA NQG +ES N+AALWNL +++V ENN+Y +GT + R SA T+ +R Sbjct: 133 LPEAVVCFFGDGAVNQGTFHESLNMAALWNLPILFVCENNRYQIGTEIRRHSAVTDVYRR 192 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 +++IPG Q+DGMD+ AV +A+A R+ GP+++E LTYRYRGHSM+DP YR Sbjct: 193 ASAYHIPGHQLDGMDVLAVHTAAGEALATIRSGGGPVLLECLTYRYRGHSMADPGTYRPA 252 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASE---------------------------GD--L 329 +EI R+ DP+ LL N S+ GD L Sbjct: 253 QEIAAWRAR-DPLTP----LLENPSGSDPATASPGPSAPDALARFSDHCLACGAVGDATL 307 Query: 330 KEIEMNVRKIINNSVEFAQSDKEP 353 + I V+ + +V FA++ EP Sbjct: 308 RAIHEEVKDRVEAAVAFAETSPEP 331 >gi|288573245|ref|ZP_06391602.1| Pyruvate dehydrogenase (acetyl-transferring) [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568986|gb|EFC90543.1| Pyruvate dehydrogenase (acetyl-transferring) [Dethiosulfovibrio peptidovorans DSM 11002] Length = 334 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 123/321 (38%), Positives = 193/321 (60%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V +++++ + YR M+ IR FE+K + G + GF HL IG+E + G+ +LT+ D Sbjct: 14 VKDYDRDLLIELYRKMVSIRLFEQKVEHHFLAGDIPGFVHLYIGEEGIGTGVMANLTKED 73 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A G D +++MAE+ G++ G KGKGGSMH+ G G +GIVG Sbjct: 74 YIESTHRGHGHTIAKGADLNRMMAEIFGKKTGYCKGKGGSMHIADFSVGMLGANGIVGGG 133 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A A+K R +I VV FGDGA+N+G +E+ N+AA W L V++V ENN++A Sbjct: 134 YTLAVGAALASKLREDGRISVVFFGDGASNRGTFHEALNMAAAWKLPVLFVCENNEWAST 193 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T ++ + + R + IPG VDG D+ +V T + V Y R+ GP+++E TYR Sbjct: 194 TPYLTTTSVADIADRAQGYGIPGYMVDGNDVLSVYETSKEVVDYIRSGNGPVLLECKTYR 253 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +GH + DP YRT+EE+ E+ N++PI + +++L S DL + + V I + Sbjct: 254 IKGHFVGDPEKYRTKEEVQEVFDNNNPINRFEEKVLEAGVLSREDLDAVYVEVETAIEEA 313 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V +A EPDP+EL+ D+ + Sbjct: 314 VRYALESPEPDPSELFDDLYV 334 >gi|320353607|ref|YP_004194946.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Desulfobulbus propionicus DSM 2032] gi|320122109|gb|ADW17655.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Desulfobulbus propionicus DSM 2032] Length = 324 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 129/303 (42%), Positives = 185/303 (61%), Gaps = 1/303 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 NK+Q L R MLLIRRFEEK+ +LY + GF HL IG+EAV VG+ +L+ D ++ Sbjct: 4 LNKDQALHHLRQMLLIRRFEEKSAELYSAMKIRGFLHLYIGEEAVAVGVMAALSPEDAVV 63 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YREHG LA G+ A+ IMAE+ G+ G +G+GGSMH+F FYGG+ IVG + L Sbjct: 64 ATYREHGQALARGMSANAIMAEMYGKVEGCCRGRGGSMHLFDATTRFYGGNAIVGGGLPL 123 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A A+ + ++ FGDGA +G +ES N+AALW L V++V ENN YAMGT++ Sbjct: 124 AVGLALADHMQGRQRVTSCFFGDGAVAEGYFHESMNLAALWKLPVLFVCENNLYAMGTAL 183 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A + + +G ++ + VDGMD++AV+ AVA+ +A GP ++E TYR+R Sbjct: 184 RYTEANQDIAAKGAAYGMAEAAVDGMDVQAVEKAARAAVAHIQAGNGPYLLECRTYRFRP 243 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSM D YRT+EE+ + + DPIE + RL +E + +E V + SV F Sbjct: 244 HSMFDTELYRTKEEVEQWK-QRDPIELLAGRLREAGLFTEAEQVALEREVAAEVEASVAF 302 Query: 347 AQS 349 A++ Sbjct: 303 AEA 305 >gi|24214710|ref|NP_712191.1| pyruvate dehydrogenase subunit alpha [Leptospira interrogans serovar Lai str. 56601] gi|45657760|ref|YP_001846.1| pyruvate dehydrogenase alpha2 subunit protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24195701|gb|AAN49209.1| pyruvate dehydrogenase alpha subunit [Leptospira interrogans serovar Lai str. 56601] gi|45601000|gb|AAS70483.1| pyruvate dehydrogenase alpha2 subunit protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 327 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 134/307 (43%), Positives = 202/307 (65%), Gaps = 2/307 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLLIRRFEE A + Y G +GGFCHL IGQEAV VG +L E D +++ YR+HGH Sbjct: 18 YRQMLLIRRFEEGAAKSYSTGKIGGFCHLYIGQEAVGVGSIAALKEQDYIVSTYRDHGHA 77 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G+D +MAEL G++ GIS G GGSMH F F GGHGIVG +SL GIA+A+K Sbjct: 78 LARGLDPKALMAELFGKRTGISSGYGGSMHFFDKNKRFMGGHGIVGGHISLAAGIAYASK 137 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y+ + + + FG+GAAN G +E N+AA+W L ++ + ENN YAMGT R+ + + Sbjct: 138 YKNENSVTICFFGEGAANIGSFHEGMNLAAIWKLPLVMICENNHYAMGTPEYRSLSVKDV 197 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 S R +++I ++G ++R V+ + AV R +GP ++E+ TYR+RGHSMSDPA Y Sbjct: 198 SVRATAYDIARDHIEGDEVRKVRDHVSVAVERARRGEGPTLMEISTYRFRGHSMSDPAKY 257 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RT+EE++ + + DP+ + + L+H++ E +L++++++++ + +++ FA +EP Sbjct: 258 RTKEELDRYKKS-DPLLKAKDDLIHSE-WKEEELEKLDIDIQAQVEDAIVFADKSEEPPL 315 Query: 356 AELYSDI 362 LY + Sbjct: 316 GWLYKHV 322 >gi|134102126|ref|YP_001107787.1| pyruvate dehydrogenase (lipoamide) [Saccharopolyspora erythraea NRRL 2338] gi|291007622|ref|ZP_06565595.1| pyruvate dehydrogenase (lipoamide) [Saccharopolyspora erythraea NRRL 2338] gi|133914749|emb|CAM04862.1| pyruvate dehydrogenase (lipoamide) [Saccharopolyspora erythraea NRRL 2338] Length = 344 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 129/304 (42%), Positives = 186/304 (61%), Gaps = 1/304 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 ++ M LIRRFEE+A Q Y +GG+CHL +G+EA +VG+ +L + D + T YREHG+ Sbjct: 21 FQQMTLIRRFEERAAQGYTQAKIGGYCHLNLGEEATVVGLMTALRKTDILFTNYREHGYA 80 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G++ ++MAEL GR G SKG GGSMHMF + G GG+GIVG Q+ L TG A A Sbjct: 81 IAKGIEPGRVMAELYGRTTGTSKGWGGSMHMFDVEAGLLGGYGIVGGQIPLATGAALAID 140 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 YR D++ + GDG N G +ES NIAALWNL V++V+ NN MGT+V ++SA++ Sbjct: 141 YRGGDQVVMCQMGDGTTNIGAFHESLNIAALWNLPVVFVVINNYLGMGTTVEKSSAESEL 200 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 KR V++N+ G +VDG D+ AV+ + V R P ++E + R +GHS+ DPA Y Sbjct: 201 YKRAVAYNMHGERVDGNDVLAVRDVATRLVERARETGAPALLEATSQRLKGHSVVDPAKY 260 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R+ E+ + R+ DP+ R +L+ E EIE + + +V FA PD Sbjct: 261 RSEEDNAKARAA-DPVFNFRAQLIEAGVLDEDGAAEIEQKAQADADAAVAFADDSPHPDV 319 Query: 356 AELY 359 + L+ Sbjct: 320 STLF 323 >gi|302837967|ref|XP_002950542.1| hypothetical protein VOLCADRAFT_104783 [Volvox carteri f. nagariensis] gi|300264091|gb|EFJ48288.1| hypothetical protein VOLCADRAFT_104783 [Volvox carteri f. nagariensis] Length = 431 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 130/321 (40%), Positives = 198/321 (61%), Gaps = 14/321 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M+L R FEE Q+Y G + GF HL GQEAV G+ L D +++ YR+H H Sbjct: 75 YYDMVLGREFEEMCAQMYYRGKMFGFVHLYSGQEAVSSGVIRLLRPDDHVVSTYRDHVHA 134 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L+ GV A ++MAEL G++ G +G+GGSMHMFS+K+ GG+ +G + +G G AF +K Sbjct: 135 LSKGVSAREVMAELFGKKTGCCRGQGGSMHMFSSKHNVLGGYAFIGEGIPVGLGAAFQSK 194 Query: 176 YRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 YRR +D + FGDG N GQ YES N+AAL+ L I+V+ENN +A+G S R Sbjct: 195 YRRDVLGDESADSVTCSFFGDGTCNVGQFYESLNMAALYKLPHIFVVENNLWAIGMSHLR 254 Query: 229 ASAQTN------FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 A+++T+ K+G +F +PG+ VDGMD+ V+ +AV R +GP +IE TY Sbjct: 255 ATSRTSGDEHPYIYKKGPAFGMPGVLVDGMDVLKVRQVAQEAVERARRGEGPTLIEAETY 314 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+RGHS++DP R+++E + + DPI Q++K +L + A+E D+K +E V +++ + Sbjct: 315 RFRGHSLADPDELRSKDEKAKYLAR-DPIPQLKKYMLEHGLATEADIKALEDKVAEVVED 373 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 V+FA +P+ +L ++ Sbjct: 374 CVKFADESPKPERGQLLENVF 394 >gi|226226156|ref|YP_002760262.1| pyruvate dehydrogenase E1 component alpha subunit [Gemmatimonas aurantiaca T-27] gi|226089347|dbj|BAH37792.1| pyruvate dehydrogenase E1 component alpha subunit [Gemmatimonas aurantiaca T-27] Length = 347 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 133/308 (43%), Positives = 194/308 (62%), Gaps = 3/308 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLL RRFEE+ ++Y +G +GGFCHL IGQEAV G+ L D +IT YR+HG LA Sbjct: 37 MLLQRRFEERCAEMYAIGRIGGFCHLYIGQEAVSTGVIAQLRSDDYIITTYRDHGQALAR 96 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ +M+EL GRQ G +KGKGGSMHMF + GF GGHGIVG V + G+ FA KYR Sbjct: 97 GMTPRAVMSELFGRQDGCAKGKGGSMHMFDKQLGFLGGHGIVGGHVPMAAGVGFAIKYRG 156 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 D++ G+ N G +E+ N+AALW L +++IENN+Y MGT++ RAS+ + KR Sbjct: 157 GDQVIACFMGESVVNTGAFHEALNMAALWKLPCVFIIENNRYGMGTALERASSIHDIYKR 216 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN--YR 296 G S+++P VDG D+ AV+ M +++ R P ++E+ TYR+ GHSMSD + YR Sbjct: 217 GASYDMPRDVVDGQDVLAVRKAMAESIERARKESMPTLLEIRTYRFMGHSMSDAVSGTYR 276 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 T+EE+ E DPI R+R+ + ++ ++ ++K++ +S++FA++ E Sbjct: 277 TKEEL-EQYLKRDPIVLHRQRMEDAGEITADEITAMDEEIKKLVQDSIDFAEASPELPLE 335 Query: 357 ELYSDILI 364 L DIL+ Sbjct: 336 ALMEDILV 343 >gi|30262748|ref|NP_845125.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Ames] gi|47528068|ref|YP_019417.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49185595|ref|YP_028847.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Sterne] gi|165869114|ref|ZP_02213774.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0488] gi|167632100|ref|ZP_02390427.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0442] gi|167637912|ref|ZP_02396191.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0193] gi|170685404|ref|ZP_02876628.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0465] gi|170704617|ref|ZP_02895083.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0389] gi|177649295|ref|ZP_02932297.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0174] gi|190565430|ref|ZP_03018350.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis Tsiankovskii-I] gi|227814412|ref|YP_002814421.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. CDC 684] gi|229602309|ref|YP_002867055.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0248] gi|254685340|ref|ZP_05149200.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. CNEVA-9066] gi|254722748|ref|ZP_05184536.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A1055] gi|254737796|ref|ZP_05195499.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Western North America USA6153] gi|254743030|ref|ZP_05200715.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Kruger B] gi|254752110|ref|ZP_05204147.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Vollum] gi|254760631|ref|ZP_05212655.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Australia 94] gi|30257380|gb|AAP26611.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Ames] gi|47503216|gb|AAT31892.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49179522|gb|AAT54898.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Sterne] gi|164715840|gb|EDR21357.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0488] gi|167514461|gb|EDR89828.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0193] gi|167532398|gb|EDR95034.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0442] gi|170130418|gb|EDS99279.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0389] gi|170670764|gb|EDT21503.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0465] gi|172084369|gb|EDT69427.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0174] gi|190563457|gb|EDV17422.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis Tsiankovskii-I] gi|227005811|gb|ACP15554.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. CDC 684] gi|229266717|gb|ACQ48354.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0248] Length = 332 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 186/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQKSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 310 EFSENSPYPEDEELLKDVYV 329 >gi|65320075|ref|ZP_00393034.1| COG1071: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Bacillus anthracis str. A2012] Length = 341 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 186/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 19 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 79 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 138 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 139 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 198 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 199 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRN 258 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 259 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQKSI 318 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 319 EFSENSPYPEDEELLKDVYV 338 >gi|228915378|ref|ZP_04078971.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228844321|gb|EEM89379.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 341 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 186/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 19 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 79 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 138 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 139 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 198 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 199 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRN 258 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 259 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQKSI 318 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 319 EFSENSPYPEDEELLKDVYV 338 >gi|229110225|ref|ZP_04239799.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock1-15] gi|228673211|gb|EEL28481.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock1-15] Length = 332 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAATEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ PD EL D+ + Sbjct: 310 EFSENSPYPDDEELLKDVYV 329 >gi|74316673|ref|YP_314413.1| dehydrogenase complex, E1 component subunit alpha [Thiobacillus denitrificans ATCC 25259] gi|74056168|gb|AAZ96608.1| dehydrogenase complex, E1 component, alpha subunit [Thiobacillus denitrificans ATCC 25259] Length = 333 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 136/316 (43%), Positives = 185/316 (58%), Gaps = 3/316 (0%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITA 108 E + R M+L RRFEE+ Q Y +GGF HL GQEA G+ + G D +IT Sbjct: 4 EDKKRVLREMVLHRRFEERCYQAYIERKIGGFLHLYPGQEACCNGVMEAARPGHDYVITG 63 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+H H + CG D ++MAEL G++ G SKG+GGSMH+F F GG+ +VG L Sbjct: 64 YRDHVHAIKCGADPKEVMAELYGKETGSSKGRGGSMHIFDAGKRFMGGYALVGGPFPLAA 123 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 GIA A + + D+I + GD A NQG +E+ N+AALW L V++V ENN Y +GTS+ R Sbjct: 124 GIAKAIQLKGGDEIAICFLGDAANNQGTFHETMNMAALWKLPVLFVCENNLYGIGTSIER 183 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++A + KR ++NIP + DG DI V KAV + RA GP +E++TYRYRGHS Sbjct: 184 STAVVHQHKRVAAYNIPADECDGQDIEVVYEHARKAVDHVRAGNGPFFLELMTYRYRGHS 243 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV-EFA 347 MSD YRTREE E+ DPI +R RL+ + + + +E I N V +FA Sbjct: 244 MSDSRGYRTREE-EELWKQRDPIFILRDRLIKEGATTMAEFEALEKETDAYIENEVIKFA 302 Query: 348 QSDKEPDPAELYSDIL 363 ++ EP EL +L Sbjct: 303 EASPEPSVDELEKYVL 318 >gi|307105310|gb|EFN53560.1| hypothetical protein CHLNCDRAFT_32109 [Chlorella variabilis] Length = 348 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 198/320 (61%), Gaps = 16/320 (5%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG-MKMSLTEGDQMITAYREHGHILA 117 M+L R FEE Q+Y G + GF HL GQEAV G +K L + D + + YR+H H L+ Sbjct: 1 MVLGREFEEMCAQMYYRGKMFGFVHLYSGQEAVSTGVIKACLRKDDFISSTYRDHVHALS 60 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 GV A K+MAEL G++ G+S+G+GGSMH+F ++G GG+ +G + +G G A+ Y Sbjct: 61 KGVSARKVMAELFGKKTGVSRGQGGSMHLFDREHGLLGGYAFIGEGIPIGLGAAYQVAYS 120 Query: 178 R-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 R D++ V FGDG N GQ YES N+A L+ L I+V+ENN++A+G + RA+ Sbjct: 121 RRVLGNESDDRVAVNFFGDGTCNVGQFYESLNMATLYKLPCIFVVENNKWAIGMNHPRAT 180 Query: 231 AQTNFS-------KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 A + + K+G +F +PG+ VDGMD+ V+ +AV R +GP +IE TYR Sbjct: 181 APSGIADNEPWIYKKGPAFGMPGVHVDGMDVMKVREVAMEAVERARRGEGPTLIEAETYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHS++DP R +EE E + DPI Q K ++ N A+E D+K +E V++++++ Sbjct: 241 YRGHSLADPDELRRKEE-KEHYAARDPIPQFAKYMVANGLATESDIKALEAKVKEVVDDC 299 Query: 344 VEFAQSDKEPDPAELYSDIL 363 VE+A++ +PD ++L ++ Sbjct: 300 VEYAENSPKPDMSQLLENVF 319 >gi|300118738|ref|ZP_07056464.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Bacillus cereus SJ1] gi|298723895|gb|EFI64611.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Bacillus cereus SJ1] Length = 332 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDDAVQKSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 310 EFSENSPYPEDEELLKDVYV 329 >gi|146319495|ref|YP_001199207.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Streptococcus suis 05ZYH33] gi|145690301|gb|ABP90807.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Streptococcus suis 05ZYH33] gi|292559113|gb|ADE32114.1| Pyruvate dehydrogenase [Streptococcus suis GZ1] Length = 337 Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 131/327 (40%), Positives = 196/327 (59%), Gaps = 3/327 (0%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 LE VS KEQ L + M IR + K +L G V G H +G+EA VG Sbjct: 12 LEEIMVS-ITKEQHLDMFLKMQQIRDVDMKLNKLVRRGFVQGMTHFSVGEEAAAVGPIAG 70 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 LT+ D + + +R HGH++A G+D + +MAEL G+ G SKG+GGSMH+ + + G +G +G Sbjct: 71 LTDEDIIFSHHRGHGHVIAKGIDINGMMAELAGKATGTSKGRGGSMHLANVEKGNFGSNG 130 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG +L G A +Y +D I + GD A N+G +ES N+AA+WNL VI+ I NN Sbjct: 131 IVGGGYALAVGAALTQQYLGTDNIVIAFSGDSATNEGSFHESMNLAAVWNLPVIFFITNN 190 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIII 277 +Y + T +S ++ + +R ++ IPG V DG D+ AV M + + Y RA KGP ++ Sbjct: 191 RYGISTDISYSTKIPHLYQRAAAYGIPGHYVEDGNDVIAVYEKMQEVIEYVRAGKGPAMV 250 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E+ +YR+ GHS +D YRT+EE+NE ++ DP+++ RK L NK A++ +L IE V Sbjct: 251 EVESYRWFGHSTADAGVYRTKEEVNEWKAK-DPLKKYRKYLTENKIATDEELDAIEAQVA 309 Query: 338 KIINNSVEFAQSDKEPDPAELYSDILI 364 + + SV+FAQ +PD + Y D+ + Sbjct: 310 EQVEASVKFAQESPDPDISVAYEDVFV 336 >gi|253752506|ref|YP_003025647.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus suis SC84] gi|253754332|ref|YP_003027473.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus suis P1/7] gi|253756266|ref|YP_003029406.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus suis BM407] gi|251816795|emb|CAZ52438.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus suis SC84] gi|251818730|emb|CAZ56566.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus suis BM407] gi|251820578|emb|CAR47334.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus suis P1/7] gi|319758915|gb|ADV70857.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Streptococcus suis JS14] Length = 322 Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 127/318 (39%), Positives = 192/318 (60%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KEQ L + M IR + K +L G V G H +G+EA VG LT+ D + + Sbjct: 5 TKEQHLDMFLKMQQIRDVDMKLNKLVRRGFVQGMTHFSVGEEAAAVGPIAGLTDEDIIFS 64 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH++A G+D + +MAEL G+ G SKG+GGSMH+ + + G +G +GIVG +L Sbjct: 65 HHRGHGHVIAKGIDINGMMAELAGKATGTSKGRGGSMHLANVEKGNFGSNGIVGGGYALA 124 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A +Y +D I + GD A N+G +ES N+AA+WNL VI+ I NN+Y + T +S Sbjct: 125 VGAALTQQYLGTDNIVIAFSGDSATNEGSFHESMNLAAVWNLPVIFFITNNRYGISTDIS 184 Query: 228 RASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ++ + +R ++ IPG V DG D+ AV M + + Y RA KGP ++E+ +YR+ G Sbjct: 185 YSTKIPHLYQRAAAYGIPGHYVEDGNDVIAVYEKMQEVIEYVRAGKGPAMVEVESYRWFG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS +D YRT+EE+NE ++ DP+++ RK L NK A++ +L IE V + + SV+F Sbjct: 245 HSTADAGVYRTKEEVNEWKAK-DPLKKYRKYLTENKIATDEELDAIEAQVAEQVEASVKF 303 Query: 347 AQSDKEPDPAELYSDILI 364 AQ +PD + Y D+ + Sbjct: 304 AQESPDPDISVAYEDVFV 321 >gi|229024269|ref|ZP_04180728.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH1272] gi|228737044|gb|EEL87580.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH1272] Length = 332 Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLNKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEREVDDAVQKSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 310 EFSENSPYPEDEELLKDVYV 329 >gi|262196892|ref|YP_003268101.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Haliangium ochraceum DSM 14365] gi|262080239|gb|ACY16208.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Haliangium ochraceum DSM 14365] Length = 334 Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 134/307 (43%), Positives = 187/307 (60%), Gaps = 1/307 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ L YR ML IRR EE A + Y G +GGF HL IGQE V VG +L + D ++ Sbjct: 20 TKEELLPLYRQMLAIRRLEEAAAKAYSQGKIGGFLHLVIGQEPVCVGAVAALQDDDYVVA 79 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YREHGH A G+ A IMAEL G++ G+ KG GGSMH F F GGHGIVG V L Sbjct: 80 TYREHGHAYARGISARAIMAELYGKKTGVVKGLGGSMHFFDKSKNFLGGHGIVGGHVPLA 139 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G AF ++Y ++ V FGDG+A G E +A LW L ++ + ENNQY+MGT + Sbjct: 140 AGAAFKSRYTEDGRVTVCFFGDGSATIGGFAEGAALAGLWQLPLVLICENNQYSMGTPLK 199 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R+ A T+ S+R ++N+ + +G D+ VK + +A+ R P +IE+LTYR+RGH Sbjct: 200 RSMANTDISQRADAYNLARDRFEGDDVLEVKHRVGQAIKRARDEGRPTLIEILTYRFRGH 259 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDP YRT+EE++E R DPI+ R L+ E ++K++E +++ + ++V FA Sbjct: 260 SMSDPGLYRTKEEVSE-RRERDPIKTSRAVLIDECGVDEDEIKKLEAEIKEEVADAVRFA 318 Query: 348 QSDKEPD 354 + E D Sbjct: 319 EESPEAD 325 >gi|51245948|ref|YP_065832.1| pyruvate dehydrogenase E1 component, alpha subunit [Desulfotalea psychrophila LSv54] gi|50876985|emb|CAG36825.1| probable pyruvate dehydrogenase E1 component, alpha subunit [Desulfotalea psychrophila LSv54] Length = 335 Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 128/291 (43%), Positives = 190/291 (65%), Gaps = 1/291 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ IRRFEEKA +LY + GF HL IG+EAV G+ +L D + YREHG+ LA Sbjct: 26 MVRIRRFEEKAAELYTKMKIRGFLHLYIGEEAVAAGVSAALEPEDASVGTYREHGNALAR 85 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ A IMAE+ G+Q G S+G+GGSMH+F K FYGG+ IVG + L G+A A+K + Sbjct: 86 GISAGAIMAEMYGKQEGCSRGRGGSMHIFDDKTRFYGGNAIVGGGLPLAVGLALADKMQG 145 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ FGDGA ++G+ +ES N+AALWNL V+++ ENN YAMGT++ R+ + T+ +++ Sbjct: 146 KKRVTCCFFGDGAVSEGEFHESMNLAALWNLPVLFICENNLYAMGTALERSQSVTDLTRK 205 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 VS+ I VDGMD+ AV+A ++AV R+ + P +E TYR+R HSM DP YR++ Sbjct: 206 AVSYRIAASAVDGMDVLAVEAAANEAVNAVRSGQKPYFLECRTYRFRAHSMFDPELYRSK 265 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 E+++ + PI+ KRL S+GD++++E V + I +V FA++ Sbjct: 266 AEVDKWKKRC-PIDSFVKRLKKQDLLSDGDMEKLERQVAREIEEAVAFAEN 315 >gi|227820169|ref|YP_002824140.1| acetoin dehydrogenase TPP-dependent subunit alpha [Sinorhizobium fredii NGR234] gi|227339168|gb|ACP23387.1| acetoin dehydrogenase TPP-dependent alpha chain [Sinorhizobium fredii NGR234] Length = 344 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 131/329 (39%), Positives = 192/329 (58%), Gaps = 4/329 (1%) Query: 25 RAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 RA D ++PF+ ++N+EQ L A R M LIRRFEE A + Y G++ G HL Sbjct: 6 RAMQVESDTSNLPFI----YRQYNREQLLDALRKMHLIRRFEEGAEECYMRGLIHGTMHL 61 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 IGQEA +G+ M L DQ+ + +R HGH +A D ++ AE G+ G G+GGSM Sbjct: 62 SIGQEASAMGICMPLVNEDQITSTHRGHGHCIAKDADVKRMFAEFFGKTTGYCAGRGGSM 121 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 H+ G G +GIVG + + G A K R+ K+ V FGDGA N+G +E+ N+A Sbjct: 122 HIADVSTGNLGANGIVGGGLPIAVGAALTAKRLRTGKVVVCFFGDGANNEGAFHEALNMA 181 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 +W L VI+V ENN Y M TS +R++A N + R ++++PG+ VDG + V +A Sbjct: 182 TIWKLPVIFVCENNGYGMSTSTARSTAVANVADRAAAYSMPGVIVDGNVLSDVAEASHEA 241 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 V R GP +IE TYRYRGHS SD YRTR+EI++ +N DPI++ +L+ A Sbjct: 242 VERARRGDGPTLIECKTYRYRGHSKSDRNRYRTRDEIDDWMTNRDPIKRYEAQLIEFGIA 301 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +L+ + +V++ I +EFA++ P Sbjct: 302 TSDELEAVRGSVQQEIEAGIEFAKASPMP 330 >gi|187779709|ref|ZP_02996182.1| hypothetical protein CLOSPO_03305 [Clostridium sporogenes ATCC 15579] gi|187773334|gb|EDU37136.1| hypothetical protein CLOSPO_03305 [Clostridium sporogenes ATCC 15579] Length = 340 Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 130/323 (40%), Positives = 191/323 (59%), Gaps = 1/323 (0%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG V + N+ + Y+ ML IR+FE+ A + G + GF HL IG+EAV G+ +L Sbjct: 10 EGKIVKKLNENSIVEMYKTMLKIRKFEQVAMNTFAEGKIPGFVHLYIGEEAVATGVCANL 69 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 + D + + +R HGHILA G D +MAEL G+ G KGKGGSMH+ G G +GI Sbjct: 70 KDSDYITSTHRGHGHILAKGGDLKFMMAELFGKATGYCKGKGGSMHIADATKGILGANGI 129 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGA ++ G + +YR +D++CV FGD + NQG +ES N+A++W L V++V ENN Sbjct: 130 VGAGHNIAVGAGLSAQYRGTDQVCVCFFGDASTNQGTFHESLNMASVWKLPVVFVCENNL 189 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 Y + S +R A + + RGV++N+PG+ VDG D+ AV +A+ R KGP +IE Sbjct: 190 YGISMSQNRHQAIKDVADRGVAYNVPGIVVDGNDVFAVYEAAKEAIKRAREGKGPTLIEC 249 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR+RGH DP Y+ EE E + DPI + K L+ N+ +E LKE++ V Sbjct: 250 KTYRHRGHFEGDPCVYKPTEEQEEWLAK-DPIPRFEKYLVENEILTEEKLKEVQNKVESQ 308 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 I+ +V+FA + P+ + D+ Sbjct: 309 IDEAVDFANNSPYPELESVLEDV 331 >gi|229018088|ref|ZP_04174963.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH1273] gi|228743179|gb|EEL93304.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH1273] Length = 341 Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 19 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 79 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLNKGMLGANGIVGGGF 138 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 139 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 198 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 199 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRN 258 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+ Sbjct: 259 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEREVDDAVQKSI 318 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 319 EFSENSPYPEDEELLKDVYV 338 >gi|229030456|ref|ZP_04186496.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH1271] gi|228730895|gb|EEL81835.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH1271] Length = 332 Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 186/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKVTGLCKGKGGSMHIADLNKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQKSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 310 EFSENSPYPEDEELLKDVYV 329 >gi|148300624|gb|ABQ58815.1| PDHA1 [Homo sapiens] Length = 261 Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 137/236 (58%), Positives = 181/236 (76%), Gaps = 5/236 (2%) Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 +I+AELTGR+GG +KGKGGSMHM++ KN FYGG+GIVGAQV LG GIA A KY D++C Sbjct: 4 EILAELTGRKGGCAKGKGGSMHMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVC 61 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG F Sbjct: 62 LTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF- 119 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEIN 302 IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI Sbjct: 120 IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQ 179 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 180 EVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEEL 235 >gi|163940524|ref|YP_001645408.1| pyruvate dehydrogenase (acetyl-transferring) [Bacillus weihenstephanensis KBAB4] gi|163862721|gb|ABY43780.1| Pyruvate dehydrogenase (acetyl-transferring) [Bacillus weihenstephanensis KBAB4] Length = 332 Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 128/320 (40%), Positives = 186/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP +IE +TYR Sbjct: 190 TFEYASSCNSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTLIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 250 YGHFEGEAQTYKTAEEKEEHLNEKDAIVHFRKHLIHEALLTESELVDMEKAVDEAVQKSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 310 EFSENSPYPEDEELLKDVYV 329 >gi|229173426|ref|ZP_04300970.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus MM3] gi|228610120|gb|EEK67398.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus MM3] Length = 341 Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 186/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 19 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 79 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 138 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 139 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 198 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 199 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRN 258 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 259 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSI 318 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 319 EFSENSPYPEDEELLKDVYV 338 >gi|229012033|ref|ZP_04169212.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus mycoides DSM 2048] gi|229167400|ref|ZP_04295138.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH621] gi|228615962|gb|EEK73049.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH621] gi|228749121|gb|EEL98967.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus mycoides DSM 2048] Length = 341 Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 128/320 (40%), Positives = 186/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 19 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 79 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 138 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 139 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 198 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP +IE +TYR Sbjct: 199 TFEYASSCNSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTLIECMTYRN 258 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 259 YGHFEGEAQTYKTAEEKEEHLNEKDAIVHFRKHLIHEALLTESELVDMEKAVDEAVQKSI 318 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 319 EFSENSPYPEDEELLKDVYV 338 >gi|78185086|ref|YP_377521.1| pyruvate dehydrogenase (lipoamide) [Synechococcus sp. CC9902] gi|78169380|gb|ABB26477.1| Pyruvate dehydrogenase (lipoamide) [Synechococcus sp. CC9902] Length = 381 Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 122/319 (38%), Positives = 195/319 (61%), Gaps = 9/319 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMI 106 +++ L YR M L RRFE+K ++Y G + GF HL GQEAV G+ ++ + D Sbjct: 56 DRDTGLDLYRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIGAMKRQHDWFC 115 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG + + + Sbjct: 116 STYRDHVHALSAGVPAREVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGFAFIAEGIPV 175 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G AF ++Y+R S+ + FGDG N GQ +E N+A LW L +++V+ENN+ Sbjct: 176 ALGSAFTSRYKRDALGDASSNSVTAAFFGDGTCNNGQFFECLNMAQLWKLPILFVVENNK 235 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA++ ++ SF + G +VDGMD+ AV+A +A+ RA +GP ++E Sbjct: 236 WAIGMAHDRATSDPEIWRKAGSFGMAGEEVDGMDVLAVRAAAQRAIERARAGEGPTVLEC 295 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R+ +E + + DP++ + + L + +L+ IE + + Sbjct: 296 LTYRFRGHSLADPDELRSEQE-KQFWAKRDPLKALERDLTEAGLVTSDELRGIEKEIDAV 354 Query: 340 INNSVEFAQSDKEPDPAEL 358 I++ V+FA S EPDPAEL Sbjct: 355 ISDCVDFALSAPEPDPAEL 373 >gi|254479041|ref|ZP_05092397.1| pyruvate dehydrogenase E1 component, alpha subunit [Carboxydibrachium pacificum DSM 12653] gi|214035037|gb|EEB75755.1| pyruvate dehydrogenase E1 component, alpha subunit [Carboxydibrachium pacificum DSM 12653] Length = 328 Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 130/322 (40%), Positives = 191/322 (59%), Gaps = 5/322 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E ++E L Y M+ IR+FEE+ +L+ G V GF HL IG+EAV VG+ +L E D + Sbjct: 2 EISREVLLDMYTRMVKIRKFEERVAELFAQGKVLGFVHLYIGEEAVAVGVCENLKEEDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH++A G D +MAEL G++ G KGKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHLIAKGGDLKYMMAELFGKETGYCKGKGGSMHIADATKGILGANGIVGGGFP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A + K R +D++ V FGDGA+NQ +E+ NIA++W L V++V ENN Y + Sbjct: 122 IAAGAALSAKMRGTDQVAVCFFGDGASNQATFHEALNIASIWKLPVVFVCENNLYGISMR 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R A + + R V + IPG+ VDG D+ AV +A+ R GP ++E TYRYR Sbjct: 182 QDRHQAIKDIADRAVGYGIPGVTVDGNDVLAVYEVAKEAINRARNGAGPTLVECKTYRYR 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR +EE+ E + DPI ++ + +L N ASE +LK+IE + + + +V+ Sbjct: 242 GHFEGDPTVYRPKEEVEEWLAK-DPILRLTRYILDNDIASEKELKDIEAKIIEEVEEAVK 300 Query: 346 FAQSDKEPDP----AELYSDIL 363 FA+ P ++Y+DI+ Sbjct: 301 FAEESPYPKEEAAVEDVYTDIV 322 >gi|284046657|ref|YP_003396997.1| pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] gi|283950878|gb|ADB53622.1| Pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] Length = 378 Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 125/303 (41%), Positives = 183/303 (60%), Gaps = 4/303 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L Y M+LIR FEE+ + Y +GG+CHL GQE VG +T+ D + ++YR H Sbjct: 38 LDLYEQMVLIRVFEEEVERQYKRARIGGYCHLASGQEGATVGAVHPMTDDDVLFSSYRTH 97 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G LA GVD +M EL GR+GG + G+GGSMH+ F GG GIV Q+ L G A Sbjct: 98 GLALAKGVDPDAVMGELFGREGGSAHGRGGSMHLLDYSKRFLGGWGIVAGQLPLAVGAAL 157 Query: 173 ANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 Y+ + V+C GD A N G +ES N+AA+W+L ++++ NN+Y MGT+V +AS Sbjct: 158 EISYK-DRRAAVMCELGDAATNMGAWHESLNLAAIWDLPAVFLVFNNRYGMGTTVEKASG 216 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + + KR +F + G +VDG D+ AV + D+ + R + P ++E++TYRYRGHS++D Sbjct: 217 EPDLYKRASAFRMHGERVDGQDVEAVLSASDRLLTRAREERKPAVLEVVTYRYRGHSVAD 276 Query: 292 PAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 YRT+EE++E + DPI+ R+RLL + E L+ IE V K + +VE A++ Sbjct: 277 AGTAYRTQEEMDEWK-KRDPIQIYRQRLLDERRVGEAQLEAIEARVDKRVEQAVEAAEAS 335 Query: 351 KEP 353 EP Sbjct: 336 PEP 338 >gi|51247009|ref|YP_066892.1| pyruvate dehydrogenase, E1 component, alpha subunit [Desulfotalea psychrophila LSv54] gi|50878046|emb|CAG37902.1| probable pyruvate dehydrogenase, E1 component, alpha subunit [Desulfotalea psychrophila LSv54] Length = 335 Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 128/291 (43%), Positives = 187/291 (64%), Gaps = 1/291 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ IRRFEEKA +LY + GF HL IG+EAV G+ +L D + YREHG+ LA Sbjct: 26 MVRIRRFEEKAAELYTKMKIRGFLHLYIGEEAVAAGVSAALEPEDATVATYREHGNALAR 85 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ A IMAE+ G+Q G S+G+GGSMH+F K FYGG+ IVG + L G+A A+K + Sbjct: 86 GISAGAIMAEMYGKQEGCSRGRGGSMHIFDDKTRFYGGNAIVGGGLPLAVGLALADKMQG 145 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ FGDGA ++G+ +ES N+AALWNL V+++ ENN YAMGT++ R+ + T+ +++ Sbjct: 146 KKRVTCCFFGDGAVSEGEFHESMNLAALWNLPVLFICENNLYAMGTALERSQSVTDLTRK 205 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 VS+ I VDGMD+ AV+A ++AV R+ + P +E TYR+R HSM DP YR++ Sbjct: 206 AVSYRIAASAVDGMDVLAVEAAANEAVNAVRSGQKPYFLECRTYRFRAHSMFDPELYRSK 265 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 E+ + + PI KRL +GD++E+E V + I +V FA++ Sbjct: 266 AEVEKWKKRC-PISSFVKRLKKQDLLDDGDVEELERQVAREIEEAVAFAEN 315 >gi|196032304|ref|ZP_03099718.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus W] gi|218903896|ref|YP_002451730.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus AH820] gi|229122322|ref|ZP_04251536.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus 95/8201] gi|195995055|gb|EDX59009.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus W] gi|218536721|gb|ACK89119.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus AH820] gi|228661171|gb|EEL16797.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus 95/8201] Length = 332 Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P EL D+ + Sbjct: 310 EFSENSPYPGDEELLKDVYV 329 >gi|300707887|ref|XP_002996136.1| hypothetical protein NCER_100821 [Nosema ceranae BRL01] gi|239605408|gb|EEQ82465.1| hypothetical protein NCER_100821 [Nosema ceranae BRL01] Length = 329 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 141/322 (43%), Positives = 196/322 (60%), Gaps = 15/322 (4%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + NKE YR ML++R EE A Y G + GFCHL IGQE + + ++ L + D+ Sbjct: 16 TTLNKELVQDVYRNMLILRLIEEYANSKYKKGNIRGFCHLVIGQENIYMSLQKVLDKNDK 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +I +YR HG CG+ I+ EL G+ G KGKGGSMH+++ + FYGGHGIVGAQV Sbjct: 76 VIGSYRCHGLAFICGISIESIIGELLGKAIGNCKGKGGSMHLYNDQ--FYGGHGIVGAQV 133 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 SLGTG+ FA +Y++ + V FGDGAANQGQV+ESFN+AALW L V+YV ENN Y+M T Sbjct: 134 SLGTGLGFALQYKKVKNVAFVFFGDGAANQGQVWESFNMAALWKLPVVYVCENNHYSMWT 193 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLT 281 S ++ + KRG +NIPG+++ +I + + R H KGPII+++ T Sbjct: 194 PESNSTTYPEYFKRG--YNIPGIRLTDKNI----TQLIDVFTFARQHAIEKGPIILQIDT 247 Query: 282 YRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YR GHS D + YR+ EEINE + N+D +++ + L K+A+ ++K IE V Sbjct: 248 YRTCGHSCLDVNDFYRSTEEINE-KKNNDCLKEAKNNL--QKFATCEEVKIIEDEVISCF 304 Query: 341 NNSVEFAQSDKEPDPAELYSDI 362 V+ KEPD EL D+ Sbjct: 305 EEGVKKVIFSKEPDIDELLKDV 326 >gi|228934052|ref|ZP_04096893.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228946385|ref|ZP_04108707.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813311|gb|EEM59610.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228825566|gb|EEM71358.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 341 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 19 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 79 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 138 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 139 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 198 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 199 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRN 258 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 259 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSI 318 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P EL D+ + Sbjct: 319 EFSENSPYPGDEELLKDVYV 338 >gi|71650759|ref|XP_814071.1| pyruvate dehydrogenase E1 component alpha subunit [Trypanosoma cruzi strain CL Brener] gi|4204872|gb|AAD11551.1| pyruvate dehydrogenase E1 alpha subunit [Trypanosoma cruzi] gi|70879012|gb|EAN92220.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Trypanosoma cruzi] Length = 378 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 144/354 (40%), Positives = 214/354 (60%), Gaps = 11/354 (3%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 + +NP K D +P + ++ EQ +M IRR E Q Y Sbjct: 15 IPINPQKPFKLHTAGRDDVPPVP-----TTATYDTEQMKKCLEMMFRIRRMESLCDQSYK 69 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 + + GFCHL IGQEA+ VGM+ LT D ++TAYR+H + G ++ AE+ G++G Sbjct: 70 LKKIRGFCHLYIGQEAIPVGMENVLTLEDLIVTAYRDHAWYIVRGGTPGEVFAEMFGKEG 129 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA 191 G SKGKGGSMHM+S KN F+GG+GIVGAQV +G G+ + DK + V +GDGA Sbjct: 130 GCSKGKGGSMHMYSVKNNFFGGNGIVGAQVPIGAGLGWRFALENRDKPRNVAVTFYGDGA 189 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 ANQGQV+E+ NIAA+ + VI+ ENNQ+ MGTS RA+ Q +RG IPG+QVDG Sbjct: 190 ANQGQVFEAMNIAAIHRIPVIFCCENNQFGMGTSKERAAYQPEMYRRGDY--IPGLQVDG 247 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDP 310 MD+ AV+ A +C + KGPI++E +YRY GHSMSDP + YR + +I ++R D Sbjct: 248 MDVLAVQEGTRWAKEWCLSGKGPIVLEFDSYRYVGHSMSDPDSQYRKKSDIQDVRKTRDC 307 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 I +++ +L ++ ++K++E +V+K ++ ++ A+ K +EL++DI + Sbjct: 308 IHKMKDFMLEEGIMTDEEMKKLEKDVKKEVDQQLQPAEKQKPTPRSELFTDIYV 361 >gi|228927825|ref|ZP_04090873.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228831888|gb|EEM77477.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 341 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 19 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 79 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 138 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 139 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 198 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 199 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRN 258 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 259 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKVVDEAVQRSI 318 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P EL D+ + Sbjct: 319 EFSENSPYPGDEELLKDVYV 338 >gi|194014756|ref|ZP_03053373.1| pyruvate dehydrogenase E1 component subunit alpha [Bacillus pumilus ATCC 7061] gi|194013782|gb|EDW23347.1| pyruvate dehydrogenase E1 component subunit alpha [Bacillus pumilus ATCC 7061] Length = 327 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 124/307 (40%), Positives = 186/307 (60%), Gaps = 1/307 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L+R F+EK Q + G++ G HLC+GQEA VG L + D++++ +R HGH Sbjct: 20 YKQMWLVRYFDEKVDQFFAKGLIHGTTHLCVGQEASAVGSIAVLKDEDKIVSTHRGHGHC 79 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G + +K+MAEL GR+ G KGKGGSMH+ + G G +GIVG + L TG A +K Sbjct: 80 IAKGAEVNKMMAELFGRETGYCKGKGGSMHIADLEKGNLGANGIVGGGIPLATGAALTSK 139 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 ++ + + FGDGA N+G +E+ N+A++W+L V+++ ENNQY M V + Sbjct: 140 MKQEGYVVLCFFGDGATNEGSFHEALNLASIWDLPVVFICENNQYGMSGPVKEMINIEDI 199 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 S R S+ IPG +DG D+ + ++D+AV+ RA +GP +IEM TYR++GHS SD Y Sbjct: 200 STRAESYGIPGKSIDGNDMVEIMNSVDEAVSRARAGEGPSLIEMKTYRWKGHSKSDAKKY 259 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREE E R D I++ + L+ +E ++ ++ I SVEFA++ KEP Sbjct: 260 RTREEETEWRQK-DGIKRFKSLLIELNVLTEEQAAALQEEAKQEIEASVEFAKNSKEPSI 318 Query: 356 AELYSDI 362 L D+ Sbjct: 319 DTLLEDV 325 >gi|157691953|ref|YP_001486415.1| pyruvate dehydrogenase (acetyl-transferring) E1 component alpha subunit [Bacillus pumilus SAFR-032] gi|157680711|gb|ABV61855.1| pyruvate dehydrogenase (acetyl-transferring) E1 component alpha subunit [Bacillus pumilus SAFR-032] Length = 327 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 125/307 (40%), Positives = 186/307 (60%), Gaps = 1/307 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L+R F+EK Q + G++ G HLC+GQEA VG L + D++++ +R HGH Sbjct: 20 YKQMWLVRYFDEKVDQFFAKGLIHGTTHLCVGQEASAVGSIAVLKDEDKIVSTHRGHGHC 79 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G + +K+MAEL GR+ G KGKGGSMH+ + G G +GIVG + L TG A +K Sbjct: 80 IAKGAEVNKMMAELFGRETGYCKGKGGSMHIADLEKGNLGANGIVGGGIPLATGAALTSK 139 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 ++ + + FGDGA N+G +E+ N+A++W+L V+++ ENNQY M V + Sbjct: 140 MKQEGFVVLCFFGDGATNEGSFHEALNLASIWDLPVVFICENNQYGMSGPVKEMINIEDI 199 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 S R S+ IPG +DG D+ + T+D+AV+ RA +GP +IEM TYR++GHS SD Y Sbjct: 200 STRAESYGIPGKSIDGNDMVDIMNTVDEAVSRARAGEGPSLIEMKTYRWKGHSKSDAKKY 259 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREE E R D I++ + L+ +E ++ ++ I SVEFA++ KEP Sbjct: 260 RTREEETEWRQK-DGIKRFKSLLIELNVLTEEQAAVLQEEAKQEIEASVEFAKNSKEPSI 318 Query: 356 AELYSDI 362 L D+ Sbjct: 319 DTLLEDV 325 >gi|228985868|ref|ZP_04146017.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229156352|ref|ZP_04284448.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus ATCC 4342] gi|228627227|gb|EEK83958.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus ATCC 4342] gi|228773903|gb|EEM22320.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 341 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 19 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 79 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 138 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 139 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 198 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 199 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRN 258 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 259 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSI 318 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P EL D+ + Sbjct: 319 EFSENSPYPGDEELLKDVYV 338 >gi|52142736|ref|YP_084094.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Bacillus cereus E33L] gi|51976205|gb|AAU17755.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Bacillus cereus E33L] Length = 332 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 128/317 (40%), Positives = 183/317 (57%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + + Sbjct: 13 TKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSITS 72 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 73 THRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFPLA 132 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 133 CGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATTFE 192 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR GH Sbjct: 193 YASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNYGH 252 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + Y+T EE E + D I RK L+H +E +L ++E V + S+EF+ Sbjct: 253 FEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDDAVQKSIEFS 312 Query: 348 QSDKEPDPAELYSDILI 364 ++ P+ EL D+ + Sbjct: 313 ENSPYPEDEELLKDVYV 329 >gi|33240811|ref|NP_875753.1| pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238340|gb|AAQ00406.1| Pyruvate dehydrogenase E1 component alpha subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 364 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 122/324 (37%), Positives = 197/324 (60%), Gaps = 9/324 (2%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E ++ N+E L +R M L RRFE+K ++Y G + GF HL GQEAV G+ ++ + Sbjct: 33 EPAQVNRETGLKIFRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSSGVICAMQQK 92 Query: 103 -DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG+ +G Sbjct: 93 HDWFCSTYRDHVHALSAGVPAREVMSELFGKESGCSKGRGGSMHLFSKEHHLLGGYAFIG 152 Query: 162 AQVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 + + G AF ++Y++ S+ + FGDG N GQ YE N+A LW L +++V Sbjct: 153 EGIPVALGSAFTSRYKKEVFNEKGSNSVTAAFFGDGTCNNGQFYECLNMAQLWKLPILFV 212 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 +ENN++A+G + RA++ ++ +F + G +VDGMD+ AV+ +A+ RA +GP Sbjct: 213 VENNKWAIGMAHDRATSDPEIWRKANAFGMKGEEVDGMDVLAVRGAAQRAIERARAGEGP 272 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 ++E LTYR+RGHS++DP R+ EE + ++ DP++ + K L S +L+ IE Sbjct: 273 TLLECLTYRFRGHSLADPDELRSAEE-KDFWASRDPLKLLEKNLTEKDLVSSKELRAIEK 331 Query: 335 NVRKIINNSVEFAQSDKEPDPAEL 358 + + + ++VEFA +P P EL Sbjct: 332 EIDQEVADAVEFAIGSADPKPEEL 355 >gi|168180286|ref|ZP_02614950.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum NCTC 2916] gi|182668764|gb|EDT80742.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum NCTC 2916] Length = 327 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 127/319 (39%), Positives = 189/319 (59%), Gaps = 1/319 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + N+ + Y+ ML IR+FE+ A + G + GF HL IG+EAV G+ +L + D Sbjct: 1 MKKLNENSIVEMYKTMLKIRKFEQVAMNTFAEGKIPGFVHLYIGEEAVATGVCANLKDSD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGHILA G D +MAEL G+ G KGKGGSMH+ G G +GIVGA Sbjct: 61 YITSTHRGHGHILAKGGDLKFMMAELFGKATGYCKGKGGSMHIADATKGILGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 ++ G + +YR +D++CV FGD + NQG +ES N+A++W L V++V ENN Y + Sbjct: 121 HNIAVGAGLSAQYRETDQVCVCFFGDASTNQGTFHESLNMASVWKLPVVFVCENNLYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S +R A + + RGV++N+PG+ VDG D+ AV +A+ R KGP +IE TYR Sbjct: 181 MSQNRHQAIKDVADRGVAYNVPGIVVDGNDVFAVYEAAKEAIKRAREGKGPTLIECKTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGH DP Y+ EE E + DPI + K L+ N+ +E LKE++ V I+ + Sbjct: 241 HRGHFEGDPCVYKPTEEQEEWLAK-DPIPRFEKYLVENEILTEEKLKEVQNKVESQIDEA 299 Query: 344 VEFAQSDKEPDPAELYSDI 362 V+FA + P+ + D+ Sbjct: 300 VDFANNSPYPELESVLEDV 318 >gi|206973622|ref|ZP_03234540.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus H3081.97] gi|217960215|ref|YP_002338775.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus AH187] gi|222096277|ref|YP_002530334.1| tpp-dependent acetoin dehydrogenase e1 alpha-subunit [Bacillus cereus Q1] gi|206747778|gb|EDZ59167.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus H3081.97] gi|217064447|gb|ACJ78697.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus AH187] gi|221240335|gb|ACM13045.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus Q1] gi|324326743|gb|ADY22003.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus thuringiensis serovar finitimus YBT-020] Length = 332 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 128/317 (40%), Positives = 184/317 (58%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + + Sbjct: 13 TKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSITS 72 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 73 THRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFPLA 132 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 133 CGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATTFE 192 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR GH Sbjct: 193 YASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRNYGH 252 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + Y+T EE E + D I RK L+H +E +L ++E V + + S+EF+ Sbjct: 253 FEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQKSIEFS 312 Query: 348 QSDKEPDPAELYSDILI 364 ++ P+ EL D+ + Sbjct: 313 ENSPYPEDEELLKDVYV 329 >gi|330833465|ref|YP_004402290.1| putative pyruvate dehydrogenase E1 component subunit alpha [Streptococcus suis ST3] gi|329307688|gb|AEB82104.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus suis ST3] Length = 322 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 126/318 (39%), Positives = 191/318 (60%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KEQ L + M IR + K +L G V G H +G+EA VG LT+ D + + Sbjct: 5 TKEQHLDMFLKMQQIRDVDMKLNKLVRRGFVQGMTHFSVGEEAAAVGPIAGLTDEDIIFS 64 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH++A G+D + +MAEL G+ G SKG+GGSMH+ + + G +G +GIVG +L Sbjct: 65 HHRGHGHVIAKGIDINGMMAELAGKATGTSKGRGGSMHLANVEKGNFGSNGIVGGGYALA 124 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A +Y +D I + GD A N+G +ES N+AA+WNL VI+ I NN+Y + T +S Sbjct: 125 VGAALTQQYLGTDNIVIAFSGDSATNEGSFHESMNLAAVWNLPVIFFITNNRYGISTDIS 184 Query: 228 RASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ++ + +R ++ IPG V DG D+ AV M + + Y RA GP ++E+ +YR+ G Sbjct: 185 YSTKIPHLYQRAAAYGIPGHYVEDGNDVIAVYEKMQEVIEYVRAGNGPAMVEVESYRWFG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS +D YRT+EE+NE ++ DP+++ RK L NK A++ +L IE V + + SV+F Sbjct: 245 HSTADAGVYRTKEEVNEWKAK-DPLKKYRKYLTENKIATDEELDAIEAQVAEQVEASVKF 303 Query: 347 AQSDKEPDPAELYSDILI 364 AQ +PD + Y D+ + Sbjct: 304 AQESPDPDISVAYEDVFV 321 >gi|47569039|ref|ZP_00239729.1| acetoin dehydrogenase, alpha subunit [Bacillus cereus G9241] gi|301054296|ref|YP_003792507.1| acetoin dehydrogenase (TPP-dependent) E1 component subunit alpha [Bacillus anthracis CI] gi|47554308|gb|EAL12669.1| acetoin dehydrogenase, alpha subunit [Bacillus cereus G9241] gi|300376465|gb|ADK05369.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Bacillus cereus biovar anthracis str. CI] Length = 332 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 128/320 (40%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E ++ ++E V + + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESEIVDMEKAVDEAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P EL D+ + Sbjct: 310 EFSENSPYPGDEELLKDVYV 329 >gi|302390554|ref|YP_003826375.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermosediminibacter oceani DSM 16646] gi|302201182|gb|ADL08752.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermosediminibacter oceani DSM 16646] Length = 328 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 126/317 (39%), Positives = 186/317 (58%), Gaps = 1/317 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + KE L Y M IR+FEEK +L+ G + GF HL IG+EA VG+ +LT+ D + Sbjct: 2 DLTKELLLDMYTKMNKIRKFEEKVSELFARGKILGFVHLYIGEEATAVGVCENLTDKDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH++A G D +MAEL G+ G KGKGGSMH+ + G G +GIVG + Sbjct: 62 TSTHRGHGHLIAKGGDLKFMMAELFGKATGYCKGKGGSMHIADVQKGILGANGIVGGGLP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G + K RR+D++ V FGDGA+N+G +E+ N+A++W L V++V ENN Y + Sbjct: 122 IAVGAGLSAKLRRTDQVAVCFFGDGASNEGTFHEALNMASIWKLPVVFVCENNLYGISMR 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R A + + R +++ PG+ VDG D+ AV +AV R GP +IE TYR+R Sbjct: 182 QDRHQAIADIADRAIAYGFPGVTVDGNDVLAVYEAAREAVKRAREGAGPTLIECKTYRWR 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR +EE+ E + DPI ++ + +L N +E +LKEIE N+ + + +V Sbjct: 242 GHFEGDPTVYRPKEEVEEWVA-RDPIPRLARYILDNNIVTEEELKEIECNIIRELEEAVR 300 Query: 346 FAQSDKEPDPAELYSDI 362 FA+ P+ DI Sbjct: 301 FAEESPYPEETSAVEDI 317 >gi|149200385|ref|ZP_01877402.1| dehydrogenase complex, E1 component, alpha subunit [Lentisphaera araneosa HTCC2155] gi|149136508|gb|EDM24944.1| dehydrogenase complex, E1 component, alpha subunit [Lentisphaera araneosa HTCC2155] Length = 320 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 124/314 (39%), Positives = 185/314 (58%), Gaps = 1/314 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE+ L M+ +RRFEE + Y + GFCH IGQEAV VG LT D +T+ Sbjct: 6 KEKALQMLEQMIRVRRFEEGCLKSYQQKFITGFCHTYIGQEAVAVGAMAHLTPTDAYVTS 65 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR H L G+ + ++MAE+ G+ G +GKGGSMH+FS KN + GGHGIVG Q+ +G Sbjct: 66 YRCHAQGLIGGLTSREVMAEMFGKITGCVRGKGGSMHVFSKKNNYLGGHGIVGGQIPIGL 125 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G AFA KY + + + FGDGA+ QG +ES N+A+LW++ VI++ ENNQY MGTS R Sbjct: 126 GAAFALKYEEKEGVALTFFGDGASMQGTFHESLNLASLWDVPVIFICENNQYGMGTSNDR 185 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 A A S ++ + G +VDGM++ A + +A C+ + P ++ + TYRY+GHS Sbjct: 186 ALANPQVSDFAAAYKMKGYEVDGMNLEASYKAFGEIIADCKKNSRPALVNVTTYRYQGHS 245 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +SD YRT++E+ + DPI K + W E K ++ ++ + ++++FA+ Sbjct: 246 VSDAGLYRTKDEVKCWKEK-DPINSFYKSMEEQGWIDEEGYKALDKEMKAEVKDALDFAK 304 Query: 349 SDKEPDPAELYSDI 362 P EL + + Sbjct: 305 ESPWPPMDELTNHV 318 >gi|229091778|ref|ZP_04222977.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-42] gi|228691560|gb|EEL45314.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-42] Length = 341 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 128/320 (40%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 19 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 79 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 138 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 139 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 198 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 199 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRN 258 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE + D I RK L+H +E +L ++E V + S+ Sbjct: 259 YGHFEGEAQTYKTSEEKEAHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDDAVQKSI 318 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 319 EFSENSPYPEDEELLKDVYV 338 >gi|224824120|ref|ZP_03697228.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Lutiella nitroferrum 2002] gi|224603539|gb|EEG09714.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Lutiella nitroferrum 2002] Length = 348 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 129/316 (40%), Positives = 178/316 (56%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F E L R ML IRR EEKA +LYG G + GF HL IG+EAV G +L D ++ Sbjct: 25 FAPELALGLLRDMLRIRRLEEKAAELYGAGQIRGFLHLYIGEEAVAAGAMRALAPEDTVV 84 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YREHG L GV IMAE+ G+Q G S+G+GGSMH+F K F+GG+ IV + L Sbjct: 85 ATYREHGQALLRGVSMRAIMAEMFGKQEGCSRGRGGSMHLFDAKARFFGGNAIVAGGLPL 144 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A A++ + ++ FGDGA +G +ES N+AALW L V++ ENN YAMGT++ Sbjct: 145 AVGLALADRMQGIRRVTACFFGDGAVAEGAFHESMNLAALWQLPVLFCCENNLYAMGTAL 204 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA AQT+ ++ S+ I VDGMD+ A +A RA + P +E TYR+R Sbjct: 205 PRAQAQTDLCRKAASYGIAARAVDGMDVVATYPAALEAADTVRAAQQPFFLEFQTYRFRA 264 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSM DP YR + EI + H PI RL +E ++ V + ++++V F Sbjct: 265 HSMFDPDLYRDKAEIEHWK-EHGPIHTYTARLKTQGRLAEEQFLALDAEVGREVDDAVAF 323 Query: 347 AQSDKEPDPAELYSDI 362 A + A+L D+ Sbjct: 324 ADAGHWEPVADLLRDV 339 >gi|229196948|ref|ZP_04323688.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus m1293] gi|228586505|gb|EEK44583.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus m1293] Length = 341 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 128/316 (40%), Positives = 184/316 (58%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + + Sbjct: 23 KEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSITST 82 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 83 HRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFPLAC 142 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 143 GSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATTFEY 202 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR GH Sbjct: 203 ASSCDSIADRARAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRNYGHF 262 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 + Y+T EE E + D I RK L+H +E +L ++E V + + S+EF++ Sbjct: 263 EGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQKSIEFSE 322 Query: 349 SDKEPDPAELYSDILI 364 + P+ EL D+ + Sbjct: 323 NSPYPEDEELLKDVYV 338 >gi|116072339|ref|ZP_01469606.1| Pyruvate dehydrogenase (lipoamide) [Synechococcus sp. BL107] gi|116064861|gb|EAU70620.1| Pyruvate dehydrogenase (lipoamide) [Synechococcus sp. BL107] Length = 366 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 122/319 (38%), Positives = 194/319 (60%), Gaps = 9/319 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMI 106 +++ L YR M L RRFE+K ++Y G + GF HL GQEAV G+ ++ + D Sbjct: 41 DRDTGLDLYRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIGAMKRQHDWFC 100 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG + + + Sbjct: 101 STYRDHVHALSAGVPAREVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGFAFIAEGIPV 160 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G AF ++Y+R S+ + FGDG N GQ +E N+A LW L +++V+ENN+ Sbjct: 161 ALGSAFTSRYKRDALGDASSNSVTAAFFGDGTCNNGQFFECLNMAQLWKLPILFVVENNK 220 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA++ ++ SF + G +VDGMD+ AV+A +A+ RA +GP ++E Sbjct: 221 WAIGMAHDRATSDPEIWRKAGSFGMAGEEVDGMDVLAVRAAAQRAIERARAGEGPTVLEC 280 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R+ +E + DP++ + + L + +L+ IE + + Sbjct: 281 LTYRFRGHSLADPDELRSEQE-KLFWAKRDPLKALERDLTEAGLVTSDELRGIEKEIDAV 339 Query: 340 INNSVEFAQSDKEPDPAEL 358 I++ V+FA S EPDPAEL Sbjct: 340 ISDCVDFALSAPEPDPAEL 358 >gi|312073597|ref|XP_003139592.1| pyruvate dehydrogenase E1 component alpha subunit [Loa loa] gi|307765248|gb|EFO24482.1| pyruvate dehydrogenase E1 component alpha subunit [Loa loa] Length = 325 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 131/299 (43%), Positives = 186/299 (62%), Gaps = 6/299 (2%) Query: 66 EEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKI 125 E+ + LY + GFCHL GQEA VG+ + D +IT+YR HG + ++ Sbjct: 2 EQASELLYKERKIRGFCHLYAGQEACAVGLYAAKDPDDAIITSYRCHGFVYLVRNSIKEV 61 Query: 126 MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVV 185 ++EL GR G GKGGSMHM+ KN FYGG+GIVGAQ +G GIAF KY+R +C Sbjct: 62 LSELLGRSHGNVNGKGGSMHMYG-KN-FYGGNGIVGAQQPIGAGIAFTMKYKRKPNLCFT 119 Query: 186 CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIP 245 +GDGAANQGQ+ E+ N+ ALW L +++ ENN Y +GT +SR+SA T++ RG IP Sbjct: 120 LYGDGAANQGQLSEAANLCALWRLPCVFICENNGYGLGTPISRSSASTDYYARGDY--IP 177 Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDP-ANYRTREEINE 303 G+ VD MD+ AV+ ++ A YC P+ IE TYR+ GHSMSDP +YR+REE+ Sbjct: 178 GIWVDAMDVLAVRESIKFARKYCTTDGNRPLFIEFATYRFYGHSMSDPGTSYRSREEVQN 237 Query: 304 MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +R DPI ++ ++L + A++ ++K IE V+ +N +V+FA+ D L +DI Sbjct: 238 VRKTCDPISLLKNKILASNLATKDEVKLIEKQVKDEVNEAVKFARDDPVISMDALITDI 296 >gi|33862620|ref|NP_894180.1| pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. MIT 9313] gi|33634536|emb|CAE20522.1| Pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. MIT 9313] Length = 363 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 122/314 (38%), Positives = 190/314 (60%), Gaps = 9/314 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYRE 111 L +R M L RRFE+K ++Y G + GF HL GQEAV G+ ++ + D + YR+ Sbjct: 43 LELFRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIGAMKRQHDWFCSTYRD 102 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG +G + + G A Sbjct: 103 HVHALSAGVPAREVMSELFGKETGCSKGRGGSMHLFSQEHHLLGGFAFIGEGIPIALGAA 162 Query: 172 FANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 F ++Y+R S+ + FGDG N GQ +E N+A LW L +++V+ENN++A+G Sbjct: 163 FTSRYKRDALGDASSNAVTAAFFGDGTCNNGQFFECLNMAQLWQLPILFVVENNKWAIGM 222 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + RA+++ ++ +F + G +VDGMD+ AV+A +A+ RA +GP ++E LTYR+ Sbjct: 223 AHERATSEPEIWQKAAAFGMAGEEVDGMDVLAVRAATQRAIKRARAGEGPTLLECLTYRF 282 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHS++DP R EE + + DP++ + K L +L+ IE + IN+ V Sbjct: 283 RGHSLADPDELRAEEE-KQFWAKRDPLKALEKDLTSESLVRAEELRAIEKEIDAEINDCV 341 Query: 345 EFAQSDKEPDPAEL 358 EFA + EP+P EL Sbjct: 342 EFALAAAEPNPNEL 355 >gi|42781861|ref|NP_979108.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus ATCC 10987] gi|42737785|gb|AAS41716.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus ATCC 10987] Length = 332 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 128/317 (40%), Positives = 184/317 (58%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + + Sbjct: 13 TKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDRDSITS 72 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 73 THRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFPLA 132 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 133 CGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATTFE 192 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR GH Sbjct: 193 YASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRNYGH 252 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + Y+T EE E + D I RK L+H +E +L ++E V + + S+EF+ Sbjct: 253 FEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQKSIEFS 312 Query: 348 QSDKEPDPAELYSDILI 364 ++ P+ EL D+ + Sbjct: 313 ENSPYPEDEELLKDVYV 329 >gi|226314743|ref|YP_002774639.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Brevibacillus brevis NBRC 100599] gi|226097693|dbj|BAH46135.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Brevibacillus brevis NBRC 100599] Length = 332 Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 125/318 (39%), Positives = 184/318 (57%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++E+ Y+ ML IR+FE+K L+G G + GF HL G+EA+ VG+ L + D + Sbjct: 13 LSREKAAWMYQKMLEIRKFEDKVHDLFGQGKIPGFVHLYAGEEAIAVGLCAHLDDSDTIT 72 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D + +MAE+ GR G+ KGKGGSMH+ G G +GIVG L Sbjct: 73 STHRGHGHCIAKGCDLNGMMAEIYGRATGLCKGKGGSMHIADLDKGMLGANGIVGGGYPL 132 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+++ + V FGDGA NQG +E N+AA+W L ++V ENN Y T Sbjct: 133 ACGAALTAKYKQTGAVSVCFFGDGANNQGTFHEGINLAAIWKLPAVFVAENNGYGEATPF 192 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S AS+ + R +++NIPG++VDG D+ AV +A+ R +GP +IE +TYR G Sbjct: 193 SYASSCKTIADRAIAYNIPGIRVDGKDVLAVYQAAQEAIERARRGEGPTLIECVTYRNYG 252 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D Y+ EE S D I + + LL K +E +L EIE V K + +V F Sbjct: 253 HFEGDAQKYKKDEEKKAHLSEIDAIRKFQNDLLSGKLFTENELGEIEAAVDKAVEEAVAF 312 Query: 347 AQSDKEPDPAELYSDILI 364 +++ P+P+EL +D+ + Sbjct: 313 SENSPYPEPSELLTDVYV 330 >gi|229097293|ref|ZP_04228255.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-29] gi|229116289|ref|ZP_04245679.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock1-3] gi|228667121|gb|EEL22573.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock1-3] gi|228686104|gb|EEL40020.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-29] Length = 341 Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 127/320 (39%), Positives = 186/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 19 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 79 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 138 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 139 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 198 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP +IE +TYR Sbjct: 199 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTLIECMTYRN 258 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 259 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDEAVQRSI 318 Query: 345 EFAQSDKEPDPAELYSDILI 364 +F+++ P+ EL D+ + Sbjct: 319 DFSENSPYPEDEELLKDVYV 338 >gi|148379591|ref|YP_001254132.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A str. ATCC 3502] gi|153933670|ref|YP_001383969.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A str. ATCC 19397] gi|153936990|ref|YP_001387513.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A str. Hall] gi|153938705|ref|YP_001390967.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum F str. Langeland] gi|170761461|ref|YP_001787034.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A3 str. Loch Maree] gi|148289075|emb|CAL83165.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium botulinum A str. ATCC 3502] gi|152929714|gb|ABS35214.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A str. ATCC 19397] gi|152932904|gb|ABS38403.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A str. Hall] gi|152934601|gb|ABS40099.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum F str. Langeland] gi|169408450|gb|ACA56861.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A3 str. Loch Maree] gi|295319026|gb|ADF99403.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum F str. 230613] gi|322805947|emb|CBZ03512.1| acetoin dehydrogenase E1 component alpha-subunit [Clostridium botulinum H04402 065] Length = 327 Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 127/319 (39%), Positives = 189/319 (59%), Gaps = 1/319 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + N+ + Y+ ML IR+FE+ A + G + GF HL IG+EAV G+ +L + D Sbjct: 1 MKKLNENSIVEMYKTMLKIRKFEQVAMNTFAEGKIPGFVHLYIGEEAVATGVCANLKDSD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGHILA G D +MAEL G+ G KGKGGSMH+ G G +GIVGA Sbjct: 61 YITSTHRGHGHILAKGGDLKFMMAELFGKATGYCKGKGGSMHIADATKGILGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 ++ G + +YR +D++CV FGD + NQG +ES N+A++W L V++V ENN Y + Sbjct: 121 HNIAVGAGLSAQYRGTDQVCVCFFGDASTNQGTFHESLNMASVWKLPVVFVCENNLYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S +R A + + RGV++N+PG+ VDG D+ AV +A+ R KGP +IE TYR Sbjct: 181 MSQNRHQAIKDVADRGVAYNVPGIVVDGNDVFAVYEAAKEAIKRAREGKGPTLIECKTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGH DP Y+ EE E + DPI + K L+ N+ +E LKE++ V I+ + Sbjct: 241 HRGHFEGDPCVYKPTEEQEEWLAK-DPIPRFEKYLVENEILTEEKLKEVQNKVESQIDEA 299 Query: 344 VEFAQSDKEPDPAELYSDI 362 V+FA + P+ + D+ Sbjct: 300 VDFANNSPYPELESVLEDV 318 >gi|116317926|emb|CAH65949.1| H0716A07.7 [Oryza sativa Indica Group] Length = 425 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 125/328 (38%), Positives = 189/328 (57%), Gaps = 10/328 (3%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S +E+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L + D Sbjct: 71 SAVTREEALELYEDMVLGRIFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLNQADC 130 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +++ YR+H H L+ GV A +MAEL G+ G +G+GGSMHMFS + GG +G + Sbjct: 131 VVSTYRDHVHALSKGVPARSVMAELFGKATGCCRGQGGSMHMFSEPHNLLGGFAFIGEGI 190 Query: 165 SLGTGIAFANKYR-------RSD--KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + TG AFA KYR R D + + FGDG N GQ +E N+A LW L +++V+ Sbjct: 191 PVATGAAFAAKYRHEVLKQSRPDGLDVTLAFFGDGTCNNGQFFECLNMAQLWKLPIVFVV 250 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENN +A+G S RA++ K+G +F +PG+ VDGMD+ V+ +A+ R +GP Sbjct: 251 ENNLWAIGMSHLRATSDPEIYKKGPAFGMPGVHVDGMDVLKVREVAKEAIERARRGEGPT 310 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 ++E TYR+RGHS++DP R +E + + DPI ++K ++ A+E +LK IE Sbjct: 311 LVECETYRFRGHSLADPDELRRPDEKSHY-AARDPITALKKYIIEQNLATESELKSIEKK 369 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDIL 363 + ++ +VEFA + P ++L ++ Sbjct: 370 IDDVVEEAVEFADASPLPPRSQLLENVF 397 >gi|229139411|ref|ZP_04267982.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BDRD-ST26] gi|228643958|gb|EEL00219.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BDRD-ST26] Length = 341 Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 128/316 (40%), Positives = 183/316 (57%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + + Sbjct: 23 KEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSITST 82 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 83 HRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFPLAC 142 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 143 GSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATTFEY 202 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR GH Sbjct: 203 ASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRNYGHF 262 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 + Y+T EE E + D I RK L+H +E +L ++E V + + S+EF++ Sbjct: 263 EGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQKSIEFSE 322 Query: 349 SDKEPDPAELYSDILI 364 + P EL D+ + Sbjct: 323 NSPYPKDEELLKDVYV 338 >gi|327194492|gb|EGE61352.1| acetoin dehydrogenase TPP-dependent subunit alpha [Rhizobium etli CNPAF512] Length = 343 Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 130/336 (38%), Positives = 194/336 (57%), Gaps = 4/336 (1%) Query: 27 ATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI 86 A S + ++PF+ ++ ++Q L A R M LIRRFEE A + Y G++ G HL I Sbjct: 7 AMKSAETSNLPFI----YRQYTRDQLLDALRKMHLIRRFEEGAEESYTRGLIHGTMHLSI 62 Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 GQEA +G+ + LT+ DQ+ + +R HGH +A G D ++ AE G+ G G+GGSMH+ Sbjct: 63 GQEASAMGVCLPLTQEDQITSTHRGHGHCIAKGADVKRMFAEFFGKTTGYCAGRGGSMHI 122 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 G G +GIVG + + G A +K ++ K+ V FGDGA N+G +E+ N+AA+ Sbjct: 123 ADVTTGNLGANGIVGGGLPIAVGAALTSKRLKTGKVVVCFFGDGANNEGAFHEALNMAAV 182 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 W L VI+V ENN Y M TS +R++A N + R ++++PG+ VDG + V AV Sbjct: 183 WKLPVIFVCENNGYGMSTSTARSTAVANIADRAAAYSMPGVIVDGNVLSEVAEATHNAVE 242 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASE 326 + +GP +IE TYRYRGHS SD YRT++EI + SN DPI + L A++ Sbjct: 243 RAKRGEGPSLIECKTYRYRGHSKSDRNRYRTKDEIEDWMSNRDPIARFETELREFGVAND 302 Query: 327 GDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +L I +V I +EFA+ P+ + L ++ Sbjct: 303 TELAAIRKSVEDEIAAGIEFAKQSPMPEISGLADNV 338 >gi|311067294|ref|YP_003972217.1| acetoin dehydrogenase E1 component TPP-dependent subunit alpha [Bacillus atrophaeus 1942] gi|310867811|gb|ADP31286.1| acetoin dehydrogenase E1 component TPP-dependent alpha subunit [Bacillus atrophaeus 1942] Length = 329 Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 133/325 (40%), Positives = 189/325 (58%), Gaps = 4/325 (1%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG ++E E+ L Y+ ML IR FE+K +L+ G++ GF HL G+EAV G+ L Sbjct: 7 EGLSLTE---EKALWMYQKMLEIRGFEDKVHELFAEGVLPGFVHLYAGEEAVAAGVCAHL 63 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +GD + + +R HGH +A G D + +MAE+ G+ G+ KGKGGSMH+ G G +GI Sbjct: 64 DDGDSITSTHRGHGHCIAKGCDLNGMMAEIFGKSAGLCKGKGGSMHIADLDKGMLGANGI 123 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VG +L G A KY+ ++ + V FGDGA NQG +E N+AA+WNL VI+V ENN Sbjct: 124 VGGGFTLACGSALTAKYKNTNNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVIFVAENNG 183 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 Y T S ASA + + R ++N+PG+ VDG DI AV ++AV R +GP +IE Sbjct: 184 YGEATPFSYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAVRRARNGEGPSLIEC 243 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +TYR GH D Y+T+EE E D I+ + LL + E L EIE +V Sbjct: 244 ITYRNYGHFEGDAQTYKTKEEKAEHLEKRDAIKGFKNYLLQEQ-TDENKLSEIEKHVAHS 302 Query: 340 INNSVEFAQSDKEPDPAELYSDILI 364 I +VEF++ P +EL +D+ + Sbjct: 303 IKKAVEFSEESAYPGESELLTDVYV 327 >gi|196041679|ref|ZP_03108970.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus NVH0597-99] gi|196027448|gb|EDX66064.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus NVH0597-99] Length = 332 Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 128/317 (40%), Positives = 183/317 (57%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + + Sbjct: 13 TKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSITS 72 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 73 THRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFPLA 132 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 133 CGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATTFE 192 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR GH Sbjct: 193 YASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNYGH 252 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + Y+T EE E + D I RK L+H +E +L ++E V + + S+EF+ Sbjct: 253 FEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKVVDEAVQRSIEFS 312 Query: 348 QSDKEPDPAELYSDILI 364 ++ P EL D+ + Sbjct: 313 ENSPYPGDEELLKDVYV 329 >gi|257125329|ref|YP_003163443.1| pyruvate dehydrogenase (acetyl-transferring) [Leptotrichia buccalis C-1013-b] gi|257049268|gb|ACV38452.1| Pyruvate dehydrogenase (acetyl-transferring) [Leptotrichia buccalis C-1013-b] Length = 321 Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 129/319 (40%), Positives = 193/319 (60%), Gaps = 2/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +K + L+ Y ML IR F+ K QL GMV G HL +G+EA VG +L D + Sbjct: 2 ELSKGKLLNIYERMLSIRNFDLKVNQLVKRGMVPGMTHLSVGEEAANVGAIAALNADDLI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG ++A G+D + +MAE+ G+ G KGKGGSMH+ ++G G +GIVG Sbjct: 62 TSNHRGHGQVIAKGIDLNGMMAEIMGKATGTCKGKGGSMHIADLESGNLGANGIVGGGHG 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A+ K + + KI V FGDGA N+G +E+ N+A++WN+ VI+ NN Y + TS Sbjct: 122 MAVGAAYTQKVKNTGKIVVCFFGDGATNEGSFHEAMNLASVWNVPVIFYSINNGYGISTS 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +++ + + KR V++ +PG + DG D+ +V T +KAV + R KGP+ IE +TYR+ Sbjct: 182 INKVTNVEHLYKRAVAYGMPGYFIEDGNDVLSVYETFEKAVEHVREGKGPVFIESITYRW 241 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS SDP YRT+EE++ + DP + R LL N A+E +L E+E +K I ++V Sbjct: 242 FGHSSSDPGKYRTKEEVDGWKLK-DPNLKFRNYLLENNIATEEELVELEQKSKKQIEDAV 300 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFA++ EP + DI Sbjct: 301 EFAKNSPEPTLESAFEDIF 319 >gi|229103381|ref|ZP_04234063.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-28] gi|228679877|gb|EEL34072.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-28] Length = 341 Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 127/320 (39%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 19 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 79 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 138 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 139 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 198 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV +AV R GP +IE +TYR Sbjct: 199 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAKEAVERARNGGGPTLIECMTYRN 258 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 259 YGHFEGEAQTYKTSEEKEEHLNEKDTIVNFRKHLIHEGLLTESELVDMEKAVDEAVQRSI 318 Query: 345 EFAQSDKEPDPAELYSDILI 364 +F+++ P+ EL D+ + Sbjct: 319 DFSENSPYPEDEELLKDVYV 338 >gi|168060164|ref|XP_001782068.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666479|gb|EDQ53132.1| predicted protein [Physcomitrella patens subsp. patens] Length = 441 Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 126/323 (39%), Positives = 190/323 (58%), Gaps = 8/323 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +++ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L +GD + + Sbjct: 92 TRDEGLELYEDMVLGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKGDYVTS 151 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A ++MAEL G+ G +G+GGSMHMFS ++G GG +G + + Sbjct: 152 TYRDHVHALSKGVPARQVMAELFGKTTGCCRGQGGSMHMFSAEHGLLGGFAFIGEGIPVA 211 Query: 168 TGIAFANKYRRSD-------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 G AF++KY+R + + FGDG AN GQ +E N+A LW L VI+V+ENN + Sbjct: 212 VGAAFSSKYKREVLKEEGDMPVSIAFFGDGTANNGQFFECLNMAQLWKLPVIFVVENNLW 271 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+G S R+++ K+G +F + VDGMD+ V+ +AV R GP +IE Sbjct: 272 AIGMSHFRSTSDPEIWKKGPAFGMASAHVDGMDVLKVREVAREAVERARRGDGPTLIECE 331 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYR+RGHS++DP R E + DPI ++K LL N+ A+E +LK IE + +++ Sbjct: 332 TYRFRGHSLADPDELREPAE-KAHYAARDPIVALKKYLLENEIATEAELKTIEKKIDEVV 390 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 ++VEFA + P+ ++L ++ Sbjct: 391 EDAVEFADASPLPERSQLLENVF 413 >gi|326502500|dbj|BAJ95313.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326504470|dbj|BAJ91067.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 419 Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 123/325 (37%), Positives = 187/325 (57%), Gaps = 10/325 (3%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +E+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L + D +++ Sbjct: 68 TREEALELYEDMILGRNFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKQLNQPDCVVS 127 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A ++MAEL G+ G +G+GGSMHMFS + GG +G + + Sbjct: 128 TYRDHVHALSKGVPAREVMAELFGKATGCCRGQGGSMHMFSEPHNLLGGFAFIGEGIPVA 187 Query: 168 TGIAFANKYRRSD---------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 TG AFA KYR + + FGDG N GQ +E N+A LW L +I+V+ENN Sbjct: 188 TGAAFAAKYRHEVLKQSSPGGLDVTLAFFGDGTCNNGQFFECLNMAQLWKLPIIFVVENN 247 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +A+G S R+++ K+G +F +PG+ VDGMD+ V+ +A+ R +GP ++E Sbjct: 248 LWAIGMSHLRSTSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIDRARRGEGPTLVE 307 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYR+RGHS++DP R +E + + DPI ++K ++ ASE +LK IE + Sbjct: 308 CETYRFRGHSLADPDELRRPDEKSHY-AARDPITSLKKYIIEQNLASEAELKSIEKKIDD 366 Query: 339 IINNSVEFAQSDKEPDPAELYSDIL 363 ++ +VEFA + P ++L ++ Sbjct: 367 VVEEAVEFADASPLPPRSQLLENVF 391 >gi|302039128|ref|YP_003799450.1| pyruvate dehydrogenase E1 component subunit alpha [Candidatus Nitrospira defluvii] gi|300607192|emb|CBK43525.1| Pyruvate dehydrogenase E1 component, alpha subunit [Candidatus Nitrospira defluvii] Length = 324 Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 126/316 (39%), Positives = 184/316 (58%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F +EQ L R ML IRRFEE+ +LY +G + GF HL IG+EAV G S T D ++ Sbjct: 5 FTREQGLELLRHMLRIRRFEERTAELYQLGKIHGFLHLYIGEEAVAAGSIPSFTNEDAIV 64 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YREHGH L G ++MAEL G+ G ++G+GGSMH F FYGG IV + + Sbjct: 65 ATYREHGHALVRGTSMKQLMAELYGKAAGCARGRGGSMHFFDASRRFYGGLAIVAGGLPV 124 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A A+K + ++ FGDGA +G+ +ES N+AALW L V+++ ENN YAMGT++ Sbjct: 125 AVGLALADKMQGRTRVTGCYFGDGAVAEGEFHESLNLAALWKLPVLFLCENNLYAMGTAL 184 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +R +Q + + + ++N+P VDGMD+ AV+ +A+ R GP ++E TYR+R Sbjct: 185 ARHQSQPDIAAKARAYNLPAETVDGMDVCAVQTATHQAIGSVRRGDGPYLLEYRTYRFRA 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSM D YR +EE+ E + DPI + L ++ DL+ IE + I +V F Sbjct: 245 HSMYDAELYRAKEEVTEWK-RRDPISTFAQALRTAGMLADSDLQRIEAEIATEIEEAVTF 303 Query: 347 AQSDKEPDPAELYSDI 362 A++ +L D+ Sbjct: 304 AETSPWEPVEDLTKDV 319 >gi|167037205|ref|YP_001664783.1| pyruvate dehydrogenase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256751306|ref|ZP_05492186.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter ethanolicus CCSD1] gi|307266666|ref|ZP_07548195.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter wiegelii Rt8.B1] gi|320115624|ref|YP_004185783.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856039|gb|ABY94447.1| Pyruvate dehydrogenase (acetyl-transferring) [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749861|gb|EEU62885.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter ethanolicus CCSD1] gi|306918329|gb|EFN48574.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter wiegelii Rt8.B1] gi|319928715|gb|ADV79400.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 328 Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 126/322 (39%), Positives = 191/322 (59%), Gaps = 5/322 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +++ L Y M+ IR+FEEK +L+ G V GF HL IG+EA VG+ +L + D + Sbjct: 2 EISRDVLLDMYTRMVKIRKFEEKVAELFAQGKVLGFVHLYIGEEATAVGVCENLEDKDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH++A G D +MAEL G++ G KGKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHLIAKGGDLKYMMAELYGKETGYCKGKGGSMHIADATKGILGANGIVGGGFP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A + K R +D++ V FGDGA+NQ +E+ NIA++W L V++V ENN Y + Sbjct: 122 IAAGAALSAKMRGTDQVAVCFFGDGASNQSTFHEALNIASIWKLPVVFVCENNLYGISMR 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + A + + R + + IPG+ VDG D+ AV +A+ R+ GP ++E TYRYR Sbjct: 182 QDKHQAIKDVADRAIGYGIPGVTVDGNDVLAVYEVAKEAINRARSGAGPTLVECKTYRYR 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR++EE+ E + DPI ++ K +L N A+E +LK+IE + + + +V Sbjct: 242 GHFEGDPTIYRSKEEVEEWLAK-DPILRLSKHILDNDVATEKELKDIEARIVEEVEEAVR 300 Query: 346 FAQSDKEPDP----AELYSDIL 363 FA+ P ++Y+DI+ Sbjct: 301 FAEESPYPKEEAAVEDVYTDIV 322 >gi|108798063|ref|YP_638260.1| pyruvate dehydrogenase (lipoamide) [Mycobacterium sp. MCS] gi|119867159|ref|YP_937111.1| pyruvate dehydrogenase (acetyl-transferring) [Mycobacterium sp. KMS] gi|126433724|ref|YP_001069415.1| pyruvate dehydrogenase (acetyl-transferring) [Mycobacterium sp. JLS] gi|108768482|gb|ABG07204.1| Pyruvate dehydrogenase (lipoamide) [Mycobacterium sp. MCS] gi|119693248|gb|ABL90321.1| Pyruvate dehydrogenase (acetyl-transferring) [Mycobacterium sp. KMS] gi|126233524|gb|ABN96924.1| Pyruvate dehydrogenase (acetyl-transferring) [Mycobacterium sp. JLS] Length = 325 Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 125/305 (40%), Positives = 176/305 (57%), Gaps = 1/305 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ +RR EE+ +LYG G + GF HL +G+EAV G +L D ++ YREH H L Sbjct: 14 MVRVRRMEEECAKLYGDGKIRGFLHLYVGEEAVAAGSLRALRPDDAVVGTYREHAHALLR 73 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GV + IMAE+ G+Q G S G+GGSMH+F FYGG+ IVG + L TG+A A+ +R Sbjct: 74 GVPMTSIMAEMFGKQEGCSGGRGGSMHLFDAGTRFYGGNAIVGGGLPLATGLALADAQQR 133 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 +I FGDGA +G +ES N+AALW L V++ ENN YAMGT++ RA +QT+ + + Sbjct: 134 RRRITACFFGDGAVAEGVFHESLNMAALWRLPVLFCCENNLYAMGTALERAQSQTDLAAK 193 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 S+ +P VDGMD+ A +A + R GP IE TYR+R HSM DP YR + Sbjct: 194 AASYKVPTATVDGMDVLACHTATVQAADHIRDTGGPFFIEFRTYRFRAHSMFDPELYRDK 253 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 E++ R+ DPI R + ++EIE + +V FA++ D +L Sbjct: 254 AEVDVWRTR-DPITTFTDRCANEGVLDAQCVREIEQAAENEVQEAVSFAEAGTWEDIGDL 312 Query: 359 YSDIL 363 D+L Sbjct: 313 ERDVL 317 >gi|108805128|ref|YP_645065.1| pyruvate dehydrogenase [Rubrobacter xylanophilus DSM 9941] gi|108766371|gb|ABG05253.1| Pyruvate dehydrogenase (lipoamide) [Rubrobacter xylanophilus DSM 9941] Length = 353 Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 128/312 (41%), Positives = 189/312 (60%), Gaps = 6/312 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M+LIR FE+ + + G +GG+ H+ GQEAV G + EGD++IT YR+H H Sbjct: 32 YGKMVLIRAFEDACQRAFRQGKIGGYLHVYTGQEAVATGFLEAFREGDRVITGYRDHAHA 91 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G D ++MAEL G++ G+ KGKGGSMH+F + GF GG+GIVG + LG GIA+A + Sbjct: 92 LLLGCDPKEVMAELFGKRTGLVKGKGGSMHLFDVERGFMGGYGIVGGHIPLGVGIAYALR 151 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN----VIYVIENNQYAMGTSVSRASA 231 Y S+ IC + GDGA N G +E+ N+A LW + +++ENNQY MGTSV RA+A Sbjct: 152 YGGSEGICQLYLGDGAINNGAFHEAANLAGLWGKDGMCPCFFIVENNQYGMGTSVERATA 211 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 T+ + + S+ I +VDGMD+ AV ++ R P +E +TYR H +D Sbjct: 212 MTDLAAKFNSYAIGNEKVDGMDLEAVIECGERVAERVRETGRPYAVEAITYRIAPHGAAD 271 Query: 292 -PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 YRT+EE+ + R+ DPI + K+LL E ++EI+ R+ ++ +V++A Sbjct: 272 FFEKYRTKEEVEKWRA-RDPIGILEKKLLERDALDEERIEEIKDEARQRVSEAVKYADES 330 Query: 351 KEPDPAELYSDI 362 +EP ELY+D+ Sbjct: 331 EEPPIEELYTDV 342 >gi|326390548|ref|ZP_08212104.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter ethanolicus JW 200] gi|325993373|gb|EGD51809.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter ethanolicus JW 200] Length = 328 Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 126/322 (39%), Positives = 191/322 (59%), Gaps = 5/322 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +++ L Y M+ IR+FEEK +L+ G V GF HL IG+EA VG+ +L + D + Sbjct: 2 EISRDVLLDMYTRMVKIRKFEEKVAELFAQGKVLGFVHLYIGEEATAVGVCENLEDKDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH++A G D +MAEL G++ G KGKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHLIAKGGDLKYMMAELYGKETGYCKGKGGSMHIADATKGILGANGIVGGGFP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A + K R +D++ V FGDGA+NQ +E+ NIA++W L V++V ENN Y + Sbjct: 122 IAAGAALSAKMRGTDQVTVCFFGDGASNQSTFHEALNIASIWKLPVVFVCENNLYGISMR 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + A + + R + + IPG+ VDG D+ AV +A+ R+ GP ++E TYRYR Sbjct: 182 QDKHQAIKDVADRAIGYGIPGVTVDGNDVLAVYEVAKEAINRARSGAGPTLVECKTYRYR 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR++EE+ E + DPI ++ K +L N A+E +LK+IE + + + +V Sbjct: 242 GHFEGDPTIYRSKEEVEEWLAK-DPILRLSKHILDNDVATEKELKDIEARIVEEVEEAVR 300 Query: 346 FAQSDKEPDP----AELYSDIL 363 FA+ P ++Y+DI+ Sbjct: 301 FAEESPYPKEEAAVEDVYTDIV 322 >gi|332798638|ref|YP_004460137.1| Pyruvate dehydrogenase [Tepidanaerobacter sp. Re1] gi|332696373|gb|AEE90830.1| Pyruvate dehydrogenase (acetyl-transferring) [Tepidanaerobacter sp. Re1] Length = 319 Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 127/316 (40%), Positives = 190/316 (60%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +K+++L YR M IR FE + +L+ ++ G CHL +G+EA VG +L + D + Sbjct: 3 LSKDKKLWMYRKMCEIRNFELEVDRLFKANLIWGTCHLSVGEEASAVGAVAALEKDDMIT 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G ++ AEL G++ G +G+GGSMH+ + G G +GIVG + + Sbjct: 63 STHRGHGHCIAKGGKLPQMFAELLGKETGYCRGRGGSMHIADLEMGNLGANGIVGGGIPI 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 TG A A+K + + K+ + FGDGA NQG +E+ N+ A+ L ++Y+ ENN Y M Sbjct: 123 ATGAALASKLKNNGKVTLCFFGDGATNQGVFHEAVNLGAVKKLPIVYLCENNLYGMSVPF 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +ASA N + R ++NIPG VDG D+ AV + +AV R +GP IIE TYR+ G Sbjct: 183 EKASAAKNVADRAAAYNIPGAAVDGNDVEAVYEIVKEAVEKAREGEGPSIIEAKTYRWLG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS SDP YRTREE E PI++ R++L+ A+E +L EIE +V KII ++E+ Sbjct: 243 HSKSDPRVYRTREE-EEAWKQKCPIKRYRQKLISEGTATEEELDEIEKSVEKIIQEALEY 301 Query: 347 AQSDKEPDPAELYSDI 362 AQ+ EP E+ + Sbjct: 302 AQNSPEPKVEEIMDGV 317 >gi|49477854|ref|YP_036865.1| acetoin dehydrogenase (TPP-dependent) E1 component subunit alpha [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49329410|gb|AAT60056.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 332 Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 127/317 (40%), Positives = 183/317 (57%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + + Sbjct: 13 TKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSITS 72 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 73 THRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFPLA 132 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 133 CGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATTFE 192 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR GH Sbjct: 193 YASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNYGH 252 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + Y+T EE E + D I RK L+H +E ++ ++E V + + S+EF+ Sbjct: 253 FEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESEIVDMEKAVDEAVQRSIEFS 312 Query: 348 QSDKEPDPAELYSDILI 364 ++ P EL D+ + Sbjct: 313 ENSPYPGDEELLKDVYV 329 >gi|87125500|ref|ZP_01081345.1| Pyruvate dehydrogenase (lipoamide) [Synechococcus sp. RS9917] gi|86166800|gb|EAQ68062.1| Pyruvate dehydrogenase (lipoamide) [Synechococcus sp. RS9917] Length = 363 Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 121/322 (37%), Positives = 195/322 (60%), Gaps = 9/322 (2%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGD 103 +E +++ L+ YR M L RRFE+K ++Y G + GF HL GQEAV G+ ++ + D Sbjct: 35 AEVDRDTGLALYRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIGAMKRQHD 94 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YR+H H L+ GV A ++M+EL G+ G SKG+GGSMH+FS ++ GG +G Sbjct: 95 WFCSTYRDHVHALSAGVPAREVMSELFGKATGCSKGRGGSMHLFSRQHHLLGGFAFIGEG 154 Query: 164 VSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + + G AF ++Y+R S+ + FGDG N GQ +E N+A LW L +++V+E Sbjct: 155 IPVALGSAFTSRYKRDALGDASSNAVTAAFFGDGTCNNGQFFECLNMAQLWKLPILFVVE 214 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN++A+G + RA++ ++ +F + G +VDGMD+ AV+A +A+ RA +GP + Sbjct: 215 NNKWAIGMAHDRATSDPEIWRKAAAFGMAGEEVDGMDVLAVRAATQRALERARAGEGPTL 274 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +E LTYR+RGHS++DP R E + + DP++ + + L+ + DL+ IE ++ Sbjct: 275 LECLTYRFRGHSLADPDELRAEAE-KQFWAQRDPLKALERDLVTAGLVTSDDLRAIEKDI 333 Query: 337 RKIINNSVEFAQSDKEPDPAEL 358 + + V+FA + EPD AEL Sbjct: 334 DAEVQDCVDFALAAPEPDGAEL 355 >gi|167040656|ref|YP_001663641.1| pyruvate dehydrogenase [Thermoanaerobacter sp. X514] gi|300914697|ref|ZP_07132013.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter sp. X561] gi|307724069|ref|YP_003903820.1| pyruvate dehydrogenase E1 component subunit alpha [Thermoanaerobacter sp. X513] gi|166854896|gb|ABY93305.1| Pyruvate dehydrogenase (acetyl-transferring) [Thermoanaerobacter sp. X514] gi|300889632|gb|EFK84778.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter sp. X561] gi|307581130|gb|ADN54529.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter sp. X513] Length = 328 Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 126/322 (39%), Positives = 191/322 (59%), Gaps = 5/322 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +++ L Y M+ IR+FEEK +L+ G V GF HL IG+EA VG+ +L + D + Sbjct: 2 EISRDILLDMYTRMVKIRKFEEKVAELFAQGKVLGFVHLYIGEEATAVGVCENLEDKDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH++A G D +MAEL G++ G KGKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHLIAKGGDLKYMMAELYGKETGYCKGKGGSMHIADATKGILGANGIVGGGFP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A + K R +D++ V FGDGA+NQ +E+ NIA++W L V++V ENN Y + Sbjct: 122 IAAGAALSAKMRGTDQVAVCFFGDGASNQSTFHEALNIASIWKLPVVFVCENNLYGISMR 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + A + + R + + IPG+ VDG D+ AV +A+ R+ GP ++E TYRYR Sbjct: 182 QDKHQAIKDVADRAIGYGIPGVTVDGNDVLAVYEVAKEAINRARSGAGPTLVECKTYRYR 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR++EE+ E + DPI ++ K +L N A+E +LK+IE + + + +V Sbjct: 242 GHFEGDPTIYRSKEEVEEWLAK-DPILRLSKHILDNDVATEKELKDIEARIVEEVEEAVR 300 Query: 346 FAQSDKEPDP----AELYSDIL 363 FA+ P ++Y+DI+ Sbjct: 301 FAEESPYPKEEAAVEDVYTDIV 322 >gi|87301097|ref|ZP_01083938.1| Pyruvate dehydrogenase E1 alpha subunit [Synechococcus sp. WH 5701] gi|87284065|gb|EAQ76018.1| Pyruvate dehydrogenase E1 alpha subunit [Synechococcus sp. WH 5701] Length = 365 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 129/319 (40%), Positives = 194/319 (60%), Gaps = 9/319 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG-MKMSLTEGDQMI 106 +E+ L+ YR M L RRFE+K ++Y G + GF HL GQEAV G +K + D Sbjct: 40 TREEGLTLYRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIKAMRAQHDWFC 99 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++M+EL G+ G SKG+GGSMH+FS ++ GG+ +G + + Sbjct: 100 STYRDHVHALSAGVPAREVMSELFGKATGCSKGRGGSMHLFSKEHHLLGGYAFIGEGIPV 159 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G AF ++Y+R SD + FGDG N GQ +E N+AALW L +++V+ENN+ Sbjct: 160 ALGAAFTSRYKRDALGEADSDAVTAAFFGDGTCNNGQFFECLNMAALWKLPILFVVENNK 219 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA++ ++ +F + G +VDGMD+ AV+A +AV RA +GP ++E Sbjct: 220 WAIGMAHDRATSDPEIWRKAAAFGMAGEEVDGMDVLAVRAAAQRAVERARAGEGPTLLEC 279 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R+ E E + DP++ + L + AS +LK IE + Sbjct: 280 LTYRFRGHSLADPDELRSEVE-KEFWAKRDPLKALAAHLTSHDLASLEELKAIEKEIDAE 338 Query: 340 INNSVEFAQSDKEPDPAEL 358 + ++VEFA EPDP EL Sbjct: 339 VADAVEFAVGAPEPDPGEL 357 >gi|226948957|ref|YP_002804048.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A2 str. Kyoto] gi|226842893|gb|ACO85559.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A2 str. Kyoto] Length = 327 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 126/319 (39%), Positives = 189/319 (59%), Gaps = 1/319 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + N+ + Y+ ML IR+FE+ A + G + GF HL IG+EAV G+ +L + D Sbjct: 1 MKKLNENSIVEMYKTMLKIRKFEQVAMNTFAEGKIPGFVHLYIGEEAVATGVCANLKDSD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGHILA G D +MAEL G+ G KGKGGSMH+ G G +GIVGA Sbjct: 61 YITSTHRGHGHILAKGGDLKFMMAELFGKATGYCKGKGGSMHIADATKGILGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 ++ G + +YR +D++CV FGD + NQG +ES N+A++W L V++V ENN Y + Sbjct: 121 HNIAVGAGLSAQYRGTDQVCVCFFGDASTNQGTFHESLNMASVWKLPVVFVCENNLYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S +R A + + RGV++N+PG+ VDG D+ AV +A+ R KGP +IE TYR Sbjct: 181 MSQNRHQAIKDVADRGVAYNVPGIVVDGNDVFAVYEAAKEAIKRAREGKGPTLIECKTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGH DP Y+ EE E + DPI + K L+ N+ +E LK+++ V I+ + Sbjct: 241 HRGHFEGDPCVYKPTEEQEEWLAK-DPIPRFEKYLVENEILTEEKLKKVQNKVESQIDEA 299 Query: 344 VEFAQSDKEPDPAELYSDI 362 V+FA + P+ + D+ Sbjct: 300 VDFANNSPYPELESVLEDV 318 >gi|194476610|ref|YP_002048789.1| Pyruvate dehydrogenase E1 alpha subunit [Paulinella chromatophora] gi|171191617|gb|ACB42579.1| Pyruvate dehydrogenase E1 alpha subunit [Paulinella chromatophora] Length = 362 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 126/318 (39%), Positives = 190/318 (59%), Gaps = 9/318 (2%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMIT 107 +E+ L +R MLL RRFE+K ++Y G + GF HL GQEAV G+ +L + D + + Sbjct: 38 REEALMLFRDMLLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVATGVIKALKPQYDWVCS 97 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS+K GG+ +G + + Sbjct: 98 TYRDHVHALSAGVPAREVMSELFGKETGCSKGRGGSMHLFSSKYHLLGGYAFIGEGIPVA 157 Query: 168 TGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 G AF ++Y+R SD + V FGDG N GQ YE N+A LW L +++V+ENNQ+ Sbjct: 158 LGSAFTSRYKRDALGDTSSDAVTVAFFGDGTCNVGQFYECLNMAQLWRLPIVFVVENNQW 217 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+G RA+++ ++ F + G VDGM++ +V+ KA+ R+ +GP +IE L Sbjct: 218 AIGMDHDRATSEPEIWRKAAGFGMIGEVVDGMNVLSVRIAAQKAIKRARSGQGPTLIECL 277 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYR+RGHS++DP R E + DPI+ L+ S +L IE + I Sbjct: 278 TYRFRGHSLADPDELRDEAE-KQFWIQRDPIKTFESHLITENLVSSKELGVIEKEIDAEI 336 Query: 341 NNSVEFAQSDKEPDPAEL 358 +++EFA S EP+ +EL Sbjct: 337 ADAIEFAISAPEPNASEL 354 >gi|222100932|gb|ACM43728.1| mitochondrial pyruvate dehydrogenase E1 component subunit alpha [Nosema bombycis] Length = 331 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 136/320 (42%), Positives = 200/320 (62%), Gaps = 10/320 (3%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + K E Y+ M+ IR E L+ + GFCHL IGQEA+ +K L +GD+ Sbjct: 20 TPLKKANERELYKDMITIREMELLLKNLFIEKRIRGFCHLVIGQEAIYAALKHVL-QGDK 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 ++ +YR HG A G+ +I+ EL G+ G KGKGGSMH+++ FYGGHGIVGAQV Sbjct: 79 VVGSYRCHGLAYASGISVQEIVCELLGKVNGNCKGKGGSMHLYNET--FYGGHGIVGAQV 136 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +GTG+A+A KY+ +D +C FGDGAANQGQV+ESFN+A LWNL V++V ENN Y+M T Sbjct: 137 PIGTGVAYALKYKNTDGVCYTFFGDGAANQGQVFESFNMAKLWNLPVVFVCENNFYSMWT 196 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++ T + +RG+ NIPG++++G DI + + + + + GPIII++ TYR Sbjct: 197 LQEDSTTNTRYFERGI--NIPGIRINGNDIDELILAFTYSREFAKVN-GPIIIQIDTYRT 253 Query: 285 RGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D + YR + EI EM+ N D + ++RL K S G + EIE +V+ I++ Sbjct: 254 CEHSCIDKDDFYRKKSEIEEMK-NQDGLSIFKERL--TKETSAGVVSEIEEDVQDFISSV 310 Query: 344 VEFAQSDKEPDPAELYSDIL 363 + A + ++P ++LYSDI+ Sbjct: 311 EKMALNSEDPPASDLYSDII 330 >gi|254525916|ref|ZP_05137968.1| pyruvate dehydrogenase E1 component, alpha subunit [Prochlorococcus marinus str. MIT 9202] gi|221537340|gb|EEE39793.1| pyruvate dehydrogenase E1 component, alpha subunit [Prochlorococcus marinus str. MIT 9202] Length = 357 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 124/328 (37%), Positives = 200/328 (60%), Gaps = 9/328 (2%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L+ + ++ ++E L Y M L RRFE+K ++Y G + GF HL GQEA+ G+ + Sbjct: 23 LQDIKKAKLDRETGLFLYEDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAISTGVIGA 82 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 + + D + YR+H H L+ GV + ++M+EL G+ G SKG+GGSMH+FS ++ GG+ Sbjct: 83 MKKKHDWFCSTYRDHVHALSAGVPSFEVMSELFGKATGCSKGRGGSMHLFSKEHHLLGGY 142 Query: 158 GIVGAQVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 +G + + G AF++KY++ SD + FGDG N GQ +E N+A LW L Sbjct: 143 AFIGEGIPVALGAAFSSKYKKEVAGNSTSDSVTAAFFGDGTCNNGQFFECLNMAQLWKLP 202 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +I+V+ENN++A+G + RA++ ++ +F + G +VDGMD+ AV+ +A+ RA Sbjct: 203 IIFVVENNKWAIGMAHDRATSNPEIWRKAAAFGMQGEEVDGMDVLAVRGAAQRAIERARA 262 Query: 271 HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 +GP ++E LTYRYRGHS++DP R+ +E E DPI+++ + +++ K+A+E +LK Sbjct: 263 GEGPTLLECLTYRYRGHSLADPDELRSEKE-KEFWGKRDPIKKLAQEIINGKFATEEELK 321 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDPAEL 358 IE + I+ SV+ A EP EL Sbjct: 322 IIEKRIDTEISESVKNAIEAPEPPSQEL 349 >gi|170755603|ref|YP_001781263.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum B1 str. Okra] gi|169120815|gb|ACA44651.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum B1 str. Okra] Length = 327 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 126/319 (39%), Positives = 188/319 (58%), Gaps = 1/319 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + N+ + Y+ ML IR+FE+ A + G + GF HL IG+EAV G+ +L + D Sbjct: 1 MKKLNENSIVEMYKTMLKIRKFEQVAMNTFAEGKIPGFVHLYIGEEAVATGVCANLKDSD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGHILA G D +MAEL G+ G KGKGGSMH+ G G +GIVGA Sbjct: 61 YITSTHRGHGHILAKGGDLKFMMAELFGKATGYCKGKGGSMHIADATKGILGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 ++ G + +YR +D++CV FGD + NQG +ES N+A++W L V++V ENN Y + Sbjct: 121 HNIAVGAGLSAQYRGTDQVCVCFFGDASTNQGTFHESLNMASVWKLPVVFVCENNLYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S +R A + + RGV++N+PG+ VDG D+ AV +A+ R KGP +IE TYR Sbjct: 181 MSQNRHQAIKDVADRGVAYNVPGIVVDGNDVFAVYEAAKEAIKRAREGKGPTLIECKTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGH DP Y+ EE E + DPI + + L+ N+ +E LKE++ V I + Sbjct: 241 HRGHFEGDPCVYKPTEEQEEWLAK-DPIPRFERYLVENEILTEEKLKEVQNKVESQIGEA 299 Query: 344 VEFAQSDKEPDPAELYSDI 362 V+FA + P+ + D+ Sbjct: 300 VDFANNSPYPELESVLEDV 318 >gi|260890279|ref|ZP_05901542.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Leptotrichia hofstadii F0254] gi|260859899|gb|EEX74399.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Leptotrichia hofstadii F0254] Length = 325 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 128/321 (39%), Positives = 193/321 (60%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E +K + L+ Y ML IR F+ K QL GMV G HL +G+EA VG +L D Sbjct: 4 IMELSKGKLLNIYERMLSIRDFDLKVNQLVKRGMVPGMTHLSVGEEAANVGAIAALNADD 63 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG ++A G+D + +MAE+ G+ G KGKGGSMH+ ++G G +GIVG Sbjct: 64 LITSNHRGHGQVIAKGIDLNGMMAEIMGKATGTCKGKGGSMHIADLESGNLGANGIVGGG 123 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G A+ K + + KI V FGDGA N+G +E+ N+A++WN+ VI+ NN Y + Sbjct: 124 HGMAVGAAYTQKVKNTGKIVVCFFGDGATNEGSFHEAMNLASVWNVPVIFYSINNGYGIS 183 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 TS+++ + + KR ++ +PG + DG D+ +V T +KAV + R KGP+ IE +TY Sbjct: 184 TSINKVTKVEHLYKRAAAYGMPGYFIEDGNDVLSVYETFEKAVEHVREGKGPVFIESITY 243 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRT+EE++ + DP + R LL N A+E +L E+E +K I + Sbjct: 244 RWFGHSSSDPGKYRTKEEVDGWKLK-DPNLKFRNYLLENNIATEEELVELEQKSKKQIED 302 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 +VEFA++ EP + DI Sbjct: 303 AVEFAKNSPEPTLESAFEDIF 323 >gi|123966682|ref|YP_001011763.1| pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. MIT 9515] gi|123201048|gb|ABM72656.1| Pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. MIT 9515] Length = 345 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 126/328 (38%), Positives = 197/328 (60%), Gaps = 9/328 (2%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L+ F+ ++ ++E L Y M L RRFE+K ++Y G + GF HL GQEA+ G+ + Sbjct: 11 LQDFKKAKLDRETGLFLYEDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAISTGVIGA 70 Query: 99 LT-EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 + + D + YR+H H L+ GV + ++M+EL G+ G SKG+GGSMH+FS ++ GG+ Sbjct: 71 MKRKHDWFCSTYRDHVHALSAGVPSFEVMSELFGKATGCSKGRGGSMHLFSKEHHLLGGY 130 Query: 158 GIVGAQVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 +G + + G AF++KY++ SD + FGDG N GQ +E N+A LW L Sbjct: 131 AFIGEGIPVALGSAFSSKYKKVVAGDSQSDSVTAAFFGDGTCNNGQFFECLNMAQLWKLP 190 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +I+V+ENN++A+G + RA++ ++ +F + G +VDGMD+ AV+ +AV RA Sbjct: 191 IIFVVENNKWAIGMAHDRATSDPEIWRKASAFGMHGEEVDGMDVLAVRGAAQRAVERARA 250 Query: 271 HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 +GP ++E LTYR+RGHS++DP R EE E DPI+++ K ++ +A E +LK Sbjct: 251 GEGPTLLECLTYRFRGHSLADPDELRAEEE-KEFWGKRDPIKKLAKLMIEGDFAKEEELK 309 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDPAEL 358 IE + I+ SV+ A EP EL Sbjct: 310 SIEKKIDLEISESVKNALEAPEPPANEL 337 >gi|78779768|ref|YP_397880.1| pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. MIT 9312] gi|78713267|gb|ABB50444.1| Pyruvate dehydrogenase (lipoamide) [Prochlorococcus marinus str. MIT 9312] Length = 357 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 125/328 (38%), Positives = 199/328 (60%), Gaps = 9/328 (2%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L+ + ++ ++E L Y M L RRFE+K ++Y G + GF HL GQEA+ G+ + Sbjct: 23 LQDIKKAKLDRETGLFLYEDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAISTGVIGA 82 Query: 99 L-TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 + + D + YR+H H L+ GV + ++M+EL G+ G SKG+GGSMH+FS ++ GG+ Sbjct: 83 MRKKHDWFCSTYRDHVHALSAGVPSFEVMSELFGKATGCSKGRGGSMHLFSKEHHLLGGY 142 Query: 158 GIVGAQVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 +G + + G AF++KY++ SD + FGDG N GQ +E N+A LW L Sbjct: 143 AFIGEGIPVALGAAFSSKYKKEVAGNNSSDSVTAAFFGDGTCNNGQFFECLNMAQLWKLP 202 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +I+V+ENN++A+G + RA++ ++ +F + G +VDGMD+ AV+ +A+ RA Sbjct: 203 IIFVVENNKWAIGMAHDRATSNPEIWRKASAFGMHGEEVDGMDVLAVRGAAQRAIERARA 262 Query: 271 HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 +GP ++E LTYRYRGHS++DP R+ E E S DPI+++ +++ K+A+E +LK Sbjct: 263 GEGPTLLECLTYRYRGHSLADPDELRSERE-KEFWSKRDPIKKLAHEIINGKFATEEELK 321 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDPAEL 358 IE + I+ SV+ A EP EL Sbjct: 322 IIEKKIDTEISESVKNALEAPEPPSQEL 349 >gi|298705611|emb|CBJ28862.1| Pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor (PDHE1-A) [Ectocarpus siliculosus] Length = 354 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 136/342 (39%), Positives = 197/342 (57%), Gaps = 36/342 (10%) Query: 28 TSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIG 87 T +D ++P E + N+E+ +S ++LM +RR E Y Sbjct: 12 TKDIDTHNLPVSLPTEATT-NREELMSYFKLMYTMRRMEITCDTEYK------------- 57 Query: 88 QEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMF 147 D IT+YR H LA G + AEL G + G+S+GKGGSMHM+ Sbjct: 58 ---------------DSWITSYRCHCTALARGGTVESVFAELFGFKEGVSRGKGGSMHMY 102 Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYR----RSDKICVVCFGDGAANQGQVYESFNI 203 + ++ F+GG GIVGAQV +GTG+AFA+KY + + +GDGAANQGQ++E+ N+ Sbjct: 103 NKEHSFFGGQGIVGAQVPVGTGLAFASKYSAPAGEDTPVALAMYGDGAANQGQIWEAANM 162 Query: 204 AALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 A+LW L +IY IENNQY MGTS R+S+ + + G +IPG ++DGM++ ++ Sbjct: 163 ASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGN--HIPGFKLDGMNVLMIREGFAF 220 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 A +C GPI IE+ TYRY GHSMSDP YR R+EI MR+ DPIE V+ L+ N Sbjct: 221 AKDWCSKGNGPIYIEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNG 280 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 A +LK+IE ++RK + +++ A+ +P ELYS+I + Sbjct: 281 LAEAQELKDIEKDIRKEVQEALKKAKGGTQPPDEELYSNIWV 322 >gi|255654123|ref|ZP_05399532.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile QCD-23m63] gi|296449838|ref|ZP_06891605.1| pyruvate dehydrogenase complex E1 component alpha subunit [Clostridium difficile NAP08] gi|296877902|ref|ZP_06901922.1| pyruvate dehydrogenase complex E1 component alpha subunit [Clostridium difficile NAP07] gi|296261325|gb|EFH08153.1| pyruvate dehydrogenase complex E1 component alpha subunit [Clostridium difficile NAP08] gi|296431099|gb|EFH16926.1| pyruvate dehydrogenase complex E1 component alpha subunit [Clostridium difficile NAP07] Length = 320 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 123/316 (38%), Positives = 188/316 (59%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE L Y+ M R+FEEK + GMV G HL +GQEA V M+L +GD + Sbjct: 3 ISKETLLEMYKRMNQARKFEEKVSWFFARGMVHGTTHLSVGQEASSVAAVMALEKGDLVS 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +R H + G+D +K+MAEL G++ G KGKGGSMH+ ++G G +G+VG +++ Sbjct: 63 LTHRGHSQFIGMGIDLNKMMAELMGKETGFCKGKGGSMHIADIESGNLGANGVVGGGLTI 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A +Y+++ KI + FGDGA+N+G +E N++++W L +I+ ENN Y M TS+ Sbjct: 123 APGAALTQQYKKTGKIVLCSFGDGASNEGTFHEGINLSSIWKLPIIFYCENNLYGMSTSI 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R + + R S+ I G+ +DG + V T+ KA CR +GP++IE TYR+ G Sbjct: 183 KRHMNIESIATRAASYGIEGISIDGYNPIEVYETVQKAAEKCRRGEGPVLIESRTYRWLG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS SD YRT+EEI ++ DPIE +R L+ N ++E +L +I+ ++ I ++VEF Sbjct: 243 HSKSDANVYRTKEEIESWKAK-DPIEFLRNYLIENNLSNEDELDKIQEFAKQSIEDAVEF 301 Query: 347 AQSDKEPDPAELYSDI 362 AQ+ P L D+ Sbjct: 302 AQNSPNPKIESLLEDV 317 >gi|33861844|ref|NP_893405.1| pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640212|emb|CAE19747.1| Pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 345 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 126/331 (38%), Positives = 199/331 (60%), Gaps = 9/331 (2%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 I L+ F+ ++ ++E L Y M L RRFE+K ++Y G + GF HL GQEA+ G+ Sbjct: 8 ISNLQDFKKAKLDRETGLFLYEDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAISTGV 67 Query: 96 KMSLT-EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 ++ + D + YR+H H L+ GV + ++M+EL G+ G SKG+GGSMH+FS ++ Sbjct: 68 IGAMKRKHDWFCSTYRDHVHALSAGVPSFEVMSELFGKATGCSKGRGGSMHLFSKEHHLL 127 Query: 155 GGHGIVGAQVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALW 207 GG+ +G + + G AF++KY++ SD + FGDG N GQ +E N+A LW Sbjct: 128 GGYAFIGEGIPVALGSAFSSKYKKEVVGDNQSDSVTAAFFGDGTCNNGQFFECLNMAQLW 187 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 L +I+V+ENN++A+G + RA++ ++ +F + G +VDGMD+ AV+ +AV Sbjct: 188 KLPIIFVVENNKWAIGMAHDRATSNPEIWRKASAFGMHGEEVDGMDVLAVRGAAQRAVER 247 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 RA +GP ++E LTYR+RGHS++DP R EE E + DPI+++ +++ +A E Sbjct: 248 ARAGEGPTLLECLTYRFRGHSLADPDELRAEEE-KEFWAKRDPIKKLANQIIEGNFAQEE 306 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +LK IE + I+ SV+ A EP EL Sbjct: 307 ELKSIEKKIDLEISESVKNALDAPEPPSNEL 337 >gi|319652404|ref|ZP_08006520.1| dihydrolipoyl dehydrogenase E1 alpha subunit [Bacillus sp. 2_A_57_CT2] gi|317395866|gb|EFV76588.1| dihydrolipoyl dehydrogenase E1 alpha subunit [Bacillus sp. 2_A_57_CT2] Length = 331 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 124/326 (38%), Positives = 192/326 (58%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 LE + +KE+ Y+ M+ IR+FE++ +L+ G++ GF HL G+EAV VG+ Sbjct: 4 LESSKDVALSKEKAQWMYQKMVEIRQFEDRVHELFAKGILPGFVHLYAGEEAVAVGVCAH 63 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L + D + + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +G Sbjct: 64 LNDKDSITSTHRGHGHCIAKGCDLDGMMAEIYGKVTGLCKGKGGSMHIADFDKGMLGANG 123 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG L G A KY+++D + V FGDGA N G +E N+AA+W L V++V ENN Sbjct: 124 IVGGGFPLACGSALTAKYKKTDNVSVCFFGDGAQNHGTFHEGINLAAIWKLPVVFVAENN 183 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 YA T S AS+ + R +++NIPG++VDG D+ AV ++AV R +GP +IE Sbjct: 184 GYAEATPFSYASSCKSIVDRAIAYNIPGIKVDGKDVLAVYQAAEEAVQRARRGEGPTLIE 243 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 +TYR GH D Y+ +E E + + D I R LL+ + +E +++ IE +V Sbjct: 244 CVTYRNYGHFEGDAQTYKADQEKAEHKQDKDAILLFRNHLLNEQLLAESEVEAIEESVEA 303 Query: 339 IINNSVEFAQSDKEPDPAELYSDILI 364 +N +V+F++ P+ +EL +D+ + Sbjct: 304 AVNQAVKFSEESPYPNASELLTDVYV 329 >gi|148263672|ref|YP_001230378.1| pyruvate dehydrogenase (acetyl-transferring) [Geobacter uraniireducens Rf4] gi|146397172|gb|ABQ25805.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacter uraniireducens Rf4] Length = 332 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 126/307 (41%), Positives = 181/307 (58%), Gaps = 1/307 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + ++ +++ L R MLLIRRFE K+ +LY + GF HL G+EAV VG+ +LT Sbjct: 7 QTAKVDRDHGLRLLRKMLLIRRFEAKSAELYSAMKIRGFLHLYDGEEAVAVGVMEALTPE 66 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D ++ YREHG LA GV A+ IMAE+ G+Q G S+G+GGSMH+F FYGG+ IVG Sbjct: 67 DAVVATYREHGQALARGVSANAIMAEMYGKQEGCSRGRGGSMHLFDAAARFYGGNAIVGG 126 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + L G A A+ + ++ FGDGA +G YES N+AALW L V++++ENN YAM Sbjct: 127 GLPLALGFALADAMQGKKRVTCCFFGDGATAEGVFYESLNLAALWRLPVLFILENNLYAM 186 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GT++ A A + + + S + VDGMD+ AV+ + + R GP IE TY Sbjct: 187 GTAICYAHAVADIAPKAASHGVQTEIVDGMDVLAVEKGARRGAEFVREGNGPYFIECRTY 246 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+R HSM D YRTR E+ + R DPI S+ D++E+E +V ++ Sbjct: 247 RFRAHSMFDAELYRTRAEVEKWR-KRDPIASFFDLCKEQAVLSDADMEELERDVAAEVDG 305 Query: 343 SVEFAQS 349 +V FA++ Sbjct: 306 AVAFAEA 312 >gi|288818796|ref|YP_003433144.1| pyruvate/2-oxoglutarate dehydrogenase complex E1 component alpha subunit [Hydrogenobacter thermophilus TK-6] gi|288788196|dbj|BAI69943.1| pyruvate/2-oxoglutarate dehydrogenase complex E1 component alpha subunit [Hydrogenobacter thermophilus TK-6] gi|308752382|gb|ADO45865.1| Pyruvate dehydrogenase (acetyl-transferring) [Hydrogenobacter thermophilus TK-6] Length = 323 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 131/307 (42%), Positives = 179/307 (58%), Gaps = 3/307 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M L R E +A + Y G +GGF HL IGQEAV VG +GD + YREH Sbjct: 10 YFYMKLGRELEIRAKEEYTKGNIGGFLHLDIGQEAVSVGAVFGFGKGD-LFCPYREHVLA 68 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G+D IMAEL G+ G+SKGKGGSMH++ K FYGG+ IVGA + G A+A K Sbjct: 69 LARGMDPKLIMAELFGKITGVSKGKGGSMHLYEPKLDFYGGNAIVGAHLPHAVGAAYARK 128 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y + FGDGA N G +ES N+A +W + V+++ ENN YA+GT + R SA + Sbjct: 129 YMGEKAGVLAIFGDGATNGGSFFESINLAVVWEVPVLFLCENNFYAIGTRIDRVSAFRDI 188 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + + +P +QVDGMD+ AV + A Y + P IE +TYRY GHSM+D +Y Sbjct: 189 YLKAKDY-MPALQVDGMDVFAVYEAVVNAKKYLEDYGKPYFIEAITYRYEGHSMADKGDY 247 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R+ EI R DPIE ++ + + W + ++ ++ + +II +VEFA + EPD Sbjct: 248 RSPREIETFRKK-DPIENLKNKAMQMGWLTPEQIRMMDEKIAQIIEEAVEFALNSPEPDL 306 Query: 356 AELYSDI 362 ELY DI Sbjct: 307 EELYKDI 313 >gi|242072242|ref|XP_002446057.1| hypothetical protein SORBIDRAFT_06g001120 [Sorghum bicolor] gi|241937240|gb|EES10385.1| hypothetical protein SORBIDRAFT_06g001120 [Sorghum bicolor] Length = 431 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 122/325 (37%), Positives = 184/325 (56%), Gaps = 10/325 (3%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +E+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L + D +++ Sbjct: 80 TREEALEVYEDMVLGRVFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLNQADCVVS 139 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV +MAEL G+ G +G+GGSMHMFS + GG +G + + Sbjct: 140 TYRDHVHALSKGVPPRNVMAELFGKATGCCRGQGGSMHMFSAPHNLLGGFAFIGEGIPVA 199 Query: 168 TGIAFANKYRRSD---------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 TG AFA KYR + + FGDG N GQ +E N+A LW L +++V+ENN Sbjct: 200 TGAAFAAKYRHEVLKESGPDGLDVTLAFFGDGTCNNGQFFECLNMAQLWKLPIVFVVENN 259 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +A+G S RA++ K+G SF +PG+ VDGMD+ V+ +A+ R +GP ++E Sbjct: 260 LWAIGMSHLRATSDPEIWKKGPSFGMPGVHVDGMDVLKVREVAKEAIERARRGEGPTLVE 319 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYR+RGHS++DP R +E + DPI ++K ++ A+E +LK IE + Sbjct: 320 CETYRFRGHSLADPDELRKPDEKTHYAAR-DPITALKKYIIEENLATESELKSIEKKIDD 378 Query: 339 IINNSVEFAQSDKEPDPAELYSDIL 363 ++ +VEFA + P ++L ++ Sbjct: 379 VVEEAVEFADASPHPPRSQLLENVF 403 >gi|168184719|ref|ZP_02619383.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum Bf] gi|237794971|ref|YP_002862523.1| TPP-dependent acetoin dehydrogenase complex, E1 component subunit alpha [Clostridium botulinum Ba4 str. 657] gi|182672210|gb|EDT84171.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum Bf] gi|229261745|gb|ACQ52778.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum Ba4 str. 657] Length = 327 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 126/319 (39%), Positives = 189/319 (59%), Gaps = 1/319 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + N+ + Y+ ML IR+FE+ A + G + GF HL IG+EAV G+ +L + D Sbjct: 1 MKKLNENSIVEMYKTMLKIRKFEQVAMNTFAEGKIPGFVHLYIGEEAVATGVCANLKDSD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGHILA G D +MAEL G+ G KGKGGSMH+ G G +GIVGA Sbjct: 61 YITSTHRGHGHILAKGGDLKFMMAELFGKVTGYCKGKGGSMHIADATKGILGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 ++ G + +YR +D++CV FGD + NQG +ES N+A++W L V++V ENN Y + Sbjct: 121 HNIAVGAGLSAQYRGTDQVCVCFFGDASTNQGTFHESLNMASVWKLPVVFVCENNLYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S +R A + + RGV++N+PG+ VDG D+ AV +A+ R KGP +IE TYR Sbjct: 181 MSQNRHQAIKDVADRGVAYNVPGIVVDGNDVFAVYEAAKEAIKRAREGKGPTLIECKTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGH DP Y+ E E + DPI + K L+ N+ +E +LKE++ V I+ + Sbjct: 241 HRGHFEGDPCVYKPTAEQEEWLAK-DPIPRFEKYLVENEILTEEELKEVQNKVEGEIDEA 299 Query: 344 VEFAQSDKEPDPAELYSDI 362 V+FA + P+ + D+ Sbjct: 300 VDFANNSPYPELESVLEDV 318 >gi|229128118|ref|ZP_04257100.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BDRD-Cer4] gi|228655393|gb|EEL11249.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BDRD-Cer4] Length = 332 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ PD EL D+ + Sbjct: 310 EFSENSPYPDDEELLKDVYV 329 >gi|30020900|ref|NP_832531.1| acetoin dehydrogenase E1 component alpha-subunit [Bacillus cereus ATCC 14579] gi|29896453|gb|AAP09732.1| Acetoin dehydrogenase E1 component alpha-subunit [Bacillus cereus ATCC 14579] Length = 332 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKPVDEAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ PD EL D+ + Sbjct: 310 EFSENSPYPDDEELLKDVYV 329 >gi|126696811|ref|YP_001091697.1| pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. MIT 9301] gi|126543854|gb|ABO18096.1| Pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. MIT 9301] Length = 357 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 126/331 (38%), Positives = 199/331 (60%), Gaps = 9/331 (2%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 I L+ + +E ++ L Y M L RRFE+K ++Y G + GF HL GQEA+ G+ Sbjct: 20 ISNLQDIKKAELDRATGLFLYEDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAISTGV 79 Query: 96 KMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 ++ + D + YR+H H L+ GV + ++M+EL G+ G SKG+GGSMH+FS ++ Sbjct: 80 IGAMKKKHDWFCSTYRDHVHALSAGVPSFEVMSELFGKATGCSKGRGGSMHLFSREHHLL 139 Query: 155 GGHGIVGAQVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALW 207 GG+ +G + + G AF++KY++ SD + FGDG N GQ +E N+A LW Sbjct: 140 GGYAFIGEGIPVALGAAFSSKYKKEVAGNSDSDAVTAAFFGDGTCNNGQFFECLNMAQLW 199 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 L +I+V+ENN++A+G + RA++ ++ +F + G +VDGMD+ AV+ +A+ Sbjct: 200 KLPIIFVVENNKWAIGMAHDRATSNPEIWRKASAFGMHGEEVDGMDVLAVRGAAQRAIER 259 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 RA +GP ++E LTYRYRGHS++DP R+ +E E DPI+++ K ++ K+A+E Sbjct: 260 ARAGEGPTLLECLTYRYRGHSLADPDELRSEKE-KEFWGKRDPIKKLAKEIIDGKFATEE 318 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +LK IE + I+ SV+ A EP EL Sbjct: 319 ELKVIEKKIDAEISESVKNAIEAPEPPSEEL 349 >gi|157413849|ref|YP_001484715.1| pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. MIT 9215] gi|157388424|gb|ABV51129.1| Pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. MIT 9215] Length = 357 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 123/328 (37%), Positives = 200/328 (60%), Gaps = 9/328 (2%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L+ + ++ ++E L Y M L RRFE+K ++Y G + GF HL GQEA+ G+ + Sbjct: 23 LQDIKKAKLDRETGLFLYEDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAISTGVIGA 82 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 + + D + YR+H H L+ GV + ++M+EL G+ G SKG+GGSMH+FS ++ GG+ Sbjct: 83 MKKKHDWFCSTYRDHVHALSAGVPSFEVMSELFGKATGCSKGRGGSMHLFSKEHHLLGGY 142 Query: 158 GIVGAQVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 +G + + G AF++KY++ SD + FGDG N GQ +E N+A LW L Sbjct: 143 AFIGEGIPVALGAAFSSKYKKEVAGNSTSDAVTAAFFGDGTCNNGQFFECLNMAQLWKLP 202 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +I+V+ENN++A+G + RA++ ++ +F + G ++DGMD+ AV+ +A+ RA Sbjct: 203 IIFVVENNKWAIGMAHDRATSNPEIWRKAAAFGMQGEEIDGMDVLAVRGAAQRAIERARA 262 Query: 271 HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 +GP ++E LTYRYRGHS++DP R+ +E E DPI+++ + +++ K+A+E +LK Sbjct: 263 GEGPTLLECLTYRYRGHSLADPDELRSEKE-KEFWGKRDPIKKLAQEIINGKFATEEELK 321 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDPAEL 358 IE + I+ SV+ A EP EL Sbjct: 322 IIEKRIDTEISESVKNAIEAPEPPSQEL 349 >gi|319781196|ref|YP_004140672.1| pyruvate dehydrogenase (acetyl-transferring) [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167084|gb|ADV10622.1| Pyruvate dehydrogenase (acetyl-transferring) [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 342 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 131/337 (38%), Positives = 196/337 (58%), Gaps = 6/337 (1%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 +A +A T+S ++PF+ +++ EQ M L+RRFEE A + Y G++ G Sbjct: 2 ATASKAVTNSR--ANLPFV----YRQYSAEQLKQVLHKMYLVRRFEEGAEECYTRGLIHG 55 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 HL IGQEA +G+ M L E DQ+ + +R HGH +A G + ++ AE G+ G KG+ Sbjct: 56 TMHLSIGQEASAMGICMPLAEDDQITSTHRGHGHCIAKGAEVKRMFAEFFGKTTGYCKGR 115 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMH+ G G +GIVG + + G A ++K ++ K+ V FGDGA N+G +E+ Sbjct: 116 GGSMHIADVGKGNLGANGIVGGGIPIAVGAALSSKMMKTGKVVVSFFGDGANNEGAFHEA 175 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+W L VI+V ENN Y M TS +R++A N ++R ++++PG+ V+G V Sbjct: 176 LNMAAVWKLPVIFVCENNGYGMSTSTARSTAVKNIAERAAAYSMPGVIVNGNIFSEVAEA 235 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 +AVA RA +GP +IE TYR+RGHS SD YRT+EEI + SN DPI L Sbjct: 236 SHQAVARARAGEGPTLIESKTYRHRGHSKSDRNRYRTKEEIEDWMSNRDPITLFESELRE 295 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 + + ++ I V + I +EFA++ PD +E Sbjct: 296 FGFIDDKGIEAIRDAVAQEIAEGIEFAKASPSPDISE 332 >gi|123969019|ref|YP_001009877.1| pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. AS9601] gi|123199129|gb|ABM70770.1| Pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. AS9601] Length = 357 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 125/328 (38%), Positives = 198/328 (60%), Gaps = 9/328 (2%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L+ + +E ++E L Y M L RRFE+K ++Y G + GF HL GQEA+ G+ + Sbjct: 23 LQDIKKAELDRETGLFLYEDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAISTGVIGA 82 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 + + D + YR+H H L+ GV + ++M+EL G+ G SKG+GGSMH+FS ++ GG+ Sbjct: 83 MKKKHDWFCSTYRDHVHALSAGVPSFEVMSELFGKSTGCSKGRGGSMHLFSREHHLLGGY 142 Query: 158 GIVGAQVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 +G + + G AF++KY++ SD + FGDG N GQ +E N+A LW L Sbjct: 143 AFIGEGIPVALGAAFSSKYKKEVAGNSNSDAVTAAFFGDGTCNNGQFFECLNMAQLWKLP 202 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +I+V+ENN++A+G + RA++ ++ +F + G +VDGMD+ AV+ +A+ RA Sbjct: 203 IIFVVENNKWAIGMAHDRATSNPEIWRKASAFGMHGEEVDGMDVLAVRGAAQRAIERARA 262 Query: 271 HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 +GP ++E LTYRYRGHS++DP R+ +E E DPI+++ + ++ K+A+E +LK Sbjct: 263 GEGPTLLECLTYRYRGHSLADPDELRSEKE-KEFWGKRDPIKKLAQEIIDGKFATEEELK 321 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDPAEL 358 IE + I SV+ A EP EL Sbjct: 322 IIEKKIDAEIAESVKNAIEAPEPPSEEL 349 >gi|134098969|ref|YP_001104630.1| pyruvate dehydrogenase E1 component,alpha subunit [Saccharopolyspora erythraea NRRL 2338] gi|291006791|ref|ZP_06564764.1| pyruvate dehydrogenase E1 component,alpha subunit [Saccharopolyspora erythraea NRRL 2338] gi|133911592|emb|CAM01705.1| probable pyruvate dehydrogenase E1 component,alpha subunit [Saccharopolyspora erythraea NRRL 2338] Length = 312 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 120/291 (41%), Positives = 176/291 (60%), Gaps = 1/291 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ IRRFEE+ +LY + GF HL IG+EAV G+ SL + D +++ YREHGH LA Sbjct: 5 MVRIRRFEERCVELYSAAEIRGFMHLYIGEEAVAAGLMQSLGDEDAVVSTYREHGHALAR 64 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GV S +MAE+ GR G S+G+GGSMH+F FYGG+ IVG + + G+A A+ R Sbjct: 65 GVPMSSVMAEMFGRATGCSRGRGGSMHLFDVARRFYGGNAIVGGGLPIAVGLALADAMRG 124 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ FGDGA +G+ +E N+AALW L V++ ENN YAMGT+++RA A+ + + R Sbjct: 125 HPRVTACLFGDGAVAEGEFHECLNLAALWRLPVLFCCENNLYAMGTALARAQAEVDLALR 184 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 S+ +P VDGM++ V ++AV RA GP +E+ TYR+R HSM D YR + Sbjct: 185 ASSYGMPSWAVDGMEVETVAGASNRAVEAMRAGGGPCFLELRTYRFRAHSMYDAERYRDK 244 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 E+ + DPI+Q+ R+ + L+ +E V ++ +V AQ+ Sbjct: 245 AEVERWK-QFDPIDQLTARMREAGELTADGLQALESEVAGELDQAVAEAQA 294 >gi|218897798|ref|YP_002446209.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus G9842] gi|228965715|ref|ZP_04126795.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar sotto str. T04001] gi|218545397|gb|ACK97791.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus G9842] gi|228793974|gb|EEM41497.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar sotto str. T04001] Length = 332 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y+ ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYKKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIANRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+ Sbjct: 250 YGHFEGEAQTYKTTEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ PD EL D+ + Sbjct: 310 EFSENSPYPDDEELLKDVYV 329 >gi|30468172|ref|NP_849059.1| pyruvate dehydrogenase E1 component alpha subunit [Cyanidioschyzon merolae strain 10D] gi|30409272|dbj|BAC76221.1| pyruvate dehydrogenase E1 component alpha subunit [Cyanidioschyzon merolae strain 10D] Length = 318 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 121/306 (39%), Positives = 188/306 (61%), Gaps = 6/306 (1%) Query: 52 ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 +L YR M+L R+FE++ Q+Y G + GF HL GQEAV G+ +L E D + + YR+ Sbjct: 3 QLKLYRDMVLGRKFEDQCAQMYYRGKMFGFVHLYNGQEAVSTGVIQALAEHDYVCSTYRD 62 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 H H L+ GV ++MAEL G+Q G SKG+GGSMH+FS + F GG +G + + G A Sbjct: 63 HVHALSKGVSPKEVMAELFGKQTGCSKGRGGSMHLFSAPHRFLGGFAFIGEGIPIALGAA 122 Query: 172 FANKYRRSD-----KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 F++ Y+ + + FGDG +N GQ YE N+A LW L +I+V+ENNQ+A+G + Sbjct: 123 FSSLYQHNLWGVPMSVTACFFGDGTSNNGQFYECLNMAVLWKLPMIFVVENNQWAIGMAH 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R++++ ++ F +P ++VDGMD+ AV +AV R+ KGP +IE LTYR+RG Sbjct: 183 HRSTSEVEIYEKAKMFGMPALEVDGMDVLAVHEVAKEAVERARSAKGPTLIEALTYRFRG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS++DP R +++ + DPI Q+ L+ + ++ L +I + II+++V+F Sbjct: 243 HSLADPDELRAKQQ-KAIWMARDPITQLSSWLIEQELVTQEQLDKIHREIDIIISDAVQF 301 Query: 347 AQSDKE 352 A S +E Sbjct: 302 ALSSEE 307 >gi|125547024|gb|EAY92846.1| hypothetical protein OsI_14647 [Oryza sativa Indica Group] Length = 425 Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 122/325 (37%), Positives = 186/325 (57%), Gaps = 10/325 (3%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +E+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L + D +++ Sbjct: 74 TREEALELYEDMVLGRIFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLNQADCVVS 133 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A +MAEL G+ G +G+GGSMHMFS + GG +G + + Sbjct: 134 TYRDHVHALSKGVPARSVMAELFGKATGCCRGQGGSMHMFSEPHNLLGGFAFIGEGIPVA 193 Query: 168 TGIAFANKYRRSD---------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 TG AFA KYR + + FGDG N GQ +E N+A LW L +++V+ENN Sbjct: 194 TGAAFAAKYRHEVLKQSSPDGLDVTLAFFGDGTCNNGQFFECLNMAQLWKLPIVFVVENN 253 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +A+G S RA++ K+G +F +PG+ VDGMD+ V+ +A+ R +GP ++E Sbjct: 254 LWAIGMSHLRATSDPEIYKKGPAFGMPGVHVDGMDVLKVREVAKEAIERARRGEGPTLVE 313 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYR+RGHS++DP R +E + + DPI ++K ++ A+E +LK IE + Sbjct: 314 CETYRFRGHSLADPDELRKPDEKSHY-AARDPITALKKYIIEQNLATESELKSIEKKIDD 372 Query: 339 IINNSVEFAQSDKEPDPAELYSDIL 363 ++ +VEFA + P ++L ++ Sbjct: 373 VVEEAVEFADASPLPPRSQLLENVF 397 >gi|221633471|ref|YP_002522696.1| TPP-dependent acetoin dehydrogenase subunit alpha [Thermomicrobium roseum DSM 5159] gi|221156155|gb|ACM05282.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Thermomicrobium roseum DSM 5159] Length = 330 Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 123/319 (38%), Positives = 185/319 (57%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +++ L Y M LIR FE++ QL+ G + GF HL G+EA+ VG+ LT+ D + Sbjct: 2 EIPRDKLLWIYERMALIRAFEDRVAQLFAAGRIPGFVHLYAGEEAIAVGVCAHLTDRDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GVD + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHCIAKGVDVAAMMAELFGKATGVCKGKGGSMHIADVDKGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G K +D++ V FGDGAA QG +E+ N+AA+W L V++V ENN YA T Sbjct: 122 IACGAGLMAKTLGTDQVAVCFFGDGAAEQGTTHEAMNLAAIWKLPVVFVCENNLYAESTP 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + A + + R ++++PG+ VDG D+ AV +A+A R +GP ++E +RY Sbjct: 182 WTYHCAAPDIASRASAYDMPGVLVDGTDVFAVYEAAGEAIARARRGEGPTLLECRAFRYY 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YRT EE R+ DPI++ R+ +L SE +L +I+ V++ + +V Sbjct: 242 GHFQGDAVTYRTPEEEASYRAR-DPIQRFRQTVLSQGLLSEDELDKIDRAVKQQVEEAVR 300 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+S P P E +D+ + Sbjct: 301 FAESSPLPPPEECLTDVYV 319 >gi|229190875|ref|ZP_04317866.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus ATCC 10876] gi|228592543|gb|EEK50371.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus ATCC 10876] Length = 332 Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQACWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ PD EL D+ + Sbjct: 310 EFSENSPYPDDEELLKDVYV 329 >gi|77165576|ref|YP_344101.1| dehydrogenase, E1 component [Nitrosococcus oceani ATCC 19707] gi|254433643|ref|ZP_05047151.1| pyruvate dehydrogenase E1 component, alpha subunit [Nitrosococcus oceani AFC27] gi|76883890|gb|ABA58571.1| Dehydrogenase, E1 component [Nitrosococcus oceani ATCC 19707] gi|207089976|gb|EDZ67247.1| pyruvate dehydrogenase E1 component, alpha subunit [Nitrosococcus oceani AFC27] Length = 339 Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 130/314 (41%), Positives = 189/314 (60%), Gaps = 9/314 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ------MITAYR 110 R M+ RRFE+++ + Y VGGF HL GQEAV G+ + + + D+ IT YR Sbjct: 11 REMVFFRRFEDRSFEAYMERKVGGFLHLYSGQEAVATGV-LEMVQADRGVGFDYAITGYR 69 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 +H H + G A ++MAEL G++ G S+G+GGSMH+F F GG+ +VG L G+ Sbjct: 70 DHIHAIKAGAPAREVMAELYGKETGSSRGRGGSMHIFDPSVRFMGGYALVGQPFPLAAGL 129 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A K+++ +I V GDGA NQG +E+ N+A+LW L V++V ENN YA+GT + R++ Sbjct: 130 ALACKHQKEGRIAVCFLGDGANNQGTFHETMNMASLWKLPVLFVCENNCYAIGTVIQRST 189 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A + KR ++NIP Q G DI V A+A+ R+ GP +E LTYRYRGHSMS Sbjct: 190 AVIDQYKRLEAYNIPASQHPGQDIEVVMEAAQSAIAHVRSGAGPYFLEFLTYRYRGHSMS 249 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS-VEFAQS 349 D YR++EE+ E DPI+ + KRL+ +E + K +E V+ I+N ++FA+ Sbjct: 250 DAGAYRSKEEVAEW-MQRDPIQILAKRLIEAGELTEEEFKAMEQAVQSEIDNDIIQFAEE 308 Query: 350 DKEPDPAELYSDIL 363 EP A+L +L Sbjct: 309 SPEPKVADLAKYVL 322 >gi|322818032|gb|EFZ25563.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Trypanosoma cruzi] Length = 378 Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 143/354 (40%), Positives = 212/354 (59%), Gaps = 11/354 (3%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 + +NP K D +P + ++ EQ +M IRR E Q Y Sbjct: 15 IPINPQKPFKLHTAGRDDVPPVP-----TTATYDTEQMKKCLEMMFRIRRMESLCDQSYK 69 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 + + GFCHL IGQEA+ VGM+ LT D ++TAYR+H + G ++ AE+ G++G Sbjct: 70 LKKIRGFCHLYIGQEAIPVGMENVLTLEDLIVTAYRDHAWYIVRGGTPGEVFAEMFGKEG 129 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA 191 G SKGKGGSMHM+S KN F+GG+GIVGAQV +G G+ + DK + V +GDGA Sbjct: 130 GCSKGKGGSMHMYSVKNNFFGGNGIVGAQVPIGAGLGWRFALENRDKPRNVAVTFYGDGA 189 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 ANQGQV+E+ NIAA+ + VI+ ENNQ+ MGTS RA+ Q +RG IPG+QVDG Sbjct: 190 ANQGQVFEAMNIAAIHRIPVIFCCENNQFGMGTSKERAAYQPEMYRRGDY--IPGLQVDG 247 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDP 310 MD+ AV+ A +C + KGP+++E +YRY GHSMSDP + YR + +I ++R D Sbjct: 248 MDVLAVQEGTRWAKEWCLSGKGPVVLEFDSYRYVGHSMSDPDSQYRKKSDIQDVRKTRDC 307 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 I +++ +L ++ ++K++E +V+K ++ + A+ +EL++DI I Sbjct: 308 IHKMKDFMLGEGIMTDEEMKKLEKDVKKEVDQQLLPAEKQNPTPRSELFTDIYI 361 >gi|115456930|ref|NP_001052065.1| Os04g0119400 [Oryza sativa Japonica Group] gi|38344868|emb|CAE01294.2| OSJNBa0020P07.11 [Oryza sativa Japonica Group] gi|113563636|dbj|BAF13979.1| Os04g0119400 [Oryza sativa Japonica Group] gi|125589167|gb|EAZ29517.1| hypothetical protein OsJ_13591 [Oryza sativa Japonica Group] gi|215697370|dbj|BAG91364.1| unnamed protein product [Oryza sativa Japonica Group] Length = 425 Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 122/325 (37%), Positives = 186/325 (57%), Gaps = 10/325 (3%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +E+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L + D +++ Sbjct: 74 TREEALELYEDMVLGRIFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLNQADCVVS 133 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A +MAEL G+ G +G+GGSMHMFS + GG +G + + Sbjct: 134 TYRDHVHALSKGVPARSVMAELFGKATGCCRGQGGSMHMFSEPHNLLGGFAFIGEGIPVA 193 Query: 168 TGIAFANKYRRSD---------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 TG AFA KYR + + FGDG N GQ +E N+A LW L +++V+ENN Sbjct: 194 TGAAFAAKYRHEVLKQSSPDGLDVTLAFFGDGTCNNGQFFECLNMAQLWKLPIVFVVENN 253 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +A+G S RA++ K+G +F +PG+ VDGMD+ V+ +A+ R +GP ++E Sbjct: 254 LWAIGMSHLRATSDPEIYKKGPAFGMPGVHVDGMDVLKVREVAKEAIERARRGEGPTLVE 313 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYR+RGHS++DP R +E + + DPI ++K ++ A+E +LK IE + Sbjct: 314 CETYRFRGHSLADPDELRRPDEKSHY-AARDPITALKKYIIEQNLATESELKSIEKKIDD 372 Query: 339 IINNSVEFAQSDKEPDPAELYSDIL 363 ++ +VEFA + P ++L ++ Sbjct: 373 VVEEAVEFADASPLPPRSQLLENVF 397 >gi|240171522|ref|ZP_04750181.1| pyruvate dehydrogenase E1 component (alpha subunit) [Mycobacterium kansasii ATCC 12478] Length = 335 Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 128/313 (40%), Positives = 186/313 (59%), Gaps = 3/313 (0%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYR 110 QEL A M+ +RR EEK +LY + GF HL +G+EAV G +L E D ++ YR Sbjct: 8 QELLAD--MVRVRRMEEKCAELYSAAKIRGFLHLYVGEEAVAAGSLRALAEDDAVVATYR 65 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 EH H L G+ + IMAE+ G+Q G S+G+GGSMH+F FYGG+ IV + L G+ Sbjct: 66 EHAHALLRGIPMTSIMAEMFGKQEGCSRGRGGSMHLFDKSRRFYGGNAIVAGGLPLAVGV 125 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A+ + +++ FGDGA +G +ES N+AALWNL V+++ ENN YAMGT++ RA Sbjct: 126 ALADAMLKRNRVTACYFGDGAVAEGAFHESLNMAALWNLPVLFLCENNLYAMGTALDRAQ 185 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 +QT+ + + S+ +P + VDGMD+ A + V + R GP IE TYR+R HSM Sbjct: 186 SQTDLTVKAASYKVPTLAVDGMDVEACLNATQQGVDHVRNTGGPFFIEFRTYRFRAHSMF 245 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 DP YR + E+ R DPI ++ L + ++ D++EIE I +V +A++ Sbjct: 246 DPELYRDKAEVQRWR-ERDPIRLFTEQCLDSGTLTDDDVREIEDAAAAEIEAAVAYAEAG 304 Query: 351 KEPDPAELYSDIL 363 DPA+L D+L Sbjct: 305 TWEDPADLARDVL 317 >gi|124023659|ref|YP_001017966.1| pyruvate dehydrogenase E1 subunit alpha [Prochlorococcus marinus str. MIT 9303] gi|123963945|gb|ABM78701.1| Pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. MIT 9303] Length = 363 Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 120/314 (38%), Positives = 189/314 (60%), Gaps = 9/314 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYRE 111 L +R M L RRFE+K ++Y G + GF HL GQEAV G+ ++ + D + YR+ Sbjct: 43 LELFRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIGAMKRQHDWFCSTYRD 102 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG +G + + G A Sbjct: 103 HVHALSAGVPAREVMSELFGKETGCSKGRGGSMHLFSQEHHLLGGFAFIGEGIPIALGAA 162 Query: 172 FANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 F ++Y+R S+ + FGDG N GQ +E N+A LW L +++V+ENN++A+G Sbjct: 163 FTSRYKRDALGDASSNAVTAAFFGDGTCNNGQFFECLNMAQLWQLPILFVVENNKWAIGM 222 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + RA+++ ++ +F + G +VDGMD+ AV+A +A+ RA +GP ++E LTYR+ Sbjct: 223 AHERATSEPEIWQKAAAFGMAGEEVDGMDVLAVRAATQRAIKRARAGEGPTLLECLTYRF 282 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHS++DP R EE + + DP++ + K L +L+ IE + +N+ V Sbjct: 283 RGHSLADPDELRAEEE-KQFWAKRDPLKALEKDLTSESLVRADELRAIEKEIDAEVNDCV 341 Query: 345 EFAQSDKEPDPAEL 358 EFA + EP+ EL Sbjct: 342 EFALAAAEPNANEL 355 >gi|254973687|ref|ZP_05270159.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile QCD-66c26] gi|255091078|ref|ZP_05320556.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile CIP 107932] gi|255099194|ref|ZP_05328171.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile QCD-63q42] gi|255304977|ref|ZP_05349149.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile ATCC 43255] gi|255312732|ref|ZP_05354315.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile QCD-76w55] gi|255515493|ref|ZP_05383169.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile QCD-97b34] gi|255648585|ref|ZP_05395487.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile QCD-37x79] gi|306518712|ref|ZP_07405059.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile QCD-32g58] Length = 320 Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 122/316 (38%), Positives = 188/316 (59%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE L Y+ M R+FEEK + GMV G HL +GQEA V M+L +GD + Sbjct: 3 ISKETLLEMYKRMNQARKFEEKVSWFFARGMVHGTTHLSVGQEASSVAAVMALEKGDLVS 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +R H + G+D +K+MAEL G++ G KGKGGSMH+ ++G G +G+VG +++ Sbjct: 63 LTHRGHSQFIGMGIDLNKMMAELMGKETGFCKGKGGSMHIADIESGNLGANGVVGGGLTI 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A +Y+++ KI + FGDGA+N+G +E N++++W L +I+ ENN Y M TS+ Sbjct: 123 APGAALTQQYKKTGKIVLCSFGDGASNEGTFHEGINLSSIWKLPIIFYCENNLYGMSTSI 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R + + R S+ I G+ +DG + V T+ KA CR +GP++IE TYR+ G Sbjct: 183 KRHMNIESIATRAASYGIEGISIDGYNPIEVYETVQKAAEKCRRGEGPVLIESRTYRWLG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS SD YRT+EEI ++ DPIE ++ L+ N ++E +L +I+ ++ I ++VEF Sbjct: 243 HSKSDANVYRTKEEIESWKAK-DPIEFLKNYLIENNLSNEDELDKIQEFAKQSIEDAVEF 301 Query: 347 AQSDKEPDPAELYSDI 362 AQ+ P L D+ Sbjct: 302 AQNSPNPKIESLLEDV 317 >gi|126697602|ref|YP_001086499.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Clostridium difficile 630] gi|260681805|ref|YP_003213090.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Clostridium difficile CD196] gi|260685402|ref|YP_003216535.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Clostridium difficile R20291] gi|115249039|emb|CAJ66850.1| Acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Clostridium difficile] gi|260207968|emb|CBA60107.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile CD196] gi|260211418|emb|CBE01506.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile R20291] Length = 322 Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 122/316 (38%), Positives = 188/316 (59%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE L Y+ M R+FEEK + GMV G HL +GQEA V M+L +GD + Sbjct: 5 ISKETLLEMYKRMNQARKFEEKVSWFFARGMVHGTTHLSVGQEASSVAAVMALEKGDLVS 64 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +R H + G+D +K+MAEL G++ G KGKGGSMH+ ++G G +G+VG +++ Sbjct: 65 LTHRGHSQFIGMGIDLNKMMAELMGKETGFCKGKGGSMHIADIESGNLGANGVVGGGLTI 124 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A +Y+++ KI + FGDGA+N+G +E N++++W L +I+ ENN Y M TS+ Sbjct: 125 APGAALTQQYKKTGKIVLCSFGDGASNEGTFHEGINLSSIWKLPIIFYCENNLYGMSTSI 184 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R + + R S+ I G+ +DG + V T+ KA CR +GP++IE TYR+ G Sbjct: 185 KRHMNIESIATRAASYGIEGISIDGYNPIEVYETVQKAAEKCRRGEGPVLIESRTYRWLG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS SD YRT+EEI ++ DPIE ++ L+ N ++E +L +I+ ++ I ++VEF Sbjct: 245 HSKSDANVYRTKEEIESWKAK-DPIEFLKNYLIENNLSNEDELDKIQEFAKQSIEDAVEF 303 Query: 347 AQSDKEPDPAELYSDI 362 AQ+ P L D+ Sbjct: 304 AQNSPNPKIESLLEDV 319 >gi|229046474|ref|ZP_04192129.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH676] gi|229145353|ref|ZP_04273742.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BDRD-ST24] gi|228638192|gb|EEK94633.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BDRD-ST24] gi|228724836|gb|EEL76138.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH676] Length = 332 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDN 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ PD EL D+ + Sbjct: 310 EFSENSPYPDDEELLKDVYV 329 >gi|295704000|ref|YP_003597075.1| acetoin dehydrogenase E1 component subunit alpha [Bacillus megaterium DSM 319] gi|294801659|gb|ADF38725.1| acetoin dehydrogenase E1 component, alpha subunit [Bacillus megaterium DSM 319] Length = 330 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 123/322 (38%), Positives = 185/322 (57%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + + KE+ Y+ M+ IR+FE++ Q++ G++ GF HL G+EA+ VGM L + Sbjct: 7 KTEKLTKEKASWMYQKMVEIRKFEDEVHQIFAKGVLPGFVHLYAGEEAIAVGMCAHLNDS 66 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HGH +A G D +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 67 DSITSTHRGHGHCIAKGGDLDGMMAELFGKVTGLGKGKGGSMHIADLDKGILGANGIVGG 126 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 L G A KY+++ + V FGDGA N+G +E N+AA+W L V++V ENN Y Sbjct: 127 GFPLACGSALTAKYKKTKDVSVCFFGDGAGNEGTFHEGINLAAIWKLPVVFVAENNGYGE 186 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S AS+ + + R S+NIPG++VDG D+ AV +A+ R +GP +IE +TY Sbjct: 187 ATPFSYASSCSTIADRAASYNIPGVRVDGKDVMAVYEAAAEAIQRARRGEGPTLIECVTY 246 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D Y++ E E D I LL + +E +L++IE +V K + Sbjct: 247 RNYGHFEGDAQTYKSGSEKKEHLQEKDAIALFENYLLSEQVVTEKELRDIEGDVEKAVKR 306 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 +VE A++ PD +EL +D+ + Sbjct: 307 AVELAETSDYPDASELLTDVYV 328 >gi|168047071|ref|XP_001775995.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672653|gb|EDQ59187.1| predicted protein [Physcomitrella patens subsp. patens] Length = 440 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 126/323 (39%), Positives = 187/323 (57%), Gaps = 8/323 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 K++ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L + D + + Sbjct: 91 TKDEGLELYEDMVLGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKQTDFVTS 150 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A ++MAEL G+ G +G+GGSMHMFS ++G GG +G + + Sbjct: 151 TYRDHVHALSKGVPARQVMAELFGKSTGCCRGQGGSMHMFSAEHGLLGGFAFIGEGIPVA 210 Query: 168 TGIAFANKYRRSD-------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 G AF +KY+R + + FGDG AN GQ +E N+A LW L VI+V+ENN + Sbjct: 211 VGAAFTSKYKREVLKEEGDMPVSIAFFGDGTANNGQFFECLNMAQLWKLPVIFVVENNLW 270 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+G S R+++ K+G +F + VDGMD+ V+ +AV R GP +IE Sbjct: 271 AIGMSHYRSTSDPEIWKKGPAFGMASAHVDGMDVLKVREVAKEAVERARRGDGPTLIECE 330 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYR+RGHS++DP R E + DPI ++K LL N+ A+E +LK IE + +++ Sbjct: 331 TYRFRGHSLADPDELRAPAE-KAHYAARDPIVALKKYLLDNEIATEAELKSIEKKIDEVV 389 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 ++VEFA + P ++L ++ Sbjct: 390 EDAVEFADASPLPGRSQLLENVF 412 >gi|206971744|ref|ZP_03232693.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus AH1134] gi|228921447|ref|ZP_04084770.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228953107|ref|ZP_04115167.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229079966|ref|ZP_04212497.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock4-2] gi|229150987|ref|ZP_04279198.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus m1550] gi|229179062|ref|ZP_04306419.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus 172560W] gi|296503318|ref|YP_003665018.1| acetoin dehydrogenase E1 component subunit alpha [Bacillus thuringiensis BMB171] gi|206733129|gb|EDZ50302.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus AH1134] gi|228604430|gb|EEK61894.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus 172560W] gi|228632547|gb|EEK89165.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus m1550] gi|228703345|gb|EEL55800.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock4-2] gi|228806613|gb|EEM53172.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228838220|gb|EEM83538.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296324370|gb|ADH07298.1| acetoin dehydrogenase E1 component alpha-subunit [Bacillus thuringiensis BMB171] Length = 332 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ PD EL D+ + Sbjct: 310 EFSENSPYPDDEELLKDVYV 329 >gi|218231470|ref|YP_002367493.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus B4264] gi|218159427|gb|ACK59419.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus B4264] Length = 332 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ PD EL D+ + Sbjct: 310 EFSENSPYPDDEELLKDVYV 329 >gi|228939896|ref|ZP_04102473.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972786|ref|ZP_04133385.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228979370|ref|ZP_04139706.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis Bt407] gi|228780374|gb|EEM28605.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis Bt407] gi|228787001|gb|EEM34981.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228819827|gb|EEM65875.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326940544|gb|AEA16440.1| acetoin dehydrogenase E1 component [Bacillus thuringiensis serovar chinensis CT-43] Length = 332 Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNERDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ PD EL D+ + Sbjct: 310 EFSENSPYPDDEELLKDVYV 329 >gi|254242834|ref|ZP_04936156.1| hypothetical protein PA2G_03601 [Pseudomonas aeruginosa 2192] gi|126196212|gb|EAZ60275.1| hypothetical protein PA2G_03601 [Pseudomonas aeruginosa 2192] Length = 324 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 124/321 (38%), Positives = 184/321 (57%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S + +Q L AYR+M IR FEE+ + G + GF HL G+EA G+ L + D Sbjct: 1 MSTLSTDQLLHAYRVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLRDDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A GVD +MAE+ G++ G+ +GKGGSMH+ + G G +GIVGA Sbjct: 61 CIASTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCQGKGGSMHIADLEKGMLGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 L G A A K + SD + V FGDG +N+G V+E+ N+AA+WNL ++V ENN YA Sbjct: 121 APLAAGSALAAKLKGSDAVAVAFFGDGGSNEGAVFEAMNLAAVWNLPCLFVAENNGYAEA 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+ + + A + + R F +PG+ VDG D AV A+ RA +GP +IE+ R Sbjct: 181 TAANWSVACDHIADRAAGFGMPGVTVDGFDFFAVHEAAGAAIERARAGEGPSLIEVKLTR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 Y GH D YR +E+ R D ++Q R+R H S DL I+ V I ++ Sbjct: 241 YYGHFEGDAQTYRDPDEVKHYRETRDCLKQFRERTCHAGLLSASDLDAIDAEVEARIEDA 300 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V+ A++D +P+P +L D+ + Sbjct: 301 VQRAKNDPKPEPDDLLRDVYV 321 >gi|300113667|ref|YP_003760242.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Nitrosococcus watsonii C-113] gi|299539604|gb|ADJ27921.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Nitrosococcus watsonii C-113] Length = 343 Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 129/314 (41%), Positives = 190/314 (60%), Gaps = 9/314 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG------DQMITAYR 110 R M+ RRFE++A + Y +GGF HL GQEAV G+ + + + D +IT YR Sbjct: 11 REMVFFRRFEDRAFEAYMERKIGGFLHLYSGQEAVATGV-LEVVQAEHGVGFDYVITGYR 69 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 +H H + G A ++MAEL G++ G SKG+GGSMH+F F GG+ +VG L G+ Sbjct: 70 DHIHAIKAGAPAQEVMAELYGKETGSSKGRGGSMHIFDPSVRFMGGYALVGQPFPLAAGL 129 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A K++ +I V G+GA NQG +E+ N+A+LW L V++V ENN+YA+GT++ R++ Sbjct: 130 ALACKHQNEGRIAVCFLGEGANNQGTFHETMNMASLWKLPVLFVCENNRYAIGTAIQRST 189 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A + KR ++NIP Q G DI V AV + R+ GP +E LTYRYRGHSMS Sbjct: 190 AVIDQYKRLEAYNIPASQHLGQDIEVVMEAAQPAVDHVRSGAGPYFLEFLTYRYRGHSMS 249 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS-VEFAQS 349 D YR++EE+ E + DP++ + KRL+ +E + K +E V+ I+N ++FA+ Sbjct: 250 DAGAYRSKEEVAEWK-QQDPLQILAKRLIEAGELTEEEFKAMEQAVQDEIDNDIIKFAEE 308 Query: 350 DKEPDPAELYSDIL 363 EP A+L +L Sbjct: 309 SPEPKVADLTKYVL 322 >gi|11465412|ref|NP_045197.1| pyruvate dehydrogenase E1 component alpha subunit [Cyanidium caldarium] gi|6466315|gb|AAF12897.1|AF022186_19 unknown [Cyanidium caldarium] Length = 338 Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 127/331 (38%), Positives = 197/331 (59%), Gaps = 12/331 (3%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 E ++ + + L+ Y MLL R FE+ Q+Y G + GF HL GQEA+ G+ SL Sbjct: 9 LEANKISSQLALTFYYDMLLGRGFEDACAQMYYRGKMFGFVHLYNGQEAISTGVIKSLKT 68 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D + + YR+H H ++ GV +MAEL G++ G S+G+GGSMH+FS+ + F GG +G Sbjct: 69 TDYVCSTYRDHVHAISKGVPPRSVMAELFGKETGCSRGRGGSMHLFSSFHRFLGGFAFIG 128 Query: 162 AQVSLGTGIAFANKYRRSDKIC--------VVCF-GDGAANQGQVYESFNIAALWNLNVI 212 + + G AF + Y S ++C VCF GDGA N GQ +E N+A LWNL VI Sbjct: 129 EGIPIALGSAFKSMY--SQQVCKSVQELDVTVCFLGDGATNNGQFFECLNMAGLWNLPVI 186 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +V+ENNQ+A+G + R+++Q K+ +F I +VDGMD+ AV T +A+ R Sbjct: 187 FVVENNQWAIGMAHHRSTSQVEIYKKAAAFGINSCEVDGMDVVAVHKTAKEAILKARKGD 246 Query: 273 GPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 GP +IE LTYR+RGHS++DP R++ E ++ + DPI+ + ++ NK S+ L ++ Sbjct: 247 GPTLIEALTYRFRGHSLADPDELRSKNE-KDIWISRDPIKNFQSYVIRNKLLSQKQLIKV 305 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + V + IN++++FA EP +L+ + Sbjct: 306 KDEVTQTINDALQFAIISPEPKLQDLHKYVF 336 >gi|75762698|ref|ZP_00742535.1| Acetoin dehydrogenase E1 component alpha-subunit [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489819|gb|EAO53198.1| Acetoin dehydrogenase E1 component alpha-subunit [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 332 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQAHWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL GR G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGRATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 310 EFSENSPYPEDEELLKDVYV 329 >gi|242399614|ref|YP_002995039.1| Pyruvate dehydrogenase [Thermococcus sibiricus MM 739] gi|242266008|gb|ACS90690.1| Pyruvate dehydrogenase [Thermococcus sibiricus MM 739] Length = 332 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 126/318 (39%), Positives = 179/318 (56%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KE+ L Y M+ IR EE+ +L+ G + GF HL IG+EAV G+ L + D + Sbjct: 3 EIPKEKLLWIYETMVKIREHEERVAELFAQGKIPGFVHLYIGEEAVATGVMAHLRKEDFI 62 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G + MAEL G+ GI KGKGGSMH+ G G +GIVG + Sbjct: 63 TSTHRGHGHFIAKGGNIKASMAELFGKATGICKGKGGSMHIADLDVGELGANGIVGGGIP 122 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A K D + V FGDGA+NQ +E+ N+AA+W L V++V ENN Y + Sbjct: 123 HAVGAALGIKLNGLDNVAVAFFGDGASNQQNFHEAINLAAIWKLPVVFVCENNLYQISLP 182 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S+ A + ++R V++ IPG+ VDG D+ AV +A+ R +GP IIE TYRYR Sbjct: 183 YSKQQAIKSVAERAVAYGIPGVSVDGQDVFAVYEVAKEAIERARNGEGPTIIEAKTYRYR 242 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR++EEI ++N DPI K +L ++ +L + V+K I +++ Sbjct: 243 GHFEGDPQIYRSKEEIEWWKNNKDPITIFEKTVLEKGLLTKEELDAVREKVKKEIEEAIK 302 Query: 346 FAQSDKEPDPAELYSDIL 363 FA+ P P EL D+ Sbjct: 303 FAEESPWPKPEELLEDVF 320 >gi|228908516|ref|ZP_04072356.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis IBL 200] gi|228851069|gb|EEM95883.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis IBL 200] Length = 332 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y+ ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYKKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+ Sbjct: 250 YGHFEGEAQTYKTTEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ P+ EL D+ + Sbjct: 310 EFSENSPYPEDEELLKDVYV 329 >gi|159901146|ref|YP_001547393.1| pyruvate dehydrogenase (acetyl-transferring) [Herpetosiphon aurantiacus ATCC 23779] gi|159894185|gb|ABX07265.1| Pyruvate dehydrogenase (acetyl-transferring) [Herpetosiphon aurantiacus ATCC 23779] Length = 325 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 135/321 (42%), Positives = 199/321 (61%), Gaps = 10/321 (3%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K+ L+ YR M+LIR FEE Q Y +GGF HL +GQEAV VG +L D ++T Sbjct: 3 KQDLLADYRTMVLIRSFEEHCQQQYTRARIGGFLHLYVGQEAVAVGAIGALKAQDHLVTH 62 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HGH LA G++ +MAEL GR G KGKGGSMH F+GG+ IVGA + L Sbjct: 63 YRDHGHALARGLEPKPLMAELFGRSTGTGKGKGGSMHFADKNKNFWGGYAIVGAHLLLAM 122 Query: 169 GIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 GIA++ KY+R D + + FGDGA N G+ YE+ ++AAL+ L ++++ ENN++A Sbjct: 123 GIAYSIKYKREVLGQADQDGVVMCFFGDGATNGGEFYEAVSMAALYKLPIVFLCENNEFA 182 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGT +S ++ T K+ F +PG +V+G D+ ++A AV + R +GP +E +T Sbjct: 183 MGTPLSVHTSVTEIHKKASPF-MPGERVNGNDVEEMRARALYAVNHART-EGPYFLEAMT 240 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR RGHS +DP YRTR++IN RS DPI ++++L+ +E K+I+ V K ++ Sbjct: 241 YRLRGHSAADPQMYRTRDDINARRSG-DPIALLKQKLIDQNLLTEKQAKQIDKEVEKEMD 299 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 V+FA+ PD +E +++I Sbjct: 300 VVVQFAEESPAPDLSEAWTEI 320 >gi|186472595|ref|YP_001859937.1| pyruvate dehydrogenase (acetyl-transferring) [Burkholderia phymatum STM815] gi|184194927|gb|ACC72891.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia phymatum STM815] Length = 327 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 124/320 (38%), Positives = 191/320 (59%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S+ ++E+ L AYRLM IR FEE+ + G + GF HL G+EA VG + L + D Sbjct: 5 SQLSREKLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLNDKDY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ GRQ G+ KGKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVHGMMAEIYGRQTGVCKGKGGSMHIADLSKGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K +++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKLKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + + + N + R F +PG+ VDG D AV + +A+ R GP ++E+ RY Sbjct: 185 SSTWSVSSDNIADRASGFGMPGVIVDGFDFFAVHEALGEAIERARGGGGPTLVEVKLSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D +++ ++R++ + + DL++I+ +V+ +I++SV Sbjct: 245 FGHFEGDAQTYRAPGEVQKLREEKDCLKRFQERVVRAEMLNTDDLRKIDSDVKALIDDSV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ P A+L +D+ + Sbjct: 305 LKAKAAPLPAEADLLTDVYV 324 >gi|294498642|ref|YP_003562342.1| acetoin dehydrogenase E1 component subunit alpha [Bacillus megaterium QM B1551] gi|294348579|gb|ADE68908.1| acetoin dehydrogenase E1 component, alpha subunit [Bacillus megaterium QM B1551] Length = 330 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 123/322 (38%), Positives = 185/322 (57%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + + KE+ Y+ M+ IR+FE++ Q++ G++ GF HL G+EAV VGM L + Sbjct: 7 KTEKLTKEKASWMYQKMVEIRKFEDEVHQIFAKGVLPGFVHLYAGEEAVAVGMCAHLNDS 66 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HGH +A G D +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 67 DSITSTHRGHGHCIAKGGDLDGMMAELFGKVTGLGKGKGGSMHIADLDKGILGANGIVGG 126 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 L G A KY+++ + V FGDGA N+G +E N+AA+W L V++V ENN Y Sbjct: 127 GFPLACGSALTAKYKKTKDVSVCFFGDGAGNEGTFHEGINLAAIWKLPVVFVAENNGYGE 186 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S AS+ + + R S+NIPG++VDG D+ AV +A+ R +GP +IE +TY Sbjct: 187 ATPFSYASSCSAIADRAASYNIPGVRVDGKDVMAVYEAAAEAIQRARRGEGPTLIECVTY 246 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D Y++ E E D I + LL + +E +L++I+ V K + Sbjct: 247 RNYGHFEGDAQTYKSGNEKKEHLQEKDAIALFKNYLLSEQVVTEQELRDIDGEVEKAVKR 306 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 +VE A++ PD +EL +D+ + Sbjct: 307 AVELAETSDYPDASELLTDVYV 328 >gi|51209964|ref|YP_063628.1| pyruvate dehydrogenase E1 component alpha subunit [Gracilaria tenuistipitata var. liui] gi|50657718|gb|AAT79703.1| pyruvate dehydrogenase E1 component alpha subunit [Gracilaria tenuistipitata var. liui] Length = 341 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 127/323 (39%), Positives = 194/323 (60%), Gaps = 10/323 (3%) Query: 45 SEFNKEQE--LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 SE+N L Y+ MLL R FE+ Q+Y G + GF HL GQEAV G+ L + Sbjct: 13 SEYNINSNIVLHLYKDMLLGRCFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGVIKVLQKD 72 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + YR+H H L+ GV A+ IMAEL G++ G S+G+GGSMH+FS + F GG +G Sbjct: 73 DYVCSTYRDHVHALSKGVPANLIMAELFGKETGCSRGRGGSMHIFSAAHNFLGGFAFIGE 132 Query: 163 QVSLGTGIAFANKYRRSD-------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + + G AF + YR+ ++ FGDG +N GQ +E N+A LW L +I+V+ Sbjct: 133 GIPISIGAAFQSVYRKQILNDLQPMRVTACFFGDGTSNNGQFFECLNMAVLWKLPIIFVV 192 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENNQ+A+G + +R+++ K+ +F +PG++VDGMD+ A++ AV R GP Sbjct: 193 ENNQWAIGMAHNRSTSFPEIHKKAEAFGLPGIEVDGMDVLAIREVAISAVDRARFGHGPT 252 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +IE LTYR+RGHS++DP R+ E E DPI++++ + N SE +++++ + Sbjct: 253 LIEALTYRFRGHSLADPDELRSVSE-KEAWLARDPIKRLKNYISDNSLCSEKEVEDVNLA 311 Query: 336 VRKIINNSVEFAQSDKEPDPAEL 358 V+ I+ +VEFA S EP+ +L Sbjct: 312 VKIEIDQAVEFAISSPEPNIKDL 334 >gi|163783827|ref|ZP_02178808.1| dehydrogenase complex, E1 component, alpha subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159880898|gb|EDP74421.1| dehydrogenase complex, E1 component, alpha subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 323 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 132/307 (42%), Positives = 185/307 (60%), Gaps = 3/307 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y LM L R FE +A + Y +GGF HL IG+EA VG + +GD YR+H + Sbjct: 10 YYLMKLGREFELRAKEEYMKRNIGGFLHLAIGEEATHVGAMLGFGKGD-FFVHYRDHVYA 68 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G+ A ++MAEL G+ G+SKGKGGSMH++S++ FYGG+ IVGAQ++ G A+A K Sbjct: 69 LARGMSAKELMAELFGKITGVSKGKGGSMHLYSSRFNFYGGNAIVGAQITHAVGAAYARK 128 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y + +V FGDGA N G YES N+A ++ + V+++ ENN YA+GT + R SA + Sbjct: 129 YLGHMEGVMVAFGDGATNAGNFYESLNLANVYKVPVLFLCENNYYAIGTRIDRVSAFKDL 188 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + + +P +QVDGMD+ AV + KA Y P IE LTYRY HSMSD +Y Sbjct: 189 YMKAKDY-MPAVQVDGMDVFAVFEAVSKAKEYIETEGNPYFIEALTYRYEPHSMSDGGDY 247 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R+ E+ ++ DPIE++ KR L + +E +K + V K I +VEFA +P Sbjct: 248 RSPREL-KIAKERDPIERLIKRGLKEGFLTEEFIKMTDKKVEKEIEEAVEFALKSPKPPL 306 Query: 356 AELYSDI 362 ELY D+ Sbjct: 307 DELYKDV 313 >gi|294102573|ref|YP_003554431.1| Pyruvate dehydrogenase (acetyl-transferring) [Aminobacterium colombiense DSM 12261] gi|293617553|gb|ADE57707.1| Pyruvate dehydrogenase (acetyl-transferring) [Aminobacterium colombiense DSM 12261] Length = 334 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 127/321 (39%), Positives = 191/321 (59%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V +F+KE S Y M+ IR FEEK + + G + GF HL IG+EAV G+ +L + D Sbjct: 14 VRDFDKETLRSLYETMVKIRHFEEKVEEFFFAGEIPGFVHLYIGEEAVAAGVMANLRKTD 73 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A G D +MAE+ G++ G KGKGGSMH+ G G +GIVG Sbjct: 74 YIQSTHRGHGHTIAKGADLKPMMAEIFGKKSGYCKGKGGSMHIADFSIGMLGANGIVGGG 133 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A A K + +D + VV FGDGA+N+G +E N+AA W L VI+V ENN +A Sbjct: 134 FTLAAGAALAQKMQGTDGVSVVFFGDGASNRGTFHEGINLAAAWKLPVIFVCENNHWAST 193 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T +A N + R + ++IPG+ VDG D+ AV + + R GP ++E TYR Sbjct: 194 TPYHTTTAVENIADRALGYDIPGVIVDGNDVFAVYEAAQELIERARRGSGPALLEAKTYR 253 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +GH + DP YRT+EE+ ++ DPI + ++++ S+ +L IE V++ + + Sbjct: 254 IKGHFVGDPEKYRTKEEVQKVFDETDPIPRFEQKVIEGGVMSKEELTAIEEAVKRSVAEA 313 Query: 344 VEFAQSDKEPDPAELYSDILI 364 VEFA++ EP+P EL+ D+ + Sbjct: 314 VEFARNAPEPEPFELFEDLYV 334 >gi|159030836|emb|CAO88515.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 344 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 139/319 (43%), Positives = 203/319 (63%), Gaps = 9/319 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 K + L Y M+L R FE+K ++Y G + GF HL GQEA+ G+ +L +G+ ++ Sbjct: 18 TKAEGLRLYEDMVLGRMFEDKCAEMYYRGKMFGFVHLYNGQEAISSGIVKALRQGEDYVS 77 Query: 108 A-YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS ++ GG+ V + + Sbjct: 78 STYRDHVHALSAGVPAKEVMAELFGKATGCSKGRGGSMHMFSAEHKLLGGYAFVAEGIPV 137 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG AF +KYRR +D++ V FGDGA+N GQ +E N+AALW L +IYV+ENN+ Sbjct: 138 ATGAAFQSKYRREAMGDASADQVTVCFFGDGASNNGQFFECLNMAALWKLPIIYVVENNK 197 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA++Q K+ F++ G++VDGMD+ AV A +AVA RA +GP +IE Sbjct: 198 WAIGMAHDRATSQPEIYKKASVFSMVGVEVDGMDVVAVHAAAREAVARARAGEGPTLIEA 257 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R+ +E + DPI + L A+ +LKEIE ++ Sbjct: 258 LTYRFRGHSLADPDELRSADE-KQFWGERDPITRFAAYLYERDLATREELKEIEEKIQAE 316 Query: 340 INNSVEFAQSDKEPDPAEL 358 I +V+FA+S EPDP+EL Sbjct: 317 IEAAVKFAESSPEPDPSEL 335 >gi|153011434|ref|YP_001372648.1| pyruvate dehydrogenase (acetyl-transferring) [Ochrobactrum anthropi ATCC 49188] gi|151563322|gb|ABS16819.1| Pyruvate dehydrogenase (acetyl-transferring) [Ochrobactrum anthropi ATCC 49188] Length = 345 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 122/316 (38%), Positives = 184/316 (58%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++ EQ A M LIRRFEE A + Y G++ G HL IGQEA +G + L + D + Sbjct: 25 YSPEQLKEALHKMYLIRRFEEGAEESYTRGLIHGTMHLSIGQEASAMGSCLPLNDDDMIT 84 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D ++ AE G++ G KG+GGSMH+ G G +GIVG + + Sbjct: 85 STHRGHGHCIAKGADVKRMFAEFFGKETGYCKGRGGSMHIADVSKGNLGANGIVGGGIPI 144 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A + K +++ K+ V FGDGA N+G +E+ N+AA+W L V+++ ENN Y M TS Sbjct: 145 AVGAALSAKKQKNGKVVVSFFGDGANNEGAFHEALNMAAVWKLPVVFICENNGYGMSTST 204 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R++A N + R ++N+PG+ VDG ++ V +++A R GP +IE TYR RG Sbjct: 205 KRSTAVANVADRASAYNMPGVIVDGNNLSEVAEAVNEATERARRGDGPTLIENKTYRIRG 264 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS SD YRT+EEI + + DPI L + ++ +++ I V K I +++EF Sbjct: 265 HSKSDRNRYRTKEEIEHWQHDRDPIAHFEADLKAYGFINDAEIEAIRAEVEKEIADAIEF 324 Query: 347 AQSDKEPDPAELYSDI 362 A++ PD L D+ Sbjct: 325 AKNSPVPDLTNLTRDV 340 >gi|254478132|ref|ZP_05091515.1| Dehydrogenase E1 component superfamily [Carboxydibrachium pacificum DSM 12653] gi|214035994|gb|EEB76685.1| Dehydrogenase E1 component superfamily [Carboxydibrachium pacificum DSM 12653] Length = 308 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 127/300 (42%), Positives = 179/300 (59%), Gaps = 2/300 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ IR+FE K +LY M+ G HL +G+EA VG ++L D + + +R HGH +A Sbjct: 1 MVQIRQFELKTDELYKKNMIWGTYHLYVGEEAAAVGACVALEPTDYITSTHRGHGHTIAK 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G D ++MAEL G++ G KG+GGSMH+ G G +GIV + + TG A A+K R Sbjct: 61 GADLKRMMAELLGKETGHCKGRGGSMHIADISTGHLGANGIVAGGIPIATGAALASKLRG 120 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ + FGDGAAN G ES N+A +W L V+Y ENNQYAM V++ +A N + R Sbjct: 121 DGRVTLCFFGDGAANTGAFNESLNMAGIWKLPVVYFCENNQYAMSAPVNKFTAVKNIADR 180 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 S+N+PG+ VDG D+ V + +AV R +GP +IE TYR+ GHS SDP YRTR Sbjct: 181 AASYNMPGVIVDGNDVLEVYKAVKEAVDRARKGEGPTLIEAKTYRWFGHSKSDPRVYRTR 240 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 EE E DPI++ ++LL A+E +LK+I+ V K I + +FA EP +L Sbjct: 241 EE--EEWKKKDPIKRFAEKLLSEGVATEEELKKIDEEVAKEIEEAYQFAVESPEPKVEDL 298 >gi|20806712|ref|NP_621883.1| thiamine pyrophosphate-dependent dehydrogenase, E1 component alpha subunit [Thermoanaerobacter tengcongensis MB4] gi|20515167|gb|AAM23487.1| Thiamine pyrophosphate-dependent dehydrogenases, E1 component alpha subunit [Thermoanaerobacter tengcongensis MB4] Length = 333 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 134/313 (42%), Positives = 189/313 (60%), Gaps = 1/313 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 EF+KE+ L Y+ M+ IR+FE K +LY M+ G HL +G+EA VG +L D + Sbjct: 12 EFSKEKLLWMYKKMVQIRQFELKTDELYKKNMIWGTYHLYVGEEAAAVGACAALEPTDYI 71 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D ++MAEL G++ G KG+GGSMH+ G G +GIV + Sbjct: 72 TSTHRGHGHTIAKGADLKRMMAELLGKETGHCKGRGGSMHIADIFTGHLGANGIVAGGIP 131 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + TG A A+K R ++ + FGDGAAN G ES N+AA+W L V+Y ENNQYAM Sbjct: 132 IATGAALASKLRGDKRVTLCFFGDGAANTGAFNESLNMAAIWQLPVVYFCENNQYAMSAP 191 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V++ +A N + R S+N+PG+ VDG D+ V + +AV R +GP +IE TYR+ Sbjct: 192 VNKFTAVKNIADRAASYNMPGVIVDGNDVLEVYKAVKEAVDRARKGEGPTLIEAKTYRWF 251 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS SDP YRTREE E + DPI++ ++LL A+E +LK+I+ V K I + + Sbjct: 252 GHSKSDPRVYRTREEEEEWKKK-DPIKRFAEKLLSEGVATEEELKKIDEEVAKEIEEAYQ 310 Query: 346 FAQSDKEPDPAEL 358 FA EP +L Sbjct: 311 FAVESPEPKVEDL 323 >gi|323305317|gb|EGA59064.1| Pda1p [Saccharomyces cerevisiae FostersB] Length = 338 Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 119/239 (49%), Positives = 163/239 (68%), Gaps = 4/239 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +K L Y+ M++IRR E LY + GFCHL +GQEA+ VG++ ++T+ D + Sbjct: 98 ETSKATLLQMYKDMVIIRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIENAITKLDSI 157 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YR HG G ++AEL GR+ G+S GKGGSMH+++ GFYGG+GIVGAQV Sbjct: 158 ITSYRCHGFTFMRGASVKAVLAELMGRRAGVSYGKGGSMHLYAP--GFYGGNGIVGAQVP 215 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA++Y+ D +GDGA+NQGQV+ESFN+A LWNL V++ ENN+Y MGT+ Sbjct: 216 LGAGLAFAHQYKNEDACSFTLYGDGASNQGQVFESFNMAKLWNLPVVFCCENNKYGMGTA 275 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SR+SA T + KRG IPG++V+GMDI AV A +C + KGP+++E TYRY Sbjct: 276 ASRSSAMTEYFKRGQ--YIPGLKVNGMDILAVYQASKFAKDWCLSGKGPLVLEYETYRY 332 >gi|224372803|ref|YP_002607175.1| pyruvate dehydrogenase E1 component, alpha subunit [Nautilia profundicola AmH] gi|223589886|gb|ACM93622.1| pyruvate dehydrogenase E1 component, alpha subunit [Nautilia profundicola AmH] Length = 323 Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 135/309 (43%), Positives = 180/309 (58%), Gaps = 5/309 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y LM L R FE A + Y G + GF HL IGQEAV VG + +GD + T YREH Sbjct: 10 YYLMKLGREFELAAKREYMNGNIAGFLHLDIGQEAVSVGTMQAFDKGD-VFTHYREHVLA 68 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G+D +MAEL G++ G+S+GKGGSMH+F FYGG IV + + TG A+A K Sbjct: 69 LARGMDPRAVMAELFGKKTGVSRGKGGSMHLFEPNLDFYGGDAIVAGHLPIATGCAYARK 128 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT-N 234 + + FGDGA+N G +ES NIA+ W L +I+ +ENN YA+GT +S S Sbjct: 129 IQGENAGVFAIFGDGASNAGAFFESINIASAWKLPIIFFLENNFYAIGTHISWVSPFIEQ 188 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 F+K V +P +DGM++ V + +A Y GP IE TYRY GHSMSD Sbjct: 189 FNK--VKNYMPAKVIDGMNVCEVYKAVSEAKEYIENGLGPYFIEAKTYRYEGHSMSDAGK 246 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR+ EE+ E+ + DPIE ++K L A E +E + V +IIN +VEFA++ EPD Sbjct: 247 YRSEEEL-EIYKSKDPIENLKKEALLKGLADENYFQETDAKVERIINEAVEFAKNSPEPD 305 Query: 355 PAELYSDIL 363 ELY + Sbjct: 306 IEELYEGVF 314 >gi|114321743|ref|YP_743426.1| dehydrogenase, E1 component [Alkalilimnicola ehrlichii MLHE-1] gi|114228137|gb|ABI57936.1| dehydrogenase, E1 component [Alkalilimnicola ehrlichii MLHE-1] Length = 669 Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 123/316 (38%), Positives = 186/316 (58%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++ L+ R ML +RRFEE+ +LY + GF H+ IG+EAV G L D ++ Sbjct: 11 LSRTHLLALLRQMLRMRRFEERCVELYTQEKIRGFLHVYIGEEAVGAGAMFGLDPNDGVV 70 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YREHGH L + + +MAE+ G+ G S G+GGSMH+F ++ FYGG+ IVG + L Sbjct: 71 ATYREHGHALLNRIAMNPVMAEMYGKAAGCSLGRGGSMHLFDAEHRFYGGNAIVGGGLPL 130 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A A+K ++ FGDGA +G +ES N+AALW L V +V ENNQYAMGT++ Sbjct: 131 AVGLALADKLAGRQRVTACFFGDGAVAEGVFHESLNLAALWQLPVFFVCENNQYAMGTAL 190 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A AQT ++ + +P +VDGMD+ AV+A +A+A RA +GP +E TYR+R Sbjct: 191 HLAHAQTELYRKAEALGVPAERVDGMDVVAVEAASGRALASVRAGEGPRFLECETYRFRA 250 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSM DP YR + E+ ++ DPI ++ + + EG+L+ ++ + + I+ +V F Sbjct: 251 HSMFDPQLYRDKAEVEAWQAR-DPIRRLSDWMSRSGALHEGELEAMDGEIGEEIDAAVAF 309 Query: 347 AQSDKEPDPAELYSDI 362 A+ + P L + Sbjct: 310 AEQAEWESPDTLLDHV 325 >gi|292492795|ref|YP_003528234.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Nitrosococcus halophilus Nc4] gi|291581390|gb|ADE15847.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Nitrosococcus halophilus Nc4] Length = 342 Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 130/314 (41%), Positives = 187/314 (59%), Gaps = 9/314 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG------DQMITAYR 110 R M+ RRFE++ + Y +GGF HL GQEAV G+ + + + D +IT YR Sbjct: 11 REMVFFRRFEDRTFEAYMERKIGGFLHLYSGQEAVATGV-LEVIQAERGIGFDYVITGYR 69 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 +H H + G A ++MAEL G++ G SKG+GGSMH+F F GG+ +VG L G+ Sbjct: 70 DHIHAIKTGARAREVMAELYGKETGSSKGRGGSMHIFDPSVHFMGGYALVGQPFPLAAGL 129 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A K+++ +I V GDGA NQG +E+ N+AALW L V++V ENN YA+GT++ R++ Sbjct: 130 ALACKHQKEGRIAVCFLGDGANNQGTFHETMNMAALWKLPVLFVCENNLYAIGTAIQRST 189 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + KR ++NIP Q G DI V AV + R+ GP +E+LTYRYRGHSMS Sbjct: 190 PIIDQYKRLAAYNIPASQHYGQDIEVVMEATQSAVDHVRSGAGPYFLELLTYRYRGHSMS 249 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS-VEFAQS 349 D YR++EE+ E DPI+ + +RL+ +E + K +E V+ I+N V+FA+ Sbjct: 250 DAGAYRSKEEVAEW-MQQDPIQILAQRLIEAGELTEEEFKAMEQAVQDEIDNDIVKFAEE 308 Query: 350 DKEPDPAELYSDIL 363 EP EL +L Sbjct: 309 SPEPKVEELTKYVL 322 >gi|308172672|ref|YP_003919377.1| acetoin dehydrogenase E1 component (TPP-dependent subunit alpha) [Bacillus amyloliquefaciens DSM 7] gi|307605536|emb|CBI41907.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus amyloliquefaciens DSM 7] gi|328552440|gb|AEB22932.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus amyloliquefaciens TA208] gi|328910786|gb|AEB62382.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus amyloliquefaciens LL3] Length = 333 Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 128/325 (39%), Positives = 190/325 (58%), Gaps = 5/325 (1%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG ++E E+ L Y+ ML IR FE+K +L+ G++ GF HL G+EAV VG+ L Sbjct: 7 EGLSLTE---EKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHL 63 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +GD + + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GI Sbjct: 64 HDGDSITSTHRGHGHCIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLNKGMLGANGI 123 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VG +L G A KY++++ + V FGDGA NQG +E N+AA+WNL V++V ENN Sbjct: 124 VGGGFTLACGSALTAKYKQTNNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAENNG 183 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 Y T+ ASA + + R ++N+PG++VDG DI AV ++A+ R GP +IE Sbjct: 184 YGEATTFEYASACDSIADRAAAYNMPGVKVDGKDILAVYQAAEEAIERARNGGGPSLIEC 243 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +TYR GH D Y+T++E E D I+ + LL A++ L +IE V + Sbjct: 244 MTYRNYGHFEGDAQTYKTKDERTEHIKEKDAIQGFKNYLLKETDANK--LSDIEQRVSES 301 Query: 340 INNSVEFAQSDKEPDPAELYSDILI 364 I +V F++ P +EL +D+ + Sbjct: 302 IEKAVSFSEDSPYPKESELLTDVYV 326 >gi|289522566|ref|ZP_06439420.1| pyruvate dehydrogenase E1 component, alpha subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504402|gb|EFD25566.1| pyruvate dehydrogenase E1 component, alpha subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 319 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 121/307 (39%), Positives = 179/307 (58%), Gaps = 1/307 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR ML IR FEE+ +L+ G GF HL +G+EAV G +L + D + + +R HGH+ Sbjct: 12 YRNMLTIRYFEERVAELFAAGKCFGFVHLYVGEEAVATGACANLRKDDYITSTHRGHGHL 71 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 ++ G D +MAEL GR+ G KGKGGSMH+ + G G +GIVG + G F K Sbjct: 72 ISKGGDLKLMMAELFGRRTGYCKGKGGSMHIADVELGILGANGIVGGGFPIAVGAGFTAK 131 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y+ +D + FGDG++NQG +E+ N+A++W L VI++ ENN Y + S R+ + Sbjct: 132 YKGTDHVAACFFGDGSSNQGTFHEALNMASIWKLPVIFINENNFYGISLSQRRSMNVPDV 191 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + R ++NIPG+ VDG D+ AV + +AV RA +GP +IE TYRYRGH DP Y Sbjct: 192 AARAAAYNIPGVVVDGNDVLAVYEAVQEAVKRARAGEGPTLIECKTYRYRGHFEGDPTVY 251 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R EE+ E + DPI + ++L +E +K++ + I +V+FA+ P P Sbjct: 252 RPEEEVQEWKKK-DPIPRFEEKLAQMGIMTEEQMKQVREEIASKIEEAVKFAEESPWPSP 310 Query: 356 AELYSDI 362 E+ D+ Sbjct: 311 EEVLEDV 317 >gi|228959011|ref|ZP_04120712.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar pakistani str. T13001] gi|228800672|gb|EEM47588.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar pakistani str. T13001] Length = 332 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 183/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE + YR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMIYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+ Sbjct: 250 YGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ PD EL D+ + Sbjct: 310 EFSENSPYPDDEELLKDVYV 329 >gi|223933524|ref|ZP_03625507.1| Pyruvate dehydrogenase (acetyl-transferring) [Streptococcus suis 89/1591] gi|223897831|gb|EEF64209.1| Pyruvate dehydrogenase (acetyl-transferring) [Streptococcus suis 89/1591] Length = 304 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 121/304 (39%), Positives = 185/304 (60%), Gaps = 2/304 (0%) Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 IR + K +L G V G H +G+EA VG LT+ D + + +R HGH++A G+D Sbjct: 1 IRDVDMKLNKLVRRGFVQGMTHFSVGEEAAAVGPIAGLTDEDIIFSHHRGHGHVIAKGID 60 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 + +MAEL G+ G SKG+GGSMH+ + + G +G +GIVG +L G A +Y +D Sbjct: 61 INGMMAELAGKATGTSKGRGGSMHLANVEKGNFGSNGIVGGGYALAVGAALTQQYLGTDN 120 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 I + GD A N+G +ES N+AA+WNL VI+ I NN+Y + T +S ++ + +R + Sbjct: 121 IVIAFSGDSATNEGSFHESMNLAAVWNLPVIFFITNNRYGISTDISYSTKIPHLYQRAAA 180 Query: 242 FNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREE 300 + IPG V DG D+ AV M + + Y RA GP ++E+ +YR+ GHS +D YRT+EE Sbjct: 181 YGIPGHYVEDGNDVIAVYEKMQEVIEYVRAGNGPAMVEVESYRWFGHSTADAGVYRTKEE 240 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 +NE ++ DP+++ RK L NK A++ +L IE V + + SV+FAQ +PD + Y Sbjct: 241 VNEWKAK-DPLKKYRKYLTENKIATDEELDAIEAQVAEQVEASVKFAQESPDPDISVAYE 299 Query: 361 DILI 364 D+ + Sbjct: 300 DVFV 303 >gi|323356667|ref|YP_004223063.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Microbacterium testaceum StLB037] gi|323273038|dbj|BAJ73183.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Microbacterium testaceum StLB037] Length = 365 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 121/247 (48%), Positives = 156/247 (63%), Gaps = 2/247 (0%) Query: 52 ELSA-YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYR 110 EL A YR MLLIRRFEE+A + Y +GG+CHL +G+EA +VG+ +L GD + YR Sbjct: 22 ELRALYREMLLIRRFEERAARAYSEAKIGGYCHLNLGEEATVVGLMAALEPGDYLYANYR 81 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 EHG+ LA G+ + MAEL GR G+SKG GGSMHMF F GG+GIVG QV L TG Sbjct: 82 EHGYALARGISPERAMAELYGRTDGVSKGWGGSMHMFDLDARFMGGYGIVGGQVPLATGT 141 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A YR D + + GDG N G +ES NIAALWNL ++YV+ NN MGT+V ++S Sbjct: 142 ALAIHYRGEDDVVMCLMGDGTTNIGAFHESLNIAALWNLPIVYVVNNNGLGMGTTVEQSS 201 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A+ +R S+ +P +VDG D AV+ A RA P ++E +T R +GHS+ Sbjct: 202 AEPELHRRASSYRMPSARVDGFDPGAVREAARIARDSARAGT-PYLLETMTGRMKGHSVV 260 Query: 291 DPANYRT 297 DPA YRT Sbjct: 261 DPARYRT 267 >gi|194015832|ref|ZP_03054447.1| pyruvate dehydrogenase E1 component subunit alpha [Bacillus pumilus ATCC 7061] gi|194012187|gb|EDW21754.1| pyruvate dehydrogenase E1 component subunit alpha [Bacillus pumilus ATCC 7061] Length = 324 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 122/318 (38%), Positives = 181/318 (56%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KE+ + Y+ M IR+FE++ L+ G++ GF HL G+EAV VG+ L E D + Sbjct: 5 LTKEKAVWMYQKMQEIRQFEDQVHMLFTKGILPGFVHLYAGEEAVAVGVCAHLNEQDSIT 64 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 65 STHRGHGHCIAKGCDLKGMMAEIYGKATGLCKGKGGSMHIADFDKGMLGANGIVGGGFPL 124 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+ +D + V FGDGA NQG +E N+AA+W L VI++ ENN Y T Sbjct: 125 ACGAALTAKYKNTDNVSVCFFGDGANNQGTFHEGINLAAIWKLPVIFIAENNGYGEATPF 184 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S AS+ + R S+ IPG+QVDG D+ AV ++A+ + +GP +IE +TYR G Sbjct: 185 SYASSCKSIVDRAASYGIPGIQVDGKDVTAVYQAAEQAIERAKNGEGPTLIECMTYRNYG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D Y+T +E E + D I + LL + ++ ++ IE V + I+ +V F Sbjct: 245 HFEGDAQRYKTNQEKTEHQEEKDAITLFKNELLKQQLLTDQEISSIEATVAEAIDQAVRF 304 Query: 347 AQSDKEPDPAELYSDILI 364 ++ + PD EL +D+ + Sbjct: 305 SEESEYPDHTELLTDVYV 322 >gi|116669076|ref|YP_830009.1| pyruvate dehydrogenase (acetyl-transferring) [Arthrobacter sp. FB24] gi|116609185|gb|ABK01909.1| Pyruvate dehydrogenase (acetyl-transferring) [Arthrobacter sp. FB24] Length = 333 Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 122/301 (40%), Positives = 177/301 (58%), Gaps = 2/301 (0%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R ML +RR EE+ +LY + GF H+ IG+EAV G+ +L D ++ YREHGH L Sbjct: 22 RQMLRVRRLEEQCVELYSAAKIRGFLHVYIGEEAVAAGVMSTLAPDDAVVATYREHGHAL 81 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 GV A I+AE+ G G +G+GGSMH+F FYGG+ IV + L G+A A+K Sbjct: 82 LRGVPAGAILAEMYGHVEGCCRGRGGSMHLFDAGTRFYGGNAIVAGGLPLAVGLALADKM 141 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 ++ V FG+GA +G +ES N+AALW L V++ ENN YAMGT+++R+ +QT+ + Sbjct: 142 SGRSRVTVCFFGEGAVAEGAFHESLNLAALWQLPVLFCCENNLYAMGTALARSESQTDIA 201 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 + + I DGMD+ AV+ +AV RA GP +E+ TYR+R HSM DP YR Sbjct: 202 LKAAGYEIASWSADGMDVIAVEEAARRAVDAVRAGGGPHFLELRTYRFRAHSMFDPERYR 261 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 + E++ DPI+ +R L S D K I+ +V ++ +VEFA++ P+P Sbjct: 262 DKAEVSRW-MERDPIDTLRTALEAAGQLSAKDWKSIQQDVDTEVDAAVEFAEAGT-PEPL 319 Query: 357 E 357 E Sbjct: 320 E 320 >gi|262038070|ref|ZP_06011475.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Leptotrichia goodfellowii F0264] gi|261747890|gb|EEY35324.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Leptotrichia goodfellowii F0264] Length = 321 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 123/318 (38%), Positives = 191/318 (60%), Gaps = 2/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +K + L+ Y LML IR F+ K QL GMV G HL +G+EA +G +L D + Sbjct: 2 ELSKNRLLNMYELMLDIRNFDLKVNQLVKRGMVPGMTHLSVGEEAANIGALSALNPDDII 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG ++ G+D + +MAE+ G+ G KGKGGSMH+ +NG G +GIVG Sbjct: 62 TSNHRGHGQVIGKGIDLNGMMAEIMGKATGTCKGKGGSMHIADLENGNLGANGIVGGGQG 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A+ K +++ KI V FGDGA N+G +E+ N+A++W + VI+ NN Y + TS Sbjct: 122 IAVGAAYTQKVKKTGKIVVCFFGDGATNEGSFHETLNLASVWKVPVIFYSINNGYGISTS 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + + +R ++ IPG + DG D+ V ++AV Y R GP++IE +TYR+ Sbjct: 182 IKKVMNTEHIYERAAAYGIPGYFIEDGNDVLEVYKKFEEAVKYVREGNGPVLIESVTYRW 241 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS SDP YRT+EE++E + DPI + K L+ NK A++ +L +++ ++ I ++V Sbjct: 242 FGHSSSDPGKYRTKEEVDEWKKK-DPILKFGKYLVENKIATQEELDKLDEISKQKIEDAV 300 Query: 345 EFAQSDKEPDPAELYSDI 362 EFA++ EP + DI Sbjct: 301 EFAKNSPEPTIESAFEDI 318 >gi|221506329|gb|EEE31964.1| pyruvate dehydrogenase, putative [Toxoplasma gondii VEG] Length = 635 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 119/306 (38%), Positives = 181/306 (59%), Gaps = 11/306 (3%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 ML R E+ +LY MG GF HL GQEAV G+ L D +++ YR+H H + Sbjct: 265 MLTGRMVEDACARLYYMGKTAGFVHLYTGQEAVSAGVIKLLRPDDAVVSTYRDHVHATSK 324 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GV ++MAEL G+ G S+G+GGSMHMFS K+ GG +G Q+ + G AF+ YRR Sbjct: 325 GVPVREVMAELFGKATGCSRGRGGSMHMFSKKHNMIGGFAFIGEQIPVALGYAFSAAYRR 384 Query: 179 ----------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 +D++ V GDG N GQ+YE+ NIAAL L +++V+ENN +A+G + R Sbjct: 385 FAMGDKSDSNADQVAVCFLGDGTTNMGQLYEALNIAALSKLPIVFVVENNNWAIGMAAQR 444 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++A +R SF + G++VDGMD+ AV+ +A+ + R +GP +IE LTYR+RGHS Sbjct: 445 STATPAVWQRAESFGVAGVEVDGMDVLAVRGAARRAIDHARRGEGPTLIEALTYRFRGHS 504 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++DP R ++ E DPI+ + L +AS+ + V+ +++++V+FA+ Sbjct: 505 VADPDEMRAVKQ-KEAWVVRDPIKSFEEELKRLGYASDETIAATRAKVKAVVDDAVKFAE 563 Query: 349 SDKEPD 354 + EPD Sbjct: 564 TSPEPD 569 >gi|183983472|ref|YP_001851763.1| pyruvate dehydrogenase E1 component (alpha subunit) [Mycobacterium marinum M] gi|183176798|gb|ACC41908.1| pyruvate dehydrogenase E1 component (alpha subunit) [Mycobacterium marinum M] Length = 334 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 121/305 (39%), Positives = 182/305 (59%), Gaps = 1/305 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ +RR EEK +LY + GF HL +G+EAV G L E D ++ YREH H L Sbjct: 13 MVRVRRMEEKCAELYSAAKIRGFLHLYVGEEAVAAGSLRVLAEDDAVVATYREHAHALLR 72 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ + IMAE+ G+Q G S+G+GGSMH+F FYGG+ IV + L GI+ A+ + Sbjct: 73 GIPMTSIMAEMFGKQEGCSRGRGGSMHLFDQARRFYGGNAIVAGGLPLAVGISLADSMLK 132 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 +++ FGDGA +G +ES N+AALW L V+++ ENN YAMGT++ RA +QT+ + + Sbjct: 133 RNRVTACYFGDGAVAEGAFHESLNMAALWKLPVLFLCENNLYAMGTALHRAQSQTDLTVK 192 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 S+N+ + VDGMD+ A + + V + R+ GP IE TYR+R HSM DP YR + Sbjct: 193 AASYNVATLAVDGMDVAACMSATQQGVDHIRSTGGPFFIEFRTYRFRAHSMFDPELYRDK 252 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 E+ R DPI ++ L++ ++ D+++IE + I +V FA + D ++L Sbjct: 253 AEVQRWR-ERDPIRLFTEQCLNSGTLTDDDVRDIEGSAADEIAAAVAFADAGTWEDASDL 311 Query: 359 YSDIL 363 D+L Sbjct: 312 ERDVL 316 >gi|323703752|ref|ZP_08115391.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Desulfotomaculum nigrificans DSM 574] gi|323531276|gb|EGB21176.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Desulfotomaculum nigrificans DSM 574] Length = 319 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 133/317 (41%), Positives = 187/317 (58%), Gaps = 1/317 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E N+ L YR ML IR FEE A L+ G + GF HL G+EAV VG+ L GD + Sbjct: 2 ELNENALLKMYRTMLTIREFEETASTLFANGEIPGFVHLYSGEEAVAVGIISQLEPGDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH+++ G D + AEL G++ G KGKGGSMH+ GF G +GIVGA + Sbjct: 62 ASTHRGHGHMISRGGDIKLMFAELFGKKTGYCKGKGGSMHIADVSLGFLGANGIVGAGLP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G AFA KY+++ + V FGDGA+N+G ++ES NIA++W L I+V ENN Y + + Sbjct: 122 LAAGAAFACKYKKNGGVAVCFFGDGASNRGTLHESLNIASIWKLPAIFVCENNMYGISMN 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + R ++ IPG+ VDG ++ AV +A+ R +GP +IE TYRYR Sbjct: 182 QKNHQNINDIADRASAYGIPGVSVDGNNVMAVFEAGQEAIKRARNGEGPTLIECKTYRYR 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR EE+ + DPIEQ +KRL+ +E + I VR +I VE Sbjct: 242 GHFEGDPTVYRPDEEVQYWKQ-RDPIEQFKKRLVEMNVLTEEQDQAIRSEVRNLIREGVE 300 Query: 346 FAQSDKEPDPAELYSDI 362 FA++ + PD +EL +D+ Sbjct: 301 FARNSEYPDVSELLTDV 317 >gi|33866154|ref|NP_897713.1| pyruvate dehydrogenase E1 alpha subunit [Synechococcus sp. WH 8102] gi|33639129|emb|CAE08135.1| Pyruvate dehydrogenase E1 alpha subunit [Synechococcus sp. WH 8102] Length = 361 Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 124/319 (38%), Positives = 192/319 (60%), Gaps = 9/319 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMI 106 ++E L +R M L RRFE+K ++Y G + GF HL GQEAV G+ ++ + D Sbjct: 36 DRETGLELFRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIGAMKRQHDWFC 95 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG + + + Sbjct: 96 STYRDHVHALSAGVPAREVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGFAFIAEGIPV 155 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G AF ++Y+R S+ + FGDG N GQ +E N+A LW L +++V+ENN+ Sbjct: 156 ALGSAFTSRYKRDALGDASSNAVTAAFFGDGTCNNGQFFECMNMAQLWKLPILFVVENNK 215 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA++ ++ SF + G +VDGMD+ AV+A +AV RA +GP ++E Sbjct: 216 WAIGMAHDRATSDPEIWRKAASFGMAGEEVDGMDVLAVRAAAQRAVERARAGEGPTLLEC 275 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R +E + + DP++ + + L S +L+ IE + I Sbjct: 276 LTYRFRGHSLADPDELRAEQE-KQFWAQRDPLKALERDLCEANLVSSDELRSIEKEIDAI 334 Query: 340 INNSVEFAQSDKEPDPAEL 358 + + VEFA S EPDP EL Sbjct: 335 VQDCVEFALSAPEPDPTEL 353 >gi|229070255|ref|ZP_04203506.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus F65185] gi|228712873|gb|EEL64797.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus F65185] Length = 332 Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 182/320 (56%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT D Sbjct: 10 NEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTHSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 190 TFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+ EE E + D I RK L+H +E +L ++E V + S+ Sbjct: 250 YGHFEGEAQTYKISEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF+++ PD EL D+ + Sbjct: 310 EFSENSPYPDDEELLKDVYV 329 >gi|13473131|ref|NP_104698.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Mesorhizobium loti MAFF303099] gi|14023879|dbj|BAB50484.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Mesorhizobium loti MAFF303099] Length = 342 Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 127/324 (39%), Positives = 188/324 (58%), Gaps = 4/324 (1%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 ++PF+ +++ EQ M LIRRFEE A + Y G++ G HL IGQEA + Sbjct: 13 ANLPFV----YRQYSAEQLREVLYKMYLIRRFEEGAEESYMRGLIHGTMHLSIGQEASAM 68 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G+ M L E DQ+ + +R HGH +A G + ++ AE G+ G KG+GGSMH+ G Sbjct: 69 GICMPLGEDDQITSTHRGHGHCIAKGAEVKRMFAEFFGKTTGYCKGRGGSMHIADVAKGN 128 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 G +GIVG + + G A ++K ++ K+ V FGDGA N+G +E+ N+AA+W L VI+ Sbjct: 129 LGANGIVGGGIPIAVGAALSSKMMKTGKVVVSFFGDGANNEGAFHEALNMAAVWKLPVIF 188 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 V ENN Y M TS +R++A N + R ++++PG+ V+G V +AV RA +G Sbjct: 189 VCENNGYGMSTSTARSTAVKNIADRAAAYSMPGVIVNGNIFSEVAEASYRAVERARAGEG 248 Query: 274 PIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 P +IE TYR+RGHS SD YRT+EEI + SN DPI L + + ++ I Sbjct: 249 PTLIESKTYRHRGHSKSDRNRYRTKEEIEDWMSNRDPITLFENELREFGFIDDKGIEAIR 308 Query: 334 MNVRKIINNSVEFAQSDKEPDPAE 357 V + I + +EFA++ PD +E Sbjct: 309 SAVSQEIADGIEFAKASPSPDVSE 332 >gi|332361203|gb|EGJ39007.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1056] Length = 322 Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 126/320 (39%), Positives = 189/320 (59%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYKGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK LL NK ASE +L+ I+ V+K + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLLENKIASEEELEAIQTGVKKAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|198284756|ref|YP_002221077.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665447|ref|YP_002427437.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|1750278|gb|AAB41626.1| pyruvate dehydrogenase complex E1 alpha subunit [Acidithiobacillus ferrooxidans] gi|198249277|gb|ACH84870.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517660|gb|ACK78246.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 327 Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 126/299 (42%), Positives = 175/299 (58%), Gaps = 3/299 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG-MKMSLTEGDQMITAYREHGHI 115 R ML RRFEE+ + Y +GGF HL G+EA +G ++ + T D ++T YR+H H Sbjct: 11 REMLFARRFEERCAEAYHERQIGGFLHLYPGEEACAIGVLEKARTGSDYVVTGYRDHIHA 70 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G+D +MAEL G++ G SKG+GGSMH+F F GG+ +VG L G A A + Sbjct: 71 LKSGMDPKALMAELFGKETGCSKGRGGSMHLFDPDVHFMGGYALVGGPFPLAAGFAKAIQ 130 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R SD+I + GDGA NQG +E+ N+A+LWNL V++V ENN Y +GT++ R++ + N Sbjct: 131 LRGSDEISICFLGDGANNQGTFHETMNMASLWNLPVLFVCENNLYGIGTAIERSTVEINQ 190 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 KR + I Q DG DI V +KAV Y R + P +E++TYR RGHSMSD Y Sbjct: 191 YKRVAPYRIEAAQCDGQDIDVVMDHAEKAVQYVREKRKPYFLELMTYRLRGHSMSDSGAY 250 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS-VEFAQSDKEP 353 R++EE+ E + DPI + RLL SE + ++ + I N V FA EP Sbjct: 251 RSKEEVEEW-AQRDPIGIYKHRLLEAGVVSEDEFHAMDKAILDEIENEIVRFAAESPEP 308 >gi|223934393|ref|ZP_03626314.1| Pyruvate dehydrogenase (acetyl-transferring) [bacterium Ellin514] gi|223896856|gb|EEF63296.1| Pyruvate dehydrogenase (acetyl-transferring) [bacterium Ellin514] Length = 358 Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 135/329 (41%), Positives = 200/329 (60%), Gaps = 8/329 (2%) Query: 42 FEVSEFNKE----QELSAYRLMLLIRRFEEKAGQLYGMGM-VGGFCHLCIGQEAVIVGMK 96 F +E N++ Q++ R ML IRRFE+ A + Y G +GGF HL IGQE+V VG Sbjct: 10 FADAEVNRKLKPAQKIDLLREMLRIRRFEQTALKYYQTGGDMGGFLHLYIGQESVAVGTI 69 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 + D +ITAYR HGH LA G+ ++ MAEL G+ G SKGKGGSMH F+ ++GG Sbjct: 70 SLCGDNDHVITAYRNHGHALAVGMSMNECMAELFGKATGCSKGKGGSMHFFAPDKNYWGG 129 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 HGIVG Q LG G+A+A K++ C+ GDGA NQG +ES N+AALW+L VIY+IE Sbjct: 130 HGIVGGQTPLGLGLAYAVKFKGLKGSCLCYLGDGAVNQGAYHESLNLAALWSLPVIYIIE 189 Query: 217 NNQYAMGTSVSRASAQTN-FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 NNQY+MGTS+ R+S+ + + R +++ +++G DI ++A KA+ P Sbjct: 190 NNQYSMGTSLGRSSSFKDCLAARAEGYDMEWDRINGEDIYEIRAKTWKAIERAHNESRPT 249 Query: 276 IIEMLTYRYRGHSMSD--PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 ++E+ TYRY GHS++D YR EI + HDP+ +KRL+ + + D ++I+ Sbjct: 250 VLEIDTYRYYGHSVADANAKKYRDPAEIERYQKMHDPVRLFQKRLIEDGILTIEDAEKID 309 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + + + +FAQ P+ +++SD+ Sbjct: 310 AEAKAEASAAAQFAQESPLPNVQDIFSDV 338 >gi|260461617|ref|ZP_05809864.1| Pyruvate dehydrogenase (acetyl-transferring) [Mesorhizobium opportunistum WSM2075] gi|259032687|gb|EEW33951.1| Pyruvate dehydrogenase (acetyl-transferring) [Mesorhizobium opportunistum WSM2075] Length = 342 Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 127/324 (39%), Positives = 188/324 (58%), Gaps = 4/324 (1%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 ++PF+ +++ EQ M LIRRFEE A + Y G++ G HL IGQEA + Sbjct: 13 ANLPFV----YRQYSAEQLKQVLYKMYLIRRFEEGAEECYTRGLIHGTMHLSIGQEASAM 68 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G+ M L E DQ+ + +R HGH +A G + ++ AE G+ G KG+GGSMH+ G Sbjct: 69 GICMPLGEDDQITSTHRGHGHCIAKGAEVKRMFAEFFGKTTGYCKGRGGSMHIADVGKGN 128 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 G +GIVG + + G A ++K ++ K+ V FGDGA N+G +E+ N+AA+W L VI+ Sbjct: 129 LGANGIVGGGIPIAVGAALSSKRMKTGKVVVSFFGDGANNEGAFHEALNMAAIWKLPVIF 188 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 V ENN Y M TS +R++A N + R ++++PG+ V+G V KA+ RA +G Sbjct: 189 VCENNGYGMSTSTARSTAVKNIADRAAAYSMPGVIVNGNIFSEVAEASYKAIERARAGEG 248 Query: 274 PIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 P +IE TYR+RGHS SD YRT+EEI + SN DPI L + + ++ I Sbjct: 249 PTLIESKTYRHRGHSKSDRNRYRTKEEIEDWMSNRDPITLFENELREFGFIDDKGIEAIR 308 Query: 334 MNVRKIINNSVEFAQSDKEPDPAE 357 V + I + +EFA++ PD +E Sbjct: 309 DAVAREIADGIEFAKASPSPDISE 332 >gi|148530034|gb|ABQ82224.1| pyruvate dehydrogenase E1 component alpha [Gluconacetobacter diazotrophicus PAl 5] Length = 223 Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 113/223 (50%), Positives = 154/223 (69%), Gaps = 2/223 (0%) Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS++ FYGGHGIVGAQV LG G+ F NKYR +D++ + FG+GA +QGQVYESFN Sbjct: 1 SMHMFSSEKHFYGGHGIVGAQVLLGIGLGFDNKYRGTDEVSIAYFGEGAFSQGQVYESFN 60 Query: 203 IAALWNLNVIYVIENNQY-AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 +AAL L ++V+E +R + G + +PG VDGMD+ AV+ Sbjct: 61 LAALHKLPCVFVLEQQPLRPWHQRRARRRRPRTLWRHGQPWGLPGRPVDGMDVEAVRDAA 120 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHN 321 +A+ +CR KGP ++EM TYRYRGHSMSDPA YR R E++EMR NHDPI++VRK LL Sbjct: 121 REAIEHCRQGKGPYLLEMTTYRYRGHSMSDPAKYRPRSEVDEMRKNHDPIDRVRKELLAM 180 Query: 322 KWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 E +LK IE V++++ ++ +FAQ+ EPDPAEL++D+L+ Sbjct: 181 G-VGEAELKTIEDKVKEVVVDAADFAQTSPEPDPAELWTDVLV 222 >gi|324992902|gb|EGC24822.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK405] gi|324994461|gb|EGC26374.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK678] gi|327462208|gb|EGF08535.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1] gi|327474228|gb|EGF19635.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK408] gi|327489695|gb|EGF21486.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1058] Length = 322 Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 126/320 (39%), Positives = 189/320 (59%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV Y R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVDYVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK LL NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLLENKIASEEELEAIQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|186471763|ref|YP_001863081.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Burkholderia phymatum STM815] gi|184198072|gb|ACC76035.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Burkholderia phymatum STM815] Length = 339 Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 119/316 (37%), Positives = 178/316 (56%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + K+ L R ML +RR EEK +LYG GM+ GF HL IG+EA VG +L D ++ Sbjct: 17 YEKDFSLRLLRDMLRVRRLEEKCAELYGAGMIRGFLHLYIGEEATAVGALHALASDDNIV 76 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YREH H L G+D +MAE+ G+ G + G+GGSMH+F +GG+ IVG + L Sbjct: 77 ATYREHAHALVRGMDMGVLMAEMYGKYEGCAHGRGGSMHLFDRTRRLFGGNAIVGGSLPL 136 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A A K + S I FGDGA +G +ES N+AALW L +++ ENN YAMGT++ Sbjct: 137 AVGLALAQKMQGSQGITACFFGDGAVAEGAFHESMNLAALWKLPILFCCENNLYAMGTAI 196 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+ +QT+ + ++N+P DGMD+ +V +AVA R + P+ +E TYR+R Sbjct: 197 ERSQSQTDLCAKAAAYNVPARSADGMDVVSVHDATSEAVACVRTAQNPLFLEFRTYRFRA 256 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSM D YR + E+ + ++ PI RL SE + ++ + ++V F Sbjct: 257 HSMYDAELYRQKAEVEQWKTR-GPIHTFTARLKDEGKLSEDEFLALDAAALAEVEHAVAF 315 Query: 347 AQSDKEPDPAELYSDI 362 A++ +L +D+ Sbjct: 316 AEAGTWERAEDLLTDL 331 >gi|325687459|gb|EGD29480.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK72] Length = 322 Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 126/320 (39%), Positives = 189/320 (59%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKAGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV Y R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVDYVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK LL NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLLENKIASEEELEAIQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|300709831|ref|YP_003735645.1| dehydrogenase E1 component [Halalkalicoccus jeotgali B3] gi|299123514|gb|ADJ13853.1| dehydrogenase E1 component [Halalkalicoccus jeotgali B3] Length = 347 Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 124/309 (40%), Positives = 177/309 (57%), Gaps = 1/309 (0%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 A R ML IR+F+ AG+ + G + GF HL IG+EAV VG +L + D + + +R HGH Sbjct: 15 ALRRMLTIRQFDTTAGERFADGEIPGFVHLYIGEEAVGVGACAALEDDDYITSTHRGHGH 74 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +A G+D +MAEL G++ G GKGGSMH+ G G +GIVGA LGTG A Sbjct: 75 CIAKGLDPKPMMAELYGKREGYCNGKGGSMHIADVDAGMLGANGIVGAGPPLGTGAALTI 134 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + D++ + GDGA QGQV+ + N+AA W+L VI+++ENN Y GT N Sbjct: 135 DRKDEDRVALSFLGDGAVAQGQVHSAANLAATWDLPVIFLVENNGYGEGTPAEMQHNVEN 194 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S ++N+PG+ VDGMDI AV + +A RA GP IE TYR+ GH D Sbjct: 195 LSATAGAYNVPGITVDGMDITAVNEAVTEARERARAGDGPTFIEAETYRFHGHFEGDEEL 254 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR +E+ ++ DPIE +RL+ ++ + + ++ V I ++E+AQS +EP Sbjct: 255 YREDDEVERWQAR-DPIETFAQRLIDRDELTDEEYEALQSEVETTIEEALEYAQSAEEPA 313 Query: 355 PAELYSDIL 363 P E Y D+ Sbjct: 314 PEEAYDDMF 322 >gi|157691244|ref|YP_001485706.1| dihydrolipoyl dehydrogenase E1 alpha subunit [Bacillus pumilus SAFR-032] gi|157680002|gb|ABV61146.1| dihydrolipoyl dehydrogenase E1 alpha subunit [Bacillus pumilus SAFR-032] Length = 325 Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 121/318 (38%), Positives = 181/318 (56%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KE+ + Y+ M IR+FE++ L+ G++ GF HL G+EAV VG+ L E D + Sbjct: 5 LTKEKAVWMYQKMQEIRQFEDQVHTLFTKGILPGFVHLYAGEEAVAVGVCAHLNEQDSIT 64 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 65 STHRGHGHCIAKGCDLKGMMAEIYGKATGLCKGKGGSMHIADFDKGMLGANGIVGGGFPL 124 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY++++ + V FGDGA NQG +E N+AA+W L VI++ ENN Y T Sbjct: 125 ACGAALTAKYKKTNNVSVCFFGDGANNQGTFHEGINLAAIWKLPVIFIAENNGYGEATPF 184 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S AS+ + R ++IPG+QVDG D+ AV ++A+ + +GP +IE +TYR G Sbjct: 185 SYASSCKSIVDRAAGYDIPGIQVDGKDVMAVYQAAEQAIERAKNGEGPTLIECMTYRNYG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D Y+T +E E + D I + L+ + + G+L IE V I+ +V F Sbjct: 245 HFEGDAQRYKTNQEKTEHQEERDAIALFKNELIKQQLLTNGELSNIEAAVADAIDEAVRF 304 Query: 347 AQSDKEPDPAELYSDILI 364 ++ + PD EL +D+ + Sbjct: 305 SEESEYPDHTELLTDVYV 322 >gi|472326|gb|AAA21744.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Clostridium magnum] Length = 326 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 126/316 (39%), Positives = 186/316 (58%), Gaps = 9/316 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + Y+ ML IR+FEE A G + GF HL IG+EAV G+ +L + D + + +R H Sbjct: 9 IDMYKTMLKIRKFEEVAMNASAEGRIPGFIHLYIGEEAVATGVCANLNDKDYITSTHRGH 68 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GHI+A G D +MAEL G+ G KG+GGSMH+ G G +GIVGA L G Sbjct: 69 GHIVAKGGDLKLMMAELFGKATGYCKGRGGSMHIADATKGILGANGIVGAGHDLALGAGL 128 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 + +YR ++++C+ FGD + NQG +E+ N+A++W L +++V ENN Y + TS R A Sbjct: 129 SAQYRGTNEVCICFFGDASTNQGTFHEALNMASVWKLPIVFVCENNGYGISTSQKRHMAI 188 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + + RGV +N+PG+ VDG D+ AV +A+ R KGP ++E TYR+RGH DP Sbjct: 189 KDVADRGVGYNVPGVVVDGNDVFAVYEAAGEAIKRAREGKGPTLLECKTYRHRGHFEGDP 248 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 Y+ +EE +M DPI + K +L+N+ SE +KE++ ++ I +V FA D Sbjct: 249 MTYKPKEE-QDMWLKKDPIPRFEKHILNNEVLSEEGIKEVQDDIENQIKEAVAFA--DNS 305 Query: 353 PDP------AELYSDI 362 P P ++YSDI Sbjct: 306 PIPNVETALEDVYSDI 321 >gi|325689706|gb|EGD31710.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK115] gi|332360450|gb|EGJ38261.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK355] Length = 322 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 125/320 (39%), Positives = 190/320 (59%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K+ L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKDLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK LL NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLLENKIASEEELEAIQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|239835097|ref|ZP_04683424.1| pyruvate dehydrogenase (acetyl-transferring) [Ochrobactrum intermedium LMG 3301] gi|239821236|gb|EEQ92806.1| pyruvate dehydrogenase (acetyl-transferring) [Ochrobactrum intermedium LMG 3301] Length = 345 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 121/316 (38%), Positives = 183/316 (57%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++ +Q A M LIRRFEE A + Y G++ G HL IGQEA +G + L + D + Sbjct: 25 YSPDQLKEALHKMYLIRRFEEGAEESYTRGLIHGTMHLSIGQEASAMGSCLPLNDDDMIT 84 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D ++ AE G++ G KG+GGSMH+ G G +GIVG + + Sbjct: 85 STHRGHGHCIAKGADVKRMFAEFFGKETGYCKGRGGSMHIADVSKGNLGANGIVGGGIPI 144 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A + K +++ K+ V FGDGA N+G +E+ N+A++W L V++V ENN Y M TS Sbjct: 145 AVGAALSAKKQKNGKVVVSFFGDGANNEGAFHEALNMASVWKLPVVFVCENNGYGMSTST 204 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R++A N + R ++N+PG+ VDG ++ V + +A R GP +IE TYR RG Sbjct: 205 RRSTAVANVADRASAYNMPGVIVDGNNLSEVAEAVSEATERARRGDGPTLIENKTYRIRG 264 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS SD YRT+EEI +++ DPI L + ++ +++ I V K I ++EF Sbjct: 265 HSKSDRNRYRTKEEIEHWQNDRDPIAHFEADLKAYGFINDAEIEAIRAEVEKEIAEAIEF 324 Query: 347 AQSDKEPDPAELYSDI 362 A++ PD L D+ Sbjct: 325 AKNSPAPDLTNLTRDV 340 >gi|260435056|ref|ZP_05789026.1| pyruvate dehydrogenase E1 component, alpha subunit [Synechococcus sp. WH 8109] gi|260412930|gb|EEX06226.1| pyruvate dehydrogenase E1 component, alpha subunit [Synechococcus sp. WH 8109] Length = 363 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 125/319 (39%), Positives = 194/319 (60%), Gaps = 9/319 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMI 106 +++ L YR M L RRFE+K ++Y G + GF HL GQEAV G+ ++ + D Sbjct: 38 DRDTGLELYRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIGAMKRQHDWFC 97 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG + + + Sbjct: 98 STYRDHVHALSAGVPAREVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGFAFIAEGIPV 157 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G AF ++Y+R S+ + FGDG N GQ +E N+A LW L +I+V+ENN+ Sbjct: 158 ALGSAFTSRYKRDALGDASSNAVTAAFFGDGTCNNGQFFECMNMAQLWKLPIIFVVENNK 217 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA++ ++ SF + G +VDGMD+ AV+A +AV RA +GP ++E Sbjct: 218 WAIGMAHDRATSDPEIWRKASSFGMAGEEVDGMDVLAVRAAAQRAVERARAGEGPTLLEC 277 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R EE + + DP++ + + L + +L+ IE ++ I Sbjct: 278 LTYRFRGHSLADPDELRAEEE-KQFWAKRDPLKALERDLTEAGLVNSEELRAIEKDIDGI 336 Query: 340 INNSVEFAQSDKEPDPAEL 358 + + V+FA S EPDPAEL Sbjct: 337 VQDCVDFALSAPEPDPAEL 355 >gi|322387861|ref|ZP_08061469.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus infantis ATCC 700779] gi|321141363|gb|EFX36860.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus infantis ATCC 700779] Length = 322 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 127/320 (39%), Positives = 188/320 (58%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + S KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMKNSGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVKHIHERSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE++E + DPIE +RK L+ NK AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVDEWKEK-DPIENLRKYLVENKIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|15613339|ref|NP_241642.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Bacillus halodurans C-125] gi|10173390|dbj|BAB04495.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Bacillus halodurans C-125] Length = 326 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 127/318 (39%), Positives = 190/318 (59%), Gaps = 1/318 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +++ + ++ M LIR FEEK + + GM+ G HL +GQEA VG L E D+ Sbjct: 8 AQMTEKKLVDLFKQMWLIRYFEEKVDEFFAKGMIHGTTHLAVGQEASAVGSIAVLEERDK 67 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D +++MAEL GR+ G KGKGGSMH+ + G G +GIVG Sbjct: 68 LTSTHRGHGHCIAKGADVNRMMAELFGRETGYCKGKGGSMHIADVERGNLGANGIVGGGF 127 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 S+ TG A +K ++ + + FGDGA+N+G +E+ N+A++W L V+++ ENNQY M Sbjct: 128 SIATGAALTSKMKKEGYVVLCFFGDGASNEGSFHEAVNLASIWKLPVVFICENNQYGMSG 187 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV + S R + IPGM VDG D+ AV + +AV R +GP I+E TYR+ Sbjct: 188 SVKEMINIEHISDRAAGYGIPGMVVDGNDVFAVMNVVGRAVDRARRGEGPTIVEAKTYRW 247 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +GHS SD YRTREE E R DPI ++R L+ +E + I+ ++ I +SV Sbjct: 248 KGHSKSDAKKYRTREEEKEWREK-DPIARLRATLVKEGIVTEEEADSIQEEAKQKIEDSV 306 Query: 345 EFAQSDKEPDPAELYSDI 362 +FA++ EP+ L D+ Sbjct: 307 QFARNSPEPEIESLLEDV 324 >gi|167567524|ref|ZP_02360440.1| dehydrogenase E1 component [Burkholderia oklahomensis EO147] gi|167569699|ref|ZP_02362573.1| dehydrogenase E1 component [Burkholderia oklahomensis C6786] Length = 327 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 125/320 (39%), Positives = 187/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L++ D Sbjct: 5 NQLGRDRLLEAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGAMLHLSDVDY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ GR+ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRSMMAEIYGRKTGVCHGKGGSMHIADLSKGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K R + + V FGDGA+NQG V+ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKLRETGGVGVCFFGDGASNQGVVFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 185 ASSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARGGGGPTLVEVKFSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D +++ +R++ + + DL+ I+ V K+I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKRFEERVVRAEALTREDLRAIDAAVAKLIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AEAKAAPLPDAADLLTDVYV 324 >gi|332360886|gb|EGJ38692.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK49] Length = 322 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 124/320 (38%), Positives = 190/320 (59%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K+ L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKDLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK LL NK ASE +L+ ++ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLLENKIASEEELEAVQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|327460355|gb|EGF06692.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1057] Length = 322 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 124/320 (38%), Positives = 190/320 (59%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE++E + DPIE +RK LL NK ASE +L+ ++ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVDEWKKK-DPIENLRKYLLENKIASEEELEAVQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|296331899|ref|ZP_06874364.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673511|ref|YP_003865183.1| acetoin dehydrogenase E1 component TPP-dependent alpha subunit [Bacillus subtilis subsp. spizizenii str. W23] gi|296150977|gb|EFG91861.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411755|gb|ADM36874.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. spizizenii str. W23] Length = 333 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 128/325 (39%), Positives = 186/325 (57%), Gaps = 5/325 (1%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG ++E E+ L Y+ ML IR FE+K +L+ G++ GF HL G+EAV VG+ L Sbjct: 7 EGLSLTE---EKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHL 63 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +GD + + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GI Sbjct: 64 HDGDSITSTHRGHGHCIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLDKGMLGANGI 123 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VG +L G A KY+++ + V FGDGA NQG +E N+AA+WNL V++V ENN Sbjct: 124 VGGGFTLACGSALTAKYKQTKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAENNG 183 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 Y T ASA + + R ++N+PG+ VDG DI AV ++A+ R GP +IE Sbjct: 184 YGEATPFEYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAIERARNGGGPSLIEC 243 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +TYR GH D Y+T++E E D I+ + LL A+ L +IE V K Sbjct: 244 MTYRNYGHFEGDAQTYKTKDERAEHLEEKDAIQGFKNYLLKETDANR--LSDIEQRVSKS 301 Query: 340 INNSVEFAQSDKEPDPAELYSDILI 364 I +V F++ P ++L +D+ + Sbjct: 302 IEKAVSFSEDSPYPKESDLLTDVYV 326 >gi|324991154|gb|EGC23088.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK353] gi|325694503|gb|EGD36412.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK150] Length = 322 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 125/320 (39%), Positives = 189/320 (59%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK LL NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLLENKIASEEELEAIQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|125718000|ref|YP_001035133.1| acetoin dehydrogenase, E1 component, alpha subunit [Streptococcus sanguinis SK36] gi|125497917|gb|ABN44583.1| Acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus sanguinis SK36] Length = 322 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 125/320 (39%), Positives = 189/320 (59%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK LL NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLLENKIASEEELEAIQARVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|78212424|ref|YP_381203.1| pyruvate dehydrogenase (lipoamide) [Synechococcus sp. CC9605] gi|78196883|gb|ABB34648.1| Pyruvate dehydrogenase (lipoamide) [Synechococcus sp. CC9605] Length = 369 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 125/319 (39%), Positives = 192/319 (60%), Gaps = 9/319 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMI 106 ++ L YR M L RRFE+K ++Y G + GF HL GQEAV G+ ++ + D Sbjct: 44 ERDTGLELYRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIGAMKRQHDWFC 103 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG + + + Sbjct: 104 STYRDHVHALSAGVPAREVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGFAFIAEGIPV 163 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G AF ++Y+R S+ + FGDG N GQ +E N+A LW L +I+V+ENN+ Sbjct: 164 ALGSAFTSRYKRDALGDASSNAVTAAFFGDGTCNNGQFFECMNMAQLWKLPIIFVVENNK 223 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA++ ++ SF + G +VDGMD+ AV+A +AV RA +GP ++E Sbjct: 224 WAIGMAHDRATSDPEIWRKASSFGMAGEEVDGMDVLAVRAAAQRAVERARAGEGPTLLEC 283 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R EE + DP++ + + L + +L+ IE ++ I Sbjct: 284 LTYRFRGHSLADPDELRAEEE-KLFWAKRDPLKALERDLTEAGLVNSDELRAIEKDIDDI 342 Query: 340 INNSVEFAQSDKEPDPAEL 358 + + V+FA S EPDPAEL Sbjct: 343 VQDCVDFALSAPEPDPAEL 361 >gi|209515192|ref|ZP_03264060.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. H160] gi|209504446|gb|EEA04434.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. H160] Length = 327 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +KE+ L AYR+M IR FEE+ + G + GF HL G+EA VG M L + D Sbjct: 5 TQLSKEKLLEAYRMMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMMHLNDADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ GR G+ +GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGRSTGVCRGKGGSMHIADLSKGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K R + + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKLRNTGGVGVCFFGDGASNQGVIFESMNLASVWRLPTIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + + A N + R F +PG+ VDG D AV + A+ R GP ++E+ RY Sbjct: 185 SSTWSVAADNIADRASGFGMPGVIVDGFDFFAVHEALGAAIERARDGGGPTLVEVKLSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D +++ +R++ + S +L+ I+ V+++I+ +V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKRFEERVMRAEMLSADELRGIDAKVKQLIDGAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ P A+L +D+ + Sbjct: 305 TEAKAAPLPSAADLLTDVYV 324 >gi|16077873|ref|NP_388687.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. subtilis str. 168] gi|221308642|ref|ZP_03590489.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. subtilis str. 168] gi|221312966|ref|ZP_03594771.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317892|ref|ZP_03599186.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. subtilis str. JH642] gi|221322165|ref|ZP_03603459.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. subtilis str. SMY] gi|81637507|sp|O31404|ACOA_BACSU RecName: Full=Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha; Short=Acetoin:DCPIP oxidoreductase-alpha; Short=Ao:DCPIP OR; AltName: Full=TPP-dependent acetoin dehydrogenase E1 subunit alpha gi|2633130|emb|CAB12635.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. subtilis str. 168] gi|2780395|dbj|BAA24296.1| YfjK [Bacillus subtilis] gi|2957146|gb|AAC05582.1| TPP-dependent acetoin dehydrogenase, E1 alpha-subunit [Bacillus subtilis subsp. subtilis str. 168] gi|291483247|dbj|BAI84322.1| acetoin dehydrogenase E1 component TPP-dependent alpha subunit [Bacillus subtilis subsp. natto BEST195] Length = 333 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 128/325 (39%), Positives = 187/325 (57%), Gaps = 5/325 (1%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG ++E E+ L Y+ ML IR FE+K +L+ G++ GF HL G+EAV VG+ L Sbjct: 7 EGLSLTE---EKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHL 63 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +GD + + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GI Sbjct: 64 HDGDSITSTHRGHGHCIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLDKGMLGANGI 123 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VG +L G A KY+++ + V FGDGA NQG +E N+AA+WNL V++V ENN Sbjct: 124 VGGGFTLACGSALTAKYKQTKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAENNG 183 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 Y T ASA + + R ++N+PG+ VDG DI AV ++A+ R GP +IE Sbjct: 184 YGEATPFEYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAIERARNGGGPSLIEC 243 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +TYR GH D Y+T++E E D I+ + LL A++ L +IE V + Sbjct: 244 MTYRNYGHFEGDAQTYKTKDERVEHLEEKDAIQGFKNYLLKETDANK--LSDIEQRVSES 301 Query: 340 INNSVEFAQSDKEPDPAELYSDILI 364 I +V F++ P +EL +D+ + Sbjct: 302 IEKAVSFSEDSPYPKDSELLTDVYV 326 >gi|321314535|ref|YP_004206822.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis BSn5] gi|320020809|gb|ADV95795.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis BSn5] Length = 333 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 128/325 (39%), Positives = 187/325 (57%), Gaps = 5/325 (1%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG ++E E+ L Y+ ML IR FE+K +L+ G++ GF HL G+EAV VG+ L Sbjct: 7 EGLSLTE---EKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHL 63 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +GD + + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GI Sbjct: 64 HDGDSITSTHRGHGHCIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLDKGMLGANGI 123 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VG +L G A KY+++ + V FGDGA NQG +E N+AA+WNL V++V ENN Sbjct: 124 VGGGFTLACGSALTAKYKQTKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAENNG 183 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 Y T ASA + + R ++N+PG+ VDG DI AV ++A+ R GP +IE Sbjct: 184 YGEATPFEYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAIERARNGGGPSLIEC 243 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +TYR GH D Y+T++E E D I+ + LL A++ L +IE V + Sbjct: 244 MTYRNYGHFEGDAQTYKTKDERVEHLEEKDAIQGFKNYLLKETDANK--LSDIEQRVSES 301 Query: 340 INNSVEFAQSDKEPDPAELYSDILI 364 I +V F++ P +EL +D+ + Sbjct: 302 IEKAVSFSEDSPYPKDSELLTDVYV 326 >gi|327470036|gb|EGF15500.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK330] Length = 322 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 125/320 (39%), Positives = 188/320 (58%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K+ L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKDLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + ++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMHKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK LL NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLLENKIASEEELEAIQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV FA+ P + DI Sbjct: 300 SVNFAEESPFPPLESAFEDI 319 >gi|291300945|ref|YP_003512223.1| pyruvate dehydrogenase E1 component subunit alpha [Stackebrandtia nassauensis DSM 44728] gi|290570165|gb|ADD43130.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Stackebrandtia nassauensis DSM 44728] Length = 326 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 123/283 (43%), Positives = 173/283 (61%), Gaps = 1/283 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 ML IRRFEE+ +LY + GF HLCIG+EAV VG+ +L + D +++ YREHGH LA Sbjct: 19 MLRIRRFEERCAELYSATKIRGFVHLCIGEEAVAVGVHKALADDDAVVSTYREHGHALAK 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ +MAE+ G+ G S G+GGSMH+F FYGG+ IVG + L G+A A+ Sbjct: 79 GITMDAVMAEMYGKATGCSHGRGGSMHLFDRDARFYGGNAIVGGGLPLAVGLALADTRLG 138 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ FGDGA +G+ +ES N+AALW L V++ ENNQYAMGT + R A T+ R Sbjct: 139 RRQVTACFFGDGAVAEGEFHESLNLAALWRLPVLFCCENNQYAMGTPLRREHANTDLGAR 198 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 V + + M+VDGMD+ AV+A +AVA+ H+ P+ +E+ TYR+R HSM DP YR + Sbjct: 199 AVGYGMRSMEVDGMDVLAVEAAAHEAVAHIGRHREPVFLELRTYRFRAHSMYDPDRYRDK 258 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 EI + DPI + L S+ D+ ++E V I+ Sbjct: 259 TEIESWKRR-DPIPALAASLRATADLSDSDMDKMESEVTAEID 300 >gi|320546529|ref|ZP_08040844.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus equinus ATCC 9812] gi|320448914|gb|EFW89642.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus equinus ATCC 9812] Length = 334 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 128/328 (39%), Positives = 190/328 (57%), Gaps = 3/328 (0%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 +LEG V + EQ + Y M IR F+ + +L G V G H +G+EA VG Sbjct: 8 YLEG-NVMNLSLEQYIDMYLKMQRIREFDMRINKLVRRGFVQGMTHFSVGEEAASVGAMA 66 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 LT D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG + Sbjct: 67 HLTYDDIIFSNHRGHGQCIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTN 126 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GIVG +L G A +Y++++ I V GDGA N+G +ES N+AA W L VI+ I N Sbjct: 127 GIVGGGYALAVGAALTQQYKKTNNIVVAFSGDGATNEGSFHESVNLAATWRLPVIFFIIN 186 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPII 276 N+Y + + RA+ + R ++ IPG DG D+ AV TM KAV + R+ GP I Sbjct: 187 NRYGISMDIRRATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVEHVRSGNGPAI 246 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +E+ +YR+ GHS +D YR++EE+N+ + DP+ + R L N AS +L I+ V Sbjct: 247 VEVESYRWFGHSTADAGKYRSKEEVNDWKKK-DPLVKFRTYLTENHLASHDELDAIDTQV 305 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDILI 364 K I+++ FAQ+ EPD + + DI + Sbjct: 306 VKEIDDAYAFAQNSPEPDLSVAFEDIWV 333 >gi|328946309|gb|EGG40453.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1087] Length = 322 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 125/320 (39%), Positives = 188/320 (58%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + ++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMHKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK LL NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLLENKIASEEELEAIQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|332366893|gb|EGJ44634.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1059] Length = 322 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 124/320 (38%), Positives = 189/320 (59%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK LL NK ASE +L+ ++ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLLENKIASEEELEAVQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|295681445|ref|YP_003610019.1| pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. CCGE1002] gi|295441340|gb|ADG20508.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. CCGE1002] Length = 327 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 186/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +KE+ L AYR+M IR FEE+ + G + GF HL G+EA VG M L + D Sbjct: 5 TQLSKEKLLEAYRMMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMMHLNDADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ GR G+ +GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGRSTGVCRGKGGSMHIADLSKGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K +++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKLKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + + A N + R F +PG+ VDG D AV + A+ R GP ++E+ RY Sbjct: 185 SSTWSVAADNIADRASGFGMPGVIVDGFDFFAVHEALGAAIERARGGGGPTLVEVKLSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D +++ +R++ + S +L+ ++ V+++I+ +V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKRFEERVVRAEMLSADELRGVDAEVKQLIDGAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ P A+L +D+ + Sbjct: 305 TEAKAAPLPTAADLLTDVYV 324 >gi|15898353|ref|NP_342958.1| pyruvate dehydrogenase alpha subunit (lipoamide) [Sulfolobus solfataricus P2] gi|13814758|gb|AAK41748.1| Pyruvate dehydrogenase, alpha subunit (lipoamide). (pdhA-2) [Sulfolobus solfataricus P2] gi|261602925|gb|ACX92528.1| dehydrogenase E1 component [Sulfolobus solfataricus 98/2] Length = 332 Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 125/325 (38%), Positives = 185/325 (56%), Gaps = 8/325 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K + L Y+ MLLIR E A +L+ G + GF HL +G+EAV VG+ +L + D + Sbjct: 4 DIPKSKLLDMYKKMLLIRYHELTAKELFASGKIPGFVHLYVGEEAVAVGVMSTLRDDDYI 63 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G+D +++AE+ G++ G+ KGKGGSMH+F G G +GIVG Sbjct: 64 TSTHRGHGHCIAKGLDVKRMLAEIMGKKTGVCKGKGGSMHIFDYSKGMLGANGIVGGGAP 123 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A A K + D++ V GDGA NQG V ES N++A+W L VI+V+E+N YAM T Sbjct: 124 HAVGAALAFKLKGLDRVAVAFIGDGAMNQGVVLESLNLSAIWKLPVIFVVEDNMYAMSTR 183 Query: 226 V-------SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 R SA ++ +R + F IP ++VDGMD+ AV +AV R GP ++ Sbjct: 184 SLVPGKLQPRHSAAKSYVERALGFGIPAVEVDGMDVLAVYEVAKEAVDRARRGGGPSLLH 243 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYR+ GH DP YR +EE EM DPI R +L+ N + +L +I+ + Sbjct: 244 CKTYRFFGHFEGDPLVYRDKEE-EEMWRKRDPITLFRDKLVSNNIINSEELDKIDREAKA 302 Query: 339 IINNSVEFAQSDKEPDPAELYSDIL 363 I +++FA+ P+ E +D+ Sbjct: 303 EIEQALKFAEESPYPEVEEALTDVF 327 >gi|187920594|ref|YP_001889626.1| pyruvate dehydrogenase [Burkholderia phytofirmans PsJN] gi|187719032|gb|ACD20255.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia phytofirmans PsJN] Length = 327 Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E +KE L AYR+M IR FEE+ + G + GF HL G+EA VG + L + D Sbjct: 5 TELSKEDLLKAYRMMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLNDADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ GR+ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGRKTGVCHGKGGSMHIADLSKGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A KY++S + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLICGAALAAKYKKSGGVGVCFFGDGASNQGVIFESLNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + + A N + R F +PG+ VDG D AV + +A+ R GP ++E+ RY Sbjct: 185 SSTWSVATDNIADRASGFGMPGVIVDGFDFFAVHEALGEAIERARQGGGPTLVEVKFSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D +++ +R++ + S L+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKRFEERVVRAEMLSVDQLRGVDAEVKSLIDSAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ P +L SD+ + Sbjct: 305 TEAKAAPLPTAEDLLSDVYV 324 >gi|154685284|ref|YP_001420445.1| hypothetical protein RBAM_008300 [Bacillus amyloliquefaciens FZB42] gi|154351135|gb|ABS73214.1| AcoA [Bacillus amyloliquefaciens FZB42] Length = 333 Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 126/325 (38%), Positives = 186/325 (57%), Gaps = 5/325 (1%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG ++E E+ L Y+ ML IR FE+K +L+ G++ GF HL G+EAV G+ L Sbjct: 7 EGLSLTE---EKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAAGVCAHL 63 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +GD + + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GI Sbjct: 64 DDGDSITSTHRGHGHCIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLDKGMLGANGI 123 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VG +L G A KY+++ + V FGDGA NQG +E N+AA+WNL V+++ ENN Sbjct: 124 VGGGFTLACGSALTAKYKQTKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFIAENNG 183 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 Y T+ ASA + + R ++N+PG+ VDG DI AV +A+ R GP +IE Sbjct: 184 YGEATTFEYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAGEAIERARNGGGPSLIEC 243 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +TYR GH D Y+T++E E D I+ + LL A++ L +IE V + Sbjct: 244 MTYRNYGHFEGDAQTYKTKDEKTEHLEEKDAIQGFKNYLLKETDANK--LSDIEQRVSES 301 Query: 340 INNSVEFAQSDKEPDPAELYSDILI 364 I +V F++ P +EL +D+ + Sbjct: 302 IEKAVSFSEKSPYPKESELLTDVYV 326 >gi|306831144|ref|ZP_07464305.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426710|gb|EFM29821.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 334 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 126/328 (38%), Positives = 191/328 (58%), Gaps = 3/328 (0%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 +LEG + ++EQ + Y M IR F+ + +L G V G H +G+EA VG Sbjct: 8 YLEG-NMMNLSQEQYIDMYLKMQRIREFDMRINKLVRRGFVQGMTHFSVGEEAASVGAMA 66 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 LT D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG + Sbjct: 67 HLTYDDIIFSNHRGHGQCIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTN 126 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GIVG +L G A Y+++D I V GDGA N+G +ES N+AA W L VI+ I N Sbjct: 127 GIVGGGYALAVGAALTQHYQKTDNIVVAFSGDGATNEGSFHESVNLAATWGLPVIFFIIN 186 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPII 276 N+Y + ++RA+ + R ++ IPG DG D+ AV TM KAV + R+ GP I Sbjct: 187 NRYGISMDITRATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVDHVRSGNGPAI 246 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +E+ +YR+ GHS +D YR++EE+++ + DP+ + R L N AS +L I+ V Sbjct: 247 VEVESYRWFGHSTADAGKYRSKEEVDDWKKK-DPLVKFRTYLTENHLASHDELDAIDAQV 305 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDILI 364 K I+++ FAQ+ EPD + + D+ + Sbjct: 306 VKEIDDAYAFAQNSPEPDLSVAFEDVWV 333 >gi|323351572|ref|ZP_08087226.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis VMC66] gi|322122058|gb|EFX93784.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis VMC66] Length = 322 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 124/320 (38%), Positives = 189/320 (59%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK L+ NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLVENKIASEEELEAIQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|306833256|ref|ZP_07466385.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus bovis ATCC 700338] gi|304424623|gb|EFM27760.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus bovis ATCC 700338] Length = 335 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 126/328 (38%), Positives = 191/328 (58%), Gaps = 3/328 (0%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 +LEG + ++EQ + Y M IR F+ + +L G V G H +G+EA VG Sbjct: 9 YLEG-NMMNLSQEQYIDMYLKMQRIREFDMRINKLVRRGFVQGMTHFSVGEEAASVGAIA 67 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 LT D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG + Sbjct: 68 HLTYDDIIFSNHRGHGQCIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTN 127 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GIVG +L G A Y+++D I V GDGA N+G +ES N+AA W L VI+ I N Sbjct: 128 GIVGGGYALAVGAALTQDYKKTDNIVVAFSGDGATNEGSFHESVNLAATWGLPVIFFIIN 187 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPII 276 N+Y + ++RA+ + R ++ IPG DG D+ AV TM KAV + R+ GP I Sbjct: 188 NRYGISMDITRATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVDHVRSGNGPAI 247 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +E+ +YR+ GHS +D YR++EE+++ + DP+ + R L N AS +L I+ V Sbjct: 248 VEVESYRWFGHSTADAGKYRSKEEVDDWKKK-DPLVKFRTYLTENHLASHDELDAIDAQV 306 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDILI 364 K I+++ FAQ+ EPD + + D+ + Sbjct: 307 VKEIDDAYAFAQNSPEPDLSVAFEDVWV 334 >gi|296161095|ref|ZP_06843905.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. Ch1-1] gi|295888618|gb|EFG68426.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. Ch1-1] Length = 327 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E +K++ L AYR+M IR FEE+ + G + GF HL G+EA VG + L + D Sbjct: 5 TELSKDELLKAYRMMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLNDADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ GR+ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGRKTGVCHGKGGSMHIADLSKGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A KYR+S + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLICGAALAAKYRKSGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + + A N + R F +PG+ VDG D AV + +A+ R GP ++E+ RY Sbjct: 185 SSTWSVATDNIADRASGFGMPGVIVDGFDFFAVHEALGEAIERARHGGGPTLVEVKFSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D +++ +R++ S L+ ++ V+ +I+ +V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKRFEERVVRAGMLSADQLRGVDAEVKTLIDTAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ P +L SD+ + Sbjct: 305 TEAKAAPLPTAEDLLSDVYV 324 >gi|108805833|ref|YP_645770.1| pyruvate dehydrogenase [Rubrobacter xylanophilus DSM 9941] gi|108767076|gb|ABG05958.1| Pyruvate dehydrogenase (lipoamide) [Rubrobacter xylanophilus DSM 9941] Length = 332 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 127/314 (40%), Positives = 183/314 (58%), Gaps = 5/314 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ + RLML IRRFEEK +L+ G + GF HL IG+EAV VG +L E D++ Sbjct: 2 LGEEKLVGMLRLMLRIRRFEEKLAELFKRGKLPGFVHLYIGEEAVAVGACSALREDDRIT 61 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH++A G D S++MAEL G++ G +GKGGSMH G G +GIVG + + Sbjct: 62 STHRGHGHVIAKGADVSRMMAELLGKEAGYCRGKGGSMHTVDFSLGIMGTNGIVGGGIPI 121 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A+ ++ D + V FGDGA+NQG +E N+AA+W L VI++ ENN Y T Sbjct: 122 AVGSAWGDRQLGRDTVTVSFFGDGASNQGVFFEGMNLAAIWKLPVIFLCENNGYTEWTPT 181 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + +A S RGV F IP +QVDG D+ +V + +AV RA +GP +IE TYR+ G Sbjct: 182 EKLTA-GRISDRGVPFGIPSVQVDGNDVISVHEAVSEAVGRARAGEGPSLIEARTYRWHG 240 Query: 287 HSMSDPA---NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 H+ + A YR EEI E + DPI RL+ + +++ ++ ++ I ++ Sbjct: 241 HNEGEEAFSGPYRPEEEIEEWKGK-DPITTFAARLVEQGVFAREEIERVDAEEKERIEDA 299 Query: 344 VEFAQSDKEPDPAE 357 V FA PDP E Sbjct: 300 VRFAVESAYPDPEE 313 >gi|319939105|ref|ZP_08013469.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus anginosus 1_2_62CV] gi|319812155|gb|EFW08421.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus anginosus 1_2_62CV] Length = 322 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 125/320 (39%), Positives = 187/320 (58%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEGIRRMDLKIAQLVKKGKVPGMTHFSVGEEAASVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEIMGKYNGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + ++DKI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMHQTDKIVVCFFGDGATNEGIFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSTAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK LL N+ AS+ +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLLANQIASDEELEAIQAEVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|225574263|ref|ZP_03782873.1| hypothetical protein RUMHYD_02327 [Blautia hydrogenotrophica DSM 10507] gi|225038485|gb|EEG48731.1| hypothetical protein RUMHYD_02327 [Blautia hydrogenotrophica DSM 10507] Length = 326 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 129/325 (39%), Positives = 193/325 (59%), Gaps = 6/325 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S NKE+ + Y M++IR+FEEKAG ++ G + GF HL IG+EAV G+ +L + D Sbjct: 3 STMNKEKFMDIYNRMVMIRKFEEKAGTIFSQGQLAGFLHLYIGEEAVGAGVCAALNDDDY 62 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +++ +R HGH++A G D +KIMAEL G+ G KGKGGSMH+ G G GIVG + Sbjct: 63 IVSTHRGHGHLIAKGGDVNKIMAELFGKSTGYCKGKGGSMHVADFSKGMLGACGIVGGGI 122 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + G A K + ++++ V FGDGA+N+G +ES N AA NL VI+++ENN Y T Sbjct: 123 PIAVGAALTIKRKHTNQVAVTFFGDGASNEGSFHESINFAAAQNLPVIFLVENNGYGEFT 182 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +R++ N + R + IPG+ VDGMD AV T + V R +GP++IE T+R Sbjct: 183 PQNRSTRIENIADRAAGYGIPGVIVDGMDAVAVYETTKEWVEKLRNGEGPVLIEAKTHRK 242 Query: 285 RGHSMSDPA-----NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 GHS + A YR EE ++ PIE ++K LL + A + +L+E+E ++ Sbjct: 243 VGHSEGESAFLDGQTYRLPEE-EKIAMETCPIENLKKYLLDHDLAQKEELEEVERAAQEK 301 Query: 340 INNSVEFAQSDKEPDPAELYSDILI 364 I +VE+A++ P +LY+D + Sbjct: 302 IEAAVEYAKNSPFPTEEDLYTDTWV 326 >gi|88809135|ref|ZP_01124644.1| Pyruvate dehydrogenase E1 alpha subunit [Synechococcus sp. WH 7805] gi|88787077|gb|EAR18235.1| Pyruvate dehydrogenase E1 alpha subunit [Synechococcus sp. WH 7805] Length = 364 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 124/319 (38%), Positives = 192/319 (60%), Gaps = 9/319 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMI 106 N+ L YR M L RRFE+K ++Y G + GF HL GQEAV G+ ++ + D Sbjct: 39 NRATGLELYRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIGAMKRQHDWFC 98 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG +G + + Sbjct: 99 STYRDHVHALSAGVPAREVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGFAFIGEGIPV 158 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G AF ++Y+R S+ + FGDG N GQ +E N+A LW L +++V+ENN+ Sbjct: 159 ALGSAFTSRYKRDALGDSSSNAVTAAFFGDGTCNNGQFFECLNMAQLWKLPILFVVENNK 218 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA++ ++ SF + G +VDGMD+ AV+A +AV RA +GP ++E Sbjct: 219 WAIGMAHDRATSDPEIWRKASSFGMAGEEVDGMDVLAVRAAAQRAVERARAGEGPTVLEC 278 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R EE + + DP++ + + LL + +L+ IE + Sbjct: 279 LTYRFRGHSLADPDELRAEEE-KQFWAKRDPLKALERELLEANLVTAEELRAIEKEIDAE 337 Query: 340 INNSVEFAQSDKEPDPAEL 358 + + V+FA S EPD +EL Sbjct: 338 VQDCVDFALSAPEPDGSEL 356 >gi|302758212|ref|XP_002962529.1| hypothetical protein SELMODRAFT_404383 [Selaginella moellendorffii] gi|300169390|gb|EFJ35992.1| hypothetical protein SELMODRAFT_404383 [Selaginella moellendorffii] Length = 378 Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 135/341 (39%), Positives = 195/341 (57%), Gaps = 47/341 (13%) Query: 34 VDIPF-LEGFEVSEFNKEQELSA------YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI 86 VDIP G + E SA +++M ++RR E A LY + GFCHL Sbjct: 55 VDIPVPYAGHRCDPPEQRVETSAKELVDFFKVMYVMRRMEIAADSLYKAKFIRGFCHLYD 114 Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 GQEAV VGM+ +LT+ D +ITAYR+H + G ++MAEL GR+ G S GKGGSMHM Sbjct: 115 GQEAVCVGMEAALTKEDAIITAYRDHCTHIGRGGTVLEVMAELMGRKSGCSLGKGGSMHM 174 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 ++ + FYGG+GIVGAQ +LG G+AFA KY + + + + +GDGAANQGQ++E+ NI+AL Sbjct: 175 YNKEGNFYGGNGIVGAQTALGAGLAFAQKYNKQNAVSLALYGDGAANQGQLFEAMNISAL 234 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 W+L VI+V ENN Y MGT+ R++ + KRG +PG+++DGMD+ AVK + V Sbjct: 235 WDLPVIFVCENNHYGMGTAEWRSAKSPEYYKRGDY--VPGLKIDGMDVLAVK----QGVR 288 Query: 267 YCRAH---KGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 + + H KGPI DPIE+VRK LL + Sbjct: 289 FAKEHALTKGPI-------------------------------ERDPIERVRKLLLAKEI 317 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 + DLK +E + ++ +V A+ +P+ EL++ + + Sbjct: 318 VTVADLKNLEKQAKAEVDEAVNQAKEGGQPETHELFTHVHV 358 >gi|70729539|ref|YP_259277.1| acetoin dehydrogenase E1 component subunit alpha [Pseudomonas fluorescens Pf-5] gi|68343838|gb|AAY91444.1| acetoin dehydrogenase E1 component, alpha subunit [Pseudomonas fluorescens Pf-5] Length = 325 Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + +Q L AYR+M IR FEE+ + G + GF HL G+EA G+ L + D Sbjct: 3 TPLTTDQLLHAYRVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLRDDDC 62 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A GVD +MAE+ G++ G+ +GKGGSMH+ + G G +GIVGA Sbjct: 63 IASNHRGHGHCIAKGVDVYGMMAEIYGKKTGVCQGKGGSMHIADFEKGMLGANGIVGAGA 122 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A + + +D + VV FGDG +N+G V+E+ N+A++WNL +++ ENN YA T Sbjct: 123 PLVVGAALAARLQGTDGVSVVFFGDGGSNEGAVFEAMNMASVWNLPCLFIAENNGYAEAT 182 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + + A + + R F +PG+ VDG D AV AV RA +GP +IE+ RY Sbjct: 183 ASNWSVACDHIADRAAGFGMPGVTVDGFDFFAVHEAAGAAVERARAGEGPSLIEVKLTRY 242 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR +E+ R ++D + Q R+R + L +I+ +V +I ++V Sbjct: 243 YGHFEGDAQTYRAPDEVKHYREHNDCLMQFRERTTRSGLVQASQLDQIDADVEALIEDAV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 A+SD +P PA+L SD+ + Sbjct: 303 RKAKSDPKPSPADLLSDVYV 322 >gi|254252232|ref|ZP_04945550.1| Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component [Burkholderia dolosa AUO158] gi|124894841|gb|EAY68721.1| Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component [Burkholderia dolosa AUO158] Length = 349 Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 186/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ ++++ L AYRLM IR FEE+ + G + GF HL G+EA VG M L D Sbjct: 27 TQLSRDKLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMMHLGVADY 86 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ G G +GIVGA Sbjct: 87 VATTHRGHGHCIAKGVDVRGMMAEIYGKKTGVCHGKGGSMHIADLSMGMLGANGIVGAGG 146 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K+R++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 147 PLVCGAALAAKHRKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 206 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 207 SSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVKFSRY 266 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + +L+ ++ V+ +I++SV Sbjct: 267 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFEARVVRAEALTTDELRAVDAQVKALIDDSV 326 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 327 AQAKAAPLPDAADLLTDVYV 346 >gi|325696504|gb|EGD38394.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK160] Length = 322 Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 190/320 (59%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L + D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNKDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNIEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE++E + DPIE +RK LL NK ASE +L+ ++ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVDEWKKK-DPIENLRKYLLENKIASEEELEAVQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|282857205|ref|ZP_06266449.1| pyruvate dehydrogenase E1 component subunit alpha [Pyramidobacter piscolens W5455] gi|282584991|gb|EFB90315.1| pyruvate dehydrogenase E1 component subunit alpha [Pyramidobacter piscolens W5455] Length = 319 Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 123/316 (38%), Positives = 182/316 (57%), Gaps = 1/316 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ L YR M +IR FE KA +L+ G + GF HL +G+EAV G+ +L +GD + + Sbjct: 4 TKEKLLDMYRTMFMIRSFELKAAELFAAGRIPGFVHLYVGEEAVATGVCANLKKGDYITS 63 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH+LA G D + +MAEL G+ G KGKGGSMH+ G G +GIVGA + Sbjct: 64 THRGHGHLLAKGGDVNLMMAELFGKASGYCKGKGGSMHIADVDLGILGANGIVGAGFPIA 123 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G AF+ KYR++ + V FGD A+N+G +E N A++ L V++V ENN Y + Sbjct: 124 VGAAFSCKYRKTGDVTVCFFGDAASNRGTFHEGINFASIHKLPVVFVCENNMYGISNYQK 183 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + R + IPG VDG D+ AV A+ R GP +IE T+R RGH Sbjct: 184 AGMNINDIADRSEGYGIPGASVDGNDVMAVYEAASAAIENARKGDGPSLIECKTWRQRGH 243 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 DP Y+ EE + DP+ ++ KRL +AS+ +L+ ++ + + I +V+FA Sbjct: 244 FEGDPGKYKDPEEQKNWVAK-DPLPRLEKRLEELGYASKDELEAMQKEILQRIEAAVQFA 302 Query: 348 QSDKEPDPAELYSDIL 363 +S +P P+EL +D+L Sbjct: 303 ESGPDPSPSELLTDVL 318 >gi|319956741|ref|YP_004168004.1| pyruvate dehydrogenase (acetyl-transferring) [Nitratifractor salsuginis DSM 16511] gi|319419145|gb|ADV46255.1| Pyruvate dehydrogenase (acetyl-transferring) [Nitratifractor salsuginis DSM 16511] Length = 321 Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 121/308 (39%), Positives = 183/308 (59%), Gaps = 3/308 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 + M L RRFE A + Y G + GF HL IGQEA+ V + GD + T YREH Sbjct: 10 FYTMALGRRFEYAAKEHYMTGEISGFLHLDIGQEALSVAAMKAFDHGD-VFTTYREHIMA 68 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G++ +MAEL G++ G+S+G+GGSMH+F + FYGG IVG + G A+A K Sbjct: 69 IARGIEPKAVMAELFGKKTGVSEGRGGSMHLFDPSHFFYGGDAIVGGHLPNAVGCAYARK 128 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +++S+ + FGDGA N G +ES NIA+ W L ++++ ENN+YA+GT ++R + Sbjct: 129 FQKSEHGVMAVFGDGATNGGAFFESLNIASAWKLPMLFLCENNRYAIGTEITRVAPFLEQ 188 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 +K+ + +P +VDG D AV + +A Y + GPI IE TYR+ GHSMSDP Y Sbjct: 189 AKKAEPY-MPAKEVDGNDALAVYEAVKEAQEYIQKGHGPIFIEAFTYRWEGHSMSDPGTY 247 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R++EE+ E+ DPIE+++K L S+ ++ +E ++ +V+FA EP+ Sbjct: 248 RSQEEM-EIWKRKDPIERMKKVLKERYMMSDEQIEALEKKAEAEVDAAVKFAAESPEPEV 306 Query: 356 AELYSDIL 363 EL+ + Sbjct: 307 DELFDHVF 314 >gi|325529874|gb|EGD06712.1| pyruvate dehydrogenase E1 component subunit alpha [Burkholderia sp. TJI49] Length = 327 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 186/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +++ L AYRLM IR FEE+ + G + GF HL G+EA VG M L D Sbjct: 5 TQLSRDTLLEAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMMHLGIADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCHGKGGSMHIADLSMGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K++++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKHKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 185 SSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVKFTRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + G+L+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFESRVVRAEALTSGELRAVDAQVKTLIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AQAKAAPLPDAADLLTDVYV 324 >gi|113953963|ref|YP_729978.1| pyruvate dehydrogenase E1 subunit alpha [Synechococcus sp. CC9311] gi|113881314|gb|ABI46272.1| Pyruvate dehydrogenase E1 alpha subunit [Synechococcus sp. CC9311] Length = 368 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 122/319 (38%), Positives = 194/319 (60%), Gaps = 9/319 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMI 106 ++E L+ YR M L RRFE+K ++Y G + GF HL GQEAV G+ ++ + D Sbjct: 43 DRETGLALYRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIGAMKRQHDWFC 102 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS + GG +G + + Sbjct: 103 STYRDHVHALSAGVPAREVMSELFGKETGCSKGRGGSMHLFSKPHHMLGGFAFIGEGIPV 162 Query: 167 GTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G AF ++Y+R SD + FGDG N GQ +E N+A LW L +++V+ENN+ Sbjct: 163 ALGAAFTSRYKRDAMGDSSSDSVTAAFFGDGTCNNGQFFECLNMAQLWKLPILFVVENNK 222 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA++ ++ +F + G +VDGMD+ AV+A ++A+ RA +GP ++E Sbjct: 223 WAIGMAHDRATSDPEIWRKAAAFGMAGEEVDGMDVLAVRAAAERAIERARAGEGPTVLEC 282 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R EE + + DP++ + L+ + S +L+ IE + Sbjct: 283 LTYRFRGHSLADPDELRAEEE-KQFWAKRDPLKAFERDLVSDGLVSADELRAIEKEIDAE 341 Query: 340 INNSVEFAQSDKEPDPAEL 358 + + V+FA + EPD +EL Sbjct: 342 VQDCVDFALNAPEPDGSEL 360 >gi|162452073|ref|YP_001614440.1| pyruvate dehydrogenase (acetyl-transferring) [Sorangium cellulosum 'So ce 56'] gi|161162655|emb|CAN93960.1| Pyruvate dehydrogenase (acetyl-transferring) [Sorangium cellulosum 'So ce 56'] Length = 325 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 125/306 (40%), Positives = 185/306 (60%), Gaps = 3/306 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 LS YR M IRRFEE+A + Y +GGF HL IGQE + VG +L D ++T YR+H Sbjct: 12 LSLYRKMFQIRRFEEEAARAYAQSKIGGFLHLYIGQEPIAVGASAALRPDDYVMTTYRDH 71 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G LA G+ + MAEL G+ G SKG GGSMH F ++ GG+GIVG + + G AF Sbjct: 72 GLALARGMSSRAAMAELYGKVTGCSKGLGGSMHFFDKEHNMLGGYGIVGGHIPIAVGTAF 131 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+KYR D++ +V FG+GA + G +E ++AALW L +++V ENN+YAMGT +SR + Sbjct: 132 ASKYRGEDRVSMVFFGEGAVSIGDFHEGMSLAALWKLPIVFVCENNEYAMGTPLSRTLSV 191 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + S + +++ + + + + V+ + +AVA R P ++E+ TYR+RGHSMSDP Sbjct: 192 EDVSLKALAYGMERDRFNSEHVLQVRDRLAEAVARARTQSEPTLVEIRTYRFRGHSMSDP 251 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YRT+EE+ E + D + +R R+ + + L+ IE V I +++ FA+ E Sbjct: 252 GKYRTKEELEERKKK-DVL--LRSRIELEEKGHKAALEAIEREVEDEITDAIRFAEESPE 308 Query: 353 PDPAEL 358 P P L Sbjct: 309 PGPEVL 314 >gi|292654833|ref|YP_003534730.1| 2-oxoacid dehydrogenase E1 component subunit alpha [Haloferax volcanii DS2] gi|291372030|gb|ADE04257.1| 2-oxoacid dehydrogenase E1 component alpha subunit [Haloferax volcanii DS2] Length = 344 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 123/309 (39%), Positives = 175/309 (56%), Gaps = 1/309 (0%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 A R ML IR F+ KA L+ G + GF HL +G+EAV VG +L D + + +R HGH Sbjct: 15 ALRRMLTIRAFDTKAADLFSDGELPGFVHLYVGEEAVGVGACSALESDDYITSTHRGHGH 74 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +A G+D +MAEL G+ G GKGGSMH+ G G +GIVGA L TG A + Sbjct: 75 CIAKGLDPDLMMAELFGKADGYCNGKGGSMHIADVDAGMLGANGIVGAGPPLATGAALTS 134 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + D + + FGDGA QGQV+E+ N+AA W+L ++++ENNQY T V + N Sbjct: 135 HLKGEDTVALAFFGDGAVAQGQVHEAVNLAATWSLPAVFLVENNQYGEATPVEKQHNVQN 194 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S+ ++NIPG VDGMDI AV + +A +GP IE TYRY GH D Sbjct: 195 LSETAEAYNIPGFTVDGMDITAVYEAVKEARKRAADGEGPTFIEAETYRYHGHFEGDQQP 254 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT E++ + + D IE ++RL+ +E + E++ + + I ++V A+ PD Sbjct: 255 YRTEEDVA-IWKDRDAIETFKRRLVDAGTITEAEFDEMKAEIDQQIEDAVGKAKDAAYPD 313 Query: 355 PAELYSDIL 363 P+E Y D+ Sbjct: 314 PSEAYEDMF 322 >gi|167746780|ref|ZP_02418907.1| hypothetical protein ANACAC_01492 [Anaerostipes caccae DSM 14662] gi|167653740|gb|EDR97869.1| hypothetical protein ANACAC_01492 [Anaerostipes caccae DSM 14662] Length = 380 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 132/333 (39%), Positives = 184/333 (55%), Gaps = 1/333 (0%) Query: 30 SVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQE 89 + C L + +KEQ L YR M+ IR FE +A +L M + H G+E Sbjct: 34 AAQCTKGELLTTMRNNAISKEQLLEFYRKMIRIREFENEAIELAKMNLTRAAVHTYNGEE 93 Query: 90 AVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFST 149 A+ VG+ L + D + + +R HGH +A G D + AEL R+ G KGKGGSMH+ Sbjct: 94 AIAVGVCAHLNDQDYITSTHRGHGHCIAKGADMKLMFAELMARESGYCKGKGGSMHIADM 153 Query: 150 KNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G G +GIVG + + G AFA KY S I V FGDGA+NQG +E+ N+A++ L Sbjct: 154 SIGMLGANGIVGGGLPISVGAAFALKYTSSKNIAVCFFGDGASNQGSFHEAVNLASVMKL 213 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 VI+V ENNQ+A+ TS ++S N S R V + I G+ VDG DI AV + +A R Sbjct: 214 PVIFVCENNQWAISTSQKKSSNIENLSDRAVGYGIEGITVDGNDIEAVYSEFGRACEKVR 273 Query: 270 AHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 GPI++EM TYR GH D NYR+REE+ E + PI V K L E D Sbjct: 274 GGSGPILMEMKTYRIAGHYYGDNENYRSREEVTEWKEKC-PIRHVEKLLAEEYGFKEEDF 332 Query: 330 KEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 K+I+ ++ + E A+++KEP P +L +D+ Sbjct: 333 KKIQKEELAVVLEASESAKNEKEPSPEDLRNDL 365 >gi|322516770|ref|ZP_08069676.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus vestibularis ATCC 49124] gi|322124692|gb|EFX96144.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus vestibularis ATCC 49124] Length = 334 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 122/327 (37%), Positives = 190/327 (58%), Gaps = 1/327 (0%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 +E ++ + +KE L + M IR F+ + +L G V G H +G+EA VG Sbjct: 7 IEEIDMVKLSKETHLEMFTKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVQH 66 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L+ D + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +G Sbjct: 67 LSYDDIFFSNHRGHGQSIAQDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNG 126 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG +L G A +Y+ + I V GDGA N+G +ES N+AA W L VI+ I NN Sbjct: 127 IVGGGYALAVGAALTQQYKETGNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINN 186 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIII 277 +Y + + RA+ + R ++ IPG DG D+ AV TM KAV + R GP I+ Sbjct: 187 RYGISMDIHRATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVEHVRGGNGPAIV 246 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E+ +YR+ GHS +D YRT+EE++E ++N+DPI + R L+ AS +L I+ V+ Sbjct: 247 EVESYRWFGHSTADAGVYRTKEEVDEWKNNNDPIIKYRDYLVSENIASAEELDAIQSQVK 306 Query: 338 KIINNSVEFAQSDKEPDPAELYSDILI 364 ++++ EFAQ+ +P+ + + D+ + Sbjct: 307 AEVDSAYEFAQNSPDPELSVAFEDVWV 333 >gi|269795187|ref|YP_003314642.1| pyruvate dehydrogenase E1 component subunit alpha [Sanguibacter keddieii DSM 10542] gi|269097372|gb|ACZ21808.1| pyruvate dehydrogenase E1 component, alpha subunit [Sanguibacter keddieii DSM 10542] Length = 376 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 127/310 (40%), Positives = 190/310 (61%), Gaps = 3/310 (0%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 + +L YR MLL+RRFEE+A + Y +GG+CHL +G+EA +VG+ +L D + T Y Sbjct: 20 DDQLDRYRQMLLVRRFEERAARAYTEAEIGGYCHLNLGEEATVVGLMAALEPTDYLFTNY 79 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 REHG+ L G+ +IMAEL GR+ G+S G GGSMH+F ++ GG+GIVG Q+ L TG Sbjct: 80 REHGYALCRGISPGRIMAELYGRRDGVSGGWGGSMHLFDAQSRLLGGYGIVGGQLPLATG 139 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 A A YR ++ + G+G N G +ES NIAALW L V+YV+ NN MGT+V ++ Sbjct: 140 AALAVDYRSGTEVVMCLMGEGTTNIGAFHESLNIAALWGLPVVYVVVNNGTGMGTTVEQS 199 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 SA+ +R S+ + +VDG D AV+ +AV R+ + P ++E + R RGHS+ Sbjct: 200 SAEPEIFRRAASYRMASARVDGTDPVAVQHAAAEAVRVARSGR-PYLLEATSSRLRGHSV 258 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 DPA YR+ E + +R+ DP+ + L+ + +E L EI+ V ++ +V FA++ Sbjct: 259 VDPAAYRSPETVAAVRAA-DPVSLLAASLVEHG-VTEESLAEIDREVLGVVAEAVAFAEA 316 Query: 350 DKEPDPAELY 359 PDP+ L+ Sbjct: 317 SPHPDPSTLF 326 >gi|217969834|ref|YP_002355068.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Thauera sp. MZ1T] gi|217507161|gb|ACK54172.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thauera sp. MZ1T] Length = 337 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 120/284 (42%), Positives = 168/284 (59%), Gaps = 6/284 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + EL ML IRR EEK +LYG G + GF HL IG+EA G +L D ++ Sbjct: 12 ERPLELRLLADMLRIRRMEEKCAELYGAGRIRGFLHLYIGEEACATGAMHALAADDNVVA 71 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YREHGH L GV IMAE+ G+ G S+G+GGSMH+F FYGG+ IVG + L Sbjct: 72 TYREHGHALLRGVGMDAIMAEMFGKAAGCSRGRGGSMHLFDVARRFYGGNAIVGGGLPLA 131 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+A A++ + ++ + FG+GA +G +ES N+AALW L V++ ENN YAMGT+++ Sbjct: 132 VGLALADRLQGVRRVTLCVFGEGAMAEGAFHESINLAALWQLPVLFCCENNLYAMGTALA 191 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R+ +QT+ + S+ + + DGMD+RAV T+ +AV R GP +E+ TYR+R H Sbjct: 192 RSESQTDLCAKAASYRVATFRADGMDVRAVFDTVSRAVRQVREGGGPAFVELQTYRFRAH 251 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 SM DP YR + EI E + PI + +L +EG L E Sbjct: 252 SMFDPDLYRDKAEIEEWK-QRGPIHSLSAQL-----KAEGRLDE 289 >gi|91779775|ref|YP_554983.1| pyruvate dehydrogenase (lipoamide) [Burkholderia xenovorans LB400] gi|91692435|gb|ABE35633.1| Pyruvate dehydrogenase (lipoamide) [Burkholderia xenovorans LB400] Length = 327 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E +K++ L AYR+M IR FEE+ + G + GF HL G+EA VG + L + D Sbjct: 5 TELSKDELLKAYRMMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLNDADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ GR+ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGRKTGVCHGKGGSMHIADLSKGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A KY++S + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLICGAALAAKYKKSGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + + A N + R F +PG+ VDG D AV + +A+ R GP ++E+ RY Sbjct: 185 SSTWSVATDNIADRASGFGMPGVIVDGFDFFAVHEALGEAIERARHGGGPTLVEVKFSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D +++ +R++ S L+ ++ V+ +I+ +V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKRFEERVVRAGMLSADQLRGVDAEVKTLIDTAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ P +L SD+ + Sbjct: 305 TEAKAAPLPTAEDLLSDVYV 324 >gi|115351828|ref|YP_773667.1| pyruvate dehydrogenase [Burkholderia ambifaria AMMD] gi|172060799|ref|YP_001808451.1| pyruvate dehydrogenase (acetyl-transferring) [Burkholderia ambifaria MC40-6] gi|115281816|gb|ABI87333.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia ambifaria AMMD] gi|171993316|gb|ACB64235.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia ambifaria MC40-6] Length = 327 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 120/320 (37%), Positives = 189/320 (59%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ ++++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L D Sbjct: 5 TQLSRDKLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLGLEDY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ +GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCRGKGGSMHIADLSMGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K++++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKHKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + S + A N + R F +PG+ VDG D AV + +AVA R+ GP ++E+ RY Sbjct: 185 ASSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVARARSGGGPTLVEVKFTRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + +L+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFETRVVRAEALTTDELRAVDAQVKTLIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AQAKAAPLPDAADLLADVYV 324 >gi|170733199|ref|YP_001765146.1| pyruvate dehydrogenase (acetyl-transferring) [Burkholderia cenocepacia MC0-3] gi|169816441|gb|ACA91024.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia cenocepacia MC0-3] Length = 327 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 187/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ ++++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L D Sbjct: 5 TQLSRDKLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTILHLGLDDY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ +GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCRGKGGSMHIADLSMGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K++++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKHKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 185 SSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVKFTRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + DL+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFETRVVRAEALTTDDLRAVDAQVKALIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AQAKAAPLPDAADLLADVYV 324 >gi|309800412|ref|ZP_07694575.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus infantis SK1302] gi|308115968|gb|EFO53481.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus infantis SK1302] Length = 322 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 125/320 (39%), Positives = 186/320 (58%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAASVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMKNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKEK-DPIENLRKYLVANNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|312602834|ref|YP_004022679.1| acetoin dehydrogenase E1 component alpha-subunit [Burkholderia rhizoxinica HKI 454] gi|312170148|emb|CBW77160.1| Acetoin dehydrogenase E1 component alpha-subunit (EC 1.2.4.-) [Burkholderia rhizoxinica HKI 454] Length = 327 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 122/319 (38%), Positives = 184/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +E L AYR M IR FEE+ + G + GF HL G+EA VG M L + D + Sbjct: 6 QLTRETLLDAYRSMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMMHLNDIDYV 65 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T +R HGH +A GVD +MAE+ GR+ G+ +GKGGSMH+ G G +GIVGA Sbjct: 66 ATTHRGHGHCIAKGVDVHGMMAEIYGRRTGVCRGKGGSMHIADLSRGMLGANGIVGAGAP 125 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A A K++++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA TS Sbjct: 126 LVCGAALAAKFKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEATS 185 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S + A N + R F +PG+ VDG D AV + +A++ R GP ++E+ RY Sbjct: 186 ASWSVAADNIADRANGFGMPGVIVDGFDFFAVYEALGEAISRARNGGGPTLVEVKLTRYY 245 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR E+ + R D ++ +R++ ++ +L+ I+ V+ +I+++V Sbjct: 246 GHFEGDAQTYREAGEVQKAREEKDCLKHFEQRVVRSELVRVDELRAIDERVKALIDDAVR 305 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ P A+L SD+ + Sbjct: 306 SAKAAPLPTEADLLSDVYV 324 >gi|322391948|ref|ZP_08065412.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus peroris ATCC 700780] gi|321145174|gb|EFX40571.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus peroris ATCC 700780] Length = 322 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 124/320 (38%), Positives = 187/320 (58%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L + D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNKDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMKNTGKIVVCLFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVQHIHERSAAYGIPGMFIPDGNNVIDVYEGFKKAVDHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE++E + DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVDEWKQK-DPIENLRKYLVENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|288905068|ref|YP_003430290.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Streptococcus gallolyticus UCN34] gi|288731794|emb|CBI13359.1| putative acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Streptococcus gallolyticus UCN34] Length = 321 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 123/319 (38%), Positives = 186/319 (58%), Gaps = 2/319 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++EQ + Y M IR F+ + +L G V G H +G+EA VG LT D + Sbjct: 3 LSQEQYIDMYLKMQRIREFDMRINKLVRRGFVQGMTHFSVGEEAASVGAMAHLTYDDIIF 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG +L Sbjct: 63 SNHRGHGQCIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTNGIVGGGYAL 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A Y+++D I V GDGA N+G +ES N+AA W L VI+ I NN+Y + + Sbjct: 123 AVGAALTQHYQKTDNIVVAFSGDGATNEGSFHESVNLAATWGLPVIFFIINNRYGISMDI 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +RA+ + R ++ IPG DG D+ AV TM KAV + R+ GP I+E+ +YR+ Sbjct: 183 TRATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVDHVRSGNGPAIVEVESYRWF 242 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS +D YR++EE+++ + DP+ + R L N AS +L I+ V K I+++ Sbjct: 243 GHSTADAGKYRSKEEVDDWKKK-DPLVKFRTYLTENHLASYDELDAIDAQVVKEIDDAYA 301 Query: 346 FAQSDKEPDPAELYSDILI 364 FAQ+ EPD + + D+ + Sbjct: 302 FAQNSPEPDLSVAFEDVWV 320 >gi|227829707|ref|YP_002831486.1| dehydrogenase E1 component [Sulfolobus islandicus L.S.2.15] gi|227456154|gb|ACP34841.1| dehydrogenase E1 component [Sulfolobus islandicus L.S.2.15] Length = 332 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 123/327 (37%), Positives = 189/327 (57%), Gaps = 8/327 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + K + L Y+ MLLIR E A +L+ +G + GF HL +G+EAV VG+ +L + D Sbjct: 2 VQDIPKSKLLDMYKKMLLIRYHELTAKELFAIGKIPGFVHLYVGEEAVAVGVMSTLRDDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A G+D +++AE+ G++ G+ KGKGGSMH+F G G +GIVG Sbjct: 62 YITSTHRGHGHCIAKGLDVKRMLAEIMGKKTGVCKGKGGSMHIFDYSKGMLGANGIVGGG 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A A K + D++ GDGA NQG V ES N++A+W L V++++E+N YAM Sbjct: 122 APHAVGAALAFKLKGLDRVAAAFIGDGAMNQGVVLESLNLSAIWKLPVVFIVEDNMYAMS 181 Query: 224 T-SVSRA------SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 T S++ A SA ++ +R + F IP ++VDGMD+ AV +AV R GP + Sbjct: 182 TRSLAPAKLQPSHSAAKSYVERALGFGIPAVEVDGMDVLAVYEVAKEAVEKARKGGGPSL 241 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 + TYR+ GH D YR +EE EM DPI R +L+ N ++ +L +I+ Sbjct: 242 LHCKTYRFFGHFEGDSLVYRDKEE-EEMWRKRDPITLFRDKLVSNDIVNQEELDKIDREA 300 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 + I +++FA+ P+ E +D+ Sbjct: 301 KTEIEQALKFAEESPYPEVEEALTDVF 327 >gi|226528639|ref|NP_001140759.1| hypothetical protein LOC100272834 [Zea mays] gi|194688554|gb|ACF78361.1| unknown [Zea mays] gi|194700954|gb|ACF84561.1| unknown [Zea mays] gi|194702308|gb|ACF85238.1| unknown [Zea mays] Length = 341 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 118/314 (37%), Positives = 179/314 (57%), Gaps = 10/314 (3%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+L R FE+ Q+Y G + GF HL GQEAV G L + D +++ YR+H H L+ Sbjct: 1 MVLGRVFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLNQADCVVSTYRDHVHALSK 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GV A +MAEL G+ G +G+GGSMHMFS + GG +G + + TG AFA KYR Sbjct: 61 GVPARSVMAELFGKATGCCRGQGGSMHMFSAPHNLLGGFAFIGEGIPVATGAAFAAKYRH 120 Query: 179 SD---------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 + + FGDG N GQ +E N+A LW L +++V+ENN +A+G S RA Sbjct: 121 EVLKESGPDGLDVTLAFFGDGTCNNGQFFECLNMAQLWKLPIVFVVENNLWAIGMSHIRA 180 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 ++ K+G +F +PG+ VDGMD+ V+ +A+ R +GP ++E TYR+RGHS+ Sbjct: 181 TSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSL 240 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 +DP R +E + D I ++K ++ A+E +LK IE + ++ +VEFA + Sbjct: 241 ADPDELRKPDEKTHYAAR-DSITALKKYIIEQNLATESELKSIEKKIDDVVEEAVEFADA 299 Query: 350 DKEPDPAELYSDIL 363 P ++L ++ Sbjct: 300 SPHPPRSQLLENVF 313 >gi|288920664|ref|ZP_06414967.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Frankia sp. EUN1f] gi|288347934|gb|EFC82208.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Frankia sp. EUN1f] Length = 355 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 111/241 (46%), Positives = 153/241 (63%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M LIRRFEE+A Q Y +GG+CHL +G+EA +VG +L D + T YREHG+ + Sbjct: 33 RQMALIRRFEERAAQGYTQARIGGYCHLNLGEEATVVGTMAALHPTDYLFTNYREHGYAI 92 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 A G+D ++MAEL GR G SKG GGSMHMF T+ GG+GIVG Q+ L TG A A Y Sbjct: 93 AKGIDPGRVMAELYGRTTGTSKGWGGSMHMFDTEARLLGGYGIVGGQLPLATGAALAVTY 152 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R D++ + GDG N G +ES N+A LWNL +++++ NN MGT+V R+SA+ Sbjct: 153 RGGDEVVLCQMGDGTTNIGAFHESLNLAVLWNLPIVFLVVNNDLGMGTTVDRSSAEPELF 212 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 KR ++ + G +VDG D+ AV A + V R P ++E ++ R +GHS+ DPA YR Sbjct: 213 KRASAYRMHGERVDGADVLAVHAATARLVERARTESRPALLEAVSKRLKGHSVVDPARYR 272 Query: 297 T 297 + Sbjct: 273 S 273 >gi|227827160|ref|YP_002828939.1| dehydrogenase E1 component [Sulfolobus islandicus M.14.25] gi|229584337|ref|YP_002842838.1| dehydrogenase E1 component [Sulfolobus islandicus M.16.27] gi|238619314|ref|YP_002914139.1| dehydrogenase E1 component [Sulfolobus islandicus M.16.4] gi|227458955|gb|ACP37641.1| dehydrogenase E1 component [Sulfolobus islandicus M.14.25] gi|228019386|gb|ACP54793.1| dehydrogenase E1 component [Sulfolobus islandicus M.16.27] gi|238380383|gb|ACR41471.1| dehydrogenase E1 component [Sulfolobus islandicus M.16.4] Length = 332 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 123/327 (37%), Positives = 189/327 (57%), Gaps = 8/327 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + K + L Y+ MLLIR E A +L+ +G + GF HL +G+EAV VG+ +L + D Sbjct: 2 VQDIPKSKLLDMYKKMLLIRYHELTAKELFAIGKIPGFVHLYVGEEAVAVGVMSTLRDDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A G+D +++AE+ G++ G+ KGKGGSMH+F G G +GIVG Sbjct: 62 YITSTHRGHGHCIAKGLDVKRMLAEIMGKKTGVCKGKGGSMHIFDYSKGMLGANGIVGGG 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A A K + D++ GDGA NQG V ES N++A+W L V++++E+N YAM Sbjct: 122 APHAVGAALAFKLKGLDRVAAAFIGDGAMNQGVVLESLNLSAIWKLPVVFIVEDNMYAMS 181 Query: 224 T-SVSRA------SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 T S++ A SA ++ +R + F IP ++VDGMD+ AV +AV R GP + Sbjct: 182 TRSLAPAKLQPSHSAAKSYVERALGFGIPAVEVDGMDVLAVYEVAKEAVDKARKGGGPSL 241 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 + TYR+ GH D YR +EE EM DPI R +L+ N ++ +L +I+ Sbjct: 242 LHCKTYRFFGHFEGDSLVYRDKEE-EEMWRKRDPITLFRDKLVSNNIVNQEELDKIDREA 300 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 + I +++FA+ P+ E +D+ Sbjct: 301 KTEIEQALKFAEESPYPEVEEALTDVF 327 >gi|227831502|ref|YP_002833282.1| Pyruvate dehydrogenase (acetyl-transferring) [Sulfolobus islandicus L.S.2.15] gi|227457950|gb|ACP36637.1| Pyruvate dehydrogenase (acetyl-transferring) [Sulfolobus islandicus L.S.2.15] Length = 345 Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 134/339 (39%), Positives = 190/339 (56%), Gaps = 15/339 (4%) Query: 35 DIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY---------GMGMVGGFCHLC 85 D+ +L E S L+ YR ML IR FEE ++Y G++ G HL Sbjct: 11 DLSYL--IESSGLKPSDLLNMYRRMLTIRYFEETIRKIYHEGKNPFNMASGIIRGEMHLS 68 Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 IGQEAV VG + + D +++ +R H H +A GVDA+K++AE+ G+ G+ +GKGG MH Sbjct: 69 IGQEAVAVGTLYKVRDEDVVVSTHRPHHHAIAKGVDANKLVAEILGKVTGLCRGKGGHMH 128 Query: 146 MFS-TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 +F TKN + GIVGA G AFA KY D + + G+GAAN G E+ NIA Sbjct: 129 LFDKTKN--FACSGIVGASFPQAAGAAFAFKYSSKDNVAIAFAGEGAANHGTFAETLNIA 186 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 + W L +I VIE+N+YA T S + T +RG+++N+P VDGMD+ V +T KA Sbjct: 187 SAWELPLILVIEDNKYADSTPKSFVMSTTFHYQRGLTYNVPSYLVDGMDVIDVYSTARKA 246 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 + R GP +IE LTYRY GH D YRT+EE+ EM S+ DPI ++ R+L +A Sbjct: 247 IERARKGFGPTLIEALTYRYVGHFEGDSEEYRTKEEV-EMWSSLDPIRRLENRILRLNYA 305 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 L ++ RK + + ++FA PDP E + + Sbjct: 306 DNEILAKLREEARKQVQDVIDFALRSPYPDPNEALTGVF 344 >gi|254248045|ref|ZP_04941366.1| Pyruvate dehydrogenase (lipoamide) [Burkholderia cenocepacia PC184] gi|124872821|gb|EAY64537.1| Pyruvate dehydrogenase (lipoamide) [Burkholderia cenocepacia PC184] Length = 327 Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 186/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L D Sbjct: 5 TQLGRDKLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTILHLGLDDY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ +GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCRGKGGSMHIADLSMGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K++++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKHKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 185 SSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVKFTRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + DL+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFETRVVRAEALTTDDLRAVDAQVKALIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AQAKAAPLPDAADLLADVYV 324 >gi|284164719|ref|YP_003402998.1| dehydrogenase E1 component [Haloterrigena turkmenica DSM 5511] gi|284014374|gb|ADB60325.1| dehydrogenase E1 component [Haloterrigena turkmenica DSM 5511] Length = 348 Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 127/316 (40%), Positives = 180/316 (56%), Gaps = 1/316 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +E A R ML IR F+ AG + G + GF HL IG+EAV VG +L D + + Sbjct: 8 TEEGRREALRRMLTIREFDSTAGDYFADGEIPGFVHLYIGEEAVGVGTCAALEPDDYIAS 67 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A G+D +MAEL G+Q G GKGGSMH+ +G G +GIVGA L Sbjct: 68 THRGHGHCIAKGLDPKLMMAELFGKQDGYCNGKGGSMHIADVDSGMLGANGIVGAGPPLA 127 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG A + Y +++ V GDGA QGQV+E+ N+AA W+L ++V+ENN Y GT V Sbjct: 128 TGAALSIDYDDREQVAVGFLGDGAVAQGQVHEAINLAATWDLPAVFVVENNHYGEGTPVE 187 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + S +++IPG+ VDGMD+ AV +++A R GP I+E TYRYRGH Sbjct: 188 EQHNVDDLSDTAGAYDIPGVTVDGMDVTAVAEAIEEARKRARDGDGPTIVEAETYRYRGH 247 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 D YR +EI + + DPI++ + L+ +E +L+E+ + I +VE+A Sbjct: 248 YEGDEEPYRDEDEIEKWK-EQDPIDRFSELLVDRGELTEEELEELRDEIETEIKEAVEYA 306 Query: 348 QSDKEPDPAELYSDIL 363 Q PDP+E Y D+ Sbjct: 307 QDAPLPDPSEAYEDMF 322 >gi|295402194|ref|ZP_06812152.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacillus thermoglucosidasius C56-YS93] gi|312111438|ref|YP_003989754.1| pyruvate dehydrogenase (acetyl-transferring) [Geobacillus sp. Y4.1MC1] gi|294975785|gb|EFG51405.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacillus thermoglucosidasius C56-YS93] gi|311216539|gb|ADP75143.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacillus sp. Y4.1MC1] Length = 330 Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 125/322 (38%), Positives = 180/322 (55%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ Y+ M IR+FE+K +++ G++ GF HL G+EAV VG+ L E Sbjct: 7 ESKSLTKEKAKWMYQKMQEIRQFEDKVHEIFSRGILPGFVHLYAGEEAVAVGVCAHLHEN 66 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HGH +A G D + +MAE+ G+ G+ KGKGGSMH+ + G G +GIVG Sbjct: 67 DYITSTHRGHGHCIAKGCDLNGMMAEIYGKATGLCKGKGGSMHIADVEKGMLGANGIVGG 126 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 L G K +++ I V FGDGA N G +E N+AA+W L V++V ENN YA Sbjct: 127 GFPLAVGAGLTAKLKKTGAIAVCFFGDGANNHGTFHEGINLAAIWKLPVVFVAENNGYAE 186 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T AS+ N + R ++NIPG VDG D+ AV ++A+ R +GP +IE TY Sbjct: 187 ATPFEYASSCKNIADRAAAYNIPGEIVDGKDVIAVYEAAERAITRARNGEGPTLIECKTY 246 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D Y++ EE + D I + R +L N+ SE +L EIE NV + I Sbjct: 247 RNYGHFEGDAQTYKSAEEKEKHLKELDAIVRFRNYILSNQLLSEQELLEIEQNVTEAIEK 306 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 +V+FA+ P +L D+ + Sbjct: 307 AVDFAEKSPFPAEEDLLKDVYV 328 >gi|229578611|ref|YP_002837009.1| dehydrogenase E1 component [Sulfolobus islandicus Y.G.57.14] gi|229582608|ref|YP_002841007.1| dehydrogenase E1 component [Sulfolobus islandicus Y.N.15.51] gi|284997306|ref|YP_003419073.1| dehydrogenase, E1 component [Sulfolobus islandicus L.D.8.5] gi|228009325|gb|ACP45087.1| dehydrogenase E1 component [Sulfolobus islandicus Y.G.57.14] gi|228013324|gb|ACP49085.1| dehydrogenase E1 component [Sulfolobus islandicus Y.N.15.51] gi|284445201|gb|ADB86703.1| dehydrogenase, E1 component [Sulfolobus islandicus L.D.8.5] Length = 332 Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 123/327 (37%), Positives = 189/327 (57%), Gaps = 8/327 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + K + L Y+ MLLIR E A +L+ +G + GF HL +G+EAV VG+ +L + D Sbjct: 2 VQDIPKSKLLDMYKKMLLIRYHELTAKELFAIGKIPGFVHLYVGEEAVAVGVMSTLRDDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A G+D +++AE+ G++ G+ KGKGGSMH+F G G +GIVG Sbjct: 62 YITSTHRGHGHCIAKGLDVKRMLAEIMGKKTGVCKGKGGSMHIFDYSKGMLGANGIVGGG 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A A K + D++ GDGA NQG V ES N++A+W L V++++E+N YAM Sbjct: 122 APHAVGAALAFKLKGLDRVAAAFIGDGAMNQGVVLESLNLSAIWKLPVVFIVEDNMYAMS 181 Query: 224 T-SVSRA------SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 T S++ A SA ++ +R + F IP ++VDGMD+ AV +AV R GP + Sbjct: 182 TRSLAPAKLQPSHSAAKSYVERALGFGIPAVEVDGMDVLAVYEVAKEAVDKARKGGGPSL 241 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 + TYR+ GH D YR +EE EM DPI R +L+ N ++ +L +I+ Sbjct: 242 LHCKTYRFFGHFEGDSLVYRDKEE-EEMWRKRDPITLFRDKLVSNDIVNQEELDKIDREA 300 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 + I +++FA+ P+ E +D+ Sbjct: 301 KTEIEQALKFAEESPYPEVEEALTDVF 327 >gi|229580451|ref|YP_002838851.1| Pyruvate dehydrogenase (acetyl-transferring) [Sulfolobus islandicus Y.G.57.14] gi|229580899|ref|YP_002839298.1| Pyruvate dehydrogenase (acetyl-transferring) [Sulfolobus islandicus Y.N.15.51] gi|284999053|ref|YP_003420821.1| Pyruvate dehydrogenase (acetyl-transferring) [Sulfolobus islandicus L.D.8.5] gi|228011167|gb|ACP46929.1| Pyruvate dehydrogenase (acetyl-transferring) [Sulfolobus islandicus Y.G.57.14] gi|228011615|gb|ACP47376.1| Pyruvate dehydrogenase (acetyl-transferring) [Sulfolobus islandicus Y.N.15.51] gi|284446949|gb|ADB88451.1| Pyruvate dehydrogenase (acetyl-transferring) [Sulfolobus islandicus L.D.8.5] Length = 345 Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 134/339 (39%), Positives = 191/339 (56%), Gaps = 15/339 (4%) Query: 35 DIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY---------GMGMVGGFCHLC 85 D+ +L E S L+ YR ML IR FEE ++Y G++ G HL Sbjct: 11 DLSYL--IESSGLKPSDLLNMYRRMLTIRYFEETIRKIYHEGKNPFNMASGIIRGEMHLS 68 Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 IGQEAV VG + + D +++ +R H H +A GVDA+K++AE+ G+ G+ +GKGG MH Sbjct: 69 IGQEAVAVGTLYKVRDEDVVVSTHRPHHHAIAKGVDANKLVAEILGKVTGLCRGKGGHMH 128 Query: 146 MFS-TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 +F TKN + GIVGA G AFA KY D + + G+GAAN G E+ NIA Sbjct: 129 LFDKTKN--FACSGIVGASFPQAAGAAFAFKYSGKDNVAIAFAGEGAANHGTFAETLNIA 186 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 + W L +I VIE+N+YA T S + T +RG+++N+P VDGMD+ V +T KA Sbjct: 187 SAWELPLILVIEDNKYADSTPKSFVMSTTFHYQRGLTYNVPSYLVDGMDVIDVYSTARKA 246 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 + R GP +IE LTYRY GH D YRT+EE+ EM S+ DPI ++ R+L +A Sbjct: 247 IERARKGFGPTLIEALTYRYVGHFEGDSEEYRTKEEV-EMWSSLDPIRRLENRILRLNYA 305 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 L ++ RK + ++++FA PDP E + + Sbjct: 306 DNEILAKLREEARKQVQDAIDFALRSPYPDPNEALTGVF 344 >gi|229544154|ref|ZP_04433213.1| Pyruvate dehydrogenase (acetyl-transferring) [Bacillus coagulans 36D1] gi|229325293|gb|EEN90969.1| Pyruvate dehydrogenase (acetyl-transferring) [Bacillus coagulans 36D1] Length = 330 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 121/319 (37%), Positives = 178/319 (55%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + KE+ + M IR+FE+K +++ G++ GF HL G+EAV VG+ L + D + Sbjct: 10 QLTKEKAQWMLQKMFEIRKFEDKVHEVFATGILPGFVHLYAGEEAVAVGVCAHLNDQDMI 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 TSTHRGHGHCIAKGCDLKGMMAEIYGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 129 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A K +++ + V FGDGA N G +E N+AA+W L VI+V ENN Y T Sbjct: 130 LACGAALTAKVKKTSNVSVCFFGDGANNHGTFHEGINLAAVWKLPVIFVAENNGYGEATP 189 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + R V+++IPG++VDG DI AV +AV R +GP +IE +TYR Sbjct: 190 FHYASSCKTIADRAVAYDIPGVRVDGKDIVAVYQAAKEAVERARNGEGPSLIECVTYRNY 249 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D Y+ E + + D I Q +K +L SE D+ +E V + I +V+ Sbjct: 250 GHFEGDAQTYKAEAEKAKQLNEKDAIVQFKKFVLEQNLFSEADINSLEQKVEQEIEEAVK 309 Query: 346 FAQSDKEPDPAELYSDILI 364 F++ PDP+EL D+ + Sbjct: 310 FSEESPYPDPSELLKDVYV 328 >gi|322385526|ref|ZP_08059170.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus cristatus ATCC 51100] gi|321270264|gb|EFX53180.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus cristatus ATCC 51100] Length = 322 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 187/320 (58%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MATLDKSLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYNGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE++E + DPIE +R LL N ASE +L+ I+ +V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVDEWKKK-DPIENLRNYLLENDIASEEELEAIQASVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|78066609|ref|YP_369378.1| pyruvate dehydrogenase (lipoamide) [Burkholderia sp. 383] gi|77967354|gb|ABB08734.1| Pyruvate dehydrogenase (lipoamide) [Burkholderia sp. 383] Length = 327 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 186/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ ++++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L D Sbjct: 5 TQLSRDKLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTILHLGLDDY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCHGKGGSMHIADLAMGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K++++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKHKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 185 SSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVKFTRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + DL+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFETRVVRAEALTTADLRAVDAQVKALIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AQAKAAPVPDAADLLTDVYV 324 >gi|170701497|ref|ZP_02892450.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia ambifaria IOP40-10] gi|170133585|gb|EDT01960.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia ambifaria IOP40-10] Length = 327 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 120/320 (37%), Positives = 188/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ ++++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L D Sbjct: 5 TQLSRDKLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLGLEDY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCHGKGGSMHIADLSMGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K++++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKHKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + S + A N + R F +PG+ VDG D AV + +AVA R+ GP ++E+ RY Sbjct: 185 ASSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVARARSGGGPTLVEVKFTRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + +L+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFETRVVRAEALTTDELRAVDAQVKTLIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AQAKAAPLPDAADLLADVYV 324 >gi|329769143|ref|ZP_08260564.1| hypothetical protein HMPREF0433_00328 [Gemella sanguinis M325] gi|328839489|gb|EGF89066.1| hypothetical protein HMPREF0433_00328 [Gemella sanguinis M325] Length = 326 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 120/317 (37%), Positives = 190/317 (59%), Gaps = 2/317 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K++ L Y LM LIR F+ + +LY G+V G H +G+EA VG L + D M Sbjct: 7 DLTKQEHLEMYELMQLIRDFDMELSKLYSRGLVHGMTHYSVGEEAANVGAIYPLRKEDLM 66 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG +A G++ ++MAE+ G++ G KG+GGSMH++ + G G +GIVG Sbjct: 67 YSNHRGHGQTIAKGIEIDRMMAEILGKETGQCKGRGGSMHVYDLEQGNMGCNGIVGGGHG 126 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L TG A A K +++ + + C GDGA N+G +E N+A+ W+L +I+ + NN+Y + + Sbjct: 127 LSTGAALAQKMKKTGNVVICCMGDGATNEGSFHECLNMASNWDLPLIFYVINNKYGISMA 186 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 R + ++R S+ I G+ V DG D+ AV M +A+ + R+ KGP+++E ++YR+ Sbjct: 187 QERCMRVKDITERAASYRIKGIHVEDGNDVLAVYDAMQEAIDHARSGKGPVLVEAVSYRW 246 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS SD YR+REE+ E + DP + R LL N A+E +LKEIE + I+++V Sbjct: 247 FGHSASDAGKYRSREEVAEWKLK-DPNVKYRNYLLENGIATEAELKEIEDRSKATIDDAV 305 Query: 345 EFAQSDKEPDPAELYSD 361 EFA+ K D + + D Sbjct: 306 EFAKESKVADGSIAFQD 322 >gi|325978046|ref|YP_004287762.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177974|emb|CBZ48018.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 335 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 125/328 (38%), Positives = 190/328 (57%), Gaps = 3/328 (0%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 +LEG + ++EQ + Y M IR F+ + +L G V G H +G+EA VG Sbjct: 9 YLEG-NMMNLSQEQYIDMYLKMQRIREFDMRINKLVRRGFVQGMTHFSVGEEAASVGAMA 67 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 LT D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG + Sbjct: 68 HLTYDDIIFSNHRGHGQCIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTN 127 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GIVG +L G A Y+++D I V GDGA N+G +ES N+AA W L VI+ I N Sbjct: 128 GIVGGGYALAVGAALTQHYQKTDNIVVAFSGDGATNEGSFHESVNLAATWGLPVIFFIIN 187 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPII 276 N+Y + ++RA+ + R ++ IPG DG D+ AV TM KAV + R+ GP I Sbjct: 188 NRYGISMDITRATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVDHVRSGNGPAI 247 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +E+ +YR+ GHS +D YR++ E+++ + DP+ + R L N AS +L I+ V Sbjct: 248 VEVESYRWFGHSTADAGKYRSKGEVDDWKKK-DPLVKFRTYLTENHLASHDELDAIDAQV 306 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDILI 364 K I+++ FAQ+ EPD + + D+ + Sbjct: 307 VKEIDDAYAFAQNSPEPDLSVAFEDVWV 334 >gi|206560275|ref|YP_002231039.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Burkholderia cenocepacia J2315] gi|198036316|emb|CAR52212.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Burkholderia cenocepacia J2315] Length = 342 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L D Sbjct: 20 TQLSRDTLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLGLDDY 79 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ G G +GIVGA Sbjct: 80 VATTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCHGKGGSMHIADLSMGMLGANGIVGAGG 139 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K++++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 140 PLVCGAALAAKHKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 199 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 200 SSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVKFTRY 259 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + DL+ ++ V+ +I+++V Sbjct: 260 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFETRVVRAEALTTDDLRAVDAQVKALIDDAV 319 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 320 AQAKAAPLPDAADLLADVYV 339 >gi|163849200|ref|YP_001637244.1| pyruvate dehydrogenase [Chloroflexus aurantiacus J-10-fl] gi|222527177|ref|YP_002571648.1| pyruvate dehydrogenase [Chloroflexus sp. Y-400-fl] gi|163670489|gb|ABY36855.1| Pyruvate dehydrogenase (acetyl-transferring) [Chloroflexus aurantiacus J-10-fl] gi|222451056|gb|ACM55322.1| Pyruvate dehydrogenase (acetyl-transferring) [Chloroflexus sp. Y-400-fl] Length = 338 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 123/319 (38%), Positives = 177/319 (55%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + ++E+ L AY M LIR FE++ + G + GF HL G+EAV VG+ L + D + Sbjct: 2 DISREKLLWAYERMRLIREFEDRLHTDFAAGKIPGFVHLYAGEEAVAVGLCAHLRDDDFI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GVD +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHCIAKGVDLRAMMAEIYGKATGACKGKGGSMHIADVDKGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G K + +D++ V FGDGA+NQG +E N+A +W L V++V ENN YA TS Sbjct: 122 LACGAGLTAKIKGTDQVTVCFFGDGASNQGTTFEGLNLAGIWKLPVVFVCENNGYAETTS 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + + + R F +P + +DG+D AV +AVA R +GP IE TYRY Sbjct: 182 PRYSVSGQDIAARARGFGMPSIAIDGLDFFAVYEAAGEAVARARRGEGPTFIEAQTYRYY 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YRTR+E RS D + + R+ + + +L EI+ R + ++V Sbjct: 242 GHFEGDSIRYRTRDEEAHYRSL-DCLHRFRQTVTAQGLLTAAELDEIDARARAAVEDAVR 300 Query: 346 FAQSDKEPDPAELYSDILI 364 FA PDPAEL +D+ + Sbjct: 301 FAAESPLPDPAELLTDVYV 319 >gi|89899201|ref|YP_521672.1| pyruvate dehydrogenase (lipoamide) [Rhodoferax ferrireducens T118] gi|89343938|gb|ABD68141.1| Pyruvate dehydrogenase (lipoamide) [Rhodoferax ferrireducens T118] Length = 334 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 115/272 (42%), Positives = 165/272 (60%), Gaps = 1/272 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++K LS ML IRR EE+A +LYG + GF HL IG+EAV G +L+ D+++ Sbjct: 13 WDKPFALSLLSDMLRIRRMEERAAELYGQQKIRGFLHLYIGEEAVAAGALRALSADDKVV 72 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YREHGH L G+ IMAE+ GRQ G S+G+GGSMH+F + F+GG IVG + L Sbjct: 73 ATYREHGHALLHGLKMDTIMAEMFGRQDGCSRGRGGSMHLFDRAHHFFGGQAIVGGGLPL 132 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 TG+A A+K + + FG+GA +G +E+ N+AALW L V++ ENN YAMGT++ Sbjct: 133 ATGLALADKLLKRRALTACFFGEGAVAEGAFHEAMNLAALWRLPVLFCCENNLYAMGTAL 192 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +R+ +QT+ + S+ + M VDGMD+ AV + A R P+ +E+ TYR+R Sbjct: 193 ARSESQTDLCLKAASYGMEVMTVDGMDVVAVHEAVRFAAQKVREASAPMFVELRTYRFRA 252 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 HSM DP YR ++EI ++ P+ RL Sbjct: 253 HSMFDPDLYRAKQEIEAWKTR-GPVHTFTARL 283 >gi|322389584|ref|ZP_08063133.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus parasanguinis ATCC 903] gi|321143710|gb|EFX39139.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus parasanguinis ATCC 903] Length = 323 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 187/320 (58%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L + D Sbjct: 2 MATLDKSLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNDDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 62 LLTSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 122 MGIAVGAALTQQMKKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 181 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 182 ADIKKMTNIQHIHERSAAYGIPGMFIPDGNNVIDVYEGFQKAVEHVRSGKGPVLIESVTY 241 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK LL N+ AS +L +I+ V++ + Sbjct: 242 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLLENEIASAEELDKIQEEVKEAVEA 300 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 301 SVKFAEESPFPPLESAFEDI 320 >gi|319947066|ref|ZP_08021300.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus australis ATCC 700641] gi|319747114|gb|EFV99373.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus australis ATCC 700641] Length = 322 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 186/320 (58%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L + D Sbjct: 1 MATLDKSLLLDMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNDDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + ++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMHKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIPDGNNVIDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK LL N+ AS +L +I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLLENEIASAEELDQIQEEVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|134295870|ref|YP_001119605.1| pyruvate dehydrogenase [Burkholderia vietnamiensis G4] gi|134139027|gb|ABO54770.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia vietnamiensis G4] Length = 327 Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 186/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L D Sbjct: 5 TQLSRDTLLDAYRLMRTIREFEERLHVEFSTGEIPGFVHLYAGEEASAVGTMLHLGLEDY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCHGKGGSMHIADLAMGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K++++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKHKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S S + A N + R F +PG+ VDG D AV + +AVA R GP ++E+ RY Sbjct: 185 SASWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVARARNGGGPTLVEVKFTRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + +L+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFETRVVRAEVLTTDELRAVDAQVKALIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AQAKAAPLPDAADLLADVYV 324 >gi|323476706|gb|ADX81944.1| dehydrogenase E1 component [Sulfolobus islandicus HVE10/4] Length = 332 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 123/327 (37%), Positives = 188/327 (57%), Gaps = 8/327 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + K + L Y+ MLLIR E A +L+ G + GF HL +G+EAV VG+ +L + D Sbjct: 2 VQDIPKSKLLDMYKKMLLIRYHELTAKELFATGKIPGFVHLYVGEEAVAVGVMSTLRDDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A G+D +++AE+ G++ G+ KGKGGSMH+F G G +GIVG Sbjct: 62 YITSTHRGHGHCIAKGLDVKRMLAEIMGKKTGVCKGKGGSMHIFDYSKGMLGANGIVGGG 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A A K + D+I V GDGA NQG V ES N++A+W L V++++E+N YAM Sbjct: 122 APHAVGAALAFKLKGLDRIAVAFIGDGAMNQGVVLESLNLSAIWKLPVVFIVEDNMYAMS 181 Query: 224 T-SVSRA------SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 S++ A SA ++ +R + F +P ++VDGMD+ AV +AV R GP + Sbjct: 182 IRSLAPAKLQPSHSAAKSYVERALGFGVPAVEVDGMDVLAVYEVAKEAVDRARKGGGPSL 241 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 + TYR+ GH D YR +EE EM DPI R +L+ N ++ +L +I+ Sbjct: 242 LHCKTYRFFGHFEGDSLVYRDKEE-EEMWKKRDPITLFRDKLVSNNIINQEELDKIDREA 300 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 + I +++FA+ P+ E +D+ Sbjct: 301 KTEIEQALKFAEESPYPEVEEALTDVF 327 >gi|107028982|ref|YP_626077.1| pyruvate dehydrogenase (lipoamide) [Burkholderia cenocepacia AU 1054] gi|116689860|ref|YP_835483.1| pyruvate dehydrogenase (acetyl-transferring) [Burkholderia cenocepacia HI2424] gi|105898146|gb|ABF81104.1| Pyruvate dehydrogenase (lipoamide) [Burkholderia cenocepacia AU 1054] gi|116647949|gb|ABK08590.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia cenocepacia HI2424] Length = 327 Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L D Sbjct: 5 TQLGRDKLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTILHLGLDDY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCHGKGGSMHIADLSMGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K++++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKHKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 185 SSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVKFTRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + DL+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFEARVVRAEALTTDDLRAVDAQVKALIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AQAKAAPLPDAADLLADVYV 324 >gi|323475847|gb|ADX86453.1| Pyruvate dehydrogenase (acetyl-transferring) [Sulfolobus islandicus REY15A] gi|323478579|gb|ADX83817.1| Pyruvate dehydrogenase (acetyl-transferring) [Sulfolobus islandicus HVE10/4] Length = 345 Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 132/338 (39%), Positives = 187/338 (55%), Gaps = 13/338 (3%) Query: 35 DIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY---------GMGMVGGFCHLC 85 D+ +L E S L+ YR ML IR FEE ++Y G++ G HL Sbjct: 11 DLSYL--IESSGLKPSDLLNMYRRMLTIRYFEETIRKIYHEGKNPFNMASGIIRGEMHLS 68 Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 IGQEAV VG + + D +++ +R H H +A GVDA+K+ AE+ G+ G+ +GKGG MH Sbjct: 69 IGQEAVAVGTLYKVRDEDVVVSTHRPHHHAIAKGVDANKLAAEILGKVTGLCRGKGGHMH 128 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 +F F GIVGA G AFA KY D + + G+GAAN G E+ NIA+ Sbjct: 129 LFDKTKKF-ACSGIVGASFPQAAGAAFAFKYSGKDNVAIAFAGEGAANHGTFAETLNIAS 187 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 W L +I VIE+N+YA T S + T +RG+++N+P VDGMD+ V +T KA+ Sbjct: 188 AWELPLILVIEDNKYADSTPKSFVMSTTFHYQRGLTYNVPSYLVDGMDVIDVYSTARKAI 247 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 R GP +IE LTYRY GH D YRT+EE+ EM S+ DPI ++ R+L +A Sbjct: 248 ERARKGFGPTLIEALTYRYVGHFEGDSEEYRTKEEV-EMWSSLDPIRRLENRILRLNYAD 306 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 L ++ RK + ++++FA PDP E + + Sbjct: 307 NEILAKLREEARKQVQDAIDFALRSPYPDPNEALTGVF 344 >gi|322372933|ref|ZP_08047469.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. C150] gi|321277975|gb|EFX55044.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. C150] Length = 323 Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 187/320 (58%), Gaps = 1/320 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +KE L + M IR F+ + +L G V G H +G+EA VG L+ D Sbjct: 3 KLSKETHLEMFTKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVQHLSYDDIF 62 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG + Sbjct: 63 FSNHRGHGQSIAQDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGGYA 122 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A +Y+ + I V GDGA N+G +ES N+A+ W L VI+ I NN+Y + Sbjct: 123 LAVGAALTQQYKETGNIVVAFSGDGATNEGSFHESVNMASAWKLPVIFFIINNRYGISMD 182 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + RA+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ +YR+ Sbjct: 183 IHRATNTPHLYTRAEAYGIPGFYCQDGNDVMAVYETMGKAVEHVRGGNGPAIVEVESYRW 242 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS +D YRT+EE++E ++++DPI + R L+ K AS+ +L I+ V+ I+ + Sbjct: 243 FGHSTADAGVYRTKEEVDEWKNHNDPIIKYRNYLVSEKIASDEELDAIQSQVKAQIDAAY 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 EFAQ+ +P+ + + D+ + Sbjct: 303 EFAQNSPDPELSIAFEDVWV 322 >gi|148242805|ref|YP_001227962.1| pyruvate dehydrogenase E1 component alpha subunit [Synechococcus sp. RCC307] gi|147851115|emb|CAK28609.1| Pyruvate dehydrogenase E1 component alpha subunit [Synechococcus sp. RCC307] Length = 346 Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 124/321 (38%), Positives = 194/321 (60%), Gaps = 9/321 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG-MKMSLTEGDQ 104 + +E+ L+ YR M+L RRFE+K ++Y G + GF HL GQEAV G +K T+ D Sbjct: 19 DLTREEALTIYRDMVLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSSGVIKAMKTQHDW 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG+ +G + Sbjct: 79 FCSTYRDHVHALSAGVPAREVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGYAFIGEGI 138 Query: 165 SLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + G AF ++Y+R S+ + FGDG N GQ YE N+A LW L +++V+EN Sbjct: 139 PVALGAAFTSRYKRDALGDSSSNAVTAAFFGDGTCNIGQFYECLNMAQLWKLPILFVVEN 198 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G + RA++ T ++ F + G +VDGMD+ AV+ +AVA RA +GP ++ Sbjct: 199 NKWAIGMAHERATSDTEIWRKAAGFGMHGEEVDGMDVLAVRDAAQRAVARARAGEGPTLL 258 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E +TYR+RGHS++DP R EE + DPI+ + + S +++ I+ + Sbjct: 259 ECMTYRFRGHSLADPDELRDPEE-KAFWAERDPIKGFQATMHARGLLSAEEMEAIDKEID 317 Query: 338 KIINNSVEFAQSDKEPDPAEL 358 + +VEFA + EPD +EL Sbjct: 318 AEVREAVEFALAAPEPDASEL 338 >gi|312862970|ref|ZP_07723210.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus vestibularis F0396] gi|311101830|gb|EFQ60033.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus vestibularis F0396] Length = 323 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 120/320 (37%), Positives = 186/320 (58%), Gaps = 1/320 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +KE L + M IR F+ + +L G V G H +G+EA VG L+ D Sbjct: 3 KLSKETHLEMFTKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVQHLSYDDIF 62 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG + Sbjct: 63 FSNHRGHGQSIAQDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGGYA 122 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A +Y+ + I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 123 LAVGAALTQQYKETGNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGISMD 182 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + +A+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ +YR+ Sbjct: 183 IHKATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYDTMGKAVDHVRGGNGPAIVEVESYRW 242 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS +D YRT+EE++E ++N+DPI + R L+ AS +L I+ V+ ++++ Sbjct: 243 FGHSTADAGVYRTKEEVDEWKNNNDPIIKYRDYLVSENIASAEELDAIQSQVKTEVDSAY 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 EFAQ+ +P+ + + D+ + Sbjct: 303 EFAQNSPDPELSVAFEDVWV 322 >gi|307704802|ref|ZP_07641697.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis SK597] gi|307621631|gb|EFO00673.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis SK597] Length = 322 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 124/320 (38%), Positives = 186/320 (58%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R V++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSVAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|269836263|ref|YP_003318491.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphaerobacter thermophilus DSM 20745] gi|269785526|gb|ACZ37669.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphaerobacter thermophilus DSM 20745] Length = 324 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 131/320 (40%), Positives = 184/320 (57%), Gaps = 2/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 SE E+ L YR ML +RRFEE++ +LY G++GG H+ IGQEAV VG+ +L D Sbjct: 3 SETRAERLLDFYRRMLQLRRFEERSIELYQQGLMGGSLHVGIGQEAVAVGVCAALRPDDY 62 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 M YR LA G D + MAEL GR+ G +GKGG MH+ + + G G + IVGA V Sbjct: 63 MTNTYRGRPQFLAKGADPGRTMAELLGRRDGYCRGKGGPMHVTAVELGCLGANAIVGAGV 122 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + G A + K + SD++ V FG+GA NQG +E+ N+AA+W V+ V+ENNQYA T Sbjct: 123 PIAVGAALSAKMQGSDRVAVTFFGEGATNQGAWHEAMNLAAVWQAPVVLVLENNQYAEMT 182 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + R + R ++ IP + VDGMD+ AV A AVA R+ GP +IE TYR+ Sbjct: 183 PIRRTVRIERLADRATAYGIPAVIVDGMDVEAVHAAAVVAVARARSGGGPTLIEAQTYRF 242 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +GH + D YRTREE+ E + DP+ R++L+ +E L E V + I +V Sbjct: 243 KGHMIGDSEVYRTREEVTEWMA-RDPLRLSRQKLIELG-VAEDALDRAEREVERWIEEAV 300 Query: 345 EFAQSDKEPDPAELYSDILI 364 FA + EP + D+ + Sbjct: 301 AFALASPEPTVESAFEDVWV 320 >gi|171317865|ref|ZP_02907042.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia ambifaria MEX-5] gi|171096934|gb|EDT41804.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia ambifaria MEX-5] Length = 327 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 119/320 (37%), Positives = 187/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L D Sbjct: 5 TQLSRDTLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLGLEDY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCHGKGGSMHIADLSMGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A +++++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAARHKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + S + A N + R F +PG+ VDG D AV + +AVA R+ GP ++E+ RY Sbjct: 185 ASSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVARARSGGGPTLVEVKFTRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + +L+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFETRVVRAEALTTDELRAVDAQVKTLIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AQAKAAPLPDAADLLADVYV 324 >gi|152990680|ref|YP_001356402.1| pyruvate/2-oxoglutarate dehydrogenase complex, E1 component, alpha subunit [Nitratiruptor sp. SB155-2] gi|151422541|dbj|BAF70045.1| pyruvate/2-oxoglutarate dehydrogenase complex, E1 component, alpha subunit [Nitratiruptor sp. SB155-2] Length = 323 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 129/307 (42%), Positives = 174/307 (56%), Gaps = 3/307 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y LM L R FE A Q Y G + GF HL IGQEA VG + +GD + T YREH Sbjct: 10 YYLMKLGREFEIAAKQEYMKGNIAGFLHLDIGQEACSVGSMQAFDKGD-VFTHYREHVLA 68 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G+D +MAEL G+ GISKGKGGSMH+F + FYGG IV + + TG A+A K Sbjct: 69 IARGMDPKVVMAELFGKVTGISKGKGGSMHLFDPRLSFYGGDAIVAGHLPIATGCAYARK 128 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + FGDGA+N G +ES NIA+ W L +I+ ENN YA+GT + S Sbjct: 129 IEGENAGVFAIFGDGASNAGAFFESINIASAWKLPIIFFCENNYYAIGTRIGWVSPFEEL 188 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + ++ +P ++DGMD+ V + +A Y GP IE TYRY GHSMSD Y Sbjct: 189 FNKAKNY-MPAKRIDGMDVCEVYKAVTEAKEYLENGLGPYFIEAETYRYEGHSMSDNGKY 247 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R+ EE+ E+ + DPIE+++K + E E + V + I ++EFA + EPD Sbjct: 248 RSEEEM-EIFKSRDPIEKLKKEAIALGIVEESYFDETDKRVEQEIAEAIEFAANSPEPDL 306 Query: 356 AELYSDI 362 +ELY D+ Sbjct: 307 SELYEDV 313 >gi|294338888|emb|CAZ87225.1| Acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit (Acetoin:DCPIP oxidoreductase-alpha) (AO:DCPIP OR) [Thiomonas sp. 3As] Length = 327 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 121/317 (38%), Positives = 181/317 (57%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++EQ L AYR M IR FE++ +G G + GF HL G+EA G+ M L +GD++ + Sbjct: 9 SREQLLQAYRTMRTIREFEDRLHVDFGRGDIPGFVHLYAGEEAAATGVMMHLGDGDRIAS 68 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A GVD +M E+ G+QGG GKGGSMH+ G G +GIVGA L Sbjct: 69 THRGHGHCIAKGVDVMAMMKEIYGKQGGACNGKGGSMHIADLDKGMMGANGIVGAGAPLA 128 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A A K+R ++ V GDGA+NQG ES N+AA+WNL V++V+ENN YA TS Sbjct: 129 CGAALAAKFRGKSEVAVSFVGDGASNQGTFLESLNLAAVWNLPVVFVVENNGYAETTSRD 188 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 A ++ R F +PG+ VDG D AV + + + R GP ++E R+ GH Sbjct: 189 YGVAVDSYVDRAAGFGLPGVTVDGTDFFAVHESAGEIIHRARTGGGPALLECKMVRFFGH 248 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 D YR E++++R+N D +++ L+ ++E +LK ++ + +I SV A Sbjct: 249 FEGDAQTYRGPGELDDIRANQDCLKKFSAALISGGVSTEEELKAMDREIAALIERSVAEA 308 Query: 348 QSDKEPDPAELYSDILI 364 ++ P A+L +D+ + Sbjct: 309 KAAPLPTLADLTTDVYV 325 >gi|229585977|ref|YP_002844479.1| Pyruvate dehydrogenase (acetyl-transferring) [Sulfolobus islandicus M.16.27] gi|228021027|gb|ACP56434.1| Pyruvate dehydrogenase (acetyl-transferring) [Sulfolobus islandicus M.16.27] Length = 345 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 132/338 (39%), Positives = 187/338 (55%), Gaps = 13/338 (3%) Query: 35 DIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY---------GMGMVGGFCHLC 85 D+ +L E S L+ YR ML IR FEE ++Y G++ G HL Sbjct: 11 DLSYL--IESSGLKPSDLLNMYRRMLTIRYFEETIRKIYHEGKNPFNMASGIIRGEMHLS 68 Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 IGQEAV VG + + D +++ +R H H +A GVDA+K+ AE+ G+ G+ +GKGG MH Sbjct: 69 IGQEAVAVGTLYKVRDEDVVVSTHRPHHHAIAKGVDANKLAAEILGKVTGLCRGKGGHMH 128 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 +F F GIVGA G AFA KY D + + G+GAAN G E+ NIA+ Sbjct: 129 LFDKTKKF-ACSGIVGASFPQAAGAAFAFKYSGKDNVAIAFAGEGAANHGTFAETLNIAS 187 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 W L +I VIE+N+YA T S + T +RG+++N+P VDGMD+ V +T KA+ Sbjct: 188 AWELPLILVIEDNKYADSTPKSLVMSTTFHYQRGLTYNVPSYLVDGMDVIDVYSTARKAI 247 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 R GP +IE LTYRY GH D YRT+EE+ EM S+ DPI ++ R+L +A Sbjct: 248 ERARKGFGPTLIEPLTYRYVGHFEGDSEEYRTKEEV-EMWSSLDPIRRLENRILRLNYAD 306 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 L ++ RK + ++++FA PDP E + + Sbjct: 307 NEILAKLREEARKQVQDAMDFALRSPYPDPNEALTGVF 344 >gi|237835399|ref|XP_002366997.1| pyruvate dehydrogenase, putative [Toxoplasma gondii ME49] gi|211964661|gb|EEA99856.1| pyruvate dehydrogenase, putative [Toxoplasma gondii ME49] Length = 635 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 119/306 (38%), Positives = 180/306 (58%), Gaps = 11/306 (3%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 ML R E+ +LY MG GF HL GQEAV G+ L D +++ YR+H H + Sbjct: 265 MLTGRMVEDACARLYYMGKTAGFVHLYTGQEAVSAGVIKLLRPDDAVVSTYRDHVHATSK 324 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GV ++MAEL G+ G S+G+GGSMHMFS K+ GG +G Q+ + G AF+ YRR Sbjct: 325 GVPVREVMAELFGKATGCSRGRGGSMHMFSKKHNMIGGFAFIGEQIPVALGYAFSAAYRR 384 Query: 179 ----------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 +D++ V GDG N GQ+YE+ NIAAL L +++V+ENN +A+G + R Sbjct: 385 FAMGDKSDSNADQVAVCFLGDGTTNMGQLYEALNIAALSKLPIVFVVENNNWAIGMAAQR 444 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++A +R SF + G++VDGMD+ AV+ +A+ R +GP +IE LTYR+RGHS Sbjct: 445 STATPAVWQRAESFGVAGVEVDGMDVLAVRGAARRAIDRARRGEGPTLIEALTYRFRGHS 504 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++DP R ++ E DPI+ + L +AS+ + V+ +++++V+FA+ Sbjct: 505 VADPDEMRAVKQ-KEAWVVRDPIKSFEEELKRLGYASDETIAATRAKVKAVVDDAVKFAE 563 Query: 349 SDKEPD 354 + EPD Sbjct: 564 TSPEPD 569 >gi|116627820|ref|YP_820439.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus thermophilus LMD-9] gi|116101097|gb|ABJ66243.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Streptococcus thermophilus LMD-9] gi|312278381|gb|ADQ63038.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Streptococcus thermophilus ND03] Length = 323 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 185/320 (57%), Gaps = 1/320 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +KE L + M IR F+ + +L G V G H +G+EA VG L+ D Sbjct: 3 KLSKETHLEMFTKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVQHLSYDDIF 62 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG + Sbjct: 63 FSNHRGHGQSIAQDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGGYA 122 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A +Y+ + I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 123 LAVGAALTQQYKETGNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGISMD 182 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + RA+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ +YR+ Sbjct: 183 IRRATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYDTMGKAVDHVRGGNGPAIVEVESYRW 242 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS +D YRT+EE++E ++N+DPI + R L+ AS +L I+ V+ ++ + Sbjct: 243 FGHSTADAGVYRTKEEVDEWKNNNDPIIRYRDYLVSENIASVEELDAIQSQVKAQVDAAY 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 EFAQ+ +P+ + + D+ + Sbjct: 303 EFAQNSPDPELSVAFEDVWV 322 >gi|221485474|gb|EEE23755.1| pyruvate dehydrogenase, putative [Toxoplasma gondii GT1] Length = 635 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 119/306 (38%), Positives = 180/306 (58%), Gaps = 11/306 (3%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 ML R E+ +LY MG GF HL GQEAV G+ L D +++ YR+H H + Sbjct: 265 MLTGRMVEDACARLYYMGKTAGFVHLYTGQEAVSAGVIKLLRPDDAVVSTYRDHVHATSK 324 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GV ++MAEL G+ G S+G+GGSMHMFS K+ GG +G Q+ + G AF+ YRR Sbjct: 325 GVPVREVMAELFGKATGCSRGRGGSMHMFSKKHNMIGGFAFIGEQIPVALGYAFSAAYRR 384 Query: 179 ----------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 +D++ V GDG N GQ+YE+ NIAAL L +++V+ENN +A+G + R Sbjct: 385 FAMGDKSDSNADQVAVCFLGDGTTNMGQLYEALNIAALSKLPIVFVVENNNWAIGMAAQR 444 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++A +R SF + G++VDGMD+ AV+ +A+ R +GP +IE LTYR+RGHS Sbjct: 445 STATPAVWQRAESFGVAGVEVDGMDVLAVRGAARRAIDRARRGEGPTLIEALTYRFRGHS 504 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++DP R ++ E DPI+ + L +AS+ + V+ +++++V+FA+ Sbjct: 505 VADPDEMRAVKQ-KEAWVVRDPIKSFEEELKRLGYASDETIAATRAKVKAVVDDAVKFAE 563 Query: 349 SDKEPD 354 + EPD Sbjct: 564 TSPEPD 569 >gi|148240070|ref|YP_001225457.1| pyruvate dehydrogenase E1 component alpha subunit [Synechococcus sp. WH 7803] gi|147848609|emb|CAK24160.1| Pyruvate dehydrogenase E1 component alpha subunit [Synechococcus sp. WH 7803] Length = 364 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 122/314 (38%), Positives = 190/314 (60%), Gaps = 9/314 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYRE 111 L YR M L RRFE+K ++Y G + GF HL GQEAV G+ ++ + D + YR+ Sbjct: 44 LELYRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIGAMKRQHDWFCSTYRD 103 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG +G + + G A Sbjct: 104 HVHALSAGVPAREVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGFAFIGEGIPVALGAA 163 Query: 172 FANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 F ++Y+R S+ + FGDG N GQ +E N+A LW L +++V+ENN++A+G Sbjct: 164 FTSRYKRDALGDSSSNAVTAAFFGDGTCNNGQFFECLNMAQLWKLPILFVVENNKWAIGM 223 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + RA++ ++ +F + G +VDGMD+ AV+A +AV RA +GP ++E LTYR+ Sbjct: 224 AHDRATSDPEIWRKAGAFGMAGEEVDGMDVLAVRAAAQRAVERARAGEGPTVLECLTYRF 283 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHS++DP R EE + + DP++ + + LL S +L+ IE + + + V Sbjct: 284 RGHSLADPDELRAEEE-KQFWAKRDPLKALERDLLAANLVSADELRAIEKEIDAEVQDCV 342 Query: 345 EFAQSDKEPDPAEL 358 +FA + EPD +EL Sbjct: 343 DFALNAPEPDGSEL 356 >gi|222153241|ref|YP_002562418.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus uberis 0140J] gi|222114054|emb|CAR42432.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus uberis 0140J] Length = 322 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 121/318 (38%), Positives = 188/318 (59%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +KEQ L + M IR F+ + +L G V G H +G+EA VG LT D + + Sbjct: 5 SKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLTYDDIIFS 64 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG +L Sbjct: 65 NHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGGYALA 124 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + +++ Sbjct: 125 VGAALTQQYKETNNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGISMNIN 184 Query: 228 RASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A+ + R ++ IPG DG D+ AV TMD+AV + R GP I+E+ +YR+ G Sbjct: 185 NATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMDQAVKHVRGGNGPAIVEVESYRWFG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS +D YRT+EE++ ++ DPI + R+ L A+E +L I+ V K I+++ E+ Sbjct: 245 HSTADAGKYRTKEEVDSWKAK-DPIVKYRQYLTKEGIATEEELDAIQAQVVKEIDDAYEY 303 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ +P+ + + D+ + Sbjct: 304 AQNSPDPELSVAFEDVWV 321 >gi|157375312|ref|YP_001473912.1| pyruvate dehydrogenase (acetyl-transferring) [Shewanella sediminis HAW-EB3] gi|157317686|gb|ABV36784.1| Pyruvate dehydrogenase (acetyl-transferring) [Shewanella sediminis HAW-EB3] Length = 331 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 123/310 (39%), Positives = 185/310 (59%), Gaps = 1/310 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 ++ R ML IRRFEEK QLY + GF HL IG+EA+ VG+ L DQ++ YREH Sbjct: 13 INQLRQMLRIRRFEEKCTQLYAEEKIRGFLHLYIGEEAIAVGVMSVLKPEDQIVATYREH 72 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH LA G+ I+AE+ GR G S+G+GGSMH+F + FYGG+ IV + L G+A Sbjct: 73 GHALARGLSMGSILAEMFGRINGCSRGRGGSMHLFDKQMNFYGGNAIVAGGLPLAAGLAM 132 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 ANK + D + V FG+GA +G+ +E+ N+A LW L V++V ENN YAMGT++S + ++ Sbjct: 133 ANKKQHRDAVTVCFFGEGAVAEGEFHEAMNLAVLWKLPVLFVCENNGYAMGTALSLSESE 192 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 TN +++ + + QVDGM++ V++ A+ + P +E TYR+RGHS D Sbjct: 193 TNLARKASGYGMASSQVDGMNVVDVESATSSALELIKTTSQPYFLECKTYRFRGHSSFDG 252 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR +EEI + P+ +++ L N +E +L E+E ++ I ++EFA+ Sbjct: 253 QLYREKEEIRQWEEK-GPVIRLQNWLKENNHFNEEELDELESEIKAEIEAAIEFAEGGAW 311 Query: 353 PDPAELYSDI 362 D +L D+ Sbjct: 312 EDTRDLCKDV 321 >gi|312199275|ref|YP_004019336.1| pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EuI1c] gi|311230611|gb|ADP83466.1| Pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EuI1c] Length = 346 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 130/331 (39%), Positives = 188/331 (56%), Gaps = 7/331 (2%) Query: 37 PFLEGFEVSEF--NKEQELSAYRLMLLIRRFEEKAGQLYGMGM-VGGFCHLCIGQEAVIV 93 P F S F + E++L A R ML IRRFEE A + G + G H+CIGQEA IV Sbjct: 4 PPASRFTSSRFTTSSERDLEALRRMLRIRRFEESAMDIVRKGQGIAGSVHICIGQEATIV 63 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G ++L + D M+ +R HGH +A G +MAEL GR G+ GKGGSMH+ G Sbjct: 64 GSCLALRDDDYMVGYHRSHGHPIAKGAPLGPLMAELMGRSTGVCHGKGGSMHLADFGVGS 123 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 G IVGA + G A++ + R +D+ + FGDGAAN G +E N+AA W L V++ Sbjct: 124 LGETAIVGAGIPQAVGAAYSARVRGTDQTALAFFGDGAANIGSFHEGLNLAAAWRLGVVF 183 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 V ENN YAM T+++ A + + R ++ +PG+ VDG D+ AV + AV R G Sbjct: 184 VCENNLYAMSTALADTMASDSIADRAAAYRMPGVIVDGQDLAAVYDVVSDAVERGRGGGG 243 Query: 274 PIIIEMLTYRYRGHSM--SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 P ++E TYRYR H+ + ++R +E+ ++ DP+E +R RLL ++ +E DL Sbjct: 244 PTLVEARTYRYRDHAEYGNMDLSHRPADEVEHWKAR-DPVELLRARLL-SEGVAETDLAA 301 Query: 332 IEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 I V + I +V FA+ +P P EL+ D+ Sbjct: 302 IAETVAEEIRAAVAFAKQSPQPAPEELFDDL 332 >gi|241888514|ref|ZP_04775822.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Gemella haemolysans ATCC 10379] gi|241864781|gb|EER69155.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Gemella haemolysans ATCC 10379] Length = 326 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 120/317 (37%), Positives = 189/317 (59%), Gaps = 2/317 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K++ L Y LM LIR F+ + +LY G+V G H +G+EA VG L + D M Sbjct: 7 DLTKQEHLEMYELMQLIRDFDMELSKLYSRGLVHGMTHYSVGEEAANVGAIYPLRKEDLM 66 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG +A G++ ++MAE+ G++ G KG+GGSMH++ ++G G +GIVG Sbjct: 67 FSNHRGHGQTIAKGIEIDRMMAEILGKETGQCKGRGGSMHIYDLEHGNMGCNGIVGGGHG 126 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L TG A A K +++ I + C GDGA N+G +E N+A+ W+L +I+ + NN+Y + + Sbjct: 127 LSTGAALAQKMKKTGNIVICCMGDGATNEGSFHECLNMASNWDLPLIFYVINNKYGISMA 186 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 R ++R S+ I G+ V DG D+ AV M +A+ + R+ KGP+++E ++YR+ Sbjct: 187 QERCMRVKEITERAASYRIKGIHVPDGNDVLAVYDAMQEAIEHTRSGKGPVLVEAVSYRW 246 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS SD YR+REE+ E + DP + + LL N A+E +LKEIE + I+++V Sbjct: 247 FGHSASDAGKYRSREEVAEWKLK-DPNVKYKNYLLENGIATEEELKEIEDRSKATIDDAV 305 Query: 345 EFAQSDKEPDPAELYSD 361 EFA+ D A + D Sbjct: 306 EFAKESPFADVAIAFQD 322 >gi|228477405|ref|ZP_04062041.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus salivarius SK126] gi|228250840|gb|EEK10028.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus salivarius SK126] Length = 323 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 120/320 (37%), Positives = 185/320 (57%), Gaps = 1/320 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +KE L + M IR F+ + +L G V G H +G+EA VG L+ D Sbjct: 3 KLSKETHLEMFTKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVQHLSYDDIF 62 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG + Sbjct: 63 FSNHRGHGQSIAQDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGGYA 122 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A +Y+ + I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 123 LAVGAALTQQYKETGNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGISMD 182 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + +A+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ +YR+ Sbjct: 183 IHKATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVEHVRGGNGPAIVEVESYRW 242 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS +D YRT+EE++E ++N+DPI + R L+ AS +L I+ V+ ++ + Sbjct: 243 FGHSTADAGVYRTKEEVDEWKNNNDPIIKYRDYLVAENIASAEELDAIQSQVKAEVDAAY 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 EFAQ+ +P+ + + D+ + Sbjct: 303 EFAQNSPDPELSVAFEDVWV 322 >gi|228478232|ref|ZP_04062840.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus salivarius SK126] gi|228249911|gb|EEK09181.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus salivarius SK126] Length = 357 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 119/320 (37%), Positives = 181/320 (56%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V +KE+ S Y+ M IR FEE A + +G + GF HL G+EA+ G+ +LT+ D Sbjct: 36 VENVSKEEAKSMYKTMCDIRNFEENARHFFSIGQIPGFVHLYSGEEAIATGVCANLTDKD 95 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A G D K+MAE+ G+ G+ KGKGGSMH+ G G +G+VG Sbjct: 96 YITSTHRGHGHCVAKGGDLKKMMAEIFGKSTGLGKGKGGSMHIADLDKGILGANGMVGGG 155 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 L TG A NKY ++D + V FGDGAAN+G +E N+A++WNL V++V ENN +A Sbjct: 156 FGLATGAAMRNKYLKTDDVAVCFFGDGAANEGNFHECLNMASIWNLPVVFVNENNLFAES 215 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T +S ++R ++N+PG++V+G D+ AV +A+ R GP +IE +TYR Sbjct: 216 TPQWYSSGSPTIAERAQAYNMPGVRVNGKDLFAVYQVAKEAIERARRGDGPTLIEAITYR 275 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GH D Y+ + I + ++ D +E R + S+ +L EI +K + ++ Sbjct: 276 NHGHFEGDEQKYKAPDGIEKEWADVDALEVFRDLVTEKGILSQDELDEIVAQSQKDVEDA 335 Query: 344 VEFAQSDKEPDPAELYSDIL 363 + FAQ P LY D+ Sbjct: 336 IHFAQESPIPKEEALYEDVF 355 >gi|322411983|gb|EFY02891.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 326 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 121/318 (38%), Positives = 187/318 (58%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +KEQ L + M IR F+ + +L G V G H +G+EA VG LT D + + Sbjct: 9 SKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLTYDDIIFS 68 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG +L Sbjct: 69 NHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGGYALA 128 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + S++ Sbjct: 129 VGAALTQQYKGTNNIAVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGISMSIN 188 Query: 228 RASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ +YR+ G Sbjct: 189 NATNTPHLYTRAEAYGIPGFYCEDGNDLMAVYETMGKAVEHVRGGNGPAIVEVESYRWFG 248 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS +D YRT+EE++E + DP+ + R L A++ +L I+ V+K ++++ EF Sbjct: 249 HSTADAGKYRTKEEVDEWKEK-DPMIKYRTYLTSEGIATDDELDAIQAQVKKEVDDAYEF 307 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ +P+ + + D+ + Sbjct: 308 AQNSPDPELSVAFEDVWV 325 >gi|296876497|ref|ZP_06900548.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus parasanguinis ATCC 15912] gi|296432490|gb|EFH18286.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus parasanguinis ATCC 15912] Length = 323 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 186/320 (58%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L + D Sbjct: 2 MATLDKSLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNDDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 62 LLTSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++W L VI+ NN Y + Sbjct: 122 MGIAVGAALTQQMKKTGKIVVCFFGDGATNEGVFHEAVNMASIWKLPVIFYCINNGYGIS 181 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 182 ADIKKMTNIQHIHERSAAYGIPGMFIPDGNNVIDVYEGFQKAVEHVRSGKGPVLIESVTY 241 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK LL N+ AS +L +I+ V++ + Sbjct: 242 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLLKNEIASAEELDQIQEEVKEAVEA 300 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 301 SVKFAEESPFPPLESAFEDI 320 >gi|269123973|ref|YP_003306550.1| Pyruvate dehydrogenase (acetyl-transferring) [Streptobacillus moniliformis DSM 12112] gi|268315299|gb|ACZ01673.1| Pyruvate dehydrogenase (acetyl-transferring) [Streptobacillus moniliformis DSM 12112] Length = 322 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 120/320 (37%), Positives = 185/320 (57%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + KEQ L ++ M R F+ K QL G V G H +G+EA VG +L + D Sbjct: 1 MEKLTKEQLLDMFKKMQEARIFDLKVAQLVKKGKVPGMTHFSVGEEAASVGAIAALNDDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R H ++A G+D + +MAE+ G+ GI KGKGGSMH+ +G G +GIVG Sbjct: 61 IITSNHRGHAQVIAKGIDLNAMMAEILGKYTGICKGKGGSMHIADVDSGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G A + +++ KI V FGDGA N+G +E+ N+A++W L VI+ NN Y + Sbjct: 121 HGISVGAALTQQMKKTGKIVVCFFGDGATNEGSFHEALNMASIWKLPVIFYSINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + R S+ IPGM + DG ++ V KAV Y R GP++IE +TY Sbjct: 181 ADIKKMTNIEHIHLRSASYGIPGMFILDGNNVLDVYEEFKKAVDYVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRT+EE+ E DP+E +RK L+ N A+E +L +I+ +V+K +++ Sbjct: 241 RWLGHSSSDPGKYRTKEEV-ETWKKKDPVENLRKYLIENNIATEQELLDIDASVKKAVDD 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 +V FA++ P + DI Sbjct: 300 AVVFAENSPLPPLESAFEDI 319 >gi|92399529|gb|ABE76506.1| apicoplast pyruvate dehydrogenase E1 alpha subunit [Toxoplasma gondii] Length = 635 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 119/306 (38%), Positives = 180/306 (58%), Gaps = 11/306 (3%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 ML R E+ +LY MG GF HL GQEAV G+ L D +++ YR+H H + Sbjct: 265 MLTGRMVEDACARLYYMGKTAGFVHLYTGQEAVSAGVIKLLRPDDAVVSTYRDHVHATSK 324 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GV ++MAEL G+ G S+G+GGSMHMFS K+ GG +G Q+ + G AF+ YRR Sbjct: 325 GVPVREVMAELFGKATGCSRGRGGSMHMFSKKHNMIGGFAFIGEQIPVALGYAFSAAYRR 384 Query: 179 ----------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 +D++ V GDG N GQ+YE+ NIAAL L +++V+ENN +A+G + R Sbjct: 385 FAMGDKSDSNADQVAVCFLGDGTTNMGQLYEALNIAALSKLPIVFVVENNNWAIGMAAQR 444 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++A +R SF + G++VDGMD+ AV+ +A+ R +GP +IE LTYR+RGHS Sbjct: 445 STATPAVWQRADSFGVAGVEVDGMDVLAVRGAARRAIDRARRGEGPTLIEALTYRFRGHS 504 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++DP R ++ E DPI+ + L +AS+ + V+ +++++V+FA+ Sbjct: 505 VADPDEMRAVKQ-KEAWVVRDPIKSFEEELKRLGYASDETIAATRAKVKAVVDDAVKFAE 563 Query: 349 SDKEPD 354 + EPD Sbjct: 564 TSPEPD 569 >gi|296134938|ref|YP_003642180.1| Pyruvate dehydrogenase (acetyl-transferring) [Thiomonas intermedia K12] gi|295795060|gb|ADG29850.1| Pyruvate dehydrogenase (acetyl-transferring) [Thiomonas intermedia K12] Length = 350 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 130/331 (39%), Positives = 183/331 (55%), Gaps = 24/331 (7%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 N++ L R ML RR EE+ Q Y G +GGF HL G+EAV VG+ + GD ++ Sbjct: 1 MNRDLHLHFLRDMLRARRLEERLAQEYAKGNIGGFLHLYPGEEAVAVGVLTAAEPGDYVV 60 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YREH H LA GV I+AEL GR+ G S G GGSMH+ + F GG+ IVG + Sbjct: 61 STYREHVHALARGVPMRAIVAELFGRRTGCSGGLGGSMHLSDAQRRFLGGYAIVGETYPI 120 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A+A + R + + FGDGA NQG +ES N+AALW L V++V ENN Y +GT + Sbjct: 121 AIGAAYAVQLRGLPEAVICFFGDGAVNQGTFHESLNMAALWKLPVLFVCENNHYQIGTEI 180 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R SA T KR ++ IP ++ +GM+ V +A RA +GP ++E+ TYRYRG Sbjct: 181 HRHSAITEVYKRACAYGIPALRANGMEAEGVHGHASAMLAQIRAGQGPQLLELETYRYRG 240 Query: 287 HSMSDPANYRTREEI----------NEMRS--NHDPIEQVRKRLLHNKWASEGD------ 328 HSM+DP +YR E+ E+R H P + + + L + A+ GD Sbjct: 241 HSMADPGSYRPAVEVAAYTAQDPIGAELRELKAHCPDDALLQSLGLDSCAALGDRYVRSG 300 Query: 329 ------LKEIEMNVRKIINNSVEFAQSDKEP 353 L ++E +R I+++V FA + EP Sbjct: 301 HLDTAGLDKLEAEIRAEIDDAVAFAIASAEP 331 >gi|294338920|emb|CAZ87260.1| putative Pyruvate dehydrogenase E1 component subunit alpha PdhA [Thiomonas sp. 3As] Length = 350 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 130/331 (39%), Positives = 183/331 (55%), Gaps = 24/331 (7%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 N++ L R ML RR EE+ Q Y G +GGF HL G+EAV VG+ + GD ++ Sbjct: 1 MNRDLHLHFLRDMLRARRLEERLAQEYAKGNIGGFLHLYPGEEAVAVGVLTAAEPGDYVV 60 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YREH H LA GV I+AEL GR+ G S G GGSMH+ + F GG+ IVG + Sbjct: 61 STYREHVHALARGVPMRAIVAELFGRRTGCSGGLGGSMHLSDAQRRFLGGYAIVGETYPI 120 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A+A + R + + FGDGA NQG +ES N+AALW L V++V ENN Y +GT + Sbjct: 121 AIGAAYAVQLRGLPEAVICFFGDGAVNQGTFHESLNMAALWKLPVLFVCENNHYQIGTEI 180 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R SA T KR ++ IP ++ +GM+ V +A RA +GP ++E+ TYRYRG Sbjct: 181 HRHSAITEVYKRACAYGIPALRANGMEAEGVHGHASAMLAQIRAGQGPQLLELETYRYRG 240 Query: 287 HSMSDPANYRTREEI----------NEMRS--NHDPIEQVRKRLLHNKWASEGD------ 328 HSM+DP +YR E+ E+R H P + + + L + A+ GD Sbjct: 241 HSMADPGSYRPAVEVAAYTAQDPIGAELRELKAHCPDDALLQSLGLDSCAALGDRYVRSG 300 Query: 329 ------LKEIEMNVRKIINNSVEFAQSDKEP 353 L ++E +R I+++V FA + EP Sbjct: 301 HLDTAGLDKLEAEIRAEIDDAVAFAIASAEP 331 >gi|325961518|ref|YP_004239424.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component subunit alpha [Arthrobacter phenanthrenivorans Sphe3] gi|323467605|gb|ADX71290.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Arthrobacter phenanthrenivorans Sphe3] Length = 332 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 117/299 (39%), Positives = 173/299 (57%), Gaps = 2/299 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 ML +RR EEK +LY + GF H+ IG++AV G+ +L GD ++ YREHGH L Sbjct: 23 MLRVRRLEEKCVELYTEAKIRGFLHVYIGEKAVAAGVLDTLEPGDAVVATYREHGHALLQ 82 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GV A+ I+AE+ G G +G+GGSMH+F F+GG+ IV + L G+A A+K Sbjct: 83 GVPAAAILAEMYGNVQGCCRGRGGSMHLFDAGTRFFGGNAIVAGGLPLAVGLALADKMAG 142 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ V FG+GA +G+ +ES N+AALW L V++ ENN YAMGT++ R+ +QT+ + + Sbjct: 143 RARVTVCFFGEGAVAEGEFHESLNLAALWQLPVLFCCENNLYAMGTALGRSESQTDIALK 202 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 + + VDGMD+ AV +AV R+ GP +E+ TYR+R HSM DP YR + Sbjct: 203 AAGYELAAWAVDGMDVLAVHEAARRAVDAVRSGAGPHFLELRTYRFRAHSMFDPERYREK 262 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 E+ DPI +R+ L E E++ + +VEFA++ P+P E Sbjct: 263 SEVARWLER-DPITLLRRALEDAGQLDEARWLELQKEADDEVAGAVEFAEAGT-PEPVE 319 >gi|209559340|ref|YP_002285812.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes NZ131] gi|209540541|gb|ACI61117.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes NZ131] Length = 326 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 122/323 (37%), Positives = 189/323 (58%), Gaps = 2/323 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E+ +KEQ L + M IR F+ + +L G V G H +G+EA VG L+ Sbjct: 4 EMVTVSKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLSYD 63 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 64 DIIFSNHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGG 123 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 +L G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 124 GYALAVGAALTQQYKGTNNIAVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGI 183 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 S++ A+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ + Sbjct: 184 SMSINNATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYETMGKAVEHVRGGNGPAIVEVES 243 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR+ GHS +D YRT+EE++E + DP+ + R L A++ +L I+ V+K I+ Sbjct: 244 YRWFGHSTADAGKYRTKEEVDEWKEK-DPMIKYRTYLTSEGIATDDELDAIQAQVKKEID 302 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 ++ EFAQ+ +P+ + + D+ + Sbjct: 303 DAYEFAQNSPDPELSVAFEDVWV 325 >gi|251782656|ref|YP_002996959.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391286|dbj|BAH81745.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127471|gb|ADX24768.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 326 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 121/318 (38%), Positives = 187/318 (58%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +KEQ L + M IR F+ + +L G V G H +G+EA VG LT D + + Sbjct: 9 SKEQYLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLTYDDIIFS 68 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG +L Sbjct: 69 NHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGGYALA 128 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + S++ Sbjct: 129 VGAALTQQYKGTNNIAVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGISMSIN 188 Query: 228 RASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ +YR+ G Sbjct: 189 NATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYETMGKAVEHVRGGNGPAIVEVESYRWFG 248 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS +D YRT+EE++E + DP+ + R L A++ +L I+ V+K ++++ EF Sbjct: 249 HSTADAGKYRTKEEVDEWKEK-DPMIKYRTYLTSEGIATDDELDAIQAQVKKEVDDAYEF 307 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ +P+ + + D+ + Sbjct: 308 AQNSPDPELSVAFEDVWV 325 >gi|269122360|ref|YP_003310537.1| pyruvate dehydrogenase (acetyl-transferring) [Sebaldella termitidis ATCC 33386] gi|268616238|gb|ACZ10606.1| Pyruvate dehydrogenase (acetyl-transferring) [Sebaldella termitidis ATCC 33386] Length = 320 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 124/314 (39%), Positives = 179/314 (57%), Gaps = 1/314 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE Y+ M R FE+K + GMV G HL +G+EA V M+L +GD + + Sbjct: 5 KETYREMYKRMNEARAFEQKVSWFFSRGMVHGTTHLSMGEEASGVAPCMALEDGDLITST 64 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R H ++ GVD +K+MAEL G+ G KGKGGSMH+ +G G +G+VG L Sbjct: 65 HRGHSQVIGKGVDLNKMMAELLGKATGYCKGKGGSMHIADIDSGNLGANGVVGGGHGLSV 124 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G A + +++ KI + FGDGAAN+G +E+ N+A++W L VI+ ENN Y M S+ R Sbjct: 125 GAALTQQMKKTGKIVLCFFGDGAANEGSFHEALNLASIWKLPVIFYCENNLYGMSMSMER 184 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 TN + R S+ IPG VDG D + M + Y R GP+++E TYR+ GHS Sbjct: 185 HMNITNIADRASSYGIPGHIVDGNDAVGLYDKMLEIFKYVREGNGPVLVESKTYRWLGHS 244 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 SD YRT+EEI + +S DPIE+++K L+ K E +L IE + I +VEFA Sbjct: 245 KSDANVYRTKEEIEDWKSK-DPIERMKKYLVSEKIFKEAELTAIEEQAKADIEKAVEFAN 303 Query: 349 SDKEPDPAELYSDI 362 + +P+ +D+ Sbjct: 304 NSPDPELETALTDV 317 >gi|322376555|ref|ZP_08051048.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. M334] gi|321282362|gb|EFX59369.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. M334] Length = 322 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 185/320 (57%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQHTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLIENTIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|156153079|gb|ABU54773.1| pyruvate dehydrogenase E1 alpha [Blastocystis hominis] Length = 399 Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 137/327 (41%), Positives = 189/327 (57%), Gaps = 18/327 (5%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L R M+ +RR E ++ LY M + GF HL G+EA VG+ + D IT+YR H Sbjct: 50 LRIARNMVTMRRMEIESDPLYVMRKIRGFLHLYDGEEACAVGINEVIKPHDDWITSYRCH 109 Query: 113 G-HILACGVDASKIMA---ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 G L CG + + + A EL G G + GKGGSMHM+ + F+GG GIV AQ +GT Sbjct: 110 GVEFLRCGANETGVKAVINELLGHSTGAAHGKGGSMHMYEPEQNFFGGSGIVAAQTPVGT 169 Query: 169 GIAFANKY------RRSDK------ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 G+AFA +Y R +K ICV FGDGA+NQGQV+ES N+A LW+L I+VIE Sbjct: 170 GLAFAEQYLYNLNNRDKEKPEGEMNICVTMFGDGASNQGQVWESANMAKLWHLPQIFVIE 229 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQY MGTS R+S+ T + G +IPG+Q DG ++ AV+ + + C KGPI Sbjct: 230 NNQYGMGTSTERSSSSTQYYMMG-KHHIPGIQADGNNVFAVREAVRRCRELCATGKGPIF 288 Query: 277 IEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +E+ TYRY GHSMSDP YRTR+EI +R D + + L++N E K+ + Sbjct: 289 LELKTYRYHGHSMSDPGITYRTRDEIQNVRQTRDSVNYIGHILVNNGIMDEKGWKDFQTE 348 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 ++K + V + PD + L +D+ Sbjct: 349 IKKEVKGWVNDCLKEPFPDDSALMTDV 375 >gi|221198109|ref|ZP_03571155.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Burkholderia multivorans CGD2M] gi|221208400|ref|ZP_03581403.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Burkholderia multivorans CGD2] gi|221171813|gb|EEE04257.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Burkholderia multivorans CGD2] gi|221182041|gb|EEE14442.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Burkholderia multivorans CGD2M] Length = 327 Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 120/320 (37%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L D Sbjct: 5 TQLSRDTLLEAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLGVADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGKKTGVCHGKGGSMHIADLSMGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K +++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKQKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 185 SSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVKFSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + +L+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFESRVVRAEVLTTDELRAVDAQVKALIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AEAKAAPLPDAADLLTDVYV 324 >gi|28896104|ref|NP_802454.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Streptococcus pyogenes SSI-1] gi|50914122|ref|YP_060094.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS10394] gi|71903395|ref|YP_280198.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS6180] gi|94988496|ref|YP_596597.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS9429] gi|94990378|ref|YP_598478.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS10270] gi|94992321|ref|YP_600420.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS2096] gi|94994299|ref|YP_602397.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS10750] gi|306827458|ref|ZP_07460742.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus pyogenes ATCC 10782] gi|28811354|dbj|BAC64287.1| putative acetoin dehydrogenase (TPP-dependent) alpha chain [Streptococcus pyogenes SSI-1] gi|50903196|gb|AAT86911.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS10394] gi|71802490|gb|AAX71843.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS6180] gi|94542004|gb|ABF32053.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS9429] gi|94543886|gb|ABF33934.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS10270] gi|94545829|gb|ABF35876.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS2096] gi|94547807|gb|ABF37853.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS10750] gi|304430338|gb|EFM33363.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus pyogenes ATCC 10782] Length = 326 Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 121/323 (37%), Positives = 189/323 (58%), Gaps = 2/323 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E+ +KEQ L + M IR F+ + +L G V G H +G+EA VG L+ Sbjct: 4 EMVTVSKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLSYD 63 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 64 DIIFSNHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGG 123 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 +L G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 124 GYALAVGAALTQQYKGTNNIAVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGI 183 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 S++ A+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ + Sbjct: 184 SMSINNATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYETMGKAVEHVRGGNGPAIVEVES 243 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR+ GHS +D YRT+EE++E + DP+ + R L A++ +L I+ V+K ++ Sbjct: 244 YRWFGHSTADAGKYRTKEEVDEWKEK-DPMIKYRTYLTSEGIATDDELDAIQAQVKKEVD 302 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 ++ EFAQ+ +P+ + + D+ + Sbjct: 303 DAYEFAQNSPDPELSVAFEDVWV 325 >gi|330810064|ref|YP_004354526.1| pyruvate dehydrogenase (acetyl-transferring), (acetoin:26-dichlorophenolindophenol oxidoreductase), subunit alpha [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378172|gb|AEA69522.1| Pyruvate dehydrogenase (acetyl-transferring), (Acetoin:26-dichlorophenolindophenol oxidoreductase), subunit alpha [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 325 Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 120/320 (37%), Positives = 182/320 (56%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + +Q L AY++M IR FEE+ + G + GF HL G+EA G+ L + D Sbjct: 3 TPLTHDQLLHAYQVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLGDDDC 62 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A GVD +MAE+ G++ G+ +GKGGSMH+ + G G +GIVGA Sbjct: 63 IASNHRGHGHCIAKGVDVYGMMAEIYGKKTGVCQGKGGSMHIADFEKGMLGANGIVGAGA 122 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A + + +D + VV FGDG +N+G V+E+ N+A++WNL +++ ENN YA T Sbjct: 123 PLVVGAALAARLKGTDSVAVVFFGDGGSNEGAVFEAMNMASVWNLPCLFIAENNGYAEAT 182 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + + A + + R F +PG+ VDG D AV AV RA +GP +IE+ RY Sbjct: 183 ASNWSVACDHIADRAAGFGMPGVTVDGFDFFAVHEAAGAAVERARAGEGPSLIEVKLTRY 242 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR +E+ R N D + Q R+R + L +I+ V +I N+V Sbjct: 243 YGHFEGDAQTYRAPDEVKHFRENQDCLMQFRERTTRAGLLTVEQLDQIDKEVDMLIENAV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 A+SD +P A+L +D+ + Sbjct: 303 NKAKSDPKPTAADLLTDVYV 322 >gi|221215152|ref|ZP_03588119.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Burkholderia multivorans CGD1] gi|221165088|gb|EED97567.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Burkholderia multivorans CGD1] Length = 327 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 120/320 (37%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L D Sbjct: 5 TQLSRDTLLEAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLGVADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGKKTGVCHGKGGSMHIADLSMGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K +++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKQKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPTIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 185 SSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVKFSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + +L+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFEARVVRAEVLTTDELRAVDAQVKALIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AEAKAAPLPDAADLLTDVYV 324 >gi|161524607|ref|YP_001579619.1| dehydrogenase E1 component [Burkholderia multivorans ATCC 17616] gi|189350637|ref|YP_001946265.1| pyruvate dehydrogenase E1 component subunit alpha [Burkholderia multivorans ATCC 17616] gi|160342036|gb|ABX15122.1| dehydrogenase E1 component [Burkholderia multivorans ATCC 17616] gi|189334659|dbj|BAG43729.1| pyruvate dehydrogenase E1 component alpha subunit [Burkholderia multivorans ATCC 17616] Length = 327 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 120/320 (37%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L D Sbjct: 5 TQLSRDTLLEAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLGVADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGKKTGVCHGKGGSMHIADLSMGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K +++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKQKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 185 SSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVKFSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + +L+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFEARVVRAEVLTTDELRAVDAQVKALIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AEAKAAPLPDAADLLTDVYV 324 >gi|315613183|ref|ZP_07888093.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis ATCC 49296] gi|315314745|gb|EFU62787.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis ATCC 49296] Length = 322 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 184/320 (57%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQHTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|19746010|ref|NP_607146.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Streptococcus pyogenes MGAS8232] gi|21910197|ref|NP_664465.1| putative acetoin dehydrogenase (TPP-dependent) alpha chain [Streptococcus pyogenes MGAS315] gi|139473844|ref|YP_001128560.1| pyruvate dehydrogenase E1 component,alpha subunit [Streptococcus pyogenes str. Manfredo] gi|19748174|gb|AAL97645.1| putative acetoin dehydrogenase (TPP-dependent) alpha chain [Streptococcus pyogenes MGAS8232] gi|21904391|gb|AAM79268.1| putative acetoin dehydrogenase (TPP-dependent) alpha chain [Streptococcus pyogenes MGAS315] gi|134272091|emb|CAM30335.1| putative pyruvate dehydrogenase E1 component,alpha subunit [Streptococcus pyogenes str. Manfredo] Length = 322 Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 120/318 (37%), Positives = 187/318 (58%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +KEQ L + M IR F+ + +L G V G H +G+EA VG L+ D + + Sbjct: 5 SKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLSYDDIIFS 64 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG +L Sbjct: 65 NHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGGYALA 124 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + S++ Sbjct: 125 VGAALTQQYKGTNNIAVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGISMSIN 184 Query: 228 RASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ +YR+ G Sbjct: 185 NATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYETMGKAVEHVRGGNGPAIVEVESYRWFG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS +D YRT+EE++E + DP+ + R L A++ +L I+ V+K ++++ EF Sbjct: 245 HSTADAGKYRTKEEVDEWKEK-DPMIKYRTYLTSEGIATDDELDAIQAQVKKEVDDAYEF 303 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ +P+ + + D+ + Sbjct: 304 AQNSPDPELSVAFEDVWV 321 >gi|55821076|ref|YP_139518.1| acetoin dehydrogenase complex, E1 component subunit alpha [Streptococcus thermophilus LMG 18311] gi|55823002|ref|YP_141443.1| acetoin dehydrogenase complex, E1 component subunit alpha [Streptococcus thermophilus CNRZ1066] gi|55737061|gb|AAV60703.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus thermophilus LMG 18311] gi|55738987|gb|AAV62628.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus thermophilus CNRZ1066] Length = 323 Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 120/320 (37%), Positives = 185/320 (57%), Gaps = 1/320 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +KE L + M IR F+ + +L G V G H +G+EA VG L+ D Sbjct: 3 KLSKETHLEMFTKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVQHLSYDDIF 62 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG + Sbjct: 63 FSNHRGHGQSIAQDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGGYA 122 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A +Y+ + I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 123 LAVGAALTQQYKETGNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGISMD 182 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + RA+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ +YR+ Sbjct: 183 IRRATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYDTMGKAVDHVRGGNGPAIVEVESYRW 242 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS +D YRT+EE++E ++N+DPI + R L+ AS +L I+ V+ ++ + Sbjct: 243 FGHSTADAGVYRTKEEVDEWKNNNDPIIRYRDYLVSENIASVEELDAIQSQVKAQVDAAY 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 EFA++ +P+ + + D+ + Sbjct: 303 EFAKNSPDPELSVAFEDVWV 322 >gi|269118671|ref|YP_003306848.1| pyruvate dehydrogenase (acetyl-transferring) [Sebaldella termitidis ATCC 33386] gi|268612549|gb|ACZ06917.1| Pyruvate dehydrogenase (acetyl-transferring) [Sebaldella termitidis ATCC 33386] Length = 320 Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 122/307 (39%), Positives = 177/307 (57%), Gaps = 1/307 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M R FE+K + GMV G HL +G+EA V M+L +GD + + +R H + Sbjct: 12 YKRMNEARAFEQKVSWFFSRGMVHGTTHLSMGEEASGVAPCMALEDGDLITSTHRGHSQV 71 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + GVD +K+MAEL G+ G KGKGGSMH+ +G G +G+VG L G A + Sbjct: 72 IGKGVDLNKMMAELLGKATGYCKGKGGSMHIADIDSGNLGANGVVGGGHGLSVGAALTQQ 131 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +++ KI + FGDGAAN+G +E+ N+A++W L VI+ ENN Y M S+ R TN Sbjct: 132 MKKTGKIVLCFFGDGAANEGSFHEALNLASIWKLPVIFYCENNLYGMSMSMERHMNITNI 191 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + R S+ IPG VDG D + M + Y R GP+++E TYR+ GHS SD Y Sbjct: 192 ADRASSYGIPGHIVDGNDAVGLYDKMLEIFKYVREGNGPVLVESKTYRWLGHSKSDANVY 251 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RT+EEI + +S DPIE+++K L+ K E +L IE + I +VEFA + +P+ Sbjct: 252 RTKEEIEDWKSK-DPIERMKKYLVSEKIFKEAELTAIEEQAKADIEKAVEFANNSPDPEL 310 Query: 356 AELYSDI 362 +D+ Sbjct: 311 ETALTDV 317 >gi|225870730|ref|YP_002746677.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus equi subsp. equi 4047] gi|225700134|emb|CAW94258.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus equi subsp. equi 4047] Length = 322 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 120/318 (37%), Positives = 187/318 (58%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +KEQ L + M IR F+ + +L G V G H +G+EA VG LT D + + Sbjct: 5 SKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLTYDDIIFS 64 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG +L Sbjct: 65 NHRGHGQSIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTNGIVGGGYALA 124 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + S++ Sbjct: 125 VGAALTQQYKGTNNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGISMSIN 184 Query: 228 RASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A+ + R ++ IPG DG D+ AV TM KAV + R GP ++E+ +YR+ G Sbjct: 185 NATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYETMSKAVEHVRGGNGPAVVEVESYRWFG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS +D YRT+EE++E + DP+ + R L A++ +L ++ V++ I+++ EF Sbjct: 245 HSTADAGKYRTKEEVDEWKEK-DPMLKYRAYLTGEGIATDEELDALQAQVKQEIDDAYEF 303 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ +PD + + D+ + Sbjct: 304 AQNSPDPDISVAFEDVWV 321 >gi|315222968|ref|ZP_07864847.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus anginosus F0211] gi|315187918|gb|EFU21654.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus anginosus F0211] Length = 322 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 183/320 (57%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAASVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEIMGKYNGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + KI V FGDGA N+G +E+ N+A++W L VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMHHTGKIVVCFFGDGATNEGVFHEAVNMASIWKLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNIEHIHERSAAYGIPGMFIPDGNNVIEVYEGFQKAVKHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK LL N+ AS +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYLLANQIASNEELEAIQAEVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|331266357|ref|YP_004325987.1| acetoin dehydrogenase, E1 component, alpha subunit, TPP-dependent [Streptococcus oralis Uo5] gi|326683029|emb|CBZ00646.1| acetoin dehydrogenase, E1 component, alpha subunit, TPP-dependent [Streptococcus oralis Uo5] Length = 322 Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 184/320 (57%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLVENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|15675025|ref|NP_269199.1| putative acetoin dehydrogenase (TPP-dependent) subunit alpha [Streptococcus pyogenes M1 GAS] gi|71910564|ref|YP_282114.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pyogenes MGAS5005] gi|13622175|gb|AAK33920.1| putative acetoin dehydrogenase (TPP-dependent) alpha chain [Streptococcus pyogenes M1 GAS] gi|71853346|gb|AAZ51369.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS5005] Length = 322 Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 119/318 (37%), Positives = 187/318 (58%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +KEQ L + M IR F+ + +L G V G H +G+EA VG L+ D + + Sbjct: 5 SKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLSYDDIIFS 64 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG +L Sbjct: 65 NHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGGYALA 124 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + S++ Sbjct: 125 VGAALTQQYKGTNNIAVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGISMSIN 184 Query: 228 RASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A+ + R ++ +PG DG D+ AV TM KAV + R GP I+E+ +YR+ G Sbjct: 185 NATNTPHLYTRAEAYGVPGFYCEDGNDVMAVYETMGKAVEHVRGGNGPAIVEVESYRWFG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS +D YRT+EE++E + DP+ + R L A++ +L I+ V+K ++++ EF Sbjct: 245 HSTADAGKYRTKEEVDEWKEK-DPMIKYRTYLTSEGIATDDELDAIQAQVKKEVDDAYEF 303 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ +P+ + + D+ + Sbjct: 304 AQNSPDPELSVAFEDVWV 321 >gi|152988091|ref|YP_001346323.1| putative dehydrogenase E1 component [Pseudomonas aeruginosa PA7] gi|150963249|gb|ABR85274.1| probable dehydrogenase E1 component [Pseudomonas aeruginosa PA7] Length = 324 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 126/321 (39%), Positives = 186/321 (57%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S + +Q L AYR+M IR FEE+ + G + GF HL G+EA G+ L + D Sbjct: 1 MSTLSTDQLLHAYRVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLRDDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A GVD +MAE+ G++ G+ +GKGGSMH+ + G G +GIVGA Sbjct: 61 CIASTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCQGKGGSMHIADLEKGMLGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 L G A A + + SD + V FGDG +N+G V+E+ N+AA+WNL ++V ENN YA Sbjct: 121 APLAAGAALAARLKGSDAVAVAFFGDGGSNEGAVFEAMNLAAVWNLPCLFVAENNGYAEA 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+ + + A + + R F +PG+ VDG D AV A+ RA +GP +IE+ R Sbjct: 181 TAANWSVACDHIADRAAGFGMPGVTVDGFDFFAVHEAAGAAIERARAGEGPSLIEVKLTR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 Y GH D YR E+ R D +EQ R+R H S GDL I+ V+ I ++ Sbjct: 241 YYGHFEGDAQTYRDPGEVKHYRETRDCLEQFRERTSHAGLLSIGDLDAIDAEVQAHIEDA 300 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V+ A++D +P+PA+L D+ + Sbjct: 301 VQRAKNDPKPEPADLLRDVYV 321 >gi|307708690|ref|ZP_07645153.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis NCTC 12261] gi|307615264|gb|EFN94474.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis NCTC 12261] Length = 322 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 184/320 (57%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSILDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQHTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVKHIHQRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLIENTIASAEELEEIQTQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|329767524|ref|ZP_08259047.1| hypothetical protein HMPREF0428_00744 [Gemella haemolysans M341] gi|328835858|gb|EGF85580.1| hypothetical protein HMPREF0428_00744 [Gemella haemolysans M341] Length = 326 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 119/317 (37%), Positives = 188/317 (59%), Gaps = 2/317 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K++ L Y LM LIR F+ + +LY G+V G H +G+EA VG L + D M Sbjct: 7 DLTKQEHLEMYELMHLIRDFDMELSKLYSRGLVHGMTHYSVGEEAANVGAIYPLRKEDLM 66 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG +A G++ ++MAE+ G++ G KG+GGSMH++ + G G +GIVG Sbjct: 67 FSNHRGHGQTIAKGIEIDRMMAEILGKETGQCKGRGGSMHVYDLEQGNMGCNGIVGGGHG 126 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L TG A A K +++ I + C GDGA N+G +E N+A+ W+L +I+ + NN+Y + + Sbjct: 127 LSTGAALAQKMKKTGNIVICCMGDGATNEGSFHECLNMASNWDLPLIFYVINNKYGISMA 186 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 R ++R S+ I G+ V DG D+ AV M +A+ + R+ KGP+++E ++YR+ Sbjct: 187 QERCMRVEKITERAASYRIKGIHVEDGNDVLAVYDAMQEAIEHTRSGKGPVLVEAVSYRW 246 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS SD YR+REE+ E + DP + + LL N A+E +LKEIE + I+++V Sbjct: 247 FGHSASDAGKYRSREEVAEWKLK-DPNVKYKNYLLENGIATEEELKEIEDRSKATIDDAV 305 Query: 345 EFAQSDKEPDPAELYSD 361 EFA+ D + + D Sbjct: 306 EFAKESPFADGSIAFQD 322 >gi|317495722|ref|ZP_07954087.1| dehydrogenase E1 [Gemella moribillum M424] gi|316914175|gb|EFV35656.1| dehydrogenase E1 [Gemella moribillum M424] Length = 326 Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 120/317 (37%), Positives = 186/317 (58%), Gaps = 2/317 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K++ L Y LM LIR F+ + +LY G+V G H +G+EA VG L + D M Sbjct: 7 DLTKQEHLEMYELMHLIRDFDMELSKLYSRGLVHGMTHYSVGEEAANVGAIYPLRKEDLM 66 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG +A G++ ++MAE+ G++ G KG+GGSMH++ + G G +GIVG Sbjct: 67 FSNHRGHGQTIAKGIEIDRMMAEILGKETGQCKGRGGSMHVYDLEQGNMGCNGIVGGGHG 126 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L TG A A K +++ I + C GDGA N+G +E N+A+ W+L +I+ + NN+Y + + Sbjct: 127 LSTGAALAQKMKKTGNIVICCMGDGATNEGSFHECLNMASNWDLPLIFYVINNKYGISMA 186 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 R ++R S+ I G+ V DG D+ AV M +A+ + R+ KGP+++E ++YR+ Sbjct: 187 QERCMRVEKITERAASYRIKGIHVEDGNDVLAVYDAMQEAIEHARSGKGPVLVEAVSYRW 246 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS SD YR+REE+ E + DP + + LL N A+E +LKEIE IN +V Sbjct: 247 FGHSASDAGKYRSREEVAEWKLK-DPNVKYKNYLLENGIATEAELKEIEDRSIATINEAV 305 Query: 345 EFAQSDKEPDPAELYSD 361 EFA+ D + + D Sbjct: 306 EFAKESPFADGSIAFQD 322 >gi|195978331|ref|YP_002123575.1| pyruvate dehydrogenase E1 component alpha subunit PdhA [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975036|gb|ACG62562.1| pyruvate dehydrogenase E1 component alpha subunit PdhA [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 326 Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 121/323 (37%), Positives = 188/323 (58%), Gaps = 2/323 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E+ +KEQ L + M IR F+ + +L G V G H +G+EA VG LT Sbjct: 4 EMVTVSKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLTYD 63 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 64 DIIFSNHRGHGQSIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTNGIVGG 123 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 +L G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 124 GYALAVGAALTQQYKGTNNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGI 183 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 S++ A+ + R ++ IPG DG D+ AV TM KAV + R GP ++E+ + Sbjct: 184 SMSINNATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYETMSKAVEHVRGGNGPAVVEVES 243 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR+ GHS +D YRT+EE++E + DP+ + R L A++ +L ++ V++ I+ Sbjct: 244 YRWFGHSTADAGKYRTKEEVDEWKEK-DPMLKYRAYLTGEGIATDEELDALQAQVKQEID 302 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 + EFAQ+ +PD + + D+ + Sbjct: 303 AAYEFAQNSPDPDISVAFEDVWV 325 >gi|229085564|ref|ZP_04217800.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-44] gi|228697785|gb|EEL50534.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-44] Length = 332 Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 124/320 (38%), Positives = 182/320 (56%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E +EQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D Sbjct: 10 NEMTQEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDS 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 ITSTHRGHGHCIAKGCELDGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI+V ENN Y T Sbjct: 130 PLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFVAENNGYGEAT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 AS+ + + R ++NIPG++VDG D+ AV +AV R +GP +IE +TYR Sbjct: 190 PFEYASSCKSIADRAKAYNIPGVRVDGKDLLAVYKAAAEAVERARNGEGPTLIECMTYRN 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH + Y+T EE E + D I RK L++ +E +L +E V + + ++ Sbjct: 250 YGHFEGEAQTYKTAEEKEEHLNEKDAIVNFRKHLINKGLLTETELVNMERAVDEAVQKAI 309 Query: 345 EFAQSDKEPDPAELYSDILI 364 EF++ P EL +D+ + Sbjct: 310 EFSEKSPYPADEELLTDVYV 329 >gi|255020494|ref|ZP_05292558.1| Pyruvate dehydrogenase E1 component alpha subunit [Acidithiobacillus caldus ATCC 51756] gi|254970014|gb|EET27512.1| Pyruvate dehydrogenase E1 component alpha subunit [Acidithiobacillus caldus ATCC 51756] Length = 328 Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 120/299 (40%), Positives = 171/299 (57%), Gaps = 3/299 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHI 115 R ML RRFEE+ + Y +GGF HL GQEA +G+ G D ++T YR+H H Sbjct: 11 REMLFARRFEERCAEAYQERQIGGFLHLYPGQEACAIGVLEKARPGHDYVVTGYRDHIHA 70 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + GVD +MAEL G++ G SKG+GGSMH+F F GG+ +VG L G A + Sbjct: 71 IKSGVDPKAVMAELFGKETGCSKGRGGSMHLFDPDRRFMGGYALVGGPFPLAAGFGKAIQ 130 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R D+I + GDGA NQG +E+ N+A+LW+L V++V ENN Y +GT++ RA+ + + Sbjct: 131 MRGGDEISICFLGDGANNQGTFHETMNMASLWDLPVLFVCENNLYGIGTAIERATVEIHQ 190 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 KR + I Q DG DI V + AV Y R + P +E++TYR RGHSMSD Y Sbjct: 191 YKRVAPYRIEAAQCDGQDIDVVLQHAEAAVNYVREKRRPYFLELMTYRLRGHSMSDSGAY 250 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS-VEFAQSDKEP 353 R+++E+ E + DPI + RL+ SE D ++ ++ I + FA+ EP Sbjct: 251 RSKDEV-EQWAQRDPIGIYKARLVAAGVLSEADFAAMDQAIQDEIEKEIIPFAEQSPEP 308 >gi|306825193|ref|ZP_07458535.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432629|gb|EFM35603.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 322 Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 121/311 (38%), Positives = 180/311 (57%), Gaps = 2/311 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L +R M IRR + K QL G V G H +G+EA VG ++L D + + +R H Sbjct: 10 LEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDDLITSNHRGH 69 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG + + G A Sbjct: 70 GQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGGMGIAVGAAL 129 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + + + + Sbjct: 130 SQQMKNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGISADIKKMTNV 189 Query: 233 TNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + +R ++ IPGM + DG ++ V KAV + R GP++IE +TYR+ GHS SD Sbjct: 190 EHIHQRSAAYGIPGMFIEDGNNVINVYEGFKKAVDHVRGGNGPVLIESITYRWLGHSSSD 249 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 P YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + SV+FA+ Sbjct: 250 PGKYRTREEV-ELWKQKDPIENLRKYLIENNIASAEELEEIQAQVKEAVEASVKFAEESP 308 Query: 352 EPDPAELYSDI 362 P + DI Sbjct: 309 FPPLESAFEDI 319 >gi|310826716|ref|YP_003959073.1| hypothetical protein ELI_1122 [Eubacterium limosum KIST612] gi|308738450|gb|ADO36110.1| hypothetical protein ELI_1122 [Eubacterium limosum KIST612] Length = 320 Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 124/318 (38%), Positives = 179/318 (56%), Gaps = 3/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 EF+KE Y M R FEEK L+ G V G HL +GQE VG ++L EGD + Sbjct: 3 EFDKELLTKMYYRMNQARFFEEKVAWLFSRGQVHGTTHLSMGQEGSAVGACLALDEGDLV 62 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +R H + G+D +MAE G++ G KGKGGSMH+ K+G G +G+VG Sbjct: 63 SLTHRGHSQAIGFGLDVKLMMAEFLGKETGYCKGKGGSMHIADLKSGNIGANGVVGGGYP 122 Query: 166 LGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A KY+++ K+ V+CF GDG+ N+G +ES N+A++W L VI+ +ENN Y M T Sbjct: 123 LSCGAALTQKYKKTGKV-VLCFAGDGSTNEGNFHESLNLASVWKLPVIFYVENNLYGMST 181 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + N S R ++ IPG+ +DG DI V + KA Y + KGP++IE TYRY Sbjct: 182 PIEKHMNIENISDRAAAYGIPGLTIDGNDIIEVYKIVRKARQYAHSGKGPVLIESKTYRY 241 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS SD YR++EE+ R DPI + + L +K + +I+ + I ++V Sbjct: 242 NGHSKSDAQVYRSKEEVEAWRQK-DPITRFERYLEEDKVMLPDQMVQIKEAAYQSIEDAV 300 Query: 345 EFAQSDKEPDPAELYSDI 362 EFA++ EP + D+ Sbjct: 301 EFAKNSPEPPVTAVLEDV 318 >gi|149025517|ref|ZP_01836450.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP23-BS72] gi|147929389|gb|EDK80386.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP23-BS72] gi|332076284|gb|EGI86750.1| dehydrogenase E1 component family protein [Streptococcus pneumoniae GA41301] Length = 322 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 184/320 (57%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFQKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|282856819|ref|ZP_06266078.1| pyruvate dehydrogenase E1 component subunit alpha [Pyramidobacter piscolens W5455] gi|282585329|gb|EFB90638.1| pyruvate dehydrogenase E1 component subunit alpha [Pyramidobacter piscolens W5455] Length = 334 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 118/321 (36%), Positives = 180/321 (56%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V +++K+ Y M+ IR FE+ + G + GF HL IG+EA+ G+ +LT D Sbjct: 14 VGKYSKKLLTELYGKMVTIRLFEQTVESHFLAGEIPGFVHLYIGEEAIAAGIMANLTNRD 73 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A G D ++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 74 YIESTHRGHGHTIAKGADLKRMMAEIFGKATGYCKGKGGSMHIADFSIGMLGANGIVGGG 133 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A K DK+ VV FGDGA+N+G +E+ N+AA+W L V++V E NQ+A Sbjct: 134 YTLAVGAGLATKLSGEDKVSVVFFGDGASNRGTFHEALNMAAIWQLPVLFVCEMNQWAST 193 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T ++ N + R ++IPG VDG D+ AV VA RA GP ++E TYR Sbjct: 194 TPYRTTTSVENIADRCQGYSIPGYVVDGNDVLAVYEAAKDIVADIRAGTGPALLECKTYR 253 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +GH + DP YRT+EE+ ++PI + +++L ++ DL + + I + Sbjct: 254 IKGHFVGDPEKYRTKEEVQHEFETNNPITRFEEKVLKAGALTQADLDAVYKQAEQEIAEA 313 Query: 344 VEFAQSDKEPDPAELYSDILI 364 ++FA+ EP P +Y D+ + Sbjct: 314 LKFAKESPEPAPEAIYEDLYV 334 >gi|307706609|ref|ZP_07643416.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis SK321] gi|307618064|gb|EFN97224.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis SK321] Length = 322 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 184/320 (57%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|164686594|ref|ZP_02210622.1| hypothetical protein CLOBAR_00186 [Clostridium bartlettii DSM 16795] gi|164604323|gb|EDQ97788.1| hypothetical protein CLOBAR_00186 [Clostridium bartlettii DSM 16795] Length = 320 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 127/316 (40%), Positives = 185/316 (58%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE L Y+ M +R+FEEK + + GM+ G HL IGQEA V M+L +GD + Sbjct: 3 ISKEIMLEMYKRMDQVRKFEEKVSEFFAKGMIHGTTHLSIGQEASGVPAVMALEDGDLVT 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +R H + G+D +K+MAEL G+ G KGKGGSMH+ G G +G+VG ++L Sbjct: 63 LTHRGHAMSIGMGIDLNKMMAELMGKATGFCKGKGGSMHIVDVDAGNLGSNGVVGGGLTL 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+++ KI + FGDGA+N+G +E N++++W L VI+ ENN Y M T Sbjct: 123 APGAALTQKYKKTGKIVLCSFGDGASNEGSFHEGVNLSSVWKLPVIFYCENNLYGMSTHH 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ++ N + R S+ I VDG D AV T+ KA CR +GP+++E TYR+ G Sbjct: 183 TKVMNVKNVADRASSYGIQSFIVDGYDAVAVYETVKKAAEICRKGEGPVLVEAKTYRWAG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS SD YRT+EEI+ + D + ++R ++L +ASE +L+ +E+ V KII +VEF Sbjct: 243 HSKSDKNLYRTQEEIDSWKEK-DGLIKLRNKILELGYASEEELQALELEVEKIIEEAVEF 301 Query: 347 AQSDKEPDPAELYSDI 362 + EP L DI Sbjct: 302 GMNSPEPSLDILEEDI 317 >gi|149006176|ref|ZP_01829888.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP18-BS74] gi|182684103|ref|YP_001835850.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae CGSP14] gi|303255762|ref|ZP_07341804.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS455] gi|303260571|ref|ZP_07346537.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP-BS293] gi|303262705|ref|ZP_07348644.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP14-BS292] gi|303265239|ref|ZP_07351150.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS397] gi|303267389|ref|ZP_07353246.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS457] gi|303269257|ref|ZP_07355032.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS458] gi|307127240|ref|YP_003879271.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae 670-6B] gi|147761953|gb|EDK68915.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP18-BS74] gi|182629437|gb|ACB90385.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae CGSP14] gi|301801967|emb|CBW34695.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus pneumoniae INV200] gi|302597274|gb|EFL64378.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS455] gi|302636137|gb|EFL66633.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP14-BS292] gi|302638284|gb|EFL68753.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP-BS293] gi|302641214|gb|EFL71586.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS458] gi|302643086|gb|EFL73376.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS457] gi|302645210|gb|EFL75446.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS397] gi|306484302|gb|ADM91171.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae 670-6B] gi|332075097|gb|EGI85568.1| dehydrogenase E1 component family protein [Streptococcus pneumoniae GA17545] Length = 322 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 184/320 (57%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNIEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFQKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPSLESAFEDI 319 >gi|225868335|ref|YP_002744283.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus equi subsp. zooepidemicus] gi|225701611|emb|CAW98870.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus equi subsp. zooepidemicus] Length = 322 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 121/318 (38%), Positives = 185/318 (58%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +KEQ L + M IR F+ + +L G V G H +G+EA VG LT D + + Sbjct: 5 SKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLTYDDIIFS 64 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG +L Sbjct: 65 NHRGHGQSIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTNGIVGGGYALA 124 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + S+S Sbjct: 125 VGAALTQQYKGTNNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGISMSIS 184 Query: 228 RASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A+ + R ++ IPG DG D+ AV TM KAV + R GP ++E+ +YR+ G Sbjct: 185 NATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYETMGKAVEHVRGGNGPAVVEVESYRWFG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS +D YRT+EE++E + DP+ + R L ++ +L I+ V++ I+ + EF Sbjct: 245 HSTADAGKYRTKEEVDEWKEK-DPMLKYRAYLTGEGIVTDEELDAIQAQVKQEIDAAYEF 303 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ +PD + + D+ + Sbjct: 304 AQNSPDPDISVAFEDVWV 321 >gi|15901029|ref|NP_345633.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae TIGR4] gi|111658297|ref|ZP_01408987.1| hypothetical protein SpneT_02000526 [Streptococcus pneumoniae TIGR4] gi|148985773|ref|ZP_01818901.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP3-BS71] gi|148989195|ref|ZP_01820585.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP6-BS73] gi|148994513|ref|ZP_01823693.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP9-BS68] gi|149004267|ref|ZP_01829044.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP14-BS69] gi|149013101|ref|ZP_01833947.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP19-BS75] gi|168488993|ref|ZP_02713192.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae SP195] gi|168492501|ref|ZP_02716644.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae CDC0288-04] gi|168577166|ref|ZP_02722981.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae MLV-016] gi|194398360|ref|YP_002037775.1| TPP-dependent acetoin dehydrogenase subunit alpha [Streptococcus pneumoniae G54] gi|225854639|ref|YP_002736151.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae JJA] gi|225856841|ref|YP_002738352.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae P1031] gi|225861104|ref|YP_002742613.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae Taiwan19F-14] gi|237650110|ref|ZP_04524362.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae CCRI 1974] gi|237822312|ref|ZP_04598157.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae CCRI 1974M2] gi|298231004|ref|ZP_06964685.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255428|ref|ZP_06979014.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502833|ref|YP_003724773.1| pyruvate dehydrogenase [Streptococcus pneumoniae TCH8431/19A] gi|14972643|gb|AAK75273.1| putative acetoin dehydrogenase, E1 component, alpha subunit [Streptococcus pneumoniae TIGR4] gi|147757761|gb|EDK64775.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP14-BS69] gi|147763046|gb|EDK69989.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP19-BS75] gi|147922077|gb|EDK73200.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP3-BS71] gi|147925418|gb|EDK76496.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP6-BS73] gi|147927183|gb|EDK78219.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP9-BS68] gi|183572345|gb|EDT92873.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae SP195] gi|183573325|gb|EDT93853.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae CDC0288-04] gi|183577219|gb|EDT97747.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae MLV-016] gi|194358027|gb|ACF56475.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus pneumoniae G54] gi|225723408|gb|ACO19261.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae JJA] gi|225725030|gb|ACO20882.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae P1031] gi|225728304|gb|ACO24155.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae Taiwan19F-14] gi|298238428|gb|ADI69559.1| pyruvate dehydrogenase (acetyl-transferring) [Streptococcus pneumoniae TCH8431/19A] gi|301794265|emb|CBW36686.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus pneumoniae INV104] gi|301800103|emb|CBW32704.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus pneumoniae OXC141] gi|327389293|gb|EGE87638.1| dehydrogenase E1 component family protein [Streptococcus pneumoniae GA04375] gi|332073509|gb|EGI83988.1| dehydrogenase E1 component family protein [Streptococcus pneumoniae GA17570] gi|332200473|gb|EGJ14545.1| dehydrogenase E1 component family protein [Streptococcus pneumoniae GA41317] Length = 322 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 184/320 (57%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNIEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFQKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|76788339|ref|YP_329623.1| acetoin dehydrogenase, TPP-dependent, E1 component, alpha subunit [Streptococcus agalactiae A909] gi|76563396|gb|ABA45980.1| acetoin dehydrogenase, TPP-dependent, E1 component, alpha subunit, putative [Streptococcus agalactiae A909] Length = 322 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 119/319 (37%), Positives = 184/319 (57%), Gaps = 2/319 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KEQ L + M IR + K +L G V G H +G+EA VG LT+ D + Sbjct: 4 LSKEQHLDMFLKMQRIRDVDMKFNKLVRRGFVQGMTHFSVGEEAASVGAIQDLTDSDIIF 63 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HG +A G+D + AEL G+ G SKG+GGSMH+ + + G YG +GIVG +L Sbjct: 64 SNHRGHGQTIAKGIDIGGMFAELAGKATGTSKGRGGSMHLANLEKGNYGTNGIVGGGYAL 123 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A +Y +D I + GD A N+G +ES N+AA+WNL VI+ I NN+Y + T + Sbjct: 124 AVGAALTQQYEGTDNIVITFSGDSATNEGSFHESVNLAAVWNLPVIFFIINNRYGISTDI 183 Query: 227 SRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + ++ + R ++ IPG V DG D+ AV M + + Y R+ GP I+E+ +YR+ Sbjct: 184 TYSTKIPHLYMRADAYGIPGHYVEDGNDLMAVYEKMHEVINYVRSGNGPAIVEVESYRWF 243 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS +D YRT+EE++ ++ DP+++ R L+ N+ A+E +L IE V K + V+ Sbjct: 244 GHSTADAGVYRTKEEVDSWKAK-DPVKRYRAYLIENEIATEEELAAIEAQVIKEVEEGVK 302 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ PD + + D+ + Sbjct: 303 FAEESPFPDMSVAFEDVFV 321 >gi|22537041|ref|NP_687892.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae 2603V/R] gi|25010949|ref|NP_735344.1| hypothetical protein gbs0895 [Streptococcus agalactiae NEM316] gi|76799368|ref|ZP_00781525.1| acetoin dehydrogenase [Streptococcus agalactiae 18RS21] gi|77407981|ref|ZP_00784731.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae COH1] gi|77410725|ref|ZP_00787084.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae CJB111] gi|77413176|ref|ZP_00789375.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae 515] gi|22533899|gb|AAM99764.1|AE014232_2 acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae 2603V/R] gi|23095328|emb|CAD46539.1| unknown [Streptococcus agalactiae NEM316] gi|76585275|gb|EAO61876.1| acetoin dehydrogenase [Streptococcus agalactiae 18RS21] gi|77160794|gb|EAO71906.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae 515] gi|77163261|gb|EAO74213.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae CJB111] gi|77173439|gb|EAO76558.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae COH1] Length = 322 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 119/319 (37%), Positives = 184/319 (57%), Gaps = 2/319 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KEQ L + M IR + K +L G V G H +G+EA VG LT+ D + Sbjct: 4 LSKEQHLDMFLKMQRIRDVDMKFNKLVRRGFVQGMTHFSVGEEAASVGAIQDLTDSDIIF 63 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HG +A G+D + AEL G+ G SKG+GGSMH+ + + G YG +GIVG +L Sbjct: 64 SNHRGHGQTIAKGIDIGGMFAELAGKATGTSKGRGGSMHLANLEKGNYGTNGIVGGGYAL 123 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A +Y +D I + GD A N+G +ES N+AA+WNL VI+ I NN+Y + T + Sbjct: 124 AVGAALTQQYEGTDNIVIAFSGDSATNEGSFHESVNLAAVWNLPVIFFIINNRYGISTDI 183 Query: 227 SRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + ++ + R ++ IPG V DG D+ AV M + + Y R+ GP I+E+ +YR+ Sbjct: 184 TYSTKIPHLYMRADAYGIPGHYVEDGNDLMAVYEKMHEVINYVRSGNGPAIVEVESYRWF 243 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS +D YRT+EE++ ++ DP+++ R L+ N+ A+E +L IE V K + V+ Sbjct: 244 GHSTADAGVYRTKEEVDSWKAK-DPVKRYRAYLIENEIATEEELAAIEAQVIKEVEEGVK 302 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ PD + + D+ + Sbjct: 303 FAEESPFPDMSVAFEDVFV 321 >gi|270292748|ref|ZP_06198959.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. M143] gi|270278727|gb|EFA24573.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. M143] Length = 322 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 182/320 (56%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQHTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHHRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENTIASAEELEEIQAQVKEAVET 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|332360412|gb|EGJ38223.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK355] Length = 357 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 118/321 (36%), Positives = 182/321 (56%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 EV + +KE+ + Y+ M IR FEE + + G + GF HL G+EA+ G+ +LT+ Sbjct: 35 EVEQISKEKAKTMYKTMWDIRNFEENTRRFFAAGQIPGFVHLYAGEEAIATGVCANLTDQ 94 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HGH +A G D +MAE+ G++ G+ KGKGGSMH+ G G +G+VG Sbjct: 95 DYITSTHRGHGHCVAKGGDLKGMMAEIFGKETGLGKGKGGSMHIADLDKGILGANGMVGG 154 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 L TG A NKY ++D + V FGDGAAN+G +E N+A++W L VI+V ENN +A Sbjct: 155 GFGLATGAAMRNKYLKTDSVAVCFFGDGAANEGNFHECLNMASIWKLPVIFVNENNLFAE 214 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T +SA ++R ++N+PG++V+G D+ AV +AV R +GP +IE +TY Sbjct: 215 STPQWYSSASGTIAERAAAYNMPGIRVNGKDLFAVYQVAKEAVERARRGEGPTLIEAVTY 274 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D Y+ E + ++ D ++ R + + +E +L I RK + Sbjct: 275 RDHGHFEGDEQRYKALEGEEKDWADVDALDVFRDYAIEHGLLTEDELDAILEESRKDVEE 334 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 +++FAQ P P L D+ Sbjct: 335 AIKFAQDSPIPRPDSLLEDVF 355 >gi|307709336|ref|ZP_07645794.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis SK564] gi|307619919|gb|EFN99037.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis SK564] Length = 322 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 183/320 (57%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESITY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENTIASAEELEEIQALVKEAVET 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|319744917|gb|EFV97249.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus agalactiae ATCC 13813] Length = 322 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 119/319 (37%), Positives = 184/319 (57%), Gaps = 2/319 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KEQ L + M IR + K +L G V G H +G+EA VG LT+ D + Sbjct: 4 LSKEQHLDMFLKMQRIRDVDMKFNKLVRRGFVQGMTHFSVGEEAASVGAIQDLTDSDIIF 63 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HG +A G+D + AEL G+ G SKG+GGSMH+ + + G YG +GIVG +L Sbjct: 64 SNHRGHGQTIAKGIDIGGMFAELAGKATGTSKGRGGSMHLANLEKGNYGTNGIVGGGYAL 123 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A +Y +D I + GD A N+G +ES N+AA+WNL VI+ I NN+Y + T + Sbjct: 124 AVGAALTQQYEGTDNIVIAFSGDSATNEGSFHESVNLAAVWNLPVIFFIINNRYGISTDI 183 Query: 227 SRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + ++ + R ++ IPG V DG D+ AV M + + Y R+ GP I+E+ +YR+ Sbjct: 184 TYSTKIPHLYMRADAYGIPGHYVEDGNDLMAVYEKMHEVINYVRSGNGPAIVEVESYRWF 243 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS +D YRT+EE++ ++ DP+++ R L+ N+ A+E +L IE V K + V+ Sbjct: 244 GHSTADAGVYRTKEEVDSWKAK-DPVKRYRAYLIENEIATEEELAAIESQVIKEVEEGVK 302 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ PD + + D+ + Sbjct: 303 FAEESPFPDMSVAFEDVFV 321 >gi|154247966|ref|YP_001418924.1| pyruvate dehydrogenase (acetyl-transferring) [Xanthobacter autotrophicus Py2] gi|154162051|gb|ABS69267.1| Pyruvate dehydrogenase (acetyl-transferring) [Xanthobacter autotrophicus Py2] Length = 335 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 123/316 (38%), Positives = 179/316 (56%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K+Q L AYR M IR FEE+ + G + GF HL G+EA G+ M LT+ D++ + Sbjct: 18 KDQLLEAYRTMRTIRDFEERLHVEFAKGDIPGFVHLYAGEEACATGVMMHLTDIDRIAST 77 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R HGH +A GVD ++MAE+ G++ G +GKGGSMH+ G G +GI+GA L Sbjct: 78 HRGHGHCIAKGVDVGEMMAEIYGKETGSCRGKGGSMHIADLSKGMMGANGILGAGAPLIC 137 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G A K+R + + FGDGAANQG V ES N+AA+WNL VI+VIENN YA TSV+ Sbjct: 138 GAGLAAKFRGDGGVGITFFGDGAANQGTVLESMNLAAIWNLPVIFVIENNGYAEATSVTY 197 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 A+A ++ R F +P + VDG D AV +A RA GP ++E R+ GH Sbjct: 198 ATAVDSYVDRATGFGLPAVSVDGTDFFAVHKAAGDLIAKARAGGGPAVLECKMNRFFGHF 257 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 D Y+ + E R+N D ++ R+ SE ++ ++ V +I+++V A+ Sbjct: 258 EGDSQTYKAKGENEFNRANRDCLKIFADRVTAAGVVSEAEIALLDREVASLIDDAVTSAK 317 Query: 349 SDKEPDPAELYSDILI 364 + P +L SD+ + Sbjct: 318 AAPLPAARDLLSDVYV 333 >gi|297582924|ref|YP_003698704.1| pyruvate dehydrogenase (acetyl-transferring) [Bacillus selenitireducens MLS10] gi|297141381|gb|ADH98138.1| Pyruvate dehydrogenase (acetyl-transferring) [Bacillus selenitireducens MLS10] Length = 333 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 120/322 (37%), Positives = 177/322 (54%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 EV+ E+ Y+ M IR FE++ +L+G G + GF HL G+EAV VG+ + Sbjct: 7 EVTGITTEKARWMYQKMQEIRMFEDRVHELFGQGKLPGFVHLYAGEEAVAVGVCAHFDDK 66 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HGH +A G + +MAEL G+ G+ GKGGSMH+ + G G +GIVG Sbjct: 67 DTITSTHRGHGHCIAKGCELDGMMAELYGKSTGLCNGKGGSMHIADVEKGMLGANGIVGG 126 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 L TG A K +++ + FGDGA N G +E N+AA+W+L V++V ENN YA Sbjct: 127 GFPLATGAALTAKLKKTGGVSACFFGDGAGNHGTFHEGINLAAIWDLPVLFVAENNGYAE 186 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T AS+ N + R + IPG VDG D+ AV +AV + +GP +IE TY Sbjct: 187 ATPFEYASSCENIADRAQGYGIPGEIVDGKDVVAVYEAAQRAVERAKRGEGPTLIECKTY 246 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D Y+T E+ + D I + R +L N +E +LK I+ +V + +N Sbjct: 247 RNYGHFEGDAQKYKTAEDKERHLNEDDAIRRFRAYILENSLMTEDELKTIDQDVEEAVNR 306 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 SV FA+ +P +L +D+ + Sbjct: 307 SVTFAEESPDPTIDDLTTDVYV 328 >gi|293365474|ref|ZP_06612183.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus oralis ATCC 35037] gi|307703430|ref|ZP_07640372.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus oralis ATCC 35037] gi|322375260|ref|ZP_08049773.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. C300] gi|291315842|gb|EFE56286.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus oralis ATCC 35037] gi|307622837|gb|EFO01832.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus oralis ATCC 35037] gi|321279523|gb|EFX56563.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. C300] Length = 322 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 183/320 (57%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++W L VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQHTGKIVVCFFGDGATNEGVFHEAVNMASIWKLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|148998419|ref|ZP_01825861.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP11-BS70] gi|168483226|ref|ZP_02708178.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae CDC1873-00] gi|307067675|ref|YP_003876641.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component subunit alpha [Streptococcus pneumoniae AP200] gi|147755816|gb|EDK62861.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP11-BS70] gi|172043465|gb|EDT51511.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae CDC1873-00] gi|306409212|gb|ADM84639.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Streptococcus pneumoniae AP200] Length = 322 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 183/320 (57%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++ D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLAFNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFQKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|327470072|gb|EGF15536.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK330] Length = 357 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 118/321 (36%), Positives = 182/321 (56%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 EV + +KE+ + Y+ M IR FEE + + G + GF HL G+EA+ G+ +LT+ Sbjct: 35 EVEQISKEKAKTMYKTMWDIRNFEENTRRFFAAGQIPGFVHLYAGEEAIATGVCANLTDQ 94 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HGH +A G D +MAE+ G++ G+ KGKGGSMH+ G G +G+VG Sbjct: 95 DYITSTHRGHGHCVAKGGDLKGMMAEIFGKETGLGKGKGGSMHIADLDKGILGANGMVGG 154 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 L TG A NKY ++D + V FGDGAAN+G +E N+A++W L VI+V ENN +A Sbjct: 155 GFGLATGAAMRNKYLKTDSVAVCFFGDGAANEGNFHECLNMASIWKLPVIFVNENNFFAE 214 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T +SA ++R ++N+PG++V+G D+ AV +AV R +GP +IE +TY Sbjct: 215 STPQWYSSASGTIAERAAAYNMPGVRVNGKDLFAVYQVAKEAVERARRGEGPTLIEAVTY 274 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D Y+ E + ++ D ++ R + + +E +L I RK + Sbjct: 275 RDHGHFEGDEQKYKALEGEEKDWADVDALDVFRDYAIEHGLLTEEELDAILEESRKDVEE 334 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 +++FAQ P P L D+ Sbjct: 335 AIKFAQDSPIPRPDSLLEDVF 355 >gi|157149908|ref|YP_001450422.1| acetoin dehydrogenase [Streptococcus gordonii str. Challis substr. CH1] gi|157074702|gb|ABV09385.1| acetoin dehydrogenase [Streptococcus gordonii str. Challis substr. CH1] Length = 322 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 182/320 (56%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MATLDKSLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNADD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++W L VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWKLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHHRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ I Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLIENNIASAEELEEIQAQVKEAIEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|312866174|ref|ZP_07726395.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus downei F0415] gi|311098578|gb|EFQ56801.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus downei F0415] Length = 322 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 119/322 (36%), Positives = 185/322 (57%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K+Q + YR M IR F+ + +L G V G H +G+EA VG LT D Sbjct: 1 MANLSKDQYIDLYRKMERIREFDMRINKLVRRGFVQGMTHFSVGEEAASVGAMAPLTYDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A +D +MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 61 IIFSNHRGHGQSIAKDMDLKGMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y++++ I V GDGA N+G +ES N+A+ W L VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYKKTNNIVVAFSGDGATNEGSFHESVNLASAWQLPVIFFIINNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 +++A+ + R ++ IPG V DG D+ AV M K VA RA KGP +IE+ +Y Sbjct: 181 MDITKATHTPHLYTRADAYGIPGYYVQDGNDVMAVYDQMKKVVADVRAGKGPALIEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YR++EE++ + DP+ + R L +E DL E+ V I+ Sbjct: 241 RWFGHSTADAGKYRSKEEVDTWKKK-DPLLKFRDFALKETDLTEADLDEVHEQVVAEIDQ 299 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 + +FA++ +PD + + DI + Sbjct: 300 AYDFAKNSPDPDLSVAFEDIWV 321 >gi|15903095|ref|NP_358645.1| TPP-dependent acetoin dehydrogenase alpha chain [Streptococcus pneumoniae R6] gi|116516204|ref|YP_816502.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus pneumoniae D39] gi|221231877|ref|YP_002511029.1| pyruvate dehydrogenase E1 component,alpha subunit [Streptococcus pneumoniae ATCC 700669] gi|225858951|ref|YP_002740461.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae 70585] gi|15458672|gb|AAK99855.1| TPP-dependent acetoin dehydrogenase alpha chain [Streptococcus pneumoniae R6] gi|116076780|gb|ABJ54500.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus pneumoniae D39] gi|220674337|emb|CAR68883.1| putative pyruvate dehydrogenase E1 component,alpha subunit [Streptococcus pneumoniae ATCC 700669] gi|225720711|gb|ACO16565.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae 70585] Length = 322 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 184/320 (57%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNIEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFQKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L++I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASAEELEKIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|312143273|ref|YP_003994719.1| Pyruvate dehydrogenase (acetyl-transferring) [Halanaerobium sp. 'sapolanicus'] gi|311903924|gb|ADQ14365.1| Pyruvate dehydrogenase (acetyl-transferring) [Halanaerobium sp. 'sapolanicus'] Length = 328 Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 186/320 (58%), Gaps = 6/320 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +KE+ + ML+IR FE K + + G + GF HL +G+EAV VG +L E D + + Sbjct: 4 SKEELVELLEKMLVIREFETKVQKHFAEGEIPGFVHLYLGEEAVAVGACSALKEDDFITS 63 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH+LA G D K+MAE+ G+ G +KGKGGSMH+ G G +GIVGA + + Sbjct: 64 THRGHGHLLARGGDIKKMMAEIFGKATGYNKGKGGSMHIADVSLGILGANGIVGAGLPIA 123 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG---- 223 G + + D + + FGDGA+N+G +E+ N+A++WNL V++V ENN Y + Sbjct: 124 AGSGISAQILNKDSVTICFFGDGASNRGTFHEAINMASVWNLPVVFVCENNLYGISMPQY 183 Query: 224 TSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T+ R + S R V++ I G+ VDG D+ AV + +AV RA GP +IE TY Sbjct: 184 TNDKRKGQNIQDVSDRAVAYGISGVTVDGNDVMAVNEAVVEAVKKARAGGGPSLIECKTY 243 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+RGH DP YR+ EE+ + DPI++ K L + + K++ V+ I Sbjct: 244 RHRGHFEGDPTVYRSDEEVKRWKEK-DPIDRFVKVLKDQEVLDDDGYKKLRQEVKGRIEE 302 Query: 343 SVEFAQSDKEPDPAELYSDI 362 +++FAQ EPDP+E+ +D+ Sbjct: 303 ALQFAQESPEPDPSEVTTDV 322 >gi|257877224|ref|ZP_05656877.1| acetoin dehydrogenase subunit alpha [Enterococcus casseliflavus EC20] gi|257811390|gb|EEV40210.1| acetoin dehydrogenase subunit alpha [Enterococcus casseliflavus EC20] Length = 333 Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 110/304 (36%), Positives = 179/304 (58%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M IR F+EK +L+ G++ G HL +GQEA G L + D + + +R HGH LA Sbjct: 27 MWEIRFFDEKVDELFARGLIHGTTHLAVGQEATAAGSSAVLKKTDWITSTHRGHGHTLAK 86 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G + +++MAEL GR G +KGKGGSMH+ G G +GIVG + G A +K ++ Sbjct: 87 GTNVNEMMAELFGRTTGTNKGKGGSMHIADLDTGNLGANGIVGGGFPIAVGAALTSKMKK 146 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + ++ + GDG+ N+G +E+ N+A++W+L V++ IENN+Y M SV + + S+R Sbjct: 147 TKQVALSYGGDGSTNEGSFHEAVNLASIWDLPVVFFIENNKYGMSGSVEKMTNIPQLSER 206 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 ++ I G+ +DG ++ V T +AV R +GP +IE +TYR++GHS SD YRT+ Sbjct: 207 AKAYGIEGITIDGNNLIEVIETTYQAVEKARRGEGPTLIEAMTYRWKGHSKSDAKKYRTK 266 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +E + R DPI+Q + L+ +E + +EI N ++ IN++V F ++ + Sbjct: 267 QEEEQWRKEKDPIQQAKTTLIAAGIFTEEEAEEIRKNAKQAINDAVTFGENSPVVAVETM 326 Query: 359 YSDI 362 + D+ Sbjct: 327 FEDV 330 >gi|332522491|ref|ZP_08398743.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus porcinus str. Jelinkova 176] gi|332313755|gb|EGJ26740.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus porcinus str. Jelinkova 176] Length = 322 Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 119/318 (37%), Positives = 186/318 (58%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++EQ L + M IR F+ + +L G V G H +G+EA VG LT D + + Sbjct: 5 SREQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFTVGEEAANVGAVAHLTYDDIIFS 64 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG +L Sbjct: 65 NHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGGYALA 124 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + +++ Sbjct: 125 VGAALTQQYKGTNNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGISMNIN 184 Query: 228 RASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A+ + R ++ IPG DG D+ AV TMD+AV + R GP I+E+ +YR+ G Sbjct: 185 NATNTPHLYTRAEAYGIPGFYCEDGNDLMAVYETMDQAVKHVRGGNGPAIVEVESYRWFG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS +D YRT+EE+ + DP+ + R L A++ +L I+ V++ I+++ E+ Sbjct: 245 HSTADAGKYRTKEEVASWKEK-DPMLKYRAYLTKEGIATDEELDAIQAQVKQEIDDAYEY 303 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ +P+ + Y DI + Sbjct: 304 AQNSPDPELSVAYEDIWV 321 >gi|306829531|ref|ZP_07462721.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus mitis ATCC 6249] gi|304428617|gb|EFM31707.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus mitis ATCC 6249] Length = 322 Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 181/320 (56%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQHTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHHRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V+ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASVEELEEIQAQVKTAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|313890048|ref|ZP_07823683.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus pseudoporcinus SPIN 20026] gi|313121409|gb|EFR44513.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus pseudoporcinus SPIN 20026] Length = 322 Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 119/318 (37%), Positives = 186/318 (58%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++EQ L + M IR F+ + +L G V G H +G+EA VG LT D + + Sbjct: 5 SREQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLTYDDIIFS 64 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG +L Sbjct: 65 NHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGGYALA 124 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + +++ Sbjct: 125 VGAALTQQYKGTNNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGISMNIN 184 Query: 228 RASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A+ + R ++ IPG DG D+ AV TMD+AV + R GP I+E+ +YR+ G Sbjct: 185 NATNTPHLYTRAEAYGIPGFYCEDGNDLMAVYETMDQAVKHVRGGNGPAIVEVESYRWFG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS +D YRT+EE+ + DP+ + R L A++ +L I+ V++ I+++ E+ Sbjct: 245 HSTADAGKYRTKEEVASWKEK-DPMLKYRAYLTKEGIATDEELDAIQAQVKQEIDDAYEY 303 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ +P+ + Y DI + Sbjct: 304 AQNSPDPELSVAYEDIWV 321 >gi|307730127|ref|YP_003907351.1| pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. CCGE1003] gi|307584662|gb|ADN58060.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. CCGE1003] Length = 333 Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 123/318 (38%), Positives = 181/318 (56%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE L+ YR M IR FEE+ +G G + GF HL G+EA VG+ L +GD++ Sbjct: 14 LDKEALLAVYRKMRTIREFEERLHVDFGRGDIPGFVHLYAGEEATGVGILHHLGDGDRIA 73 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A GVD +M E+ GR+GG GKGGSMH+ G G +GI+GA L Sbjct: 74 STHRGHGHCIAKGVDPVAMMKEIYGRKGGSCNGKGGSMHIADLSKGMMGANGILGAGAPL 133 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A A ++R ++ + GDGA+NQG V ES N+AA+WNL VI+VIENN YA T+ Sbjct: 134 ICGAALAARFRGKGEVGITFCGDGASNQGTVLESLNLAAVWNLPVIFVIENNGYAESTAR 193 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +A ++ R F IPG+ VDG D AV + + R GP ++E T R+ G Sbjct: 194 EYGTAVDSYVDRAAGFGIPGVTVDGTDFFAVYEAAGEVIRRAREGGGPSLLECKTVRFFG 253 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D YR E++++RSN D I++ + ++ + + L I+ V +I +SV Sbjct: 254 HFEGDAQTYRGPGELDDIRSNKDCIKKFVQTVVRAEVITRDALDAIDREVAALIEHSVVE 313 Query: 347 AQSDKEPDPAELYSDILI 364 A++ P P +L +D+ + Sbjct: 314 AKAAPLPGPDDLLADVYV 331 >gi|325120314|emb|CBZ55868.1| putative pyruvate dehydrogenase [Neospora caninum Liverpool] Length = 559 Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 118/306 (38%), Positives = 180/306 (58%), Gaps = 11/306 (3%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 ML R E+ +LY MG GF HL GQEAV G+ L D +++ YR+H H + Sbjct: 189 MLTGRMVEDACARLYYMGKTAGFVHLYTGQEAVSSGVIKLLRPDDAVVSTYRDHVHATSK 248 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GV ++MAEL G+ G SKG+GGSMHMFS ++ GG +G Q+ + G AF+ YRR Sbjct: 249 GVPVREVMAELFGKATGCSKGRGGSMHMFSKEHNMIGGFAFIGEQIPVALGYAFSAAYRR 308 Query: 179 ----------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 +D++ V GDG N GQ+YE+ NIAAL L +I+V+ENN +A+G + R Sbjct: 309 FAMGDKSDPKADQVAVCFLGDGTTNMGQLYEALNIAALSKLPIIFVVENNNWAIGMAAQR 368 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++A +R SF + G++VDGMD+ AV+ +A+ R +GP +IE LTYR+RGHS Sbjct: 369 STAIPAVWQRAESFGVAGVEVDGMDVLAVRGAARRAIDRARRGEGPTLIEALTYRFRGHS 428 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++DP R ++ E DPI+ + L +A++ + V+ +++++V+FA+ Sbjct: 429 VADPDEMRAVKQ-KEAWVVRDPIKSFEEELKRLGYANDETIAATRTKVKALVDDAVKFAE 487 Query: 349 SDKEPD 354 + +PD Sbjct: 488 TSPDPD 493 >gi|323138353|ref|ZP_08073424.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylocystis sp. ATCC 49242] gi|322396436|gb|EFX98966.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylocystis sp. ATCC 49242] Length = 328 Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 117/283 (41%), Positives = 169/283 (59%), Gaps = 1/283 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ IRRFE K +LY + GF HL G+EAV VG+ +LT D +I YREHG LA Sbjct: 19 MIRIRRFEAKCVELYQAQKILGFLHLYDGEEAVSVGVMEALTADDSVIATYREHGQALAR 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GVDA ++AE+ G+ G +G+GGSMH F + FYGG+ IVG + L G+A ++K + Sbjct: 79 GVDAGCLIAEMMGKLNGCCRGRGGSMHFFDRAHRFYGGNAIVGGGLPLALGVALSDKLSK 138 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 I FG+GA ++G+ +E+ N+A LW L ++++ ENN Y+MGT+V RA A T+F + Sbjct: 139 RTAITACFFGEGAVDEGEFHETLNLAKLWRLPILFICENNLYSMGTAVERAEADTDFVHK 198 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 + I G +VDGMD+ AV++ +AV RA P +E TYR+R HSM D YR++ Sbjct: 199 ASGYRIEGERVDGMDVVAVESAARRAVERVRAGSDPYFLECRTYRFRAHSMFDAQLYRSK 258 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 EE+ R PI + ++ L N ++ IE V I+ Sbjct: 259 EEVEAWRKK-GPIVRFQEWLESNHLIRPEEVHAIETKVEAEIS 300 >gi|62079564|gb|AAX61128.1| pyruvate dehydrogenase lipoamide alpha 1 [Oreochromis mossambicus] Length = 202 Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 115/206 (55%), Positives = 153/206 (74%), Gaps = 5/206 (2%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 ++ GI+KGKGGSMHM+ KN FYGG+GI+GAQV LG G+A A KY ++++CV +GDGA Sbjct: 1 QKSGIAKGKGGSMHMY-CKN-FYGGNGIIGAQVPLGAGVALACKYLGNNELCVCLYGDGA 58 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 ANQGQ++E++N+AALW L VI+V ENN+Y MGTSV RA+A T++ KRG F IPG+ VDG Sbjct: 59 ANQGQIFETYNMAALWKLPVIFVCENNRYGMGTSVERAAASTDYYKRG-EF-IPGLGVDG 116 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDP 310 MD+ V+ A +CR+ KGPI++E+ TYRY GHSMSDP +YRT EEI E+RS DP Sbjct: 117 MDVLCVREATRFAADHCRSGKGPILMELQTYRYHGHSMSDPGLSYRTCEEIREVRSKSDP 176 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNV 336 I ++ +L AS +LK I++ V Sbjct: 177 ISMLKDHMLSQNMASVEELKGIDVEV 202 >gi|125717965|ref|YP_001035098.1| pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Streptococcus sanguinis SK36] gi|125497882|gb|ABN44548.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit, putative [Streptococcus sanguinis SK36] gi|324991189|gb|EGC23123.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK353] gi|325696468|gb|EGD38358.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK160] Length = 357 Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 122/349 (34%), Positives = 192/349 (55%), Gaps = 2/349 (0%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEG--FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 L +S R ++ + VD+ + EV + +KE+ + Y+ M IR FEE + + Sbjct: 7 LPQQLSKTRNQSAVSELVDLKVYDATEVEVEQVSKEKAKTMYKTMWDIRNFEENTRRFFA 66 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G + GF HL G+EA+ G+ +LT+ D + + +R HGH +A G D +MAE+ G++ Sbjct: 67 AGQIPGFVHLYAGEEAIATGVCANLTDKDYITSTHRGHGHCVAKGGDLKGMMAEIFGKET 126 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ KGKGGSMH+ G G +G+VG L TG A NKY ++D + V FGDGAAN+ Sbjct: 127 GLGKGKGGSMHIADLDKGILGANGMVGGGFGLATGAAMRNKYLKTDSVAVCFFGDGAANE 186 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G +E N+A++W L VI+V ENN +A T +SA ++R ++N+PG++V+G D+ Sbjct: 187 GNFHECLNMASIWKLPVIFVNENNLFAESTPQWYSSASGTIAERAAAYNMPGVRVNGKDL 246 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV +AV R +GP +IE +TYR GH D Y+ E + ++ D ++ Sbjct: 247 FAVYQVAKEAVERARRGEGPTLIEAVTYRDHGHFEGDEQKYKALEGEEKDWADVDALDVF 306 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R + + +E +L I RK + +++FAQ P L D+ Sbjct: 307 RDYAIEHGLLTEEELDAILEESRKDVEEAIKFAQDSPIPRSESLLEDVF 355 >gi|325694537|gb|EGD36446.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK150] Length = 357 Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 122/349 (34%), Positives = 192/349 (55%), Gaps = 2/349 (0%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEG--FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 L +S R ++ + VD+ + EV + +KE+ + Y+ M IR FEE + + Sbjct: 7 LPQQLSKTRNQSAVSELVDLKVYDATEVEVEQVSKEKAKTMYKTMWDIRNFEENTRRFFA 66 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G + GF HL G+EA+ G+ +LT+ D + + +R HGH +A G D +MAE+ G++ Sbjct: 67 AGQIPGFVHLYAGEEAIATGVCANLTDKDYITSTHRGHGHCVAKGGDLKGMMAEIFGKET 126 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ KGKGGSMH+ G G +G+VG L TG A NKY ++D + V FGDGAAN+ Sbjct: 127 GLGKGKGGSMHIADLDKGILGANGMVGGGFGLATGAAMRNKYLKTDSVAVCFFGDGAANE 186 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G +E N+A++W L VI+V ENN +A T +SA ++R ++N+PG++V+G D+ Sbjct: 187 GNFHECLNMASIWKLPVIFVNENNLFAESTPQWYSSASGTIAERAAAYNMPGVRVNGKDL 246 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV +AV R +GP +IE +TYR GH D Y+ E + ++ D ++ Sbjct: 247 FAVYQVAKEAVERARRGEGPTLIEAVTYRDHGHFEGDEQKYKALEGEEKDWADVDALDVF 306 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R + + +E +L I RK + +++FAQ P L D+ Sbjct: 307 RDYAIEHGLLTEEELDAILEESRKDVEEAIKFAQDSPIPRTESLLEDVF 355 >gi|323351608|ref|ZP_08087262.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis VMC66] gi|322122094|gb|EFX93820.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis VMC66] Length = 357 Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 122/349 (34%), Positives = 192/349 (55%), Gaps = 2/349 (0%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEG--FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 L +S R ++ + VD+ + EV + +KE+ + Y+ M IR FEE + + Sbjct: 7 LPQQLSKTRNQSAVSELVDLKVYDATEVEVEQVSKEKAKTMYKTMWDIRNFEENTRRFFA 66 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G + GF HL G+EA+ G+ +LT+ D + + +R HGH +A G D +MAE+ G++ Sbjct: 67 AGQIPGFVHLYAGEEAIATGVCANLTDQDYITSTHRGHGHCVAKGGDLKGMMAEIFGKET 126 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ KGKGGSMH+ G G +G+VG L TG A NKY ++D + V FGDGAAN+ Sbjct: 127 GLGKGKGGSMHIADLDKGILGANGMVGGGFGLATGAAMRNKYLKTDSVAVCFFGDGAANE 186 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G +E N+A++W L VI+V ENN +A T +SA ++R ++N+PG++V+G D+ Sbjct: 187 GNFHECLNMASIWKLPVIFVNENNLFAESTPQWYSSASGTIAERAAAYNMPGVRVNGKDL 246 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV +AV R +GP +IE +TYR GH D Y+ E + ++ D ++ Sbjct: 247 FAVYQVAKEAVERARRGEGPTLIEAVTYRDHGHFEGDEQKYKALEGEEKDWADVDALDVF 306 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R + + +E +L I RK + +++FAQ P L D+ Sbjct: 307 RDYAIEHGLLTEEELDAILEESRKDVEEAIKFAQDSPIPRSESLLEDVF 355 >gi|328789284|ref|XP_003251259.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like [Apis mellifera] Length = 345 Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 126/308 (40%), Positives = 178/308 (57%), Gaps = 37/308 (12%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N++ L A + M IRR E KA ++Y + + GF HL IGQEA+ GMK ++++ D +IT Sbjct: 49 NEDDILYALKAMHYIRRIESKAAEMYRLRFIYGFLHLYIGQEAIATGMKPAISDKDTLIT 108 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR HG + G+ A I AEL GR+ G SKGKGGSMH++ K FY Sbjct: 109 SYRCHGFAVVFGISARDIFAELMGRKTGTSKGKGGSMHIYGDK--FY------------- 153 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 QGQ +E++N+A LW+L V+YV ENN+Y+MGT+ Sbjct: 154 ------------------GGEGIVGGQGQTFEAYNLAKLWSLPVVYVCENNKYSMGTATY 195 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R SA T++ RG IPG+QVDGM + V A Y KGPII+EM+TYRY GH Sbjct: 196 RHSANTDYYTRGDL--IPGIQVDGMKVLDVHEAAKFAKDYA-LRKGPIILEMVTYRYYGH 252 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YRTREE+ +++ DPI + K+++ N ++ +++EI N KI++ +E Sbjct: 253 SMSDPGTSYRTREEVKLVQAKQDPINWLTKQIIDNGLKTQAEVEEITKNTYKIVDEELEI 312 Query: 347 AQSDKEPD 354 A+ D PD Sbjct: 313 AKKDPSPD 320 >gi|108805206|ref|YP_645143.1| pyruvate dehydrogenase [Rubrobacter xylanophilus DSM 9941] gi|108766449|gb|ABG05331.1| Pyruvate dehydrogenase (lipoamide) [Rubrobacter xylanophilus DSM 9941] Length = 331 Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 122/319 (38%), Positives = 172/319 (53%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +EQ L AYR M IR FEE+ + G + GF HL G+EA+ G+ L E D + Sbjct: 9 ELGREQLLDAYRTMRTIREFEERLHVEFATGEIPGFVHLYAGEEAIAAGVCAHLDEDDYI 68 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D +M E+ G+ GI GKGGSMH+ G G +GIVG Sbjct: 69 ASTHRGHGHAIAKGCDVKAMMKEIYGKAEGICHGKGGSMHIADLDKGMLGANGIVGGGPP 128 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G + K R + ++ V GDG +NQG ES N+AA+W L ++V+ENN YA TS Sbjct: 129 LVCGAGLSAKVRGTRQVAVSFTGDGGSNQGTFLESLNLAAVWGLPCVFVVENNGYAEATS 188 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + + +KR F IPG+ VDG D AV +AV R GP +IE RY Sbjct: 189 TNFSVRGLDIAKRADGFGIPGVVVDGHDFFAVHEAAGEAVERARNGGGPTLIECKVNRYY 248 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR E+ E+R D + R+R++ E +L I+ VR +I+ +VE Sbjct: 249 GHFEGDAQTYRAPNEVEEIRREKDCLMLFRRRVVSAGLVEEEELDRIDDEVRNLIDEAVE 308 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ +P P EL +D+ + Sbjct: 309 EAKAAPDPSPEELLTDVYV 327 >gi|171779362|ref|ZP_02920326.1| hypothetical protein STRINF_01207 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281979|gb|EDT47410.1| hypothetical protein STRINF_01207 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 342 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 121/316 (38%), Positives = 182/316 (57%), Gaps = 2/316 (0%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E + Y M IR F+ + +L G V G H IG+EA VG LT D + + + Sbjct: 27 ELYMEMYLKMQRIREFDMRINKLVRRGFVQGMTHFSIGEEAASVGAMAHLTYDDIIFSNH 86 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG +L G Sbjct: 87 RGHGQCIAKDMDLNKMMAELAGKSTGVSKGRGGSMHLADFEKGNYGTNGIVGGGYALAVG 146 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 A Y+++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + ++ RA Sbjct: 147 AAITQDYQKTGNIVVAFSGDGATNEGSFHESVNLAATWKLPVIFYIINNRYGISMNIKRA 206 Query: 230 SAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + + R ++ IPG DG D+ AV TM KAV + R+ GP I+E+ +YR+ GHS Sbjct: 207 TNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVEHVRSGNGPAIVEVESYRWFGHS 266 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D YR++EE++E + DP+ + R L ++ AS +L I+ V K I+ + EFA+ Sbjct: 267 TADAGKYRSKEEVDEWKKK-DPLVKFRTYLTEHELASIAELDAIDAQVVKEIDEAYEFAK 325 Query: 349 SDKEPDPAELYSDILI 364 + PD + + D+ + Sbjct: 326 NSPAPDLSVAFEDVWV 341 >gi|107103667|ref|ZP_01367585.1| hypothetical protein PaerPA_01004737 [Pseudomonas aeruginosa PACS2] gi|254237034|ref|ZP_04930357.1| hypothetical protein PACG_03063 [Pseudomonas aeruginosa C3719] gi|296387292|ref|ZP_06876791.1| putative dehydrogenase E1 component [Pseudomonas aeruginosa PAb1] gi|313109598|ref|ZP_07795547.1| putative acetoin dehydrogenase E1 component [Pseudomonas aeruginosa 39016] gi|126168965|gb|EAZ54476.1| hypothetical protein PACG_03063 [Pseudomonas aeruginosa C3719] gi|310882049|gb|EFQ40643.1| putative acetoin dehydrogenase E1 component [Pseudomonas aeruginosa 39016] Length = 324 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 124/321 (38%), Positives = 184/321 (57%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S + +Q L AYR+M IR FEE+ + G + GF HL G+EA G+ L + D Sbjct: 1 MSTLSTDQLLHAYRVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLRDDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A GVD +MAE+ G++ G+ +GKGGSMH+ + G G +GIVGA Sbjct: 61 CIASTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCQGKGGSMHIADLEKGMLGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 L G A A K + SD + V FGDG +N+G V+E+ N+AA+WNL ++V ENN YA Sbjct: 121 APLAAGAALAAKLKGSDAVAVAFFGDGGSNEGAVFEAMNLAAVWNLPCLFVAENNGYAEA 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+ + + A + + R F +PG+ VDG D AV A+ RA +GP +IE+ R Sbjct: 181 TAANWSVACDHIADRAAGFGMPGVTVDGFDFFAVHEAAGAAIERARAGEGPSLIEVKLTR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 Y GH D YR +E+ R D ++Q R+R H S DL I+ V I ++ Sbjct: 241 YYGHFEGDAQTYRDPDEVKHYRETRDCLKQFRERTCHAGLLSASDLDAIDAEVEARIEDA 300 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V+ A++D +P+P +L D+ + Sbjct: 301 VQRAKNDPKPEPDDLLRDVYV 321 >gi|237786292|ref|YP_002906997.1| TPP-dependent acetoin dehydrogenase, E1 alpha- subunit [Corynebacterium kroppenstedtii DSM 44385] gi|237759204|gb|ACR18454.1| TPP-dependent acetoin dehydrogenase, E1 alpha- subunit [Corynebacterium kroppenstedtii DSM 44385] Length = 318 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 114/308 (37%), Positives = 176/308 (57%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M IR FE++ L+ G + GF HL G+EAV VG+ LTE D + + +R HGH Sbjct: 10 YNKMNDIRNFEDRVHGLFAKGEIPGFVHLYAGEEAVAVGVCAHLTEEDSITSTHRGHGHC 69 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G D +++MAE+ GR+ G+ GKGGSMH+ G G +G+VG +L TG A N+ Sbjct: 70 VAKGCDLNRMMAEIFGRKDGLCGGKGGSMHIADIDTGMLGANGMVGGGFALATGAALRNQ 129 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y +D + V FGDGA+N+G +E+ N+A +W L V++V ENN + T + A A Sbjct: 130 YLDTDAVAVCFFGDGASNEGVFHEALNMAGIWKLPVVFVCENNMFGEATPQNYACASETI 189 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 ++R ++++PG +DG ++ V + A+ R +GP +IE TYR GH D Y Sbjct: 190 AQRAAAYDMPGKVIDGKNVIEVYDEVGDAIKRARKGEGPSLIECRTYRKYGHFEGDEQAY 249 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 + E + ++ DPI + R+ + W S+ EIE K I++++EFA+ PDP Sbjct: 250 KATEGAEKEFADLDPIPRFREDAIEKGWLSKKKADEIEKASEKRIDDAIEFAEQSPIPDP 309 Query: 356 AELYSDIL 363 +L S++ Sbjct: 310 EDLLSNVF 317 >gi|24378645|ref|NP_720600.1| putative acetoin dehydrogenase (TPP-dependent), E1 component alpha subunit [Streptococcus mutans UA159] gi|24376504|gb|AAN57906.1|AE014864_4 putative acetoin dehydrogenase (TPP-dependent), E1 component alpha subunit [Streptococcus mutans UA159] Length = 331 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 118/322 (36%), Positives = 188/322 (58%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K+Q L + M IR + K +L G V G H +G+EA VG LT+ D Sbjct: 10 IAMLSKKQYLDMFLKMQRIRDVDTKLNKLVRRGFVQGMTHFSVGEEAASVGAIQGLTDQD 69 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + AEL G+ G SKG+GGSMH+ + + G YG +GIVG Sbjct: 70 IIFSNHRGHGQTIAKGIDIPAMFAELAGKATGSSKGRGGSMHLANLEKGNYGTNGIVGGG 129 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y + I V GD A N+G +ES N+AA+WNL VI+ I NN+Y + Sbjct: 130 YALAVGAALTQQYDNTGNIVVAFSGDSATNEGSFHESVNLAAVWNLPVIFFIINNRYGIS 189 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T ++ ++ ++ R ++ IPG V DG D+ AV M + + Y R+ GP ++E+ +Y Sbjct: 190 TDINYSTKISHLYLRADAYGIPGHYVEDGNDVIAVYEKMQEVIDYVRSGNGPALVEVESY 249 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE++ ++ DP+++ R L NK A++ +L IE V + I + Sbjct: 250 RWFGHSTADAGAYRTKEEVDAWKAK-DPLKKYRTYLTENKIATDEELDMIEKEVAQEIED 308 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 +V+FAQ EP+ + + D+ + Sbjct: 309 AVKFAQDSPEPELSVAFEDVWV 330 >gi|529561|gb|AAB58979.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Pseudomonas putida] gi|1093517|prf||2104227B acetoin dehydrogenase:SUBUNIT=alpha Length = 325 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 117/320 (36%), Positives = 180/320 (56%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ + EQ L AY +M IR FEE+ + G + GF HL G+EA G+ L + D Sbjct: 3 NQLSTEQLLHAYEVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLRDSDC 62 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ + G G +GIVGA Sbjct: 63 IASTHRGHGHCIAKGVDVYGMMAEIYGKKTGVCGGKGGSMHIADLEKGMLGANGIVGAGA 122 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K + D + V FGDGA+N+G V+E+ N+A++ NL I+V ENN YA T Sbjct: 123 PLVAGAALAAKIKGKDDVSVAFFGDGASNEGAVFEAMNMASIMNLPCIFVAENNGYAEAT 182 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + + A + + R F +PG+ +DG D AV A+ R+ +GP +IE+ RY Sbjct: 183 ASNWSVACDHIADRAAGFGMPGVTIDGFDFFAVYEAAGAAIERARSGQGPSLIEVKLSRY 242 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR +E+ +R + D + Q R + + L I+ + +I ++V Sbjct: 243 YGHFEGDAQTYRAPDEVKNLRESRDCLMQFRNKTTRAGLLTAEQLDAIDARIEDLIEDAV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 A+SD +P PA+L +D+ + Sbjct: 303 RRAKSDPKPQPADLLTDVYV 322 >gi|324992938|gb|EGC24858.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK405] gi|324994435|gb|EGC26348.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK678] gi|325687432|gb|EGD29453.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK72] gi|327462234|gb|EGF08561.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1] gi|327474254|gb|EGF19661.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK408] gi|327489589|gb|EGF21381.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1058] Length = 357 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 122/349 (34%), Positives = 192/349 (55%), Gaps = 2/349 (0%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEG--FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 L +S R ++ + VD+ + EV + +KE+ + Y+ M IR FEE + + Sbjct: 7 LPQQLSKTRNQSAVSELVDLKVYDATEVEVEQVSKEKAKTMYKTMWDIRNFEENTRRFFA 66 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G + GF HL G+EA+ G+ +LT+ D + + +R HGH +A G D +MAE+ G++ Sbjct: 67 AGQIPGFVHLYAGEEAIATGVCANLTDKDYITSTHRGHGHCVAKGGDLKGMMAEIFGKET 126 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ KGKGGSMH+ G G +G+VG L TG A NKY ++D + V FGDGAAN+ Sbjct: 127 GLGKGKGGSMHIADLDKGILGANGMVGGGFGLATGAAMRNKYLKTDSVAVCFFGDGAANE 186 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G +E N+A++W L VI+V ENN +A T +SA ++R ++N+PG++V+G D+ Sbjct: 187 GNFHECLNMASIWKLPVIFVNENNLFAESTPQWYSSASGTIAERAAAYNMPGVRVNGKDL 246 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV +AV R +GP +IE +TYR GH D Y+ E + ++ D ++ Sbjct: 247 FAVYQVAKEAVERARRGEGPTLIEAVTYRDHGHFEGDEQKYKALEGEEKDWADVDALDVF 306 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R + + +E +L I RK + +++FAQ P L D+ Sbjct: 307 RDYAIEHGLLTEEELDAILEESRKDVEEAIKFAQDSPIPRCESLLEDVF 355 >gi|315659762|ref|ZP_07912621.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Staphylococcus lugdunensis M23590] gi|315495050|gb|EFU83386.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Staphylococcus lugdunensis M23590] Length = 315 Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 117/317 (36%), Positives = 187/317 (58%), Gaps = 7/317 (2%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KEQ Y+ M IR FEEK +++ G + GF HL +G+EAV G+ L + D + + Sbjct: 3 KEQARWIYKTMNEIRYFEEKVHKIFSDGKIPGFVHLYVGEEAVATGVMSQLEDDDYITST 62 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV--GAQVSL 166 +R HGH +A G D + +MAE+ G++ G+ GKGGSMH+ G G +GIV G +++ Sbjct: 63 HRGHGHAIAKGCDLNGMMAEIMGKKTGLGHGKGGSMHVAEIDKGMLGANGIVSGGFGLAI 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GI+ N+ + + +C FGDGAAN+G +E N A++ NL VI+V ENNQ+ GT+ Sbjct: 123 GAGISIRNQQKENVAVCF--FGDGAANEGNFHEGLNFASILNLPVIFVCENNQFGEGTTH 180 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ASA ++R ++N+PG++VDGMD+ AV ++AVA + +GP +IE TYR G Sbjct: 181 DYASASETIAERASAYNMPGVRVDGMDVMAVLEATEEAVARAKKGEGPTLIECDTYRKYG 240 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D ++ ++ N ++ + E+ RK+++ W +E + +IE + + ++V++ Sbjct: 241 HFEGDEQKVKSPDDRN---ADKNATEEFRKQVIEEGWLTEDEADDIEKAAEQAVEDAVKY 297 Query: 347 AQSDKEPDPAELYSDIL 363 A PD LY D+ Sbjct: 298 ADDSDLPDVESLYKDVF 314 >gi|119387707|ref|YP_918741.1| pyruvate dehydrogenase (acetyl-transferring) [Paracoccus denitrificans PD1222] gi|119378282|gb|ABL73045.1| Pyruvate dehydrogenase (acetyl-transferring) [Paracoccus denitrificans PD1222] Length = 325 Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 122/316 (38%), Positives = 177/316 (56%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KEQ L AYR M IR FEE+ + G + GF HL G+EA VG+ M L + D++ + Sbjct: 9 KEQLLDAYRKMKTIRDFEERLHVDFARGEIPGFVHLYAGEEATAVGIMMHLHDRDRIAST 68 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R HGH +A GVD +MAE+ G+ G GKGGSMH+ G G +GI+GA L Sbjct: 69 HRGHGHCIAKGVDVKAMMAEIYGKATGCCAGKGGSMHIADLSLGMMGANGILGAGAPLVC 128 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G A A + D + + FGDGA+NQG V ES N+AA+WNL I+V+ENN YA TSV Sbjct: 129 GAALAAQKLGHDGVGITFFGDGASNQGTVLESMNLAAIWNLPAIFVVENNGYAESTSVDY 188 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 A+A ++ R F +PG+ VDG+D AV + + R GP ++E R+ GH Sbjct: 189 ATASDSYVDRATGFGMPGITVDGLDFFAVYEAAGEVIRRAREGAGPTLLECKNVRFFGHF 248 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 D Y+ E R+N+D ++ R+++ SE +L I+ V ++I+ +V A Sbjct: 249 EGDAQTYKAPGENEYNRANNDCLKLFRQKVTEAGVISESELDAIDAEVAQLIDEAVAEAI 308 Query: 349 SDKEPDPAELYSDILI 364 + P P +L +D+ + Sbjct: 309 AAPLPGPEQLTTDVYV 324 >gi|158423533|ref|YP_001524825.1| acetoin dehydrogenase complex E1 component alpha subunit [Azorhizobium caulinodans ORS 571] gi|158330422|dbj|BAF87907.1| acetoin dehydrogenase complex E1 component alpha subunit [Azorhizobium caulinodans ORS 571] Length = 327 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 121/318 (38%), Positives = 180/318 (56%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE+ L+AYR M IR FEE+ + G + GF HL G+EA G+ LT+ D++ Sbjct: 8 LSKEELLAAYRTMRTIRDFEERLHVEFAKGDIPGFVHLYAGEEACAAGIMTHLTDIDRIA 67 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A GVD ++MAE+ G+ G +GKGGSMH+ G G +GI+GA L Sbjct: 68 STHRGHGHCIAKGVDVHEMMAEIYGKATGACRGKGGSMHIADLAKGMMGANGILGAGAPL 127 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A A K+R + + FGDGA+NQG V ES N+AA+WNL VI+V+ENN YA TSV Sbjct: 128 ICGAALAAKFRGDGGVGITFFGDGASNQGTVLESMNLAAIWNLPVIFVVENNGYAESTSV 187 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + A+A ++ R F +PG+ VDG D AV + + R GP ++E R+ G Sbjct: 188 NYATAVDSYVDRAAGFGLPGVTVDGTDFFAVHEAAGEIIRRARTGGGPALLECKMVRFFG 247 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D Y+ + E + R+N D + R+ S+ +L I+ V +I+++V Sbjct: 248 HFEGDAQTYKAKGENDYNRANRDCLTLFAGRVTSAGVISDAELALIDREVATLIDDAVAS 307 Query: 347 AQSDKEPDPAELYSDILI 364 A++ P EL +D+ + Sbjct: 308 AKAAPLPAARELLTDVYV 325 >gi|73539372|ref|YP_299739.1| pyruvate dehydrogenase (lipoamide) [Ralstonia eutropha JMP134] gi|72122709|gb|AAZ64895.1| Pyruvate dehydrogenase (lipoamide) [Ralstonia eutropha JMP134] Length = 334 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 120/318 (37%), Positives = 179/318 (56%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE L+ YR M IR FEE+ +G G + GF HL G+EA VG+ L +GD++ Sbjct: 15 LDKETLLTVYRKMRTIREFEERLHVDFGRGDIPGFVHLYAGEEAAGVGILHHLHDGDRIA 74 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A GVD +M E+ G++GG GKGGSMH+ G G +GI+GA L Sbjct: 75 STHRGHGHCIAKGVDPVAMMKEIYGKKGGSCNGKGGSMHIADLSKGMMGANGILGAGAPL 134 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A A K+R ++ + GDGA+NQG ES N+AA+WNL VI+VIENN YA TS Sbjct: 135 ICGAALAAKFRGKGEVGITFSGDGASNQGTFLESLNLAAVWNLPVIFVIENNGYAESTSR 194 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +A ++ R F IPG+ VDG D AV + + R GP ++E R+ G Sbjct: 195 DYGTAVDSYVDRAAGFGIPGVTVDGTDFFAVHEAAGEVIRRAREGGGPSLLECKMVRFYG 254 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D YR E++++R+N D ++ + + S +L+ I+ V +I ++V+ Sbjct: 255 HFEGDAQTYRAAGELDDIRANKDCLKLFSRAVTQAGVVSREELESIDREVATLIEHAVQE 314 Query: 347 AQSDKEPDPAELYSDILI 364 A++ P P +L +D+ + Sbjct: 315 AKAAPLPGPEDLLTDVYV 332 >gi|168486434|ref|ZP_02710942.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus pneumoniae CDC1087-00] gi|168493089|ref|ZP_02717232.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus pneumoniae CDC3059-06] gi|183570498|gb|EDT91026.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus pneumoniae CDC1087-00] gi|183576646|gb|EDT97174.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus pneumoniae CDC3059-06] gi|332201636|gb|EGJ15706.1| dehydrogenase E1 component family protein [Streptococcus pneumoniae GA47368] Length = 322 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 183/320 (57%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ G ++IE +TY Sbjct: 181 ADIKKMTNIEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFQKAVDHVRSGNGSVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDI 319 >gi|332366667|gb|EGJ44409.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1059] Length = 357 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 121/349 (34%), Positives = 192/349 (55%), Gaps = 2/349 (0%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEG--FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 L +S R ++ + VD+ + EV + +KE+ + Y+ M IR FEE + + Sbjct: 7 LPQQLSKTRNQSAVSELVDLKVYDATEVEVEQVSKEKAKTMYKTMWDIRNFEENTRRFFA 66 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G + GF HL G+EA+ G+ +LT+ D + + +R HGH +A G D +MAE+ G++ Sbjct: 67 AGQIPGFVHLYAGEEAIATGVCANLTDQDYITSTHRGHGHCVAKGGDLKGMMAEIFGKET 126 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ KGKGGSMH+ G G +G+VG L TG A NKY ++D + V FGDGAAN+ Sbjct: 127 GLGKGKGGSMHIADLDKGILGANGMVGGGFGLATGAAMRNKYLKTDSVAVCFFGDGAANE 186 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G +E N+A++W L VI+V ENN +A T +SA ++R ++N+PG++V+G D+ Sbjct: 187 GNFHECLNMASIWKLPVIFVNENNLFAESTPQWYSSASGTIAERAAAYNMPGVRVNGKDL 246 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV +AV R+ +GP +IE +TYR GH D Y+ E + ++ D ++ Sbjct: 247 FAVYQVAKEAVERARSGEGPTLIEAVTYRDHGHFEGDEQKYKALEGEEKDWADVDALDVF 306 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + + +E +L I RK + +++FAQ P L D+ Sbjct: 307 HDYAIEHGLLTEEELDAILEESRKDVEEAIKFAQDSPIPRSESLLEDVF 355 >gi|329117246|ref|ZP_08245963.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus parauberis NCFD 2020] gi|326907651|gb|EGE54565.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus parauberis NCFD 2020] Length = 322 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 118/318 (37%), Positives = 185/318 (58%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +KE+ L + M IR F+ + +L G V G H +G+EA VG LT D + + Sbjct: 5 SKEKHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLTYDDIIFS 64 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG +L Sbjct: 65 NHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADIEKGNYGTNGIVGGGYALA 124 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + +++ Sbjct: 125 VGAALTQQYKGTNNIAVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGISMNIN 184 Query: 228 RASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A+ + R ++ IPG DG D+ AV TM+KAV + R GP I+E+ +YR+ G Sbjct: 185 NATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMEKAVEHVRGGNGPAIVEVESYRWFG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS +D YRT+EE+ + DP+ + R L ++ +L I+ V+K I+++ EF Sbjct: 245 HSTADAGKYRTKEEVASWKEK-DPMIKYRTYLTKEGIVTDEELDAIQEQVKKEIDDAYEF 303 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ +P+ + + D+ + Sbjct: 304 AQNSPDPELSVAFEDVWV 321 >gi|239636100|ref|ZP_04677114.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus warneri L37603] gi|239598371|gb|EEQ80854.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus warneri L37603] Length = 317 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 120/316 (37%), Positives = 183/316 (57%), Gaps = 5/316 (1%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KEQ Y+ M IR FEEK +++ G + GF HL +G+EAV G+ MSL E D IT+ Sbjct: 5 KEQARWIYKTMNEIRYFEEKVHKIFSDGQIPGFVHLYVGEEAVATGV-MSLLEDDDYITS 63 Query: 109 -YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A G D + +M E+ G++ G+ GKGGSMH+ G G +GIV L Sbjct: 64 THRGHGHAIAKGCDLNGMMTEIMGKKDGLGHGKGGSMHVAEIDKGMLGANGIVSGGFGLA 123 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG + + ++ + + V FGDGAAN+G +E N A++ NL VI+V ENNQ+A GT+ Sbjct: 124 TGAGISIRNQKKENVAVCFFGDGAANEGNFHEGLNFASILNLPVIFVCENNQFAEGTTHD 183 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 ASA ++R ++N+PG++VDGMD+ V+ +AV + +GP +IE TYR GH Sbjct: 184 YASASETIAERAKAYNMPGVRVDGMDVIEVRNAAKEAVERAKNGEGPTLIECDTYRKYGH 243 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 D ++ N+ ++ + E+ RK ++ W +E + EIE + + +SV +A Sbjct: 244 FEGDEQKVKSP---NDRNADKNATEEFRKVAINEGWLTEEEATEIEQAAEQAVEDSVAYA 300 Query: 348 QSDKEPDPAELYSDIL 363 + + PD LY D+ Sbjct: 301 EQSELPDVESLYKDVF 316 >gi|116052186|ref|YP_788970.1| putative dehydrogenase E1 component [Pseudomonas aeruginosa UCBPP-PA14] gi|115587407|gb|ABJ13422.1| putative acetoin dehydrogenase E1 component [Pseudomonas aeruginosa UCBPP-PA14] Length = 324 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 124/321 (38%), Positives = 183/321 (57%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S + +Q L AYR+M IR FEE+ + G + GF HL G+EA G+ L D Sbjct: 1 MSTLSTDQLLHAYRVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLRNDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A GVD +MAE+ G++ G+ +GKGGSMH+ + G G +GIVGA Sbjct: 61 CIASTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCQGKGGSMHIADLEKGMLGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 L G A A K + SD + V FGDG +N+G V+E+ N+AA+WNL ++V ENN YA Sbjct: 121 APLAAGAALAAKLKGSDAVAVAFFGDGGSNEGAVFEAMNLAAVWNLPCLFVAENNGYAEA 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+ + + A + + R F +PG+ VDG D AV A+ RA +GP +IE+ R Sbjct: 181 TAANWSVACDHIADRAAGFGMPGVTVDGFDFFAVHEAAGAAIERARAGEGPSLIEVKLTR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 Y GH D YR +E+ R D ++Q R+R H S DL I+ V I ++ Sbjct: 241 YYGHFEGDAQTYRDPDEVKHYRETRDCLKQFRERTCHAGLLSASDLDAIDAEVEARIEDA 300 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V+ A++D +P+P +L D+ + Sbjct: 301 VQRAKNDPKPEPDDLLRDVYV 321 >gi|152992563|ref|YP_001358284.1| pyruvate/2-oxoglutarate dehydrogenase complex, E1 component, alpha subunit [Sulfurovum sp. NBC37-1] gi|151424424|dbj|BAF71927.1| pyruvate/2-oxoglutarate dehydrogenase complex, E1 component, alpha subunit [Sulfurovum sp. NBC37-1] Length = 321 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 123/308 (39%), Positives = 179/308 (58%), Gaps = 3/308 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y MLL R FE A + Y G + GF HL IGQE V + +GD + T YREH Sbjct: 10 YYDMLLGRAFELAAKEHYMAGDIAGFLHLDIGQEGFSVSAMKAFDKGD-VFTTYREHVMA 68 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G+D +MAEL G+ G+S+G+GGSMH+F + FYGG IVG Q+ G A+A K Sbjct: 69 IARGMDPKAVMAELFGKAAGVSRGRGGSMHLFDPSHFFYGGDAIVGGQIPNAVGCAYARK 128 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + + +V FGDGA N G +ES N A+ L ++++ ENN YA+GT ++R +A Sbjct: 129 FLGQEDGVMVVFGDGATNGGAFFESLNNASAQKLPLLFLCENNGYAIGTKITRVAAFEKQ 188 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 +K+ + + M+VDGMD AV + +A + GPI +E +T RY GHSMSDP Y Sbjct: 189 AKKAEPY-MQTMEVDGMDAIAVYEAVKEAQRLIQDGHGPIFLEAMTCRYEGHSMSDPGTY 247 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R++EE++ ++ DPIE++ L N G L+ ++ + +++ +V FA EP Sbjct: 248 RSKEELDICKAK-DPIERMEAVLQTNYGLDAGQLEALQKKAQAVVDEAVAFAADAPEPGL 306 Query: 356 AELYSDIL 363 ELY+DI Sbjct: 307 EELYADIF 314 >gi|257867138|ref|ZP_05646791.1| acetoin dehydrogenase subunit alpha [Enterococcus casseliflavus EC30] gi|257873472|ref|ZP_05653125.1| acetoin dehydrogenase subunit alpha [Enterococcus casseliflavus EC10] gi|257801194|gb|EEV30124.1| acetoin dehydrogenase subunit alpha [Enterococcus casseliflavus EC30] gi|257807636|gb|EEV36458.1| acetoin dehydrogenase subunit alpha [Enterococcus casseliflavus EC10] Length = 333 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 109/304 (35%), Positives = 178/304 (58%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M IR F+EK +L+ G++ G HL +GQEA G L + D + + +R HGH LA Sbjct: 27 MWEIRFFDEKVDELFARGLIHGTTHLAVGQEATAAGSSAVLKKTDWITSTHRGHGHTLAK 86 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G + +++MAEL GR G +KGKGGSMH+ G G +GIVG + G A +K ++ Sbjct: 87 GTNVNEMMAELFGRTTGTNKGKGGSMHIADLDTGNLGANGIVGGGFPIAVGAALTSKMKK 146 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + ++ + GDG+ N+G +E+ N+A++W+L V++ IENN+Y M SV + + S+R Sbjct: 147 TKQVALSYGGDGSTNEGSFHEAVNLASIWDLPVVFFIENNKYGMSGSVEKMTNIPQLSER 206 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 ++ I G+ +DG ++ V T +AV R +GP +IE +TYR++GHS SD YRT+ Sbjct: 207 AKAYGIEGITIDGNNLIEVIETTYQAVEKARRGEGPTLIEAMTYRWKGHSKSDAKKYRTK 266 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +E + R DPI+Q + L+ +E + +EI ++ IN++V F ++ + Sbjct: 267 QEEEQWRKEKDPIQQAKTTLIAAGIFTEEEAEEIRKKAKQAINDAVTFGENSPVVAVETM 326 Query: 359 YSDI 362 + D+ Sbjct: 327 FEDV 330 >gi|163759858|ref|ZP_02166942.1| Pyruvate dehydrogenase (lipoamide) [Hoeflea phototrophica DFL-43] gi|162282816|gb|EDQ33103.1| Pyruvate dehydrogenase (lipoamide) [Hoeflea phototrophica DFL-43] Length = 335 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 121/316 (38%), Positives = 179/316 (56%), Gaps = 3/316 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ N E L YR M+ IR FE+ A QLY + G H+ G+EAV VG+ +L D+ Sbjct: 14 AKHNTEDFLRMYRQMVRIRTFEDNANQLYLSAKMPGLTHMYSGEEAVAVGICEALKVTDK 73 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D ++ EL G++ G +GKGGSMH+ NG G + IVG + Sbjct: 74 ITSTHRGHGHCVAKGADFKEMFCELLGKEEGYCRGKGGSMHIADQSNGNLGANAIVGGSM 133 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + TG AF K D + V FGDGA QG +YE N+AALWNL +IY ENN Y+ T Sbjct: 134 GIATGAAFTAKLLGKDDVTVCFFGDGATAQGLMYEVMNMAALWNLPIIYACENNGYSEYT 193 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + +A + + R +F I VDG D+ AV + ++ V CR +GP +E++TYRY Sbjct: 194 KTAEIAAGS-ITGRAEAFGIEAHTVDGQDVLAVNSLTEQLVERCRKGEGPFFMELMTYRY 252 Query: 285 RGHSMSDPAN--YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 GH + D YR+++E + R N DPI Q + L A+E +L+ ++ ++ Sbjct: 253 HGHHVGDINREYYRSKDEEKDWRENKDPITQFARHLTSEGIATEEELEAMQAEIKADATA 312 Query: 343 SVEFAQSDKEPDPAEL 358 +VE+A K PD +E+ Sbjct: 313 AVEYALKAKYPDASEV 328 >gi|15599345|ref|NP_252839.1| dehydrogenase E1 component [Pseudomonas aeruginosa PAO1] gi|9950356|gb|AAG07537.1|AE004831_9 probable dehydrogenase E1 component [Pseudomonas aeruginosa PAO1] Length = 324 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 123/321 (38%), Positives = 184/321 (57%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S + +Q L AYR+M IR FEE+ + G + GF HL G+EA G+ L + D Sbjct: 1 MSTLSTDQLLHAYRVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLRDDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A GVD +MAE+ G++ G+ +GKGGSMH+ + G G +GIVGA Sbjct: 61 CIASTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCQGKGGSMHIADLEKGMLGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 L G A A K + SD + V FGDG +N+G V+E+ N+A++WNL ++V ENN YA Sbjct: 121 APLAAGAALAAKLKGSDAVAVAFFGDGGSNEGAVFEAMNLASVWNLPCLFVAENNGYAEA 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+ + + A + + R F +PG+ VDG D AV A+ RA +GP +IE+ R Sbjct: 181 TAANWSVACDHIADRAAGFGMPGVTVDGFDFFAVHEAAGAAIERARAGEGPSLIEVKLTR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 Y GH D YR +E+ R D ++Q R+R H S DL I+ V I ++ Sbjct: 241 YYGHFEGDAQTYRDPDEVKHYRETRDCLKQFRERTCHAGLLSASDLDAIDAEVEARIEDA 300 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V+ A++D +P+P +L D+ + Sbjct: 301 VQRAKNDPKPEPDDLLRDVYV 321 >gi|289549601|ref|YP_003470505.1| Acetoin dehydrogenase E1 component alpha-subunit [Staphylococcus lugdunensis HKU09-01] gi|289179133|gb|ADC86378.1| Acetoin dehydrogenase E1 component alpha-subunit [Staphylococcus lugdunensis HKU09-01] Length = 315 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 117/317 (36%), Positives = 186/317 (58%), Gaps = 7/317 (2%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KEQ Y+ M IR FEEK +++ G + GF HL +G+EAV G+ L + D + + Sbjct: 3 KEQARWIYKTMNEIRYFEEKVHKIFSDGKIPGFVHLYVGEEAVATGVMSQLEDDDYITST 62 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV--GAQVSL 166 +R HGH +A G D + +MAE+ G++ G+ GKGGSMH+ G G +GIV G +++ Sbjct: 63 HRGHGHAIAKGCDLNGMMAEIMGKKTGLGHGKGGSMHVAEIDKGMLGANGIVSGGFGLAI 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GI+ N+ + + +C FGDGAAN+G +E N A++ NL VI+V ENNQ+ GT+ Sbjct: 123 GAGISIRNQQKENVAVCF--FGDGAANEGNFHEGLNFASILNLPVIFVCENNQFGEGTTH 180 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ASA ++R ++N+PG++VDGMD+ AV ++AVA + +GP +IE TYR G Sbjct: 181 DYASASETIAERASAYNMPGVRVDGMDVMAVLEATEEAVARAKKGEGPTLIECDTYRKYG 240 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D ++ ++ N ++ + E+ RK+ + W +E + +IE + + ++V++ Sbjct: 241 HFEGDEQKVKSPDDRN---ADKNATEEFRKQAIEEGWLTEDEADDIEKAAEQAVEDAVKY 297 Query: 347 AQSDKEPDPAELYSDIL 363 A PD LY D+ Sbjct: 298 ADDSDLPDVESLYKDVF 314 >gi|116694104|ref|YP_728315.1| acetoin dehydrogenase E1 component alpha-subunit [Ralstonia eutropha H16] gi|113136|sp|P27745|ACOA_RALEH RecName: Full=Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha; Short=Acetoin:DCPIP oxidoreductase-alpha; Short=Ao:DCPIP OR gi|141894|gb|AAA21948.1| acetoin:DCPIP oxidoreductase-alpha [Ralstonia eutropha H16] gi|113528603|emb|CAJ94950.1| acetoin dehydrogenase E1 component alpha-subunit [Ralstonia eutropha H16] Length = 333 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 119/318 (37%), Positives = 179/318 (56%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE L+ YR M IR FEE+ +G G + GF HL G+EA VG+ L +GD++ Sbjct: 14 LDKETLLTVYRKMRTIRDFEERLHVDFGRGDIPGFVHLYAGEEAAGVGILHHLNDGDRIA 73 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A GVD +M E+ G++GG GKGGSMH+ G G +GI+GA L Sbjct: 74 STHRGHGHCIAKGVDPVAMMKEIYGKKGGSCNGKGGSMHIADLSKGMMGANGILGAGAPL 133 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A A K+R ++ + GDGA+NQG ES N+AA+WNL VI+VIENN YA TS Sbjct: 134 ICGAALAAKFRGKGEVGITFCGDGASNQGTFLESLNLAAVWNLPVIFVIENNGYAESTSR 193 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +A ++ R F IPG+ VDG D AV + + R GP ++E R+ G Sbjct: 194 DYGTAVDSYVDRAAGFGIPGVTVDGTDFFAVHEAAGEVIRRAREGGGPSLLECKMVRFYG 253 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D YR E++++R+N D ++ + + + +L I+ V +I ++V+ Sbjct: 254 HFEGDAQTYRAAGELDDIRANKDCLKLFGRAVTQAGVVAREELDTIDREVAALIEHAVQE 313 Query: 347 AQSDKEPDPAELYSDILI 364 A++ +P P +L +D+ + Sbjct: 314 AKAAPQPGPEDLLTDVYV 331 >gi|221633780|ref|YP_002523006.1| TPP-dependent acetoin dehydrogenase subunit alpha [Thermomicrobium roseum DSM 5159] gi|221156798|gb|ACM05925.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Thermomicrobium roseum DSM 5159] Length = 345 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 130/325 (40%), Positives = 177/325 (54%), Gaps = 12/325 (3%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF----------CHLCIGQEAVI 92 E + + E+ L+AYR M LIR FEE Y +G F HL +GQEAV Sbjct: 16 EKAGLSPEKLLAAYRQMCLIRSFEETIADRYYIGKTPQFNMAAGPIRGEMHLAVGQEAVA 75 Query: 93 VGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG 152 VG+ M L E D +++ +R H H LA GV A K+ AE+ G+ G+ +GKGG MH+F ++ Sbjct: 76 VGVGMHLREPDAVVSTHRPHHHALAKGVPADKLAAEIFGKVTGLCRGKGGHMHLFDAEHR 135 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GIVGA G AFA ++R + V G+GAAN G + E+ N A LW L ++ Sbjct: 136 F-SCSGIVGASFPQAAGAAFAFRHRGEPHVAVAFAGEGAANHGTLAETLNAAVLWRLPLV 194 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 VIE+N YA T +A AQ + +R + FN+P VDGMD+ V AV RA Sbjct: 195 IVIEDNMYADSTPKWQALAQPHQFQRALGFNVPSYLVDGMDLIDVWRAAKDAVERARAGY 254 Query: 273 GPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 GP +IE + YRYRGH D YRTREE+ R DPI ++ +RL WA + L+ + Sbjct: 255 GPSLIEAVCYRYRGHFEGDGEEYRTREEVERWR-QLDPIPRLAERLKRLGWADDTTLERL 313 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAE 357 + + +V FA+ PDP E Sbjct: 314 RREAEEEVARAVAFAEQSPLPDPQE 338 >gi|325689733|gb|EGD31737.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK115] Length = 357 Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 117/321 (36%), Positives = 181/321 (56%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 EV + +KE+ + Y+ M IR FEE + + G + GF HL G+EA+ G+ +LT+ Sbjct: 35 EVEQISKEKAKTMYKTMWDIRNFEENTRRFFAAGQIPGFVHLYAGEEAIATGVCANLTDQ 94 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HGH +A G D +MAE+ G++ G+ KGKGGSMH+ G G +G+VG Sbjct: 95 DYITSTHRGHGHCVAKGGDLKGMMAEIFGKETGLGKGKGGSMHIADLDKGILGANGMVGG 154 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 L TG A NKY ++D + V FGDGAAN+G +E N+A++W L VI+V ENN +A Sbjct: 155 GFGLATGAAMRNKYLKTDSVAVCFFGDGAANEGNFHECLNMASIWKLPVIFVNENNLFAE 214 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T +SA ++R ++N+PG++V+G D+ AV +AV R +GP +IE +TY Sbjct: 215 STPQWYSSASGTIAERAAAYNMPGVRVNGKDLFAVYQVAKEAVERARRGEGPTLIEAVTY 274 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D Y+ E + ++ D ++ R + + +E +L I RK + Sbjct: 275 RDHGHFEGDEQKYKALEGEEKDWADVDALDIFRDYAIEHGLLTEEELDAILEESRKDVEE 334 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 +++FAQ P L D+ Sbjct: 335 AIKFAQDSPIPRSESLLEDVF 355 >gi|218889521|ref|YP_002438385.1| putative dehydrogenase E1 component [Pseudomonas aeruginosa LESB58] gi|218769744|emb|CAW25504.1| probable dehydrogenase E1 component [Pseudomonas aeruginosa LESB58] Length = 324 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 122/321 (38%), Positives = 184/321 (57%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S + +Q L AYR+M IR FEE+ + G + GF HL G+EA G+ L + D Sbjct: 1 MSTLSTDQLLHAYRVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLRDDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A GVD +MAE+ G++ G+ +GKGGSMH+ + G G +GIVGA Sbjct: 61 CIASTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCQGKGGSMHIADLEKGMLGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 L G A A K + SD + V FGDG +N+G V+E+ N+A++WNL ++V ENN YA Sbjct: 121 APLAAGAALAAKLKGSDAVAVAFFGDGGSNEGAVFEAMNLASVWNLPCLFVAENNGYAEA 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+ + + A + + R F +PG+ VDG D AV A+ RA +GP +IE+ R Sbjct: 181 TAANWSVACDHIADRAAGFGMPGVTVDGFDFFAVHEAAGAAIERARAGEGPSLIEVKLTR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 Y GH D YR +E+ R D ++Q R+R H S DL I+ + I ++ Sbjct: 241 YYGHFEGDAQTYRDPDEVKHYRETRDCLKQFRERTCHAGLLSASDLDAIDAEIEARIEDA 300 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V+ A++D +P+P +L D+ + Sbjct: 301 VQRAKNDPKPEPDDLLRDVYV 321 >gi|330684430|gb|EGG96154.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Staphylococcus epidermidis VCU121] Length = 317 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 120/316 (37%), Positives = 184/316 (58%), Gaps = 5/316 (1%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KEQ Y+ M IR FEEK +++ G + GF HL +G+EAV G+ MSL E D IT+ Sbjct: 5 KEQARWIYKTMNEIRYFEEKVHKIFSDGQIPGFVHLYVGEEAVATGV-MSLLEDDDYITS 63 Query: 109 -YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A G D + +MAE+ G++ G+ GKGGSMH+ G G +GIV L Sbjct: 64 THRGHGHAIAKGCDLNGMMAEIMGKKDGLGHGKGGSMHVAEIDKGMLGANGIVSGGFGLA 123 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG + + ++ + + V FGDGAAN+G +E N A++ NL VI+V ENNQ+A GT+ Sbjct: 124 TGAGISIRNQKKENVAVCFFGDGAANEGNFHEGLNFASILNLPVIFVCENNQFAEGTTHD 183 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 ASA ++R ++N+PG++VDGMD+ V+ +AV + +GP +IE TYR GH Sbjct: 184 YASASETIAERAKAYNMPGVRVDGMDVIEVRNAAKEAVERAKNGEGPTLIECDTYRKYGH 243 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 D ++ N+ ++ + E+ RK ++ W +E + +IE + + +SV +A Sbjct: 244 FEGDEQKVKSP---NDRNADKNATEEFRKVAINEGWLTEEEATKIEQAAEQAVEDSVVYA 300 Query: 348 QSDKEPDPAELYSDIL 363 + + PD LY D+ Sbjct: 301 EQSELPDVESLYKDVF 316 >gi|228475561|ref|ZP_04060279.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus hominis SK119] gi|228270343|gb|EEK11778.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus hominis SK119] Length = 317 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 116/315 (36%), Positives = 180/315 (57%), Gaps = 3/315 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KEQ Y+ M IR FEEK +++ G + GF HL +G+EAV G+ LT+ D + + Sbjct: 5 KEQARWIYKTMNEIRFFEEKVHKIFSDGQIPGFVHLYVGEEAVATGVMSQLTDDDYITST 64 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R HGH +A G D + +MAE+ G++ G+ GKGGSMH+ G G +GIVG L Sbjct: 65 HRGHGHAIAKGCDLNGMMAEIMGKRDGLGHGKGGSMHVAEIDKGMLGANGIVGGGFGLAI 124 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G + + + D + V FGDGAAN+G +E N A++ NL VI+V ENNQ+A GT+ Sbjct: 125 GASISIINQGKDNVAVCFFGDGAANEGTFHEGLNFASILNLPVIFVCENNQFAEGTTHDY 184 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASA ++R ++N+PG++VDGMD+ V +AV + +GP +IE TYR GH Sbjct: 185 ASASETIAERAAAYNMPGVRVDGMDVLEVYKATQEAVDRAKKGEGPTLIECDTYRKYGHF 244 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 D ++ ++ N ++ + + RK+ + W +E + +IE + + ++V+FA Sbjct: 245 EGDEQKVKSPDDRN---ADKNATVEFRKQAIEEGWLTEEEADDIENTAEQAVEDAVKFAD 301 Query: 349 SDKEPDPAELYSDIL 363 + PD LY D+ Sbjct: 302 ESELPDEDSLYKDVF 316 >gi|56698609|ref|YP_168986.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Ruegeria pomeroyi DSS-3] gi|56680346|gb|AAV97012.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Ruegeria pomeroyi DSS-3] Length = 326 Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 123/318 (38%), Positives = 173/318 (54%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 K+ L AYR M IR FEE+ +G G + GF HL G+EA VG+ M L + D++ Sbjct: 7 LEKDGLLEAYRRMKTIREFEERLHVDFGRGDIPGFVHLYAGEEAAGVGIMMHLKDLDRIA 66 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A GVD +MAE+ G+ G GKGGSMH+ G G +GI+GA L Sbjct: 67 STHRGHGHCIAKGVDVKGMMAEIYGKSTGSCAGKGGSMHIADLSKGMMGANGILGAGAPL 126 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A A + D + + FGDGA+NQG V ES N+AA+WNL I+V+ENN YA TSV Sbjct: 127 VCGAALAAQKLGHDGVGITFFGDGASNQGTVLESMNLAAIWNLPAIFVVENNGYAESTSV 186 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A A ++ R F +PG+ VDG D AV + V R GP ++E R+ G Sbjct: 187 DYAVASDSYVDRATGFGMPGITVDGTDFFAVYEAAGEVVKRAREGGGPTLLECKMIRFFG 246 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D YR E + R N D ++ R ++ + +L I+ V +I ++V Sbjct: 247 HFEGDAQTYRAPGENEDNRKNRDCLKIFRAKVTEAGVLTNAELDAIDAEVATLIEDAVRE 306 Query: 347 AQSDKEPDPAELYSDILI 364 A++ P PAEL +D+ + Sbjct: 307 AKAAPLPTPAELTTDVYV 324 >gi|33591825|ref|NP_879469.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Bordetella pertussis Tohama I] gi|33571468|emb|CAE44955.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Bordetella pertussis Tohama I] gi|332381242|gb|AEE66089.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Bordetella pertussis CS] Length = 323 Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 121/306 (39%), Positives = 179/306 (58%), Gaps = 3/306 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 NKEQ L AY+ ML IR E + G+L+ G V GF HL +GQEAV M M L D + + Sbjct: 5 NKEQLLDAYQRMLGIRLVELRLGRLFADGEVPGFIHLSVGQEAVAAAMGMVLRPDDTVAS 64 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH LA G+D EL R+ GI KG+GGSMH+ + G G + IVGA + + Sbjct: 65 THRGHGHALAKGIDMDDFFLELMAREEGICKGRGGSMHVANMSIGMLGANAIVGASIPIA 124 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A A++ R++D + V FGDGA +G ++ES N+AALW L ++++ ENN +A S + Sbjct: 125 LGSALAHQVRKTDALAVAFFGDGAMAEGGLHESLNLAALWQLPLLFLCENNGWAE-FSPT 183 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 K +F+IP +VDG D+ AV AVA RA KGP ++E +T+R+RGH Sbjct: 184 HKQFVAPLDKLSAAFSIPHAKVDGNDVLAVMDAAQAAVADIRAGKGPRVLECITHRWRGH 243 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 DP YR +EI+ + HDP+ + + +L +K S+ +++ V+ ++ +VE A Sbjct: 244 YEGDPQKYRDSDEISGL-DEHDPVARF-EAVLDSKGVSQAQRQKVRDAVQAQVDQAVERA 301 Query: 348 QSDKEP 353 + + P Sbjct: 302 RKGRPP 307 >gi|327460391|gb|EGF06728.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1057] Length = 357 Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 118/321 (36%), Positives = 180/321 (56%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 EV + +KE+ Y+ M IR FEE + + G + GF HL G+EA+ G+ +LT+ Sbjct: 35 EVEQISKEKAKIMYKTMWDIRNFEENTRRFFAAGQIPGFVHLYAGEEAIATGVCANLTDQ 94 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HGH +A G D +MAE+ G++ G+ KGKGGSMH+ G G +G+VG Sbjct: 95 DYITSTHRGHGHCVAKGGDLKGMMAEIFGKETGLGKGKGGSMHIADLDKGILGANGMVGG 154 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 L TG A NKY ++D + V FGDGAAN+G +E N+AA+W L VI+V ENN +A Sbjct: 155 GFGLATGAAMRNKYLKTDSVAVCFFGDGAANEGNFHECLNMAAIWKLPVIFVNENNFFAE 214 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T +SA ++R ++N+PG++V+G D+ AV +AV R +GP +IE +TY Sbjct: 215 STPQWYSSASGTIAERAAAYNMPGVRVNGKDLFAVYQVAKEAVERARRGEGPTLIEAVTY 274 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D Y+ E + ++ D ++ R + + +E +L I RK + Sbjct: 275 RDHGHFEGDEQKYKALEGEEKDWADVDALDVFRDYAIEHGLLTEEELDAILEESRKDVEE 334 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 +++FAQ P L D+ Sbjct: 335 AIKFAQDSPIPRSESLLEDVF 355 >gi|120402419|ref|YP_952248.1| pyruvate dehydrogenase [Mycobacterium vanbaalenii PYR-1] gi|119955237|gb|ABM12242.1| Pyruvate dehydrogenase (acetyl-transferring) [Mycobacterium vanbaalenii PYR-1] Length = 323 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 116/305 (38%), Positives = 177/305 (58%), Gaps = 1/305 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ +RR EEK +LY + GF HL +G+EAV G +L D ++ YREH H L Sbjct: 13 MIRVRRMEEKCAELYSESKIRGFLHLYVGEEAVAAGSLRALGPDDAVVATYREHAHALLR 72 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GV + IMAE+ G+ G S+G+GGSMH+F FYGG+ IV + L G+A A+ ++ Sbjct: 73 GVPMTSIMAEMFGKVQGCSRGRGGSMHLFDADRRFYGGNAIVSGGLPLAAGLALADAHQG 132 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 +++ FG+GA +G +ES N+A LW L V++ ENN YAMGT++ R +QT+ + + Sbjct: 133 RNRVTACYFGEGAVAEGAFHESLNMAVLWRLPVLFCCENNLYAMGTALRRELSQTDLTVK 192 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 ++N+P + VDGMD+ A + +AV + R GP +E TYR+R HSM DP YR + Sbjct: 193 AAAYNVPTLAVDGMDVAACQFAAQEAVEHIRRGGGPFFVEFRTYRFRAHSMFDPELYRDK 252 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 E+ + R DPI R + D+ IE +V ++++V +A++ D +L Sbjct: 253 AEVEQWR-QRDPIAMFTDRCTGEGLLAPEDVAAIEESVGVELSDAVAYAEAGTWEDVEDL 311 Query: 359 YSDIL 363 D+L Sbjct: 312 ERDVL 316 >gi|314935314|ref|ZP_07842667.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Staphylococcus hominis subsp. hominis C80] gi|313656649|gb|EFS20388.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Staphylococcus hominis subsp. hominis C80] Length = 317 Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 116/315 (36%), Positives = 180/315 (57%), Gaps = 3/315 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KEQ Y+ M IR FEEK +++ G + GF HL +G+EAV G+ LT+ D + + Sbjct: 5 KEQARWIYKTMNEIRFFEEKVHKIFSDGQIPGFVHLYVGEEAVATGVMSQLTDDDYITST 64 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R HGH +A G D + +MAE+ G++ G+ GKGGSMH+ G G +GIVG L Sbjct: 65 HRGHGHAIAKGCDLNGMMAEIMGKRDGLGHGKGGSMHVAEIDKGMLGANGIVGGGFGLAI 124 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G + + + D + V FGDGAAN+G +E N A++ NL VI+V ENNQ+A GT+ Sbjct: 125 GASISIINQGKDNVAVCFFGDGAANEGTFHEGLNFASILNLPVIFVCENNQFAEGTTHDY 184 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASA ++R ++N+PG++VDGMD+ V +AV + +GP +IE TYR GH Sbjct: 185 ASASETIAERASAYNMPGVRVDGMDVLEVYKATQEAVDRAKKGEGPTLIECDTYRKYGHF 244 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 D ++ ++ N ++ + + RK+ + W +E + +IE + + ++V+FA Sbjct: 245 EGDEQKVKSPDDRN---ADKNATVEFRKQAIEEGWLTEEEADDIENTAEQAVEDAVKFAD 301 Query: 349 SDKEPDPAELYSDIL 363 + PD LY D+ Sbjct: 302 ESELPDEDSLYKDVF 316 >gi|24379826|ref|NP_721781.1| putative pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Streptococcus mutans UA159] gi|290580204|ref|YP_003484596.1| putative pyruvate dehydrogenase E1 component subunit alpha [Streptococcus mutans NN2025] gi|24377796|gb|AAN59087.1|AE014975_5 putative pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Streptococcus mutans UA159] gi|254997103|dbj|BAH87704.1| putative pyruvate dehydrogenase E1 component alpha subunit [Streptococcus mutans NN2025] Length = 357 Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 119/321 (37%), Positives = 187/321 (58%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E E +KEQ Y+ M IR FEE A + + G + GF HL G+EAV G+ +LT+ Sbjct: 35 EAQEVSKEQAKDMYKTMWDIRNFEENARRFFAAGQIPGFVHLYAGEEAVAAGVCANLTDK 94 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HGH +A G D +MAE+ G++ G+ KGKGGSMH+ G G +G+VG Sbjct: 95 DYITSTHRGHGHCVAKGGDLKGMMAEIFGKETGLGKGKGGSMHIADLDKGILGANGMVGG 154 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 L TG A NKY ++D + V FGDGAAN+G +E N+A++W L VI+V ENN +A Sbjct: 155 GFGLATGAAMRNKYLKTDDVAVCFFGDGAANEGLFHECLNMASIWKLPVIFVNENNLFAE 214 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T +SA ++R +++++PG++V+G D+ AV +AV R+ +GP +IE +TY Sbjct: 215 STPQWYSSASATIAERALAYDMPGVRVNGKDLFAVYQVAKEAVERARSGQGPTLIEAVTY 274 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D Y+ + + ++ DP+E R + ++ +E +L EI +K +++ Sbjct: 275 RDHGHFEGDEQKYKAPDGEEKDWADVDPLEVFRNYTIEHELLTEEELDEILEESKKDVDD 334 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 ++++AQ P L D+ Sbjct: 335 AIKYAQDSPIPKAESLLEDVF 355 >gi|84686488|ref|ZP_01014381.1| tpp-dependent acetoin dehydrogenase e1 alpha-subunit [Maritimibacter alkaliphilus HTCC2654] gi|84665401|gb|EAQ11878.1| tpp-dependent acetoin dehydrogenase e1 alpha-subunit [Rhodobacterales bacterium HTCC2654] Length = 335 Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 122/316 (38%), Positives = 180/316 (56%), Gaps = 3/316 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S+ N E L YR M+ IR FE+ A QLY + G H+ G+EAV VG+ +LT+ D+ Sbjct: 14 SKTNTEDYLRMYRQMVRIRTFEDNANQLYLSAKMPGLTHMYSGEEAVAVGICEALTDDDR 73 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G + ++ EL G++ G +GKGGSMH+ +G G + IVG + Sbjct: 74 ITSTHRGHGHCVAKGAEFKEMFCELLGKEEGYCRGKGGSMHIADQSHGNLGANAIVGGSM 133 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + TG A K + SD + V FGDGA QG +YE N+AALW L VIY ENN Y+ T Sbjct: 134 GIATGSALRAKLQGSDDVTVCFFGDGATAQGLMYEVMNMAALWKLPVIYACENNGYSEYT 193 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +A + + R +F I +VDG D+ AV K VA CR +GP +E+ TYRY Sbjct: 194 RTDEIAAGS-ITARAEAFGIEAHKVDGQDVLAVNELTQKLVARCRKGEGPFFVELETYRY 252 Query: 285 RGHSMSD--PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 GH + D YR+++E + R N DPI + R L+ ASE +++ + + K + Sbjct: 253 HGHHVGDINREYYRSKDEEKDWRENRDPIIRFRAYLVDQGIASEEEIEAMNAEIEKDATD 312 Query: 343 SVEFAQSDKEPDPAEL 358 +V +A++ PD +E+ Sbjct: 313 AVAYAEAAPYPDASEV 328 >gi|300176099|emb|CBK23410.2| Pyruvate Dehydrogenase E1 (subunit ?) [Blastocystis hominis] Length = 399 Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 136/328 (41%), Positives = 186/328 (56%), Gaps = 18/328 (5%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L R M+ +RR E ++ LY M + GF HL G+EA G+ ++ D IT+YR H Sbjct: 50 LRIARNMVTMRRMEIESDPLYVMRKIRGFLHLYDGEEACGTGINEAIKPHDDWITSYRCH 109 Query: 113 G-HILACGVDASKIMA---ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 G L G + + A EL G G + GKGGSMHM+ F+GG GIVGAQ +GT Sbjct: 110 GVEFLRMGAGEAGVKAVINELLGHASGSAHGKGGSMHMYEPDKNFFGGSGIVGAQTPVGT 169 Query: 169 GIAFANKY----RRSDK--------ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 G+AFA +Y DK ICV FGDGA+NQGQV+ES N+A LW+L I+VIE Sbjct: 170 GLAFAEQYLHMLNNRDKSVPEGETNICVTMFGDGASNQGQVWESANMAKLWHLPQIFVIE 229 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQY MGTS R+S+ T + G +I G+Q DG ++ AV+ +A C A GPI Sbjct: 230 NNQYGMGTSTERSSSSTEYYMMG-KHHIAGIQADGNNVFAVREACRRAREICVAGNGPIF 288 Query: 277 IEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +E+ TYRY GHSMSDP YRTR+EI +R D + + L+ N E KE + + Sbjct: 289 LELKTYRYHGHSMSDPGVTYRTRDEIQNVRQTRDSVNYIGHILMENGIMDEKQWKEFQNS 348 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++K + V + P+ + L++D+ Sbjct: 349 IKKEVKGWVNDCLKETPPEDSALFTDVF 376 >gi|262282299|ref|ZP_06060067.1| acetoin dehydrogenase [Streptococcus sp. 2_1_36FAA] gi|262261590|gb|EEY80288.1| acetoin dehydrogenase [Streptococcus sp. 2_1_36FAA] Length = 322 Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 120/320 (37%), Positives = 181/320 (56%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MATLDKSLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNADD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++W L VI+ NN Y + Sbjct: 121 MGIAVGAALSQQIQHTGKIVVCFFGDGATNEGVFHEAVNMASIWKLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHHRSAAYGIPGMFIEDGNNVIDVYEGFQKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDI 362 SV+ A+ P + DI Sbjct: 300 SVKSAEESPFPPLESAFEDI 319 >gi|312142561|ref|YP_003994007.1| Pyruvate dehydrogenase (acetyl-transferring) [Halanaerobium sp. 'sapolanicus'] gi|311903212|gb|ADQ13653.1| Pyruvate dehydrogenase (acetyl-transferring) [Halanaerobium sp. 'sapolanicus'] Length = 320 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 118/318 (37%), Positives = 183/318 (57%), Gaps = 1/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +KE L Y M IR FE+ A +L+ G+V G H+ G+EAV VG +L + D + Sbjct: 2 EKSKETLLDMYEKMYKIRLFEDNAVKLFNQGLVRGPMHVYTGEEAVAVGACSNLNDDDLI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G K+ AEL + G KGKGGSMH+ G G +GIVGA + Sbjct: 62 TSTHRGHGHCIAKGGRVDKMAAELLAKGTGYCKGKGGSMHIADPDIGILGANGIVGAGLP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + TG A ++K R +D++ + FGDGA N+G +E+ N+AA+W+L V++V ENN Y + Sbjct: 122 IATGSALSSKMRGTDQVTICFFGDGATNEGAFHEALNMAAIWDLPVVFVCENNLYGLTGP 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + + R S++IPG+ VDG D+ V T+ +A+ + GP +IE TYR + Sbjct: 182 ADEMVSVKDVASRAASYDIPGVVVDGNDVLDVYETVGEAIKRAKNGGGPSLIEAKTYRIK 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + DP YR EE+ + + PI++ R L+ + +L EIE V+K I +V+ Sbjct: 242 GHFVGDPQVYRDDEEVEKWKKRC-PIKKHRNYLIETVGVASEELAEIEAKVKKEIKEAVK 300 Query: 346 FAQSDKEPDPAELYSDIL 363 FA+ +P+ ++ D+ Sbjct: 301 FAKESPDPEIEVVFEDVF 318 >gi|258515291|ref|YP_003191513.1| Pyruvate dehydrogenase (acetyl-transferring) [Desulfotomaculum acetoxidans DSM 771] gi|257778996|gb|ACV62890.1| Pyruvate dehydrogenase (acetyl-transferring) [Desulfotomaculum acetoxidans DSM 771] Length = 318 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 116/319 (36%), Positives = 186/319 (58%), Gaps = 2/319 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMG-MVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +L +Y MLLIRRFEEK +L M + G LC GQEAV G+ +L + D + Sbjct: 1 MTNQSKLESYETMLLIRRFEEKLTELCKMERKIPGMMILCTGQEAVAAGVCGALEKDDVI 60 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 I+ +R HGH++A G D ++MAE+ G++ G +KGK G++HM + +VG + Sbjct: 61 ISNHRSHGHLIAKGADTKELMAEIYGKRTGCNKGKSGTLHMAVPEVNALCTTTVVGGGIP 120 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G AFA +Y++ D+I V FG+G ++G +E+ N+AALWNL VI+V ENN YA Sbjct: 121 IAVGTAFAQQYKKQDQITVCFFGNGTTDEGSFHEALNMAALWNLPVIFVCENNVYAGAQR 180 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + + R +++++PG VDG D AV ++ A A C +GPI++E TYR+R Sbjct: 181 TEHITKIKDIAVRAMAYDMPGEIVDGNDAVAVYEAINSARARCLLGEGPILLECKTYRWR 240 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH +D Y+ ++EI+ + PI++++ L+ SE D+ IE V + + ++V+ Sbjct: 241 GHGEADHQVYQPKDEIDAWMARC-PIKKLQGELMQEGLLSEQDIVRIEARVAETVESAVD 299 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ PD E D+ + Sbjct: 300 FAEKSPWPDLQEALEDVYV 318 >gi|148726206|emb|CAN88919.1| PDHA1/LOC79064 protein [Homo sapiens] Length = 302 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 109/200 (54%), Positives = 147/200 (73%), Gaps = 3/200 (1%) Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + AQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+ Sbjct: 79 LDAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNR 138 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 Y MGTSV RA+A T++ KRG F IPG++VDGMDI V+ A AYCR+ KGPI++E+ Sbjct: 139 YGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMEL 196 Query: 280 LTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK Sbjct: 197 QTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRK 256 Query: 339 IINNSVEFAQSDKEPDPAEL 358 I ++ +FA +D EP EL Sbjct: 257 EIEDAAQFATADPEPPLEEL 276 >gi|153954889|ref|YP_001395654.1| PdhA [Clostridium kluyveri DSM 555] gi|146347747|gb|EDK34283.1| PdhA [Clostridium kluyveri DSM 555] Length = 333 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 121/310 (39%), Positives = 172/310 (55%), Gaps = 1/310 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + Y ML IR FE A + G + GF HL IG+EA+ + +LT+ D + + +R H Sbjct: 16 IDIYDKMLKIRAFENMAKDNFAEGKIPGFVHLYIGEEAIASAVCENLTDADYITSTHRGH 75 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GHI+A G + + AEL GR G KGKGGSMH+ G G +GIVGA + G Sbjct: 76 GHIIAKGGELKYMAAELFGRATGYCKGKGGSMHIADATKGILGANGIVGAGQDIAVGAGM 135 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 + +YR +D++CV FGD + NQG +ES N+++ W L V+YV ENN Y + S R Sbjct: 136 SIQYRGTDQVCVCFFGDASTNQGTFHESLNLSSAWKLPVVYVCENNGYGISVSQKRHQNI 195 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + + R ++ IPG+ VDG D V AV RA KGP +IE TYR RGH D Sbjct: 196 NDIADRAKAYGIPGVVVDGNDPVEVYEASKTAVERARAGKGPTLIECKTYRQRGHFEGDS 255 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 A Y+ +EE E DPI + + LL NK + LK ++ +V I +V+FA + E Sbjct: 256 APYKLKEE-QEGWIKKDPIPRFERYLLENKILGDDKLKAMKESVDNQIKEAVDFALNSPE 314 Query: 353 PDPAELYSDI 362 P+ + ++ D+ Sbjct: 315 PELSSVFEDV 324 >gi|33603678|ref|NP_891238.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Bordetella bronchiseptica RB50] gi|33577803|emb|CAE35068.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Bordetella bronchiseptica RB50] Length = 323 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 120/306 (39%), Positives = 179/306 (58%), Gaps = 3/306 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 NKEQ L AY+ ML IR E + G+L+ G V GF HL +GQEAV M M L D + + Sbjct: 5 NKEQLLDAYQRMLGIRLVELRLGRLFADGEVPGFIHLSVGQEAVAAAMGMVLRPDDTVAS 64 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH LA G+D EL R+ GI KG+GGSMH+ + G G + IVGA + + Sbjct: 65 THRGHGHALAKGIDMDDFFLELMAREEGICKGRGGSMHVANMSIGMLGANAIVGASIPIA 124 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A A++ R++D + V FGDGA +G ++ES N+AALW L ++++ ENN +A S + Sbjct: 125 LGSALAHQVRKTDALAVAFFGDGAMAEGVLHESLNLAALWQLPLLFLCENNGWAE-FSPT 183 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 K +F+IP +VDG D+ AV AVA RA KGP ++E +T+R+RGH Sbjct: 184 HKQFVAPLDKLSAAFSIPHAKVDGNDVLAVMDAAQAAVADIRAGKGPRVLECITHRWRGH 243 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 DP YR +EI+ + HDP+ + + +L +K ++ +++ V+ ++ +VE A Sbjct: 244 YEGDPQKYRDSDEISGL-DEHDPVARF-EAVLDSKGVNQAQRQKVRDAVQAQVDQAVERA 301 Query: 348 QSDKEP 353 + + P Sbjct: 302 RKGRPP 307 >gi|188591997|ref|YP_001796595.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Cupriavidus taiwanensis LMG 19424] gi|170938371|emb|CAP63358.1| Acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Cupriavidus taiwanensis LMG 19424] Length = 343 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 118/318 (37%), Positives = 178/318 (55%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE L+ YR M IR FEE+ + G + GF HL G+EA VG+ L +GD++ Sbjct: 24 LDKETLLTVYRKMRTIRDFEERLHVDFARGDIPGFVHLYAGEEAAGVGILHHLHDGDRIA 83 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A GVD +M E+ G++GG GKGGSMH+ G G +GI+GA L Sbjct: 84 STHRGHGHCIAKGVDPVAMMKEIYGKKGGSCNGKGGSMHIADLSKGMMGANGILGAGAPL 143 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A A K+R ++ + GDGA+NQG ES N+AA+WNL VI+VIENN YA TS Sbjct: 144 ICGAALAAKFRGKGEVGITFCGDGASNQGTFLESLNLAAVWNLPVIFVIENNGYAESTSR 203 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +A ++ R F IPG+ VDG D AV + + R GP ++E R+ G Sbjct: 204 DYGTAVDSYVDRAAGFGIPGVTVDGTDFFAVHEAAGEVIRRAREGGGPSLLECKMVRFYG 263 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D YR E++++R+N D ++ + + + +L I+ V +I ++V+ Sbjct: 264 HFEGDAQTYRAAGELDDIRANKDCLKLFGRTVTQAGVVAREELDAIDREVAALIEHAVQE 323 Query: 347 AQSDKEPDPAELYSDILI 364 A++ +P P +L +D+ + Sbjct: 324 AKAAPQPGPEDLLTDVYV 341 >gi|187926812|ref|YP_001893157.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Ralstonia pickettii 12J] gi|241665142|ref|YP_002983501.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Ralstonia pickettii 12D] gi|187728566|gb|ACD29730.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Ralstonia pickettii 12J] gi|240867169|gb|ACS64829.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Ralstonia pickettii 12D] Length = 341 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 119/306 (38%), Positives = 173/306 (56%), Gaps = 1/306 (0%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ IRRFEE +LYG G + GF HL IG+EAV VG +L+ D ++ YREHGH L Sbjct: 28 RDMVRIRRFEEACAELYGAGKIRGFLHLYIGEEAVGVGTLHALSASDNVVATYREHGHAL 87 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G+D +MAE+ G++ G ++G+GGSMH+F + YGG+ IVG + L G+A A K Sbjct: 88 VRGMDMGVLMAEMYGKREGCARGRGGSMHLFDHAHRLYGGNAIVGGGLPLAVGLALAEKM 147 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 + S ++ FGDGA +G +ES N+AALW L +++ ENN YAMGT++ R AQT+ Sbjct: 148 QPSGRVTACFFGDGAVAEGAFHESMNLAALWKLPLLFCCENNLYAMGTALERHQAQTDLC 207 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 + ++ + +GMDI AV AVA R+ GP +E+ TYR+R HSM DP YR Sbjct: 208 AKAAAYAMAAQSANGMDIVAVHDAAKDAVARIRSGAGPAFLELRTYRFRAHSMYDPDLYR 267 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 E+ ++ PI RL +E ++ + + FA++ Sbjct: 268 QAAEVEAWKAI-GPIHTFTARLKAEGKLTEEAFLALDAEANAEVARAKAFAEAGTWEPVD 326 Query: 357 ELYSDI 362 +L SD+ Sbjct: 327 DLLSDV 332 >gi|70989537|ref|XP_749618.1| pyruvate dehydrogenase E1 component alpha subunit [Aspergillus fumigatus Af293] gi|66847249|gb|EAL87580.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Aspergillus fumigatus Af293] gi|159129024|gb|EDP54138.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Aspergillus fumigatus A1163] Length = 360 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 131/320 (40%), Positives = 177/320 (55%), Gaps = 49/320 (15%) Query: 51 QELSAYRLMLLI---RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 Q+ ++ R++L I +R E A LY + GFCHL GQEAV VG++ +++ D++IT Sbjct: 66 QKTASRRIILTIPHTQRLEIAADALYKQKKIRGFCHLSTGQEAVAVGIEYGISKEDKLIT 125 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG G I+ EL GRQ GIS GKGGSMHMF GF+GG+GIVGA V +G Sbjct: 126 AYRSHGFTFMRGGSIMSIVGELLGRQDGISHGKGGSMHMFCA--GFFGGNGIVGAHVPVG 183 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIAFA +Y D I V +GDGAANQGQV+E+FN+A LWNL V++ E Sbjct: 184 AGIAFAQQYNDRDNITVDAYGDGAANQGQVHEAFNMAKLWNLPVLFGCE----------- 232 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + A + + RA GP++ E +TYRY GH Sbjct: 233 -----------------------------IMAAVKHGREFIRAGNGPLVYEYVTYRYAGH 263 Query: 288 SMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP YRTR E+ R++ DP+ R +L+ +E + K I+ NVRK +N+ V Sbjct: 264 SMSDPGVGYRTRGELKAERAS-DPVSNFRAQLIDWGIITEDEAKTIDKNVRKKVNHEVAE 322 Query: 347 AQSDKEPDPA--ELYSDILI 364 A+ EP+P L+ DI + Sbjct: 323 AEKMPEPEPRLDVLFQDIYV 342 >gi|52079281|ref|YP_078072.1| acetoin dehydrogenase E1 component (TPP-dependent subunit alpha) [Bacillus licheniformis ATCC 14580] gi|52784647|ref|YP_090476.1| hypothetical protein BLi00849 [Bacillus licheniformis ATCC 14580] gi|319646936|ref|ZP_08001164.1| AcoA protein [Bacillus sp. BT1B_CT2] gi|52002492|gb|AAU22434.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus licheniformis ATCC 14580] gi|52347149|gb|AAU39783.1| AcoA [Bacillus licheniformis ATCC 14580] gi|317390995|gb|EFV71794.1| AcoA protein [Bacillus sp. BT1B_CT2] Length = 324 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 120/318 (37%), Positives = 175/318 (55%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KE+ + Y+ ML IR FE++ QL+ G++ GF HL G+EAV G+ L + D + Sbjct: 5 LTKEKAVWMYQKMLEIRYFEDQVHQLFAKGILPGFVHLYAGEEAVAAGVCAHLNDEDTIT 64 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 65 STHRGHGHCIAKGCDLKGMMAEIYGKSAGLCKGKGGSMHIADFDKGMLGANGIVGGGFPL 124 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+++ + V FGDGA NQG +E N+AA+W L VI+V ENN Y T Sbjct: 125 ACGAALTAKYKKTKNVSVCFFGDGANNQGTFHEGINLAAIWKLPVIFVAENNGYGEATPF 184 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S AS+ + + R ++ IPG++VDG D AV +A+ + +GP +IE +TYR G Sbjct: 185 SYASSCESIADRAAAYGIPGVRVDGKDAAAVFQAAGRAIERAKNGEGPTLIECMTYRNYG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D Y+T EE + D I + LL SE + IE V + + +V F Sbjct: 245 HFEGDAQRYKTNEEKAVHQEEKDAIAVFKSELLAKGLMSEEEQSRIEKEVEEAVEEAVAF 304 Query: 347 AQSDKEPDPAELYSDILI 364 ++ P+ EL +D+ + Sbjct: 305 SEKSAYPEETELLTDVYV 322 >gi|219855343|ref|YP_002472465.1| hypothetical protein CKR_2000 [Clostridium kluyveri NBRC 12016] gi|219569067|dbj|BAH07051.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 336 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 121/310 (39%), Positives = 172/310 (55%), Gaps = 1/310 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + Y ML IR FE A + G + GF HL IG+EA+ + +LT+ D + + +R H Sbjct: 19 IDIYDKMLKIRAFENMAKDNFAEGKIPGFVHLYIGEEAIASAVCENLTDADYITSTHRGH 78 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GHI+A G + + AEL GR G KGKGGSMH+ G G +GIVGA + G Sbjct: 79 GHIIAKGGELKYMAAELFGRATGYCKGKGGSMHIADATKGILGANGIVGAGQDIAVGAGM 138 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 + +YR +D++CV FGD + NQG +ES N+++ W L V+YV ENN Y + S R Sbjct: 139 SIQYRGTDQVCVCFFGDASTNQGTFHESLNLSSAWKLPVVYVCENNGYGISVSQKRHQNI 198 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + + R ++ IPG+ VDG D V AV RA KGP +IE TYR RGH D Sbjct: 199 NDIADRAKAYGIPGVVVDGNDPVEVYEASKTAVERARAGKGPTLIECKTYRQRGHFEGDS 258 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 A Y+ +EE E DPI + + LL NK + LK ++ +V I +V+FA + E Sbjct: 259 APYKLKEE-QEGWIKKDPIPRFERYLLENKILGDDKLKAMKESVDNQIKEAVDFALNSPE 317 Query: 353 PDPAELYSDI 362 P+ + ++ D+ Sbjct: 318 PELSSVFEDV 327 >gi|312144613|ref|YP_003996059.1| Pyruvate dehydrogenase (acetyl-transferring) [Halanaerobium sp. 'sapolanicus'] gi|311905264|gb|ADQ15705.1| Pyruvate dehydrogenase (acetyl-transferring) [Halanaerobium sp. 'sapolanicus'] Length = 325 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 119/319 (37%), Positives = 183/319 (57%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E ++E+ L Y+ ML IR FE K G + G HL IG+EA+ VG + E D + Sbjct: 2 ELSEEKMLQMYQDMLEIREFERKVDYFISHGDITGTTHLYIGEEAIAVGAINAAEEKDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GV+ ++MAEL G+ G KGKGGS+H+ + G +GIVG + Sbjct: 62 SSTHRGHGHSIAKGVNIKEMMAELFGKITGSCKGKGGSLHIVDSDTNNLGANGIVGGGIP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A A K ++ D++ + F DGA NQG +E+ N+A++W+L V+++ ENNQY M TS Sbjct: 122 ISVGAALAAKMQKKDEVILCFFSDGAMNQGAFHEAVNMASVWDLPVVFICENNQYGMSTS 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V +A + S R ++NIPG+++DG I V + +AV R GP +I TYR++ Sbjct: 182 VEKAFNIQDLSARAKAYNIPGVKIDGNKIMEVYEVVQEAVERARNDGGPSLIVAETYRWK 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS SD YRT+ E + DPI Q + L + + +I+ V +++ +V+ Sbjct: 242 GHSKSDAKVYRTK-EEEKKWKERDPIAQFEELLKEQGLLDKQKIDDIKKEVDEMVEAAVK 300 Query: 346 FAQSDKEPDPAELYSDILI 364 FAQ PD ++Y D+ + Sbjct: 301 FAQESPFPDKEDIYDDVYV 319 >gi|319400423|gb|EFV88657.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Staphylococcus epidermidis FRI909] Length = 317 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 114/315 (36%), Positives = 180/315 (57%), Gaps = 3/315 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KEQ Y+ M IR FEEK +++ G + GF HL +G+EAV G+ L++ D + + Sbjct: 5 KEQARWIYKTMNEIRFFEEKVHKIFSDGRIPGFVHLYVGEEAVATGVMSQLSDDDYITST 64 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R HGH +A G D + +MAE+ G++ G+ GKGGSMH+ G G +GIV L Sbjct: 65 HRGHGHAIAKGCDLNGMMAEIMGKRDGLGHGKGGSMHVAEIDKGMLGANGIVSGGFGLAI 124 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G + + + D I V FGDGAAN+G +E N A++ +L V+++ ENNQ+A GT+ Sbjct: 125 GASISIINQGKDNIAVCFFGDGAANEGNFHEGLNFASILDLPVLFICENNQFAEGTTHDY 184 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASA ++R ++N+PG++VDGMD+ V +AV + +GP +IE TYR GH Sbjct: 185 ASASETIAERAAAYNMPGVRVDGMDVVEVYKATQEAVERAKKGEGPTLIECDTYRKYGHF 244 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 D ++ ++ N ++ + + RKR + W +E + EIE + + ++V+FA+ Sbjct: 245 EGDEQKVKSPDDRN---ADKNATVEFRKRAIEENWLTEKEADEIEKAAEQAVEDAVKFAE 301 Query: 349 SDKEPDPAELYSDIL 363 + PD LY D+ Sbjct: 302 ESELPDEDSLYKDVF 316 >gi|116747896|ref|YP_844583.1| pyruvate dehydrogenase [Syntrophobacter fumaroxidans MPOB] gi|116696960|gb|ABK16148.1| Pyruvate dehydrogenase (acetyl-transferring) [Syntrophobacter fumaroxidans MPOB] Length = 320 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 123/318 (38%), Positives = 182/318 (57%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGM-GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KE+ L R MLL RRFEEK +L + G V G LC GQEAV G+ +L D ++ Sbjct: 4 TKEKLLEMLRSMLLTRRFEEKLTELCQIEGKVPGMMILCTGQEAVAAGVCAALEPQDVIV 63 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +R HGH+LA G D + +MAE G++ G +KGK G++H+ + +VG + + Sbjct: 64 PNHRSHGHLLARGADPNALMAECFGKRTGFNKGKSGTLHVAVPEVNALCTTTVVGGGIPI 123 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+AFA KYR+ + V FGDGAA++G +E+ N+AALW+L V++V ENN YA Sbjct: 124 AAGVAFAQKYRKQKNVTVCFFGDGAADEGSFHEALNLAALWDLPVLFVCENNLYAGAQRY 183 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + + + R V++ IPG+ VDG D R V A ++A A A +GP +IE TYR RG Sbjct: 184 EEHTKIRDMADRAVAYGIPGIVVDGNDARVVYAAAERARARAVAGEGPSLIECKTYRCRG 243 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H SD Y+ EEI + P+ ++R +L + E LK +E + +I+ ++V F Sbjct: 244 HGESDHQLYQPPEEIASWKERC-PLPRLRDEVLAQELLDEKALKSMEDEISRIVEDAVRF 302 Query: 347 AQSDKEPDPAELYSDILI 364 A+ PDP + SD+ + Sbjct: 303 AEESPWPDPEDALSDVYV 320 >gi|308799657|ref|XP_003074609.1| E1 alpha subunit of pyruvate dehydrogenase (ISS) [Ostreococcus tauri] gi|116000780|emb|CAL50460.1| E1 alpha subunit of pyruvate dehydrogenase (ISS) [Ostreococcus tauri] Length = 262 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 113/242 (46%), Positives = 160/242 (66%), Gaps = 2/242 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 ++ E ++ + + + ++RR E A LY M+ GFCHL GQEAV+VGM+ +LT+ Sbjct: 21 QMVETSRGEIIDMFTQAYMMRRLEIAADVLYKGKMIRGFCHLYDGQEAVVVGMERALTKE 80 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D ++T+YR+H L G ++MAEL GR G +KG GGSMHM+ F+GG+GIVGA Sbjct: 81 DAVVTSYRDHCVHLGRGGTPLEVMAELMGRVDGAAKGIGGSMHMYKRDANFFGGNGIVGA 140 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q +G G+ FA KY + + V +GDGAANQGQ++E+ NIAALW+L VI++ ENN Y M Sbjct: 141 QTPIGAGLGFAFKYNKQPNVAVTMYGDGAANQGQLFEALNIAALWDLPVIFMCENNHYGM 200 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GT+ R++ + KRG +PG++VDGMD AVK + A +C + KGPI++EM TY Sbjct: 201 GTAQERSAKSPVYYKRGDY--VPGLRVDGMDALAVKQAIKFAKEHCVSGKGPIVMEMDTY 258 Query: 283 RY 284 RY Sbjct: 259 RY 260 >gi|242243482|ref|ZP_04797927.1| possible pyruvate dehydrogenase [Staphylococcus epidermidis W23144] gi|242233102|gb|EES35414.1| possible pyruvate dehydrogenase [Staphylococcus epidermidis W23144] Length = 317 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 113/315 (35%), Positives = 180/315 (57%), Gaps = 3/315 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KEQ Y+ M IR FEEK +++ G + GF HL +G+EAV G+ L++ D + + Sbjct: 5 KEQARWIYKTMNEIRFFEEKVHKIFSDGRIPGFVHLYVGEEAVATGVMSQLSDDDYITST 64 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R HGH +A G D + +MAE+ G++ G+ GKGGSMH+ G G +GIV L Sbjct: 65 HRGHGHAIAKGCDLNGMMAEIMGKRDGLGHGKGGSMHVAEIDKGMLGANGIVSGGFGLAI 124 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G + + + D + V FGDGAAN+G +E N A++ +L V+++ ENNQ+A GT+ Sbjct: 125 GASISIINQGKDNVAVCFFGDGAANEGNFHEGLNFASILDLPVLFICENNQFAEGTTHDY 184 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASA ++R ++N+PG++VDGMD+ V +AV + +GP +IE TYR GH Sbjct: 185 ASASETIAERAAAYNMPGVRVDGMDVVEVYKATQEAVERAKKGEGPTLIECDTYRKYGHF 244 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 D ++ ++ N ++ + + RKR + W +E + EIE + + ++V+FA+ Sbjct: 245 EGDEQKVKSPDDRN---ADKNATVEFRKRAIEENWLTEKEADEIEKAAEQAVEDAVKFAE 301 Query: 349 SDKEPDPAELYSDIL 363 + PD LY D+ Sbjct: 302 ESELPDEDSLYKDVF 316 >gi|269929033|ref|YP_003321354.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphaerobacter thermophilus DSM 20745] gi|269788390|gb|ACZ40532.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphaerobacter thermophilus DSM 20745] Length = 345 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 126/333 (37%), Positives = 180/333 (54%), Gaps = 14/333 (4%) Query: 35 DIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF----------CHL 84 D+ FL + + +E L+ YR M LIR FEE + Y +G F HL Sbjct: 10 DLHFL--LDRAGLTREALLAQYRQMCLIRDFEELIAERYAIGKTPNFNMAAGPIRGEMHL 67 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 +GQEAV VG+ LT+ D +++ +R H H LA G+D ++ AE+ G+ G+ +GKGG M Sbjct: 68 AVGQEAVAVGVCSLLTDADAVVSTHRPHHHALAKGIDPGRLAAEIFGKNTGLCRGKGGHM 127 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 H+F + F GIVGA G AF+ + + + V G+GAAN G E+ A Sbjct: 128 HLFDAEKNF-SCSGIVGASYPQAAGAAFSFRAQGQPNVAVAFSGEGAANHGTFSETLTAA 186 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ALW L ++ VIE+N YA T A A T+ S R ++N+P VDGMD+ V A +A Sbjct: 187 ALWQLPLVIVIEDNLYADSTPKWAALASTHQSHRAQAYNVPAYLVDGMDVIDVYAAAKRA 246 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 + RA GP +IE + YRYRGH D +YRTREE+ E+ DPIE++ KRL+ WA Sbjct: 247 IERARAGHGPTVIEAVCYRYRGHFEGDGEDYRTREEV-ELWRTLDPIERLGKRLIRLGWA 305 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 + L E+ + ++ FA+ P+ E Sbjct: 306 DDATLAELREEAARDAAQAIAFAEESPLPEQRE 338 >gi|290579641|ref|YP_003484033.1| putative acetoin dehydrogenase E1 component subunit alpha [Streptococcus mutans NN2025] gi|254996540|dbj|BAH87141.1| putative acetoin dehydrogenase E1 component alpha subunit [Streptococcus mutans NN2025] Length = 307 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 115/307 (37%), Positives = 180/307 (58%), Gaps = 2/307 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M IR + K +L G V G H +G+EA VG LT+ D + + +R HG +A Sbjct: 1 MQRIRDVDTKLNKLVRRGFVQGMTHFSVGEEAASVGAIQGLTDQDIIFSNHRGHGQTIAK 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+D + AEL G+ G SKG+GGSMH+ + + G YG +GIVG +L G A +Y Sbjct: 61 GIDIPAMFAELAGKATGSSKGRGGSMHLANLEKGNYGTNGIVGGGYALAVGAALTQQYDN 120 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + I V GD A N+G +ES N+AA+WNL VI+ I NN+Y + T ++ ++ ++ R Sbjct: 121 TGNIVVAFSGDSATNEGSFHESVNLAAVWNLPVIFFIINNRYGISTDINYSTKISHLYLR 180 Query: 239 GVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 ++ IPG V DG D+ AV M + + Y R+ GP ++E+ +YR+ GHS +D YRT Sbjct: 181 ADAYGIPGHYVEDGNDVIAVYEKMQEVIDYVRSGNGPALVEVESYRWFGHSTADAGAYRT 240 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 +EE++ ++ DP+++ R L NK A++ +L IE V + I ++V+FAQ EP+ + Sbjct: 241 KEEVDAWKAK-DPLKKYRTYLTENKIATDEELDMIEKEVAQEIEDAVKFAQDSPEPELSV 299 Query: 358 LYSDILI 364 + D+ + Sbjct: 300 AFEDVWV 306 >gi|57865798|ref|YP_189875.1| acetoin dehydrogenase, E1 component, alpha subunit [Staphylococcus epidermidis RP62A] gi|57636456|gb|AAW53244.1| acetoin dehydrogenase, E1 component, alpha subunit [Staphylococcus epidermidis RP62A] gi|329732739|gb|EGG69087.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Staphylococcus epidermidis VCU028] Length = 317 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 113/315 (35%), Positives = 179/315 (56%), Gaps = 3/315 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KEQ Y+ M IR FEEK +++ G + GF HL +G+EAV G+ L + D + + Sbjct: 5 KEQAHWIYKTMNEIRFFEEKVHKIFSDGRIPGFVHLYVGEEAVATGVMSQLNDDDYITST 64 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R HGH +A G D + +MAE+ G++ G+ GKGGSMH+ G G +GIV L Sbjct: 65 HRGHGHAIAKGCDLNGMMAEIMGKRDGLGHGKGGSMHVAEIDKGMLGANGIVSGGFGLAI 124 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G + + + D + V FGDGAAN+G +E N A++ +L V+++ ENNQ+A GT+ Sbjct: 125 GASISIINQGKDNVAVCFFGDGAANEGNFHEGLNFASILDLPVLFICENNQFAEGTTHDY 184 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASA ++R ++N+PG++VDGMD+ V +AV + +GP +IE TYR GH Sbjct: 185 ASASETIAERAAAYNMPGVRVDGMDVMEVYKATQEAVERAKKGEGPTLIECDTYRKYGHF 244 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 D ++ ++ N ++ + + RKR + W +E + EIE + + ++V+FA+ Sbjct: 245 EGDEQKVKSPDDRN---ADKNATVEFRKRAIEENWLTEKEADEIEKAAEQAVEDAVKFAE 301 Query: 349 SDKEPDPAELYSDIL 363 + PD LY D+ Sbjct: 302 ESELPDEDSLYKDVF 316 >gi|217979826|ref|YP_002363973.1| Pyruvate dehydrogenase (acetyl-transferring) [Methylocella silvestris BL2] gi|217505202|gb|ACK52611.1| Pyruvate dehydrogenase (acetyl-transferring) [Methylocella silvestris BL2] Length = 327 Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 120/317 (37%), Positives = 176/317 (55%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +K L AYR+M IR FEE+ + G + GF HL G+EAV G+ M L + D++ + Sbjct: 9 DKAGLLEAYRMMKTIREFEERLHIDFAKGDIPGFVHLYAGEEAVATGIMMHLNDRDRIAS 68 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A GVD +MAE+ G+ G +G+GGSMH+ G G +GI+GA L Sbjct: 69 THRGHGHCIAKGVDVHGMMAEIYGKVTGSCQGRGGSMHIADLSKGMMGANGILGAGAPLI 128 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A K+R + + FGDGAANQG V ES N+AA+WNL VI+V ENN YA TS Sbjct: 129 CGAGLAAKFRGDGGVGISFFGDGAANQGMVLESMNLAAVWNLPVIFVCENNGYAEATSRD 188 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +A ++ RG F IPG+ DG D AV + + + R GP ++E R+ GH Sbjct: 189 YGTAVKSYVDRGAGFGIPGVVADGTDFFAVYEVVGELIKRAREGGGPALLECEVIRFFGH 248 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 D Y+ + E R+N D ++ R ++ S+ +L I+ V ++I +SV A Sbjct: 249 FEGDAQTYKAKGENEYNRANRDCLKIFRAKVTEAGVVSDAELDAIDAEVAELIEDSVASA 308 Query: 348 QSDKEPDPAELYSDILI 364 ++ P P +L S++ + Sbjct: 309 KAAPLPSPKDLMSNVYV 325 >gi|167584029|ref|ZP_02376417.1| acetoin dehydrogenase E1 component alpha-subunit [Burkholderia ubonensis Bu] Length = 308 Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 117/306 (38%), Positives = 172/306 (56%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M IR FEE+ + G + GF HL G+EA VG+ L +GD++ + +R HGH +A Sbjct: 1 MRTIRDFEERLHVDFSRGDIPGFVHLYAGEEATGVGILHHLHDGDRIASTHRGHGHCIAK 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GVD +M E+ G+ GG GKGGSMH+ G G +GI+GA L G A A K+R Sbjct: 61 GVDVIGMMKEIYGKSGGSCNGKGGSMHIADLSKGMMGANGILGAGAPLICGAALAAKFRG 120 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ + GDGA+NQG ES N+AA+WNL VI+VIENN YA TS A+A ++ R Sbjct: 121 KGEVGITFAGDGASNQGTFLESLNLAAVWNLPVIFVIENNGYAEATSRDYATAVDSYVDR 180 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 F IPG+ VDG D AV + + R GP ++E R+ GH D YR Sbjct: 181 AAGFGIPGVTVDGTDFFAVHEAAGEVIRRAREGGGPSLLECKMVRFYGHFEGDAQTYRAP 240 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 E++++R+NHD ++ R+ + +L I+ +V +I +V A+ +P+PA+L Sbjct: 241 GELDDIRANHDCLKIFSARVAEAGVVTRAELDAIDRDVAALIERAVREAKEAPQPEPADL 300 Query: 359 YSDILI 364 +D+ + Sbjct: 301 LTDVYV 306 >gi|197105588|ref|YP_002130965.1| thiamine pyrophosphate-dependent dehydrogenase, E1 component alpha subunit [Phenylobacterium zucineum HLK1] gi|196479008|gb|ACG78536.1| thiamine pyrophosphate-dependent dehydrogenase, E1 component alpha subunit [Phenylobacterium zucineum HLK1] Length = 327 Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 123/310 (39%), Positives = 175/310 (56%), Gaps = 10/310 (3%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYR 110 Q+L + ML IRRFEE L VG HL IGQEA I G ++L + D + +R Sbjct: 7 QQLDLFARMLRIRRFEEA---LIAHRPVG---HLSIGQEAAIAGACLALRDDDYVTGTHR 60 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 HGH + G + + +MAE+ G++ GI +G GGSMH+ T G G IVG + L TG Sbjct: 61 SHGHPIGKGAEIAPLMAEIFGKRTGICRGLGGSMHLTDTSRGLIGESAIVGGGLPLATGA 120 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 + + R++D++ + FGDGAANQG ES N+AA+W L VIY ENN YA+ T V ++ Sbjct: 121 GLSIQVRKTDQVSLCFFGDGAANQGTFGESLNMAAVWKLPVIYFCENNGYAVTTPVEKSH 180 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-- 288 Q + ++R + +PG+ VDG D AV AV R+ GP +IE TYR+ HS Sbjct: 181 GQPDIARRANGYGMPGVIVDGQDAEAVYDVTRAAVTRARSGAGPTLIEAKTYRFDEHSNR 240 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++ P YR+ EEI R+ DPI R L+ + D++ IE V + + +VEFA+ Sbjct: 241 LAIPIRYRSEEEIEHHRTQRDPITLYRAVLVSRGL--QADVEAIEAEVAETMAAAVEFAK 298 Query: 349 SDKEPDPAEL 358 EP+ +L Sbjct: 299 ESPEPELQDL 308 >gi|27467172|ref|NP_763809.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus epidermidis ATCC 12228] gi|251811585|ref|ZP_04826058.1| possible pyruvate dehydrogenase [Staphylococcus epidermidis BCM-HMP0060] gi|282876739|ref|ZP_06285595.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Staphylococcus epidermidis SK135] gi|293367431|ref|ZP_06614089.1| TPP-dependent acetoin dehydrogenase complex [Staphylococcus epidermidis M23864:W2(grey)] gi|27314714|gb|AAO03851.1|AE016744_254 branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus epidermidis ATCC 12228] gi|251804963|gb|EES57620.1| possible pyruvate dehydrogenase [Staphylococcus epidermidis BCM-HMP0060] gi|281294390|gb|EFA86928.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Staphylococcus epidermidis SK135] gi|291318377|gb|EFE58765.1| TPP-dependent acetoin dehydrogenase complex [Staphylococcus epidermidis M23864:W2(grey)] gi|329724087|gb|EGG60609.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Staphylococcus epidermidis VCU144] gi|329735837|gb|EGG72117.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Staphylococcus epidermidis VCU045] Length = 317 Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 113/315 (35%), Positives = 179/315 (56%), Gaps = 3/315 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KEQ Y+ M IR FEEK +++ G + GF HL +G+EAV G+ L + D + + Sbjct: 5 KEQAHWIYKTMNEIRFFEEKVHKIFSDGRIPGFVHLYVGEEAVATGVMSQLNDDDYITST 64 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R HGH +A G D + +MAE+ G++ G+ GKGGSMH+ G G +GIV L Sbjct: 65 HRGHGHAIAKGCDLNGMMAEIMGKRDGLGHGKGGSMHVAEIDKGMLGANGIVSGGFGLAI 124 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G + + + D + V FGDGAAN+G +E N A++ +L V+++ ENNQ+A GT+ Sbjct: 125 GASISIINQGKDNVAVCFFGDGAANEGNFHEGLNFASILDLPVLFICENNQFAEGTTHDY 184 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASA ++R ++N+PG++VDGMD+ V +AV + +GP +IE TYR GH Sbjct: 185 ASASETIAERAAAYNMPGVRVDGMDVVEVYKATQEAVERAKKGEGPTLIECDTYRKYGHF 244 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 D ++ ++ N ++ + + RKR + W +E + EIE + + ++V+FA+ Sbjct: 245 EGDEQKVKSPDDRN---ADKNATVEFRKRAIEENWLTEKEADEIEKAAEQAVEDAVKFAE 301 Query: 349 SDKEPDPAELYSDIL 363 + PD LY D+ Sbjct: 302 ESELPDEDSLYKDVF 316 >gi|307720404|ref|YP_003891544.1| Pyruvate dehydrogenase (acetyl-transferring) [Sulfurimonas autotrophica DSM 16294] gi|306978497|gb|ADN08532.1| Pyruvate dehydrogenase (acetyl-transferring) [Sulfurimonas autotrophica DSM 16294] Length = 318 Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 124/308 (40%), Positives = 175/308 (56%), Gaps = 3/308 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y LM+L R FE A + Y G V GF HL IGQEA V + +GD + + YREH Sbjct: 10 YYLMILGRAFEYGAKENYMKGNVSGFLHLDIGQEAFSVAAIKAFEKGD-IFSGYREHIMA 68 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G++ IMAEL G+ G+S GKGGSMH+F FYGG IVG Q+ G A+A Sbjct: 69 ITRGIEPKAIMAELFGKSTGVSGGKGGSMHLFEPSRFFYGGDAIVGGQLPNAVGCAYARD 128 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + S++ +V FGDGA N G +ES NIAA L +++V ENNQYA+ T ++R + Sbjct: 129 LQGSEEGVMVIFGDGATNGGAFFESLNIAAAHKLPLLFVCENNQYAIATKITRVAPFKEQ 188 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 +K+ + + VDGMD AV + KA GPI IE T RY GHS+SD Y Sbjct: 189 AKKAEPYMLT-YSVDGMDAEAVYECVKKAKKQIEEGHGPIFIEAFTCRYEGHSVSDSNAY 247 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R+ +E+ ++ DPIE + L ++ +L+EIE V+K I +VE+A++ +P+ Sbjct: 248 RSAQEMKHCKAK-DPIEYFKNELKEKWLCTDKELEEIEAKVQKTIQEAVEYAENSPQPEL 306 Query: 356 AELYSDIL 363 LY ++ Sbjct: 307 RVLYENVF 314 >gi|88855750|ref|ZP_01130413.1| acetoin dehydrogenase (TPP-dependent) alpha chain [marine actinobacterium PHSC20C1] gi|88815074|gb|EAR24933.1| acetoin dehydrogenase (TPP-dependent) alpha chain [marine actinobacterium PHSC20C1] Length = 327 Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 121/315 (38%), Positives = 173/315 (54%), Gaps = 1/315 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N E S+ M IRRFEE LYG G++ G HL IGQEAV G ++L D + + Sbjct: 11 NPELAASSLETMWKIRRFEEAVEDLYGRGLMHGTMHLSIGQEAVPTGACLALNRDDYITS 70 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A G D ++MAEL ++ G +G+GGSMH+ T+ G G +GIV V + Sbjct: 71 THRGHGHCIAKGADMERMMAELLAKETGYCRGRGGSMHIADTETGNLGANGIVAGGVPIA 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG A + K R + ++ V GDGA +G +E +AA+W L V+++ ENN Y M S Sbjct: 131 TGAALSAKMRGTKQVAVSFHGDGAMGEGAWHEGVVLAAMWQLPVVFLCENNLYGMSMSSE 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +A S R + IPG+ VDG D++AV +AV R GP IE TYR+RGH Sbjct: 191 KAFNLEKLSDRARGYGIPGVTVDGNDVQAVYDATQEAVDRARNGGGPTFIEAKTYRWRGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 S SD YRTR+EI+E R DPI + L ++ D+ + VR + ++V+ A Sbjct: 251 SKSDKNLYRTRDEIDEWRGK-DPIPLFEAQALAAGGLTQADIDAVRDKVRTELRSAVQRA 309 Query: 348 QSDKEPDPAELYSDI 362 + + +L S + Sbjct: 310 NAAPDATADDLLSAV 324 >gi|117928254|ref|YP_872805.1| pyruvate dehydrogenase (acetyl-transferring) [Acidothermus cellulolyticus 11B] gi|117648717|gb|ABK52819.1| Pyruvate dehydrogenase (acetyl-transferring) [Acidothermus cellulolyticus 11B] Length = 342 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 117/316 (37%), Positives = 180/316 (56%), Gaps = 7/316 (2%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYR 110 +EL + LM+ +R FE +A L+ G+V G HL +GQEAV G ++ D YR Sbjct: 22 RELDLFELMVRLRFFERRAHDLFLQGLVKGTSHLSLGQEAVATGFAAAMEPTDLTFATYR 81 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 H H L+ G + +M EL GR G+ GKGGSMH+ S ++G G + IVGA + + G Sbjct: 82 GHAHTLSRGASMTGVMGELMGRSVGLMAGKGGSMHLTSVEHGMMGSYAIVGAHLPVAVGA 141 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A++ K R ++++ V FGDG N G +E+ ++AA+W + V++V ENN Y TS+S + Sbjct: 142 AWSAKVRGTNQVVVCFFGDGTTNIGAFHEALSLAAVWRVPVVFVCENNLYMEYTSISSVT 201 Query: 231 AQTN-FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + R ++ + + VDG D+ AV +++A CR GP++IE LTYR GHS Sbjct: 202 PVVRPLADRASAYGLSAVVVDGNDVAAVFDVARRSIAECRTGGGPVLIEALTYRQGGHSR 261 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 +DP YR +EE+ E DP+ R+ LL + + + G L EIE ++ +VE A++ Sbjct: 262 ADPGTYRPKEEV-EAWLARDPVTCYREHLLASGYPA-GTLDEIEARATAEVDRAVEEART 319 Query: 350 DKEPD----PAELYSD 361 PD A+L++D Sbjct: 320 AAAPDVSLVEADLWAD 335 >gi|83717680|ref|YP_439125.1| pyruvate dehydrogenase, E1 component subunit alpha [Burkholderia thailandensis E264] gi|167615705|ref|ZP_02384340.1| probable pyruvate dehydrogenase, E1 component, alpha subunit [Burkholderia thailandensis Bt4] gi|257142237|ref|ZP_05590499.1| pyruvate dehydrogenase, E1 component, alpha subunit [Burkholderia thailandensis E264] gi|83651505|gb|ABC35569.1| probable pyruvate dehydrogenase, E1 component, alpha subunit [Burkholderia thailandensis E264] Length = 340 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 117/316 (37%), Positives = 178/316 (56%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + K+ L R ML +RR EE QLYG G + GF HL IG+EA +G +L D ++ Sbjct: 18 YGKDFALVLLRDMLRVRRLEETCAQLYGAGKIRGFLHLYIGEEAAGIGALHALEPDDNVV 77 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YREH H L G+D +MAE+ G++ G ++G+GGSMH+F + +GG+ IVG + L Sbjct: 78 ATYREHAHALVRGMDMGVLMAEMFGKREGCARGRGGSMHLFDRQTRLFGGNAIVGGGLPL 137 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A A K + ++ FGDGA +G +ES N+AALW L V++ ENN YAMGT++ Sbjct: 138 AAGLALAEKMQAGKRVTACFFGDGAVAEGVFHESMNLAALWRLPVLFCCENNLYAMGTAL 197 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+ +QT+ + S+ + DGMD+ AV AV Y R GP+ +E+ TYR+R Sbjct: 198 ERSESQTDLCAKAASYGMRVSSADGMDVVAVHDAAKDAVEYVRGGAGPMFVELRTYRFRA 257 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSM D YR + E++E ++ PI RL +E + ++ + + +V F Sbjct: 258 HSMYDAELYRQKAEVDEWKAR-GPIHTFTARLKAEGKLTEDEFAALDADANAEVARAVAF 316 Query: 347 AQSDKEPDPAELYSDI 362 A++ + +L D+ Sbjct: 317 AEAGEWERVEDLAKDV 332 >gi|167577552|ref|ZP_02370426.1| probable pyruvate dehydrogenase, E1 component, alpha subunit [Burkholderia thailandensis TXDOH] Length = 340 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 117/316 (37%), Positives = 178/316 (56%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + K+ L R ML +RR EE QLYG G + GF HL IG+EA +G +L D ++ Sbjct: 18 YGKDFALVLLRDMLRVRRLEETCAQLYGAGKIRGFLHLYIGEEAAGIGALHALDPDDNVV 77 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YREH H L G+D +MAE+ G++ G ++G+GGSMH+F + +GG+ IVG + L Sbjct: 78 ATYREHAHALVRGMDMGVLMAEMFGKREGCARGRGGSMHLFDRQTRLFGGNAIVGGGLPL 137 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A A K + ++ FGDGA +G +ES N+AALW L V++ ENN YAMGT++ Sbjct: 138 AAGLALAEKMQAGKRVTACFFGDGAVAEGVFHESMNLAALWRLPVLFCCENNLYAMGTAL 197 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+ +QT+ + S+ + DGMD+ AV AV Y R GP+ +E+ TYR+R Sbjct: 198 ERSESQTDLCAKAASYGMRVSSADGMDVVAVHDAAKDAVEYVRGGAGPMFVELRTYRFRA 257 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSM D YR + E++E ++ PI RL +E + ++ + + +V F Sbjct: 258 HSMYDAELYRQKAEVDEWKAR-GPIHTFTARLKAEGKLTEDEFAALDADANAEVARAVAF 316 Query: 347 AQSDKEPDPAELYSDI 362 A++ + +L D+ Sbjct: 317 AEAGEWERVEDLAKDV 332 >gi|219847526|ref|YP_002461959.1| Pyruvate dehydrogenase (acetyl-transferring) [Chloroflexus aggregans DSM 9485] gi|219541785|gb|ACL23523.1| Pyruvate dehydrogenase (acetyl-transferring) [Chloroflexus aggregans DSM 9485] Length = 338 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 122/319 (38%), Positives = 175/319 (54%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E ++E L AY M LIR FE++ + G + GF HL G+EAV VG+ L + D + Sbjct: 2 EISRETLLWAYERMRLIREFEDRLHVDFAAGKIPGFVHLYAGEEAVAVGLCAHLRDDDFI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GVD +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHCIAKGVDLRAMMAEIYGKATGACKGKGGSMHIADVDKGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G K + SD++ V FGDGA+NQG +E N+A +W L V++V ENN YA TS Sbjct: 122 LACGAGLTAKLKGSDQVTVCFFGDGASNQGTTFEGLNLAGIWKLPVVFVCENNGYAETTS 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + + + R F +P + + G+D AV +A+A R GP IE TYRY Sbjct: 182 PRYSVSGQDIAARARGFGMPSIAIGGLDFFAVYEAAGEAIARARRGDGPTFIEAQTYRYY 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YRTR E R+ D + + R+ ++ +E +L I+ R I ++V+ Sbjct: 242 GHFEGDSIRYRTRAEEEHYRA-LDCLYRFRQTVVSQGLLTETELDAIDARARAAIADAVQ 300 Query: 346 FAQSDKEPDPAELYSDILI 364 FA + PDP EL +D+ + Sbjct: 301 FAAASPMPDPVELLTDVYV 319 >gi|312866600|ref|ZP_07726815.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus parasanguinis F0405] gi|311097899|gb|EFQ56128.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus parasanguinis F0405] Length = 288 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 111/284 (39%), Positives = 170/284 (59%), Gaps = 2/284 (0%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 G H +G+EA VG ++L + D + + +R HG +A G+D + +MAE+ G+ G KG Sbjct: 3 GMTHFSVGEEAANVGAMLALNDDDLLTSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKG 62 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMH+ G G +GIVG + + G A + +++ KI V FGDGA N+G +E Sbjct: 63 KGGSMHIADLDAGNLGANGIVGGGMGIAVGAALTQQMKKTGKIVVCFFGDGATNEGVFHE 122 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVK 258 + N+A++WNL VI+ NN Y + + + + + +R ++ IPGM + DG ++ V Sbjct: 123 AVNMASIWNLPVIFYCINNGYGISADIKKMTNIQHIHERSAAYGIPGMFIPDGNNVIDVY 182 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 KAV + R+ KGP++IE +TYR+ GHS SDP YRTREE+ E + DPIE +RK L Sbjct: 183 EGFQKAVEHVRSGKGPVLIESVTYRWLGHSSSDPGKYRTREEVEEWKKK-DPIENLRKYL 241 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 L N+ AS +L +I+ V++ + SV+FA+ P + DI Sbjct: 242 LENEIASAEELDQIQEEVKEAVEASVKFAEESPFPPLESAFEDI 285 >gi|70725225|ref|YP_252139.1| hypothetical protein SH0224 [Staphylococcus haemolyticus JCSC1435] gi|68445949|dbj|BAE03533.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 315 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 113/315 (35%), Positives = 177/315 (56%), Gaps = 3/315 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KEQ Y+ M IR FEEK +++ G + GF HL +G+EAV G+ L + D + + Sbjct: 3 KEQARWIYKTMNEIRYFEEKVHKIFSDGKIPGFVHLYVGEEAVATGVMSQLEDDDYITST 62 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R HGH +A G D + +MAE+ G++ G+ GKGGSMH+ G G +GIV L T Sbjct: 63 HRGHGHAIAKGCDLNGMMAEIMGKRDGLGHGKGGSMHVAEIDKGMLGANGIVSGGFGLAT 122 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G + + + + V FGDGAAN+G +E N A++ NL VI+V ENNQ+ GT+ Sbjct: 123 GAGISIRNQGKKNVAVCFFGDGAANEGNFHEGLNFASILNLPVIFVCENNQFGEGTTHDY 182 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASA ++R ++N+PG++VDGMD+ V +AV + +GP +IE TYR GH Sbjct: 183 ASASETIAERASAYNMPGVRVDGMDVVEVYKAAQEAVERAKNGEGPTLIECDTYRKYGHF 242 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 D ++ N+ ++ + E +++ L W +E +L EIE + + ++V++A Sbjct: 243 EGDEQKVKSP---NDRNADKNATEDFKRQALEEGWLTEEELNEIERAAEQAVEDAVKYAD 299 Query: 349 SDKEPDPAELYSDIL 363 + PD L+ D+ Sbjct: 300 ESELPDVDSLHEDVF 314 >gi|260461019|ref|ZP_05809268.1| dehydrogenase E1 component [Mesorhizobium opportunistum WSM2075] gi|259033053|gb|EEW34315.1| dehydrogenase E1 component [Mesorhizobium opportunistum WSM2075] Length = 798 Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 121/342 (35%), Positives = 185/342 (54%), Gaps = 14/342 (4%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 ++SA RA ++P +K+ L + M+L+RRFE A G Sbjct: 2 AISAARARDDFKSAPNLP----------DKQVLLDLFERMVLLRRFESIAQIACRKGETP 51 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GF HL IG+EA VG+ L D + + +R HGH LA G + ++MAEL G+ GI G Sbjct: 52 GFLHLYIGEEATGVGVCAHLRPTDWVTSTHRGHGHALAKGANPGRVMAELFGKADGICGG 111 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 +GG+MH++ G +G +GIV A + GI + + + D I V FGDGAAN G +E Sbjct: 112 RGGTMHLYDRSVGLFGTNGIVAAGIGHAVGIGMSARQQGRDDIGVAFFGDGAANHGGFHE 171 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 + N AA+ +++ ENN YA T + + + + S+ +PG+ VDG D+ AV Sbjct: 172 ALNFAAVQRAPAVFICENNLYATATPLKSITLNPEIATKAASYGMPGVAVDGNDVFAVWL 231 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP--ANYRTREEINEMRSNHDPIEQVRKR 317 M +A R+ KGP +IE TYR GH DP YRT+EE++ DPI+ RK+ Sbjct: 232 AMKEATERARSGKGPTLIEAKTYRTVGHHEGDPVIGTYRTQEELDAW-IKRDPIDMFRKK 290 Query: 318 LLHNKWASEGD-LKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 L+ + ++ + L IE + K+++ ++ FA++ EPDPA + Sbjct: 291 LVEDYGIADAEALAAIEARIEKVVDEALAFARNSPEPDPASM 332 >gi|269929125|ref|YP_003321446.1| dehydrogenase E1 component [Sphaerobacter thermophilus DSM 20745] gi|269788482|gb|ACZ40624.1| dehydrogenase E1 component [Sphaerobacter thermophilus DSM 20745] Length = 333 Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 117/321 (36%), Positives = 179/321 (55%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E K++ L AYR+M IR FEE+ + G + GF HL G+EA+ G+ +L D Sbjct: 11 IGELGKQELLHAYRVMRTIREFEERLHIEFATGEIPGFVHLYAGEEAIAAGICANLRPDD 70 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A G D +M E+ G++ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 WVGSTHRGHGHAIAKGCDVKAMMKEIYGKRDGLCKGKGGSMHIADFDQGMLGANGIVGGA 130 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 L G+ + R +D++ V GDG +NQG ES N+AA+WNL V++V+ENN YA Sbjct: 131 PPLICGVGLMARIRGTDQVGVAFVGDGGSNQGTFLESLNLAAVWNLPVLFVVENNGYAES 190 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TS + +KR F +PG+ VDG D AV +AV R+ GP ++E R Sbjct: 191 TSSRYHQKGIDVAKRADGFGLPGVIVDGHDFFAVYEAAREAVRRARSGGGPTLLECKVNR 250 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 Y GH D YR E+ +R D + + +R+ + +L EI+ +VR +I+++ Sbjct: 251 YYGHFEGDQQTYRAPNEVENIRQTRDCLMRFAQRVTSAGVIDQAELDEIDRDVRALIDDA 310 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V A++ +PD +EL +D+ + Sbjct: 311 VREAKAAPDPDVSELVTDVYV 331 >gi|182677122|ref|YP_001831268.1| pyruvate dehydrogenase (acetyl-transferring) [Beijerinckia indica subsp. indica ATCC 9039] gi|182633005|gb|ACB93779.1| Pyruvate dehydrogenase (acetyl-transferring) [Beijerinckia indica subsp. indica ATCC 9039] Length = 321 Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 119/319 (37%), Positives = 171/319 (53%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + ++E L AYR M IR FEE+ + G + GF HL G+EA G+ M LTE D + Sbjct: 2 QLSREDLLKAYRTMRTIRDFEERLHIEFATGEIPGFVHLYSGEEASAAGICMHLTERDHI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GVD +M+E+ GR+ G+ GKGGSMH+ G G +GIVG Sbjct: 62 ASTHRGHGHCIAKGVDVVSMMSEIYGRKDGVCGGKGGSMHIAEIAKGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A K ++ + V +GDGA+NQG ES N+A +WNL VI+V E+N YA TS Sbjct: 122 LICGAALTAKTLKTGGVAVAFYGDGASNQGTTLESLNLAKIWNLPVIFVCEDNGYAEATS 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S + T +KR F IP +VDG D AV A+ RA GP ++ + TYRY Sbjct: 182 SSYSVGGTQ-TKRAEGFGIPAQEVDGHDFFAVYDAARDAIQKARAGGGPSMLHVKTYRYY 240 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR E + +R D + + R ++ DL ++ + +I +V+ Sbjct: 241 GHFEGDATTYREPGEADRVRKERDCLVKFRTKVTEAALLENQDLDGVDAEIAALIERAVQ 300 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ P +L SD+ + Sbjct: 301 HAKAAPLPTEEDLLSDVYV 319 >gi|15614385|ref|NP_242688.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus halodurans C-125] gi|10174440|dbj|BAB05541.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus halodurans C-125] Length = 337 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 115/309 (37%), Positives = 171/309 (55%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M+ IR FE++ ++ G + GF HL G+EA+ VG+ L D + + +R HGH Sbjct: 20 YQKMVEIRMFEDRVHDIFSKGEIPGFVHLYAGEEAIAVGLCAHLDHNDYITSTHRGHGHC 79 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G + +MAE+ G+ G+ KGKGGSMH+ G G +GIVG +L G A K Sbjct: 80 IAKGCELDGMMAEIYGKSTGLCKGKGGSMHIADLDRGMLGANGIVGGGFTLAAGAALTAK 139 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 ++++ + V FGDGA NQG +E N+AA+W+L V++V ENN Y T ASA Sbjct: 140 FKQTGGVAVCFFGDGANNQGTFHEGINLAAIWDLPVVFVAENNGYGEATPFHYASACEQI 199 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + R +NIPG++VDG D+ AV +AV R +GP +IE +TYR GH D Y Sbjct: 200 TDRAKGYNIPGVKVDGKDVVAVYEVAREAVERARRGEGPTLIECITYRNYGHFEGDAQTY 259 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 +T E E D I K L N +E ++ + V + ++ +V+FA + P P Sbjct: 260 KTGREKEEHTEERDAITLFEKYALSNNLLTEEAIQTVRHEVEQSVDRAVDFANASDYPQP 319 Query: 356 AELYSDILI 364 EL +D+ + Sbjct: 320 EELLTDVYV 328 >gi|26987293|ref|NP_742718.1| pyruvate dehydrogenase (acetyl-transferring) [Pseudomonas putida KT2440] gi|24981938|gb|AAN66182.1|AE016245_11 acetoin dehydrogenase, alpha subunit [Pseudomonas putida KT2440] Length = 325 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 118/320 (36%), Positives = 180/320 (56%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ + EQ L AY +M IR FEE+ + G + GF HL G+EA G+ L + D Sbjct: 3 NQLSTEQLLHAYEVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLRDSDC 62 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ + G G +GIVGA Sbjct: 63 IASTHRGHGHCIAKGVDVYGMMAEIYGKKTGVCGGKGGSMHIADLEKGMLGANGIVGAGA 122 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K + D + V FGDGA+N+G V+E+ N+A++ NL I+V ENN YA T Sbjct: 123 PLVAGAALAAKLKGRDDVSVAFFGDGASNEGAVFEAMNMASIMNLPCIFVAENNGYAEAT 182 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + + A + + R F +PG+ +DG D AV A+ R+ +GP +IE+ RY Sbjct: 183 ASNWSVACDHIADRAAGFGMPGVTIDGFDFFAVYEAAGAAIERARSGQGPSLIEVKLSRY 242 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR +E+ +R + D + Q R + + L I+ V +I ++V Sbjct: 243 YGHFEGDAQTYRAPDEVKNLRESRDCLMQFRNKTTRAGLLTAEQLDAIDARVEDLIEDAV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 A+SD +P PA+L +D+ + Sbjct: 303 RRAKSDPKPQPADLLTDVYV 322 >gi|163737601|ref|ZP_02145018.1| Pyruvate dehydrogenase (lipoamide) [Phaeobacter gallaeciensis BS107] gi|161389127|gb|EDQ13479.1| Pyruvate dehydrogenase (lipoamide) [Phaeobacter gallaeciensis BS107] Length = 331 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 124/316 (39%), Positives = 177/316 (56%), Gaps = 3/316 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ N E L YR M+ IR FE+ A QLY + G H+ G+EAV VG+ +L D+ Sbjct: 4 TKTNTEDYLRMYRQMVRIRSFEDNANQLYLSAKMPGLTHMYSGEEAVAVGICEALKVTDK 63 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D ++ EL G++ G +GKGGSMH+ NG G + IVG + Sbjct: 64 ITSTHRGHGHCVAKGADFKEMFCELLGKEEGYCRGKGGSMHIADQSNGNLGANAIVGGSM 123 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + TG AF K D + V FGDGA QG +YE N+AALWNL VIY ENN Y+ T Sbjct: 124 GIATGSAFTAKLLGKDDVTVCFFGDGATAQGLMYEVMNMAALWNLPVIYACENNGYSEYT 183 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +A + + R +F I QVDG D+ AV K VA R +GP +E +TYRY Sbjct: 184 KTEEIAAGS-ITARAEAFGIEAHQVDGQDVLAVNELTQKLVARARKGEGPFFMEFMTYRY 242 Query: 285 RGHSMSDPAN--YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 GH + D YR++EE + + N DPI + R L+ ASE +++ + V+K Sbjct: 243 HGHHVGDINREYYRSKEEEKDWKENRDPIIKFRGWLVEQGIASEDEIEAMNAEVKKDAEE 302 Query: 343 SVEFAQSDKEPDPAEL 358 +V +A++ PD +E+ Sbjct: 303 AVAYAEAAPYPDQSEV 318 >gi|224283304|ref|ZP_03646626.1| pyruvate dehydrogenase (acetyl-transferring) [Bifidobacterium bifidum NCIMB 41171] gi|310287675|ref|YP_003938933.1| pyruvate dehydrogenase E1 component subunit alpha [Bifidobacterium bifidum S17] gi|309251611|gb|ADO53359.1| pyruvate dehydrogenase E1 component subunit alpha [Bifidobacterium bifidum S17] Length = 328 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 118/319 (36%), Positives = 172/319 (53%), Gaps = 1/319 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + +Q + Y M IRRFEE G +VG HL IG+EAV G+ +LT D Sbjct: 3 TPLTTQQAVDLYTTMRKIRRFEETVKAHIGKEIVGP-AHLYIGEEAVATGVCSNLTHHDY 61 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH LA G + +AEL GR G KGKGGSMH+ G G +G+VG Sbjct: 62 VTSTHRGHGHTLAKGARVDRSLAELYGRATGYCKGKGGSMHLADFSVGMLGANGVVGGGF 121 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 ++ TG A A K R + V FGDGA+++G +E+ N+AA W L VIYV ENN +A T Sbjct: 122 NIATGAALAIKQRHGSDVAVCFFGDGASSRGTFHEAVNLAASWKLPVIYVCENNAWASTT 181 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S+R + IPG+ VDG D+ +V+ K + R GP I+E TYR Sbjct: 182 RFDDIKNVDYLSERAQGYGIPGVTVDGNDVESVRDASAKLIDRARRGDGPSILECKTYRR 241 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH ++DP YR++EE+ E + +DPI++ R+++L ++ DL E + + ++ Sbjct: 242 DGHFITDPQKYRSQEEVEEWKLYNDPIDRFRRKILLEGVVTQDDLDAAEEQLDQEFAQAL 301 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFA + P + D+ Sbjct: 302 EFAVNSPFPKAEDALDDVF 320 >gi|167031616|ref|YP_001666847.1| pyruvate dehydrogenase [Pseudomonas putida GB-1] gi|166858104|gb|ABY96511.1| Pyruvate dehydrogenase (acetyl-transferring) [Pseudomonas putida GB-1] Length = 325 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 117/320 (36%), Positives = 180/320 (56%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ + EQ L AY +M IR FEE+ + G + GF HL G+EA G+ L + D Sbjct: 3 NQLSTEQLLHAYEVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLRDSDC 62 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ + G G +GIVGA Sbjct: 63 IASTHRGHGHCIAKGVDVYGMMAEIYGKKTGVCGGKGGSMHIADLEKGMLGANGIVGAGA 122 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K + D + V FGDGA+N+G V+E+ N+A++ NL I+V ENN YA T Sbjct: 123 PLVAGAALAAKLKGRDDVSVAFFGDGASNEGAVFEAMNMASIMNLPCIFVAENNGYAEAT 182 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + + A + + R F +PG+ +DG D AV A+ R+ +GP +IE+ RY Sbjct: 183 ASNWSVACDHIADRAAGFGMPGVTIDGFDFFAVYEAAGAAIERARSGQGPSLIEVKLSRY 242 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR +E+ +R + D + Q R + + L I+ + +I ++V Sbjct: 243 YGHFEGDAQTYRAPDEVKNLRESRDCLMQFRNKTTRAGLLTAEQLDAIDARIEDLIEDAV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 A+SD +P PA+L +D+ + Sbjct: 303 RRAKSDPKPQPADLLTDVYV 322 >gi|313140454|ref|ZP_07802647.1| dehydrogenase E1 [Bifidobacterium bifidum NCIMB 41171] gi|313132964|gb|EFR50581.1| dehydrogenase E1 [Bifidobacterium bifidum NCIMB 41171] Length = 383 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 118/319 (36%), Positives = 172/319 (53%), Gaps = 1/319 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + +Q + Y M IRRFEE G +VG HL IG+EAV G+ +LT D Sbjct: 58 TPLTTQQAVDLYTTMRKIRRFEETVKAHIGKEIVGP-AHLYIGEEAVATGVCSNLTHHDY 116 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH LA G + +AEL GR G KGKGGSMH+ G G +G+VG Sbjct: 117 VTSTHRGHGHTLAKGARVDRSLAELYGRATGYCKGKGGSMHLADFSVGMLGANGVVGGGF 176 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 ++ TG A A K R + V FGDGA+++G +E+ N+AA W L VIYV ENN +A T Sbjct: 177 NIATGAALAIKQRHGSDVAVCFFGDGASSRGTFHEAVNLAASWKLPVIYVCENNAWASTT 236 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S+R + IPG+ VDG D+ +V+ K + R GP I+E TYR Sbjct: 237 RFDDIKNVDYLSERAQGYGIPGVTVDGNDVESVRDASAKLIDRARRGDGPSILECKTYRR 296 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH ++DP YR++EE+ E + +DPI++ R+++L ++ DL E + + ++ Sbjct: 297 DGHFITDPQKYRSQEEVEEWKLYNDPIDRFRRKILLEGVVTQDDLDAAEEQLDQEFAQAL 356 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFA + P + D+ Sbjct: 357 EFAVNSPFPKAEDALDDVF 375 >gi|227820202|ref|YP_002824173.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alphasubunit [Sinorhizobium fredii NGR234] gi|227339201|gb|ACP23420.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alphasubunit [Sinorhizobium fredii NGR234] Length = 325 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 118/321 (36%), Positives = 178/321 (55%), Gaps = 1/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V +F++E+ + YR M IRRFEE+ + G + G HL GQEA VG+ + L + D Sbjct: 3 VLQFSREELVDVYRTMRTIRRFEERVMEEMATGDIPGNTHLYAGQEASAVGVCLQLRDDD 62 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A GVD +MAEL GR G GKGGSMH+ + G G +GIV A Sbjct: 63 YISSTHRGHGHSIAKGVDIDSMMAELFGRASGTCGGKGGSMHIADLRKGMLGANGIVAAG 122 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G A + K + ++ V GDGA N+G + ESFN+A +W L +I+VIE+N + Sbjct: 123 APITCGAALSAKLLGTGQVAVAFAGDGAMNEGVMSESFNLAKIWMLPIIFVIEDNGFGEA 182 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+ + SA + F++R S++IP ++VDG D+ +V A +AV RA GP ++ + R Sbjct: 183 TANAFVSAGS-FTRRAESYDIPTIEVDGTDVFSVYAAAGEAVERARAGGGPTMLHVHVPR 241 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 Y GH DP YRT EE MR D + R+R+ +L ++ V I + Sbjct: 242 YYGHYSGDPDTYRTPEEKAAMRRERDCLSNFRQRVKEVSLVETAELDAVDEQVEAAIGRA 301 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V A++ P + L +D+ + Sbjct: 302 VSAARAAPFPPTSALTTDVYV 322 >gi|323700511|ref|ZP_08112423.1| dehydrogenase E1 component [Desulfovibrio sp. ND132] gi|323460443|gb|EGB16308.1| dehydrogenase E1 component [Desulfovibrio desulfuricans ND132] Length = 319 Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 118/316 (37%), Positives = 180/316 (56%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +K+ + Y M IR FE+K + + G + GF HL IG+EAV G +LT+ D + Sbjct: 3 LSKKTLVHMYETMNKIRLFEQKLQEFFAAGEIPGFVHLYIGEEAVATGACSALTDADMIT 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH+LA G D +MAE+ GR G KGKGGSMH+ G G +GIVG L Sbjct: 63 STHRGHGHLLAKGGDLKLMMAEIFGRSTGYCKGKGGSMHIADLNLGILGANGIVGGGGPL 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A A+KY+++ + V FGDGA+NQG E+ N A+ W L +++V ENN Y + Sbjct: 123 AVGSALASKYKQTKDVTVCFFGDGASNQGTTQEALNAASAWKLPLVFVNENNGYGISCPQ 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ++ A + + R ++++PG+ VDG D+ AV + +AV R +GP +IE TYR+RG Sbjct: 183 CKSMAVVDIADRAAAYDMPGVVVDGNDVLAVYEAVTEAVKRARKGEGPSLIECKTYRWRG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D YR EE+ E + DPI + +L+ K ++ + +I+ ++ K I+ +V F Sbjct: 243 HFEGDACTYRCTEELEEWMAK-DPIPRFEAKLVEGKTLTQNEADKIKESIAKDIDEAVAF 301 Query: 347 AQSDKEPDPAELYSDI 362 A+ P + L D+ Sbjct: 302 AKESPMPKTSALMDDV 317 >gi|206895189|ref|YP_002247672.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Coprothermobacter proteolyticus DSM 5265] gi|206737806|gb|ACI16884.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Coprothermobacter proteolyticus DSM 5265] Length = 329 Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 122/324 (37%), Positives = 184/324 (56%), Gaps = 9/324 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E + YR ++L+R+ EE+ QL G VG +GQEA+ VG ++ D+ Sbjct: 2 LSNEDLMWMYRKLVLLRQAEERLVQLSNQGKVGTLL-AGVGQEAIPVGAVKTMGSDDKWA 60 Query: 107 TAYRE-HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ++R ++ GV+ + AE+ G+ G +KGKGGSMH+ S K+ GIVG + Sbjct: 61 PSHRGVCDMVVKDGVELKYVYAEVYGKATGYNKGKGGSMHLASYKDNVLNLVGIVGGGIP 120 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L TG A A K +++ + FGDGA+NQG +ES N+AA+W L ++YV++NNQYAM T+ Sbjct: 121 LATGSALAQKKQKTGGATLCFFGDGASNQGTFHESLNLAAVWKLPIVYVVQNNQYAMTTA 180 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S A + + S+R + IPGM VDG D+ AV +D+A+ R +GP +IE TYR+ Sbjct: 181 ASYAVSVKDISERAKGYGIPGMTVDGNDVLAVYEAVDEAMKRARQGEGPSLIECKTYRWY 240 Query: 286 GHSMSDPAN------YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 GH A+ YR EE+ E ++ DPI + K+L+ E K + V Sbjct: 241 GHHAGAGADEQMGWIYRPAEEVEEWKAK-DPIPRFEKKLVEQGVLDESKKKVVWDEVNAY 299 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 I +V+FA+S PDPAE+Y+D+ Sbjct: 300 IEEAVQFAESSPWPDPAEVYTDVF 323 >gi|325276653|ref|ZP_08142384.1| pyruvate dehydrogenase (acetyl-transferring) [Pseudomonas sp. TJI-51] gi|324098215|gb|EGB96330.1| pyruvate dehydrogenase (acetyl-transferring) [Pseudomonas sp. TJI-51] Length = 325 Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 117/320 (36%), Positives = 180/320 (56%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ + EQ L AY +M IR FEE+ + G + GF HL G+EA G+ L + D Sbjct: 3 NQLSTEQLLHAYEVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLRDSDC 62 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ + G G +GIVGA Sbjct: 63 IASTHRGHGHCIAKGVDVYGMMAEIYGKKTGVCGGKGGSMHIADLEKGMLGANGIVGAGA 122 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K + D + V FGDGA+N+G V+E+ N+A++ NL ++V ENN YA T Sbjct: 123 PLVAGAALAAKLKGRDDVAVAFFGDGASNEGAVFEAMNMASIMNLPCVFVAENNGYAEAT 182 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + + A + + R F +PG+ +DG D AV A+ R+ +GP ++E+ RY Sbjct: 183 ASNWSVACDHIADRAAGFGMPGVTIDGFDFFAVYEAAGAAIERARSGQGPSLVEVKLSRY 242 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR +E+ +R + D + Q R + + L I+ V +I ++V Sbjct: 243 YGHFEGDAQTYRAADEVKNLRESRDCLMQFRDKTTRAGLLTAQQLDAIDARVEDLIEDAV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 A+SD +P PA+L SD+ + Sbjct: 303 RRAKSDPKPLPADLLSDVYV 322 >gi|326803867|ref|YP_004321685.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Aerococcus urinae ACS-120-V-Col10a] gi|326650212|gb|AEA00395.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Aerococcus urinae ACS-120-V-Col10a] Length = 357 Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 113/330 (34%), Positives = 180/330 (54%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 DI EV + ++ + Y+ M IR FE+ + + G + GF HL G+EA+ Sbjct: 26 TDIKTASDVEVKAMSPDKAKAIYKTMNEIRDFEDTVHRFFAQGEIPGFVHLYAGEEAIAS 85 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G+ LT+ D + + +R HGH +A G D +MAE+ G++ G+ KGKGGSMH+ G Sbjct: 86 GVCAHLTDDDYITSTHRGHGHCVAKGGDLKGMMAEIFGKETGLGKGKGGSMHIADLDKGI 145 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 G +G+VG L G A NKY ++D + V FGDGA+N+G +E N+A++W L VI+ Sbjct: 146 LGANGMVGGGFGLAVGAAMRNKYLKTDSVAVCFFGDGASNEGLFHECLNMASIWQLPVIF 205 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 V ENN +A T +S ++R ++N+PG++VDG D+ AV +A+ R G Sbjct: 206 VNENNFFAESTPQWYSSGSETIAERAAAYNMPGVRVDGKDLMAVYEAAGEAIDRARQGGG 265 Query: 274 PIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 P +IE + YR GH D Y+ + ++ D I+ + + + AS+ +L+EIE Sbjct: 266 PSLIECVAYRNYGHFEGDEQKYKALSGPEKEWADRDAIQVFKDYAIEHGLASQEELEEIE 325 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++ I +VE+A+ P L +D+ Sbjct: 326 AQAKQDIEEAVEYAKESPIPAAENLLTDVF 355 >gi|313496929|gb|ADR58295.1| AcoA [Pseudomonas putida BIRD-1] Length = 325 Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 117/320 (36%), Positives = 180/320 (56%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ + +Q L AY +M IR FEE+ + G + GF HL G+EA G+ L + D Sbjct: 3 NQLSTDQLLHAYEVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLRDSDC 62 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ + G G +GIVGA Sbjct: 63 IASTHRGHGHCIAKGVDVYGMMAEIYGKKTGVCGGKGGSMHIADLEKGMLGANGIVGAGA 122 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K + D + V FGDGA+N+G V+E+ N+A++ NL I+V ENN YA T Sbjct: 123 PLVAGAALAAKLKGRDDVSVAFFGDGASNEGAVFEAMNMASIMNLPCIFVAENNGYAEAT 182 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + + A + + R F +PG+ +DG D AV A+ R+ +GP +IE+ RY Sbjct: 183 ASNWSVACDHIADRAAGFGMPGVTIDGFDFFAVYEAAGAAIERARSGQGPSLIEVKLSRY 242 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR +E+ +R + D + Q R + + L I+ V +I ++V Sbjct: 243 YGHFEGDAQTYRAPDEVKNLRESRDCLMQFRNKTTRAGLLTAEQLDAIDARVEDLIEDAV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 A+SD +P PA+L +D+ + Sbjct: 303 RRAKSDPKPQPADLLTDVYV 322 >gi|297621429|ref|YP_003709566.1| pyruvate dehydrogenase, E1 component alpha subunit [Waddlia chondrophila WSU 86-1044] gi|297376730|gb|ADI38560.1| pyruvate dehydrogenase, E1 component alpha subunit [Waddlia chondrophila WSU 86-1044] Length = 342 Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 119/316 (37%), Positives = 177/316 (56%), Gaps = 5/316 (1%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE L A + M+ IR FE +A Y G +GGF H +GQEA+ + IT+ Sbjct: 27 KEALLEALKKMVRIRNFELRAESAYLQGKIGGFFHSYMGQEAIQTAAVDAFGINHWWITS 86 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR H L G ++M+EL GR G + G+GGSMH+++ + GG GIV QV + T Sbjct: 87 YRCHALALLLGATTDELMSELFGRANGNALGRGGSMHLYTDR--LLGGFGIVTGQVPIAT 144 Query: 169 GIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G AFA KY+ +CF GDGA QG +ES N+A+LW+L ++YVIENN++ MGT+V+ Sbjct: 145 GAAFALKYQEIKDQAAICFLGDGAVAQGSFHESLNLASLWDLPIVYVIENNRWGMGTAVN 204 Query: 228 RASAQTNFSKRGV-SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA + ++ ++N+ V+GMD A ++ P++IE +T R+RG Sbjct: 205 RAISINRLAEDSAPAYNMKAYTVNGMDYMNCHALFEEVKEEVLKTSRPVLIEAVTERFRG 264 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS+SDP YRT+E + E DPI++++ L W E KE++ +R+ + S++ Sbjct: 265 HSISDPGLYRTKEALKEGMKK-DPIQELKNFLEEKGWIDEEAFKEMDKEMRETMVASLKH 323 Query: 347 AQSDKEPDPAELYSDI 362 A PDP L D+ Sbjct: 324 ADESPWPDPVVLEEDV 339 >gi|297203906|ref|ZP_06921303.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sviceus ATCC 29083] gi|197713094|gb|EDY57128.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sviceus ATCC 29083] Length = 325 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 116/311 (37%), Positives = 173/311 (55%), Gaps = 3/311 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ Y M+LIRR E+ A L+ G+V G HL G EA+ VG +L + D + YR H Sbjct: 7 LALYEQMVLIRRTEKAAHDLFLQGLVKGTTHLAAGHEAIAVGASAALRDDDYVFATYRGH 66 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 H +A G + +AEL R G+ KGGSMH+ G + IVGA + + G A+ Sbjct: 67 HHAMARGATPEECLAELMSRATGLCGAKGGSMHLTKAATNMLGSYAIVGAHLPMAVGAAW 126 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA- 231 + K R + ++ V FGDGA N G +E+ N+AA+W L V++V ENN Y T ++ +A Sbjct: 127 SAKLRGTGQLAVAFFGDGATNIGAFHEALNLAAVWKLPVLFVCENNLYMEYTPIADVTAV 186 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + R ++ IPG VDG D+ +V+ T+ + RA GP ++E TYR+ GHS +D Sbjct: 187 PRPAADRAPAYGIPGEVVDGNDVVSVQETVARLARRARAGDGPALLEAETYRHFGHSRTD 246 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 PA YR EE+ E HDP++ R RL+ E + E + R ++ +VE A++ Sbjct: 247 PATYRPAEEV-ERWLKHDPLDIARGRLVEAG-VPEERVAEADERARTVVQEAVEAAKNAP 304 Query: 352 EPDPAELYSDI 362 PDP E ++D+ Sbjct: 305 PPDPREAFTDV 315 >gi|254452156|ref|ZP_05065593.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Octadecabacter antarcticus 238] gi|198266562|gb|EDY90832.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Octadecabacter antarcticus 238] Length = 325 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 123/319 (38%), Positives = 176/319 (55%), Gaps = 3/319 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N E+ L YR M+ IR FE+ A QLY + G H+ GQEAV VG+ +L + D++ + Sbjct: 7 NTEEYLRMYRQMVRIRTFEDNANQLYLSAKMPGLTHMYSGQEAVAVGICEALKKTDKITS 66 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A G + ++ EL G++ G +GKGGSMH+ NG G + IVG + + Sbjct: 67 THRGHGHCVAKGANFKEMFCELLGKEEGYCRGKGGSMHIADQSNGNLGANAIVGGSMGIA 126 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG AF K D + V FGDGA QG +YE N+AALWNL VIY ENN Y+ T + Sbjct: 127 TGSAFTAKMLGKDDVTVCFFGDGATAQGILYEVMNMAALWNLPVIYACENNGYSEYTKTA 186 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +A + + R +F I VDG D+ AV +K VA R +GP IE++TYRY GH Sbjct: 187 EIAAGS-ITARAEAFGIEAFTVDGQDVLAVNELTEKLVARSRKGEGPFFIELMTYRYHGH 245 Query: 288 SMSDPAN--YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + D YR+++E ++ DPI + L AS+ DL I + +VE Sbjct: 246 HVGDINREYYRSKDEEKLWKTERDPITKFATWLTKEGIASDADLAAITAEISADAAAAVE 305 Query: 346 FAQSDKEPDPAELYSDILI 364 +A + K PD +E+ + + Sbjct: 306 YALAAKYPDTSEVDQHVFV 324 >gi|121609189|ref|YP_996996.1| pyruvate dehydrogenase [Verminephrobacter eiseniae EF01-2] gi|121553829|gb|ABM57978.1| Pyruvate dehydrogenase (acetyl-transferring) [Verminephrobacter eiseniae EF01-2] Length = 346 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 129/334 (38%), Positives = 184/334 (55%), Gaps = 7/334 (2%) Query: 28 TSSVDCVDIPFLEGFEVSEFNKEQELSAY-RLMLLIRRFEEKAGQLYGMGMVGGFCHLCI 86 T+ V IP +SE +Q L + R M LIR+FEE A Q Y G V G HL I Sbjct: 2 TADVGSEGIP-----RISERFSQQALHGFLRQMHLIRQFEEGAEQAYMRGQVHGTMHLSI 56 Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 GQEA G+ L D + + +R HGH +A G + + AE G+ G +G+GGSMH+ Sbjct: 57 GQEASATGVCAVLQRADYITSTHRGHGHCIAKGAEPKYMFAEFFGKDSGYCRGRGGSMHI 116 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 G G +GIVG + + G A A + R + FGDGA N+G +ES N+AAL Sbjct: 117 ADMATGNLGANGIVGGGLPIAVGAALALQQERRPNVVACFFGDGANNEGAFHESLNMAAL 176 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 W L V++V ENNQY M TS R++A ++R ++++PG+ VDG D AV +AV Sbjct: 177 WKLPVVFVCENNQYGMSTSTQRSTAVQRIAQRAQAYDMPGVTVDGNDFFAVAEAAAQAVE 236 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASE 326 R+ +GP ++E LTYR+RGHS SD YR++EEI E DPI + + LL + Sbjct: 237 RARSGQGPALLECLTYRHRGHSKSDRNRYRSKEEI-ESWIARDPIGRFQDALLARGSIDQ 295 Query: 327 GDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 + + +V + I +EFA++ P+ + L S Sbjct: 296 AQIAALVSSVEQEIAAGIEFAKNSPAPELSSLTS 329 >gi|311064572|ref|YP_003971297.1| pyruvate dehydrogenase [Bifidobacterium bifidum PRL2010] gi|310866891|gb|ADP36260.1| Pyruvate dehydrogenase (acetyl-transferring) [Bifidobacterium bifidum PRL2010] Length = 328 Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 117/319 (36%), Positives = 172/319 (53%), Gaps = 1/319 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + +Q + Y M IRRFEE G +VG HL IG+EAV G+ +LT D Sbjct: 3 TPLTTQQAVDLYTTMRKIRRFEETVKAHIGKEIVGP-AHLYIGEEAVATGVCSNLTHHDY 61 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH LA G + +AEL GR G KGKGGSMH+ G G +G+VG Sbjct: 62 VTSTHRGHGHTLAKGARVDRSLAELYGRATGYCKGKGGSMHLADFSVGMLGANGVVGGGF 121 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 ++ TG A A K R + V FGDGA+++G +E+ N+AA W L VIYV ENN +A T Sbjct: 122 NIATGAALAIKQRHGSDVAVCFFGDGASSRGTFHEAVNLAASWKLPVIYVCENNAWASTT 181 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S+R + IPG+ VDG D+ +V+ K + R GP I+E TYR Sbjct: 182 RFDDIKNVDYLSERAQGYGIPGVTVDGNDVESVRDASAKLIDRARRGDGPSILECKTYRR 241 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH ++DP YR++EE+ E + +DPI++ R++++ ++ DL E + + ++ Sbjct: 242 DGHFITDPQKYRSQEEVEEWKLYNDPIDRFRRKIMLEGVVAQNDLDAAEERLDQEFAQAL 301 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFA + P + D+ Sbjct: 302 EFAVNSPFPKAEDALDDVF 320 >gi|226946205|ref|YP_002801278.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha AcoA [Azotobacter vinelandii DJ] gi|226721132|gb|ACO80303.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit, AcoA [Azotobacter vinelandii DJ] Length = 325 Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 128/321 (39%), Positives = 183/321 (57%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + EQ L AYR+M IR FEE+ + G + GF HL G+EA G+ L + D Sbjct: 2 TTHLSAEQLLHAYRVMRTIRVFEERLHIEFATGEIPGFVHLYAGEEASAAGVMAHLRDDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A GVD +MAE+ G++ G+ +GKGGSMH+ G G +GIVGA Sbjct: 62 CISSNHRGHGHCIAKGVDVHGMMAEIYGKKTGVCQGKGGSMHIADLSKGMLGANGIVGAG 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 L G A A K + SD + V FGDGA+N+G V+E+ N+AA+ NL I+V ENN YA Sbjct: 122 APLVAGAALAAKLKGSDAVAVAFFGDGASNEGAVFEAMNLAAIMNLPCIFVAENNGYAEA 181 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+ + + A + + R F +PG+ VDG D AV AVA RA +GP +IE+ R Sbjct: 182 TASNWSVACDHIADRAAGFGMPGVTVDGFDFFAVHEAAGAAVARARAGEGPSLIEVKLTR 241 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 Y GH D YR E+ EMR D ++Q R+R + L +I+ V + I +S Sbjct: 242 YYGHFEGDAQTYRDMGELKEMREVRDCLKQFRERTIAAGLLDASQLDDIDGEVERQIEDS 301 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V A+SD +P A+L +D+ + Sbjct: 302 VIKAKSDPKPPAADLLADVYV 322 >gi|148545844|ref|YP_001265946.1| pyruvate dehydrogenase [Pseudomonas putida F1] gi|148509902|gb|ABQ76762.1| Pyruvate dehydrogenase (acetyl-transferring) [Pseudomonas putida F1] Length = 325 Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 117/320 (36%), Positives = 179/320 (55%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ + +Q L AY +M IR FEE+ + G + GF HL G+EA G+ L + D Sbjct: 3 NQLSTDQLLHAYEVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLRDSDC 62 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ + G G +GIVGA Sbjct: 63 IASTHRGHGHCIAKGVDVYGMMAEIYGKKTGVCGGKGGSMHIADLEKGMLGANGIVGAGA 122 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K + D + V FGDGA+N+G V+E+ N+A++ NL I+V ENN YA T Sbjct: 123 PLVAGAALAAKLKGRDDVSVAFFGDGASNEGAVFEAMNMASIMNLPCIFVAENNGYAEAT 182 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + + A + + R F +PG+ +DG D AV A+ R+ +GP +IE+ RY Sbjct: 183 ASNWSVACDHIADRAAGFGMPGVTIDGFDFFAVYEAAGAAIERARSGQGPSLIEVKLSRY 242 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR +E+ +R + D + Q R + L I+ V +I ++V Sbjct: 243 YGHFEGDAQTYRAPDEVKNLRESRDCLMQFRNKTTRAGLLKAEQLDAIDARVEDLIEDAV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 A+SD +P PA+L +D+ + Sbjct: 303 RRAKSDPKPQPADLLTDVYV 322 >gi|85014327|ref|XP_955659.1| pyruvate dehydrogenase E1 component subunit alpha [Encephalitozoon cuniculi GB-M1] gi|19171353|emb|CAD27078.1| PYRUVATE DEHYDROGENASE E1 COMPONENT ALPHA SUBUNIT [Encephalitozoon cuniculi GB-M1] Length = 349 Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 124/328 (37%), Positives = 193/328 (58%), Gaps = 16/328 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V ++ + Y+ M+ +R +E + Y + GFCHL IGQE + ++ ++ +GD Sbjct: 31 VHRIGVDKAVYIYKQMMRMRCMDEAMDREYKRKNIRGFCHLSIGQEGIYAALEYAM-DGD 89 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +++YR HG G +IM E+ GRQ G+ KGKGGSMH+++ F+GGHGIVGAQ Sbjct: 90 VAVSSYRCHGIAYVTGCSILEIMGEVLGRQAGVCKGKGGSMHLYNKS--FFGGHGIVGAQ 147 Query: 164 VSLGTGIAFANKYRR------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + LG G+A+A +Y R K+C +GDGAANQGQV+ESFN+A +W L +++V EN Sbjct: 148 IPLGLGMAYALEYNRRMGWSQGGKVCYAFYGDGAANQGQVWESFNMAMVWRLPIVFVCEN 207 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N Y M T S SA T+F RG + IPG+++ +I + + + A Y GPII+ Sbjct: 208 NGYGMWTPASSVSADTDFYLRGGA--IPGIRIGHGNIFGLMSVLKYARKY-SVENGPIIV 264 Query: 278 EMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 ++ TYR+ HS +D +YR+REE++ + D +E V +RLL + SE +L + ++ Sbjct: 265 QIDTYRFCTHSAADERESYRSREEVDAEK-KRDCMEDVGRRLL--AFYSEEELDALRSSI 321 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDILI 364 + V+ A+ + + EL DIL+ Sbjct: 322 LAEVERDVDAARKSRPTEEDELCRDILL 349 >gi|260576361|ref|ZP_05844352.1| dehydrogenase E1 component [Rhodobacter sp. SW2] gi|259021432|gb|EEW24737.1| dehydrogenase E1 component [Rhodobacter sp. SW2] Length = 341 Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 124/313 (39%), Positives = 178/313 (56%), Gaps = 8/313 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGM-VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 L+ YR M IR FEE+ G+L+ G G HL IG+EAV VG+ ++TEGD T +R Sbjct: 9 LARYRTMRRIRSFEERVGELFLRGASAGSMLHLSIGEEAV-VGVTAAMTEGDSFTTHHRG 67 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS--LGTG 169 HG + G D +++MAE+ G++ G +GKGGSMH+ G G + IVG + +G G Sbjct: 68 HGVFIGRGADPARMMAEIAGKEAGYCRGKGGSMHIADRALGHLGANAIVGGGIPHIVGAG 127 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 + + N RS ++ V FGDGA QG +YES N+AALW+L V++ NNQY MGT V R+ Sbjct: 128 LTYRNL--RSGQVSVAFFGDGAMQQGILYESMNMAALWHLPVLFCCINNQYGMGTRVDRS 185 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + FS+R +F + G +VDG ++ AV VA RA + P IE+ YR+ GH+ Sbjct: 186 AGKLAFSERAEAFGLTGARVDGTNVEAVHQVATALVAGARAGQ-PGYIEIDAYRFYGHAR 244 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + YR EE E R DP+ R RL A E DL I+ ++ ++E+A Sbjct: 245 MDKSPYRDPEEEAEGRLR-DPVVTARARLAVAGLADEADLARIDAEAATEMDAALEYAVE 303 Query: 350 DKEPDPAELYSDI 362 P A ++ D+ Sbjct: 304 AVAPPLASMFEDV 316 >gi|254440064|ref|ZP_05053558.1| Dehydrogenase E1 component superfamily [Octadecabacter antarcticus 307] gi|198255510|gb|EDY79824.1| Dehydrogenase E1 component superfamily [Octadecabacter antarcticus 307] Length = 327 Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 123/319 (38%), Positives = 176/319 (55%), Gaps = 3/319 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N E L YR M+ IR FE+ A QLY + G H+ GQEAV VG+ +L D++ + Sbjct: 9 NTEDYLRMYRQMVRIRTFEDNANQLYLSAKMPGLTHMYSGQEAVAVGICEALKVSDKITS 68 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A G + ++ EL G++ G +GKGGSMH+ NG G + IVG + + Sbjct: 69 THRGHGHCVAKGANFKEMFCELLGKEEGYCRGKGGSMHIADQSNGNLGANAIVGGSMGIA 128 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG AF K D + V FGDGA QG +YE N+AALWNL VIY ENN Y+ T + Sbjct: 129 TGSAFTAKMLGKDDVTVCFFGDGATAQGILYEVMNMAALWNLPVIYACENNGYSEYTKTA 188 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +A + + R +F I QVDG D+ AV +K VA R +GP IE++TYRY GH Sbjct: 189 EIAAGS-ITARAEAFGIEAFQVDGQDVLAVNELTEKLVARSRKGEGPFFIELMTYRYHGH 247 Query: 288 SMSDPAN--YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + D YR+++E ++ DPI + L AS+ DL ++ + +VE Sbjct: 248 HVGDINREYYRSKDEEKLWKTERDPITKFATWLTTEGIASDADLAAMQAEISADAAAAVE 307 Query: 346 FAQSDKEPDPAELYSDILI 364 +A + K PD +E+ + + Sbjct: 308 YALAAKYPDVSEVDQHVFV 326 >gi|218674667|ref|ZP_03524336.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Rhizobium etli GR56] Length = 286 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 110/280 (39%), Positives = 163/280 (58%) Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEA +G+ + LT+ DQ+ + +R HGH +A G D ++ AE G+ G G+GG Sbjct: 2 HLSIGQEASAMGVCLPLTQEDQITSTHRGHGHCIAKGADVKRMFAEFFGKTTGYCAGRGG 61 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMH+ G G +GIVG + + G A +K ++ K+ V FGDGA N+G +E+ N Sbjct: 62 SMHIADVTTGNLGANGIVGGGLPIAVGAALTSKRLKTGKVVVCFFGDGANNEGAFHEALN 121 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +AA+W L VI+V ENN Y M TS +R++A N + R ++++PG+ VDG + V Sbjct: 122 MAAVWKLPVIFVCENNGYGMSTSTARSTAVANIADRASAYSMPGVIVDGNVLSEVAEATH 181 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 AV + +GP +IE TYRYRGHS SD YRT++EI + SN DPI + L Sbjct: 182 NAVERAKRGEGPSLIECKTYRYRGHSKSDRNRYRTKDEIEDWMSNRDPIARFETELREFG 241 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 A++ +L I +V I +EFA+ P+ + L ++ Sbjct: 242 VANDTELAAIRKSVEDEIAAGIEFAKQSPMPEISGLADNV 281 >gi|254480271|ref|ZP_05093519.1| Dehydrogenase E1 component superfamily protein [marine gamma proteobacterium HTCC2148] gi|214039833|gb|EEB80492.1| Dehydrogenase E1 component superfamily protein [marine gamma proteobacterium HTCC2148] Length = 326 Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 114/318 (35%), Positives = 171/318 (53%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE L AYR+M IR FEE+A G + GF HL GQEA VG+ L++ D +I Sbjct: 3 LDKEDLLRAYRMMKTIREFEERAHTEIMNGQIAGFTHLYTGQEANAVGICEHLSDEDAII 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D +M EL G G+ KGKGGSMH+ G G +GIV + Sbjct: 63 STHRGHGHCIAKGADVPGMMKELWGSSEGLCKGKGGSMHVADVDKGILGANGIVAGGPPI 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A A K R++ K+ + GDG+ NQG +E+ N+A + + ++VIENN Y+ T++ Sbjct: 123 SVGAALAAKIRKNGKVAISFSGDGSVNQGTCFEAMNLAVVLEVPAVFVIENNYYSEHTNI 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S A + R +F P + DG D +V KA+ + R+ KGP + T R+ G Sbjct: 183 SYAVGCDDLKARTEAFGFPVFEADGADFFSVYEAAGKAIEHARSGKGPAGVFAETGRFHG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H + DP YR E+ ++R N D ++ R R+ S +L ++ V +I SV Sbjct: 243 HFVGDPQYYRAEGELEDLRENSDCLKNFRARMAETGEISAEELDAVDAEVMAVIEQSVVD 302 Query: 347 AQSDKEPDPAELYSDILI 364 A++ P P ++ +D+ I Sbjct: 303 AKAAARPTPEQVTADVYI 320 >gi|262275659|ref|ZP_06053468.1| acetoin dehydrogenase E1 component alpha-subunit [Grimontia hollisae CIP 101886] gi|262219467|gb|EEY70783.1| acetoin dehydrogenase E1 component alpha-subunit [Grimontia hollisae CIP 101886] Length = 328 Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 118/320 (36%), Positives = 176/320 (55%), Gaps = 3/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +SE + E LS YR ML R FE++A L+ +V G HL +GQEAV +++ +GD Sbjct: 1 MSETSLETRLSLYRTMLRARGFEQRASDLFLQNLVKGTNHLAMGQEAVAAAFGVAMQQGD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 YR H H L G D + ++ EL GR+ GI GKGGSMH+ S ++G G + I+GAQ Sbjct: 61 YTYCTYRGHTHTLVRGADMTALLGELMGRECGILSGKGGSMHLTSVEHGAMGSYAIIGAQ 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A+ ++Y+ + ++ VV FGDG N G +E+ N A +WNL V++V ENN Y Sbjct: 121 LCIANGSAWKSQYKGTGEVTVVFFGDGTTNIGAFHEALNFAVVWNLPVVFVCENNLYMEY 180 Query: 224 TSVSRASA-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T + +A + + R ++ + + VDG D A+ A+ R GP +IE TY Sbjct: 181 TPIGAVTAVEHPAADRASAYGLDAIIVDGNDADAMFDVATAAIEKARNGGGPSLIEAKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R++GHS +DP YR EE+ + +DPI R RL + L IE V IN Sbjct: 241 RHQGHSRADPGKYRPAEEVERWLA-YDPIPLYRSRLAEQG-VEDSVLTNIESEVDAEINQ 298 Query: 343 SVEFAQSDKEPDPAELYSDI 362 + E A++ PD + + D+ Sbjct: 299 ATEAAKASPAPDVSLCFKDV 318 >gi|242399622|ref|YP_002995047.1| Thiamine pyrophosphate-dependent dehydrogenase, E1 component alpha subunit [Thermococcus sibiricus MM 739] gi|242266016|gb|ACS90698.1| Thiamine pyrophosphate-dependent dehydrogenase, E1 component alpha subunit [Thermococcus sibiricus MM 739] Length = 335 Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 119/325 (36%), Positives = 176/325 (54%), Gaps = 12/325 (3%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVI 92 +V E KE L Y++M IR +EE + Y G + G HL GQE+ Sbjct: 3 KVEEIPKETLLEIYKVMHKIRTYEETLAKWYYEGKTPRFDISAGPIPGELHLSSGQESAA 62 Query: 93 VGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG 152 VG+ + L D ++ +R H +A GVD K+ AE+ G+ G+S GKGG MH+F Sbjct: 63 VGVCLHLKPEDAVVGTHRAHHFAIAKGVDLKKMTAEIFGKATGLSGGKGGHMHLFDAYQN 122 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GIVGA G+ A K + D + V GDGAANQG +E+ N+AA+W L VI Sbjct: 123 F-SCSGIVGASFPQAVGVGIAAKLKGEDYVAVAVGGDGAANQGTFHEALNLAAIWKLPVI 181 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +VIE+N +A+ +++A + S+R ++ IPG+ VDG D+ AV +AV R + Sbjct: 182 FVIEDNSWAISVPKDKSTAVSKNSERAAAYGIPGVSVDGTDVIAVYEVAKEAVERARRGE 241 Query: 273 GPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 GP +IE+ YR RGH DP +YR +E+ E+ DP+ K LL A+E +L +I Sbjct: 242 GPSLIEIKVYRLRGHFEGDPQHYRPKEDF-ELAKQKDPLLNFEKLLLEKGIATEEELNKI 300 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAE 357 + K + +++FA + P+P E Sbjct: 301 KEENVKEVQEAIDFAVNSPYPEPEE 325 >gi|296117381|ref|ZP_06835971.1| Pyruvate dehydrogenase (acetyl-transferring) [Gluconacetobacter hansenii ATCC 23769] gi|295976147|gb|EFG82935.1| Pyruvate dehydrogenase (acetyl-transferring) [Gluconacetobacter hansenii ATCC 23769] Length = 329 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 115/319 (36%), Positives = 176/319 (55%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +E L +YR M IR FEE+ + G + GF HL G+EA VG+ +LT+ D + Sbjct: 10 QIARETLLRSYRAMRTIRMFEERLHVEFATGEIPGFVHLYCGEEASGVGVCANLTDNDTI 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GV + +MAE+ GR G+ +GKGGSMH+ G G +GIVG Sbjct: 70 ASTHRGHGHCIAKGVGVAGMMAEIYGRSTGVCRGKGGSMHIADLGCGMLGANGIVGGGPP 129 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A ++K R+ + V +GDGA+N+G ES N+A++WNL ++V+E+N Y T+ Sbjct: 130 LICGAALSHKTLRNGAVAVAFYGDGASNEGSTLESLNLASVWNLPAVFVVEDNGYGEATA 189 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S A A T R +F +P + DG D AV + +A+ RA GP ++ + R+ Sbjct: 190 ASYACAGTQ-KARAAAFGMPYFECDGSDFFAVHQASAEVIAHARAGNGPAMLHVHLQRWY 248 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR E+ E R +HD ++ R+R+ E L EI+ V I ++V Sbjct: 249 GHFEGDAMTYRAAGEVAEARRDHDCLKLFRERVTQAALLEETALDEIDAAVADEIESAVM 308 Query: 346 FAQSDKEPDPAELYSDILI 364 A++D P +L +D+ + Sbjct: 309 QAKADPLPQEPDLLADVYV 327 >gi|284043404|ref|YP_003393744.1| pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] gi|283947625|gb|ADB50369.1| Pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] Length = 333 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 119/312 (38%), Positives = 174/312 (55%), Gaps = 3/312 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE-GD 103 + ++ L+ R M IR FE++ +L+ G+V G HLC GQEAV VG +L + GD Sbjct: 15 AALATDRLLAMLRTMHEIRLFEDETHRLFAKGLVRGSTHLCQGQEAVAVGACSALDKAGD 74 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M+ YR HG +LA G + AE+ G+ G+ GKGGSMH+ G G IVGA Sbjct: 75 TMLCTYRGHGAVLAKGAPLDRAFAEILGKADGLCAGKGGSMHLTDVSVGALGSFAIVGAH 134 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G AFA YR +D + FGDG+ N G +E+ N+AA+W L V++V+ENN Y Sbjct: 135 LPIAVGAAFAAAYRGTDAVTACFFGDGSTNIGAFHEALNLAAVWRLPVLFVLENNLYGEY 194 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + ++R + + R ++ +PG QVDG D+ AV A + AVA RA GP +IE LTYR Sbjct: 195 SPLARTTPIERLADRAAAYGMPGEQVDGNDVAAVHACVGSAVARARAGDGPTLIEALTYR 254 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 ++GHS SDPA YR E+ E DP+ + LL + + L + + + ++ Sbjct: 255 HKGHSRSDPATYRPEGELEEWL-QRDPLLLAERALL-GRGVEQPALDALREQATRDVEDA 312 Query: 344 VEFAQSDKEPDP 355 + A S +P P Sbjct: 313 LARALSWADPAP 324 >gi|284046516|ref|YP_003396856.1| pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] gi|283950737|gb|ADB53481.1| Pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] Length = 323 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 115/310 (37%), Positives = 175/310 (56%), Gaps = 2/310 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L R M+ IR FE++ + + +V G HLC GQEA +VG +L EGD M+ YR H Sbjct: 14 LGMLRRMIEIRGFEDEIQRAFTKNLVRGSTHLCNGQEACVVGACGALREGDSMVCTYRGH 73 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G +LA G AE+ GR+ G+ +GKGGSMH+ G YG IVGA + + TG+A Sbjct: 74 GAVLAMGAPLEGTFAEILGRETGLCRGKGGSMHLTDVGVGAYGSFAIVGAHLPIATGLAL 133 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K RS+ + + FGDG+ N G V+E+ N+A +W L VI+ ENN Y + ++ + Sbjct: 134 AAKLDRSEAVSLCFFGDGSMNIGAVHEAMNLAGIWKLPVIFFCENNLYGEYSPLATTTPV 193 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + R + +PG++VDG D+ AV A + +AV R+ +GP +E LTYR+RGHS +DP Sbjct: 194 EELAARAAGYGMPGVRVDGNDVVAVHAVVSEAVRRARSGEGPTFVEGLTYRHRGHSRTDP 253 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 A YR E+ E DPI ++ + LL + ++G + + + + + + A + Sbjct: 254 ARYRPEGEL-ERWLELDPIPRL-EALLRERGVADGAVTQARADAEEAVATAYAAALAAPA 311 Query: 353 PDPAELYSDI 362 P +Y D+ Sbjct: 312 PGLELIYEDV 321 >gi|20807175|ref|NP_622346.1| thiamine pyrophosphate-dependent dehydrogenase, E1 component alpha subunit [Thermoanaerobacter tengcongensis MB4] gi|254479360|ref|ZP_05092696.1| Dehydrogenase E1 component superfamily [Carboxydibrachium pacificum DSM 12653] gi|20515675|gb|AAM23950.1| Thiamine pyrophosphate-dependent dehydrogenases, E1 component alpha subunit [Thermoanaerobacter tengcongensis MB4] gi|214034699|gb|EEB75437.1| Dehydrogenase E1 component superfamily [Carboxydibrachium pacificum DSM 12653] Length = 329 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 117/326 (35%), Positives = 177/326 (54%), Gaps = 12/326 (3%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMS 98 KE + Y M+ IR +EE + Y G V G HL GQE V VG+ M Sbjct: 5 KETLMRMYLEMVTIRLYEETMAEAYQEGKYPVFNIASGPVPGEMHLAAGQEPVAVGVCMH 64 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L + D ++ +R H +A GVD ++ AE+ G+ G+ +GKGG MH+F F G Sbjct: 65 LKKEDAVVGTHRPHHFAIAKGVDLKRMTAEIFGKVTGLGRGKGGHMHLFDPDVHF-SCSG 123 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVGA + G A A K R+ ++ V FGDGAANQG +E N+AA+W L V++V E+N Sbjct: 124 IVGASIPQAVGAALAFKMRKEKRVAVAFFGDGAANQGTFHEGLNLAAIWKLPVVFVCEDN 183 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +A+ +++A + + R V++ IPG+ V D+ AV +A+ R GP IIE Sbjct: 184 SWAISVPKEKSTAISQNADRAVAYGIPGVYVGENDVLAVYEAAGEAIERARQGGGPTIIE 243 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + T R+ GH DP YR ++E+ ++ N DPI++ RK L+ N A+E +LK+++ RK Sbjct: 244 VKTDRFFGHFQGDPEVYRPKDEVQRLKQN-DPIKRFRKYLIENDIATEDELKQLDDEARK 302 Query: 339 IINNSVEFAQSDKEPDPAELYSDILI 364 + + FA+ P P E + + Sbjct: 303 RVEEAFLFARESPYPAPEEALLHVFV 328 >gi|89055572|ref|YP_511023.1| dehydrogenase, E1 component [Jannaschia sp. CCS1] gi|88865121|gb|ABD55998.1| dehydrogenase E1 component [Jannaschia sp. CCS1] Length = 675 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 112/302 (37%), Positives = 169/302 (55%), Gaps = 2/302 (0%) Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 +A ++ML IRRFE +A +L+ G++ G H +GQEA+ G L D ++T +R HG Sbjct: 25 AALKMMLRIRRFETRAKELFLQGVIKGTAHSSVGQEAIAAGACAVLEPADFILTHHRGHG 84 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 H +A G D ++ AEL GR+ G G GGSMH+ G G +GIVGA + LGTG A A Sbjct: 85 HTIAKGADLGRMFAELMGRETGYCAGLGGSMHIADFDRGILGANGIVGAGIGLGTGAALA 144 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 + + I + FGDGAAN+G +E+ N+AA+W L +I+ ENNQY + T + +A Sbjct: 145 EQLDATGAIGISFFGDGAANEGIFHEAMNLAAIWKLPLIFFCENNQYGLTTPTTAVTAGP 204 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM-SDP 292 + + RG ++ +P Q+DG D+ AV + +A RA GP +IE LTYR+ HSM ++ Sbjct: 205 SIAARGDAYGVPNEQIDGNDLPAVHMAVSRAALRARAGDGPTLIEALTYRWDDHSMRANL 264 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR+ E E + DPI ++ + + + ++E+A+S E Sbjct: 265 PAYRSEAE-EEAWKSQDPIVRLEADMSKLGELDAASYAALNDEAEADVEAAIEWARSQAE 323 Query: 353 PD 354 PD Sbjct: 324 PD 325 >gi|15898208|ref|NP_342813.1| pyruvate dehydrogenase alpha subunit (lipoamide) [Sulfolobus solfataricus P2] gi|284175729|ref|ZP_06389698.1| pyruvate dehydrogenase alpha subunit (lipoamide) [Sulfolobus solfataricus 98/2] gi|13814581|gb|AAK41603.1| Pyruvate dehydrogenase, alpha subunit (lipoamide). (pdhA-1) [Sulfolobus solfataricus P2] Length = 345 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 124/320 (38%), Positives = 176/320 (55%), Gaps = 11/320 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLY---------GMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 L+ Y+ ML+IR FEE ++Y G + G HL IGQEAV VG + + D Sbjct: 27 LNMYKRMLIIRYFEESIRKIYHEGKNPFNMASGRIRGEMHLSIGQEAVAVGTLYDIRDED 86 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +++ +R H H +A GVD + AE+ G+ G+ KGKGG MH+F F GIVGA Sbjct: 87 VVVSTHRPHHHAIAKGVDLKGLAAEILGKATGLCKGKGGHMHLFDKSKNF-ACSGIVGAS 145 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G AFA KY D + + G+GAAN G E+ NIA+ W L +I VIE+N+YA Sbjct: 146 FPQAAGAAFAFKYLGKDNVAISFAGEGAANHGTFAETLNIASAWELPLIIVIEDNKYADS 205 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S + T +RG+++N+P VDGMD+ V +T KA+ R GP +IE LTYR Sbjct: 206 TPKSFVMSTTFHYQRGLAYNVPSYLVDGMDVIDVYSTSKKAIERARKGFGPTLIEALTYR 265 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 Y GH D YRT+EE+ E S+ DPI ++ RLL +A L + RK + + Sbjct: 266 YVGHFEGDGEEYRTKEEV-EFWSSLDPIRRLENRLLRLNYADSDILARLREEARKQVQEA 324 Query: 344 VEFAQSDKEPDPAELYSDIL 363 ++FA + K P+ + + + Sbjct: 325 IDFAINSKYPELTDAFGGVF 344 >gi|307266776|ref|ZP_07548301.1| Pyruvate dehydrogenase (acetyl-transferring) [Thermoanaerobacter wiegelii Rt8.B1] gi|306918218|gb|EFN48467.1| Pyruvate dehydrogenase (acetyl-transferring) [Thermoanaerobacter wiegelii Rt8.B1] Length = 329 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 116/326 (35%), Positives = 177/326 (54%), Gaps = 12/326 (3%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMS 98 KE + Y M+ IR +EE + Y G V G HL GQE V VG+ M Sbjct: 5 KETLMRMYLEMVTIRLYEETMAEAYQEGKYPVFNIASGPVPGEMHLAAGQEPVAVGVCMH 64 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L + D ++ +R H +A GVD ++ AE+ G+ G+ +GKGG MH+F F G Sbjct: 65 LNKEDAVVGTHRPHHFAIAKGVDLKRMTAEIFGKVTGLGRGKGGHMHLFDPDVHF-SCSG 123 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVGA + G A K R+ ++ V FGDGAANQG +E N+AA+W L V++V E+N Sbjct: 124 IVGASIPQAVGAALTFKMRKEKRVAVAFFGDGAANQGAFHEGLNLAAIWKLPVVFVCEDN 183 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +A+ +++A + + R V++ IPG+ V D+ AV KAV R +GP +IE Sbjct: 184 SWAISVPKQKSTAISRNADRAVAYGIPGIYVGENDVLAVYEAAGKAVERARQGEGPTLIE 243 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + T R+ GH DP YR ++E+ ++ N DPI++ RK L+ N A E ++K+++ RK Sbjct: 244 VKTDRFFGHFQGDPEVYRPKDEVPRLKQN-DPIKRFRKYLIENGIAKEAEIKQLDDEARK 302 Query: 339 IINNSVEFAQSDKEPDPAELYSDILI 364 + ++ FA+ P P E + + Sbjct: 303 HVEDAFLFARESPYPAPEEALLHVFV 328 >gi|307287225|ref|ZP_07567293.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Enterococcus faecalis TX0109] gi|315641491|ref|ZP_07896563.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Enterococcus italicus DSM 15952] gi|306501682|gb|EFM70974.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Enterococcus faecalis TX0109] gi|315482779|gb|EFU73303.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Enterococcus italicus DSM 15952] Length = 330 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 107/321 (33%), Positives = 178/321 (55%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 ++++ K+Q + M IR FE + ++ G + GF HL G+EA+ G+ +LT+ Sbjct: 8 KMTKMTKDQAKWILKTMYDIRNFENQVHDIFTTGEIPGFVHLYAGEEAIATGVCANLTDD 67 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HGH +A G D +MAE+ G++ G++KGKGGSMH+ G G +G+VG Sbjct: 68 DYITSTHRGHGHCIAKGCDLDGMMAEIYGKETGLNKGKGGSMHIADVGKGMLGANGMVGG 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + G NKY ++ + V FGDGAAN+G +E N+A++W L VI+V ENN +A Sbjct: 128 GFPIAVGAGLRNKYLKTKDVAVCFFGDGAANEGTFHEGINMASIWKLPVIFVNENNSFAE 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T +S ++R ++ IPG++VDG D+ AV +A+ R +GP ++E +TY Sbjct: 188 ATPQWYSSGSKTIAERAAAYGIPGVRVDGDDLFAVYEATGEAIERARKGEGPTLVECVTY 247 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D Y+ + + R + D I + ++ + K ++ + +EI I + Sbjct: 248 RNYGHFEGDEQKYKNIDGEEKNRQDRDCIPEFIEKAIAKKLLTKKEAEEIAEKSTTDIAH 307 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 +++FA+ P P LY D+ Sbjct: 308 AIKFAEESPVPRPEALYEDVF 328 >gi|326391749|ref|ZP_08213271.1| Pyruvate dehydrogenase (acetyl-transferring) [Thermoanaerobacter ethanolicus JW 200] gi|325992213|gb|EGD50683.1| Pyruvate dehydrogenase (acetyl-transferring) [Thermoanaerobacter ethanolicus JW 200] Length = 329 Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 116/326 (35%), Positives = 178/326 (54%), Gaps = 12/326 (3%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMS 98 KE + Y M+ IR +EE + Y G V G HL GQE V VG+ M Sbjct: 5 KETLMRMYLEMVTIRLYEETMAEAYQEGKYPVFNIASGPVPGEMHLAAGQEPVAVGVCMH 64 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L + D ++ +R H +A GVD ++ AE+ G+ G+ +GKGG MH+F F G Sbjct: 65 LKKEDAVVGTHRPHHFAIAKGVDLKRMTAEIFGKVTGLGRGKGGHMHLFDPDVHF-SCSG 123 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVGA + G A A K R+ ++ V FGDGAANQG +E N+AA+W L V++V E+N Sbjct: 124 IVGASIPQAVGAALAFKMRKEKRVAVAFFGDGAANQGAFHEGLNLAAIWKLPVVFVCEDN 183 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +A+ +++A + + R V++ IPG+ V D+ AV +AV R +GP +IE Sbjct: 184 SWAISVPKQKSTAISRNADRAVAYGIPGIYVGENDVLAVYDAAGEAVERARQGEGPTLIE 243 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + T R+ GH DP YR ++E+ ++ N DPI++ RK L+ N A E ++K+++ RK Sbjct: 244 VKTDRFFGHFQGDPEVYRPKDEVPRLKQN-DPIKRFRKYLIENGIAKEAEIKQLDDEARK 302 Query: 339 IINNSVEFAQSDKEPDPAELYSDILI 364 + ++ FA+ P P E + + Sbjct: 303 RVEDAFLFARESPYPAPEEALLHVFV 328 >gi|288957749|ref|YP_003448090.1| pyruvate dehydrogenase E1 component, alpha subunit [Azospirillum sp. B510] gi|288910057|dbj|BAI71546.1| pyruvate dehydrogenase E1 component, alpha subunit [Azospirillum sp. B510] Length = 327 Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 112/318 (35%), Positives = 173/318 (54%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 K++ L+AYR M IR FEE+ + G + GF HL G+EA G+ M L + D++ Sbjct: 8 LGKDELLTAYRTMRTIREFEERLHVDFAKGDIPGFVHLYAGEEACATGIMMHLNDNDRIA 67 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A GVD +MAE+ GR G +GKGGSMH+ G G +GI+GA L Sbjct: 68 STHRGHGHCIAKGVDVHAMMAEIYGRSTGACRGKGGSMHIADLSKGMMGANGILGAGAPL 127 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A A K R + + GDGA+NQG ES N+AA+WNL V++V+ENN YA T++ Sbjct: 128 ICGAALAAKVRGDRGVGITFVGDGASNQGTFLESLNLAAVWNLPVVFVVENNGYAESTAM 187 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A + ++ R F +PG+ VDG D AV + + R GP ++E R+ G Sbjct: 188 EWAVSCDSYVDRATGFGMPGVTVDGTDFFAVYEAAGEIIRRARDGGGPALLECNMVRFYG 247 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D YR + E+ +R++ D + + +R++ +L+ I+ V +I ++ Sbjct: 248 HFEGDAQTYRAKGELEAIRASRDCLTILSERVIEAGVIGRDELQAIDREVNALIEDATRA 307 Query: 347 AQSDKEPDPAELYSDILI 364 A++ P +L D+ + Sbjct: 308 AKAAPLPVAEDLLRDVYV 325 >gi|91786664|ref|YP_547616.1| pyruvate dehydrogenase (lipoamide) [Polaromonas sp. JS666] gi|91695889|gb|ABE42718.1| Pyruvate dehydrogenase (lipoamide) [Polaromonas sp. JS666] Length = 337 Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 118/290 (40%), Positives = 170/290 (58%), Gaps = 6/290 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++K L+ ML IRR EEK QLYG + GF HL IG+EAV VG +L D ++ Sbjct: 16 WDKAFALAVLAGMLRIRRMEEKCAQLYGEQKIRGFLHLYIGEEAVAVGALRALQPQDNVV 75 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YREHGH L G+ + IMAE+ G++ G S+G+GGSMH+F FYGG+ IVG + L Sbjct: 76 ATYREHGHALLRGLAMNGIMAEMYGKREGCSRGRGGSMHLFDRATRFYGGNAIVGGGLPL 135 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A A+K + FG+GA +G +E+ N+AALW L V++ ENN YAMGT++ Sbjct: 136 AAGLALADKMAGRQALTACFFGEGAIAEGAFHEAANLAALWQLPVLFCCENNLYAMGTAL 195 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +R+ AQT+ + S+ + +Q DGMD+ AV + ++ R+ P+ +E+ TYR+R Sbjct: 196 ARSEAQTDLCMKAASYGMATVQADGMDVVAVFDAVQRSAQQVRSQGRPVFVELKTYRFRA 255 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 HSM DP YR + E+ ++ PI RL ++G L E E V Sbjct: 256 HSMFDPELYRDKAEVQAWKTR-GPIHTFTARL-----KAQGSLTEDEFLV 299 >gi|325970491|ref|YP_004246682.1| pyruvate dehydrogenase (acetyl-transferring) [Spirochaeta sp. Buddy] gi|324025729|gb|ADY12488.1| Pyruvate dehydrogenase (acetyl-transferring) [Spirochaeta sp. Buddy] Length = 658 Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 112/298 (37%), Positives = 172/298 (57%), Gaps = 1/298 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +F+KEQ SA +M+ R FEE + + G HL IGQEA G+ ++L +GD + Sbjct: 2 DFSKEQAQSALSIMVRSRHFEECIDDFFKRKEMHGTTHLSIGQEACQAGLALALDQGDWI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G + K+ +E+ G GI KG GGSMHM + G +VG+ V+ Sbjct: 62 VPTHRCHGHTIARGTNERKMFSEMFGSADGICKGLGGSMHMTDVQTWNAGSSAVVGSGVN 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G+AFA K + S I V FGDGA ++G V+ES N+A++W+L +++ ENN Y M + Sbjct: 122 LAAGLAFALKMQESQAISVAIFGDGATSRGSVHESMNLASVWSLPILFFCENNNYGMSAA 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 SR + ++ + R S++I VDG D++AV +AVAY R+ P +E+ TYR Sbjct: 182 ASRMISTSSIASRADSYSISHATVDGNDVQAVYRAASEAVAYIRSTGKPYFLEVKTYRCC 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS SDP YR+R+E S DPI + ++ + +E ++ + + RK I+ + Sbjct: 242 GHSKSDPCLYRSRDE-EAAWSERDPIFLFSRTMVESGLFTEEEVSRLILEARKHIDEA 298 >gi|134101286|ref|YP_001106947.1| acetoin dehydrogenase E1 component, alpha subunit [Saccharopolyspora erythraea NRRL 2338] gi|291008851|ref|ZP_06566824.1| acetoin dehydrogenase E1 component, alpha subunit [Saccharopolyspora erythraea NRRL 2338] gi|133913909|emb|CAM04022.1| acetoin dehydrogenase E1 component, alpha subunit [Saccharopolyspora erythraea NRRL 2338] Length = 329 Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 116/312 (37%), Positives = 170/312 (54%), Gaps = 1/312 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M IR FEE+ + + G + GF HL G+EA G+ L + D + + +R H Sbjct: 17 LDGYRTMRTIREFEERVHEEFAKGDIPGFVHLYAGEEASATGVCAHLDDRDTIASTHRGH 76 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH +A GVD +++MAE+ GR+ G KGKGGSMH+ G G +GIVG L G A Sbjct: 77 GHCIAKGVDVTEMMAEIYGRRTGACKGKGGSMHIADLSKGMLGANGIVGGGPPLICGTAL 136 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K + + + V FGDGA+NQG E+ N+A++WNL I+V ENN YA T+ + + A Sbjct: 137 AAKQQGTRGVGVAFFGDGASNQGTTLEAMNLASVWNLPAIFVAENNGYAEATAATWSVAA 196 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 N + R F +PG+ VDG D AV +AV R GP +IE+ RY GH D Sbjct: 197 DNIADRAAGFGMPGVIVDGFDFFAVHEAAGEAVERARDGGGPTLIEVKLTRYYGHFEGDQ 256 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR +E+ R+ D ++ R R+ ++ L ++ V ++I+ +V A + Sbjct: 257 QTYRG-DEVARARAELDCLKTFRSRVTSAGQLTDEQLDSVDREVTELIDRAVATALEAPK 315 Query: 353 PDPAELYSDILI 364 P +L +D+ I Sbjct: 316 PTGDDLETDVYI 327 >gi|329115241|ref|ZP_08243996.1| Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Acetobacter pomorum DM001] gi|326695684|gb|EGE47370.1| Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Acetobacter pomorum DM001] Length = 333 Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 112/317 (35%), Positives = 175/317 (55%), Gaps = 1/317 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + ++E L AYR M IR FEE+ + G + GF HL G+EA VG+ +LT+ D + Sbjct: 14 QISREALLRAYRSMRTIRVFEERLHVEFATGEIPGFVHLYCGEEASAVGVCANLTDNDTI 73 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GV+ +MAE+ GR G+ +GKGGSMH+ G G +GIVG Sbjct: 74 ASTHRGHGHCIAKGVEVGGMMAEIYGRHTGVCRGKGGSMHIADLSKGMLGANGIVGGGPP 133 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A ++K + + + V FGDGA+N+G ES N+A++W+L ++V+E+N Y T Sbjct: 134 LICGAALSHKTLKDNGVAVAFFGDGASNEGTTLESMNLASVWHLPAVFVVEDNGYGEATG 193 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S A A T R F +P +G D AV T A+ + R+ +GP+++ + R+ Sbjct: 194 ASYACAGTQ-KDRAAGFGLPYFSCEGDDFFAVYETARNAIDHARSGEGPVMLHVHLSRWY 252 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR E+ E + +HD +++ R R + EGD+ EI+ V + ++V Sbjct: 253 GHFEGDAMTYRKAGEVAEQKKDHDCLKKFRARAVAENLLPEGDMDEIDAAVADEVESAVV 312 Query: 346 FAQSDKEPDPAELYSDI 362 A+ P +L +D+ Sbjct: 313 TAKQAPWPQDKDLMADV 329 >gi|328542712|ref|YP_004302821.1| Dehydrogenase, E1 component [polymorphum gilvum SL003B-26A1] gi|326412458|gb|ADZ69521.1| Dehydrogenase, E1 component [Polymorphum gilvum SL003B-26A1] Length = 665 Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 116/303 (38%), Positives = 175/303 (57%), Gaps = 1/303 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++ L R M+ IRRFE K +LY + GF HL G+EA+ VG+ LTE D+++ Sbjct: 8 LSRAHALDLLRAMIRIRRFEAKCAELYTQEKIRGFLHLYDGEEAIAVGVIPLLTERDRIV 67 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YREHGH LA G+ ++AE+ G G + G+GGSMH+FS + FYGG+ IVG + L Sbjct: 68 ATYREHGHALARGLPMGAVLAEMYGVAEGCAGGRGGSMHLFSREANFYGGNAIVGGGLPL 127 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A A++ R D++ FG+GA +G+ +ES N+A+LW L V++V ENN YAMGT++ Sbjct: 128 AAGLALADRMRGEDRVTACFFGEGAVAEGEFHESLNLASLWQLPVLFVCENNGYAMGTAL 187 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + A T+ + ++ + G DGMD+ AV+A +A+ R P +E TYR+R Sbjct: 188 DLSEAVTDIRAKAAAYAVDGEVADGMDVVAVEAATRRALEAIRDTGRPRFLECRTYRFRA 247 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSM D YR + E+ E R PI + + L + ++ IE V I +V F Sbjct: 248 HSMFDAQLYRDKAEVEEWRRK-GPIVRFQGWLEQSGLVHVDEIAAIETEVEAEIAEAVAF 306 Query: 347 AQS 349 +++ Sbjct: 307 SEA 309 >gi|302555574|ref|ZP_07307916.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces viridochromogenes DSM 40736] gi|302473192|gb|EFL36285.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces viridochromogenes DSM 40736] Length = 326 Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 112/293 (38%), Positives = 163/293 (55%), Gaps = 3/293 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+AY M +IRR E+ A L+ G+V G HL GQEAV VG +L D + YR H Sbjct: 8 LTAYERMAVIRRTEKAAHDLFLQGLVKGTTHLAAGQEAVAVGASAALRPDDYVFATYRGH 67 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 H LA G + +AEL R G+ K KGGSMH+ G G + IVG+ + + G A+ Sbjct: 68 HHALARGATPQECLAELMSRATGLCKAKGGSMHLTKAATGMLGSYAIVGSHLPMAVGAAW 127 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA- 231 + + R +D++ V FGDGA N G +ES N+AA+W L V++V ENN Y T ++ +A Sbjct: 128 SARLRGTDQLAVAFFGDGATNIGAFHESLNLAAVWKLPVLFVCENNLYMEYTPIADVTAV 187 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + R ++ IPG VDG D+ AV+ +++ R GP ++E TYR+ GHS +D Sbjct: 188 PRPAADRAPAYGIPGEVVDGNDVMAVEEAVERLARRARGGDGPAVLEAATYRHFGHSRAD 247 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 PA YR EE+ + HDP++ R RL +E + E + R ++ +V Sbjct: 248 PAAYRPAEEVERWLA-HDPLDLARGRLAELG-VAEATVAEADDRARAVVERAV 298 >gi|254451721|ref|ZP_05065158.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Octadecabacter antarcticus 238] gi|198266127|gb|EDY90397.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Octadecabacter antarcticus 238] Length = 325 Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 122/319 (38%), Positives = 175/319 (54%), Gaps = 3/319 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N E+ L Y M+ IR FE+ A QLY + G H+ GQEAV VG+ +L + D++ + Sbjct: 7 NTEEYLRMYSQMVRIRTFEDNANQLYLSAKMPGLTHMYSGQEAVAVGICEALKKTDKITS 66 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A G + ++ EL G++ G +GKGGSMH+ NG G + IVG + + Sbjct: 67 THRGHGHCVAKGANFKEMFCELLGKEEGYCRGKGGSMHIADQSNGNLGANAIVGGSMGIA 126 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG AF K D + V FGDGA QG +YE N+AALWNL VIY ENN Y+ T + Sbjct: 127 TGSAFTAKMLGKDDVTVCFFGDGATAQGILYEVMNMAALWNLPVIYACENNGYSEYTKTA 186 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +A + + R +F I VDG D+ AV +K VA R +GP IE++TYRY GH Sbjct: 187 EIAAGS-ITARAEAFGIEAFTVDGQDVLAVNELTEKLVARSRKGEGPFFIELMTYRYHGH 245 Query: 288 SMSDPAN--YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + D YR+++E ++ DPI + L AS+ DL I + +VE Sbjct: 246 HVGDINREYYRSKDEEKLWKTERDPITKFATWLTKEGIASDADLAAITAEISADAAAAVE 305 Query: 346 FAQSDKEPDPAELYSDILI 364 +A + K PD +E+ + + Sbjct: 306 YALAAKYPDISEVDQHVFV 324 >gi|160947287|ref|ZP_02094454.1| hypothetical protein PEPMIC_01220 [Parvimonas micra ATCC 33270] gi|158446421|gb|EDP23416.1| hypothetical protein PEPMIC_01220 [Parvimonas micra ATCC 33270] Length = 324 Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 109/317 (34%), Positives = 182/317 (57%), Gaps = 2/317 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K++ L Y MLLIR F+ + +LY G + G H +G+EA VG + + D M Sbjct: 6 KLTKKELLEMYDKMLLIRYFDMELSKLYSRGFIHGMTHYSVGEEAANVGAIYPMRKEDLM 65 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG +A G+D +K+MAE+ G+ G KG+GGSMH+++ + G +GIVG Sbjct: 66 YSNHRGHGQTIAKGIDINKMMAEILGKSTGQCKGRGGSMHLYNLEVNNMGCNGIVGGGHG 125 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L TG A A K +++ + V C G+ A N+G +E N+A++W L +I+ + NN+Y + S Sbjct: 126 LSTGAALAQKMKKTGNVVVCCMGESATNEGSFHECLNMASIWKLPLIFYVINNKYGISMS 185 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 R+ R ++ + + V DG ++ V M +A+ Y R GP+++E +YR+ Sbjct: 186 QQRSMTVERVVDRAEAYKVKSIYVEDGNNVLDVYDAMSEALDYAREGNGPVLVEAKSYRW 245 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS SD YR ++E++E + DP +K L+ NK A+E +L E+E +V+K+I +++ Sbjct: 246 FGHSASDAGKYRDKKEVDEWKEK-DPNVAFKKYLVENKIATESELDEMEESVKKVIADAI 304 Query: 345 EFAQSDKEPDPAELYSD 361 FA+ D + +D Sbjct: 305 TFAKESPLADEKDACTD 321 >gi|46447367|ref|YP_008732.1| putative pyruvate dehydrogenase (lipoamide), E1 component, alpha chain [Candidatus Protochlamydia amoebophila UWE25] gi|46401008|emb|CAF24457.1| putative pyruvate dehydrogenase (lipoamide), E1 component, alpha chain [Candidatus Protochlamydia amoebophila UWE25] Length = 342 Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 114/322 (35%), Positives = 181/322 (56%), Gaps = 5/322 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + + ++ ML IR FE +A Y G +GGF H +GQEA+ ++ + + Sbjct: 18 IKKLGPQALIECFQQMLKIRNFELRAESAYQQGKIGGFFHAYVGQEAIQTAAVQAIGQSN 77 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 T+YR H L G +++MAEL GR G +KG+GGSMH F+ + GG GIV Q Sbjct: 78 WYATSYRCHALALLLGATPNELMAELYGRATGNAKGRGGSMHFFTDR--LLGGFGIVTGQ 135 Query: 164 VSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V + TG AFA KY+ + VCF GDGA QG +ES N+A+LWNL IYVIENNQ+ M Sbjct: 136 VPIATGAAFALKYKGNKNEVAVCFMGDGAVPQGSFHESLNLASLWNLPCIYVIENNQWGM 195 Query: 223 GTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 GT++ +A + ++ S +N+ +DGMD + + P+++E++T Sbjct: 196 GTAIQKAVSVKRLAEDKASGYNMKAYTLDGMDFFNCYGGFAQIHQEVLQRQRPVLVEVVT 255 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R++GHS+SDP YR ++ + ++ + DPI ++ L+ +E +K++ R+ I Sbjct: 256 ERFKGHSISDPGLYRAKDTLKQIMAK-DPILALQAVLIKKGILTEDMVKQMNKENREKII 314 Query: 342 NSVEFAQSDKEPDPAELYSDIL 363 ++ FA++ PDP L D+ Sbjct: 315 EAMSFAENSPWPDPQTLEEDVF 336 >gi|121710190|ref|XP_001272711.1| pyruvate dehydrogenase [Aspergillus clavatus NRRL 1] gi|119400861|gb|EAW11285.1| pyruvate dehydrogenase [Aspergillus clavatus NRRL 1] Length = 347 Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 132/334 (39%), Positives = 175/334 (52%), Gaps = 69/334 (20%) Query: 40 EGFEVSEFN---------KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEA 90 E FE F+ K + YR ML IRR E GQEA Sbjct: 51 ESFETYNFDPPPYTVDTTKRKLKDMYRDMLSIRRME------------------STGQEA 92 Query: 91 VIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK 150 V VG++ ++T+ D++ITAYR HG G I+ EL GRQ GIS GKGGSMHMF Sbjct: 93 VAVGIEHAITKEDKLITAYRSHGFTFMRGASIRSIVGELLGRQDGISHGKGGSMHMFL-- 150 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 F+GG+GIVGA V +G GIAFA +Y + + +GDGAANQGQVYE+FN+A LWNL Sbjct: 151 ESFFGGNGIVGAHVPVGAGIAFAQQYNDGSNVTIDIYGDGAANQGQVYEAFNMAKLWNLP 210 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +++ ENN+Y MGTS RASA T++ KRG IPG++V+GMD+ AV A M + +A Sbjct: 211 ILFGCENNKYGMGTSAERASAITDYHKRGQY--IPGLRVNGMDVLAVLAAMKHGKQFIQA 268 Query: 271 HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 KGP+I ++ R+RL+ +E + K Sbjct: 269 GKGPLIYDL-----------------------------------RERLIEWGIITEDEAK 293 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 ++ +V IIN V A+ EP EL D+L Sbjct: 294 AMDKDVHGIINQEVAEAEKMTEP---ELRLDVLF 324 >gi|226946628|ref|YP_002801701.1| pyruvate dehydrogenase E1 subunit alpha [Azotobacter vinelandii DJ] gi|226721555|gb|ACO80726.1| pyruvate dehydrogenase E1 alpha subunit [Azotobacter vinelandii DJ] Length = 338 Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 115/267 (43%), Positives = 159/267 (59%), Gaps = 5/267 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +EF ++ L ML IR EE+A +LYG G + GF HL IGQEA+ VG+ +L D Sbjct: 19 AEFARQLLLD----MLRIRYLEERAAELYGEGKIRGFLHLYIGQEAIAVGVLHALASDDA 74 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 ++ YREHGH L GV I+AE+ G + G S+G+GGSMH+F K F+GG+ IVG + Sbjct: 75 VVATYREHGHALLKGVPMRAIVAEMYGCREGCSRGRGGSMHLFDAKTRFFGGNAIVGGSL 134 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G+A A + R ++ FG+GA +G ES N+AALW L V++ ENN YAMGT Sbjct: 135 PLAVGLALAERMRDGKRLTACFFGEGALAEGAAAESLNLAALWRLPVLFCCENNLYAMGT 194 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S++R+ AQT+ + +F +P VDGMD+ AV A+ +A GP +E TYR+ Sbjct: 195 SLARSQAQTDLCAKVHAFKVPARSVDGMDVVAVHEATRAALGQMQAGCGPCFLEFRTYRF 254 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPI 311 R SM+DP R + E+ E PI Sbjct: 255 RARSMADPEPCRDKAEV-EAWKKRGPI 280 >gi|312960494|ref|ZP_07775001.1| acetoin dehydrogenase E1 component, alpha subunit [Pseudomonas fluorescens WH6] gi|311285228|gb|EFQ63802.1| acetoin dehydrogenase E1 component, alpha subunit [Pseudomonas fluorescens WH6] Length = 326 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 118/320 (36%), Positives = 179/320 (55%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + + +Q L AY +M IR FEE+ + G + GF HL GQEA G+ + L + D Sbjct: 3 THLSTDQLLHAYTVMRTIRDFEERLHVEFATGEIPGFVHLYAGQEASAAGVMVHLNDEDC 62 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ + G G +GIVGA Sbjct: 63 IASNHRGHGHCIAKGVDVFGMMAEIYGKKTGVCGGKGGSMHIADQEKGMLGANGIVGAGA 122 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A+K + S + V FGDG +N+G V+E+ N+AA+ L ++V ENN YA T Sbjct: 123 PLAAGAALASKLKGSQGVAVAFFGDGGSNEGAVFEAMNLAAIMKLPCLFVAENNGYAEAT 182 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + A + ++R V F +PG+ VDG D AV + AV R +GP ++E+ R+ Sbjct: 183 GSGWSVACKDIAERAVGFGMPGVIVDGNDFFAVHQALGVAVERARNGEGPTLVEVKLSRF 242 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR +E+ +R + D + R R W G + I+ V ++I ++V Sbjct: 243 YGHFEGDAQTYRGVDEVKNLRESQDCLVLFRTRCQAEGWLDAGQFERIDGEVAQLIEDAV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 A+SD +P A+L SD+ + Sbjct: 303 RLAKSDPKPQAADLLSDVYV 322 >gi|146303982|ref|YP_001191298.1| pyruvate dehydrogenase [Metallosphaera sedula DSM 5348] gi|145702232|gb|ABP95374.1| Pyruvate dehydrogenase (acetyl-transferring) [Metallosphaera sedula DSM 5348] Length = 344 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 128/325 (39%), Positives = 176/325 (54%), Gaps = 14/325 (4%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY---------GMGMVGGFCHLCIGQEAVI 92 E + F +Q L+ Y M LIR FEE G Y G + G HL GQEAV Sbjct: 16 LESANFTLDQLLNMYYQMNLIREFEEAIGAKYYEGKNPFNMASGPIRGEMHLSSGQEAVA 75 Query: 93 VGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG 152 VG+ +L + D +++ +R H H +A G D K+ AE+ G+ G+ GKGG MH+F K Sbjct: 76 VGVGGNLRKEDVVVSTHRPHHHAIAKGTDIRKLAAEIFGKSTGLCGGKGGHMHLFD-KEV 134 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 + GIVGA G AFA KYR D + V G+GAAN G YE+ N A+LW L +I Sbjct: 135 RFSCSGIVGASFPQAAGAAFAFKYRGEDNVAVAFAGEGAANHGTFYETLNAASLWELPLI 194 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 VIE+N YA T S A A + +R +S N+P VDGMD+ V KAV R+ Sbjct: 195 VVIEDNMYADSTPKSVALATPHHFQRAMSLNVPSFLVDGMDVIDVYLATRKAVQRARSGG 254 Query: 273 GPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 GP +IE +TYR+RGH D YR R+E+ E+ DPI ++ RL K E + E Sbjct: 255 GPSLIEAVTYRFRGHFEGDGQEYRERDEV-ELWRVMDPITRLGNRL--TKLGVEKERLEN 311 Query: 333 E-MNVRKIINNSVEFAQSDKEPDPA 356 E R+ + ++++FA+ P+P+ Sbjct: 312 ERRKARERVEDALKFAEESPYPEPS 336 >gi|295395075|ref|ZP_06805284.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Brevibacterium mcbrellneri ATCC 49030] gi|294972023|gb|EFG47889.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Brevibacterium mcbrellneri ATCC 49030] Length = 320 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 111/319 (34%), Positives = 178/319 (55%), Gaps = 2/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ + AY M IR FE++ + G + GF HL G+EA+ VGM +LT D++ Sbjct: 2 EPTKEQLIGAYDKMSKIRAFEDRLHKENLTGDIPGFIHLYAGEEAIAVGMCENLTPADKI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D +K+M E+ G Q G+ GKGGSMH+ G G +GIVG Sbjct: 62 ASTHRGHGHCIAKGSDVTKMMLEIFGAQDGLCHGKGGSMHIADLDTGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G KYR + V GDG +NQG +E+ N+A + L VI+V ENN T Sbjct: 122 ITVGAGLTAKYRGEGHVAVSFTGDGGSNQGTTFEAINMAVVLQLPVIFVFENNGMGEATG 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 A + + R F +P + VDG + + +AV R GP +IE ++YRY Sbjct: 182 AEFAVGSKDIASRAAGFGLPAVTVDGNNFFDMYQASREAVHRARNGGGPTVIEAVSYRYY 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR ++++ + ++ +DP++ R ++ A E L +I+ + ++++ +V+ Sbjct: 242 GHFEGDPGLYREQDQVAQYKAKNDPLQIFRAQVEGQISAEE--LDKIDESNIELVDEAVK 299 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ K+PDP+E+++D+ + Sbjct: 300 KARAAKQPDPSEVHTDVYV 318 >gi|167842134|ref|ZP_02468818.1| Pyruvate dehydrogenase (lipoamide) [Burkholderia thailandensis MSMB43] Length = 282 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 111/275 (40%), Positives = 159/275 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ ++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L + D Sbjct: 5 NQLGSDRLLHAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGAMLHLNDVDY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ GR+ G+ +GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVHGMMAEIYGRRTGVCRGKGGSMHIADLAKGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K R + + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKLRGTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 185 ASSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARGGGGPTLVEVKFSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 GH D YR E+ ++R D +++ +R++ Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKRFEERVV 279 >gi|227820219|ref|YP_002824190.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Sinorhizobium fredii NGR234] gi|227339218|gb|ACP23437.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alphasubunit [Sinorhizobium fredii NGR234] Length = 325 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 115/319 (36%), Positives = 175/319 (54%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + + ++ ++ YR M IRRFEE+ Q G + G HL GQEA VG+ + L + D + Sbjct: 5 QLSHDELVNVYRTMRTIRRFEERVMQEMATGDIPGNTHLYAGQEASAVGVCLQLRDDDYI 64 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GVD +MAEL GR G GKGGS H+ + G G +GIV A Sbjct: 65 SSTHRGHGHSIAKGVDIDSMMAELFGRASGTCGGKGGSQHIADLRKGMLGANGIVAAGAP 124 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A + K + ++ V GDGA N+G + ESFN+A +W L +I+VIE+N + T+ Sbjct: 125 ITCGAALSAKLLGTGQVAVAFAGDGAMNEGVMSESFNLAKIWMLPIIFVIEDNGFGEATA 184 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + SA + F++R S++IP ++VDG D+ +V A +AV RA GP ++ + RY Sbjct: 185 NAFVSAGS-FTRRAESYDIPTIEVDGTDVFSVYAAAGEAVERARAGGGPTMLHVHVPRYY 243 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YRT EE MR D + R+R+ +L ++ V I +V Sbjct: 244 GHYSGDPDTYRTPEEKAAMRRERDCLSNFRQRVKEVSLVETAELDAVDEQVEAAIGRAVS 303 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ P + L +D+ + Sbjct: 304 AARAAPFPPTSALTTDVYV 322 >gi|269839826|ref|YP_003324519.1| pyruvate dehydrogenase (acetyl-transferring) [Thermobaculum terrenum ATCC BAA-798] gi|269791556|gb|ACZ43696.1| Pyruvate dehydrogenase (acetyl-transferring) [Thermobaculum terrenum ATCC BAA-798] Length = 335 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 123/300 (41%), Positives = 183/300 (61%), Gaps = 3/300 (1%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K++ + Y+ ML IR+ EEK G L+ G+ G HL IGQEA VG+ + D +++ Sbjct: 2 KDELIGYYQQMLRIRKCEEKIGWLFSRGLTMGTAHLSIGQEASAVGVIAASRPEDYVVST 61 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R HGH++A G D ++++AE+ GR+ G +GKGGS H+ + F G +GI G + + T Sbjct: 62 HRGHGHLIAKGADPARLIAEICGRETGFCRGKGGSQHIAVKEINFLGTNGITGGGIPVAT 121 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G A KYRR+ ++ + FGDGAANQG +ES N+A++W L ++YV ENN YAM T Sbjct: 122 GAALTAKYRRTGQVVLCFFGDGAANQGTFHESLNMASVWKLPIVYVCENNGYAMFTPSCD 181 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++ + + R ++NIPG+ DGMD+R V+ A+ R+ GP ++E+ TYR+ GHS Sbjct: 182 VTSVRDVAVRAAAYNIPGVTADGMDVRVVRDVAAVAINRARSGGGPTLLELKTYRFCGHS 241 Query: 289 MSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SD YR REEI E S DPI +R+ LL E L +IE V++ ++ +VE A Sbjct: 242 KSDNGTKYRPREEIEEW-SRRDPIANLRRDLLEMG-VPEMLLIDIEREVQQEMDLAVEHA 299 >gi|224371811|ref|YP_002605975.1| PdhA [Desulfobacterium autotrophicum HRM2] gi|223694528|gb|ACN17811.1| PdhA [Desulfobacterium autotrophicum HRM2] Length = 319 Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 119/316 (37%), Positives = 172/316 (54%), Gaps = 1/316 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + EQ + Y M+ IR+FE + + G + GF HL IG+EAV G L D + Sbjct: 3 LSNEQMVGMYTTMVKIRQFETRVQGFFAEGKIPGFVHLYIGEEAVATGACAGLRITDYIT 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH++A G D ++M E+ GR G KGKGGSMH+ G G +GIVG L Sbjct: 63 STHRGHGHLIAKGGDLKQMMGEIFGRTTGYCKGKGGSMHIADIDLGILGANGIVGGGGPL 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A K R+ D + V FGDGA+NQG E+ N+A+ W L V++V ENN Y + Sbjct: 123 ANGAGLAIKARKEDNVAVCFFGDGASNQGTTQEALNLASAWKLPVVFVNENNGYGISCPT 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S++ A T+ + R +++IPG+ VDG ++ V + +AV R+ GP +IE TYR+RG Sbjct: 183 SKSMAVTDIADRAAAYDIPGVVVDGNNVLDVFEAVSEAVKRARSGDGPSLIECKTYRWRG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D YR E+ E DPI + +LL + + EI+ V K + +V F Sbjct: 243 HFEGDACVYREPGEL-ERWVEKDPIPRFENKLLAEGILTPETVAEIKTAVEKELETAVTF 301 Query: 347 AQSDKEPDPAELYSDI 362 A PDP++L D+ Sbjct: 302 ALDSPLPDPSDLTRDV 317 >gi|311108071|ref|YP_003980924.1| pyruvate dehydrogenase E1 component subunit alpha [Achromobacter xylosoxidans A8] gi|310762760|gb|ADP18209.1| pyruvate dehydrogenase E1 component subunit alpha [Achromobacter xylosoxidans A8] Length = 324 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 121/310 (39%), Positives = 177/310 (57%), Gaps = 3/310 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V+ NKEQ L AYR ML IR E + G+L+ G V GF HL IGQEAV M M L D Sbjct: 2 VASANKEQLLDAYRRMLRIRLAELRLGRLFADGEVPGFIHLSIGQEAVAAAMGMVLRPDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH LA G+D + EL R+ GI KG+GGSMH+ + G G + IVGA Sbjct: 62 TVASTHRGHGHALAKGIDIEEFFLELMAREEGICKGRGGSMHVANLSIGMLGANAIVGAS 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A A++ R+ D + V FGDGA +G ++ES N+AALW L ++++ ENN +A Sbjct: 122 IPIALGSALAHQVRKKDSLAVAFFGDGAMAEGVLHESLNLAALWRLPLLFLCENNGWAE- 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S + K +F+IP ++DG D+ V AVA RA +GP ++E +T+R Sbjct: 181 FSPTHKQFVAPLDKLSAAFSIPHEKIDGNDVLRVAEAASAAVASIRAGEGPRVLECITHR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGH DP YR EEI + HDP+ + + L K ++ +++ V+ + + Sbjct: 241 WRGHYEGDPQKYRPSEEIEGL-GEHDPVARF-EAALDKKGVTKAQREQVFDEVQAQVERA 298 Query: 344 VEFAQSDKEP 353 VE A+ ++P Sbjct: 299 VERARLGRQP 308 >gi|160931363|ref|ZP_02078761.1| hypothetical protein CLOLEP_00198 [Clostridium leptum DSM 753] gi|156869610|gb|EDO62982.1| hypothetical protein CLOLEP_00198 [Clostridium leptum DSM 753] Length = 331 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 112/318 (35%), Positives = 176/318 (55%), Gaps = 3/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E++KE ++ + L R FE + L+ MG+V G HL IG+EA VG ++L D + Sbjct: 14 EYSKELLAEMWKKLNLAREFETRVQWLFSMGLVHGTTHLGIGEEATAVGSILALKPQDYV 73 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +R H +A G+D ++MAE+ ++ G+ KGKGGSMH+ S ++ GI+GA Sbjct: 74 FGTHRGHSQAIAKGIDIDRMMAEILAKETGVCKGKGGSMHIASPDINYFATSGILGASSV 133 Query: 166 LGTGIAFANKYRRS-DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + G A K R D+I V +GDGA+N+G +E+ N+AALW L +++V NN Y M T Sbjct: 134 IANGAALTIKKRNERDRITAVFYGDGASNEGACFEALNLAALWKLPILFVCINNTYGMST 193 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +++A T+ SKR F IP VDG + V + +A Y GP+++ TYR Sbjct: 194 PIAKAMHDTDLSKRAYPFGIPSKTVDGNHVLEVYDAVSEAREYV-LENGPMMVVENTYRI 252 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS SD YR++EEIN + PI+ R L + +E +L +I+++V Sbjct: 253 SGHSKSDGNLYRSKEEINAWKEKC-PIKAFRSYLAERRLFTEEELDAAVKEAAAVIDHAV 311 Query: 345 EFAQSDKEPDPAELYSDI 362 E+ ++ K P +++ D+ Sbjct: 312 EYGKASKNPSVDDVFDDV 329 >gi|258541691|ref|YP_003187124.1| pyruvate dehydrogenase E1 component subunit alpha [Acetobacter pasteurianus IFO 3283-01] gi|256632769|dbj|BAH98744.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-01] gi|256635826|dbj|BAI01795.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-03] gi|256638881|dbj|BAI04843.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-07] gi|256641935|dbj|BAI07890.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-22] gi|256644990|dbj|BAI10938.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-26] gi|256648045|dbj|BAI13986.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-32] gi|256651098|dbj|BAI17032.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654089|dbj|BAI20016.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-12] Length = 331 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 110/317 (34%), Positives = 174/317 (54%), Gaps = 1/317 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + ++E L AYR M IR FEE+ + G + GF HL G+EA VG+ +LT+ D + Sbjct: 12 QISREALLRAYRSMRTIRVFEERLHVEFATGEIPGFVHLYCGEEASAVGVCANLTDNDTI 71 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GV+ +MAE+ GR G+ +GKGGSMH+ G G +GIVG Sbjct: 72 ASTHRGHGHCIAKGVEVGGMMAEIYGRHTGVCRGKGGSMHIADLSKGMLGANGIVGGGPP 131 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A ++K + + + V FGDGA+N+G ES N+A++W+L ++V+E+N Y T Sbjct: 132 LICGAALSHKTLKDNGVAVAFFGDGASNEGTTLESMNLASVWHLPAVFVVEDNGYGEATG 191 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + A A T R F +P +G D V T A+ + R+ +GP+++ + R+ Sbjct: 192 AAYACAGTQ-KDRAAGFGLPYFSCEGDDFFDVYETARAAIDHARSGEGPVMLHVHLSRWY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR E+ E + +HD +++ R R + EGD+ EI+ V + ++V Sbjct: 251 GHFEGDAMTYRKAGEVAEQKKDHDCLKKFRARAVAENLLPEGDMDEIDAAVADEVESAVV 310 Query: 346 FAQSDKEPDPAELYSDI 362 A+ P +L +D+ Sbjct: 311 TAKQAPWPQDKDLMADV 327 >gi|206576085|ref|YP_002240259.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase, alpha subunit [Klebsiella pneumoniae 342] gi|288936971|ref|YP_003441030.1| pyruvate dehydrogenase (acetyl-transferring) [Klebsiella variicola At-22] gi|290509971|ref|ZP_06549341.1| Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Klebsiella sp. 1_1_55] gi|330005640|ref|ZP_08305318.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase, alpha subunit [Klebsiella sp. MS 92-3] gi|397641|gb|AAC13739.1| acetoin:DCPIP oxidoreductase alpha subunit [Klebsiella pneumoniae] gi|206565143|gb|ACI06919.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase, alpha subunit [Klebsiella pneumoniae 342] gi|288891680|gb|ADC59998.1| Pyruvate dehydrogenase (acetyl-transferring) [Klebsiella variicola At-22] gi|289776687|gb|EFD84685.1| Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Klebsiella sp. 1_1_55] gi|328536206|gb|EGF62587.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase, alpha subunit [Klebsiella sp. MS 92-3] Length = 319 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 111/318 (34%), Positives = 171/318 (53%), Gaps = 2/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +K+ L AYR M IR FEE+ Q G + GF HL G+EA+ VG+ +LT D + Sbjct: 2 LSKQALLQAYRKMREIRTFEERLHQENTSGDIPGFIHLYTGEEAIAVGVCENLTSADFIG 61 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D +MAE+ G+ G+ +GKGGSMH+ G G + IVG L Sbjct: 62 STHRGHGHCIAKGCDIHGMMAEIFGKDSGLCRGKGGSMHIADLSKGMLGANAIVGGAPPL 121 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A K ++ + V GDG +NQG V+E+ N+A + L +++ ENN Y GT Sbjct: 122 AIGAALTAKTLKTGNVGVSFTGDGGSNQGLVFEAINMAVVLQLPAVFIFENNGYGEGTGH 181 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A + ++R F +P + VDG D AV +AV R GP +IE +R+ G Sbjct: 182 DYAVGGRDIARRAAGFGLPAVTVDGTDFFAVYEATSEAVKRAREGGGPSVIEAKAFRWHG 241 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H DPA YR E+ +R HDP++ ++ + ++ +L I+ V ++N++V Sbjct: 242 HFEGDPALYRAEGEVQRLREQHDPLKIFTAKV--KQHITQEELAAIDEEVEALVNDAVLK 299 Query: 347 AQSDKEPDPAELYSDILI 364 A++ P P +L +D+ + Sbjct: 300 ARAAAYPAPEDLLTDVYV 317 >gi|206895304|ref|YP_002247186.1| 2-oxo acid dehydrogenase subunit E1 [Coprothermobacter proteolyticus DSM 5265] gi|206737921|gb|ACI16999.1| 2-oxo acid dehydrogenase subunit E1 [Coprothermobacter proteolyticus DSM 5265] Length = 331 Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 119/329 (36%), Positives = 184/329 (55%), Gaps = 12/329 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGM 95 E +++ LS YR M IR +EE G++Y G + G HL GQE+ VG+ Sbjct: 2 EISEQVLLSLYRTMYKIRYYEETLGKIYYEGKSPIFDISAGPIPGELHLSSGQESSAVGV 61 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 L D ++ +R H +A GVD + AE+ G++ G+S GKGG MH+F K F Sbjct: 62 CAHLKPEDAVVGTHRIHHFAIAKGVDLRAMTAEIFGKRTGLSAGKGGHMHLFDPKVNF-S 120 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 GIVGA G+ A K + +D I V G+GAANQG +ES N+AALW L VI+VI Sbjct: 121 CSGIVGASFPQAVGVGIAAKQQGADYIAVAVGGEGAANQGTFHESLNLAALWKLPVIFVI 180 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 E+N +A+ ++++ + S+R ++ IPG+ VDG D+ AV +AV R +GP Sbjct: 181 EDNSWAISVPKDKSTSLSRNSERAKAYGIPGVYVDGKDVVAVYEVAKEAVDRARNGEGPS 240 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +IE+ YR RGH D YR++E++ E N+DP++ + K+LL SE +L+ ++ Sbjct: 241 LIEIKVYRLRGHFEGDAQIYRSKEDL-EKAMNNDPVKYLEKQLLDRNLVSEEELQNLQKA 299 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDILI 364 + I+ +E+A+ + P+ E ++ I Sbjct: 300 IMAEIDEIIEYARQSEYPEEHEALENVFI 328 >gi|238893249|ref|YP_002917983.1| acetoin:DCPIP oxidoreductase alpha subunit [Klebsiella pneumoniae NTUH-K2044] gi|238545565|dbj|BAH61916.1| acetoin:DCPIP oxidoreductase alpha subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 319 Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 111/318 (34%), Positives = 171/318 (53%), Gaps = 2/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +K+ L AYR M IR FEE+ Q G + GF HL G+EA+ VG+ +LT D + Sbjct: 2 LSKQALLQAYRKMREIRTFEERLHQENTSGDIPGFIHLYTGEEAIAVGVCENLTSADFIG 61 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D +MAE+ G+ G+ +GKGGSMH+ G G + IVG L Sbjct: 62 STHRGHGHCIAKGCDIHGMMAEIFGKDSGLCRGKGGSMHIADLSKGMLGANAIVGGAPPL 121 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A K ++ + V GDG +NQG V+E+ N+A + L +++ ENN Y GT Sbjct: 122 AIGAALTAKTLKTGNVGVSFTGDGGSNQGLVFEAINMAVVLQLPAVFIFENNGYGEGTGH 181 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A + ++R F +P + VDG D AV +AV R GP +IE +R+ G Sbjct: 182 DYAVGGRDIARRAAGFGLPAVTVDGTDFFAVYEATSEAVKRAREGGGPSVIEAKAFRWHG 241 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H DPA YR E+ +R HDP++ ++ + ++ +L I+ V ++N++V Sbjct: 242 HFEGDPALYRAEGEVQRLREQHDPLKIFTAKV--KQHITKEELAAIDEEVEALVNDAVLK 299 Query: 347 AQSDKEPDPAELYSDILI 364 A++ P P +L +D+ + Sbjct: 300 ARAAAYPAPEDLLTDVYV 317 >gi|90416416|ref|ZP_01224347.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit(Acetoin:DCPIP oxidoreductase-alpha) (AO:DCPIP OR) [marine gamma proteobacterium HTCC2207] gi|90331615|gb|EAS46843.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit(Acetoin:DCPIP oxidoreductase-alpha) (AO:DCPIP OR) [marine gamma proteobacterium HTCC2207] Length = 323 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 115/317 (36%), Positives = 169/317 (53%), Gaps = 1/317 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++ E LSAYR M IR FEE+ + + G V GF H+ GQEA+ V + L++ D + Sbjct: 3 YSTEFLLSAYRTMKTIREFEERCVKEFEGGNVPGFTHVSNGQEAIAVAACIDLSDKDIIG 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D +M E+ GR G+ KGKGGSMH+ G G + IVG L Sbjct: 63 STHRGHGHCIAKGCDVGGMMKEIMGRSTGLCKGKGGSMHIADIDKGMLGANAIVGGGPPL 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A A K + + + GDG+ANQG V+E+ N+A + L ++V ENN YA GT+ Sbjct: 123 VNGAALAAKTLGTKNVALSFNGDGSANQGTVFEAMNMAVVLKLPHVFVYENNGYAEGTAA 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + A + ++R F +P +DG+D A + A R GP IE + R+ G Sbjct: 183 NYAVGSNSLTERNAGFGMPAECIDGLDFFATYEALKIATERARNGDGPTAIEAMCVRFDG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H + DP YR ++E+ R N D I+ R+R++ W + I+ V I +V Sbjct: 243 HFIGDPQLYRPKDEVKNARKNQDCIKIFRERVIAEGWLKAAAMNAIDKEVMVEIETAVVN 302 Query: 347 AQSDKEPDPA-ELYSDI 362 A + PDPA +L SD+ Sbjct: 303 ALAAPHPDPATDLMSDV 319 >gi|255602920|ref|XP_002537951.1| pyruvate dehydrogenase, putative [Ricinus communis] gi|223514452|gb|EEF24431.1| pyruvate dehydrogenase, putative [Ricinus communis] Length = 143 Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 92/143 (64%), Positives = 119/143 (83%) Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTS SRA+AQ+N+S RG F IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EMLT Sbjct: 1 MGTSTSRATAQSNYSLRGSGFGIPGVQVDGMDVRAVKAAADEALEHCRSGKGPIILEMLT 60 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSDPA YR+++E+ +MRS HDPIEQV+ RL+ WASE +LK I+ +VR I+ Sbjct: 61 YRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVKARLMEQGWASEDELKAIDKDVRDIVA 120 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 +S +FAQ+D EPD +ELY+DIL+ Sbjct: 121 DSADFAQNDPEPDVSELYTDILL 143 >gi|115960026|ref|XP_001184151.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 378 Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 116/231 (50%), Positives = 142/231 (61%), Gaps = 10/231 (4%) Query: 23 AKRAATSSVDCVDIPF-LEGFE-----VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 A R + V PF L E S K++ L Y M IRR E A LY Sbjct: 151 ASRQVNTDVQLTTNPFKLHKLEEGPKKTSVLTKDEALDYYHKMQTIRRMETAAATLYKSK 210 Query: 77 MVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGI 136 V GFCHL GQEA VG+ LT D +ITAYR HG GV ++AELTGR+ G Sbjct: 211 EVRGFCHLYSGQEACAVGISSVLTPDDAVITAYRAHGWAYLRGVTLHGVLAELTGRRTGC 270 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 +KGKGGSMHM+ KN FYGG+GIVGAQV LG GIA A KY +C+ +GDGAANQGQ Sbjct: 271 AKGKGGSMHMYC-KN-FYGGNGIVGAQVPLGAGIALALKYTDKKNVCISLYGDGAANQGQ 328 Query: 197 VYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 V+E++NIA LW+L I+V ENN+Y MGT+V R++A T++ RG IPG+ Sbjct: 329 VFEAYNIAKLWDLPCIFVCENNKYGMGTAVERSAASTDYYTRGDY--IPGI 377 >gi|296531981|ref|ZP_06894765.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Roseomonas cervicalis ATCC 49957] gi|296267696|gb|EFH13537.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Roseomonas cervicalis ATCC 49957] Length = 351 Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 119/308 (38%), Positives = 173/308 (56%), Gaps = 1/308 (0%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 A R MLL+RRFEE A + Y G++ G HL IGQEA +G+ +L E D + + +R HGH Sbjct: 34 ALRRMLLVRRFEEGAEEAYMRGLIHGTMHLSIGQEASAIGICSALEERDYITSTHRGHGH 93 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + G + ++ AE G++ G +G+GGSMH+ G G +GIVG + + G A + Sbjct: 94 CIGKGAEVKRMFAEFFGKETGYCRGRGGSMHIADPARGNLGANGIVGGGIPIAVGAALSA 153 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K R + + V FGDGA N+G +E+ N+AA+W L V++V ENN Y M TS++RA+A N Sbjct: 154 KRRGTGAVAVSFFGDGANNEGAFHEALNMAAIWRLPVVFVCENNGYGMSTSMARATAVPN 213 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + R ++ +PG+ VDG V AV R +GP +IE TYR RGHS SD Sbjct: 214 VADRAAAYGMPGVIVDGNRFADVAEAAFAAVERARRGEGPTLIESKTYRIRGHSRSDRNR 273 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EEI E DPI+ + L ++ + V I ++++A+ PD Sbjct: 274 YRTKEEI-ESWQRRDPIKLFEEELTGLGILRMEEIVALRAEVEAEIAAAIDYAKDSPAPD 332 Query: 355 PAELYSDI 362 A L D+ Sbjct: 333 VAALTRDV 340 >gi|159043087|ref|YP_001531881.1| pyruvate dehydrogenase E1 component subunit alpha [Dinoroseobacter shibae DFL 12] gi|157910847|gb|ABV92280.1| pyruvate dehydrogenase E1 component subunit alpha [Dinoroseobacter shibae DFL 12] Length = 339 Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 111/308 (36%), Positives = 168/308 (54%), Gaps = 3/308 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGM-VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y M +R FEE+ G+L+ G G HL IG+E+ VG+ + +GD T +R HG Sbjct: 10 YEDMRRVRTFEERVGELFVRGKSAGSMLHLSIGEESAAVGVCAHMRDGDTFTTHHRGHGI 69 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 LA G D ++MAE+ G++ G GKGGSMH+ G G + IVG + G + Sbjct: 70 FLARGADPDRMMAEIAGKESGYCHGKGGSMHIADMGLGHLGANAIVGGGIPSVVGAGLSA 129 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 ++++S I V FGDGA QG +YES N+AALW L VI+V NNQY MGT + +A+A N Sbjct: 130 RHKKSGAISVAFFGDGATGQGILYESMNMAALWKLPVIFVCINNQYGMGTRIDQATANPN 189 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 +R +F + VDG+D+ V +A R + P + + YR+ GH+ D + Sbjct: 190 LHERAAAFGLAARTVDGLDVEDVADAAADLIAGAREGR-PAFLSIDCYRFFGHARKDKSP 248 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR E E R DP+ + R +L+ + SE +L ++ V ++ S++FA + EP Sbjct: 249 YRDEAEEAEGRKK-DPVLRARDKLISDGLMSEAELDALDTRVASEMDGSIDFAVAGNEPQ 307 Query: 355 PAELYSDI 362 ++ D+ Sbjct: 308 MQSMFRDV 315 >gi|298241075|ref|ZP_06964882.1| Pyruvate dehydrogenase (acetyl-transferring) [Ktedonobacter racemifer DSM 44963] gi|297554129|gb|EFH87993.1| Pyruvate dehydrogenase (acetyl-transferring) [Ktedonobacter racemifer DSM 44963] Length = 337 Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 119/324 (36%), Positives = 173/324 (53%), Gaps = 5/324 (1%) Query: 43 EVSEFNKEQE--LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 E ++ ++EQ L+ Y ML IR FEE +LY + G HL G+EA+ VG+ +L Sbjct: 13 EYTQGDEEQARWLAMYEQMLKIRVFEEHVNELYRTARMPGLAHLYSGEEAIAVGVCQALR 72 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D + + +R HGH LA G ++ AEL G++ G +GKGGSMH+ G G + IV Sbjct: 73 RDDYITSTHRGHGHCLAKGARVDRMFAELLGKEAGYCRGKGGSMHIADQDTGNLGANAIV 132 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 G + TG A ++K R SD++ V FGDGA QG +YE N+A+LW L VIYV ENNQY Sbjct: 133 GGSAGIATGAAMSSKMRESDRVAVCFFGDGALGQGLLYEVMNMASLWKLPVIYVCENNQY 192 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 T + +A ++R +F + ++DG D+R V A + V R +GP + Sbjct: 193 NEYTHNAETTA-GEMAQRARAFGLLTEEIDGQDVRVVYAAAHRVVERARQGEGPAFLLCD 251 Query: 281 TYRYRGHSMSD--PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYRY GH + D + YR +EE + DP++ + + L + L +IE VR Sbjct: 252 TYRYFGHHVGDIQRSYYRAKEEEEHWIQHRDPLKLLAEWLSTEGFVGHETLTQIEQRVRA 311 Query: 339 IINNSVEFAQSDKEPDPAELYSDI 362 + FA S P P E+ D+ Sbjct: 312 EVAEGERFALSAPFPQPGEVEQDV 335 >gi|160942020|ref|ZP_02089335.1| hypothetical protein CLOBOL_06906 [Clostridium bolteae ATCC BAA-613] gi|158434911|gb|EDP12678.1| hypothetical protein CLOBOL_06906 [Clostridium bolteae ATCC BAA-613] Length = 327 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 108/307 (35%), Positives = 166/307 (54%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE+ L YR M++IRRFEE + G + GF HL IGQEA G+ +L + D Sbjct: 3 LSKERLLKVYRDMVMIRRFEEVIEEYAANGTIPGFVHLSIGQEACQAGVVDALKKTDYKF 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +R HG I CG D +MAE+ ++ GI+ G+GGSMH+ + G +GI G+ + Sbjct: 63 PDHRGHGAIALCGTDPKLVMAEIFAKETGINHGRGGSMHVNDLECRNMGFNGIQGSTMVT 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G AFA+ Y +D + V GDG +G +ES N+AA W L +IY + NN YA+ T Sbjct: 123 CLGTAFASVYNGTDDVTAVFLGDGTLGEGTCHESMNMAATWKLPIIYCLVNNGYAISTRY 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A Q G + +P ++DG DI AV ++KA R +GP ++E +TYR++G Sbjct: 183 EEAHPQKELKTWGEGYEVPSFRLDGNDIEAVIEAVEKAADRARKGEGPTVLEFMTYRWQG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H DPA YR +E++ ++ DP++ + LL + L+ +E K + ++F Sbjct: 243 HFAGDPAAYRPEDEVSYWVNDRDPLKLTKAILLEREQVEPAVLQAVEEEEEKHVQEMLKF 302 Query: 347 AQSDKEP 353 + + P Sbjct: 303 SLESEYP 309 >gi|119503927|ref|ZP_01626009.1| probable dehydrogenase E1 component [marine gamma proteobacterium HTCC2080] gi|119460435|gb|EAW41528.1| probable dehydrogenase E1 component [marine gamma proteobacterium HTCC2080] Length = 326 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 115/310 (37%), Positives = 164/310 (52%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 AYRLM IR FEE+ G + GF HL GQEA VG+ L D +I+ +R HGH Sbjct: 11 AYRLMKTIREFEERVNAEIMNGQIPGFTHLYTGQEANAVGVCAHLDTDDTIISTHRGHGH 70 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +A G D S +M EL G G+ KGKGGSMH+ G G +GIV + G A A Sbjct: 71 CIAKGADVSGMMKELFGSSEGLCKGKGGSMHVADIDKGILGANGIVAGGPPISVGSALAA 130 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K R++ K+ V GDG+ NQG +E+ N+A + + ++VIENN Y+ T++S A + Sbjct: 131 KIRKNGKVAVSFSGDGSVNQGTCFEAMNMAVVLKVPAVFVIENNYYSEHTNISYAVGCDD 190 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 R +F P DG D AV KA+A+ RA GP + RY GH + DP + Sbjct: 191 LKARTEAFGFPVFVADGADFFAVHEAAGKAIAHARAGNGPAGVFAEQGRYHGHFVGDPQH 250 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR E++++R N ++ R R+L + SE L I+ V +I + A++ P Sbjct: 251 YRGEGELDDLRENRCCLKNFRARMLESGEVSEDVLDGIDAEVMALIEQATIDAKAAARPT 310 Query: 355 PAELYSDILI 364 P ++ D+ I Sbjct: 311 PDQVTEDVYI 320 >gi|50084219|ref|YP_045729.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Acinetobacter sp. ADP1] gi|49530195|emb|CAG67907.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit (Acetoin:DCPIP oxidoreductase-alpha) (AO:DCPIP OR) [Acinetobacter sp. ADP1] Length = 320 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 111/319 (34%), Positives = 179/319 (56%), Gaps = 2/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +EQ L+AY+ M IR FE++ + G + GF HL G+EAV VG+ +LT+ D + Sbjct: 2 QLTEEQLLAAYKRMRDIREFEDRLHEENNTGDIPGFIHLYSGEEAVAVGVCENLTDQDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D +M E+ G+ G+ +GKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHCIAKGCDIHDMMLEIFGKDAGLCRGKGGSMHIADLDKGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A K ++ I + GDG +NQG +E+ N+A + L VI+V ENN + GT+ Sbjct: 122 LAIGAALTAKTLKTGGIGLSFTGDGGSNQGLTFEAINMAVVLKLPVIFVFENNGFGEGTA 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 A + + R F +P +VDG D AV A KA+ R +GP +IE +T R+ Sbjct: 182 HDYAVGSKDIAGRAAGFGLPAEKVDGTDFFAVYAAAQKAIQRARRGEGPSVIETVTNRFY 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP R+++EI+ ++ + DPI+ R+++ E L I+ + ++++V Sbjct: 242 GHFEGDPGLIRSKDEIDYVKEHKDPIKIFREKV--KGQIDEAKLDAIDAVSKANVDDAVA 299 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ K P+ ++L +D+ + Sbjct: 300 KARAAKYPEVSQLLTDVYV 318 >gi|317126239|ref|YP_004100351.1| pyruvate dehydrogenase (acetyl-transferring) [Intrasporangium calvum DSM 43043] gi|315590327|gb|ADU49624.1| Pyruvate dehydrogenase (acetyl-transferring) [Intrasporangium calvum DSM 43043] Length = 332 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 117/311 (37%), Positives = 176/311 (56%), Gaps = 3/311 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 +S YR M+ IR FE+KA L+ G + GF HL +GQEAV G+ L D + T +R H Sbjct: 18 VSLYRTMVTIRMFEQKAAALFAGGRLPGFLHLSLGQEAVAAGVCSVLDGRDLITTTHRGH 77 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH +A G + +MAEL GR G KG+ GSMH+ T G G + IVG + + G AF Sbjct: 78 GHCIAKGGEVEGMMAELFGRAEGYCKGRSGSMHIMDTNVGILGANAIVGGGIPMAAGAAF 137 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 + + + ++ V FG+GA +G +E N++ALW L +++V+ENN YA T VS+ + Sbjct: 138 SARAQNDGRVAVSFFGEGAVAEGVFHEVLNLSALWALPIVFVVENNGYAELTHVSKHLSA 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 N + + IP VDG D+ AV+ ++AV R +GP ++E TYR+ GH DP Sbjct: 198 ENVADFAAPYGIPAEIVDGNDVLAVQGATERAVNRARRGEGPTLLECKTYRWHGHFEGDP 257 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR+ +E +E + DPI Q R R+ + S +L+EI+ ++ + + E+A+ Sbjct: 258 QKYRSVQERDEWKLR-DPILQFRARVTESGVISVAELEEIDDRIKDSVERAAEWAEG-LP 315 Query: 353 PDPAE-LYSDI 362 P P E L D+ Sbjct: 316 PAPIESLVQDV 326 >gi|258651330|ref|YP_003200486.1| pyruvate dehydrogenase [Nakamurella multipartita DSM 44233] gi|258554555|gb|ACV77497.1| Pyruvate dehydrogenase (acetyl-transferring) [Nakamurella multipartita DSM 44233] Length = 335 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 115/319 (36%), Positives = 173/319 (54%), Gaps = 1/319 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 E+ L AYR M IR FE++ + G + GF HL G+EA G+ L E D + Sbjct: 15 LTPERLLRAYRTMKSIRMFEDRVHDEFATGDIPGFVHLYAGEEASAAGICAHLDEDRDTI 74 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GVD +MAE+ GR G +GKGGSMH+ G G +GIVG Sbjct: 75 ASTHRGHGHCIAKGVDIKPMMAEIFGRTTGSCRGKGGSMHIADLSKGMLGANGIVGGGPP 134 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A A+K + + + FGDGA+NQG E+ N+A++WNL I+V ENN YA T+ Sbjct: 135 LICGTALASKIKGDGGVGIAFFGDGASNQGTTAEAMNLASVWNLPAIFVAENNGYAEATA 194 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + N + R + +PG+ VDG D AV +A+ R GP +IE+ RY Sbjct: 195 AKWSVSADNIADRAAGYGMPGVIVDGFDFFAVYEVAGEAIRRAREGGGPTLIEVKLTRYY 254 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR ++EI R + D +++ R R+ ++ L +++ V ++I+ SV Sbjct: 255 GHFEGDQQTYRPKDEIGHARESLDCLKRFRARVTETGRLTDAQLDQVDAQVAQLIDESVA 314 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ P A+L +D+ + Sbjct: 315 EAKAAAVPGAADLLTDVYV 333 >gi|330994200|ref|ZP_08318128.1| Acetoin:2-6-dichlorophenolindophenol oxidoreductase subunit alpha [Gluconacetobacter sp. SXCC-1] gi|329758667|gb|EGG75183.1| Acetoin:2-6-dichlorophenolindophenol oxidoreductase subunit alpha [Gluconacetobacter sp. SXCC-1] Length = 321 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 111/319 (34%), Positives = 171/319 (53%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +E L +YR M IR FEE+ + G + GF HL G+EA VG+ +LT+ D + Sbjct: 2 QIARETLLRSYRAMRTIRMFEERLHVEFATGEIPGFVHLYCGEEASAVGVCANLTDNDTI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GV + +MAE+ GR G+ +GKGGSMH+ G G +GIVG Sbjct: 62 ASTHRGHGHCIAKGVGVAGMMAEIYGRSTGVCRGKGGSMHIADLSCGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A ++K + V +GDGA+N+G ES N+A++W L ++V+E+N Y T+ Sbjct: 122 LICGAALSHKTLGDGAVAVAFYGDGASNEGTTLESLNLASVWQLPAVFVVEDNGYGEATA 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S A A T R +F +P ++ DG D AV +A+A+ R GP ++ + R+ Sbjct: 182 ASYACAGTQ-RARAAAFGMPYIECDGSDYFAVHQAAGEAIAHARGGNGPAMLHVHLTRWY 240 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR E+ E R +HD + R+R+ L E++ V I ++V Sbjct: 241 GHFEGDAMTYRAPNEVAEARRDHDCLRLFRERVTQAGLFEGSALDEVDAAVADEIESAVL 300 Query: 346 FAQSDKEPDPAELYSDILI 364 A+ D P +L +D+ + Sbjct: 301 RAKDDPLPQAPDLMADVYV 319 >gi|303390721|ref|XP_003073591.1| pyruvate dehydrogenase E1 component subunit alpha [Encephalitozoon intestinalis ATCC 50506] gi|303302738|gb|ADM12231.1| pyruvate dehydrogenase E1 component subunit alpha [Encephalitozoon intestinalis ATCC 50506] Length = 351 Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 132/333 (39%), Positives = 199/333 (59%), Gaps = 24/333 (7%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + E+ + Y+ M+ IR ++ Y + GFCHL IGQE + ++ + + D Sbjct: 31 VHKLKIEEMIYIYKQMMKIRFVDKLMDIEYKKENIRGFCHLSIGQEGIYTALEY-MMDDD 89 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++++YR HG G +IM E+ GRQGG+SKGKGGSMH++++ F+GGHGIVGAQ Sbjct: 90 IVVSSYRCHGIAYVSGCRTREIMQEVLGRQGGVSKGKGGSMHLYNSH--FFGGHGIVGAQ 147 Query: 164 VSLGTGIAFANKYR--------RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + LG GIA+A KY+ + K+ V +GDGAANQGQ +ESFN+A +W L +++V Sbjct: 148 IPLGVGIAYAIKYKERVLGSKSQKGKVSYVFYGDGAANQGQAWESFNMAMVWKLPIVFVC 207 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---K 272 ENN+Y M T SA TNF RG IPG++V +I + + + Y R H K Sbjct: 208 ENNRYGMWTPAESVSADTNFYLRG--GRIPGIRVPHNNIFGLISVL----GYARKHSAEK 261 Query: 273 GPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 GPII+++ TYR HS D YR++EE++ R N D +E +RKRLL ++ SE +L E Sbjct: 262 GPIIVQIDTYRLCTHSTVDSKETYRSKEEVDRERKN-DCMEDIRKRLL--EFRSEEELGE 318 Query: 332 IEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 +E V + + ++ A+ K + +EL+ D+ + Sbjct: 319 LERCVLEEVEKDMDAAKKSKPTEESELFKDVFL 351 >gi|169334018|ref|ZP_02861211.1| hypothetical protein ANASTE_00411 [Anaerofustis stercorihominis DSM 17244] gi|169258735|gb|EDS72701.1| hypothetical protein ANASTE_00411 [Anaerofustis stercorihominis DSM 17244] Length = 328 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 114/311 (36%), Positives = 167/311 (53%), Gaps = 2/311 (0%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 + FE + +K+ L R ML R FE K +++ G++ G HL +G+EA G+ + Sbjct: 1 MNSFEEKKKDKDFMLKVLRTMLTSRHFELKVNEMFMAGLIHGTTHLGVGEEACHAGISLG 60 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L D ++ +R HGH LA G + EL G KG GGSMH ++ G Sbjct: 61 LNPDDWIVPTHRGHGHCLAKGATPYNMFCELFANYQGGCKGLGGSMHYIDLEHCNLGSSA 120 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIEN 217 IVGA V G A+A K R K CV F GDGA++QG V E N+A++W V+ EN Sbjct: 121 IVGAGVPTAVGAAYAMK-REGKKNCVATFFGDGASSQGMVLEGMNLASVWEAPVLLCCEN 179 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N+Y M T + + + RG +F+I VDGMD+ AV + +A YCR P ++ Sbjct: 180 NRYGMSTPAKYTVSIEDIADRGPAFSIKSKIVDGMDVLAVLEAVMEAGEYCRTEGKPYLL 239 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E TYRY GHS SD YRT+EE +M+ NHD I++ + L+ +E + E++ + Sbjct: 240 EFKTYRYLGHSKSDQRKYRTKEEEEDMKKNHDAIDKFKNDLIAMNMITEEEFDELDKKIE 299 Query: 338 KIINNSVEFAQ 348 K I+++ E A+ Sbjct: 300 KEIDDAAEKAK 310 >gi|301064752|ref|ZP_07205132.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [delta proteobacterium NaphS2] gi|300441127|gb|EFK05512.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [delta proteobacterium NaphS2] Length = 325 Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 111/320 (34%), Positives = 175/320 (54%), Gaps = 2/320 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGM-GMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + KE+++ R MLL R+FE+K +L + G + G LC GQEAV G+ +L D Sbjct: 2 QITKEKKIEMLRSMLLSRQFEDKLTELCKIEGKIPGMMILCTGQEAVGSGVCAALAPEDI 61 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +I+ +R H H+LA G D + +MAE+ G++ G +KGK G++H+ + +VG Sbjct: 62 IISNHRSHNHLLARGADPNALMAEIYGKRTGCNKGKSGTLHLAVPEVNALCTTTVVGGGP 121 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + G AFA +YR+ + + V FGDGAA++G +E+ N+A+LW L VI+V ENN YA Sbjct: 122 PIAVGTAFAQQYRKEESVTVCFFGDGAADEGSFHEALNLASLWRLPVIFVCENNLYAGAQ 181 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + + R +++ +PG VDG D+ AV KA + KGP +IE TYR Sbjct: 182 RYEEHTKVKDIADRAIAYAMPGEVVDGNDVTAVYRAACKAREIAVSEKGPTLIECKTYRC 241 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH +D Y+ ++EI PI+++R L S +E+ + +I+ N+V Sbjct: 242 HGHGEADLQLYQPKDEIAAWVEKC-PIDKLRDEALSEGLISNDAYEEMNRKMNEIVENAV 300 Query: 345 EFAQSDKEPDPAELYSDILI 364 FA+ P P E D+ + Sbjct: 301 RFAEESPFPSPEEALEDVFV 320 >gi|56964550|ref|YP_176281.1| acetoin dehydrogenase E1 component alpha subunit [Bacillus clausii KSM-K16] gi|56910793|dbj|BAD65320.1| acetoin dehydrogenase E1 component alpha subunit [Bacillus clausii KSM-K16] Length = 315 Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 121/315 (38%), Positives = 180/315 (57%), Gaps = 3/315 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K++ L Y+ M IR FEE+ + +G G++ GF HL G+EAV G+ + L E D + + Sbjct: 3 KKEALWIYQKMNEIRLFEEEVHRKFGEGIIPGFVHLYAGEEAVATGVSVLLDEEDYITST 62 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R HGH +A G D +++MAE+ G++ G+ GKGGSMH+ + G G +GIVG L Sbjct: 63 HRGHGHAIAKGCDINRMMAEIMGKKDGLGGGKGGSMHVADVEKGMLGANGIVGGGFGLAA 122 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G A K R + + V FGDGA+N+G +E N+A++ L VI+V ENNQ+ GT Sbjct: 123 GAALTIKTLRQNHVAVCFFGDGASNEGLFHEGLNLASILKLPVIFVCENNQFGEGTPFRY 182 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASA ++R ++N+PG++VDGM + V + +A+ +A +GP +IE TYR+ GH Sbjct: 183 ASASETVAERAAAYNMPGVRVDGMKVEDVYSATKEAIRRAKAGEGPTLIECDTYRHYGHF 242 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 D Y++ + N R DPI + RK + W + EIE + I + EFAQ Sbjct: 243 EGDEQKYKSEADQNRDR---DPIPEFRKVAVEKGWMTNKQADEIEKEAAETIKKASEFAQ 299 Query: 349 SDKEPDPAELYSDIL 363 PD LY+DI Sbjct: 300 KSPLPDVESLYTDIF 314 >gi|332853853|ref|ZP_08435012.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase, alpha subunit [Acinetobacter baumannii 6013150] gi|332865963|ref|ZP_08436731.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase, alpha subunit [Acinetobacter baumannii 6013113] gi|332728334|gb|EGJ59713.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase, alpha subunit [Acinetobacter baumannii 6013150] gi|332734893|gb|EGJ65980.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase, alpha subunit [Acinetobacter baumannii 6013113] Length = 320 Score = 205 bits (522), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 109/319 (34%), Positives = 175/319 (54%), Gaps = 2/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +EQ L+AY+ M IR FE++ + G + GF HL G+EAV VG+ +LT+ D + Sbjct: 2 QLTEEQLLAAYKRMRDIREFEDRLHEENTNGDIPGFIHLYSGEEAVAVGICENLTDKDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D +M E+ G+ G+ +GKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHCIAKGCDIHAMMLEIFGKDDGLCRGKGGSMHIADLDKGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A K ++ + + GDG +NQG +E+ N+A + L VI+V ENN + GT Sbjct: 122 LAIGAALTAKTLKTGGVGLSFTGDGGSNQGLTFEAMNMAVVLKLPVIFVFENNGFGEGTG 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 A + + R F +P ++VDG D AV A+ R +GP +IE +T R+ Sbjct: 182 HDYAVGSKDIAGRAAGFGLPAVKVDGTDFFAVYEAAQTAIERARRGEGPSVIETITNRFY 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP R++EE+ ++ N DP++ R+++ E L EI+ + ++++V Sbjct: 242 GHFEGDPGLIRSKEEVEFIKENKDPLKIFREKV--KGKIDEAKLDEIDAASKANVDDAVA 299 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ P P +L +D+ + Sbjct: 300 KARAAVYPKPEQLLTDVYV 318 >gi|188535873|ref|YP_001905933.1| Acetoin dehydrogenase complex, alpha subunit [Erwinia tasmaniensis Et1/99] gi|188027177|emb|CAO95003.1| Acetoin dehydrogenase complex, alpha subunit [Erwinia tasmaniensis Et1/99] Length = 338 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 113/312 (36%), Positives = 171/312 (54%), Gaps = 1/312 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L AY+ M IR FE++ Q Y G + GF HL GQEA VG+ L++ DQ+ + +R H Sbjct: 26 LRAYKSMKTIRVFEDRLHQDYATGTIPGFAHLYAGQEATAVGIMSHLSDSDQIASTHRGH 85 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH +A GVD +M E+ G+ GG+ GKGGSMH+ G G +GI+GA L G A Sbjct: 86 GHCIAKGVDVIAMMKEIYGKAGGVCNGKGGSMHIADLSKGMMGANGILGAGAPLVCGAAL 145 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R + + GDG NQG V ES N+A +WNL +++V+ENN YA T R+++ Sbjct: 146 AAKIRAQGDVAICFGGDGGVNQGAVLESMNLATVWNLPLMFVVENNDYAQSTPQKRSTSV 205 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T++ R F +P + VDG+D +V + + R GP+++E R+ GH D Sbjct: 206 TSYEDRAKGFGMPSVTVDGLDFFSVYLVAGELIERMRNGGGPVLLECKNVRFYGHFEGDQ 265 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR E+++ R + D ++ + + S L EI+ V +I+ +V A++ E Sbjct: 266 QAYRPAGEVDQARRDRDCLKIFIDK-AQQQGISLAALTEIDQQVAALIDEAVNAAKAAPE 324 Query: 353 PDPAELYSDILI 364 P+ LY D+ + Sbjct: 325 PEADALYRDVYV 336 >gi|118589420|ref|ZP_01546826.1| Acetoin dehydrogenase E1 component alpha-subunit [Stappia aggregata IAM 12614] gi|118438120|gb|EAV44755.1| Acetoin dehydrogenase E1 component alpha-subunit [Stappia aggregata IAM 12614] Length = 331 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 118/313 (37%), Positives = 166/313 (53%), Gaps = 3/313 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N E+ L Y M+ IR FE+ A QLY + G H+ GQEAV VG+ +LT D++ + Sbjct: 10 NTEEYLRMYTQMVRIRAFEDNANQLYLSAKMPGLTHMYSGQEAVAVGICEALTPEDKITS 69 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A G ++ EL G++ G +GKGGSMH+ NG G + IVG + + Sbjct: 70 THRGHGHCVAKGAHFKEMFCELLGKEEGYCRGKGGSMHIADQANGNLGANAIVGGSMGIA 129 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG A K + + V FGDGA QG YE N+AALW L VIY ENN Y+ T Sbjct: 130 TGSALTAKRLGTGHVTVCFFGDGATAQGLWYEVMNMAALWKLPVIYACENNGYSEYTRTE 189 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +A + + R +F I +VDG D+ AV + A CR +GP +E+ TYRY GH Sbjct: 190 EIAAGS-LTARAEAFGIESFKVDGQDVLAVNKLAGELAARCRKGEGPFFLELDTYRYHGH 248 Query: 288 SMSDPAN--YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + D YR ++E E +S DPI K L+ K + +L I+ + +V+ Sbjct: 249 HVGDINRDYYRAKDEETEWKSARDPITNFGKWLIDQKIMTADELVAIDNEIAADAEAAVK 308 Query: 346 FAQSDKEPDPAEL 358 +A K PD E+ Sbjct: 309 YALDAKYPDVREV 321 >gi|84687136|ref|ZP_01015018.1| probable dehydrogenase E1 component [Maritimibacter alkaliphilus HTCC2654] gi|84664907|gb|EAQ11389.1| probable dehydrogenase E1 component [Rhodobacterales bacterium HTCC2654] Length = 321 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 117/317 (36%), Positives = 169/317 (53%), Gaps = 1/317 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + +Q AYR M LIR FEE+ G + GF HL GQEA+ VG+ +L + D +I+ Sbjct: 4 SPDQIRQAYRQMRLIREFEERLHVENPKGEIAGFTHLYSGQEAIAVGVCENLRDNDYIIS 63 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH LA G D +M E+ GR G+ KG+GGSMH+ G G +GIVG + Sbjct: 64 THRGHGHCLARGCDPKGMMHEIYGRADGLCKGRGGSMHIADLDKGMLGANGIVGGGQPIA 123 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A A K R + V GDGA+NQG V+E+ N+A + L ++V+ENN Y+ T S Sbjct: 124 VGAAVACKARGDGSVSVSFTGDGASNQGTVFEAMNMAVVLKLPKVFVLENNGYSEHTGAS 183 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + R F IP + DG D +V +KA+ + RA GP I RY GH Sbjct: 184 YGIG-GDLKTRTEGFGIPVWEADGFDYFSVYEAAEKAIEHARASNGPSAILATATRYFGH 242 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 DP NYR ++E+ R D ++Q+R+++ + +L I+ V +I+ SVE A Sbjct: 243 FEGDPQNYRAKDEVKNFRETVDALKQMREKVTGAGIFTAEELDAIDDEVLALIDASVESA 302 Query: 348 QSDKEPDPAELYSDILI 364 ++ P + SD+ I Sbjct: 303 RTGPTPGADTMMSDVYI 319 >gi|115733259|ref|XP_790922.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 214 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 109/205 (53%), Positives = 135/205 (65%), Gaps = 4/205 (1%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + S K++ L Y M IRR E A LY V GFCHL GQEA VG+ LT Sbjct: 13 KTSVLTKDEALDYYHKMQTIRRMETAAATLYKSKEVRGFCHLYSGQEACAVGISSVLTPD 72 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D +ITAYR HG GV ++AELTGR+ G +KGKGGSMHM+ KN FYGG+GIVGA Sbjct: 73 DAVITAYRAHGWAYLRGVTLHGVLAELTGRRTGCAKGKGGSMHMYC-KN-FYGGNGIVGA 130 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV LG GIA A KY +C+ +GDGAANQGQV+E++NIA LW+L I+V ENN+Y M Sbjct: 131 QVPLGAGIALALKYTDKKNVCISLYGDGAANQGQVFEAYNIAKLWDLPCIFVCENNKYGM 190 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGM 247 GT+V R++A T++ RG IPG+ Sbjct: 191 GTAVERSAASTDYYTRGDY--IPGI 213 >gi|162147506|ref|YP_001601967.1| pyruvate dehydrogenase E1 component subunit alpha [Gluconacetobacter diazotrophicus PAl 5] gi|209545613|ref|YP_002277842.1| Pyruvate dehydrogenase (acetyl-transferring) [Gluconacetobacter diazotrophicus PAl 5] gi|161786083|emb|CAP55665.1| putative pyruvate dehydrogenase E1 component subunit alpha [Gluconacetobacter diazotrophicus PAl 5] gi|209533290|gb|ACI53227.1| Pyruvate dehydrogenase (acetyl-transferring) [Gluconacetobacter diazotrophicus PAl 5] Length = 321 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 115/319 (36%), Positives = 178/319 (55%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +E L +YR M IR FEE+ + G + GF HL G+EA VG+ +LT+ D + Sbjct: 2 QIARETLLRSYRAMRTIRDFEERLHVEFATGEIPGFVHLYCGEEASGVGVCANLTDTDTI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GV+ + +MAE+ GR+ G+ +GKGGSMH+ G G +GIVG Sbjct: 62 SSTHRGHGHCIAKGVEVAGMMAEIYGRRTGVCRGKGGSMHIADLSRGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A A+K + + V +GDGA+N+G ES N+A++W L V++V+E+N Y T+ Sbjct: 122 LMCGAALAHKTLKDGGVAVAFYGDGASNEGSTLESLNLASVWRLPVVFVLEDNGYGEATA 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S A A + R F +P M+ DG D AV +A+A+ RA KGP+++ + R+ Sbjct: 182 SSYACAGSQ-KARAEGFGMPYMECDGSDFFAVHQAAAEAIAHARAGKGPVMLHVHLARWY 240 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR E+ R + D + R R+ DL +I+ +VR I ++V Sbjct: 241 GHFEGDAMTYRASGEVAAERRDRDCLALFRTRVTEAGLLEHSDLDDIDASVRDEIESAVV 300 Query: 346 FAQSDKEPDPAELYSDILI 364 A+ P+P +L +D+ + Sbjct: 301 AAKQAPLPEPEDLLADVYV 319 >gi|308273033|emb|CBX29637.1| Pyruvate dehydrogenase E1 component subunit alpha [uncultured Desulfobacterium sp.] Length = 334 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 115/310 (37%), Positives = 180/310 (58%), Gaps = 2/310 (0%) Query: 56 YRLMLLIRRFEEKAGQLYG-MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y M+LIR+FEE+ +L G + G L GQEAV VG+ +L+ D +++ +R HGH Sbjct: 26 YEKMVLIRKFEERIIELAKEQGRIAGMQILSNGQEAVAVGIIEALSTEDVIVSNHRSHGH 85 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +LA G D +MAE+ G+ GG++KGK G++H+ + +VGA L G AFA Sbjct: 86 LLAKGADPRYLMAEIMGKAGGVNKGKSGTLHLAVPEVNALMTSTVVGAGPPLAAGAAFAQ 145 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 +YR I VV FGDGAA +G V+E+ N+AALW L +++V ENN +A S ++ + Sbjct: 146 QYRDEPNITVVFFGDGAAAEGSVHEAMNLAALWKLPLLFVCENNCWAGAQSYAQHCPIGD 205 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 ++RG+++ +PG VDG D+ V A +CR KGP +IE TYR RGH +D + Sbjct: 206 IAQRGIAYGMPGEYVDGNDVEKVYALSVSMADHCRNGKGPALIEAKTYRMRGHGENDHQH 265 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 Y ++E++ + P+ +RK+++ + +E +L+ IE N ++ +V FA P Sbjct: 266 YVEKDELD-FWAKKCPVGSLRKKMIQDSIVTEDELQTIETNCMVMVEEAVAFADKSPLPL 324 Query: 355 PAELYSDILI 364 E +DI + Sbjct: 325 AKEALNDIWV 334 >gi|255021217|ref|ZP_05293267.1| Pyruvate dehydrogenase (acetyl-transferring) [Acidithiobacillus caldus ATCC 51756] gi|254969332|gb|EET26844.1| Pyruvate dehydrogenase (acetyl-transferring) [Acidithiobacillus caldus ATCC 51756] Length = 355 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 109/236 (46%), Positives = 145/236 (61%), Gaps = 1/236 (0%) Query: 76 GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 G + GF HL G+EAV VG+ + GD +++ YREH H L G+ A I AEL G++ G Sbjct: 30 GEIAGFLHLYPGEEAVAVGVLHAAEPGDYVVSTYREHVHALVRGIPAHAIFAELMGKKTG 89 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG 195 IS G GGSMH+F + F GG+ IVG + G A+A YRR + + FGDGA NQG Sbjct: 90 ISGGMGGSMHLFDRERRFLGGYAIVGETFPIALGAAYAVAYRRLPEAVLCFFGDGAVNQG 149 Query: 196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIR 255 +ES N+AALW L +++V ENN Y +GT + R SA T KR ++ IP +VDGM++ Sbjct: 150 TFHESLNMAALWRLPILFVCENNHYQIGTEIHRHSALTEVYKRACAYGIPAEKVDGMEVL 209 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPI 311 AV +A+ R GP +EM TYRYRGHSM+DP +YR E+ +N DPI Sbjct: 210 AVFEATRRALTRVRTGDGPQFLEMETYRYRGHSMADPGSYRPAVEVQAYEAN-DPI 264 >gi|282889727|ref|ZP_06298266.1| hypothetical protein pah_c004o083 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500301|gb|EFB42581.1| hypothetical protein pah_c004o083 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 343 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 118/321 (36%), Positives = 175/321 (54%), Gaps = 5/321 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ K+ L A ML IR FE +A Y G +GGF H IGQEA+ V +L + + Sbjct: 18 IALLGKDLLLKALTHMLAIRNFEIRAESAYLQGKIGGFFHSYIGQEAIQVAAVQALGQEN 77 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 IT+YR H L G +IMAEL G+ G ++G+GGSMH+++ + GG GIV Q Sbjct: 78 WYITSYRCHALALLLGATPEEIMAELYGKATGNARGRGGSMHLYAKR--LLGGFGIVAGQ 135 Query: 164 VSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V + TG AF KY +CF GDGA QG +ES N+A+LW+L IYVIENN + M Sbjct: 136 VPIATGAAFQIKYSGHKNEVAICFLGDGAVAQGAFHESLNLASLWSLPCIYVIENNFWGM 195 Query: 223 GTSVSRASAQTNFSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 GT+V+RA + ++ ++N+ DGMD A P++IE+LT Sbjct: 196 GTAVNRAISFKKLAEDIAPTYNMKAYTFDGMDFFNCYAGFSHVYKEVVETGRPVLIEVLT 255 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R+RGHS+SDP YRT+E++ + DPI ++ L + + K+I+ R+ Sbjct: 256 ERFRGHSISDPGLYRTKEQLQK-SMQRDPILLMQHALEEHHLIDSEEFKKIDKEYRERAI 314 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 ++++A P+P + D+ Sbjct: 315 AAMKYADESPWPNPLSIEEDV 335 >gi|270262678|ref|ZP_06190949.1| hypothetical protein SOD_c02990 [Serratia odorifera 4Rx13] gi|270043362|gb|EFA16455.1| hypothetical protein SOD_c02990 [Serratia odorifera 4Rx13] Length = 320 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 112/318 (35%), Positives = 170/318 (53%), Gaps = 2/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +K+ L AYR M IR FEE+ Q G + GF HL G+EA+ VG+ +LT+ D + Sbjct: 3 LSKQALLQAYRKMREIRTFEERLHQENTSGDIPGFIHLYTGEEAIAVGVCENLTDADFIG 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D +MAE+ G+ G+ +GKGGSMH+ G G + IVG L Sbjct: 63 STHRGHGHCIAKGCDIHGMMAEIFGKDSGLCRGKGGSMHIADLSKGMLGANAIVGGAPPL 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A K ++ + V GDG +NQG V+E+ N+A + L +++ ENN Y GT Sbjct: 123 AIGAALTAKTLKTGNVGVSFTGDGGSNQGLVFEAMNMAVVLQLPAVFIFENNGYGEGTGH 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A + +KR F +P + VDG D AV +AV R GP +IE +R+ G Sbjct: 183 DYAVGGRDIAKRAAGFGLPAVTVDGTDFFAVYEAAAEAVKRAREGGGPSVIEAKAFRWHG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H DPA YR E+ +R HDP++ ++ K + +L I+ V ++ ++V Sbjct: 243 HFEGDPALYRAEGEVQRLREQHDPLKIFTDKI--QKQVTREELAAIDAEVEALVGDAVTK 300 Query: 347 AQSDKEPDPAELYSDILI 364 A++ P P +L +D+ + Sbjct: 301 ARAAAYPAPEDLLTDVYV 318 >gi|88854859|ref|ZP_01129525.1| acetoin dehydrogenase (TPP-dependent) alpha chain [marine actinobacterium PHSC20C1] gi|88816020|gb|EAR25876.1| acetoin dehydrogenase (TPP-dependent) alpha chain [marine actinobacterium PHSC20C1] Length = 327 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 117/302 (38%), Positives = 167/302 (55%), Gaps = 3/302 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L R M IR FE++ L+ +V G HLC GQEAV VG+ +L+ GD M YR H Sbjct: 19 LELLRSMYEIRFFEDEIMGLFSQNLVRGSTHLCQGQEAVTVGVCSALSPGDTMTCTYRGH 78 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G +LA G + E+ GR GG+ GKGGSMH+ G G + IVG + G A Sbjct: 79 GAVLAMGAPLDRAFGEILGRAGGLCGGKGGSMHLADVSVGALGSNAIVGGHLPTTVGAAL 138 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A YR + ++ V FGDG+ N G +ES N+A++W L I+VIENNQY ++++ + Sbjct: 139 AASYRGTSEVSVAFFGDGSTNIGAFHESLNLASIWKLPAIFVIENNQYGEYSTLASTTPI 198 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 S R S+ +PG+ VDG D+ A+++ AV RA +GP +IE TYR+ GHS SDP Sbjct: 199 ERLSDRAASYGMPGVFVDGNDVIAMRSATKTAVERARAGEGPTLIEADTYRHSGHSRSDP 258 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 A YR EE+ + DPI Q+R + + A E+E ++ + + A + E Sbjct: 259 AKYRPEEEVKSWFAR-DPIVQLRNAIEASGGADAA--AEVERTAHTDVDAARDLALTWPE 315 Query: 353 PD 354 P+ Sbjct: 316 PE 317 >gi|254282532|ref|ZP_04957500.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [gamma proteobacterium NOR51-B] gi|219678735|gb|EED35084.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [gamma proteobacterium NOR51-B] Length = 321 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 113/309 (36%), Positives = 171/309 (55%), Gaps = 1/309 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M IR+FEE+ + + G + GF H GQEAV VG+ LT+ D + + +R HGH Sbjct: 12 YYTMTTIRQFEERMIKEFMAGNIPGFVHTYDGQEAVGVGICTHLTDEDIIGSTHRGHGHC 71 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G D ++ E+ G+QGG+ GKGGSMH+ G G + IVG L G A + K Sbjct: 72 IAKGCDIEAMILEIMGKQGGLCNGKGGSMHIADFDRGMLGANAIVGGGPPLCNGAALSAK 131 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + I V GDG++NQG V E+ N+A + +L I++ ENN A GT A + Sbjct: 132 TLGTKNIAVSFSGDGSSNQGTVMEALNLAGVLDLPHIFIFENNHLAEGTGDEYA-VSGDI 190 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + R SF+IP ++VDG+D AV M+KAV + R+ KGP IE R+ GH + DP Y Sbjct: 191 ANRVASFDIPAVKVDGLDFFAVYDAMEKAVEHTRSGKGPYAIEADVIRFDGHFIGDPQAY 250 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R E++++R+N D ++ RKR+ ++ +L ++ I V+ + +P Sbjct: 251 RGEGELDDLRANKDCLKIFRKRVTSEGLMTDDELDMLDAQAGDAIEQGVQRGLAAPQPAV 310 Query: 356 AELYSDILI 364 ELY+D+ + Sbjct: 311 EELYTDVHV 319 >gi|118579458|ref|YP_900708.1| pyruvate dehydrogenase [Pelobacter propionicus DSM 2379] gi|118579461|ref|YP_900711.1| pyruvate dehydrogenase [Pelobacter propionicus DSM 2379] gi|118502168|gb|ABK98650.1| Pyruvate dehydrogenase (acetyl-transferring) [Pelobacter propionicus DSM 2379] gi|118502171|gb|ABK98653.1| Pyruvate dehydrogenase (acetyl-transferring) [Pelobacter propionicus DSM 2379] Length = 324 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 121/321 (37%), Positives = 178/321 (55%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 S+ KE L AYR M IR FE++ + G + GF HL G+EAV G+ M LT+ D Sbjct: 2 TSQLKKEDLLRAYRTMREIREFEDRLHIEFATGKIPGFVHLYSGEEAVATGVCMHLTDED 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ + +R HGH +A GVD +MAE+ G++ G GKGGSMH+ + G G +GIVGA Sbjct: 62 RISSTHRGHGHCIAKGVDIHGMMAEIYGKKTGTCGGKGGSMHIADLEKGMMGANGIVGAG 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 L G A A K++ + + V FGDGA+NQG + ES N+A++W L VI++ ENN YA Sbjct: 122 PPLICGAALAAKFKGNGGVGVAFFGDGASNQGTILESMNLASVWKLPVIFLNENNGYAES 181 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T VS N + R F +PG+ VDG D AV +A+ RA +GP ++E T R Sbjct: 182 TGVSYNVPTPNIADRAAGFGMPGVTVDGNDFFAVYEAAGEAIRRARAGEGPTLLECKTQR 241 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 Y GH D YR E +R D ++ ++ + + +L+ I+ V +I +S Sbjct: 242 YFGHFEGDAMTYRPNGESQNLRKTKDCLKIFAEKAIAAGLVTAAELEAIDKEVLALIEDS 301 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V A + +P A+L + + + Sbjct: 302 VVKALAAPKPTAADLLTGVYV 322 >gi|150398233|ref|YP_001328700.1| dehydrogenase E1 component [Sinorhizobium medicae WSM419] gi|150029748|gb|ABR61865.1| dehydrogenase E1 component [Sinorhizobium medicae WSM419] Length = 342 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 111/311 (35%), Positives = 169/311 (54%), Gaps = 3/311 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGM-VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 L YR M IR FEE+ G+L+ G G HL IG+E+ G+ ++ D T +R Sbjct: 10 LELYRTMRRIRTFEERVGELFVRGQSAGSMLHLSIGEESSAAGVCAAMKPQDTFTTHHRG 69 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 HG LA G D ++MAE+ G++ G +GKGGSMH+ G G + IVG + G Sbjct: 70 HGIFLARGADPKRMMAEIGGKETGYCRGKGGSMHIADMALGHLGANAIVGGGIPAVIGAG 129 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 ++++ + D + + FGDGA QG +YES N+A+LWNL V++V NNQY MGT + +A+ Sbjct: 130 LSSRHLKQDSVSIAFFGDGAMQQGILYESMNMASLWNLPVLFVCINNQYGMGTRIDQATR 189 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 T F +R +F + G VDG+D+ V+A V RA K P + + YR+ GH+ D Sbjct: 190 NTAFDQRAKAFGLNGAVVDGLDVEEVQAAARWLVDEARAGK-PGFLSVEVYRFFGHARMD 248 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YR E E R DP+ R +L+ E L E++ + ++ +++FA K Sbjct: 249 KSPYREEAEELEGRKK-DPVLFARNKLIDTGIEEERILDELDKAIAAEMDATIDFAVESK 307 Query: 352 EPDPAELYSDI 362 P ++ D+ Sbjct: 308 APPLGSMFKDV 318 >gi|124266795|ref|YP_001020799.1| pyruvate dehydrogenase (lipoamide) [Methylibium petroleiphilum PM1] gi|124259570|gb|ABM94564.1| Pyruvate dehydrogenase (lipoamide) [Methylibium petroleiphilum PM1] Length = 328 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 117/318 (36%), Positives = 181/318 (56%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE L+ YR M IR FEE+ +G G + GF HL G+EA VG+ L +GD++ Sbjct: 9 LSKEALLNCYRSMRTIRDFEERLHVDFGRGDIPGFVHLYAGEEAGGVGIMSHLGDGDRIA 68 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A GVD +M E+ G++GG GKGGSMH+ G G +GI+GA L Sbjct: 69 STHRGHGHCIAKGVDVVAMMKEIYGKKGGCGNGKGGSMHIADLSKGMMGANGILGAGAPL 128 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A A K+R+ +++ + GDGA+NQG ES N+AA+W L VI+V+ENN YA TS Sbjct: 129 ICGAALAAKFRKKNEVGICFVGDGASNQGTFLESLNLAAVWTLPVIFVVENNGYAESTSR 188 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +A ++ R F +PG+ VDG D AV + + R GP ++E+ R+ G Sbjct: 189 DYGTAVDSYVDRASGFGMPGITVDGTDFFAVYEAAGEVIKRAREGGGPSLLEVKMVRFYG 248 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D YR E++++R+N D + + + + S +L+ I+ V +I ++V+ Sbjct: 249 HFEGDAQTYRAPGELDDIRTNQDCLLKFKAHVTKAGVISAAELEAIDKEVAALIEDAVKQ 308 Query: 347 AQSDKEPDPAELYSDILI 364 A++ P A+L +D+ + Sbjct: 309 AKAAPLPTAADLLTDVYV 326 >gi|254283277|ref|ZP_04958245.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [gamma proteobacterium NOR51-B] gi|219679480|gb|EED35829.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [gamma proteobacterium NOR51-B] Length = 323 Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 160/288 (55%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +F++++ +AYR M +R F+E + + G + GF H+ G+EA+ G+ L++ D + Sbjct: 2 DFSEQELKTAYRTMRHMRNFDEIGRREFMAGTLPGFMHMYCGEEAIGAGVCAHLSDEDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G + E+ RQ G+ GKGGSMH+ K G G + IVG Sbjct: 62 ASTHRGHGHCIAKGCAIEDMALEIFCRQDGLCHGKGGSMHIADLKKGMLGANAIVGGSAP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A K R +DK+ + GDGA+NQG V+E+ N+A + L I+V ENN YA T Sbjct: 122 LAVGAALTAKTRGTDKVSIAFIGDGASNQGTVFEAMNLAVVLKLPAIFVYENNGYAEMTG 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V + + R +F +P +VDG D AV M +A + R+ KGP+ IE + R+ Sbjct: 182 VDYHCGSGDIAARAGAFGMPAHKVDGTDYFAVYEAMAEATQHARSGKGPVSIECIAPRWY 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 GH DP +YRT+EEI ++ N DPI R R++ ++ D I+ Sbjct: 242 GHFEGDPQSYRTKEEIADLEKNRDPILLFRDRVIAETGLTQSDFDAID 289 >gi|218675090|ref|ZP_03524759.1| dehydrogenase E1 component [Rhizobium etli GR56] Length = 335 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 114/319 (35%), Positives = 173/319 (54%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +++ + YR M +IRRFEE+ G + G HL G+EA VG+ + L EGD + Sbjct: 15 QLPQDKLIEVYRSMRMIRRFEERVMDEMATGDIPGNTHLYAGEEASAVGVCLHLDEGDYI 74 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GVD +MAEL G+ G GKGGS H+ + G G +GIV A Sbjct: 75 SSTHRGHGHSIAKGVDIDSMMAELFGKASGTCGGKGGSQHIADLRKGMLGANGIVAAGAP 134 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A + K + + V GDGA N+G + ESFN+A +W L +++VIE+N + T+ Sbjct: 135 ITCGAALSAKLLGTRHVAVAFAGDGAMNEGVMSESFNLAKIWMLPIVFVIEDNGFGEATA 194 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 SA + F++R SF+IP ++VDG D+ +V +AV R GP ++ + RY Sbjct: 195 NEHVSAGS-FTRRAESFDIPAIEVDGTDVFSVYEAAGEAVGRARNGGGPTMLHVHVPRYY 253 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP NYRT EE MR D + RKR+ +L ++ V I+ +V Sbjct: 254 GHYSGDPDNYRTPEEKAAMRRERDCLTNFRKRVAEVSLLEAAELDAVDRAVDAEIDRAVA 313 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ P + L +D+ + Sbjct: 314 AARAAPFPPLSALTTDVYV 332 >gi|312199132|ref|YP_004019193.1| dehydrogenase E1 component [Frankia sp. EuI1c] gi|311230468|gb|ADP83323.1| dehydrogenase E1 component [Frankia sp. EuI1c] Length = 656 Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 112/304 (36%), Positives = 171/304 (56%), Gaps = 8/304 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M LIRRFEE+A LY + GF HL IGQEA VG L + D + + +R HGH Sbjct: 20 YRRMRLIRRFEERASVLYRDSQIPGFLHLSIGQEASAVGACWPLDDRDVITSTHRGHGHC 79 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G+D +++ AEL GR+ G ++G+GGSMH+ + G +G +GIV A + + G A A + Sbjct: 80 IAKGLDVTEMFAELMGRETGTNRGRGGSMHIADPRKGIFGANGIVAAGLPIAAGAATAAQ 139 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R S + V FGDGA QG +E+ N+A++W+L VI++ ENN YA + + S +++ Sbjct: 140 LRASGGVVVAFFGDGAVGQGMFHEAVNLASVWDLPVIFLCENNHYAEFSPAADQS-RSSL 198 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + R + I VDG D+ AV M + V R P++ E TYR+ GH DP Y Sbjct: 199 ADRAQGYGIRYAHVDGNDVVAVAQAMSRHVRDLRLGARPLLFEAETYRWHGHYEGDPEAY 258 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R E++ ++ DP+ + +R+ + A+ I+ + + I +V A EP+P Sbjct: 259 RDVAEVDTWKAR-DPLVVLARRMAPTQVAA------IDREIDEQIEKAVAAASEAPEPEP 311 Query: 356 AELY 359 L+ Sbjct: 312 ETLH 315 >gi|119947203|ref|YP_944883.1| pyruvate dehydrogenase (acetyl-transferring) [Psychromonas ingrahamii 37] gi|119865807|gb|ABM05284.1| Pyruvate dehydrogenase (acetyl-transferring) [Psychromonas ingrahamii 37] Length = 329 Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 114/296 (38%), Positives = 168/296 (56%), Gaps = 2/296 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ IRRFEE+ LY + GF HL G+EA+ VG+ +LT D ++ YREHGH LA Sbjct: 20 MIRIRRFEERCVTLYNEEKIRGFLHLYNGEEAIAVGVMQALTAEDAVLATYREHGHALAR 79 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ +MAE+ G+ G S G+GGSMH+F + FYGG IV + + GIA A+K + Sbjct: 80 GLSMDSVMAEMFGKASGCSGGRGGSMHLFDSSQRFYGGSAIVAGALPIAVGIALADKMLQ 139 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + FGDGA +G+ +ES N+A LW L ++++ ENN YAMGT++ + + Sbjct: 140 RQAVTCCFFGDGAVAEGEFHESLNLAKLWQLPILFICENNLYAMGTALEIEHSNQKIHLK 199 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 S+ + +DGM++ V+A A + R GP IE TYR+RGHSM D YR Sbjct: 200 AASYGLAAQVIDGMNVIDVEAAAKLACSAIRNGAGPHFIECQTYRFRGHSMFDTQLYRNN 259 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ-SDKEP 353 +E+ + + P+ Q+ + L N +L+ IE+ V K I+ +V A +D EP Sbjct: 260 DEVEQWKKK-GPLIQLTQWLKDNHQIEPEELQAIELAVEKEIDAAVCSADAADIEP 314 >gi|239834782|ref|ZP_04683110.1| dehydrogenase E1 component [Ochrobactrum intermedium LMG 3301] gi|239822845|gb|EEQ94414.1| dehydrogenase E1 component [Ochrobactrum intermedium LMG 3301] Length = 355 Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 113/311 (36%), Positives = 169/311 (54%), Gaps = 3/311 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGG-FCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 L YR M IR FEE+ G+L+ G G HL IG+EA G+ ++ D T +R Sbjct: 23 LELYRTMRRIRTFEERVGELFVRGQTAGSMLHLSIGEEAAAAGVCAAMQPQDTFTTHHRG 82 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 HG LA G D ++MAE+ G++ G GKGGSMH+ G G + IVG + G Sbjct: 83 HGIFLARGADPRQMMAEIGGKETGYCHGKGGSMHIADMALGHLGANAIVGGGIPSVVGAG 142 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 ++KY + + + + FGDGA QG +YES N+AALW L V++V NNQY MGT V +A+A Sbjct: 143 LSSKYLKKNSVSLAFFGDGAMQQGILYESMNMAALWGLPVVFVCINNQYGMGTRVDQATA 202 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 T F +R +F + G VDG+D+ VK + R K P + + YR+ GH+ D Sbjct: 203 NTAFDQRAHAFGLNGRVVDGIDVEEVKHAAQGLIDDARLGK-PGFLSVTCYRFFGHARMD 261 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YR E E R DP++ R +LL + +A E L ++ ++ ++ +++F K Sbjct: 262 KSPYRAEAEELEGRKK-DPVKFTRDQLLSSGFAQEASLDAMDSDIAAEMDATIDFTVESK 320 Query: 352 EPDPAELYSDI 362 P ++ D+ Sbjct: 321 APPLTSMFKDV 331 >gi|300788950|ref|YP_003769241.1| 2-oxoisovalerate dehydrogenase E1 component [Amycolatopsis mediterranei U32] gi|299798464|gb|ADJ48839.1| 2-oxoisovalerate dehydrogenase E1 component [Amycolatopsis mediterranei U32] Length = 656 Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 109/285 (38%), Positives = 159/285 (55%), Gaps = 8/285 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M LIR+FE++A +LY + GF HL IGQEA VG L + D + + +R HGH Sbjct: 20 YRRMRLIRQFEDRASRLYRTNEIPGFLHLSIGQEASAVGACWPLDDRDVVTSTHRGHGHC 79 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G+D + + AEL GR+ G +G+GGSMH+ + G +G +GIV A + + TG A A + Sbjct: 80 IAKGLDVTGMFAELMGRRTGTCQGRGGSMHIADPRKGIFGANGIVAAGLPIATGAATAAQ 139 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R + + FGDGA QG +E+ N+AA+W L VI+ ENN YA S + + Sbjct: 140 LRGRGGVVLAFFGDGAVAQGMFHEAVNLAAVWQLPVIFCCENNHYAE-FSAAADQHRATL 198 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + R + + VDG D+ AV T+ VA RA GP+++E TYR+ GH DP Y Sbjct: 199 ADRARGYGVEYAHVDGNDVVAVADTVTALVADLRAGAGPVLLEAETYRWHGHYEGDPERY 258 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 R EE+ + DP+ ++ RL G + EI+ + +I Sbjct: 259 REPEELAAWKER-DPLPRLAARL------DPGRIAEIDHEIDILI 296 >gi|218666766|ref|YP_002426231.1| dehydrogenase complex, E1 component, alpha subunit, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|218518979|gb|ACK79565.1| dehydrogenase complex, E1 component, alpha subunit, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 354 Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 118/264 (44%), Positives = 161/264 (60%), Gaps = 1/264 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +K Q ++ R ML R FEE A Q Y G + GF HL G+EAV VG+ + GD +++ Sbjct: 2 DKTQMVAMLRDMLRARAFEEAAAQAYAQGHIAGFLHLYPGEEAVAVGVLHAAEPGDYVVS 61 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YREH H L G+ A +IMAEL G++ GIS G GGSMH+F F GG+ IVG + Sbjct: 62 TYREHVHALVRGIPARQIMAELHGKKTGISGGMGGSMHLFDKDRRFLGGYAIVGETFPIA 121 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G +A YR+ + + FGDGA NQG +ES N+AALW L + ++ ENN Y +GT + Sbjct: 122 LGAGYAVAYRKLPEAVLCFFGDGAVNQGTFHESLNMAALWKLPIFFICENNHYQIGTEIH 181 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R SA T KR ++ IP + DGM++ AV ++A+ RA GP +E+ TYRYRGH Sbjct: 182 RHSAITEVYKRACAYGIPAEKADGMNVIAVHEAAERALERIRAGDGPQFLELETYRYRGH 241 Query: 288 SMSDPANYRTREEINEMRSNHDPI 311 SM+D +YR E+N ++N DPI Sbjct: 242 SMADSGSYRPNVELNAYQAN-DPI 264 >gi|258653593|ref|YP_003202749.1| pyruvate dehydrogenase [Nakamurella multipartita DSM 44233] gi|258556818|gb|ACV79760.1| Pyruvate dehydrogenase (acetyl-transferring) [Nakamurella multipartita DSM 44233] Length = 339 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 121/309 (39%), Positives = 180/309 (58%), Gaps = 5/309 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R ML IRRF+E+A ++ G + G H IGQEA +VG M+L E D M +R HGH + Sbjct: 15 RRMLRIRRFDERASKMVKRGAIPGTVHTSIGQEAQVVGATMALGEHDYMTGNHRSHGHPI 74 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G +MAEL G+ GG+ GKGGS+H+ G G GIVG+ + + TG A ++K Sbjct: 75 GKGSPLGPLMAELVGKAGGVCGGKGGSLHLADFNVGSLGESGIVGSSIPIATGAALSSKV 134 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 + K+ + FGDGAANQG +YES NIA +W L VI++ ENNQYA+ T ++ + Sbjct: 135 LGNGKVSLAFFGDGAANQGCLYESLNIAGVWKLPVIFLCENNQYALSTQAWTVTSGV-IA 193 Query: 237 KRGVSFNIPGMQVD-GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS--MSDPA 293 R F IPG++V+ G DI AV + AV RA +GP ++E++TYRY HS + Sbjct: 194 DRAAGFGIPGVRVENGQDIMAVYDAVSTAVDRARAGEGPTLVEVVTYRYNEHSEGLRLAT 253 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YR +E + + DPI R+ L+ N A+ +L ++E +V + ++V F P Sbjct: 254 DYRNADEKADWLA-RDPIVLHRQYLIDNWIATTEELDQLEADVLAEVEDAVTFTNDSPFP 312 Query: 354 DPAELYSDI 362 +P+ ++D+ Sbjct: 313 EPSIAFADL 321 >gi|302867945|ref|YP_003836582.1| pyruvate dehydrogenase (acetyl-transferring) [Micromonospora aurantiaca ATCC 27029] gi|302570804|gb|ADL47006.1| Pyruvate dehydrogenase (acetyl-transferring) [Micromonospora aurantiaca ATCC 27029] Length = 323 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 117/307 (38%), Positives = 170/307 (55%), Gaps = 11/307 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR + LIRRFEE+A +L G + G H +GQE + G+ +L D + +R H Sbjct: 7 LRLYRTVRLIRRFEERAIELVRAGEIVGGIHPYLGQEGIAAGVCAALDREDLVTGTHRGH 66 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH+LA G D ++++AEL GR G+++G+GGSMH G G + IVGA ++ TG + Sbjct: 67 GHVLAKGADPARMLAELCGRVTGLNRGRGGSMHAADFGVGVLGANAIVGAAGAILTGAVW 126 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 + R +D + FGDGA N+G + E+FN+AALW + V++V ENN YA V A A Sbjct: 127 ERRRRGADIVGATFFGDGAVNEGMLLEAFNLAALWRIPVLFVCENNGYATTMPVDGAVAG 186 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T + R +F +P VDG D AV+ AVA RA GP ++E TYR+ H + Sbjct: 187 T-IAGRAAAFGMPAATVDGQDPEAVREVTAAAVARMRAGGGPELVEARTYRFDAHHTFEH 245 Query: 293 A---NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 +YR EE+ E RS DP++ RL A E++ V ++ +V++A + Sbjct: 246 QVRLDYRPPEEVAEGRSR-DPVDIAGARLDPAVRA------EVDAAVEAELDAAVDYALA 298 Query: 350 DKEPDPA 356 PDPA Sbjct: 299 GPHPDPA 305 >gi|299770288|ref|YP_003732314.1| acetoin:DCPIP oxidoreductase alpha subunit [Acinetobacter sp. DR1] gi|298700376|gb|ADI90941.1| acetoin:DCPIP oxidoreductase alpha subunit [Acinetobacter sp. DR1] Length = 320 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 110/319 (34%), Positives = 175/319 (54%), Gaps = 2/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +EQ L+AY+ M IR FE++ + G + GF HL G+EAV VG+ +LT+ D + Sbjct: 2 QLTEEQLLAAYKRMRDIREFEDRLHEENTNGDIPGFIHLYSGEEAVAVGICENLTDKDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D +M E+ G+ G+ +GKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHCIAKGCDIHAMMLEIFGKDDGLCRGKGGSMHIADLDKGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A K ++ I + GDG +NQG +E+ N+A + L VI+V ENN + GT Sbjct: 122 LAIGAALTAKTLKTGGIGLSFTGDGGSNQGLTFEAMNMAVVLKLPVIFVFENNGFGEGTG 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 A + + R F +P ++VDG D AV A+ R +GP +IE +T R+ Sbjct: 182 HDYAVGSKDIAGRAAGFGLPAVKVDGTDFFAVYEAAQTAIERARRGEGPSVIETITNRFY 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP R++EE+ ++ N DP++ R+++ E L EI+ + ++++V Sbjct: 242 GHFEGDPGLIRSKEEVEFIKENKDPLKIFREKV--KGKIDEAKLDEIDAASKANVDDAVA 299 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ P P +L +D+ + Sbjct: 300 KARAAAYPQPEQLLTDVYV 318 >gi|332203019|gb|EGJ17087.1| dehydrogenase E1 component family protein [Streptococcus pneumoniae GA47901] Length = 273 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 103/271 (38%), Positives = 160/271 (59%), Gaps = 2/271 (0%) Query: 93 VGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG 152 +G ++L D + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G Sbjct: 1 MGAMLALNPDDLITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAG 60 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 G +GIVG + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI Sbjct: 61 NLGANGIVGGGMGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVI 120 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAH 271 + NN Y + + + + + +R ++ IPGM + DG ++ V KAV + R+ Sbjct: 121 FYCINNGYGISADIKKMTNIEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFQKAVDHVRSG 180 Query: 272 KGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 GP++IE +TYR+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+E Sbjct: 181 NGPVLIESVTYRWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASAEELEE 239 Query: 332 IEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 I+ V++ + SV+FA+ P + DI Sbjct: 240 IQAQVKEAVEASVKFAEESPFPPLESAFEDI 270 >gi|198283604|ref|YP_002219925.1| pyruvate dehydrogenase (acetyl-transferring) [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248125|gb|ACH83718.1| Pyruvate dehydrogenase (acetyl-transferring) [Acidithiobacillus ferrooxidans ATCC 53993] Length = 362 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 118/264 (44%), Positives = 161/264 (60%), Gaps = 1/264 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +K Q ++ R ML R FEE A Q Y G + GF HL G+EAV VG+ + GD +++ Sbjct: 10 DKTQMVAMLRDMLRARAFEEAAAQAYAQGHIAGFLHLYPGEEAVAVGVLHAAEPGDYVVS 69 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YREH H L G+ A +IMAEL G++ GIS G GGSMH+F F GG+ IVG + Sbjct: 70 TYREHVHALVRGIPARQIMAELHGKKTGISGGMGGSMHLFDKDRRFLGGYAIVGETFPIA 129 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G +A YR+ + + FGDGA NQG +ES N+AALW L + ++ ENN Y +GT + Sbjct: 130 LGAGYAVAYRKLPEAVLCFFGDGAVNQGTFHESLNMAALWKLPIFFICENNHYQIGTEIH 189 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R SA T KR ++ IP + DGM++ AV ++A+ RA GP +E+ TYRYRGH Sbjct: 190 RHSAITEVYKRACAYGIPAEKADGMNVIAVHEAAERALERIRAGDGPQFLELETYRYRGH 249 Query: 288 SMSDPANYRTREEINEMRSNHDPI 311 SM+D +YR E+N ++N DPI Sbjct: 250 SMADSGSYRPNVELNAYQAN-DPI 272 >gi|262279019|ref|ZP_06056804.1| pyruvate/2-oxoglutarate dehydrogenase complex [Acinetobacter calcoaceticus RUH2202] gi|262259370|gb|EEY78103.1| pyruvate/2-oxoglutarate dehydrogenase complex [Acinetobacter calcoaceticus RUH2202] Length = 320 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 110/319 (34%), Positives = 176/319 (55%), Gaps = 2/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +EQ L+AY+ M IR FE++ + G + GF HL G+EAV VG+ +LT+ D + Sbjct: 2 QLTEEQLLAAYKSMRDIREFEDRLHEENTNGDIPGFIHLYSGEEAVAVGICENLTDKDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D +M E+ G+ G+ +GKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHCIAKGCDIHGMMLEIFGKDDGLCRGKGGSMHIADLDKGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A K ++ I + GDG +NQG +E+ N+A + L VI+V ENN + GT Sbjct: 122 LAIGAALTAKTLKTGGIGLSFTGDGGSNQGLTFEAMNMAVVLKLPVIFVFENNGFGEGTG 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 A + + R F +P ++VDG D AV A+ R +GP +IE +T R+ Sbjct: 182 HDYAVGSKDIAGRAAGFGLPAVKVDGTDFFAVYEAAQTAIERARRGEGPSVIETITNRFY 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP R++EE++ ++ N DP++ R+++ E L EI+ + ++++V Sbjct: 242 GHFEGDPGLIRSKEEVDFVKENKDPLKIFREKV--KGKIDEAKLDEIDAVSKANVDDAVA 299 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ P P +L +D+ + Sbjct: 300 KARAAAYPKPEQLLTDVYV 318 >gi|169796025|ref|YP_001713818.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Acinetobacter baumannii AYE] gi|184158055|ref|YP_001846394.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component subunit alpha [Acinetobacter baumannii ACICU] gi|213157241|ref|YP_002319286.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Acinetobacter baumannii AB0057] gi|215483482|ref|YP_002325699.1| acetoin:DCPIP oxidoreductase alpha subunit [Acinetobacter baumannii AB307-0294] gi|239501826|ref|ZP_04661136.1| acetoin:DCPIP oxidoreductase alpha subunit [Acinetobacter baumannii AB900] gi|260555074|ref|ZP_05827295.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Acinetobacter baumannii ATCC 19606] gi|293608147|ref|ZP_06690450.1| Acetoin:2,6-dichlorophenolindophenol oxidoreductase [Acinetobacter sp. SH024] gi|301512994|ref|ZP_07238231.1| acetoin:DCPIP oxidoreductase alpha subunit [Acinetobacter baumannii AB058] gi|301595872|ref|ZP_07240880.1| acetoin:DCPIP oxidoreductase alpha subunit [Acinetobacter baumannii AB059] gi|332874515|ref|ZP_08442418.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase, alpha subunit [Acinetobacter baumannii 6014059] gi|169148952|emb|CAM86827.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit (Acetoin:DCPIP oxidoreductase-alpha) (AO:DCPIP OR) [Acinetobacter baumannii AYE] gi|183209649|gb|ACC57047.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Acinetobacter baumannii ACICU] gi|193077332|gb|ABO12126.2| acetoin:26-dichlorophenolindophenol oxidoreductase alpha subunit [Acinetobacter baumannii ATCC 17978] gi|213056401|gb|ACJ41303.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Acinetobacter baumannii AB0057] gi|213986375|gb|ACJ56674.1| acetoin:DCPIP oxidoreductase alpha subunit [Acinetobacter baumannii AB307-0294] gi|260411616|gb|EEX04913.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Acinetobacter baumannii ATCC 19606] gi|292828720|gb|EFF87082.1| Acetoin:2,6-dichlorophenolindophenol oxidoreductase [Acinetobacter sp. SH024] gi|322508374|gb|ADX03828.1| Acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Acinetobacter baumannii 1656-2] gi|323517996|gb|ADX92377.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Acinetobacter baumannii TCDC-AB0715] gi|325122124|gb|ADY81647.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Acinetobacter calcoaceticus PHEA-2] gi|332737359|gb|EGJ68283.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase, alpha subunit [Acinetobacter baumannii 6014059] Length = 320 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 109/319 (34%), Positives = 175/319 (54%), Gaps = 2/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +EQ L+AY+ M IR FE++ + G + GF HL G+EAV VG+ +LT+ D + Sbjct: 2 QLTEEQLLAAYKRMRDIREFEDRLHEENTNGDIPGFIHLYSGEEAVAVGICENLTDKDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D +M E+ G+ G+ +GKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHCIAKGCDIHAMMLEIFGKDDGLCRGKGGSMHIADLDKGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A K ++ + + GDG +NQG +E+ N+A + L VI+V ENN + GT Sbjct: 122 LAIGAALTAKTLKTGGVGLSFTGDGGSNQGLTFEAMNMAVVLKLPVIFVFENNGFGEGTG 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 A + + R F +P ++VDG D AV A+ R +GP +IE +T R+ Sbjct: 182 HDYAVGSKDIAGRAAGFGLPAVKVDGTDFFAVYEAAQTAIERARRGEGPSVIETITNRFY 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP R++EE+ ++ N DP++ R+++ E L EI+ + ++++V Sbjct: 242 GHFEGDPGLIRSKEEVEFIKENKDPLKIFREKV--KGKIDEAKLDEIDAASKANVDDAVA 299 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ P P +L +D+ + Sbjct: 300 KARAAAYPKPEQLLTDVYV 318 >gi|226308084|ref|YP_002768044.1| acetoin dehydrogenase E1 component alpha subunit [Rhodococcus erythropolis PR4] gi|226187201|dbj|BAH35305.1| acetoin dehydrogenase E1 component alpha subunit [Rhodococcus erythropolis PR4] Length = 343 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 110/320 (34%), Positives = 172/320 (53%), Gaps = 1/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S +++ L AY M IR FE++ + G + GF HL GQEA+ VG+ +L++ D Sbjct: 23 SGLDRDALLKAYEKMSRIRAFEDRLHEENATGDIPGFIHLYSGQEAIAVGVCENLSDADY 82 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAE+ G+ G+ +GKGGSMH+ G G + IVG Sbjct: 83 IGSTHRGHGHCIAKGCDLNGMMAEIFGKDDGLCRGKGGSMHIADLSVGMLGANAIVGGAP 142 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 SL G A + K R+ I GDG +NQG V+E+ N+A + +L +++VIENN + T Sbjct: 143 SLAIGAALSGKTLRNGVIAASFTGDGGSNQGTVFEAMNMAVVLDLPIVFVIENNGFGEAT 202 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 A + + R SF +P ++VDG D AV M +A R GP IE +R+ Sbjct: 203 GTDYAVGAPDIAARAASFGMPAVKVDGTDFFAVYDAMAEASERARTGGGPTTIEAAAFRW 262 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YRT E++ ++R DP++ R + K S DL ++ R +++ +V Sbjct: 263 HGHFEGDAQLYRTAEQVAQLRETKDPLKNFRSS-VDAKKVSTADLDAVDEQSRVLVDEAV 321 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ P L +D+ + Sbjct: 322 AKARAAAYPPVENLLTDVYV 341 >gi|255320489|ref|ZP_05361670.1| pyruvate dehydrogenase E1 component subunit alpha [Acinetobacter radioresistens SK82] gi|262378382|ref|ZP_06071539.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit protein [Acinetobacter radioresistens SH164] gi|255302461|gb|EET81697.1| pyruvate dehydrogenase E1 component subunit alpha [Acinetobacter radioresistens SK82] gi|262299667|gb|EEY87579.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit protein [Acinetobacter radioresistens SH164] Length = 320 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 105/319 (32%), Positives = 177/319 (55%), Gaps = 2/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +E+ L+AY+ M IR FE++ + MG + GF HL G+EAV VG+ +LT+ D + Sbjct: 2 QLTEEKLLAAYKSMRDIREFEDRLHEENTMGDIPGFIHLYSGEEAVAVGICENLTDKDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D +M E+ G+ G+ +GKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHCIAKGCDIHAMMLEIFGKDAGLCRGKGGSMHIADLDKGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A K ++ I + GDG +NQG +E+ N+A + L VI++ ENN + GT Sbjct: 122 LAIGAALTAKTLKTGGIGLSFTGDGGSNQGLTFEAMNMAVVLQLPVIFIFENNGFGEGTG 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 A + + R F +P ++VDG D AV +A+ R GP +IE +T R+ Sbjct: 182 HDYAVGSKDIAGRAAGFGLPAVKVDGTDFFAVYEAAQQAIERARNGGGPSVIETITNRFY 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP R+++E++ ++ + DP++ R+++ L I+ + ++++V Sbjct: 242 GHFEGDPGLIRSKDEVDYVKEHRDPLKIFREKV--KDQIDLAKLDAIDAESKANVDDAVA 299 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ K P+ ++L +D+ + Sbjct: 300 KARAAKYPEVSQLLTDVYV 318 >gi|220930809|ref|YP_002507718.1| dehydrogenase E1 component [Clostridium cellulolyticum H10] gi|220001137|gb|ACL77738.1| dehydrogenase E1 component [Clostridium cellulolyticum H10] Length = 321 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 109/313 (34%), Positives = 177/313 (56%), Gaps = 4/313 (1%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E+ + YR+M IR E K + Y + HL IGQEA+ G+ ++L + D + + Sbjct: 4 ERFIELYRVMQTIRIVERKIEEEYKNDEMKTPIHLSIGQEAIAAGVCINLRKDDYLFGTH 63 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R H +A G D +++AEL R+ G + G+GGSMH+ + G +G IVG + LGTG Sbjct: 64 RSHAQYIAKGGDIKQMIAELYLRKTGCTSGRGGSMHLMAADRGIFGSTAIVGGSLPLGTG 123 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 A A+K +++D++ V FGDGAA++G +ES N A+L L ++YV ENN YA+ + ++ Sbjct: 124 TALASKIQKNDRVTAVFFGDGAADEGTFHESLNFASLKKLPILYVCENNFYAINSRQAQR 183 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-- 287 + N K + IPG Q+DG D+ V +KA+ CR +GP ++E ++YR++GH Sbjct: 184 QSGDNIYKMAQVYGIPGYQIDGNDVLKVSEYAEKAIERCRKGEGPTLLECVSYRWKGHIG 243 Query: 288 SMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 ++ D YR++EE + S PI+ + L + K I + K++ ++ EF Sbjct: 244 TVDDLGVGYRSQEEYDYWISKC-PIKWYKDYLRVRNILDDKLEKSINEEIDKLVKDAFEF 302 Query: 347 AQSDKEPDPAELY 359 A + +P P EL+ Sbjct: 303 AVNSPKPQPEELF 315 >gi|229489094|ref|ZP_04382960.1| pyruvate dehydrogenase E1 component subunit alpha [Rhodococcus erythropolis SK121] gi|229324598|gb|EEN90353.1| pyruvate dehydrogenase E1 component subunit alpha [Rhodococcus erythropolis SK121] Length = 345 Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 110/320 (34%), Positives = 172/320 (53%), Gaps = 1/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S +++ L AY M IR FE++ + G + GF HL GQEA+ VG+ +L++ D Sbjct: 25 SGLDRDALLKAYEKMSRIRAFEDRLHEENATGDIPGFIHLYSGQEAIAVGVCENLSDADY 84 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D + +MAE+ G+ G+ +GKGGSMH+ G G + IVG Sbjct: 85 IGSTHRGHGHCIAKGCDLNGMMAEIFGKDDGLCRGKGGSMHIADLSVGMLGANAIVGGAP 144 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 SL G A + K R+ I GDG +NQG V+E+ N+A + +L +++VIENN + T Sbjct: 145 SLAIGAALSGKTLRNGVIAASFTGDGGSNQGTVFEAMNMAVVLDLPIVFVIENNGFGEAT 204 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 A + + R SF +P ++VDG D AV M +A R GP IE +R+ Sbjct: 205 GTDYAVGAPDIAARAASFGMPAVKVDGTDFFAVYDAMAEASERARIGGGPTTIEAAAFRW 264 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YRT E++ ++R DP++ R + K S DL ++ R +++ +V Sbjct: 265 HGHFEGDAQLYRTAEQVAQLRETKDPLKNFRSS-VDVKKVSTADLDAVDEQSRVLVDEAV 323 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ P L +D+ + Sbjct: 324 AKARAAAYPPVENLLTDVYV 343 >gi|284173973|ref|ZP_06387942.1| pyruvate dehydrogenase alpha subunit (lipoamide) [Sulfolobus solfataricus 98/2] Length = 280 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 103/273 (37%), Positives = 154/273 (56%), Gaps = 8/273 (2%) Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +L + D + + +R HGH +A G+D +++AE+ G++ G+ KGKGGSMH+F G G + Sbjct: 4 TLRDDDYITSTHRGHGHCIAKGLDVKRMLAEIMGKKTGVCKGKGGSMHIFDYSKGMLGAN 63 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GIVG G A A K + D++ V GDGA NQG V ES N++A+W L VI+V+E+ Sbjct: 64 GIVGGGAPHAVGAALAFKLKGLDRVAVAFIGDGAMNQGVVLESLNLSAIWKLPVIFVVED 123 Query: 218 NQYAMGTSV-------SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 N YAM T R SA ++ +R + F IP ++VDGMD+ AV +AV R Sbjct: 124 NMYAMSTRSLVPGKLQPRHSAAKSYVERALGFGIPAVEVDGMDVLAVYEVAKEAVDRARR 183 Query: 271 HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 GP ++ TYR+ GH DP YR +EE EM DPI R +L+ N + +L Sbjct: 184 GGGPSLLHCKTYRFFGHFEGDPLVYRDKEE-EEMWRKRDPITLFRDKLVSNNIINSEELD 242 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +I+ + I +++FA+ P+ E +D+ Sbjct: 243 KIDREAKAEIEQALKFAEESPYPEVEEALTDVF 275 >gi|315426138|dbj|BAJ47783.1| pyruvate dehydrogenase E1 component subunit alpha [Candidatus Caldiarchaeum subterraneum] Length = 327 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 118/303 (38%), Positives = 167/303 (55%), Gaps = 5/303 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +F++E+ L R M+ IR FEE+ +LY G + G HL GQEAV VG+ +L + D + Sbjct: 5 QFSREKLLRMLRKMIEIRLFEERVEKLYREGKIIGPTHLYFGQEAVAVGVIEALDKDDVV 64 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM-FSTKNGFYGGHGIVGAQV 164 I+ YR HGH +A GV I+ E+ GR G KG GGSMH S ++ IVG+ + Sbjct: 65 ISTYRGHGHGVARGVPMKAILGEILGRAVGTCKGLGGSMHAPISVEHNIPLATAIVGSGI 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + G+ A KYR + V FGDGA N G +E+ N+AA+W L V++V ENN YAM T Sbjct: 125 PIAVGVGLAFKYREKRSVATVFFGDGAVNTGAFHEALNLAAVWRLPVLFVCENNLYAMYT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S+ A + + R + IP G D+ V T KA+ R GP+ IE TYR Sbjct: 185 SLKNVLAAESIAARASGYGIPSYVAFGNDVLEVYETTSKALEKIRNESGPVFIECRTYRQ 244 Query: 285 RGHSMSDPAN-YRTREEINE-MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 +GH D YR++EEI E MR DPI + +R+ + ++ + K+IE V ++ Sbjct: 245 KGHGGYDFGTWYRSKEEIEEWMR--RDPINMLTERMKTKGFITDEERKKIEEEVAAELDK 302 Query: 343 SVE 345 VE Sbjct: 303 VVE 305 >gi|300022312|ref|YP_003754923.1| pyruvate dehydrogenase (acetyl-transferring) [Hyphomicrobium denitrificans ATCC 51888] gi|299524133|gb|ADJ22602.1| Pyruvate dehydrogenase (acetyl-transferring) [Hyphomicrobium denitrificans ATCC 51888] Length = 321 Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 117/319 (36%), Positives = 174/319 (54%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + ++E L YR M+ IR FEE+ + G + GF HL G+EA VG+ L D + Sbjct: 2 QHSREFLLDCYRSMVTIRAFEERVHDEFAAGKIPGFVHLYAGEEASAVGICSHLDNRDAI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D ++M E+ G++GG GKGGSMH+ G G +GIVG Sbjct: 62 ASTHRGHGHCIAKGCDVGEMMKEIYGKRGGSCGGKGGSMHIADLSKGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY ++ + V GDGA+NQG ESFN+A +W+L V++V+E+N YA TS Sbjct: 122 LVCGAALTAKYLKTGGVAVAFGGDGASNQGTTLESFNLAKVWDLPVVFVVEDNGYAEATS 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S + A + R F +PG+QVDG D AV A+ R GP ++ + R Sbjct: 182 SSWSVAGSQLG-RAAGFGMPGVQVDGTDFFAVHDAARTAIERARNGGGPSLLHVKLMRIF 240 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR E+ ++R +HD ++ R+R+ + L IE NV + I+ +V Sbjct: 241 GHFEGDAMTYRAEGEVKKLREDHDCLKIFRRRVTEASLLDDSTLDAIEANVARSIDEAVS 300 Query: 346 FAQSDKEPDPAELYSDILI 364 A++D P A+L +D+ + Sbjct: 301 AAEADLPPSEADLLTDVYV 319 >gi|315505651|ref|YP_004084538.1| pyruvate dehydrogenase (acetyl-transferring) [Micromonospora sp. L5] gi|315412270|gb|ADU10387.1| Pyruvate dehydrogenase (acetyl-transferring) [Micromonospora sp. L5] Length = 323 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 116/307 (37%), Positives = 169/307 (55%), Gaps = 11/307 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR + LIRRFEE+A +L G + G H +GQE + G+ +L D + +R H Sbjct: 7 LRLYRTVRLIRRFEERAIELVRAGEIVGGIHPYLGQEGIAAGVCAALDREDLVTGTHRGH 66 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH+LA G D ++++AEL GR G+++G+GGSMH G G + IVGA ++ TG + Sbjct: 67 GHVLAKGADPARMLAELCGRVTGLNRGRGGSMHAADFGVGVLGANAIVGAAGAILTGAVW 126 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 + R +D + FGDGA N+G + E+FN+AALW + V++V ENN YA V A A Sbjct: 127 ERRRRGADIVGATFFGDGAVNEGMLLEAFNLAALWRIPVLFVCENNGYATTMPVDGAVAG 186 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T + R +F +P VDG D AV+ AV RA GP ++E TYR+ H + Sbjct: 187 T-IAGRAAAFGMPTATVDGQDPEAVREVTAAAVVRMRAGGGPELVEARTYRFDAHHTFEH 245 Query: 293 A---NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 +YR EE+ E RS DP++ RL A E++ V ++ +V++A + Sbjct: 246 QVRLDYRPPEEVAEGRSR-DPVDIAGARLDPAVRA------EVDAAVEAELDAAVDYALA 298 Query: 350 DKEPDPA 356 PDPA Sbjct: 299 GPHPDPA 305 >gi|108803199|ref|YP_643136.1| pyruvate dehydrogenase [Rubrobacter xylanophilus DSM 9941] gi|108764442|gb|ABG03324.1| Pyruvate dehydrogenase (lipoamide) [Rubrobacter xylanophilus DSM 9941] Length = 325 Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 108/308 (35%), Positives = 167/308 (54%), Gaps = 1/308 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L Y M+ +E+K + G + GF H GQE VG +L D M+ A+R Sbjct: 13 LDFYERMVRCMLWEQKLLRFIDEGKISGFYHAGRGQEGTQVGAVAALGPDDYMMYAHRGC 72 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKG-GSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 G+++A G+ SK+ + G ++G G G +H+ + G G G +G + G A Sbjct: 73 GYMVARGMPMSKLFGDFLANTEGSTRGLGAGIVHIAWPQLGILGQSGTLGGCFPIAAGAA 132 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + KYR +D++C+ FGDG AN+G +E+ N A++W L VI++ ENNQ+A+ SV A+A Sbjct: 133 LSAKYRGTDQVCLCFFGDGTANRGTFHEAANAASVWKLPVIWLCENNQWAVSVSVREATA 192 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + R ++ +PG VDG D+ AV + +AV R +GP +IE +TYR+RGH D Sbjct: 193 VKQIADRAGAYGMPGEVVDGQDVVAVYEAVSRAVERARRGEGPSLIEAMTYRFRGHYEGD 252 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 P YR REE+ R DPI + RL ASE DL++I V++ ++ + E A Sbjct: 253 PDTYRDREEVERWRKERDPILLLANRLRSEGLASEQDLEQIRARVQREVDEAAEEALGAP 312 Query: 352 EPDPAELY 359 P+ ++ Sbjct: 313 MPERERIF 320 >gi|84502314|ref|ZP_01000462.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Oceanicola batsensis HTCC2597] gi|84389674|gb|EAQ02393.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Oceanicola batsensis HTCC2597] Length = 339 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 114/318 (35%), Positives = 167/318 (52%), Gaps = 2/318 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + + E+ L LM IR FEE A + G+V G H IGQEAV G+ +L + D Sbjct: 13 ANLDSERLLPVLSLMWKIRLFEETAIEAQREGLVLGAIHPSIGQEAVAAGICPNLRQADL 72 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +++ +R HGH LA G D +M EL GR G GKGGSMH+ G G +G+VGA + Sbjct: 73 LLSTHRGHGHTLAKGADPLAMMMELFGRAEGTCGGKGGSMHIADFGVGMLGANGVVGANI 132 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 ++G G A A K RRSD I V FGDGA N+G E N A +++L V++V E+N ++ T Sbjct: 133 TIGVGAAHALKMRRSDDIAVCIFGDGAINRGPFLEGLNWARVYDLPVLFVCEDNGFSATT 192 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + R S +P +VDG D+ V A A+ R GP ++ TYR Sbjct: 193 RTRTLTGGPGAVARAESLGLPAEEVDGNDVLGVDAAARTAIDAIRQGGGPRFLQCRTYRM 252 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH+ DPA YR E+ E R+ H PI ++ + L E +++ + + + Sbjct: 253 TGHTAVDPATYRDAAEVEEWRA-HCPIARL-EGALRLAGVDEARMQQQRTEAEQYMQDVY 310 Query: 345 EFAQSDKEPDPAELYSDI 362 A+ + PDPA+ ++D+ Sbjct: 311 ARARDAEWPDPAQAFADV 328 >gi|288961016|ref|YP_003451355.1| pyruvate dehydrogenase E1 component, alpha subunit [Azospirillum sp. B510] gi|288913324|dbj|BAI74811.1| pyruvate dehydrogenase E1 component, alpha subunit [Azospirillum sp. B510] Length = 342 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 114/309 (36%), Positives = 167/309 (54%), Gaps = 3/309 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMG-MVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR M LIRR +E+ + G +V + C GQEA+ G+ + L + D + T YR Sbjct: 30 YRRMALIRRNDERFRSVIKAGRLVMPYYSPC-GQEAIPSGVSVLLRDSDYICTIYRGVHD 88 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +LA GV + AE+ GR G KGKGG MH+ ++G GIVG+ + + G+A A Sbjct: 89 MLAKGVPMPALWAEMAGRITGTCKGKGGPMHITHPESGVMVTTGIVGSSMPIANGLALAA 148 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + R D++ V FGDGA+N G +ES N+A++W L I+V +NN YA T + ++ N Sbjct: 149 QVRGEDRVAVAYFGDGASNIGAFHESLNLASVWKLPAIFVCQNNGYAEHTKYAAGTSVAN 208 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 ++R ++ IPG+ VDG D A+ A +AV R+ GP +IE T+R+ GH D + Sbjct: 209 IAERAAAYGIPGVTVDGNDPLAIYAAAHEAVERARSGGGPTLIEAKTFRFHGHVFGDADS 268 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 Y DP+ R RL+ + ASE +L IE + + I+ +VEFA S P Sbjct: 269 Y-MDPAEKAAAMAADPVPAFRTRLIADGVASEAELAAIETEIDRKIDEAVEFALSSPFPG 327 Query: 355 PAELYSDIL 363 EL DI Sbjct: 328 VEELRRDIF 336 >gi|226303931|ref|YP_002763889.1| acetoin dehydrogenase E1 component [Rhodococcus erythropolis PR4] gi|226183046|dbj|BAH31150.1| putative acetoin dehydrogenase E1 component [Rhodococcus erythropolis PR4] Length = 660 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 107/307 (34%), Positives = 164/307 (53%), Gaps = 2/307 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N E+ L AY MLLIR EE+ LY ++ GF H IGQEA VG D + + Sbjct: 6 NGEEVLCAYEKMLLIRVMEERISALYKGDIIPGFVHTSIGQEACAVGALTHARVSDVITS 65 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH+LA G++ ++MAEL G+ G + G+GGSMH+ + G +G +GIVGA + + Sbjct: 66 THRGHGHVLAKGLEPDRMMAELMGKVTGANNGRGGSMHVADPRLGIFGANGIVGAGLPIA 125 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G AFA K R + V FGDGA G +E+ N+AALW L +I++ ENN ++ +S + Sbjct: 126 VGAAFAAKDRGEGDLVVAFFGDGAIATGAFHEAMNLAALWKLPIIFLCENNGFSEFSS-T 184 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 S R + + + + G D+ AV + A R GP+ +E+ T R GH Sbjct: 185 VDQHPVPISARAAGYGMESITLAGNDVEAVADGIRPVYAQVRGGSGPVFVEVTTLRVHGH 244 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 DP YR ++E+ DP+ R R L + + L ++ VR +++ + FA Sbjct: 245 YEGDPQVYRDKDEMTRDILAADPLTVTRGR-LRERGIGDDVLDLVDKRVRAVVDEAERFA 303 Query: 348 QSDKEPD 354 ++ +P+ Sbjct: 304 RASPQPE 310 >gi|331697494|ref|YP_004333733.1| pyruvate dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326952183|gb|AEA25880.1| Pyruvate dehydrogenase (acetyl-transferring) [Pseudonocardia dioxanivorans CB1190] Length = 339 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 109/329 (33%), Positives = 173/329 (52%), Gaps = 19/329 (5%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYG--MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 N + + +R M+ IR FEE+ + + G++ G HL G EA IVG ++ GDQ+ Sbjct: 4 NSQDRVEMFRTMVRIREFEERVKRTFAEHPGVIRGHTHLADGAEASIVGSIAAIRPGDQV 63 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + YR HG+ +A G D + ++AE+ GR G+ G GGSMH+ + GF G GIVG + Sbjct: 64 MATYRCHGYPIALGTDTTAMLAEIYGRSNGLCGGYGGSMHLADPERGFLGTSGIVGQSIP 123 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 TG A+A + RR+ + + FGDGA+ QG +ES NIA+LW L +++V+ENN Y++ Sbjct: 124 QATGAAYAAQIRRAGDVVLCFFGDGASKQGAFHESLNIASLWKLPIVFVMENNSYSVSVR 183 Query: 226 VSR----ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 V + A+A + + ++++PG+ +DG D V T+ +AV+ RA +GP ++E L Sbjct: 184 VEQEDANAAAGEPLATKAKAYSMPGVTIDGGDPDVVYETVAEAVSRARAGEGPTLVESLV 243 Query: 282 YRYRGHSMS-----DPANYRTREEIN--------EMRSNHDPIEQVRKRLLHNKWASEGD 328 YR H S P +Y E + E DP+ + R L+ Sbjct: 244 YRLSAHGNSIAPPGVPLHYPEHEAVTVFGDVAEYEAAKRGDPVPRFRGALVTGGVLDAAR 303 Query: 329 LKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 I + +V+ A + EP+PA+ Sbjct: 304 ADAIVAEAADEMQRAVDGALAGPEPEPAD 332 >gi|284046524|ref|YP_003396864.1| pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] gi|283950745|gb|ADB53489.1| Pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] Length = 329 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 119/311 (38%), Positives = 172/311 (55%), Gaps = 5/311 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++ L +R M IRRFEE L+ G V G HL GQEAV VG+ +L D++ Sbjct: 14 ERDLHLELFRSMTRIRRFEELIQSLFLKGEVYGTTHLYSGQEAVAVGVSSALDTRDRVAG 73 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR HGH +A GV AS+++ E+ GR GI+ G+ GSM++ S K+G+ G +GIVG S+ Sbjct: 74 TYRGHGHAMAQGVGASELLDEMLGRATGINGGRAGSMNVTSMKHGYMGSYGIVGG--SIA 131 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 + A R + V FGDGA NQG +E N A ++ L V++V ENN Y M +++ Sbjct: 132 AAVGAALATRLDGGVAVAYFGDGATNQGYFFECLNFAHVFRLPVLFVCENNLY-MEYTLT 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 A + + R S + QVDGM + +V+ +AVA RA +GP ++E TYR+ GH Sbjct: 191 EAVSGGDILSRAASLGVEAEQVDGMQVWSVREAAQRAVARGRAGEGPTLLEARTYRFVGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 S SDPA YR E+ + R DP+ R RL A++ L ++ +V + + E Sbjct: 251 SRSDPARYRPDGELEQWR-ERDPLVLSRARLAEEGVAAD-VLDAVDTDVAAELEAARESG 308 Query: 348 QSDKEPDPAEL 358 + PDPA L Sbjct: 309 LAAPWPDPATL 319 >gi|254449456|ref|ZP_05062893.1| pyruvate dehydrogenase E1 component subunit alpha [Octadecabacter antarcticus 238] gi|198263862|gb|EDY88132.1| pyruvate dehydrogenase E1 component subunit alpha [Octadecabacter antarcticus 238] Length = 243 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 98/238 (41%), Positives = 150/238 (63%), Gaps = 5/238 (2%) Query: 125 IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 + AE G++ G KG+GGSMH+ G G +GIV + + G A ++K + K+ + Sbjct: 1 MFAEFFGKETGYCKGRGGSMHIADVAKGNLGANGIVAGGIPIAVGAALSSKRLNTGKVVL 60 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 FGDGA N+G +ES N+A++W L V+++ ENN+Y M TS+ R+++ N S+R +++ Sbjct: 61 CFFGDGANNEGAFHESLNMASIWKLPVVFICENNKYGMSTSIERSTSVKNISERAAGYSM 120 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEM 304 PG+ VDG D A+ +D AV + RA GP ++E LTYR+RGHS SD YRT+EEIN+ Sbjct: 121 PGITVDGNDFNAITEAVDTAVEHARAGNGPSLVESLTYRWRGHSKSDRNRYRTKEEINDW 180 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + DPI + L+ N+ ++GD+K +E +V I ++EFA+S PDP L SD+ Sbjct: 181 -IDRDPIIRFSSFLIENEVLNDGDVKAMEASVDAEIEAAIEFAKSG--PDP--LLSDV 233 >gi|332703803|ref|ZP_08423891.1| Pyruvate dehydrogenase (acetyl-transferring) [Desulfovibrio africanus str. Walvis Bay] gi|332553952|gb|EGJ50996.1| Pyruvate dehydrogenase (acetyl-transferring) [Desulfovibrio africanus str. Walvis Bay] Length = 330 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 107/307 (34%), Positives = 165/307 (53%), Gaps = 2/307 (0%) Query: 59 MLLIRRFEEKAGQLYG-MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 M+L+R FE + +L V G L GQEA V +LT D +++ +R HGH+LA Sbjct: 18 MILVRAFENRLSKLVADKEDVLGMQILATGQEAASVASVQALTPEDVIVSNHRSHGHLLA 77 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 D IMAE+ G+ G++KGK G++H+ + +VGA S+ G AFA +YR Sbjct: 78 RNADIKAIMAEIMGKATGVNKGKSGTLHLIVPEVNALMTSTVVGAGPSMAAGAAFAQQYR 137 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 I V FGDGAA +G V+E+ N+A +W L ++++ ENN +A ++ A N + Sbjct: 138 GERAITAVFFGDGAAAEGNVHEAMNLAGVWKLPLLFICENNCWAGAQALKEHCAVGNIAV 197 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 R S+ +PG VDG D V + + + +CR+ KGP ++E TYR RGH D +Y Sbjct: 198 RASSYGMPGKLVDGNDADEVHSAVSELAEHCRSGKGPALLEAYTYRMRGHGEHDHQHYVD 257 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 +EE+ E+ + DPI R RL+ +E D++ +E + + +V FA P P Sbjct: 258 KEEL-ELWAAKDPIRIYRARLVQEGLLTEEDVRVMERDASARVEEAVRFAAESPFPAPEA 316 Query: 358 LYSDILI 364 D+ + Sbjct: 317 AVEDVWV 323 >gi|209542924|ref|YP_002275153.1| dehydrogenase E1 component [Gluconacetobacter diazotrophicus PAl 5] gi|209530601|gb|ACI50538.1| dehydrogenase E1 component [Gluconacetobacter diazotrophicus PAl 5] Length = 311 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 108/310 (34%), Positives = 166/310 (53%), Gaps = 6/310 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + A R M+LIR FEE G F L G+EAV VG+ +L GDQ++T R Sbjct: 7 IEALRDMMLIRAFEEALSARKDHG----FQLLSSGEEAVAVGLASALEAGDQLLTGGRSI 62 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ILA GV ++MAEL GR GG+++G+ G HM + +GF+G H +VG +S+ G+A Sbjct: 63 GPILARGVAPERVMAELLGRTGGMNRGRAGRGHMSAPDDGFFGAHAVVGGNISIAAGVAL 122 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + + I V+ FGDGA G ++E+ N+AALW L +++V NNQ ++ T+ A A Sbjct: 123 ARQMDGTGGIVVILFGDGACGAGALHETLNMAALWKLPLLFVCNNNQLSVSTAREAALAV 182 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 S G +F + +DG+D+ V AT +AV + R +GP +E + R R HS + Sbjct: 183 PRLSDLGATFGLWARTIDGLDVGLVAATAAEAVRHVRDGRGPAFLECTSIRLRSHSTT-A 241 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 R+R E+ +R+ H PIE+ L DL+ ++ ++ +A + Sbjct: 242 RETRSRAELTALRT-HCPIERTITALRTEGILDAADLERMQQQATSRATQALAYADASPY 300 Query: 353 PDPAELYSDI 362 PD E+ + Sbjct: 301 PDAEEVLHHV 310 >gi|326203935|ref|ZP_08193797.1| Pyruvate dehydrogenase (acetyl-transferring) [Clostridium papyrosolvens DSM 2782] gi|325986033|gb|EGD46867.1| Pyruvate dehydrogenase (acetyl-transferring) [Clostridium papyrosolvens DSM 2782] Length = 321 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 110/312 (35%), Positives = 172/312 (55%), Gaps = 4/312 (1%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E+ + Y+ M IR E K + Y + HL IGQEA+ G+ + L D + + Sbjct: 4 EKLIELYKTMQTIRSVERKIEEEYKNDEMKTPIHLSIGQEAIAAGVCIHLRNEDYLFGTH 63 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R H +A G D K++AEL R+ G + G+GGSMH+ + G +G IVG + LGTG Sbjct: 64 RSHAQYIAKGGDIRKMIAELYLRKTGCTSGRGGSMHLMAPDRGIFGSTAIVGGSLPLGTG 123 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 A A+K +++D++ V FGDGAA++G +ES N A+L L VIYV ENN YA+ + Sbjct: 124 TALASKIQKNDRVTAVFFGDGAADEGTFHESLNFASLKKLPVIYVCENNFYAINSHQKER 183 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-- 287 + N K + IP Q+DG D+ V +KAV CR +GP+++E ++YR++GH Sbjct: 184 QSGDNIYKIAQGYGIPSYQIDGNDVLKVYEYAEKAVEQCRRGEGPVLLECVSYRWKGHIG 243 Query: 288 SMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 ++ D +R +EE + S PI+ ++ L ++ K I + K++ ++ EF Sbjct: 244 TVDDLGVGFRPQEEYDYWISKC-PIKWYKEYLKSRNILNDALEKSIHKEIDKLVKDAFEF 302 Query: 347 AQSDKEPDPAEL 358 A + +P P EL Sbjct: 303 AINSPKPQPEEL 314 >gi|70950491|ref|XP_744565.1| pyruvate dehydrogenase E1 component, alpha subunit, [Plasmodium chabaudi chabaudi] gi|56524569|emb|CAH75083.1| pyruvate dehydrogenase E1 component, alpha subunit, putative [Plasmodium chabaudi chabaudi] Length = 415 Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 122/369 (33%), Positives = 189/369 (51%), Gaps = 57/369 (15%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K + + Y M L R FE +LY + GF HL GQEA+ G+ +L D +++ Sbjct: 12 KNEICTLYEDMNLGRLFENLVAKLYYNKKINGFVHLYNGQEAISTGVIKNLRNSDFVVST 71 Query: 109 YREHGHILACGVDASKIMAELTGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ V A +I+ EL G G ++GKGGSMH++S KN F GG G +G Q+ + Sbjct: 72 YRDHVHALSKNVSAKEILNELYGNYYGSTNQGKGGSMHIYSKKNNFIGGFGFIGEQIPIA 131 Query: 168 TGIAFANKYRR-----------------------------------------------SD 180 G+A++ Y++ +D Sbjct: 132 VGLAYSILYKKEFTENFSDTPTSAYQAILENKNTIVNTASNDKDDPEKNDDQTERTDEND 191 Query: 181 KICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA--QTNFSK 237 VVCF GDG +N GQ YES N+A+ +NL +I+VIENN +A+G SR+S TN K Sbjct: 192 LDVVVCFLGDGTSNIGQFYESLNLASTYNLPIIFVIENNNWAIGMEGSRSSLGDLTNNYK 251 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK-GPIIIEMLTYRYRGHSMSDPANYR 296 +G +FN+ +VDG D+ ++ + K + R K GP++IE +TYR RGHS++DP R Sbjct: 252 KGEAFNVTTYKVDGNDVLSIYKIVKKKIYEIRKKKSGPVLIEAITYRTRGHSLADPDLLR 311 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD----KE 352 +E N + DPI Q+ + +N + ++ +++K + ++ A S+ K Sbjct: 312 RLDEKNSWKK-IDPIIQLSNYMKNNNIVDSTYFENVKKDIQKTLLDAQNDADSNFEKSKN 370 Query: 353 PDPAELYSD 361 D +LY+D Sbjct: 371 IDVCKLYND 379 >gi|225569596|ref|ZP_03778621.1| hypothetical protein CLOHYLEM_05690 [Clostridium hylemonae DSM 15053] gi|225161804|gb|EEG74423.1| hypothetical protein CLOHYLEM_05690 [Clostridium hylemonae DSM 15053] Length = 327 Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 122/315 (38%), Positives = 174/315 (55%), Gaps = 2/315 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 +E+ + YR M LIR++EE L+ G++ G H GQEA VGM L + D ++T Sbjct: 7 RERAVGMYRDMYLIRQYEETIYYLFLEGIMPGTIHQSHGQEACAVGMIYDLRKEDYILTT 66 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R GH LA GV +M E+ G+ G KGKGG+MH G + IVG + + Sbjct: 67 HRPAGHDLAKGVSLRSMMCEMFGKAEGCCKGKGGAMHTGDISVGAITANAIVGGNLPIAA 126 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A K ++D + V FGDGA+N+G +E+ N AA+W L V+YV ENN Y+ TS+ Sbjct: 127 GVALRCKLMKTDNVAVCFFGDGASNEGAFHEALNAAAVWKLPVVYVCENNLYSATTSIKM 186 Query: 229 ASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 N + RG ++ IP VDG D+ AV +A+ R +GP I+E+ TYR GH Sbjct: 187 TCNLENVAADRGPAYGIPAEVVDGNDVLAVNEAAARAIERARKGEGPTILELKTYRIGGH 246 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 S +D YR +E E S DP++ RKRLL + SE +L IE + I VE+A Sbjct: 247 SRNDACGYRPEDEEKEWFS-RDPVQSFRKRLLEEEIISEEELIRIEEEIEAEIEAEVEYA 305 Query: 348 QSDKEPDPAELYSDI 362 ++ K+PDP D+ Sbjct: 306 KNSKDPDPESALRDV 320 >gi|29840239|ref|NP_829345.1| pyruvate dehydrogenase, E1 component, alpha subunit [Chlamydophila caviae GPIC] gi|29834587|gb|AAP05223.1| pyruvate dehydrogenase, E1 component, alpha subunit [Chlamydophila caviae GPIC] Length = 341 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 115/301 (38%), Positives = 164/301 (54%), Gaps = 4/301 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLLIR FE + + Y G+VGGF H GQEAV + ++YR H + Sbjct: 38 MLLIREFETRGEEAYLEGLVGGFYHSYSGQEAVATATLANTGLDQWFFSSYRCHALAILL 97 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 + + AEL GR+ G + G+GGSMHM F GG GIVG Q+ L G AFA KYR Sbjct: 98 NIPLRSLAAELLGRETGCALGRGGSMHMCGPN--FPGGFGIVGGQIPLAAGAAFAMKYRG 155 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK- 237 DKI + GDGA QG +E+ N A+L +L ++ VIENN + MGT+++RA A+ + Sbjct: 156 EDKIALGFIGDGAVAQGVFHETLNFASLHSLPLMLVIENNGWGMGTALNRAIAKQPIGES 215 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +G S+NI ++G D+ +A Y + + P+I+E L R+RGHS+SDP YR+ Sbjct: 216 QGSSYNIRSFTLNGFDLFNCLLGFKEAYEYMQKTRLPVIVECLCSRFRGHSISDPNLYRS 275 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 +EE+ + DPI + L+ SE +E+ R + + A+SD EP A Sbjct: 276 KEEM-QCLIKKDPIIFAKNWLIQLGVLSEEKFQELRQECRSEVLKAFTEAKSDPEPAIAT 334 Query: 358 L 358 L Sbjct: 335 L 335 >gi|186474528|ref|YP_001863499.1| dehydrogenase E1 component [Burkholderia phymatum STM815] gi|184198487|gb|ACC76449.1| dehydrogenase E1 component [Burkholderia phymatum STM815] Length = 325 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 111/319 (34%), Positives = 169/319 (52%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +F +E+ + AYR M IRRFEE+ G + G HL GQEA VG+ + LT+ D + Sbjct: 5 KFPRERLVDAYRAMRTIRRFEERVMDEMATGDIPGNTHLYAGQEASAVGVCLHLTDTDYI 64 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R GH +A G D +MAEL GR G GKGGS H+ + G G +GIV Sbjct: 65 SSTHRGRGHCIAKGCDIGAMMAELFGRATGTCGGKGGSQHIADLRKGMLGANGIVAGGAP 124 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A K + + V GDGA N+G + ESFN+A +W L +++VIE+N + T+ Sbjct: 125 ITCGAALTAKLLGTGGVAVAFAGDGAMNEGAMAESFNLAKIWMLPIVFVIEDNGFGEATA 184 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 SA + F++R ++IP ++VDG D+ AV + A+ R GP ++ + RY Sbjct: 185 NEFVSAGS-FTRRAQCYDIPAVEVDGTDLFAVYDSAGAAIERARTGGGPSLLHIHVPRYY 243 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP NYRT EE MR D + R+R+ +L I+ + ++ +V Sbjct: 244 GHYSGDPDNYRTVEEKKAMRQERDCLANFRRRVQEGSQVDSSELDAIDGQIEADVDAAVS 303 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ P + L +D+ + Sbjct: 304 AARAAPFPPLSALTADVYV 322 >gi|111026858|ref|YP_708836.1| pyruvate dehydrogenase [Rhodococcus jostii RHA1] gi|110825397|gb|ABH00678.1| probable pyruvate dehydrogenase [Rhodococcus jostii RHA1] Length = 344 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 1/319 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V+E + LS YRLM+L R FEE+ G ++ G +GG+ H CIG EA + E D Sbjct: 21 VTERSDADLLSTYRLMVLAREFEEQLGAIFAAGKLGGWFHSCIGHEATGAAAAALMRETD 80 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ +R IL G+ A + E+ GR S+G+ G H+ YG G++GA Sbjct: 81 HLVPYHRSRVSILGKGMTARDLAMEIMGRATAPSRGRAGETHINYAPARIYGTTGVLGAN 140 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G+A+ + R D++ V FG+G +N+G +E+ N+AA+W+L VI++ ENN YA Sbjct: 141 IPIAAGVAYGVQQRGLDEVVVCGFGEGTSNRGAFHEALNMAAIWDLPVIFICENNLYAEF 200 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 +S + + R + IPG+ VDG D AV T+ A R GP ++E TYR Sbjct: 201 SSSRDQMRCADVADRAAGYGIPGVVVDGNDPGAVYTTLAAAFERARGGGGPTLVEAKTYR 260 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GH DP +YR + E+ E + DP+ R RLL + +E L E I + Sbjct: 261 LNGHYEGDPQSYRDKAEVAEW-AERDPVTCYRARLLQQQNVTEEQLHTAEREAADEIRTA 319 Query: 344 VEFAQSDKEPDPAELYSDI 362 + A + +++ DI Sbjct: 320 MTEALNAPPAGKDDIFGDI 338 >gi|330837241|ref|YP_004411882.1| Pyruvate dehydrogenase (acetyl-transferring) [Spirochaeta coccoides DSM 17374] gi|329749144|gb|AEC02500.1| Pyruvate dehydrogenase (acetyl-transferring) [Spirochaeta coccoides DSM 17374] Length = 677 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 104/273 (38%), Positives = 158/273 (57%), Gaps = 1/273 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F +Q A +M+ R FEEK L+ G + G HL GQEAV VG+ ++L++GD ++ Sbjct: 6 FMIQQGTHALTVMVRSRLFEEKLDNLFAEGHLHGTTHLSSGQEAVQVGVALALSDGDWIV 65 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +R HGH +A G + +E+ G G+SKG GGSMHM +G GG +VG+ V+L Sbjct: 66 PTHRCHGHTIARGASPYAMFSEMFGSVHGLSKGLGGSMHMTDLAHGNPGGSAVVGSGVAL 125 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 TG A A K + V FGDGA+++G ++E+ N+A+LW L VI++ ENNQY M V Sbjct: 126 ATGAALAMKRLGQKNVTVAFFGDGASSRGVIHETMNLASLWKLPVIFLCENNQYGMSAPV 185 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + A + + + RG ++ IP +DG D+ V + A + R+ +GP++IE +TYR G Sbjct: 186 ASAVSAPSIASRGAAYGIPSCTIDGNDVSDVFHAVRDAASRARSGEGPVLIEAVTYRIAG 245 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 HS +D E + + DPI ++R L+ Sbjct: 246 HSRND-RRRYRSREEEALWAEQDPILRLRDELI 277 >gi|146275784|ref|YP_001165944.1| dehydrogenase, E1 component [Novosphingobium aromaticivorans DSM 12444] gi|145322475|gb|ABP64418.1| dehydrogenase, E1 component [Novosphingobium aromaticivorans DSM 12444] Length = 324 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 112/321 (34%), Positives = 168/321 (52%), Gaps = 2/321 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + ++E L AYR M +IR FEE+ G + GF HL GQEAV VG+ L+ D++ Sbjct: 2 QLSREALLRAYRQMKVIREFEERLHVDIQTGEIAGFTHLYCGQEAVAVGVCEHLSVEDKI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ++ +R HGH LA G D + +M E+ G + G+ KGKGGSMH+ G G +GIVGA Sbjct: 62 VSTHRGHGHCLAKGCDVNGMMKEIWGSREGLCKGKGGSMHIADVDKGMLGANGIVGAGAP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A K K+ + GDGA NQG +E+ N+A + I+V ENN Y+ T Sbjct: 122 IAVGAGIAAKIDGKGKVAITFSGDGACNQGTTFEAMNMAVVTKAATIFVFENNHYSEHTG 181 Query: 226 VSRASAQT-NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH-KGPIIIEMLTYR 283 A T + + R +F + + DG D +V TM + + Y R GP +E T R Sbjct: 182 FEYAVGTTKDIASRAEAFGMKVWRGDGTDFFSVFETMREVLDYVRVPGNGPAAVEFDTER 241 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 + GH DP YR EI+ +R D +++ R+ + K + DL ++ V + I S Sbjct: 242 FFGHFEGDPQRYRGPGEIDRIRETRDCLKKFRESVTAAKLLTHEDLDALDAEVMEAIEES 301 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V A++ P ++ +D+ I Sbjct: 302 VRQAKAADRPTAEDVLTDVYI 322 >gi|254451367|ref|ZP_05064804.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Octadecabacter antarcticus 238] gi|198265773|gb|EDY90043.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Octadecabacter antarcticus 238] Length = 326 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 107/306 (34%), Positives = 169/306 (55%), Gaps = 4/306 (1%) Query: 59 MLLIRRFEEKAGQLYGMGM-VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 M +R FE++ G+LY G G HL IG+E+ VG+ ++ +GD T +R HG LA Sbjct: 1 MRRVRTFEDRVGELYLRGASAGSMLHLSIGEESAAVGVCSAMRDGDTFTTHHRGHGIFLA 60 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 G D +++M+E+ G++ G +GKGGSMH+ G G + IVG + G A K+R Sbjct: 61 RGADPNRMMSEIGGKETGYCRGKGGSMHIADMSLGHLGANAIVGGGIPAIVGAALVAKHR 120 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 ++ + + FGDGA QG +YES N+AALW+L I+V NNQ+ MGT + +A+ T + Sbjct: 121 KTGAVSIAFFGDGAMQQGVLYESMNMAALWDLPAIFVCINNQWGMGTRIDQATKSTKLHE 180 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 R +F + VDG D+ V ++ V RA P + + YR+ GH D + YR+ Sbjct: 181 RARAFGLNAETVDGRDVLDVVEAANRIVDGARAGT-PGFLAIDCYRFYGHGRKDKSPYRS 239 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 EE E R+ DP+E R+ L+ N E +L ++ + ++ ++EF +EP Sbjct: 240 DEEEAEGRAK-DPVEFSRRMLIKNGVNVE-ELDAVDAKIDAEMDATIEFTIKSEEPALNT 297 Query: 358 LYSDIL 363 ++ D+ Sbjct: 298 MFRDVF 303 >gi|284033934|ref|YP_003383865.1| Pyruvate dehydrogenase (acetyl-transferring) [Kribbella flavida DSM 17836] gi|283813227|gb|ADB35066.1| Pyruvate dehydrogenase (acetyl-transferring) [Kribbella flavida DSM 17836] Length = 316 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 113/304 (37%), Positives = 167/304 (54%), Gaps = 11/304 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR + LIRRFEE+A G + G H +GQEA+ G+ +L D + + +R HGH+ Sbjct: 7 YRTVRLIRRFEERAIGFVRSGEIVGGIHPYVGQEAIAAGVCAALRPDDVITSTHRGHGHV 66 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D ++++AEL GR+ G++KG+GGSMH G G + IVGA S+ TG A+A + Sbjct: 67 LAKGADPARMLAELMGRESGLNKGRGGSMHAADFGLGVLGANAIVGAAGSIATGAAWAYR 126 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + D + FGDGA N+G + E+FN+AALW + V++V ENN YA V A A + Sbjct: 127 RQGRDVVAASFFGDGAMNEGMLLEAFNLAALWQVPVVFVCENNGYATTMPVQSAVAGS-I 185 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD---P 292 + R +F +P VDG D V A AVA R+ +GP +E TYR+ H + Sbjct: 186 TGRARAFGMPAFTVDGQDPEKVLAATSAAVARARSGRGPTFLECTTYRFDAHHTFEHRTR 245 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 NYR+ EE++ RS DP+E + + ++ + +++ + FA Sbjct: 246 LNYRSTEELSTGRSR-DPVE------IQGARLAAELRAAVDAEIEALLDAAAGFALGSAH 298 Query: 353 PDPA 356 PDPA Sbjct: 299 PDPA 302 >gi|15077463|gb|AAK83190.1|AF333038_37 putative pyruvate dehydrogenase [Streptomyces viridochromogenes] Length = 334 Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 124/313 (39%), Positives = 174/313 (55%), Gaps = 15/313 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M LIR FEE+ + G + G H IGQEAV G+ +LT+ D + + +R HGH+ Sbjct: 20 YRTMRLIREFEERCLAMSLSGEIVGGIHPYIGQEAVAAGVCAALTDDDVVTSTHRGHGHV 79 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D +++AEL G G+++G+GGSMH G YG +GIVGA + G A++ + Sbjct: 80 LAKGADPKRMLAELCGTTAGLNRGRGGSMHAADVSLGVYGANGIVGAGAPIAAGAAWSFQ 139 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R ++ V FGDGA +QG V E+FN+AALW L V++V ENN YA + RA A Sbjct: 140 RRGDGRVAVAFFGDGALSQGVVLEAFNLAALWRLPVVFVCENNGYATSLPLDRALAGDPV 199 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-- 293 +R F + VDGMD AV +AV CR GP ++ TYR+ GH + Sbjct: 200 -ERAAGFGLTARAVDGMDADAVADAAAEAVERCRRGGGPTFLDCRTYRFNGHHSFEEQVG 258 Query: 294 -NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 NYR E+ E R+ DP+ R+ A+ G I+ +I+ +VEFA++ + Sbjct: 259 LNYRDDAEVGEWRAR-DPLRTQSTRV---DGATAG---AIDAETSTLIDEAVEFARAGRA 311 Query: 353 PDPAE----LYSD 361 PDPAE LY+D Sbjct: 312 PDPAEALHHLYAD 324 >gi|77917958|ref|YP_355773.1| acetoin:DCPIP oxidoreductase subunit alpha [Pelobacter carbinolicus DSM 2380] gi|434023|gb|AAA18915.1| acetoin:DCPIP oxidoreductase alpha subunit [Pelobacter carbinolicus DSM 2380] gi|1220435|gb|AAA91875.1| acetoin:DCPIP oxidoreductase alpha subunit [Pelobacter carbinolicus DSM 2380] gi|77544041|gb|ABA87603.1| acetoin:DCPIP oxidoreductase alpha subunit [Pelobacter carbinolicus DSM 2380] Length = 326 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 118/322 (36%), Positives = 174/322 (54%), Gaps = 2/322 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +KE L AYR M IR FE++ + G + GF HL G+EAV VG+ L + D+ Sbjct: 3 TQLSKEDLLKAYRKMREIREFEDRVHVEFAKGTLPGFVHLYSGEEAVAVGVCSHLNDLDR 62 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A GV+ +MAE+ G++ G GKGGSMH+ G G +GIVGA Sbjct: 63 IASTHRGHGHCIAKGVELEGMMAEIYGKKTGTCGGKGGSMHIADLDKGMMGANGIVGAGP 122 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A+K R+ + VV FGDGA+NQG +ES N A +L +I+V+ENN YA T Sbjct: 123 PLIAGAALASKLRKDGSVGVVFFGDGASNQGTNFESMNFAVTLDLPMIFVLENNGYAEST 182 Query: 225 S--VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 S S N + R F +P + VDG D AV +A+ R GP IE T Sbjct: 183 SPKYSAKVGSDNIADRARGFGMPAVTVDGNDFFAVYEAAGEAIERARKGGGPTFIECKTM 242 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RY GH D YR + E+ + R+N P+++ + D++ I+ +V + Sbjct: 243 RYFGHFEGDAQTYRPKNEVKDARANDCPLKRFADAAISAGLVEAADIEAIDKDVLAQVEK 302 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 +V+ A+ +PD L +D+ + Sbjct: 303 AVKDAEVAPQPDMEALMADVYV 324 >gi|295400841|ref|ZP_06810817.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacillus thermoglucosidasius C56-YS93] gi|294977104|gb|EFG52706.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacillus thermoglucosidasius C56-YS93] Length = 328 Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 117/319 (36%), Positives = 172/319 (53%), Gaps = 12/319 (3%) Query: 56 YRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 Y M IR +E+K + Y G G V G HL GQE VG+ + L + D + Sbjct: 12 YETMYKIRYYEDKMAEAYAEGKNPVFNIGAGPVPGEMHLATGQEPAAVGICVHLKKEDTV 71 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R H H +A GVD +++ AE+ G+ G+ KGKGG MH+F F G GIVGA + Sbjct: 72 TSPHRPHHHAIAKGVDLNRMTAEIFGKVTGLGKGKGGHMHLFDPDVKFSCG-GIVGAGIP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A A K + +D + V G+GAANQG +ES N+AALWNL +I VIENNQY + Sbjct: 131 HALGAALAAKKKGTDWVAVAFIGEGAANQGAFHESLNMAALWNLPLIVVIENNQYGISVP 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S +++ + R V++ I G V D + +AV R +GP IIE+ TYRY Sbjct: 191 KSASTSVPSNDIRAVAYGIKGYYVKDNDPIEMYNVSKEAVERARRGEGPSIIEIETYRYL 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR + E+ +R DPI ++R+ L+ E L +E ++ ++ + + Sbjct: 251 GHFQGDPEVYRDKNEVTLLREK-DPIVRMRQILIKEHGIEEQRLIALENKAKQEVDAAYQ 309 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ P+PA+ D+ + Sbjct: 310 FARESDYPEPADALKDLFV 328 >gi|312111306|ref|YP_003989622.1| pyruvate dehydrogenase (acetyl-transferring) [Geobacillus sp. Y4.1MC1] gi|311216407|gb|ADP75011.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacillus sp. Y4.1MC1] Length = 327 Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 117/319 (36%), Positives = 172/319 (53%), Gaps = 12/319 (3%) Query: 56 YRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 Y M IR +E+K + Y G G V G HL GQE VG+ + L + D + Sbjct: 11 YETMYKIRYYEDKMAEAYAEGKNPVFNIGAGPVPGEMHLATGQEPAAVGICVHLKKEDTV 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R H H +A GVD +++ AE+ G+ G+ KGKGG MH+F F G GIVGA + Sbjct: 71 TSPHRPHHHAIAKGVDLNRMTAEIFGKVTGLGKGKGGHMHLFDPDVKFSCG-GIVGAGIP 129 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A A K + +D + V G+GAANQG +ES N+AALWNL +I VIENNQY + Sbjct: 130 HALGAALAAKKKGTDWVAVAFIGEGAANQGAFHESLNMAALWNLPLIVVIENNQYGISVP 189 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S +++ + R V++ I G V D + +AV R +GP IIE+ TYRY Sbjct: 190 KSASTSVPSNDIRAVAYGIKGYYVKDNDPIEMYNVSKEAVERARRGEGPSIIEIETYRYL 249 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR + E+ +R DPI ++R+ L+ E L +E ++ ++ + + Sbjct: 250 GHFQGDPEVYRDKNEVTLLREK-DPIVRMRQILIKEHGIEEQRLIALENKAKQEVDAAYQ 308 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ P+PA+ D+ + Sbjct: 309 FARESDYPEPADALKDLFV 327 >gi|258652325|ref|YP_003201481.1| pyruvate dehydrogenase [Nakamurella multipartita DSM 44233] gi|258555550|gb|ACV78492.1| Pyruvate dehydrogenase (acetyl-transferring) [Nakamurella multipartita DSM 44233] Length = 726 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 123/347 (35%), Positives = 178/347 (51%), Gaps = 33/347 (9%) Query: 37 PFLEGFEVSEFNKEQE----LSA-YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAV 91 P+ E EV++ + E L+A Y ++LIR FEE +L G++ G H IGQE Sbjct: 12 PWTE-IEVTDADWEAADPDLLTAMYSQLVLIRTFEETVLELSAAGLIHGPAHSSIGQEGG 70 Query: 92 IVGMKMSLTEGDQMITAYREH--------GHILACGVDAS------------KIMAELTG 131 VG + LT D + +R H GH+ G+D + +AE+ G Sbjct: 71 AVGSTIGLTSQDTVNGTHRGHHQFLAKVLGHLAPAGIDPRAPIPTDVRAELLRTLAEICG 130 Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 + G S G+GGSMH+ S G G + IVG V L G A+A++ +D + V FGDGA Sbjct: 131 LERGFSHGRGGSMHLMSKPAGAIGTNAIVGGGVPLAAGSAWAHRQAGTDAVAVTYFGDGA 190 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 AN G E+FN+AA WNL + + IENN+YA+ TSV A+ + S RG F I +VDG Sbjct: 191 ANIGSTLETFNLAAAWNLPLCFFIENNRYAVSTSVHEATKEPRLSARGPGFGIASWKVDG 250 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN---YRTREEINEMRSNH 308 M+ AV TM +A+A+ R+ +GP +IE YR+ + + P + YR++ E + R Sbjct: 251 MNPFAVFLTMQEALAHMRSGRGPTVIEADVYRFFHQNGAFPGSAFGYRSKAEEQQWR-ER 309 Query: 309 DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 DPI QV +L+ + DL ++ E A EP P Sbjct: 310 DPIAQVAGQLVRRHILTPADLDAFGTQAATVL---AELADVLVEPVP 353 >gi|124804184|ref|XP_001347927.1| pyruvate dehydrogenase E1 component, alpha subunit, putative [Plasmodium falciparum 3D7] gi|23496180|gb|AAN35840.1|AE014839_49 pyruvate dehydrogenase E1 component, alpha subunit, putative [Plasmodium falciparum 3D7] gi|44970588|gb|AAS49636.1| pyruvate dehydrogenase alpha subunit [Plasmodium falciparum] Length = 608 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 118/331 (35%), Positives = 174/331 (52%), Gaps = 41/331 (12%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 +E+ + Y M L R FE +LY V GF HL GQEAV G+ +L D + + Sbjct: 190 REEICTLYEDMYLGRLFENLVAKLYYNKRVNGFVHLYNGQEAVSTGIIKNLKNSDFVTST 249 Query: 109 YREHGHILACGVDASKIMAELTGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A KI+ EL G G +KGKGGSMH++S +N F GG G +G Q+ + Sbjct: 250 YRDHVHALSKGVPAHKILNELYGNYYGSTNKGKGGSMHIYSKENNFIGGFGFIGEQIPIA 309 Query: 168 TGIAFANKYR-----------------RSDKI----------------CVVCF-GDGAAN 193 G+A++ Y+ +++ I VVCF GDG N Sbjct: 310 VGLAYSILYKNEFHYNPKNTSFTSTKNKNNYIQENENMIHMNNSQNVDVVVCFLGDGTTN 369 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ---TNFSKRGVSFNIPGMQVD 250 GQ +ES N+A+ +NL +I+VIENN +A+G SR+S+ N+SK G +FNI +VD Sbjct: 370 IGQFFESLNLASSYNLPIIFVIENNNWAIGMESSRSSSDDLMNNYSK-GKAFNIDTFKVD 428 Query: 251 GMDIRAVKATMDKAVAYCRAH-KGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHD 309 G D+ + K + R GPIIIE +TYR +GHS++DP R +EE + D Sbjct: 429 GNDVLTIYKLAKKKIQQIRNRTSGPIIIEAITYRAKGHSLADPDELRIKEEKTSWKK-RD 487 Query: 310 PIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 PI + + E ++++ N + ++ Sbjct: 488 PILFLSSYMKKYNLVQESYFEQVKKNTQTLL 518 >gi|284044226|ref|YP_003394566.1| dehydrogenase E1 component [Conexibacter woesei DSM 14684] gi|283948447|gb|ADB51191.1| dehydrogenase E1 component [Conexibacter woesei DSM 14684] Length = 317 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 106/303 (34%), Positives = 150/303 (49%), Gaps = 1/303 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M +R F+ + G + G H IGQEA+ GM SL + D +++ +R H Sbjct: 7 LDRYRWMARMREFDLACLEGVPTGEIHGELHTGIGQEAIAAGMAGSLRQDDALVSTHRNH 66 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 H LA GVD +MAE+ R G+ G GG MH F F GIVGA + + G A+ Sbjct: 67 SHALAKGVDPRALMAEIYERTTGLCGGYGGHMHPFDPARNF-SATGIVGASLPVALGYAY 125 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A D I V GD +N G +E NIAA W L ++ V+ENN+Y + S Sbjct: 126 AIAAEGRDAIAVAVTGDAGSNHGTFHECMNIAAAWELPLVVVVENNRYGISVSSEDVIPT 185 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 ++R +++ G VDG D AV T + VA RA P + E +R++GH DP Sbjct: 186 ATIAERAAAYDCIGETVDGTDAEAVAETFGRLVAETRAASAPCVFEATCFRFQGHYEGDP 245 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YRTR E ++R + DP+ R RL A+ +L I+ R+ + + + D Sbjct: 246 QIYRTRAEHEQIRRDGDPLLVARARLTAAAVATGDELDAIDTAAREEMQELLRSVREDPM 305 Query: 353 PDP 355 PDP Sbjct: 306 PDP 308 >gi|138894291|ref|YP_001124744.1| thiamine pyrophosphate-dependent dehydrogenases, E1component subunit alpha [Geobacillus thermodenitrificans NG80-2] gi|196248110|ref|ZP_03146812.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacillus sp. G11MC16] gi|134265804|gb|ABO65999.1| Thiamine pyrophosphate-dependent dehydrogenases, E1component alpha subunit [Geobacillus thermodenitrificans NG80-2] gi|196212894|gb|EDY07651.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacillus sp. G11MC16] Length = 328 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 116/326 (35%), Positives = 171/326 (52%), Gaps = 12/326 (3%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMS 98 K+ L Y +M IR +E+K + Y G G V G HL GQE VG+ + Sbjct: 5 KDHLLWMYEMMYKIRYYEDKMAEAYAEGKSPVFNIGAGPVPGEMHLATGQEPAAVGICVH 64 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L + D + +R H H +A GVD +++ AE+ G+ G+ KGKGG MH+F F G G Sbjct: 65 LKKEDTVTAPHRPHHHAIAKGVDLNRMTAEIFGKVTGLGKGKGGHMHLFDPDVKFSCG-G 123 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVGA + G A A K + D + V G+GAANQG +ES N+AALW L +I V+ENN Sbjct: 124 IVGAGIPHALGAALAAKKKGKDWVAVAFIGEGAANQGSFHESLNMAALWKLPLIVVVENN 183 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +Y + + ++A ++ R ++ I G V D + +AV R +GP IIE Sbjct: 184 EYGISVPKTASTAVSSNDVRAAAYGIQGYYVKDNDPIEMYNVSKEAVKRARNGEGPSIIE 243 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + TYRY GH DP YR + E+ +R DPI ++R RLL+ +E + ++E R Sbjct: 244 IETYRYLGHFQGDPELYRDKNEVTLLREK-DPIIRLRNRLLNEYGVTEETIAQLEGKARS 302 Query: 339 IINNSVEFAQSDKEPDPAELYSDILI 364 ++ + FA+ P P D+ + Sbjct: 303 EVDQAYAFARESDYPKPEAALEDVFV 328 >gi|297531080|ref|YP_003672355.1| pyruvate dehydrogenase (acetyl-transferring) [Geobacillus sp. C56-T3] gi|297254332|gb|ADI27778.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacillus sp. C56-T3] Length = 328 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 118/328 (35%), Positives = 168/328 (51%), Gaps = 12/328 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMK 96 +K+ L Y M IR +E+K + Y G G V G HL GQE GM Sbjct: 3 ISKDHLLWMYETMYKIRCYEDKMAEAYAEGKSPVFNIGAGPVPGEMHLATGQEPAAAGMC 62 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 + L + D + +R H H +A GVD +++ AE+ G+ G+ KGKGG MH+F F G Sbjct: 63 VHLKKEDTVTAPHRPHHHAIAKGVDLNRMTAEIFGKATGLGKGKGGHMHLFDPDVKFSCG 122 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 GIVGA + G A A K R +D + V G+GAANQG +ES N+AALW L I VIE Sbjct: 123 -GIVGAGIPHALGAALAAKKRGTDWVAVAFIGEGAANQGAFHESLNMAALWKLPFIVVIE 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQY + + ++A + R ++ I G V D + +AV R +GP I Sbjct: 182 NNQYGISVPKTASTAVPSNDVRAAAYGIKGYYVKDNDPIDMYNVSKEAVERARTGQGPSI 241 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 IE+ TYRY GH DP YR + E+ +R DPI ++R LL+ +E + ++E Sbjct: 242 IEIETYRYLGHFQGDPEVYRDKNEVTLLRQK-DPIIRLRNYLLNECGVTEETIAQLENKA 300 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDILI 364 ++ + FA+ P P E D+ + Sbjct: 301 TSEVDQAYAFAKESDYPKPEEALEDVFV 328 >gi|261418955|ref|YP_003252637.1| pyruvate dehydrogenase (acetyl-transferring) [Geobacillus sp. Y412MC61] gi|319765772|ref|YP_004131273.1| pyruvate dehydrogenase (acetyl-transferring) [Geobacillus sp. Y412MC52] gi|261375412|gb|ACX78155.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacillus sp. Y412MC61] gi|317110638|gb|ADU93130.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacillus sp. Y412MC52] Length = 328 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 118/328 (35%), Positives = 168/328 (51%), Gaps = 12/328 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMK 96 +K+ L Y M IR +E+K + Y G G V G HL GQE GM Sbjct: 3 ISKDHLLWMYETMYKIRCYEDKMAEAYAEGKSPVFNIGAGPVPGEMHLATGQEPAAAGMC 62 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 + L + D + +R H H +A GVD +++ AE+ G+ G+ KGKGG MH+F F G Sbjct: 63 VHLKKEDTVTAPHRPHHHAIAKGVDLNRMTAEIFGKATGLGKGKGGHMHLFDPDVKFSCG 122 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 GIVGA + G A A K R +D + V G+GAANQG +ES N+AALW L I VIE Sbjct: 123 -GIVGAGIPHALGAALAAKKRGTDWVAVAFIGEGAANQGAFHESLNMAALWKLPFIVVIE 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQY + + ++A + R ++ I G V D + +AV R +GP I Sbjct: 182 NNQYGISVPKTASTAVPSNDVRAAAYGIKGYYVKDNDPIDMYNVSKEAVERARTGQGPSI 241 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 IE+ TYRY GH DP YR + E+ +R DPI ++R LL+ +E + ++E Sbjct: 242 IEIETYRYLGHFQGDPEVYRDKNEVTLLRQK-DPIIRLRNYLLNECGVTEETIAQLENKA 300 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDILI 364 ++ + FA+ P P E D+ + Sbjct: 301 TSEVDQAYAFARESDYPKPEEALEDVFV 328 >gi|255311046|ref|ZP_05353616.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis 6276] gi|255317347|ref|ZP_05358593.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis 6276s] Length = 340 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 4/301 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLLIR FE + + Y G+VGGF H IGQEAV + ++YR HG L Sbjct: 37 MLLIREFEIRGEEAYLEGLVGGFYHSYIGQEAVATAAIACTGKDHWFFSSYRCHGVALLL 96 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 + ++ AEL G++ G + G+GGSMHM + GG GIVG Q+ L G AF+ KY+ Sbjct: 97 DIPLRQLAAELLGKETGCALGRGGSMHMCGDR--LPGGFGIVGGQIPLAAGAAFSMKYQN 154 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK- 237 S I + GDGA QG +E+ N AL +L ++ +IENN ++MGT++ RA A+ ++ Sbjct: 155 SSSISMCFIGDGAVAQGVFHETLNFVALHSLPLMLIIENNGWSMGTALHRAIAKQPIAES 214 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + +S+ + + ++G D+ +A Y + PII+E L R+RGHS+SDP YR+ Sbjct: 215 QAISYGLSSITLNGFDLFNSLIGFREAYHYMQQTGSPIIVEALCSRFRGHSISDPNLYRS 274 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 +EE+ + DPI ++ L+ SE D K++ + + +V A+ D EP A Sbjct: 275 KEEMQCLL-KRDPILFAKEWLIRANVLSEDDFKDLRQTSKTAVLEAVAQARLDPEPAVAT 333 Query: 358 L 358 L Sbjct: 334 L 334 >gi|89898336|ref|YP_515446.1| pyruvate dehydrogenase E1 alpha chain [Chlamydophila felis Fe/C-56] gi|89331708|dbj|BAE81301.1| pyruvate dehydrogenase E1 alpha chain [Chlamydophila felis Fe/C-56] Length = 341 Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 116/313 (37%), Positives = 165/313 (52%), Gaps = 4/313 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F + L + MLLIR FE + + Y G+ GGF H GQEAV + Sbjct: 26 FGAPRCLELLKQMLLIREFETRGEEAYLEGLAGGFYHSYSGQEAVATAALANTGLDQWFF 85 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 ++YR H + + + AEL G++ G + G+GGSMHM F GG GIVG Q+ L Sbjct: 86 SSYRCHALAILLNIPLRSLAAELLGKETGCALGRGGSMHMCGPN--FPGGFGIVGGQIPL 143 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G AFA KYR DKI + GDGA QG +E+ N A+L NL ++ +IENN + MGT++ Sbjct: 144 AAGAAFAIKYRGEDKISLGFIGDGAVAQGVFHETLNFASLHNLPLMLIIENNGWGMGTAL 203 Query: 227 SRASAQTNFSK-RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RA A+ + + +G S+ I ++G D+ A Y + PIIIE L R+R Sbjct: 204 KRAIAKLSIGESQGSSYGIRSFTLNGFDLFNCLTGFKDAYEYMLKTRRPIIIECLCSRFR 263 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS+SDP YR++EE+ + DPI V+ L+ SE + + + R + + Sbjct: 264 GHSISDPNLYRSKEEMQCL-IKKDPIIFVKNWLIRLGVLSEENFQAMRQECRSEVVKAFT 322 Query: 346 FAQSDKEPDPAEL 358 A+SD EP A L Sbjct: 323 EAKSDPEPTIATL 335 >gi|229492251|ref|ZP_04386059.1| dehydrogenase, E1 component [Rhodococcus erythropolis SK121] gi|229320877|gb|EEN86690.1| dehydrogenase, E1 component [Rhodococcus erythropolis SK121] Length = 726 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 113/329 (34%), Positives = 173/329 (52%), Gaps = 31/329 (9%) Query: 43 EVSEFNKEQELSAYRLM-------LLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 E++ NK+ + +A L+ +LIR FEE +L G G++ G H IGQE VG Sbjct: 15 ELATSNKDWDAAAPSLLATMLAQTILIRSFEEYVLELAGKGLIHGPAHSSIGQEGGAVGS 74 Query: 96 KMSLTEGDQMITAYREH--------GHILACGVDAS------------KIMAELTGRQGG 135 + LT D + ++R H H+ G+D + + +AE+ G G Sbjct: 75 IVGLTSADSINGSHRGHHQFLAKALAHVAVDGLDPTAELSPEVRTVLTRSLAEICGLSRG 134 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG 195 +G+GGSMH+ + G G + IVG V G A+A++ +D + V FGDGA N G Sbjct: 135 YCRGRGGSMHLQWKEAGAMGTNAIVGGGVPQAAGFAWAHRQAGTDAVAVTYFGDGAVNIG 194 Query: 196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIR 255 V ESFN+AA W+L + + IENNQYA+ T V+ A+ + S RG+ FNIP +VDGMD Sbjct: 195 SVLESFNLAAAWDLPICFFIENNQYAVSTHVAEATGEPRLSARGLGFNIPSWKVDGMDPL 254 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIE 312 AV M +A+ + R+ KGP IIE YR+ + P + YRT++E + DP+ Sbjct: 255 AVHLAMQEALTHMRSGKGPTIIEADVYRFFHQNGPFPGSAFGYRTKDEEKAWK-KRDPLR 313 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 + +++ K +E D+ E +++ Sbjct: 314 LLTDQVVRRKLLTEADVAEAVAQASRVMQ 342 >gi|221066549|ref|ZP_03542654.1| Pyruvate dehydrogenase (acetyl-transferring) [Comamonas testosteroni KF-1] gi|220711572|gb|EED66940.1| Pyruvate dehydrogenase (acetyl-transferring) [Comamonas testosteroni KF-1] Length = 327 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 105/277 (37%), Positives = 155/277 (55%), Gaps = 2/277 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ IR EEK L G + G HLCIGQEA+ G + GD++ + YR HG AC Sbjct: 23 MIRIRLLEEKIADLRKSGEIQGSVHLCIGQEAIYSGSCAARQPGDRVFSTYRGHGWAHAC 82 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GV A I+AEL R+ G+ G+GGS + + + GF+G + IVGA + G A A+ + Sbjct: 83 GVPAEAILAELLARETGVCAGRGGSAYFSAPEWGFFGENSIVGAGAPIACGAALASTMAK 142 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + + FGDGA NQG V+E+ N A+ L VI++ ENN YA T ++ KR Sbjct: 143 DGSLAITAFGDGAMNQGGVFEAMNFASYLKLPVIFLCENNTYAELTPIADTVRDAALFKR 202 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 +F + G+++DG DI V+ M+ R GP++IEM+T R GH + D +YRT Sbjct: 203 ARAFGMDGVRIDGNDILGVRQCMEHFGQKVRNGHGPVLIEMMTQRLVGHYIGDMQSYRTA 262 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 EI E + H+PI ++ +R L S+ +++ I +N Sbjct: 263 REIAEAKL-HEPIVRLGQR-LQLSGVSDAEVQNIHLN 297 >gi|254444295|ref|ZP_05057771.1| Dehydrogenase E1 component superfamily [Verrucomicrobiae bacterium DG1235] gi|198258603|gb|EDY82911.1| Dehydrogenase E1 component superfamily [Verrucomicrobiae bacterium DG1235] Length = 347 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 110/327 (33%), Positives = 174/327 (53%), Gaps = 12/327 (3%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 E + ++E +S L++LIR+ EEK G + CHL IGQEA +G+ + Sbjct: 21 EPINLKNQSRESLISNLELLVLIRKAEEKIADNVENGRIKCPCHLAIGQEAPAIGIAAHI 80 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +GD + A+R H H LA G D ++ AE+ G++ G SKG GGSMH+ S KN YG I Sbjct: 81 QKGDAVFGAHRSHAHYLALGGDLRELFAEILGKETGCSKGMGGSMHLRSLKNQLYGTVPI 140 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGA + + TG A A+K +D I V GDGA +G ++ES N+A+ NL VIYV+ENN Sbjct: 141 VGATIPIATGAALAHKLDGNDSIAVSFLGDGAVEEGVLHESLNLASTMNLPVIYVVENNL 200 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A + + + + NI ++DG D + T A+ R++ GP IE Sbjct: 201 FASHLHIGLRQPNDSTCRFAEAHNIKWSRIDGNDTVKLIETTGTAINCARSNGGPHFIEA 260 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSN-------HDPIEQVRKRLLHNKWASEGDLKEI 332 +TYR+RGH +R ++ RS+ DPI+++ + L + ++ +L Sbjct: 261 VTYRWRGH-----VGHREDNDVGVKRSDDLEGWKKRDPIDRLARALFDDGAYTQNELDTA 315 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELY 359 ++ + + I + + A+ D+ P EL+ Sbjct: 316 KLEIDRKIEAAWQQAEEDRYPLKGELF 342 >gi|56419245|ref|YP_146563.1| thiamine pyrophosphate-dependent dehydrogenase, E1 component subunit alpha [Geobacillus kaustophilus HTA426] gi|56379087|dbj|BAD74995.1| thiamine pyrophosphate-dependent dehydrogenases, E1 component alpha subunit [Geobacillus kaustophilus HTA426] Length = 328 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 118/327 (36%), Positives = 168/327 (51%), Gaps = 12/327 (3%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKM 97 +K+ L Y M IR +E+K + Y G G V G HL GQE GM + Sbjct: 4 SKDHLLWMYETMYKIRCYEDKMAEAYAEGKSPVFNIGAGPVPGEMHLATGQEPAAAGMCV 63 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 L + D + +R H H +A GVD +++ AE+ G+ G+ KGKGG MH+F F G Sbjct: 64 HLKKEDTVTAPHRPHHHAIAKGVDLNRMTAEIFGKATGLGKGKGGHMHLFDPDVKFSCG- 122 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GIVGA + G A A K R +D + V G+GAANQG +ES N+AALW L I VIEN Sbjct: 123 GIVGAGIPHALGAALAAKKRGTDWVAVAFIGEGAANQGAFHESLNMAALWKLPFIVVIEN 182 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 NQY + + ++A + R ++ I G V D + +AV R +GP II Sbjct: 183 NQYGISVPKTASTAVPSNDVRAAAYGIKGYYVKDNDPIDMYNVSKEAVERARTGQGPSII 242 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E+ TYRY GH DP YR + E+ +R DPI ++R LL+ +E + ++E Sbjct: 243 EIETYRYLGHFQGDPEVYRDKNEVTLLRQK-DPIIRLRNYLLNECGVTEETIAQLENKAT 301 Query: 338 KIINNSVEFAQSDKEPDPAELYSDILI 364 ++ + FA+ P P E D+ + Sbjct: 302 FEVDQAYAFARESDYPKPEEALEDVFV 328 >gi|289937518|ref|YP_003482120.1| Pyruvate dehydrogenase (acetyl-transferring) [Natrialba magadii ATCC 43099] gi|289533209|gb|ADD07558.1| Pyruvate dehydrogenase (acetyl-transferring) [Natrialba magadii ATCC 43099] Length = 351 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 109/326 (33%), Positives = 168/326 (51%), Gaps = 15/326 (4%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKM 97 K QE+ YR+M+ R +EE+ + Y G + G HL G EA G+ Sbjct: 5 TKLQEM--YRVMVTARYYEERLQEEYLEGKQPAFDISAGPIPGELHLAAGHEASAAGVCQ 62 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 L + D + +R H +A GVD ++ AE+ GR+ G+S GKGG MH+F F Sbjct: 63 HLRDDDTVTAPHRPHHIAIAKGVDLDRMTAEIFGRETGLSNGKGGHMHLFDPAVNF-ACS 121 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GI+ G A K R D + V G+GA +QG ES N+AA+ NL V++VIE+ Sbjct: 122 GIIAEGCPPAVGAGLAAKKRNEDSVAVAFIGEGAVSQGAFLESLNLAAVQNLPVVFVIED 181 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N +A+ R + + S+R F++PG +VD D AV A +AV R GP ++ Sbjct: 182 NDWAISMPKDRVTDVEDASQRAGGFDLPGKRVDSDDATAVYAAAKEAVGRARDDNGPSLL 241 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E+ +R GH M DP +YR E+ +E N D IE++ L + +L+EI Sbjct: 242 ELQVHRRMGHFMGDPESYRPAED-SEAAKNRDSIERLAAE-LRAAGVEDAELEEIRDEAH 299 Query: 338 KIINNSVEFAQSDKEPDPAELYSDIL 363 + +++++E+A+ +PDP + Y D+ Sbjct: 300 ERVDSAIEWAKEQPQPDPEDAYEDVF 325 >gi|255646359|gb|ACU23659.1| unknown [Glycine max] Length = 317 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 102/257 (39%), Positives = 149/257 (57%), Gaps = 10/257 (3%) Query: 16 ALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGM 75 AL + RA++S V V LE K + L Y M+L R FE+K ++Y Sbjct: 54 ALAKPHAHTRASSSPVAAV---LLERTSNLLVTKGEGLELYEDMILGRFFEDKCAEMYYR 110 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 G + GF HL GQEAV G L + D +++ YR+H H L+ GV + ++M+EL G+ G Sbjct: 111 GKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPSREVMSELFGKATG 170 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS-------DKICVVCFG 188 +G+GGSMHMFS ++ GG +G + + TG AF++KYRR D + + FG Sbjct: 171 CCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFSSKYRREVLKQADCDHVTLAFFG 230 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ 248 DG N GQ YE N+AALW L +++V+ENN +A+G S RA++ K+G +F +PG+ Sbjct: 231 DGTCNNGQFYECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIWKKGPAFGMPGVH 290 Query: 249 VDGMDIRAVKATMDKAV 265 VDGMD+ V+ +AV Sbjct: 291 VDGMDVLQVREVAKEAV 307 >gi|329942829|ref|ZP_08291608.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Chlamydophila psittaci Cal10] gi|332287422|ref|YP_004422323.1| pyruvate dehydrogenase subunit alpha [Chlamydophila psittaci 6BC] gi|313848002|emb|CBY16999.1| pyruvate dehydrogenase e1 component, alpha subunit [Chlamydophila psittaci RD1] gi|325507032|gb|ADZ18670.1| pyruvate dehydrogenase subunit alpha [Chlamydophila psittaci 6BC] gi|328815089|gb|EGF85078.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Chlamydophila psittaci Cal10] gi|328914670|gb|AEB55503.1| pyruvate dehydrogenase, E1 component, alpha subunit [Chlamydophila psittaci 6BC] Length = 341 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 112/303 (36%), Positives = 164/303 (54%), Gaps = 4/303 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 + MLLIR FE + + Y G+VGGF H GQEAV + ++YR H + Sbjct: 36 KYMLLIREFETRGEEAYLEGLVGGFYHSYSGQEAVATAALANTGLDQWFFSSYRCHALAI 95 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 + + AEL G++ G + G+GGSMHM F GG GIVG Q+ L G AFA KY Sbjct: 96 LLNIPLRSLAAELLGKETGCALGRGGSMHMCGPN--FPGGFGIVGGQIPLAAGAAFAIKY 153 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R DKI + GDGA QG +E+ N AL NL ++ +IENN + MGT+++RA A+ Sbjct: 154 RCEDKISLGFIGDGAVAQGVFHETLNFTALHNLPLMLIIENNGWGMGTALNRAIAKQPIG 213 Query: 237 K-RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + +G S+ I ++G D+ +A Y + + P+I+E L R+RGHS+SDP Y Sbjct: 214 ESQGASYGIRSFTLNGFDLFNCLLGFKEAYEYMQKTRLPVIVECLCSRFRGHSISDPNLY 273 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R++EE+ + DPI +K L++ SE + + + + + A+SD EP Sbjct: 274 RSKEEM-QCLIKKDPIMFAKKWLINLGVISEESFQALREECKNEVLKAFTEAKSDPEPTI 332 Query: 356 AEL 358 A L Sbjct: 333 ATL 335 >gi|302526135|ref|ZP_07278477.1| pyruvate dehydrogenase E1 component alpha subunit [Streptomyces sp. AA4] gi|302435030|gb|EFL06846.1| pyruvate dehydrogenase E1 component alpha subunit [Streptomyces sp. AA4] Length = 315 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 121/309 (39%), Positives = 170/309 (55%), Gaps = 15/309 (4%) Query: 52 ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 +L YR M LIR+FE A +L G + GF HL IGQEAV G+ +L D + T +R Sbjct: 2 KLRLYRTMSLIRQFETAASRLMASGELAGFLHLSIGQEAVAAGVCDALDRDDYLTTTHRG 61 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 HGH LA G + ++MAEL R GG G+ GSMH+ G G + IVGA V + G A Sbjct: 62 HGHCLAKGANVRQMMAELFARAGGYCGGRSGSMHVADPALGILGANAIVGAGVPIALGGA 121 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS---R 228 F+ + +I V FG+GA +G V+ESFNIAAL L +++V ENN YA T V R Sbjct: 122 FSAQVLGDARIAVTFFGEGAVAEGVVHESFNIAALSKLPIVFVCENNGYAEMTPVETHLR 181 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 A++ T +++ +P VDG D+ AV+ +AV RA +GP ++E TYR+ GH Sbjct: 182 AASVTEYAR---PHRMPAESVDGNDVLAVRDAARRAVERARAGEGPTLLECRTYRWHGHF 238 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD-LKEIEMNVRKIINNSVEFA 347 D YR EE+++ R+ DP+ +R L GD L I+ + +++ +A Sbjct: 239 EGDAQGYRNAEEVDQWRTR-DPLLVLRAHL-----DGTGDQLDAIDRACADEVADAIAWA 292 Query: 348 --QSDKEPD 354 Q D PD Sbjct: 293 RVQPDASPD 301 >gi|284042501|ref|YP_003392841.1| pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] gi|283946722|gb|ADB49466.1| Pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] Length = 329 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 117/314 (37%), Positives = 172/314 (54%), Gaps = 2/314 (0%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E++L R ML IR FE+ +L+ G+V G HLC GQE + VG +L D+M Y Sbjct: 17 EEQLDWLRTMLEIRFFEDHCHRLFARGLVRGSTHLCQGQEGIEVGACRALRVTDKMACTY 76 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R HG +LA G + E+ G+ G+ GKGGSMH+ G G IVGA + + G Sbjct: 77 RGHGAVLAKGAPLDRSFGEILGKGEGLCGGKGGSMHLTDLSVGAIGSFAIVGAHLPIVLG 136 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 AFA +Y D++ + FGDG+ N G +E+ N+AA+W L I+V ENN Y + ++ Sbjct: 137 TAFAAQYEERDEVSLCFFGDGSTNIGGFHEALNMAAVWKLPAIFVCENNLYGEYSPLALT 196 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + R S+ +PG+Q+DG DI T+ +AVA RA +GP +IE LTYR +GHS Sbjct: 197 TPIERLADRAASYGMPGVQIDGNDIGVAYETVAEAVARARAGEGPTLIEALTYRQKGHSR 256 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA+YR E+ E DPI + + L+ + E+ + ++ ++E A S Sbjct: 257 SDPASYRPEGEL-ERWLERDPITLLERALIDGG-IEQARCDELRETAERTVDEALERAMS 314 Query: 350 DKEPDPAELYSDIL 363 +P P D+L Sbjct: 315 WPDPRPESRLEDVL 328 >gi|311742878|ref|ZP_07716686.1| 3-methyl-2-oxobutanoate dehydrogenase [Aeromicrobium marinum DSM 15272] gi|311313558|gb|EFQ83467.1| 3-methyl-2-oxobutanoate dehydrogenase [Aeromicrobium marinum DSM 15272] Length = 725 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 118/317 (37%), Positives = 166/317 (52%), Gaps = 27/317 (8%) Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH--------G 113 IR FEE +L G G++ G H +GQE VG + L D + ++R H G Sbjct: 41 IRSFEEYVLELAGQGLIHGPAHSSVGQEGGAVGSVLPLRSDDFVNGSHRGHHQFLAKAFG 100 Query: 114 HIL---ACGVDA---------SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 H+L + G+ K +AE+ G GG +G+GGSMH+ + G G + IVG Sbjct: 101 HVLEPKSSGLPEITTEVREVLHKTLAEICGLAGGYCRGRGGSMHLQWREAGAMGTNAIVG 160 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 V G A+ + SD + V FGDGA N G V E+FN+AA W L V++ IENNQYA Sbjct: 161 GGVPQAAGFAWNMLHSGSDAVSVTYFGDGAVNIGSVLETFNLAAAWKLPVMFFIENNQYA 220 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T V+RA+ + S RG F IP +VDGMD AV M +AVA+ RA GP IIE Sbjct: 221 VSTPVARATGEPRLSGRGPGFGIPSWRVDGMDALAVHTAMTEAVAHMRAGLGPTIIEADL 280 Query: 282 YRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 YR+ + + P + YR +EE R DPI Q+R+R++ + A+E D+ + ++ Sbjct: 281 YRFFHQNGAFPGSAFGYRGKEEEASWR-ERDPIAQLRRRVIARELATEADIDAMTNSIDT 339 Query: 339 IINNSVEFAQSDKEPDP 355 + E EP P Sbjct: 340 TMK---EIGDELLEPVP 353 >gi|166154456|ref|YP_001654574.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis 434/Bu] gi|166155331|ref|YP_001653586.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335715|ref|ZP_07223959.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis L2tet1] gi|165930444|emb|CAP03937.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis 434/Bu] gi|165931319|emb|CAP06891.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 340 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 109/301 (36%), Positives = 167/301 (55%), Gaps = 4/301 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLLIR FE + + Y G+VGGF H IGQEAV + ++YR HG L Sbjct: 37 MLLIREFEIRGEEAYLEGLVGGFYHSYIGQEAVATAAIACTGKDHWFFSSYRCHGVALLL 96 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 + ++ AEL G++ G + G+GGSMHM + GG GIVG Q+ L G AF+ KY+ Sbjct: 97 DIPLRQLAAELLGKETGCALGRGGSMHMCGDR--LPGGFGIVGGQIPLAAGAAFSMKYQN 154 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK- 237 S I + GDGA QG +E+ N AL +L ++ +IENN ++MGT++ RA A+ ++ Sbjct: 155 SSSISMCFIGDGAVAQGVFHETLNFVALHSLPLMLIIENNGWSMGTALHRAIAKQPIAES 214 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + +S+ + + ++G D+ +A + + PII+E L R+RGHS+SDP YR+ Sbjct: 215 QAISYGLSSITLNGFDLFNSLIGFREAYHHMQQTGSPIIVEALCSRFRGHSISDPNLYRS 274 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 +EE+ + DPI ++ L+ SE D K++ + + +V A+ D EP A Sbjct: 275 KEEMQCLL-KRDPILFAKEWLIRANVLSEDDFKDLRQTSKTAVLEAVAQARLDPEPAVAT 333 Query: 358 L 358 L Sbjct: 334 L 334 >gi|330444492|ref|YP_004377478.1| pyruvate dehydrogenase, E1 component subunit alpha [Chlamydophila pecorum E58] gi|328807602|gb|AEB41775.1| pyruvate dehydrogenase, E1 component, alpha subunit [Chlamydophila pecorum E58] Length = 362 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 109/314 (34%), Positives = 169/314 (53%), Gaps = 6/314 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + F E + + M+LIR FE + + Y G+VGGF H GQEAV +L Sbjct: 44 LESFGSEVCIQLLKQMILIREFETRGEEAYFEGLVGGFYHSYAGQEAVATAAIANLGTEQ 103 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++YR H + + ++ EL G++ G + G+GGSMHM + F GG GIVG Q Sbjct: 104 WYYSSYRCHALAILLNIPLEQLAGELLGKEVGCAHGRGGSMHMCGPR--FPGGFGIVGGQ 161 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + L G AFA KYR K+ + G+GA QG +E+ N ++L +L ++ +IENN + MG Sbjct: 162 IPLAAGTAFALKYRDEHKVSLCFIGEGAVAQGVFHETLNFSSLQSLPLMLIIENNGWGMG 221 Query: 224 TSVSRASAQTNFSK-RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T+ RA A+ + +G S+NI ++G+D+ +A AY + K P+I+E L Sbjct: 222 TAQHRALAKFPIGESQGASYNIRTFTLNGLDLFNCLLGFKEAYAYMLSSKRPVIVECLCS 281 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+RGHS+SDP YRT+EE+ ++ DPI + L +E +++ R I Sbjct: 282 RFRGHSISDPNLYRTKEEMQKLYQK-DPILFAKSWLEKLNVLTEEQFQQLRKECRDSIIE 340 Query: 343 SVEFAQSDKEPDPA 356 + F ++ PDP+ Sbjct: 341 A--FTKAKSSPDPS 352 >gi|15604966|ref|NP_219750.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis D/UW-3/CX] gi|76788967|ref|YP_328053.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis A/HAR-13] gi|237802668|ref|YP_002887862.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis B/Jali20/OT] gi|237804590|ref|YP_002888744.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis B/TZ1A828/OT] gi|3328655|gb|AAC67838.1| Pyruvate Dehydrogenase Alpha [Chlamydia trachomatis D/UW-3/CX] gi|76167497|gb|AAX50505.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis A/HAR-13] gi|231272890|emb|CAX09801.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis B/TZ1A828/OT] gi|231273902|emb|CAX10694.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis B/Jali20/OT] gi|296435761|gb|ADH17935.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis G/9768] gi|296437621|gb|ADH19782.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis G/11074] gi|297140120|gb|ADH96878.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis G/9301] gi|297748375|gb|ADI50921.1| Pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis D-EC] gi|297749255|gb|ADI51933.1| Pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis D-LC] Length = 340 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 109/301 (36%), Positives = 167/301 (55%), Gaps = 4/301 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLLIR FE + + Y G+VGGF H IGQEAV + ++YR HG L Sbjct: 37 MLLIREFEIRGEEAYLEGLVGGFYHSYIGQEAVATAAIACTGKDHWFFSSYRCHGVALLL 96 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 + ++ AEL G++ G + G+GGSMHM + GG GIVG Q+ L G AF+ KY+ Sbjct: 97 DIPLRQLAAELLGKETGCALGRGGSMHMCGDR--LPGGFGIVGGQIPLAAGAAFSMKYQN 154 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK- 237 S I + GDGA QG +E+ N AL +L ++ +IENN ++MGT++ RA A+ ++ Sbjct: 155 SSSISMCFIGDGAVAQGVFHETLNFVALHSLPLMLIIENNGWSMGTALHRAIAKQPIAES 214 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + +S+ + + ++G D+ +A + + PII+E L R+RGHS+SDP YR+ Sbjct: 215 QAISYGLSSITLNGFDLFNSLIGFREAYHHMQQTGSPIIVEALCSRFRGHSISDPNLYRS 274 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 +EE+ + DPI ++ L+ SE D K++ + + +V A+ D EP A Sbjct: 275 KEEMQCLL-KRDPILFAKEWLIRANVLSEDDFKDLRQTSKTAVLEAVAQARLDPEPAVAT 333 Query: 358 L 358 L Sbjct: 334 L 334 >gi|255348604|ref|ZP_05380611.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis 70] gi|255503144|ref|ZP_05381534.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis 70s] gi|255506822|ref|ZP_05382461.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis D(s)2923] gi|289525284|emb|CBJ14760.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis Sweden2] gi|296434833|gb|ADH17011.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis E/150] gi|296438553|gb|ADH20706.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis E/11023] Length = 340 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 109/301 (36%), Positives = 167/301 (55%), Gaps = 4/301 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLLIR FE + + Y G+VGGF H IGQEAV + ++YR HG L Sbjct: 37 MLLIREFEIRGEEAYLEGLVGGFYHSYIGQEAVATAAIACTGKDHWFFSSYRCHGVALLL 96 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 + ++ AEL G++ G + G+GGSMHM + GG GIVG Q+ L G AF+ KY+ Sbjct: 97 DIPLRQLAAELLGKETGCALGRGGSMHMCGDR--LPGGFGIVGGQIPLAAGAAFSMKYQN 154 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK- 237 S I + GDGA QG +E+ N AL +L ++ +IENN ++MGT++ RA A+ ++ Sbjct: 155 SSSISMCFIGDGAVAQGVFHETLNFVALHSLPLMLIIENNGWSMGTALHRAIAKQPIAES 214 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + +S+ + + ++G D+ +A + + PII+E L R+RGHS+SDP YR+ Sbjct: 215 QAISYGLSSITLNGFDLFNSLIGFREAYHHMQQTGSPIIVEALCSRFRGHSISDPNLYRS 274 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 +EE+ + DPI ++ L+ SE D K++ + + +V A+ D EP A Sbjct: 275 KEEMQCLL-KRDPILFAKEWLIRANVLSEDDFKDLRQTSKTAVLEAVAQARLDPEPAVAT 333 Query: 358 L 358 L Sbjct: 334 L 334 >gi|319763026|ref|YP_004126963.1| pyruvate dehydrogenase (acetyl-transferring) [Alicycliphilus denitrificans BC] gi|330825106|ref|YP_004388409.1| pyruvate dehydrogenase [Alicycliphilus denitrificans K601] gi|317117587|gb|ADV00076.1| Pyruvate dehydrogenase (acetyl-transferring) [Alicycliphilus denitrificans BC] gi|329310478|gb|AEB84893.1| Pyruvate dehydrogenase (acetyl-transferring) [Alicycliphilus denitrificans K601] Length = 335 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 111/325 (34%), Positives = 167/325 (51%), Gaps = 19/325 (5%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLY-----------------GMGMVGGFCHLCIGQEA 90 + E++L Y M+ IR +EE ++Y G G V G HL GQE Sbjct: 4 STERKLWMYEKMIEIREYEETMARVYMEGKLPPHIQKGLAFDIGSGPVPGEMHLAAGQEP 63 Query: 91 VIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK 150 V VG+ L + D ++ ++R H +A GV + + AE+ G+ G+ +GKGG MH+F Sbjct: 64 VAVGVCAHLHDDDTVVGSHRPHHFAIAKGVPLNSMTAEMFGKDTGLGRGKGGHMHLFDPA 123 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 + F GI+GA + G A A K R D + V FG+GA NQG +ES N+AALW L Sbjct: 124 HKF-SCSGIIGASMPPACGAALAAKKRGKDWVAVAFFGEGATNQGAFHESMNLAALWKLP 182 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 V++V E+N+YA+ S +++ + R ++ +PG+ VD D AV AV R Sbjct: 183 VLFVCEDNKYAISVEKSESTSVAWNADRAAAYGMPGVLVDQNDALAVYEAAGVAVERARR 242 Query: 271 HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 +GP +IE+ T RY GH DP YR + E E+R N DPI ++ + L + + + Sbjct: 243 GEGPTLIEVKTDRYLGHFQGDPETYRPKGEAAELRKN-DPIPRLAEHLRRSGLLDDAADQ 301 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDP 355 + V I + E+ +S P P Sbjct: 302 ALRQRVSARIAEAYEYGRSSPYPKP 326 >gi|284045385|ref|YP_003395725.1| pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] gi|283949606|gb|ADB52350.1| Pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] Length = 327 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 116/308 (37%), Positives = 164/308 (53%), Gaps = 10/308 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L R M IR FEE+ + + G + GF H+ IGQEAV G+ SL D + T +R H Sbjct: 18 LGDVRTMARIRAFEERVSRAFKDGRIPGFVHVSIGQEAVAAGVCGSLERRDMITTTHRGH 77 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH LA G DA +MAEL GR G GKGGSMH+ T G G +GIVGA + + G A Sbjct: 78 GHCLAKGADAGAMMAELFGRASGTCGGKGGSMHIADTALGVLGANGIVGAGIPIAVGAAL 137 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + R + + V G+G + G +E+ +A LW V++VIENN++A T Sbjct: 138 AARIRGTGAVAVAFAGEGTVHSGAFHEALTLAVLWEAPVVFVIENNRFAEFTDSEAMWRG 197 Query: 233 TNFSKRGVSFNIPGMQ-VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +R + + + + VDG D AV+A A+ CRA GP ++E +TYR+ GH D Sbjct: 198 APLLERALGYGLAAAERVDGNDAVAVRAAAGGAIEACRAGGGPRLLEAMTYRHHGHYEGD 257 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE---MNVRKIINNSVEFAQ 348 PA YR E DP+ QV +R+L ASEG +E++ + ++ +V A Sbjct: 258 PAAYRDEAETAAWLER-DPL-QVARRVL----ASEGRAEEVDALRAAAEQEMDRAVADAL 311 Query: 349 SDKEPDPA 356 + P+PA Sbjct: 312 AAPSPEPA 319 >gi|16755641|gb|AAL28054.1|AF406785_3 pyruvate dehydrogenase E1 alpha subunit [Antonospora locustae] Length = 342 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 126/320 (39%), Positives = 191/320 (59%), Gaps = 24/320 (7%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR ML +R +E ++Y G++ GFCHL IGQE V + + D+ I +YR H Sbjct: 33 YRKMLCMRYMDESISKMYSRGLIRGFCHLDIGQEEVYAAL-CHVARNDKFIGSYRCHALA 91 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A + +I+ EL GR GG++KGKGGSMH+++ + +GGHGIVGAQV LG G+A+A K Sbjct: 92 VAAEIPVREIVGELLGRAGGVAKGKGGSMHLYN--DLLFGGHGIVGAQVPLGCGMAYALK 149 Query: 176 YRR--------SDKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 Y + K V CF GDGA+NQGQ++ESFN+A +WNL +++V+ NN Y+M T V Sbjct: 150 YNEGLEDVRDTTSKAVVFCFYGDGASNQGQIHESFNVAKIWNLPIVFVVVNNAYSMWTCV 209 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYR 283 + A A +F KR F +PG++V G I AV ++ + R H KGP+I+++ TYR Sbjct: 210 ADACANDDFYKRA-DF-LPGLRVLGRSIFAVTRCLEVS----REHALQKGPLIVQIDTYR 263 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS +D YR E+ R + + L+ ++ +E + I+ +VR + + Sbjct: 264 LCGHSTTDGIVYRDETEVRRERER-NALGHTESALV-QRFGAE-HIAAIKADVRSHVAHE 320 Query: 344 VEFAQSDKEPDPAELYSDIL 363 V+ A + EP+P EL+ D++ Sbjct: 321 VDVALAMLEPEPTELFRDVV 340 >gi|296436685|gb|ADH18855.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia trachomatis G/11222] Length = 340 Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 108/299 (36%), Positives = 168/299 (56%), Gaps = 6/299 (2%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLLIR FE + + Y G+VGGF H IGQEAV + ++YR HG L Sbjct: 37 MLLIREFEIRGEEAYLEGLVGGFYHSYIGQEAVATAAIACTGKDHWFFSSYRCHGVALLL 96 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 + ++ AEL G++ G + G+GGSMHM + GG GIVG Q+ L G AF+ KY+ Sbjct: 97 DIPLRQLAAELLGKETGCALGRGGSMHMCGDR--LPGGFGIVGGQIPLAAGAAFSMKYQN 154 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK- 237 S I + GDGA QG +E+ N AL +L ++ +IENN ++MGT++ RA A+ ++ Sbjct: 155 SSSISMCFIGDGAVAQGVFHETLNFVALHSLPLMLIIENNGWSMGTALHRAIAKQPIAES 214 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + +S+ + + ++G D+ +A + + PII+E L R+RGHS+SDP YR+ Sbjct: 215 QAISYGLSSITLNGFDLFNSLIGFREAYHHMQQTGSPIIVEALCSRFRGHSISDPNLYRS 274 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 +EE+ + DPI ++ L+ SE D K++ + + +V AQ+ +P+PA Sbjct: 275 KEEMQCLL-KRDPILFAKEWLIRANVLSEDDFKDLRQTSKTAVLEAV--AQASLDPEPA 330 >gi|162148287|ref|YP_001602748.1| 2-oxoglutarate dehydrogenase E1 component beta subunit [Gluconacetobacter diazotrophicus PAl 5] gi|161786864|emb|CAP56447.1| putative 2-oxoglutarate dehydrogenase E1 component beta subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 311 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 108/310 (34%), Positives = 166/310 (53%), Gaps = 6/310 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + A R M+LIR FEE G F L G+EAV VG+ +L GDQ++T R Sbjct: 7 IEALRDMMLIRAFEEALSARKDHG----FQLLSSGEEAVAVGLASALEAGDQLLTGGRSI 62 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ILA GV ++MAEL GR GG+++G+ G HM + +GF+G H +VG +S+ G+A Sbjct: 63 GPILARGVAPERVMAELLGRTGGMNRGRAGRGHMSAPDDGFFGAHAVVGGNISIAAGVAL 122 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + + I V+ FGDGA G ++E+ N+AALW L +++V NNQ ++ T+ A A Sbjct: 123 ARQMDGTGGIVVILFGDGACGAGALHETLNMAALWKLPLLFVCNNNQLSVSTAREAALAV 182 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 S G +F + +DG+D+ V AT +AV + R +GP +E + R R HS + Sbjct: 183 PRLSDLGATFGLWARTIDGLDVGLVAATAAEAVRHVRDGRGPAFLECTSIRLRSHSTT-A 241 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 R+R E+ +R+ H PIE+ L DL+ ++ ++ +A + Sbjct: 242 RETRSRPELTALRT-HCPIERTITALRAEGILGAADLERMQQQATSRAAQALAYADASPY 300 Query: 353 PDPAELYSDI 362 PD E+ + Sbjct: 301 PDAEEVLHHV 310 >gi|163792643|ref|ZP_02186620.1| Thiamine pyrophosphate-dependent dehydrogenase, E1 component alpha subunit [alpha proteobacterium BAL199] gi|159182348|gb|EDP66857.1| Thiamine pyrophosphate-dependent dehydrogenase, E1 component alpha subunit [alpha proteobacterium BAL199] Length = 334 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 104/272 (38%), Positives = 150/272 (55%), Gaps = 1/272 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + ++ LS +RLM IR FEE A Q +V G H IGQE + VG+ +L D + Sbjct: 10 LDVDRLLSHHRLMWRIRAFEEAALQANTEKLVLGAIHPSIGQEGIAVGVCSNLNRDDILS 69 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH LA G DA +M EL GR+GG S GKGGSMH+ G G +G+V A + + Sbjct: 70 STHRGHGHTLAKGADAGAMMRELLGREGGTSHGKGGSMHIADFTVGMLGANGVVAANIHI 129 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A A K R +++ FGDGA N+G E N A ++ L ++V E+N +A T Sbjct: 130 TAGAAHAIKLRGENRVACSIFGDGAINRGPFLEGLNWAKVFELPALFVCEDNGFASTTRT 189 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + + + R + +P ++VDG D+ AV +AV RA GP I TYR G Sbjct: 190 AAMTGGPGPAARAEALGVPAVEVDGNDVLAVDEATREAVVAIRAGGGPRFIVAKTYRLTG 249 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ SDPA YR ++E++ + DPI ++ + L Sbjct: 250 HTASDPAAYRPKDEVDAAWRD-DPIARLAQTL 280 >gi|332286045|ref|YP_004417956.1| 2-oxoisovalerate dehydrogenase beta subunit [Pusillimonas sp. T7-7] gi|330429998|gb|AEC21332.1| 2-oxoisovalerate dehydrogenase beta subunit [Pusillimonas sp. T7-7] Length = 733 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 114/317 (35%), Positives = 168/317 (52%), Gaps = 25/317 (7%) Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH-------- 112 LIR FEE +L G+V G H IGQE G +SLT DQ+ ++R H Sbjct: 40 LIRAFEETVVELAMEGLVHGPAHSSIGQEGGAAGSIVSLTTADQVNGSHRGHHQFLSKAL 99 Query: 113 GHILACGVDA------------SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 H+ G+D + +AE+ G G +G+GGSMH+ + G G + IV Sbjct: 100 AHVTPGGIDPKLEPNADIDTLLQRTLAEIMGLAQGFCRGRGGSMHLRWDEAGVLGTNAIV 159 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 G V L G A+A+K +D + V FGDGA N G V E+ N+AA W L + + IENN+Y Sbjct: 160 GGGVPLAAGAAWAHKQAGTDAVAVTYFGDGAVNIGSVLETMNLAAAWKLPLCFFIENNRY 219 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ T V A+A+ S RG +FNIP +VDGMD AV M++A+ + RA GP IIE Sbjct: 220 AVSTHVEEATAEPRLSARGQAFNIPSWKVDGMDPLAVHMAMEQALQHMRAGNGPTIIEAD 279 Query: 281 TYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 YRY + P + YRT+EE R DP++ + +++ K S +++ + ++ Sbjct: 280 VYRYFHQNGGFPGSAFGYRTKEEEQAWR-QRDPLDALGNQMIARKLISSKEIEVLRQRMQ 338 Query: 338 KIINNSVEFAQSDKEPD 354 + +V A ++ +PD Sbjct: 339 ASMKKAVA-ALTEADPD 354 >gi|284044201|ref|YP_003394541.1| dehydrogenase E1 component [Conexibacter woesei DSM 14684] gi|283948422|gb|ADB51166.1| dehydrogenase E1 component [Conexibacter woesei DSM 14684] Length = 518 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 112/298 (37%), Positives = 161/298 (54%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M LIR FEE+A L G + G H GQEAV +G +L D + + +R H H LA Sbjct: 204 MALIRVFEERAAPLARAGKIPGGMHSAAGQEAVAIGAVRALAPSDIVTSTHRSHHHSLAK 263 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ ++IMAEL G+ GG+ G+ G +H+ G +G +GIVGA + + TG A K R Sbjct: 264 GLQPAEIMAELYGKAGGLLGGRAGHLHLADFSLGLFGSNGIVGAGLGIATGAAVGAKLRG 323 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 D++ V FGDG AN G+ +E+ N+AA W L +I + ENN YA+ T ++ A+ T + R Sbjct: 324 RDQVAVGFFGDGGANTGRTWENVNLAASWQLPLIAICENNLYAVETHLAAAAPNTTIADR 383 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 F + +QVDG D+ AV + +A GP +E LTYRY GH++ DP YR Sbjct: 384 AAGFGLHSVQVDGQDVVAVHDVVAEARERALGGGGPTFVEALTYRYSGHTVDDPETYREA 443 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 E+ R DP+ + + L G L + + ++EFA+S PDPA Sbjct: 444 GEVELWRRARDPLLRAARALEAAGALEVGGLDAVLARAEATVAAAIEFAESSPWPDPA 501 >gi|224824303|ref|ZP_03697411.1| Pyruvate dehydrogenase (acetyl-transferring) [Lutiella nitroferrum 2002] gi|224603722|gb|EEG09897.1| Pyruvate dehydrogenase (acetyl-transferring) [Lutiella nitroferrum 2002] Length = 336 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 110/336 (32%), Positives = 168/336 (50%), Gaps = 19/336 (5%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLY-----------------GMGMVGGFCHLCIGQ 88 E ++ L YR M+ IR +EE ++Y G G V G HL GQ Sbjct: 2 ETTSDRLLWMYRTMVEIREYEETMAKVYLEGKLPPKIQKGLAFDIGAGPVPGEMHLAAGQ 61 Query: 89 EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 E V VG+ L + D ++ A+R H +A GV +++ AE+ G+ G+ +GKGG MH+F Sbjct: 62 EPVAVGVCAHLRDEDSVVGAHRPHHFAIAKGVPLNEMTAEMFGKVTGLGRGKGGHMHLFD 121 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 + F GIVGA G A A K D + + FG+GAANQG +E+ N+AALW Sbjct: 122 PAHKF-SCSGIVGAGAPQACGAALAAKKLGKDWVAIAFFGEGAANQGSFHEALNLAALWK 180 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L V++V E+N+Y + ++A + + R + +PG+ VD D AV ++ Sbjct: 181 LPVVFVCEDNKYGISVEKGDSTAIASNADRAAGYGMPGVLVDKNDALAVFEAAGVSIDRA 240 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 R +GP +IE+ T RY GH DP YR + E+ +R HDPI + L + Sbjct: 241 RRGEGPTLIEVKTDRYYGHFQGDPETYRPKGEVKALR-EHDPIPALGAVLREQGLLDDAR 299 Query: 329 LKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 E+ +R + + +FA+ PD AE + + + Sbjct: 300 DAELREAIRSKVQAAFDFARHSPYPDVAEAHRHVFV 335 >gi|307292563|ref|ZP_07572409.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphingobium chlorophenolicum L-1] gi|306880629|gb|EFN11845.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphingobium chlorophenolicum L-1] Length = 326 Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 105/312 (33%), Positives = 172/312 (55%), Gaps = 2/312 (0%) Query: 52 ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 ++ YR M LI+ +E++ ++ G + + GQE + + ++L++ D + T YR Sbjct: 12 QIEIYRRMALIKANDERSRKVIMNGRLVMPYYSPRGQEVIPSAISVNLSDEDYICTIYRG 71 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 LA G+ + AE+ GR G KGKGG MH+ G GIVG+ + + G+A Sbjct: 72 SHDQLAKGLPLKDLWAEVAGRTTGTCKGKGGPMHVTYPTKGIMVTTGIVGSTMPIANGLA 131 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + ++ R ++ V FGDGAAN G +ES N+AA+W L VI+V +NN++ T+ + S Sbjct: 132 WGSQLRGDGRVTVASFGDGAANIGAFHESLNLAAVWKLPVIFVCQNNEWGEHTAYDKTS- 190 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + R ++ +PG++VDG D + A ++A+A RA +GP +IE +TYR+ GH D Sbjct: 191 NVKVADRAAAYGMPGVRVDGNDPFEMYAVANEAIARARAGEGPTLIEAMTYRFFGHVFGD 250 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 Y + + +N DP+ + R +L+ A+EG L E+E + K I+ +VEFA + Sbjct: 251 ADAYMDKGRKADAMAN-DPVPRFRAKLIETGVATEGQLAEMEAAIEKDIDEAVEFALASD 309 Query: 352 EPDPAELYSDIL 363 P EL D+ Sbjct: 310 FPGVEELKRDVF 321 >gi|119504531|ref|ZP_01626610.1| acetoin dehydrogenase complex, E1 component, alpha subunit [marine gamma proteobacterium HTCC2080] gi|119459553|gb|EAW40649.1| acetoin dehydrogenase complex, E1 component, alpha subunit [marine gamma proteobacterium HTCC2080] Length = 325 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 107/322 (33%), Positives = 168/322 (52%), Gaps = 9/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 ++N ++ AYRLM IR FEE+ Y G + GF H+ QEA+ VG + + D + Sbjct: 2 DYNLDELTRAYRLMKTIREFEERIRSEYQQGKLPGFIHMYRNQEAIAVGACLDMRNDDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G + +M EL +Q G+ GKGGSMH+ G G + IVG Sbjct: 62 ASTHRGHGHCIAKGCELEGMMLELACKQDGLCNGKGGSMHIADMTKGMLGANAIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A K ++ + + GDGA++QG V E+ N+A + L +I++ ENN YA T Sbjct: 122 IAAGAALTAKTLQTGGVSMAFIGDGASDQGTVAEALNLAVVLQLPMIFMYENNFYAEFTR 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + ++R +F +P VDG D AV A +A+ R GP IE ++ RY Sbjct: 182 NPKPEGR--IAERAGAFGMPSTVVDGSDFFAVHAACREAIERGRNGGGPTAIEAVSARYY 239 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMNVRKIINN 342 GH DP YR +E+ R DP+ L + + D + EI+ ++ ++ Sbjct: 240 GHFEGDPQAYRDDDELRSQREAGDPLPH----FLADSRVAALDASLIAEIDSSIFAELDR 295 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 +VEFA + +P P +LY+D+ + Sbjct: 296 TVEFALAAADPTPEKLYTDVYV 317 >gi|257075784|ref|ZP_05570145.1| dehydrogenase, E1 component [Ferroplasma acidarmanus fer1] Length = 675 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 112/321 (34%), Positives = 167/321 (52%), Gaps = 13/321 (4%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVI 92 E SE N E ++ Y M+ IR++EEK +Y G + G HL GQE Sbjct: 2 EKSEEN-EDLITIYSTMIKIRKYEEKLRDIYLSDKKPLFNIAAGKIPGEMHLSAGQEPSA 60 Query: 93 VGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG 152 M + L D + + +R H +A GVD +++ AE+ G+ GG+SKGKGG MH+F K Sbjct: 61 AWMSVLLRNDDFVYSTHRPHHTAIAKGVDLNRMTAEIMGKHGGLSKGKGGHMHIFDKKVN 120 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GIVG+ G A A+K D I V GDG+ NQG ES N+A+LW L VI Sbjct: 121 F-ACAGIVGSSFPSALGAALASKLDGKDSIAVAFGGDGSLNQGMFLESLNLASLWKLPVI 179 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +VIENN +A+ ++ N + R F +PG+ ++ D + +KAV R+ + Sbjct: 180 FVIENNDWAISVETKDSTPLKNDAIRADGFGMPGVYIENNDPVKMYKAAEKAVKRARSGE 239 Query: 273 GPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 GP +I + TYRY GH DP YR ++++ E+ + DPI+ + LL S+ + I Sbjct: 240 GPTLIAIDTYRYYGHFEGDPEVYRPKDQVKELLAK-DPIKIMESDLLKKGIISKDEDDRI 298 Query: 333 EMNVRKIINNSVEFAQSDKEP 353 + + I+ + FA+ P Sbjct: 299 NNSAMEEISQAFAFAEDSPLP 319 >gi|224369363|ref|YP_002603527.1| AcoA [Desulfobacterium autotrophicum HRM2] gi|223692080|gb|ACN15363.1| AcoA [Desulfobacterium autotrophicum HRM2] Length = 328 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 108/327 (33%), Positives = 172/327 (52%), Gaps = 14/327 (4%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEK-------AGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 ++ + + + Y M+L R+FEEK Q+ GM + L GQE V GM Sbjct: 4 NQISPDLQTRLYSNMVLTRKFEEKIVALSQKPHQMPGMQI------LANGQEGVSTGMVS 57 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +LT D ++T +R HGH+LA G+D + +MAE+ + GI+ GK G++H+ + + Sbjct: 58 ALTPEDVIVTNHRSHGHLLARGLDMNLLMAEIMAKATGINGGKAGTLHLAAPEVNILMTS 117 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 +VGA L G AFA +Y++ I VV FGDGAA +G V+E+ N+A +W L +++V EN Sbjct: 118 TVVGAGSPLALGAAFAQQYKQEKAITVVFFGDGAAAEGSVHEAMNLAGIWKLPLLFVCEN 177 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N +A A + +R + +PG VDG D+ AV + + +CR+ KGP ++ Sbjct: 178 NCWAGAQRHEEHCATQHIFERAKGYGMPGQSVDGNDVEAVYSLAMEFAEHCRSGKGPALM 237 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR RGH D +Y +E+ E + PI + R +LL E ++ I+ +V Sbjct: 238 EALTYRMRGHGEQDHQHYVDPKEL-EAWAARCPISRYRTKLLDRGVLDEQKIQAIDQDVN 296 Query: 338 KIINNSVEFAQSDKEPDPAELYSDILI 364 + + F P P L + + + Sbjct: 297 TRVALAEAFGNQSPYPGPDTLLTGLFV 323 >gi|256392443|ref|YP_003114007.1| pyruvate dehydrogenase (acetyl-transferring) [Catenulispora acidiphila DSM 44928] gi|256358669|gb|ACU72166.1| Pyruvate dehydrogenase (acetyl-transferring) [Catenulispora acidiphila DSM 44928] Length = 340 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 126/313 (40%), Positives = 176/313 (56%), Gaps = 15/313 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR + LIRRFEE+A +L G V G H GQEA+ G +L D + + +R HGH+ Sbjct: 27 YRTVRLIRRFEERAVELVRAGEVFGGIHPYTGQEAIAAGTCGALRADDLITSTHRGHGHV 86 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D +++MAE+ GR G+++G+GGSMH G G + IVGA + TG A+A + Sbjct: 87 LAKGADPARMMAEIAGRATGLNRGRGGSMHAADFGVGILGANAIVGAAAPIATGAAWAAR 146 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 SD++ V FGDGA +QG V E+FN+AALW VI+V ENN +A T A A + Sbjct: 147 CAGSDRVVVTYFGDGAVSQGVVLETFNMAALWRAPVIFVCENNGFATTTRTQDAVAGS-I 205 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-- 293 + R +F IP +V GMD AV A +AVA R+ +GP ++E TYRY H + A Sbjct: 206 TGRAEAFGIPAERVWGMDPEAVYAATARAVARARSGEGPTLLECETYRYDAHHTWEHAAR 265 Query: 294 -NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YRT EE+ E+ + DP++ R+ G I+ V +++ +V FA Sbjct: 266 PRYRTPEEV-ELGRSVDPLDIQGARI------DAGVRARIDAEVDVLLDEAVRFALESPR 318 Query: 353 PDPAE----LYSD 361 PDPA LY+D Sbjct: 319 PDPATALDFLYAD 331 >gi|284045533|ref|YP_003395873.1| pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] gi|283949754|gb|ADB52498.1| Pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] Length = 326 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 96/256 (37%), Positives = 142/256 (55%), Gaps = 1/256 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M IR FEEK +LY G + G HL IGQEA VG+ L D ++ +R H H LA Sbjct: 19 MWRIRAFEEKVAELYAKGRLFGLLHLGIGQEASAVGVCADLNADDYVVGGHRSHTHALAK 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G ++AE+ G+ G GKGGSMH+ + + GF G+VG + LG G A + Sbjct: 79 GAQVKPLLAEIAGKAAGYCGGKGGSMHIVAAEAGFITATGVVGGNIPLGVGAALGARMAG 138 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ V FGDGA G +ES N+A+LW L +++V ENN YA +++ + + ++ Sbjct: 139 RGQVAAVFFGDGAVQTGAFHESLNLASLWKLPLVFVCENNGYAEFSALEDQTVVPHLAQH 198 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 G ++ I +DG D+ AV+ + AV R+ GP +E++TYR RGH D A YR Sbjct: 199 GETYGIASRTIDGNDVLAVRDAVAIAVERARSGGGPTFLEVMTYRLRGHYEGDQAKYREA 258 Query: 299 EEINEMRSNHDPIEQV 314 E E ++ DPI+++ Sbjct: 259 SESAEWKAK-DPIQRL 273 >gi|296115650|ref|ZP_06834277.1| dehydrogenase E1 component [Gluconacetobacter hansenii ATCC 23769] gi|295977899|gb|EFG84650.1| dehydrogenase E1 component [Gluconacetobacter hansenii ATCC 23769] Length = 720 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 111/306 (36%), Positives = 156/306 (50%), Gaps = 25/306 (8%) Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 LIR FEE L G G+V G H IGQE VG + L GDQ+ ++R H LA + Sbjct: 39 LIRAFEESVLDLAGSGLVHGPAHSSIGQEGGAVGSILPLLPGDQVNGSHRGHHQFLAKAL 98 Query: 121 ---------------------DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 ++E+ G + G G+GGSMH+ + G G + I Sbjct: 99 GYVAQHQPLTCTAPFDGAIRETLHGALSEIMGLRTGFCLGRGGSMHLRWAEAGVTGTNAI 158 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VG V L G A+A++ + + V FGDGA N G V E+ N+AA W L +I+ IENN Sbjct: 159 VGGGVPLAAGAAWADRLAGTHNVSVTYFGDGAVNIGSVLETMNLAAAWKLPLIFFIENNL 218 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ T V+ A+A+ S RG++F IP QVDGMD A M++A+A CRA GP +IE Sbjct: 219 YAVSTHVNEATAEARLSSRGLAFGIPSWQVDGMDPVATFMAMNEALAVCRAGNGPAVIEA 278 Query: 280 LTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 YRY + P + YR + E R DPIE V + ++ + + D+ ++ Sbjct: 279 TVYRYFHQNGKLPGSAFGYRDKNEEAAWR-ERDPIEHVGREMIRRQLITSQDISDLRERC 337 Query: 337 RKIINN 342 R I+ N Sbjct: 338 RAIMEN 343 >gi|62185093|ref|YP_219878.1| pyruvate dehydrogenase e1 component, alpha subunit [Chlamydophila abortus S26/3] gi|62148160|emb|CAH63917.1| pyruvate dehydrogenase e1 component, alpha subunit [Chlamydophila abortus S26/3] Length = 341 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 111/303 (36%), Positives = 162/303 (53%), Gaps = 4/303 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 + MLLIR FE + + Y G+VGGF H GQEAV + ++YR H + Sbjct: 36 KYMLLIREFETRGEEAYLEGLVGGFYHSYSGQEAVATAALANTGLDQWFFSSYRCHALAV 95 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 + + AEL G++ G + G+GGSMHM F GG GIVG Q+ L G AFA KY Sbjct: 96 LLNIPLRSLAAELLGKETGCALGRGGSMHMCGPN--FPGGFGIVGGQIPLAAGAAFAIKY 153 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R DKI + GDGA QG +E+ N AL +L ++ +IENN + MGT+++ A A+ Sbjct: 154 RGEDKISLGFMGDGAVAQGVFHETLNFTALHSLPLMLIIENNGWGMGTALNHAIAKQPIG 213 Query: 237 K-RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + +G S+ I ++G D+ +A Y + + P+I+E L R+RGHS+SDP Y Sbjct: 214 ESQGASYGIRSFTLNGFDLFNCLLGFKEAYEYMQKTRLPVIVECLCSRFRGHSISDPNLY 273 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R++EE+ E DPI +K L+ SE + + + + + A+SD EP Sbjct: 274 RSKEEM-ECLIKKDPIVFAKKWLIQLGVMSEESFQALREECKNKVLKAFTEAKSDPEPTI 332 Query: 356 AEL 358 A L Sbjct: 333 ATL 335 >gi|311900082|dbj|BAJ32490.1| putative dehydrogenase [Kitasatospora setae KM-6054] Length = 357 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 127/353 (35%), Positives = 189/353 (53%), Gaps = 20/353 (5%) Query: 18 NPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 P + R+ +D D P L+ ++ YR++ LIR FEE A L G Sbjct: 10 GPDGTGLRSDAPDLDAPDAPDLDAPDLGTLAGR-----YRMLRLIRGFEELALGLVKAGE 64 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 + G H IGQEAV VG+ +L D++ + +R HGH+LA G +++AEL GR GG++ Sbjct: 65 ITGGIHPYIGQEAVAVGVCAALRPQDRITSTHRGHGHVLAKGAAPDRLLAELLGRTGGLN 124 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 +G+GGSMH G G +G+VGA ++ G A++ + D++ V FGDGA NQG + Sbjct: 125 RGRGGSMHAADFSLGILGANGMVGAGGAIAVGAAWSARQSGQDRVAVAFFGDGALNQGVL 184 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 ESFN+AA+WNL V++V ENN YA + A A + + R +F IP +VDGMD AV Sbjct: 185 LESFNLAAMWNLPVLFVCENNGYATTLPAATAVAGSG-TGRAAAFGIPAAEVDGMDTEAV 243 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD---PANYRTREEINEMRSNHDPIEQV 314 +A +AV A GP +E TYR+ GH + YRT EE+ + R+ DP+ + Sbjct: 244 RAAAAEAVGRAAAGGGPGFLECHTYRFEGHHTMERLMKLRYRTPEEVADWRA-LDPLPRA 302 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP----AELYSDIL 363 L G ++ +V + ++ + +FA + P P LY+D L Sbjct: 303 AALL------PPGRAARLDASVAEQLDAARQFALGSELPSPEGASEHLYADGL 349 >gi|218678338|ref|ZP_03526235.1| pyruvate dehydrogenase alpha subunit protein [Rhizobium etli CIAT 894] Length = 146 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 93/142 (65%), Positives = 112/142 (78%), Gaps = 9/142 (6%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 SAK AA +S G V++F++++EL AYR MLLIRRFEEKAGQLYGMG +GG Sbjct: 14 TSAKPAAKAS---------NGGPVADFDRDEELKAYREMLLIRRFEEKAGQLYGMGFIGG 64 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL IGQEAV+VGM+M+ EGDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GK Sbjct: 65 FCHLYIGQEAVVVGMQMAQKEGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGK 124 Query: 141 GGSMHMFSTKNGFYGGHGIVGA 162 GGSMHMFS + FYGGHGIVGA Sbjct: 125 GGSMHMFSKEKHFYGGHGIVGA 146 >gi|331697492|ref|YP_004333731.1| pyruvate dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326952181|gb|AEA25878.1| Pyruvate dehydrogenase (acetyl-transferring) [Pseudonocardia dioxanivorans CB1190] Length = 334 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 107/295 (36%), Positives = 152/295 (51%), Gaps = 1/295 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M IR FEE+ G L V G HL IG E V + L +GD + + +R HGH +A Sbjct: 26 MWRIRAFEERVGALKRADEVHGLIHLSIGGEGVAAAVCRQLRDGDAVYSGHRAHGHAVAK 85 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G + MAEL GR+GG+ G GGSMH+ +GF G G+VG + L G A A K R Sbjct: 86 GTPLDRTMAELMGREGGLCSGMGGSMHLVDVAHGFLGATGVVGGNIPLALGSALAAKQRG 145 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 +D + VV FGDGA G ES N+A LW L V+ V ENN +A T S + S Sbjct: 146 TDAVAVVFFGDGAVQAGLFTESVNLATLWRLPVLLVCENNGFAEFTPRSAHTTVERVSDV 205 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 + +P VDG ++ V + + +A RA +GP ++E LT+R RGH DP YR Sbjct: 206 VAPYPLPRTTVDGNEVGEVWSAFSELLARARAGEGPALLECLTHRLRGHYEGDPDRYREA 265 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + + DPI ++++ W + + +E R ++ +V +A+S P Sbjct: 266 VSTEDWQRK-DPILRLQRAGHDAGWLAADEPAALEAAARAEVDEAVAWARSSPFP 319 >gi|332285899|ref|YP_004417810.1| putative 2-oxo acid dehydrogenase alpha subunit [Pusillimonas sp. T7-7] gi|330429852|gb|AEC21186.1| putative 2-oxo acid dehydrogenase alpha subunit [Pusillimonas sp. T7-7] Length = 322 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 108/304 (35%), Positives = 170/304 (55%), Gaps = 3/304 (0%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 ++ L+ YR + IR E +L+ G V GF HL +GQEA+ G+ +L + D + T + Sbjct: 8 DELLALYRTIKTIRTVENSLTRLFADGEVPGFIHLSVGQEAIAAGICSALGDQDTLATTH 67 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R HGH+LA G+ E+ G+ GG+ G+GGSMH+ G G +GIV A + + G Sbjct: 68 RGHGHVLARGLSLPHFFKEVMGKAGGVCGGRGGSMHVADMDIGILGANGIVAAGIPIAMG 127 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 A A++ R++ I V FGDGA +G ++E+ N+AALW L ++ V ENN ++ + S Sbjct: 128 SAVAHQTRKTGGIAVAFFGDGAMAEGVLHETLNMAALWKLPLLLVCENNGWSEFSPTSEQ 187 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 A T +F IP Q+DG D+R V KAVA R KGP+++E +T R RGH Sbjct: 188 FAGT-LKGLAAAFKIPHQQLDGNDVREVALATRKAVATLRKGKGPLVLECVTKRVRGHYE 246 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 DP YR +++ + + DP+ + R LL A+ + +++ +V ++ ++ A+ Sbjct: 247 GDPQKYRDADDLASLDAV-DPVARTRV-LLQEAGATREQVDQVDQDVGADVDAAIAQARE 304 Query: 350 DKEP 353 D EP Sbjct: 305 DSEP 308 >gi|328544083|ref|YP_004304192.1| Pyruvate dehydrogenase (acetyl-transferring) [polymorphum gilvum SL003B-26A1] gi|326413827|gb|ADZ70890.1| Pyruvate dehydrogenase (Acetyl-transferring) [Polymorphum gilvum SL003B-26A1] Length = 328 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 103/325 (31%), Positives = 167/325 (51%), Gaps = 12/325 (3%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMS 98 K+Q + Y M+ R +E+ +Y G G V G HL GQE G+ + Sbjct: 5 KDQLIWMYDKMVEARYYEDSLAAIYMEGKTPKFDIGSGPVPGEMHLAAGQEPCAAGVCVH 64 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L D + +R H +A GVD +++ AE+ G++ G++ G+GG MH+ F G Sbjct: 65 LRADDTVTATHRPHHAAIAKGVDLNRMTAEIFGKKTGLAGGRGGHMHLLDPAVNF-ACSG 123 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 I+ G A A + + D + V GDGAANQG +E+ N+AALW L V++VIE+N Sbjct: 124 IIAQGTGPAVGAALAARLQGRDSVAVSYVGDGAANQGAFHEALNLAALWKLGVVFVIEDN 183 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 + + ++++A + + R ++ IPG+ V D V +AVA R GP +IE Sbjct: 184 AWGISVPKAKSTAVRDNAVRAAAYGIPGVHVADNDTLEVFKAAGEAVARARRGDGPTLIE 243 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + TYRY GH DP YR E+ +++ DPI+++ K +L + A+ DL + R+ Sbjct: 244 IETYRYYGHFQGDPELYRPAGEVAALKAK-DPIDRLTKHMLESGAATRADLDAVAAKARQ 302 Query: 339 IINNSVEFAQSDKEPDPAELYSDIL 363 ++ +++FA+ P P E + Sbjct: 303 RVDAAIKFARDSDYPAPEEALEHVF 327 >gi|331695913|ref|YP_004332152.1| pyruvate dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326950602|gb|AEA24299.1| Pyruvate dehydrogenase (acetyl-transferring) [Pseudonocardia dioxanivorans CB1190] Length = 321 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 108/271 (39%), Positives = 148/271 (54%), Gaps = 1/271 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + +Q L YR+M IR FE AG L+ G + GF HL GQEAV G+ L D + T Sbjct: 4 SADQALDLYRVMATIRVFETTAGSLFAAGELPGFIHLSSGQEAVAAGVCSVLRRDDALTT 63 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A G ++AEL GR G KG+ GSMH+ + G G + IVG + + Sbjct: 64 THRGHGHCIAKGGKVFGMLAELYGRAAGYGKGRSGSMHIADSSAGILGANAIVGGGLPMA 123 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A++ + R D++ V FGDGA +G +E+ N+AALW L ++ V ENN+ A T S Sbjct: 124 LGAAWSAQVRGEDRVAVAFFGDGAVAEGVFHETLNLAALWRLPLVLVCENNRVAEMTPSS 183 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 A T + + IPG VDG D+ V+ AVA RA +GP ++E T+R RGH Sbjct: 184 VHLATTRVADFAGPYAIPGATVDGNDVLVVRDAAATAVARARAGEGPTLLECETHRIRGH 243 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 DP YR+ EE + DP+ R RL Sbjct: 244 FEGDPLRYRSAEETAAW-AARDPLVLFRARL 273 >gi|82705751|ref|XP_727097.1| pyruvate dehydrogenase E1 subunit alpha [Plasmodium yoelii yoelii str. 17XNL] gi|23482783|gb|EAA18662.1| pyruvate dehydrogenase E1 alpha subunit [Plasmodium yoelii yoelii] Length = 532 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 121/383 (31%), Positives = 192/383 (50%), Gaps = 60/383 (15%) Query: 38 FLEGFEVSEF------NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAV 91 ++E +++E+ NK + + Y M L R FE +LY + GF HL GQEA+ Sbjct: 85 YIENNKLAEYISDVSINKNEICTLYEDMNLGRLFENLVAKLYYNKKINGFVHLYNGQEAI 144 Query: 92 IVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQ-GGISKGKGGSMHMFSTK 150 G+ +L D +++ YR+H H ++ V +I+ EL G G ++GKGGSMH+++ K Sbjct: 145 STGIIKNLRNSDFVVSTYRDHVHAISKNVPVKEILNELYGNYYGSTNQGKGGSMHIYNKK 204 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRR-------------------------------- 178 N F GG G +G Q+ + G+A++ Y++ Sbjct: 205 NNFIGGFGFIGEQIPISVGLAYSVLYKKEFIQDTSNKEYETCSEKQNTLMNHVNDVKENL 264 Query: 179 ------------SDKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +D VVCF GDG +N GQ +ES N+A+ +NL +I+VIENN +A+G Sbjct: 265 TKHDENEHDKNENDLDVVVCFLGDGTSNIGQFFESLNLASTYNLPIIFVIENNNWAIGME 324 Query: 226 VSRASA--QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK-GPIIIEMLTY 282 SR+S TN +G +FNI +VDG D+ ++ K + R K GPI+IE +TY Sbjct: 325 SSRSSLGDLTNNYNKGKAFNITTYKVDGNDVLSIYKLAKKKINEIRKKKSGPILIEAITY 384 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R RGHS++DP R +E + DPI Q+ + +N + + ++KI+ + Sbjct: 385 RTRGHSLADPDLLRRLDEKTSWKK-IDPIIQLTNYMKNNNIVDSIYFENTKKEIQKILLD 443 Query: 343 SVEFAQSD----KEPDPAELYSD 361 + A S+ K D +LY + Sbjct: 444 AQNDADSNFEKSKNIDVCKLYDN 466 >gi|159038245|ref|YP_001537498.1| dehydrogenase E1 component [Salinispora arenicola CNS-205] gi|157917080|gb|ABV98507.1| dehydrogenase E1 component [Salinispora arenicola CNS-205] Length = 323 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 118/304 (38%), Positives = 167/304 (54%), Gaps = 11/304 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR + LIRRFEE+A +L G + G H IGQE + G+ +L D + +R HGH+ Sbjct: 10 YRTVRLIRRFEERAIELVRSGHIVGGIHPYIGQEGIAAGVCAALRPDDVVAGTHRGHGHV 69 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D +++MAEL GR G+++G+GGSMH G G + IVGA ++ TG +A + Sbjct: 70 LAKGADPARMMAELCGRVTGLNRGRGGSMHAADFAVGVLGANAIVGAGGAIVTGAVWARR 129 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R D + V GDGA N+G + E+FN+AALW + V++V ENN YA V+ S + Sbjct: 130 RRGEDLVGVSFLGDGAVNEGMLLEAFNLAALWRVPVLFVCENNGYATTMPVAD-SVAGSI 188 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-- 293 R +F I VDG D AV AT A+A RA GP +E TYR+ H + Sbjct: 189 PARAEAFGIRASVVDGQDPAAVHATTAAALARMRAGGGPEFLEARTYRFDAHHTFEHTVR 248 Query: 294 -NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 +YR+ EE+ RS DP+ RL S D ++ +V +++ +V A + E Sbjct: 249 LDYRSAEEVERGRSR-DPVRIAGSRL------SATDRANVDADVEAVLDVAVAEALAAPE 301 Query: 353 PDPA 356 PDPA Sbjct: 302 PDPA 305 >gi|148553979|ref|YP_001261561.1| pyruvate dehydrogenase [Sphingomonas wittichii RW1] gi|148499169|gb|ABQ67423.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphingomonas wittichii RW1] Length = 331 Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 113/322 (35%), Positives = 177/322 (54%), Gaps = 3/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +++ ++ L YR M IR+FE+ A ++ G + G H GQEA VG M+L + D Sbjct: 1 MTDGQNDRSLEKYRRMQRIRQFEDLAEAIHAQGEIPGSLHTYAGQEASGVGACMALDDTD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M+ +R HGH +A G +MAEL G+ GI KGKGGSMH+ G G IVG+ Sbjct: 61 YMVGTHRSHGHPIAKGAKLRPLMAELLGKATGICKGKGGSMHLSDFSVGSLGETSIVGSG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V + G A +K + + ++ + FGDGA N+G +E N+AA+W L I+V ENN YA+ Sbjct: 121 VPVAAGAALGSKLQGNGRVALCFFGDGATNEGAFHEGMNLAAVWALPAIFVCENNGYAVS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S + ++R ++ +P + VDG D+ AV+A + +AV R GP ++E TYR Sbjct: 181 TPASATVPVKDVAERARAYGMPSIIVDGQDVDAVEAAVAEAVGRARTGGGPTLVETKTYR 240 Query: 284 YRGHSMSDPANYRTR-EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 Y H+++ R E++E R DP+ R +L+ A+ L IE V + + Sbjct: 241 YADHAVNMGRVLLDRGGEVDEWR-KRDPLALYRAKLIAGGTAA-ALLDAIEREVADEVAD 298 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 +++FA+ P+ AE + D+ + Sbjct: 299 ALQFARDSAWPEQAEAFDDVFV 320 >gi|311109090|ref|YP_003981943.1| dehydrogenase E1 component [Achromobacter xylosoxidans A8] gi|310763779|gb|ADP19228.1| dehydrogenase E1 component [Achromobacter xylosoxidans A8] Length = 727 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 103/304 (33%), Positives = 164/304 (53%), Gaps = 24/304 (7%) Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH--------G 113 IR FEE L G+V G H +GQE VG ++L GDQ+ ++R H Sbjct: 41 IRAFEEAVLDLAAEGLVHGPAHSSVGQEGGAVGSVLALGAGDQINGSHRGHHQFLAKALQ 100 Query: 114 HILACGVDA------------SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 H+ G+D K +AE+ G G G+GGSMH+ + G G + IVG Sbjct: 101 HVAPLGLDPRNPLTPAIDEVLQKTLAEIMGLAQGYCHGRGGSMHLRWLEAGALGTNAIVG 160 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 V L G +A+K+ +D++ V FGDGA N G V E+ N+ A W + + IENN+YA Sbjct: 161 GGVPLAAGAGWAHKHAGTDRVAVTYFGDGAVNIGSVLETMNLTAAWKTPLCFFIENNRYA 220 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T+V ++A+ S RG++FNIP +VDGMD AV TM +AVA+ RA GP I+E+ Sbjct: 221 VSTTVEESTAEPRLSARGLAFNIPSWKVDGMDPLAVHLTMSEAVAHMRAGNGPTIVEVDV 280 Query: 282 YRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 YR+ + P + YR+++E ++ R DP++++ ++ K ++ ++ + + Sbjct: 281 YRFFHQNGPFPGSAFGYRSKDEESQWR-RRDPLDKIATEMIGRKLITQAEVDALRQRCKD 339 Query: 339 IINN 342 ++ + Sbjct: 340 VMKD 343 >gi|170735358|ref|YP_001774472.1| pyruvate dehydrogenase (acetyl-transferring) [Burkholderia cenocepacia MC0-3] gi|169821396|gb|ACA95977.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia cenocepacia MC0-3] Length = 328 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 110/308 (35%), Positives = 165/308 (53%), Gaps = 1/308 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M LI++ +E+ + G + + GQE + M + LT+ D + T YR + Sbjct: 16 YRRMALIKQNDERFRAVIKSGKLVMPYYSPRGQEVIPSAMSVCLTDDDYICTIYRGVHDM 75 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A GV +++ AEL GR G KGKGG MH+ +G GIVG+ + + G+A A + Sbjct: 76 IAKGVPLNELWAELAGRVTGTCKGKGGPMHVTHPASGVMVTTGIVGSSMPIANGLALAAQ 135 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R ++ V FGDGA+N G +ES N+A++W L VI+V +NN YA T + ++ N Sbjct: 136 IRGEPRVAVAYFGDGASNIGAFHESLNMASVWKLPVIFVCQNNGYAEHTKYAYGTSVANI 195 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 ++R V++ +PG+ V+G D A+ AV R GP +IE T+R+ GH DP Y Sbjct: 196 AQRAVAYQMPGVTVNGNDPIAMHKAARDAVDRARNGGGPTLIEANTFRFHGHVFGDPDAY 255 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 E + DP+ R+ L+ K A+E L +E + I+ +VEFA S PD Sbjct: 256 MDEHEKAAWVAR-DPVPLFRQWLIDAKHATEETLAAMESDHDARIDAAVEFALSSAYPDV 314 Query: 356 AELYSDIL 363 AEL DI Sbjct: 315 AELGRDIF 322 >gi|156540365|ref|XP_001602168.1| PREDICTED: similar to L(B002) [Nasonia vitripennis] Length = 177 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 85/170 (50%), Positives = 118/170 (69%), Gaps = 3/170 (1%) Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 +V LG GIAFA+KY+ + +C+ +GDGAANQGQ++E +N++ LWN+ I++ ENN Y Sbjct: 9 TKVPLGAGIAFAHKYQNTGGVCLALYGDGAANQGQIFEVYNMSKLWNVPCIFICENNGYG 68 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 MGTSV RASA T + RG +PG+ VDGMD+ AV+ A+ YC + KGP+++E T Sbjct: 69 MGTSVDRASASTEYYTRGDY--VPGIWVDGMDVLAVREATKFAIDYCTSGKGPLVMETFT 126 Query: 282 YRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 YRY GHSMSDP +YRTREEI E+R DP+ ++R+L+ S +LK Sbjct: 127 YRYSGHSMSDPGTSYRTREEIQEVRQTRDPLTSFKERILNANLVSSDELK 176 >gi|299470625|emb|CBN78566.1| pyruvate dehydrogenase [Ectocarpus siliculosus] Length = 806 Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 111/339 (32%), Positives = 174/339 (51%), Gaps = 15/339 (4%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 VD EG+ S +KE +L Y +M L R+FE Q Y G + GF HL GQE + Sbjct: 92 VDESKFEGY--SAISKEDQLKGYEMMQLCRQFENACNQAYMQGKIRGFMHLDNGQEGIPA 149 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 + SL GD+ ++ YREH H LA GVDA ++M EL + GG +G GGSMH++ F Sbjct: 150 MVADSLGNGDKKMSYYREHTHALASGVDAGRVMGELFAKDGGTCRGAGGSMHVYDKDTHF 209 Query: 154 YGGHGIVGAQVSLGTGIAFA---------NKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 GG +V Q++ G A + + D++ +V G+GAA G++ E+ N A Sbjct: 210 QGGWALVAEQIAYAAGAARSILMDRQLDPEGMKDDDRLTIVFLGEGAAQNGRMAETLNAA 269 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 A L +++++ +N A+ T +A ++ +G + +PG+ VDG D+ + +T Sbjct: 270 AKEKLPLLFLVIDNGRAINTFTPDVAANSDVFAQGKHYGVPGVNVDGQDMLQMLSTGRAV 329 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR-EEINEMRSNHDPIEQVRKRLLHNKW 323 Y R + GP I+++ TYR+ GHS +DP + R R +E R+ DP+ L Sbjct: 330 TDYVRKN-GPAILQVQTYRFSGHSPADPEHERGRKQEKRWARATQDPLAIYESEALEFGI 388 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 E +L + + +VEFA + P PA L ++ Sbjct: 389 TKE-ELDAAKKRAGVTVKAAVEFADASPPP-PASLAKEL 425 >gi|221056218|ref|XP_002259247.1| pyruvate dehydrogenase alpha subunit [Plasmodium knowlesi strain H] gi|193809318|emb|CAQ40020.1| pyruvate dehydrogenase alpha subunit, putative [Plasmodium knowlesi strain H] Length = 547 Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 111/316 (35%), Positives = 165/316 (52%), Gaps = 33/316 (10%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M L R FE +LY + GF HL GQEA+ G+ +L D + + YR+H H Sbjct: 144 YEDMHLGRMFENLVAKLYYSKRINGFVHLYNGQEAISSGIIKNLRASDFVTSTYRDHVHA 203 Query: 116 LACGVDASKIMAELTGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 ++ V +++ EL G G ++GKGGSMH++S + F GG G +G Q+ + G+A++ Sbjct: 204 ISKNVPPKEVLNELYGNYYGSTNRGKGGSMHIYSKRENFIGGFGFIGEQIPIAVGLAYSI 263 Query: 175 KYRRS-------------------------DKICVVCF-GDGAANQGQVYESFNIAALWN 208 Y+R D VVCF GDG AN GQ +ES N+AA +N Sbjct: 264 LYKREFPLEGEIHPSGGAVSPKGNLLSPSEDSNVVVCFLGDGTANIGQFFESLNLAATYN 323 Query: 209 LNVIYVIENNQYAMGTSVSRASA---QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 L +I+VIENN +A+G SR+S Q N+SK G +F I +VDG D+ + K + Sbjct: 324 LPIIFVIENNNWAIGMEGSRSSTDDLQNNYSK-GKAFKIDTYKVDGNDVIGLYKLAKKKI 382 Query: 266 AYCRAHK-GPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 R + GP++IE +TYR +GHS++DP R +EE + DPI + + Sbjct: 383 NQMRRRECGPVLIEAITYRAKGHSLADPDELRIQEEKASWKK-RDPIIHLANYMKEKNIV 441 Query: 325 SEGDLKEIEMNVRKII 340 E +EI+ + I+ Sbjct: 442 DESFFEEIKKKTKHIL 457 >gi|223998030|ref|XP_002288688.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975796|gb|EED94124.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 314 Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 106/315 (33%), Positives = 170/315 (53%), Gaps = 10/315 (3%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +K + Y+ M L R FE + Y G + GF HL GQE++ MK++L D+ + Sbjct: 1 DKNTLMEIYKSMQLSRLFEVACTKQYMAGKIKGFMHLDNGQESIPAFMKIALQRTDKKYS 60 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YREH H LA GVD KIMAEL ++GG S+G GGSMH++ F GG +V Q+ G Sbjct: 61 YYREHCHALASGVDPRKIMAELCMKEGGTSRGAGGSMHIYDKPTRFQGGWALVAEQLPYG 120 Query: 168 TGIAFANKYRRS--------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G A N+ + + ++I VV GDG + G++ E N + L ++ VI +N Sbjct: 121 AGAA-KNQIKSTKSLSRDGDNRIAVVFVGDGGSQNGRLPEILNACSTQKLPLLIVIIDNG 179 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 A+ T ++ T + G +N+PG+ VDG D V + R+ KGP ++++ Sbjct: 180 RAINTFTPDVASNTMKFELGSHYNVPGILVDGCDASTVAKAGLAITDFVRSGKGPAVMQV 239 Query: 280 LTYRYRGHSMSDPANYRTR-EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYR+ GHS +DP + R R +E R + DPI++ K+ + + +LK ++ ++ Sbjct: 240 HTYRFMGHSPADPEHERGRKDEKTWAREHCDPIKEFEKKYIACGMLTPDELKAVKKEMQS 299 Query: 339 IINNSVEFAQSDKEP 353 +++++V FA + EP Sbjct: 300 VVSDAVAFADASPEP 314 >gi|15835134|ref|NP_296893.1| pyruvate dehydrogenase, E1 component, alpha subunit [Chlamydia muridarum Nigg] gi|270285306|ref|ZP_06194700.1| pyruvate dehydrogenase, E1 component, alpha subunit [Chlamydia muridarum Nigg] gi|270289323|ref|ZP_06195625.1| pyruvate dehydrogenase, E1 component, alpha subunit [Chlamydia muridarum Weiss] gi|301336703|ref|ZP_07224905.1| pyruvate dehydrogenase E1 component alpha subunit [Chlamydia muridarum MopnTet14] gi|7190556|gb|AAF39358.1| pyruvate dehydrogenase, E1 component, alpha subunit [Chlamydia muridarum Nigg] Length = 340 Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 104/316 (32%), Positives = 173/316 (54%), Gaps = 6/316 (1%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 F + F + ++ + MLLIR FE + + Y G+VGGF H IGQE+V Sbjct: 20 FVIENFGNDFCINLLKKMLLIREFEIRGEEAYLEGLVGGFYHSYIGQESVATAALACTGT 79 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 ++YR HG + + ++ AEL G++ G + G+GGSMHM + GG GIVG Sbjct: 80 DHWFFSSYRCHGVAILLDIPLRQLAAELLGKETGCALGRGGSMHMCGDR--LPGGFGIVG 137 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ L G AF+ KY++ I + GDGA QG +E+ N A+L L ++ +IENN + Sbjct: 138 GQIPLAAGAAFSMKYQKLPSISLCFIGDGAVAQGVFHETLNFASLHTLPLMLIIENNGWG 197 Query: 222 MGTSVSRASAQTNFSK-RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 MGT++ RA A+ ++ + S+ + + ++G D+ +A + + P+++E L Sbjct: 198 MGTALHRAIAKQPIAESQASSYGLSSITLNGFDLFNSLIGFKEAYQHMQKTGAPVVVEAL 257 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 R+RGHS+SDP YR++EE+ + DPI ++ L+ SE D K++ ++ + Sbjct: 258 CSRFRGHSISDPNLYRSKEEMQCLL-KRDPILFAKEWLIRANVLSEDDFKDLRQTSKEAV 316 Query: 341 NNSVEFAQSDKEPDPA 356 + F+Q+ +P+PA Sbjct: 317 LEA--FSQARLDPEPA 330 >gi|315923792|ref|ZP_07920022.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Pseudoramibacter alactolyticus ATCC 23263] gi|315622912|gb|EFV02863.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Pseudoramibacter alactolyticus ATCC 23263] Length = 324 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 103/309 (33%), Positives = 172/309 (55%), Gaps = 4/309 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M +R FEEK +L G + G HL IGQEA +G ++L GD + +R HG Sbjct: 18 YR-MNQVRFFEEKIRELVADGALNGAVHLAIGQEASDIGACLALDAGDWVTMTHRCHGQA 76 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G++ ++MAE+ G++ G+ GK GS+H+ G + G S+ G A K Sbjct: 77 IASGMEVRRMMAEVLGKKSGLCGGKAGSLHLADASVRNLGAADVPGQGFSVACGAALTQK 136 Query: 176 YRRSDKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 +++ V+CF GDGAA++G +E+ N+AA+W L VI+ IENN Y+ T++ + Sbjct: 137 LQKTGN-AVLCFGGDGAADEGSFHEALNLAAVWQLPVIFFIENNFYSGTTAIEDHMKGEH 195 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + R ++ +PG+ VDG D+ AV +D+A A+ + GP +IE TYR GH +D Sbjct: 196 IADRAHAYGMPGITVDGNDVVAVFTAVDQARAHVKEGNGPALIEAQTYRLCGHDTADLQL 255 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR +EE+ N DPI + ++L + + + +++ N ++ + + +FA + EP Sbjct: 256 YRPKEEVEAWVEN-DPIVRFEEQLQSDFQMAPEVIDQLKKNAKRSVEEAADFAINADEPA 314 Query: 355 PAELYSDIL 363 +E+ + + Sbjct: 315 MSEVITGVF 323 >gi|209515578|ref|ZP_03264443.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. H160] gi|209504045|gb|EEA04036.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. H160] Length = 328 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 107/308 (34%), Positives = 165/308 (53%), Gaps = 1/308 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M LI++ +E+ + G + + GQE + M + LT+ D + T YR + Sbjct: 16 YRRMALIKQNDERLRAVIKAGKLVMPYYSPRGQEVIPSAMSVCLTDDDYICTIYRGIHDM 75 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A GV ++ AEL GR G KGKGG MH+ +G GIVG+ + + G+A A + Sbjct: 76 IAKGVPLKELWAELGGRVTGTCKGKGGPMHVTHPASGVMVTTGIVGSSMPIANGLALAAQ 135 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R ++ V FGDGA+N G +ES N+AA+W L VI+V +NN YA T + ++ N Sbjct: 136 IRGEPRVAVAYFGDGASNIGAFHESLNMAAVWKLPVIFVCQNNGYAEHTKYAYGTSVPNI 195 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + R V++ +PG+ V+G D A+ +AV R GP +IE T+R+ GH + DP Y Sbjct: 196 ALRAVAYQMPGVTVNGNDPIAMHKAASEAVERARNGGGPTLIEANTFRFHGHVLGDPDAY 255 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 + E + DP+ R+ L+ + A+E L +E + + +VEF S + PD Sbjct: 256 MDKHEKAAWVAK-DPVPLFRQWLIDARHANEEQLAAMEADHETQLQAAVEFMLSSEYPDV 314 Query: 356 AELYSDIL 363 AEL D+ Sbjct: 315 AELQRDVF 322 >gi|83944031|ref|ZP_00956488.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alphas ubunit [Sulfitobacter sp. EE-36] gi|83845278|gb|EAP83158.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alphas ubunit [Sulfitobacter sp. EE-36] Length = 319 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 106/318 (33%), Positives = 167/318 (52%), Gaps = 12/318 (3%) Query: 56 YRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 YR M+ RRF+E ++Y G + G HL GQE V VG+ LT D + Sbjct: 2 YRNMVTSRRFDEAIAKIYFEGKSPAFNMANGPIPGEMHLSDGQEPVAVGVCAHLTPEDVV 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +R H +A GVD K+ AE+ G++ G+S G+GG MH+F N + GI+ + Sbjct: 62 TATHRPHHQAIAKGVDLDKMAAEIFGKKTGLSGGRGGHMHLFD-DNVNFACSGIIAQGMG 120 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A + K + + V G+GA NQG +E+ N+AA+WNL I V+E+N + + + Sbjct: 121 PAVGAALSRKMQGKPGVAVAFVGEGAVNQGGWHEAMNLAAVWNLPFICVVEDNGWGISVA 180 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++ IPG +++G D A+ +A+A RA +GP ++E TYR Sbjct: 181 KETASSIGSHADRAAAYGIPGKRIEGNDPYAIFEAAGEAIARARAGEGPSLLECETYRLA 240 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH M D YR E + + DPI ++R+RLL ASE DL IE ++ +++ Sbjct: 241 GHFMGDAEAYRPEREKDALFEK-DPIPKMRERLLAEGAASEADLDTIEEESAARVDAAIK 299 Query: 346 FAQSDKEPDPAELYSDIL 363 FA+ + P + + + Sbjct: 300 FARESDDAAPEDALTRVF 317 >gi|319796364|ref|YP_004158004.1| pyruvate dehydrogenase (acetyL-transferring) [Variovorax paradoxus EPS] gi|315598827|gb|ADU39893.1| Pyruvate dehydrogenase (acetyl-transferring) [Variovorax paradoxus EPS] Length = 340 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 113/320 (35%), Positives = 163/320 (50%), Gaps = 15/320 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGM------------VGGFCHLCIGQEAVIVGMKMSLTEGD 103 YR M+ IR FE A G+ V G HL GQEAV G+ L D Sbjct: 14 YRTMVRIRAFENAAETASQGGVSAYGQQAGAAAKVRGPLHLSTGQEAVPAGVCAHLRTSD 73 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH LA G D +++M EL G+ G + GKGGSMH+ G G +G+V A Sbjct: 74 YLTSTHRGHGHTLAKGADLTRMMCELFGKATGFNGGKGGSMHIADFSVGMLGANGVVAAG 133 Query: 164 VSLGTGIAFANKY-RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + + G A A K ++SD I V FGDGA N+G E+ N A ++ L V++V E+N+++ Sbjct: 134 LPIAVGAAHAQKLLKKSDDITVCFFGDGAINRGPFLEALNWARVYELPVLFVCEDNRWSA 193 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T+ +A S R +S +I QVDG D+ AV + V R+ GP ++ LTY Sbjct: 194 TTASGPMTAGDGASARAMSMDIAATQVDGNDVFAVHEAAARLVKEVRSGAGPRLLHALTY 253 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R +GH D A YR E+ DPI + R LL + S L EIE R ++ Sbjct: 254 RVKGHVSVDLAAYRDPAELAAALET-DPIARTRGHLL-SAGVSAATLDEIENAARDEVDT 311 Query: 343 SVEFAQSDKEPDPAELYSDI 362 ++ A + PD + ++D+ Sbjct: 312 ALAIADAAPWPDASAAFTDV 331 >gi|120401926|ref|YP_951755.1| pyruvate dehydrogenase [Mycobacterium vanbaalenii PYR-1] gi|119954744|gb|ABM11749.1| Pyruvate dehydrogenase (acetyl-transferring) [Mycobacterium vanbaalenii PYR-1] Length = 324 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 104/314 (33%), Positives = 168/314 (53%), Gaps = 14/314 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 L YR M LIR +EE + Y G + G HLC GQE V G L Sbjct: 7 LELYRTMRLIRTYEEAILREYHADKKPSFDIAKGQIPGEMHLCTGQEPVPAGFGPHLRRD 66 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + +R HG LA GVD ++ AE+ GR G+ KG+GG MH+F ++ + GI+ Sbjct: 67 DAVTGPHRPHGWALAKGVDIERMTAEIFGRIDGLGKGRGGHMHLFD-QDAHFSCSGIIAE 125 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + G+A A K + SD++ + G+GAANQG +ES N+AALW L V++++E+N + + Sbjct: 126 GLPTAVGMALAFKKQGSDRVAIAVTGEGAANQGAFHESLNLAALWKLPVVFIVEDNGWGV 185 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 S ++++ + + R V++ +PG+ V + A+ A +A++ RA GP +IE T Sbjct: 186 SVSKAQSTCIESNADRAVAYGMPGVLVKDNAVEAIYAVAGEAISRARAGGGPTLIEAETL 245 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH DP YR +++ + + DP+ +L + S+ + E+ + + + Sbjct: 246 RLWGHFEGDPQLYRA--DLDGV-AALDPVPAYEAQLRADSVLSDDIVHEVTNWAVERVES 302 Query: 343 SVEFAQSDKEPDPA 356 ++ FA+S EPDPA Sbjct: 303 AIAFAKSSPEPDPA 316 >gi|296282766|ref|ZP_06860764.1| dehydrogenase, E1 component [Citromicrobium bathyomarinum JL354] Length = 309 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 101/260 (38%), Positives = 139/260 (53%), Gaps = 1/260 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M IR FEE+ + G V GF HL GQEAV VG+ L D++++ +R HGH LA Sbjct: 1 MATIRAFEERLHDVIATGEVAGFTHLYCGQEAVAVGVCEHLDTEDKIVSTHRGHGHCLAK 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G D +M E+ G G+ KGKGGSMH+ G G +GIVGA + G A +NK Sbjct: 61 GCDVQGMMKEIWGSTEGLCKGKGGSMHIADVDKGMLGANGIVGAGAPIAVGAALSNKLDG 120 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN-FSK 237 ++ + GDGA NQG +E+ N+A + N I+V ENN Y+ T A N + Sbjct: 121 EGRVAIAFSGDGACNQGTTFEAMNMAVVTNAPCIFVFENNHYSEHTGDDYAVGTANDIAS 180 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 R +F + + DG D AV TM + + Y RA GP +E T R+ GH DP NYR Sbjct: 181 RAEAFGMRVWRADGCDFFAVYETMRELLEYVRAGNGPAAVEFDTERFYGHFEGDPQNYRG 240 Query: 298 REEINEMRSNHDPIEQVRKR 317 E++ +R D ++ R+R Sbjct: 241 DGELDRIRKERDCLQIFRRR 260 >gi|83954581|ref|ZP_00963292.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Sulfitobacter sp. NAS-14.1] gi|83840865|gb|EAP80036.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Sulfitobacter sp. NAS-14.1] Length = 319 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 106/318 (33%), Positives = 167/318 (52%), Gaps = 12/318 (3%) Query: 56 YRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 YR M+ RRFEE ++Y G + G HL GQE V VG+ LT D + Sbjct: 2 YRNMVTSRRFEEAIAKIYFEGKSPAFNMANGPIPGEMHLSDGQEPVAVGVCAHLTPEDVV 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +R H +A GVD K+ AE+ G++ G+S G+GG MH+F N + GI+ + Sbjct: 62 TATHRPHHQAIAKGVDLDKMAAEIFGKKTGLSGGRGGHMHLFD-DNVNFACSGIIAQGMG 120 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A + + + + V G+GA NQG +E+ N+AA+WNL I V+E+N + + + Sbjct: 121 PAVGAALSRRMQGKPGVAVAFVGEGAVNQGGWHEAMNLAAVWNLPFICVVEDNGWGISVA 180 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++ IPG +++G D A+ +A+A RA +GP ++E TYR Sbjct: 181 KETASSIGSHADRAAAYGIPGKRIEGNDPYAIFEAAGEAIARARAGEGPSLLECETYRLA 240 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH M D YR E + + DPI ++R+RLL ASE DL IE ++ +++ Sbjct: 241 GHFMGDAEAYRPEGEKDALFEK-DPIPKMRERLLAEGAASEADLNTIEEESAARVDAAIK 299 Query: 346 FAQSDKEPDPAELYSDIL 363 FA+ + P + + + Sbjct: 300 FARESDDAAPEDALTRVF 317 >gi|148555185|ref|YP_001262767.1| pyruvate dehydrogenase [Sphingomonas wittichii RW1] gi|148500375|gb|ABQ68629.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphingomonas wittichii RW1] Length = 324 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 155/300 (51%), Gaps = 1/300 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + ++E+ + AYR M IR+FEE+ + G + GF HL GQEAV VG+ L D + Sbjct: 2 QLSREELVGAYRRMATIRQFEERLHEEIKTGEIAGFTHLYAGQEAVAVGICDQLGVEDMI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ++ +R HGH +A G D +M E+ GR GG KG+GGSMH+ G G +GIVG Sbjct: 62 VSTHRGHGHCIAKGCDVKAMMQEIFGRAGGTCKGRGGSMHIADLSVGMLGANGIVGGGAP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A A + ++ + GDGA NQG +E+ N+A + I+V ENN Y+ T Sbjct: 122 QAVGAALAARLDGKGRVAIAFSGDGACNQGTTFEAMNMAVVTKAPAIFVFENNHYSEHTG 181 Query: 226 VSRASAQT-NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + A + + R +F + + +G D TM + + + RA GP IE+ T R+ Sbjct: 182 DAYAVGTARDIASRAEAFGMKAWRANGCDYFDTYETMRELLDHVRAGNGPAAIELDTERF 241 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH DP YR + E++ +R D ++ R ++ K DL ++ V +I +V Sbjct: 242 FGHFEGDPQRYRGKGELDRIREERDCLKAFRAKVAEAKLLDPADLDAVDAEVAALIEAAV 301 >gi|240171240|ref|ZP_04749899.1| hypothetical protein MkanA1_18146 [Mycobacterium kansasii ATCC 12478] Length = 312 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 97/276 (35%), Positives = 150/276 (54%), Gaps = 1/276 (0%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 GQEA+ M + L DQ++T YR ++ GV +I E+ GR G S+GKGG+MH+ Sbjct: 29 GQEAIAAAMGVVLRTDDQLVTTYRGLHDLIGKGVRLQEIFGEMMGRTVGASRGKGGTMHI 88 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 + + G GIVGA + G+A A K + D++ VV FGDGA N G +E+ N+AAL Sbjct: 89 ANPEVGVMLSTGIVGAGPPVAVGLALAGKRKGLDRVTVVSFGDGATNTGSFHEAANMAAL 148 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 W+L +++V +NN+YA T S + + R + +PG+ VDG D AV + +D+AV Sbjct: 149 WDLPLVFVCQNNRYAEMTPTSATMKLEHVADRAAGYGMPGVAVDGNDPLAVVSALDQAVD 208 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASE 326 RA GP IE +T+R+RGH D Y ++++ + DP+ + R LL E Sbjct: 209 AARAGSGPTFIECVTFRFRGHYFGDRMAYIPKDQLAAAMAT-DPVPRFRNHLLEAGICGE 267 Query: 327 GDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +L I+ + I+ ++ + P EL D+ Sbjct: 268 DELSRIDDDALHIVETALSAVLNADSPSADELERDV 303 >gi|206895459|ref|YP_002247669.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Coprothermobacter proteolyticus DSM 5265] gi|206738076|gb|ACI17154.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Coprothermobacter proteolyticus DSM 5265] Length = 329 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 110/323 (34%), Positives = 170/323 (52%), Gaps = 9/323 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E + Y M+L+R+ EEK + G V +GQEA+ VG +L D Sbjct: 2 LSNEDLIEMYEKMVLLRQAEEKLVEQSSKGKVWTLL-AGVGQEAIPVGTVKALGPEDYWE 60 Query: 107 TAYREHGHILA-CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ++R A GVD ++ AE+ GR G SKGKGG+MH+ + + IVG + Sbjct: 61 ISHRGTSDAAARDGVDLKRLFAEVHGRATGYSKGKGGNMHVEAFEAKVLPMLSIVGESIP 120 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G+A A K + + + FGDGA+NQG +E N+A +W L V+Y+++NNQYA+ T Sbjct: 121 VSAGVALAQKMKNTGGATICFFGDGASNQGVFHEGLNLATIWRLPVVYLVQNNQYAVSTP 180 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S A + N S+R + IPG+ +DG D+ AV + +A+ + +GP +IE +TYR+ Sbjct: 181 ASYAVSVKNISERAKGYGIPGVTIDGNDVLAVYEAVSEALKRAKEGEGPTLIEAITYRWY 240 Query: 286 GHSMSDPAN------YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 GH A+ YR E E DP+ K+L+ +E +I V K Sbjct: 241 GHHAGAGADEQMGWIYRPE-EEVEEWKKKDPVANFEKKLMAQGILTEEKKTQIWDKVNKQ 299 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 + +VEFA+S PDP+E ++D+ Sbjct: 300 VEEAVEFAESSPFPDPSEAFTDV 322 >gi|226361898|ref|YP_002779676.1| acetoin dehydrogenase E1 component alpha subunit [Rhodococcus opacus B4] gi|226240383|dbj|BAH50731.1| putative acetoin dehydrogenase E1 component alpha subunit [Rhodococcus opacus B4] Length = 352 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 1/308 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YRLM+ + ++ Q G + + G EAV + LT D++++ YR G Sbjct: 36 YRLMVTTTLADNRSTQEAKAGRLQAAFYPVRGMEAVCAALGAVLTPQDRLVSTYRNLGDA 95 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA GV IMAEL GR G SKGKGG MH+ T GF GIVG+ + + G+A AN+ Sbjct: 96 LAKGVTLRSIMAELYGRIDGTSKGKGGPMHLHDTAVGFMATTGIVGSGLPIAVGLALANQ 155 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 VV FGD A + G +E+ N AALW L ++++ +NNQ+ T ++ + Sbjct: 156 LDGGGAATVVTFGDAATSIGAYHEAMNFAALWKLPIVFICQNNQWGEHTPIAEYAPSVEL 215 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 +KR ++++P +VDG D A ++ AV R + GP +E +TYR GHS + +Y Sbjct: 216 AKRASAYSMPAERVDGFDALATMHAIETAVERARRNDGPTFLECVTYRLTGHSGTADFSY 275 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R+E+ DP R L+ + ++ ++ + ++ +FA++ P Sbjct: 276 VPRDELGAAM-QRDPAPTFRSWLIDRGLTTAERIEALDREAEAYVLDAFQFAENSPLPHE 334 Query: 356 AELYSDIL 363 EL++D+ Sbjct: 335 DELFTDVF 342 >gi|114561507|ref|YP_749020.1| dehydrogenase, E1 component [Shewanella frigidimarina NCIMB 400] gi|114332800|gb|ABI70182.1| dehydrogenase, E1 component [Shewanella frigidimarina NCIMB 400] Length = 324 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 112/315 (35%), Positives = 169/315 (53%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++EQ L AYR M IR FEE+ + + G + GF HL G+E V + L D + + Sbjct: 4 DREQLLEAYRQMRTIREFEERLHKEFTTGQIPGFVHLYAGEETSAVAVCQQLNNEDHIAS 63 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH +A G D +M E+ GR G+ GKGGSMH+ G G +GIVG L Sbjct: 64 THRGHGHCIAKGCDVMGMMKEIYGRAEGLCAGKGGSMHIADLDKGMLGANGIVGGGGPLA 123 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A ++K R +D + V FGDGA NQG + ES N A++ L V++V+E+N YA T+ + Sbjct: 124 CGAALSSKVRGTDGVAVAFFGDGAFNQGTILESMNFASVNQLPVLFVLEDNGYAESTASA 183 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + R F I G +VDG D AV +AV RA GP I + RY GH Sbjct: 184 WSMGGHDPVARAAGFGIKGKKVDGHDYFAVYRAAKEAVDAMRAGLGPRFIAIEFTRYYGH 243 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 D YR E+ + R+ D ++ R R+ + + +L I+ V+ +I+ +V+ A Sbjct: 244 FEGDATTYRPPGEVRDERTYLDALKFFRARVTGGEMLTVVELDAIDDEVKTLIDAAVDEA 303 Query: 348 QSDKEPDPAELYSDI 362 ++ + P+ +L +D+ Sbjct: 304 KAAEIPNIDQLTTDV 318 >gi|89902723|ref|YP_525194.1| pyruvate dehydrogenase (lipoamide) [Rhodoferax ferrireducens T118] gi|89347460|gb|ABD71663.1| Pyruvate dehydrogenase (lipoamide) [Rhodoferax ferrireducens T118] Length = 356 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 109/333 (32%), Positives = 167/333 (50%), Gaps = 19/333 (5%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLY-----------------GMGMVGGFCHLCIGQEA 90 + E+ L Y M+ IR +EE +Y G G V G HL GQE Sbjct: 25 SPEKLLWMYETMVEIRNYEETMANVYLEGKLPPQIQKGLAFDIGSGPVPGEMHLAAGQEP 84 Query: 91 VIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK 150 V VG+ L + D ++ +R H +A GV K+ AE+ G+ G+ KGKGG MH+F + Sbjct: 85 VAVGVCAHLKKEDTVVGTHRPHHFAIAKGVPLDKMTAEMFGKVTGLGKGKGGHMHLFDPE 144 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 + F GI+GA + G A K D + V FG+GAANQG +ES N+AALW L Sbjct: 145 HKF-SCSGIIGASLPPACGAGLAAKKMGEDWVAVAFFGEGAANQGSFHESLNLAALWRLP 203 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 VI+V E+N +A+ S A++ + R ++ IPG++V D V + A+ R Sbjct: 204 VIFVCEDNNWAISVPKSNATSIEWVADRASAYGIPGIKVANNDALEVYEAVAPAIERARL 263 Query: 271 HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 +GP +IE+ T RY GH DP YR ++E++ +R N DPI ++ L ++ + Sbjct: 264 GEGPSLIEVKTDRYLGHFQGDPEVYRPKDEVSNLRKN-DPIPKLAALLKSRGLMTDAEEG 322 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 I ++ + + FA+ P + +D+ Sbjct: 323 VIVARAKERVAGAFAFARQSAYPAAQDALNDVF 355 >gi|145595014|ref|YP_001159311.1| dehydrogenase, E1 component [Salinispora tropica CNB-440] gi|145304351|gb|ABP54933.1| dehydrogenase, E1 component [Salinispora tropica CNB-440] Length = 323 Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 117/304 (38%), Positives = 170/304 (55%), Gaps = 11/304 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR + LIRRFEE+A +L G + G H +GQE + G+ +L D + +R HGH+ Sbjct: 10 YRTVRLIRRFEERAIELVRSGHIVGGIHPYVGQEGIAAGVCAALRPDDVVAGTHRGHGHV 69 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D +++MAEL GR G+++G+GGSMH G G + IVGA ++ TG +A + Sbjct: 70 LAKGADPARMMAELCGRVTGLNRGRGGSMHAADFAVGVLGANAIVGAGGAIVTGAVWARR 129 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R D + V GDGA N+G + E+FN+AALW + V++V ENN YA V+ A A + Sbjct: 130 RRGDDLVGVSFLGDGAVNEGMLLEAFNLAALWRVPVLFVCENNGYATTMPVADAVAGS-I 188 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-- 293 R +F I VDG D AV+AT A+ RA GP +E TYR+ H + A Sbjct: 189 PARAEAFGIRTSVVDGQDPAAVQATTAAALTRMRAGGGPEFLEAQTYRFDAHHTFEHAVR 248 Query: 294 -NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 +YR+ EE+ RS DP+ RL S + +++ +V +++ +V A + E Sbjct: 249 LDYRSVEEVERGRSR-DPVRIAGSRL------SATERAKVDADVEAVLDAAVAEALAAPE 301 Query: 353 PDPA 356 PDPA Sbjct: 302 PDPA 305 >gi|317124497|ref|YP_004098609.1| pyruvate dehydrogenase (acetyl-transferring) [Intrasporangium calvum DSM 43043] gi|315588585|gb|ADU47882.1| Pyruvate dehydrogenase (acetyl-transferring) [Intrasporangium calvum DSM 43043] Length = 324 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 109/313 (34%), Positives = 166/313 (53%), Gaps = 18/313 (5%) Query: 56 YRLMLLIRRFEE----------KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 Y M+ IR FEE K G G++ G HL GQE V G+ L D + Sbjct: 10 YTTMVQIRAFEEAILADYHADKKPAWDIGAGLIPGEMHLSAGQEPVAAGVCAHLDNRDAV 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +R H +A G+D +K+ AE+ GR+ G+ +G+GG MH+F F GI+ Sbjct: 70 TATHRPHHFAIAHGMDLNKLAAEIYGRETGLGRGRGGHMHLFDPMTHF-SCSGIIAEGYP 128 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A A K + + I V G+GAANQG +ES N+AALWNL V++V+E+N +A+ S Sbjct: 129 PALGQALAFKRQGTGAIAVAVTGEGAANQGAFHESLNLAALWNLPVVFVVEDNDWAI--S 186 Query: 226 VSRASAQTNFSK--RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V RA++ + S R ++ IPG++V+ + V D+AV R+ GP +IE+ T R Sbjct: 187 VPRAASTSVMSNADRAAAYGIPGVRVEDNAVEGVYDAADEAVQRARSGGGPTLIEVHTLR 246 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GH D YR E+ E+ + DPI ++L+ + E ++E+ R+ + + Sbjct: 247 LWGHFEGDAQAYRP--ELAEVPAR-DPIPTYEQQLIADAVLDETKVEELRAEARQRVEAA 303 Query: 344 VEFAQSDKEPDPA 356 +EFA+S PDP+ Sbjct: 304 LEFAKSSPTPDPS 316 >gi|254695183|ref|ZP_05157011.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella abortus bv. 3 str. Tulya] gi|261215541|ref|ZP_05929822.1| dehydrogenase E1 component [Brucella abortus bv. 3 str. Tulya] gi|260917148|gb|EEX84009.1| dehydrogenase E1 component [Brucella abortus bv. 3 str. Tulya] Length = 729 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 110/297 (37%), Positives = 157/297 (52%), Gaps = 24/297 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH------ 112 M LIR FEEK +L G G+V G H IGQE VG +S+ DQ+ ++R H Sbjct: 38 MHLIRAFEEKVLELAGQGLVHGPAHSAIGQEGGAVGSAVSMRPSDQINGSHRAHHQFLAK 97 Query: 113 --GHILACGVD------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 G++ G+D A + +AE+ G G +G+GGSMH+ ++G G + Sbjct: 98 ALGYVAQKGIDPKAAFDQDIRTLAQRTLAEILGLSQGFCRGRGGSMHLRWAESGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V + G A+A++ I FGDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPMAAGAAWAHRRAGKGDIVYTYFGDGATNIGSVLETMNLAAAWKLPICFFIENN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V +A+ S RG++F IP +VDGMD AV ++A A RA GP IIE Sbjct: 218 RYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIAVWLASEEANAIMRAGNGPTIIE 277 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 YRY + P + YR+++E E R DP++ + K LL + E +K + Sbjct: 278 ADVYRYFHQNGPLPGSAFGYRSKDEEAEWR-GRDPLDALAKTLLERQALGEDAIKAL 333 >gi|258653481|ref|YP_003202637.1| pyruvate dehydrogenase [Nakamurella multipartita DSM 44233] gi|258556706|gb|ACV79648.1| Pyruvate dehydrogenase (acetyl-transferring) [Nakamurella multipartita DSM 44233] Length = 724 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 113/331 (34%), Positives = 164/331 (49%), Gaps = 31/331 (9%) Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 LIR FEE+ L G ++ G H IGQE VG + L GDQ+ ++R H LA + Sbjct: 40 LIRAFEEEVLVLAGQKLINGPAHSSIGQEGGAVGSVLPLGAGDQVNGSHRGHHQFLAKAL 99 Query: 121 D-------------ASKI-------MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 + K+ M+E+ G G +G+GGSMH+ + G G + IV Sbjct: 100 GFVAPDGLNPREPLSDKVREVLHRSMSEIAGLSDGYCRGRGGSMHLQWIEAGGMGTNAIV 159 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 G V G AFA+K+ + + V FGDGA N G V E+ N+AA W L V + IENNQY Sbjct: 160 GGAVPFAAGFAFADKHADTTNVSVTYFGDGAVNIGSVLETMNLAAAWKLPVCFFIENNQY 219 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ T+V A+ S RG+ F IP +VDGMD AV M +A+ R GP +IE+ Sbjct: 220 AVSTTVQEATGDDRLSARGLGFGIPSWKVDGMDTVAVYLAMQQALEVMRHGNGPTVIEVD 279 Query: 281 TYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 TYRY + P + YR+++E R + DPI ++ LL +E +L + +++ Sbjct: 280 TYRYFHQNGPFPGSAFGYRSKDEEQSWR-DRDPIAKLEGHLLRRGLYTEAELTGVRKSIK 338 Query: 338 KIINN-SVEFAQSDKEPDP------AELYSD 361 + + + D P EL+ D Sbjct: 339 AALGEIGAQLVEQDPNGKPGQQRIRPELWPD 369 >gi|293602115|ref|ZP_06684568.1| 3-methyl-2-oxobutanoate dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292819517|gb|EFF78545.1| 3-methyl-2-oxobutanoate dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 727 Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 102/304 (33%), Positives = 160/304 (52%), Gaps = 24/304 (7%) Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 IR FEE L G+V G H +GQE VG ++L GDQ+ ++R H LA + Sbjct: 41 IRAFEEAVLDLAAEGLVHGPAHSSVGQEGGAVGSVLALGAGDQINGSHRGHHQFLAKALQ 100 Query: 122 --------------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 K +AE+ G G +G+GGSMH+ + G G + IVG Sbjct: 101 HVAPQGLNPLDPLTPAIDEVLQKTLAEIMGLAQGYCRGRGGSMHLRWLEAGALGTNAIVG 160 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 V L G +A+K+ +D++ V FGDGA N G V E+ N+ A W + + IENN+YA Sbjct: 161 GGVPLAAGAGWAHKHAGTDRVAVTYFGDGAVNIGSVLETMNLTAAWKTPLCFFIENNRYA 220 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T+V ++A+ S RG+ FNIP +VDGMD AV M +AVA+ RA KGP I+E+ Sbjct: 221 VSTTVEESTAEPRLSARGLGFNIPSWKVDGMDPLAVYLAMSEAVAHMRAGKGPTIVEVDV 280 Query: 282 YRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 YR+ + P + YRT++E ++ R DP++++ ++ ++ + + + Sbjct: 281 YRFFHQNGPFPGSAFGYRTKDEESQWR-QRDPLDKIATEMIGRSLITQAQVDALRQRCKD 339 Query: 339 IINN 342 ++ + Sbjct: 340 VMKD 343 >gi|17988405|ref|NP_541038.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella melitensis bv. 1 str. 16M] gi|254691520|ref|ZP_05154774.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella abortus bv. 6 str. 870] gi|256042961|ref|ZP_05445907.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella melitensis bv. 1 str. Rev.1] gi|256112064|ref|ZP_05453000.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella melitensis bv. 3 str. Ether] gi|260564195|ref|ZP_05834680.1| dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|260757145|ref|ZP_05869493.1| dehydrogenase E1 component [Brucella abortus bv. 6 str. 870] gi|265989393|ref|ZP_06101950.1| dehydrogenase E1 component [Brucella melitensis bv. 1 str. Rev.1] gi|265993507|ref|ZP_06106064.1| dehydrogenase E1 component [Brucella melitensis bv. 3 str. Ether] gi|17984186|gb|AAL53302.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella melitensis bv. 1 str. 16M] gi|260151838|gb|EEW86931.1| dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|260677253|gb|EEX64074.1| dehydrogenase E1 component [Brucella abortus bv. 6 str. 870] gi|262764377|gb|EEZ10409.1| dehydrogenase E1 component [Brucella melitensis bv. 3 str. Ether] gi|263000062|gb|EEZ12752.1| dehydrogenase E1 component [Brucella melitensis bv. 1 str. Rev.1] Length = 729 Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 109/297 (36%), Positives = 157/297 (52%), Gaps = 24/297 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH------ 112 M LIR FEEK +L G G+V G H IGQE VG +S+ DQ+ ++R H Sbjct: 38 MHLIRAFEEKVLELAGQGLVHGPAHSAIGQEGGAVGSAVSMRPSDQINGSHRAHHQFLAK 97 Query: 113 --GHILACGVD------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 G++ G+D A + +AE+ G G +G+GGSMH+ ++G G + Sbjct: 98 ALGYVAQKGIDPKAAFDQDIRTLAQRTLAEILGLSQGFCRGRGGSMHLRWAESGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V + G A+A++ + FGDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPMAAGAAWAHRRAGKGDVVYTYFGDGATNIGSVLETMNLAAAWKLPICFFIENN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V +A+ S RG++F IP +VDGMD AV ++A A RA GP IIE Sbjct: 218 RYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIAVWLASEEANAIMRAGNGPTIIE 277 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 YRY + P + YR+++E E R DP++ + K LL + E +K + Sbjct: 278 ADVYRYFHQNGPLPGSAFGYRSKDEEAEWR-GRDPLDALAKTLLERQALGEDAIKAL 333 >gi|163844230|ref|YP_001621885.1| hypothetical protein BSUIS_B0034 [Brucella suis ATCC 23445] gi|256059716|ref|ZP_05449911.1| hypothetical protein Bneo5_05120 [Brucella neotomae 5K33] gi|261323693|ref|ZP_05962890.1| dehydrogenase E1 component [Brucella neotomae 5K33] gi|294853062|ref|ZP_06793734.1| 2-oxoisovalerate dehydrogenase E1 component [Brucella sp. NVSL 07-0026] gi|163674953|gb|ABY39063.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|261299673|gb|EEY03170.1| dehydrogenase E1 component [Brucella neotomae 5K33] gi|294818717|gb|EFG35717.1| 2-oxoisovalerate dehydrogenase E1 component [Brucella sp. NVSL 07-0026] Length = 729 Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 109/297 (36%), Positives = 157/297 (52%), Gaps = 24/297 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH------ 112 M LIR FEEK +L G G+V G H IGQE VG +S+ DQ+ ++R H Sbjct: 38 MHLIRAFEEKVLELAGQGLVHGPAHSAIGQEGGAVGSAVSMRPSDQINGSHRAHHQFLAK 97 Query: 113 --GHILACGVD------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 G++ G+D A + +AE+ G G +G+GGSMH+ ++G G + Sbjct: 98 ALGYVAQKGIDPKAAFDQDIRTLAQRTLAEILGLSQGFCRGRGGSMHLRWAESGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V + G A+A++ + FGDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPMAAGAAWAHRRAGKGDVVYTYFGDGATNIGSVLETMNLAAAWKLPICFFIENN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V +A+ S RG++F IP +VDGMD AV ++A A RA GP IIE Sbjct: 218 RYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIAVWLASEEANAIMRAGNGPTIIE 277 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 YRY + P + YR+++E E R DP++ + K LL + E +K + Sbjct: 278 ADVYRYFHQNGPLPGSAFGYRSKDEEAEWR-GRDPLDALAKTLLERQALGEDAIKAL 333 >gi|23499799|ref|NP_699239.1| acetoin dehydrogenase, alpha/subunit beta [Brucella suis 1330] gi|23463365|gb|AAN33244.1| acetoin dehydrogenase, alpha/beta subunit, putative [Brucella suis 1330] Length = 729 Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 109/297 (36%), Positives = 157/297 (52%), Gaps = 24/297 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH------ 112 M LIR FEEK +L G G+V G H IGQE VG +S+ DQ+ ++R H Sbjct: 38 MHLIRAFEEKVLELAGQGLVHGPAHSAIGQEGGAVGSAVSMRPSDQINGSHRAHHQFLAK 97 Query: 113 --GHILACGVD------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 G++ G+D A + +AE+ G G +G+GGSMH+ ++G G + Sbjct: 98 ALGYVAQKGIDPKAAFDQDIRTLAQRTLAEILGLSQGFCRGRGGSMHLRWAESGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V + G A+A++ + FGDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPMAAGAAWAHRRAGKGDVVYTYFGDGATNIGSVLETMNLAAAWKLPICFFIENN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V +A+ S RG++F IP +VDGMD AV ++A A RA GP IIE Sbjct: 218 RYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIAVWLASEEANAIMRAGNGPTIIE 277 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 YRY + P + YR+++E E R DP++ + K LL + E +K + Sbjct: 278 ADVYRYFHQNGPLPGSAFGYRSKDEEAEWR-GRDPLDALAKTLLERQALGEDAIKAL 333 >gi|256014827|ref|YP_003104836.1| acetoin dehydrogenase, alpha/beta subunit, putative [Brucella microti CCM 4915] gi|255997487|gb|ACU49174.1| acetoin dehydrogenase, alpha/beta subunit, putative [Brucella microti CCM 4915] Length = 729 Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 109/297 (36%), Positives = 157/297 (52%), Gaps = 24/297 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH------ 112 M LIR FEEK +L G G+V G H IGQE VG +S+ DQ+ ++R H Sbjct: 38 MHLIRAFEEKVLELAGQGLVHGPAHSAIGQEGGAVGSAVSMRPSDQINGSHRAHHQFLAK 97 Query: 113 --GHILACGVD------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 G++ G+D A + +AE+ G G +G+GGSMH+ ++G G + Sbjct: 98 ALGYVAQKGIDPKAAFDQDIRMLAQRTLAEILGLSQGFCRGRGGSMHLRWAESGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V + G A+A++ + FGDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPMAAGAAWAHRRAGKGDVVYTYFGDGATNIGSVLETMNLAAAWKLPICFFIENN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V +A+ S RG++F IP +VDGMD AV ++A A RA GP IIE Sbjct: 218 RYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIAVWLASEEANAIMRAGNGPTIIE 277 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 YRY + P + YR+++E E R DP++ + K LL + E +K + Sbjct: 278 ADVYRYFHQNGPLPGSAFGYRSKDEEAEWR-GRDPLDALAKTLLERQALGEDAIKAL 333 >gi|148558786|ref|YP_001257114.1| putative acetoin dehydrogenase, alpha/subunit beta [Brucella ovis ATCC 25840] gi|148370071|gb|ABQ62943.1| putative acetoin dehydrogenase, alpha/beta subunit [Brucella ovis ATCC 25840] Length = 729 Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 109/297 (36%), Positives = 157/297 (52%), Gaps = 24/297 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH------ 112 M LIR FEEK +L G G+V G H IGQE VG +S+ DQ+ ++R H Sbjct: 38 MHLIRAFEEKVLELAGQGLVHGPAHSAIGQEGGAVGSAVSMRPSDQINGSHRAHHQFLAK 97 Query: 113 --GHILACGVD------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 G++ G+D A + +AE+ G G +G+GGSMH+ ++G G + Sbjct: 98 ALGYVAQKGIDPKAAFDQDIRTLAQRTLAEILGLSQGFCRGRGGSMHLRWAESGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V + G A+A++ + FGDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPMAAGAAWAHRRAGKGDVVYTYFGDGATNIGSVLETMNLAAAWKLPICFFIENN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V +A+ S RG++F IP +VDGMD AV ++A A RA GP IIE Sbjct: 218 RYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIAVWLASEEANAIMRAGNGPTIIE 277 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 YRY + P + YR+++E E R DP++ + K LL + E +K + Sbjct: 278 ADVYRYFHQNGPLPGSAFGYRSKDEEAEWR-GRDPLDALAKTLLERQALGEDAIKAL 333 >gi|161620122|ref|YP_001594008.1| dehydrogenase E1 component [Brucella canis ATCC 23365] gi|254702471|ref|ZP_05164299.1| dehydrogenase E1 component [Brucella suis bv. 3 str. 686] gi|260568623|ref|ZP_05839092.1| dehydrogenase [Brucella suis bv. 4 str. 40] gi|261753040|ref|ZP_05996749.1| dehydrogenase E1 component [Brucella suis bv. 3 str. 686] gi|161336933|gb|ABX63237.1| dehydrogenase E1 component [Brucella canis ATCC 23365] gi|260155288|gb|EEW90369.1| dehydrogenase [Brucella suis bv. 4 str. 40] gi|261742793|gb|EEY30719.1| dehydrogenase E1 component [Brucella suis bv. 3 str. 686] Length = 729 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 109/297 (36%), Positives = 157/297 (52%), Gaps = 24/297 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH------ 112 M LIR FEEK +L G G+V G H IGQE VG +S+ DQ+ ++R H Sbjct: 38 MHLIRAFEEKVLELAGQGLVHGPAHSAIGQEGGAVGSAVSMRPSDQINGSHRAHHQFLAK 97 Query: 113 --GHILACGVD------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 G++ G+D A + +AE+ G G +G+GGSMH+ ++G G + Sbjct: 98 ALGYVAQKGIDPKAAFDQDIRTLAQRTLAEILGLSQGFCRGRGGSMHLRWAESGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V + G A+A++ + FGDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPMAAGAAWAHRRAGKGDVVYTYFGDGATNIGSVLETMNLAAAWKLPICFFIENN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V +A+ S RG++F IP +VDGMD AV ++A A RA GP IIE Sbjct: 218 RYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIAVWLASEEANAIMRAGNGPTIIE 277 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 YRY + P + YR+++E E R DP++ + K LL + E +K + Sbjct: 278 ADVYRYFHQNGPLPGSAFGYRSKDEEAEWR-GRDPLDALAKTLLERQALGEDAIKAL 333 >gi|295696959|ref|YP_003590197.1| Pyruvate dehydrogenase (acetyl-transferring) [Bacillus tusciae DSM 2912] gi|295412561|gb|ADG07053.1| Pyruvate dehydrogenase (acetyl-transferring) [Bacillus tusciae DSM 2912] Length = 333 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 115/318 (36%), Positives = 169/318 (53%), Gaps = 12/318 (3%) Query: 56 YRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 Y M+ IR FEE ++Y G G V G HL GQE VG+ L D + Sbjct: 12 YETMVKIRYFEETMVKVYTEGKMPVFNIGAGTVPGEMHLAAGQEPAAVGICAHLRREDTV 71 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +R H H +A GVD ++ AE+ GR+ G+ KGKGG MH+F F GIVGA + Sbjct: 72 TAPHRPHHHAIAKGVDLKRMTAEMFGRKTGLGKGKGGHMHLFDPGVKF-SCSGIVGAGMP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A +NK +D + V G+GAAN G +ES N+AALW L VI VIE+N Y + Sbjct: 131 QAVGAALSNKMNNTDWVAVAFAGEGAANSGAFHESLNLAALWKLPVIMVIEDNAYGISVP 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S+++A N + R ++ IPG V D + ++AV R +GP +IE+ TYRY Sbjct: 191 KSKSTAVANNAIRAAAYGIPGALVKDNDPLEMYRVAEEAVDRARRGEGPTLIEIETYRYL 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR ++E++ +R DPIE++++ ++ A E +L +E ++ ++ + Sbjct: 251 GHFQGDPEVYREKDEVSHLRQK-DPIERLKRYVVEQGVAGEQELAGLEAQAKREVDEAYT 309 Query: 346 FAQSDKEPDPAELYSDIL 363 FA+ P E D+ Sbjct: 310 FARDSAWPRGEEALEDVF 327 >gi|308176831|ref|YP_003916237.1| 2-oxoisovalerate dehydrogenase subunit alpha [Arthrobacter arilaitensis Re117] gi|307744294|emb|CBT75266.1| 2-oxoisovalerate dehydrogenase subunit alpha [Arthrobacter arilaitensis Re117] Length = 324 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 107/319 (33%), Positives = 169/319 (52%), Gaps = 16/319 (5%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKM 97 N ++EL Y+ M++IR +EE + Y G G++ G HL GQE V G+ Sbjct: 4 NTQREL--YQQMVMIRTYEETILREYHADKKPVFDIGAGLIPGEMHLAAGQEPVAAGVCA 61 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 TEGD + +R H LA GV+ + + AE+ GR G+ +G+GG MH+F K F Sbjct: 62 HATEGDSVTATHRPHHFALAHGVEINAMTAEIFGRVDGLGRGRGGHMHLFDPKAKF-SCS 120 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GI+G + + G A A K R ++ + + G+GAANQG +ES N+AALW L VI+V+E+ Sbjct: 121 GIIGEGLPVAVGQALAMKRRGTNNVAIAVAGEGAANQGAFHESLNLAALWKLPVIFVVED 180 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N + + S++++ + + R ++ IPG++V+ + +V KA R GP ++ Sbjct: 181 NDWGISVPRSQSTSVPSNAVRAAAYGIPGVRVEDNAVESVYEEAGKAFERARNGGGPSLL 240 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E+ T R GH D YR+ E R DPI + L + + +++ Sbjct: 241 EVSTLRLWGHFEGDAQGYRSDLEGVPGR---DPIPTYEQTLRDARVIDDSFVEQTRSEAV 297 Query: 338 KIINNSVEFAQSDKEPDPA 356 K + +VEFA+S EPDP+ Sbjct: 298 KRVEAAVEFAKSSPEPDPS 316 >gi|260882955|ref|ZP_05894569.1| dehydrogenase E1 component [Brucella abortus bv. 9 str. C68] gi|260872483|gb|EEX79552.1| dehydrogenase E1 component [Brucella abortus bv. 9 str. C68] Length = 602 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 109/297 (36%), Positives = 157/297 (52%), Gaps = 24/297 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH------ 112 M LIR FEEK +L G G+V G H IGQE VG +S+ DQ+ ++R H Sbjct: 38 MHLIRAFEEKVLELAGQGLVHGPAHSAIGQEGGAVGSAVSMRPSDQINGSHRAHHQFLAK 97 Query: 113 --GHILACGVD------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 G++ G+D A + +AE+ G G +G+GGSMH+ ++G G + Sbjct: 98 ALGYVAQKGIDPKAAFDQDIRTLAQRTLAEILGLSQGFCRGRGGSMHLRWAESGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V + G A+A++ + FGDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPMAAGAAWAHRRAGKGDVVYTYFGDGATNIGSVLETMNLAAAWKLPICFFIENN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V +A+ S RG++F IP +VDGMD AV ++A A RA GP IIE Sbjct: 218 RYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIAVWLASEEANAIMRAGNGPTIIE 277 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 YRY + P + YR+++E E R DP++ + K LL + E +K + Sbjct: 278 ADVYRYFHQNGPLPGSAFGYRSKDEEAEWR-GRDPLDALAKTLLERQALGEDAIKAL 333 >gi|296269723|ref|YP_003652355.1| pyruvate dehydrogenase [Thermobispora bispora DSM 43833] gi|296092510|gb|ADG88462.1| Pyruvate dehydrogenase (acetyl-transferring) [Thermobispora bispora DSM 43833] Length = 324 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 105/314 (33%), Positives = 163/314 (51%), Gaps = 14/314 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 L YR M+LIR FEE + Y G++ G HL GQE V G+ LT Sbjct: 7 LELYRTMVLIRTFEEAIRREYHADKKPVFDIAAGLIPGEMHLAAGQEPVAAGVCAHLTAD 66 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + +R H +A GV+ +++ AE+ GR G+ KG+GG MH+F + F GI+ Sbjct: 67 DAVTATHRPHHFAIAHGVNLNRLAAEIFGRVDGLGKGRGGHMHLFDPETHFSCS-GIIAE 125 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 G A A K R +D+I V G+GAANQG +ES N+AALW L V++++E+N + + Sbjct: 126 GYPPALGQALAFKRRGTDRIAVAVTGEGAANQGAFHESLNLAALWKLPVVFIVEDNDWGI 185 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 S +++ + + R ++ IPG +V+ + AV +A+A RA +GP +IE+ T Sbjct: 186 SVPRSASTSVPSNAVRAAAYGIPGERVEDNSVEAVYRVAGEAIARARAGEGPSLIEVHTV 245 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D YR ++ E+ + DP+ L + +K I + + Sbjct: 246 RLWGHFEGDAQGYRP--DLAEV-AERDPLPIYEAELRRAGVLDDDTVKAIAAEASERVEA 302 Query: 343 SVEFAQSDKEPDPA 356 ++ FA++ EPDPA Sbjct: 303 AIAFAKNSPEPDPA 316 >gi|219119135|ref|XP_002180334.1| precursor of dehydrogenase pyruvate dehydrogenase E1, alpha and beta subunits [Phaeodactylum tricornutum CCAP 1055/1] gi|217408591|gb|EEC48525.1| precursor of dehydrogenase pyruvate dehydrogenase E1, alpha and beta subunits [Phaeodactylum tricornutum CCAP 1055/1] Length = 814 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 115/346 (33%), Positives = 172/346 (49%), Gaps = 24/346 (6%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 +E + + +KE L Y+ M+L R FE Q Y G + GF HL GQE++ + + Sbjct: 89 IEAYNSLDGDKEALLKLYKAMMLARGFENACNQQYMQGKIRGFMHLDNGQESIPGLVDYA 148 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 + D+ + YREH H LA G D IMAEL + G +G GGSMH+F + F GG Sbjct: 149 VKTQDKKFSYYREHTHALASGCDPGAIMAELMMKDTGSCRGAGGSMHIFDKEKYFQGGWA 208 Query: 159 IVGAQVSLGTGIAFANKYRRS--------------------DKICVVCFGDGAANQGQVY 198 +V Q+ G A + R+ D+I VV G+G A G++ Sbjct: 209 LVSEQLPYAAGAAKSILLDRALGLSDDEKIVKGNVAPPADDDRISVVFIGEGGAQNGRMA 268 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 E N A+ NL ++ ++ +N A+ T + +N ++G+ + +PG+ VDG++ V Sbjct: 269 ELLNAASKDNLPLLIIVIDNGRAINTFTPDIARNSNVYQQGLHYGVPGLLVDGLNAVDVA 328 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR-EEINEMRSNHDPIEQVRKR 317 V Y RA KGP I+++ TYR+ GHS +DP + R R EE R+ DPI+ Sbjct: 329 KGGKAVVDYIRAGKGPAILQVHTYRFNGHSPADPEHERGRKEEKAWARNAQDPIKAFEDA 388 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP-DPAELYSDI 362 N +E DLK + + + SVEFA DK P P EL ++ Sbjct: 389 YTANGVFTEDDLKAAKKEILAQVKASVEFA--DKSPMPPVELAKEL 432 >gi|261219904|ref|ZP_05934185.1| dehydrogenase E1 component [Brucella ceti B1/94] gi|261318905|ref|ZP_05958102.1| dehydrogenase E1 component [Brucella pinnipedialis B2/94] gi|261756265|ref|ZP_05999974.1| dehydrogenase [Brucella sp. F5/99] gi|265987092|ref|ZP_06099649.1| dehydrogenase E1 component [Brucella pinnipedialis M292/94/1] gi|265996753|ref|ZP_06109310.1| dehydrogenase E1 component [Brucella ceti M490/95/1] gi|260918488|gb|EEX85141.1| dehydrogenase E1 component [Brucella ceti B1/94] gi|261298128|gb|EEY01625.1| dehydrogenase E1 component [Brucella pinnipedialis B2/94] gi|261736249|gb|EEY24245.1| dehydrogenase [Brucella sp. F5/99] gi|262551050|gb|EEZ07211.1| dehydrogenase E1 component [Brucella ceti M490/95/1] gi|264659289|gb|EEZ29550.1| dehydrogenase E1 component [Brucella pinnipedialis M292/94/1] Length = 523 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 109/297 (36%), Positives = 157/297 (52%), Gaps = 24/297 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH------ 112 M LIR FEEK +L G G+V G H IGQE VG +S+ DQ+ ++R H Sbjct: 38 MHLIRAFEEKVLELAGQGLVHGPAHSAIGQEGGAVGSAISMRPSDQINGSHRAHHQFLAK 97 Query: 113 --GHILACGVD------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 G++ G+D A + +AE+ G G +G+GGSMH+ ++G G + Sbjct: 98 ALGYVAQKGIDPKAAFDQDIRTLAQRTLAEILGLSQGFCRGRGGSMHLRWAESGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V + G A+A++ + FGDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPMAAGAAWAHRRAGKGDVVYTYFGDGATNIGSVLETMNLAAAWKLPICFFIENN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V +A+ S RG++F IP +VDGMD AV ++A A RA GP IIE Sbjct: 218 RYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIAVWLASEEANAIMRAGNGPTIIE 277 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 YRY + P + YR+++E E R DP++ + K LL + E +K + Sbjct: 278 ADVYRYFHQNGPLPGSAFGYRSKDEEAEWR-GRDPLDALAKTLLERQALGEDAIKAL 333 >gi|265998946|ref|ZP_06111500.1| dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|263091366|gb|EEZ15902.1| dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|326410219|gb|ADZ67283.1| Dehydrogenase, E1 component [Brucella melitensis M28] gi|326553512|gb|ADZ88151.1| Dehydrogenase, E1 component [Brucella melitensis M5-90] Length = 552 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 109/297 (36%), Positives = 157/297 (52%), Gaps = 24/297 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH------ 112 M LIR FEEK +L G G+V G H IGQE VG +S+ DQ+ ++R H Sbjct: 38 MHLIRAFEEKVLELAGQGLVHGPAHSAIGQEGGAVGSAVSMRPSDQINGSHRAHHQFLAK 97 Query: 113 --GHILACGVD------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 G++ G+D A + +AE+ G G +G+GGSMH+ ++G G + Sbjct: 98 ALGYVAQKGIDPKAAFDQDIRTLAQRTLAEILGLSQGFCRGRGGSMHLRWAESGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V + G A+A++ + FGDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPMAAGAAWAHRRAGKGDVVYTYFGDGATNIGSVLETMNLAAAWKLPICFFIENN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V +A+ S RG++F IP +VDGMD AV ++A A RA GP IIE Sbjct: 218 RYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIAVWLASEEANAIMRAGNGPTIIE 277 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 YRY + P + YR+++E E R DP++ + K LL + E +K + Sbjct: 278 ADVYRYFHQNGPLPGSAFGYRSKDEEAEWR-GRDPLDALAKTLLERQALGEDAIKAL 333 >gi|254720712|ref|ZP_05182523.1| hypothetical protein Bru83_14630 [Brucella sp. 83/13] gi|265985764|ref|ZP_06098499.1| dehydrogenase E1 component [Brucella sp. 83/13] gi|306839335|ref|ZP_07472151.1| acetoin dehydrogenase, alpha/beta subunit [Brucella sp. NF 2653] gi|264664356|gb|EEZ34617.1| dehydrogenase E1 component [Brucella sp. 83/13] gi|306405583|gb|EFM61846.1| acetoin dehydrogenase, alpha/beta subunit [Brucella sp. NF 2653] Length = 729 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 107/287 (37%), Positives = 153/287 (53%), Gaps = 24/287 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH------ 112 M LIR FEEK +L G G+V G H IGQE VG +S+ DQ+ ++R H Sbjct: 38 MHLIRAFEEKVLELAGQGLVHGPAHSAIGQEGGAVGSAVSMRPSDQINGSHRAHHQFLAK 97 Query: 113 --GHILACGVD------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 G++ G+D A + +AE+ G G +G+GGSMH+ ++G G + Sbjct: 98 VLGYVAQKGIDPKAAFDQDIRTLAQRTLAEILGLSQGFCRGRGGSMHLRWAESGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V + G A+A++ + FGDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPMAAGAAWAHRRAGKGDVVYTYFGDGATNIGSVLETMNLAAAWKLPICFFIENN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V +A+ S RG++F IP +VDGMD AV ++A A RA GP IIE Sbjct: 218 RYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIAVWLASEEANAIMRAGNGPTIIE 277 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNK 322 YRY + P + YR+++E E R DP++ + K LL + Sbjct: 278 ADVYRYFHQNGPLPGSAFGYRSKDEEAEWR-GRDPLDALAKTLLERQ 323 >gi|156098689|ref|XP_001615360.1| pyruvate dehydrogenase E1 component, alpha subunit [Plasmodium vivax SaI-1] gi|148804234|gb|EDL45633.1| pyruvate dehydrogenase E1 component, alpha subunit, putative [Plasmodium vivax] Length = 497 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 110/326 (33%), Positives = 164/326 (50%), Gaps = 43/326 (13%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M L R FE +LY + GF HL GQEA+ G+ +L D + + YR+H H Sbjct: 84 YEDMHLGRMFENLVAKLYYSKRINGFVHLYNGQEAISSGIIKNLRPSDFVTSTYRDHVHA 143 Query: 116 LACGVDASKIMAELTGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 ++ V KI+ EL G G ++GKGGSMH++S F GG G +G Q+ + G+A++ Sbjct: 144 ISKNVPPRKILNELYGNYYGSTNRGKGGSMHIYSKSENFVGGFGFIGEQIPIAVGLAYSI 203 Query: 175 KYRRS-----------------------------------DKICVVCF-GDGAANQGQVY 198 Y+R D V CF GDG AN GQ + Sbjct: 204 LYKREFPQGGAEVRSGAEALSGTEALGGTSSPSGAAPPLEDADVVACFLGDGTANIGQFF 263 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASA---QTNFSKRGVSFNIPGMQVDGMDIR 255 ES N+AA +NL +++VIENN +A+G SR+S Q N+SK G +FNI +VDG D Sbjct: 264 ESLNLAATYNLPILFVIENNNWAIGMEGSRSSTDDLQNNYSK-GKAFNIETYKVDGNDAI 322 Query: 256 AVKATMDKAVAYCRAHK-GPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 ++ K + R + GP++IE +TYR +GHS++DP R EE + DPI + Sbjct: 323 SIYKLAKKKINQMRRRECGPVLIEAITYRAKGHSLADPDELRIHEEKASWKK-RDPIVHL 381 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKII 340 + E ++++ ++I+ Sbjct: 382 ASYMKKKNIVDESFFEQVKKKTKQIL 407 >gi|319763095|ref|YP_004127032.1| pyruvate dehydrogenase (acetyl-transferring) [Alicycliphilus denitrificans BC] gi|317117656|gb|ADV00145.1| Pyruvate dehydrogenase (acetyl-transferring) [Alicycliphilus denitrificans BC] Length = 333 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 103/261 (39%), Positives = 150/261 (57%), Gaps = 2/261 (0%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E+ + YR+M LIR+ E +L+ G V GF HL IGQEAV G+ L D + T + Sbjct: 17 ERLAALYRIMSLIRQVETALTRLFANGEVPGFIHLSIGQEAVAAGVASVLLPQDSLATTH 76 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R HGH+LA G+D + M E+ GR+GG+ KG+GGSMH+ G G +GIVGA + + G Sbjct: 77 RGHGHVLARGMDVTGFMKEIMGREGGLCKGRGGSMHVADLGLGILGANGIVGAGIPIALG 136 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 A A++ R++ + V FGDGA +G ++E+ N+AALW ++ V ENN ++ + SR Sbjct: 137 SAMAHQARKTGGVAVAFFGDGAMAEGVLHETLNMAALWKCPLLLVCENNGWSEFSPTSRQ 196 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 A + +F + +VDG D+ AV +A A RA GP ++E +T R RGH Sbjct: 197 FA-ARLEQLAAAFGVGYAKVDGNDVLAVAGAAGQAAARLRAGDGPFVLECMTTRVRGHFE 255 Query: 290 SDPANYRTREEINEMRSNHDP 310 D YR E+ + + HDP Sbjct: 256 GDAQKYRDAGELESVHA-HDP 275 >gi|254699351|ref|ZP_05161179.1| hypothetical protein Bsuib55_00607 [Brucella suis bv. 5 str. 513] gi|261749797|ref|ZP_05993506.1| dehydrogenase E1 component [Brucella suis bv. 5 str. 513] gi|261739550|gb|EEY27476.1| dehydrogenase E1 component [Brucella suis bv. 5 str. 513] Length = 729 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 108/297 (36%), Positives = 156/297 (52%), Gaps = 24/297 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH------ 112 M LIR FEEK +L G G+V G H IGQE VG +S+ DQ+ ++R H Sbjct: 38 MHLIRAFEEKVLELAGQGLVHGPAHSAIGQEGGAVGSAVSMRPSDQINGSHRAHHQFLAK 97 Query: 113 --GHILACGVDA------------SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 G++ G+D + +AE+ G G +G+GGSMH+ ++G G + Sbjct: 98 ALGYVAQKGIDPKAAFDQDIRTLVQRTLAEILGLSQGFCRGRGGSMHLRWAESGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V + G A+A++ + FGDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPMAAGAAWAHRRAGKGDVVYTYFGDGATNIGSVLETMNLAAAWKLPICFFIENN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V +A+ S RG++F IP +VDGMD AV ++A A RA GP IIE Sbjct: 218 RYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIAVWLASEEANAIMRAGNGPTIIE 277 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 YRY + P + YR+++E E R DP++ + K LL + E +K + Sbjct: 278 ADVYRYFHQNGPLPGSAFGYRSKDEEAEWR-GRDPLDALAKTLLERQALGEDAIKAL 333 >gi|302527684|ref|ZP_07280026.1| pyruvate dehydrogenase E1 component alpha subunit [Streptomyces sp. AA4] gi|302436579|gb|EFL08395.1| pyruvate dehydrogenase E1 component alpha subunit [Streptomyces sp. AA4] Length = 318 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 111/305 (36%), Positives = 170/305 (55%), Gaps = 3/305 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMITAYRE 111 L + M IR FEE+ +L G G + G HLC GQEAV VG +L E D + YR Sbjct: 8 LRHFEAMQRIRSFEEEVARLRGTGDIVGSVHLCNGQEAVYVGACAALDLERDAVFPTYRG 67 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 HG LACG + AEL GRQ GI+ G+GGS ++ + +G YG + IVGA + G A Sbjct: 68 HGWTLACGAPPRALFAELLGRQTGINGGRGGSAYLTAPSHGMYGENSIVGAGAPIAAGAA 127 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A + S ++ + FGDGA NQG V+E+ N AA+ L VI+++ENN Y+ T ++ Sbjct: 128 LAATFDGSGRVSLAAFGDGALNQGAVHEAMNFAAVRRLPVIFLVENNHYSELTPIADMVR 187 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +R ++ +PG ++DG D AV++ + +AV R +GP+++E +T R GH + D Sbjct: 188 IDKLFRRASAYGMPGARIDGNDPEAVRSAVAEAVRRARDGEGPVLLEAMTQRIVGHYIGD 247 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 +YR E+ E + +PI + +LL + ++ ++ I V + I ++ A +D Sbjct: 248 AQHYRPAGEL-EAATAAEPIGALVWQLL-SVGVAQSEVDTIVERVHREIADASAQALADP 305 Query: 352 EPDPA 356 DPA Sbjct: 306 IADPA 310 >gi|158315117|ref|YP_001507625.1| pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EAN1pec] gi|158110522|gb|ABW12719.1| Pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EAN1pec] Length = 332 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 97/278 (34%), Positives = 151/278 (54%), Gaps = 1/278 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y LM L++ +++ + G + GQEA+ + + L DQ++T YR + Sbjct: 18 YELMTLMKAADDRLSKGIASGELQCVYWPSRGQEAIAAAVGVVLRLDDQLVTTYRGLHDL 77 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + GV +I E+ GRQ G +GKGG+MH+ +G GIVGA + G+A A + Sbjct: 78 IGKGVPLVEIYGEMLGRQVGSGRGKGGTMHIAHPDSGLMMSTGIVGAGPPVAVGLAMAAR 137 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + D++ V FGDGA N G +E+ N+AALW+L ++ V +NNQYA T Sbjct: 138 RKGLDRVTVASFGDGATNTGSFHEAANMAALWDLPLVLVCQNNQYAEMTPTGHTMKIAQV 197 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + R + +PG++VDG D AV A +++AV RA GP ++E +T+R+RGH DP Y Sbjct: 198 ADRAAGYGMPGVRVDGNDPLAVVAALEEAVERARAGAGPTLLECVTFRFRGHYFGDPMKY 257 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 E+++ + DP+ + R RLL + +L EIE Sbjct: 258 IPTEQMDAAIAA-DPLPRFRSRLLDDGICGARELDEIE 294 >gi|169335851|ref|ZP_02863044.1| hypothetical protein ANASTE_02277 [Anaerofustis stercorihominis DSM 17244] gi|169258589|gb|EDS72555.1| hypothetical protein ANASTE_02277 [Anaerofustis stercorihominis DSM 17244] Length = 613 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 103/304 (33%), Positives = 162/304 (53%), Gaps = 13/304 (4%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N ++ + + ML +R FEEK LY G + +L IGQEAV G ++ D++ T Sbjct: 4 NNQKIVELFYKMLKVRVFEEKLASLYEEGKIHTNLYLSIGQEAVSAGAMAAINGKDKVFT 63 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 ++R + +D K+ E+ G GG + G G + K YG + VS+ Sbjct: 64 SHRNFAASICLEMDIEKMFREIMGLDGGYTDGVAGPGYFADMKADIYGASAVPAGNVSVA 123 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+A K ++ I V GDGA N+G ES N+A+++ L +IY++ENN YA G S S Sbjct: 124 TGVAMGEKIHHTNNIVVSFIGDGAVNEGVFSESVNMASMFKLPIIYLVENNGYAKGQSFS 183 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + S + + R S++IPG+ VDG ++ + M A +Y R KGPII+E TYR+ GH Sbjct: 184 KTSTVKDIASRASSYSIPGIIVDGNNVLDMYEAMLTASSYVRGGKGPIILEAKTYRFSGH 243 Query: 288 SMSDPANYRTREEINEMRSNHD--PIEQVRKRLLHNKWASEGDLK--------EIEMNVR 337 ++D A YR+ + E+R+ D PI+ + +L N + DL+ E++ + Sbjct: 244 HLADKALYRSSK---ELRAWFDKCPIKLLSNYMLQNMVGIDDDLQMMKDTISAEMDRIIN 300 Query: 338 KIIN 341 KI+N Sbjct: 301 KILN 304 >gi|119900156|ref|YP_935369.1| acetoin dehydrogenase subunit alpha [Azoarcus sp. BH72] gi|119672569|emb|CAL96483.1| probable acetoin dehydrogenase, alpha subunit [Azoarcus sp. BH72] Length = 336 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 111/327 (33%), Positives = 163/327 (49%), Gaps = 19/327 (5%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLY-----------------GMGMVGGFCHLCIGQ 88 E EQ L Y M+ IR +EE ++Y G G V G HL GQ Sbjct: 2 EATAEQLLWMYEKMVEIREYEETMAKVYLEAKLPPKIQKGLAFDIGAGPVPGEMHLAAGQ 61 Query: 89 EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 E V VG+ L D ++ A+R H +A VD + + AE+ G+ G+ +GKGG MH+F Sbjct: 62 EPVAVGVCAHLRRDDTVVGAHRPHHFAIAKDVDLNAMTAEMYGKATGLGRGKGGHMHLFD 121 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 F GIVGA G A A K +D + + FG+GAANQG +E+ N+AALW Sbjct: 122 PAVKF-SCSGIVGAGAPQACGAALAAKKLGTDAVAIAFFGEGAANQGAFHEALNLAALWK 180 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L V++V+E+N+Y + S ++A + + R ++ +PG+ V+ D AV AVA Sbjct: 181 LPVVFVVEDNKYGISVEKSASTAIASNADRAAAYGMPGVLVEKNDAVAVFEAAGVAVARA 240 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 R +GP +IE+ T RY GH DP YR + E E+R HDPI + L + Sbjct: 241 RRGEGPTLIEVKTDRYYGHFQGDPETYRPKGEAKELR-QHDPIPTLGALLRSRDLLDDEA 299 Query: 329 LKEIEMNVRKIINNSVEFAQSDKEPDP 355 + V + + +F ++ P+P Sbjct: 300 DAALRARVSARVQAAYDFGRNSPYPEP 326 >gi|62316992|ref|YP_222845.1| acetoin dehydrogenase subunit alpha/beta [Brucella abortus bv. 1 str. 9-941] gi|83268986|ref|YP_418277.1| transketolase [Brucella melitensis biovar Abortus 2308] gi|189022264|ref|YP_001932005.1| Dehydrogenase, E1 component [Brucella abortus S19] gi|237816555|ref|ZP_04595547.1| acetoin dehydrogenase subunit alpha/beta [Brucella abortus str. 2308 A] gi|254698283|ref|ZP_05160111.1| Dehydrogenase, E1 component [Brucella abortus bv. 2 str. 86/8/59] gi|260544232|ref|ZP_05820053.1| dehydrogenase [Brucella abortus NCTC 8038] gi|260762729|ref|ZP_05875061.1| dehydrogenase E1 component [Brucella abortus bv. 2 str. 86/8/59] gi|62197185|gb|AAX75484.1| hypothetical acetoin dehydrogenase, alpha/beta subunit [Brucella abortus bv. 1 str. 9-941] gi|82939260|emb|CAJ12197.1| Dehydrogenase, E1 component:Transketolase, central region:Transketolase, C terminal [Brucella melitensis biovar Abortus 2308] gi|189020838|gb|ACD73559.1| Dehydrogenase, E1 component [Brucella abortus S19] gi|237787368|gb|EEP61584.1| acetoin dehydrogenase subunit alpha/beta [Brucella abortus str. 2308 A] gi|260097503|gb|EEW81377.1| dehydrogenase [Brucella abortus NCTC 8038] gi|260673150|gb|EEX59971.1| dehydrogenase E1 component [Brucella abortus bv. 2 str. 86/8/59] Length = 729 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 108/297 (36%), Positives = 156/297 (52%), Gaps = 24/297 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH------ 112 M LIR FE K +L G G+V G H IGQE VG +S+ DQ+ ++R H Sbjct: 38 MHLIRAFEAKVLELAGQGLVHGPAHSAIGQEGGAVGSAVSMRPSDQINGSHRAHHQFLAK 97 Query: 113 --GHILACGVD------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 G++ G+D A + +AE+ G G +G+GGSMH+ ++G G + Sbjct: 98 ALGYVAQKGIDPKAAFDQDIRTLAQRTLAEILGLSQGFCRGRGGSMHLRWAESGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V + G A+A++ + FGDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPMAAGAAWAHRRAGKGDVVYTYFGDGATNIGSVLETMNLAAAWKLPICFFIENN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V +A+ S RG++F IP +VDGMD AV ++A A RA GP IIE Sbjct: 218 RYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIAVWLASEEANAIMRAGNGPTIIE 277 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 YRY + P + YR+++E E R DP++ + K LL + E +K + Sbjct: 278 ADVYRYFHQNGPLPGSAFGYRSKDEEAEWR-GRDPLDALAKTLLERQALGEDAIKAL 333 >gi|301061549|ref|ZP_07202311.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [delta proteobacterium NaphS2] gi|300444357|gb|EFK08360.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [delta proteobacterium NaphS2] Length = 323 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 6/310 (1%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E++ + ML IRR +E+ Y + HL IGQEA+ VG+ +L + D + + + Sbjct: 6 EKKKEMFYAMLRIRRIQERIESCYLQDEMKTPVHLYIGQEAIAVGVCSALKKDDYISSNH 65 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R HGH LA G D ++AEL ++ G SKG GGSMH+ T G G IVG + +GTG Sbjct: 66 RSHGHYLAKGGDLRALIAELHCKKEGCSKGYGGSMHLVDTSIGHLGSSSIVGGGIPIGTG 125 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +A A+K ++ V FGDGAA++G +YES N A L L +Y++ENN +++ + VS Sbjct: 126 LALASKMNGGQRVSAVFFGDGAADEGVLYESINFAMLKTLPAVYILENNHWSVCSHVSAR 185 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS- 288 A N + + + ++DG +I AV +A+ R GP +E TYR GH+ Sbjct: 186 KAGDNIFHQALPDLLMSRKIDGNNILAVYQAALEAIERARRGSGPSFLECETYRILGHAG 245 Query: 289 --MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 DP YR E+ + P++ R++LL K + ++ +E+ + I+++ F Sbjct: 246 CESQDPEGYRDCAEVKAWKKKC-PVDNFREQLLKEKTMTPAEITAMEIKIEIEIDDAFAF 304 Query: 347 AQSDKEPDPA 356 A+ K P PA Sbjct: 305 AR--KSPLPA 312 >gi|78779685|ref|YP_397797.1| pyruvate dehydrogenase (lipoamide) [Prochlorococcus marinus str. MIT 9312] gi|78713184|gb|ABB50361.1| Pyruvate dehydrogenase (lipoamide) [Prochlorococcus marinus str. MIT 9312] Length = 347 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 105/322 (32%), Positives = 167/322 (51%), Gaps = 13/322 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + F++++ L M+LIR E K + G+VGG HL +GQEA+ VG+ L D Sbjct: 20 IDNFSRDELLEMLSKMILIRNAEYKIAKGREFGLVGGPVHLGVGQEAIPVGISQYLNNQD 79 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ A+R H HIL+ G+D +E+ + GISKG GGSMH+F GF G IVG Sbjct: 80 KVFGAHRSHSHILSLGIDLKSFFSEILAKSSGISKGMGGSMHLFGGSVGFCGSVPIVGGT 139 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V L G A A+K + + + GDGA +G V+ES N A + N VI+V+ENN ++ Sbjct: 140 VPLAVGTALASKLKEEKVVSISYLGDGAIEEGIVHESLNFARINNCPVIFVVENNLFSSH 199 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 ++ + + + +I +DG ++ ++ T + + CR +GP IE LTYR Sbjct: 200 LNIKLRQPKKLTYRFAKANDIESKVLDGNNLTSICKTGKEFIRRCRDGEGPFFIEALTYR 259 Query: 284 YRGHSMSDPANYRTREEINEMRS--------NHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 + GH ++R ++ RS DPI +++K LL + E L +E + Sbjct: 260 WFGH-----VDWREDIDVGINRSADDLKYWKKRDPILRLKKSLLKENYFGENHLINLEKD 314 Query: 336 VRKIINNSVEFAQSDKEPDPAE 357 ++K I+N+ A + P+ E Sbjct: 315 IQKDIDNAWVDALGESSPEWNE 336 >gi|294011853|ref|YP_003545313.1| pyruvate dehydrogenase E1 component alpha subunit [Sphingobium japonicum UT26S] gi|37963654|gb|AAR05950.1| ORFB [Sphingobium indicum] gi|292675183|dbj|BAI96701.1| pyruvate dehydrogenase E1 component alpha subunit [Sphingobium japonicum UT26S] Length = 323 Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 118/318 (37%), Positives = 173/318 (54%), Gaps = 8/318 (2%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 ++ L + MLLIRR EE+ G L G + G HL IGQEAV G+ L + D + + + Sbjct: 7 QRSLRLFERMLLIRRMEERLGDLGKAGELPGNVHLYIGQEAVATGVCAHLDDSDWVASTH 66 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R HGH LA G D + AEL G++ GI GKGGSMH+ G G +GIVG V L G Sbjct: 67 RGHGHFLAKGGDPRAMAAELMGKETGICHGKGGSMHVADVSKGILGANGIVGGGVGLAVG 126 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 A + ++ VV FGDGA++QG + E+ NIAALW L ++ V ENN ++ + Sbjct: 127 AALGAQLDGEGRVAVVFFGDGASSQGVISEALNIAALWKLPLLLVCENNGFSQFSPYETV 186 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 +A + +R F +PG VDG D+ AV + +AVA R+ +G +IE TYR+R H Sbjct: 187 NA-GDIWRRAEPFGMPGALVDGNDVHAVWRVVGEAVARARSGEGATLIEARTYRWRTHVE 245 Query: 290 SD----PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 S+ A YRT+EE+ + DPI ++ + L+ E D+ I V + +++ Sbjct: 246 SEESFLAAPYRTQEEVESWK-QRDPISRLEEFLVSED--LEKDVAAIRARVEGVTESAIT 302 Query: 346 FAQSDKEPDPAELYSDIL 363 A +D P + + D+ Sbjct: 303 DALNDPLPPVSRAFEDMF 320 >gi|209517733|ref|ZP_03266569.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. H160] gi|209501788|gb|EEA01808.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. H160] Length = 332 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 165/315 (52%), Gaps = 1/315 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +++ + YR M L+++ +E+A G V + GQE + + ++L D + T Sbjct: 9 DRQTLIEMYRKMSLLKQNDEQARAAILSGRVPMIYYSPRGQEVIPAAVSVNLGPEDYICT 68 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR +LA GV ++ AEL G+ G KGKGG MH+ +G GIVG+ + + Sbjct: 69 IYRGIHDMLAKGVPLKELWAELAGKADGTCKGKGGPMHITHPASGAMVTTGIVGSSMPIA 128 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+A A++ R ++ V FGD A+N G +ES N+AA+W L V++V +NN+Y T Sbjct: 129 NGLALASQIRNDRRVTVAYFGDAASNIGAFHESLNMAAVWKLPVVFVCQNNRYGEHTRYE 188 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +A+A S R + +PG+ VDG D A+ A +A+ RA GP +IE +T+R+ GH Sbjct: 189 KATAAARISDRAAGYQMPGVTVDGNDPLAMYAVAREAIDRARAGHGPTLIEAMTFRFYGH 248 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 D A+ + DP+ + R L+ ASE DL +I+ I +++ A Sbjct: 249 VFGD-ADAYMDKAEKAAAMEADPVPRFRTWLIEQGHASEADLSKIDELYASEIREAIDLA 307 Query: 348 QSDKEPDPAELYSDI 362 + PD +EL D+ Sbjct: 308 IAAPFPDLSELNKDV 322 >gi|68061107|ref|XP_672549.1| pyruvate dehydrogenase E1 component, alpha subunit, [Plasmodium berghei strain ANKA] gi|56489705|emb|CAI03678.1| pyruvate dehydrogenase E1 component, alpha subunit, putative [Plasmodium berghei] Length = 343 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 150/289 (51%), Gaps = 50/289 (17%) Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 + Y M L R FE +LY + GF HL GQEA+ G+ +L D +++ YR+H Sbjct: 51 TLYEDMNLGRLFENLVAKLYYNKKISGFVHLYNGQEAISTGIIKNLRNSDFVVSTYRDHV 110 Query: 114 HILACGVDASKIMAELTGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 H ++ V +I+ EL G G + GKGGSMH++S KN F GG G +G Q+ + G+A+ Sbjct: 111 HAISKNVPIKEILNELYGNYYGSTNHGKGGSMHIYSKKNNFIGGFGFIGEQIPISVGLAY 170 Query: 173 ANKYRR---------------------------------------------SDKICVVCF 187 + Y++ +D VVCF Sbjct: 171 SILYKKEFIQDISNQEYQTPLEIKNTLINTINNIKENSIKNNDNQIEQKDENDLDVVVCF 230 Query: 188 -GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA--QTNFSKRGVSFNI 244 GDG +N GQ YES N+A+ +NL +++VIENN +A+G SR+S TN +G SFNI Sbjct: 231 LGDGTSNIGQFYESLNLASTYNLPIVFVIENNNWAIGMEGSRSSLGDLTNNYNKGQSFNI 290 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHK-GPIIIEMLTYRYRGHSMSDP 292 +VDG D+ ++ K + R K GPI+IE +TYR RGHS++DP Sbjct: 291 TTYKVDGNDVLSIYKLAKKKINEIRKKKSGPILIEAITYRTRGHSLADP 339 >gi|328542655|ref|YP_004302764.1| Pyruvate dehydrogenase (acetyl-transferring) [polymorphum gilvum SL003B-26A1] gi|326412400|gb|ADZ69463.1| Pyruvate dehydrogenase (Acetyl-transferring) [Polymorphum gilvum SL003B-26A1] Length = 341 Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 107/319 (33%), Positives = 167/319 (52%), Gaps = 3/319 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + +++ L +R L IR E++A L+ +V G HL +GQEA+ G ++ D+ Sbjct: 15 DDIGEDKRLELWRKQLEIRHCEQRAYDLFLQNLVKGTSHLSLGQEAIAAGFAAAMRPDDK 74 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 YR H H LA GV +++ EL R G+ +GKGGSMH+ S +G G + I+GA + Sbjct: 75 SFCTYRGHAHTLARGVPMEQMLGELMQRDCGLMRGKGGSMHLTSIDHGVMGSYAIIGAHL 134 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + G A+ +Y D + VV FGDG N G +E+ N A ++ L V++V ENN Y T Sbjct: 135 PIAVGSAWRAQYLGHDDVTVVFFGDGTTNIGAFHEALNYAVVFKLPVVFVCENNLYMEYT 194 Query: 225 SVSRASA-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + +A + + R ++ + + +DG D V T A A RA +GP +IE TYR Sbjct: 195 PIGAITAVEHPAADRAGAYGLDKIIIDGNDADEVYRTAQTAFAKARAGEGPSLIECKTYR 254 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 + GHS +DP YR + E+ E HDPI+ R RL A + + +IE V+ + + Sbjct: 255 HSGHSRADPGAYRPKGEL-ERWKEHDPIKVYRARLAEFGIA-DAVIDDIEQAVKAEVERA 312 Query: 344 VEFAQSDKEPDPAELYSDI 362 ++ P L +D+ Sbjct: 313 TAVCKAAPLPPEDILTTDV 331 >gi|239817988|ref|YP_002946898.1| pyruvate dehydrogenase (acetyl-transferring) [Variovorax paradoxus S110] gi|239804565|gb|ACS21632.1| Pyruvate dehydrogenase (acetyl-transferring) [Variovorax paradoxus S110] Length = 337 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 111/320 (34%), Positives = 162/320 (50%), Gaps = 15/320 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGM------------VGGFCHLCIGQEAVIVGMKMSLTEGD 103 YR M+ IR FE A G+ V G HL GQEAV G+ L D Sbjct: 11 YRAMVRIRAFENAAEAASQGGVSAYGQQAAGAAKVRGPLHLSTGQEAVPAGVCAHLRTSD 70 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH LA G D +++M EL G+ G + GKGGSMH+ G G +G+V A Sbjct: 71 YLTSTHRGHGHTLAKGADLARMMCELFGKATGFNGGKGGSMHIADFSVGMLGANGVVAAG 130 Query: 164 VSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + + G A A K R+++ I V FGDGA N+G E+ N A ++ L V++V E+N+++ Sbjct: 131 LPIAVGAAHAQKLLRKNNDITVCFFGDGAINRGPFLEALNWARVYGLPVLFVCEDNRWSA 190 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T+ +A S R S +I QVDG D+ AV T + VA R GP ++ LTY Sbjct: 191 TTASGPMTAGDGASARAASMDIAATQVDGNDVFAVHETAARLVAEVRGGGGPRLLHALTY 250 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R +GH D A YR E+ DPI + R +LL + L IE R ++ Sbjct: 251 RVKGHVSVDLAAYRDPAELAAALET-DPIARARGQLL-DMGVDAATLDAIENAARDEVDT 308 Query: 343 SVEFAQSDKEPDPAELYSDI 362 ++ A + P+ + ++D+ Sbjct: 309 ALAVADAAPWPEASAAFTDV 328 >gi|254696106|ref|ZP_05157934.1| hypothetical protein Babob3T_16085 [Brucella abortus bv. 3 str. Tulya] gi|261216540|ref|ZP_05930821.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella abortus bv. 3 str. Tulya] gi|260918147|gb|EEX85008.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella abortus bv. 3 str. Tulya] Length = 725 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 122/356 (34%), Positives = 165/356 (46%), Gaps = 36/356 (10%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY 73 K+ L PS R T+ D + E ++ L Y M LIRRFEEK Sbjct: 4 KIDLKPSAPWYRLNTTDEDW------QNAEAADL-----LKWYSQMKLIRRFEEKILDFK 52 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS---------- 123 G+V G H IGQEA VG L DQ+ +R H +L ++A Sbjct: 53 KAGLVHGPAHASIGQEAAAVGAMSVLKTDDQINGTHRAHHQVLTKLINAQTPSDFDILQS 112 Query: 124 -----------KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 ++MAE+ G G G+GGSMHM +G G IVG + G A Sbjct: 113 DFTDGMHDAVYRLMAEIMGLNTGYCGGRGGSMHMRDAASGIAGTSAIVGGNIPHAAGYAL 172 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+K I V FGDGA+ QG YE+ NIAAL+ L VI+ +ENN YA+ T + A+ + Sbjct: 173 ADKILNRKGISVAFFGDGASLQGATYEAMNIAALYRLPVIFYVENNLYAVSTHIQDATRE 232 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T + RG G++ DGMDI +V M +A GP++IE YRY S S Sbjct: 233 TRIASRGPMLGFTGIECDGMDILSVHQAMREACRIIEEEGGPVVIEAQCYRYLHQSGSKS 292 Query: 293 AN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + YRTREE E +S DPI +RL A + + +I+ V + + E Sbjct: 293 GSDFGYRTREEEEEWKSR-DPIALAERRLKELGIAGDAEFLKIDERVTAAVQAAGE 347 >gi|161621133|ref|YP_001595019.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella canis ATCC 23365] gi|254703396|ref|ZP_05165224.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella suis bv. 3 str. 686] gi|260567676|ref|ZP_05838145.1| dehydrogenase complex protein [Brucella suis bv. 4 str. 40] gi|261754023|ref|ZP_05997732.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella suis bv. 3 str. 686] gi|161337944|gb|ABX64248.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella canis ATCC 23365] gi|260154341|gb|EEW89422.1| dehydrogenase complex protein [Brucella suis bv. 4 str. 40] gi|261743776|gb|EEY31702.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella suis bv. 3 str. 686] Length = 725 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 122/356 (34%), Positives = 165/356 (46%), Gaps = 36/356 (10%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY 73 K+ L PS R T+ D + E ++ L Y M LIRRFEEK Sbjct: 4 KIDLKPSAPWYRLNTTDEDW------QNAEAADL-----LKWYSQMKLIRRFEEKILDFE 52 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS---------- 123 G+V G H IGQEA VG L DQ+ +R H +L ++A Sbjct: 53 KAGLVHGPAHASIGQEAAAVGAMSVLKTDDQINGTHRAHHQVLTKLINAQTPSDFDILQS 112 Query: 124 -----------KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 ++MAE+ G G G+GGSMHM +G G IVG + G A Sbjct: 113 DFTDGMHDAVYRLMAEIMGLNTGYCGGRGGSMHMRDAASGIAGTSAIVGGNIPHAAGYAL 172 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+K I V FGDGA+ QG YE+ NIAAL+ L VI+ +ENN YA+ T + A+ + Sbjct: 173 ADKILNRKGISVAFFGDGASLQGATYEAMNIAALYRLPVIFYVENNLYAVSTHIQDATRE 232 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T + RG G++ DGMDI +V M +A GP++IE YRY S S Sbjct: 233 TRIASRGPMLGFTGIECDGMDILSVHQAMREACRIIEEEGGPVVIEAQCYRYLHQSGSKS 292 Query: 293 AN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + YRTREE E +S DPI +RL A + + +I+ V + + E Sbjct: 293 GSDFGYRTREEEEEWKSR-DPIALAERRLKELGIAGDAEFLKIDERVTAAVQAAGE 347 >gi|163845196|ref|YP_001622851.1| hypothetical protein BSUIS_B1081 [Brucella suis ATCC 23445] gi|254700275|ref|ZP_05162103.1| hypothetical protein Bsuib55_05360 [Brucella suis bv. 5 str. 513] gi|254705461|ref|ZP_05167289.1| hypothetical protein BpinM_00140 [Brucella pinnipedialis M163/99/10] gi|254712834|ref|ZP_05174645.1| hypothetical protein BcetM6_05617 [Brucella ceti M644/93/1] gi|254715903|ref|ZP_05177714.1| hypothetical protein BcetM_05622 [Brucella ceti M13/05/1] gi|256015847|ref|YP_003105856.1| 2-oxoisovalerate dehydrogenase alpha and beta subunit [Brucella microti CCM 4915] gi|256058760|ref|ZP_05448977.1| hypothetical protein Bneo5_00155 [Brucella neotomae 5K33] gi|256157269|ref|ZP_05455187.1| hypothetical protein BcetM4_00160 [Brucella ceti M490/95/1] gi|256253754|ref|ZP_05459290.1| hypothetical protein BcetB_05572 [Brucella ceti B1/94] gi|261217665|ref|ZP_05931946.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella ceti M13/05/1] gi|261220888|ref|ZP_05935169.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella ceti B1/94] gi|261312868|ref|ZP_05952065.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella pinnipedialis M163/99/10] gi|261320542|ref|ZP_05959739.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella ceti M644/93/1] gi|261322699|ref|ZP_05961896.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella neotomae 5K33] gi|261750768|ref|ZP_05994477.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella suis bv. 5 str. 513] gi|265995756|ref|ZP_06108313.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella ceti M490/95/1] gi|163675919|gb|ABY40029.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|255998507|gb|ACU50194.1| 2-oxoisovalerate dehydrogenase alpha and beta subunit [Brucella microti CCM 4915] gi|260919472|gb|EEX86125.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella ceti B1/94] gi|260922754|gb|EEX89322.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella ceti M13/05/1] gi|261293232|gb|EEX96728.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella ceti M644/93/1] gi|261298679|gb|EEY02176.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella neotomae 5K33] gi|261301894|gb|EEY05391.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella pinnipedialis M163/99/10] gi|261740521|gb|EEY28447.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella suis bv. 5 str. 513] gi|262550053|gb|EEZ06214.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella ceti M490/95/1] Length = 725 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 122/356 (34%), Positives = 165/356 (46%), Gaps = 36/356 (10%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY 73 K+ L PS R T+ D + E ++ L Y M LIRRFEEK Sbjct: 4 KIDLKPSAPWYRLNTTDEDW------QNAEAADL-----LKWYSQMKLIRRFEEKILDFE 52 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS---------- 123 G+V G H IGQEA VG L DQ+ +R H +L ++A Sbjct: 53 KAGLVHGPAHASIGQEAAAVGAMSVLKTDDQINGTHRAHHQVLTKLINAQTPSDFDILQS 112 Query: 124 -----------KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 ++MAE+ G G G+GGSMHM +G G IVG + G A Sbjct: 113 DFTDGMHDAVYRLMAEIMGLNTGYCGGRGGSMHMRDAASGIAGTSAIVGGNIPHAAGYAL 172 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+K I V FGDGA+ QG YE+ NIAAL+ L VI+ +ENN YA+ T + A+ + Sbjct: 173 ADKILNRKGISVAFFGDGASLQGATYEAMNIAALYRLPVIFYVENNLYAVSTHIQDATRE 232 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T + RG G++ DGMDI +V M +A GP++IE YRY S S Sbjct: 233 TRIASRGPMLGFTGIECDGMDILSVHQAMREACRIIEEEGGPVVIEAQCYRYLHQSGSKS 292 Query: 293 AN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + YRTREE E +S DPI +RL A + + +I+ V + + E Sbjct: 293 GSDFGYRTREEEEEWKSR-DPIALAERRLKELGIAGDAEFLKIDERVTAAVQAAGE 347 >gi|225629549|ref|ZP_03787582.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|260167849|ref|ZP_05754660.1| 2-oxoisovalerate dehydrogenase alpha and beta subunit [Brucella sp. F5/99] gi|261757285|ref|ZP_06000994.1| dehydrogenase complex [Brucella sp. F5/99] gi|225616045|gb|EEH13094.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|261737269|gb|EEY25265.1| dehydrogenase complex [Brucella sp. F5/99] Length = 725 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 122/356 (34%), Positives = 165/356 (46%), Gaps = 36/356 (10%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY 73 K+ L PS R T+ D + E ++ L Y M LIRRFEEK Sbjct: 4 KIDLKPSAPWYRLNTTDEDW------QNAEAADL-----LKWYSQMKLIRRFEEKILDFE 52 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS---------- 123 G+V G H IGQEA VG L DQ+ +R H +L ++A Sbjct: 53 KAGLVHGPAHASIGQEAAAVGAMSVLKTDDQINGTHRAHHQVLTKLINAQTPSDFDILQS 112 Query: 124 -----------KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 ++MAE+ G G G+GGSMHM +G G IVG + G A Sbjct: 113 DFTDGMHDAVYRLMAEIMGLNTGYCGGRGGSMHMRDAASGIAGTSAIVGGNIPHAAGYAL 172 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+K I V FGDGA+ QG YE+ NIAAL+ L VI+ +ENN YA+ T + A+ + Sbjct: 173 ADKILNRKGISVAFFGDGASLQGATYEAMNIAALYRLPVIFYVENNLYAVSTHIQDATRE 232 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T + RG G++ DGMDI +V M +A GP++IE YRY S S Sbjct: 233 TRIASRGPMLGFTGIECDGMDILSVHQAMREACRIIEEEGGPVVIEAQCYRYLHQSGSKS 292 Query: 293 AN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + YRTREE E +S DPI +RL A + + +I+ V + + E Sbjct: 293 GSDFGYRTREEEEEWKSR-DPIALAERRLKELGIAGDAEFLKIDERVTAAVQAAGE 347 >gi|311104606|ref|YP_003977459.1| transketolase, C-terminal domain-containing protein 1 [Achromobacter xylosoxidans A8] gi|310759295|gb|ADP14744.1| transketolase, C-terminal domain protein 1 [Achromobacter xylosoxidans A8] Length = 742 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 112/340 (32%), Positives = 165/340 (48%), Gaps = 37/340 (10%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 ++LIRRFEEK +L G++ G H IGQ+ VG+ L D++ +R H LA Sbjct: 51 LILIRRFEEKLLKLSVAGILHGPAHSSIGQDGAAVGVMSMLESADKINGTHRMHHQFLAK 110 Query: 119 GVDAS---------------------KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 ++ + + AE+ G G G+GGSMH+ + G YG + Sbjct: 111 ALNHATPADYSPLASDTLDAHRDVVYRTYAEILGLTPGYCGGRGGSMHLRYPEAGIYGSN 170 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 IVG S G AFA+K R D + V FGDGA G YE+ N+AAL+N I+ +EN Sbjct: 171 AIVGGNPSHAVGYAFADKLRGRDHVSVAFFGDGAMQSGAAYEAMNLAALYNTPTIFFVEN 230 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N YA+ T VS + +T S RG+S +P ++ DGMD+ A + M +A A R +GP+++ Sbjct: 231 NLYAVSTHVSEQTRETRLSARGLSLGVPAIEFDGMDVVAARLAMQEARAIIRRDRGPVLL 290 Query: 278 EMLTYRY---RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 E TYRY G YR ++E E DPI +L + + +E Sbjct: 291 EAQTYRYLHQSGALKGSAFRYRDKDE-EEAWGARDPISTFPAQLKSLGLIDDPGMARLER 349 Query: 335 NVRKIINNSV---------EFAQSDKE---PDPAELYSDI 362 ++I+ ++ E AQ + PDPA + S I Sbjct: 350 RADELIDGALDRLLENYGDEAAQRIRPELWPDPASVDSGI 389 >gi|255084607|ref|XP_002508878.1| pyruvate dehydrogenase [Micromonas sp. RCC299] gi|226524155|gb|ACO70136.1| pyruvate dehydrogenase [Micromonas sp. RCC299] Length = 775 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 108/328 (32%), Positives = 169/328 (51%), Gaps = 14/328 (4%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E + E+ AY +M L R FE + Q Y G + GF HL GQE++ + ++ + Sbjct: 72 EAGALSDEEISEAYTMMQLCRDFENECNQAYMAGKIRGFMHLDNGQESIPALLGNAIRKT 131 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YR+H H LACGVDA +MAEL GR GG +G GGSMH++ + F GG +V Sbjct: 132 DLKHSYYRDHCHALACGVDAGAVMAELFGRDGGTCRGTGGSMHIYDMETNFQGGWALVAE 191 Query: 163 QVSLGTGIAFA---NKY----RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 Q+ G A + +K+ D+I VV G+G A G++ E N AA NL +++V+ Sbjct: 192 QLPYAVGAARSIALDKHLGTGEAEDRIAVVFVGEGGAQNGRMAECLNAAAKENLPILFVV 251 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +N A+ T + +G + IPG+ DG +++ A+ + R KGP Sbjct: 252 IDNGRAINTFTKDVATNQEVFNQGKHYGIPGVLADGQNVQDTMRIGRAAIQHVRT-KGPA 310 Query: 276 IIEMLTYRYRGHSMSDPANYRTR-EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 I+++ T+R+ GHS +DP + R R +E R+ DPI K + A+ DL Sbjct: 311 ILQVHTFRFNGHSPADPEHERNRKDEKRWARAACDPI----KIFEESADAARVDLAACTA 366 Query: 335 NVRKIINNSVEFAQSDKEPDPAELYSDI 362 R+ + ++EFA + P P +L + + Sbjct: 367 KAREEVRKALEFANASPPP-PKDLAAQL 393 >gi|254731725|ref|ZP_05190303.1| Dehydrogenase, E1 component [Brucella abortus bv. 4 str. 292] gi|260759485|ref|ZP_05871833.1| dehydrogenase E1 component [Brucella abortus bv. 4 str. 292] gi|260669803|gb|EEX56743.1| dehydrogenase E1 component [Brucella abortus bv. 4 str. 292] Length = 729 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 155/297 (52%), Gaps = 24/297 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH------ 112 M LIR FE K +L G G+V G H IGQE VG +S+ DQ+ ++R H Sbjct: 38 MHLIRAFEAKVLELAGQGLVHGPAHSAIGQEGGAVGSAVSMRPSDQINGSHRAHHQFLAK 97 Query: 113 --GHILACGVD------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 G++ G+D A + +AE+ G G +G+GGSMH+ ++G G + Sbjct: 98 ALGYVAQKGIDPKAAFDQDIRTLAQRTLAEILGLSQGFCRGRGGSMHLRWAESGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V + G A+A++ + FGDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPMAAGAAWAHRRAGKGDVVYTYFGDGATNIGSVLETMNLAAAWKLPICFFIENN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V +A+ S RG++F IP +VDGMD AV ++A A RA GP IIE Sbjct: 218 RYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIAVWLASEEANAIMRAGNGPTIIE 277 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 YRY + P + YR+++E E R P++ + K LL + E +K + Sbjct: 278 ADVYRYFHQNGPLPGSAFGYRSKDEEAEWRGRA-PLDALAKTLLERQALGEDAIKAL 333 >gi|148553762|ref|YP_001261344.1| pyruvate dehydrogenase [Sphingomonas wittichii RW1] gi|148498952|gb|ABQ67206.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphingomonas wittichii RW1] Length = 327 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 98/278 (35%), Positives = 155/278 (55%), Gaps = 1/278 (0%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 GQE + + +SLT+ D + T YR +A G AE+ GR G KGKGG MH+ Sbjct: 47 GQEIIPAAISVSLTDDDYVNTIYRGGHDQIAKGFPLPDYWAEIAGRVTGACKGKGGPMHL 106 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 G GIVG+ + G+A+A K ++ + FGDGAAN G V+E+ N+AAL Sbjct: 107 TYPAKGIMVTTGIVGSTAPIANGLAWAAKLEGKGRVTIANFGDGAANIGAVHEAMNMAAL 166 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 W L VI+V +NN YA TS++R++ +++KR + + G++VDG D + A+ Sbjct: 167 WQLPVIFVCQNNAYAEHTSMARSTRVDSYAKRAAGYAMEGIRVDGNDPDEMYGAARWAID 226 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASE 326 RA +GP IE T+R+ GH + + Y + E+ DP+ +R+RL+ A+ Sbjct: 227 RARAGEGPTFIEATTFRFNGHLIGEAGGYMDK-ELYAASQTRDPMPILRRRLVDQGIAAA 285 Query: 327 GDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 G+L ++ ++R I+ +V+ A + PDP+EL D+L+ Sbjct: 286 GELDALDASIRAEIDAAVQAAYAADYPDPSELKVDVLV 323 >gi|322372225|ref|ZP_08046766.1| Pyruvate dehydrogenase (acetyl-transferring) [Haladaptatus paucihalophilus DX253] gi|320548234|gb|EFW89907.1| Pyruvate dehydrogenase (acetyl-transferring) [Haladaptatus paucihalophilus DX253] Length = 331 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 103/317 (32%), Positives = 161/317 (50%), Gaps = 15/317 (4%) Query: 59 MLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 M+ R +EE+ + Y G + G HL G EA G+ L + D + Sbjct: 5 MVTARHYEERLQEEYLEGKQPAFDISAGPIPGELHLAAGHEASGAGVCQHLRDDDTVTGP 64 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R H +A GVD ++ AE+ GR+ G+ KGKGG MH+F F GI+ Sbjct: 65 HRPHHVAIAKGVDLKRMTAEIFGRETGLCKGKGGHMHLFDPDVNFSAS-GIIAEGCPPAV 123 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G A A+K R D + V G+GA +QG ES N+A++ +L VI+V+E+N +A+ R Sbjct: 124 GAALASKKRNEDSVAVAFLGEGAIDQGGFLESLNLASVHDLPVIFVVEDNDWAISMPKGR 183 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + N ++R F++PG +VD D AV +AV R GP ++E+ +R GH Sbjct: 184 VTDVENGAQRADGFDMPGHRVDHDDATAVYEAAGEAVGRARDGNGPTLLEVQVHRRMGHF 243 Query: 289 MSDPANYRTREEINEMRSNH-DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 M D YR + + R+ H D I+++ L A EG ++EI ++ + +++E+A Sbjct: 244 MGDAEAYRP--DTDTERAQHLDSIDRLEAD-LRATGADEGTIEEIRSRAKERVEDAIEWA 300 Query: 348 QSDKEPDPAELYSDILI 364 + EPDP E Y D+ Sbjct: 301 KEQPEPDPEEAYEDVFT 317 >gi|327481579|gb|AEA84889.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Pseudomonas stutzeri DSM 4166] Length = 329 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 112/333 (33%), Positives = 166/333 (49%), Gaps = 16/333 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIV 93 +++ N Q L Y ML R EE ++Y G + G HL GQE V Sbjct: 1 MTQPNNSQRLWMYEQMLTSRYMEESIERIYMEGKTPVFNMAKGPIPGEMHLSNGQEPCAV 60 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G+ L GD + +R H +A GVD +++MAE+ G+ G+S G+GG MH+F + F Sbjct: 61 GVCAHLEAGDIVTATHRPHHIAVAKGVDLNEMMAEIFGKATGLSGGRGGHMHLFDGRVNF 120 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 GI+ + G A + + + + V G+GAANQG +E+ N+AALW L V++ Sbjct: 121 -SCSGIIAEGMGPAVGAALSRQMQGKPGVAVSFIGEGAANQGAFHETLNLAALWKLPVVF 179 Query: 214 VIENNQYAMGTSVSRASAQ--TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 VIE+N A G SV++ASA R ++ +PG+ V+ D V +A+ R Sbjct: 180 VIEDN--AWGISVAKASATCIKQHHVRAAAYGMPGVFVENNDPDGVFRAAGEAIERARTG 237 Query: 272 KGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 GP +IE+ TYR GH M D YR E + + DPI R+RL+ SE + Sbjct: 238 GGPTLIEIETYRLAGHFMGDGETYRPEGEKDGLMKK-DPIPGYRQRLIDEGVMSEAQAHD 296 Query: 332 IEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 IE R I+ +V+FA+ P P E + + Sbjct: 297 IEARARGRIDEAVQFARESPYPRPEEALEHVFV 329 >gi|15618224|ref|NP_224509.1| pyruvate dehydrogenase Alpha [Chlamydophila pneumoniae CWL029] gi|15835839|ref|NP_300363.1| pyruvate dehydrogenase alpha [Chlamydophila pneumoniae J138] gi|16752735|ref|NP_445002.1| pyruvate dehydrogenase, E1 component, alpha subunit [Chlamydophila pneumoniae AR39] gi|33241648|ref|NP_876589.1| pyruvate dehydrogenase complex E1 alpha subunit [Chlamydophila pneumoniae TW-183] gi|4376580|gb|AAD18453.1| Pyruvate Dehydrogenase Alpha [Chlamydophila pneumoniae CWL029] gi|7189376|gb|AAF38292.1| pyruvate dehydrogenase, E1 component, alpha subunit [Chlamydophila pneumoniae AR39] gi|8978678|dbj|BAA98514.1| pyruvate dehydrogenase alpha [Chlamydophila pneumoniae J138] gi|33236157|gb|AAP98246.1| pyruvate dehydrogenase complex E1 alpha subunit [Chlamydophila pneumoniae TW-183] Length = 342 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 103/302 (34%), Positives = 162/302 (53%), Gaps = 5/302 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+LIR FE + + Y G+VGGF H GQEAV + + ++YR H + Sbjct: 38 MVLIREFEARGEEAYLEGLVGGFYHSYAGQEAVATAAIANTGLDPWVFSSYRCHALAILL 97 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 + +I AEL G++ G + G+GGSMHM F GG GIVG Q+ L G AF KY+ Sbjct: 98 NIPLQEIAAELLGKETGCALGRGGSMHMCGPN--FPGGFGIVGGQIPLAAGAAFTIKYQE 155 Query: 179 SDKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 +CF GDGA QG +E+ N +L L ++ +IENN ++MGTS++RA A+ ++ Sbjct: 156 QKNRVSLCFIGDGAVAQGVFHETLNFVSLHQLPLMLIIENNGWSMGTSLNRAVAKQPIAE 215 Query: 238 -RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 +G S++I + V+G D+ +A Y + P+++E L R+RGHS+SDP YR Sbjct: 216 SQGSSYDIRAVTVNGFDLFNSLLGFREAYRYMVDTESPVLVECLCSRFRGHSISDPNLYR 275 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 ++EE+ + DPI + L+ + +E + + I + + + A+ +P Sbjct: 276 SKEEMQCL-FKKDPIVLAKDWLIRLEVLTEEEFQNIRQECKTAVLEAFSNAKLSSDPSVT 334 Query: 357 EL 358 L Sbjct: 335 TL 336 >gi|261216671|ref|ZP_05930952.1| dehydrogenase E1 component [Brucella ceti M13/05/1] gi|261319540|ref|ZP_05958737.1| dehydrogenase E1 component [Brucella ceti M644/93/1] gi|260921760|gb|EEX88328.1| dehydrogenase E1 component [Brucella ceti M13/05/1] gi|261292230|gb|EEX95726.1| dehydrogenase E1 component [Brucella ceti M644/93/1] Length = 515 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 111/297 (37%), Positives = 158/297 (53%), Gaps = 32/297 (10%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH------ 112 M LIR FEEK +L G G+V G H IGQE VG +S+ DQ+ ++R H Sbjct: 38 MHLIRAFEEKVLELAGQGLVHGPAHSAIGQEGGAVGSAISMRPSDQINGSHRAHHQFLAK 97 Query: 113 --GHILACGVD------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 G++ G+D A + +AE+ G G +G+GGSMH+ ++G G + Sbjct: 98 ALGYVAQKGIDPKAAFDQDIRTLAQRTLAEILGLSQGFCRGRGGSMHLRWAESGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V + G A+A +RR+ K GDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPMAAGAAWA--HRRAGK------GDGATNIGSVLETMNLAAAWKLPICFFIENN 209 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V +A+ S RG++F IP +VDGMD AV ++A A RA GP IIE Sbjct: 210 RYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIAVWLASEEANAIMRAGNGPTIIE 269 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 YRY + P + YR+++E E R DP++ + K LL + E +K + Sbjct: 270 ADVYRYFHQNGPLPGSAFGYRSKDEEAEWR-GRDPLDALAKTLLERQALGEDAIKAL 325 >gi|319780004|ref|YP_004139480.1| pyruvate dehydrogenase (acetyl-transferring) [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165892|gb|ADV09430.1| Pyruvate dehydrogenase (acetyl-transferring) [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 724 Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 108/314 (34%), Positives = 156/314 (49%), Gaps = 25/314 (7%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ MLLIRRFEEK L G+V G H IGQEA VG L GD++ +R H + Sbjct: 35 YQQMLLIRRFEEKVLDLANAGLVHGPAHASIGQEATAVGAMSVLGTGDRINGTHRAHHQV 94 Query: 116 LACGVDASK---------------------IMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 LA V+A +MAE+ G + G G+GGSMHM +G Sbjct: 95 LAKLVNAQTPGGFDPLHDAFNPDMQGSVRGLMAEIMGLKSGYCGGRGGSMHMRDDASGIP 154 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G I+G + G A A+K + I V FGDG G YE+ NIAAL+ L VI+ Sbjct: 155 GTSAIIGGNLPHAAGYALADKLLGTGNISVAFFGDGTMMAGPAYEAMNIAALYRLPVIFF 214 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ENN YA+ T ++ + +T + RG G++ DGMD+ AV M +A GP Sbjct: 215 AENNLYAVSTHINEQTRETRLASRGPMLGFRGIECDGMDVVAVHHAMREARRAIEEDGGP 274 Query: 275 IIIEMLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 +++E L YR+ S + P + YRTR E + ++ DP+ + RL + DL Sbjct: 275 VLVEALCYRFLHQSGARPGSEFGYRTRAEEDAWKAR-DPLVTMAARLKSMGILNASDLGT 333 Query: 332 IEMNVRKIINNSVE 345 ++ V +++N + + Sbjct: 334 LDQRVMEVVNTAAD 347 >gi|317405148|gb|EFV85490.1| acetoin dehydrogenase [Achromobacter xylosoxidans C54] Length = 727 Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 104/304 (34%), Positives = 163/304 (53%), Gaps = 24/304 (7%) Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH--------G 113 IR FEE L G+V G H +GQE VG ++L GDQ+ ++R H Sbjct: 41 IRAFEEAVLDLAAEGLVHGPAHSSVGQEGGAVGSVLALGAGDQINGSHRGHHQFLAKALQ 100 Query: 114 HILACGVDAS------------KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 H+ G+D K +AE+ G G +G+GGSMH+ + G G + IVG Sbjct: 101 HVAPLGLDPRNPLTPAIDEVLHKTLAEIMGLAQGYCRGRGGSMHLRWLEAGALGTNAIVG 160 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 V L G A+A+ + +D++ V FGDGA N G V E+ N+ A W + + IENN+YA Sbjct: 161 GGVPLAAGAAWAHHHAGTDRVAVTYFGDGAVNIGSVLETMNLTAAWKTPLCFFIENNRYA 220 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T+V ++A+ S RG +FNIP QVDGMD AV M +AVA+ RA GP IIE+ Sbjct: 221 VSTTVEESTAEPRLSARGQAFNIPAWQVDGMDPLAVHLAMSEAVAHMRAGNGPTIIEVDV 280 Query: 282 YRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 YR+ + P + YR++EE + R DP++++ +++ + ++ ++ + + Sbjct: 281 YRFFHQNGPFPGSAFGYRSKEEEAQWR-RRDPLDKIASQMIGRQLITQAEVDALRQRCKD 339 Query: 339 IINN 342 ++ + Sbjct: 340 VMKD 343 >gi|269303179|gb|ACZ33279.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Chlamydophila pneumoniae LPCoLN] Length = 342 Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 103/302 (34%), Positives = 161/302 (53%), Gaps = 5/302 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+LIR FE + + Y G+VGGF H GQEAV + + ++YR H + Sbjct: 38 MVLIREFEARGEEAYLEGLVGGFYHSYAGQEAVATAAIANTGLDPWVFSSYRCHALAILL 97 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 + +I AEL G++ G + G+GGSMHM F GG GIVG Q+ L G AF KY+ Sbjct: 98 NIPLQEIAAELLGKETGCALGRGGSMHMCGPN--FPGGFGIVGGQIPLAAGAAFTIKYQE 155 Query: 179 SDKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 +CF GDGA QG +E+ N +L L ++ +IENN + MGTS++RA A+ ++ Sbjct: 156 QKNRVSLCFIGDGAVAQGVFHETLNFVSLHQLPLMLIIENNGWGMGTSLNRAVAKQPIAE 215 Query: 238 -RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 +G S++I + V+G D+ +A Y + P+++E L R+RGHS+SDP YR Sbjct: 216 SQGSSYDIRAVTVNGFDLFNSLLGFREAYRYMVDTESPVLVECLCSRFRGHSISDPNLYR 275 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 ++EE+ + DPI + L+ + +E + + I + + + A+ +P Sbjct: 276 SKEEMQCLFKK-DPIVLAKDWLIRLEVLTEEEFQNIRQECKTAVLEAFSNAKLSSDPSVT 334 Query: 357 EL 358 L Sbjct: 335 TL 336 >gi|153868721|ref|ZP_01998472.1| Pyruvate dehydrogenase (lipoamide) [Beggiatoa sp. PS] gi|152074692|gb|EDN71523.1| Pyruvate dehydrogenase (lipoamide) [Beggiatoa sp. PS] Length = 331 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 103/319 (32%), Positives = 165/319 (51%), Gaps = 4/319 (1%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 ++ +N E+ L+ YR +LLIRR EE + Y + HLCIGQEAV VG+ L + Sbjct: 7 KLEPYNHEELLTFYRSLLLIRRVEEAIAERYTEQEMRCPTHLCIGQEAVAVGVCKMLQQS 66 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + +++R H H LA G D ++AEL G+ G G+GGSMH+ GF G IVG+ Sbjct: 67 DGIFSSHRAHSHYLAKGGDLKAMIAELYGKSTGCCGGRGGSMHLIDLAAGFIGATPIVGS 126 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + + G A++ R +++ VV FGDG +G ++ES N A+L+ L +I+V ENN Y++ Sbjct: 127 TIPIAVGHAWSAYLRGKNRVTVVFFGDGCFEEGVMHESMNFASLYKLPIIFVCENNGYSV 186 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T + + S + DG D+ V A +A+ R +GP +E+ TY Sbjct: 187 YTRLEARQPERTIRGIAQSHGLETYHGDGNDVLNVTALAREAINRTRRGEGPQFLELDTY 246 Query: 283 RYRGH---SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 R+ H + D YR E+ + P+EQ + LL ++ + +++++E V Sbjct: 247 RWLEHCGPNDDDNLGYRPAGELMSWKKR-CPVEQFKNLLLESQKVTHTEIQQVENEVLHE 305 Query: 340 INNSVEFAQSDKEPDPAEL 358 I + +A P A + Sbjct: 306 IEAAFSYALESPNPTSASM 324 >gi|116619493|ref|YP_821649.1| pyruvate dehydrogenase [Candidatus Solibacter usitatus Ellin6076] gi|116222655|gb|ABJ81364.1| Pyruvate dehydrogenase (acetyl-transferring) [Candidatus Solibacter usitatus Ellin6076] Length = 340 Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 161/305 (52%), Gaps = 2/305 (0%) Query: 59 MLLIRRFEEK-AGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 MLL+R E++ +LY G + G ++ GQEA+ VG + D M ++R+ Sbjct: 33 MLLMREVEDRIERKLYRQGKILGGVYVGRGQEAIPVGSALVAVPEDVMFPSHRDMAVFFI 92 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 GV A +++A+ GR GG+++G+ G+MHM + A V + TG A A +Y+ Sbjct: 93 RGVSARRVLAQYMGRLGGLTRGRDGNMHMGDMSVNVVSIISALAATVPVATGAALAMRYK 152 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + FGDG+ ++G +E N A++ L V+++ NNQYA T + A N + Sbjct: 153 GIPGVAFSYFGDGSTSRGDWHEGVNFASVQKLPVVFICNNNQYAYSTPLHLQMACANVAD 212 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 RG ++N+P VDG D+ AV +AV + R GP ++E T+R GHS D A Y Sbjct: 213 RGPAYNMPAEIVDGNDVLAVYEATQRAVTHARGGLGPYLLECKTFRMTGHSAHDAATYVP 272 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 + E DPI ++ KR+L +W+ + ++ E+ V + ++++V +A+ PD A Sbjct: 273 KGLFEEW-GKLDPIVRLEKRMLEERWSLQEEIDELHAAVIREVDDAVAWAEQSPYPDAAS 331 Query: 358 LYSDI 362 L D+ Sbjct: 332 LLDDV 336 >gi|71909312|ref|YP_286899.1| dehydrogenase, E1 component [Dechloromonas aromatica RCB] gi|71848933|gb|AAZ48429.1| Dehydrogenase, E1 component [Dechloromonas aromatica RCB] Length = 320 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 99/269 (36%), Positives = 144/269 (53%), Gaps = 2/269 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L Y +LLIR +E + G + G C +GQEA VG +L D ++T +R Sbjct: 11 LRLYEQLLLIRAYENAIVRGSTDGRIPGTC-TSVGQEAAAVGAINALEADDLILTNHRSA 69 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GH+LA G D +++AE+ GR+ G KG+ GS+H+ + + G IVG ++SL G+A Sbjct: 70 GHLLARGADPGRMLAEVMGRRDGYCKGRSGSLHISAKELGVVLTTTIVGGELSLAPGVAL 129 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + I FGDGAA +G +ES N+AALWNL V+Y+ ENNQ+ A + Sbjct: 130 AQTMQGRPGIVACFFGDGAACEGSFHESLNLAALWNLPVLYICENNQWQAFVHRREAMSS 189 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + S G + IP VDG D+ AV +A R + P+++E+LTYR RGH D Sbjct: 190 EHVSDWGAGYGIPARTVDGNDVFAVLEATREAATQVRDTRRPVLLEVLTYRTRGHFEPDD 249 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHN 321 Y + E+ + DPI R RL+ + Sbjct: 250 QGYVDKAELAAWLAR-DPIALCRDRLIAD 277 >gi|111222456|ref|YP_713250.1| pyruvate dehydrogenase E1 component subunit alpha [Frankia alni ACN14a] gi|111149988|emb|CAJ61683.1| Pyruvate dehydrogenase E1 component, alpha subunit [Frankia alni ACN14a] Length = 342 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 104/343 (30%), Positives = 176/343 (51%), Gaps = 13/343 (3%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 S+SA + ++VD P L+ +L +R I RF+EK L G +G Sbjct: 2 SISAPPDSAAAVDFSAPPDLD----------VQLGLFRTATRIARFDEKYRSLMTSGAIG 51 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 G + GQE + L D ++T YR +A GV ++ AE G+ G G Sbjct: 52 GMYYSPRGQEFAAASVAAHLRRDDYVVTTYRGLHDQIAKGVPLRELWAEYLGKAAGTCGG 111 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGG MH+ + + G G+VG+ + + G+A + + R +D++ VV FGDGA+N G +E Sbjct: 112 KGGPMHVTAPEYGLMVTTGVVGSGLPIANGLALSAQLRGTDQVTVVNFGDGASNIGAFHE 171 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 S N+A++W L VI+V +NN+YA T + ++ ++R ++++PG+ VDG D + Sbjct: 172 SLNLASIWRLPVIFVCQNNRYAEYTPLREGTSVDRIAQRAAAYSLPGVTVDGNDPIELYN 231 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 A+ R GP ++E +T+R+ GH M D Y EE+ + DP+ + R +L Sbjct: 232 AAGAAIERARTGGGPTLLEAMTFRFCGHIMGDQQVYMPPEELRAAIA-ADPLVRFRAQLA 290 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + E +L +E + ++ EFA++ + P + L +D+ Sbjct: 291 AD--VGEDELAAVERAAADEVADAWEFARTAELPAASALTTDV 331 >gi|148553962|ref|YP_001261544.1| dehydrogenase, E1 component [Sphingomonas wittichii RW1] gi|148499152|gb|ABQ67406.1| dehydrogenase, E1 component [Sphingomonas wittichii RW1] Length = 334 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 107/302 (35%), Positives = 151/302 (50%), Gaps = 13/302 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+ IR E+ G L+ G + GF HL GQE V VG+ SL D + + +R HGH Sbjct: 27 YRRMVTIREAEKSCGALFAAGEIPGFIHLSDGQEGVSVGVMASLRADDTIASTHRGHGHA 86 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G+ EL G+ G KG+GGSMH+ G G +GIVG V++ G A K Sbjct: 87 LAKGLGLDGFFRELMGKADGACKGRGGSMHVADLSVGMLGANGIVGGGVAIALGSGLAQK 146 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R D + + FGDGA +G V+ES NIA L + +++V ENN + + S S Q F Sbjct: 147 LRGGDGLAICFFGDGALAEGIVHESLNIAQLKQIPILFVCENNGW---SEFSPTSTQVTF 203 Query: 236 S--KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + K ++ IP + DG D+ V V R +GP ++E T R RGH D Sbjct: 204 TLEKLAAAYGIPYVGADGSDVETVAELAADVVDRVRRDRGPAVLEFATTRIRGHYEGDAQ 263 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR + DP+ R R L + +++ IE ++R + +VE A+ P Sbjct: 264 RYR-----QDKAPPVDPLLVARAR-LDERGVPAAEVEAIEADIRAEVRRAVEAAR--LSP 315 Query: 354 DP 355 DP Sbjct: 316 DP 317 >gi|91780879|ref|YP_556086.1| putative 2-oxo acid dehydrogenase alpha subunit [Burkholderia xenovorans LB400] gi|91693539|gb|ABE36736.1| Putative 2-oxo acid dehydrogenase alpha subunit [Burkholderia xenovorans LB400] Length = 334 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 100/273 (36%), Positives = 151/273 (55%), Gaps = 2/273 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E ++ + + YR M+L+R E +L+ V GF HL +GQEAV G+ L D + Sbjct: 13 EADRRKLIDIYRTMVLVREVELSLSRLFADSEVPGFIHLSLGQEAVSAGVASVLEVQDTL 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T +R HGH+LA G+D E+ GR GG+ KG+GGSMH+ G G +GIVGA + Sbjct: 73 ATTHRGHGHVLARGIDVGGFFKEIMGRVGGLCKGRGGSMHVADLALGVLGANGIVGAGIP 132 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A A+ R++ + V FGDGA +G ++E+ N+AALW ++ V ENN ++ + Sbjct: 133 IALGSAVAHHVRKTRGVAVAFFGDGAMAEGVLHETMNMAALWKAPLLLVCENNGWSEFSP 192 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R A + G +F I +VDG D AV A A R+ GP ++E +T+R R Sbjct: 193 TERQFAARLEALAG-AFGIAYKRVDGDDAVAVSEASGIAAAAARSGAGPFVLECVTHRVR 251 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 GH DP YR E++ + + DP++++ L Sbjct: 252 GHYEGDPQKYRDPTELDGL-AGKDPLKRMHTHL 283 >gi|112361525|gb|ABI15624.1| acetoin dehydrogenase alpha-subunit [consortium cosmid clone pGZ1] Length = 344 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 107/280 (38%), Positives = 144/280 (51%), Gaps = 13/280 (4%) Query: 51 QELSAYRLMLLIRRFEEKA-----------GQLYGM-GMVGGFCHLCIGQEAVIVGMKMS 98 Q L YR M IR FE+ A GQ G V G HL GQEAV G+ Sbjct: 13 QLLDLYRTMCRIRAFEDAALEASRGGVTAFGQSAGTRAQVRGPLHLSTGQEAVATGVCSQ 72 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L D + + +R HGH +A G D ++M EL GR G GKGGSMH+ G G +G Sbjct: 73 LRADDWLTSTHRGHGHTIAKGADLRRMMHELFGRASGFCGGKGGSMHIADFSVGMLGANG 132 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 +V A + + G A + + + D I V FGDGA N+G E N AA + L +++V E+N Sbjct: 133 VVAAGIPIAVGAAQSMRVQGRDSIAVCFFGDGALNRGPFGEGLNWAAAFRLPMLFVCEDN 192 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 Q++ T + SA + R F +P ++VDGMD+ AV AVA RA +GP ++ Sbjct: 193 QWSATTRTAEMSAGDGAAARARGFGVPALEVDGMDVVAVWRAARDAVASVRAGEGPRLLH 252 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 TYR+ GH DPA YR E+ + DP+ R RL Sbjct: 253 AKTYRFTGHVSVDPAAYRDPGELAAAMED-DPLLVARVRL 291 >gi|148553273|ref|YP_001260855.1| pyruvate dehydrogenase [Sphingomonas wittichii RW1] gi|148498463|gb|ABQ66717.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphingomonas wittichii RW1] Length = 326 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 105/312 (33%), Positives = 168/312 (53%), Gaps = 2/312 (0%) Query: 52 ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 ++ YR M LI+ +E++ ++ G + + GQE + + +SLT+ D + T YR Sbjct: 12 QIEIYRRMALIKANDERSRKVIMTGRLVMPYYSPRGQEVIPSAISVSLTDEDYVCTIYRG 71 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 LA G+ + AE+ GR G KGKGG MH+ G GIVG+ + + G+A Sbjct: 72 SHDQLAKGLPLKDLWAEVAGRTTGTCKGKGGPMHVTYPTKGIMVTTGIVGSTMPIANGLA 131 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + ++ R ++ V FGDGAAN G +ES N+A++W L VI+V +NN++ T+ + S Sbjct: 132 WGSQLRGDGRVTVANFGDGAANIGAFHESLNLASVWKLPVIFVCQNNEWGEHTAYDKTS- 190 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + R ++ IPG +VDG D A+ A +A+ RA +GP +IE +TYR+ GH D Sbjct: 191 NVRVADRAAAYGIPGERVDGNDPFAMYAAAREAIERARAGEGPTLIEAMTYRFHGHVFGD 250 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 Y ++ ++ DP+ + R RL+ + ASE L +E + I+ +VEFA + Sbjct: 251 QDAYMDKDRKARAMAD-DPVPRFRARLIADGVASEEQLVAMEAEIEAQIDEAVEFALASD 309 Query: 352 EPDPAELYSDIL 363 P EL D+ Sbjct: 310 FPGVEELKRDVF 321 >gi|41407586|ref|NP_960422.1| hypothetical protein MAP1488c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395939|gb|AAS03805.1| hypothetical protein MAP_1488c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 330 Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 161/312 (51%), Gaps = 11/312 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI-----GQEAVIVGMKMSLTEGDQMITAYR 110 Y LM+L++ +++ + G G LC+ GQEA+ M ++L DQ++T YR Sbjct: 16 YALMVLMKTADDRLSRGIGTGEF-----LCVYWPSRGQEAIAAAMGVTLRPDDQLVTTYR 70 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 ++ GV +I E+ GR G +GKGG+MH+ + G GIVGA + G+ Sbjct: 71 GLHDLIGKGVGLEEIYGEMMGRTIGAGRGKGGTMHIAKPEVGVMLSTGIVGAGPPVAVGL 130 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A + + D++ VV FGDGA N G +E+ N+AALW+L +++V +NN+YA T + Sbjct: 131 AMAARRKGLDRVTVVSFGDGATNTGSFHEAANMAALWDLPIVFVCQNNRYAEMTPTTDTM 190 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + R + +PG++VDG D AV A +++A+ RA GP +E T+R+RGH Sbjct: 191 KLEHVADRAAGYGMPGVRVDGNDPLAVTAALEEALRRARAGSGPTFLECETFRFRGHYFG 250 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 D Y + + DP+ + R+RL E +L I+ + + ++ Sbjct: 251 DRMPY-IPADQLQAALAADPVPRFRRRLAETGVCGEAELARIDDDAAATVEAALRTVLGA 309 Query: 351 KEPDPAELYSDI 362 P EL D+ Sbjct: 310 DSPAADELDRDV 321 >gi|256110978|ref|ZP_05452046.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella melitensis bv. 3 str. Ether] gi|265992522|ref|ZP_06105079.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella melitensis bv. 3 str. Ether] gi|262763392|gb|EEZ09424.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella melitensis bv. 3 str. Ether] Length = 725 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 120/356 (33%), Positives = 163/356 (45%), Gaps = 36/356 (10%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY 73 K+ L PS R T+ D + E ++ L Y M LIRRFEEK Sbjct: 4 KIDLKPSAPWYRLNTTDEDW------QNAEAADL-----LKWYSQMKLIRRFEEKILDFE 52 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS---------- 123 G+V G H IGQEA VG L DQ+ +R H +L ++A Sbjct: 53 KAGLVHGPAHASIGQEAAAVGAMSVLKTDDQINGTHRAHHQVLTKLINAQTPSDFDILQS 112 Query: 124 -----------KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 ++MAE+ G G G+GGSMHM +G G IVG + G A Sbjct: 113 DFTDGMHDAVYRLMAEIMGLNTGYCGGRGGSMHMRDAASGIAGTSAIVGGNIPHAAGYAL 172 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+K I V FGDG + QG YE+ NIAAL+ L VI+ +ENN YA+ T + A+ + Sbjct: 173 ADKILNRKGISVAFFGDGPSLQGATYEAMNIAALYRLPVIFYVENNLYAVSTHIQDATRE 232 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T + R G++ DGMDI +V M +A GP++IE YRY S S Sbjct: 233 TRIASRCPMLGFTGIECDGMDILSVHQAMREACRIIEEEGGPVVIEAQCYRYLHQSGSKS 292 Query: 293 AN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + YRTREE E +S DPI +RL A + + +I+ V + + E Sbjct: 293 GSDFGYRTREEEEEWKSR-DPIALAERRLKELGIAGDAEFLKIDERVTAAVQAAGE 347 >gi|225686851|ref|YP_002734823.1| 2-oxoisovalerate dehydrogenase subunit beta [Brucella melitensis ATCC 23457] gi|256262031|ref|ZP_05464563.1| dehydrogenase complex [Brucella melitensis bv. 2 str. 63/9] gi|225642956|gb|ACO02869.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella melitensis ATCC 23457] gi|263091709|gb|EEZ16052.1| dehydrogenase complex [Brucella melitensis bv. 2 str. 63/9] gi|326411268|gb|ADZ68332.1| 2-oxoisovalerate dehydrogenase subunit beta [Brucella melitensis M28] gi|326554557|gb|ADZ89196.1| 2-oxoisovalerate dehydrogenase subunit beta [Brucella melitensis M5-90] Length = 725 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 120/356 (33%), Positives = 163/356 (45%), Gaps = 36/356 (10%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY 73 K+ L PS R T+ D + E ++ L Y M LIRRFEEK Sbjct: 4 KIDLKPSAPWYRLNTTDED------WQNAEAADL-----LKWYSQMKLIRRFEEKILDFE 52 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS---------- 123 G+V G H IGQEA VG L DQ+ +R H +L ++A Sbjct: 53 KAGLVHGPAHASIGQEAAAVGAMSVLKTDDQINGTHRAHHQVLTKLINAQTPSDFDILQS 112 Query: 124 -----------KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 ++MAE+ G G G+GGSMHM +G G IVG + G A Sbjct: 113 DFTDGMHDAVYRLMAEIMGLNTGYCGGRGGSMHMRDAASGIAGTSAIVGGNIPHAAGYAL 172 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+K I V FGDG + QG YE+ NIAAL+ L VI+ +ENN YA+ T + A+ + Sbjct: 173 ADKILNRKGISVAFFGDGPSLQGATYEAMNIAALYRLPVIFYVENNLYAVSTHIQDATRE 232 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T + R G++ DGMDI +V M +A GP++IE YRY S S Sbjct: 233 TRIASRCPMLGFTGIECDGMDILSVHQAMREACRIIEEEGGPVVIEAQCYRYLHQSGSKS 292 Query: 293 AN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + YRTREE E +S DPI +RL A + + +I+ V + + E Sbjct: 293 GSDFGYRTREEEEEWKSR-DPIALAERRLKELGIAGDAEFLKIDERVTAAVQAAGE 347 >gi|284164884|ref|YP_003403163.1| pyruvate dehydrogenase (acetyl-transferring) [Haloterrigena turkmenica DSM 5511] gi|284014539|gb|ADB60490.1| Pyruvate dehydrogenase (acetyl-transferring) [Haloterrigena turkmenica DSM 5511] Length = 348 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 98/319 (30%), Positives = 161/319 (50%), Gaps = 13/319 (4%) Query: 56 YRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 Y M+ R +EE+ + Y G + G HL G EA G+ L + D + Sbjct: 11 YEAMVTARHYEERLQEEYLEGKQPAFDISAGPIPGELHLAAGHEASGAGVCQHLRDDDTV 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +R H +A GVD ++ AE+ GR+ G+SKGKGG MH+F F GI+ Sbjct: 71 TAPHRPHHIAVAKGVDLKRMTAEIFGRETGLSKGKGGHMHLFDPDVNF-ACSGIIAEGCP 129 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A K R +D + V G+GA +QG ES N+AA+ +L V++V+E+N +A+ Sbjct: 130 PAVGAGLAAKKRNTDSVAVAFLGEGAIDQGAFLESLNMAAVQDLPVVFVVEDNDWAISMP 189 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R + N ++R F++PG +VD D AV +A+ R GP ++E+ +R Sbjct: 190 KERVTDVENGAQRAGGFDLPGTRVDADDAVAVYEAAREAIGRARDRNGPSLLEVQVHRRM 249 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH M DP YR+ E+ E D I+++ L + +E + + + ++ + ++E Sbjct: 250 GHFMGDPQAYRSDED-EEAAQQRDSIDRLEADLRAHGVDNET-VASLRSSAQERVEEAIE 307 Query: 346 FAQSDKEPDPAELYSDILI 364 +A+ EP+PA+ + D+ Sbjct: 308 WAKEQPEPEPADAHEDVFT 326 >gi|254818853|ref|ZP_05223854.1| hypothetical protein MintA_02954 [Mycobacterium intracellulare ATCC 13950] Length = 335 Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 103/313 (32%), Positives = 156/313 (49%), Gaps = 1/313 (0%) Query: 52 ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 E Y LM+L++ +++ + G G GQEA+ M ++L DQ++T YR Sbjct: 17 ERRLYELMVLMKAADDRLSKGIGTGEFMCVYWPSRGQEAIAAAMGVALRPDDQLVTTYRG 76 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 ++ GV +I E+ GR G +GKGG+MH+ + G GIVGA + G+A Sbjct: 77 LHDLIGKGVPLEEIYGEMMGRTVGAGRGKGGTMHIANPAKGVMLSTGIVGAGPPVAVGLA 136 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A K + D++ VV FGDGA N G +E+ N+AALW+L +++V +NN YA T S Sbjct: 137 MAAKRKGIDRVTVVSFGDGATNTGSFHEAANMAALWDLPLVFVCQNNLYAEMTPTSDTMK 196 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + + R + +PG++VDG D AVKA +D A+ R GP IE +T+R+RGH D Sbjct: 197 LEHVADRAAGYGMPGVRVDGNDPLAVKAALDDALRRARDGGGPTFIECVTFRFRGHYFGD 256 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 Y E E DP+ + R L DL I+ + + ++ Sbjct: 257 RTPY-IPAEQLEAALAADPVPRFRSHLEGTGVCDHDDLVRIDSDAAAAVEAALRTVLGAD 315 Query: 352 EPDPAELYSDILI 364 P EL D+ + Sbjct: 316 SPSIDELDRDVYV 328 >gi|111025405|ref|YP_707825.1| acetoin dehydrogenase alpha subunit [Rhodococcus jostii RHA1] gi|110824384|gb|ABG99667.1| probable acetoin dehydrogenase alpha subunit [Rhodococcus jostii RHA1] Length = 317 Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 106/307 (34%), Positives = 161/307 (52%), Gaps = 2/307 (0%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMITA 108 E L+ YR M IR E + +L + V G HLC GQEA+ VG L D + Sbjct: 3 EPLLAHYRQMYRIRVLENEILRLRKIEEVVGSVHLCNGQEAIYVGAAAGLDLSRDAVFPT 62 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR HG LA G I+AEL GR G + G+GGS + + YG + IVGA + Sbjct: 63 YRGHGWALALGATMHSILAELLGRSTGTNGGRGGSAYFSTPDTAMYGENSIVGAGAPIAA 122 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G A A + S ++ V FGDGA NQG V+E+ N AA+ L +I+++ENN Y+ T + Sbjct: 123 GAALAATFDGSGRVAVAAFGDGALNQGAVHEAMNFAAVQQLPIIFLVENNHYSEMTPIVD 182 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 KR ++ I G ++DG D AV+ + KA + RA KGP+++E +T+R GH Sbjct: 183 MVKNPVLFKRAAAYGITGARIDGNDPIAVRDAVSKAAQHARAGKGPVLLEAMTHRIVGHY 242 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 + D YR EI+++ ++ +P+ + + LL ++ +L + +V + + A Sbjct: 243 IGDAQQYRPAGEIDDIEAD-EPLVRAARNLLQESGVTQTELDALIADVNDEVRAASLAAL 301 Query: 349 SDKEPDP 355 +D DP Sbjct: 302 ADPVADP 308 >gi|292656714|ref|YP_003536611.1| 2-oxoacid dehydrogenase E1 component subunit alpha [Haloferax volcanii DS2] gi|18958200|emb|CAD24096.1| 2-oxo acid dehydrogenase subunit E1 [Haloferax volcanii] gi|291372893|gb|ADE05120.1| 2-oxoacid dehydrogenase E1 component alpha subunit [Haloferax volcanii DS2] Length = 353 Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 99/318 (31%), Positives = 159/318 (50%), Gaps = 13/318 (4%) Query: 56 YRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 Y M+ R +EE+ Y G + G HL G EA G+ M L + D + Sbjct: 11 YEQMVTARHYEERLVDEYLVGKQPAFDISAGPIPGELHLAAGHEASGAGVCMHLRDDDTV 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +R H +A GVD ++ AE+ GR+ G+ +GKGG MH+F F GI+ Sbjct: 71 TAPHRPHHIAIAKGVDLKRMTAEIFGRKTGLCRGKGGHMHLFDPDVNFACA-GIIAQGCP 129 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A A K R +D + V G+GA +QG ES N+AA+ +L V++V+E+N +A+ Sbjct: 130 PAVGAAMAAKKRNTDSVAVAFLGEGAIDQGGFLESLNLAAVHDLPVVFVVEDNDWAISMP 189 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R + N ++R F++PG+++D D AV +AV R GP +IE+ +R Sbjct: 190 KDRVTDVQNGAQRAAGFDLPGVRIDSDDATAVYEAAGEAVMRARDGNGPTLIEVQVHRRM 249 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH M D YR +I+ + D IE++ L + ++ D+ E+ + ++ Sbjct: 250 GHFMGDAEAYRPEADIDRAKQR-DSIERLAAD-LRSHGVTDDDIDEMRERAHGRVEAAIS 307 Query: 346 FAQSDKEPDPAELYSDIL 363 +A+ EP+PAE Y ++ Sbjct: 308 WAKEQPEPEPAEAYENVF 325 >gi|158316487|ref|YP_001508995.1| pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EAN1pec] gi|158111892|gb|ABW14089.1| Pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EAN1pec] Length = 332 Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 96/277 (34%), Positives = 145/277 (52%), Gaps = 1/277 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y LM L++ +++ + G + GQEA+ M + L DQ++T YR + Sbjct: 18 YELMTLMKAADDRLSRGIASGELQCVYWPPRGQEAIAAAMGVCLRSDDQLVTTYRGLHDL 77 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + GV +I E+ GRQ G +GKGG+MH+ +G GIVG+ + G+A A + Sbjct: 78 IGKGVPLVEIYGEMLGRQVGSGRGKGGTMHIARPDSGVMLSTGIVGSGPPVAVGMAMAAR 137 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + D++ V FGDGA N G +E+ N+AALW+L ++ V +NNQY T Sbjct: 138 RKGLDRVTAVSFGDGATNTGSFHEAANMAALWDLPLVLVCQNNQYGEMTPTEHTMKIAQV 197 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + R + +PG++VDG D AV A + +AV R+ GP ++E +T+R+RGH DP Y Sbjct: 198 ADRAGGYGMPGVRVDGNDPLAVLAVLTQAVERARSGGGPTLVECVTFRFRGHYFGDPMAY 257 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 E + DPI + R RLL E +L EI Sbjct: 258 IPAERMAAA-VEADPIPRFRSRLLETGVCDEHELDEI 293 >gi|17988560|ref|NP_541193.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella melitensis bv. 1 str. 16M] gi|256043969|ref|ZP_05446885.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella melitensis bv. 1 str. Rev.1] gi|260565145|ref|ZP_05835630.1| dehydrogenase complex protein [Brucella melitensis bv. 1 str. 16M] gi|265990385|ref|ZP_06102942.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella melitensis bv. 1 str. Rev.1] gi|17984357|gb|AAL53457.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella melitensis bv. 1 str. 16M] gi|260152788|gb|EEW87881.1| dehydrogenase complex protein [Brucella melitensis bv. 1 str. 16M] gi|263001054|gb|EEZ13744.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella melitensis bv. 1 str. Rev.1] Length = 725 Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 119/356 (33%), Positives = 163/356 (45%), Gaps = 36/356 (10%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY 73 K+ L PS R T+ D + E ++ L Y M LIRRFEEK Sbjct: 4 KIDLKPSAPWYRLNTTDEDW------QNAEAADL-----LKWYSQMKLIRRFEEKILDFE 52 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS---------- 123 G+V G H IGQEA VG L DQ+ +R H +L ++A Sbjct: 53 KAGLVHGPAHASIGQEAAAVGAMSVLKTDDQINGTHRTHHQVLTKLINAQTPSDFDILQS 112 Query: 124 -----------KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 ++MAE+ G G G+GGSMHM +G G IVG + G A Sbjct: 113 DFTDGMHDAVYRLMAEIMGLNTGYCGGRGGSMHMRDAASGIAGTSAIVGGNIPHAAGYAL 172 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+K I V FGDG + QG YE+ NIAAL+ L VI+ +ENN YA+ T + A+ + Sbjct: 173 ADKILNRKGISVAFFGDGPSLQGATYEAMNIAALYRLPVIFYVENNLYAVSTHIQDATRE 232 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T + R G++ DGMDI +V M +A GP++IE YRY S S Sbjct: 233 TRIASRCPMLGFTGIECDGMDILSVHQAMREACRIIEEEGGPVVIEAQCYRYLHQSGSKS 292 Query: 293 AN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + YRTREE E +S DPI +RL A + + +++ V + + E Sbjct: 293 GSDFGYRTREEEEEWKSR-DPIALAERRLKELGIAGDAEFLKLDERVTAAVQAAGE 347 >gi|308813007|ref|XP_003083810.1| pyruvate dehydrogenase E1 component beta (ISS) [Ostreococcus tauri] gi|116055692|emb|CAL57777.1| pyruvate dehydrogenase E1 component beta (ISS) [Ostreococcus tauri] Length = 835 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 109/335 (32%), Positives = 173/335 (51%), Gaps = 18/335 (5%) Query: 40 EGFEVSEFNKEQELS-AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 E + +E +++LS AY +M L R FE + Q Y G + GF HL GQE++ + + Sbjct: 124 EELKRAEALSDEDLSKAYYMMQLCRDFENECNQAYMAGKIRGFMHLDNGQESIPALLNDA 183 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 + + D + YR+H H +ACGVD+ +MAEL G+ GG +G GGSMH++ F GG Sbjct: 184 IRKDDLKHSYYRDHCHAIACGVDSGAVMAELFGKDGGTCRGTGGSMHVYDMDTNFQGGWA 243 Query: 159 IVGAQVSLGTGIA-------FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 +V Q+ G A + D+I VV G+G A G++ E N AA NL + Sbjct: 244 LVAEQLPYAVGAARSIVLDKMLGRDDAQDRITVVFVGEGGAQNGRMAECLNAAAKENLPI 303 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 ++++ +N A+ T +A +G + +PG+ VDG +++ V + + R Sbjct: 304 LFLVIDNGRAINTFTKDVAANQEVFNQGKHYGVPGVLVDGQNVQDVLKVGRTVINHVRT- 362 Query: 272 KGPIIIEMLTYRYRGHSMSDPANYRTR-EEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 KGP I+++ T+R+ GHS +DP + R R +E R+ DPI K ++ A+ DLK Sbjct: 363 KGPAILQVHTFRFNGHSPADPEHERNRKDEKRWARAECDPI----KIFENSADAARIDLK 418 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDP---AEL-YSD 361 + + ++ FA + P P AEL Y D Sbjct: 419 KETERAKAETQRALAFADASPPPPPGLAAELEYPD 453 >gi|298242688|ref|ZP_06966495.1| Pyruvate dehydrogenase (acetyl-transferring) [Ktedonobacter racemifer DSM 44963] gi|297555742|gb|EFH89606.1| Pyruvate dehydrogenase (acetyl-transferring) [Ktedonobacter racemifer DSM 44963] Length = 365 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 155/304 (50%), Gaps = 1/304 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L + LM L R EE+ L+ G V G + G EA VG M+L +GD ++ +R+ Sbjct: 12 LQIFYLMRLTRAMEERTRTLFLQGRVVGGVYTAQGHEATTVGAAMTLRDGDCIVPQHRDL 71 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G L G +M + R S G+ G +H+ +G ++G + + G+A Sbjct: 72 GMHLVRGTSPRAVMCQWLARGNSPSLGRDGQLHIGDMHHGIVPMISMLGESLPVACGVAL 131 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 K R+ + I + GDGA N G +E+ N+A++ L ++ VIENN YA T + Sbjct: 132 TMKMRKRESIVLASCGDGATNTGPFHEALNMASVQKLPLVLVIENNGYAYSTPGYKQFNV 191 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 S+R ++NIPG VDG D+ AV + +A + RA GP I+E T+R RGHS +D Sbjct: 192 QQLSERAKAYNIPGETVDGNDVLAVIEAVSRAGEHARAGNGPAIVECKTFRVRGHSEADK 251 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 A+Y +E+ E DPI + L + + ++E +R+I +++V +A+ E Sbjct: 252 ADY-VPKELREEWLKKDPITRFEAYLEQERLLTARKKAQMEARIREICDDAVRYAEQSPE 310 Query: 353 PDPA 356 PD A Sbjct: 311 PDVA 314 >gi|258591514|emb|CBE67815.1| Similar to pyruvate dehydrogenase (Lipoamide) E1 component alpha chain [NC10 bacterium 'Dutch sediment'] Length = 323 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 162/315 (51%), Gaps = 1/315 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + ++ L+ Y + L R E++ LY G + G +L G+EA+ VG +L D Sbjct: 3 VRKPAPDELLNIYYYLKLTRGMEQRVITLYRQGKIVGGVYLGNGEEAIAVGSASALERDD 62 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +R+ G L G+ + M RQ G+++G+ G++H G G + Sbjct: 63 VIAPTHRDLGANLVKGITPKEYMTHYLARQTGLTRGRDGNVHFGDITRGIIGFISPMADL 122 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G+A K RR ++ FGDGA+++G +E+ N+AA+ L V+++ NNQYA Sbjct: 123 LPVAAGVALTFKLRRERRVVAAFFGDGASSRGDFHEALNLAAVLKLPVVFICHNNQYAYS 182 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T +SR A + + R ++ +PG+ VDG D+ AV + +A+A RA GP ++E T R Sbjct: 183 TPLSRQMAIEHVADRAKAYGMPGIIVDGNDVLAVHDAVAEAIARARAGDGPSLVEGKTMR 242 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 RGH+ D A+Y + E R DPI++ L K + K I+ + K I + Sbjct: 243 MRGHAEHDDASYVPPGLLEEWR-KRDPIDRFAACLRDRKILDDASAKTIDDRIAKEIEEA 301 Query: 344 VEFAQSDKEPDPAEL 358 V FA+S PD EL Sbjct: 302 VLFAESSPLPDAKEL 316 >gi|288915932|ref|ZP_06410314.1| dehydrogenase E1 component [Frankia sp. EUN1f] gi|288352561|gb|EFC86756.1| dehydrogenase E1 component [Frankia sp. EUN1f] Length = 395 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/311 (30%), Positives = 161/311 (51%), Gaps = 1/311 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M LI +++ Q G + + G E + ++L DQ+++ YR Sbjct: 77 LRLYRSMRLIAAVDQRINQEVRAGTLNAATYPVRGLEGSCAAVGLNLRPVDQLVSTYRNL 136 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G LA G ++AE+ GR G SKGKGG+MH+ GF GIVG+ + + G+ Sbjct: 137 GDALAKGSSLDALVAEIYGRLTGASKGKGGAMHLQDQSVGFVTSTGIVGSGIPIAVGLGV 196 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + SD++ V FGDGA + G +ES N+A+LW L VI+V +NNQ+ T ++ +A Sbjct: 197 AAQLDGSDRVVVTTFGDGATSIGAFHESMNLASLWRLPVIFVCQNNQWGEHTPIAEYAAS 256 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T+ + R ++ + +VDG D A + AV R +GP +E++TYR GHS Sbjct: 257 TDLAGRAAAYAMASARVDGFDPIATALEVRVAVERARRGEGPTFLEVVTYRLTGHSGVSD 316 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 +Y ++ + DP+ R+R++ A +++EI+ + ++ + A + Sbjct: 317 YSYVPKDALARAL-ERDPVPTFRRRMVEQGVAPVAEIEEIDSQIAAEVDAAFSKALEEPF 375 Query: 353 PDPAELYSDIL 363 P P+E ++D+ Sbjct: 376 PPPSERFTDVF 386 >gi|284045768|ref|YP_003396108.1| pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] gi|283949989|gb|ADB52733.1| Pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] Length = 320 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 114/304 (37%), Positives = 172/304 (56%), Gaps = 11/304 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M IRRFEE+ L + G H IGQEAV G+ +L + D + + +R HGH+ Sbjct: 6 YRTMRTIRRFEEQIVTLVNANEIAGVTHEYIGQEAVATGVCAALRDDDVITSTHRGHGHV 65 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G D +++MAEL GR G+++ +GGSMH+ G YG +GIV A + G A+A Sbjct: 66 IAKGADVARMMAELLGRTTGLNRARGGSMHIADVSLGIYGANGIVAAGAPIAAGAAWAGV 125 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 SD++ V FGDGA NQG ++ES N+A +W L V++V ENN YA+ + + A+A + Sbjct: 126 QAGSDRVAVCFFGDGAVNQGVLHESMNMATIWRLPVLFVCENNGYAVSFAQAEATAGS-L 184 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-- 293 R ++ + +VDGMD AV A AVA RA +GP +E TYR+ GH ++ Sbjct: 185 VARAAAYGMAAERVDGMDAEAVLAAAGAAVARARAGEGPSFLECETYRFVGHHTAEATMG 244 Query: 294 -NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR+ EEI R DP+ + RL + + I+ V +++ +++ FA+ Sbjct: 245 LGYRSDEEIARWR-ERDPLAVLAARLDADA------VAAIDAQVEELLRDALAFARESPR 297 Query: 353 PDPA 356 P+P+ Sbjct: 298 PEPS 301 >gi|71281495|ref|YP_269750.1| TPP-dependent acetoin dehydrogenase complex, E1 component subunit alpha [Colwellia psychrerythraea 34H] gi|71147235|gb|AAZ27708.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Colwellia psychrerythraea 34H] Length = 328 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 166/320 (51%), Gaps = 12/320 (3%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKM 97 + Q + YR ML+ R EE+ +Y G + G HL GQE VG+ Sbjct: 4 TESQRIWMYRNMLISRYMEERIESIYMEGKKPVFNMANGPIPGEMHLSNGQEPCAVGVCA 63 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 L D + +R H +A GVD +K+MAE+ G++ G+S G+GG MH+F F Sbjct: 64 HLKAEDVVTATHRPHHIAVAKGVDLNKMMAEIFGKKTGLSGGRGGHMHLFDNDVNF-ACS 122 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GI+ + G A + K ++ I + G+GAANQG +E+ N+A++W L VI++IE+ Sbjct: 123 GIIAQGMGPAVGAALSRKLQKKSGIAISYIGEGAANQGAFHETLNLASVWKLPVIFIIED 182 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N + + + S ++A S R S+++PG+ ++ + + +A+ R +GP +I Sbjct: 183 NDWGISVAKSTSTAVEKNSIRAASYDMPGIHIEDNCPDKIFSATKEAIERARRGEGPSLI 242 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E+ T R GH M D +YR + E +++ DPI R++L+ K + D + + Sbjct: 243 EIKTSRLAGHFMGDAEDYRPKGEKDKL-VKEDPIPTYRQKLIDAKVITLDDDLVLVEETQ 301 Query: 338 KIINNSVEFAQSDKEPDPAE 357 +I+ ++ FA+ + P P E Sbjct: 302 QIVEQAITFARDSEYPQPEE 321 >gi|220682033|gb|ACL80142.1| putative pyruvate dehydrogenase [Catenuloplanes nepalensis] Length = 311 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 106/264 (40%), Positives = 142/264 (53%), Gaps = 6/264 (2%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M LIR FEE + G + G H IGQEAV VG+ L D + + +R HGH+LA Sbjct: 1 MRLIREFEEHCLEKALAGTIVGGIHPYIGQEAVAVGVSAHLRADDVITSTHRGHGHVLAK 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL-GTGIAFANKYR 177 G D + +AEL G G+++G+GGSMH G YG +GIVGA + A + Sbjct: 61 GADPKRALAELYGASTGLNRGRGGSMHAADVGLGIYGANGIVGAGAPIAVGAAWAARRAG 120 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 D++ V FGDGA +QG V E+FN+AALW+L V++V ENN YA V R A + Sbjct: 121 HDDRVAVAFFGDGALSQGVVLEAFNMAALWSLPVLFVCENNGYATSLPVDRGLAGDPV-R 179 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD---PAN 294 R F + VDGMD+ AV +AVA CR GP +E TYR+ GH + Sbjct: 180 RAAGFGLTAAAVDGMDVEAVAEAAGQAVAACRTGAGPHFLECATYRFHGHHTVEHLMGTK 239 Query: 295 YRTREEINEMRSNHDPIEQVRKRL 318 YR +E+ R+ DP+ + R L Sbjct: 240 YRDDDEVAGARAR-DPLTRQRAWL 262 >gi|171686860|ref|XP_001908371.1| hypothetical protein [Podospora anserina S mat+] gi|170943391|emb|CAP69044.1| unnamed protein product [Podospora anserina S mat+] Length = 314 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 84/172 (48%), Positives = 115/172 (66%), Gaps = 2/172 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K+Q Y+ M+++R+ E A +LY + GFCHL GQEAV VG++ ++ + D + Sbjct: 77 EVTKKQLKQMYKDMVVVRQMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAINKSDDV 136 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YR HG G I+ EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV Sbjct: 137 ITSYRCHGFAYMRGGTVRSIIGELLGRREGIAYGKGGSMHMFA--KGFYGGNGIVGAQVP 194 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 +G G+AFA KY K V+ +GDGA+NQGQV+E+FN+A LW L ++ E+ Sbjct: 195 VGAGLAFAQKYTGGKKATVILYGDGASNQGQVFEAFNMAKLWKLPALFGCES 246 >gi|168703858|ref|ZP_02736135.1| putative acetoin dehydrogenase (TPP-dependent) alpha chain [Gemmata obscuriglobus UQM 2246] Length = 321 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 109/311 (35%), Positives = 160/311 (51%), Gaps = 10/311 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR + IRR EE+ ++Y + HL IGQEAV VG+ L D + YR H Sbjct: 6 YRSLYRIRRVEEEIARVYATDKIKSPVHLSIGQEAVSVGVCDVLRPDDVVFGTYRGHAMY 65 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G + ++AEL G+ ++GKGGSMH+ T+ G G +VG ++ G A+A K Sbjct: 66 LAKGENMRAMVAELYGKVTRSTRGKGGSMHLIDTECGVMGTSAVVGTTIANAAGYAYALK 125 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 RRSD + V FGDGA +G E+ N A L L V++V ENN YA+ T+ S+ + Sbjct: 126 VRRSDAVVVCFFGDGATEEGVFAETLNFAVLKKLPVLFVCENNGYAIHTAQSKRQGLPDI 185 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH---SMSDP 292 R ++ +P ++DG D+ ++ VA RA GP +E TYR+R H Sbjct: 186 CARARAYGMPAERLDGNDVLTLRDKAADLVAQLRAGAGPQFLEATTYRWREHVGPGQDFK 245 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR++ E E DP+ R+L + ++ K IE + + + EFA+S Sbjct: 246 LGYRSQAEC-ERWYESDPV-----RVLAAQLPADVRTK-IEAAAEREVAAAFEFAESSPF 298 Query: 353 PDPAELYSDIL 363 P P+EL +DI Sbjct: 299 PHPSELMTDIF 309 >gi|332969699|gb|EGK08715.1| pyruvate dehydrogenase complex E1 component alpha subunit [Desmospora sp. 8437] Length = 358 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 166/318 (52%), Gaps = 11/318 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + KE++L +R M+ +R F+ +A L G +G + L GQEA VG ++L++ D + Sbjct: 28 KLPKERKLDFHRWMVQVRTFDRRAVILQRQGRIGTYAPLE-GQEAAQVGSALALSQEDWI 86 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +YREHG + G+ S+I+ GR G G + + + Q+ Sbjct: 87 FPSYREHGVAMIAGMPLSQILLYWMGRVEGNLAPPGVRL---------LPPYVPIATQMP 137 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A+A++ +R I V FGDGA ++G +E+ N A ++ L VI+ +NN YA+ Sbjct: 138 QAMGAAWASRLKRESAISVAYFGDGATSEGDFHEACNFAGVFRLPVIFFCQNNHYAISVP 197 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +R SA ++R ++NI G++VDG D+ AV M++AV R KG +IE +TYR Sbjct: 198 FTRQSAVPTVAERAAAYNIRGIRVDGNDVLAVYTAMEEAVTCARDGKGATLIEAVTYRKG 257 Query: 286 GHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 H+ + D A YR E+ E N DPI ++ K L +E +++E E + + +V Sbjct: 258 SHTTADDAARYREPAEVEEWVRNRDPIPRLEKLLQAEGLLTEAEIREWEEQCAERVEQAV 317 Query: 345 EFAQSDKEPDPAELYSDI 362 + A+S P L++ + Sbjct: 318 KEAESSPAPPADHLFAHV 335 >gi|254775420|ref|ZP_05216936.1| dehydrogenase E1 component superfamily protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 330 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 95/279 (34%), Positives = 150/279 (53%), Gaps = 11/279 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI-----GQEAVIVGMKMSLTEGDQMITAYR 110 Y LM+L++ +++ + G G LC+ GQEA+ M ++L DQ++T YR Sbjct: 16 YALMVLMKTADDRLSRGIGTGE-----FLCVYWPSRGQEAIAAAMGVTLRPDDQLVTTYR 70 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 ++ GV +I E+ GR G +GKGG+MH+ + G GIVGA + G+ Sbjct: 71 GLHDLIGKGVGLEEIYGEMMGRTIGAGRGKGGTMHIAKPEVGVMLSTGIVGAGPPVAVGL 130 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A + + D++ VV FGDGA N G +E+ N+AALW+L +++V +NN+YA T + Sbjct: 131 AMAARRKGLDRVTVVSFGDGATNTGSFHEAANMAALWDLPIVFVCQNNRYAEMTPTTDTM 190 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + R + +PG++VDG D AV A +D A+ RA GP +E T+R+RGH + Sbjct: 191 KLEHVADRAAGYGMPGVRVDGNDPLAVTAALDDALRRARAGSGPTFLECETFRFRGHYFA 250 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 D Y + + DP+ + R+RL E +L Sbjct: 251 DRMPY-IPADQLQAALAADPVPRFRRRLAETGVCGEAEL 288 >gi|170727273|ref|YP_001761299.1| pyruvate dehydrogenase [Shewanella woodyi ATCC 51908] gi|169812620|gb|ACA87204.1| Pyruvate dehydrogenase (acetyl-transferring) [Shewanella woodyi ATCC 51908] Length = 329 Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 100/324 (30%), Positives = 162/324 (50%), Gaps = 12/324 (3%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMSL 99 EQ YR ML+ R EE+ +Y G + G HL GQE VG+ L Sbjct: 6 EQRRWMYRNMLISRYMEERIETIYMEGKKPIFNMANGPIPGEMHLSNGQEPCAVGVCCHL 65 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 D + +R H +A GVD K+MAE+ G++ G+S G+GG MH+F K+ + GI Sbjct: 66 GTEDIVTATHRPHHIAIAKGVDLKKMMAEIFGKKTGLSGGRGGHMHLFD-KDVNFACSGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + + G A + K +R I + G+GAANQG +E+ N+A++W L VI++IE+N Sbjct: 125 IAQGMGPAVGAALSRKLQRKSGIAIAYIGEGAANQGAFHETLNLASVWKLPVIFIIEDND 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 + + + S +++ + S R ++ +PG+ + + + AV R GP +IE+ Sbjct: 185 WGISVAKSTSTSVSKNSDRAAAYGMPGIFIKDNCPDQIFSATAAAVEQARCGDGPTLIEI 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 T R GH M D +YR + E + N DPI R+ LL + + + +++ Sbjct: 245 KTSRLAGHFMGDAEDYRPKGEKENLLKN-DPIPTYRQALLDEDVITIEEDSALVQETQQL 303 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 I +++ FA+ EP P E + Sbjct: 304 IEDAITFARESDEPAPEEALEHVF 327 >gi|296086481|emb|CBI32070.3| unnamed protein product [Vitis vinifera] Length = 197 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 84/182 (46%), Positives = 125/182 (68%), Gaps = 10/182 (5%) Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPG 246 +GDGAANQGQ++E+ NIAAL +L I V ENN Y MGT+ RA+ + KRG +PG Sbjct: 2 YGDGAANQGQLFEALNIAALLDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDY--VPG 59 Query: 247 MQVDGMDIRAVKATMDKAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP-ANYRTREEIN 302 ++VDGMD AVK +A + + H GPII+EM TYRY GHSMSDP + YRTR+EI+ Sbjct: 60 LKVDGMDALAVK----QACRFAKEHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEIS 115 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +R DPIE++RK +L ++ ++E +LK IE +R +++++ A+ P+P+EL++++ Sbjct: 116 GVRQERDPIERIRKLILSHELSTEAELKSIEKKIRSEVDDAIAQAKESSMPEPSELFTNV 175 Query: 363 LI 364 + Sbjct: 176 YV 177 >gi|292657066|ref|YP_003536963.1| 2-oxo-3-methylvalerate dehydrogenase E1 component subunit alpha [Haloferax volcanii DS2] gi|4958989|gb|AAD34202.1|AF068743_1 pyruvate decarboxylase E1 alpha subunit [Haloferax volcanii] gi|291370958|gb|ADE03185.1| 2-oxo-3-methylvalerate dehydrogenase E1 component alpha subunit [Haloferax volcanii DS2] Length = 368 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 99/324 (30%), Positives = 167/324 (51%), Gaps = 17/324 (5%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 EV + + E + YR M L R F+ +A L G +G + L GQE +G ++L E Sbjct: 24 EVPDIDDETLVEMYRYMRLARHFDTRAVSLQRQGRMGTYPPLS-GQEGAQIGSAIALDEQ 82 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D M+ +YREHG L G+ + + G + G +G ++ + + + Sbjct: 83 DWMVPSYREHGASLLRGLPLKQTLLYWMGHEKGNEMPEGVNLFPPAVP---------IAS 133 Query: 163 QVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ TG A+A K R D V+C FGDGA ++G +E N A +++ ++ NNQ+A Sbjct: 134 QIPHATGAAWAKKLRGEDDTAVICYFGDGATSEGDFHEGLNFAGVFDTPNVFFCNNNQWA 193 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV----KATMDKAVAYCRAHKGPIII 277 + R +A +++ ++ I G+QVDGMD AV KA +DKA P +I Sbjct: 194 ISVPRERQTASETLAQKATAYGIDGVQVDGMDPLAVYSVTKAALDKAKNPGEGEGRPTLI 253 Query: 278 EMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E + YR+ H+ + DP YR EE+ + ++ DPI ++ L + ++ IE +V Sbjct: 254 EAVQYRFGAHTTADDPTVYRDDEEVEKWKAK-DPIPRLEAFLRETGRIDDEGVEAIEEDV 312 Query: 337 RKIINNSVEFAQSDKEPDPAELYS 360 + + +++E A+SD PDP+E+++ Sbjct: 313 KGRVADAIEAAESDPRPDPSEMFN 336 >gi|119717991|ref|YP_924956.1| pyruvate dehydrogenase (acetyl-transferring) [Nocardioides sp. JS614] gi|119538652|gb|ABL83269.1| Pyruvate dehydrogenase (acetyl-transferring) [Nocardioides sp. JS614] Length = 344 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 104/321 (32%), Positives = 162/321 (50%), Gaps = 14/321 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 L Y M+L R +EE + Y G G++ G HL GQE V G+ LT Sbjct: 27 LDLYETMVLSRTYEEAILREYHADKGPGFDIGKGLIPGEMHLSAGQEPVAAGVCAHLTTD 86 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + +R H +A GVD ++ AE+ GR+ G+ +G+GG MH+F F GI+ Sbjct: 87 DAVTATHRPHHFAVAHGVDLRRMTAEIFGREDGLGRGRGGHMHLFDPDTHFSCS-GIIAE 145 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 G AFA + +D+I V G+GAANQG +ES N+AA W+L V++V+E+N + + Sbjct: 146 GYPPALGQAFAFHRQGTDRIAVAVTGEGAANQGAFHESLNLAARWSLPVVFVVEDNDWGI 205 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +++ + + R ++ IPG +++G D+ V +AVA RA +GP +IE+ T Sbjct: 206 SVPRTASTSVASNADRAAAYGIPGERIEGNDVEGVYDAARRAVARARAGEGPSLIEVHTL 265 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D YR E +HDPI + RL + + I + + Sbjct: 266 RLWGHFEGDAQGYRLDLEDA---PSHDPIPRYETRLREAGVLDDETVTRIRSAASERTED 322 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 ++ FA++ PDPA S + Sbjct: 323 AIAFAKNSPVPDPASATSYVF 343 >gi|118467045|ref|YP_882133.1| dehydrogenase E1 component superfamily protein [Mycobacterium avium 104] gi|118168332|gb|ABK69229.1| dehydrogenase E1 component superfamily protein [Mycobacterium avium 104] Length = 330 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 95/279 (34%), Positives = 150/279 (53%), Gaps = 11/279 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI-----GQEAVIVGMKMSLTEGDQMITAYR 110 Y LM+L++ +++ + G G LC+ GQEA+ M +SL DQ++T YR Sbjct: 16 YALMVLMKTADDRLSRGIGTGEF-----LCVYWPSRGQEAIAAAMGVSLRPDDQLVTTYR 70 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 ++ GV +I E+ GR G +GKGG+MH+ + G GIVGA + G+ Sbjct: 71 GLHDLIGKGVGLEEIYGEMMGRTIGAGRGKGGTMHIAKPEVGVMLSTGIVGAGPPVAVGL 130 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A + + D++ VV FGDGA N G +E+ N+AALW+L +++V +NN+YA T + Sbjct: 131 AMAARRKGLDRVTVVSFGDGATNTGSFHEAANMAALWDLPIVFVCQNNRYAEMTPTTDTM 190 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + R + +PG++VDG D AV A +++A+ RA GP +E T+R+RGH Sbjct: 191 KLEHVADRAAGYGMPGVRVDGNDPLAVTAALEEALRRARAGSGPTFLECETFRFRGHYFG 250 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 D Y + + DP+ + R+RL E +L Sbjct: 251 DRMPY-IPADQLQAALAADPVPRFRRRLAETGVCGEAEL 288 >gi|311899858|dbj|BAJ32266.1| putative dehydrogenase [Kitasatospora setae KM-6054] Length = 324 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 123/305 (40%), Positives = 170/305 (55%), Gaps = 16/305 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M LIR FEE A + G+V G H IGQEAV VG+ +L DQ+ + +R HGH+ Sbjct: 13 YRTMRLIRSFEELALEWVRSGLVVGGTHPYIGQEAVAVGVCAALDPADQLTSTHRGHGHV 72 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D +++AEL GR GG++ G+GGSMH G G +GIVGA + G A+A + Sbjct: 73 LAKGADPGRLLAELLGRVGGLNGGRGGSMHAADFSLGILGANGIVGAGAPIAVGSAWAAR 132 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R + FGDGA NQG + E+ N+A++W ++V ENN YA T++ ASA Sbjct: 133 RRGEPTVVASFFGDGALNQGVLLEALNLASIWRAPAVFVCENNGYA--TTLPAASAVGGS 190 Query: 236 S-KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD--- 291 + R +F IP VDGMD+ AV+A +AV RA GP +E LTYR+ H + Sbjct: 191 ACGRAAAFGIPAETVDGMDVEAVRAAAGRAVERARAGGGPSFLECLTYRFEAHHTMERRF 250 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 +YRT EE+ R DP+ G + EI+ V ++++ + EFA + Sbjct: 251 RLSYRTAEEVASWR-ERDPLATGLP---------TGRMAEIDREVAELLSAAAEFALASA 300 Query: 352 EPDPA 356 EPDPA Sbjct: 301 EPDPA 305 >gi|258654232|ref|YP_003203388.1| dehydrogenase E1 component [Nakamurella multipartita DSM 44233] gi|258557457|gb|ACV80399.1| dehydrogenase E1 component [Nakamurella multipartita DSM 44233] Length = 340 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 1/306 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +++ L YR M+L R E++ +Y G + G + E + VG +L D M Sbjct: 24 DRDLLLRIYRAMVLTRAVEDRMVAMYKGGDLLGSLYTGHWHEGISVGAASTLRADDYMAP 83 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R+ G L G+DA ++MA G+ + G+ G++H G Y + A + Sbjct: 84 IHRDLGAHLYRGMDAWQVMASFMGKATSPTGGRDGTLHYGRLDLGHYNLPSHIPANFPVA 143 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA KYR DK+C+ GDG+ ++ +E+ +++++ +L ++VIENNQ+A T +S Sbjct: 144 TGMAFAAKYRGQDKVCLAFCGDGSTSRADFHEALSMSSVLDLPNVFVIENNQFAYSTPIS 203 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 S FS + ++ IPG+ VDG D+ AV + + V RA KGP I+E +T R GH Sbjct: 204 MQSKSMQFSDKAKAYGIPGVTVDGTDVLAVHDAVAEGVERARAGKGPSIVEGITMRMHGH 263 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + DPA+Y E S DP+E KRL+ + ++ R+ ++ + A Sbjct: 264 AEHDPADYVPPAMFEEW-SKKDPVELFEKRLVAAGVIDQATAEDTRKQARQAAIDARKKA 322 Query: 348 QSDKEP 353 +D P Sbjct: 323 LADPMP 328 >gi|224003531|ref|XP_002291437.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973213|gb|EED91544.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 343 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 22/334 (6%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +K+ + Y+ + L R FE Q Y G + GF HL GQE++ + ++ GD+ Sbjct: 3 ESSKDNLMKIYKALQLARGFENACNQQYMQGKIRGFMHLDNGQESIPALVDYAIKNGDKK 62 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + YREH H +A GVDA ++MAEL ++ G KG GGSMH+F F GG +V Q+ Sbjct: 63 YSYYREHTHAIASGVDAGEVMAELFMKETGSCKGAGGSMHIFDKSTYFQGGWALVSEQLP 122 Query: 166 LGTGIAFANKYRR--------------------SDKICVVCFGDGAANQGQVYESFNIAA 205 G A + R D+I +V G+G A G+ E N AA Sbjct: 123 YAAGAAKSILLDRKLAISDNADFEKQDVAPPADDDRISIVFVGEGGAQNGRTAELLNSAA 182 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 NL ++ ++ +N A+ T + + ++G + +PG+ VDG D V + Sbjct: 183 KDNLPLLLLVIDNGRAINTYTGDVATNGSVYQQGKHYGVPGLFVDGYDAADVAKGGKAVI 242 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR-EEINEMRSNHDPIEQVRKRLLHNKWA 324 Y R+ KGP I+++ TYR+ GHS +DP + R R +E + R+ DPI++ + N Sbjct: 243 DYVRSGKGPAILQVHTYRFNGHSPADPEHERGRKDEKSWARAEQDPIKKFEDKYTANGMF 302 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +E +LKE + V + +V+FA P P EL Sbjct: 303 TEEELKEAKKEVLAEVKAAVKFADDSPMP-PVEL 335 >gi|257056142|ref|YP_003133974.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Saccharomonospora viridis DSM 43017] gi|256586014|gb|ACU97147.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Saccharomonospora viridis DSM 43017] Length = 324 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 109/313 (34%), Positives = 157/313 (50%), Gaps = 14/313 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 L YR M+LIR FEE + Y G G + G HL GQE V G+ LT Sbjct: 7 LELYRTMVLIRTFEEAILREYHADKKPVFDIGAGAIPGEMHLSAGQEPVAAGVCAHLTVD 66 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + A+R H +A GVD ++ AE+ GR G+ KG+GG MH+F F GI+ Sbjct: 67 DAVTAAHRPHHFAIAHGVDLERMTAEIFGRVDGLGKGRGGHMHLFDPDTHFSCS-GIIAE 125 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 G A A + R +D+I V G+GAANQG +ES N+AALW L V++VIE+N + + Sbjct: 126 GYPPALGQALAFQRRGTDRIAVAVAGEGAANQGAFHESLNLAALWKLPVVFVIEDNDWGI 185 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 S ++ T+ + R + IPG +V+ + AV +AVA RA +GP +IE+ T Sbjct: 186 SVPRSASTCVTSNAVRAAGYGIPGKRVEDNSVEAVYEVAGEAVARARAGEGPSLIEVHTL 245 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D YR+ E R DP+ + L + +K + + + Sbjct: 246 RLWGHFEGDAQAYRSDLEGLPGR---DPLPTYERELRTAGVLDDDAVKSVAAEASERVEA 302 Query: 343 SVEFAQSDKEPDP 355 ++ FA+ EP P Sbjct: 303 AIAFAKRSPEPSP 315 >gi|331698726|ref|YP_004334965.1| pyruvate dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326953415|gb|AEA27112.1| Pyruvate dehydrogenase (acetyl-transferring) [Pseudonocardia dioxanivorans CB1190] Length = 337 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 109/285 (38%), Positives = 153/285 (53%), Gaps = 8/285 (2%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLLIRR EE+ G + G HL IG+EAV VG LT+ D + + +R HGH LA Sbjct: 25 MLLIRRAEERLIVACADGSLPGGVHLYIGEEAVAVGACSVLTDRDYITSTHRGHGHFLAK 84 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G D + AE+ G+ GI KG GGSMH+ G G +GIVGA ++ TG A+ + Sbjct: 85 GGDLDAMFAEIWGKATGICKGMGGSMHVADVSKGILGANGIVGAGFAIATGAAWGARLEG 144 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ FGDGAANQG ES N++A W L +++ ENN + T S + + R Sbjct: 145 EGRVATCFFGDGAANQGSFMESMNVSAAWELPTVFLCENNGVSEFTVTSTVTGGV-LADR 203 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-----SMSDPA 293 +F +P VDG D+ AV+A + AV RA GP +E TYR RGH M Sbjct: 204 ARAF-MPVEVVDGNDVLAVRAAVGAAVERARAGGGPSYVEATTYRIRGHLEAEQHMLGGG 262 Query: 294 NYRTREEINEMRS-NHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 YR+ +EI ++ + DP+ + +RLL +L+ I+ +VR Sbjct: 263 TYRSADEIAAWQADDRDPVLRSARRLLDAGICDAAELERIDADVR 307 >gi|331697512|ref|YP_004333751.1| pyruvate dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326952201|gb|AEA25898.1| Pyruvate dehydrogenase (acetyl-transferring) [Pseudonocardia dioxanivorans CB1190] Length = 326 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 88/266 (33%), Positives = 139/266 (52%), Gaps = 1/266 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ R++ +R FEEK +L G G HL IGQE V G D + YR H Sbjct: 17 LTDLRMVWRMRAFEEKVRELRLAGDAVGSIHLGIGQEGVATGASGLAGPQDAVFATYRGH 76 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 ++CGV + E+ GR GI+ G+GGS H+ + F+G + IVGA + G A Sbjct: 77 SWAISCGVPVEALFGEILGRDTGINGGRGGSAHLTAPAYRFFGENSIVGAGAPIACGAAL 136 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A ++ SD++ + FGDGA NQG V+E+ N A+ ++L V+++ ENN ++ T + Sbjct: 137 AGRHDGSDRVALTVFGDGAMNQGAVHEAMNFASAFSLPVVFLCENNSWSELTPIDEMVRD 196 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +R ++ +PG ++DG D + V+ + A R GP ++E +T R GH + D Sbjct: 197 PELFRRAAAYGMPGERIDGNDPQEVRERLGDAFEVAREGGGPTLVEAMTQRLVGHYIGDA 256 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRL 318 YR R E + +P+ + +RL Sbjct: 257 DQYR-RPGERERDAEREPVALLTRRL 281 >gi|117956076|gb|ABK58621.1| dehydrogenase [Azoarcus anaerobius] Length = 740 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 106/309 (34%), Positives = 157/309 (50%), Gaps = 25/309 (8%) Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACG- 119 L+R FEE L +G+V G H IGQE VG M L D + A+R H L G Sbjct: 40 LVRAFEEAVLNLEKLGLVHGPAHSSIGQEGGAVGSVMLLNSSDMITGAHRGHHQFLVKGM 99 Query: 120 --VDAS------------------KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +D+ + +AE+ G G KG+GGSMH+ + G G + I Sbjct: 100 QHIDSPSYDPRAAPLPEEVQTFLYRTLAEILGLSDGFCKGRGGSMHLRWVEAGAMGTNAI 159 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VG V + G+A+A K R ++ FGDG N G V ES N+AALWNL + + IENN Sbjct: 160 VGGGVPIANGLAWAQKRRNKGEVTFTFFGDGGMNIGAVPESMNLAALWNLPICFFIENNG 219 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ T++ + +T S RG ++ IP +VDGMD AV+ + A+ RA KGP IIE Sbjct: 220 YAVSTTLEEETRETRLSSRGGAYAIPAWRVDGMDPVAVRLASEAAIERMRAGKGPTIIEA 279 Query: 280 LTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 + YRY H S + YR ++E + + DP+++ + +++ +W + + I + Sbjct: 280 VLYRYFHHGGSVAGSAFGYRKKDEESSWIAK-DPLDRTVREMINLQWLTADENTAIRRHC 338 Query: 337 RKIINNSVE 345 + VE Sbjct: 339 ESAMQGIVE 347 >gi|295400169|ref|ZP_06810149.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus thermoglucosidasius C56-YS93] gi|312110589|ref|YP_003988905.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacillus sp. Y4.1MC1] gi|294977948|gb|EFG53546.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus thermoglucosidasius C56-YS93] gi|311215690|gb|ADP74294.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. Y4.1MC1] Length = 356 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 91/319 (28%), Positives = 162/319 (50%), Gaps = 11/319 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + KE ++ YR ++ R F+ K L G +G + GQEA VG ++L +GD M Sbjct: 25 QMTKELVMTMYRHLIRTRTFDRKCVSLQRQGRIGTYVPY-EGQEACQVGSALALCDGDWM 83 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 YR+HG ++ G +I+ GR G G + S + Q+ Sbjct: 84 FPTYRDHGAMMTFGCSLMQILLYWKGRTEGCVPPAGKKIVPPSVP---------IATQLP 134 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A+A K + + +V FGDGA ++G +E N A+++N+ V++ +NNQYA+ Sbjct: 135 HAAGAAYAEKRKGTKNAVIVYFGDGATSEGDFHEGLNFASVFNVPVVFFNQNNQYAISVP 194 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 ++R +++ ++++IPG+++DG DI AV +A+ R +GP +IE +T+RY Sbjct: 195 ITRQMKSKTIAQKALAYDIPGIRIDGNDIFAVYFETQQALERARNGRGPTLIEAVTWRYG 254 Query: 286 GHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 H+ S DP+ YR +EE R DPI+++ + + W E +++ V I +V Sbjct: 255 AHTTSDDPSKYRDQEESKRRRETTDPIKRMERFMQREGWWDEKWANQVQEEVSMEIEQAV 314 Query: 345 EFAQSDKEPDPAELYSDIL 363 + + +PA+++ + Sbjct: 315 AEMERYPKANPADMFDYVF 333 >gi|89098385|ref|ZP_01171269.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Bacillus sp. NRRL B-14911] gi|89086934|gb|EAR66051.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Bacillus sp. NRRL B-14911] Length = 343 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 101/321 (31%), Positives = 162/321 (50%), Gaps = 11/321 (3%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 S F+ E L YR ++ IR F+ KA L G +G + GQEA +G M+L E D Sbjct: 12 TSGFDTELALEFYRQLVRIRVFDRKAVSLQRQGRIGTYAPFE-GQEAAQIGSAMALEESD 70 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M YR+HG LA G ++ GR G +G KN F G I Q Sbjct: 71 WMFPTYRDHGAALAFGHSMRNVLLFWNGRNEGCIPPEG--------KNIFPPGIPIA-TQ 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G A+A K + + K +V FGDGA ++G +E N A++ V++ +NNQYA+ Sbjct: 122 IPHAAGAAYAEKRKGTKKAAIVYFGDGATSEGDFHEGLNFASIVKAPVVFFNQNNQYAIS 181 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 +S+ +++ ++++IPG++VDG D+ AV KA+ R GP +IE +T+R Sbjct: 182 VPLSKQMNTKTIAQKSLAYDIPGVRVDGNDVFAVYRETKKALERAREGGGPTLIEAVTWR 241 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 Y H+ + DPA YR ++E + +R DPI ++ + L + E K E I+ Sbjct: 242 YGAHTTADDPAKYRDQQESSVLRGKIDPILRMERWLKNKDLYDENWAKRAESEAAAEIDL 301 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 ++ ++ DPA+++ + Sbjct: 302 AIAEMEAYPPADPADIFDHVF 322 >gi|240273802|gb|EER37321.1| pyruvate dehydrogenase E1 component alpha subunit [Ajellomyces capsulatus H143] Length = 410 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 118/347 (34%), Positives = 172/347 (49%), Gaps = 80/347 (23%) Query: 35 DIPFL-----EGFEVSEFNK--------EQELSA-YRLMLLIRRFEEKAGQLYGMGMVGG 80 D PF E FE E + +QEL YR M+ IRR E A +LY + G Sbjct: 108 DKPFTVKLSDESFETYELDPPPYTLETTKQELKQMYRDMVSIRRMEMAADRLYKEKKIRG 167 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEAV G++ ++T+ D++ITAYR H G + + Sbjct: 168 FCHLSTGQEAVATGIEHAITKDDKLITAYRCH----------------------GFALLR 205 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GG++ I+G + GIA+ G G + Sbjct: 206 GGTVK------------SIIGELLGRREGIAY---------------GKGGSMH------ 232 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 ++ N Y +N+Y MGT+ +RA+A T++ KRG IPG++++GMD+ A+KA Sbjct: 233 -----MFAKN-FYGGNDNKYGMGTAANRAAALTDYYKRGQY--IPGLKINGMDVLAIKAA 284 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 + Y + KGP++ E +TYRY GHSMSDP YRTREEI MRS +DPI ++++LL Sbjct: 285 VQYGREYTTSGKGPLVFEYVTYRYGGHSMSDPGTTYRTREEIQRMRSTNDPIAGLKQKLL 344 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--PAELYSDILI 364 SE +LK I+ + RK +++ V A+ EPD P L+ D + Sbjct: 345 DWGVTSEEELKAIDKDARKYVDDEVAEAELMTEPDATPRILFEDTYV 391 >gi|307295796|ref|ZP_07575629.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphingobium chlorophenolicum L-1] gi|306878452|gb|EFN09673.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphingobium chlorophenolicum L-1] Length = 729 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 106/279 (37%), Positives = 149/279 (53%), Gaps = 24/279 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+LIR FEEK +L G G+V G H IGQE G +++ DQ+ ++R H LA Sbjct: 40 MVLIRAFEEKVLELAGQGLVHGPAHSAIGQEGGATGSVLAMRASDQVNGSHRAHHQFLAK 99 Query: 119 GVD--------------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 + A + ++E+ G G KG+GGSMH+ ++G G + Sbjct: 100 ALHYVAPEGLASSAPFTGELRTIADRALSEILGLARGYCKGRGGSMHLRWAESGNLGTNA 159 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V G A+A+K + + FGDGA N G V E+ NIAA W L + + IENN Sbjct: 160 IVGGGVPGAAGAAWAHKRAGTGDVAFTYFGDGAVNIGSVLETMNIAAAWKLPLCFFIENN 219 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ TSV +A+T S RG++F IP +VDGMD AV +AV RA +GP IIE Sbjct: 220 RYAVSTSVEEVTAETRLSSRGLAFGIPAWKVDGMDPLAVYLATQEAVRTMRAGEGPAIIE 279 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQV 314 YRY + P + YR+++E +M DPI++V Sbjct: 280 ADVYRYFHQNGPLPGSAFGYRSKDE-EKMWRERDPIDRV 317 >gi|296164755|ref|ZP_06847318.1| possible pyruvate dehydrogenase (acetyl-transferring) [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899888|gb|EFG79331.1| possible pyruvate dehydrogenase (acetyl-transferring) [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 337 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 99/319 (31%), Positives = 159/319 (49%), Gaps = 14/319 (4%) Query: 52 ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI-----GQEAVIVGMKMSLTEGDQMI 106 E Y LM L++ +++ + G G +C+ GQEA+ M ++L DQ++ Sbjct: 16 ERRLYELMALMKAADDRLSKGIGTGEF-----MCVYWPSRGQEAIAAAMGVALRPDDQLV 70 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR ++ GV +I E+ GR G +GKGG+MH+ + G GIVGA + Sbjct: 71 TTYRGLHDLIGKGVPLEEIYGEMMGRTVGAGRGKGGTMHIANPDKGVMLSTGIVGAGPPV 130 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A A + R SD++ VV FGDGA N G +E+ N+AALW+L ++++ +NN YA T Sbjct: 131 AVGLAMAAQRRGSDRVTVVSFGDGATNTGSFHEAANMAALWDLPMVFLCQNNLYAEMTPT 190 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV---AYCRAHKGPIIIEMLTYR 283 S + + R + +PG++VDG D AV++ +D A+ GP IE +T+R Sbjct: 191 SDTMKLEHVADRAAGYGMPGVRVDGNDPLAVRSALDDALRRARAGGNGGGPTFIECVTFR 250 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGH D Y +++ + DP+ + R LL +L I+ + + Sbjct: 251 FRGHYFGDRMPYIPEDQLAAAMAA-DPVPRFRGHLLDAGICDADELDRIDREALAAVETA 309 Query: 344 VEFAQSDKEPDPAELYSDI 362 + P EL D+ Sbjct: 310 LHTVLGADSPAIDELDRDV 328 >gi|145355429|ref|XP_001421964.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582203|gb|ABP00258.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 380 Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 99/316 (31%), Positives = 159/316 (50%), Gaps = 13/316 (4%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + + E AY M L R FE + Q Y G + GF HL GQE++ + ++ + D Sbjct: 69 DLSDEDLNKAYYTMQLCRDFENECNQAYMAGKIRGFMHLDNGQESIPALLADAIRKDDLK 128 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + YR+H H LACGVD+ +MAEL G+ GG +G GGSMH++ F GG +V Q+ Sbjct: 129 HSYYRDHCHALACGVDSGAVMAELFGKDGGTCRGTGGSMHVYDMDTNFQGGWALVAEQLP 188 Query: 166 LGTGIAFA-------NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 G A + + D++ VV G+G A G++ E N AA NL +++++ +N Sbjct: 189 YAVGAARSIVLDKMLGRDDAHDRVTVVFVGEGGAQNGRMAECLNAAAKENLPILFLVIDN 248 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 A+ T + +G + +PG+ VDG +++ V A+ + R KGP I++ Sbjct: 249 GRAINTFTKDVATNQEVFNQGKHYGVPGVLVDGQNVQDVLRVGRAAIKHVRT-KGPAILQ 307 Query: 279 MLTYRYRGHSMSDPANYRTR-EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 + T+R+ GHS +DP + R R +E R+ DPI K + A DL + Sbjct: 308 VHTFRFNGHSPADPEHERNRKDEKRWARAECDPI----KIFEESADAKRIDLGAQTAKAK 363 Query: 338 KIINNSVEFAQSDKEP 353 + + ++ FA + P Sbjct: 364 EEVQRALAFADASPPP 379 >gi|88812836|ref|ZP_01128081.1| Pyruvate dehydrogenase (lipoamide) [Nitrococcus mobilis Nb-231] gi|88789906|gb|EAR21028.1| Pyruvate dehydrogenase (lipoamide) [Nitrococcus mobilis Nb-231] Length = 364 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 100/319 (31%), Positives = 165/319 (51%), Gaps = 14/319 (4%) Query: 44 VSEFNKE--QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 + EF +E Q ++AYR M R F+ KA L G +G F C+G+EA+ V + +++ Sbjct: 33 LPEFAREPVQLIAAYRAMASARAFDRKAINLQRTGQLGTFAS-CLGEEAIAVAVGLAMRP 91 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D ++ YR HG L+ GV MAEL GG +G M S + F I Sbjct: 92 EDVLLPMYRHHGAYLSRGVR----MAELLAYWGGDERG----MDFQSVREDFAVAVPI-A 142 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q G+ +A KYR+ ++ V GDGA ++G YE+ N A +W L V++V+ NN +A Sbjct: 143 TQAPHAVGVGYAFKYRKEPRVAVCLLGDGATSKGDFYEAINAAGVWELPVVFVVANNLWA 202 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + + S +++ ++ G QVDG D AV+ +D+A+ R+ +GP +IE LT Sbjct: 203 ISVPRTLQSRAQTLAQKAIAAGFEGEQVDGNDYIAVRDRLDQALQRARSGQGPCLIEALT 262 Query: 282 YRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YR H+ +D + YR EE+ E DP++++R LL + SE D + +++ ++ Sbjct: 263 YRMGDHTTADDSRRYRDAEEV-EAWQRRDPLDRLRGYLLQSGAWSEADEEALQVECQEAA 321 Query: 341 NNSVEFAQSDKEPDPAELY 359 + + + PA ++ Sbjct: 322 DQAAQLYLERPLQPPASMF 340 >gi|91200017|emb|CAJ73059.1| similar to pyruvate dehydrogenase (lipoamide) E1 component alpha chain [Candidatus Kuenenia stuttgartiensis] Length = 325 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 152/312 (48%), Gaps = 1/312 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K+ L Y + L RR E++ LY G + G G EAV VG +L + D Sbjct: 2 EIKKDDLLQMYYYLKLTRRLEDRVTSLYHQGKIMGGAWTSNGTEAVSVGYGYALEKDDIA 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +R+ G L G+ A +I+A+ G++ G++ GK G++H+ K G G + Sbjct: 62 APYFRDMGVFLIRGISAKRIIAQYFGKKTGVTGGKEGNVHIGDMKYGVVGFPSHLADNYP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+A A K R K+ C GDG ++G +E N A++ L +++ NNQYA T Sbjct: 122 VGAGVALAFKIRGEKKVVAACTGDGGTSRGDFHEGMNFASVRKLPIVFFCNNNQYAYSTP 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + ++R ++ +PG VDG ++ V +A R GP IE T R Sbjct: 182 LRLQMNIKDVAERAAAYGMPGKIVDGNNVVEVYMAAKEAYEVARNGGGPTFIECKTMRMH 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS D A Y RE + E + DPI + + L A + +L I+ V+K I+ + Sbjct: 242 GHSEHDSAKYVPRELLEEWKKK-DPITNMERYLTEKNIAGKEELDGIDSRVKKEIDEAEA 300 Query: 346 FAQSDKEPDPAE 357 FA+ PDPA+ Sbjct: 301 FAEESPYPDPAD 312 >gi|83950211|ref|ZP_00958944.1| 2-oxoisovalerate dehydrogenase beta subunit [Roseovarius nubinhibens ISM] gi|83838110|gb|EAP77406.1| 2-oxoisovalerate dehydrogenase beta subunit [Roseovarius nubinhibens ISM] Length = 746 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 100/332 (30%), Positives = 157/332 (47%), Gaps = 35/332 (10%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 + LIR FEE+ +L G++ G H IGQE VG+ +LT GD++ +R H LA Sbjct: 52 LFLIRHFEERLLELSKEGLLHGPAHASIGQEGAAVGLMSALTSGDKINGTHRMHHQFLAK 111 Query: 119 GVDAS---------------------KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 ++ + K +E+ G + G G+GGSMH+ + G G + Sbjct: 112 TLNHALVAEYDPLDQGFPQAAQEVVFKTYSEILGLKSGYCGGRGGSMHLREPEAGVLGSN 171 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 IVG + G A A+K R I V FGDGA G YE+ N+AAL+ ++V+EN Sbjct: 172 AIVGGNIPHAVGYALADKMRGERAISVAFFGDGAMQIGTAYEAMNLAALYTTPTVFVVEN 231 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 NQYA+ T VS + +T S RG+ IP + DGMD+ A + M+ A GP+++ Sbjct: 232 NQYAVSTHVSEQTRETRLSLRGLGLGIPSITFDGMDVIAARRAMETARKIIETSGGPVLL 291 Query: 278 EMLTYRY---RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 E TYR+ G YR + E + + DP + +++L +E + + Sbjct: 292 EARTYRHLHQSGPLKGSAFGYRDKAEEDAWLAR-DPATTLPQQILRAGLLTEAQIDTLRS 350 Query: 335 NVRKIINNSVE----------FAQSDKEPDPA 356 ++++++ + D PDPA Sbjct: 351 RATAAVDDTLDRLIEGSGKDRRLKPDLWPDPA 382 >gi|119718673|ref|YP_925638.1| dehydrogenase, E1 component [Nocardioides sp. JS614] gi|119539334|gb|ABL83951.1| dehydrogenase, E1 component [Nocardioides sp. JS614] Length = 726 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 100/286 (34%), Positives = 145/286 (50%), Gaps = 24/286 (8%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y ++ IR FE+ L G++ G H IGQE VG ++LT D + ++R H Sbjct: 35 YAQLVWIRTFEQYVLDLAASGLIHGPAHSSIGQEGGAVGSVLALTSADSVNGSHRGHHQF 94 Query: 116 LAC--------GVDAS------------KIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 LA G+D + +AE+ G G S G+GGSMH+ + G G Sbjct: 95 LAKALHHVEPKGMDPLEAPSEQVRDVLLRTLAEICGLDRGWSHGRGGSMHLQWKEAGAMG 154 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + IVG V G A++++ +D + V FGDGA N G E+ N+A W+L V + I Sbjct: 155 TNAIVGGGVPQAAGFAWSHRQAGTDAVSVTYFGDGAVNIGSTLETMNLAGAWSLPVCFFI 214 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENN+YA+ TSV A+A+ S RG+ FN+ +VDGMD AV M +AV + R +G Sbjct: 215 ENNRYAVSTSVDEATAEPRLSARGLGFNLASWKVDGMDPLAVHLAMSEAVEHMRRGRGAT 274 Query: 276 IIEMLTYRY---RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 ++E+ TYR+ G YR +EE R+ DP+ Q L Sbjct: 275 VVEVDTYRFFHQNGGFAGSAFGYRDKEEERAWRAR-DPLTQTAAHL 319 >gi|330467607|ref|YP_004405350.1| acetoin dehydrogenase subunit alpha [Verrucosispora maris AB-18-032] gi|328810578|gb|AEB44750.1| acetoin dehydrogenase alpha subunit [Verrucosispora maris AB-18-032] Length = 311 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 96/250 (38%), Positives = 134/250 (53%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M IRRFEE+ L G + G HLC GQEA+ VG +L +GD + YR HG Sbjct: 7 YRAMARIRRFEERLTALKDAGEIPGSIHLCNGQEAIPVGAARTLRDGDYVTATYRGHGWA 66 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA GVD + + AE+ GR ++ G+ S ++ F G + IVGA V + TG A + Sbjct: 67 LARGVDMTGLFAEMMGRDSAVNGGRAASPYLSDPGRWFVGENSIVGAGVPIATGAALTAQ 126 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 S + VV GDGA NQG V+E+ N+AA+ +L ++ V+ENN Y+ + + Sbjct: 127 RTGSGAVSVVSIGDGAMNQGNVHEALNMAAVLDLPLVLVVENNVYSEMSRIEDMVRVRQL 186 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 ++R + IPG VDG D AV + +AV R GP I+E +T R GH D +Y Sbjct: 187 AERAAGYGIPGRVVDGNDPDAVADAVGEAVTRAREGSGPSIVEAMTERLVGHYSGDVQHY 246 Query: 296 RTREEINEMR 305 R E+ R Sbjct: 247 RPAGEVAAAR 256 >gi|33861785|ref|NP_893346.1| dehydrogenase, E1 component [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640153|emb|CAE19688.1| Dehydrogenase, E1 component [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 324 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 95/263 (36%), Positives = 142/263 (53%), Gaps = 5/263 (1%) Query: 52 ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 + +++ L IR EE L + G H +G+EA+ G+ D + + +R Sbjct: 31 HFNQFKIALHIRAIEEAIVSLAKDNKLRGPIHSYVGEEAIATGVLSHAKPIDAVTSTHRG 90 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 HGH +A G + S ++ EL G++ G + GKGGSMH+ +G +GIVG V + GIA Sbjct: 91 HGHYIAKGGNISMLIDELHGKESGCNGGKGGSMHVADLSINHFGANGIVGGGVPIACGIA 150 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 ANK + D I FGDGA+NQG V ESFN+A +L ++++ ENNQ+A T +S S Sbjct: 151 LANKLDKKDSIVFCFFGDGASNQGVVLESFNLAGFLSLPIVFICENNQFAQSTKLSDISL 210 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 T+ +K+ F I ++VDG++I V + AV Y R P +I+ TYR+ H +S+ Sbjct: 211 -TSVAKKSQGFGIKSIEVDGLNISEVYSKTSDAVNYTRNEIKPYLIQANTYRFHRHFVSE 269 Query: 292 ---PANYRTREEINEMRSNHDPI 311 P +Y E S DPI Sbjct: 270 KPKPIDYLDENFHKEFLSK-DPI 291 >gi|119897830|ref|YP_933043.1| putative acetion dehydrogenase subunit alpha [Azoarcus sp. BH72] gi|119670243|emb|CAL94156.1| putative acetion dehydrogenase, alpha subunit [Azoarcus sp. BH72] Length = 320 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 98/261 (37%), Positives = 141/261 (54%), Gaps = 2/261 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLLIR +EEKA L G C +GQEA VG+ +L + ++T +R GH+LA Sbjct: 17 MLLIRAYEEKAAALQAESGTPGTC-TAVGQEAAAVGVVAALGADELILTNHRSAGHLLAR 75 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G D +++AE+ GR+GG KGK GS+H+ + + G IVG +++L TG+A A K R Sbjct: 76 GADPGRLLAEVMGRRGGYCKGKSGSLHVSARELGVVLTSTIVGGELALATGVALAQKQLR 135 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 V FGDGAA +G+ +ES N+AALW L V+YV ENN++ + Sbjct: 136 RPGAVVCFFGDGAACEGRFHESLNLAALWGLPVLYVCENNEWQAFVHRRETMLAEGIAGW 195 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 ++ I VDG D+ V+A A+ R P ++E TYR RGH D Y Sbjct: 196 AGNYGIDHATVDGNDVEQVRAVAAAALESVRGRGRPFLLEARTYRLRGHFEPDDQAYVDT 255 Query: 299 EEINEMRSNHDPIEQVRKRLL 319 +E+ R+ DP+ ++ RLL Sbjct: 256 DELAAWRAR-DPLPRMEARLL 275 >gi|295696199|ref|YP_003589437.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Bacillus tusciae DSM 2912] gi|295411801|gb|ADG06293.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Bacillus tusciae DSM 2912] Length = 363 Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 101/319 (31%), Positives = 160/319 (50%), Gaps = 12/319 (3%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 EV+ KEQ + YR M+ IR F+ + +L G +G + L GQEA VG +L G Sbjct: 26 EVNIPPKEQCVEMYRWMVKIRAFDRRCVRLQRQGRIGTYAPL-EGQEAAQVGSAFALDPG 84 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D M YR+HG + GV +I+ GR G + + +F +G Sbjct: 85 DMMFPTYRDHGAMAVHGVPLERILLYWNGRVEGTDYPQ--DVQVFPPAVP-------IGT 135 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A A +YR I + FGDGA ++G +E N AA++ V+ +NNQYA+ Sbjct: 136 QIPHAVGYAMARQYRGDTGIALGYFGDGATSEGDFHEGLNFAAVFRAPVVLFCQNNQYAI 195 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 SR +A +++ ++ I G++VDG D+ AV A AV R +GP +IE TY Sbjct: 196 SVPFSRQTATQTVAEKAAAYGIEGIRVDGNDLLAVYAATRHAVEKARRGEGPTLIEAYTY 255 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R+ H+ +D YR EE+ EM + DPI + R L +W + + + V + I Sbjct: 256 RFHSHTTADDHTRYRAAEEV-EMWKSRDPIRRFRAFLEARRWWDDQSERALADEVEERIE 314 Query: 342 NSVEFAQSDKEPDPAELYS 360 +V+ + + +PA++++ Sbjct: 315 QAVQTMEQWEAVNPADMFN 333 >gi|154245517|ref|YP_001416475.1| dehydrogenase E1 component [Xanthobacter autotrophicus Py2] gi|154159602|gb|ABS66818.1| dehydrogenase E1 component [Xanthobacter autotrophicus Py2] Length = 728 Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 96/246 (39%), Positives = 127/246 (51%), Gaps = 20/246 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M LIR FEEK +L G G+V G H IGQE G + + DQ+ ++R H LA Sbjct: 38 MALIRAFEEKVLELAGQGLVHGPAHSAIGQEGGATGSAVMMRTSDQVNGSHRAHHQFLAK 97 Query: 119 GVD--------------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 + + K MAE+ G G KG+GGSMH+ + G G + Sbjct: 98 SLAYVAPDGLSPTAAISGDVRDLSKKTMAEILGLAQGFCKGRGGSMHLRWGEAGNLGTNA 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V L G AFA+K + FGDGA N G V E+ N+AA W L + + IENN Sbjct: 158 IVGGGVPLAAGAAFAHKRAGTGDAVFTYFGDGATNIGSVLETMNLAAAWKLPLCFFIENN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T V A+A+T S RG+ F IP +VDGMD AV +A+ R+ GP +IE Sbjct: 218 RYAVSTHVEEATAETRLSARGLGFAIPSWKVDGMDPLAVALASAEALEVMRSGGGPTVIE 277 Query: 279 MLTYRY 284 YR+ Sbjct: 278 ADVYRF 283 >gi|255533705|ref|YP_003094077.1| dehydrogenase E1 component [Pedobacter heparinus DSM 2366] gi|255346689|gb|ACU06015.1| dehydrogenase E1 component [Pedobacter heparinus DSM 2366] Length = 659 Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 93/301 (30%), Positives = 162/301 (53%), Gaps = 2/301 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ Y +L R EEK L G +G + IGQEA+ VG M++ + ++ +R Sbjct: 14 LNFYLQLLYPRMVEEKMLILLRQGRIGKWFS-GIGQEAIAVGSTMAMKASEYILPMHRNL 72 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G + V +K+MA+ G+ G +KG+ S H + ++ G +G Q++L GIA Sbjct: 73 GVFTSRNVSLTKLMAQWQGKATGFTKGRDRSFHFGTQEHKIIGMISHLGPQMALADGIAL 132 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+ ++ +V G+GA ++G +E+ N+AA+W+L VI++IENN Y + T V+ Sbjct: 133 ADVLTGKQQVTLVFTGEGATSEGDFHEAVNVAAVWDLPVIFLIENNGYGLSTPVNEQFRC 192 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 N + + + I G +VDG +I V +D+ R + P++IE LT+R RGH + Sbjct: 193 KNLIDKAIGYGIEGFKVDGNNILEVYDLIDRVACRMRENPKPVLIECLTFRMRGHEEASG 252 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 Y +E ++E DP++ + LL K + ++EI+ +++ I+N VE A ++ + Sbjct: 253 TKYVPQELLDEWEKK-DPVKNFEQYLLDQKILNPDSIEEIKASLKTEIDNEVENAFNEAD 311 Query: 353 P 353 P Sbjct: 312 P 312 >gi|167644555|ref|YP_001682218.1| dehydrogenase E1 component [Caulobacter sp. K31] gi|167346985|gb|ABZ69720.1| dehydrogenase E1 component [Caulobacter sp. K31] Length = 680 Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 101/306 (33%), Positives = 154/306 (50%), Gaps = 3/306 (0%) Query: 59 MLLIRRFEEKAGQLY--GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 + +R FEE+A +L V G HLC GQE V V +L + DQ++ YR HG L Sbjct: 26 ICFVRAFEEEALRLTQANPPRVAGSMHLCAGQEVVPVAAMEALGDEDQVVCTYRGHGWAL 85 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 A G+D +MAE+ R G++ G+ GS +M + F G + IVGA ++ G+A AN+ Sbjct: 86 AAGLDPEAVMAEICQRSTGLNGGRAGSAYMMAPHTRFIGENSIVGAGTTIACGVAMANRL 145 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R D + +V GDGA NQG V+E+ AA+ L VI+V+ENN ++ T S + Sbjct: 146 RGRDNVVMVTIGDGAMNQGSVHEAMAFAAVRKLPVIFVVENNGWSELTPTSDMFHAERLA 205 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 RG ++ IP + G D V+ + A A+ RA GP +IE R GH D +YR Sbjct: 206 VRGKAYGIPSATISGTDPVVVRDSFAMAAAHARAGNGPSLIECTVPRLWGHYNRDIEHYR 265 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 ++ + E + DP+ + RL + ++ ++ I + V + P PA Sbjct: 266 SKADRAEA-TARDPLVLLAARLQQDGVMTDDEVAAIRKSQEDAARALVLRVMASPAPSPA 324 Query: 357 ELYSDI 362 + I Sbjct: 325 DALQPI 330 >gi|77405749|ref|ZP_00782835.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae H36B] gi|77175671|gb|EAO78454.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae H36B] Length = 222 Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 81/222 (36%), Positives = 131/222 (59%), Gaps = 2/222 (0%) Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 MH+ + + G YG +GIVG +L G A +Y +D I + GD A N+G +ES N+ Sbjct: 1 MHLANLEKGNYGTNGIVGGGYALAVGAALTQQYEGTDNIVIAFSGDSATNEGSFHESVNL 60 Query: 204 AALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMD 262 AA+WNL VI+ I NN+Y + T ++ ++ + R ++ IPG V DG D+ AV M Sbjct: 61 AAVWNLPVIFFIINNRYGISTDITYSTKIPHLYMRADAYGIPGHYVEDGNDLMAVYEKMH 120 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 + + Y R+ GP I+E+ +YR+ GHS +D YRT+EE++ ++ DP+++ R L+ N+ Sbjct: 121 EVINYVRSGNGPAIVEVESYRWFGHSTADAGVYRTKEEVDSWKAK-DPVKRYRAYLIENE 179 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 A+E +L IE V K + V+FA+ PD + + D+ + Sbjct: 180 IATEEELAAIEAQVIKEVEEGVKFAEESPFPDMSVAFEDVFV 221 >gi|77164929|ref|YP_343454.1| pyruvate dehydrogenase (lipoamide) [Nitrosococcus oceani ATCC 19707] gi|254434042|ref|ZP_05047550.1| pyruvate dehydrogenase E1 component, alpha subunit [Nitrosococcus oceani AFC27] gi|76883243|gb|ABA57924.1| Pyruvate dehydrogenase (lipoamide) [Nitrosococcus oceani ATCC 19707] gi|207090375|gb|EDZ67646.1| pyruvate dehydrogenase E1 component, alpha subunit [Nitrosococcus oceani AFC27] Length = 358 Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 161/314 (51%), Gaps = 18/314 (5%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + YR M L R F++KA L G +G + +GQEA+ V + ++ D ++T YRE+ Sbjct: 36 IPLYRTMTLTRLFDKKAVSLQRTGQLGTYAS-SLGQEAISVAIGHVMSADDVLLTTYREY 94 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKG--GSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 G L GV M EL GG +G H F V +QV G+ Sbjct: 95 GAQLQRGV----TMTELLLYWGGDERGMAYQDCRHDFPISVP-------VASQVPHAVGV 143 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A+A K RR ++ V GDGA ++G YE+ N A LW L V++VI NN +A+ ++ + Sbjct: 144 AYAMKLRREPRVAVCVLGDGATSKGDFYEAMNAAGLWRLPVVFVINNNGWAISVPLAAQT 203 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 +++ ++ IPG QVDG D+ A++ M+ A+ R +GP +IE LTYR H+ + Sbjct: 204 RTQTLAQKAIAAGIPGEQVDGNDVIALRTRMENAIEKARRGEGPCLIEALTYRLCDHTTA 263 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D A+ YR + E+ E R DPI+++R L E + ++ + + + +V+ Sbjct: 264 DDASRYREQAEV-EARWRLDPIQRLRTYLTQAGAWDEEQEQSLQTELTQQVEEAVQ-KYL 321 Query: 350 DKEPDPAE-LYSDI 362 D P P E ++ D+ Sbjct: 322 DTPPQPPESMFDDL 335 >gi|149376244|ref|ZP_01894008.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Marinobacter algicola DG893] gi|149359441|gb|EDM47901.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Marinobacter algicola DG893] Length = 394 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 100/328 (30%), Positives = 164/328 (50%), Gaps = 7/328 (2%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 +G + E +K++ L YR M+ R +E+ G + F C G+EA ++G Sbjct: 34 LYKGAKAPELDKDKALRIYRAMVTTRILDERMLAAQRQGRLS-FYMQCTGEEAAVIGSTA 92 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +L + D ++ YRE G + G + M +L G + KG+ +H S K + Sbjct: 93 ALDDADMIMAQYREQGALTYRGFSIDEFMNQLFGNELDYGKGRQMPVHYGSRKLNYMTIS 152 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + Q+ TG A+ K + FG+GAA++G + + N+AA+ + VI++ N Sbjct: 153 SPLATQIPQATGYAYGQKLAGEGHCTITYFGEGAASEGDFHAALNMAAVHRVPVIFLCRN 212 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N YA+ T + A + R + + ++VDG DI AV +A H P++I Sbjct: 213 NGYAISTPAAEQFAADGVAPRAYGYKMDVIRVDGNDILAVHEATKEARKLAVEHNRPVLI 272 Query: 278 EMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E +TYR HS S DP+ YR+++E R DPI ++R L KW SE D K+++ N+ Sbjct: 273 ETMTYRLAAHSSSDDPSGYRSKDEEAVWREK-DPILRMRLWLERKKWWSEDDEKQLQENM 331 Query: 337 RKIINNSVEFAQSDKEPDPA--ELYSDI 362 R+ + +++ AQ K P PA L SD+ Sbjct: 332 RREVLETMKRAQ--KRPPPALDTLVSDV 357 >gi|167644550|ref|YP_001682213.1| dehydrogenase E1 component [Caulobacter sp. K31] gi|167346980|gb|ABZ69715.1| dehydrogenase E1 component [Caulobacter sp. K31] Length = 714 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 105/305 (34%), Positives = 154/305 (50%), Gaps = 24/305 (7%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+LIR FEEK +L G G+V G H IGQE VG +++ DQ+ ++R H LA Sbjct: 25 MVLIRAFEEKVLELAGHGLVHGPAHSAIGQEGGAVGSVLAMRGSDQINGSHRAHHQFLAK 84 Query: 119 GVD--------------------ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 + A + ++E+ G G KG+GGSMH+ ++G G + Sbjct: 85 ALHYVAPQGLRSSDPFDDDVRTIADRALSEILGLARGYCKGRGGSMHLRWAESGNLGTNA 144 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG V G A+A+K + + FGDGA N G V E+ N+AA W L + + IENN Sbjct: 145 IVGGGVPAAAGAAWAHKRAGAGDVAFTYFGDGAVNIGSVLETMNLAAAWKLPLCFFIENN 204 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YA+ T+V +A+ S RG++F IP +VDGMD AV AV RA +GP IIE Sbjct: 205 RYAVSTTVEEVTAEPRLSSRGLAFGIPAWKVDGMDPLAVYLATTAAVEKMRAGEGPTIIE 264 Query: 279 MLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 YRY + P + YR++ E E DPI+++ + + E + + Sbjct: 265 ADVYRYFHQNGPLPGSAFGYRSKRE-EEAWRKRDPIDRIAAEMASRQLIGEEQVALLRAQ 323 Query: 336 VRKII 340 R ++ Sbjct: 324 ARTLM 328 >gi|292492199|ref|YP_003527638.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Nitrosococcus halophilus Nc4] gi|291580794|gb|ADE15251.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Nitrosococcus halophilus Nc4] Length = 367 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 97/322 (30%), Positives = 168/322 (52%), Gaps = 14/322 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + +KEQ L +R MLL RRF+E+ L G +G F + GQEA +G +L D Sbjct: 29 MPDLSKEQLLRFHRGMLLARRFDERLLLLQRQGHIGTFAPVK-GQEAAQIGAVANLKAED 87 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M+ A+RE IL G S ++ G G GK + + V +Q Sbjct: 88 WMLPAFREIAAILWRGTLPSALIIFNAGYNEG---GK------IPQQQRDFPNAVPVASQ 138 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G GIA+ KYR+ ++ + FGDGA ++G +E+ N AA++ + +++ +NN +A+ Sbjct: 139 LPHGVGIAYGIKYRKKQEVVLTFFGDGATSEGDFHEALNFAAVFEVPAVFICQNNHWAIS 198 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + + +++ +++ IPG+QVDG D+ AV A +AV R+ GP +IE +TYR Sbjct: 199 VPREKQTKSKTLAQKALAYGIPGIQVDGNDVLAVYAATQEAVERARSGGGPTLIECVTYR 258 Query: 284 YRGH-SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H ++ DP YR EE+ ++ DP+ + +K L SE D+ ++E +++ ++ Sbjct: 259 LTMHTTVDDPTKYRQEEEV-KIWEKRDPLPRFQKFLQEAGHLSEKDIDDLEKEIKEHLDT 317 Query: 343 SVEFAQSDKEP--DPAELYSDI 362 AQ E +P +++ + Sbjct: 318 EWSEAQQQMEKMGNPLDMFEHV 339 >gi|239835364|ref|YP_002956036.1| thiamine pyrophosphate-dependent dehydrogenases E1 component alpha subunit [Desulfovibrio magneticus RS-1] gi|239794455|dbj|BAH73446.1| thiamine pyrophosphate-dependent dehydrogenases E1 component alpha subunit [Desulfovibrio magneticus RS-1] Length = 337 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 111/320 (34%), Positives = 164/320 (51%), Gaps = 5/320 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 E L+ YR ML IRR +E+ LY + HLCIGQEA+ G+ ++L D + + Sbjct: 17 KSETMLALYRSMLRIRRVQERIESLYLQDAMKTPVHLCIGQEAIAAGICLALEPDDSIQS 76 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH LA G D ++AEL + G S G GGSMH+ G G IVG + +G Sbjct: 77 NHRGHGHYLAKGGDLKAMIAELHCKATGCSGGFGGSMHLVDVAAGHLGSSSIVGGGIPIG 136 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TGI A + RR+ ++ VV FGDGAA++G +YES N A L L+VI+V+E+N++A+ + Sbjct: 137 TGIGLAMRMRRTSQVSVVFFGDGAADEGVLYESLNFAMLKRLSVIFVLEDNRWAVCSPRD 196 Query: 228 RASAQTNFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 N RG + + ++DG D V T AVA R+ GP ++ TYR G Sbjct: 197 SRQTGDNVFLRGADPDRLFTARLDGNDAEIVHETARAAVARGRSGAGPSLLVCDTYRIMG 256 Query: 287 HS---MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 H+ +P+ YR EI+ S+ P+ R +L E +E + I + Sbjct: 257 HAGCKAQEPSGYRDACEIDAW-SDKCPVALYRAKLASRGILDEPTEAAMEATIAAEITEA 315 Query: 344 VEFAQSDKEPDPAELYSDIL 363 +FA P +L+ + Sbjct: 316 FDFAAQSPLPHDGDLHKHLF 335 >gi|302038410|ref|YP_003798732.1| putative 2-oxoisovalerate dehydrogenase subunit alpha [Candidatus Nitrospira defluvii] gi|300606474|emb|CBK42807.1| putative 2-oxoisovalerate dehydrogenase, alpha subunit (TPP-binding module) [Candidatus Nitrospira defluvii] Length = 333 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 97/313 (30%), Positives = 152/313 (48%), Gaps = 1/313 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E + L Y + L R E++ LY G + G + G EA+ VG +L D Sbjct: 8 NEIKRGDLLDMYYYLRLTRSLEDRISALYRQGRIVGGVYTSHGMEAIAVGYASALRPDDV 67 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + +R+ G L G +I+A+ G+QGG +KGK G++HM K G G + + Sbjct: 68 IAPFHRDMGAFLIRGFSPGEIIAQYLGKQGGPTKGKDGNVHMGDLKRGMIGFVSHLADNM 127 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + G A A K R ++ GDG ++G +E+ N AA+ L V++ NNQYA T Sbjct: 128 PVAAGAALAFKIRGESRVAFAGTGDGGTSRGDFHEAMNFAAVRRLPVVFFCTNNQYAYST 187 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 V A T+ +R ++ +PG VDG D+ AV +A+A RA +GP +E T R Sbjct: 188 PVRYQMAITDVVERANAYGMPGEIVDGNDVAAVYLASRQAIAKARAGEGPTFLEFKTMRM 247 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS D A Y RE + E ++ DPI + + + + E+ +K ++ + Sbjct: 248 HGHSEHDAAKYVPRELLEEWKTK-DPILRAERLVTQLGYGDASYFHEVGERAKKEVDAGM 306 Query: 345 EFAQSDKEPDPAE 357 EFA+ P+ E Sbjct: 307 EFAEQSPLPEGRE 319 >gi|313902237|ref|ZP_07835644.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermaerobacter subterraneus DSM 13965] gi|313467517|gb|EFR63024.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermaerobacter subterraneus DSM 13965] Length = 417 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 87/282 (30%), Positives = 145/282 (51%), Gaps = 11/282 (3%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L G + E+ + YR M+L R F+E+ L G +G + L GQEA VG + Sbjct: 24 LVGEPAPDLTDEKLVEFYRWMVLARTFDERCLNLQRQGRMGTYAPLA-GQEAAQVGSAFA 82 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L D + +YREH + G+ K++ GR+ G + + + Sbjct: 83 LQPEDWVFPSYREHAVTMIHGLPMEKVLLYWMGREEG---------NQIPPEVNVFTVAV 133 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + Q+ G A+A + R + +V FGDGA ++G +E N A ++ V++ +NN Sbjct: 134 PIATQIPHAVGAAWAARIRGDRRAFIVYFGDGATSEGDFHEGCNFAGVFKAPVVFFCQNN 193 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 Q+A+ + R +A +++ V++ PG++VDG D+ AV +A+ RA +GP +IE Sbjct: 194 QFAISVPLHRQTASETIAQKAVAYGFPGVRVDGNDVLAVYKVTKEALDRARAGEGPTLIE 253 Query: 279 MLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 LTYRY H+ + DP YR R+E+ E R DP+ ++R+ L+ Sbjct: 254 ALTYRYGPHTTADDPTRYRGRDEVEEWRQRRDPLNRMRRFLM 295 >gi|307289199|ref|ZP_07569155.1| dehydrogenase E1 component [Enterococcus faecalis TX0109] gi|306499908|gb|EFM69269.1| dehydrogenase E1 component [Enterococcus faecalis TX0109] gi|315164108|gb|EFU08125.1| dehydrogenase E1 component [Enterococcus faecalis TX1302] Length = 330 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 97/327 (29%), Positives = 168/327 (51%), Gaps = 5/327 (1%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ + S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ Sbjct: 3 MKALKKSGLSKEELIQAYREVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMA 61 Query: 99 L-TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGG 156 + D + YR+ L G+ + I+ G++ S G+ H S ++ Sbjct: 62 FDPQKDYFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSF 121 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 V Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+E Sbjct: 122 SSTVSTQMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVE 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN+YA+ + A + R ++ G+ VDG D AV +AV R KGP + Sbjct: 182 NNEYAISVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTAVYLAFKEAVKAARGKKGPKL 241 Query: 277 IEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 IE++ R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ Sbjct: 242 IELMVSRLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEE 300 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 +R IN + + A++ +P P + ++ Sbjct: 301 IRAEINQATDEAEAMPDPVPTSILEEV 327 >gi|297201044|ref|ZP_06918441.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sviceus ATCC 29083] gi|197712172|gb|EDY56206.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sviceus ATCC 29083] Length = 408 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 154/312 (49%), Gaps = 13/312 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ E+ YR M+L RRF+ +A L G +G + L +GQEA +G +L + D Sbjct: 73 VADITPEELRGLYRDMVLTRRFDAEATSLQRQGELGLWASL-LGQEAAQIGSGRALRDDD 131 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YREHG GVD + ++ G G G + H+++ ++G+Q Sbjct: 132 YVFPTYREHGVAWCRGVDPTNLLGMFRGVNNGGWDPNGNNFHLYTI---------VIGSQ 182 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A +D + FGDGA++QG V ESF +A++N V++ +NNQ+A+ Sbjct: 183 TLHATGYAMGVAKDGADSAVIAYFGDGASSQGDVAESFTFSAVYNAPVVFFCQNNQWAIS 242 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + + + +R F PG++VDG D+ A A A+ RA +GP ++E TYR Sbjct: 243 EPTEKQT-RVPLYQRAQGFGFPGVRVDGNDVLASLAVTKWALERARAGEGPTLVEAYTYR 301 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ S DP+ YR EE E DPI ++R+ L A EG E+E + Sbjct: 302 MGAHTTSDDPSKYRADEE-REAWEAKDPILRLRRHLEAANHADEGFFAELETESEALGRR 360 Query: 343 SVEFAQSDKEPD 354 E ++ +PD Sbjct: 361 VREAVRAMPDPD 372 >gi|269929377|ref|YP_003321698.1| 3-methyl-2-oxobutanoate dehydrogenase (2- methylpropanoyl-transferring) [Sphaerobacter thermophilus DSM 20745] gi|269788734|gb|ACZ40876.1| 3-methyl-2-oxobutanoate dehydrogenase (2- methylpropanoyl-transferring) [Sphaerobacter thermophilus DSM 20745] Length = 340 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 102/306 (33%), Positives = 145/306 (47%), Gaps = 5/306 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 Y M+L R +E+ L G F C G EA VG +L G D ++ YR+ Sbjct: 30 YEYMVLARSLDERMWLLNRAGQ-APFVISCQGHEAAQVGAAFALQPGKDVLVPYYRDLAM 88 Query: 115 ILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +L G+ +M L R + S G+ H S K+ G V QV TGIA A Sbjct: 89 VLYFGLTPRDLMLSLLARKEDPTSAGRQMPGHYGSRKHNIITGSSPVATQVLHATGIALA 148 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 KYRR D + C G+G +QG +E+ N A++ L V++ +ENN YA+ + A Sbjct: 149 AKYRREDTVAWTCVGEGGTSQGDFHEALNFASIHRLPVVFFVENNGYAISVPQRKQMAIE 208 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM-SDP 292 N + R + +PG+ VDG D AV +AV RA GP +IE R HS D Sbjct: 209 NVADRAAGYGMPGVTVDGGDPVAVYTVAKEAVDRARAGGGPTLIEAKVQRLTAHSSDDDD 268 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR EE+ R+ DPI + R L+ +E I ++ I+++ +FA+ Sbjct: 269 RTYRDPEELKAERAK-DPIVRFRTALMEQGVLTEEQDAAIRARIKAQIDDATDFAEQAPY 327 Query: 353 PDPAEL 358 PDPAEL Sbjct: 328 PDPAEL 333 >gi|315147356|gb|EFT91372.1| dehydrogenase E1 component [Enterococcus faecalis TX4244] Length = 330 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 165/321 (51%), Gaps = 5/321 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGD 103 S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ + D Sbjct: 9 SGLSKEELIQAYRQVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMAFDPQKD 67 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ L G+ + I+ + G++ S G+ H S ++ V Sbjct: 68 YFLPYYRDMTACLVWGMTSKDILMDSFGKEADPSSHGRQMPNHYGSKEHNIVSFSSTVST 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+ENN+YA+ Sbjct: 128 QMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVENNEYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A + R ++ G+ VDG D V +AV R KGP +IE++ Sbjct: 188 SVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKLIELMVS 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ +R IN Sbjct: 248 RLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEEIRAEIN 306 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + + A++ +P P + ++ Sbjct: 307 QATDEAEAMPDPVPTSILEEV 327 >gi|56420562|ref|YP_147880.1| pyruvate dehydrogenase E1 (lipoamide) subunit alpha [Geobacillus kaustophilus HTA426] gi|56380404|dbj|BAD76312.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Geobacillus kaustophilus HTA426] Length = 356 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 92/319 (28%), Positives = 159/319 (49%), Gaps = 15/319 (4%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + KE ++ YR ++ R + K L G +G + GQEA VG ++L +GD M Sbjct: 25 QITKELTMTMYRHLIRTRMVDRKCISLQRQGRIGTYVPYE-GQEACQVGSALALNDGDWM 83 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 YR+HG ++ G ++ + GR G +G + S + Q+ Sbjct: 84 FPTYRDHGAMMTFGRSLTQTLLYWKGRTEGCVPPEGKKIVPPSVP---------IATQLP 134 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A A K++ + +V FGDGA ++G +E N A+++N V++ +NNQYA+ Sbjct: 135 HAAGAACAEKWKGTKNAVIVYFGDGATSEGDFHEGLNFASVFNAPVVFFNQNNQYAISVP 194 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 ++R +++ ++++IPG+++DG D+ AV +A+ R GP +IE +T+RY Sbjct: 195 ITRQMKTKTIAQKALAYDIPGLRIDGNDVFAVYFKTTEALERARNGGGPTLIEAVTWRYG 254 Query: 286 GHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 H+ S DP+ YR +EE + R DPI++V + + W E +++ V N + Sbjct: 255 AHTTSDDPSRYRDQEESQKRRETTDPIKRVERLMQREGWWDEKWANQVQEEV----NAEI 310 Query: 345 EFAQSDKEPDPAELYSDIL 363 E A + E P SD+ Sbjct: 311 EQAVVEMESYPKANVSDMF 329 >gi|52080943|ref|YP_079734.1| branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase subunit alpha) [Bacillus licheniformis ATCC 14580] gi|52786320|ref|YP_092149.1| BkdAA [Bacillus licheniformis ATCC 14580] gi|52004154|gb|AAU24096.1| branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit) [Bacillus licheniformis ATCC 14580] gi|52348822|gb|AAU41456.1| BkdAA [Bacillus licheniformis ATCC 14580] Length = 330 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 154/314 (49%), Gaps = 5/314 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 EQ + Y+ MLL R+ +E+ L G + F C GQEA VG +L E D + Sbjct: 11 LTDEQAIDMYKTMLLARKLDERMWLLNRSGKIP-FVISCQGQEAAQVGAAFALDRENDYV 69 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR+ G +LA G+ A +M + + S GK H KN G V QV Sbjct: 70 LPYYRDMGVVLAFGMTAKDLMLSAFAKAEDPNSGGKQMPSHFGQKKNRIVTGSSPVTTQV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G+A A + + D V FG+G++NQG +E N AA+ L VI++ ENN+YA+ Sbjct: 130 PHAVGVALAGRLDKKDIATFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAISV 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + A N S R V + +PG+ VDG D V + +A +GP +IE ++YR Sbjct: 190 PYEKQVACENISDRAVGYGMPGVTVDGNDPLEVYKAVKEARERAGRGEGPTLIETISYRL 249 Query: 285 RGHSM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D +YR REE+ E + N DP+ + + L + K+I + KI+N + Sbjct: 250 TPHSSDDDDRSYREREEVAEAKKN-DPLNKFAQYLKEAGLLDDQSEKQISDEITKIVNEA 308 Query: 344 VEFAQSDKEPDPAE 357 ++A+ DP + Sbjct: 309 TDYAEHAPYADPED 322 >gi|163848665|ref|YP_001636709.1| pyruvate dehydrogenase [Chloroflexus aurantiacus J-10-fl] gi|222526601|ref|YP_002571072.1| pyruvate dehydrogenase [Chloroflexus sp. Y-400-fl] gi|163669954|gb|ABY36320.1| Pyruvate dehydrogenase (acetyl-transferring) [Chloroflexus aurantiacus J-10-fl] gi|222450480|gb|ACM54746.1| Pyruvate dehydrogenase (acetyl-transferring) [Chloroflexus sp. Y-400-fl] Length = 321 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 97/316 (30%), Positives = 161/316 (50%), Gaps = 2/316 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E N E A+ M L R +++ L+ + G IG EA+ V +SL D Sbjct: 1 MDEINDELLQQAHYWMRLTRALDDRGTFLHKQSKIVGGYFSQIGHEALSVAAALSLGPRD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH-MFSTKNGFYGGHGIVGA 162 + +R+ G L G+ +I+A+ GR+ G+++G+ ++H M G G + A Sbjct: 61 IIAPMHRDLGAYLVRGLTPKRILAQWLGRETGVTRGRDANLHGMGDLSLGIIGFISHLPA 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + TG+A A K + ++ + FGDG+A+QG +E+ N A+++ L ++ + ENNQYA Sbjct: 121 STGVITGVAHAIKLKGEPRVAMCFFGDGSASQGLAHEAMNWASVFKLPMVIICENNQYAY 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T +SR A T+ ++R + +PG+ VDG D AV +AV RA GP IE T Sbjct: 181 STPLSRQMAITDIAQRAAGYAMPGVIVDGNDFAAVYRATKEAVERARAGGGPTFIECKTM 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R RGH++ D Y +E + E + DPI ++ + L + L + + ++ Sbjct: 241 RMRGHAIHDNMAYVPKELLAEWEAR-DPIARIEEVLRSRGLLDDAKLAALLARIEAELDE 299 Query: 343 SVEFAQSDKEPDPAEL 358 + FA++ PDPA L Sbjct: 300 AQAFAEASPYPDPATL 315 >gi|313885554|ref|ZP_07819304.1| 2-oxoisovalerate dehydrogenase subunit alpha [Eremococcus coleocola ACS-139-V-Col8] gi|312619284|gb|EFR30723.1| 2-oxoisovalerate dehydrogenase subunit alpha [Eremococcus coleocola ACS-139-V-Col8] Length = 327 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 96/327 (29%), Positives = 168/327 (51%), Gaps = 5/327 (1%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 +E S +KE+ + Y+ +L RR +E+ QL +G F G E V M M+ Sbjct: 1 MEKLAKSGLSKEEIIEVYKHVLRGRRLDERLWQLTRIGK-SSFNISGQGAELAQVAMAMA 59 Query: 99 L-TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGG 156 + D + YR+ L G+ + I+ G++ S G+ H S ++ Sbjct: 60 FDPKKDYFLPYYRDMTACLVWGMTSKDIVMGTFGKEADPSSHGRQMPNHYGSKEHNIVSH 119 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 V Q+ L TG+ +A + D + +V G+G+ANQG+V E+ N A + L VI+V+E Sbjct: 120 SSTVSTQIPLATGVGYAAQLEGKDYVALVTTGEGSANQGEVQEAMNFAGVKKLPVIFVVE 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN YA+ + A +FS RG ++ PG+ +DG D A +AV R +GP + Sbjct: 180 NNGYAISVANREQYANDDFSYRGPAYGFPGVTIDGNDFTATYLAFKEAVERARKGEGPTL 239 Query: 277 IEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 IE++ R HS D + YR++EEI+ ++ + DP+ K+L+ K+ S ++ +I+ + Sbjct: 240 IELVVSRLTSHSADDDQSIYRSKEEIDGLK-DKDPLNVFEKQLIAEKYLSREEMDQIDAD 298 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 ++ IN + + A+++ +P P +Y + Sbjct: 299 LKAEINQATDEAEAEPDPSPESVYEQV 325 >gi|261420229|ref|YP_003253911.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacillus sp. Y412MC61] gi|319767039|ref|YP_004132540.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacillus sp. Y412MC52] gi|261376686|gb|ACX79429.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. Y412MC61] gi|317111905|gb|ADU94397.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. Y412MC52] Length = 356 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 87/300 (29%), Positives = 152/300 (50%), Gaps = 11/300 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + KE ++ YR ++ R + K L G +G + GQEA VG ++L +GD M Sbjct: 25 QITKELTMTMYRHLIRTRMVDRKCVSLQRQGRIGTYVPYE-GQEACQVGSALALNDGDWM 83 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 YR+HG ++ G ++ + GR G +G + S + Q+ Sbjct: 84 FPTYRDHGAMMTFGRSLTQTLLYWKGRTEGCVPPEGKKIVPPSVP---------IATQLP 134 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A A K++ + +V FGDGA ++G +E N A+++N V++ +NNQYA+ Sbjct: 135 HAAGAACAEKWKGTKNAVIVYFGDGATSEGDFHEGLNFASVFNAPVVFFNQNNQYAISVP 194 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 ++R +++ ++++IPG+++DG D+ AV +A+ R GP +IE +T+RY Sbjct: 195 ITRQMKTKTIAQKALAYDIPGLRIDGNDVFAVYFKTTEALERARNGGGPTLIEAVTWRYG 254 Query: 286 GHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 H+ S DP+ YR +EE + R DPI++V + + W E +++ V I +V Sbjct: 255 AHTTSDDPSRYRDQEESKKRRETTDPIKRVERLMQREGWWDEEWANQVQAEVDAEIEQAV 314 >gi|23100332|ref|NP_693799.1| pyruvate dehydrogenase E1 alpha subunit [Oceanobacillus iheyensis HTE831] gi|22778564|dbj|BAC14833.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Oceanobacillus iheyensis HTE831] Length = 358 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 92/305 (30%), Positives = 161/305 (52%), Gaps = 12/305 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR ++ +R F++KA L G +G + GQE VG ++L E D M+ YR+H Sbjct: 39 YRQLICMRAFDQKAINLQRQGRIGTYPGFE-GQEGAQVGSALALDEDDWMLPTYRDHAAS 97 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G + I++ GR G +G ++ S + Q+ L GIA ANK Sbjct: 98 ITFG-KSYTILSSWNGRVEGNLPPEGKNILPPSVP---------IATQLPLAAGIAMANK 147 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y+ S + + FGDGA ++G +E N A+++ V++ +NNQYA+ T +SR Sbjct: 148 YKNSSQAVIAYFGDGATSEGDFHEGLNFASVFQAPVVFFNQNNQYAISTPISRQMNSETI 207 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 ++ V++ IPG+++DG DI A KA+ R +GP +IE +T+RY H+ + DP Sbjct: 208 VQKSVAYEIPGIRIDGNDIFAAYFETKKALERARNGEGPSLIEAVTWRYGAHTTADDPTK 267 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR ++E NE +DPI ++ + + E +++++ V++ I+ +V+ ++ D Sbjct: 268 YRNQKEENEKHRQNDPITRLELFMKAYGFWDEAVVEQLKEEVKEEIDGAVKDLETMPPAD 327 Query: 355 PAELY 359 ++Y Sbjct: 328 VNDIY 332 >gi|294633159|ref|ZP_06711718.1| acetoin dehydrogenase E1 component, alpha subunit [Streptomyces sp. e14] gi|292830940|gb|EFF89290.1| acetoin dehydrogenase E1 component, alpha subunit [Streptomyces sp. e14] Length = 309 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 90/258 (34%), Positives = 134/258 (51%), Gaps = 7/258 (2%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 +L+IR FE+ L+ G++ G H C+GQE V V + L D + + +R HGH LA Sbjct: 24 LLMIRHFEQAVLDLFARGLLNGTTHTCLGQEYVPVALGPLLAPDDFVFSNHRGHGHYLAR 83 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 D ++AE+TGR+G + G GGS H+F Y G+ G + + G A + Sbjct: 84 FDDPEGLLAEMTGREGAVCSGVGGSQHIFRDT---YLSTGVQGESLPVAVGTALWFQRTG 140 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 I V C GDG +G VYE+ N+AALW L ++ V+ENN A T +RA A + + R Sbjct: 141 RSGIAVACIGDGTWGEGAVYEALNLAALWRLPLLVVVENNGIAQTTPTARAMAG-DIAGR 199 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 +F I + V G D+ A++A + V R GP ++E T+R HS D + R+ Sbjct: 200 AAAFGIAHVPVTGSDVAAIRARLAPVVERTRTGGGPTVVEFATHRLGPHSKGD--DTRSA 257 Query: 299 EEINEMRSNHDPIEQVRK 316 E+ R HD + R+ Sbjct: 258 AEVAAER-EHDWHDAYRR 274 >gi|110639556|ref|YP_679766.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Cytophaga hutchinsonii ATCC 33406] gi|110282237|gb|ABG60423.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Cytophaga hutchinsonii ATCC 33406] Length = 659 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 86/313 (27%), Positives = 166/313 (53%), Gaps = 2/313 (0%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 FE + ++E + Y+ ++ R EEK L G + + IGQEAV VG+ +L Sbjct: 3 AFERNNIDQETLIRLYKELVKPRMIEEKMLFLLRQGKISKWFS-GIGQEAVSVGVACALE 61 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 + + ++ +R G + GV ++ + G+ G +KG+ S H S ++ G + Sbjct: 62 KEEYILPLHRNLGIFTSRGVPLHRLFCQFQGKPSGFTKGRDRSFHFGSKEHHIVGMISHL 121 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 G Q+++ GIA A K RS++ +V GDG ++G +E+ N+A++WNL +I+++ENN Y Sbjct: 122 GPQMAVADGIALAEKLSRSNRATLVFTGDGGTSEGDFHEALNLASVWNLPLIFLVENNGY 181 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 + T + +F ++G ++ I +DG +I V + + Y R P+++E + Sbjct: 182 GLSTPLEEQFKIKSFKEKGPAYAIETHTIDGNNILEVYSKIRVLADYVRRESRPVLVEAI 241 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 T+R RGH + Y E++ E + DP+E + LL+ + +++ I+ ++ I Sbjct: 242 TFRMRGHEEASGTKY-IPEQLFEAWAKKDPVENYERYLLNEAILTIQEIESIKQKIKDGI 300 Query: 341 NNSVEFAQSDKEP 353 + + ++ +++KEP Sbjct: 301 DEAWQYTENEKEP 313 >gi|229549919|ref|ZP_04438644.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis ATCC 29200] gi|229304992|gb|EEN70988.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis ATCC 29200] Length = 330 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 5/321 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGD 103 S+ +KE+ + AYR +L RR +E+ QL +G F G E V M M+ + D Sbjct: 9 SDLSKEELIQAYRQVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMAFDPQKD 67 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ L G+ + I+ G++ S G+ H S ++ V Sbjct: 68 YFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSFSSTVST 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+ENN+YA+ Sbjct: 128 QMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVENNEYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A + R ++ G+ VDG D V +AV R KGP +IE++ Sbjct: 188 SVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKLIELMVS 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D + YR++EEI EM+ N D ++ K+LL + + D+ +I+ +R IN Sbjct: 248 RLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTAEDIAKIDEEIRAEIN 306 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + + A++ +P P + ++ Sbjct: 307 QATDEAEAMPDPVPTSILEEV 327 >gi|257422519|ref|ZP_05599509.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis X98] gi|257164343|gb|EEU94303.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis X98] gi|315155660|gb|EFT99676.1| dehydrogenase E1 component [Enterococcus faecalis TX0043] Length = 330 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/327 (29%), Positives = 167/327 (51%), Gaps = 5/327 (1%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ + S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ Sbjct: 3 MKALKKSGLSKEELIQAYREVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMA 61 Query: 99 L-TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGG 156 + D + YR+ L G+ + I+ G++ S G+ H S ++ Sbjct: 62 FDPQKDYFLPYYRDMTACLVWGMTSKDILMGCFGKEADPSSHGRQMPNHYGSKEHNIVSF 121 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 V Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+E Sbjct: 122 SSTVSTQMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVE 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN+YA+ + A + R ++ G+ VDG D V +AV R KGP + Sbjct: 182 NNEYAISVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKL 241 Query: 277 IEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 IE++ R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ Sbjct: 242 IELMVSRLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEE 300 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 +R IN + + A++ +P P + ++ Sbjct: 301 IRAEINQATDEAEAMPDPVPTSILEEV 327 >gi|119946408|ref|YP_944088.1| pyruvate dehydrogenase complex, E1 beta subunit [Psychromonas ingrahamii 37] gi|119865012|gb|ABM04489.1| pyruvate dehydrogenase complex, E1 beta subunit [Psychromonas ingrahamii 37] Length = 727 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/327 (29%), Positives = 164/327 (50%), Gaps = 25/327 (7%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 ++++ ++ + + +IR FEE+ +L +G+V G H +GQE +V + + Sbjct: 22 DINKIGAKESIKIFTQTQIIRTFEEEMIKLDKLGLVHGPLHTSVGQEGAMVAALSVMRDS 81 Query: 103 DQMITAYREH--------GHILACGVDAS-------------KIMAELTGRQGGISKGKG 141 D ++R H ++L D K M+E+ G G S G+G Sbjct: 82 DIANGSHRGHHLFLGKSLNYVLPDDFDPKNDDYDVNMDELIYKTMSEILGLSDGFSGGRG 141 Query: 142 GSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF 201 GSMH+ ++G G + IVG V G A++ K + I FGDG+ + G V ESF Sbjct: 142 GSMHLRWEESGVIGTNAIVGGGVPTALGAAWSKKRSGNQDIVFTSFGDGSCHIGNVLESF 201 Query: 202 NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 N+A+L+ L + + IENN YA+ T++ S S RG F+IP +VDG D +V+ M Sbjct: 202 NLASLYELPLCFYIENNGYAVSTTLEEQSKDIRMSSRGQGFSIPAYKVDGQDPFSVRTAM 261 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHS---MSDPANYRTREEINEMRSNHDPIEQVRKRL 318 + A + RA KGP I+E+ YR+ HS YR+++E + + D + ++K L Sbjct: 262 EMAEKHMRAGKGPFILEVDVYRHFHHSGGIKGSAFGYRSKDE-EKKETERDALNFIQKIL 320 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVE 345 + W ++ ++ I+ + ++ SV+ Sbjct: 321 IEKSWITQNEIDVIKNRIEVMVQKSVK 347 >gi|182437558|ref|YP_001825277.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces griseus subsp. griseus NBRC 13350] gi|326778213|ref|ZP_08237478.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces cf. griseus XylebKG-1] gi|178466074|dbj|BAG20594.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces griseus subsp. griseus NBRC 13350] gi|326658546|gb|EGE43392.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces cf. griseus XylebKG-1] Length = 386 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 104/347 (29%), Positives = 165/347 (47%), Gaps = 19/347 (5%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSA------YRLMLLIRRFEEKAGQLY 73 + +AK+ +S V + EG V + +LSA YR M+L RRF+ +A L Sbjct: 19 TSAAKKPQSSEPQLVQLLTPEGERVEHPDYSIDLSADELRGLYRDMVLTRRFDAEATALQ 78 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQ 133 G +G + L +GQEA +G +L + D + YREHG GVD + ++ G Sbjct: 79 RQGELGLWASL-LGQEAAQIGSGRALRDDDYVFPTYREHGVAWCRGVDPTNLLGMFRGVN 137 Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 G + H+++ ++G+Q TG A +D + FGDGA++ Sbjct: 138 HGGWDPNSNNFHLYTI---------VIGSQTLHATGYAMGVAKDGADSAVIAYFGDGASS 188 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 QG V ESF +A++N V++ +NNQ+A+ R + + +R F PG++VDG D Sbjct: 189 QGDVAESFTFSAVYNAPVVFFCQNNQWAISEPTERQT-RVPLYQRAQGFGFPGVRVDGND 247 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIE 312 + A A A+ R +GP ++E TYR H+ S DP YR EE + DPI Sbjct: 248 VLACLAVTRSALERARRGEGPTLVEAFTYRMGAHTTSDDPTKYRADEERAAWEAK-DPIL 306 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 ++R L K+A E ++ + E ++ +PDP L+ Sbjct: 307 RLRAYLEKEKFADEAFFTALDEESETLGKRVREAVRAMPDPDPMALF 353 >gi|257082459|ref|ZP_05576820.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis E1Sol] gi|256990489|gb|EEU77791.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis E1Sol] gi|315150444|gb|EFT94460.1| dehydrogenase E1 component [Enterococcus faecalis TX0012] Length = 330 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/327 (29%), Positives = 167/327 (51%), Gaps = 5/327 (1%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ + S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ Sbjct: 3 MKALKKSGLSKEELIQAYRQVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMA 61 Query: 99 L-TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGG 156 + D + YR+ L G+ + I+ G++ S G+ H S ++ Sbjct: 62 FDPQKDYFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSF 121 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 V Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+E Sbjct: 122 SSTVSTQMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVE 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN+YA+ + A + R ++ G+ VDG D V +AV R KGP + Sbjct: 182 NNEYAISVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKL 241 Query: 277 IEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 IE++ R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ Sbjct: 242 IELMVSRLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEE 300 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 +R IN + + A++ +P P + ++ Sbjct: 301 IRAEINQATDEAEAMPDPVPTSILEEV 327 >gi|291296693|ref|YP_003508091.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Meiothermus ruber DSM 1279] gi|290471652|gb|ADD29071.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Meiothermus ruber DSM 1279] Length = 369 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 97/334 (29%), Positives = 166/334 (49%), Gaps = 19/334 (5%) Query: 37 PFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 PF G + YR ML R +EK L G F G EA VG+ Sbjct: 28 PFEHGLPPDRLQR-----FYRDMLAARLLDEKLVILIRTGKTS-FIAPHAGHEAAQVGIA 81 Query: 97 MSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 +L +G D + YR+ G +LA GV +I + G +KG+ H S + Sbjct: 82 HALRKGHDWLFPYYRDMGLVLALGVPLVEIFGQTLGNAADPAKGRQMPSHPGSKALNVFT 141 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + + + TG A + K RR+ ++ V FGDGA ++G + N AA+ ++V Sbjct: 142 VCSAIASHIPPATGAALSMKLRRTGQVAVCTFGDGATSEGDWHAGINFAAVQQAPAVFVC 201 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENN+YA+ ++S+ +A N + + ++ +PG VDG+D+ A M +A+ RA +GP Sbjct: 202 ENNRYAISVNISKQTASENIAIKAQAYGMPGYYVDGLDVLASYFVMQEAIERARAGQGPS 261 Query: 276 IIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHN-----KWASEGDL 329 ++E++ +R+ HS + D + YR+REE+ R DP+++ ++ L +WA+ Sbjct: 262 LVELVVHRFGAHSSADDDSRYRSREELAAER-QQDPLQRYQRFLEQQGLWDAQWAN---- 316 Query: 330 KEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 E+ + + K + +++ A EPDP E++ D+ Sbjct: 317 -ELRLEISKALEAALQEALQAGEPDPLEMFDDVF 349 >gi|148553591|ref|YP_001261173.1| dehydrogenase, E1 component [Sphingomonas wittichii RW1] gi|148498781|gb|ABQ67035.1| dehydrogenase, E1 component [Sphingomonas wittichii RW1] Length = 331 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 153/307 (49%), Gaps = 12/307 (3%) Query: 51 QELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMSLT 100 Q L Y M IR +E + + Y G + G HLC GQE VG+ + L Sbjct: 10 QRLWMYETMAKIRLYEARIAEAYMEGKRPLFNMAKGPLPGEMHLCDGQEPCAVGLSVHLG 69 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D + +R H +A GVD ++ AE+ GR G+S G+GG MH+F F+ GI+ Sbjct: 70 AEDYLSCHHRSHAQAIAKGVDLRRMTAEIFGRSAGLSGGRGGHMHLFDFDKLFWTS-GII 128 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 G ++ G A A K I V C G+GA NQG +E N+AA+W L + +IE+N + Sbjct: 129 GQNMAPAAGAALARKLNGEAGIAVACIGEGAVNQGAFHEVMNLAAVWKLPFLCIIEDNGW 188 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ ++A R ++ + G V G D V + +AVA RA +GP +IE+ Sbjct: 189 AVSVPKHASTAVPENHVRAAAYGMSGEYVAGNDPDRVFEAVGRAVARARAGEGPSLIEIQ 248 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 T R +GH M D Y +E ++ DP+ + R+RL+ S I+ +R+ + Sbjct: 249 TTRLQGHFMGDTEGYLPPDE-RAAKAALDPLPRYRERLVSEGLLSADLEATIDTRIRREL 307 Query: 341 NNSVEFA 347 +++ EFA Sbjct: 308 DDAFEFA 314 >gi|294781627|ref|ZP_06746963.1| dehydrogenase E1 component [Enterococcus faecalis PC1.1] gi|294451323|gb|EFG19789.1| dehydrogenase E1 component [Enterococcus faecalis PC1.1] Length = 328 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 5/321 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGD 103 S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ + D Sbjct: 7 SGLSKEELIQAYRQVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMAFDPQKD 65 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ L G+ + I+ G++ S G+ H S ++ V Sbjct: 66 YFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSFSSTVST 125 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+ENN+YA+ Sbjct: 126 QMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVENNEYAI 185 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A + R ++ G+ VDG D V +AV R KGP +IE++ Sbjct: 186 SVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKLIELMVS 245 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ +R IN Sbjct: 246 RLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEEIRAEIN 304 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + + A++ +P P + ++ Sbjct: 305 QATDEAEAMPDPVPTSILEEV 325 >gi|29376214|ref|NP_815368.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis V583] gi|256961836|ref|ZP_05566007.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis Merz96] gi|257085091|ref|ZP_05579452.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis Fly1] gi|293382901|ref|ZP_06628819.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis R712] gi|293389610|ref|ZP_06634067.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis S613] gi|312907629|ref|ZP_07766620.1| dehydrogenase E1 component [Enterococcus faecalis DAPTO 512] gi|312910246|ref|ZP_07769093.1| dehydrogenase E1 component [Enterococcus faecalis DAPTO 516] gi|29343677|gb|AAO81438.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis V583] gi|256952332|gb|EEU68964.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis Merz96] gi|256993121|gb|EEU80423.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis Fly1] gi|291079566|gb|EFE16930.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis R712] gi|291081227|gb|EFE18190.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis S613] gi|310626657|gb|EFQ09940.1| dehydrogenase E1 component [Enterococcus faecalis DAPTO 512] gi|311289519|gb|EFQ68075.1| dehydrogenase E1 component [Enterococcus faecalis DAPTO 516] gi|315575772|gb|EFU87963.1| dehydrogenase E1 component [Enterococcus faecalis TX0309B] gi|315580424|gb|EFU92615.1| dehydrogenase E1 component [Enterococcus faecalis TX0309A] Length = 330 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/327 (29%), Positives = 167/327 (51%), Gaps = 5/327 (1%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ + S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ Sbjct: 3 MKALKKSGLSKEELIQAYREVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMA 61 Query: 99 L-TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGG 156 + D + YR+ L G+ + I+ G++ S G+ H S ++ Sbjct: 62 FDPQKDYFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSF 121 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 V Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+E Sbjct: 122 SSTVSTQMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVE 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN+YA+ + A + R ++ G+ VDG D V +AV R KGP + Sbjct: 182 NNEYAISVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKL 241 Query: 277 IEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 IE++ R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ Sbjct: 242 IELMVSRLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEE 300 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 +R IN + + A++ +P P + ++ Sbjct: 301 IRAEINQATDEAEAMPDPVPTSILEEV 327 >gi|257089976|ref|ZP_05584337.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis CH188] gi|256998788|gb|EEU85308.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis CH188] Length = 330 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 5/321 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGD 103 S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ + D Sbjct: 9 SGLSKEELIQAYRQVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMAFDPQKD 67 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ L G+ + I+ G++ S G+ H S ++ V Sbjct: 68 YFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSFSSTVST 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+ENN+YA+ Sbjct: 128 QMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVENNEYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A + R ++ G+ VDG D V +AV R KGP +IE++ Sbjct: 188 SVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKLIELMVS 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ +R IN Sbjct: 248 RLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEEIRAEIN 306 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + + A++ +P P + ++ Sbjct: 307 QATDEAEAMPDPVPTSILEEV 327 >gi|295113055|emb|CBL31692.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus sp. 7L76] Length = 330 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 5/321 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGD 103 S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ + D Sbjct: 9 SGLSKEELIQAYRQVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMAFDPQKD 67 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ L G+ + I+ G++ S G+ H S ++ V Sbjct: 68 YFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSFSSTVST 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+ENN+YA+ Sbjct: 128 QMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVENNEYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A + R ++ G+ VDG D V +AV R KGP +IE++ Sbjct: 188 SVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKLIELMVS 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ +R IN Sbjct: 248 RLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEEIRTEIN 306 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + + A++ +P P + ++ Sbjct: 307 QATDEAEAMPDPVPTSILEEV 327 >gi|323448899|gb|EGB04792.1| hypothetical protein AURANDRAFT_31937 [Aureococcus anophagefferens] Length = 349 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 95/313 (30%), Positives = 153/313 (48%), Gaps = 18/313 (5%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 AY M L R+FE Q Y G + GF HL GQE + + LT+ D + YREH H Sbjct: 41 AYETMQLCRQFENACAQSYMQGSIRGFMHLDNGQETIPALIADQLTKDDIKYSYYREHTH 100 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 LA GV K+MAEL + GG +G GGSMH++ F GG +V Q+ G A + Sbjct: 101 ALASGVPPEKVMAELFAKDGGTCRGTGGSMHVYDVDTHFQGGWALVAEQLPYAAGAARSI 160 Query: 175 KYRR-------------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 R D++ VV G+G + G++ E N+AA +L ++ + +N A Sbjct: 161 LLDRELGLTKAKADGGDDDRLTVVFCGEGGSQNGRLAEVLNVAAKESLPLLILCIDNGRA 220 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T + + + G + +PG +VDG ++ V T + + R+ P I+++ T Sbjct: 221 INTFTPDVAQNSEVWRAGEHYGVPGAKVDGQNLEDVLKTGRAVIDHVRSTSSPAILQVHT 280 Query: 282 YRYRGHSMSDPANYRTRE-EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YR +GHS +DP + R R+ E R+ DP++ + E L + + +++ Sbjct: 281 YRLQGHSPADPEHERGRKAEKTWARAEADPLKIFEALGV----LPEDVLSDRKAKASQVV 336 Query: 341 NNSVEFAQSDKEP 353 ++V FA++ P Sbjct: 337 KDAVAFAKASPPP 349 >gi|257419387|ref|ZP_05596381.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis T11] gi|257161215|gb|EEU91175.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis T11] Length = 330 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 5/321 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGD 103 S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ + D Sbjct: 9 SGLSKEELIQAYRQVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMAFNPQKD 67 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ L G+ + I+ G++ S G+ H S ++ V Sbjct: 68 YFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSFSSTVST 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+ENN+YA+ Sbjct: 128 QMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVENNEYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A + R ++ G+ VDG D V +AV R KGP +IE++ Sbjct: 188 SVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKLIELMVS 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ +R IN Sbjct: 248 RLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEEIRTEIN 306 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + + A++ +P P + ++ Sbjct: 307 QATDEAEAMPDPVPTSILEEV 327 >gi|311694525|gb|ADP97398.1| branched-chain alpha-keto acid dehydrogenase complex E1 alpha subunit [marine bacterium HP15] Length = 382 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 94/321 (29%), Positives = 160/321 (49%), Gaps = 3/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + + +K++ L YR M+ R +E+ G + F C G+EA ++G +L +G Sbjct: 27 KAPDLDKDKALRIYRAMVTTRILDERMLAAQRQGRLS-FYMQCTGEEAAVIGSAAALDDG 85 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D ++ YRE G + G + M +L G + KG+ +H S K + + Sbjct: 86 DMIMAQYREQGALAYRGFTIDEFMNQLFGNEMDYGKGRQMPVHYGSKKLNYMTISSPLAT 145 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+ K R + FG+GAA++G + + N+AA+ + VI++ NN YA+ Sbjct: 146 QIPQAAGYAYGQKLRGEGLCTITYFGEGAASEGDFHAALNMAAVHRVPVIFLCRNNGYAI 205 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T + A + R + + ++VDG DI A+ +A H P++IE ++Y Sbjct: 206 STPAAEQFAADGVAPRAYGYKMDVIRVDGNDILAMYQATQEARKLAVEHNRPVLIEAMSY 265 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS S DP+ YR+++E R DPI ++R L KW SE D K+++ N+R+ + Sbjct: 266 RLAAHSSSDDPSGYRSKDEEAVWREK-DPILRMRLWLESKKWWSEDDEKQLQENMRREVL 324 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 +++ AQ P L SD+ Sbjct: 325 ETMKRAQKRPPPPLESLVSDV 345 >gi|303289341|ref|XP_003063958.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454274|gb|EEH51580.1| predicted protein [Micromonas pusilla CCMP1545] Length = 336 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 100/327 (30%), Positives = 161/327 (49%), Gaps = 25/327 (7%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E +AY M L R FE + Q Y G + GF HL GQE++ + ++ + D Sbjct: 12 LSDEDLTNAYETMQLCRDFENECNQAYMAGKIRGFMHLDNGQESIPALLSNAIRKTDLKH 71 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H +ACGVD +MAE+ GR GG +G GGSMH++ + F GG +V Q+ Sbjct: 72 SYYRDHCHAIACGVDPGAVMAEIFGRDGGSCRGTGGSMHVYDVETNFQGGWALVAEQLPY 131 Query: 167 GTGIAFA---NKY----RRSDKICVVCFGDGAANQGQVYESFNIAAL------W------ 207 G A + +K+ D+I +V G+G A G++ E N AA W Sbjct: 132 AVGAARSIVLDKHLGTGEAEDRIAIVFVGEGGAQNGRMAECLNAAAKARSISHWSPYDRE 191 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 NL +++++ +N A+ T + +G + IPG+ DG +++ A+ + Sbjct: 192 NLPILFLVIDNGRAINTFTKDVATNQEVFNQGKHYGIPGILADGQNVQDTMRIGRAAIQH 251 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTR-EEINEMRSNHDPIEQVRKRLLHNKWASE 326 R +KGP I+++ T+R+ GHS +DP + R R +E R+ DPI K + A + Sbjct: 252 VR-NKGPAILQVHTFRFNGHSPADPEHERNRKDEKRWARATCDPI----KIFEESDDAKK 306 Query: 327 GDLKEIEMNVRKIINNSVEFAQSDKEP 353 D K R + ++ FA + P Sbjct: 307 VDQKAALARARDEVAKALAFANASPPP 333 >gi|4572518|gb|AAD23845.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572527|gb|AAD23854.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572529|gb|AAD23856.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] Length = 135 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 76/137 (55%), Positives = 103/137 (75%), Gaps = 3/137 (2%) Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 GQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI Sbjct: 1 GQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDI 58 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQ 313 V+ A AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI Sbjct: 59 LCVREATRFAAAYCRSGKGPILLELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIML 118 Query: 314 VRKRLLHNKWASEGDLK 330 ++ R++++ AS +LK Sbjct: 119 LKDRMVNSNLASVEELK 135 >gi|315172211|gb|EFU16228.1| dehydrogenase E1 component [Enterococcus faecalis TX1346] Length = 330 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/327 (29%), Positives = 167/327 (51%), Gaps = 5/327 (1%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ + S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ Sbjct: 3 MKALKKSGLSKEELIQAYREVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMA 61 Query: 99 L-TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGG 156 + D + YR+ L G+ + I+ G++ S G+ H S ++ Sbjct: 62 FDPQKDYFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSF 121 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 V Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+E Sbjct: 122 SSTVSTQMPLATGVGYAAQLQKADFVTLTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVE 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN+YA+ + A + R ++ G+ VDG D V +AV R KGP + Sbjct: 182 NNEYAISVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKL 241 Query: 277 IEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 IE++ R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ Sbjct: 242 IELMVSRLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEE 300 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 +R IN + + A++ +P P + ++ Sbjct: 301 IRAEINQATDEAEAMPDPVPTSILEEV 327 >gi|284045531|ref|YP_003395871.1| pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] gi|283949752|gb|ADB52496.1| Pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] Length = 339 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 93/249 (37%), Positives = 136/249 (54%), Gaps = 8/249 (3%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAV-IVGMKMSLTEG 102 + + ++E+ L +R ML+IRRFEE +L VG F H+ IGQE +V +++ G Sbjct: 2 LPDVSRERLLEMHRRMLVIRRFEEALIELTADYDVGHF-HVSIGQEVTGVVALEL-FEPG 59 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + T +R HGH+LA G D+ K++AE+ G+ G + GKGG++H+ S + GF G Sbjct: 60 DVVFTTHRNHGHLLARGADSGKMLAEILGKATGYNSGKGGTLHLASLELGFPTTSSATGG 119 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY-A 221 V L G F R+ + + FGDGA +G +E+ NIAAL L VI+++ENN A Sbjct: 120 CVPLAVGAGFGFSRRKVPNVSICAFGDGALEEGAWHEAVNIAALEKLPVIFLVENNSLDA 179 Query: 222 MGTSV----SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 +G S A T+ F +P + +DG+D AV M AV RA +GP I Sbjct: 180 VGQRANEYPSSTLAATDLCDLARPFGVPTVAIDGLDAGAVHDEMSTAVKRARAGEGPSFI 239 Query: 278 EMLTYRYRG 286 E T R+ G Sbjct: 240 EARTVRWPG 248 >gi|255975754|ref|ZP_05426340.1| branched-chain alpha-keto acid dehydrogenase E1 component, alpha unit [Enterococcus faecalis T2] gi|256959071|ref|ZP_05563242.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis DS5] gi|257079102|ref|ZP_05573463.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis JH1] gi|257086948|ref|ZP_05581309.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis D6] gi|257416185|ref|ZP_05593179.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis AR01/DG] gi|307269472|ref|ZP_07550811.1| dehydrogenase E1 component [Enterococcus faecalis TX4248] gi|307277973|ref|ZP_07559057.1| dehydrogenase E1 component [Enterococcus faecalis TX0860] gi|255968626|gb|EET99248.1| branched-chain alpha-keto acid dehydrogenase E1 component, alpha unit [Enterococcus faecalis T2] gi|256949567|gb|EEU66199.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis DS5] gi|256987132|gb|EEU74434.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis JH1] gi|256994978|gb|EEU82280.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis D6] gi|257158013|gb|EEU87973.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis ARO1/DG] gi|306505370|gb|EFM74556.1| dehydrogenase E1 component [Enterococcus faecalis TX0860] gi|306514092|gb|EFM82668.1| dehydrogenase E1 component [Enterococcus faecalis TX4248] gi|315027816|gb|EFT39748.1| dehydrogenase E1 component [Enterococcus faecalis TX2137] gi|315037072|gb|EFT49004.1| dehydrogenase E1 component [Enterococcus faecalis TX0027] gi|315145139|gb|EFT89155.1| dehydrogenase E1 component [Enterococcus faecalis TX2141] gi|315162318|gb|EFU06335.1| dehydrogenase E1 component [Enterococcus faecalis TX0645] gi|315169824|gb|EFU13841.1| dehydrogenase E1 component [Enterococcus faecalis TX1342] gi|315577614|gb|EFU89805.1| dehydrogenase E1 component [Enterococcus faecalis TX0630] gi|327535225|gb|AEA94059.1| 3-methyl-2-oxobutanoate dehydrogenase [Enterococcus faecalis OG1RF] gi|329571602|gb|EGG53283.1| 2-oxoisovalerate dehydrogenase subunit alpha [Enterococcus faecalis TX1467] Length = 330 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 5/321 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGD 103 S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ + D Sbjct: 9 SGLSKEELIQAYRQVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMAFDPQKD 67 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ L G+ + I+ G++ S G+ H S ++ V Sbjct: 68 YFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSFSSTVST 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+ENN+YA+ Sbjct: 128 QMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVENNEYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A + R ++ G+ VDG D V +AV R KGP +IE++ Sbjct: 188 SVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKLIELMVS 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ +R IN Sbjct: 248 RLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEEIRAEIN 306 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + + A++ +P P + ++ Sbjct: 307 QATDEAEAMPDPVPTSILEEV 327 >gi|300860483|ref|ZP_07106570.1| 2-oxoisovalerate dehydrogenase subunit alpha [Enterococcus faecalis TUSoD Ef11] gi|300849522|gb|EFK77272.1| 2-oxoisovalerate dehydrogenase subunit alpha [Enterococcus faecalis TUSoD Ef11] Length = 328 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 5/321 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGD 103 S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ + D Sbjct: 7 SGLSKEELIQAYRQVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMAFNPQKD 65 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ L G+ + I+ G++ S G+ H S ++ V Sbjct: 66 YFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSFSSTVST 125 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+ENN+YA+ Sbjct: 126 QMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVENNEYAI 185 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A + R ++ G+ VDG D V +AV R KGP +IE++ Sbjct: 186 SVPIEEQYANKRMADRAKAYGFEGVTVDGSDFAEVYLAFKEAVKAARGKKGPKLIELMVS 245 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ +R IN Sbjct: 246 RLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEEIRAEIN 304 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + + A++ +P P + ++ Sbjct: 305 QATDEAEAMPDPVPTSILEEV 325 >gi|302529431|ref|ZP_07281773.1| pyruvate dehydrogenase E1 component alpha subunit [Streptomyces sp. AA4] gi|302438326|gb|EFL10142.1| pyruvate dehydrogenase E1 component alpha subunit [Streptomyces sp. AA4] Length = 326 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 159/314 (50%), Gaps = 14/314 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 L YR M+LIR +EE + Y G G+V G HL GQE V G+ LT Sbjct: 7 LDLYRTMVLIRTYEEAILREYHADKKPVFDIGAGLVPGEMHLSAGQEPVAAGVCAHLTGD 66 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + +R H +A GVD ++ AE+ GR G+ +G+GG MH+F F GI+ Sbjct: 67 DAVTATHRPHHFAIAHGVDLDRMTAEIFGRTTGLGRGRGGHMHLFDPAVHFSCS-GIIAE 125 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 G A A + R +D++ V G+GAANQG +ES N+AALW L V++V+E+N + + Sbjct: 126 GYPPALGQALAFQRRGTDRVAVAVTGEGAANQGAFHESLNLAALWQLPVVFVVEDNDWGI 185 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 S ++ T+ + R + IPG++V+ + AV +A+ RA +GP +IE+ T Sbjct: 186 SVPRSASTCVTSNADRAAGYGIPGVRVEDNSVEAVHEAAGQAITRARAGEGPSLIEVHTL 245 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D YR+ + R DP+ +L + + + + + + Sbjct: 246 RLWGHFEGDAQGYRSDLDGVPGR---DPLPTYENQLRASGDLDDAKVAGYQAAASERVEA 302 Query: 343 SVEFAQSDKEPDPA 356 ++ FA+ EPDPA Sbjct: 303 AIAFAKESPEPDPA 316 >gi|319645099|ref|ZP_07999332.1| BkdAA protein [Bacillus sp. BT1B_CT2] gi|317392908|gb|EFV73702.1| BkdAA protein [Bacillus sp. BT1B_CT2] Length = 330 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 153/314 (48%), Gaps = 5/314 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 EQ + Y+ MLL R+ +E+ L G + F C GQEA VG +L E D + Sbjct: 11 LTDEQAIDMYKTMLLARKLDERMWLLNRSGKIP-FVISCQGQEAAQVGAAFALDRENDYV 69 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR+ G +LA G+ A +M + + S GK H KN G V QV Sbjct: 70 LPYYRDMGVVLAFGMTAKDLMLSAFAKAEDPNSGGKQMPSHFGQKKNRIVTGSSPVTTQV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G+A A + + D V FG+G++NQG +E N AA+ L VI++ ENN+YA+ Sbjct: 130 PHAVGVALAGRLDKKDIATFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAISV 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + A N S R V + +PG+ VDG D V + +A +GP +IE ++YR Sbjct: 190 PYEKQVACENISDRAVGYGMPGVTVDGNDPLEVYKAVKEARERAGRGEGPTLIETISYRL 249 Query: 285 RGHSM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D +YR REE+ E + N DP+ + + L + K+I + I+N + Sbjct: 250 TPHSSDDDDRSYREREEVAEAKKN-DPLNKFAQYLKEAGLLDDQSEKQISDEITNIVNEA 308 Query: 344 VEFAQSDKEPDPAE 357 ++A+ DP + Sbjct: 309 TDYAEHAPYADPED 322 >gi|4572514|gb|AAD23841.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572515|gb|AAD23842.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572516|gb|AAD23843.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572517|gb|AAD23844.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572519|gb|AAD23846.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572520|gb|AAD23847.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572521|gb|AAD23848.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572522|gb|AAD23849.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572523|gb|AAD23850.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572524|gb|AAD23851.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572525|gb|AAD23852.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572526|gb|AAD23853.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572528|gb|AAD23855.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572531|gb|AAD23858.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572532|gb|AAD23859.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572533|gb|AAD23860.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572534|gb|AAD23861.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572535|gb|AAD23862.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572536|gb|AAD23863.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572537|gb|AAD23864.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572538|gb|AAD23865.1| pyruvate dehydrogenase E1 alpha subunit [Pan troglodytes] gi|4572539|gb|AAD23866.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572540|gb|AAD23867.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572541|gb|AAD23868.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572542|gb|AAD23869.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572543|gb|AAD23870.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572544|gb|AAD23871.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572545|gb|AAD23872.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572546|gb|AAD23873.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572547|gb|AAD23874.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572549|gb|AAD23876.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] gi|4572550|gb|AAD23877.1| pyruvate dehydrogenase E1 alpha subunit [Pan troglodytes] Length = 135 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 76/137 (55%), Positives = 103/137 (75%), Gaps = 3/137 (2%) Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 GQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI Sbjct: 1 GQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDI 58 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQ 313 V+ A AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI Sbjct: 59 LCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIML 118 Query: 314 VRKRLLHNKWASEGDLK 330 ++ R++++ AS +LK Sbjct: 119 LKDRMVNSNLASVEELK 135 >gi|229545729|ref|ZP_04434454.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Enterococcus faecalis TX1322] gi|256619155|ref|ZP_05476001.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis ATCC 4200] gi|256853217|ref|ZP_05558587.1| TPP-dependent branched-chain alpha-keto acid dehydrogenase [Enterococcus faecalis T8] gi|256965033|ref|ZP_05569204.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis HIP11704] gi|307273131|ref|ZP_07554377.1| dehydrogenase E1 component [Enterococcus faecalis TX0855] gi|307274866|ref|ZP_07556029.1| dehydrogenase E1 component [Enterococcus faecalis TX2134] gi|307291904|ref|ZP_07571773.1| dehydrogenase E1 component [Enterococcus faecalis TX0411] gi|229309179|gb|EEN75166.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Enterococcus faecalis TX1322] gi|256598682|gb|EEU17858.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis ATCC 4200] gi|256711676|gb|EEU26714.1| TPP-dependent branched-chain alpha-keto acid dehydrogenase [Enterococcus faecalis T8] gi|256955529|gb|EEU72161.1| branched-chain alpha-keto acid dehydrogenase E1 component [Enterococcus faecalis HIP11704] gi|306496902|gb|EFM66450.1| dehydrogenase E1 component [Enterococcus faecalis TX0411] gi|306508314|gb|EFM77421.1| dehydrogenase E1 component [Enterococcus faecalis TX2134] gi|306510116|gb|EFM79140.1| dehydrogenase E1 component [Enterococcus faecalis TX0855] gi|315029291|gb|EFT41223.1| dehydrogenase E1 component [Enterococcus faecalis TX4000] gi|315034063|gb|EFT45995.1| dehydrogenase E1 component [Enterococcus faecalis TX0017] gi|315168942|gb|EFU12959.1| dehydrogenase E1 component [Enterococcus faecalis TX1341] Length = 330 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 5/321 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGD 103 S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ + D Sbjct: 9 SGLSKEELIQAYRQVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMAFNPQKD 67 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ L G+ + I+ G++ S G+ H S ++ V Sbjct: 68 YFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSFSSTVST 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+ENN+YA+ Sbjct: 128 QMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVENNEYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A + R ++ G+ VDG D V +AV R KGP +IE++ Sbjct: 188 SVPIEEQYANKRMADRAKAYGFEGVTVDGSDFAEVYLAFKEAVKAARGKKGPKLIELMVS 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ +R IN Sbjct: 248 RLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEEIRAEIN 306 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + + A++ +P P + ++ Sbjct: 307 QATDEAEAMPDPVPTSILEEV 327 >gi|5901696|gb|AAD55377.1|AF149712_5 TPP-dependent branched-chain alpha-keto acid dehydrogenase, E1 alpha subunit [Enterococcus faecalis] Length = 330 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 5/321 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGD 103 S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ + D Sbjct: 9 SGLSKEELIQAYRQVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMAFNPQKD 67 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ L G+ + I+ G++ S G+ H S ++ V Sbjct: 68 YFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSFSSTVST 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+ENN+YA+ Sbjct: 128 QMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAINFAGVKKLPVIFVVENNEYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A + R ++ G+ VDG D V +AV R KGP +IE++ Sbjct: 188 SVPIEEQYANKRMADRAKAYGFEGVTVDGSDFAEVYLAFKEAVKAARGKKGPKLIELMVS 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ +R IN Sbjct: 248 RLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEEIRAEIN 306 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + + A++ +P P + ++ Sbjct: 307 QATDEAEAMPDPVPTSILEEV 327 >gi|227553461|ref|ZP_03983510.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis HH22] gi|227177405|gb|EEI58377.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis HH22] Length = 330 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 96/327 (29%), Positives = 167/327 (51%), Gaps = 5/327 (1%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ + S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ Sbjct: 3 MKALKKSGLSKEELIQAYREVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMA 61 Query: 99 L-TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGG 156 + D + YR+ L G+ + I+ G++ S G+ H S ++ Sbjct: 62 FDPQKDYFLPYYRDMTACLVWGMTSKDILMGSFGKETDPSSHGRQMPNHYGSKEHNIVSF 121 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 V Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+E Sbjct: 122 SSTVSTQMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVE 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN+YA+ + A + R ++ G+ VDG D V +AV R KGP + Sbjct: 182 NNEYAISVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKL 241 Query: 277 IEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 IE++ R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ Sbjct: 242 IELMVSRLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEE 300 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 +R IN + + A++ +P P + ++ Sbjct: 301 IRAEINQATDEAEAMPDPVPTSILEEV 327 >gi|312899507|ref|ZP_07758837.1| dehydrogenase E1 component [Enterococcus faecalis TX0470] gi|311293377|gb|EFQ71933.1| dehydrogenase E1 component [Enterococcus faecalis TX0470] Length = 330 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 5/321 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGD 103 S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ + D Sbjct: 9 SGLSKEELIQAYREVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMAFDPQKD 67 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ L G+ + I+ G++ S G+ H S ++ V Sbjct: 68 YFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSFSSTVST 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+ENN+YA+ Sbjct: 128 QMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVENNEYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A + R ++ G+ VDG D V +AV R KGP +IE++ Sbjct: 188 SVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAAREKKGPKLIELMVS 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ +R IN Sbjct: 248 RLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLADEDIAKIDEEIRAEIN 306 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + + A++ +P P + ++ Sbjct: 307 QATDEAEAMPDPVPTSILEEV 327 >gi|227518846|ref|ZP_03948895.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis TX0104] gi|227073695|gb|EEI11658.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis TX0104] Length = 330 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 96/327 (29%), Positives = 167/327 (51%), Gaps = 5/327 (1%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ + S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ Sbjct: 3 MKALKKSGLSKEELIQAYREVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMA 61 Query: 99 L-TEGDQMITAYREHGHILACGVDASKIMAELTGRQ-GGISKGKGGSMHMFSTKNGFYGG 156 + D + YR+ L G+ + I+ G++ S G+ H S ++ Sbjct: 62 FDPQKDYFLPYYRDMTACLVWGMTSKDILMGSFGKEVDPSSHGRQMPNHYGSKEHNIVSF 121 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 V Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+E Sbjct: 122 SSTVSTQMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVE 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN+YA+ + A + R ++ G+ VDG D V +AV R KGP + Sbjct: 182 NNEYAISVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKL 241 Query: 277 IEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 IE++ R HS D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ Sbjct: 242 IELMVSRLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEE 300 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 +R IN + + A++ +P P + ++ Sbjct: 301 IRAEINQATDEAEAMPDPVPTSILEEV 327 >gi|323480821|gb|ADX80260.1| 2-oxoisovalerate dehydrogenase subunit alpha [Enterococcus faecalis 62] Length = 328 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 95/321 (29%), Positives = 164/321 (51%), Gaps = 5/321 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGD 103 S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ + D Sbjct: 7 SGLSKEELIQAYRQVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMAFDPQKD 65 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ L G+ + I+ G++ S G+ H S ++ V Sbjct: 66 YFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSFSSTVST 125 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+ENN+YA+ Sbjct: 126 QMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVENNEYAI 185 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A + R ++ G+ VDG D V +AV R KGP +IE++ Sbjct: 186 SVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKLIELMVS 245 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D + YR++EEI EM+ N D ++ K+L+ + ++ D+ +I+ +R IN Sbjct: 246 RLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLIEEGYLTDEDIAKIDEEIRAEIN 304 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + + A++ +P P + ++ Sbjct: 305 QATDEAEAMPDPVPTSILEEV 325 >gi|255972702|ref|ZP_05423288.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis T1] gi|312951590|ref|ZP_07770486.1| dehydrogenase E1 component [Enterococcus faecalis TX0102] gi|255963720|gb|EET96196.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis T1] gi|310630556|gb|EFQ13839.1| dehydrogenase E1 component [Enterococcus faecalis TX0102] gi|315152388|gb|EFT96404.1| dehydrogenase E1 component [Enterococcus faecalis TX0031] gi|315158169|gb|EFU02186.1| dehydrogenase E1 component [Enterococcus faecalis TX0312] Length = 330 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 163/321 (50%), Gaps = 5/321 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGD 103 S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ + D Sbjct: 9 SGLSKEELIQAYRQVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMAFDPQKD 67 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ L G+ + I+ G++ S G+ H S ++ V Sbjct: 68 YFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSFSSTVST 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ L TG+ +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+ENN+YA+ Sbjct: 128 QMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVENNEYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A + R ++ G+ VDG D V +AV R KGP +IE++ Sbjct: 188 SVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKLIELMVS 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D + YR++EEI EM+ N D ++ K+LL + + D+ +I+ +R IN Sbjct: 248 RLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTAEDIAKIDEEIRAEIN 306 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + + A++ +P P + ++ Sbjct: 307 QATDEAEAMPDPVPTSILEEV 327 >gi|297559009|ref|YP_003677983.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843457|gb|ADH65477.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 361 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 95/336 (28%), Positives = 171/336 (50%), Gaps = 20/336 (5%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 S VD +PF ++E+ L+AY +++ RR ++A L G + + GQ Sbjct: 22 SPVDGAALPFP--------DRERLLAAYTSLVIGRRVNDQASALVRQGRLAVYPS-SHGQ 72 Query: 89 EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 EA G ++L EGD + YR+ ++A GVD +++ L +G G H + Sbjct: 73 EACQTGAALALAEGDWLFPTYRDTAAVVARGVDPVQVLTLL---KGDWHSGYDPYAHRVA 129 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 + + Q+ G+A A + R D + + GDGA ++G +E+ N AA++ Sbjct: 130 PQAT------PLATQLLHAVGVAHAARLRGEDTVVMAMCGDGATSEGDFHEALNFAAVFR 183 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 V++ ++NN+YA+ ++R +A + + +GV + + +VDG D AV A +D+AVA Sbjct: 184 APVVFFVQNNEYAISVPLARQTAAPSLAHKGVGYGVNAERVDGNDTPAVLAVLDRAVAAA 243 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 RA +GP ++E TYR + H+ +D A YRT+EE++ + DP+ ++ L + ++ Sbjct: 244 RAGEGPQLVEAHTYRMQAHTNADDATRYRTQEEVDPWEAR-DPLLRMEAYLTRKRVLTKA 302 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 I + + E D +P+PAEL++ + Sbjct: 303 RKARIAEDAEAVAAAMREGVTRDTDPEPAELFAHVF 338 >gi|28465347|dbj|BAC57470.1| pyruvate dehydrogenase E1 alpha subunit [Nicotiana tabacum] Length = 136 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 78/142 (54%), Positives = 98/142 (69%), Gaps = 9/142 (6%) Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 GGHGIVGAQV LG G+AFA KY + + + +GDGAANQGQ++E+ N+AALW+L I V Sbjct: 1 GGHGIVGAQVPLGVGLAFAQKYSKEEHVTFAMYGDGAANQGQLFEALNMAALWDLPAILV 60 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH--- 271 ENN Y MGT+ RA+ + KRG +PG++VDGMD AVK +A + + H Sbjct: 61 CENNHYGMGTAEWRAAKSPAYYKRGDY--VPGLKVDGMDALAVK----QACKFAKEHALK 114 Query: 272 KGPIIIEMLTYRYRGHSMSDPA 293 GPII+EM TYRY GHSMSDPA Sbjct: 115 NGPIILEMDTYRYHGHSMSDPA 136 >gi|296271283|ref|YP_003653915.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Thermobispora bispora DSM 43833] gi|296094070|gb|ADG90022.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermobispora bispora DSM 43833] Length = 361 Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 98/318 (30%), Positives = 156/318 (49%), Gaps = 13/318 (4%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E E+ S YR ++L+RR +++A L G +G + L +GQEA VG +LT+ D Sbjct: 32 ELTAEEVRSLYRDLVLVRRIDKEAVALQRQGELGLWASL-LGQEAAQVGSGRALTDADMA 90 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 YREHG GVD ++ G G K + H+++ ++G+Q Sbjct: 91 FPTYREHGVAWCRGVDPVTLLGLFRGVSHGGWDPKEHNFHLYTI---------VIGSQTL 141 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A + + +V FGDGA +QG V ESF A+++N V++ +NNQ+A+ Sbjct: 142 HAVGYAMGIQRDGVEGAAIVYFGDGATSQGDVNESFIWASVFNAPVVFFCQNNQWAISEP 201 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + R S + KR F PG++VDG D+ A A KA+ + R +GP +IE TYR Sbjct: 202 IERQS-RIPLYKRASGFGFPGIRVDGNDVFACLAVTRKALQHAREGQGPTLIEAFTYRMG 260 Query: 286 GHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 H+ S DP YR E+ + DPIE+V+ L N+ A + I+ + + Sbjct: 261 AHTTSDDPTRYRLASELEAWKLK-DPIERVKAYLHKNRLADQDFFAAIDAEADALAKDLR 319 Query: 345 EFAQSDKEPDPAELYSDI 362 + + +P P ++ + Sbjct: 320 QRCLAMPDPRPEAIFEHV 337 >gi|218288446|ref|ZP_03492736.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Alicyclobacillus acidocaldarius LAA1] gi|218241419|gb|EED08593.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Alicyclobacillus acidocaldarius LAA1] Length = 370 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 94/312 (30%), Positives = 156/312 (50%), Gaps = 11/312 (3%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + E ++ YR M+ R F+ KA L G +G + GQEA V M+L D Sbjct: 37 VDDIPPEVMVAMYRHMVFARAFDRKAIALQRQGRIGTYAPFE-GQEAAQVASAMALAPED 95 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +YR+H + G + ++ +GR GI +G + S + Sbjct: 96 FVFPSYRDHAATMVLGQSPANVLLYWSGRVEGIRSPEGRHILPPSVP---------IATH 146 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V G A+A++YR+ + + FGDGA ++G +E+ N A +++L VI+ +NN YA+ Sbjct: 147 VLHAVGAAWASRYRKESAVSIAYFGDGATSEGDFHEALNFAGVFHLPVIFFCQNNGYAIS 206 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 SR SA ++R ++++I G++VDG D AV + +A + GP +IE +T+R Sbjct: 207 VPFSRQSASRTIAQRAIAYDIVGVRVDGNDAFAVYRAVKEARSRALHGLGPTLIEAVTFR 266 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ + DP YR ++ + E DPI ++R L K SE D +++ V+ + Sbjct: 267 MGAHTTADDPTRYRDQKAVVEAWQKRDPIVRLRLYLESQKLWSESDEAKLQDEVKARVEA 326 Query: 343 SVEFAQSDKEPD 354 +VE A S PD Sbjct: 327 AVEEALSIAPPD 338 >gi|288553309|ref|YP_003425244.1| branched-chain alpha-keto acid dehydrogenase E1 [Bacillus pseudofirmus OF4] gi|288544469|gb|ADC48352.1| branched-chain alpha-keto acid dehydrogenase E1 [Bacillus pseudofirmus OF4] Length = 330 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 104/314 (33%), Positives = 156/314 (49%), Gaps = 9/314 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + E+ L Y MLL R+ +E+ L G + F C GQEA VG +L E D + Sbjct: 11 LSDEKVLEMYETMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYI 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGA 162 + YR+ G +L G+ A+ +M L+G GG H KN G V Sbjct: 70 LPYYRDMGVVLTFGMTATDLM--LSGFAKAEDPNSGGRQMPGHFGQKKNRIVTGSSPVTT 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV GIA A K + D + FG+G++NQG +E N A + L V+ + ENN+YA+ Sbjct: 128 QVPHAVGIALAGKMQGEDFVTFTTFGEGSSNQGDFHEGANFAGVHKLPVVLMCENNKYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + A S R + + +PG+ VDG D AV A + +A R +GP +IE ++Y Sbjct: 188 SVPIEKQLACEKVSDRAIGYGMPGVTVDGNDPLAVYAAVKEAADRGRRGEGPSLIETVSY 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D YR+REE+ E + D I + L ++ L+E+E V KI+N Sbjct: 248 RLTPHSSDDDDRAYRSREEVEEAK-KLDSIITFAEYLREVGLLTDQSLEEMEKRVAKIVN 306 Query: 342 NSVEFAQSDKEPDP 355 ++ E+A++ DP Sbjct: 307 DATEYAENAPYADP 320 >gi|256762591|ref|ZP_05503171.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis T3] gi|256683842|gb|EEU23537.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Enterococcus faecalis T3] Length = 330 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 95/321 (29%), Positives = 163/321 (50%), Gaps = 5/321 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGD 103 S +KE+ + AYR +L RR +E+ QL +G F G E V M M+ + D Sbjct: 9 SGLSKEELIQAYRQVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMAFDPQKD 67 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ L G+ + I+ G++ S G+ H S ++ V Sbjct: 68 YFLPYYRDMTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSFSSTVST 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ L TG+ +A + +++D + + G+G++NQG+V E+ N A + L VI+V+ENN+YA+ Sbjct: 128 QMPLATGVGYAAQLQKADFVALTTTGEGSSNQGEVQEAMNFAGVKKLPVIFVVENNEYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A + R ++ G+ VDG D V +AV R KGP +IE++ Sbjct: 188 SVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKLIELMVS 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D + YR++EEI EM+ N D ++ K+LL + + D+ +I+ +R IN Sbjct: 248 RLTSHSADDDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLKDEDIAKIDEEIRAEIN 306 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + + A++ +P P + ++ Sbjct: 307 QATDEAEAMPDPVPTSILEEV 327 >gi|291455027|ref|ZP_06594417.1| dehydrogenase E1 component [Streptomyces albus J1074] gi|291357976|gb|EFE84878.1| dehydrogenase E1 component [Streptomyces albus J1074] Length = 480 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 148/294 (50%), Gaps = 12/294 (4%) Query: 16 ALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY-G 74 A PS +A R A + P G+ +S ++ R M+ IR EE+ Y Sbjct: 131 AWPPSTAAPRGAPGT------PPTHGWGLSTMVSDR-ARLVRDMVRIRVVEERLADHYRD 183 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 + H IGQEA VG+ + T D + T++R H LA G D ++AEL GRQ Sbjct: 184 EQEIRTPVHFSIGQEATAVGVCTATTPRDWVYTSHRSHAPYLAKGGDLRALVAELYGRQE 243 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G + G+GGSMH+ + GF G I+G +S+ G A+ R ++ + FGDGA + Sbjct: 244 GCAHGRGGSMHLIDQQAGFAGSAAILGEMISVAVGTAWEFARRGEARVALTYFGDGATEE 303 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSV-SRASAQTNFSKRGVSFNIPGMQVDGMD 253 G ES N AA+ + V++V ENN Y+ + + +R A T R + + QVDG D Sbjct: 304 GVFAESLNFAAVHRVPVVFVCENNLYSNCSPLAARQPAGTTIRGRAEAAGVRAEQVDGND 363 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH---SMSDPANYRTREEINEM 304 + AV +AV R +GP+++E+ TYR+R H YR+REEI+ Sbjct: 364 VFAVHEAALRAVRQAREGRGPVLLELATYRWREHVGPGWDHAYGYRSREEIDRW 417 >gi|295837714|ref|ZP_06824647.1| pyruvate dehydrogenase [Streptomyces sp. SPB74] gi|197695910|gb|EDY42843.1| pyruvate dehydrogenase [Streptomyces sp. SPB74] Length = 429 Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 95/312 (30%), Positives = 153/312 (49%), Gaps = 13/312 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + E+ YR M+L RRF+ +A L G +G + L +GQEA +G +L D Sbjct: 91 VEDITPEELRGFYRDMVLTRRFDAEATSLQRQGELGLWPSL-LGQEAAQIGSGRALRPDD 149 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YREHG GVD + ++ G G + H+++ ++G+Q Sbjct: 150 YVFPTYREHGVAWCRGVDPTLLLGMFRGANNGGWDPTSNNFHLYTI---------VIGSQ 200 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A +D V FGDGA++QG V E+F +A++N ++ +NNQ+A+ Sbjct: 201 ALHATGYAMGIGLDGADSAVVAYFGDGASSQGDVAEAFTFSAVYNAPTLFFCQNNQWAIS 260 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 R + + +R + PG++VDG D+ AV A A+A+ R+ +GP+++E TYR Sbjct: 261 EPTERQT-RVPLYQRARGYGFPGVRVDGNDVLAVLAVTRAALAHIRSGQGPMLVEAFTYR 319 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ S DP YR +E + DPIE++R LL A E +E + + Sbjct: 320 MGAHTTSDDPTRYRADDERQSWEAK-DPIERLRAHLLAEGLADEAFFASLEEESEAMGRS 378 Query: 343 SVEFAQSDKEPD 354 E ++ +PD Sbjct: 379 VREAIRAMPDPD 390 >gi|4572548|gb|AAD23875.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] Length = 135 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 75/137 (54%), Positives = 102/137 (74%), Gaps = 3/137 (2%) Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 GQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI Sbjct: 1 GQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDI 58 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQ 313 V+ A YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI Sbjct: 59 LCVREATRFAAXYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIML 118 Query: 314 VRKRLLHNKWASEGDLK 330 ++ R++++ AS +LK Sbjct: 119 LKDRMVNSNLASVEELK 135 >gi|284042215|ref|YP_003392555.1| pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] gi|283946436|gb|ADB49180.1| Pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] Length = 362 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 97/317 (30%), Positives = 164/317 (51%), Gaps = 4/317 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + + R ML +R EE+A LY G V G + GQEAV G ++ D++ Sbjct: 23 LTRTDRVDLLRAMLTMRIVEERAMSLYRQGKVPGSFYDGYGQEAVSAGAAYAMAAEDRLC 82 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +R+ + GV+ ++I+A+ GR G++ G+ G++H + + G G ++ + + Sbjct: 83 ILHRDLAAHVVRGVEPARILAQYMGRATGVTGGRDGNVHFGAAELGCVGMVSMLPDMMLV 142 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 TG+A A K R + + FGDG+ ++G +E+ N AA+ L VI+V+ENNQYA T Sbjct: 143 ATGMAMAFKLRGEARAALTFFGDGSTSRGDFHEALNWAAVQRLPVIFVLENNQYAYSTPT 202 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ++ A + +R S+ +PG+ VDG D+ A+ + +A A A GP ++E +T R G Sbjct: 203 AQQYA-VDPVERARSYGMPGVTVDGNDVEAMFEVVREARARAVAGGGPTLVEAVTMRMHG 261 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H+ D Y E++ R DPIEQ +RL + D+ + V+ ++ + E Sbjct: 262 HAAHDDMKYVPPEQLAHWR-ERDPIEQQERRL--AALSEPVDVAALRAEVQATVDAATEE 318 Query: 347 AQSDKEPDPAELYSDIL 363 A + PDPA + + Sbjct: 319 ALAAPMPDPATVLDGVF 335 >gi|295695938|ref|YP_003589176.1| 3-methyl-2-oxobutanoate dehydrogenase (2- methylpropanoyl-transferring) [Bacillus tusciae DSM 2912] gi|295411540|gb|ADG06032.1| 3-methyl-2-oxobutanoate dehydrogenase (2- methylpropanoyl-transferring) [Bacillus tusciae DSM 2912] Length = 334 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 154/312 (49%), Gaps = 5/312 (1%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITA 108 E L+ YR+ML RR +E+ L G + F C G E VG +L + D ++ Sbjct: 17 EDLLAMYRVMLTARRVDERLWVLNRAGKIP-FVISCQGHEGAQVGAAFALDRQKDYVLPY 75 Query: 109 YREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+ +LA G ++A S G+ H S K+ G V Q+ Sbjct: 76 YRDVAVVLAFGQTPRDLLLAAYAKADDPNSGGRQMPNHFGSRKHRIVSGSSPVSTQIPHA 135 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIA A K R D + V FG+G++NQG +E N AA+ L V++ +NN YA+ S Sbjct: 136 AGIALAAKMRGDDVVAYVSFGEGSSNQGDFHEGLNFAAVHRLPVVFFCQNNGYAISVPAS 195 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + A + + R + IPG+ VDG D+ V + AV R GP ++E +T R H Sbjct: 196 KELATPSVADRAAGYGIPGVVVDGSDVLGVYHAVKTAVERARRGDGPTLVEAMTVRLTPH 255 Query: 288 SM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 S D YR+ EE+ + R DP+ Q+ + L+ + A E L+ ++ VR ++ + + Sbjct: 256 SSDDDDRTYRSGEELEDAR-RRDPLPQLAEYLIASGVADEVLLRALDQEVRAEVDEATAY 314 Query: 347 AQSDKEPDPAEL 358 A+ ++PDPA++ Sbjct: 315 AEQARDPDPADV 326 >gi|258510822|ref|YP_003184256.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477548|gb|ACV57867.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 370 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 93/312 (29%), Positives = 156/312 (50%), Gaps = 11/312 (3%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + E ++ YR M+ R F+ KA L G +G + GQEA V M+L D Sbjct: 37 VDDIPPEVMVAMYRHMVFARAFDRKAIALQRQGRIGTYAPFE-GQEAAQVASAMALAPED 95 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +YR+H + G + ++ +GR GI +G + S + Sbjct: 96 FVFPSYRDHAATMVLGQSPANVLLYWSGRVEGIRSPEGRHILPPSVP---------IATH 146 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V G A+A++YR+ + + FGDGA ++G +E+ N A +++L V++ +NN YA+ Sbjct: 147 VLHAVGAAWASRYRKESAVSIAYFGDGATSEGDFHEALNFAGVFHLPVLFFCQNNGYAIS 206 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 SR SA ++R ++++I G++VDG D AV + +A + GP +IE +T+R Sbjct: 207 VPFSRQSASRTIAQRAIAYDIVGVRVDGNDAFAVYRAVKEARSRALHGLGPTLIEAVTFR 266 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ + DP YR ++ + E DPI ++R L K SE D +++ V+ + Sbjct: 267 MGAHTTADDPTRYRDQKAVVEAWQKRDPIVRLRLYLESQKLWSESDEAKLQDEVKARVEA 326 Query: 343 SVEFAQSDKEPD 354 +VE A S PD Sbjct: 327 AVEEALSIAPPD 338 >gi|30795050|ref|NP_851500.1| pyruvate dehydrogenase alpha-subunit [Streptomyces rochei] gi|30698423|dbj|BAC76536.1| probable pyruvate dehydrogenase alpha-subunit [Streptomyces rochei] Length = 326 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 92/233 (39%), Positives = 134/233 (57%), Gaps = 2/233 (0%) Query: 57 RLMLLIRRFEEKAGQLY-GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 R M+ IR EE+ +Y + HL IGQEAV VG+ +L D + + +R H H Sbjct: 8 RTMVRIRCIEEEIADVYRDEQQMRTPVHLSIGQEAVAVGVCAALRTEDVVYSGHRCHAHY 67 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G ++AEL GR+ G + G+GGS+H+ GF I+G +S+ TG A+A Sbjct: 68 LAKGGGLGAMVAELYGRETGCAAGRGGSVHLVDEAAGFGASSAILGEMISVATGAAWAFA 127 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV-SRASAQTN 234 + + ++ V FGDGA+ +G +ES N AAL L V+YV ENNQY++ + + +R T+ Sbjct: 128 RQEAPRVAVTFFGDGASEEGVFHESLNFAALHRLPVVYVCENNQYSLSSPLAARQPPGTS 187 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 S R + IP +VDG D+ AV A AV +CR+ GP +E+ TYR+R H Sbjct: 188 ISGRARGYGIPAARVDGNDVAAVHAAAVTAVEHCRSGTGPYFLELDTYRWREH 240 >gi|291438453|ref|ZP_06577843.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Streptomyces ghanaensis ATCC 14672] gi|291341348|gb|EFE68304.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Streptomyces ghanaensis ATCC 14672] Length = 412 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/327 (29%), Positives = 158/327 (48%), Gaps = 18/327 (5%) Query: 37 PFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 P++ G E YR M+L RRF+ +A L G +G + L +GQEA +G Sbjct: 74 PYVAGVTAEELR-----GLYRDMVLTRRFDAEATSLQRQGELGLWASL-LGQEAAQIGSG 127 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 +L + D + YREHG GVD + ++ G G G + H+++ Sbjct: 128 RALRDDDYVFPTYREHGVAWCRGVDPTNLLGMFRGVNNGGWDPNGNNFHLYTI------- 180 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 ++G+Q TG A +D + FGDGA++QG V E+F +A++N V++ + Sbjct: 181 --VIGSQALHATGYAMGITKDGADSAVIAYFGDGASSQGDVAEAFTFSAVYNAPVVFFCQ 238 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ+A+ + S + +R F PG++VDG D+ A A A+ RA +GP + Sbjct: 239 NNQWAISEPTEKQS-RVPLYQRAQGFGFPGVRVDGNDVLANLAVTQWALERARAGEGPTL 297 Query: 277 IEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +E TYR H+ S DP YR EE + DPI ++R+ L + A EG E+E Sbjct: 298 VEAFTYRMGAHTTSDDPTRYRGDEERLAWEAK-DPILRLRRYLESSGHADEGFFAELETE 356 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 + E ++ +PD ++ ++ Sbjct: 357 SETLGRRVREAVRAMPDPDLFAIFENV 383 >gi|239930115|ref|ZP_04687068.1| branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces ghanaensis ATCC 14672] Length = 414 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/327 (29%), Positives = 158/327 (48%), Gaps = 18/327 (5%) Query: 37 PFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 P++ G E YR M+L RRF+ +A L G +G + L +GQEA +G Sbjct: 76 PYVAGVTAEELR-----GLYRDMVLTRRFDAEATSLQRQGELGLWASL-LGQEAAQIGSG 129 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 +L + D + YREHG GVD + ++ G G G + H+++ Sbjct: 130 RALRDDDYVFPTYREHGVAWCRGVDPTNLLGMFRGVNNGGWDPNGNNFHLYTI------- 182 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 ++G+Q TG A +D + FGDGA++QG V E+F +A++N V++ + Sbjct: 183 --VIGSQALHATGYAMGITKDGADSAVIAYFGDGASSQGDVAEAFTFSAVYNAPVVFFCQ 240 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ+A+ + S + +R F PG++VDG D+ A A A+ RA +GP + Sbjct: 241 NNQWAISEPTEKQS-RVPLYQRAQGFGFPGVRVDGNDVLANLAVTQWALERARAGEGPTL 299 Query: 277 IEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +E TYR H+ S DP YR EE + DPI ++R+ L + A EG E+E Sbjct: 300 VEAFTYRMGAHTTSDDPTRYRGDEERLAWEAK-DPILRLRRYLESSGHADEGFFAELETE 358 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 + E ++ +PD ++ ++ Sbjct: 359 SETLGRRVREAVRAMPDPDLFAIFENV 385 >gi|206971161|ref|ZP_03232112.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus AH1134] gi|206733933|gb|EDZ51104.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus AH1134] Length = 333 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 103/307 (33%), Positives = 152/307 (49%), Gaps = 7/307 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ L +R MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 14 LSDEQVLEMFRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYA 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A ++M + G + G G M H KN G V Q Sbjct: 73 LPYYRDMGVVLAFGMTAKELMLSAFAKAGDPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQ 131 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 132 VPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 191 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + A N S R + + +PG +DG D AV + +A R +GP +IE ++YR Sbjct: 192 IPVEKQLACKNVSDRAIGYGMPGYTIDGNDPLAVYKAVKEAADRGRRGEGPTLIETVSYR 251 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 HS D YR +EE+ E + N D I L +E K++ + I+N Sbjct: 252 LTAHSSDDDDRVYRDKEEVEEAKKN-DSIITFAAYLKEAGVLTEESEKQMLDEIMHIVNE 310 Query: 343 SVEFAQS 349 + E+A++ Sbjct: 311 ATEYAEN 317 >gi|313676905|ref|YP_004054901.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Marivirga tractuosa DSM 4126] gi|312943603|gb|ADR22793.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Marivirga tractuosa DSM 4126] Length = 659 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 89/313 (28%), Positives = 160/313 (51%), Gaps = 2/313 (0%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 F + + +Q ++ Y+ +LL R EEK L + + IGQEA+ VG +L Sbjct: 3 FNRKKLSDKQLINLYKQILLPRMIEEKMLILLRQNKISKWFS-GIGQEAISVGSAAALEN 61 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 + ++ +R G + +++ ++ G+ G +KG+ S H + + G +G Sbjct: 62 DEYILPMHRNLGVFTTREIPLNRLFSQFQGKMQGFTKGRDRSFHFGTNEFHIVGMISHLG 121 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ + GIA ANK +K +V GDG +++G +E+ N+AA+W+L VI++IENN Y Sbjct: 122 PQLGVADGIALANKLSNENKATLVFSGDGGSSEGDFHEALNVAAVWDLPVIFMIENNGYG 181 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T S NF +G + + ++VDG +I V +D A R + PI+IE +T Sbjct: 182 LSTPSSEQFKFKNFVDKGPGYGMEAIKVDGNNILDVFHAVDTAAKKIRKNPKPILIEAMT 241 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 +R RGH + Y +E+ + + DP++ + LL K S+ ++ ++ ++ IN Sbjct: 242 FRMRGHEEASGTKY-VPQELFDKWAKKDPVDNYERFLLKEKVISQEEIDDLRAEIKANIN 300 Query: 342 NSVEFAQSDKEPD 354 ++ A D P+ Sbjct: 301 KGLKLAGEDIYPE 313 >gi|332286688|ref|YP_004418599.1| 2-oxoisovalerate dehydrogenase beta subunit [Pusillimonas sp. T7-7] gi|330430641|gb|AEC21975.1| 2-oxoisovalerate dehydrogenase beta subunit [Pusillimonas sp. T7-7] Length = 731 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 102/319 (31%), Positives = 154/319 (48%), Gaps = 29/319 (9%) Query: 42 FEVSEFNKEQELSAYRLMLLI---RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 E ++++K A RL L+ R FEE +L + +V G H +GQE G + Sbjct: 17 IEEADWDKLDAFEAKRLATLVATARHFEECILRLDKLNLVHGPAHSSLGQEGGAAGCIAA 76 Query: 99 LTEGDQMITAYREHGHILACGVDA----------------------SKIMAELTGRQGGI 136 L + +R H LA ++A ++M E+ G + G Sbjct: 77 LPVATMINGTHRAHHQCLAKAINALYGDDFDPAATGRLSESMREETRRMMHEILGLRDGW 136 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 + G+GGSMH+ + G G + IV + + G AFA K R+ + V FGDGA +QG Sbjct: 137 TGGRGGSMHLRRAELGIMGTNAIVAGGLPIACGHAFAEKARQGSSMMVSFFGDGAVHQGA 196 Query: 197 VYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA 256 +E+ N+AAL+ L +++ +ENN+YA+ S+ +++ QT R + IP + VDGM+ A Sbjct: 197 THEAMNLAALYRLPLLFFLENNRYAVSMSIEQSTFQTQLLTRAQAHGIPSVCVDGMNPFA 256 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQ 313 V A + GP I+ YRY S S P + YRTR+E NE R DP Q Sbjct: 257 VWLASRWAQEHMHVEGGPAFIQADVYRYYHQSSSVPGSAFGYRTRDEENEWR-ERDPWPQ 315 Query: 314 VRKRLLHNKWASEGDLKEI 332 +R+ L+ E DL I Sbjct: 316 LRRELIARNILDEADLDVI 334 >gi|229543916|ref|ZP_04432975.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Bacillus coagulans 36D1] gi|229325055|gb|EEN90731.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Bacillus coagulans 36D1] Length = 329 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 101/306 (33%), Positives = 149/306 (48%), Gaps = 20/306 (6%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 L Y +MLL R+ +E+ L G + F C GQEA VG +L D ++ YR+ Sbjct: 17 LEMYEMMLLARKVDERMWLLNRSGKIP-FVVSCQGQEAAQVGAAFALDRTKDYVLPYYRD 75 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGAQVSLGT 168 G +LA G+ A IM L+G GG H KN V QV Sbjct: 76 LGIVLAFGMTARDIM--LSGFAKAEDPNSGGRQMPGHYGQKKNRIVTQSSPVTTQVPHAA 133 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 GIA A K + D + V FG+G++NQG +E N AA+ L VI++ ENNQYA+ + + Sbjct: 134 GIALAGKMEKKDFVTFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNQYAISVPIEK 193 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 S R + + +PG+ VDG D AV + +A R +GP +IE L YR+ HS Sbjct: 194 QLGNPRVSDRAIGYGMPGVTVDGNDPLAVYEVVKEAADRARRGEGPTLIETLVYRFTPHS 253 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL------KEIEMNVRKIINN 342 D YR +EE+ + DP+ +L +++ E L KEI+ V + +N Sbjct: 254 SDDDDRYRAQEEVKTAKEK-DPV------VLFSRYLKEAGLLDGEKEKEIDARVIQTVNE 306 Query: 343 SVEFAQ 348 + ++A+ Sbjct: 307 ATDYAE 312 >gi|302543903|ref|ZP_07296245.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces hygroscopicus ATCC 53653] gi|302461521|gb|EFL24614.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces himastatinicus ATCC 53653] Length = 387 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 93/305 (30%), Positives = 150/305 (49%), Gaps = 13/305 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L RRF+ +A L G +G + L +GQEA +G +L + D + YREHG Sbjct: 63 YRDMVLTRRFDAEATTLQRQGELGLWASL-LGQEAAQIGSGRALHDDDYVFPTYREHGVA 121 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GVD + ++ G G + H+++ ++G+Q TG A Sbjct: 122 WCRGVDPTNLLGMFRGVNHGGWDPNSNNFHLYTI---------VIGSQTLHATGYAMGVA 172 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +D + FGDGA++QG V ESF +A++N V++ +NNQ+A+ + + + Sbjct: 173 KDGADSAVLAYFGDGASSQGDVAESFTYSAVYNAPVVFFCQNNQWAISEPTEKQT-RVPL 231 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 +R + PG++VDG D+ A A A+ R +GP+++E TYR H+ S DP Sbjct: 232 YQRAQGYGFPGVRVDGNDVLACLAVTKAALERARTGQGPMLVEAFTYRMGAHTTSDDPTR 291 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR+ EE E+ DPI ++R L + K A + +E + E +S +PD Sbjct: 292 YRSSEE-RELWETKDPILRLRTLLTNEKLADDAFFDALEQESDALAKRVREAVRSMPDPD 350 Query: 355 PAELY 359 L+ Sbjct: 351 DMALF 355 >gi|257386740|ref|YP_003176513.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Halomicrobium mukohataei DSM 12286] gi|257169047|gb|ACV46806.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Halomicrobium mukohataei DSM 12286] Length = 371 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 90/328 (27%), Positives = 162/328 (49%), Gaps = 16/328 (4%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 +G V + E+ ++ YR M L R F+++A L G +G + + GQE V +L Sbjct: 26 DGATVPDLADEELVAIYREMKLARHFDQRAVSLQRQGRMGTYPPMA-GQEGAQVASAHAL 84 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 ++GD + +YREH + A G +I+ G + G G + + Sbjct: 85 SDGDWVFPSYREHAALHAHGWPLDQILLYWMGSEAGSDPPDGVAAFTLAVP--------- 135 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + Q+ TG ++A K R D++ + FGDGA ++G +E N A +++ ++ NNQ Sbjct: 136 IATQIPHATGASWAAKLRGQDEVHLAYFGDGATSEGDFHEGLNFAGVFDTPTVFFCNNNQ 195 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG----PI 275 +A+ R +A +++ ++ G+QVDGMD AV +AV R G P Sbjct: 196 WAISVPRERQTASATLAQKASAYGFEGIQVDGMDPLAVYQVTSEAVEKARDPAGEDPRPT 255 Query: 276 IIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 +IE + YR+ H+ + DP+ YR+ EE+ R DPI ++ L + ++ IE Sbjct: 256 MIEAVQYRFGAHTTADDPSVYRSDEEVERWRRK-DPIPRMEAFLRDRGLLDDESVEAIES 314 Query: 335 NVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++ + +++E A+S + P P E+++ + Sbjct: 315 SIADEVADAIETAESYERPAPEEMFAHV 342 >gi|302559598|ref|ZP_07311940.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces griseoflavus Tu4000] gi|302477216|gb|EFL40309.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces griseoflavus Tu4000] Length = 401 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 99/326 (30%), Positives = 159/326 (48%), Gaps = 20/326 (6%) Query: 45 SEFNK-------EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 +EF+K E+ YR M+L RRF+ +A L G +G + L +GQEA +G Sbjct: 59 AEFDKYVDGITAEELRGLYRDMVLTRRFDAEATALQRQGELGLWASL-LGQEAAQIGSGR 117 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +L + D + YREHG GVD + ++ G G G + H+++ Sbjct: 118 ALRDDDYVFPTYREHGVAWCRGVDPTNLLGMFRGVNNGGWDPNGNNFHLYTI-------- 169 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 ++G+Q TG A +D + FGDGA++QG V E+F +A++N V++ +N Sbjct: 170 -VIGSQTLHATGYAMGITKDGADSAVIAYFGDGASSQGDVAEAFTFSAVYNAPVVFFCQN 228 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 NQ+A+ + S + +R F PG++VDG D+ A A A+ RA +GP ++ Sbjct: 229 NQWAISEPTEKQS-RVPLYQRAQGFGFPGVRVDGNDVLANLAVTKWALERARAGEGPTLV 287 Query: 278 EMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E TYR H+ S DP YR EE + DPI ++R+ L A EG E+E Sbjct: 288 EAFTYRMGAHTTSDDPTRYRGDEERLAWEAK-DPILRLRRYLEAANHADEGFFAELETES 346 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDI 362 + E ++ +PD ++ ++ Sbjct: 347 ETLGKRVREAVRAMPDPDHFAIFENV 372 >gi|30264237|ref|NP_846614.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. Ames] gi|47529679|ref|YP_021028.1| 3-methyl-2-oxobutanoate dehydrogenase subunit alpha [Bacillus anthracis str. 'Ames Ancestor'] gi|49187065|ref|YP_030317.1| 3-methyl-2-oxobutanoate dehydrogenase subunit alpha [Bacillus anthracis str. Sterne] gi|49481564|ref|YP_038224.1| 3-methyl-2-oxobutanoate dehydrogenase subunit alpha (2-oxoisovalerate dehydrogenase subunit alpha) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141334|ref|YP_085494.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit (2-oxoisovalerate dehydrogenase, alpha subunit) [Bacillus cereus E33L] gi|65321548|ref|ZP_00394507.1| COG1071: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Bacillus anthracis str. A2012] gi|118479355|ref|YP_896506.1| branched-chain alpha-keto acid dehydrogenase E1 component [Bacillus thuringiensis str. Al Hakam] gi|165873120|ref|ZP_02217737.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. A0488] gi|167641903|ref|ZP_02400141.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. A0193] gi|170709210|ref|ZP_02899633.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. A0389] gi|177654783|ref|ZP_02936540.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. A0174] gi|190566163|ref|ZP_03019082.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis Tsiankovskii-I] gi|196035054|ref|ZP_03102461.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus W] gi|196041540|ref|ZP_03108832.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus NVH0597-99] gi|196046278|ref|ZP_03113504.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus 03BB108] gi|206976267|ref|ZP_03237175.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus H3081.97] gi|217961652|ref|YP_002340222.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus AH187] gi|218905298|ref|YP_002453132.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus AH820] gi|222097609|ref|YP_002531666.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit (2-oxoisovalerate dehydrogenase, alpha subunit) [Bacillus cereus Q1] gi|225866144|ref|YP_002751522.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus 03BB102] gi|227816938|ref|YP_002816947.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. CDC 684] gi|228916798|ref|ZP_04080363.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929208|ref|ZP_04092235.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228947878|ref|ZP_04110165.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228987354|ref|ZP_04147474.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229093221|ref|ZP_04224339.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock3-42] gi|229123682|ref|ZP_04252877.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus 95/8201] gi|229140896|ref|ZP_04269441.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus BDRD-ST26] gi|229186405|ref|ZP_04313569.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus BGSC 6E1] gi|229198290|ref|ZP_04324997.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus m1293] gi|229604476|ref|YP_002868456.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. A0248] gi|254721761|ref|ZP_05183550.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. A1055] gi|254736274|ref|ZP_05193980.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. Western North America USA6153] gi|254754054|ref|ZP_05206089.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. Vollum] gi|254757925|ref|ZP_05209952.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. Australia 94] gi|301055654|ref|YP_003793865.1| 3-methyl-2-oxobutanoate dehydrogenase subunit alpha [Bacillus anthracis CI] gi|30258882|gb|AAP28100.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. Ames] gi|47504827|gb|AAT33503.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49180992|gb|AAT56368.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. Sterne] gi|49333120|gb|AAT63766.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit (2-oxoisovalerate dehydrogenase, alpha subunit) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974803|gb|AAU16353.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit (2-oxoisovalerate dehydrogenase, alpha subunit) [Bacillus cereus E33L] gi|118418580|gb|ABK86999.1| branched-chain alpha-keto acid dehydrogenase E1 component [Bacillus thuringiensis str. Al Hakam] gi|164711134|gb|EDR16694.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. A0488] gi|167510146|gb|EDR85554.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. A0193] gi|170125872|gb|EDS94776.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. A0389] gi|172080444|gb|EDT65530.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. A0174] gi|190563082|gb|EDV17048.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis Tsiankovskii-I] gi|195992593|gb|EDX56554.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus W] gi|196022748|gb|EDX61429.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus 03BB108] gi|196027528|gb|EDX66143.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus NVH0597-99] gi|206745463|gb|EDZ56862.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus H3081.97] gi|217065970|gb|ACJ80220.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus AH187] gi|218538220|gb|ACK90618.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus AH820] gi|221241667|gb|ACM14377.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit (2-oxoisovalerate dehydrogenase, alpha subunit) [Bacillus cereus Q1] gi|225789506|gb|ACO29723.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus 03BB102] gi|227003755|gb|ACP13498.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. CDC 684] gi|228585169|gb|EEK43280.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus m1293] gi|228597032|gb|EEK54688.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus BGSC 6E1] gi|228642686|gb|EEK98972.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus BDRD-ST26] gi|228659817|gb|EEL15462.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus 95/8201] gi|228690195|gb|EEL43989.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock3-42] gi|228772326|gb|EEM20772.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228811865|gb|EEM58199.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228830498|gb|EEM76108.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842985|gb|EEM88068.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229268884|gb|ACQ50521.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. A0248] gi|300377823|gb|ADK06727.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus biovar anthracis str. CI] gi|324328069|gb|ADY23329.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus thuringiensis serovar finitimus YBT-020] Length = 333 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 104/307 (33%), Positives = 152/307 (49%), Gaps = 7/307 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ L +R MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 14 LSDEQVLEMFRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYA 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A ++M + G + G G M H KN G V Q Sbjct: 73 LPYYRDMGVVLAFGMTAKELMLSGFAKAGDPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQ 131 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 132 VPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 191 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + A N S R + + +PG VDG D AV + +A R +GP +IE ++YR Sbjct: 192 IPVEKQLACKNVSDRAIGYGMPGYTVDGNDPLAVYKAVKEAADRGRRGEGPTLIETVSYR 251 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 HS D YR +EE+ E + N D I L +E K++ + I+N Sbjct: 252 LTAHSSDDDDRVYRDKEEVEEAKKN-DSIVTFAAYLKEVGVLTEESEKQMLDEIMHIVNE 310 Query: 343 SVEFAQS 349 + E+A++ Sbjct: 311 ATEYAEN 317 >gi|312903400|ref|ZP_07762580.1| dehydrogenase E1 component [Enterococcus faecalis TX0635] gi|310633276|gb|EFQ16559.1| dehydrogenase E1 component [Enterococcus faecalis TX0635] Length = 315 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 93/313 (29%), Positives = 159/313 (50%), Gaps = 5/313 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMITAYRE 111 + AYR +L RR +E+ QL +G F G E V M M+ + D + YR+ Sbjct: 2 IQAYRQVLRGRRLDERLWQLTRIGKTS-FNISGQGAEVAQVAMAMAFDPQKDYFLPYYRD 60 Query: 112 HGHILACGVDASKIMAELTGRQGGISK-GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 L G+ + I+ G++ S G+ H S ++ V Q+ L TG+ Sbjct: 61 MTACLVWGMTSKDILMGSFGKEADPSSHGRQMPNHYGSKEHNIVSFSSTVSTQMPLATGV 120 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 +A + +++D + + G+G+ANQG+V E+ N A + L VI+V+ENN+YA+ + Sbjct: 121 GYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVENNEYAISVPIEEQY 180 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A + R ++ G+ VDG D V +AV R KGP +IE++ R HS Sbjct: 181 ANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKLIELMVSRLTSHSAD 240 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + YR++EEI EM+ N D ++ K+LL + ++ D+ +I+ +R IN + + A++ Sbjct: 241 DDQSVYRSKEEIEEMKKN-DAVKLFEKQLLEEGYLTDEDIAKIDEEIRAEINQATDEAEA 299 Query: 350 DKEPDPAELYSDI 362 +P P + ++ Sbjct: 300 MPDPVPTSILEEV 312 >gi|138895559|ref|YP_001126012.1| pyruvate decarboxylase subunit alpha-like protein [Geobacillus thermodenitrificans NG80-2] gi|196249674|ref|ZP_03148371.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. G11MC16] gi|134267072|gb|ABO67267.1| Pyruvate decarboxylase alpha subunit-like protein [Geobacillus thermodenitrificans NG80-2] gi|196210968|gb|EDY05730.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. G11MC16] Length = 356 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 92/317 (29%), Positives = 158/317 (49%), Gaps = 15/317 (4%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE + YR ++ R F+ K L G +G + GQEA VG ++L + D M Sbjct: 27 TKELTMVMYRHLIRTRTFDRKCVSLQRQGRIGTYVPYE-GQEACQVGSALALNDEDWMFP 85 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+HG ++ G + GR G +G + S + Q+ Sbjct: 86 TYRDHGAMMTFGRSLVNTLLYWKGRTEGCVPPEGKKIVPPSVP---------IATQLPHA 136 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A A K++ + +V FGDGA ++G +E N A+++N V++ +NNQYA+ ++ Sbjct: 137 AGAACAEKWKGTKNAVIVYFGDGATSEGDFHEGLNFASVFNAPVVFFNQNNQYAISVPIT 196 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R +++ ++++IPG+++DG D+ AV +A+ R GP +IE +T+RY H Sbjct: 197 RQMRSKTIAQKALAYDIPGVRIDGNDVFAVYFQTAEALERARHGGGPTLIEAVTWRYGAH 256 Query: 288 SMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + S DP+ YR +EE + R DPI++V + + W +E + V++ +N +E Sbjct: 257 TTSDDPSRYRDQEESKKRRETTDPIKRVVRLMQREGWWNE----QWANQVQEEVNAEIEQ 312 Query: 347 AQSDKEPDPAELYSDIL 363 A ++ E P SD+ Sbjct: 313 AVAEMERYPKANASDMF 329 >gi|228935483|ref|ZP_04098301.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824235|gb|EEM70049.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 333 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 104/307 (33%), Positives = 152/307 (49%), Gaps = 7/307 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ L +R MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 14 LSDEQVLEMFRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYA 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A ++M + G + G G M H KN G V Q Sbjct: 73 LPYYRDMGVVLAFGMTAKELMLSGFAKAGDPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQ 131 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 132 VPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 191 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + A N S R + + +PG VDG D AV + +A R +GP +IE ++YR Sbjct: 192 IPVEKQLACKNVSDRAIGYGMPGYTVDGNDPLAVYKAVKEAADRGRRGEGPTLIETVSYR 251 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 HS D YR +EE+ E + N D I L +E K++ + I+N Sbjct: 252 LTAHSSDDDDRVYRDKEEVEEAKKN-DSIVTFAAYLKKVGVLTEESEKQMLDEIMHIVNE 310 Query: 343 SVEFAQS 349 + E+A++ Sbjct: 311 ATEYAEN 317 >gi|297158851|gb|ADI08563.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces bingchenggensis BCW-1] Length = 384 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 105/349 (30%), Positives = 165/349 (47%), Gaps = 19/349 (5%) Query: 21 VSAKRAATSSVDCVDI--PFLEGFEVSEFNKE---QELSA-YRLMLLIRRFEEKAGQLYG 74 SAKR + V + P E E E++ + EL A YR M+L RRF+ +A L Sbjct: 19 TSAKRRTADQPELVQLLTPEGERVEHPEYSLDPTPDELRAMYRDMVLTRRFDGEATTLQR 78 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G +G + L +GQEA +G +L + D + YREHG GVD ++ G Sbjct: 79 QGELGLWASL-LGQEAAQIGSGRALQDDDYVFPTYREHGVAWCRGVDPVNLLGMFRGVNH 137 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G + H+++ ++G+Q TG A +D + FGDGA++Q Sbjct: 138 GGWDPNSNNFHLYTI---------VIGSQTLHATGYAMGVAKDGADSAVLAYFGDGASSQ 188 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G V E+F AA++N V++ +NNQ+A+ R + + +R + PG++VDG D+ Sbjct: 189 GDVAEAFTFAAVYNAPVVFFCQNNQWAISEPTERQT-RVPLYQRAQGYGFPGVRVDGNDV 247 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQ 313 A A A+ R +GP++IE TYR H+ S DP YR EE E+ DPI + Sbjct: 248 LACLAVTKAALERARTGQGPMLIEAFTYRMGAHTTSDDPTRYRRAEE-RELWETKDPISR 306 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +R L A + ++E + + ++ +PD L+ I Sbjct: 307 LRTYLTAQGLADDAFFADLEKESDALAKRVRDSVRAMPDPDDMALFEHI 355 >gi|229157743|ref|ZP_04285818.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus ATCC 4342] gi|228625700|gb|EEK82452.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus ATCC 4342] Length = 333 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 104/307 (33%), Positives = 152/307 (49%), Gaps = 7/307 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ L +R MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 14 LSDEQVLEMFRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALNREKDYA 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A ++M + G + G G M H KN G V Q Sbjct: 73 LPYYRDMGVVLAFGMTAKELMLSGFAKAGDPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQ 131 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 132 VPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 191 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + A N S R + + +PG VDG D AV + +A R +GP +IE ++YR Sbjct: 192 IPVEKQLACKNVSDRAIGYGMPGYTVDGNDPLAVYKAVKEAADRGRRGEGPTLIETVSYR 251 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 HS D YR +EE+ E + N D I L +E K++ + I+N Sbjct: 252 LTAHSSDDDDRVYRDKEEVEEAKKN-DSIITFAAYLKEVGVLTEESEKQMLDEIMHIVNE 310 Query: 343 SVEFAQS 349 + E+A++ Sbjct: 311 ATEYAEN 317 >gi|42783280|ref|NP_980527.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus ATCC 10987] gi|47569679|ref|ZP_00240354.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Bacillus cereus G9241] gi|42739208|gb|AAS43135.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus ATCC 10987] gi|47553647|gb|EAL12023.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Bacillus cereus G9241] Length = 333 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 104/307 (33%), Positives = 152/307 (49%), Gaps = 7/307 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ L +R MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 14 LSDEQVLEMFRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYA 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A ++M + G + G G M H KN G V Q Sbjct: 73 LPYYRDMGVVLAFGMTAKELMLSGFAKAGDPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQ 131 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 132 VPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 191 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + A N S R + + +PG VDG D AV + +A R +GP +IE ++YR Sbjct: 192 IPVEKQLACKNVSDRAIGYGMPGYTVDGNDPLAVYKAVKEAADRGRRGEGPTLIETVSYR 251 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 HS D YR +EE+ E + N D I L +E K++ + I+N Sbjct: 252 LTAHSSDDDDRVYRDKEEVEEAKKN-DSIITFAAYLKEVGVLTEESEKQMLDEIMHIVNE 310 Query: 343 SVEFAQS 349 + E+A++ Sbjct: 311 ATEYAEN 317 >gi|37526685|ref|NP_930029.1| hypothetical protein plu2795 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786117|emb|CAE15169.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 650 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 94/262 (35%), Positives = 143/262 (54%), Gaps = 8/262 (3%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R LLIR EE +LY G + G H CIGQE + L + D + + +R HGH L Sbjct: 7 RTSLLIRETEEALLRLYSTGELHGTVHTCIGQELTGAIVCKFLKKNDWVFSNHRCHGHFL 66 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 + D + ++AE+ G++ G+ G+GGS H+ K GF+ +GI G + + TG AFA K Sbjct: 67 SRTGDVTGLIAEVMGKETGVCGGRGGSQHL--CKEGFFS-NGIQGGILPVATGAAFAKKL 123 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R + I + GDG +G VYE NIAA W+L ++ V+ENNQYA T +S + + S Sbjct: 124 RHDNSISIAFIGDGTLGEGVVYEVLNIAAKWDLPLLIVLENNQYAQSTHISE-TLSGSIS 182 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 KR +F + + D + + A ++ + Y R + P +++ TYR + HS D + R Sbjct: 183 KRAQAFGMRYTKSDVWNWEHLIAETEELINYTRNQRHPAFLQIDTYRLKAHSKGD--DLR 240 Query: 297 TREEINEMRSNHDPIEQV-RKR 317 +EI E + DPI + R+R Sbjct: 241 NIDEI-EHFNTIDPINVILRER 261 >gi|295680752|ref|YP_003609326.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Burkholderia sp. CCGE1002] gi|295440647|gb|ADG19815.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Burkholderia sp. CCGE1002] Length = 371 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 98/322 (30%), Positives = 162/322 (50%), Gaps = 14/322 (4%) Query: 44 VSEFNKEQE--LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 + F +E E +S YR M+L R F+ KA L G +G F +GQEA+ VG+ ++ Sbjct: 25 LPAFAREPEALISLYRAMVLTRAFDTKAVALQRTGKLGTFAS-SVGQEAIGVGVASAMQA 83 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D + +YR+H L GV M E GG +G S+ F N +G Sbjct: 84 DDVLFPSYRDHAAQLLRGV----TMTESLLYWGGDERGSDFSVPRFDFPNCV-----PIG 134 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 QV G A+A K R ++ V GDG+ ++G YE+ N+A +W ++ V+ NNQ+A Sbjct: 135 TQVCHAAGAAYAFKLRGEPRVAVAICGDGSTSKGDFYEAMNMAGVWQTPLVLVVNNNQWA 194 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + S SA +++ ++ I G+QVDG D+ AV M A+A R GP +IE L+ Sbjct: 195 ISVPRSTQSAAQTLAQKAIAAGIDGLQVDGNDVIAVHQVMHAALAKARRGDGPTLIEALS 254 Query: 282 YRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YR H+ +D A YR +EI + + ++P+ ++RK L+ + + +++ + Sbjct: 255 YRLGDHTTADDATRYRDSDEIQK-QWEYEPLLRLRKYLMRMNFWDKAQDEQLGRACHAQV 313 Query: 341 NNSVEFAQSDKEPDPAELYSDI 362 +VE + PD + ++ + Sbjct: 314 EAAVEAYLAVPPPDTSAMFDHL 335 >gi|73538801|ref|YP_299168.1| pyruvate dehydrogenase (lipoamide) [Ralstonia eutropha JMP134] gi|72122138|gb|AAZ64324.1| Pyruvate dehydrogenase (lipoamide) [Ralstonia eutropha JMP134] Length = 366 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 91/307 (29%), Positives = 156/307 (50%), Gaps = 10/307 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M+L R+F+ KA + G +G F +GQEAV VG+ ++ D ++ +YR+H Sbjct: 39 LPLYRAMVLTRQFDLKAIAMQRTGKIGTFAS-ALGQEAVGVGVASAMRPEDILVPSYRDH 97 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GV M E GG +G G F+ +G + +G QV G+A+ Sbjct: 98 AAQFVRGV----TMTESLLYWGGDERGSG-----FAAAPHDFGNNVPIGTQVCHAAGVAY 148 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + R ++ V GDG ++G YE N+A W+ ++ V+ NNQ+A+ SR +A Sbjct: 149 AVQLRGEPRVAVCMLGDGGTSKGDFYEGMNMAGAWHAPLVIVVNNNQWAISMPRSRQTAA 208 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ IPG Q+DG D+ AV+ + +A+ RA +GP +IE +TYR H+ +D Sbjct: 209 HTLAQKAIAAGIPGEQIDGNDVVAVRHRVGEAIERARAGEGPSLIEAITYRLGDHTTADD 268 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 A+ E + +P+ ++R+ L+ G + + + + +VE + Sbjct: 269 ASRYRDESTVKAHWQAEPLLRLREHLVKLGAWDAGREEALVRECSQQVAQAVEAYLALPP 328 Query: 353 PDPAELY 359 PDPA ++ Sbjct: 329 PDPAAMF 335 >gi|302520558|ref|ZP_07272900.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sp. SPB78] gi|302429453|gb|EFL01269.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sp. SPB78] Length = 420 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 13/300 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L RRF+ +A L G +G + L +GQEA +G +L D + YREHG Sbjct: 94 YRDMVLTRRFDAEATSLQRQGELGLWPSL-LGQEAAQIGSGRALRPDDYVFPTYREHGVA 152 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GVD + ++ G G + H+++ ++G+Q TG A Sbjct: 153 WCRGVDPTLLLGMFRGVNNGGWDPTSNNFHLYTI---------VIGSQALHATGYAMGIG 203 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +D V FGDGA++QG V E+F +A++N ++ +NNQ+A+ R + + Sbjct: 204 LDGADSAVVAYFGDGASSQGDVAEAFTFSAVYNAPTLFFCQNNQWAISEPTERQT-RVPL 262 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 +R + PG++VDG D+ AV A A+A+ R+ +GP+++E TYR H+ S DP Sbjct: 263 YQRARGYGFPGVRVDGNDVLAVLAVTRAALAHIRSGQGPMLVEAFTYRMGAHTTSDDPTR 322 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR +E + DPIE++R LL A E +E + + E ++ +PD Sbjct: 323 YRADDERQAWEAK-DPIERLRAHLLAEGLADEAFFASLEEESEAMGRSVREAIRAMPDPD 381 >gi|239983197|ref|ZP_04705721.1| pyruvate dehydrogenase alpha-subunit [Streptomyces albus J1074] Length = 314 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 90/249 (36%), Positives = 132/249 (53%), Gaps = 5/249 (2%) Query: 59 MLLIRRFEEKAGQLY-GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 M+ IR EE+ Y + H IGQEA VG+ + T D + T++R H LA Sbjct: 1 MVRIRVVEERLADHYRDEQEIRTPVHFSIGQEATAVGVCTATTPRDWVYTSHRSHAPYLA 60 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 G D ++AEL GRQ G + G+GGSMH+ + GF G I+G +S+ G A+ R Sbjct: 61 KGGDLRALVAELYGRQEGCAHGRGGSMHLIDQQAGFAGSAAILGEMISVAVGTAWEFARR 120 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV-SRASAQTNFS 236 ++ + FGDGA +G ES N AA+ + V++V ENN Y+ + + +R A T Sbjct: 121 GEARVALTYFGDGATEEGVFAESLNFAAVHRVPVVFVCENNLYSNCSPLAARQPAGTTIR 180 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH---SMSDPA 293 R + + QVDG D+ AV +AV R +GP+++E+ TYR+R H Sbjct: 181 GRAEAAGVRAEQVDGNDVFAVHEAALRAVRQAREGRGPVLLELATYRWREHVGPGWDHAY 240 Query: 294 NYRTREEIN 302 YR+REEI+ Sbjct: 241 GYRSREEID 249 >gi|318062552|ref|ZP_07981273.1| E1-alpha branched-chain alpha keto acid dehydrogenase system [Streptomyces sp. SA3_actG] gi|318080924|ref|ZP_07988256.1| E1-alpha branched-chain alpha keto acid dehydrogenase system [Streptomyces sp. SA3_actF] Length = 420 Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 13/300 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L RRF+ +A L G +G + L +GQEA +G +L D + YREHG Sbjct: 94 YRDMVLTRRFDAEATSLQRQGELGLWPSL-LGQEAAQIGSGRALRPDDYVFPTYREHGVA 152 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GVD + ++ G G + H+++ ++G+Q TG A Sbjct: 153 WCRGVDPTLLLGMFRGVNNGGWDPTSNNFHLYTI---------VIGSQALHATGYAMGIG 203 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +D V FGDGA++QG V E+F +A++N ++ +NNQ+A+ R + + Sbjct: 204 LDGADSAVVAYFGDGASSQGDVAEAFTFSAVYNAPTLFFCQNNQWAISEPTERQT-RVPL 262 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 +R + PG++VDG D+ AV A A+A+ R+ +GP+++E TYR H+ S DP Sbjct: 263 YQRARGYGFPGVRVDGNDVLAVLAVTRAALAHIRSGQGPMLVEAFTYRMGAHTTSDDPTR 322 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR +E + DPIE++R LL A E +E + + E ++ +PD Sbjct: 323 YRADDERQAWEAK-DPIERLRAHLLAEGLADEAFFASLEEESEAMGRSVREAIRAMPDPD 381 >gi|4572530|gb|AAD23857.1| pyruvate dehydrogenase E1 alpha subunit [Homo sapiens] Length = 135 Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 74/137 (54%), Positives = 102/137 (74%), Gaps = 3/137 (2%) Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 GQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG F IPG++VDGMDI Sbjct: 1 GQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG-DF-IPGLRVDGMDI 58 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQ 313 V+ A AYCR+ KGPI++E+ TYRY GHSMSDP + RTRE+I E+RS DPI Sbjct: 59 LCVREATRFAAAYCRSGKGPILLELQTYRYHGHSMSDPGVSSRTREDIQEVRSKSDPIML 118 Query: 314 VRKRLLHNKWASEGDLK 330 ++ R++++ AS +LK Sbjct: 119 LKDRMVNSNLASVEELK 135 >gi|294630401|ref|ZP_06708961.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptomyces sp. e14] gi|292833734|gb|EFF92083.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptomyces sp. e14] Length = 407 Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 147/300 (49%), Gaps = 13/300 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L RRF+ +A L G +G + L +GQEA +G + E D + YREHG Sbjct: 84 YRDMVLTRRFDAEATALQRQGELGLWASL-LGQEAAQIGSGRATREDDYVFPTYREHGVA 142 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GVD + ++ G G G + H+++ ++G+Q TG A Sbjct: 143 WCRGVDPTNLLGMFRGVNNGGWDPNGNNFHLYTI---------VIGSQTLHATGYAMGIA 193 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +D + FGDGA++QG V ESF +A++N V++ +NNQ+A+ + + + Sbjct: 194 KDGADSAVIAYFGDGASSQGDVAESFTFSAVYNAPVVFFCQNNQWAISEPTEKQT-RVPL 252 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 +R F PG++VDG D+ A A A+ RA +GP ++E TYR H+ S DP Sbjct: 253 YQRAQGFGFPGVRVDGNDVLACLAVTRWALERARAGEGPTLVEAYTYRMGAHTTSDDPTR 312 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR EE + DPI ++R+ L A EG E+E + E ++ +PD Sbjct: 313 YRGDEERLAWEAK-DPILRLRRHLEAANHADEGFFAELETESEALGRRVREAVRAMPDPD 371 >gi|333025666|ref|ZP_08453730.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces sp. Tu6071] gi|332745518|gb|EGJ75959.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces sp. Tu6071] Length = 420 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 13/300 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L RRF+ +A L G +G + L +GQEA +G +L D + YREHG Sbjct: 94 YRDMVLTRRFDAEATSLQRQGELGLWPSL-LGQEAAQIGSGRALRPDDYVFPTYREHGVA 152 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GVD + ++ G G + H+++ ++G+Q TG A Sbjct: 153 WCRGVDPTLLLGMFRGVNNGGWDPTSNNFHLYTI---------VIGSQALHATGYAMGIG 203 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +D V FGDGA++QG V E+F +A++N ++ +NNQ+A+ R + + Sbjct: 204 LDGADSAVVAYFGDGASSQGDVAEAFTFSAVYNAPTLFFCQNNQWAISEPTERQT-RVPL 262 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 +R + PG++VDG D+ AV A A+A+ R+ +GP+++E TYR H+ S DP Sbjct: 263 YQRARGYGFPGVRVDGNDVLAVLAVTRAALAHIRSGQGPMLVEAFTYRMGAHTTSDDPTR 322 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR +E + DPIE++R LL A E +E + + E ++ +PD Sbjct: 323 YRADDERQAWEAK-DPIERLRAHLLAEGLADEAFFASLEEESEAMGRSVREAIRAMPDPD 381 >gi|311897255|dbj|BAJ29663.1| putative branched-chain alpha keto acid dehydrogenase E1 component alpha subunit [Kitasatospora setae KM-6054] Length = 385 Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 99/331 (29%), Positives = 156/331 (47%), Gaps = 17/331 (5%) Query: 37 PFLEGFEVSEF----NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVI 92 P E E EF E+ S YR ++L+RRF+ +A L G +G + L +GQEA Sbjct: 39 PEGERVEHPEFPLTVTPEELRSLYRDLVLVRRFDAEATSLQRQGELGLWASL-LGQEAAQ 97 Query: 93 VGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG 152 VG ++ GD YREHG VD ++ G G + H+++ Sbjct: 98 VGSGRAMRAGDYAFPTYREHGVAWCRDVDPLNLLGMFRGVNNGGWDPNEKNFHLYTI--- 154 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 ++GAQ TG A +D + FGDGA++QG V E+F A+++N V+ Sbjct: 155 ------VIGAQTLHATGYAMGIAKDGADDAVIAYFGDGASSQGDVNEAFTFASVYNSPVV 208 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 + +NNQ+A+ + + +R F PG++VDG D+ AV A A+ + R + Sbjct: 209 FFCQNNQWAISEPTA-VQTRIPLYRRASGFGFPGVRVDGNDVLAVLAVTRWALDHARTGQ 267 Query: 273 GPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 GP+++E TYR H+ S DP YR EE ++ DPI +++ L A E Sbjct: 268 GPVLVEAFTYRMGAHTTSDDPTRYRQSEETESWKAK-DPILRLKAHLEKEGLADEAFFAA 326 Query: 332 IEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +E + E +S +PDP ++ + Sbjct: 327 VEAESETLGLRVREGVRSMPDPDPTLIFDHV 357 >gi|149277475|ref|ZP_01883616.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Pedobacter sp. BAL39] gi|149231708|gb|EDM37086.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Pedobacter sp. BAL39] Length = 658 Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 90/301 (29%), Positives = 153/301 (50%), Gaps = 2/301 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ YR +L R EEK L G +G + IGQEA+ VG M++ + ++ +R Sbjct: 14 LNLYRQLLYPRMIEEKMLILLRQGRIGKWFS-GIGQEAIAVGSTMAMLPSEYILPMHRNL 72 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G + + K+MA+ G+ G +KG+ S H + + G +G Q++L GIA Sbjct: 73 GVFTSRNIPLRKLMAQWQGKITGFTKGRDRSFHFGTQAHKIIGMISHLGPQMALADGIAL 132 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+ + + +V G+GA ++G +E+ N+AA+W+L VI++IENN Y + T + Sbjct: 133 ADLLQNRQQATLVFTGEGATSEGDFHEAINVAAVWDLPVIFLIENNGYGLSTPTAEQYKC 192 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + + + + I G+Q+DG +I V T+ R P+++E LT+R RGH + Sbjct: 193 KDLVDKAIGYGIEGIQIDGNNILEVYDTLSDISTRIRKDPKPVLVECLTFRMRGHEEASG 252 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 Y +E+ E S DP++ + LL + + +I+ + I+ VE A D E Sbjct: 253 TKY-VPQELFEQWSVKDPVKNFEQYLLDQGVLNTAVIGDIKAAFKYEIDREVEKAFHDDE 311 Query: 353 P 353 P Sbjct: 312 P 312 >gi|149181878|ref|ZP_01860367.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus sp. SG-1] gi|148850417|gb|EDL64578.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus sp. SG-1] Length = 332 Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 100/314 (31%), Positives = 155/314 (49%), Gaps = 9/314 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQM 105 + E+ L Y ML+ RR +E+ L G + F C GQEA +G +L TE D + Sbjct: 11 LSNEKVLEMYETMLMARRIDERMWLLNRSGKIP-FVISCQGQEAAQIGAAFALDTEKDYV 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGA 162 + YR+ G +L G+ A +M L+G GG H KN G V Sbjct: 70 LPYYRDMGVVLTFGMTAKDLM--LSGFAKAEDPNSGGRQMPGHFGQKKNNIVTGSSPVTT 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 128 QVPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + A N S R + + +PG+ VDG D V + +A R +GP ++E ++Y Sbjct: 188 SVPIEKQLACENVSDRAIGYGMPGVTVDGNDPLEVYKAVKEAADRGRRGEGPTLVETISY 247 Query: 283 RYRGHSM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D +YR+ +E+ + ++ DPI L ++ KEI V KI+N Sbjct: 248 RLTPHSSDDDDRSYRSPDEVAQAKTK-DPIITFGAYLKETGVMNDELEKEINDRVMKIVN 306 Query: 342 NSVEFAQSDKEPDP 355 + ++A++ +P Sbjct: 307 EATDYAENAPYSEP 320 >gi|300709395|ref|YP_003735209.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Halalkalicoccus jeotgali B3] gi|299123078|gb|ADJ13417.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Halalkalicoccus jeotgali B3] Length = 370 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 89/329 (27%), Positives = 164/329 (49%), Gaps = 16/329 (4%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 LE EV + + E+ + Y M L R F+++A L G +G + L GQE V + Sbjct: 22 LEDSEVPDIDDEEVIDIYHQMRLARHFDQRAVSLQRQGRMGTYPPLS-GQEGAQVASAHA 80 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L D + +YREHG L G+ + + G + G + + ++ + Sbjct: 81 LDSEDWLFPSYREHGAGLVRGLSLERTLLYWMGHEDGNAVPEEANIFTVAVP-------- 132 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + +Q+ G A+A K R D + FGDGA ++G +E N A +++ ++ NN Sbjct: 133 -IASQIPHAVGYAWAAKLRGEDTAAICYFGDGATSEGDFHEGLNFAGVFDTPNVFFCNNN 191 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV----KATMDKAVAYCRAHKGP 274 Q+A+ R +A + + ++ G+QVDGMD AV + ++KA + P Sbjct: 192 QWAISVPRERQTASETLAVKASAYGFEGVQVDGMDPLAVYKVTREAVEKAKDPAEGQRRP 251 Query: 275 IIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 +IE + YR+ H+ + DP+ YR +E+ + + DPI ++ LL N + ++ IE Sbjct: 252 TLIEAVQYRFGAHTTADDPSVYRADDEVEKWKKK-DPIPRLETFLLENGYLDGEGVEAIE 310 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDI 362 V++ + ++++ A++ + PDP E+++D+ Sbjct: 311 AAVKEEVADAIDAAEAVERPDPEEMFADV 339 >gi|322371414|ref|ZP_08045963.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Haladaptatus paucihalophilus DX253] gi|320548946|gb|EFW90611.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Haladaptatus paucihalophilus DX253] Length = 369 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 95/329 (28%), Positives = 170/329 (51%), Gaps = 16/329 (4%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L+G EV + + E+ + YR M L R F+E+A L G +G + L GQE +G + Sbjct: 22 LDGMEVPDLSDEELVDMYRQMRLARHFDERAVSLNRQGRMGTYPPLS-GQEGAQIGSVYA 80 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L++ D M +YREHG L G+ + M G + G ++ + Sbjct: 81 LSDDDWMFPSYREHGAALVRGLSLKRTMLYWMGHEAGNDIPDDSNIFTVAVP-------- 132 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + Q+ TG A+A+K + DK + FGDGA ++G +E N A +++ ++ NN Sbjct: 133 -IATQIPHATGAAWASKLKGEDKAFLCYFGDGATSEGDFHEGLNFAGVFDTPSVFFCNNN 191 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV----KATMDKAVAYCRAHKGP 274 Q+A+ R +A +++ ++ G+QVDGMD AV K ++KA + P Sbjct: 192 QWAISVPRERQTASATIAQKAQAYGFEGVQVDGMDPLAVYQVTKEAVEKAKDPAEDEQRP 251 Query: 275 IIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 +IE + YR+ H+ + DP YR +++ E + DPI ++ K LL+ E D++EI Sbjct: 252 TLIEAVQYRFGAHTTADDPTVYRDDDKVAEWKQK-DPIPRMEKFLLNTGRLDEEDVEEIG 310 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDI 362 V++ + ++++ A++ + PD E+++++ Sbjct: 311 EEVKEAVADAIDAAEAVERPDAKEIFNNV 339 >gi|288917048|ref|ZP_06411419.1| Pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EUN1f] gi|288351588|gb|EFC85794.1| Pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EUN1f] Length = 323 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 93/323 (28%), Positives = 161/323 (49%), Gaps = 9/323 (2%) Query: 42 FEVSEFNKEQEL-SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 F+ +E ++ L YR ++ IR E + GGF H IGQE + G ++ Sbjct: 6 FQPAELTRQGRLVHIYRTVVTIRFAELRIRDYVETEGFGGFWHPGIGQEGLQAGAIAAMD 65 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG-SMHMFSTKNGFYGGHGI 159 D + A+R G+ A G+ + + +L GR G ++GKGG ++H S + G G Sbjct: 66 PDDYLYYAHRGLGYAYAKGMPLAALFGDLLGRVTGSTRGKGGGTVHFASAEKRVLGQGGT 125 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 +G+ LG G A A++ ++ VV FGDGA+ +G +E+ A++W L V++V ENN Sbjct: 126 LGSNFVLGAGTALASQLLGDGRVTVVFFGDGASGRGTWHEAALQASVWKLPVVWVCENNG 185 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+ S N + R ++ +PG+ VDG D AV +A+ R GP +IE Sbjct: 186 WALSARFEEQSPTPNIADRASAYGMPGVIVDGQDAIAVMDATTEAIERARRGDGPTLIEA 245 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 T R RGH D YR + + + +DP+ ++ + L + + ++I+ + R+ Sbjct: 246 KTLRIRGHYEGDRQPYR-EDRVKDDEIPNDPVHRLGELL------PDDERRDIDTDARRR 298 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 + + + A + P+ +Y D+ Sbjct: 299 VAEAFDEALAAPRPETTVIYEDV 321 >gi|13516864|dbj|BAB40585.1| pyruvate decarboxylase alpha subunit homolog [Bacillus sp. UTB2301] Length = 356 Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 94/323 (29%), Positives = 158/323 (48%), Gaps = 19/323 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 EF KE Y ++ +R F+ KA L G +G + GQEA VG ++L + D Sbjct: 27 TPEFIKE----LYERLMFVRTFDRKAISLQRQGRLGTYAPFE-GQEAAQVGSALALEKDD 81 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YR+H + G S + GR G +G + + + Q Sbjct: 82 WLFPTYRDHAATITFGHKLSTVFLYWNGRVEGCVPPEGKKIFPPAVP---------IATQ 132 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + TG A A KY+ + +V FGDGA ++G +E N A+++ V++ +NN +A+ Sbjct: 133 LPHATGAAMAEKYKGTKNAAIVYFGDGATSEGDFHEGLNFASVFKAPVVFFNQNNSFAIS 192 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + + +++ V++ IPG+++DG DI AV +A+ R +GP +IE +T+R Sbjct: 193 VPIHKQMNSKTIAQKSVAYGIPGIRLDGNDIFAVYFYTKEALDRARNGEGPTLIEAVTWR 252 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKII 340 Y H+ + DP YR +EE E R +DPI +V +RL+ NK W E +E + I Sbjct: 253 YGAHTTADDPTKYRNQEESLERREKYDPILRV-ERLMKNKGIW-DEKWAASVEEKASQTI 310 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 +V+ ++ PD +L+ + Sbjct: 311 EEAVKEMEAFPAPDVNDLFDHVF 333 >gi|149182076|ref|ZP_01860561.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Bacillus sp. SG-1] gi|148850255|gb|EDL64420.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Bacillus sp. SG-1] Length = 364 Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 91/309 (29%), Positives = 154/309 (49%), Gaps = 11/309 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+ IR F++KA L G +G + GQEA VG +L E D M +YR+HG Sbjct: 44 YRHMVRIRTFDKKAISLQRQGRIGTYAPFE-GQEASQVGSSAALKEDDWMFPSYRDHGAA 102 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G I+ GR G +G K F G I Q+ G A+A Sbjct: 103 MTFGHSLRNILLFWKGRNEGCVPPQG--------KKIFPPGIPIA-TQLPHAAGAAYAEM 153 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + + +V FGDGA ++G +E N+A++ N V++ +NN +A+ + + Sbjct: 154 RKGTKNAAIVYFGDGATSEGDFHEGLNVASVLNAPVVFFNQNNGFAISVPIKKQMKTKTI 213 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 +++ ++++IPG+++DG DI AV KA+ R +GP +IE +T+RY H+ + DP Sbjct: 214 AQKALAYDIPGVRIDGNDIFAVYFETLKALERARNGEGPTLIEAVTWRYGAHTTADDPTK 273 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR + E +E R DPI ++++ + W + ++ ++ +VE +S E D Sbjct: 274 YRDQSESDERRKLGDPIARLQRYMERQGWWDQEWADSVQKEYTAEMDQAVEELESYPEAD 333 Query: 355 PAELYSDIL 363 P ++ + Sbjct: 334 PKVIFDYVF 342 >gi|146295910|ref|YP_001179681.1| transketolase, central region [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409486|gb|ABP66490.1| Transketolase, central region [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 823 Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 110/366 (30%), Positives = 160/366 (43%), Gaps = 68/366 (18%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-------CHLCIGQEAVIVGM 95 E F+ E L YR ML+IR FE + G G HL IGQEA VG Sbjct: 35 ERQNFSDEDLLRIYRDMLIIREFETMLSLIKTRGEYNGIKYDYPGPAHLSIGQEAAAVGQ 94 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASK------------------------------- 124 L + D + ++R HG ++A G+ A + Sbjct: 95 AFILDKNDFIFGSHRSHGEVIAKGLSAIEKLSEDELISIMESYFDGAILKVVEGKQKEKG 154 Query: 125 -------------IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 ++AE+ GR+ G KG GGSMH+F G Y + IVG + G A Sbjct: 155 NVKELAIDFFLYGVLAEIFGRETGFQKGLGGSMHVFFPPFGIYPNNAIVGGSADIAVGAA 214 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAA------LWN------LNVIYVIENNQ 219 K R I +V GDGA G V+E+ +A LW L +I+ NNQ Sbjct: 215 LYKKINRKKGIVIVNIGDGAMGCGPVWEAMCLATMDQYKKLWEGEYRGGLPIIFNFMNNQ 274 Query: 220 YAMGTSVSRASAQTNFSKR-GVSFNIPGM---QVDGMDIRAVKATMDKAVAYCRAHKGPI 275 YAMG + + R G N M +VDG + AV M + +GP+ Sbjct: 275 YAMGGQTRGETMGYDMLARVGAGVNPEQMHAERVDGYNPLAVIDAMKRKKYLLEQKQGPV 334 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +++++TYR GHS SD + YRT+EE+ E ++ DP+ + L+ A+E + EI+ N Sbjct: 335 LLDVVTYRLTGHSPSDSSTYRTKEEL-EAWASQDPLVTFKDELIRVGVATEDKINEIQQN 393 Query: 336 VRKIIN 341 V+++I Sbjct: 394 VKELIT 399 >gi|292491323|ref|YP_003526762.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Nitrosococcus halophilus Nc4] gi|291579918|gb|ADE14375.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Nitrosococcus halophilus Nc4] Length = 358 Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 151/296 (51%), Gaps = 16/296 (5%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M L R F++KA L G +G + +GQEA+ V + + D ++T+YRE+ Sbjct: 36 LPLYRAMALTRLFDKKAVSLQRTGQLGTYAS-SLGQEAISVAIGHVMVPEDTLLTSYREY 94 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKG--GSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 G L GV M EL GG +G GS F V +Q+ G+ Sbjct: 95 GAQLQRGV----TMTELLLYWGGDERGMAYQGSRQDFPISVP-------VASQIPHAVGV 143 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 +A K RR ++ V GDGA ++G YE+ N A +WNL V++VI NN +A+ + + Sbjct: 144 GYAIKLRREPRVAVCVLGDGATSKGDFYEAINAAGVWNLPVVFVINNNCWAISVPLEGQT 203 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 +++ ++ IPG QVDG D+ A++ + V R +GP +IE LTYR H+ + Sbjct: 204 HAQTLAQKAIAAGIPGEQVDGNDVIALQDRIHNGVEKARRGEGPCLIEALTYRLCDHTTA 263 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 D A+ YR + E+ E R DP++++R L E + ++ + + + +V+ Sbjct: 264 DDASRYREQAEV-EARWGFDPLQRLRTHLTQVGAWDETQEQALQTELTQQVEEAVQ 318 >gi|86750917|ref|YP_487413.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Rhodopseudomonas palustris HaA2] gi|86573945|gb|ABD08502.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Rhodopseudomonas palustris HaA2] Length = 323 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 102/308 (33%), Positives = 154/308 (50%), Gaps = 5/308 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ IR EE + YG + HL +GQEAV +L D ++ +R H H LA Sbjct: 12 MMRIRAVEETIAKRYGEQKMRCPTHLSVGQEAVAAAAGAALEPADLAVSGHRAHAHYLAK 71 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G ++AE+ GR G S+GKGGSMH+ GF G IVG V +G G+A+ K +R Sbjct: 72 GGSLKAMIAEIYGRVTGCSRGKGGSMHLIDESAGFMGSTAIVGGTVPVGVGLAYPMKLKR 131 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS-RASAQTNFSK 237 + +I V GD G +E+ N A L L V+++ ENN Y++ + +S R + Sbjct: 132 TGQIACVFLGDAVPETGVFFEAVNFAVLKKLPVLFLCENNGYSVYSPLSVRQPPGRRLYE 191 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN--- 294 F +P DG D RAV A + + VA RA +GP E TYR+R H + N Sbjct: 192 MVAGFGLPTHHGDGNDARAVHAALSEGVAAIRAGEGPRFYEFETYRWREHCGPNYDNDIG 251 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR+ E E DP+ +++ L+ SE + ++ + I+ + FA++ PD Sbjct: 252 YRSAAEY-EAWKLRDPVPALQRALIGEGVVSESGIAAMQAEIDAEIDEAFAFAEASPFPD 310 Query: 355 PAELYSDI 362 E ++D+ Sbjct: 311 AGEAFTDV 318 >gi|289581340|ref|YP_003479806.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Natrialba magadii ATCC 43099] gi|289530893|gb|ADD05244.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Natrialba magadii ATCC 43099] Length = 369 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 92/328 (28%), Positives = 163/328 (49%), Gaps = 16/328 (4%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG EV + ++++ + Y M L+R F+E+A L G +G + L GQE V +L Sbjct: 23 EGVEVPDIDEDELVEMYEQMRLVRHFDERAVSLQRQGRMGTYPPLS-GQEGAQVASAHAL 81 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 D M +YREHG L G+ + + G + G + ++ + Sbjct: 82 DTDDWMFPSYREHGAGLVRGLSLKRTLLYWMGHEQGNKIPEDANIFTVAVP--------- 132 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + Q+ TG A+A+K + +K + FGDGA ++G +E N A +++ I+ NNQ Sbjct: 133 IATQIPHATGAAWASKLKDEEKAFICYFGDGATSEGDFHEGLNFAGVFDTPNIFFCNNNQ 192 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV-KATMD---KAVAYCRAHKGPI 275 +A+ R +A +++ ++ G+QVDGMD AV K T D KA P Sbjct: 193 WAISVPRERQTASATLAQKATAYGFEGVQVDGMDPLAVYKVTRDAVEKAKNPSEDELRPT 252 Query: 276 IIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 +IE + YR+ H+ + DP+ YR EE+ + DPI ++ + ++ + + IE Sbjct: 253 LIEAVQYRFGAHTTADDPSVYRDDEEVERWKQK-DPIPRLETYMRNHGMLDDERVDTIES 311 Query: 335 NVRKIINNSVEFAQSDKEPDPAELYSDI 362 + + +++E A++ + PDPAE+++ + Sbjct: 312 RIESDVADAIEAAEAVERPDPAEIFAHV 339 >gi|307329450|ref|ZP_07608611.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces violaceusniger Tu 4113] gi|306884859|gb|EFN15884.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces violaceusniger Tu 4113] Length = 388 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 92/305 (30%), Positives = 149/305 (48%), Gaps = 13/305 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L RRF+ +A L G +G + L +GQEA +G +L + D + YREHG Sbjct: 64 YRDMVLTRRFDAEATTLQRQGELGLWASL-LGQEAAQIGSGRALHDDDYVFPTYREHGVA 122 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GVD + ++ G G + H+++ ++G+Q TG A Sbjct: 123 WCRGVDPTNLLGMFRGVNHGGWDPNSNNFHLYTI---------VIGSQTLHATGYAMGVA 173 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +D + FGDGA++QG V ESF +A++N V++ +NNQ+A+ + + + Sbjct: 174 KDGADAAVLAYFGDGASSQGDVAESFTFSAVYNAPVVFFCQNNQWAISEPTEKQT-RVPL 232 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 +R + PG++VDG D+ A A A+ R +GP++IE TYR H+ S DP Sbjct: 233 YQRAQGYGFPGVRVDGNDVLACLAVTKAALERARTGQGPMLIEAFTYRMGAHTTSDDPTR 292 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR+ EE E+ DPI ++R L A + E+E + + ++ +PD Sbjct: 293 YRSPEE-RELWETKDPILRLRTLLTREGLADDAYFAELERESDALAKRVRDAVRAMPDPD 351 Query: 355 PAELY 359 L+ Sbjct: 352 DMALF 356 >gi|120554306|ref|YP_958657.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Marinobacter aquaeolei VT8] gi|120324155|gb|ABM18470.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Marinobacter aquaeolei VT8] Length = 394 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 93/315 (29%), Positives = 155/315 (49%), Gaps = 5/315 (1%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + + KE+ L YR M+ R +E+ G + F C G+EA ++G +L + Sbjct: 39 KAPDLEKEKALRIYRAMVTTRILDERMLAAQRQGRLS-FYMQCTGEEAAVIGSAAALDDN 97 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D ++ YRE G + G + M +L G + KG+ +H S K + + Sbjct: 98 DMIMAQYREQGALAYRGFSIDEFMNQLFGNELDYGKGRQMPVHYGSKKLNYMTISSPLAT 157 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ TG A+ K + FG+GAA++G + + N+AA+ + VI++ NN YA+ Sbjct: 158 QIPQATGYAYGQKLAGDGHCTITYFGEGAASEGDFHAALNMAAVHRVPVIFLCRNNGYAI 217 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T + A + R + + ++VDG D+ A+ A H P++IE ++Y Sbjct: 218 STPAAEQFAADGVAPRAYGYKMDVIRVDGNDVLAMYEATRAARELAVKHNRPVLIEAMSY 277 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS S DP+ YR+++E R DPI ++R L KW SE D K+ + N+R+ + Sbjct: 278 RLAAHSSSDDPSGYRSKDEEAVWREK-DPILRMRLWLESKKWWSEDDEKQFQENMRREVL 336 Query: 342 NSVEFAQSDKEPDPA 356 +++ AQ K P PA Sbjct: 337 ETMKRAQ--KRPPPA 349 >gi|167633774|ref|ZP_02392098.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. A0442] gi|170687233|ref|ZP_02878451.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. A0465] gi|254683926|ref|ZP_05147786.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. CNEVA-9066] gi|254744162|ref|ZP_05201845.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. Kruger B] gi|167531180|gb|EDR93867.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. A0442] gi|170668850|gb|EDT19595.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus anthracis str. A0465] Length = 333 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 103/307 (33%), Positives = 151/307 (49%), Gaps = 7/307 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ L +R MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 14 LSDEQVLEMFRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYA 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A ++M + G + G G M H KN G V Q Sbjct: 73 LPYYRDMGVVLAFGMTAKELMLSGFAKAGDPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQ 131 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 132 VPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 191 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + A N S R + + +PG VDG D AV + +A R +GP +IE ++YR Sbjct: 192 IPDEKQLACKNVSDRAIGYGMPGYTVDGNDPLAVYKAVKEAADRGRRGEGPTLIETVSYR 251 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 HS D YR +EE+ E + N D I L +E K++ + I+N Sbjct: 252 LTAHSSDDDDRVYRDKEEVEEAKKN-DSIVTFAAYLKEVGVLTEESEKQMLDEIMHIVNE 310 Query: 343 SVEFAQS 349 + E+A++ Sbjct: 311 ATEYAEN 317 >gi|307296842|ref|ZP_07576660.1| dehydrogenase E1 component [Sphingobium chlorophenolicum L-1] gi|306877755|gb|EFN08981.1| dehydrogenase E1 component [Sphingobium chlorophenolicum L-1] Length = 671 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/261 (34%), Positives = 133/261 (50%), Gaps = 3/261 (1%) Query: 61 LIRRFEEKAGQLYGM--GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 IR FE KA L V G H C GQEAV +G L + DQ++ YR HG +A Sbjct: 25 FIRAFEAKALALTQTKPPSVLGSMHFCAGQEAVPLGAVAGLRDDDQIVCTYRGHGWAIAS 84 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+D + AE+ + GI+ G+ GS M + F G + IVGA ++ G+A AN ++ Sbjct: 85 GLDPRAVFAEICQKAEGINGGRAGSALMMAPDTRFIGENSIVGAGTTIACGVAMANLHKG 144 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + ++ VV GDGA NQG V E+F +AA L VI+V+ENN ++ TS ++R Sbjct: 145 NGRVVVVTIGDGALNQGAVSEAFALAAARKLPVIFVVENNGWSEMTSTDDMFLAKRLAQR 204 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 + IP + G D V+ + A R GP+++E R GH D +YR++ Sbjct: 205 TAGYGIPSATIHGTDPIVVRDSFAIAAERARNGDGPVLLECRVPRLWGHYNRDMEHYRSK 264 Query: 299 EEINEMRSNHDPIEQVRKRLL 319 E+ DP + +R++ Sbjct: 265 ED-RRKAEQIDPFITLSQRMI 284 >gi|160872851|ref|ZP_02062983.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rickettsiella grylli] gi|159121650|gb|EDP46988.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rickettsiella grylli] Length = 364 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 168/308 (54%), Gaps = 12/308 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ Y+ MLLIR F+EKA L G + + + +GQEA+ VG+ S+ + D + YR++ Sbjct: 36 LTLYQQMLLIRLFDEKAIALQRTGRLNTYASI-LGQEAISVGIGASMHKEDVLCPFYRDY 94 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G L GV S+I++ KG + H FS + + Q+ G+A Sbjct: 95 GAQLMRGVKMSEILS--------FWKGNEWANH-FSECYFDFPICVPIATQLLHAAGVAT 145 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R+ ++ V GDGA ++G YE+ NIA +W L ++ VI NNQ+A+ + S Sbjct: 146 AFKLRKQKRVVVTTCGDGATSEGDFYEALNIAGVWKLPLVIVINNNQWAISMPRKKQSHA 205 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ I G Q+DG D+ AVK MD+A+A R +GP +IE L+YR H+ +D Sbjct: 206 QTLAQKAIAAGIQGEQIDGNDLIAVKWVMDRALAKAREGQGPSLIEALSYRLSDHTTADD 265 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 ++ YR EE+++ +P+++++ L++ K S+ ++ + ++ I N+V S Sbjct: 266 SSRYRREEELHDAWQK-EPLKRLKNYLMNQKMWSDAAEEKFKKECKEHIENAVTDYLSLP 324 Query: 352 EPDPAELY 359 +P +++ Sbjct: 325 KPAVTDMF 332 >gi|83646416|ref|YP_434851.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component subunit alpha [Hahella chejuensis KCTC 2396] gi|83634459|gb|ABC30426.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Hahella chejuensis KCTC 2396] Length = 395 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/324 (27%), Positives = 163/324 (50%), Gaps = 3/324 (0%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 +G ++ E ++E+ L YR M+ R +E+ G + + G+E +VG +L Sbjct: 38 KGAKLPEMDQEEALKIYRTMVFTRVLDERMLAAQRQGRLSFYLQ-STGEEGTVVGFAAAL 96 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 + D ++ YRE G + G + M +L G + KG+ +H S K + Sbjct: 97 DDRDMIMAQYREQGALAYRGFSVDEFMNQLFGNELDYGKGRQMPIHYGSAKLNYMTISSP 156 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + Q+ G A+ K V FG+GAA++G + + N+A++ + VI++ NN Sbjct: 157 LATQIPQAAGYAYGQKLEGKGLCTVTVFGEGAASEGDFHAALNMASVHKVPVIFLCRNNG 216 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ T S A + R + +++ ++VDG D+ AV A P++IE Sbjct: 217 YAISTPSSEQFAADGIAPRALGYSMRAIRVDGNDVLAVYLATLAARKIAVEENEPVLIEA 276 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 +TYR HS S DP+ YR+++E + R+ DPI ++R L+ KW SE + K+++ ++R+ Sbjct: 277 MTYRLAAHSSSDDPSGYRSKKEEDVWRAK-DPIARMRNWLIKKKWWSEDEEKQLQDSMRQ 335 Query: 339 IINNSVEFAQSDKEPDPAELYSDI 362 + ++++ A+ P L +D+ Sbjct: 336 EVLDAMKKAEKRPPPPVESLVTDV 359 >gi|29830919|ref|NP_825553.1| branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces avermitilis MA-4680] gi|868152|gb|AAB03377.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Streptomyces avermitilis] gi|29608032|dbj|BAC72088.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces avermitilis MA-4680] Length = 406 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 93/320 (29%), Positives = 155/320 (48%), Gaps = 13/320 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ E+ YR M+L RRF+ +A L G +G + + +GQEA +G + + D Sbjct: 62 VADITPEELRGLYRDMVLSRRFDAEATSLQRQGELGLWASM-LGQEAAQIGSGRATRDDD 120 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YREHG GVD + ++ G G + H+++ ++G+Q Sbjct: 121 YVFPTYREHGVAWCRGVDPTNLLGMFRGVNNGGWDPNSNNFHLYTI---------VIGSQ 171 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A +D + FGDGA++QG V ESF +A++N V++ +NNQ+A+ Sbjct: 172 TLHATGYAMGIAKDGADSAVIAYFGDGASSQGDVAESFTFSAVYNAPVVFFCQNNQWAIS 231 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + + + +R + PG++VDG D+ A A A+ R +GP ++E TYR Sbjct: 232 EPTEKQT-RVPLYQRAQGYGFPGVRVDGNDVLACLAVTKWALERARRGEGPTLVEAFTYR 290 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ S DP YR EE E DPI ++R L + A EG E+E+ + Sbjct: 291 MGAHTTSDDPTKYRADEE-REAWEAKDPILRLRTYLEASNHADEGFFAELEVESEALGRR 349 Query: 343 SVEFAQSDKEPDPAELYSDI 362 E ++ +PD ++ ++ Sbjct: 350 VREVVRAMPDPDHFAIFENV 369 >gi|239980725|ref|ZP_04703249.1| branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces albus J1074] Length = 449 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 93/317 (29%), Positives = 151/317 (47%), Gaps = 13/317 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ E+ YR M+L RRF+ +A L G +G + L +GQEA +G + E D Sbjct: 110 VADITPEELRGLYRDMVLTRRFDAEATSLQRQGELGLWASL-LGQEAAQIGSGRATREDD 168 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YREHG GVD + ++ G G +++ ++G+Q Sbjct: 169 WVFPTYREHGVAWCRGVDPANLLGMFRGVNHGGWDPNSNHFQLYTI---------VIGSQ 219 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A +D + FGDGA++QG V E+F +A++N V++ +NNQ+A+ Sbjct: 220 TLHATGYAMGITKDGADSAVIAYFGDGASSQGDVNEAFTFSAVYNAPVVFFCQNNQWAIS 279 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + + + +R F PG++VDG D+ A A A+A R +GP ++E TYR Sbjct: 280 EPTEKQT-RVPLYQRASGFGFPGVRVDGNDVLACLAVTKAALARARRGEGPTLVEAFTYR 338 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ S DP YR+ +E E DPI+++R L A E +E + Sbjct: 339 MGAHTTSDDPTRYRSDDE-RESWEARDPIQRLRAHLEAEGHADEAFFTALEEESEALGRR 397 Query: 343 SVEFAQSDKEPDPAELY 359 E ++ +PDP ++ Sbjct: 398 VREAVRAMPDPDPMAMF 414 >gi|291442719|ref|ZP_06582109.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Streptomyces ghanaensis ATCC 14672] gi|291345614|gb|EFE72570.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Streptomyces ghanaensis ATCC 14672] Length = 358 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 99/331 (29%), Positives = 162/331 (48%), Gaps = 21/331 (6%) Query: 40 EGFEVSEFNKEQELSA------YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 EG V + E+SA YR M RR + + L G +G + L +GQEA + Sbjct: 12 EGELVPHPDYHAEISADGLRELYRDMAWSRRMDAEGVTLQRQGELGLWPSL-LGQEAAQI 70 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G +L D + +YR+HG L VD ++ G G + H+++ Sbjct: 71 GAGRALRAEDYVFPSYRDHGVALCRDVDPLHLLRMFRGVSNGGWDPADRNFHLYTL---- 126 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 ++G+QV TG A + +VCFGDGA +QG V E+FN AA+++ V++ Sbjct: 127 -----VIGSQVLHATGYAMGLAQDGAPGAVLVCFGDGATSQGDVSEAFNFAAVFHAPVVF 181 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 +NNQ+A+ S R + + +R F PG++VDG D+ A +A + A+ R+ +G Sbjct: 182 FCQNNQWAISESNDRQT-RVPLHQRAQGFGFPGVRVDGNDVLACRAVTEWALERARSGEG 240 Query: 274 PIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P +IE TYR H+ S DP YR EE+ R DP+ ++R L H WA + + Sbjct: 241 PTLIEAYTYRMGAHTTSDDPTKYRDAEELEHWRLR-DPLARLRTLLEHRGWADDDFFARV 299 Query: 333 EMNV-RKIINNSVEFAQSDKEPDPAELYSDI 362 + ++ ++ + Q+ +P P L++ + Sbjct: 300 DAECEQRAVHLRTQLRQT-ADPGPEHLFAHV 329 >gi|127512853|ref|YP_001094050.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella loihica PV-4] gi|126638148|gb|ABO23791.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella loihica PV-4] Length = 392 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 95/343 (27%), Positives = 168/343 (48%), Gaps = 13/343 (3%) Query: 32 DCVDIPFLEGFEV--SEFNK------EQELSA--YRLMLLIRRFEEKAGQLYGMGMVGGF 81 D + IP L+ + + F +Q+L+A Y + R +E+ G + F Sbjct: 20 DSLSIPILKILQADGTTFENAVLPVIDQDLAAKIYDTCVFTRVLDERMLAAQRQGRIS-F 78 Query: 82 CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKG 141 C G+EA +VG +L + D ++ YREH I G + M ++ + + KG+ Sbjct: 79 YMTCTGEEAAVVGSVAALDQDDVILAQYREHAAIRYRGFTTEQFMNQMFSNEKDLGKGRQ 138 Query: 142 GSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF 201 +H + + Q+ TG+ ++ K + + + FG+GAA++G + Sbjct: 139 MPIHYGCEALNYQTISSPLATQIPQATGVGYSLKMQGKRNVAICYFGEGAASEGDFHAGL 198 Query: 202 NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 N+AA+ N VI+ NN YA+ T + A + RGV + + ++VDG D+ AV A Sbjct: 199 NMAAVLNSPVIFFCRNNGYAISTPTNEQFAGNGIASRGVGYGMHTIRVDGNDMLAVMAAT 258 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLH 320 +A AY H P++IE +TYR HS S DP+ YR+++E + + HDP+++ + L++ Sbjct: 259 QQARAYALEHNKPVLIEAMTYRLGAHSSSDDPSGYRSKDEEAKWQ-QHDPVKRFKLWLIN 317 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 W +E D + R+ + +V+ A+ P E+ D+L Sbjct: 318 KGWLAESDDAALYEKYREEVLAAVKVAEKLPAPKIDEIIEDVL 360 >gi|302552769|ref|ZP_07305111.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces viridochromogenes DSM 40736] gi|302470387|gb|EFL33480.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces viridochromogenes DSM 40736] Length = 400 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 93/308 (30%), Positives = 151/308 (49%), Gaps = 13/308 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L RRF+ +A L G +G + L +GQEA +G + E D + YREHG Sbjct: 77 YRDMVLTRRFDAEATALQRQGELGLWASL-LGQEAAQIGSGRATREDDYVFPTYREHGVA 135 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GVD + ++ G G + +++ ++G+Q TG A Sbjct: 136 WCRGVDPTNLLGMFRGVNNGGWDPNSNNFQLYTI---------VIGSQTLHATGYAMGVA 186 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +D + FGDGA++QG V ESF +A++N V++ +NNQ+A+ + S + Sbjct: 187 KDGADSAVIAYFGDGASSQGDVAESFTFSAVYNAPVVFFCQNNQWAISEPTEKQS-RVPI 245 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 +R F PG++VDG D+ V A A+ R+ +GP ++E TYR H+ S DP+ Sbjct: 246 YQRAQGFGFPGVRVDGNDVLGVLAVTRWALERARSGEGPTLVEAFTYRMGAHTTSDDPSR 305 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR EE + DPI ++R+ L + A EG E+E + E ++ +PD Sbjct: 306 YRGDEERQAWEAK-DPILRLRRYLEASNHADEGFFAELEAESEALGKRVREAVRAMPDPD 364 Query: 355 PAELYSDI 362 ++ ++ Sbjct: 365 RFAIFENV 372 >gi|169236790|ref|YP_001689990.1| branched-chain amino acid dehydrogenase E1 component alpha subunit [Halobacterium salinarum R1] gi|167727856|emb|CAP14644.1| putative branched-chain amino acid dehydrogenase E1 component alpha subunit [Halobacterium salinarum R1] Length = 371 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 84/331 (25%), Positives = 160/331 (48%), Gaps = 17/331 (5%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 ++G EV + ++ + YR M L RRF+E+A L G +G + L GQE + M Sbjct: 22 LVDGAEVPDLTDDELVEMYRYMKLARRFDERAVSLQRQGRIGTYPPLS-GQEGAQIASAM 80 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +L + D ++ +YREHG L G+ + G + G + + + Sbjct: 81 ALADDDWIVPSYREHGASLVRGLPLKDTLLYWMGDERG---------NAIPAEENIFTVA 131 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + +Q+ TG+ +A++ + +C FGDGA ++G +E N A +++ ++ Sbjct: 132 VPIASQIPHATGMGWASQLKDESDTAFMCYFGDGATSEGDFHEGLNFAGVYDTPNVFFCN 191 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--- 273 NNQ+A+ + +A +++ ++ G+QVDGMD AV A+ + Sbjct: 192 NNQWAISVPREQQTATDTLAQKAAAYGFEGVQVDGMDPLAVYQVAHDAIEKAKDPDEDEM 251 Query: 274 -PIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 P +IE + YR+ H+ + DP+ YR E+ E + DPI ++ L+ + ++ Sbjct: 252 RPTLIEAVQYRFGAHTTADDPSVYREESEV-EAWKDKDPIPRLETFLVETDRLDDAAIES 310 Query: 332 IEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 IE ++ + +++E A+ PDPA ++ ++ Sbjct: 311 IEADIEDAVADAIEAAEETPRPDPASMFENV 341 >gi|291452584|ref|ZP_06591974.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Streptomyces albus J1074] gi|291355533|gb|EFE82435.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Streptomyces albus J1074] Length = 447 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 93/317 (29%), Positives = 151/317 (47%), Gaps = 13/317 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ E+ YR M+L RRF+ +A L G +G + L +GQEA +G + E D Sbjct: 108 VADITPEELRGLYRDMVLTRRFDAEATSLQRQGELGLWASL-LGQEAAQIGSGRATREDD 166 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YREHG GVD + ++ G G +++ ++G+Q Sbjct: 167 WVFPTYREHGVAWCRGVDPANLLGMFRGVNHGGWDPNSNHFQLYTI---------VIGSQ 217 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A +D + FGDGA++QG V E+F +A++N V++ +NNQ+A+ Sbjct: 218 TLHATGYAMGITKDGADSAVIAYFGDGASSQGDVNEAFTFSAVYNAPVVFFCQNNQWAIS 277 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + + + +R F PG++VDG D+ A A A+A R +GP ++E TYR Sbjct: 278 EPTEKQT-RVPLYQRASGFGFPGVRVDGNDVLACLAVTKAALARARRGEGPTLVEAFTYR 336 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ S DP YR+ +E E DPI+++R L A E +E + Sbjct: 337 MGAHTTSDDPTRYRSDDE-RESWEARDPIQRLRAHLEAEGHADEAFFTALEEESEALGRR 395 Query: 343 SVEFAQSDKEPDPAELY 359 E ++ +PDP ++ Sbjct: 396 VREAVRAMPDPDPMAMF 412 >gi|86738781|ref|YP_479181.1| pyruvate dehydrogenase [Frankia sp. CcI3] gi|86565643|gb|ABD09452.1| pyruvate dehydrogenase [Frankia sp. CcI3] Length = 399 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 103/354 (29%), Positives = 169/354 (47%), Gaps = 18/354 (5%) Query: 16 ALNPSVSAKRAATSSVDCVDIPFLE---GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQL 72 A P S RA D P ++++ + YR M+ IRRF+E+A L Sbjct: 24 APGPDPSRARAGGVDAAGADPPRTAVDLAAQIADLTDDDLYGLYRDMVFIRRFDEEATSL 83 Query: 73 YGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR 132 G +G + L GQEA VG +L GD + +YREHG GV +I+A G Sbjct: 84 QRQGELGLWASL-RGQEAAQVGSGRALRPGDMVFPSYREHGVAWCRGVRPREILAIYRGT 142 Query: 133 Q-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 GG G G ++S +VG+Q TG A ++ + FGDGA Sbjct: 143 TLGGWDPGTHGCA-LYSI---------VVGSQALHATGYAMGIARDGTNDAAIAYFGDGA 192 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 +++G V E+F A+++ +++ +NNQ+A+ R S + R F PG++VDG Sbjct: 193 SSEGDVSEAFGWASVFAAPLVFFCQNNQWAISAPARRQS-RIEIVHRAAGFGFPGVRVDG 251 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDP 310 D+ A A A+A RA +GP+++E +TYR H+ + DP+ YR + E++ R DP Sbjct: 252 NDVLACLAVTRWALATARAGRGPVLVEAVTYRMNPHTTADDPSRYRPKGELDMWR-RRDP 310 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 ++++R L +E L+++ + + + +P PA L+ + + Sbjct: 311 LDRMRAYLTARGLLTEESLRQLAIEADSFAHELRAQCVALPDPIPASLFDHVQV 364 >gi|15791040|ref|NP_280864.1| pyruvate dehydrogenase alpha subunit [Halobacterium sp. NRC-1] gi|10581633|gb|AAG20344.1| pyruvate dehydrogenase alpha subunit [Halobacterium sp. NRC-1] Length = 419 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 84/331 (25%), Positives = 160/331 (48%), Gaps = 17/331 (5%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 ++G EV + ++ + YR M L RRF+E+A L G +G + L GQE + M Sbjct: 70 LVDGAEVPDLTDDELVEMYRYMKLARRFDERAVSLQRQGRIGTYPPLS-GQEGAQIASAM 128 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +L + D ++ +YREHG L G+ + G + G + + + Sbjct: 129 ALADDDWIVPSYREHGASLVRGLPLKDTLLYWMGDERG---------NAIPAEENIFTVA 179 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + +Q+ TG+ +A++ + +C FGDGA ++G +E N A +++ ++ Sbjct: 180 VPIASQIPHATGMGWASQLKDESDTAFMCYFGDGATSEGDFHEGLNFAGVYDTPNVFFCN 239 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--- 273 NNQ+A+ + +A +++ ++ G+QVDGMD AV A+ + Sbjct: 240 NNQWAISVPREQQTATDTLAQKAAAYGFEGVQVDGMDPLAVYQVAHDAIEKAKDPDEDEM 299 Query: 274 -PIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 P +IE + YR+ H+ + DP+ YR E+ E + DPI ++ L+ + ++ Sbjct: 300 RPTLIEAVQYRFGAHTTADDPSVYREESEV-EAWKDKDPIPRLETFLVETDRLDDAAIES 358 Query: 332 IEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 IE ++ + +++E A+ PDPA ++ ++ Sbjct: 359 IEADIEDAVADAIEAAEETPRPDPASMFENV 389 >gi|312892380|ref|ZP_07751875.1| dehydrogenase E1 component [Mucilaginibacter paludis DSM 18603] gi|311295164|gb|EFQ72338.1| dehydrogenase E1 component [Mucilaginibacter paludis DSM 18603] Length = 659 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/314 (28%), Positives = 154/314 (49%), Gaps = 2/314 (0%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 F + + + + Y+ +L R EEK L G +G + IGQEA+ VG +++ Sbjct: 3 FNRKQLDNDTLIRFYKTLLWPRLVEEKMLILLRQGRIGKWFS-GIGQEAIAVGATLAMKA 61 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 + ++ +R G A + ++MA+ G G +KG+ S H + ++ G +G Sbjct: 62 DEYILPMHRNLGVFTARNIPLMRLMAQWQGTAAGFTKGRDRSFHFGTQEHKIIGMISHLG 121 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ L GIA A+ K +V G+G ++G +E+ N+A++WNL VI++IENN Y Sbjct: 122 PQMGLADGIALADILSGKQKATLVFTGEGGTSEGDFHEALNVASVWNLPVIFLIENNGYG 181 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T S TN R V + I G QV+G +I V + + + R P+++E +T Sbjct: 182 LSTPTSEQYNCTNLVDRAVGYGIEGRQVNGNNILEVYHAISEITSAIRQKPRPVLLECIT 241 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 +R RGH + Y + I+E DPI LL D+ +I+ +++I+ Sbjct: 242 FRMRGHEEASGTKYVPQYLIDEWL-KRDPISNYEDYLLGQNILQLKDITQIKTRFKQVID 300 Query: 342 NSVEFAQSDKEPDP 355 +E A +D + P Sbjct: 301 TEIEKAFNDDDIVP 314 >gi|21222227|ref|NP_628006.1| branched-chain alpha keto acid dehydrogenase E1 subunit alpha [Streptomyces coelicolor A3(2)] gi|256786678|ref|ZP_05525109.1| branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces lividans TK24] gi|289770571|ref|ZP_06529949.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces lividans TK24] gi|5457252|emb|CAB46940.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces coelicolor A3(2)] gi|289700770|gb|EFD68199.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces lividans TK24] Length = 417 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 96/320 (30%), Positives = 157/320 (49%), Gaps = 13/320 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ ++ YR M+L RRF+ +A L G +G + L +GQEA +G + E D Sbjct: 82 VADITPDELRGLYRDMVLTRRFDAEATALQRQGELGLWASL-LGQEAAQIGSGRATREDD 140 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YREHG GVD + ++ G G + H+++ ++G+Q Sbjct: 141 YVFPTYREHGVAWCRGVDPTNLLGMFRGVNNGGWDPNSNNFHLYTI---------VIGSQ 191 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A +D + FGDGA++QG V E+FN AA++N V++ +NNQ+A+ Sbjct: 192 ALHATGYAMGVAKDGADSGVIAYFGDGASSQGDVSEAFNFAAVYNAPVVFFCQNNQWAIS 251 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S + + + +R F PG++VDG D+ A A A+ R +GP +IE TYR Sbjct: 252 ESNEKQT-RVPLYQRAQGFGFPGVRVDGNDVLASLAVTRWALDRARRGEGPALIEAYTYR 310 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ S DP+ YR +E + DPI ++R+ L A EG E+E + Sbjct: 311 MGAHTTSDDPSRYRHDDERAAWEAK-DPILRLRRFLESANHADEGFFAELEAESETLGKR 369 Query: 343 SVEFAQSDKEPDPAELYSDI 362 E ++ +PD ++ ++ Sbjct: 370 VREVVRAMPDPDRFAIFENV 389 >gi|332977527|gb|EGK14299.1| 3-methyl-2-oxobutanoate dehydrogenase [Desmospora sp. 8437] Length = 330 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 97/326 (29%), Positives = 161/326 (49%), Gaps = 5/326 (1%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG + + +Q L YR+MLL R+ +E+ L G + F C GQEA+ VG +L Sbjct: 4 EGHKELGLSDDQVLEMYRMMLLARKVDERMWLLNRAGKIP-FVISCQGQEAIQVGAAFAL 62 Query: 100 T-EGDQMITAYREHGHILACGVDA-SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 E D + YR+ G +LA G A ++++ + S G+ H + G Sbjct: 63 DREKDWLCPYYRDLGMMLAFGQSARDQMLSAFAKAEDPNSGGRQMPGHYGDKRFRIVSGS 122 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 V Q+ G+A A K + D + + FG+G++NQG +E N A + L VI++ EN Sbjct: 123 SPVTTQLLHAVGVALAAKMEKKDFVTLTTFGEGSSNQGDFHEGLNFAGVHKLPVIFMCEN 182 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N+YA+ V + A + + RG + +PG++VDG D V + +A R +GP +I Sbjct: 183 NKYAISVPVEKQLAGGSVAARGQGYGMPGIEVDGNDPLKVFKVVREAADRARRGEGPTLI 242 Query: 278 EMLTYRYRGHSM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E ++YR HS D YR +EE+ E R DP+ Q + L + E + + Sbjct: 243 EAISYRLVPHSSDDDDRTYRKKEEVEEARKK-DPLVQFNQYLQDSGLLDEEKENALNREI 301 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDI 362 +++ + E+A++ P+ E Y+ + Sbjct: 302 AHLVDEATEYAEAAPYPEAEETYTHV 327 >gi|307544960|ref|YP_003897439.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Halomonas elongata DSM 2581] gi|307216984|emb|CBV42254.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Halomonas elongata DSM 2581] Length = 407 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 92/332 (27%), Positives = 166/332 (50%), Gaps = 11/332 (3%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 +EG E E +++ Y+ ML R +E+ G + F C G+EA +VG Sbjct: 34 LVEGAEAPELERDKARRIYQAMLATRVMDERMMAAQRQGRLS-FYMQCTGEEAAVVGATA 92 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +L + D ++ YRE G ++ G + M +L G + KG+ +H S K + Sbjct: 93 ALDDADMIMAQYREQGALVYRGFSFDEFMNQLFGNELDYGKGRQMPVHYGSRKLHYMTIS 152 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 +G Q+ TG A+ K +V FG+GAA++G + + N+AA+ VI+ N Sbjct: 153 SPLGTQIPQATGYAYGQKLAGEGLCTLVFFGEGAASEGDFHAALNMAAVHEAPVIFFCRN 212 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N YA+ T A + R + + + +++DG DI AV ++A H P++I Sbjct: 213 NGYAISTPTVEQFAADGVAPRALGYRMHVIRIDGNDILAVYRATEEARRIAVEHNKPVLI 272 Query: 278 EMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E +TYR HS S DP+ YR+++E R DPI ++++ L W ++ + + ++ + Sbjct: 273 EAMTYRLAAHSSSDDPSGYRSKKEEEAWREK-DPILRMKRWLAERDWWTDDEEQALQEEL 331 Query: 337 RKIINNSVEFAQSDKEPDPA------ELYSDI 362 R+ + +++ +++K P PA ++Y+D+ Sbjct: 332 RREVLETMK--RAEKRPPPALGTLVTDVYADV 361 >gi|295400998|ref|ZP_06810973.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus thermoglucosidasius C56-YS93] gi|294977000|gb|EFG52603.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus thermoglucosidasius C56-YS93] Length = 360 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 157/309 (50%), Gaps = 13/309 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ F+ E + YR M R +E+ ++ G +G + GQEA +G +L D Sbjct: 26 LASFSDEFLFALYRWMRKARVIDERLLKMQRQGRIGTYAPFG-GQEAAQIGSVFALESND 84 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGS-MHMFSTKNGFYGGHGIVGA 162 + YRE LA G+ ++I L G +S G+ +++F + I+GA Sbjct: 85 WIFPTYREIAACLAHGLPLAQIFRYLRGH---LSGGRTPEHLNIFPIQI-------IIGA 134 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q TG A+A K + ++ V FGDGA +QG +E+ N A+++ + VI+ +NNQYA+ Sbjct: 135 QTLHATGCAWATKLKGETQVSVCYFGDGATSQGDFHEALNFASVYQVPVIFFCQNNQYAI 194 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 V + +A +++ V++ + G+ VDG D AV T+ +A R GP++IE TY Sbjct: 195 SVPVHKQTASRTIAQKAVAYGMKGVLVDGNDALAVYKTVKEAADAARNGGGPVLIEAFTY 254 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R H+ S DPA YR EE + R DP+ ++R L +EG+ +E V + Sbjct: 255 RLGPHTTSDDPAKYRNAEEAEKWRRKKDPLHRLRVLLEKRGIWTEGEEEEWVAQVNGEVT 314 Query: 342 NSVEFAQSD 350 + E A +D Sbjct: 315 AAYEEAAAD 323 >gi|312109367|ref|YP_003987683.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacillus sp. Y4.1MC1] gi|311214468|gb|ADP73072.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. Y4.1MC1] Length = 360 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 158/309 (51%), Gaps = 13/309 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ F+ E ++ YR M R +E+ ++ G +G + GQEA +G +L D Sbjct: 26 LASFSDEFLVALYRWMRKARVIDERLLKMQRQGRIGTYAPFG-GQEAAQIGSVFALESND 84 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGS-MHMFSTKNGFYGGHGIVGA 162 + YRE LA G+ ++I L G +S G+ +++F + I+GA Sbjct: 85 WIFPTYREIAACLAHGLPLAQIFRYLRGH---LSGGRTPEHLNIFPIQI-------IIGA 134 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q TG A+A K + ++ V FGDGA +QG +E+ N A+++ + VI+ +NNQYA+ Sbjct: 135 QTLHATGCAWATKLKGETQVSVCYFGDGATSQGDFHEALNFASVYQVPVIFFCQNNQYAI 194 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 V + +A +++ V++ + G+ VDG D AV T+ +A R GP++IE TY Sbjct: 195 SVPVHKQTASRTIAQKAVAYGMKGVLVDGNDALAVYKTVKEAADAARNGGGPVLIEAFTY 254 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R H+ S DPA YR EE + R DP+ ++R L +EG+ +E V + Sbjct: 255 RLGPHTTSDDPAKYRNAEEAEKWRRKKDPLHRLRVLLEKRGIWTEGEEEEWVAQVNGEVT 314 Query: 342 NSVEFAQSD 350 + E A +D Sbjct: 315 AAYEEAAAD 323 >gi|300791016|ref|YP_003771307.1| pyruvate dehydrogenase E1 component subunit alpha [Amycolatopsis mediterranei U32] gi|299800530|gb|ADJ50905.1| pyruvate dehydrogenase E1 component subunit alpha [Amycolatopsis mediterranei U32] Length = 401 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/327 (30%), Positives = 158/327 (48%), Gaps = 22/327 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + E YR M+L+RR + +A + G +G + L +GQEA +G +L D Sbjct: 61 VEDVDAEALRGLYRDMVLVRRADREANAMQRQGQLGIWVPL-LGQEAAQIGSGRALKAND 119 Query: 104 QMITAYREHGHILACGVDASKIMA--ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 +YREHG A GVD ++ T G +G G H ++ ++G Sbjct: 120 MAFPSYREHGVAYARGVDMKDLLGIFRCTDHSGWDYQGTG--FHPYTI---------VIG 168 Query: 162 AQVSLGTGIAFANKYR----RSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIE 216 QV G A K+ D +C FGDGA +QG V+E F AA+++ +++ + Sbjct: 169 NQVLNAAGYAMGQKFEGKVGDDDGEATICYFGDGATSQGDVHEGFVWAAVYDAPLVFFCQ 228 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ+A+ R S + +R + PG++VDG D+ A A A+ CR GP++ Sbjct: 229 NNQWAISEPTERQS-RLPLYQRARGYGFPGIRVDGNDVLACLAVSRWALDECRHGNGPVL 287 Query: 277 IEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 IE TYR H+ + DP YR +E+ E + DPIE+VR L N +A ++ + Sbjct: 288 IEAFTYRMDAHTTTDDPTRYRLSDELEEWKLK-DPIERVRAYLARNGYADHDYFDSVQAD 346 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 + E+ + EP P ++S++ Sbjct: 347 ADAFAADLREYTFNMPEPPPERIFSNV 373 >gi|291446064|ref|ZP_06585454.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Streptomyces roseosporus NRRL 15998] gi|291349011|gb|EFE75915.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Streptomyces roseosporus NRRL 15998] Length = 412 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 105/365 (28%), Positives = 168/365 (46%), Gaps = 25/365 (6%) Query: 8 VTVGDIKMALNP------SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSA------ 55 VTV A P + +AK+ ++ V + EG V + +LSA Sbjct: 27 VTVESTAAARKPRRASKRTSAAKKPQSAEPQLVQLLTPEGERVEHPDYSIDLSAEELRGL 86 Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L RRF+ +A L G +G + L +GQEA +G +L + D + YREHG Sbjct: 87 YRDMVLTRRFDAEATALQRQGELGLWASL-LGQEAAQIGSGRALRDDDYVFPTYREHGVA 145 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GVD + ++ G G + H+++ ++G+Q TG A Sbjct: 146 WCRGVDPTNLLGMFRGVNHGGWDPNSNNFHLYTI---------VIGSQTLHATGYAMGVA 196 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +D + FGDGA++QG V ESF +A++N V++ +NNQ+A+ R + + Sbjct: 197 KDGADSAVIAYFGDGASSQGDVAESFTFSAVYNAPVVFFCQNNQWAISEPTERQT-RVPL 255 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 +R + PG++VDG D+ A A A+ R +GP ++E TYR H+ S DP Sbjct: 256 YQRAQGYGFPGVRVDGNDVLACLAVTRSALERARRGEGPTLVEAFTYRMGAHTTSDDPTK 315 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR EE + DPI ++R L A E ++ + E ++ +P+ Sbjct: 316 YRADEERAAWEAK-DPILRLRTYLEKAGHADEAFFTALDEESETLGKRVREAVRAMPDPE 374 Query: 355 PAELY 359 P L+ Sbjct: 375 PMALF 379 >gi|111219576|ref|YP_710370.1| pyruvate dehydrogenase E1 component subunit alpha [Frankia alni ACN14a] gi|111147108|emb|CAJ58753.1| Pyruvate dehydrogenase E1 component, alpha subunit [Frankia alni ACN14a] Length = 431 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 101/350 (28%), Positives = 170/350 (48%), Gaps = 18/350 (5%) Query: 16 ALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGM 75 A P + ++VD +D+P V++ ++ YR M+L+RR +E+A L Sbjct: 46 AAGPEAGSLDGELTAVD-IDLPAY----VADLTDDELFGLYRDMVLVRRMDEEATSLQRQ 100 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 G +G + L GQEA VG +L D +YREHG GVD + ++A G G Sbjct: 101 GELGLWASL-RGQEAAQVGSGRALGPDDMAFPSYREHGVAWCRGVDPAAVLAIFRGVNLG 159 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG 195 G + H F+ + +VG+Q TG A + RS + FGDGA+++G Sbjct: 160 ---GWDPATHGFALYSI------VVGSQTLHATGYAMGMAWDRSAGAAIAYFGDGASSEG 210 Query: 196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIR 255 V E+F A+++ +++ +NNQ+A+ + +R +T R F P ++VDG D+ Sbjct: 211 DVNEAFGWASVYRAPLVFFCQNNQWAI-SEPTRRQTRTEIFHRAAGFGFPSVRVDGNDVL 269 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQV 314 A A A+A RA +GP+++E +TYR H+ + DP YR+ E+ E S DP++++ Sbjct: 270 ACLAVSRWALATARAGRGPVLVEAVTYRMGAHTTADDPTRYRSPVEL-EAWSRRDPLDRM 328 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 R L E + + + + + +PDP L+ + + Sbjct: 329 RAHLAACGLLGEERDRHLALEADAFAHELRNRCTAMLDPDPTSLFDHVQV 378 >gi|311748442|ref|ZP_07722227.1| 2-oxoisovalerate dehydrogenase E1 component, beta subunit [Algoriphagus sp. PR1] gi|126576956|gb|EAZ81204.1| 2-oxoisovalerate dehydrogenase E1 component, beta subunit [Algoriphagus sp. PR1] Length = 669 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 89/311 (28%), Positives = 160/311 (51%), Gaps = 2/311 (0%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 F+ + + L Y ++L R+ EEK L G + + GQEA+ VG+ +L Sbjct: 13 FDRKNLSDQNLLEIYESLILPRKIEEKMLILLRQGKISKWFS-GWGQEAISVGVVNALKA 71 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 + ++ +R G + K+ A+ G++ G +KG+ S H S ++ G +G Sbjct: 72 DEYILPMHRNLGVFTGRQMPLEKLFAQFQGKKSGFTKGRDRSFHFGSIEHHIVGMISHLG 131 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+++ GIA A+K + K+ +V GDGA+++G +E N+AA+W L VI+VIE+N Y Sbjct: 132 PQLAIADGIALASKLSKEKKVTLVFSGDGASSEGDFHEGLNVAAVWKLPVIFVIEHNGYG 191 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T A NF+++G + I +++ G ++ V T+ R + P+++E +T Sbjct: 192 LSTPSEEQFAFKNFTEKGPGYGIETIKIQGNNVLEVFNTIKILAEDIRKNPRPVLVEAIT 251 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 +R RGH + Y ++ + E S DP+E + L + E +I+ +K IN Sbjct: 252 FRMRGHEEASGTKYVPKQLMAEW-SKLDPVENYERYLEESGVLVEKVKSKIQQKAKKEIN 310 Query: 342 NSVEFAQSDKE 352 +++E A S+ E Sbjct: 311 DALEIAFSEAE 321 >gi|89099272|ref|ZP_01172150.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus sp. NRRL B-14911] gi|89086118|gb|EAR65241.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus sp. NRRL B-14911] Length = 331 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 100/314 (31%), Positives = 154/314 (49%), Gaps = 9/314 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQM 105 + ++ L Y MLL RR +E+ L G + F C GQEA VG +L T+ D + Sbjct: 11 LSDDKVLEMYETMLLARRIDERMWLLNRSGKIP-FVISCQGQEAAQVGAAFALDTDKDYV 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGA 162 + YR+ G +L G+ A+++M L+G GG H +N G V Sbjct: 70 LPYYRDMGVVLTFGMTATELM--LSGFAKAEDPNSGGRQMPGHFGQKRNRIVTGSSPVTT 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV GIA A K D + FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 128 QVPHAVGIALAGKMEGKDLVTFTTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + A N + R V + +PG+ VDG D V + +A R +GP ++E ++Y Sbjct: 188 SVPIEKQLACENVADRAVGYGMPGVTVDGNDPLEVYKAVKEAADRGRRGEGPTLVETVSY 247 Query: 283 RYRGHSM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D +YR +E+ E ++ DPI L ++ KEI V K++N Sbjct: 248 RLTPHSSDDDDRSYRAPDEVAEAKTK-DPIITFGAYLKETGLMNDELEKEINDRVMKLVN 306 Query: 342 NSVEFAQSDKEPDP 355 + E+A++ DP Sbjct: 307 EATEYAENAPYADP 320 >gi|51699504|dbj|BAD38879.1| putative dehydrogenase alpha subunit [Streptomyces carzinostaticus] Length = 385 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 95/321 (29%), Positives = 155/321 (48%), Gaps = 13/321 (4%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E+ + E + YR M++ R + +A L G +G + L GQEA VG +L Sbjct: 49 EIPGYAPELLRTLYRDMVISRGLDTEATALQRQGELGLWPPLA-GQEAAQVGSAHALRPD 107 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + +YREHG GVD ++ G G + H+++ +VGA Sbjct: 108 DYVFPSYREHGVAWCRGVDPVDVVRLFRGVTNGGWDPRESGFHLYTL---------VVGA 158 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 TG A + SD V FGDGA+++G V E+F AA+ + V++ +NNQ+A+ Sbjct: 159 HTLHATGYAMSLAKNGSDAAAVAYFGDGASSEGDVAEAFTFAAVHDAPVLFFCQNNQWAI 218 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 V+R + +R + PG++VDG D+ AV A A+ + R+ GP ++E TY Sbjct: 219 SEPVTRQQ-RGPLYRRAHGYGFPGVRVDGNDVLAVHAVTRFALDHIRSGNGPFLVEAFTY 277 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R H+ S DP YRT+ E+ R+ DPI ++R L A+ +E+E R + + Sbjct: 278 RMGAHTTSDDPTRYRTQTELEYWRAR-DPIARLRVHLTEAGHAAPSFFEEVEEQARDLAH 336 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 ++ +P P ++ + Sbjct: 337 RVRREVRNMPDPQPPAVFDHV 357 >gi|239942602|ref|ZP_04694539.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces roseosporus NRRL 15998] gi|239989061|ref|ZP_04709725.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces roseosporus NRRL 11379] Length = 386 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 100/347 (28%), Positives = 163/347 (46%), Gaps = 19/347 (5%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSA------YRLMLLIRRFEEKAGQLY 73 + +AK+ ++ V + EG V + +LSA YR M+L RRF+ +A L Sbjct: 19 TSAAKKPQSAEPQLVQLLTPEGERVEHPDYSIDLSAEELRGLYRDMVLTRRFDAEATALQ 78 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQ 133 G +G + L +GQEA +G +L + D + YREHG GVD + ++ G Sbjct: 79 RQGELGLWASL-LGQEAAQIGSGRALRDDDYVFPTYREHGVAWCRGVDPTNLLGMFRGVN 137 Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 G + H+++ ++G+Q TG A +D + FGDGA++ Sbjct: 138 HGGWDPNSNNFHLYTI---------VIGSQTLHATGYAMGVAKDGADSAVIAYFGDGASS 188 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 QG V ESF +A++N V++ +NNQ+A+ R + + +R + PG++VDG D Sbjct: 189 QGDVAESFTFSAVYNAPVVFFCQNNQWAISEPTERQT-RVPLYQRAQGYGFPGVRVDGND 247 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIE 312 + A A A+ R +GP ++E TYR H+ S DP YR EE + DPI Sbjct: 248 VLACLAVTRSALERARRGEGPTLVEAFTYRMGAHTTSDDPTKYRADEERAAWEAK-DPIL 306 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 ++R L A E ++ + E ++ +P+P L+ Sbjct: 307 RLRTYLEKAGHADEAFFTALDEESETLGKRVREAVRAMPDPEPMALF 353 >gi|219850605|ref|YP_002465038.1| Pyruvate dehydrogenase (acetyl-transferring) [Chloroflexus aggregans DSM 9485] gi|219544864|gb|ACL26602.1| Pyruvate dehydrogenase (acetyl-transferring) [Chloroflexus aggregans DSM 9485] Length = 321 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 91/305 (29%), Positives = 154/305 (50%), Gaps = 2/305 (0%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 A+ M L R +++ L+ + G IG EA+ V MSL D + +R+ G Sbjct: 12 AHYWMRLTRALDDRGTFLHKQSKIVGGYFSQIGHEALSVAAAMSLGPRDIIAPMHRDLGA 71 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMH-MFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 L G+ +I+A+ GR+ G+++G+ ++H M G G + A + TG+A Sbjct: 72 YLVRGLTPRRILAQWLGRETGVTRGRDANLHGMGDLSLGIIGFISHLPASTGVITGVAHG 131 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K + ++ + FGDG+A+QG +E+ N A+++ L ++ + ENN+YA T +SR A Sbjct: 132 IKLKGEPRVAMCFFGDGSASQGLAHEAMNWASVFKLPMVIICENNRYAYSTPLSRQMAIE 191 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + ++R +N+PG+ VDG D AV +AV RA GP IE T R RGH++ D Sbjct: 192 HIAQRAAGYNMPGVIVDGNDFVAVYQAATEAVERARAGGGPTFIECKTMRMRGHAIHDNM 251 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 Y ++ + + DPI ++ L + L + + ++ + FA++ P Sbjct: 252 AYVPKDLLAAWEAR-DPIARIEAELRARGLLDDAKLAALLTKIEAELDEAQAFAEASPYP 310 Query: 354 DPAEL 358 DPA L Sbjct: 311 DPATL 315 >gi|261417763|ref|YP_003251445.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Geobacillus sp. Y412MC61] gi|297529455|ref|YP_003670730.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Geobacillus sp. C56-T3] gi|319767425|ref|YP_004132926.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Geobacillus sp. Y412MC52] gi|261374220|gb|ACX76963.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Geobacillus sp. Y412MC61] gi|297252707|gb|ADI26153.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Geobacillus sp. C56-T3] gi|317112291|gb|ADU94783.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Geobacillus sp. Y412MC52] Length = 331 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 146/306 (47%), Gaps = 5/306 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 L Y MLL R+ +E+ L G + F C GQEA VG +L D ++ YR+ Sbjct: 17 LEMYETMLLARKLDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDRTKDYVLPYYRD 75 Query: 112 HGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 G +L G+ ++M A + S G+ H KN G V QV G Sbjct: 76 VGVVLTFGMTPRELMLAAFAKAEDPNSGGRQMPGHFGKKKNRIVTGSSPVTTQVPHAVGF 135 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ +S+ Sbjct: 136 ALAAKMEKKDFVAFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAISVPISKQL 195 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A S R + + +PG VDG D V + +A R +GP +IE +TYR HS Sbjct: 196 ACEKVSDRAIGYGMPGYTVDGTDPLEVYRVVKEAADRARRGEGPTLIEAVTYRLTSHSSD 255 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D YRT EE+ E R+ DPI L ++ +EI+ V K +N + ++A+ Sbjct: 256 DDHRVYRTEEELAEARAK-DPIVSFANYLKETGVLTDEQDEEIQARVMKEVNEATDYAEK 314 Query: 350 DKEPDP 355 +P Sbjct: 315 APYAEP 320 >gi|325284179|ref|YP_004256720.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Deinococcus proteolyticus MRP] gi|324315988|gb|ADY27103.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Deinococcus proteolyticus MRP] Length = 369 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 153/312 (49%), Gaps = 7/312 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 YR M R F+ K L G F G EA VG+ + G D YR+H Sbjct: 37 YREMFRAREFDRKLITLLRQGRTS-FYAQAHGMEATQVGLARACRAGHDWWWLYYRDHPI 95 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +L GV +I++++ G + KG+ H + + + +Q+ TG A A Sbjct: 96 MLTLGVPMLQIISQIMGTNTDVCKGRQMPHHFSAPSHNVVSISSSIASQIPPATGTAMAQ 155 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY +D+I V FGDGA ++G + N+AA+ V++V ENNQ+A+ T V+ +A Sbjct: 156 KYLGTDEITVCTFGDGATSEGDWHAGINMAAVKQAPVMFVCENNQWAISTGVTDQTASET 215 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-- 292 + ++ IPG VDG D+ AV M R+ +GP I+E LTYR HS +D Sbjct: 216 IHIKARAYGIPGYYVDGNDVVAVLEVMSHVAERIRSGEGPAIVEALTYRVGSHSNADADA 275 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE-IEMNVRKIINNSVEFAQSD 350 +YRTREE+ E + DPI++V K L H + KE + V +N ++E A + Sbjct: 276 EKHYRTREEV-EQWTGRDPIDRVEKLLAHLGSPVTSEEKEALAQEVNAEVNAAIEEAAAS 334 Query: 351 KEPDPAELYSDI 362 PD ++ D+ Sbjct: 335 GTPDWDVMFQDV 346 >gi|319651475|ref|ZP_08005603.1| 3-methyl-2-oxobutanoate dehydrogenase [Bacillus sp. 2_A_57_CT2] gi|317396790|gb|EFV77500.1| 3-methyl-2-oxobutanoate dehydrogenase [Bacillus sp. 2_A_57_CT2] Length = 331 Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 150/308 (48%), Gaps = 9/308 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + E+ L Y MLL RR +E+ L G + F C GQEA VG +L E D + Sbjct: 11 LSDEKVLEMYETMLLARRIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYV 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGA 162 + YR+ G +L G+ A ++M L+G GG H KN G V Sbjct: 70 LPYYRDMGVVLTFGMTAKELM--LSGFAKAEDPNSGGRQMPGHFGQKKNRIVTGSSPVTT 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV G+A K D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 128 QVPHAVGVALGGKLEGKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + A N S R + + +PG+ VDG D V + +A R +GP ++E ++Y Sbjct: 188 SVPIEKQLACENVSDRAIGYGMPGITVDGNDPLEVYKAVKEAADRGRRGEGPTLVETISY 247 Query: 283 RYRGHSM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D +YR +E+ E ++ DPI L N + KEI + K++N Sbjct: 248 RLTPHSSDDDDRSYRAPDEVAEAKTK-DPIITFGAYLKENGVMDDAIEKEINDRIMKLVN 306 Query: 342 NSVEFAQS 349 + ++A++ Sbjct: 307 EATDYAEN 314 >gi|167624158|ref|YP_001674452.1| 3-methyl-2-oxobutanoate dehydrogenase [Shewanella halifaxensis HAW-EB4] gi|167354180|gb|ABZ76793.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella halifaxensis HAW-EB4] Length = 392 Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 82/283 (28%), Positives = 146/283 (51%), Gaps = 2/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA I+G +L +GD ++ YREH I G + M ++ + KG+ Sbjct: 78 FYMTCTGEEASIIGSTAALDDGDVILAQYREHAAIRYRGFTTEQFMNQMFSNEKDFGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + + + Q+ TG+A+A K + I + FG+GAA++G + Sbjct: 138 QMPIHYGSQELNYQTISSPLATQIPQATGVAYALKRQGKRNIAICYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ N VI+ NN YA+ T + RGV + + ++VDG D+ AV A Sbjct: 198 LNMAAVLNSPVIFFCRNNGYAISTPTEEQFKGNGIASRGVGYGMHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A AY H P++IE +TYR HS S DP+ YR+++E + + HDP+++ + ++ Sbjct: 258 TQQARAYALEHNAPVLIEAMTYRLGAHSSSDDPSGYRSKDEEAKWQ-QHDPVKRFKLWMI 316 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + W +E + ++ + R+ + + ++ A+ P + D+ Sbjct: 317 NKGWMNEQEDADLYVKYREEVLSELKVAEKVPTPHLDSIIEDV 359 >gi|258655410|ref|YP_003204566.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Nakamurella multipartita DSM 44233] gi|258558635|gb|ACV81577.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Nakamurella multipartita DSM 44233] Length = 426 Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 32/362 (8%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSA------YRLMLLIRRFEEKAGQLYG 74 ++ RA + D V + EG + E+SA YR M+L+RRF+ + L Sbjct: 45 IAGLRATSHGEDLVQVLSPEGVFTPREDFPIEISADLLRGLYRDMVLVRRFDREGNALQR 104 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G + + L +GQEA VG +L D +YREHG GVD ++++ Sbjct: 105 QGQLNIWVPL-LGQEAAQVGAGRALRPADMAFPSYREHGVAWCRGVDPTELL-------- 155 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR-------------SDK 181 GI +G + GF G ++G QV TG A K+ +D+ Sbjct: 156 GIFRGTD-HCGWDPKRTGFNGYTIVIGNQVLNATGYAMGQKFDGVIGSRADGANGAGTDE 214 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 +V FGDGA +QG V+E AA ++ +++ +NNQ+A+ V+R S + +R Sbjct: 215 ATIVFFGDGATSQGDVHEGMVFAAAFDAPIVFYCQNNQWAISEPVARQS-RVPLWERSTG 273 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREE 300 + PG++VDG D+ A A A+ CR+ GP++IE TYR H+ S DP YR E Sbjct: 274 YGFPGVRVDGNDVLACLAVTRWALDECRSGNGPVMIEAFTYRMDAHTTSDDPTRYRMAAE 333 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 E DPIE+VR L A + ++ ++ F +P P ++S Sbjct: 334 -EEHWKLLDPIERVRAHLAREGLADQAFFDQVGAEADELAARFRSFCVQMPKPAPERMFS 392 Query: 361 DI 362 + Sbjct: 393 HV 394 >gi|322421395|ref|YP_004200618.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Geobacter sp. M18] gi|320127782|gb|ADW15342.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacter sp. M18] Length = 351 Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 94/309 (30%), Positives = 156/309 (50%), Gaps = 12/309 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y LMLL R F+E+A L G +G + + GQEA VG +LT+ D + ++RE G Sbjct: 40 YELMLLSRIFDERAIALQREGRIGTYPSIQ-GQEAAQVGSAFALTQKDWVFPSFREMGAH 98 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G +I+ GG + + H+ + V +Q+ G A A + Sbjct: 99 LTLGYPIPQILMYW----GGDERAQKVPSHL-----NIFPFCVAVASQIPQAVGAALAAR 149 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 YRR V FGDGA ++G +E N+A ++NL ++++ +NNQ+A+ + +A + Sbjct: 150 YRRDPVAVVTYFGDGATSKGDFHEGMNMAGVFNLPLVFICQNNQWAISVPLKSQTASASL 209 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-N 294 +++ +++ G+QVDG DI AV +A+ R+ GP IE LTYR H+ +D A Sbjct: 210 AQKAIAYGFEGVQVDGNDIFAVYRATRQALEKARSGAGPTFIECLTYRMADHTTADDAGR 269 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR+ EE+ R+ DPI ++ + L S +E I++ + ++ P Sbjct: 270 YRSPEEVATWRA-RDPILRLERFLEGRGVWSPEKREEAAAKAAGIVDEGIREMEAQPPPA 328 Query: 355 PAELYSDIL 363 AEL+ ++L Sbjct: 329 AAELFEEVL 337 >gi|196249478|ref|ZP_03148176.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. G11MC16] gi|196211235|gb|EDY05996.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. G11MC16] Length = 359 Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 87/274 (31%), Positives = 146/274 (53%), Gaps = 12/274 (4%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 +++ F+ E L AYR M R +E+ ++ G +G + GQEA +G ++L + Sbjct: 25 KIAAFSDEWLLDAYRAMRRARVVDERLLRMQRQGRIGTYAPFS-GQEAAQIGSVLALQKD 83 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + +YRE L G+ + + GR G K +++F T+ I+ A Sbjct: 84 DWIFPSYREVAVCLTHGMPLEQFFHYVRGRLSG--KRMPEELNIFPTQI-------IIAA 134 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q G A+A K + + V FGDGA ++G +E+ N AA++N+ VI+ +NNQYA+ Sbjct: 135 QTLHAVGCAWATKLKGESHVSVAYFGDGATSEGDFHEAMNFAAVYNVPVIFFCQNNQYAI 194 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 ++ +A +++ +++ + G+ VDG D+ AV TM +AV R +GP++IE LTY Sbjct: 195 SVPYAKQTASRTIAQKALAYGMKGVLVDGNDVLAVYETMKQAVEAARRGEGPMLIEALTY 254 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVR 315 R H+ + DP YR EE+ R DP+ ++R Sbjct: 255 RLGPHTTADDPTKYRHPEEVETWRRK-DPLHRLR 287 >gi|119774845|ref|YP_927585.1| 3-methyl-2-oxobutanoate dehydrogenase [Shewanella amazonensis SB2B] gi|119767345|gb|ABL99915.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella amazonensis SB2B] Length = 392 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 82/283 (28%), Positives = 145/283 (51%), Gaps = 2/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA I+G +L E D ++ YREH + G + M ++ + + KG+ Sbjct: 78 FYMTCTGEEAAILGSVAALDEKDVILAQYREHAALRYRGFTTEQFMNQMFSNEKDLGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H + + +G Q+ TG+ ++ K + + + FG+GAA++G + Sbjct: 138 QMPIHYGTAALHYQTISSPLGTQIPQATGVGYSLKMKGERNVAICYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ VI+ NN YA+ T A + RGV + + ++VDG D+ AV A Sbjct: 198 MNMAAVLKSPVIFFCRNNGYAISTPTEEQFAGNGIASRGVGYGMHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A AY H P++IE +TYR HS S DP+ YR++EE + R HDP+++ + ++ Sbjct: 258 TQQARAYALEHNAPVLIEAMTYRLGAHSTSDDPSGYRSKEEEAKWR-EHDPVKRFKLWMI 316 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + W +E + + + R+ + +V+ A+ P E+ D+ Sbjct: 317 NKGWLAEANDEALYERYREEVLAAVKVAEKIPAPRIDEIIEDV 359 >gi|124005439|ref|ZP_01690280.1| 2-oxoisovalerate dehydrogenase beta subunit [Microscilla marina ATCC 23134] gi|123989261|gb|EAY28839.1| 2-oxoisovalerate dehydrogenase beta subunit [Microscilla marina ATCC 23134] Length = 668 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 86/313 (27%), Positives = 159/313 (50%), Gaps = 2/313 (0%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 F+ ++ + L Y+ +L R EEK L G + + IGQEA+ VG ++L Sbjct: 9 FDRKKYKDDLLLDFYKYILKPRMIEEKMLILLRQGKISKWFS-GIGQEAIAVGSTLALEP 67 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D ++ +R G + G+ ++ A+ G+ G +KG+ S H S ++ G +G Sbjct: 68 DDYILPMHRNLGVFTSRGIPLERLFAQFQGKDLGFTKGRDRSFHFGSNEHHIIGMISHLG 127 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+S+G+G+A A+ K+ + GDG ++G+ +E+ N+AA+WNL +I++IENN Y Sbjct: 128 PQLSVGSGLALADLLNNDKKVTIAFSGDGGTSEGEFHEALNVAAVWNLPIIFMIENNGYG 187 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T V+ +G+ + + +QVDG ++ V +T+ + R PI+IE LT Sbjct: 188 LSTPVNEQYKCEWLKDKGIGYGMEAVQVDGNNLLEVYSTVRHYASELRQDPRPILIEALT 247 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 +R RGH + Y + + + + DP+ L ++ ++EI ++K I+ Sbjct: 248 FRMRGHEEASGTKYVPK-HLMDAWAKKDPVINYETFLKRQGVLNDHIIEEIREYIKKEID 306 Query: 342 NSVEFAQSDKEPD 354 + A ++ P+ Sbjct: 307 EGLATAYAEPLPE 319 >gi|126090145|ref|YP_001041626.1| hypothetical protein Sbal_4508 [Shewanella baltica OS155] gi|126174438|ref|YP_001050587.1| 3-methyl-2-oxobutanoate dehydrogenase [Shewanella baltica OS155] gi|125997643|gb|ABN61718.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella baltica OS155] gi|125999801|gb|ABN63871.1| hypothetical protein Sbal_4508 [Shewanella baltica OS155] Length = 392 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 84/283 (29%), Positives = 145/283 (51%), Gaps = 2/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA IVG +L + D ++ YREH + G + M ++ + + KG+ Sbjct: 78 FYMTCTGEEAAIVGSVAALVQEDVILAQYREHAALRYRGFTTEQFMNQMFSNEKDLGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + + Q+ TG+ ++ K + K+ V FG+GAA++G + Sbjct: 138 QMPIHYGSAALHYQTISSPLATQIPQATGVGYSLKMQGKRKVAVCYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ VI+ NN YA+ T A + RGV + + ++VDG D+ AV A Sbjct: 198 LNMAAVLKCPVIFFCRNNGYAISTPTEEQFAGNGIASRGVGYGMHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A AY H P++IE +TYR HS S DP+ YR+++E + + HDP+++ + L+ Sbjct: 258 TQQARAYAIEHNAPVLIEAMTYRLGAHSSSDDPSGYRSKDEEAKWQ-QHDPVKRFKLWLI 316 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + W +E D ++ R+ + +V+ A+ P E+ D+ Sbjct: 317 NKGWLAEADDVKLHEKYREEVLAAVKVAEKIPVPMLDEIIEDV 359 >gi|271970152|ref|YP_003344348.1| pyruvate dehydrogenase [Streptosporangium roseum DSM 43021] gi|270513327|gb|ACZ91605.1| Pyruvate dehydrogenase (acetyl-transferring) [Streptosporangium roseum DSM 43021] Length = 363 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 99/350 (28%), Positives = 168/350 (48%), Gaps = 19/350 (5%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSA------YRLMLLIRRFEEKAGQLY 73 + A A + + V + EG V + + +L+ YR ++L+RR + +A L Sbjct: 2 TADAPHGAEAPPELVQLLTPEGERVEHPDYDIDLTPEEIRGLYRDLVLVRRVDLEAVALQ 61 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQ 133 G +G + L +GQEA +G +L E D YREHG GVD ++ G Sbjct: 62 RQGELGIWASL-LGQEAAQIGSGRALAETDMAFPTYREHGVAWCRGVDPVNLLGLFRGVN 120 Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 G + H+++ ++G+Q G A + ++ +V FGDGA + Sbjct: 121 HGGWDPAEHNFHLYTI---------VIGSQTLHAVGYAMGVQRDSAEAATIVYFGDGATS 171 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 QG V ESF A+++N V++ +NNQ+A+ + + S + +R F PG++VDG D Sbjct: 172 QGDVNESFIWASVFNAPVVFFCQNNQWAISEPLEKQS-RIPLYRRASGFGFPGVRVDGND 230 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIE 312 + A A KA+A R+ +GP++IE TYR H+ S DP YR E+ + DPIE Sbjct: 231 VLACLAVTRKALADARSGQGPMLIEAFTYRMGAHTTSDDPTRYRVAGELEAWKLK-DPIE 289 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +VR + N+ A + I+ + + + + +P+P ++ + Sbjct: 290 RVRAYMFKNQLADQEFFDAIDAEADDLGRDVRKRCLALPDPEPLAIFDHV 339 >gi|284166853|ref|YP_003405132.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Haloterrigena turkmenica DSM 5511] gi|284016508|gb|ADB62459.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Haloterrigena turkmenica DSM 5511] Length = 375 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 94/336 (27%), Positives = 166/336 (49%), Gaps = 23/336 (6%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 LEG +V + + ++ + Y M L+R F+E+A L G +G + L GQE +G + Sbjct: 22 LEGADVPDLSADELVEMYAQMRLVRHFDERAVSLQRQGRMGTYPPLS-GQEGSQIGSAHA 80 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L E D + +YREHG L GV + + G + G + ++MFS Sbjct: 81 LAEEDWVFPSYREHGVGLVRGVSLERTLLYWMGHERGNYIPE--DVNMFSVAVP------ 132 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + Q+ TG A+A+K + +K + FGDGA ++G +E N A +++ ++ NN Sbjct: 133 -IATQIPHATGAAWASKLQGEEKAFLCYFGDGATSEGDFHEGLNFAGVFDTPNVFFCNNN 191 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG----- 273 Q+A+ R +A +++ ++ G+QVDGMD AV +AV + Sbjct: 192 QWAISVPRERQTASATLAQKAEAYGFEGVQVDGMDPLAVYKVTKEAVEKAKDPDSVADDS 251 Query: 274 ------PIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASE 326 P +IE + YR+ H+ + DP+ YR EE+ ++ DPI ++ L + + Sbjct: 252 PGDATRPTLIEAVQYRFGAHTTADDPSVYRDEEEVERWKAK-DPIPRLESYLRNEGILDD 310 Query: 327 GDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + I+ VR + +++E A+S + PDP E+++ + Sbjct: 311 DRVDAIDERVRADVADAIETAESIERPDPEEIFAHV 346 >gi|261313855|ref|ZP_05953052.1| LOW QUALITY PROTEIN: dehydrogenase E1 component [Brucella pinnipedialis M163/99/10] gi|261302881|gb|EEY06378.1| LOW QUALITY PROTEIN: dehydrogenase E1 component [Brucella pinnipedialis M163/99/10] Length = 478 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 89/259 (34%), Positives = 135/259 (52%), Gaps = 24/259 (9%) Query: 97 MSLTEGDQMITAYREH--------GHILACGVD------------ASKIMAELTGRQGGI 136 +S+ DQ+ ++R H G++ G+D A + +AE+ G G Sbjct: 31 LSMRPSDQINGSHRAHHQFLAKALGYVAQKGIDPKAAFDQDIRTLAQRTLAEILGLSQGF 90 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 +G+GGSMH+ ++G G + IVG V + G A+A++ + FGDGA N G Sbjct: 91 CRGRGGSMHLRWAESGNLGTNAIVGGGVPMAAGAAWAHRRAGKGDVVYTYFGDGATNIGS 150 Query: 197 VYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA 256 V E+ N+AA W L + + IENN+YA+ T V +A+ S RG++F IP +VDGMD A Sbjct: 151 VLETMNLAAAWKLPICFFIENNRYAVSTHVEEVTAEPRLSSRGLAFGIPSFKVDGMDPIA 210 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN---YRTREEINEMRSNHDPIEQ 313 V ++A A RA GP IIE YRY + P + YR+++E E R DP++ Sbjct: 211 VWLASEEANAIMRAGNGPTIIEADVYRYFHQNGPLPGSAFGYRSKDEEAEWR-GRDPLDA 269 Query: 314 VRKRLLHNKWASEGDLKEI 332 + K LL + E +K + Sbjct: 270 LAKTLLERQALGEDAIKAL 288 >gi|186470862|ref|YP_001862180.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Burkholderia phymatum STM815] gi|184197171|gb|ACC75134.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Burkholderia phymatum STM815] Length = 365 Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 148/302 (49%), Gaps = 14/302 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M+L R F+ KA L G +G F +GQEA+ VG+ ++ D + +YR+H Sbjct: 36 LPLYRAMVLTRAFDTKAVALQRTGQLGTFAS-SVGQEAIGVGVASAMHPEDVLFPSYRDH 94 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L GV M E GG +G S+ F N +G QV G A+ Sbjct: 95 AAQLLRGV----TMTESLLYWGGDERGSNFSVARFDFPNCV-----PIGTQVCHAAGAAY 145 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + R+ ++ V GDGA ++G YE+ N A +W ++ VI NN +A+ SR SA Sbjct: 146 AFRLRKEPRVAVALLGDGATSKGDFYEAMNFAGVWGAPLVLVINNNHWAISVPRSRQSAA 205 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ I G+QVDG D+ AV + A+A R GP +IE L+YR H+ +D Sbjct: 206 QTLAQKAIAAGIDGLQVDGNDLIAVHHVVAAALAKARRGDGPTLIEALSYRLGDHTTADD 265 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLH-NKW--ASEGDL-KEIEMNVRKIINNSVEFAQ 348 A E+ + +P+ ++R L+ N W A E +L K V + ++ + A Sbjct: 266 ATRYRDAEVVSRQWEAEPLRRLRAYLIRMNVWDKAREEELGKTCHAQVTQAVDAYLAIAP 325 Query: 349 SD 350 D Sbjct: 326 PD 327 >gi|138896775|ref|YP_001127228.1| pyruvate dehydrogenase E1 (lipoamide) subunit alpha [Geobacillus thermodenitrificans NG80-2] gi|134268288|gb|ABO68483.1| Pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Geobacillus thermodenitrificans NG80-2] Length = 365 Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 87/274 (31%), Positives = 146/274 (53%), Gaps = 12/274 (4%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 +++ F+ E L AYR M R +E+ ++ G +G + GQEA +G ++L + Sbjct: 31 KIAAFSDEWLLDAYRAMRRARVVDERLLRMQRQGRIGTYAPFS-GQEAAQIGSVLALQKD 89 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + +YRE L G+ + + GR G K +++F T+ I+ A Sbjct: 90 DWIFPSYREVAVCLTHGMPLEQFFHYVRGRLSG--KRMPEELNIFPTQI-------IIAA 140 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q G A+A K + + V FGDGA ++G +E+ N AA++N+ VI+ +NNQYA+ Sbjct: 141 QTLHAVGCAWATKLKGESHVSVAYFGDGATSEGDFHEAMNFAAVYNVPVIFFCQNNQYAI 200 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 ++ +A +++ +++ + G+ VDG D+ AV TM +AV R +GP++IE LTY Sbjct: 201 SVPYAKQTASRTIAQKALAYGMKGVLVDGNDVLAVYETMKQAVEAARRGEGPMLIEALTY 260 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVR 315 R H+ + DP YR EE+ R DP+ ++R Sbjct: 261 RLGPHTTADDPTKYRHPEEVETWRRK-DPLHRLR 293 >gi|260907141|ref|ZP_05915463.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brevibacterium linens BL2] Length = 368 Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 91/310 (29%), Positives = 147/310 (47%), Gaps = 16/310 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L+RRFE + L G + + GQEA VG +L D + YR+ + Sbjct: 47 YRQMVLVRRFEAQVTHLTRQGRLATYPS-AAGQEAAEVGATTALAPNDWLFPTYRDSAAL 105 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFA 173 L GV ++I+A G H ++ + Q TG A A Sbjct: 106 LTRGVPVAEILAAFRG-----------DWHCGFDPREYHASPAATPLATQTLHATGFAMA 154 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K + D + GDGA+++G +E+FN A++W ++V++NNQYA+ T + + T Sbjct: 155 AKLKGEDAATLTFLGDGASSEGDTHEAFNFASVWQTPTVFVLQNNQYAISTPLREQTNAT 214 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DP 292 + R + +PG++VDG D+ AV A + A+ R GP +IE LTYR H+ S DP Sbjct: 215 MLADRAAGYGMPGLRVDGNDVAAVFAAVAAALERGRNGDGPTLIECLTYRMESHTNSDDP 274 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR EE+ + DPI+++ K L + + E+ + + + + E Sbjct: 275 TKYRDSEEVEHWK-QFDPIDRLEKYLRTTGALDDSTVAEVAEAAETLAASVRDAMNQEAE 333 Query: 353 PDPAELYSDI 362 DP EL++ + Sbjct: 334 VDPRELFAHV 343 >gi|51891549|ref|YP_074240.1| pyruvate dehydrogenase E1 alpha subunit [Symbiobacterium thermophilum IAM 14863] gi|51855238|dbj|BAD39396.1| pyruvate dehydrogenase E1 alpha subunit [Symbiobacterium thermophilum IAM 14863] Length = 368 Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 90/282 (31%), Positives = 147/282 (52%), Gaps = 14/282 (4%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMITA 108 +Q YR M+ +R F+++ L G +G F GQEA VG L + D + Sbjct: 37 DQLKDVYRKMVYLRVFDQRCLNLQRQGRMGTFAPFS-GQEASQVGSAYLLRPDRDWIFPT 95 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HG + GV I+ G + G +G + S + Q+ Sbjct: 96 YRDHGAMHVMGVPLVNILRYFMGDEQGSHAPQGVNAFPISIP---------IATQLLHAV 146 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G A+A + + D + V GDG + G +E+ N AA++N+ VI+ I+NN+YA+ T SR Sbjct: 147 GAAWAGRIKGEDTVAVGYAGDGGTSPGDFHEALNFAAVFNVPVIFFIQNNRYAISTPNSR 206 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++R + ++I G++VDG D+ AV A M +A+ R+ GP ++E +T+RY H+ Sbjct: 207 QFKTPTIAQRALGYDIAGVRVDGQDVLAVLAVMHEAIERARSGGGPTLVESVTFRYGPHT 266 Query: 289 MS-DPANYRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGD 328 S DP YR++EE+ E ++ DPIE++R L+ +W+ D Sbjct: 267 TSDDPKRYRSQEELEEWQA-RDPIERLRLYLVSQGQWSDSDD 307 >gi|331700312|ref|YP_004336551.1| pyruvate dehydrogenase E1 component subunit alpha [Pseudonocardia dioxanivorans CB1190] gi|326955001|gb|AEA28698.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Pseudonocardia dioxanivorans CB1190] Length = 415 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 93/322 (28%), Positives = 154/322 (47%), Gaps = 25/322 (7%) Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 S YR M+L+RR + + L G +G + L +GQEA +G +L D + +YREHG Sbjct: 68 SLYRDMVLVRRADREGNALQRQGQLGIWVPL-LGQEAAQIGAGRALLPTDMVFPSYREHG 126 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 G+D + ++ G G H+++ ++G Q TG A Sbjct: 127 VAWCRGIDPTDLLGIFRGTDHGSWDPLEKRFHLYTI---------VIGNQCLNATGYAMG 177 Query: 174 NKYR------------RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 ++ D+ + FGDGA +QG V+E F AA ++ V++ +NNQ+A Sbjct: 178 QRFEGRVGNGDGAPEGSPDEATMCFFGDGATSQGDVHEGFVWAAAYDAPVVFYCQNNQWA 237 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + +SR + + +R + PG++VDG D+ A A A+ CR+ GP++IE T Sbjct: 238 ISVPLSRQT-RVPLHERARGYGFPGVRVDGNDVIACLAVSRWALEECRSGNGPVLIEAFT 296 Query: 282 YRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YR H+ S DP+ YR +E+ E+ DPIE+VR L+ + + ++ Sbjct: 297 YRMDAHTTSDDPSRYRLADEL-ELWKLKDPIERVRVNLVREHGVGQEFFDGVAAEADELA 355 Query: 341 NNSVEFAQSDKEPDPAELYSDI 362 EF + EP P ++S++ Sbjct: 356 ARLREFCLAMPEPAPDRMFSEV 377 >gi|295695284|ref|YP_003588522.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Bacillus tusciae DSM 2912] gi|295410886|gb|ADG05378.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Bacillus tusciae DSM 2912] Length = 361 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/316 (28%), Positives = 160/316 (50%), Gaps = 15/316 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + +++ + YR M+L R F+E+A L G +G + GQEA +G +L + D Sbjct: 26 VPDLAEDRLVGMYRGMVLARTFDERALNLQRQGRIGTYAPFS-GQEAAQIGSFAALEKDD 84 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +YRE ++ G+ + + G G + M ++ +Q Sbjct: 85 WVFPSYRELAGMIYHGLPMERALLYSMGHPDGAKMPEDSRMFPVQI---------VIASQ 135 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G +A + + + FGDGA ++G +E+ N+A+++++ V++ +NN +A+ Sbjct: 136 LLHAVGAGWACRLKGERSVAAAYFGDGATSEGDFHEALNLASVFSVPVVFFCQNNGWAIS 195 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 VS ++R V++ I G++VDG D+ AV M +AV RA +GP ++E +TYR Sbjct: 196 VPVSHQMRSATVAQRAVAYGIEGIRVDGNDVLAVYEGMLRAVDRARAGEGPTLVEAVTYR 255 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKII 340 H+ + DP YR EE+ R DPI + RK L N+ W+ E + E E R+ + Sbjct: 256 LGPHTTADDPTRYRDEEELKRWRERRDPIVRFRK-FLENRGIWSEEQERAEWE-QARRAV 313 Query: 341 NNSVEFAQSDKEPDPA 356 + +V A+S + DP+ Sbjct: 314 DEAVVRAESYPKADPS 329 >gi|297193216|ref|ZP_06910614.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Streptomyces pristinaespiralis ATCC 25486] gi|197720486|gb|EDY64394.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Streptomyces pristinaespiralis ATCC 25486] Length = 404 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 101/324 (31%), Positives = 155/324 (47%), Gaps = 25/324 (7%) Query: 8 VTVGDIKMALNPSVSAKRAA------TSSVDCVDIPFLEGFEVSEFNKEQELSA------ 55 VTV A P ++KRA+ +S V + EG V + +LSA Sbjct: 22 VTVESTAAARKPRRASKRASATKKPQSSEPQLVQLLTPEGERVQHPEYDIDLSADELRGL 81 Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L RRF+ +A L G +G + L +GQEA +G +L + D + YREHG Sbjct: 82 YRDMVLTRRFDSEATALQRQGELGLWASL-LGQEAAQIGSGRALRDDDYVFPTYREHGVA 140 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GVD + ++ G G + H+++ ++G+Q TG A Sbjct: 141 WCRGVDPTNLLGMFRGVNHGGWDPTTNNFHLYTI---------VIGSQTLHATGYAMGVA 191 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +D + FGDGA++QG V ESF +A++N V++ +NNQ+A+ R + + Sbjct: 192 KDGADSAVIAYFGDGASSQGDVAESFTFSAVYNAPVVFFCQNNQWAISEPTERQT-RVPL 250 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 +R F PG++VDG D+ A A A+ R +GP ++E TYR H+ S DP Sbjct: 251 YQRAQGFGFPGVRVDGNDVLACLAVTRSALERARRGEGPTLVEAFTYRMGAHTTSDDPTK 310 Query: 295 YRTREEINEMRSNHDPIEQVRKRL 318 YR +E + DPI ++R L Sbjct: 311 YRHDDERAAWEAK-DPILRLRTYL 333 >gi|239827651|ref|YP_002950275.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Geobacillus sp. WCH70] gi|239807944|gb|ACS25009.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Geobacillus sp. WCH70] Length = 331 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 150/312 (48%), Gaps = 5/312 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 + E L Y MLL R+ +E+ L G + F C GQEA VG +L D + Sbjct: 11 LSDETVLQMYETMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDRTKDYV 69 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR+ G +L G+ +++M + + S G+ H KN G V QV Sbjct: 70 LPYYRDMGVVLTFGMTPTELMLSAFAKAEDPNSGGRQMPGHFGKKKNRIVTGSSPVTTQV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 GIA A K + D I V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 130 PHAVGIALAAKMEKKDFIAFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAISV 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +S+ A S R + + +PG VDG D V + +A R +GP +IE ++YR Sbjct: 190 PISKQLACEKVSDRAIGYGMPGYTVDGNDPLEVYKVVKEAADRARRGEGPTLIETVSYRL 249 Query: 285 RGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D YR+ EE+ E R+ DPI K L ++ KEI V K ++ + Sbjct: 250 TSHSSDDDQRAYRSEEELEEARAK-DPIISFAKYLKEAGVLTDELEKEIHDRVMKQVDEA 308 Query: 344 VEFAQSDKEPDP 355 ++A+ +P Sbjct: 309 TDYAEKAPYAEP 320 >gi|116696169|ref|YP_841745.1| 2-oxoisovalerate dehydrogenase E1 component subunit alpha [Ralstonia eutropha H16] gi|113530668|emb|CAJ97015.1| 2-Oxoisovalerate dehydrogenase E1 component,alpha subunit [Ralstonia eutropha H16] Length = 361 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 95/314 (30%), Positives = 162/314 (51%), Gaps = 14/314 (4%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N + L Y+ M+L R+F+ KA L G +G F +GQEA+ VG+ ++ D ++ Sbjct: 34 NPDALLPLYQAMVLTRQFDLKAIALQRTGKIGTFAS-ALGQEAIGVGVAFAMRPEDVLVP 92 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+H GV MAE GG +G G F+ + +G QV Sbjct: 93 SYRDHAAQFVRGV----TMAESLLYWGGDERGSG-----FAAAPHDFANCVPIGTQVCHA 143 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A+A + R ++ V GDG ++G YE N+A W+ ++ VI NNQ+A+ S Sbjct: 144 AGAAYAFQLRGEPRVAVCLLGDGGTSKGDFYEGMNMAGAWHAPLVIVINNNQWAISMPRS 203 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +A +++ ++ IPG QVDG D+ AV+ + +A+A R GP +IE +TYR H Sbjct: 204 GQTAAQTLAQKAIAAGIPGEQVDGNDVVAVRHRVGEAIARARDGGGPALIEAITYRLGDH 263 Query: 288 SMSDPANYRTREEIN-EMRSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNVRKIINNSVE 345 + +D A+ R R+E + + +P+ ++R LL + W + + ++ ++ + +VE Sbjct: 264 TTADDAS-RYRDEASVKAHWQEEPLLRLRTHLLALHAWDAAREEALVKACSQQ-VAQAVE 321 Query: 346 FAQSDKEPDPAELY 359 + +PDPA ++ Sbjct: 322 TYLAVPQPDPAAMF 335 >gi|120598931|ref|YP_963505.1| 3-methyl-2-oxobutanoate dehydrogenase [Shewanella sp. W3-18-1] gi|146292983|ref|YP_001183407.1| 3-methyl-2-oxobutanoate dehydrogenase [Shewanella putrefaciens CN-32] gi|153000673|ref|YP_001366354.1| 3-methyl-2-oxobutanoate dehydrogenase [Shewanella baltica OS185] gi|304408701|ref|ZP_07390322.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella baltica OS183] gi|307305530|ref|ZP_07585278.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella baltica BA175] gi|120559024|gb|ABM24951.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella sp. W3-18-1] gi|145564673|gb|ABP75608.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella putrefaciens CN-32] gi|151365291|gb|ABS08291.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella baltica OS185] gi|304352522|gb|EFM16919.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella baltica OS183] gi|306911833|gb|EFN42258.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella baltica BA175] gi|319426487|gb|ADV54561.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella putrefaciens 200] Length = 392 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 84/283 (29%), Positives = 145/283 (51%), Gaps = 2/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA IVG +L + D ++ YREH + G + M ++ + + KG+ Sbjct: 78 FYMTCTGEEAAIVGSVAALDQEDVILAQYREHAALRYRGFTTEQFMNQMFSNEKDLGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + + Q+ TG+ ++ K + K+ V FG+GAA++G + Sbjct: 138 QMPIHYGSAALHYQTISSPLATQIPQATGVGYSLKMQGKRKVAVCYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ VI+ NN YA+ T A + RGV + + ++VDG D+ AV A Sbjct: 198 LNMAAVLKCPVIFFCRNNGYAISTPTEEQFAGNGIASRGVGYGMHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A AY H P++IE +TYR HS S DP+ YR+++E + + HDP+++ + L+ Sbjct: 258 TQQARAYAIEHNAPVLIEAMTYRLGAHSSSDDPSGYRSKDEEAKWQ-QHDPVKRFKLWLI 316 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + W +E D ++ R+ + +V+ A+ P E+ D+ Sbjct: 317 NKGWLAEADDVKLHEKYREEVLAAVKVAEKIPVPMLDEIIEDV 359 >gi|196234480|ref|ZP_03133305.1| dehydrogenase E1 component [Chthoniobacter flavus Ellin428] gi|196221461|gb|EDY16006.1| dehydrogenase E1 component [Chthoniobacter flavus Ellin428] Length = 345 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/336 (29%), Positives = 152/336 (45%), Gaps = 14/336 (4%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 V A +T+S D D+ K + L+A+R MLL R EEK LY G + G Sbjct: 2 VQATAVSTASADTSDL------------KARFLTAFRWMLLARVVEEKLAALYRGGKITG 49 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 L GQEA+ V M+L +GD R+ LA G G + G +G+ Sbjct: 50 GVFLGKGQEALSVATAMALRKGDVFAPLIRDQAGRLAFGETLLDCTRTYMGSRLGPMRGR 109 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD-KICVVCFGDGAANQGQVYE 199 G++H K G +GA + + G A ++R + + V GDGA + G +E Sbjct: 110 DGNVHRGRPKEGLMAMISHLGAMLPVVAGTLLARRFRGVEGTVGAVNLGDGATSTGAFHE 169 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 N+AA+ L ++ V+ NNQYA T SR A + + V + + G VDG ++ A Sbjct: 170 GLNLAAVEKLPLVLVVANNQYAYSTPTSRQFACEDLVDKAVGYGVAGHSVDGTNLEACLD 229 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 +D+AV R GP ++ R GH D A Y + + D +E +RLL Sbjct: 230 VLDRAVTAARTGGGPQLVIASLLRLVGHGEHDDAGY-VDPALRKSPLGADCLELAEQRLL 288 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 H W + L E++ + ++ + +V + PDP Sbjct: 289 HENWTTSSALHEMQQDAQRQVEEAVATTLREPLPDP 324 >gi|192292812|ref|YP_001993417.1| dehydrogenase E1 component [Rhodopseudomonas palustris TIE-1] gi|192286561|gb|ACF02942.1| dehydrogenase E1 component [Rhodopseudomonas palustris TIE-1] Length = 325 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 150/308 (48%), Gaps = 5/308 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 ML IR EE YG + HL +GQEAV L D ++ +R H H LA Sbjct: 13 MLRIRSVEETIAARYGEQKMRCPTHLSVGQEAVSAAAGAVLRPTDLAVSGHRAHAHYLAK 72 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G ++AE+ G+ G ++GKGGSMH+ GF G IVG V +G G+++ K + Sbjct: 73 GGSLKAMIAEIYGKVTGCARGKGGSMHLVDESVGFMGSTAIVGGTVPVGVGLSYPMKLNQ 132 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS-RASAQTNFSK 237 + +I V GD G +ES N A + L V+++ ENN Y++ + +S R + Sbjct: 133 TGQISCVFLGDAVPETGVFFESVNFAVVKQLPVLFLCENNGYSVYSPLSVRQPPCRKLYE 192 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH--SMSD-PAN 294 F + DG D RAV A + + VA RA +GP E TYR+R H M D Sbjct: 193 LVAGFGLKTHHGDGNDARAVYAALSEGVAAIRAGEGPRFYEFETYRWREHCGPMYDNDLG 252 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT E E DP+ +++ L+ + D+ +++ + I + FA+S P Sbjct: 253 YRTASEF-EAWKLRDPVPTLQRALITEAIVTAADVADMQAEIDAEIEEAFAFAESSPFPP 311 Query: 355 PAELYSDI 362 P + ++D+ Sbjct: 312 PEDAFTDV 319 >gi|83749487|ref|ZP_00946477.1| Pyruvate dehydrogenase E1 component alpha subunit [Ralstonia solanacearum UW551] gi|207743104|ref|YP_002259496.1| pyruvate dehydrogenase e1 component (alpha subunit) protein [Ralstonia solanacearum IPO1609] gi|83723841|gb|EAP71029.1| Pyruvate dehydrogenase E1 component alpha subunit [Ralstonia solanacearum UW551] gi|206594501|emb|CAQ61428.1| pyruvate dehydrogenase e1 component (alpha subunit) protein [Ralstonia solanacearum IPO1609] Length = 368 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 89/272 (32%), Positives = 138/272 (50%), Gaps = 11/272 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ YR M+L R F+ KA L G +G F +GQEA+ VG+ ++ D + +YR+H Sbjct: 36 LALYRAMVLTRAFDTKAIALQRTGKLGTFAS-SVGQEAIGVGVASAMRAEDVLFPSYRDH 94 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L GV MAE GG +G F+ + +G QV G A+ Sbjct: 95 SAQLLRGVS----MAESLLYWGGDERGS-----CFAAVREDFPNCVPIGTQVCHAVGAAY 145 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A RR ++ V FGDG ++G YE N+A +WN ++ ++ NNQ+A+ SR +A Sbjct: 146 AFALRREPRVAVAVFGDGGTSKGDFYEGMNLAGVWNAPLVLIVNNNQWAISVPRSRQTAA 205 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ I G QVDG D+ AV+ +A+ RA GP +IE L+YR H+ +D Sbjct: 206 QTLAQKAIAAGIAGRQVDGNDVIAVRQAAQEALDKARAGGGPTLIEALSYRLGDHTTADD 265 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLL-HNKW 323 A +I + +PI ++R L+ N W Sbjct: 266 ATRYRDSDIVKQAWAREPILRLRNYLVRQNAW 297 >gi|196230159|ref|ZP_03129022.1| dehydrogenase E1 component [Chthoniobacter flavus Ellin428] gi|196225756|gb|EDY20263.1| dehydrogenase E1 component [Chthoniobacter flavus Ellin428] Length = 313 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 84/249 (33%), Positives = 131/249 (52%), Gaps = 6/249 (2%) Query: 58 LMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 L+LLIR FEE +L+ G + G H C+GQE + V + L + D + + +R HGH LA Sbjct: 27 LLLLIRHFEETLLRLFQSGKIHGTTHTCLGQEYIPVAVMPLLRDDDFVFSNHRGHGHYLA 86 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 D ++AE+ GR+GG G GGS H+ + Y G+ G + + G A + + Sbjct: 87 RFRDPEGLLAEIMGREGGTCDGVGGSQHL---RRDRYISTGVQGESLPVAVGAALQLRRK 143 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + + V GDG QG VYE+ N+AALWN V+ ++ENN A T+V A+ N Sbjct: 144 KRGGLAVPFIGDGTWGQGAVYEALNMAALWNAPVVVIVENNGIAQ-TTVRSANMAGNIEG 202 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 R +F + ++ G + A++A + + R P+++E T R HS D + RT Sbjct: 203 RARAFGVEYLRCTGHEAEALQARLAPELDRVRQSGAPLVVEFETRRLAAHSKGD--DTRT 260 Query: 298 REEINEMRS 306 EE+ +R+ Sbjct: 261 PEEVAALRA 269 >gi|126666833|ref|ZP_01737809.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Marinobacter sp. ELB17] gi|126628549|gb|EAZ99170.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Marinobacter sp. ELB17] Length = 404 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 97/333 (29%), Positives = 162/333 (48%), Gaps = 5/333 (1%) Query: 25 RAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 R +T + D +G + + +KE+ L YR M+ R +E+ G + F Sbjct: 21 RISTFKLLKQDGSLYKGGKAPDISKEKALRIYRAMVTTRILDERMLAAQRQGRLS-FYMQ 79 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C G+EA ++G +L + D ++ YRE G + G + M +L G KG+ + Sbjct: 80 CTGEEAAVIGSAAALDDSDMIMAQYREQGALAYRGFTIDEFMNQLFGNNKDYGKGRQMPV 139 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 H S K + + Q+ TG A+ K +V FG+GAA++G + + N+A Sbjct: 140 HYGSKKLYYMTISSPLATQIPQATGYAYGQKLAGEGHCTLVYFGEGAASEGDFHAALNMA 199 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 A+ + VI+ NN YA+ T S A + R + + ++VDG D+ AV +KA Sbjct: 200 AVHRVPVIFFCRNNGYAISTPASEQFAADGVAPRAYGYKMDVIRVDGNDVLAVYQATEKA 259 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 P++IE +TYR HS S DP+ YR+++E R DPI + + L + W Sbjct: 260 RQMAVEENRPVLIEAMTYRLAAHSSSDDPSGYRSKDEEAIWREK-DPILRTQHWLKSHGW 318 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 S+ + KE++ +R+ + +++ AQ K P PA Sbjct: 319 WSDNEEKELQERLRREVLETMKQAQ--KRPPPA 349 >gi|256789134|ref|ZP_05527565.1| pyruvate dehydrogenase alpha subunit [Streptomyces lividans TK24] Length = 323 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 132/258 (51%), Gaps = 7/258 (2%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 +L+IR FE +L+ G + G H C+GQE + V + L EGD + + +R HGH LA Sbjct: 38 LLMIRHFELAVLELFSQGRLHGTTHTCLGQEYIPVALYPLLDEGDYVFSNHRGHGHYLAR 97 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 D ++AE+ GR G + G GGS H++ + Y G+ G + + G+ K Sbjct: 98 FHDPHGLLAEIMGRAGAVCHGVGGSQHIYRDR---YLSTGVQGQSLPVAVGVGLHLKQAE 154 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 +I VV GDG +G VYE+ N+A LW + V+ V+E+N A T R + T + R Sbjct: 155 PGRIAVVHIGDGTWGEGAVYEALNMAQLWQVPVLVVVEHNGIAQSTPTERQMSGT-VAAR 213 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 +F + +++D +D+ V+A + V R P ++E +T+R HS D + Sbjct: 214 AAAFGVGHLRIDSVDVTDVRAALTPVVEQVRDRHRPYVVECVTHRVGPHSKGDDSR---P 270 Query: 299 EEINEMRSNHDPIEQVRK 316 E+ E + HD + R+ Sbjct: 271 AEVRERAARHDWYRRYRQ 288 >gi|138895948|ref|YP_001126401.1| 2-oxoisovalerate dehydrogenase subunit alpha [Geobacillus thermodenitrificans NG80-2] gi|196248839|ref|ZP_03147539.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Geobacillus sp. G11MC16] gi|134267461|gb|ABO67656.1| 2-oxoisovalerate dehydrogenase alpha subunit [Geobacillus thermodenitrificans NG80-2] gi|196211715|gb|EDY06474.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Geobacillus sp. G11MC16] Length = 331 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 147/306 (48%), Gaps = 5/306 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 L Y MLL R+ +E+ L G + F C GQEA VG +L D ++ YR+ Sbjct: 17 LQMYETMLLARKLDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDRTKDYILPYYRD 75 Query: 112 HGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 G +L G+ +++M A + S G+ H KN G V QV G Sbjct: 76 MGVVLTFGMTPTELMLAAFAKAEDPNSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGF 135 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ +S+ Sbjct: 136 ALAAKMEKKDFVAFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAISVPISKQL 195 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A S R + + +PG VDG D V + +A R +GP +IE +TYR HS Sbjct: 196 ACEKVSDRAIGYGMPGYTVDGTDPLEVYRVVKEAADRARRGEGPTLIEAVTYRLTSHSSD 255 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D YRT EE+ E R+ DPI L ++ ++I+ V K +N + ++A+ Sbjct: 256 DDHRVYRTEEELAEARAK-DPIVSFANYLKEVGVLTDALDEDIQARVMKQVNEATDYAEK 314 Query: 350 DKEPDP 355 +P Sbjct: 315 APYAEP 320 >gi|39936984|ref|NP_949260.1| putative acetoin dehydrogenase (TPP-dependent) subunit alpha [Rhodopseudomonas palustris CGA009] gi|39650841|emb|CAE29364.1| putative acetoin dehydrogenase (TPP-dependent) alpha chain [Rhodopseudomonas palustris CGA009] Length = 325 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 150/308 (48%), Gaps = 5/308 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 ML IR EE YG + HL +GQEAV L D ++ +R H H LA Sbjct: 13 MLRIRSVEETIAARYGEQKMRCPTHLSVGQEAVSAAAGAVLRPTDLAVSGHRAHAHYLAK 72 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G ++AE+ G+ G ++GKGGSMH+ GF G IVG V +G G+++ K + Sbjct: 73 GGSLKAMIAEICGKVTGCARGKGGSMHLVDESVGFMGSTAIVGGTVPVGVGLSYPMKLNQ 132 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS-RASAQTNFSK 237 + +I V GD G +ES N A + L V+++ ENN Y++ + +S R + Sbjct: 133 TGQISCVFLGDAVPETGVFFESVNFAVVKQLPVLFLCENNGYSVYSPLSVRQPPGRKLYE 192 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH--SMSD-PAN 294 F + DG D RAV A + + VA RA +GP E TYR+R H M D Sbjct: 193 LVAGFGLKTHHGDGNDARAVYAALSEGVAAIRAGEGPRFYEFETYRWREHCGPMYDNDLG 252 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT E E DP+ +++ L+ + D+ +++ + I + FA+S P Sbjct: 253 YRTVAEF-EAWKLRDPVPALQRALITEAIVTAADVADMQAEIDAEIEEAFAFAESSPFPP 311 Query: 355 PAELYSDI 362 P + ++D+ Sbjct: 312 PEDAFTDV 319 >gi|261420669|ref|YP_003254351.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacillus sp. Y412MC61] gi|319768339|ref|YP_004133840.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacillus sp. Y412MC52] gi|261377126|gb|ACX79869.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. Y412MC61] gi|317113205|gb|ADU95697.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. Y412MC52] Length = 359 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 87/274 (31%), Positives = 147/274 (53%), Gaps = 12/274 (4%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 +++ F+ E L AYR M R +E+ ++ G +G + GQEA +G ++L + Sbjct: 25 KLAAFSDEWLLRAYREMRRARVIDERLLRMQRQGRIGTYAPFS-GQEAAQIGSALALRKD 83 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + +YRE L G+ + + GR G K +++F T+ I+ A Sbjct: 84 DWIFPSYREVAVCLMHGMPLEQFFHYVQGRLSG--KRMPDEVNIFPTQI-------IIAA 134 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q G A+A+K + + V FGDGA ++G +E+ N AA++N+ VI+ +NNQYA+ Sbjct: 135 QTLHAVGCAWASKLKGEPHVSVAYFGDGATSEGDFHEAMNFAAVYNVPVIFFCQNNQYAI 194 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +A +++ +++ + G+ VDG D+ AV TM +AV R +GP++IE LTY Sbjct: 195 SVPYRKQTASRTIAQKALAYGMKGVLVDGNDVLAVYETMKQAVEAARRGEGPMLIEALTY 254 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVR 315 R H+ + DP YR EE+ R+ DP+ ++R Sbjct: 255 RLGPHTTADDPTKYRRPEEVETWRTK-DPLHRLR 287 >gi|21219778|ref|NP_625557.1| pyruvate dehydrogenase subunit alpha [Streptomyces coelicolor A3(2)] gi|9368918|emb|CAB99150.1| putative pyruvate dehydrogenase alpha subunit [Streptomyces coelicolor A3(2)] Length = 323 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 84/259 (32%), Positives = 133/259 (51%), Gaps = 9/259 (3%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 +L+IR FE +L+ G + G H C+GQE + V + L EGD + + +R HGH LA Sbjct: 38 LLMIRHFELAVLELFSQGRLHGTTHTCLGQEYIPVALYPLLDEGDYVFSNHRGHGHYLAR 97 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 D ++AE+ GR G + G GGS H++ + Y G+ G + + G+ K Sbjct: 98 FHDPHGLLAEIMGRAGAVCHGVGGSQHIYRDR---YLSTGVQGQSLPVAVGVGLHLKQAE 154 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 +I VV GDG +G VYE+ N+A LW + V+ V+E+N A T R + T + R Sbjct: 155 PGRIAVVHIGDGTWGEGAVYEALNMAQLWQVPVLVVVEHNGIAQSTPTERQMSGT-VAAR 213 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 +F + +++D +D+ V+A + V R P ++E +T+R HS D TR Sbjct: 214 AAAFGVGHLRIDSVDVTDVRAALTPVVEQVRDRHRPYVVECVTHRVGPHSKGD----DTR 269 Query: 299 E-EINEMRSNHDPIEQVRK 316 E+ E + HD + R+ Sbjct: 270 PAEVRERAARHDWYRRYRQ 288 >gi|226355231|ref|YP_002784971.1| pyruvate dehydrogenase E1 component subunit alpha [Deinococcus deserti VCD115] gi|226317221|gb|ACO45217.1| putative Pyruvate dehydrogenase E1 component subunit alpha [Deinococcus deserti VCD115] Length = 375 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 88/313 (28%), Positives = 153/313 (48%), Gaps = 12/313 (3%) Query: 52 ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 +L YR M R F+E+ LY G +G F G EA G +LT D + YR+ Sbjct: 54 QLRLYREMRRARHFDERGWVLYRQGRLGVFPPFG-GMEASQCGTAAALTSDDWLFPTYRD 112 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 G L G+ ++ +A G + + + F + Q G A Sbjct: 113 TGAALTLGLPIARTLAYWRTSPHGWAMPENLKVLPFYIP---------IATQYPQAVGAA 163 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A + + + + + GDG +++G +E+ N A N +++++NN +A+ + + Sbjct: 164 LAEQRQGTRNVAMAFIGDGGSSEGDFHEALNFAGALNAPCVFILQNNGWAISVPTRKQTK 223 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS- 290 TN S+R + IPG++VDG D+ A ++AV RA +GP +IE +TYR + H+++ Sbjct: 224 ATNLSRRAEGYGIPGVRVDGNDVLATWHVTNEAVQRARAGEGPTLIETVTYRIKPHTVAD 283 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 DP+ YRT EE N + DP+E++R+ L+++ +E E+ V +++ A S Sbjct: 284 DPSRYRT-EEDNAGWAEKDPVERMRRHLMNSGLLTEQSEAELLSEVAAEFEAALQEADSY 342 Query: 351 KEPDPAELYSDIL 363 +P PAE+ + Sbjct: 343 PDPTPAEILDHVF 355 >gi|297531459|ref|YP_003672734.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacillus sp. C56-T3] gi|297254711|gb|ADI28157.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. C56-T3] Length = 359 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 87/274 (31%), Positives = 147/274 (53%), Gaps = 12/274 (4%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 +++ F+ E L AYR M R +E+ ++ G +G + GQEA +G ++L + Sbjct: 25 KLAAFSDEWLLRAYREMRRARVIDERLLRMQRQGRIGTYAPFS-GQEAAQIGSALALRKD 83 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + +YRE L G+ + + GR G K +++F T+ I+ A Sbjct: 84 DWIFPSYREVAVCLMHGMPLEQFFHYVQGRLSG--KRMPDEVNIFPTQI-------IIAA 134 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q G A+A+K + + V FGDGA ++G +E+ N AA++N+ VI+ +NNQYA+ Sbjct: 135 QTLHAVGCAWASKLKGEPHVSVAYFGDGATSEGDFHEAMNFAAVYNVPVIFFCQNNQYAI 194 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +A +++ +++ + G+ VDG D+ AV TM +AV R +GP++IE LTY Sbjct: 195 SVPYRKQTASRTIAQKALAYGMKGVLVDGNDVLAVYETMKQAVEAARRGEGPMLIEALTY 254 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVR 315 R H+ + DP YR EE+ R+ DP+ ++R Sbjct: 255 RLGPHTTADDPTKYRRPEEVEAWRTK-DPLHRLR 287 >gi|86141589|ref|ZP_01060135.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Leeuwenhoekiella blandensis MED217] gi|85832148|gb|EAQ50603.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Leeuwenhoekiella blandensis MED217] Length = 666 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/309 (28%), Positives = 153/309 (49%), Gaps = 6/309 (1%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 F+ + + E LS Y+ +L RR EEK L G + + IGQEA+ VG+ M+L Sbjct: 10 AFQNNSLSHETLLSLYQELLKPRRIEEKMLILLRQGKISKWFS-GIGQEAIAVGVTMALE 68 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 + ++ +R G V ++ ++ G+ G +KG+ S H + G + Sbjct: 69 TDEYILPMHRNLGVFTTRKVPLHRLFSQWQGKANGFTKGRDRSFHFGTQDYKIVGMISHL 128 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 G Q+ + GIA A+K R KI V G+G ++G +E+ N+A++W+L V++ IENN Y Sbjct: 129 GPQLGVADGIALAHKLRHEKKITAVFTGEGGTSEGDFHEALNVASVWDLPVLFCIENNGY 188 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 + T S + + R + + +DG +I V + K R + P+++E Sbjct: 189 GLSTPTSEQYRCAHLADRAKGYGMESHIIDGNNIVEVYQALSKIAESMRENPRPVLVEFK 248 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 T+R RGH + Y EE+ + + DP+ K L+H +E +++E+N + I Sbjct: 249 TFRMRGHEEASGVKY-VPEELMQFWAEKDPVSNFEKYLIHQGILTEA--QKLEIN--ETI 303 Query: 341 NNSVEFAQS 349 N +E+A S Sbjct: 304 QNEIEYALS 312 >gi|15612776|ref|NP_241079.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Bacillus halodurans C-125] gi|10172825|dbj|BAB03932.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Bacillus halodurans C-125] Length = 367 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 90/324 (27%), Positives = 160/324 (49%), Gaps = 13/324 (4%) Query: 42 FEVSEF-NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 +E SEF +K LS Y+ M+ R F+EKA +L G +G + GQEA +G ++L Sbjct: 30 YEGSEFLDKTFVLSMYKQMINCREFDEKALKLQRQGRIGTYASFK-GQEACQIGGALALR 88 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D + YR+H I G +I G G + + Sbjct: 89 PTDWLFPTYRDHAAISTHGQPWHRIFLYWMGHMDG---------SLSPDDRNILPPAVPI 139 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q+ G A+A+K + + + +V FGDGA ++G +E+ N A ++ I+ +NN Y Sbjct: 140 ATQMLHAVGTAWADKLKGNPHVSLVFFGDGATSEGDFHEALNFAGVYQTPTIFFCQNNGY 199 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ + SA +R V++++ G +VDG DI AV T+ +A+ R +GP +IE + Sbjct: 200 AISVPFEKQSASKTIKQRSVAYDMRGERVDGNDIFAVYLTVKRAIEQARKGRGPTLIEAV 259 Query: 281 TYRYRGHSMSDPA-NYRTREEINE-MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 T R+ H+ +D A YR +EEI + DP+ +++ + W SE + +++ +R+ Sbjct: 260 TTRFGSHTTADDAKKYRDQEEIERTWKEMQDPLTRLKAYIQAKGWLSEEEEAQMKAKIRE 319 Query: 339 IINNSVEFAQSDKEPDPAELYSDI 362 I+ + A+ +P ++++ + Sbjct: 320 TIDEELSMAEQYPKPSISQMFEHV 343 >gi|226312343|ref|YP_002772237.1| 2-oxo acid dehydrogenase E1 component alpha subunit [Brevibacillus brevis NBRC 100599] gi|226095291|dbj|BAH43733.1| 2-oxo acid dehydrogenase E1 component alpha subunit [Brevibacillus brevis NBRC 100599] Length = 367 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/310 (28%), Positives = 159/310 (51%), Gaps = 14/310 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M+L+R+F+ K+ L G +G + GQEA VG M+L GD + YR+H Sbjct: 43 YENMVLVRQFDRKSINLQRQGRMGTYAPFE-GQEASQVGSAMALAPGDWLFPTYRDHAAA 101 Query: 116 LACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + G +++ G +G IS M + Q+ G A+A+ Sbjct: 102 IVHGQSMARVFLYWMGHMEGSISPKHLNIMPPCVP----------IATQMVHAVGTAWAS 151 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + + + FGDGA+++G +E+ N A ++ I+ +NN +A+ S+ SA Sbjct: 152 KLQNEQHVSIAYFGDGASSEGDFHEALNFAGVFQTPTIFFCQNNGFAISVPFSQQSASKT 211 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 ++R +++IPG+++DG DI AV TM +A+ KGP +IE +T+RY H+ + DP Sbjct: 212 IAQRSAAYDIPGVRIDGNDIFAVWLTMKEAMQRALEGKGPTLIEAVTFRYGAHTTADDPK 271 Query: 294 NYRTREEIN-EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR +E ++ E R DP++++R L + +E E+ +V + I+ ++ A+S + Sbjct: 272 KYRDQEILSEEWRQERDPLQRLRVFLENQGLWNETKEDELMAHVNEQIDAALVEAESYPK 331 Query: 353 PDPAELYSDI 362 P +++ + Sbjct: 332 SKPEDMFKHV 341 >gi|72160584|ref|YP_288241.1| pyruvate dehydrogenase (lipoamide) [Thermobifida fusca YX] gi|71914316|gb|AAZ54218.1| pyruvate dehydrogenase (lipoamide) [Thermobifida fusca YX] Length = 405 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/312 (31%), Positives = 152/312 (48%), Gaps = 17/312 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR ++L+RR + +A L G +G + L +GQEA +G +L D +YREHG Sbjct: 76 YRDLVLVRRLDAEAVALQRQGELGLWASL-LGQEAAQIGSARALEPQDMAFPSYREHGVA 134 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GV ++A G G + H+++ ++G+Q TG A + Sbjct: 135 WCRGVRPRDLLAMFRGVTNGGWDPYEHNFHLYTI---------VIGSQTLHATGYAMGVQ 185 Query: 176 YRRS---DKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + D V+ FGDGA +QG E+FN AA+ N V++ +NNQ+A+ R S Sbjct: 186 RDGALGEDGTAVITYFGDGATSQGDTNEAFNYAAVNNAPVVFFCQNNQWAISEPNDRQS- 244 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS- 290 + +R F PG++VDG D+ A A KA+ + R +GP +IE TYR H+ S Sbjct: 245 KAPIYQRAAGFGFPGIRVDGNDVFACLAVTRKALQHAREGQGPTLIEAFTYRMGAHTTSD 304 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 DP YRT EI E R DPI ++R L+ A +G +E K+ ++ Sbjct: 305 DPTRYRTSAEIEEWRRK-DPIARLRAYLVREGKADDGFFDAVEAEAEKLGEQVRAECRAL 363 Query: 351 KEPDPAELYSDI 362 +P P +++ ++ Sbjct: 364 PDPAPLDIFREV 375 >gi|126641744|ref|YP_001084728.1| acetoin:26-dichlorophenolindophenol oxidoreductase alpha subunit [Acinetobacter baumannii ATCC 17978] Length = 240 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 128/240 (53%), Gaps = 2/240 (0%) Query: 125 IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 +M E+ G+ G+ +GKGGSMH+ G G +GIVG L G A K ++ + + Sbjct: 1 MMLEIFGKDDGLCRGKGGSMHIADLDKGMLGANGIVGGGPPLAIGAALTAKTLKTGGVGL 60 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 GDG +NQG +E+ N+A + L VI+V ENN + GT A + + R F + Sbjct: 61 SFTGDGGSNQGLTFEAMNMAVVLKLPVIFVFENNGFGEGTGHDYAVGSKDIAGRAAGFGL 120 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEM 304 P ++VDG D AV A+ R +GP +IE +T R+ GH DP R++EE+ + Sbjct: 121 PAVKVDGTDFFAVYEAAQTAIERARRGEGPSVIETITNRFYGHFEGDPGLIRSKEEVEFI 180 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 + N DP++ R+++ E L EI+ + ++++V A++ P P +L +D+ + Sbjct: 181 KENKDPLKIFREKV--KGKIDEAKLDEIDAASKANVDDAVAKARAAAYPKPEQLLTDVYV 238 >gi|327402519|ref|YP_004343357.1| Pyruvate dehydrogenase [Fluviicola taffensis DSM 16823] gi|327318027|gb|AEA42519.1| Pyruvate dehydrogenase (acetyl-transferring) [Fluviicola taffensis DSM 16823] Length = 674 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 88/315 (27%), Positives = 155/315 (49%), Gaps = 4/315 (1%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 F F+ E+ ++ Y+ + R EEK L G + + GQE + VG ++ + Sbjct: 18 FNRDGFDNEELVTIYKAIAKPRLIEEKMLILLRQGKITKWFS-GWGQEGISVGSAYAMKQ 76 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 + ++ +R G G+ +++ A+ G+ G +KG+ S H + G +G Sbjct: 77 EEFILPMHRNLGVFTTRGIPLNRLFAQFQGKMSGFTKGRDRSFHFGTKDYNIVGMISHLG 136 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ + GIA ANK + +D+ +V GDG A++G +ES N+A++W+L VI+ IENN + Sbjct: 137 PQLGIADGIALANKLKGNDQATIVFTGDGGASEGDFHESLNVASVWDLPVIFAIENNCWG 196 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T + F +G+ + + QVDG +I V T+ K R P ++E +T Sbjct: 197 LSTPSNEQFRCKQFIDKGIGYGMDAFQVDGNNILDVIRTVRKIADSIRQKPRPFLLEFMT 256 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 +R RGH + Y + I + + DP+ LL +E + +I +++ I Sbjct: 257 FRMRGHEEASGTKYYP-DGIQDEWAKKDPVSNFETYLLEQGVLTEELVAQIHQDIKDEIQ 315 Query: 342 NSVE--FAQSDKEPD 354 N ++ FA+S EPD Sbjct: 316 NGLDIAFAESPIEPD 330 >gi|328883634|emb|CCA56873.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptomyces venezuelae ATCC 10712] Length = 392 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 96/330 (29%), Positives = 158/330 (47%), Gaps = 19/330 (5%) Query: 40 EGFEVSEFNKEQELSA------YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 EG V + + +LSA YR M+L RRF+ +A L G +G + L +GQEA + Sbjct: 47 EGERVQHPDYDIDLSAEELRGLYRDMVLTRRFDAEATSLQRQGELGLWASL-LGQEAAQI 105 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G +L + D + YREHG GVD + ++ G G + H+++ Sbjct: 106 GSGRALRDDDYVFPTYREHGVAWVRGVDPTNLLGMFRGVNHGGWDPNSNNFHLYTI---- 161 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 ++G+Q TG A +D + FGDGA++QG V E+F +A++N V++ Sbjct: 162 -----VIGSQTLHATGYAMGIAKDGADSAVIAYFGDGASSQGDVNEAFTFSAVYNAPVVF 216 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 +NNQ+A+ + + + +R F PG++VDG D+ A A A+ R +G Sbjct: 217 FCQNNQWAISEPTEKQT-RVPLYQRARGFGFPGVRVDGNDVLACLAVTRSALERARRGEG 275 Query: 274 PIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P ++E TYR H+ S DP YR R+E E DPI +++ L A E + + Sbjct: 276 PTLVEAFTYRMGAHTTSDDPTKYR-RDEEREAWEAKDPILRLKAYLEREGHADEAFFEAL 334 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 E + E ++ +PD ++ ++ Sbjct: 335 EAESEALGKRVREGVRTMPDPDDMAIFENV 364 >gi|320450421|ref|YP_004202517.1| pyruvate dehydrogenase E1 component subunit alpha [Thermus scotoductus SA-01] gi|320150590|gb|ADW21968.1| pyruvate dehydrogenase E1 component, subunit alpha [Thermus scotoductus SA-01] Length = 346 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 94/289 (32%), Positives = 143/289 (49%), Gaps = 21/289 (7%) Query: 31 VDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEA 90 +D ++P EG + L+ YR M R F+EKA L G +G + +GQEA Sbjct: 9 LDRGELPLKEG---------EALALYRAMRRARFFDEKALLLQRQGRLGVYAPF-MGQEA 58 Query: 91 VIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK 150 VG+ ++L E D ++ +YRE +LA G+ ++ G F + Sbjct: 59 AQVGVALALGERDWVVPSYRESALLLARGLPIHVLILYWRAHPAGWR---------FPEE 109 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 + + Q+ G+A A +YR D + GDG ++G +E N AA+++ Sbjct: 110 VRAVNPYIPIATQIPQAVGLALAGRYRGEDWVVATSIGDGGTSEGDFHEGLNFAAVFDAP 169 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 V+++++NN YA+ SR ++R + IPG+ VDG D AV KAV R Sbjct: 170 VLFLVQNNGYAISVPRSRQMRVDFIARRAEGYGIPGVVVDGNDAVAVYLEARKAVERARK 229 Query: 271 HKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 +GP ++E LTYR H+ S DP+ YRTREE RS DPI ++RK L Sbjct: 230 GEGPTLLEALTYRLAPHTTSDDPSRYRTREEEEAWRSK-DPILRLRKAL 277 >gi|300704105|ref|YP_003745707.1| pyruvate dehydrogenase e1 component (subunit alpha) oxidoreductase protein [Ralstonia solanacearum CFBP2957] gi|299071768|emb|CBJ43092.1| putative pyruvate dehydrogenase e1 component (Alpha subunit) oxidoreductase protein [Ralstonia solanacearum CFBP2957] Length = 368 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 89/272 (32%), Positives = 138/272 (50%), Gaps = 11/272 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ YR M+L R F+ KA L G +G F +GQEA+ VG+ ++ D + +YR+H Sbjct: 36 LALYRAMVLTRAFDTKAVALQRTGKLGTFAS-SVGQEAIGVGVASAMRAEDVLFPSYRDH 94 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L GV MAE GG +G F+ + +G QV G A+ Sbjct: 95 SAQLLRGVS----MAESLLYWGGDERGS-----CFAAVREDFPNCVPIGTQVCHAVGAAY 145 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A RR ++ V FGDG ++G YE N+A +WN ++ ++ NNQ+A+ SR +A Sbjct: 146 AFALRREPRVAVTVFGDGGTSKGDFYEGMNLAGVWNAPLVLIVNNNQWAISVPRSRQTAA 205 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ I G QVDG D+ AV+ +A+ RA GP +IE L+YR H+ +D Sbjct: 206 QTLAQKAIAAGIAGRQVDGNDVIAVRQAAQEALDKARAGGGPTLIEALSYRLGDHTTADD 265 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLL-HNKW 323 A +I + +PI ++R L+ N W Sbjct: 266 ATRYRDPDIVKQAWAREPILRLRNYLVCLNAW 297 >gi|302869525|ref|YP_003838162.1| pyruvate dehydrogenase (acetyl-transferring) [Micromonospora aurantiaca ATCC 27029] gi|302572384|gb|ADL48586.1| Pyruvate dehydrogenase (acetyl-transferring) [Micromonospora aurantiaca ATCC 27029] Length = 376 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 93/309 (30%), Positives = 153/309 (49%), Gaps = 13/309 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M L RR +++A L G +G + C GQEA VG ++ D + +YREH Sbjct: 57 YRGMRLARRLDDEAFALQRQGELGLWLQ-CRGQEAAQVGSVAAVRSDDYVFPSYREHAAA 115 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G+ + ++ + G + S H+++ ++ AQ+ TG A + Sbjct: 116 LWRGIGPADLLRQWRGVAHSGWDPEPYSFHIYTL---------VLAAQLLHATGYALGVQ 166 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 SD + V FGDGAA++G E+ NIAA+ +++ +NNQ+A+ T + + +T Sbjct: 167 RDGSDTVVVTYFGDGAASEGDASEAMNIAAVNAAPMVFFCQNNQWAISTPTA-SQTRTPI 225 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 +RG F + VDG D+ AV A + R+ GP I+E TYR GHS S DP Sbjct: 226 HRRGAGFGLRSEWVDGNDVLAVYAVTSAVTEHARSGHGPAIVEATTYRMGGHSTSDDPTR 285 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT +E+ R+ DP+ +V + W+ E L I+ ++ + + + + PD Sbjct: 286 YRTDDELAAWRAR-DPLARVEALMRAEGWSDEAFLDGIQAEADELADRTRRECLALEAPD 344 Query: 355 PAELYSDIL 363 A+ ++ +L Sbjct: 345 LADAFATVL 353 >gi|47459419|ref|YP_016281.1| pyruvate dehydrogenase E1 component alpha subunit [Mycoplasma mobile 163K] gi|47458749|gb|AAT28070.1| pyruvate dehydrogenase E1 component alpha subunit [Mycoplasma mobile 163K] Length = 370 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 86/303 (28%), Positives = 154/303 (50%), Gaps = 12/303 (3%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V E+ L AYR M+L R ++ QL G + F G+EA+ M + +GD Sbjct: 38 VDTLTDEKILKAYRYMVLSREQDDYMSQLQLQGKMLTFAP-NYGEEALQAAAAMPMKKGD 96 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + A+R + +L GV + G + G K ++ + +G Q Sbjct: 97 WFVPAFRSNVTMLYLGVPLKNQLLYWNGNENGNKMPKDVNVLPVNIP---------IGTQ 147 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 S TG+AF +++ + + V G+G ++G+ +E+ N A++ L ++ + NNQ+++ Sbjct: 148 TSHATGLAFGMRHKGNKNVSVSFIGNGGTSEGEYFEAMNFASIHKLPTVFCVNNNQWSIS 207 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + G + IPG++VDG D+ A M++A+ Y R+ GP+++E +T+R Sbjct: 208 TPSHLERASSTIASDGYAMGIPGLRVDGNDLLASYEVMEEALEYARSGNGPVLVEFVTWR 267 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ S DP YRTR E+ + +P ++ K +L NK AS+ DL++I +V+ + Sbjct: 268 QGKHTTSDDPTVYRTR-EVEKKHEEWEPFHRIEKYILDNKIASKKDLEKIAEDVKPEVRK 326 Query: 343 SVE 345 + E Sbjct: 327 AYE 329 >gi|56420913|ref|YP_148231.1| branched-chain alpha-keto acid dehydrogenase E1 component subunit alpha [Geobacillus kaustophilus HTA426] gi|56380755|dbj|BAD76663.1| branched-chain alpha-keto acid dehydrogenase E1 component alpha chain (2-oxoisovalerate dehydrogenase alpha subunit) [Geobacillus kaustophilus HTA426] Length = 331 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 146/306 (47%), Gaps = 5/306 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 L Y MLL R+ +E+ L G + F C GQEA VG +L D ++ YR+ Sbjct: 17 LEMYETMLLARKLDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDRTKDYVLPYYRD 75 Query: 112 HGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 G +L G+ ++M A + S G+ H KN G V QV G Sbjct: 76 VGVVLTFGMTPRELMLAAFAKAEDPNSGGRQMPGHFGKKKNRIVTGSSPVTTQVPHAVGF 135 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ +S+ Sbjct: 136 ALAAKMEKKDFVAFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAISVPISKQL 195 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A S R + + +PG VDG D V + +A R +GP +IE +TYR HS Sbjct: 196 ACEKVSDRAIGYGMPGYTVDGTDPLEVYRVVKEAADRARRGEGPTLIEAVTYRLTSHSSD 255 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D YRT EE+ E R+ DPI L ++ ++I+ V K +N + ++A+ Sbjct: 256 DDHRVYRTEEELAEARAK-DPIVSFANYLKETGVLTDQLDEDIQARVMKEVNEATDYAEK 314 Query: 350 DKEPDP 355 +P Sbjct: 315 APYAEP 320 >gi|297180763|gb|ADI16970.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (e1) component, eukaryotic type, beta subunit [uncultured Sphingobacteriales bacterium HF0010_19H17] Length = 661 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 83/269 (30%), Positives = 144/269 (53%), Gaps = 4/269 (1%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYR 110 QEL Y+ ++ R EEK L G + + IGQEA+ VG+ +L + ++ +R Sbjct: 16 QEL--YKSIVKPRMIEEKMLILLRQGRISKWFG-GIGQEAIAVGVTKALDADEYILPMHR 72 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 G + + + ++ G++GG +KG+ S H + + G +G Q++L GI Sbjct: 73 NLGVFTSREIPLHNLFSQFQGKKGGYTKGRDRSFHFGTQDHHIVGMISHLGPQLALADGI 132 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A ANK + + K+CVV GDG ++G +E+ N+A++W+L VI+VIENN Y + T V+ Sbjct: 133 ALANKLKDNKKVCVVFSGDGGTSEGDFHEALNVASVWDLPVIFVIENNGYGLSTPVNEQF 192 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + RGV + + ++DG +I V +T+ K + + PI++E LT+R RGH + Sbjct: 193 RCERLADRGVGYGMDAYRIDGNNILEVHSTISKLAEEIKENPKPILLECLTFRMRGHEEA 252 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLL 319 Y + E+ ++ + DP++ L Sbjct: 253 SGTKYVPK-ELMDLWAAKDPVKNFEAFLF 280 >gi|307610256|emb|CBW99818.1| hypothetical protein LPW_15801 [Legionella pneumophila 130b] Length = 357 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 89/318 (27%), Positives = 156/318 (49%), Gaps = 21/318 (6%) Query: 43 EVSEFNKEQEL--SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 E+ F Q + Y++M+L R F++KA L G +G + + GQEA+ + +L Sbjct: 24 ELPPFADNQSILKELYKIMVLTRTFDKKAIALQRTGKMGTYAPIN-GQEAISTAIGHALK 82 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D ++ YR++ GV S+I+A G + G + Sbjct: 83 PEDVLVPYYRDYAAQFQRGVKMSEILAFWGGDERGSHYSNNAEDLPICVP---------I 133 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 +Q G+AFA KYR ++ VVC G+G ++G YE+ N+A W L V++V+ NN++ Sbjct: 134 ASQCLHAAGVAFAFKYRNQPRVAVVCIGEGGTSEGDFYEAMNVAGAWKLPVVFVVNNNKW 193 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ + + + +++ ++ PG+Q+DG DI A + + A+ R GP +IE L Sbjct: 194 AISVPIEKQTGSQTIAQKAIAAGFPGVQIDGNDIFAARQVIGDAIEKARQGGGPTLIEAL 253 Query: 281 TYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGDLK---EIEMN 335 TYR H+ +D A Y+ E+ E ++ +PI + + L+ N W S+ + K E Sbjct: 254 TYRLCDHTTADDATRYQPSHEVEEAKAK-EPIVRFKHYLMQQNIWTSQDEEKLVIECSET 312 Query: 336 VRKIINNSVEFAQSDKEP 353 V K ++ E+ + +P Sbjct: 313 VEKAVD---EYLNTKPQP 327 >gi|126664223|ref|ZP_01735215.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Flavobacteria bacterium BAL38] gi|126623755|gb|EAZ94451.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Flavobacteria bacterium BAL38] Length = 658 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 91/312 (29%), Positives = 157/312 (50%), Gaps = 4/312 (1%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 FE E Q L Y+ +L R EEK L G V + IGQEA+ VG+ L + Sbjct: 3 FERKELTNPQLLDLYKKILKPRLIEEKMLILIRQGKVSKWFS-GIGQEAISVGITSVLDK 61 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 + ++ +R G + ++ ++ G++ G +KG+ S H + + G +G Sbjct: 62 DEYILPMHRNLGVFTTRDIPLHRLFSQWQGKKNGFTKGRDRSFHFGTQEYKIIGMISHLG 121 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ + GIA ANK R++ K+ V G+GA ++G +E+ NIAA+W L V++VIENN Y Sbjct: 122 PQLGIADGIALANKLRKNGKVTAVFTGEGATSEGDFHEALNIAAVWELPVLFVIENNGYG 181 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T + N + +GV + + VDG ++ V + + A + P+++E T Sbjct: 182 LSTPTNEQYRCENLADKGVGYGMESHVVDGNNLLEVVHLISELKASMVENPRPVLLEFKT 241 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 +R RGH + Y +E+ +M + DP+E R L S+ + + I ++K I+ Sbjct: 242 FRMRGHEEASGTKY-VPQELMDMWAIKDPVENYRNYLKVTAVLSDEEDEAIRAEIKKEID 300 Query: 342 NSVEFAQSDKEP 353 ++A+ +EP Sbjct: 301 --TDWAKVQEEP 310 >gi|114563106|ref|YP_750619.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella frigidimarina NCIMB 400] gi|114334399|gb|ABI71781.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella frigidimarina NCIMB 400] Length = 392 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 81/284 (28%), Positives = 145/284 (51%), Gaps = 2/284 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA I+G +L + D ++ YREH + G + M ++ + + KG+ Sbjct: 78 FYMTCTGEEASIIGSTAALDKDDVILAQYREHASLRYRGFTTEQFMNQMFSNEKDLGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + + + Q+ TG+A+ K + + + FG+GAA++G + Sbjct: 138 QMPIHYGSRELNYQTISSPLATQIPQATGVAYGMKLQGKRNVAICYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ I+ NN YA+ T A + RGV + + ++VDG D+ AV A Sbjct: 198 LNMAAVLKSPTIFFCRNNGYAISTPTEEQFAGNGIASRGVGYGMHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A A+ H P++IE +TYR HS S DP+ YR++EE + + HDP+++ + ++ Sbjct: 258 TQQARAHALEHNAPVLIEAMTYRLGAHSSSDDPSGYRSKEEEAKWQ-QHDPVKRFKLWMV 316 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + W +E D ++ R+ + +V+ A+ P E+ D+L Sbjct: 317 NKGWITEADEAKLFERYREEVLAAVKVAEKLPIPKLDEIIEDVL 360 >gi|254383354|ref|ZP_04998706.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Streptomyces sp. Mg1] gi|194342251|gb|EDX23217.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Streptomyces sp. Mg1] Length = 412 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 93/320 (29%), Positives = 152/320 (47%), Gaps = 13/320 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ E YR M+L RRF+ +A L G +G + L +GQEA +G +L + D Sbjct: 79 VADITTEDLRGLYRDMVLTRRFDGEATALQRQGELGLWASL-LGQEAAQIGSGRALRDDD 137 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YREHG GVD + ++ G G + H+++ ++G+Q Sbjct: 138 YVFPTYREHGVAWCRGVDPTNLLGMFRGVNHGGWDPTINNFHLYTI---------VIGSQ 188 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A +D + FGDGA++QG V E+F +A++N V++ +NNQ+A+ Sbjct: 189 TLHATGYAMGVAKDGADSAVIAYFGDGASSQGDVAEAFTFSAVYNSPVVFFCQNNQWAIS 248 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 R + +R F PG++VDG D+ A A A+ R +GP ++E TYR Sbjct: 249 EPTER-QMRVPLYQRAQGFGFPGVRVDGNDVLACLAVTRWALERARRGEGPTLVEAYTYR 307 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ S DP YR EE + DPI +++ LL A E + +E + Sbjct: 308 MGAHTTSDDPTKYRRDEETAAWEAK-DPILRLKAHLLATGGADEAFFEGLEAESETLGKR 366 Query: 343 SVEFAQSDKEPDPAELYSDI 362 E ++ +PD ++ ++ Sbjct: 367 VREVVRAMPDPDTMAIFENV 386 >gi|284042036|ref|YP_003392376.1| dehydrogenase E1 component [Conexibacter woesei DSM 14684] gi|283946257|gb|ADB49001.1| dehydrogenase E1 component [Conexibacter woesei DSM 14684] Length = 666 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 108/304 (35%), Positives = 168/304 (55%), Gaps = 9/304 (2%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 AYR M IR FEE+ L G++ G H C GQEA+ VG +L E D+++ YR HG Sbjct: 13 AYRQMATIRAFEERCLDLAREGLIAGSVHPCAGQEAIPVGAVAALGEHDRVLATYRGHGW 72 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 LACGV +++ E+ R GG++ G+GGS ++ S ++ F G + IVGA V + G+A A Sbjct: 73 ALACGVPLDQLLGEICQRAGGVNGGRGGSPYLSSPQHRFAGENSIVGAGVPIADGVALAA 132 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT- 233 R ++ V GDGA +QG +E AA L VI + ENN +A ++RA A Sbjct: 133 AVRGEQRVVVTSIGDGALSQGATHEGLVFAAARRLPVIVICENNGWA---EMTRADAMVR 189 Query: 234 -NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + ++R + I VDG D AV+A + +A A RA +GP+ +E T R GH D Sbjct: 190 GSLAERVAGYGIASRVVDGNDPAAVQAAVAEAAASARAGEGPVFLECATVRLLGHYNRDI 249 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 +YR +++ + + +P+ ++R+ L + A E L +++ V + I+ + ++ E Sbjct: 250 EHYRPKDDRAAAQRD-EPLARMRREL--GESAGE-QLAQVDAEVAQAIDAATAAVRAMPE 305 Query: 353 PDPA 356 PDPA Sbjct: 306 PDPA 309 >gi|160875312|ref|YP_001554628.1| 3-methyl-2-oxobutanoate dehydrogenase [Shewanella baltica OS195] gi|160860834|gb|ABX49368.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella baltica OS195] gi|315267507|gb|ADT94360.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella baltica OS678] Length = 392 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 83/283 (29%), Positives = 144/283 (50%), Gaps = 2/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA IVG +L + D ++ YREH + G + M ++ + + KG+ Sbjct: 78 FYMTCTGEEAAIVGSVAALDQEDVILAQYREHAALRYRGFTTEQFMNQMFSNEKDLGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + + Q+ G+ ++ K + K+ V FG+GAA++G + Sbjct: 138 QMPIHYGSAALHYQTISSPLATQIPQAAGVGYSLKMQGKRKVAVCYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ VI+ NN YA+ T A + RGV + + ++VDG D+ AV A Sbjct: 198 LNMAAVLKCPVIFFCRNNGYAISTPTEEQFAGNGIASRGVGYGMHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A AY H P++IE +TYR HS S DP+ YR+++E + + HDP+++ + L+ Sbjct: 258 TQQARAYAIEHNAPVLIEAMTYRLGAHSSSDDPSGYRSKDEEAKWQ-QHDPVKRFKLWLI 316 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + W +E D ++ R+ + +V+ A+ P E+ D+ Sbjct: 317 NKGWLAEADDVKLHEKYREEVLAAVKVAEKIPVPMLDEIIEDV 359 >gi|299066809|emb|CBJ38003.1| putative pyruvate dehydrogenase e1 component (Alpha subunit) oxidoreductase protein [Ralstonia solanacearum CMR15] Length = 379 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 93/312 (29%), Positives = 157/312 (50%), Gaps = 14/312 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ YR M+L R F+ KA L G +G F +GQEA+ VG+ ++ D + +YR+H Sbjct: 52 LALYRAMVLTRAFDTKAIALQRTGKLGTFAS-SVGQEAIGVGVASAMRAEDVLFPSYRDH 110 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L GV MAE GG +G F+ + +G QV G A+ Sbjct: 111 SAQLLRGVS----MAESLLYWGGDERGS-----CFAAVREDFPNCVPIGTQVCHAAGAAY 161 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + RR ++ V FGDG ++G YE N+A +W ++ ++ NNQ+A+ SR +A Sbjct: 162 AFQLRREPRVAVAVFGDGGTSKGDFYEGMNLAGVWGAPLVLIVNNNQWAISVPRSRQTAA 221 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ I G QVDG D+ AV+ +A+ R+ GP +IE L+YR H+ +D Sbjct: 222 QTLAQKAIAAGIAGRQVDGNDVIAVRQAAQEALDKARSGGGPTLIEALSYRLGDHTTADD 281 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 A YR + + + S +PI ++R L+ N W + +++ + +V Q+ Sbjct: 282 ATRYRDPDSVKQAWS-REPILRLRNYLMRLNAW-DKAQEEQLGRACYAEVEEAVAAYQAV 339 Query: 351 KEPDPAELYSDI 362 +PD + ++ + Sbjct: 340 GQPDTSAMFDHL 351 >gi|307823476|ref|ZP_07653705.1| Pyruvate dehydrogenase (acetyl-transferring) [Methylobacter tundripaludum SV96] gi|307735461|gb|EFO06309.1| Pyruvate dehydrogenase (acetyl-transferring) [Methylobacter tundripaludum SV96] Length = 358 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 99/334 (29%), Positives = 157/334 (47%), Gaps = 37/334 (11%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y ML IRR E+ + Y + HLCIG+EA+ VG+ LT D++ + +R HGH Sbjct: 15 YYQMLRIRRVEQAIAERYQQQEMRCPTHLCIGEEAIAVGISAHLTTQDKVFSNHRGHGHY 74 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D +++AEL G G G+GGSMH+ GF IVG V L G A+A + Sbjct: 75 LAKGGDLRRLLAELYGFAEGCCGGRGGSMHLTDLAAGFIASTPIVGGTVPLAGGYAWAEQ 134 Query: 176 YRRS---------------------------------DKICVVCFGDGAANQGQVYESFN 202 ++S + V+ FGDG +G ++E+ N Sbjct: 135 MKKSGAAQGCASVAGGTTPWMEEVERSRRPEPRTPEATNVVVIFFGDGCFEEGVMHETMN 194 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 AAL L +++V ENNQY++ T ++ + + K + + DG + V A Sbjct: 195 FAALKKLPLLFVCENNQYSVMTPLAERQPERDIYKIAAAHGLQAASGDGNSVEQVYALAQ 254 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGH---SMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 AVA R +GP +E+ T+R+ H + D YR+ E+ + + P+ Q R+ LL Sbjct: 255 AAVANARTGQGPQFLELHTHRWPEHCGPNEDDELGYRSPGELADWKLR-CPLLQTRQALL 313 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + + E +L +E ++ I + ++A P Sbjct: 314 DKRLSDESELTAMEASLADEIEQAFQWALRGSRP 347 >gi|294813826|ref|ZP_06772469.1| Branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Streptomyces clavuligerus ATCC 27064] gi|294326425|gb|EFG08068.1| Branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Streptomyces clavuligerus ATCC 27064] Length = 427 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 100/348 (28%), Positives = 160/348 (45%), Gaps = 19/348 (5%) Query: 22 SAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSA------YRLMLLIRRFEEKAGQLYGM 75 +AK+ S V + EG + +LS YR M+L RRF+ +A L Sbjct: 55 AAKKTQGSEPQLVQLLSPEGKRIEHPEHSIDLSGEELRGLYRDMVLTRRFDAEATALQRQ 114 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 G +G + L +GQEA +G +L + D + YREHG GVD + ++ G G Sbjct: 115 GELGLWASL-LGQEAAQIGSGRALRDDDYVFPTYREHGVAWCRGVDPANLLGMFRGVNHG 173 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG 195 + H+++ ++G+Q TG A +D + FGDGA++QG Sbjct: 174 GWDPTTNNFHLYTI---------VIGSQALHATGYAMGVAKDGADAAVIAYFGDGASSQG 224 Query: 196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIR 255 V E+F A+++N V++ +NNQ+A+ R S + +R + PG++VDG D+ Sbjct: 225 DVAEAFTFASVYNAPVVFFCQNNQWAISEPTERQS-RVPIYRRAEGYGFPGVRVDGNDVL 283 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQV 314 A A A+ R +GP ++E TYR H+ S DP YR EE + DPI ++ Sbjct: 284 ATLAVTRWALERARGGEGPTLVEAFTYRMGAHTTSDDPTRYRHDEERAAWEAK-DPILRL 342 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 R L+ A + +E + E +S EPD ++ + Sbjct: 343 RALLVGEGHADDAFFAALEEESDTLARRVREAVRSMPEPDRLTMFDHV 390 >gi|312134607|ref|YP_004001945.1| transketolase central region [Caldicellulosiruptor owensensis OL] gi|311774658|gb|ADQ04145.1| Transketolase central region [Caldicellulosiruptor owensensis OL] Length = 823 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 110/366 (30%), Positives = 162/366 (44%), Gaps = 68/366 (18%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-------CHLCIGQEAVIVGM 95 E F+ +Q + YR ML+IR FE + G G HL IGQEA VG Sbjct: 35 ERQNFSDDQLIRIYRDMLIIREFETMLSLIKTTGEYNGIKYDYPGPAHLSIGQEAAAVGQ 94 Query: 96 KMSLTEGDQMITAYREHGHILACGV---------DASKIM-------------------- 126 L + D + ++R HG ++A G+ + KIM Sbjct: 95 AFVLDKDDFIFGSHRSHGEVIAKGLSTIEKLSDDELLKIMESYFDGAILRVVEENLKNIS 154 Query: 127 ---------------AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 AE+ GR+ G KG GGSMH+F G Y + IVG + G A Sbjct: 155 SIKELAVNFFLYGTLAEIFGRETGFQKGLGGSMHVFFPPFGIYPNNAIVGGSADIAVGAA 214 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAA------LWN------LNVIYVIENNQ 219 K + + I VV GDG+ G V+E+ +A LW+ L +I+ +NQ Sbjct: 215 LFKKINKKNGIVVVNIGDGSMACGPVWEAMCLATMDQYKKLWDDEYRGGLPIIFNFMDNQ 274 Query: 220 YAMGTSVSRASAQTNFSKR-GVSFNIPGMQ---VDGMDIRAVKATMDKAVAYCRAHKGPI 275 YAMG + + R G N MQ VDG + AV M + +GP+ Sbjct: 275 YAMGGQTRGETMGYDMLARVGAGVNPEQMQAERVDGYNPLAVIDAMKRKKYLLEQKQGPV 334 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +++++TYR GHS SD ++YRT+EEI E + DPI + L+ +E ++EI+ Sbjct: 335 LLDIVTYRLTGHSPSDSSSYRTKEEI-EAWAAQDPIVTYKDELIKAGVVTEEKIQEIQSY 393 Query: 336 VRKIIN 341 V+++I Sbjct: 394 VKELIT 399 >gi|110004302|emb|CAK98640.1| putative pyruvate dehydrogenase e1 component alpha subunit protein [Spiroplasma citri] Length = 367 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 88/299 (29%), Positives = 153/299 (51%), Gaps = 11/299 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 L+AY+LM L RR ++ ++ G + F GQEA V M + +G D +AYR Sbjct: 38 LTAYKLMCLSRRQDDFQNKIQRQGRMLSFLS-STGQEATEVAYGMQIIKGKDWFSSAYRN 96 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 + LA GV IM G + G +G + + + Q S TG+A Sbjct: 97 NAAWLATGVPMRNIMLYWCGNEMGSYIPEGINTLPINIP---------IATQYSHATGLA 147 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 F+ KY + D + + GDG +++G+ YE+ N A L + I+++ENNQYA+ T +A+ Sbjct: 148 FSEKYNKRDGVVITTTGDGGSSEGEFYEAMNFAKLHEVPAIFIVENNQYAISTPSRKATK 207 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 NF+ +G++ + + VDG D AV + +A+ + R +GP +IE TYR HS +D Sbjct: 208 AINFAVKGIAVGMRNILVDGNDFFAVYVAVQEAIKFARKGEGPSLIECSTYRIGAHSSAD 267 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 N E++++ DP+ +++ L+ K SE + ++++ K I + + +++ Sbjct: 268 DPNVYRDEKLHQEALKKDPLIRLKAYLIKQKKWSEKEQEKLDAEQDKFIKDEFAWVEAN 326 >gi|254390345|ref|ZP_05005562.1| branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces clavuligerus ATCC 27064] gi|326442244|ref|ZP_08216978.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces clavuligerus ATCC 27064] gi|197704049|gb|EDY49861.1| branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces clavuligerus ATCC 27064] Length = 392 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 100/348 (28%), Positives = 160/348 (45%), Gaps = 19/348 (5%) Query: 22 SAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSA------YRLMLLIRRFEEKAGQLYGM 75 +AK+ S V + EG + +LS YR M+L RRF+ +A L Sbjct: 20 AAKKTQGSEPQLVQLLSPEGKRIEHPEHSIDLSGEELRGLYRDMVLTRRFDAEATALQRQ 79 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 G +G + L +GQEA +G +L + D + YREHG GVD + ++ G G Sbjct: 80 GELGLWASL-LGQEAAQIGSGRALRDDDYVFPTYREHGVAWCRGVDPANLLGMFRGVNHG 138 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG 195 + H+++ ++G+Q TG A +D + FGDGA++QG Sbjct: 139 GWDPTTNNFHLYTI---------VIGSQALHATGYAMGVAKDGADAAVIAYFGDGASSQG 189 Query: 196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIR 255 V E+F A+++N V++ +NNQ+A+ R S + +R + PG++VDG D+ Sbjct: 190 DVAEAFTFASVYNAPVVFFCQNNQWAISEPTERQS-RVPIYRRAEGYGFPGVRVDGNDVL 248 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQV 314 A A A+ R +GP ++E TYR H+ S DP YR EE + DPI ++ Sbjct: 249 ATLAVTRWALERARGGEGPTLVEAFTYRMGAHTTSDDPTRYRHDEERAAWEAK-DPILRL 307 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 R L+ A + +E + E +S EPD ++ + Sbjct: 308 RALLVGEGHADDAFFAALEEESDTLARRVREAVRSMPEPDRLTMFDHV 355 >gi|217973406|ref|YP_002358157.1| 3-methyl-2-oxobutanoate dehydrogenase [Shewanella baltica OS223] gi|217498541|gb|ACK46734.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella baltica OS223] Length = 392 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 83/283 (29%), Positives = 144/283 (50%), Gaps = 2/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA IVG +L + D ++ YREH + G + M ++ + + KG+ Sbjct: 78 FYMTCTGEEAAIVGSVAALDQEDVILAQYREHAALRYRGFTTEQFMNQMFSNEKDLGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + + Q+ TG+ ++ K + + V FG+GAA++G + Sbjct: 138 QMPIHYGSAALHYQTISSPLATQIPQATGVGYSLKMQGKRNVAVCYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ VI+ NN YA+ T A + RGV + + ++VDG D+ AV A Sbjct: 198 LNMAAVLKCPVIFFCRNNGYAISTPTEEQFAGNGIASRGVGYGMHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A AY H P++IE +TYR HS S DP+ YR+++E + + HDP+++ + L+ Sbjct: 258 TQQARAYAIEHNAPVLIEAMTYRLGAHSSSDDPSGYRSKDEEAKWQ-QHDPVKRFKLWLI 316 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + W +E D ++ R+ + +V+ A+ P E+ D+ Sbjct: 317 NKGWLAEADDVKLHEKYREEVLAAVKVAEKIPVPMLDEIIEDV 359 >gi|147919052|ref|YP_687218.1| pyruvate dehydrogenase complex E1, transketolase alpha subunit [uncultured methanogenic archaeon RC-I] gi|110622614|emb|CAJ37892.1| pyruvate dehydrogenase complex E1, transketolase alpha subunit [uncultured methanogenic archaeon RC-I] Length = 359 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 90/317 (28%), Positives = 165/317 (52%), Gaps = 21/317 (6%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YRLM+ R ++EKA +L G +G + + GQEA+ +G +++ E D M+ +YRE Sbjct: 37 LKMYRLMVQARTYDEKALKLQRGGRMGTYPPIA-GQEAIQIGSALAMAEEDWMVPSYREI 95 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++A GV + G G + VG+Q TG+ + Sbjct: 96 GAMIAKGVPMQTLYMLWMGNDYGNRTPDNVRCLPIAIP---------VGSQALHATGMGW 146 Query: 173 ANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A + ++ +K+ + C FGDGA ++G +E+ N A ++++ V+++ NNQ+A+ T + Sbjct: 147 AARLKK-EKLAITCYFGDGATSRGDFHEAMNFAGVYHVPVVFICSNNQFAISTPNPLQTR 205 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRA----VKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 F+++G+++ IP ++DGMD+ A VK +D+A R +GP IE + YR+ H Sbjct: 206 AETFAQKGIAYGIPSYRLDGMDVLASYVIVKDLLDRA----RNGEGPAFIEAICYRFGPH 261 Query: 288 SMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + SD P YR++ E+ ++R DPI++ R L++ + + +I+ + + Sbjct: 262 TTSDNPDLYRSKGEVEKIRKETDPIDRFRNYLVNKGLWDIDKETRLHDEMDALIDKAAKE 321 Query: 347 AQSDKEPDPAELYSDIL 363 A+ P+ EL+ + Sbjct: 322 AEQAPAPEFEELFKHVF 338 >gi|315504013|ref|YP_004082900.1| pyruvate dehydrogenase (acetyl-transferring) [Micromonospora sp. L5] gi|315410632|gb|ADU08749.1| Pyruvate dehydrogenase (acetyl-transferring) [Micromonospora sp. L5] Length = 376 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 93/309 (30%), Positives = 153/309 (49%), Gaps = 13/309 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M L RR +++A L G +G + C GQEA VG ++ D + +YREH Sbjct: 57 YRGMRLARRLDDEAFALQRQGELGLWLQ-CRGQEAAQVGSVAAVRADDYVFPSYREHAAA 115 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G+ + ++ + G + S H+++ ++ AQ+ TG A + Sbjct: 116 LWRGIGPADLLRQWRGVAHSGWDPEPYSFHIYTL---------VLAAQLLHATGYALGVQ 166 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 SD + V FGDGAA++G E+ NIAA+ +++ +NNQ+A+ T + + +T Sbjct: 167 RDGSDTVVVTYFGDGAASEGDASEAMNIAAVNAAPMVFFCQNNQWAISTPTA-SQTRTPI 225 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 +RG F + VDG D+ AV A + R+ GP I+E TYR GHS S DP Sbjct: 226 HRRGAGFGLRSEWVDGNDVLAVYAVTSAVTEHARSGHGPAIVEATTYRMGGHSTSDDPTR 285 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT +E+ R+ DP+ +V + W+ E L I+ ++ + + + + PD Sbjct: 286 YRTDDELAAWRAR-DPLARVEALMRAEGWSDEAFLGGIQAEADELADRTRRECLALEAPD 344 Query: 355 PAELYSDIL 363 A+ ++ +L Sbjct: 345 LADAFATVL 353 >gi|256380962|ref|YP_003104622.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Actinosynnema mirum DSM 43827] gi|255925265|gb|ACU40776.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Actinosynnema mirum DSM 43827] Length = 397 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 94/314 (29%), Positives = 155/314 (49%), Gaps = 20/314 (6%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L+RR + +A L G +G + L +GQEA VG ++ D +YREHG Sbjct: 70 YRDMVLVRRVDREANALQRKGELGLWAPL-LGQEAAQVGAGRAMRARDMAFPSYREHGVA 128 Query: 116 LACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 GV + +++ G Q G ++ F+ ++G QV TG A Sbjct: 129 WCRGVPPTDLLSMFRGTDQCGWDP----------VEHRFHPYTIVIGNQVLNATGYAMGQ 178 Query: 175 KYRRS-----DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 ++ + + + FGDGA +QG V+E F AA+++ V++ +NNQ+A+ R Sbjct: 179 RFDGAVGDDGGEATMAFFGDGATSQGDVHEGFVWAAVYDAPVVFFCQNNQWAISEPTERQ 238 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 S + +R + PG++VDG D+ A A A+ CR GP++IE TYR H+ Sbjct: 239 S-RLPLYQRARGYGFPGIRVDGNDVLATLAVTRWALDQCRTGNGPVLIEAFTYRMDAHTT 297 Query: 290 S-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 S DP+ YR +E+ E+ DPIE+V+ L+ +WA + +E+ ++ E Sbjct: 298 SDDPSRYRLSDEL-ELWKLKDPIERVKVHLVKQQWADQEFFDHVELEAEELGARLREHCS 356 Query: 349 SDKEPDPAELYSDI 362 S + P ++S + Sbjct: 357 SLEAPPAERIFSQV 370 >gi|194292733|ref|YP_002008640.1| pyruvate dehydrogenase e1 alpha subunit oxidoreductase protein [Cupriavidus taiwanensis LMG 19424] gi|193226637|emb|CAQ72588.1| putative PYRUVATE DEHYDROGENASE E1 COMPONENT (ALPHA SUBUNIT) OXIDOREDUCTASE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 361 Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 93/306 (30%), Positives = 157/306 (51%), Gaps = 14/306 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M+L R+F+ KA L G +G F +GQEA+ VG+ ++ D ++ +YR+H Sbjct: 42 YQAMVLTRQFDLKAIALQRTGKIGTFAS-ALGQEAIGVGVACAMRPEDVLVPSYRDHAAQ 100 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GV M E GG +G G F+ + +G QV G A+A + Sbjct: 101 FVRGV----TMTESLLYWGGDERGSG-----FAAAPHDFANCVPIGTQVCHAAGAAYAFR 151 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R ++ V GDG ++G YE N+A W ++ VI NNQ+A+ S +A Sbjct: 152 LRGEPRVAVCLLGDGGTSKGDFYEGMNMAGAWRAPLVIVINNNQWAISMPRSAQTAAQTL 211 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 +++ ++ IPG QVDG D+ AV+ + +A+A R GP +IE +TYR H+ +D A+ Sbjct: 212 AQKAIAAGIPGEQVDGNDVVAVRHRVGEAIARARDGGGPALIEAITYRLGDHTTADDAS- 270 Query: 296 RTREEIN-EMRSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 R R+E + + H+P+ ++R LL + W + + ++ ++ + +VE + P Sbjct: 271 RYRDEASVKAHWQHEPLLRLRTHLLALHAWDAAREEALVKACSQQ-VAQAVETYLAMPPP 329 Query: 354 DPAELY 359 DPA ++ Sbjct: 330 DPAAMF 335 >gi|300691486|ref|YP_003752481.1| pyruvate dehydrogenase e1 component (alpha subunit) oxidoreductase protein [Ralstonia solanacearum PSI07] gi|299078546|emb|CBJ51201.1| putative pyruvate dehydrogenase e1 component (Alpha subunit) oxidoreductase protein [Ralstonia solanacearum PSI07] Length = 368 Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 89/272 (32%), Positives = 138/272 (50%), Gaps = 11/272 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ YR M+L R F+ KA L G +G F +GQEA+ VG+ ++ D + +YR+H Sbjct: 36 LALYRAMVLTRAFDTKAIALQRTGKLGTFAS-SVGQEAIGVGVASAMRAEDVLFPSYRDH 94 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L GV MAE GG +G F+ + +G QV G A+ Sbjct: 95 SAQLLRGVS----MAESLLYWGGDERGS-----RFAAVREDFPNCVPIGTQVCHAAGAAY 145 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + RR ++ V FGDG ++G YE N+A +WN ++ V+ NNQ+A+ SR +A Sbjct: 146 AFQLRREPRVAVAVFGDGGTSKGDFYEGMNLAGVWNAPLVLVVNNNQWAISVPRSRQTAA 205 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ I G QVDG D+ AV+ +A+ RA GP +IE ++YR H+ +D Sbjct: 206 QTLAQKAIAAGIAGRQVDGNDVIAVRQAALEALDKARAGGGPTLIEAISYRLGDHTTADD 265 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLH-NKW 323 A +I + +PI ++R L N W Sbjct: 266 ATRYRDPDIVKQAWAREPILRLRNYLTRLNAW 297 >gi|302535506|ref|ZP_07287848.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sp. C] gi|302444401|gb|EFL16217.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sp. C] Length = 402 Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 89/277 (32%), Positives = 138/277 (49%), Gaps = 13/277 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ E + YR M+L RRF+ +A L G +G + L +GQEA +G +L + D Sbjct: 69 VADITTEDLRALYRDMVLTRRFDGEATALQRQGELGLWASL-LGQEAAQIGSGRALRDDD 127 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YREHG GVD + ++ G G + H+++ ++G+Q Sbjct: 128 YVFPTYREHGVAWCRGVDPTNLLGMFRGVNHGGWDPNTNNFHLYTI---------VIGSQ 178 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A +D + FGDGA++QG V E+FN +A++N V++ +NNQ+A+ Sbjct: 179 TLHATGYAMGVAKDGADSAVIAYFGDGASSQGDVMEAFNFSAVYNSPVVFFCQNNQWAIS 238 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 R + +R F PG++VDG D+ A A A+ R +GP +IE TYR Sbjct: 239 EPTER-QMRVPLYQRAQGFGFPGIRVDGNDVLACLAVTRWALDRARRGEGPALIEAFTYR 297 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 H+ S DP YR EE + DPI +++ LL Sbjct: 298 MGAHTTSDDPTKYRLDEETAAWEAK-DPILRLKAHLL 333 >gi|312110303|ref|YP_003988619.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Geobacillus sp. Y4.1MC1] gi|311215404|gb|ADP74008.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Geobacillus sp. Y4.1MC1] Length = 331 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 99/313 (31%), Positives = 148/313 (47%), Gaps = 7/313 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 + E L Y MLL R+ +E+ L G + F C GQEA VG +L D + Sbjct: 11 LSDETVLQMYETMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDRTKDYV 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +L G+ ++M + S G G M H KN G V Q Sbjct: 70 LPYYRDMGVVLTFGMTPKELMLSAFAKAEDPSSG-GRQMPGHFGKKKNRIVTGSSPVTTQ 128 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 129 VPHAVGIALAAKMEKKDFVAFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 188 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 +S+ A S R + + +PG VDG D V + +A R +GP +IE ++YR Sbjct: 189 VPISKQLACEKVSDRAIGYGMPGYTVDGNDPLEVYKVVKEAADRARRGEGPTLIETVSYR 248 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 HS D YR+ EE+ E R+ DP+ L ++ KEI V K ++ Sbjct: 249 LTSHSSDDDQRAYRSEEELAEARAK-DPVLLFANYLKETGVLTDEQEKEIHDRVMKQVDE 307 Query: 343 SVEFAQSDKEPDP 355 + ++A+ +P Sbjct: 308 ATDYAEKAPYAEP 320 >gi|256389325|ref|YP_003110889.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Catenulispora acidiphila DSM 44928] gi|256355551|gb|ACU69048.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Catenulispora acidiphila DSM 44928] Length = 375 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 99/350 (28%), Positives = 164/350 (46%), Gaps = 19/350 (5%) Query: 20 SVSAKRAATSSVDCV-----DIPFLEGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLY 73 + + K+A + D V D +E E S + E+ YR M+L+RR + + L Sbjct: 12 TAAKKKAGPADPDLVQLLTPDGDLVEHPEYSIDLTPEEYRGLYRDMVLVRRIDAEGTALQ 71 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQ 133 G +G + L +GQEA VG + T D YREHG VD ++ G Sbjct: 72 RQGELGLWAPL-LGQEAAQVGSGRAQTAEDYAFPTYREHGVAWCRDVDPVNLLGMFRGVN 130 Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 G + H+++ ++G+Q TG A + + + FGDGA++ Sbjct: 131 NGGWDPNEKNFHLYTI---------VIGSQTLHATGYAMGMQRDGREAAVIAYFGDGASS 181 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 QG V E+F A++ N V++ +NNQ+A+ R + +R F PG++VDG D Sbjct: 182 QGDVNEAFVFASVNNAPVVFFCQNNQWAISEPNER-QFRVPLYQRAAGFGFPGVRVDGND 240 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIE 312 + A A A+ R GP+++E TYR H+ S DP YR+ +E+ E ++ DPI Sbjct: 241 VLACLAVTRAALERARTGNGPMLVEAFTYRMGAHTTSDDPTRYRSSDELEEWKAK-DPIL 299 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++R L +K+A E KE++ + + E + +P P ++ + Sbjct: 300 RMRAFLEKSKYADEAFFKEVDTEADTVAADIRERCVTMPDPKPISIFDHV 349 >gi|197116857|ref|YP_002137284.1| branched-chain 2-oxoacid dehydrogenase complex, E1 protein subunit alpha [Geobacter bemidjiensis Bem] gi|197086217|gb|ACH37488.1| branched-chain 2-oxoacid dehydrogenase complex, E1 protein, alpha subunit, putative [Geobacter bemidjiensis Bem] Length = 351 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 91/322 (28%), Positives = 161/322 (50%), Gaps = 14/322 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + +Q Y+LM+L R F+E+A L G +G + + GQEA VG +L D Sbjct: 28 MPELSADQIWRMYQLMVLSRCFDERAVSLQREGRLGTYPPI-RGQEAAQVGSAFALKADD 86 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + ++RE G L G +++ G + ++ F VG+Q Sbjct: 87 WVFPSFREMGVHLTLGYPIPQLLQYWAGDERAQKTPPQLNIFPFCVA---------VGSQ 137 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G A A +YRR V FGDGA ++G +E+ N+A ++ L ++++ +NNQ+A+ Sbjct: 138 IPHAVGAALAARYRRDSAAVAVYFGDGATSKGDFHEAMNMAGVYQLPIVFICQNNQWAIS 197 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + +A + +++ +++ G+QVDG D+ AV +A+ + GP +E LTYR Sbjct: 198 VPLKGQTASASLAQKALAYGFEGVQVDGNDVLAVYRATKQALEKATSGGGPTFLECLTYR 257 Query: 284 YRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHN-KWASEGDLKEIEMNVRKIIN 341 H+ +D A YR+ EE+ + + DPI ++ + L + W E + ++ +I+ Sbjct: 258 MADHTTADDAGRYRSDEEV-ALWNGRDPILRLERFLAASGAWTPEQG-RGVKEEATSLID 315 Query: 342 NSVEFAQSDKEPDPAELYSDIL 363 V ++ PDPAEL+ L Sbjct: 316 RGVGEMEAVPPPDPAELFDATL 337 >gi|225011122|ref|ZP_03701585.1| dehydrogenase E1 component [Flavobacteria bacterium MS024-3C] gi|225004756|gb|EEG42715.1| dehydrogenase E1 component [Flavobacteria bacterium MS024-3C] Length = 658 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 82/301 (27%), Positives = 153/301 (50%), Gaps = 2/301 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + +Q ++ Y+ +L R EEK L G + + IGQEA+ VG+ ++L + ++ Sbjct: 8 LSDQQLITLYKALLKPRMIEEKMLVLLRQGKISKWFS-GIGQEAISVGVTLALNTEEYIL 66 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +R G + + +++ A+ G++ G +KG+ S H ++ G +G Q+ + Sbjct: 67 PMHRNLGVFTSRNIPLNRLFAQWQGKKSGFTKGRDRSFHFGCQESKIIGMISHLGPQLGV 126 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GIA A+K + ++++ V G+GA ++G +E+ NIA++W+L V++ IENN Y + T Sbjct: 127 ADGIALASKLKHNNEVTAVFSGEGATSEGDFHEALNIASVWDLPVLFCIENNGYGLSTPT 186 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S +G+ + + Q+DG +I V + + A R + P++IE +T+R RG Sbjct: 187 SEQYRCKAIVDKGLGYGMEAHQIDGNNIVEVYQKISEIAASVRKNPRPVLIEFITFRRRG 246 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H + Y +E I+ DPI L ++G LK + ++ I ++F Sbjct: 247 HEEASGTKYVPKELISAWEEK-DPITNFENYLFSKNILNDGMLKSFKKEIKTDIQEGLDF 305 Query: 347 A 347 A Sbjct: 306 A 306 >gi|292656337|ref|YP_003536234.1| 2-oxoacid dehydrogenase E1 component subunit alpha [Haloferax volcanii DS2] gi|291372962|gb|ADE05189.1| 2-oxoacid dehydrogenase E1 component alpha subunit [Haloferax volcanii DS2] Length = 348 Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 92/324 (28%), Positives = 162/324 (50%), Gaps = 15/324 (4%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G + +EF + +A R M+ RRF+E+A L G + G+ GQEA +G ++ Sbjct: 9 GLDDTEFTADDARAALRDMIRARRFDERALALQRRGWMSGYPPFR-GQEASQIGAAHAMR 67 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 + D ++ YR + LA GV S I L R+G + +F + Sbjct: 68 DDDVLLPTYRSNALQLARGVPPSDI---LLFRRGHAEYASDHDVPVFPQAV-------PI 117 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 +Q+ G+ A YR D+ +VCFGDGA ++G +E N A +++ +V++ ENN + Sbjct: 118 ASQIPHAAGVGMAANYRGDDRAALVCFGDGATSEGDFHEGLNFAGVFDASVVFFCENNGW 177 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ R +A + + + ++ + GMQVDG D AV+ +++ RA + P++IE L Sbjct: 178 AISLPRERQTASESIAAKADAYGMDGMQVDGNDPLAVREAVERGFEKARAGE-PVLIESL 236 Query: 281 TYRYRGHSMS-DPANYRTRE-EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYR H+ + DP+ YR E ++ E R+ DP+++ + L + + + Sbjct: 237 TYRQGPHTTADDPSRYRDDEPDLPEWRT-RDPLDRFESFCREAGVVDDAALDAMRDDADE 295 Query: 339 IINNSVEFAQSDKEPDPAELYSDI 362 + +VE A++ EP EL+ ++ Sbjct: 296 ELREAVERAEATPEPGTDELFDNV 319 >gi|222528710|ref|YP_002572592.1| transketolase central region [Caldicellulosiruptor bescii DSM 6725] gi|222455557|gb|ACM59819.1| Transketolase central region [Caldicellulosiruptor bescii DSM 6725] Length = 823 Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 109/366 (29%), Positives = 164/366 (44%), Gaps = 68/366 (18%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-------CHLCIGQEAVIVGM 95 E F+ +Q + YR ML+IR FE + G G HL IGQEAV VG Sbjct: 35 ERQNFSDDQLIRIYRDMLIIREFETMLSLIKTTGEYNGIKYDYPGPAHLSIGQEAVAVGQ 94 Query: 96 KMSLTEGDQMITAYREHGHILACGV---------DASKIM-------------------- 126 L + D + ++R HG ++A G+ + KIM Sbjct: 95 AFVLDKDDFIFGSHRSHGEVIAKGLSTIEKLSDNELLKIMESYFDGSILRVVEENLKNIS 154 Query: 127 ---------------AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 AE+ GR+ G KG GGSMH+F G Y + IVG + G A Sbjct: 155 SIKELAVNFFLYGTLAEIFGRETGFQKGLGGSMHVFFPPFGIYPNNAIVGGSADIAVGAA 214 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAA------LWN------LNVIYVIENNQ 219 K + + I VV GDG+ G V+E+ +A+ LW+ L +I+ +NQ Sbjct: 215 LFKKINKKNGIVVVNIGDGSMACGPVWEAMCLASMDQYKKLWDDEYRGGLPIIFNFMDNQ 274 Query: 220 YAMGTSVSRASAQTNFSKR-GVSFNIPGM---QVDGMDIRAVKATMDKAVAYCRAHKGPI 275 YAMG + + R G N M +VDG + AV M + +GP+ Sbjct: 275 YAMGGQTRGETMGYDMLARVGAGVNPEQMHAERVDGYNPLAVIDAMKRKKYLLEQKQGPV 334 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +++++TYR GHS SD ++YRT+EE+ E + DPI + L+ +E ++EI+ Sbjct: 335 LLDIVTYRLTGHSPSDSSSYRTKEEV-EAWAAQDPIVTYKDELIKAGVVTEEKIEEIQSY 393 Query: 336 VRKIIN 341 V+++I Sbjct: 394 VKELIT 399 >gi|14600149|gb|AAK71272.1|AF387640_18 pyruvate dehydrogenase alpha subunit [Coxiella burnetii] Length = 341 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 97/319 (30%), Positives = 163/319 (51%), Gaps = 6/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + ++N+ +EL Y+L L IR EE+ Y G + HL IGQEA+ + + +L D Sbjct: 1 MQDWNQYKEL-LYKL-LRIRMIEEEIVLQYPKGKMRCPTHLSIGQEAIPIMVCENLHNTD 58 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M++ +R H H LA G + ++AEL G+ G + G+GGSM++ GF IV Sbjct: 59 LMVSTHRAHAHYLAKGGNLKALIAELHGKVTGATAGRGGSMNLSDLSVGFVASTAIVANT 118 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V +G G+AF+ K ++S+ I + GD A +G VYES N A L L V++V ENN Y++ Sbjct: 119 VPIGVGLAFSQKLKKSNVITTIFLGDAAVEEGVVYESLNFAVLKRLPVLFVCENNLYSVN 178 Query: 224 TSVS-RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T + R A + +DG DI ++ + + RA+ G +E TY Sbjct: 179 TPLHLRQPANRAIHEMAKGIGAKTQNIDGNDIPTSFHSVCEVMKDLRANGGVWFLEFQTY 238 Query: 283 RYRGHSMSDPANY--RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 R++ H + + R++ E + + DP+ ++ +LL K S ++ + ++ I Sbjct: 239 RFKVHCGPEEETFTDRSKTEFDHWLAR-DPLSLLQSQLLTAKTVSPEEIDKWRHEIQNEI 297 Query: 341 NNSVEFAQSDKEPDPAELY 359 + + FA+S P P + + Sbjct: 298 DEAFTFAESSPYPPPEDRF 316 >gi|256419854|ref|YP_003120507.1| dehydrogenase E1 component [Chitinophaga pinensis DSM 2588] gi|256034762|gb|ACU58306.1| dehydrogenase E1 component [Chitinophaga pinensis DSM 2588] Length = 659 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 88/312 (28%), Positives = 156/312 (50%), Gaps = 2/312 (0%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 FE + + E+ LS YR +L R EEK L G V + IGQEA+ VG ++L Sbjct: 3 FERAHISDEELLSFYRQLLYPRLVEEKMLLLLRQGKVTKWFS-GIGQEAIAVGATLALDM 61 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 + ++ +R G + ++ + G G SKG+ S H S ++ G +G Sbjct: 62 DEWILPLHRNLGVFTTRQMSLQQLFHQWQGSPLGFSKGRERSFHFGSRQHHICGMISHLG 121 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+S+ GIA A+K ++ +K+ + G+G ++G+ +E+ N+AA+W+L VI++IENN Y Sbjct: 122 PQLSIADGIALAHKLKKENKVALAFTGEGGTSEGEFHEALNVAAVWDLPVIFLIENNGYG 181 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T V +R + + GM+++G ++ V + +A + + P++IE +T Sbjct: 182 LSTPVEEQYRCEQLVQRAAGYGMRGMRINGNNLLEVYHAIKEAKRHALQEQQPVLIEAMT 241 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 +R RGH + Y + E + DPI L + + + +K I +++ I+ Sbjct: 242 FRMRGHEEASGTKYVPPALLEEW-AKQDPILHFEGFLQYLRLLDDHKIKNIREQLKQEID 300 Query: 342 NSVEFAQSDKEP 353 N + A S P Sbjct: 301 NDIHEALSATSP 312 >gi|309791647|ref|ZP_07686139.1| pyruvate dehydrogenase (acetyl-transferring) [Oscillochloris trichoides DG6] gi|308226269|gb|EFO80005.1| pyruvate dehydrogenase (acetyl-transferring) [Oscillochloris trichoides DG6] Length = 325 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 91/310 (29%), Positives = 153/310 (49%), Gaps = 12/310 (3%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 A+ M L R +++ L+ + G IG EA+ VG ++L D + +R+ G Sbjct: 11 AHYWMRLTRALDDRGTFLHKQSKIVGGYFSQIGHEAISVGAALALGADDVVAPMHRDLGA 70 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG------AQVSLGT 168 L G+ +I+A+ GR G+S G+ G++H N +GIVG A + + Sbjct: 71 YLVRGITPQRILAQYLGRVDGVSHGRDGNIHGMGDLN-----YGIVGFISHLPASLPVMV 125 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A A + ++ + +GDG ++QG +E+ N AA + L ++++ ENNQYA T V+R Sbjct: 126 GMAHAFVLKGEARVAMGFYGDGGSSQGLSHEALNWAATFRLPMVFICENNQYAYSTPVAR 185 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 N + R + + +PG VDG D AV AV R+ +GP +IE T R RGH+ Sbjct: 186 QMHVANIADRALGYGMPGAVVDGNDFSAVYHAARTAVERARSGEGPTLIECKTMRMRGHA 245 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 + D Y + E + DPI ++ + + L ++ + + ++ + FA+ Sbjct: 246 IHDNMAYVPPALLEEW-AQRDPILRLEAHMRERALLDDAALNDLLVRIETELDAAQAFAE 304 Query: 349 SDKEPDPAEL 358 PDPA L Sbjct: 305 QSPYPDPATL 314 >gi|215919021|ref|NP_819723.2| putative pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coxiella burnetii RSA 493] gi|206583906|gb|AAO90237.2| pyruvate dehydrogenase E1 component alpha subunit [Coxiella burnetii RSA 493] Length = 349 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 97/319 (30%), Positives = 163/319 (51%), Gaps = 6/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + ++N+ +EL Y+L L IR EE+ Y G + HL IGQEA+ + + +L D Sbjct: 9 MQDWNQYKEL-LYKL-LRIRMIEEEIVLQYPKGKMRCPTHLSIGQEAIPIMVCENLHNTD 66 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M++ +R H H LA G + ++AEL G+ G + G+GGSM++ GF IV Sbjct: 67 LMVSTHRAHAHYLAKGGNLKALIAELHGKVTGATAGRGGSMNLSDLSVGFVASTAIVANT 126 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V +G G+AF+ K ++S+ I + GD A +G VYES N A L L V++V ENN Y++ Sbjct: 127 VPIGVGLAFSQKLKKSNVITTIFLGDAAVEEGVVYESLNFAVLKRLPVLFVCENNLYSVN 186 Query: 224 TSVS-RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T + R A + +DG DI ++ + + RA+ G +E TY Sbjct: 187 TPLHLRQPANRAIHEMAKGIGAKTQNIDGNDIPTSFHSVCEVMKDLRANGGVWFLEFQTY 246 Query: 283 RYRGHSMSDPANY--RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 R++ H + + R++ E + + DP+ ++ +LL K S ++ + ++ I Sbjct: 247 RFKVHCGPEEETFTDRSKTEFDHWLAR-DPLSLLQSQLLTAKTVSPEEIDKWRHEIQNEI 305 Query: 341 NNSVEFAQSDKEPDPAELY 359 + + FA+S P P + + Sbjct: 306 DEAFTFAESSPYPPPEDRF 324 >gi|169631991|ref|YP_001705640.1| pyruvate dehydrogenase E1 component alpha subunit [Mycobacterium abscessus ATCC 19977] gi|169243958|emb|CAM64986.1| Pyruvate dehydrogenase E1 component alpha subunit [Mycobacterium abscessus] Length = 364 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 97/279 (34%), Positives = 140/279 (50%), Gaps = 18/279 (6%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+++RR + ++ L G + + L +GQEA VG +L D T++REHG Sbjct: 39 YRDMVVVRRIDNESTALQRQGELALWAPL-LGQEAAQVGSARALRHDDFAFTSFREHGVA 97 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 G++ + A L +G G H + IVGAQ TG A K Sbjct: 98 YCRGIEPT---AMLQFWRGSTQSGWNPRDHNVTAPAI------IVGAQALHATGYAMGVK 148 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + SD + FGDGA +QG V E+F A+ + V++ +NNQ+A+ V R + Sbjct: 149 FDGSDTAVIAYFGDGATSQGDVSEAFAFASSFGAPVVFFCQNNQWAISEPV-RVQSHLPL 207 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + RG+ F +PG+QVDG D+ AV A A+ R GP +IE +TYR H+ S DP Sbjct: 208 AARGIGFGVPGIQVDGNDVLAVTAATRMALRRAREGSGPTLIEAVTYRMGPHTTSDDPTK 267 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 YR E++E R+ DP+ +V K L S G L E E Sbjct: 268 YRNAAELDEWRAK-DPLARVEKYL-----ESRGALSESE 300 >gi|316932799|ref|YP_004107781.1| pyruvate dehydrogenase [Rhodopseudomonas palustris DX-1] gi|315600513|gb|ADU43048.1| Pyruvate dehydrogenase (acetyl-transferring) [Rhodopseudomonas palustris DX-1] Length = 324 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 151/308 (49%), Gaps = 5/308 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 ML IR EE YG + HL +GQEAV L D ++ +R H H LA Sbjct: 13 MLRIRSVEETIAARYGEQKMRCPTHLSVGQEAVAAAAGAVLRPTDLAVSGHRAHAHYLAK 72 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G ++AE+ G+ G ++GKGGSMH+ GF G IVG V +G G+++ K Sbjct: 73 GGSLKAMIAEIYGKVTGCARGKGGSMHLIDESVGFMGSTAIVGGTVPVGVGLSYPMKLNT 132 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS-RASAQTNFSK 237 + +I V GD G +ES N A + L V+++ ENN Y++ + +S R S+ Sbjct: 133 TGQIACVFLGDAVPETGVFFESVNFAVVKQLPVLFLCENNGYSVYSPLSVRQPPGRKLSE 192 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH--SMSD-PAN 294 F + DG D RAV A + + VA R+ +GP E TYR+R H M D Sbjct: 193 LVAGFGLTTHHGDGNDARAVYAALSEGVAAIRSGEGPRFYEFETYRWREHCGPMYDNDLG 252 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR+ E E DP+ +++ L+ ++ D+ +++ + I + FA+S P Sbjct: 253 YRSVAEF-EAWKLRDPVPALQRALITEAIVTDADVADMQATIDAEIEEAFAFAESSPFPP 311 Query: 355 PAELYSDI 362 P + ++D+ Sbjct: 312 PEDAFTDV 319 >gi|212635405|ref|YP_002311930.1| 3-methyl-2-oxobutanoate dehydrogenase [Shewanella piezotolerans WP3] gi|212556889|gb|ACJ29343.1| 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) [Shewanella piezotolerans WP3] Length = 392 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 80/283 (28%), Positives = 146/283 (51%), Gaps = 2/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA I+G +L +GD ++ YREH + G + M ++ + + KG+ Sbjct: 78 FYMTCTGEEASIIGSTAALDDGDVILAQYREHAALRYRGFTTEQFMNQMFSNEKDLGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + + Q+ TG+A++ K ++ I + FG+GAA++G + Sbjct: 138 QMPIHYGSEALNYQTISSPLATQIPQATGVAYSLKMQKKRNIAICYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ N VI+ NN YA+ T + + RG + + ++VDG D+ AV A Sbjct: 198 LNMAAVLNSPVIFFCRNNGYAISTPTEEQFSGNGIASRGPGYGMHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A AY + P++IE +TYR HS S DP+ YR+++E + + HDP+++ + ++ Sbjct: 258 TQQARAYALDNNAPVLIEAMTYRLGAHSSSDDPSGYRSKDEEAKWQ-QHDPVKRFKLWMI 316 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + W +E ++ + R+ + ++ A+ P EL D+ Sbjct: 317 NKGWLNEKQDADLYVKYREEVLAELKVAEKVPLPHLDELIQDV 359 >gi|302871318|ref|YP_003839954.1| Transketolase central region [Caldicellulosiruptor obsidiansis OB47] gi|302574177|gb|ADL41968.1| Transketolase central region [Caldicellulosiruptor obsidiansis OB47] Length = 823 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 110/366 (30%), Positives = 162/366 (44%), Gaps = 68/366 (18%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-------CHLCIGQEAVIVGM 95 E F+ +Q + YR ML+IR FE + G G HL IGQEA VG Sbjct: 35 ERQNFSDDQLIRIYRDMLIIREFETMLSLIKTTGEYNGIKYDYPGPAHLSIGQEAAAVGQ 94 Query: 96 KMSLTEGDQMITAYREHGHILACGV---------DASKIM-------------------- 126 L + D + ++R HG ++A G+ + KIM Sbjct: 95 AFVLDKDDFIFGSHRSHGEVIAKGLSTIEKLSDDELLKIMESYFDGAILRVVEENLKNIS 154 Query: 127 ---------------AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 AE+ GR+ G KG GGSMH+F G Y + IVG + G A Sbjct: 155 SIKELSVNFFLYGALAEIFGRETGFQKGLGGSMHVFFPPFGIYPNNAIVGGSADIAVGAA 214 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAA------LWN------LNVIYVIENNQ 219 K + + I VV GDG+ G V+E+ +A LW+ L +I+ +NQ Sbjct: 215 LFKKINKKNGIVVVNIGDGSMACGPVWEAMCLATMDQYKKLWDEEYRGGLPIIFNFMDNQ 274 Query: 220 YAMGTSVSRASAQTNFSKR-GVSFNIPGM---QVDGMDIRAVKATMDKAVAYCRAHKGPI 275 YAMG + + R G N M +VDG + AV M + +GP+ Sbjct: 275 YAMGGQTRGETMGYDMLARVGAGVNPEQMHAERVDGYNPLAVIDAMKRKKYLLEQKQGPV 334 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +++++TYR GHS SD ++YRT+EEI E + DPI R L+ +E ++EI+ Sbjct: 335 LLDIVTYRLTGHSPSDSSSYRTKEEI-EAWAVQDPIVTYRDELIRAGIVTEEKIQEIQSY 393 Query: 336 VRKIIN 341 V+++I Sbjct: 394 VKELIT 399 >gi|260545142|ref|ZP_05820963.1| dehydrogenase [Brucella abortus NCTC 8038] gi|260756178|ref|ZP_05868526.1| pyruvate/2-oxoglutarate dehydrogenase complex [Brucella abortus bv. 6 str. 870] gi|260760453|ref|ZP_05872801.1| dehydrogenase E1 component [Brucella abortus bv. 4 str. 292] gi|260763694|ref|ZP_05876026.1| pyruvate/2-oxoglutarate dehydrogenase complex [Brucella abortus bv. 2 str. 86/8/59] gi|260882002|ref|ZP_05893616.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella abortus bv. 9 str. C68] gi|260098413|gb|EEW82287.1| dehydrogenase [Brucella abortus NCTC 8038] gi|260670771|gb|EEX57711.1| dehydrogenase E1 component [Brucella abortus bv. 4 str. 292] gi|260674115|gb|EEX60936.1| pyruvate/2-oxoglutarate dehydrogenase complex [Brucella abortus bv. 2 str. 86/8/59] gi|260676286|gb|EEX63107.1| pyruvate/2-oxoglutarate dehydrogenase complex [Brucella abortus bv. 6 str. 870] gi|260871530|gb|EEX78599.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella abortus bv. 9 str. C68] Length = 667 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 4/225 (1%) Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 ++MAE+ G G G+GGSMHM +G G IVG + G A A+K I Sbjct: 66 RLMAEIMGLNTGYCGGRGGSMHMRDAASGIAGTSAIVGGNIPHAAGYALADKILNRKGIS 125 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 V FGDGA+ QG YE+ NIAAL+ L VI+ +ENN YA+ T + A+ +T + RG Sbjct: 126 VAFFGDGASLQGATYEAMNIAALYRLPVIFYVENNLYAVSTHIQDATRETRIASRGPMLG 185 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN---YRTREE 300 G++ DGMDI +V M +A GP++IE YRY S S + YRTREE Sbjct: 186 FTGIECDGMDILSVHQAMREACRIIEEEGGPVVIEAQCYRYLHQSGSKSGSDFGYRTREE 245 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 E +S DPI +RL A + + +I+ V + + E Sbjct: 246 EEEWKSR-DPIALAERRLKELGIAGDAEFLKIDERVTAAVQAAGE 289 >gi|256394206|ref|YP_003115770.1| dehydrogenase E1 component [Catenulispora acidiphila DSM 44928] gi|256360432|gb|ACU73929.1| dehydrogenase E1 component [Catenulispora acidiphila DSM 44928] Length = 320 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 88/254 (34%), Positives = 132/254 (51%), Gaps = 12/254 (4%) Query: 58 LMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 L+LLIR FE + +L+ G + G H C+GQE + V + L E D + +R HGH LA Sbjct: 35 LLLLIRHFELELLELFSRGELNGTTHTCLGQEYIPVAVSGLLREEDFVFGNHRSHGHYLA 94 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 D ++AE+ GR+G I G GGS H+ Y G+ G + + G A R Sbjct: 95 RHRDPHGLLAEIMGREGAICDGVGGSQHIHRAG---YLSTGVQGQSLPIAAGTAL--HLR 149 Query: 178 RSDKICVVC--FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R+ + C GDG +G VYE+ N+AALW L ++ V+ENN A T +R A T Sbjct: 150 RTSPGALACAYIGDGTWGEGAVYEALNLAALWRLPLLVVVENNGIAQSTPTTRHLAGT-I 208 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + R +F I + VD +D+ ++ + + R+ P+++E T+R HS D + Sbjct: 209 AGRAAAFGIRHIGVDSLDVSEIRDALAPEIDLVRS-GAPLVVEFATHRLGPHSKGD--DT 265 Query: 296 RTREEINEMRSNHD 309 R+ +EI RS HD Sbjct: 266 RSPQEIQNARS-HD 278 >gi|189023159|ref|YP_001932900.1| dehydrogenase complex, E1 component, dehydrogenase [Brucella abortus S19] gi|254690607|ref|ZP_05153861.1| dehydrogenase complex, E1 component, dehydrogenase [Brucella abortus bv. 6 str. 870] gi|254699197|ref|ZP_05161025.1| dehydrogenase complex, E1 component, dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|254732642|ref|ZP_05191220.1| dehydrogenase complex, E1 component, dehydrogenase [Brucella abortus bv. 4 str. 292] gi|256255787|ref|ZP_05461323.1| dehydrogenase complex, E1 component, dehydrogenase [Brucella abortus bv. 9 str. C68] gi|18092576|gb|AAL59351.1|AF454951_29 putative TPP-dependent dehydrogenase E1 component [Brucella abortus] gi|189021733|gb|ACD74454.1| dehydrogenase complex, E1 component, dehydrogenase [Brucella abortus S19] Length = 651 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 4/225 (1%) Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 ++MAE+ G G G+GGSMHM +G G IVG + G A A+K I Sbjct: 50 RLMAEIMGLNTGYCGGRGGSMHMRDAASGIAGTSAIVGGNIPHAAGYALADKILNRKGIS 109 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 V FGDGA+ QG YE+ NIAAL+ L VI+ +ENN YA+ T + A+ +T + RG Sbjct: 110 VAFFGDGASLQGATYEAMNIAALYRLPVIFYVENNLYAVSTHIQDATRETRIASRGPMLG 169 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN---YRTREE 300 G++ DGMDI +V M +A GP++IE YRY S S + YRTREE Sbjct: 170 FTGIECDGMDILSVHQAMREACRIIEEEGGPVVIEAQCYRYLHQSGSKSGSDFGYRTREE 229 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 E +S DPI +RL A + + +I+ V + + E Sbjct: 230 EEEWKSR-DPIALAERRLKELGIAGDAEFLKIDERVTAAVQAAGE 273 >gi|56964216|ref|YP_175947.1| branched-chain alpha-keto acid dehydrogenase E1 component alpha chain [Bacillus clausii KSM-K16] gi|56910459|dbj|BAD64986.1| branched-chain alpha-keto acid dehydrogenase E1 component alpha chain [Bacillus clausii KSM-K16] Length = 333 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 150/309 (48%), Gaps = 9/309 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 Y+ MLL RR +E+ L G + F C GQEA VG +L D ++ YR+ G Sbjct: 20 YKTMLLARRIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALNRDVDYVLPYYRDMGV 78 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGAQVSLGTGIA 171 +LA G+ A +M L+G GG H KN G V QV GI+ Sbjct: 79 VLAFGMSARDLM--LSGFAKAEDPSSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGIS 136 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A + + + + FG+G++NQG +E N A + L VI++ ENN+YA+ + + A Sbjct: 137 LAGRLEGKNFVTLTTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAISVPIEKQLA 196 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + + R V + +PG+ VDG D AV + A R +GP +IE ++YR HS D Sbjct: 197 CEHVADRAVGYGMPGVTVDGNDPLAVYEAVKTAADRARRGEGPSLIETVSYRLTPHSSDD 256 Query: 292 PAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 YR+REE+ + + DP+ LL + ++ +E V++I++ + ++A+ Sbjct: 257 DDRAYRSREEVAKAKEK-DPLATFATYLLESGTIDATGMETLEEEVKQIVDEATDYAEKA 315 Query: 351 KEPDPAELY 359 P Y Sbjct: 316 AYAAPETAY 324 >gi|295399094|ref|ZP_06809076.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Geobacillus thermoglucosidasius C56-YS93] gi|294978560|gb|EFG54156.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Geobacillus thermoglucosidasius C56-YS93] Length = 331 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/313 (31%), Positives = 148/313 (47%), Gaps = 7/313 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 + E L Y MLL R+ +E+ L G + F C GQEA VG +L D + Sbjct: 11 LSDETVLQMYETMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDRTKDYV 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +L G+ ++M + S G G M H KN G V Q Sbjct: 70 LPYYRDMGVVLTFGMTPKELMLSAFAKAEDPSSG-GRQMPGHFGKKKNRIVTGSSPVTTQ 128 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 129 VPHAVGIALAAKMEKKDFVAFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 188 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 +S+ A S R + + +PG VDG D V + +A R +GP ++E ++YR Sbjct: 189 VPISKQLACEKVSDRAIGYGMPGYTVDGNDPLEVYKVVKEAADRARRGEGPTLVETVSYR 248 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 HS D YR+ EE+ E R+ DP+ L ++ KEI V K ++ Sbjct: 249 LTSHSSDDDQRAYRSEEELAEARAK-DPVLLFANYLKETGVLTDEQEKEIHDRVMKQVDE 307 Query: 343 SVEFAQSDKEPDP 355 + ++A+ +P Sbjct: 308 ATDYAEKAPYAEP 320 >gi|320009810|gb|ADW04660.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces flavogriseus ATCC 33331] Length = 386 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 100/341 (29%), Positives = 157/341 (46%), Gaps = 19/341 (5%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSA------YRLMLLIRRFEEKAGQLYG 74 AK S V + EG V + E +LSA YR M+L RRF+ +A L Sbjct: 23 TPAKTQEGSGPQLVQLLTPEGERVEHPDFEIDLSAEELRGLYRDMVLTRRFDAEATALQR 82 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G +G + L +GQEA +G +L + D + YREHG GVD + ++ G Sbjct: 83 QGELGLWASL-LGQEAAQIGSGRALRDDDYVFPTYREHGVAWCRGVDPTNLLGMFRGVNH 141 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G + H+++ ++G+Q TG A +D + FGDGA++Q Sbjct: 142 GGWDPNTNNFHLYTI---------VIGSQTLHATGYAMGVAKDGADSAVIAYFGDGASSQ 192 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G V E+F +A++N V++ +NNQ+A+ + + + +R F PG++VDG D+ Sbjct: 193 GDVAEAFTFSAVYNAPVVFFCQNNQWAISEPTEKQT-RVPLYQRAQGFGFPGVRVDGNDV 251 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQ 313 A A A+ R +GP ++E TYR H+ S DP YR EE + DPI + Sbjct: 252 LACLAVTRSALERARRGEGPTLVEAFTYRMGAHTTSDDPTKYRADEERAAWEAK-DPILR 310 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 +R L + A +E + E ++ +PD Sbjct: 311 LRTYLEKQELADAAFFTALEEESETLGKRVREAVRAMPDPD 351 >gi|312128170|ref|YP_003993044.1| transketolase central region [Caldicellulosiruptor hydrothermalis 108] gi|311778189|gb|ADQ07675.1| Transketolase central region [Caldicellulosiruptor hydrothermalis 108] Length = 823 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 109/366 (29%), Positives = 164/366 (44%), Gaps = 68/366 (18%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-------CHLCIGQEAVIVGM 95 E F+ +Q + YR ML+IR FE + G G HL IGQEA VG Sbjct: 35 ERQNFSDDQLIRIYRDMLIIREFETMLSLIKTTGEYNGIKYDYPGPAHLSIGQEAAAVGQ 94 Query: 96 KMSLTEGDQMITAYREHGHILACGV---------DASKIM-------------------- 126 L + D + ++R HG ++A G+ + KIM Sbjct: 95 AFVLDKDDFIFGSHRSHGEVIAKGLSTIEKLSDNELLKIMESYFDGAILRVVEENLKNIS 154 Query: 127 ---------------AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 AE+ GR+ G KG GGSMH+F G Y + IVG + G A Sbjct: 155 SIKELAVNFFLYGTLAEIFGRETGFQKGLGGSMHVFFPPFGIYPNNAIVGGSADIAVGAA 214 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAA------LWN------LNVIYVIENNQ 219 K + + I VV GDG+ G V+E+ +A+ LW+ L +I+ +NQ Sbjct: 215 LFKKINKKNGIVVVNIGDGSMACGPVWEAMCLASMDQYKKLWDDEYRGGLPIIFNFMDNQ 274 Query: 220 YAMGTSVSRASAQTNFSKR-GVSFNIPGM---QVDGMDIRAVKATMDKAVAYCRAHKGPI 275 YAMG + + R G N M +VDG + AV M + + +GP+ Sbjct: 275 YAMGGQTRGETMGYDMLARVGAGVNPEQMHAERVDGYNPLAVIDAMKRKKYLLQQKQGPV 334 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +++++TYR GHS SD ++YRT+EEI E + DPI + L+ +E ++EI+ Sbjct: 335 LLDIVTYRLTGHSPSDSSSYRTKEEI-EAWAAQDPIVTYKDELIKAGVVTEEKIEEIQSY 393 Query: 336 VRKIIN 341 V+++I Sbjct: 394 VKELIT 399 >gi|220923297|ref|YP_002498599.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Methylobacterium nodulans ORS 2060] gi|219947904|gb|ACL58296.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium nodulans ORS 2060] Length = 365 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 100/317 (31%), Positives = 171/317 (53%), Gaps = 20/317 (6%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 ++ YR M+L+R F++KA L G +G + + +GQEAV V + ++ E D ++ +YR++ Sbjct: 45 IALYRAMVLLRLFDKKAVALQRTGRLGTYA-VSLGQEAVSVAIASAMREEDVLLPSYRDN 103 Query: 113 GHILACGVDASKIMAELTGRQGGISKGK--GGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 G +L GV +I+ GG +G G +H F VG+Q G+ Sbjct: 104 GALLWRGVKLEEILLFW----GGDERGNCFSGPVHDFPFCVP-------VGSQAPHAAGV 152 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A+A K R+ + V FGDGA ++G VYE+ N A + L V++V NNQ+A+ + + Sbjct: 153 AYALKLRKKPHVAVCLFGDGATSKGDVYEAMNFAGVHKLPVVFVTTNNQWAISVPLRLQT 212 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + +++ ++ G QVDG D+ A++A ++A+A R KGP IE +TYR H+ S Sbjct: 213 SSETLAQKAIAAGFTGEQVDGSDVVAMRAAAEEAIAAARDGKGPRFIEAVTYRLGDHTTS 272 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE--FA 347 D A+ YR+ +E+ + R +PI ++R L+ K + D + + + I +VE A Sbjct: 273 DDASRYRSADEV-QARWKEEPIARLRAYLVAQKMWGKADEERLATECHERIEAAVERYLA 331 Query: 348 QSDKEPDPA--ELYSDI 362 + + P+ LY+D+ Sbjct: 332 TAPRRPETMFDHLYADL 348 >gi|15615326|ref|NP_243629.1| branched-chain alpha-keto acid dehydrogenase E1 [Bacillus halodurans C-125] gi|10175384|dbj|BAB06482.1| branched-chain alpha-keto acid dehydrogenase E1 [Bacillus halodurans C-125] Length = 330 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/316 (31%), Positives = 151/316 (47%), Gaps = 9/316 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 + E + Y MLL R+ +E+ L G + F C GQEA VG +L D + Sbjct: 11 LSDETVVHMYETMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDRTKDYI 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGA 162 + YR+ G +L G+ A +M L+G GG H S K G V Sbjct: 70 LPYYRDMGVVLTFGMTAKDLM--LSGFAKAEDPNSGGRQMPGHFGSKKLRIVTGSSPVTT 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV GIA A K + D I FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 128 QVPHAVGIALAGKMKGEDFITFTTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + A S R + + +PG+ VDG D AV + +A R +GP +IE ++Y Sbjct: 188 SVPIEKQLACEKVSDRAIGYGMPGVTVDGNDPLAVYEAVKQAADRARRGEGPSLIETVSY 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D YR+REE+ E + +D + + LL +E + ++ V ++N Sbjct: 248 RLTPHSSDDDDRAYRSREEVEEAK-KYDALITFAEYLLETGALTEEGKEAMDKRVSDMVN 306 Query: 342 NSVEFAQSDKEPDPAE 357 + E+A+ DP + Sbjct: 307 EATEYAERAPYADPEQ 322 >gi|239828461|ref|YP_002951085.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacillus sp. WCH70] gi|239808754|gb|ACS25819.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. WCH70] Length = 360 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/273 (30%), Positives = 148/273 (54%), Gaps = 11/273 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +F+ E ++ Y+ M R +E+ ++ G +G + GQEA +G ++L + D Sbjct: 26 LQQFSDEFLVTLYKWMRKARVVDERLLKMQRQGRIGTYAPFS-GQEAAQIGSVLALEKED 84 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +YRE LA G+ ++I + G G + +++F + I+GAQ Sbjct: 85 WIFPSYREIAACLAHGLPLTQIFHYVRGHVLGGRTPE--HLNIFPIQI-------IIGAQ 135 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A+A K + ++ V FGDGA ++G +E+ N A+++ + VI+ +NNQYA+ Sbjct: 136 TLHATGCAWAAKLKGEKQVSVCYFGDGATSEGDFHEAMNFASVYQVPVIFFCQNNQYAIS 195 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + +A +++ +++ + G+ VDG D AV TM +AV R +GP++IE LTYR Sbjct: 196 VPVHKQTASRTIAQKAIAYGMKGVLVDGNDALAVYKTMKEAVDAARNGEGPMLIEALTYR 255 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVR 315 H+ S DP YR+ EE + + DP+ ++R Sbjct: 256 LGPHTTSDDPTKYRSAEEAEQWKRKKDPLHRLR 288 >gi|298204788|emb|CBI25286.3| unnamed protein product [Vitis vinifera] Length = 180 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 74/166 (44%), Positives = 111/166 (66%), Gaps = 10/166 (6%) Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +AALW+L I V ENN Y MGT+ RA+ + KRG +PG++VDGMD+ AVK Sbjct: 1 MAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRG--DYVPGLKVDGMDVLAVK---- 54 Query: 263 KAVAYCRAH---KGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRL 318 +A + + H GPII+EM TYRY GHSMSDP + YRTR+EI+ +R D IE+VRK + Sbjct: 55 QACRFAKEHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDAIERVRKLI 114 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 L ++ ++E +LK IE +R +++++ A+ PDP+EL++++ + Sbjct: 115 LSHELSTEAELKSIEKEIRGQVDDAIARAKESPMPDPSELFTNVYV 160 >gi|56964185|ref|YP_175916.1| pyruvate dehydrogenase E1 component alpha subunit [Bacillus clausii KSM-K16] gi|56910428|dbj|BAD64955.1| pyruvate dehydrogenase E1 component alpha subunit [Bacillus clausii KSM-K16] Length = 361 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 102/315 (32%), Positives = 160/315 (50%), Gaps = 21/315 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + EQ R M+ R ++++A L G +G + + GQEA ++G + +L + D Sbjct: 31 MPDLSDEQLQELMRRMVYTRIWDQRAVSLNRQGRLGFYAPMG-GQEASMLGSQFALEKDD 89 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH--MFSTKNGFYGGHGIVG 161 ++ YR+ I+ G+ + A L R G H F I+G Sbjct: 90 WILPGYRDIPQIVFHGLPLYQ--AFLWSR---------GHFHGGQFPDGLNIAVPQIIIG 138 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 AQ+ G+A K ++ D I + GDG ++QG YE N A +N+ ++V++NN++A Sbjct: 139 AQIVQTAGVALGLKRKKKDNIVITYTGDGGSSQGDFYEGMNFAGAYNVPAVFVVQNNRFA 198 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV-KATMDKAVAYCRAHKGPIIIEML 280 + V + SA +++ V+ I G+QVDGMD+ AV KAT D A A +GP +IE L Sbjct: 199 ISVPVEKQSAAKTIAQKAVAAGIEGIQVDGMDVLAVYKATSD-ARKRALAGEGPTLIETL 257 Query: 281 TYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYRY HS S DP YRT EE +E DP+ + RK L SE E+ ++ Sbjct: 258 TYRYGAHSTSGDDPTRYRTSEEEDEW-GKKDPLIRFRKFLESKNLWSEEKENEVVEQAKE 316 Query: 339 IINNSVEFAQSDKEP 353 I +V+ ++DK P Sbjct: 317 EIKAAVK--EADKTP 329 >gi|56421752|ref|YP_149070.1| pyruvate dehydrogenase E1 (lipoamide) subunit alpha [Geobacillus kaustophilus HTA426] gi|56381594|dbj|BAD77502.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Geobacillus kaustophilus HTA426] Length = 359 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 86/269 (31%), Positives = 144/269 (53%), Gaps = 12/269 (4%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 +++ F+ E L AYR M R +E+ ++ G +G + GQEA +G ++L + Sbjct: 25 KLAAFSDEWLLRAYREMRRARVIDERLLRMQRQGRIGTYAPFS-GQEAAQIGSALALHKD 83 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + +YRE L G+ + + GR G +G +++F T+ I+ A Sbjct: 84 DWIFPSYREVAVCLMHGMPLEQFFHYVQGRLSGKRMPEG--VNIFPTQI-------IIAA 134 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q G A+A+K + + V FGDGA ++G +E+ N AA++N+ VI+ +NNQYA+ Sbjct: 135 QTLHAVGCAWASKLKGEPHVSVAYFGDGATSEGDFHEAMNFAAVYNVPVIFFCQNNQYAI 194 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +A +++ +++ + G+ VDG D+ AV TM +AV R +GP++IE LTY Sbjct: 195 SVPYRKQTASRTIAQKALAYGMKGVLVDGNDVLAVYETMKQAVEAARRGEGPMLIEALTY 254 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDP 310 R H+ + DP YR EE+ R+ DP Sbjct: 255 RLGPHTTADDPTKYRRPEEVETWRAK-DP 282 >gi|299537781|ref|ZP_07051070.1| 2-oxoisovalerate dehydrogenase subunit alpha [Lysinibacillus fusiformis ZC1] gi|298726760|gb|EFI67346.1| 2-oxoisovalerate dehydrogenase subunit alpha [Lysinibacillus fusiformis ZC1] Length = 338 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 149/306 (48%), Gaps = 5/306 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 + E L+ + ML+ RR +E+ L G + F C GQEA VG +L + D + Sbjct: 13 LSNEDVLAMFETMLMARRLDERMWLLNRSGKIP-FVISCQGQEAAQVGAAFALDKSKDYI 71 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 YR+ G +L G+ ++M + + S G+ H KN G V QV Sbjct: 72 APYYRDMGVVLHFGMTPRELMLSAFAKAEDPNSGGRQMPGHFGQKKNRILTGSSPVTTQV 131 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G+A A + ++ D + V G+G++NQG +E N A + L VI ++ENNQYA+ Sbjct: 132 PHAVGVALAGRLQKEDFVSFVTLGEGSSNQGDFHEGANFAGVHKLPVIIMVENNQYAISV 191 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 V R S RG+ + +PG+ VDG + V + +A R +GP +IE +TYR Sbjct: 192 PVERQLGCAKVSDRGIGYGMPGVTVDGKNPLQVYKVVKEAADRARNGEGPSLIETVTYRL 251 Query: 285 RGHSM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D YRT E+I E ++ DPI K L+ ++ EIE V +N + Sbjct: 252 TAHSSDDDDRQYRTAEDIAEGKAK-DPIVLFEKYLMDAGVMTDAIRTEIEERVMAEVNEA 310 Query: 344 VEFAQS 349 ++A++ Sbjct: 311 TDYAEA 316 >gi|55379547|ref|YP_137397.1| pyruvate dehydrogenase E1 component subunit alpha [Haloarcula marismortui ATCC 43049] gi|55232272|gb|AAV47691.1| pyruvate dehydrogenase E1 component alpha subunit [Haloarcula marismortui ATCC 43049] Length = 368 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 88/329 (26%), Positives = 161/329 (48%), Gaps = 16/329 (4%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++G V + + ++ + YR + L R F+++A L G +G + + GQEA VG + Sbjct: 22 VDGATVPDLSDDELVEMYRYLKLGRHFDQRAVSLQRQGRMGTYPPMS-GQEASQVGSAFA 80 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L +GD +YREH + G S + G + G S + F+ Sbjct: 81 LRDGDWAFPSYREHLAMYVKGWPLSDDLLYWMGSESGNSPPEDVQAFSFAVP-------- 132 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + Q+ TG A+A+K + D +V FGDGA ++G +E N A ++++ ++ NN Sbjct: 133 -IATQIPHATGAAWASKLKGDDTAALVYFGDGATSEGDFHEGLNFAGVFDVPAVFFCNNN 191 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV----KATMDKAVAYCRAHKGP 274 Q+A+ R SA +++ ++ G+QVDGMD AV + +DKA P Sbjct: 192 QWAISVPRERQSASETLAQKANAYGFDGVQVDGMDPLAVYQVTREAVDKAHDPPAGELRP 251 Query: 275 IIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 +IE + YR+ H+ + DP+ YR E+ + DPI ++ L + + I+ Sbjct: 252 TMIEAVQYRFGAHTTADDPSVYRDDSEVERWKQK-DPIPRMEAFLRDRGLLDDERVDAID 310 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +V+ + +++ A++ + P P E+++D+ Sbjct: 311 ESVQDEVATAIDEAEATERPKPEEMFADV 339 >gi|254385115|ref|ZP_05000448.1| dehydrogenase [Streptomyces sp. Mg1] gi|194343993|gb|EDX24959.1| dehydrogenase [Streptomyces sp. Mg1] Length = 337 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/280 (32%), Positives = 147/280 (52%), Gaps = 5/280 (1%) Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 H IGQEA VG+ + T D + A+R H LA G D ++AEL GRQ G S G+GG Sbjct: 49 HFSIGQEATAVGVLSATTPRDWVYAAHRTHAPYLAKGGDLRALVAELYGRQDGCSHGRGG 108 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 S+H+ GF G I+G +S+ G +A ++ + FGDGA +G ES N Sbjct: 109 SIHVIDQSVGFAGSGAILGEMISVAVGTGWAFARSGESRVALTFFGDGATEEGVFAESLN 168 Query: 203 IAALWNLNVIYVIENNQYAMGTSVS-RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 IAA+ + V++V ENN Y++ + ++ R A T+ R + + VDG D+ AV+ Sbjct: 169 IAAVQRIPVVFVCENNLYSISSPLTARQPAGTSIRGRAEAAGVRAAAVDGNDVFAVREAA 228 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGH---SMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 A+ +CRA GP ++E+ TYR+R H YR+++EI+ PI++ + Sbjct: 229 AAALRHCRAGNGPYLLELATYRWREHVGPGWDHHHGYRSKQEIDSW-IERCPIQRAVAEV 287 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 + + +++ + ++ I+ +V +A+ PD A L Sbjct: 288 RAEEPGIDDLVRQWQAESQEEIHAAVAYAKELPFPDVAGL 327 >gi|315924038|ref|ZP_07920265.1| pyruvate dehydrogenase (acetyl-transferring) [Pseudoramibacter alactolyticus ATCC 23263] gi|315622664|gb|EFV02618.1| pyruvate dehydrogenase (acetyl-transferring) [Pseudoramibacter alactolyticus ATCC 23263] Length = 334 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/324 (28%), Positives = 164/324 (50%), Gaps = 12/324 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +++KE L +Y + R++E K +L G + GF HL +GQEA+ + + + GD + Sbjct: 15 KYSKEYYLDSYEKLTFARQYEMKVPELLATGKLPGFYHLAVGQEAIQMAIYLEKEAGDWL 74 Query: 106 ITAYREHG-HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 R H + L CG++ E+ GR+ + +G +H+FS +N +G++G Sbjct: 75 SPHPRCHPLYALTCGIN--DFTTEMIGRKSSLCEGVASYVHIFSPENHICPSNGLMGENQ 132 Query: 165 SLGTGIAFA-NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 ++G G A ++ +D ++ GDG +G V E N+ A NL V +IENN + Sbjct: 133 AIGAGFGLAMTEFDDTDGCLILGIGDGTLEEGAVNEVMNVIASRNLKVCMIIENNDITIS 192 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTY 282 T S + +R F +P + DG DI + + + +A +G P +I + TY Sbjct: 193 TRKHDVSRLKDPGERAYGFGLPVVFGDGNDIFEARELI--RIGLEKARRGEPNVISLKTY 250 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R RGH DP YR +E E H+P+++ R+ +++ A+E +L +I+ + I++ Sbjct: 251 RLRGHFEGDPTVYRNPKETEEAMK-HEPVKRCREYIMNLGIATEKELNQIDAEQQAIVDA 309 Query: 343 SVEFAQSDKE--PDPAELYSDILI 364 + FAQ+ K P P ++ L+ Sbjct: 310 A--FAQAVKADLPTPEDVIGPELV 331 >gi|239934270|ref|ZP_04691223.1| branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces ghanaensis ATCC 14672] Length = 316 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 85/285 (29%), Positives = 142/285 (49%), Gaps = 14/285 (4%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 G +GQEA +G +L D + +YR+HG L VD ++ G G Sbjct: 15 GLWPSLLGQEAAQIGAGRALRAEDYVFPSYRDHGVALCRDVDPLHLLRMFRGVSNGGWDP 74 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + H+++ ++G+QV TG A + +VCFGDGA +QG V E Sbjct: 75 ADRNFHLYTL---------VIGSQVLHATGYAMGLAQDGAPGAVLVCFGDGATSQGDVSE 125 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 +FN AA+++ V++ +NNQ+A+ S R + + +R F PG++VDG D+ A +A Sbjct: 126 AFNFAAVFHAPVVFFCQNNQWAISESNDRQT-RVPLHQRAQGFGFPGVRVDGNDVLACRA 184 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 + A+ R+ +GP +IE TYR H+ S DP YR EE+ R DP+ ++R L Sbjct: 185 VTEWALERARSGEGPTLIEAYTYRMGAHTTSDDPTKYRDAEELEHWRLR-DPLARLRTLL 243 Query: 319 LHNKWASEGDLKEIEMNV-RKIINNSVEFAQSDKEPDPAELYSDI 362 H WA + ++ ++ ++ + Q+ +P P L++ + Sbjct: 244 EHRGWADDDFFARVDAECEQRAVHLRTQLRQT-ADPGPEHLFAHV 287 >gi|117920575|ref|YP_869767.1| dehydrogenase, E1 component [Shewanella sp. ANA-3] gi|117612907|gb|ABK48361.1| dehydrogenase, E1 component [Shewanella sp. ANA-3] Length = 392 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 83/283 (29%), Positives = 142/283 (50%), Gaps = 2/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA IVG +L + D ++ YREH + G + M ++ + + KG+ Sbjct: 78 FYMTCTGEEAAIVGSVAALDQEDVILAQYREHAALRYRGFTTEQFMNQMFSNEKDLGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H + + Q+ TG+ ++ K + + V FG+GAA++G + Sbjct: 138 QMPIHYGCAALNYQTISSPLATQIPQATGVGYSLKMQGKRNVAVCYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ VI+ NN YA+ T A + RGV + + ++VDG D+ AV A Sbjct: 198 LNMAAVLKCPVIFFCRNNGYAISTPTEEQFAGNGIASRGVGYGMHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A AY H P++IE +TYR HS S DP+ YR++EE + + HDP+++ + L+ Sbjct: 258 TQQARAYAIEHNAPVLIEAMTYRLGAHSSSDDPSGYRSKEEEAKWQ-QHDPVKRFKLWLI 316 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + W +E D + R+ + +V+ A+ P E+ D+ Sbjct: 317 NKGWLAEADDAQRYEKYREEVLAAVKVAEKLPIPMLDEIIEDV 359 >gi|207723513|ref|YP_002253912.1| pyruvate dehydrogenase e1 component (alpha subunit) protein [Ralstonia solanacearum MolK2] gi|206588714|emb|CAQ35677.1| pyruvate dehydrogenase e1 component (alpha subunit) protein [Ralstonia solanacearum MolK2] Length = 368 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 11/272 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ YR M+L R F+ KA L G +G F +GQEA+ VG+ ++ D + +YR+H Sbjct: 36 LALYRAMVLTRAFDTKAIALQRTGKLGTFAS-SVGQEAIGVGVASAMRAEDVLFPSYRDH 94 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L GV MAE GG +G F+ + +G QV G A+ Sbjct: 95 SAQLLRGVS----MAESLLYWGGDERGS-----CFAAVREDFPNCVPIGTQVCHAVGAAY 145 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A RR ++ V FGDG ++G YE N+A +WN ++ ++ NNQ+A+ SR +A Sbjct: 146 AFALRREPRVAVAVFGDGGTSKGDFYEGMNLAGVWNAPLVLIVNNNQWAISVPRSRQTAA 205 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ I G QVDG D+ AV+ +A+ RA G +IE L+YR H+ +D Sbjct: 206 QTLAQKAIAAGIAGRQVDGNDVIAVRQAAQEALDKARAGGGSTLIEALSYRLGDHTTADD 265 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLL-HNKW 323 A +I + +PI ++R L+ N W Sbjct: 266 ATRYRDPDIVKQAWAREPILRLRNYLVRQNAW 297 >gi|46198877|ref|YP_004544.1| pyruvate decarboxylase alpha subunit-like protein [Thermus thermophilus HB27] gi|46196501|gb|AAS80917.1| pyruvate decarboxylase alpha subunit-like protein [Thermus thermophilus HB27] Length = 342 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 88/271 (32%), Positives = 137/271 (50%), Gaps = 12/271 (4%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 +E+ L YR M R F+EKA L G +G + +GQEA VG+ ++L E D ++ + Sbjct: 14 EEEALRLYRAMRRARFFDEKALTLQRQGRLGVYAPF-MGQEAAQVGVALALEERDWVVPS 72 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YRE +LA G+ ++ G +G N + + Q+ Sbjct: 73 YRESAMLLAKGLPIHTLILYWRAHPAGWRFPEG-----VRAVNPYIP----IATQIPQAV 123 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A A +YR D + GDG ++G +E N AA++ V+++++NN YA+ SR Sbjct: 124 GLALAGRYRGEDWVVATSIGDGGTSEGDFHEGLNFAAVFGAPVVFLVQNNGYAISVPKSR 183 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++R + +PG+ VDG D AV KAV R +GP ++E LTYR H+ Sbjct: 184 QMKVDYVARRAEGYGMPGVVVDGNDAFAVYLEAKKAVERARKGEGPTLLEALTYRLAPHT 243 Query: 289 MS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 S DP+ YR++EE R+ DPI ++RK L Sbjct: 244 TSDDPSRYRSKEEEEAWRAK-DPILRLRKAL 273 >gi|55980908|ref|YP_144205.1| pyruvate dehydrogenase (lipoamide) E1-subunit alpha [Thermus thermophilus HB8] gi|55772321|dbj|BAD70762.1| pyruvate dehydrogenase (lipoamide) (EC 1.2.4.1) E1-alpha chain [Thermus thermophilus HB8] Length = 346 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 88/271 (32%), Positives = 137/271 (50%), Gaps = 12/271 (4%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 +E+ L YR M R F+EKA L G +G + +GQEA VG+ ++L E D ++ + Sbjct: 18 EEEALRLYRAMRRARFFDEKALTLQRQGRLGVYAPF-MGQEAAQVGVALALEERDWVVPS 76 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YRE +LA G+ ++ G +G N + + Q+ Sbjct: 77 YRESAMLLAKGLPIHTLILYWRAHPAGWRFPEG-----VRAVNPYIP----IATQIPQAV 127 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A A +YR D + GDG ++G +E N AA++ V+++++NN YA+ SR Sbjct: 128 GLALAGRYRGEDWVVATSIGDGGTSEGDFHEGLNFAAVFGAPVVFLVQNNGYAISVPKSR 187 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++R + +PG+ VDG D AV KAV R +GP ++E LTYR H+ Sbjct: 188 QMKVDYVARRAEGYGMPGVVVDGNDAFAVYLEAKKAVERARKGEGPTLLEALTYRLAPHT 247 Query: 289 MS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 S DP+ YR++EE R+ DPI ++RK L Sbjct: 248 TSDDPSRYRSKEEEEAWRAK-DPILRLRKAL 277 >gi|242021650|ref|XP_002431257.1| 2-oxoisovalerate dehydrogenase, alpha subunit, putative [Pediculus humanus corporis] gi|212516511|gb|EEB18519.1| 2-oxoisovalerate dehydrogenase, alpha subunit, putative [Pediculus humanus corporis] Length = 426 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/316 (30%), Positives = 150/316 (47%), Gaps = 2/316 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 NKE Y+ ML + ++ + G + F G+EA +G +L D + Sbjct: 77 NKEHLEKMYKDMLTLNVMDQILYESQRQGRIS-FYMTNFGEEACQIGSAGALEPEDLIFA 135 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YRE G +L G D M + G + KG+ +H S K F +G Q+ Sbjct: 136 QYREAGVLLYRGYDLDMFMNQCYGNELDEGKGRQMPVHYGSKKLNFVTISSPLGTQLPQA 195 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A+ K + ++ + FG+GAA++G + +FN AA + VI+ NN YA+ T Sbjct: 196 VGAAYQFKISKQNRCVITYFGEGAASEGDAHAAFNFAATLDCPVIFFCRNNCYAISTPCY 255 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + RG+ + IP ++VDG D+ AV + KA + P++IE +TYR H Sbjct: 256 EQYRGDGIAGRGLGYGIPSIRVDGNDLLAVLHSTRKARDLAISENKPVLIEAMTYRIGHH 315 Query: 288 SMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 S S D + YR+ +E+ E S++ PI + R L W +E KE + RK I S Sbjct: 316 STSDDSSTYRSMDEVKEWNSHNHPINRFRNFLEFRGWWNEDMEKEWRSDARKKILKSFNA 375 Query: 347 AQSDKEPDPAELYSDI 362 A+ K+P EL+ D+ Sbjct: 376 AEKKKKPAWKELFYDV 391 >gi|217964482|ref|YP_002350160.1| 2-oxoisovalerate dehydrogenase subunit alpha (branched-chain alpha-keto acid dehydrogenase e1 component alpha chain) (bckdhe1-alpha) [Listeria monocytogenes HCC23] gi|217333752|gb|ACK39546.1| 2-oxoisovalerate dehydrogenase subunit alpha (branched-chain alpha-keto acid dehydrogenase e1 component alpha chain) (bckdhe1-alpha) [Listeria monocytogenes HCC23] gi|307570954|emb|CAR84133.1| branched-chain alpha-keto acid dehydrogenase complex subunit E1 alpha [Listeria monocytogenes L99] Length = 331 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 7/309 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGH 114 Y ML+ RR +E+ L G + F GQE +G + + D + YR+ Sbjct: 17 YETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYALPYYRDLAV 75 Query: 115 ILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +LA G+ A IM + + S G+ H +N V Q TGI A Sbjct: 76 VLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKENRIVTQSSPVTTQFPHATGIGLA 135 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K + G+G++NQG +E N A++ L V++VI NNQYA+ S+ A Sbjct: 136 AKMAGDEIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQYAISVPASKQYAAE 195 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-SMSDP 292 S R + + IPG +VDG ++ V A +A R +GP +IE ++YR+ H S D Sbjct: 196 KLSDRAIGYGIPGERVDGTNMGEVYAAFKRAADRARNGEGPTLIETVSYRFTPHSSDDDD 255 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD-- 350 ++YR+REE++E + DP++ + LL + +E + EIE N+ K +N + ++A+S Sbjct: 256 SSYRSREEVDEAKGK-DPLKIFQAELLEEGYLTEEKIAEIEKNIAKEVNEATDYAESAAY 314 Query: 351 KEPDPAELY 359 EP+ + LY Sbjct: 315 AEPESSLLY 323 >gi|39998110|ref|NP_954061.1| dehydrogenase, E1 component subunits alpha and beta [Geobacter sulfurreducens PCA] gi|39985055|gb|AAR36411.1| dehydrogenase, E1 component, alpha and beta subunits [Geobacter sulfurreducens PCA] Length = 652 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 141/258 (54%), Gaps = 11/258 (4%) Query: 60 LLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACG 119 L IR+ EE+ +L+ G++ G H CIGQE V + +L GD + + +R HGH +A Sbjct: 21 LTIRKVEERLLELFSEGVLNGTIHTCIGQEWTGVAVANALQAGDTVFSNHRGHGHYIALT 80 Query: 120 VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 D ++AE+ G+ G+ G GGS H+ T+N F +GI G V + G A AN + + Sbjct: 81 GDVYGLIAEIMGKDDGVCGGVGGSQHL-HTENFF--SNGIQGGMVPVAAGRALANALQGN 137 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 + I VV GDG +G +YE+FNIA+ W L ++ V+ENNQYA T S A N R Sbjct: 138 NAISVVFIGDGTLGEGVIYETFNIASKWQLPLLVVLENNQYAQSTPTSLTLAG-NIRDRV 196 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS----MSDP--- 292 F I ++ D DI + + +AV R ++ P+++E+ TYR + HS + DP Sbjct: 197 RGFGIEYIKCDTWDIAGLLDSAKEAVDCVRKNQKPVLLEIDTYRLKAHSKGDDLRDPVEI 256 Query: 293 ANYRTREEINEMRSNHDP 310 + Y ++ IN + + P Sbjct: 257 SRYAGQDSINALLESDVP 274 >gi|302769676|ref|XP_002968257.1| hypothetical protein SELMODRAFT_169956 [Selaginella moellendorffii] gi|300163901|gb|EFJ30511.1| hypothetical protein SELMODRAFT_169956 [Selaginella moellendorffii] Length = 391 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/325 (28%), Positives = 154/325 (47%), Gaps = 2/325 (0%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L+G ++ E + + Y M+ ++ F+ + G + F IG+EA+ V + Sbjct: 39 LDGSDIPEVDSSLAVKMYHTMVRLQTFDSIFYEAQRQGRIS-FYLTNIGEEALNVASAAA 97 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 LT+ D + YREHG ++ G + + + G KG+ +H S K ++ Sbjct: 98 LTKDDVVFPQYREHGVLMWRGFTLDEFANQCFSNEAGHGKGRQMPIHYGSEKLNYFTISS 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + Q+ G A+ K R + V FGDG +++G + + N AA+ V++V NN Sbjct: 158 PIATQLPHAVGAAYGLKMDRKNACAVTYFGDGGSSEGDFHAACNFAAVLEAPVLFVCRNN 217 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 YA+ T RG + + ++VDG D AV + A P++IE Sbjct: 218 GYAISTPACEQYKGDGIVVRGRGYGMTSIRVDGNDALAVFKAVSAARKLAVEQSKPVLIE 277 Query: 279 MLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 +TYR HS SD + YR+ EEI RS DP+ + R+ L N W S D KE+ R Sbjct: 278 AMTYRVGHHSTSDDSTKYRSGEEIAHWRSVRDPVLRFRRWLESNAWWSVEDEKELRGAAR 337 Query: 338 KIINNSVEFAQSDKEPDPAELYSDI 362 K + +++ A+ +P +EL++D+ Sbjct: 338 KEVISAMNQAEKKNKPPLSELFTDV 362 >gi|186683365|ref|YP_001866561.1| dehydrogenase, E1 component [Nostoc punctiforme PCC 73102] gi|186465817|gb|ACC81618.1| dehydrogenase, E1 component [Nostoc punctiforme PCC 73102] Length = 311 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 82/234 (35%), Positives = 126/234 (53%), Gaps = 4/234 (1%) Query: 58 LMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 ++L+IR FE +L+ G + G H C+GQE + V +K LT+ D +++ +R HGH LA Sbjct: 25 IILMIRHFELSLLELFSSGKLNGTTHTCLGQEYIPVALKAVLTDSDFILSNHRGHGHYLA 84 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 D ++AE+ G++G + G GGS H++ KN Y GI G + + GIA + + Sbjct: 85 RFEDPEGLLAEIMGKEGAVCHGVGGSQHIYR-KN--YLSTGIQGESLPVAAGIALHLRRQ 141 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + + VV GDG +G VYE+ NIA LW L V+ ++ENN+ A T A T + Sbjct: 142 GNFGMAVVHIGDGTWGEGGVYEALNIAQLWGLPVLVIVENNKIAQSTPTQLQMAGT-IAG 200 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 R F I ++VD +DI ++ + + R P++IE T R HS D Sbjct: 201 RVQGFGINYLKVDSIDINEIRTLISSHIQSARTKSLPLVIEFDTNRVGPHSKGD 254 >gi|290893519|ref|ZP_06556502.1| 2-oxoisovalerate dehydrogenase E1 component [Listeria monocytogenes FSL J2-071] gi|290556864|gb|EFD90395.1| 2-oxoisovalerate dehydrogenase E1 component [Listeria monocytogenes FSL J2-071] Length = 331 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 7/309 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGH 114 Y ML+ RR +E+ L G + F GQE +G + + D + YR+ Sbjct: 17 YETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYALPYYRDLAV 75 Query: 115 ILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +LA G+ A IM + + S G+ H +N V Q GI A Sbjct: 76 VLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKENRIVTQSSPVTTQFPHAAGIGLA 135 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K + G+G++NQG +E N A++ L V++VI NNQYA+ S+ A Sbjct: 136 AKMAGDEIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQYAISVPASKQYAAE 195 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-SMSDP 292 S R + + IPG +VDG ++ AV A +A R +GP +IE ++YR+ H S D Sbjct: 196 KLSDRAIGYGIPGERVDGTNMGAVYAAFKRAADRARNGEGPTLIETVSYRFTPHSSDDDD 255 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD-- 350 ++YR+REE++E + DP++ + LL + +E + EIE N+ K +N + ++A+S Sbjct: 256 SSYRSREEVDEAKGK-DPLKIFQAELLEEGYLTEEKIAEIEKNIAKEVNEATDYAESAAY 314 Query: 351 KEPDPAELY 359 EP+ + LY Sbjct: 315 AEPESSLLY 323 >gi|114047443|ref|YP_737993.1| 3-methyl-2-oxobutanoate dehydrogenase [Shewanella sp. MR-7] gi|113888885|gb|ABI42936.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella sp. MR-7] Length = 392 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 83/283 (29%), Positives = 141/283 (49%), Gaps = 2/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA IVG +L D ++ YREH + G + M ++ + + KG+ Sbjct: 78 FYMTCTGEEAAIVGSVAALDAEDVILAQYREHAALRYRGFTTEQFMNQMFSNEKDLGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H + + Q+ TG+ ++ K + + V FG+GAA++G + Sbjct: 138 QMPIHYGCAALNYQTISSPLATQIPQATGVGYSLKMQGKRNVAVCYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ VI+ NN YA+ T A + RGV + + ++VDG D+ AV A Sbjct: 198 LNMAAVLKCPVIFFCRNNGYAISTPTEEQFAGNGIASRGVGYGMHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A AY H P++IE +TYR HS S DP+ YR++EE + + HDP+++ + L+ Sbjct: 258 TQQARAYAIEHNAPVLIEAMTYRLGAHSSSDDPSGYRSKEEEAKWQ-QHDPVKRFKLWLI 316 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + W +E D + R+ + +V+ A+ P E+ D+ Sbjct: 317 NKGWLAEADDAQCYEKYREEVLAAVKVAEKLPIPMLDEIIEDV 359 >gi|260062847|ref|YP_003195927.1| pyruvate dehydrogenase subunit beta [Robiginitalea biformata HTCC2501] gi|88784415|gb|EAR15585.1| pyruvate dehydrogenase beta subunit [Robiginitalea biformata HTCC2501] Length = 665 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 94/321 (29%), Positives = 157/321 (48%), Gaps = 8/321 (2%) Query: 37 PFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 P +E + +E +L YR ML R EEK L G + + IGQEA+ VG+ Sbjct: 5 PLAFDYETFQVPREMQLRLYREMLRPRLIEEKMLILLRQGKISKWFS-GIGQEAIAVGVA 63 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 SL + ++ +R G V +++ A+ G+ G +KG+ S H S ++ G Sbjct: 64 ASLKPEEFILPMHRNLGAFTFRDVPLNRLFAQWQGKANGFTKGRDRSFHFGSMEHRIVGM 123 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 +G Q+ + GIA ++ + ++ V G+GA ++G +E+ NIA++W L V++ IE Sbjct: 124 ISHLGPQLGVADGIALSDLLQGRSRVTAVFTGEGATSEGDFHEALNIASVWGLPVLFCIE 183 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN Y + T VS N + RG + + +DG +I+ V A + + A R P++ Sbjct: 184 NNGYGLSTPVSEQYNCENLADRGAGYGMESHILDGNNIQEVYARISELCASMRKEPRPVL 243 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI-EMN 335 +E T+R RGH + Y EE+ E DP+E L + G L E+ E+ Sbjct: 244 VEFKTFRMRGHEEASGTRY-VPEEMMEHWGKRDPLENYAAFLRES-----GVLSEVREVR 297 Query: 336 VRKIINNSVEFAQSDKEPDPA 356 ++K I ++ A + +PA Sbjct: 298 IKKEIQEEIDNALDEAFAEPA 318 >gi|85711427|ref|ZP_01042486.1| Alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Idiomarina baltica OS145] gi|85694928|gb|EAQ32867.1| Alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Idiomarina baltica OS145] Length = 395 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 98/343 (28%), Positives = 168/343 (48%), Gaps = 14/343 (4%) Query: 32 DCVDIPFLE----------GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF 81 D V IP L+ G E+ E++K+ + + ML IR +E+ G + F Sbjct: 21 DSVTIPMLQLLKEDGSLHKGVEMPEYDKDLIVKIHDTMLFIRTLDERMIAAQRQGRIS-F 79 Query: 82 CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKG 141 G+EA V +L +GD ++ YRE G + G + M +L + + KG+ Sbjct: 80 YLASRGEEAESVASAAALDQGDMIMGQYREQGALAYRGFTVEQFMNQLFSNEQDLGKGRQ 139 Query: 142 GSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF 201 +H + F +G Q+ TG AF K ++ K + FG+GAA++G + + Sbjct: 140 MPVHYGCRELNFMTISSPLGTQIPQATGYAFGQKMDKTGKCTICYFGEGAASEGDFHAAL 199 Query: 202 NIAALWNLNVIYVIENNQYAMGT-SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+A+++ + VI+ NN YA+ T S + RG+ + I ++VDG D+ AV Sbjct: 200 NMASVYKVPVIFFCRNNGYAISTPSQGEQYGGDGIAPRGIGYGIKTIRVDGNDVFAVLKA 259 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A P++IE ++YR GHS S DP YRTR+E +E + DP+E+++K +L Sbjct: 260 TQEARRLAVEEDEPVLIEAMSYRMSGHSTSDDPTGYRTRDEEDEWKVK-DPLERLQKWML 318 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + W +E + V+ + +++ A+ P EL +D+ Sbjct: 319 NEGWLTEEHITSQHEKVKASVLAALKEAEKVPAPHIDELINDV 361 >gi|325287820|ref|YP_004263610.1| Pyruvate dehydrogenase (acetyl-transferring) [Cellulophaga lytica DSM 7489] gi|324323274|gb|ADY30739.1| Pyruvate dehydrogenase (acetyl-transferring) [Cellulophaga lytica DSM 7489] Length = 658 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 87/307 (28%), Positives = 152/307 (49%), Gaps = 7/307 (2%) Query: 46 EFNKE-----QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 EFN E ++L Y+ M+ R EEK L G + + IGQEA+ VG+ +L Sbjct: 2 EFNNETISSEEQLLLYKRMIKPRLIEEKMLILLRQGKISKWFS-GIGQEAIAVGVTSALQ 60 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 + + ++ +R G + ++ ++ G+ G +KG+ S H + + G + Sbjct: 61 KNEYILPMHRNLGVFTTRDIPLYRLFSQWQGKANGFTKGRDRSFHFGTQEFNIVGMISHL 120 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 G Q+ + GIA ANK + + K+ V G+GA ++G +E+ N+AA+W L V++ IENN Y Sbjct: 121 GPQLGVADGIALANKLKDNSKVTAVFTGEGATSEGDFHEALNVAAVWQLPVLFCIENNGY 180 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 + T + +G+ + I Q+DG +I V + K R + PI+IE L Sbjct: 181 GLSTPTKEQYYCEHLVDKGIGYGIESHQIDGNNILEVYGKVTKLCESIRKNPRPILIEFL 240 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 T+R RGH + Y ++E + DPI L +N ++ + I+ + + I Sbjct: 241 TFRMRGHEEASGTAYVPNSLLDEW-AKKDPIANYEAFLKNNNILTDDLIATIKADFKAEI 299 Query: 341 NNSVEFA 347 N++++ A Sbjct: 300 NDNLQVA 306 >gi|299822987|ref|ZP_07054873.1| 3-methyl-2-oxobutanoate dehydrogenase [Listeria grayi DSM 20601] gi|299816516|gb|EFI83754.1| 3-methyl-2-oxobutanoate dehydrogenase [Listeria grayi DSM 20601] Length = 330 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 86/307 (28%), Positives = 154/307 (50%), Gaps = 5/307 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQ 104 + +KE+ + YR+MLL R+ +E+ L G + F GQE +G + E D Sbjct: 7 DLSKEKAVEMYRVMLLSRKLDERMWLLNRSGKIP-FTISGQGQEIAQIGAAFAFDFEKDY 65 Query: 105 MITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YR+ +LA G+ A ++M + + S G+ H KN V Q Sbjct: 66 ALPYYRDLAVVLAFGMTAKELMLSAFAKAEDPNSGGRQMPAHFGQKKNRIVTQSSPVTTQ 125 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 GI A K ++ D G+G++NQG +E N A++ L V++VI NN+YA+ Sbjct: 126 FPHAAGIGLAAKMKKEDIAIYTSTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNKYAIS 185 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + A + R + + IPG VDG D+ +V + +AV R +GP +IE ++YR Sbjct: 186 VPAEKQYAAKTLADRAIGYGIPGESVDGNDMASVYSAFRRAVERARNGEGPTLIETVSYR 245 Query: 284 YRGHSM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 + HS D +YR++EE++ ++ DP++ + L+ + E ++ +E + + +N Sbjct: 246 FTPHSSDDDDRSYRSKEEVDAAKTK-DPLKIFEQELIEAGFLDEAAIETMEKAINQEVNE 304 Query: 343 SVEFAQS 349 + ++A++ Sbjct: 305 ATDYAEN 311 >gi|290958944|ref|YP_003490126.1| E1-alpha branched-chain alpha keto acid dehydrogenase system [Streptomyces scabiei 87.22] gi|260648470|emb|CBG71581.1| E1-alpha branched-chain alpha keto acid dehydrogenase system [Streptomyces scabiei 87.22] Length = 451 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 91/312 (29%), Positives = 148/312 (47%), Gaps = 13/312 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ ++ YR M+L RRF+ +A L G +G + L +GQEA +G + E D Sbjct: 113 VADITADELRGLYRDMVLTRRFDAEATSLQRQGELGLWASL-LGQEAAQIGSGRATREDD 171 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YREHG GVD + ++ G G + H+++ ++G+Q Sbjct: 172 YVFPTYREHGVAWCRGVDPANLLGMFRGVNNGGWDPNSNNFHLYTI---------VIGSQ 222 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A +D V FGDGA++QG V E+F +A++N V++ +NNQ+A+ Sbjct: 223 TLHATGYAMGIAKDGADSAVVAYFGDGASSQGDVAEAFTFSAVYNAPVVFFCQNNQWAIS 282 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + + + +R F PG++VDG D+ A A+ R +GP ++E TYR Sbjct: 283 EPTEKQT-RVPLYQRAQGFGFPGVRVDGNDVLGCLAVTKWALERARRGEGPTLVEAYTYR 341 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ S DP YR +E + DPI ++R L +EG E+E + Sbjct: 342 MGAHTTSDDPTRYRLDDERVAWEAK-DPIARLRAYLESETDTNEGFFAELEAESEALGRR 400 Query: 343 SVEFAQSDKEPD 354 E ++ +PD Sbjct: 401 VREVVRAMPDPD 412 >gi|209363869|ref|YP_001424107.2| pyruvate dehydrogenase E1 component alpha subunit [Coxiella burnetii Dugway 5J108-111] gi|212212832|ref|YP_002303768.1| pyruvate dehydrogenase E1 component alpha subunit [Coxiella burnetii CbuG_Q212] gi|212219078|ref|YP_002305865.1| pyruvate dehydrogenase E1 component alpha subunit [Coxiella burnetii CbuK_Q154] gi|207081802|gb|ABS78039.2| pyruvate dehydrogenase E1 component alpha subunit [Coxiella burnetii Dugway 5J108-111] gi|212011242|gb|ACJ18623.1| pyruvate dehydrogenase E1 component alpha subunit [Coxiella burnetii CbuG_Q212] gi|212013340|gb|ACJ20720.1| pyruvate dehydrogenase E1 component alpha subunit [Coxiella burnetii CbuK_Q154] Length = 349 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 96/319 (30%), Positives = 162/319 (50%), Gaps = 6/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + ++N+ +EL Y+L L IR EE+ Y G + HL IGQEA+ + + +L D Sbjct: 9 MQDWNQYKEL-LYKL-LRIRMIEEEIVLQYPKGKMRCPTHLSIGQEAIPIMVCENLHNTD 66 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M++ +R H H LA G + ++AEL G+ G + G+GGSM++ GF IV Sbjct: 67 LMVSTHRAHAHYLAKGGNLKALIAELHGKVTGATAGRGGSMNLSDLSVGFVASTAIVANT 126 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V +G G+AF+ K ++S+ I + GD A +G VYES N A L L V++V ENN Y++ Sbjct: 127 VPIGVGLAFSQKLKKSNVITTIFLGDAAVEEGVVYESLNFAVLKRLPVLFVCENNLYSVN 186 Query: 224 TSVS-RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T + R A + +DG DI ++ + + R + G +E TY Sbjct: 187 TPLHLRQPANRAIHEMAKGIGAKTQNIDGNDIPTSFHSVCEVMKDLRENGGVWFLEFQTY 246 Query: 283 RYRGHSMSDPANY--RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 R++ H + + R++ E + + DP+ ++ +LL K S ++ + ++ I Sbjct: 247 RFKVHCGPEEETFTDRSKTEFDHWLAR-DPLSLLQSQLLTAKTVSPEEIDKWRHEIQNEI 305 Query: 341 NNSVEFAQSDKEPDPAELY 359 + + FA+S P P + + Sbjct: 306 DEAFTFAESSPYPPPEDRF 324 >gi|126460013|ref|YP_001056291.1| pyruvate dehydrogenase (acetyl-transferring) [Pyrobaculum calidifontis JCM 11548] gi|126249734|gb|ABO08825.1| Pyruvate dehydrogenase (acetyl-transferring) [Pyrobaculum calidifontis JCM 11548] Length = 356 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 97/322 (30%), Positives = 154/322 (47%), Gaps = 15/322 (4%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E+ +SAY+ M+L R ++ A + MG V G EA VG M+L D + Y Sbjct: 33 EELVSAYKYMVLGRALDKYALLYHRMGKVKSTYAPHEGHEAADVGTAMALRPEDWIAPYY 92 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQ 163 R +L GV + A+ + G KG+ GG G GH ++ A Sbjct: 93 RNLTLLLVRGVPLEVLWAKFMAKLGDPDKGRNLSVEWGGFRQWRLLSFGAPIGHHLIAA- 151 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A+ +YR ++ GDG + Y S +++++L V I NN YA+ Sbjct: 152 ----AGFAYGLRYRGGREVVAAYVGDGGTSTNGFYSSLIFSSVFSLPVAIYIYNNGYAIS 207 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 SR S + R F + G+ DGMD+ A AV Y R++ GP+++E++TYR Sbjct: 208 VPSSRQSKTKRLATRAAGFGVLGIAADGMDLLATLKAAKFAVEYARSN-GPVLVELVTYR 266 Query: 284 YRGHSMSDPAN--YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 + H+ +D YR R E+ E +S DP+ ++ K LL N SEG++K I + + Sbjct: 267 FGPHTTADDPQTKYRDRAEVEEAKSR-DPVARLEKFLLRNGLLSEGEVKSIWQEAEERVK 325 Query: 342 NSVEFAQSDKEPDPAELYSDIL 363 ++ + A+S + P ELY+D+ Sbjct: 326 SAAKQAESLPDVPPEELYTDMF 347 >gi|24373886|ref|NP_717929.1| alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Shewanella oneidensis MR-1] gi|24348305|gb|AAN55373.1|AE015675_5 alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Shewanella oneidensis MR-1] Length = 392 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 83/283 (29%), Positives = 141/283 (49%), Gaps = 2/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA IVG +L D ++ YREH + G + M ++ + + KG+ Sbjct: 78 FYMTCTGEEAAIVGSVAALDPEDVILAQYREHAALRYRGFTTEQFMNQMFSNEKDLGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H + + Q+ TG+ ++ K + + V FG+GAA++G + Sbjct: 138 QMPIHYGCAALNYQTISSPLATQIPQATGVGYSLKMQGKRNVAVCYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ VI+ NN YA+ T A + RGV + + ++VDG D+ AV A Sbjct: 198 LNMAAVLKCPVIFFCRNNGYAISTPTEEQFAGNGIASRGVGYGMHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A AY H P++IE +TYR HS S DP+ YR++EE + + HDP+++ + L+ Sbjct: 258 TQQARAYAIEHNAPVLIEAMTYRLGAHSSSDDPSGYRSKEEEAKWQ-QHDPVKRFKLWLI 316 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + W +E D + R+ + +V+ A+ P E+ D+ Sbjct: 317 NKGWLAEADDAQRYEKYREEVLAAVKVAEKLPIPMLDEIIEDV 359 >gi|148359092|ref|YP_001250299.1| pyruvate dehydrogenase E1 subunit alpha [Legionella pneumophila str. Corby] gi|296107140|ref|YP_003618840.1| pyruvate dehydrogenase E1 component, alpha subunit [Legionella pneumophila 2300/99 Alcoy] gi|148280865|gb|ABQ54953.1| pyruvate dehydrogenase E1 alpha subunit [Legionella pneumophila str. Corby] gi|295649041|gb|ADG24888.1| pyruvate dehydrogenase E1 component, alpha subunit [Legionella pneumophila 2300/99 Alcoy] Length = 357 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 86/315 (27%), Positives = 153/315 (48%), Gaps = 15/315 (4%) Query: 43 EVSEFNKEQEL--SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 E+ F Q + Y++M+L R F++KA L G +G + + GQEA+ + +L Sbjct: 24 ELPPFADNQSILKELYKIMVLTRTFDKKAIALQRTGKMGTYAPIN-GQEAISTAIGHALK 82 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D ++ YR++ GV S+I+A G + G + Sbjct: 83 PEDVLVPYYRDYAAQFQRGVKMSEILAFWGGDERGSHYSNNAEDLPICVP---------I 133 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 +Q G+AFA KYR ++ VVC G+G ++G YE+ N+A W L V++V+ NN++ Sbjct: 134 ASQCLHAAGVAFAFKYRNQPRVAVVCIGEGGTSEGDFYEAMNVAGAWKLPVVFVVNNNKW 193 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ + + + +++ ++ G+Q+DG DI A + + A+ R GP +IE L Sbjct: 194 AISVPIEKQTGSQTIAQKAIAAGFSGVQIDGNDIFAARQVIGDAIEKARQGGGPTLIEAL 253 Query: 281 TYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGDLKEIEMNVRK 338 TYR H+ +D A Y+ E+ E ++ +PI + + L+ N W S+ + K + K Sbjct: 254 TYRLCDHTTADDATRYQPSHEVEEAKAK-EPIVRFKHYLMQQNIWTSQDEEKLVIECSEK 312 Query: 339 IINNSVEFAQSDKEP 353 + E+ + +P Sbjct: 313 VEKAVEEYLNTKPQP 327 >gi|161830796|ref|YP_001596615.1| putative pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coxiella burnetii RSA 331] gi|164686068|ref|ZP_01946084.2| putative pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165918460|ref|ZP_02218546.1| putative pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coxiella burnetii RSA 334] gi|161762663|gb|ABX78305.1| putative pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coxiella burnetii RSA 331] gi|164601624|gb|EAX33280.2| putative pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165917828|gb|EDR36432.1| putative pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coxiella burnetii RSA 334] Length = 341 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 96/319 (30%), Positives = 162/319 (50%), Gaps = 6/319 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + ++N+ +EL Y+L L IR EE+ Y G + HL IGQEA+ + + +L D Sbjct: 1 MQDWNQYKEL-LYKL-LRIRMIEEEIVLQYPKGKMRCPTHLSIGQEAIPIMVCENLHNTD 58 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M++ +R H H LA G + ++AEL G+ G + G+GGSM++ GF IV Sbjct: 59 LMVSTHRAHAHYLAKGGNLKALIAELHGKVTGATAGRGGSMNLSDLSVGFVASTAIVANT 118 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V +G G+AF+ K ++S+ I + GD A +G VYES N A L L V++V ENN Y++ Sbjct: 119 VPIGVGLAFSQKLKKSNVITTIFLGDAAVEEGVVYESLNFAVLKRLPVLFVCENNLYSVN 178 Query: 224 TSVS-RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T + R A + +DG DI ++ + + R + G +E TY Sbjct: 179 TPLHLRQPANRAIHEMAKGIGAKTQNIDGNDIPTSFHSVCEVMKDLRENGGVWFLEFQTY 238 Query: 283 RYRGHSMSDPANY--RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 R++ H + + R++ E + + DP+ ++ +LL K S ++ + ++ I Sbjct: 239 RFKVHCGPEEETFTDRSKTEFDHWLAR-DPLSLLQSQLLTAKTVSPEEIDKWRHEIQNEI 297 Query: 341 NNSVEFAQSDKEPDPAELY 359 + + FA+S P P + + Sbjct: 298 DEAFTFAESSPYPPPEDRF 316 >gi|163752542|ref|ZP_02159727.1| alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Shewanella benthica KT99] gi|161327565|gb|EDP98764.1| alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Shewanella benthica KT99] Length = 393 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 85/294 (28%), Positives = 145/294 (49%), Gaps = 3/294 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y + R +E+ G + F C G+EA I+G +L +GD ++ YREH I Sbjct: 55 YDTCVFTRVLDERMLSAQRQGRIS-FYMTCTGEEASIIGSTAALDDGDVILAQYREHAAI 113 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 G + M +L + + KG+ +H S + + + Q+ TG+ ++ K Sbjct: 114 RYRGFTTEQFMNQLFSNEKDLGKGRQMPIHYGSAELNYQTISSPLATQIPQATGVGYSFK 173 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + I + FG+GAA++G + N+AA+ I+ NN YA+ T S Sbjct: 174 MQGKRNIAICYFGEGAASEGDFHAGLNMAAVLKSPTIFFCRNNGYAISTPTSEQFCGNGI 233 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + RG + I ++VDG D+ AV A +A AY + P++IE +TYR HS S DP+ Sbjct: 234 ASRGPGYGIHTIRVDGNDMLAVLAATQQARAYAVENHSPVLIEAMTYRLGAHSSSDDPSG 293 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 YR+++E + + HDP+++ + + + W +E E+ N RK I ++ A+ Sbjct: 294 YRSKDEEAKWQ-QHDPVKRFKLWMFNKGWLTEKQDAEMYENYRKEILAELKVAE 346 >gi|256833676|ref|YP_003162403.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Jonesia denitrificans DSM 20603] gi|256687207|gb|ACV10100.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Jonesia denitrificans DSM 20603] Length = 393 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 96/283 (33%), Positives = 145/283 (51%), Gaps = 12/283 (4%) Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 S YR M+++RRF+ +A L G + + L +GQEA VG +L D + +YREHG Sbjct: 51 SFYRDMMVVRRFDVEATALQRQGELALYAPL-LGQEAAQVGSGRALATTDMVFPSYREHG 109 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 G+D +KI+ G G + HM++ G + H VG + + A Sbjct: 110 VAHTRGLDMTKILQLFRGVNHGGWDSFERNFHMYTLVIGSHALHA-VGYAMGIQQDAKLA 168 Query: 174 N-------KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + + + +V FGDGA +QG V E+ AA+ N V++ +NNQ+A+ Sbjct: 169 QARGGQEAAAQAAPEAVMVYFGDGATSQGDVSEALGFAAVNNAPVVFFCQNNQWAISVP- 227 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + ++ RG F +PG++VDG D+ AV A A+ Y R GP+ IE +TYR Sbjct: 228 NHLQFKSPLYLRGTGFGVPGVRVDGNDVLAVHAATRWALDYARHGHGPVFIEAVTYRMGA 287 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 H+ S DP YRTREE + R+ DPI+++R+ L SE D Sbjct: 288 HTTSDDPTKYRTREEEAQWRAK-DPIDRIRRALEDEGVWSEAD 329 >gi|62317910|ref|YP_223763.1| dehydrogenase complex, E1 component, dehydrogenase [Brucella abortus bv. 1 str. 9-941] gi|62198103|gb|AAX76402.1| dehydrogenase complex, E1 component, dehydrogenase [Brucella abortus bv. 1 str. 9-941] Length = 651 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 84/225 (37%), Positives = 116/225 (51%), Gaps = 4/225 (1%) Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 ++MAE+ G G G+GGSMHM +G G IVG + G A A+K I Sbjct: 50 RLMAEIMGLNTGYCGGRGGSMHMRDAASGIAGTSAIVGGNIPHAAGYALADKILNRKGIS 109 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 V FGDGA+ QG YE+ NIAAL+ L VI+ +ENN YA+ T + A+ +T + RG Sbjct: 110 VAFFGDGASLQGATYEAMNIAALYRLPVIFYVENNLYAVSTHIQDATRETRIASRGPMLG 169 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN---YRTREE 300 G++ D MDI +V M +A GP++IE YRY S S + YRTREE Sbjct: 170 FTGIECDAMDILSVHQAMREACRIIEEEGGPVVIEAQCYRYLHQSGSKSGSDFGYRTREE 229 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 E +S DPI +RL A + + +I+ V + + E Sbjct: 230 EEEWKSR-DPIALAERRLKELGIAGDAEFLKIDERVTAAVQAAGE 273 >gi|282863885|ref|ZP_06272943.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sp. ACTE] gi|282561586|gb|EFB67130.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sp. ACTE] Length = 382 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 97/316 (30%), Positives = 149/316 (47%), Gaps = 25/316 (7%) Query: 16 ALNPSVSAKRAATSSVDCVDIPFL------EGFEVSEFNKEQELSA------YRLMLLIR 63 A P S+KR + + P L EG V + +LS YR M+L R Sbjct: 8 ARKPRRSSKRTSAAKTPQKSEPQLVQLLTPEGERVEHPDYTIDLSGDELRGLYRDMVLTR 67 Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 RF+ +A L G +G + L +GQEA +G +L + D + YREHG GVD + Sbjct: 68 RFDAEATALQRQGELGLWASL-LGQEAAQIGSGRALRDDDYVFPTYREHGVAWCRGVDPT 126 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 ++ G G + H+++ ++G+Q TG A +D Sbjct: 127 NLLGMFRGVNHGGWDPNSNNFHLYTI---------VIGSQTLHATGYAMGVAKDGADSAV 177 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + FGDGA++QG V ESF +A++N V++ +NNQ+A+ R + + +R + Sbjct: 178 IAYFGDGASSQGDVAESFTFSAVYNAPVVFFCQNNQWAISEPTERQT-RVPLYQRAQGYG 236 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEIN 302 PG++VDG D+ A A A+ R +GP ++E TYR H+ S DP YR EE Sbjct: 237 FPGVRVDGNDVLACLAVTRSALERARRGEGPTLVEAFTYRMGAHTTSDDPTKYRADEERA 296 Query: 303 EMRSNHDPIEQVRKRL 318 + DPI ++R L Sbjct: 297 AWEA-RDPILRLRTYL 311 >gi|167584828|ref|ZP_02377216.1| probable pyruvate dehydrogenase e1 component (alpha subunit) oxidoreductase protein [Burkholderia ubonensis Bu] Length = 362 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 91/286 (31%), Positives = 145/286 (50%), Gaps = 19/286 (6%) Query: 44 VSEFNKEQE--LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 + EF ++ L YR M+L R F+ KA L G +G F +GQEA+ VG+ ++ Sbjct: 25 LPEFAQDPAALLPLYRAMVLTRAFDAKAVALQRTGKLGTFAS-SVGQEAIGVGVASAMQT 83 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK--GGSMHMFSTKNGFYGGHGI 159 D + +YR+H L GV MAE GG +G G + H F Sbjct: 84 DDVLFPSYRDHAAQLLRGV----TMAESLLYWGGDERGSDFGAARHDFPNCVP------- 132 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 +G QV G A+A RR ++ V FGDG ++G YE+ N+A W ++ VI +NQ Sbjct: 133 IGTQVCHAAGAAYAFMLRREPRVAVTIFGDGGTSKGDFYEAMNMAGAWQAPLVLVINDNQ 192 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+ +R +A +++ ++ I G QVDG D+ AV+ + +A+ R GP ++E Sbjct: 193 WAISVPRTRQTAAQTLAQKAIAAGIEGRQVDGNDVIAVRQVVSEALDKARRGGGPTLVEA 252 Query: 280 LTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLH-NKW 323 L+YR H+ +D A YR + + + + H+P+ ++R L N W Sbjct: 253 LSYRLGDHTTADDATRYRDADTVAK-QWEHEPLIRLRTYLTRMNAW 297 >gi|56807441|ref|ZP_00365399.1| COG1071: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Streptococcus pyogenes M49 591] Length = 204 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 76/196 (38%), Positives = 112/196 (57%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E+ +KEQ L + M IR F+ + +L G V G H +G+EA VG L+ Sbjct: 4 EMVTVSKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLSYD 63 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HG +A +D +K+MAEL G+ G SKG+GGSMH+ + G YG +GIVG Sbjct: 64 DIIFSNHRGHGQSIAKDMDLNKMMAELAGKATGASKGRGGSMHLADFEKGNYGTNGIVGG 123 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 +L G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 124 GYALAVGAALTQQYKGTNNIAVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGI 183 Query: 223 GTSVSRASAQTNFSKR 238 S++ A+ + R Sbjct: 184 SMSINNATNTPHLYTR 199 >gi|301066493|ref|YP_003788516.1| acetoin dehydrogenase complex, E1 component subunit alpha [Lactobacillus casei str. Zhang] gi|300438900|gb|ADK18666.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Lactobacillus casei str. Zhang] Length = 334 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 91/322 (28%), Positives = 157/322 (48%), Gaps = 9/322 (2%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT- 100 E + ++E L Y+ ++ RR +E+ L+ + +G F GQ A + M+L Sbjct: 10 LETTGLSRETILDVYKAVMRGRRVDER---LWQLTRIGKFSFNISGQGAEVGQAAMALAF 66 Query: 101 --EGDQMITAYREHGHILACGVDASKIMAELTGRQGG-ISKGKGGSMHMFSTKNGFYGGH 157 + D + YR+ +L G+ IM G++ S G+ H S + Sbjct: 67 DYDKDYFLPYYRDLTAVLMWGMTTKDIMLAGFGKEADPASHGRQMPSHYGSKAHNIVSHS 126 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 V Q + GIA+ + R D + VV GDG+ +QG+ E+ NIA + + V++V+EN Sbjct: 127 SPVSTQYPISAGIAYGAQMRGEDYVTVVTTGDGSFSQGECAEAMNIAGVHKMPVVFVVEN 186 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N YA+ A + RG +F G++V+G D +AV R GP +I Sbjct: 187 NGYAISVPDKEQYAVEKLADRGPAFGFKGIRVNGSDFAETYLAFKQAVTDARQGNGPTLI 246 Query: 278 EMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E++ R HS D YR+ EE+ E++ N DP++ +++L+ + +E D+ IE + Sbjct: 247 EIMVERLTSHSSDDDQRVYRSAEELAEIKEN-DPVKLFQQQLIDEGYLNEADIDRIEKEL 305 Query: 337 RKIINNSVEFAQSDKEPDPAEL 358 IN + + A++ +PDPA++ Sbjct: 306 ETEINQATDEAEAMPDPDPAKI 327 >gi|148264939|ref|YP_001231645.1| pyruvate dehydrogenase (acetyl-transferring) [Geobacter uraniireducens Rf4] gi|146398439|gb|ABQ27072.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacter uraniireducens Rf4] Length = 351 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 89/305 (29%), Positives = 150/305 (49%), Gaps = 12/305 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y LM+L R F+E+A L G +G + + +GQEA VG +L D +I ++RE Sbjct: 40 YELMVLARTFDERALALQREGRLGTYPPI-MGQEAAQVGSAFALHPTDWVIPSFREMAVH 98 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 G ++ G + G ++ VG + G+A A K Sbjct: 99 FTLGYPIHLMLQYWGGDERGQRTPDNLNILPICVS---------VGTHIPHAVGVAMAAK 149 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 YRR V FGDGA ++G+ +E FN+A L+ L V+++ +NNQ+A+ V +A Sbjct: 150 YRRDPVAVVAYFGDGATSKGEFHEGFNMAGLFRLPVVFICQNNQWAISIPVQGQTASATL 209 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 +++ ++ G+QVDG D+ AV +A+ R+ GP IE LTYR H+ SD A+ Sbjct: 210 AQKAFAYGFEGVQVDGNDVFAVYRAASEALDKARSGGGPTFIECLTYRMADHTTSDDASR 269 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR+ EE+ R DPI ++ + + S+ ++++ I+ +V ++ P Sbjct: 270 YRSPEEVASWRGK-DPILRLERFMASRGLMSDEYARDVKQRAADTIDEAVRAEEAAPPPT 328 Query: 355 PAELY 359 A+++ Sbjct: 329 AADMF 333 >gi|254827632|ref|ZP_05232319.1| 2-oxoisovalerate dehydrogenase E1 component [Listeria monocytogenes FSL N3-165] gi|258600011|gb|EEW13336.1| 2-oxoisovalerate dehydrogenase E1 component [Listeria monocytogenes FSL N3-165] Length = 331 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 151/309 (48%), Gaps = 7/309 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGH 114 Y ML+ RR +E+ L G + F GQE +G + + D + YR+ Sbjct: 17 YETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYALPYYRDLAV 75 Query: 115 ILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +LA G+ A IM + + S G+ H +N V Q GI A Sbjct: 76 VLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKENRIVTQSSPVTTQFPHAAGIGLA 135 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K + G+G++NQG +E N A++ L V++VI NNQYA+ S+ A Sbjct: 136 AKMAGDEIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQYAISVPASKQYAAE 195 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-SMSDP 292 S R + + IPG +VDG ++ V A +A R +GP +IE ++YR+ H S D Sbjct: 196 KLSDRAIGYGIPGERVDGTNMGEVYAAFKRAADRARNGEGPTLIETVSYRFTPHSSDDDD 255 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD-- 350 ++YR+REE+NE + DP+ + LL + +E + EIE N+ K +N + ++A+S Sbjct: 256 SSYRSREEVNEAKGK-DPLTIFQTELLEEGYLTEEKIAEIEKNIAKEVNEATDYAESAAY 314 Query: 351 KEPDPAELY 359 EP+ + LY Sbjct: 315 AEPESSLLY 323 >gi|253699124|ref|YP_003020313.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacter sp. M21] gi|251773974|gb|ACT16555.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacter sp. M21] Length = 351 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 88/305 (28%), Positives = 153/305 (50%), Gaps = 20/305 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + +Q Y+LM+L R F+E+A L G +G + + GQEA VG +L D Sbjct: 28 MPELSADQIRRMYQLMVLSRCFDERAVSLQREGRLGTYPPI-RGQEAAQVGSAFALQPND 86 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + ++RE G L G +++ TG + ++ F VG+Q Sbjct: 87 WVFPSFREMGAHLTLGYPIPQLLQYWTGDERAQKAPPQLNIFPFCVA---------VGSQ 137 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G A A +YRR V FGDGA ++G +E+ N+A ++ L ++++ +NNQ+A+ Sbjct: 138 IPHAVGAALAARYRRDSAAVAVYFGDGATSKGDFHEAMNMAGVYQLPIVFICQNNQWAIS 197 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + +A + +++ +++ G+QVDG D+ AV +A+ R+ GP +E LTYR Sbjct: 198 VPLKGQTASASLAQKALAYGFEGVQVDGNDVLAVYRATKQALEKARSGGGPTFLECLTYR 257 Query: 284 YRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLL--------HNKWASEGDLKEIEM 334 H+ +D A YR+ EE+ + + DPI ++ + L +WA E I+ Sbjct: 258 MADHTTADDAGRYRSDEEV-ALWNGRDPILRLERFLAASGAWTPEQGRWAKEEATALIDR 316 Query: 335 NVRKI 339 VR++ Sbjct: 317 GVREM 321 >gi|54297470|ref|YP_123839.1| hypothetical protein lpp1515 [Legionella pneumophila str. Paris] gi|53751255|emb|CAH12666.1| hypothetical protein lpp1515 [Legionella pneumophila str. Paris] Length = 357 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 88/317 (27%), Positives = 157/317 (49%), Gaps = 17/317 (5%) Query: 43 EVSEFNKEQEL--SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 E+ F Q + Y++M+L R F++KA L G +G + + GQEA+ + +L Sbjct: 24 ELPPFADNQSILKELYKIMVLTRTFDKKAIALQRTGKMGTYAPIN-GQEAISTAIGHALK 82 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D ++ YR++ GV S+I+A G + G + Sbjct: 83 PEDVLVPYYRDYAAQFQRGVKMSEILAFWGGDERGSHYSNNAEDLPICVP---------I 133 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 +Q G+AFA KYR ++ VVC G+G ++G YE+ N+A W L V++V+ NN++ Sbjct: 134 ASQCLHAAGVAFAFKYRNQPRVAVVCIGEGGTSEGDFYEAMNVAGAWKLPVVFVVNNNKW 193 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ + + + +++ ++ G+Q+DG DI A + + A+ R GP +IE L Sbjct: 194 AISVPIEKQTGSQTIAQKAIAAGFSGVQIDGNDIFAARQVIGDAIEKARQGGGPTLIEAL 253 Query: 281 TYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGDLKEIEMNVRK 338 TYR H+ +D A Y+ E+ E ++ +PI + + L+ N W S+ D +++ + + Sbjct: 254 TYRLCDHTTADDATRYQPSHEVEEAKAK-EPIVRFKHYLMQQNIWTSQ-DEEKLVIECSE 311 Query: 339 IINNSVEFAQSDKEPDP 355 + +VE + K P P Sbjct: 312 TVEKAVEEYLNTK-PQP 327 >gi|329935726|ref|ZP_08285531.1| E1-alpha branched-chain alpha keto acid dehydrogenase system [Streptomyces griseoaurantiacus M045] gi|329304817|gb|EGG48690.1| E1-alpha branched-chain alpha keto acid dehydrogenase system [Streptomyces griseoaurantiacus M045] Length = 459 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 90/312 (28%), Positives = 146/312 (46%), Gaps = 13/312 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ E YR M+L RRF+ +A L G +G + L +GQEA +G + D Sbjct: 123 VADLTPEDLRGLYRDMVLTRRFDAEATSLQRQGELGLWASL-LGQEAAQIGSGRATRPDD 181 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YREHG GVD + ++ G G + H+++ ++G+Q Sbjct: 182 YVFPTYREHGVAWCRGVDPTNLLGMFRGVNNGGWDPNSNNFHLYTI---------VIGSQ 232 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A +D + FGDGA++QG V ESF +A++N V++ +NNQ+A+ Sbjct: 233 ALHATGYAMGVAKDGADAAVIAYFGDGASSQGDVAESFTFSAVYNAPVVFFCQNNQWAIS 292 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + + + +R + PG++VDG D+ A A A+ R +GP ++E TYR Sbjct: 293 EPTEKQT-RVPLYQRAQGYGFPGVRVDGNDVLACLAVTKWALERARRGEGPTLVEAFTYR 351 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ S DP+ YR +E + DPI ++R L E E+E + Sbjct: 352 MGAHTTSDDPSRYRHDDERVAWEAK-DPIARLRAHLTAANHTDESFFAELEAESEALGRR 410 Query: 343 SVEFAQSDKEPD 354 E ++ +PD Sbjct: 411 VREAVRAMPDPD 422 >gi|311069005|ref|YP_003973928.1| branched-chain alpha-keto acid dehydrogenase E1 subunit [Bacillus atrophaeus 1942] gi|310869522|gb|ADP32997.1| branched-chain alpha-keto acid dehydrogenase E1 subunit [Bacillus atrophaeus 1942] Length = 330 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 94/305 (30%), Positives = 149/305 (48%), Gaps = 5/305 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + + + YR MLL R+ +E+ L G + F C GQEA VG +L + D + Sbjct: 11 LSDNEAIDIYRTMLLARKIDERMWLLNRSGKIP-FVISCQGQEAAQVGAAFALDRDNDYI 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR+ G +L G+ A+ +M ++ S G+ H KN G V QV Sbjct: 70 LPYYRDLGVVLTFGMTATDLMMSGFAKEADPNSAGRQMPGHFGQKKNRIVTGSSPVTTQV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 GIA A + + D V FG+G++NQG +E N AA+ L VI++ ENN+YA+ Sbjct: 130 PHAVGIALAGRMEKKDITAFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAISV 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++ A S R + + +PG+ VDG D V + +A R +GP +IE ++ R Sbjct: 190 PYNKQVACEKISDRAIGYGMPGVTVDGNDPLTVYQAVKEARERARRGEGPTLIETVSDRL 249 Query: 285 RGHSM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D +YRT+EE+ E R N DP+ + L +E ++ + I+N + Sbjct: 250 TPHSSDDDDMSYRTKEEVTEARKN-DPLLNYQAYLQETGLLTEEMETKMLEEIMTIVNQA 308 Query: 344 VEFAQ 348 + A+ Sbjct: 309 TDEAE 313 >gi|294140813|ref|YP_003556791.1| alpha keto acid dehydrogenase complex, E1 component subunit alpha [Shewanella violacea DSS12] gi|293327282|dbj|BAJ02013.1| alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Shewanella violacea DSS12] Length = 414 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 137/269 (50%), Gaps = 2/269 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA I+G SL +GD ++ YREH I G + M +L + + KG+ Sbjct: 100 FYMTCTGEEASIIGSTASLDDGDVILAQYREHAAIRYRGFTTEQFMNQLFSNEKDLGKGR 159 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + + + Q+ TG+ ++ K + I + FG+GAA++G + Sbjct: 160 QMPIHYGSAELNYQTISSPLATQIPQATGVGYSFKMQGKRNIAICYFGEGAASEGDFHAG 219 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ I+ NN YA+ T S + RG + I ++VDG D+ AV A Sbjct: 220 LNMAAVLKSPTIFFCRNNGYAISTPTSEQYCGNGIASRGPGYGIHTIRVDGNDMLAVLAA 279 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A AY + P++IE +TYR HS S DP+ YR+++E + + HDP+++ + ++ Sbjct: 280 TQQARAYAVENHSPVLIEAMTYRLGAHSSSDDPSGYRSKDEEAKWQ-QHDPVKRFKLWMI 338 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 + W +E E+ RK I ++ A+ Sbjct: 339 NKGWLTESQDAEMYERYRKEILAELKVAE 367 >gi|91215769|ref|ZP_01252739.1| pyruvate dehydrogenase beta subunit [Psychroflexus torquis ATCC 700755] gi|91186235|gb|EAS72608.1| pyruvate dehydrogenase beta subunit [Psychroflexus torquis ATCC 700755] Length = 669 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 81/312 (25%), Positives = 158/312 (50%), Gaps = 4/312 (1%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 F+ +E + YR +L R EEK L G + + IGQEA+ +G+ +L + Sbjct: 14 FKHQSLTRENHIDLYRSLLKPRLIEEKMLILLRQGKISKWFS-GIGQEAIAIGVTKALNK 72 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 + ++ +R G G+ ++ ++ G+ G +KG+ S H + + G +G Sbjct: 73 EEYILPMHRNLGVFTERGIPLYRLFSQFQGKSNGFTKGRDRSFHFGTQEYKIIGMISHLG 132 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ + GIA A+K + + V G+G ++G +E+ NIA++W L V++ +ENN Y Sbjct: 133 PQLGVADGIALAHKLKNEKAVTAVFTGEGGTSEGDFHEALNIASVWQLPVLFCVENNGYG 192 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T VS + + +G + + ++G +I V M + V R + P++IE T Sbjct: 193 LSTPVSEQFNCEHIADKGKGYGMESHIIEGNNIVEVFTKMKEIVEEVRENPRPVLIEFKT 252 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 +R RGH + Y EE+ + + DP+E + LL + + ++ ++ + + +++ IN Sbjct: 253 FRMRGHEEASGTKY-VPEELMDYWAKQDPVENYEQFLLDSDFITKDEVSKFKSDIKSEIN 311 Query: 342 NSVEFAQSDKEP 353 ++ +++KEP Sbjct: 312 EHLK--RTNKEP 321 >gi|52841788|ref|YP_095587.1| pyruvate dehydrogenase E1 alpha subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628899|gb|AAU27640.1| pyruvate dehydrogenase E1 alpha subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 364 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 88/317 (27%), Positives = 157/317 (49%), Gaps = 17/317 (5%) Query: 43 EVSEFNKEQEL--SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 E+ F Q + Y++M+L R F++KA L G +G + + GQEA+ + +L Sbjct: 31 ELPPFADNQSILKELYKIMVLTRTFDKKAIALQRTGKMGTYAPIN-GQEAISTAIGHALK 89 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D ++ YR++ GV S+I+A G + G + Sbjct: 90 PEDVLVPYYRDYAAQFQRGVKMSEILAFWGGDERGSHYSNNAEDLPICVP---------I 140 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 +Q G+AFA KYR ++ VVC G+G ++G YE+ N+A W L V++V+ NN++ Sbjct: 141 ASQCLHAAGVAFAFKYRNQPRVAVVCIGEGGTSEGDFYEAMNVAGAWKLPVVFVVNNNKW 200 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ + + + +++ ++ G+Q+DG DI A + + A+ R GP +IE L Sbjct: 201 AISVPIEKQTGSQTIAQKAIAAGFSGVQIDGNDIFAARQVIGDAIEKARQGGGPTLIEAL 260 Query: 281 TYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGDLKEIEMNVRK 338 TYR H+ +D A Y+ E+ E ++ +PI + + L+ N W S+ D +++ + + Sbjct: 261 TYRLCDHTTADDATRYQPSHEVEEAKAK-EPIVRFKHYLMQQNIWTSQ-DEEKLVIECSE 318 Query: 339 IINNSVEFAQSDKEPDP 355 + +VE + K P P Sbjct: 319 TVEKAVEEYLNTK-PQP 334 >gi|218233774|ref|YP_002368965.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus B4264] gi|218899326|ref|YP_002447737.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus G9842] gi|228902676|ref|ZP_04066824.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis IBL 4222] gi|228941324|ref|ZP_04103877.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228954448|ref|ZP_04116473.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960430|ref|ZP_04122082.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar pakistani str. T13001] gi|228967204|ref|ZP_04128240.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar sotto str. T04001] gi|228974256|ref|ZP_04134826.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980847|ref|ZP_04141152.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis Bt407] gi|229019375|ref|ZP_04176199.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus AH1273] gi|229025621|ref|ZP_04182028.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus AH1272] gi|229031810|ref|ZP_04187798.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus AH1271] gi|229047858|ref|ZP_04193435.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus AH676] gi|229071669|ref|ZP_04204886.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus F65185] gi|229081421|ref|ZP_04213922.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock4-2] gi|229111636|ref|ZP_04241187.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock1-15] gi|229129442|ref|ZP_04258413.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus BDRD-Cer4] gi|229146736|ref|ZP_04275102.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus BDRD-ST24] gi|229152364|ref|ZP_04280556.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus m1550] gi|229163097|ref|ZP_04291053.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus R309803] gi|229180442|ref|ZP_04307785.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus 172560W] gi|229192374|ref|ZP_04319338.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus ATCC 10876] gi|296504652|ref|YP_003666352.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis BMB171] gi|218161731|gb|ACK61723.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus B4264] gi|218543557|gb|ACK95951.1| 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit [Bacillus cereus G9842] gi|228591154|gb|EEK49009.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus ATCC 10876] gi|228603189|gb|EEK60667.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus 172560W] gi|228620503|gb|EEK77373.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus R309803] gi|228630972|gb|EEK87609.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus m1550] gi|228636756|gb|EEK93220.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus BDRD-ST24] gi|228654047|gb|EEL09914.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus BDRD-Cer4] gi|228672018|gb|EEL27311.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock1-15] gi|228701883|gb|EEL54368.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock4-2] gi|228711464|gb|EEL63422.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus F65185] gi|228723488|gb|EEL74856.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus AH676] gi|228729428|gb|EEL80417.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus AH1271] gi|228735715|gb|EEL86303.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus AH1272] gi|228741943|gb|EEL92119.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus AH1273] gi|228779016|gb|EEM27278.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis Bt407] gi|228785596|gb|EEM33605.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792573|gb|EEM40139.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar sotto str. T04001] gi|228799291|gb|EEM46256.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar pakistani str. T13001] gi|228805105|gb|EEM51699.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228818483|gb|EEM64555.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228856961|gb|EEN01473.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis IBL 4222] gi|296325704|gb|ADH08632.1| 2-oxoisovalerate dehydrogenase alpha subunit [Bacillus thuringiensis BMB171] gi|326941942|gb|AEA17838.1| 2-oxoisovalerate dehydrogenase alpha subunit [Bacillus thuringiensis serovar chinensis CT-43] Length = 333 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 146/306 (47%), Gaps = 5/306 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ L +R MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 14 LSDEQVLEMFRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYA 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A ++M + G + G G M H KN G V Q Sbjct: 73 LPYYRDMGVVLAFGMTAKELMLSAFAKAGDPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQ 131 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 132 VPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 191 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + A N S R + + +PG +DG D AV + +A R +GP +IE ++YR Sbjct: 192 IPVEKQLACKNVSDRAIGYGMPGYTIDGNDPLAVYKAVKEAADRGRRGEGPTLIETVSYR 251 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D +E E D I L +E K++ + I+N + Sbjct: 252 LTAHSSDDDDRVYRDKEEVEEAKKKDSIITFAAYLKEAGVLTEESEKQMLDEIMHIVNEA 311 Query: 344 VEFAQS 349 E+A++ Sbjct: 312 TEYAEN 317 >gi|302531225|ref|ZP_07283567.1| pyruvate dehydrogenase E1 component alpha subunit [Streptomyces sp. AA4] gi|302440120|gb|EFL11936.1| pyruvate dehydrogenase E1 component alpha subunit [Streptomyces sp. AA4] Length = 401 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 95/325 (29%), Positives = 155/325 (47%), Gaps = 18/325 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + E + YR M+L+RR + +A + G +G + L +GQEA VG +L D Sbjct: 61 VEDVDDETLKNLYRDMVLVRRADREANAMQRQGQLGIWVPL-LGQEAAQVGSGRALQPRD 119 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +YREHG GVD +++ GI + S + F+ ++G Q Sbjct: 120 MAFPSYREHGVAYTRGVDMRELI--------GIFRCTDHSGWDYQAHR-FHPYTIVIGNQ 170 Query: 164 VSLGTGIAFANKYR-----RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 V G A K+ + + FGDGA +QG V+E F AA+++ +++ +NN Sbjct: 171 VLNAAGYAMGQKFEGKVGDEGGEATICYFGDGATSQGDVHEGFVWAAVYDAPLVFFCQNN 230 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 Q+A+ R S + +R + PG++VDG D+ A A A+ CR GP++IE Sbjct: 231 QWAISEPTERQS-RLPLYQRARGYGFPGIRVDGNDVLACLAVTRWALDECRHGNGPVLIE 289 Query: 279 MLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 TYR H+ + DP YR +E+ E + DPIE+VR L N A + ++ Sbjct: 290 AFTYRMDAHTTTDDPTRYRLSDELEEWKLK-DPIERVRAFLARNGHADQAFFDSVQAEAD 348 Query: 338 KIINNSVEFAQSDKEPDPAELYSDI 362 + ++ + EP P ++S + Sbjct: 349 QFAAELRDYTFNMPEPPPDRVFSQV 373 >gi|257057823|ref|YP_003135655.1| pyruvate dehydrogenase E1 component, alpha subunit [Saccharomonospora viridis DSM 43017] gi|256587695|gb|ACU98828.1| pyruvate dehydrogenase E1 component, alpha subunit [Saccharomonospora viridis DSM 43017] Length = 376 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 96/326 (29%), Positives = 156/326 (47%), Gaps = 19/326 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ + E YR M+L+RR + + + G +G + L +GQEA +G +L D Sbjct: 35 VADIDAEALRGLYRDMVLVRRGDRECNAMQRQGQLGIWVPL-LGQEAAQIGSGRALKPQD 93 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +YREHG GV ++++ GI + S F + F+ ++G Q Sbjct: 94 MAFPSYREHGVAYTRGVSFTELL--------GIFRCTDHSGWDFRRRR-FHPYTIVIGNQ 144 Query: 164 VSLGTGIAFANKYRR-----SDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 V TG A K+ D +C FGDGA +QG V+E F A++++ V++ +N Sbjct: 145 VLNATGYAMGQKFEGKVGDGPDAEATICYFGDGATSQGDVHEGFVWASVYDAPVVFFCQN 204 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 NQ+A+ R + + +R + PG++VDG D+ A A A+ CR GP++I Sbjct: 205 NQWAISEPTERQT-RLPLYQRARGYGFPGIRVDGNDVLACLAVTRWALEECRRGNGPVLI 263 Query: 278 EMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E TYR H+ + DP YR +E+ E DPIE+VR L A + E+E Sbjct: 264 EAFTYRMDAHTTTDDPTRYRLADEV-EAWKLKDPIERVRVHLTRTGNADQAFFDEVEAEA 322 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDI 362 + +F + +P P ++S + Sbjct: 323 DRFAAELRDFCFNMPDPPPERVFSAV 348 >gi|92118577|ref|YP_578306.1| pyruvate dehydrogenase (lipoamide) [Nitrobacter hamburgensis X14] gi|91801471|gb|ABE63846.1| Pyruvate dehydrogenase (lipoamide) [Nitrobacter hamburgensis X14] Length = 363 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 91/273 (33%), Positives = 149/273 (54%), Gaps = 13/273 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 +S YR M+L+R F+ KA L G +G + + +GQEAV VG+ ++ + D ++ +YR++ Sbjct: 45 VSLYRAMVLVRAFDLKAVALQRTGRLGTYA-VSLGQEAVAVGVASAMRDEDVLLPSYRDN 103 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 ++ GV +I+ G + G G +H F VG+Q G+A+ Sbjct: 104 AAMIWRGVKLEEILLFWGGDERG--NHSSGPVHDFPCCVP-------VGSQAPHAAGVAY 154 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K RR ++ V FGDGA ++G V+E+ N A + L V++VI NNQ+A+ + +A Sbjct: 155 AFKLRREPRVAVCLFGDGATSKGDVFEAMNFAGVHKLPVVFVITNNQWAISVPLRLQTAS 214 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-D 291 +++ ++ G QVDG D A+ A +A+A R +GP +IE +TYR H+ + D Sbjct: 215 ETLAQKAIAAGFIGEQVDGNDAVAMHAAATEAIAAARDGRGPRLIEAVTYRLGDHTTADD 274 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLL-HNKW 323 A YR EE+ + R +PI ++R L+ N W Sbjct: 275 AARYRPPEEV-QARWKDEPIGRLRAYLVGRNAW 306 >gi|16803412|ref|NP_464897.1| hypothetical protein lmo1372 [Listeria monocytogenes EGD-e] gi|47095955|ref|ZP_00233558.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Listeria monocytogenes str. 1/2a F6854] gi|224499948|ref|ZP_03668297.1| hypothetical protein LmonF1_09844 [Listeria monocytogenes Finland 1988] gi|224501685|ref|ZP_03669992.1| hypothetical protein LmonFR_04082 [Listeria monocytogenes FSL R2-561] gi|254829871|ref|ZP_05234526.1| hypothetical protein Lmon1_00880 [Listeria monocytogenes 10403S] gi|254898463|ref|ZP_05258387.1| hypothetical protein LmonJ_01570 [Listeria monocytogenes J0161] gi|254912046|ref|ZP_05262058.1| 2-oxoisovalerate dehydrogenase E1 [Listeria monocytogenes J2818] gi|254936373|ref|ZP_05268070.1| 2-oxoisovalerate dehydrogenase E1 component [Listeria monocytogenes F6900] gi|284801757|ref|YP_003413622.1| hypothetical protein LM5578_1512 [Listeria monocytogenes 08-5578] gi|284994899|ref|YP_003416667.1| hypothetical protein LM5923_1464 [Listeria monocytogenes 08-5923] gi|16410788|emb|CAC99450.1| lmo1372 [Listeria monocytogenes EGD-e] gi|47015701|gb|EAL06631.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Listeria monocytogenes str. 1/2a F6854] gi|258608964|gb|EEW21572.1| 2-oxoisovalerate dehydrogenase E1 component [Listeria monocytogenes F6900] gi|284057319|gb|ADB68260.1| hypothetical protein LM5578_1512 [Listeria monocytogenes 08-5578] gi|284060366|gb|ADB71305.1| hypothetical protein LM5923_1464 [Listeria monocytogenes 08-5923] gi|293590012|gb|EFF98346.1| 2-oxoisovalerate dehydrogenase E1 [Listeria monocytogenes J2818] Length = 331 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 150/309 (48%), Gaps = 7/309 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGH 114 Y ML+ RR +E+ L G + F GQE +G + + D + YR+ Sbjct: 17 YETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYALPYYRDLAV 75 Query: 115 ILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +LA G+ A IM + + S G+ H N V Q GI A Sbjct: 76 VLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLA 135 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K + G+G++NQG +E N A++ L V++VI NNQYA+ S+ A Sbjct: 136 AKMAGDEIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQYAISVPASKQYAAE 195 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-SMSDP 292 S R + + IPG +VDG ++ V A +A R +GP +IE ++YR+ H S D Sbjct: 196 KLSDRAIGYGIPGERVDGTNMGEVYAAFKRAADRARNGEGPTLIETVSYRFTPHSSDDDD 255 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD-- 350 ++YR+REE+NE + DP+ + LL + +E + EIE N+ K +N + ++A+S Sbjct: 256 SSYRSREEVNEAKGK-DPLTIFQTELLEEGYLTEEKIAEIEKNIAKEVNEATDYAESAAY 314 Query: 351 KEPDPAELY 359 EP+ + LY Sbjct: 315 AEPESSLLY 323 >gi|212638803|ref|YP_002315323.1| branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase subunit alpha) [Anoxybacillus flavithermus WK1] gi|212560283|gb|ACJ33338.1| Branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit) [Anoxybacillus flavithermus WK1] Length = 330 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 145/305 (47%), Gaps = 5/305 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 + E L Y M+L R+ +E+ L G + F C GQEA VG +L D + Sbjct: 9 LSDETVLQMYETMVLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDRTKDYV 67 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR+ G +L G+ +++M + + S G+ H KN G V QV Sbjct: 68 LPYYRDMGVVLTFGMTPTELMLSAFAKAEDPNSGGRQMPGHFGKKKNRIVTGSSPVTTQV 127 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 128 PHAVGIALAAKMEKKDFVSFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAISV 187 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + A S R + + +PG VDG D V + +A R +GP +IE + YR Sbjct: 188 PIEKQLACEKVSDRAIGYGMPGYTVDGTDPLEVYRVVKEAADRARRGEGPTLIETVAYRL 247 Query: 285 RGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D YRT EEI E +S DPI L ++ KEI V K +N + Sbjct: 248 TAHSSDDDDRAYRTPEEIAEAKSK-DPIYLFANYLKEVGVLTDELEKEILDRVMKQVNEA 306 Query: 344 VEFAQ 348 ++A+ Sbjct: 307 TDYAE 311 >gi|311897359|dbj|BAJ29767.1| putative branched-chain alpha keto acid dehydrogenase E1 component alpha subunit [Kitasatospora setae KM-6054] Length = 395 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 92/314 (29%), Positives = 146/314 (46%), Gaps = 24/314 (7%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR ++ RR+ ++A L G + + GQEA V ++L D + +YR+ + Sbjct: 63 YRRLVAGRRYNQQATTLTKQGRLAVYP-ASTGQEACQVAAALALRPADWLFPSYRDTLAV 121 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A GVD + + L G + T + QV G+A A + Sbjct: 122 VARGVDPLQALTLLRGDAHTGYDPRATRTAPLCTP---------LATQVPHAVGLAHAAR 172 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 D + + GDG ++G +E N AA+ + V+++++NN YA+ ++R SA Sbjct: 173 LAGDDTVALALLGDGGTSEGDFHEGLNFAAVLHAPVVFLVQNNGYAISVPLTRQSAAPTL 232 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 + + V + +PG VDG D AV A + +AV RA GP ++E LTYR H+ +D A Sbjct: 233 AHKAVGYGVPGRLVDGNDAAAVHAVLTEAVERARAGGGPTLVEALTYRIEAHTNADDATR 292 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE------IEMNVRKIINNSVEFAQ 348 YR EE++ R+ HDP+ RLL + G L E E R EF Sbjct: 293 YRQPEEVDAWRA-HDPV-----RLLEDALRERGLLDERLVADAAEQAERLAARMRAEF-H 345 Query: 349 SDKEPDPAELYSDI 362 +D PDP L++ + Sbjct: 346 TDPAPDPMSLFAHV 359 >gi|217970380|ref|YP_002355614.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Thauera sp. MZ1T] gi|217507707|gb|ACK54718.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thauera sp. MZ1T] Length = 367 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 95/318 (29%), Positives = 154/318 (48%), Gaps = 14/318 (4%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + Q + YR M L R F+ KA L G +G F +GQEA+ VG+ ++ D + Sbjct: 31 DPAQLVPMYRAMYLTRTFDAKAIALQRTGKLGTFAS-ALGQEAIGVGVASAMRAEDALFP 89 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YREH L GV + E GG +G F+ + +G QV Sbjct: 90 SYREHAAQLVRGVR----IEESLRYWGGDERGSD-----FAQARHDFPNCVPIGTQVCHA 140 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A+A K R + V GDG +++G YE N AA+WN ++ V+ NNQ+A+ S Sbjct: 141 AGAAYAFKLRGEARAAVCFLGDGGSSKGDFYEGLNFAAVWNAPLLIVVSNNQWAISVPRS 200 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 SA +++ ++ + G+QVDG D+ AV +A+A RA GP +IE +TYR H Sbjct: 201 AQSATATLAQKAIAAGVEGVQVDGNDLVAVHHVAREALAKARAGGGPTLIEAITYRLGDH 260 Query: 288 SMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNVRKIINNSVE 345 + +D A+ YR + E S +P+ ++R L+ W + + + + + +N +VE Sbjct: 261 TTADDASRYRDPAVVQEQWS-FEPLTRLRNHLVGLGAWGPDKE-EALARECTETVNTAVE 318 Query: 346 FAQSDKEPDPAELYSDIL 363 + P A ++ + Sbjct: 319 AYLNTPPPTTAAMFEHLF 336 >gi|311030999|ref|ZP_07709089.1| branched-chain alpha-keto acid dehydrogenase E1 [Bacillus sp. m3-13] Length = 330 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 147/308 (47%), Gaps = 9/308 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 E L + MLL RR +E+ L G + F C GQEA VG +L E D + Sbjct: 11 LTDENVLEMFETMLLARRIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYV 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGA 162 + YR+ G +L G+ A+++M L+G GG H KN G V Sbjct: 70 LPYYRDMGVVLTFGMTATELM--LSGFAKAEDPNSGGRQMPGHFGQKKNRIVTGSSPVTT 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV G+A + D V FG+G++NQG +E N AA+ L VI++ ENN+YA+ Sbjct: 128 QVPHAVGVALGGRLEGKDLCTFVTFGEGSSNQGDFHEGANYAAVHKLPVIFMCENNKYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A S R + + +PG+ +DG D V A + +A R +GP ++E ++Y Sbjct: 188 SVPYEKQVACEKISDRALGYGMPGITIDGNDPLEVYAAVKEAADRGRRGEGPTLVEAISY 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D YR R+E+ ++N DPI L ++ KEI + K +N Sbjct: 248 RLTPHSSDDDDRAYRERDEVAAAKAN-DPIISFAAYLKEVGVLTDEKEKEINDKIAKEVN 306 Query: 342 NSVEFAQS 349 + E+A++ Sbjct: 307 EATEYAEN 314 >gi|229086734|ref|ZP_04218900.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock3-44] gi|228696555|gb|EEL49374.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock3-44] Length = 333 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 146/306 (47%), Gaps = 5/306 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ L YR MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 14 LSDEQVLEMYRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYA 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A ++M + G + G G M H KN G V Q Sbjct: 73 LPYYRDMGVVLAFGMTAKELMLSAFAKAGDPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQ 131 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 132 VPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 191 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + A N S R + + +PG +DG D AV + +A R +GP +IE ++YR Sbjct: 192 IPVEKQLACKNVSDRAIGYGMPGYTIDGNDPLAVYKAVKEAADRGRRGEGPTLIETVSYR 251 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D +E E D I L +E K++ + I+N + Sbjct: 252 LTAHSSDDDDRVYRDKEEVEEAKKKDSIITFAAYLKEVGVLTEEFEKQMLDEIMHIVNEA 311 Query: 344 VEFAQS 349 E+A++ Sbjct: 312 TEYAEN 317 >gi|94986435|ref|YP_605799.1| pyruvate dehydrogenase (lipoamide) [Deinococcus geothermalis DSM 11300] gi|94556716|gb|ABF46630.1| 2-oxoisovalerate dehydrogenase, OdbA [Deinococcus geothermalis DSM 11300] Length = 369 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 96/323 (29%), Positives = 154/323 (47%), Gaps = 7/323 (2%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-D 103 + F E YR M+ R F++K L G + G EA +G+ S+ G D Sbjct: 25 ARFTPEVLRDLYREMVRAREFDKKLVTLLRQGRTTFYAQAS-GMEATQLGLARSIRAGHD 83 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YR+H L GV ++++ G + +G+ H + F + +Q Sbjct: 84 WVWPYYRDHALALGLGVPMLDLVSQCLGTNSDLCRGRQMPHHFGVARFNFVSISSSIASQ 143 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V G A A KY +D+I V FGDGA ++G + N+A ++V ENNQ+A+ Sbjct: 144 VPPAAGSAMAQKYLGTDEITVCTFGDGATSEGDWHAGMNMAGAAGAPCLFVCENNQWAIS 203 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T++ +A + + ++ +PG VDG DI AV + RA KGP ++E LTYR Sbjct: 204 TNLRAQTASESIHIKAKAYGMPGYYVDGNDIVAVIEVLSHVAEEVRAGKGPALVECLTYR 263 Query: 284 YRGHSMSDP---ANYRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNVRKI 339 HS +D NYRTREE+N + DPI +V + L H S + ++ + Sbjct: 264 IGSHSNADADAEKNYRTREEVNAWVAR-DPIVRVERLLEHLGAPVSAEERADLISAAHRE 322 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 ++ +V A++ +PD L+ D+ Sbjct: 323 VDEAVLKAEASGQPDWRILFEDV 345 >gi|288920107|ref|ZP_06414425.1| Pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EUN1f] gi|288348517|gb|EFC82776.1| Pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EUN1f] Length = 343 Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 89/251 (35%), Positives = 132/251 (52%), Gaps = 5/251 (1%) Query: 57 RLMLLIRRFEEKAGQLY-GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 R M+ IR EE+ +LY + H IGQEA VG+ +L D + +R H Sbjct: 14 RDMVRIRCVEEELAELYRDEQEMRTPAHFSIGQEATAVGVCAALRPTDVVYAGHRSHAPY 73 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G D ++AEL GRQ G ++G+GGSMH+ GF G I+ + + G A+A Sbjct: 74 LAKGGDLRAMVAELHGRQTGCARGRGGSMHLVDRAVGFDGSAAILAEMIPVAVGAAWAFA 133 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS-RASAQTN 234 +++ V FGDGA +G +ES N AA+ + V++V ENN Y++ + + R T Sbjct: 134 LTGQNRVAVTFFGDGAVEEGTFHESVNFAAVHRVPVVFVCENNLYSVSSPLRVRQPTATT 193 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS---MSD 291 S+R ++ + VDG D+ AV A +A R GP +E+ TYR+R H+ Sbjct: 194 ISERVAAYGVWSRDVDGNDVSAVHAAAGEAAERARDGGGPAFLELRTYRWREHAGPGWDH 253 Query: 292 PANYRTREEIN 302 YR+REEI+ Sbjct: 254 DHGYRSREEID 264 >gi|209519435|ref|ZP_03268231.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Burkholderia sp. H160] gi|209500102|gb|EEA00162.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Burkholderia sp. H160] Length = 362 Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 93/308 (30%), Positives = 147/308 (47%), Gaps = 12/308 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L R F+ KA L G +G F +GQEA+ VG+ ++ D + +YR+H Sbjct: 39 YRAMVLTRAFDTKAVALQRTGKLGTFAS-SVGQEAIGVGVASAMQPDDVLFPSYRDHAAQ 97 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L GV M E GG +G FS + +G QV G A+A + Sbjct: 98 LLRGV----TMTESLLYWGGDERGSN-----FSVPRNDFPNCVPIGTQVCHAAGAAYAFQ 148 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R ++ V FGDG ++G YE+ N+A +W ++ VI NNQ+A+ S SA Sbjct: 149 LRHEARVAVAIFGDGGTSKGDFYEAMNMAGVWQAPLVLVINNNQWAISVPRSSQSAAQTL 208 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 +++ ++ I G+QVDG D+ AV + ++A R GP +IE L+YR H+ +D A Sbjct: 209 AQKAIAAGIDGLQVDGNDVVAVHQVVQSSLAKARRGDGPTLIEALSYRLGDHTTADDATR 268 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR E IN + R + N W D +++ + + +V+ + PD Sbjct: 269 YRDSEVINAQWEYEPLLRLRRYLMRMNVWDKAQD-EQLAKVCHEQVEQAVDEYLAIPPPD 327 Query: 355 PAELYSDI 362 A ++ + Sbjct: 328 TAAMFDHL 335 >gi|148377361|ref|YP_001256237.1| pyruvate dehydrogenase E1 component, alphasubunit [Mycoplasma agalactiae PG2] gi|148291407|emb|CAL58791.1| Pyruvate dehydrogenase E1 component, alphasubunit [Mycoplasma agalactiae PG2] Length = 363 Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 85/298 (28%), Positives = 155/298 (52%), Gaps = 13/298 (4%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 VD ++ F+ S K++ + Y+ M+ R+++ + L G +G F +G+EA + Sbjct: 24 VDGKLIQEFKPSAETKKKLVEMYKNMIRSRQWDLYSLTLQKTGRLGTFAP-ALGEEAALT 82 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G+ +L + D I YR LA G+ KI + G + G + ++ + Sbjct: 83 GIGFNLNKEDWFIPHYRVLPTQLARGISMDKIYSYWQGSEIGSAFAGTNTLPI------- 135 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 H ++G+QV + G+A A KY+ + +V G+G N+G+ +E N+A++ ++ Sbjct: 136 ---HVVIGSQVPIAAGVAQALKYQGKKALAMVTIGNGGTNEGEFHEGLNMASVRKWPLVT 192 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 V+ NNQ+A+ + S+R S+++PG++VDG D+ AV M++ Y R G Sbjct: 193 VVMNNQWAISVPEHNSYIVKTLSQRAKSYDMPGVRVDGNDLIAVNEVMEEVYYYVREGNG 252 Query: 274 PIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 P+++EM+T+R H+ SD P YR+R E+ + +P ++ LL K +E D+K Sbjct: 253 PVLVEMVTWRQGQHTTSDNPRVYRSR-ELEMEKEKWEPFHRIEAYLLSEKLITEEDIK 309 >gi|218516225|ref|ZP_03513065.1| pyruvate dehydrogenase (acetyl-transferring) protein, alpha subunit [Rhizobium etli 8C-3] Length = 95 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 62/93 (66%), Positives = 77/93 (82%) Query: 272 KGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 KGPII+EMLTYRYRGHSMSDPA YRT+EE+ +MRS DPIEQV+ RL+ WASE DLK Sbjct: 3 KGPIILEMLTYRYRGHSMSDPAKYRTKEEVQKMRSEQDPIEQVKARLIEKGWASEDDLKA 62 Query: 332 IEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 I+ +VR I+ +S +FAQ+D EPD +ELY+DIL+ Sbjct: 63 IDKDVRDIVADSADFAQADPEPDASELYTDILL 95 >gi|152976567|ref|YP_001376084.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025319|gb|ABS23089.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Bacillus cytotoxicus NVH 391-98] Length = 333 Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 145/307 (47%), Gaps = 7/307 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ L YR MLL R+ +E+ L G + F C GQEA VG +L E D + Sbjct: 14 LSDEQVLEMYRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYV 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGA 162 + YR+ G +L G+ A ++M L+G GG H KN G V Sbjct: 73 LPYYRDMGVVLTFGMTAKELM--LSGFAKAEDPNSGGRQMPGHFGQKKNRIVTGSSPVTT 130 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 131 QVPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAI 190 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + A N S R + + +PG VDG D AV + +A R +GP +IE ++Y Sbjct: 191 SVPLEKQLACKNVSDRAIGYGMPGYTVDGNDPLAVYQAVKEAAERGRRGEGPTLIETVSY 250 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R HS D +E E D I L +E K++ + I+N Sbjct: 251 RLTAHSSDDDDRVYRDKEEVEEAKKKDSIFTFAAYLKEVGLLTEESEKQMLDEIMHIVNE 310 Query: 343 SVEFAQS 349 + E+A++ Sbjct: 311 ATEYAEN 317 >gi|126653078|ref|ZP_01725213.1| branched-chain alpha-keto acid dehydrogenase E1 component alpha chain (2-oxoisovalerate dehydrogenase alpha subunit) [Bacillus sp. B14905] gi|126590179|gb|EAZ84303.1| branched-chain alpha-keto acid dehydrogenase E1 component alpha chain (2-oxoisovalerate dehydrogenase alpha subunit) [Bacillus sp. B14905] Length = 338 Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 149/314 (47%), Gaps = 5/314 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + E L+ + ML+ RR +E+ L G + F C GQEA VG +L + D + Sbjct: 13 LSNEDVLAMFETMLMARRLDERMWLLNRSGKIP-FVISCQGQEAAQVGAAFALNKDKDYI 71 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 YR+ G +L G+ ++M + + S G+ H KN G V QV Sbjct: 72 APYYRDMGVVLHFGMTPRELMLSAFAKAEDPNSGGRQMPGHFGQKKNRILTGSSPVTTQV 131 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G+A A + ++ D + V G+G++NQG +E N A + L VI ++ENNQYA+ Sbjct: 132 PHAVGVALAGRLQKEDFVSFVTLGEGSSNQGDFHEGANFAGVHKLPVIIMVENNQYAISV 191 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 V R S RG+ + +PG+ VDG V + +A R +GP +IE +TYR Sbjct: 192 PVERQLGCAKVSDRGIGYGMPGVTVDGKCPLQVYKVVKEAADRARNGEGPSLIETVTYRL 251 Query: 285 RGHSM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D YRT E+I E ++ DPI K L +E EIE V +N + Sbjct: 252 TAHSSDDDDRQYRTAEDIAEGKAK-DPIVLFEKYLTDAGVMTEKVRTEIEERVMAEVNEA 310 Query: 344 VEFAQSDKEPDPAE 357 ++A++ P + Sbjct: 311 TDYAEAAPYAQPED 324 >gi|226357394|ref|YP_002787134.1| pyruvate dehydrogenase subunit alpha [Deinococcus deserti VCD115] gi|226319384|gb|ACO47380.1| putative pyruvate dehydrogenase subunit alpha (acetyl-transferring) [Deinococcus deserti VCD115] Length = 372 Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 103/340 (30%), Positives = 159/340 (46%), Gaps = 16/340 (4%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 S V D+P F + + LML R F+ K L G F G Sbjct: 16 SGVPVRDLP-------ERFTPQLLRDLHALMLRAREFDRKLITLLRQGRTT-FYAQSSGM 67 Query: 89 EAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMF 147 EA VG+ S+ G D + YR+H LA GV +++++ G S+G+ H Sbjct: 68 EATQVGLARSIRVGHDWVWPYYRDHTLGLAMGVPMFELISQCLGSNSDPSRGRQMPHHFA 127 Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 + + F + +QV G A A KY D+I V FGDGA ++G + N+A Sbjct: 128 AKRQNFVSISSSIASQVPPAAGNAMAQKYLGVDEITVCTFGDGATSEGDWHAGMNMAGAH 187 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 ++V ENNQ+A+ T + +A N + ++ +PG VDG DI AV A + Sbjct: 188 QAPALFVCENNQWAISTHLRAQTASENIHIKAKAYGMPGFYVDGNDIVAVMEVCAHAAEW 247 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDP---ANYRTREEINEMRSNHDPIEQVRKRLLH--NK 322 RA GP ++E LTYR HS +D +YRTREE+ E DPI ++ K L H + Sbjct: 248 VRAGNGPALVECLTYRVGSHSNADADAEKHYRTREEVEEWLGR-DPIVRIEKLLEHLGHP 306 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++E + I R++ ++ A++ +PD ++ D+ Sbjct: 307 ISAEERAQMIAQTHREVDEQVIQ-AEATGQPDWRIIFEDV 345 >gi|221127493|ref|XP_002165745.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 440 Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 89/311 (28%), Positives = 154/311 (49%), Gaps = 2/311 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 ++ Y++M+ + ++ + G + F C G+EA+ G +L + D + + YRE Sbjct: 98 VNVYKMMIQLNSMDKILYESQRQGRIS-FYMTCYGEEAIHFGSASALNDVDLIFSQYREQ 156 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G M + G + + G+ +H S + F + Q+ G A+ Sbjct: 157 GVLMWRGFPLESFMNQCYGNENDLGLGRQMPVHYGSKVHNFVTISSTLATQMPNAVGAAY 216 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K ++S+ V FG+GAA++G + +FN AA + +I++ NN YA+ T V Sbjct: 217 ALKMQKSNSCAVCYFGEGAASEGDAHAAFNFAATLDCPIIFICRNNGYAISTPVKDQYRG 276 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 S RG + IP ++VDG D AV KA + C P++IE +TYR HS SD Sbjct: 277 DGISARGSGYGIPTIRVDGNDFLAVYNVTKKARSICINENRPVLIEAMTYRVGHHSTSDD 336 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 ++ YR+ E+ + PI ++R L + W SE + + ++ V+K I + A+ K Sbjct: 337 SSAYRSANEVKYWKDIDSPINRLRNYLENKGWWSEEENENLKKEVQKNIMQAFLKAEQTK 396 Query: 352 EPDPAELYSDI 362 +P L+SD+ Sbjct: 397 KPAVVNLFSDV 407 >gi|162449842|ref|YP_001612209.1| pyruvate dehydrogenase (acetyl-transferring) [Sorangium cellulosum 'So ce 56'] gi|161160424|emb|CAN91729.1| Pyruvate dehydrogenase (acetyl-transferring) [Sorangium cellulosum 'So ce 56'] Length = 396 Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 94/337 (27%), Positives = 162/337 (48%), Gaps = 17/337 (5%) Query: 30 SVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQE 89 S+D P LE EV ++ Y+ M+ R +E+ L G +G F G+E Sbjct: 46 SLDPAHDPKLEPSEV--------IALYKAMMRTRLLDERLVALQRQGRIG-FHIGSQGEE 96 Query: 90 AVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFST 149 A ++G + D + YRE G L G+ + + + G KG+ H ++ Sbjct: 97 ATVLGSVSATRPQDWVFPCYREFGAALWRGLPLQRYIDNMFGNANDTVKGRQMPDH-YTY 155 Query: 150 KNGFYGG-HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 + G +G +G Q++ G A+A K +R + + + FGDGA + + N A ++ Sbjct: 156 REGHFGSVSSPIGTQITQAVGFAWAAKLKRDELVTLAYFGDGATSSSDFHSGLNFAGVFK 215 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 + VI++ NN +A+ R ++ F+ +G ++ +PG++VDG D+ AV A+A Sbjct: 216 VPVIFLCRNNGWAISVPTERQTSSNTFAGKGAAYGVPGVRVDGNDVFAVVKVTRDAIARA 275 Query: 269 RAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 +G +IE +TYR GHS S DP YR ++ R DPI ++R+ + + +E Sbjct: 276 SRGEGATLIEAMTYRLSGHSTSDDPKAYRPDAWLDPWR-RLDPIARLRRHVERTQGWTEA 334 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPA--ELYSDI 362 +EIE V + + A S+K P P ++ D+ Sbjct: 335 QDREIEAAVDAEVKACI--AVSEKVPPPPLDSMFEDV 369 >gi|150025107|ref|YP_001295933.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Flavobacterium psychrophilum JIP02/86] gi|149771648|emb|CAL43122.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Flavobacterium psychrophilum JIP02/86] Length = 658 Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 87/313 (27%), Positives = 156/313 (49%), Gaps = 4/313 (1%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 F+ + + L Y+ +L R EEK L G V + IGQEA+ VG+ L + Sbjct: 3 FDRKNISNQTLLDLYKRILKPRLIEEKMLILIRQGKVSKWFS-GIGQEAISVGITAVLDK 61 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 + ++ +R G + ++ ++ G+ G +KG+ S H + + G +G Sbjct: 62 DEYILPMHRNLGVFTGRDIPLHRLFSQWQGKANGFTKGRDRSFHFGTQEYNIIGMISHLG 121 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ + GIA ANK +++ K+ V G+GA ++G +E+ NIA++W L V++VIENN Y Sbjct: 122 PQLGVADGIALANKLKKNGKVTAVFTGEGATSEGDFHEALNIASVWELPVLFVIENNGYG 181 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T + N + +G+ F + VDG +I V + + A + + P+++E T Sbjct: 182 LSTPTNEQYRCENLADKGIGFGMESHIVDGNNILDVYNLISELKASMKENPRPVLLEFKT 241 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 +R RGH + Y +++ +M + DP+E R L S+ D + ++K I+ Sbjct: 242 FRMRGHEEASGTKY-VPQQLMDMWAIKDPVENFRSYLKATAVLSDDDDEAFRAELKKEID 300 Query: 342 NSVEFAQSDKEPD 354 ++A KEP+ Sbjct: 301 --TDWALVQKEPE 311 >gi|291004749|ref|ZP_06562722.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Saccharopolyspora erythraea NRRL 2338] Length = 376 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 88/313 (28%), Positives = 153/313 (48%), Gaps = 18/313 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L+RR + + L G +G + L +GQEA +G +L D +YREHG Sbjct: 44 YRDMVLVRRTDREGNALQRQGQLGIWVPL-LGQEAAQIGAGRALKPQDMAFPSYREHGVA 102 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 G+D ++++ G G K H+++ ++G Q G A + Sbjct: 103 WCRGLDPTEVLGIFRGTDHGSWDPKATGFHLYTI---------VIGNQCLNAAGYAMGQR 153 Query: 176 Y--RRSD---KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 + R D + +V FGDGA +QG V+E+ AA+++ +++ +NNQ+A+ R S Sbjct: 154 FEGRVGDDDGEATMVFFGDGATSQGDVHEAMVWAAVYDAPLVFFCQNNQWAISEPTERQS 213 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + +R + PG++VDG D+ A A A+ CR GP+++E TYR H+ S Sbjct: 214 -RVPLYQRASGYGFPGIRVDGNDVLASLAVSKWALDECRHGNGPVLVEAFTYRMDAHTTS 272 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D A YR +E+ + DPIE++R L+ + A + +E ++ ++ + Sbjct: 273 DDATRYRLADELEAWKLK-DPIERLRVHLVREQIAGQDFFDSVEAESDELAARFRDYCFN 331 Query: 350 DKEPDPAELYSDI 362 +P P ++S + Sbjct: 332 LADPPPQRMFSQV 344 >gi|269124598|ref|YP_003297968.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Thermomonospora curvata DSM 43183] gi|268309556|gb|ACY95930.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermomonospora curvata DSM 43183] Length = 380 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 92/323 (28%), Positives = 159/323 (49%), Gaps = 18/323 (5%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E E+ + YR ++++RR + +A L G +G + L +GQEA VG +L E D + Sbjct: 41 ELTPEEVRALYRDLVMVRRIDMEAVALTRQGELGLWASL-LGQEAAQVGSGRALGERDMV 99 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 YREHG GVD ++++ G G + H+++ ++G+Q Sbjct: 100 FPTYREHGVAWCRGVDPIRLLSLFRGLSNGGWDPAEHNFHLYTI---------VIGSQTL 150 Query: 166 LGTGIAFA---NKYRRSDKIC--VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 TG A + +DK + FGDGA +QG V ESF A+++N +++ +NNQ+ Sbjct: 151 HATGYAMGIQRDGVLGTDKAAAAIAYFGDGATSQGDVNESFVFASVFNAPIVFFCQNNQW 210 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ + + + + +R F PG++VDG D+ A A +A+ R+ +GP +IE Sbjct: 211 AISEPLEKQT-RIPLYRRAQGFGFPGLRVDGNDVFACLAVTRRALEAARSGQGPTLIEAY 269 Query: 281 TYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR H+ + DP YR E+ + DPIE+V+ L+ N+ A L +E ++ Sbjct: 270 TYRMGAHTTTDDPTRYRLEAELEAWKLK-DPIERVKAYLIKNEQADAEFLAGVEEEAKQY 328 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 + +P+P ++ + Sbjct: 329 AADLRRRCLQLPDPEPGAIFEHV 351 >gi|157962067|ref|YP_001502101.1| 3-methyl-2-oxobutanoate dehydrogenase [Shewanella pealeana ATCC 700345] gi|157847067|gb|ABV87566.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella pealeana ATCC 700345] Length = 392 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/283 (27%), Positives = 144/283 (50%), Gaps = 2/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA I+G +L +GD ++ YREH I G + M ++ + KG+ Sbjct: 78 FYMTCTGEEASIIGSTAALDDGDVILAQYREHAAIRYRGFTTEQFMNQMFSNEKDFGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + + Q+ TG+A++ K + + + FG+GAA++G + Sbjct: 138 QMPIHYGSEALNYQTISSPLATQIPQATGVAYSLKMQGKRNVAICYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ N VI+ NN YA+ T + RGV + + ++VDG D+ AV A Sbjct: 198 LNMAAVLNSPVIFFCRNNGYAISTPTDEQFKGNGIASRGVGYGMHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A AY + P++IE +TYR HS S DP+ YR+++E + + HDP+++ + ++ Sbjct: 258 TQQARAYALDNNAPVLIEAMTYRLGAHSSSDDPSGYRSKDEEAKWQ-QHDPVKRFKLWMI 316 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + W +E ++ + R+ + + ++ A+ P + D+ Sbjct: 317 NKGWMNEQRDADLYVKYREEVLSELKVAEKIPTPHIDNIIEDV 359 >gi|317122506|ref|YP_004102509.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Thermaerobacter marianensis DSM 12885] gi|315592486|gb|ADU51782.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermaerobacter marianensis DSM 12885] Length = 404 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 92/322 (28%), Positives = 156/322 (48%), Gaps = 11/322 (3%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L G + E+ L YR M+ R F+E+ L G +G + L GQEA VG + Sbjct: 24 LVGEPAPDLTDEKLLEFYRWMVFARLFDERCLNLQRQGRMGTYAPLS-GQEAAQVGSAFA 82 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L D + +YREH + G+ ++ GR+ G ++ + Sbjct: 83 LQAEDWVFPSYREHAVTMIHGLPMENVLLYWMGREEGNQIPPDVNVFTVAVP-------- 134 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + Q+ G A+A K R + +V FGDGA ++G +E N A ++ + +++ +NN Sbjct: 135 -IATQIPHAVGAAWAAKIRGDRRAFIVYFGDGATSEGDFHEGCNFAGVFKVPLVFFCQNN 193 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 Q+A+ + R +A +++ V++ PG++VDG D+ AV +A+ RA +GP +IE Sbjct: 194 QFAISVPLHRQTASETIAQKAVAYGFPGVRVDGNDVLAVYKVTKEALDRARAGEGPTLIE 253 Query: 279 MLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 +TYR+ H+ + DP YR REE+ E R DPI ++R+ L E + I R Sbjct: 254 AVTYRFGPHTTADDPTRYRAREELEEWRERRDPITRMRRFLTARGLLDEEADRAIAEEAR 313 Query: 338 KIINNSVEFAQSDKEPDPAELY 359 + I +V + + P ++ Sbjct: 314 QRIAAAVRTVEQKPKAPPESIF 335 >gi|172056426|ref|YP_001812886.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Exiguobacterium sibiricum 255-15] gi|171988947|gb|ACB59869.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Exiguobacterium sibiricum 255-15] Length = 350 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 87/315 (27%), Positives = 157/315 (49%), Gaps = 16/315 (5%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 K+ L+ + M IR F+ KA L G +G + GQEA VG +L + D + Sbjct: 26 LTKDLSLALFTHMNRIRTFDRKAINLQRQGRLGTYAPFE-GQEAAQVGSAYALQDKDWVF 84 Query: 107 TAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 YR+HG L G D + GR +G ++ + +H+F + Q+ Sbjct: 85 PTYRDHGATLTFGADMVRTFLYWNGRVEGCVATDE---LHIFPPAVP-------IATQIP 134 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A+A K + S ++ V FGDGA ++G +E N A+++ VI +NN YA+ Sbjct: 135 HAVGAAWAEKRKGSTQVAVAYFGDGATSEGDFHEGMNFASVFQAPVILFNQNNGYAISVP 194 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + +++ +++ +P +++DG D+ AV TM KA+ R+ GP +IE +T+R+ Sbjct: 195 IQKQMHSETIAQKALAYGMPSVRIDGNDVFAVYFTMQKALERARSGGGPTLIEAVTWRFG 254 Query: 286 GHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 H+ + DP+ YR +E R DP+E++ + + E +++ I ++ + +V Sbjct: 255 AHTTADDPSKYRDQE---RSRDRVDPLERLEAFMKEQGFYDEQEIETIRSRHQEEVEAAV 311 Query: 345 EFAQSDKEPDPAELY 359 + +S PD +L+ Sbjct: 312 KTMESFPPPDVNDLF 326 >gi|312622976|ref|YP_004024589.1| transketolase central region [Caldicellulosiruptor kronotskyensis 2002] gi|312203443|gb|ADQ46770.1| Transketolase central region [Caldicellulosiruptor kronotskyensis 2002] Length = 823 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 107/366 (29%), Positives = 162/366 (44%), Gaps = 68/366 (18%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-------CHLCIGQEAVIVGM 95 E F+ +Q + YR M +IR FE + G G HL IGQEA VG Sbjct: 35 ERQNFSDDQLIRIYRDMFIIREFETMLSLIKTTGEYNGIKYDYPGPAHLSIGQEAAAVGQ 94 Query: 96 KMSLTEGDQMITAYREHGHILACGV---------DASKIM-------------------- 126 L + D + ++R HG ++A G+ + KIM Sbjct: 95 AFVLDKDDFIFGSHRSHGEVIAKGLSTIEKLSDNELLKIMESYFDGSILRVVEENLKNIS 154 Query: 127 ---------------AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 AE+ GR+ G KG GGSMH+F G Y + IVG + G A Sbjct: 155 SIKELAVNFFLYGTLAEIFGRETGFQKGLGGSMHVFFPPFGIYPNNAIVGGSADIAVGAA 214 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAA------LWN------LNVIYVIENNQ 219 K + + I VV GDG+ G V+E+ +A+ LW+ L +I+ +NQ Sbjct: 215 LFKKINKKNGIVVVNIGDGSMACGPVWEAMCLASMDQYKKLWDDEYRGGLPIIFNFMDNQ 274 Query: 220 YAMGTSVSRASAQTNFSKR-GVSFNIPGM---QVDGMDIRAVKATMDKAVAYCRAHKGPI 275 YAMG + + R G N M +VDG + AV M + +GP+ Sbjct: 275 YAMGGQTRGETMGYDMLARVGAGVNPEQMHAERVDGYNPLAVIDAMRRKKYLLEQKQGPV 334 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +++++TYR GHS SD ++YRT+EE+ E + DPI + L+ +E ++EI+ Sbjct: 335 LLDIVTYRLTGHSPSDSSSYRTKEEV-EAWAAQDPIVTYKDELIKAGVVTEEKIEEIQSY 393 Query: 336 VRKIIN 341 V+++I Sbjct: 394 VKELIT 399 >gi|315425647|dbj|BAJ47306.1| pyruvate dehydrogenase E1 component subunit alpha [Candidatus Caldiarchaeum subterraneum] Length = 358 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 91/311 (29%), Positives = 161/311 (51%), Gaps = 12/311 (3%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+++R F++ +++ +G + + GQEA +VG SL++ D YRE L Sbjct: 39 RDMVVLRAFDQWMLKIHPLGKASRYAPVE-GQEASVVGSVHSLSDVDWTFPTYRE----L 93 Query: 117 ACGVDASKIMAELTGRQGGISKG--KGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFA 173 G+ + L R S KG + ++ K G G V + G+A A Sbjct: 94 TVGLLRGAPLTTLIHRMFATSLDHMKGHEITLYGDKRYRIVVGAGAVSLMCPVAVGMAMA 153 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K R ++ +V GDGA ++G +E+ N A ++ VI+ ++NNQ+A+ + +A Sbjct: 154 AKKRGEKEVFLVYLGDGATSKGDFHEAINWAGVFKPPVIFFVQNNQWAISIPFKKQTASP 213 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DP 292 + + ++ IPG++VDG D+ AV + V RA +G ++IE +TYR H+ + DP Sbjct: 214 TIAVKAKAYGIPGIRVDGNDVLAVYTVCRRFVEKARAGEGAVLIEAVTYRMGPHTTADDP 273 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YR+ +E+ EMR+ DP++++R L N W+ E + K +E + R + + E A+ Sbjct: 274 SKYRSEKEVEEMRA-FDPLKRMRIYLTRNGLWSPEEEQKIVE-SFRDELRRATEEAEKTP 331 Query: 352 EPDPAELYSDI 362 P P ++ D+ Sbjct: 332 PPHPRVIFEDV 342 >gi|308050068|ref|YP_003913634.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Ferrimonas balearica DSM 9799] gi|307632258|gb|ADN76560.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Ferrimonas balearica DSM 9799] Length = 394 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 90/317 (28%), Positives = 148/317 (46%), Gaps = 3/317 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +K L Y IR +E+ G + F C G+EA + G +L D ++ Sbjct: 45 IDKALALRIYDTCAFIRVLDERMLAAQRQGRIS-FYMTCTGEEAAVTGSAAALEAQDMIM 103 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YRE + G + M ++ + KG+ +H S + +G Q+ Sbjct: 104 AQYREQAALRYRGFTTEQFMNQMFSNAKDLGKGRQMPIHYGSQALNYMTISSPLGTQIPQ 163 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A+ K + + FG+GAA++G + N+AA+ VI+ NN YA+ T Sbjct: 164 AAGYAYGQKLAGDPAVTICYFGEGAASEGDFHAGLNMAAVHQAPVIFFCRNNGYAISTPA 223 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + A + RGV + I ++VDG D+ AV A +A A + + P++IE +TYR Sbjct: 224 NEQFAGDGIAPRGVGYGIKTIRVDGNDMLAVLAATQQARAIALSEQCPVLIEAMTYRLGA 283 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HS S DP YR+REE + R HDP+ + + L++ W SE + + + R+ + +V+ Sbjct: 284 HSSSDDPTGYRSREEEAKWR-EHDPVLRYKLWLINKGWWSEAEDEALYQTYREEVLAAVK 342 Query: 346 FAQSDKEPDPAELYSDI 362 A+ P L SD+ Sbjct: 343 VAEKIPAPGLDTLVSDV 359 >gi|17546516|ref|NP_519918.1| pyruvate dehydrogenase E1 component alpha subunit oxidoreductase [Ralstonia solanacearum GMI1000] gi|17428814|emb|CAD15499.1| probable pyruvate dehydrogenase e1 component (alpha subunit) oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 363 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 87/273 (31%), Positives = 140/273 (51%), Gaps = 13/273 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ YR M+L R F+ KA L G +G F +GQEA+ VG+ ++ D + +YR+H Sbjct: 36 LALYRAMVLTRAFDTKAIALQRTGKLGTFAS-SVGQEAIGVGVASAMRAEDVLFPSYRDH 94 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L GV MAE GG +G F+ + +G QV G A+ Sbjct: 95 SAQLLRGVS----MAESLLYWGGDERGS-----CFAAVREDFPNCVPIGTQVCHAAGAAY 145 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + RR ++ V FGDG ++G YE N+A +W ++ ++ NNQ+A+ SR +A Sbjct: 146 AFQLRREPRVAVAVFGDGGTSKGDFYEGMNLAGVWGAPLVLIVNNNQWAISVPRSRQTAA 205 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ I G QVDG D+ AV+ A+ R+ GP +IE L+YR H+ +D Sbjct: 206 QTLAQKAIAAGIAGRQVDGNDVIAVRQAAQDALDKARSGGGPTLIEALSYRLGDHTTADD 265 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLH-NKW 323 A YR + + + + +PI ++R L+ + W Sbjct: 266 ATRYRDPDSVKQAWA-REPILRLRNYLMRLSAW 297 >gi|310642641|ref|YP_003947399.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Paenibacillus polymyxa SC2] gi|309247591|gb|ADO57158.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Paenibacillus polymyxa SC2] Length = 342 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 157/318 (49%), Gaps = 10/318 (3%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAY 109 Q + YR MLL RRF+E+ L G + F IGQEA VG +L E D + Y Sbjct: 22 QVIDMYRYMLLARRFDERNMLLQRAGKIN-FHVSGIGQEAAQVGAAFALDREKDYFLPYY 80 Query: 110 REHGHILACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 R++G +LA G+ ++M + S G+ H S + G V QV Sbjct: 81 RDYGFVLAVGMTPRELMLSAFAKADDPNSGGRQMPGHFGSKRLRIVTGSSPVTTQVPHAV 140 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A A K ++ D + V FG+G++NQG +E N A + L VI + ENNQYA+ + + Sbjct: 141 GVALAAKMQKKDFVSFVTFGEGSSNQGDFHEGCNFAGVQKLPVIIMCENNQYAISVPIHK 200 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 A S R + + PG++VDG D AV A + +A +GP +IE + YR HS Sbjct: 201 QLA-GKVSDRALGYGFPGIRVDGNDALAVYAAVKEARERAVRGEGPTLIEAMMYRLSPHS 259 Query: 289 MSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SD YRT+EE++E + D + +++ L+ E ++ + + ++E+A Sbjct: 260 TSDNDLAYRTKEEVDENWAK-DGVARMKSYLIECGIWDEAKDADLSAELLLEVKEAIEYA 318 Query: 348 QSDKEPDPAE----LYSD 361 + P P + +Y+D Sbjct: 319 DNAPFPKPEDTLLHVYAD 336 >gi|134103716|ref|YP_001109377.1| pyruvate dehydrogenase E1 component, alpha subunit [Saccharopolyspora erythraea NRRL 2338] gi|133916339|emb|CAM06452.1| pyruvate dehydrogenase E1 component, alpha subunit [Saccharopolyspora erythraea NRRL 2338] Length = 372 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 88/313 (28%), Positives = 153/313 (48%), Gaps = 18/313 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L+RR + + L G +G + L +GQEA +G +L D +YREHG Sbjct: 40 YRDMVLVRRTDREGNALQRQGQLGIWVPL-LGQEAAQIGAGRALKPQDMAFPSYREHGVA 98 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 G+D ++++ G G K H+++ ++G Q G A + Sbjct: 99 WCRGLDPTEVLGIFRGTDHGSWDPKATGFHLYTI---------VIGNQCLNAAGYAMGQR 149 Query: 176 Y--RRSD---KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 + R D + +V FGDGA +QG V+E+ AA+++ +++ +NNQ+A+ R S Sbjct: 150 FEGRVGDDDGEATMVFFGDGATSQGDVHEAMVWAAVYDAPLVFFCQNNQWAISEPTERQS 209 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + +R + PG++VDG D+ A A A+ CR GP+++E TYR H+ S Sbjct: 210 -RVPLYQRASGYGFPGIRVDGNDVLASLAVSKWALDECRHGNGPVLVEAFTYRMDAHTTS 268 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D A YR +E+ + DPIE++R L+ + A + +E ++ ++ + Sbjct: 269 DDATRYRLADELEAWKLK-DPIERLRVHLVREQIAGQDFFDSVEAESDELAARFRDYCFN 327 Query: 350 DKEPDPAELYSDI 362 +P P ++S + Sbjct: 328 LADPPPQRMFSQV 340 >gi|239631469|ref|ZP_04674500.1| acetoin dehydrogenase complex [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525934|gb|EEQ64935.1| acetoin dehydrogenase complex [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 337 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 90/317 (28%), Positives = 155/317 (48%), Gaps = 9/317 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT---EGD 103 ++E L Y+ ++ RR +E+ L+ + +G F GQ A + M+L + D Sbjct: 18 LSRETILDVYKAVMRGRRVDER---LWQLTRIGKFSFNISGQGAEVGQAAMALAFDYDKD 74 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGG-ISKGKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ +L G+ IM G++ S G+ H S + V Sbjct: 75 YFLPYYRDLTAVLMWGMTTKDIMLAGFGKEADPASHGRQMPSHYGSKAHNIVSHSSPVST 134 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q + GIA+ + R D + VV GDG+ +QG+ E+ NIA + + V++V+ENN YA+ Sbjct: 135 QYPISAGIAYGAQMRGEDYVTVVTTGDGSFSQGECAEAMNIAGVHKMPVVFVVENNGYAI 194 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 A + RG +F G++V+G D +AV R GP +IE++ Sbjct: 195 SVPDKEQYAVEKLADRGPAFGFKGIRVNGSDFAETYLAFKQAVTDARQGNGPTLIEIMVE 254 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D YR+ EE+ E++ N DP++ +++L+ + +E D+ IE + IN Sbjct: 255 RLTSHSSDDDQRVYRSAEELAEIKEN-DPVKLFQQQLIDEGYLNEADIDRIEKELETEIN 313 Query: 342 NSVEFAQSDKEPDPAEL 358 + + A++ +PDPA++ Sbjct: 314 QATDEAEAMPDPDPAKI 330 >gi|218295496|ref|ZP_03496309.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermus aquaticus Y51MC23] gi|218244128|gb|EED10654.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermus aquaticus Y51MC23] Length = 346 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 91/280 (32%), Positives = 137/280 (48%), Gaps = 14/280 (5%) Query: 42 FEVSEFNKEQ--ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 E EF E+ L YR M R F+EKA L G +G + +GQEA VG+ ++L Sbjct: 9 LEKGEFPLEEGEALRLYRAMRRARFFDEKAVTLQRQGRLGVYPPF-MGQEAAQVGVALAL 67 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD ++ +YRE +LA G+ ++ G +G N + Sbjct: 68 GEGDWVVPSYRESAMLLARGLPIHVLILYWRAHPAGWGFPEG-----VRAVNPYIP---- 118 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + Q+ G+A A +YR D + GDG ++G +E N AA++ V+++++NN Sbjct: 119 IATQIPQAVGLALAGRYRGEDWVVATSIGDGGTSEGDFHEGLNFAAVFQAPVVFLVQNNG 178 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ ++ ++R + +PG+ VDG D AV KAV R +GP ++E Sbjct: 179 YAISVPRAKQMRVDYIARRAEGYGMPGVVVDGNDAFAVYLEAKKAVERARRGEGPTLLEA 238 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 LTYR H+ S DP YR REE E DPI ++RK L Sbjct: 239 LTYRLAPHTTSDDPTRYRAREE-EEAWRRKDPILRLRKAL 277 >gi|308069582|ref|YP_003871187.1| 2-oxoisovalerate dehydrogenase alpha subunit [Paenibacillus polymyxa E681] gi|305858861|gb|ADM70649.1| 2-oxoisovalerate dehydrogenase alpha subunit [Paenibacillus polymyxa E681] Length = 342 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 156/318 (49%), Gaps = 10/318 (3%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAY 109 Q + YR MLL RRF+E+ L G + F IGQEA VG L E D + Y Sbjct: 22 QVIDMYRYMLLARRFDERNMLLQRAGKIN-FHVSGIGQEAAQVGAAFGLDREKDYFLPYY 80 Query: 110 REHGHILACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 R++G +LA G+ ++M + S G+ H S + G V QV Sbjct: 81 RDYGFVLAVGMTPRELMLSAFAKADDPNSGGRQMPGHFGSKRLRIVTGSSPVTTQVPHAV 140 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A A K ++ D + V FG+G++NQG +E N A + L VI + ENNQYA+ + + Sbjct: 141 GVALAAKMQKKDFVSFVTFGEGSSNQGDFHEGCNFAGVQKLPVIIMCENNQYAISVPIHK 200 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 A S R + + PG++VDG D AV A + +A +GP +IE + YR HS Sbjct: 201 QLA-GKVSDRALGYGFPGIRVDGNDALAVYAAVKEARERAVRGEGPTLIEAMMYRLSPHS 259 Query: 289 MSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SD YRT+EE++E + D + +++ L+ E ++ + + ++E+A Sbjct: 260 TSDNDLAYRTKEEVDENWAK-DGVARMKSYLIECSIWDEAKDADLSAELLLEVKEAIEYA 318 Query: 348 QSDKEPDPAE----LYSD 361 + P P + +Y+D Sbjct: 319 DNAPFPKPEDTLLHVYAD 336 >gi|16800477|ref|NP_470745.1| hypothetical protein lin1409 [Listeria innocua Clip11262] gi|16413882|emb|CAC96640.1| lin1409 [Listeria innocua Clip11262] gi|313619053|gb|EFR90866.1| 2-oxoisovalerate dehydrogenase subunit alpha [Listeria innocua FSL S4-378] Length = 331 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 151/309 (48%), Gaps = 7/309 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGH 114 Y ML+ RR +E+ L G + F GQE +G + E D + YR+ Sbjct: 17 YETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLEKDYALPYYRDLAV 75 Query: 115 ILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +LA G+ A IM + + S G+ H N V Q GI A Sbjct: 76 VLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLA 135 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K D G+G++NQG +E N A++ L V++VI NNQYA+ S+ A Sbjct: 136 AKMAGDDIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQYAISVPASKQYAAE 195 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-SMSDP 292 S R + + IPG +VDG ++ V A +A R +GP +IE ++YR+ H S D Sbjct: 196 KLSDRALGYGIPGERVDGSNMGEVYAAFKRAADRARNGEGPTLIETVSYRFTPHSSDDDD 255 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD-- 350 ++YR+REE++E + DP++ + LL + +E + EIE ++ K +N + ++A+S Sbjct: 256 SSYRSREEVDEAKGK-DPLKIFQTELLEEGYLTEEKIAEIEKSIAKEVNEATDYAESAAY 314 Query: 351 KEPDPAELY 359 EP+ + LY Sbjct: 315 AEPESSLLY 323 >gi|297622990|ref|YP_003704424.1| 3-methyl-2-oxobutanoate dehydrogenase [Truepera radiovictrix DSM 17093] gi|297164170|gb|ADI13881.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Truepera radiovictrix DSM 17093] Length = 369 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 11/293 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQ 104 + +E+ L+ YR ++ R +E+ G+L MG F G E +G+ +L G D Sbjct: 32 DLTEEKLLTMYRDLVRARLLDERLGKLQRMGKTS-FVAPAAGHEGAHIGVAHALRPGFDW 90 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR+ G +LA GV ++ A+ + +KG+ H S + + + + Sbjct: 91 LFPYYRDMGMVLALGVPPKELFAQSLATRADPNKGRQMPAHPGSAALNVFTAASPIASHL 150 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G A + K R + ++ V FGDGA ++G + + N A + ++ V ENN+YA+ Sbjct: 151 GPAVGAAISMKLRGTGQVAVASFGDGATSEGDFHAAVNFAGVQGAPIVLVCENNRYAISV 210 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + +A N + + ++ +PG VDGMD A M + V R+ GP ++EM+ YRY Sbjct: 211 DFHKQTASENIAVKAHAYGMPGYVVDGMDTLACYYVMQEVVERARSGHGPALVEMVVYRY 270 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQV-----RKRLLHNKWASEGDLKE 331 HS + D A YR REE+ R DP+ + R+ LL + A E L+E Sbjct: 271 GAHSSADDDARYRPREEVQRWR-QRDPLRRFKAFLERRGLLDD--AKEAALRE 320 >gi|228998952|ref|ZP_04158534.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus mycoides Rock3-17] gi|228760569|gb|EEM09533.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus mycoides Rock3-17] Length = 335 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 146/306 (47%), Gaps = 5/306 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ + YR MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 16 LSDEQVVEMYRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYA 74 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A ++M + G + G G M H KN G V Q Sbjct: 75 LPYYRDMGVVLAFGMTAKELMLSGFAKAGDPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQ 133 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 134 VPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 193 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + A N S R + + +PG VDG D AV + +A R +GP +IE ++YR Sbjct: 194 IPVEKQLACKNVSDRAIGYGMPGYTVDGNDPLAVYKAVKEAADRGRRGEGPTLIETVSYR 253 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D +E E D I L +E K++ + I+N + Sbjct: 254 LTAHSSDDDDRVYRDKEEVEEAKKKDSIFTFAAYLKEVGVLTEESEKQMLDEIMHIVNEA 313 Query: 344 VEFAQS 349 E+A++ Sbjct: 314 TEYAEN 319 >gi|256822708|ref|YP_003146671.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Kangiella koreensis DSM 16069] gi|256796247|gb|ACV26903.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Kangiella koreensis DSM 16069] Length = 363 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 158/308 (51%), Gaps = 11/308 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M L+R F+ KA L G +G + +GQEA+ +G ++T D +I YR G + Sbjct: 41 YREMALLRAFDAKAYALQRTGKMGTYP-ASLGQEAIGIGYGDAMTADDVLIPYYRSTGAM 99 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G+ M E+ GG +G S+ K+ F I Q+ +G+A A + Sbjct: 100 LKHGI----TMREILLYWGGDEEGSNYSV----AKDDFPICVPIAN-QIVHASGVAKAIQ 150 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R + G+G ++G YE N+A +WNL V+++I NNQ+A+ +A + Sbjct: 151 MRGQKRAVATEIGEGGTSEGDFYEGINVAGIWNLGVVFMINNNQWAISVPTEIQTACETY 210 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 +++ ++ I G+QVDG DI AVK D A R GP +IE +TYR H+ +D A+ Sbjct: 211 AQKAIAAGIEGVQVDGNDIIAVKQVADYAFEKARNGGGPTLIEAITYRLCDHTTADDASR 270 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 ++ E ++P+ ++RK L NK S+ D + ++ + K ++ +V+ + +P P Sbjct: 271 YDDPKVKEEAWKNEPMVRLRKYLEANKAWSDKDEEAMKAEIAKEVDAAVKEYEEAPKPGP 330 Query: 356 AELYSDIL 363 EL D L Sbjct: 331 -ELMFDHL 337 >gi|317129372|ref|YP_004095654.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Bacillus cellulosilyticus DSM 2522] gi|315474320|gb|ADU30923.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Bacillus cellulosilyticus DSM 2522] Length = 362 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 86/281 (30%), Positives = 145/281 (51%), Gaps = 13/281 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + EQ + M+ R ++++A L G +G + + GQEA ++G + +L + D Sbjct: 32 MPDLSDEQLKELMKRMVYTRIWDQRAISLNRQGRLGFYAPVA-GQEASMIGSQFALEKQD 90 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ GV + G G +G ++ M I+GAQ Sbjct: 91 WILPGYRDIPQIVFQGVPLEQAFLWSRGHLAGGQMPEGVNVMMPQI---------IIGAQ 141 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 ++ G+A K ++ D + + GDG A+QG YE N A +N+ ++V++NN++A+ Sbjct: 142 ITQTAGVAMGLKRKQKDAVAITYTGDGGASQGDFYEGMNFAGAYNVPAVFVVQNNRFAIS 201 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + SA +++ V+ I G+QVDGMDI AV A +A GP +IE LTYR Sbjct: 202 VPVEKQSAAKTIAQKAVAAGIHGVQVDGMDILAVYAATQEARKRGLDGNGPTLIETLTYR 261 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 Y H+M+ DP YRT ++++ DP+ + RK L K Sbjct: 262 YGPHTMAGDDPTRYRT-SDLDDEWEKKDPLVRFRKFLEAKK 301 >gi|228922915|ref|ZP_04086210.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836736|gb|EEM82082.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 333 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 146/306 (47%), Gaps = 5/306 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ L +R MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 14 LSDEQVLEMFRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYA 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A ++M + G + G G M H KN G V Q Sbjct: 73 LPYYRDMGVVLAFGMTAKELMLSAFAKAGDPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQ 131 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 132 VPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 191 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + A N S R + + +PG +DG D AV + +A R +GP +IE ++YR Sbjct: 192 IPVEKQLACKNVSDRAIGYGMPGYTIDGNDPLAVYKAVKEAADRGRRGEGPTLIETVSYR 251 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D +E E D I L +E K++ + I+N + Sbjct: 252 LTAHSSDDDDRVYRDKEEVEEAKKKDSIITFAAYLKEAGVLTEELEKQMLDEIMHIVNEA 311 Query: 344 VEFAQS 349 E+A++ Sbjct: 312 TEYAEN 317 >gi|251796659|ref|YP_003011390.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Paenibacillus sp. JDR-2] gi|247544285|gb|ACT01304.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Paenibacillus sp. JDR-2] Length = 359 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 93/295 (31%), Positives = 157/295 (53%), Gaps = 13/295 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+ R ++E+A L G +G + + GQEA ++G + +L + D + YR+ + Sbjct: 48 YR-MVFTRTWDERAVNLGRQGRLGFYAPVS-GQEASMIGSEYALNKDDFICPGYRDIPQL 105 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G+ + G Q G + +H+ + I+GAQV G+A A K Sbjct: 106 VWHGLPMYQGFLYSRGHQHGGQIPE--DVHVLMPQI-------IIGAQVLHAAGVAMAFK 156 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R ++ + GDG +++G YES N A ++ L VIYV++NN+YA+ T + +A + Sbjct: 157 KRGEKRVAITYTGDGGSSEGDFYESMNFAGVFKLPVIYVVQNNRYAITTPYEKQTAALSV 216 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 + + V+ I G+Q+DGMD+ AV + +A R +G +IEMLTYR+R HS+SD A Sbjct: 217 AHKSVAAGIKGIQIDGMDVLAVIKAVSEAAERGRNGEGATLIEMLTYRFRPHSLSDDATK 276 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 YRT+EE E DP+ + K L +E D ++ + +N +++ A++ Sbjct: 277 YRTKEEEAEW-GLKDPLIRFGKFLEKKGLWTEEDTNRVKEEAKAAVNENIKKAEA 330 >gi|113970365|ref|YP_734158.1| 3-methyl-2-oxobutanoate dehydrogenase [Shewanella sp. MR-4] gi|113885049|gb|ABI39101.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella sp. MR-4] Length = 392 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 83/284 (29%), Positives = 140/284 (49%), Gaps = 2/284 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA IVG +L D ++ YREH + G + M ++ + + KG+ Sbjct: 78 FYMTCTGEEAAIVGSVAALDAEDVILAQYREHAALRYRGFTTEQFMNQMFSNEKDLGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H + + Q+ TG+ ++ K + + V FG+GAA++G + Sbjct: 138 QMPIHYGCAALNYQTISSPLATQIPQATGVGYSLKMQGKRNVAVCYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ VI+ NN YA+ T A + RGV + + ++VDG D+ AV A Sbjct: 198 LNMAAVLKCPVIFFCRNNGYAISTPTEEQFAGNGIASRGVGYGMHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A AY H P++IE +TYR HS S DP+ YR++EE + + HDP+++ + L+ Sbjct: 258 TQQARAYAIEHNAPVLIEAMTYRLGAHSSSDDPSGYRSKEEEAKWQ-QHDPVKRFKLWLI 316 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + W +E D R+ + +V+ A+ P E+ D+ Sbjct: 317 NKGWLAEADDALRYEKYREEVLAAVKVAEKLPIPMLDEIIEDVF 360 >gi|228909998|ref|ZP_04073818.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis IBL 200] gi|229075869|ref|ZP_04208845.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock4-18] gi|229098632|ref|ZP_04229572.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock3-29] gi|229104767|ref|ZP_04235428.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock3-28] gi|229117657|ref|ZP_04247027.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock1-3] gi|229168906|ref|ZP_04296623.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus AH621] gi|229174838|ref|ZP_04302358.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus MM3] gi|228608506|gb|EEK65808.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus MM3] gi|228614498|gb|EEK71606.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus AH621] gi|228665749|gb|EEL21221.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock1-3] gi|228678640|gb|EEL32856.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock3-28] gi|228684711|gb|EEL38649.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock3-29] gi|228707184|gb|EEL59381.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus Rock4-18] gi|228849515|gb|EEM94349.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus thuringiensis IBL 200] Length = 333 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 146/306 (47%), Gaps = 5/306 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ L +R MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 14 LSDEQVLEMFRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYA 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A ++M + G + G G M H KN G V Q Sbjct: 73 LPYYRDMGVVLAFGMTAKELMLSAFAKAGDPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQ 131 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 132 VPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 191 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + A N S R + + +PG +DG D AV + +A R +GP +IE ++YR Sbjct: 192 IPVEKQLACKNVSDRAIGYGMPGYTIDGNDPLAVYKAVKEAADRGRRGEGPTLIETVSYR 251 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D +E E D I L +E K++ + I+N + Sbjct: 252 LTAHSSDDDDRVYRDKEEVEEAKKKDSIITFAAYLKEAGVLTEEFEKQMLDEIMHIVNEA 311 Query: 344 VEFAQS 349 E+A++ Sbjct: 312 TEYAEN 317 >gi|297564329|ref|YP_003683302.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848778|gb|ADH70796.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 371 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/322 (29%), Positives = 163/322 (50%), Gaps = 17/322 (5%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + + E+ + YR ++L+RRF+ +A L G +G + L +GQEA +G +L D Sbjct: 31 DISAEEIRALYRDLVLVRRFDSEAVSLQRQGELGLWASL-LGQEAAQIGSARALGAKDMA 89 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +YREHG G++ EL G G++ G G H ++GF+ ++G+Q Sbjct: 90 FPSYREHGVAWCRGIEPR----ELLGMFRGVTNG-GWDPH----EHGFHLYTIVIGSQTL 140 Query: 166 LGTGIAFANKYRRS---DKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 TG A + + D V+ FGDGA +QG E+FN A++ N V++ +NNQ+A Sbjct: 141 HATGYAMGVQRDGAVGEDGTAVISYFGDGATSQGDTNEAFNFASVNNAPVVFFCQNNQWA 200 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + + R A+ +R F PG++VDG D+ A A A++ R GP ++E T Sbjct: 201 ISEPLER-QARVPIYRRAAGFGFPGLRVDGNDVLACLAVTRVALSNAREGNGPTLVEAFT 259 Query: 282 YRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YR H+ + DP YR E++E ++ DPI +VR+ L A E ++ ++ Sbjct: 260 YRMGAHTTNDDPTRYRASAELDEWKAK-DPILRVRRYLERGGHADEEFFASVDAEADRLG 318 Query: 341 NNSVEFAQSDKEPDPAELYSDI 362 +S +P+P +++ ++ Sbjct: 319 EQVRTECRSLPDPEPLDIFHEV 340 >gi|191638441|ref|YP_001987607.1| Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Lactobacillus casei BL23] gi|190712743|emb|CAQ66749.1| Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Lactobacillus casei BL23] gi|327382472|gb|AEA53948.1| hypothetical protein LC2W_1615 [Lactobacillus casei LC2W] gi|327385670|gb|AEA57144.1| hypothetical protein LCBD_1648 [Lactobacillus casei BD-II] Length = 334 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 90/317 (28%), Positives = 155/317 (48%), Gaps = 9/317 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT---EGD 103 ++E L Y+ ++ RR +E+ L+ + +G F GQ A + M+L + D Sbjct: 15 LSRETILDVYKAVMRGRRVDER---LWQLTRIGKFSFNISGQGAEVGQAAMALAFDYDKD 71 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGG-ISKGKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ +L G+ IM G++ S G+ H S + V Sbjct: 72 YFLPYYRDLTAVLMWGMTTKDIMLAGFGKEADPASHGRQMPSHYGSKAHNIVSHSSPVST 131 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q + GIA+ + R D + VV GDG+ +QG+ E+ NIA + + V++V+ENN YA+ Sbjct: 132 QYPISAGIAYGAQMRGEDYVTVVTTGDGSFSQGECAEAMNIAGVHKMPVVFVVENNGYAI 191 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 A + RG +F G++V+G D +AV R GP +IE++ Sbjct: 192 SVPDKEQYAVEKLADRGPAFGFKGIRVNGSDFAETYLAFKQAVTDARQGNGPTLIEIMVE 251 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D YR+ EE+ E++ N DP++ +++L+ + +E D+ IE + IN Sbjct: 252 RLTSHSSDDDQRVYRSAEELAEIKEN-DPVKLFQQQLIDEGYLNEADIDRIEKELETEIN 310 Query: 342 NSVEFAQSDKEPDPAEL 358 + + A++ +PDPA++ Sbjct: 311 QATDEAEAMPDPDPAKI 327 >gi|229013373|ref|ZP_04170513.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus mycoides DSM 2048] gi|228747966|gb|EEL97831.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus mycoides DSM 2048] Length = 333 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 146/306 (47%), Gaps = 5/306 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ L +R MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 14 LSDEQVLEMFRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYA 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A ++M + G + G G M H KN G V Q Sbjct: 73 LPYYRDMGVVLAFGMTAKELMLSAFAKAGDPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQ 131 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 132 VPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 191 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + A N S R + + +PG +DG D AV + +A R +GP +IE ++YR Sbjct: 192 IPVEKQLACKNVSDRAIGYGMPGYTIDGNDPLAVYKAVKEAANRGRRGEGPTLIETVSYR 251 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D +E E D I L +E K++ + I+N + Sbjct: 252 LTAHSSDDDDRVYRDKEEVEEAKKKDSIITFAAYLKEAGVLTEEFEKQMLDEIMHIVNEA 311 Query: 344 VEFAQS 349 E+A++ Sbjct: 312 TEYAEN 317 >gi|228992907|ref|ZP_04152831.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus pseudomycoides DSM 12442] gi|228766764|gb|EEM15403.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus pseudomycoides DSM 12442] Length = 335 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 145/305 (47%), Gaps = 3/305 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ + YR MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 16 LSDEQVVEMYRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYA 74 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR+ G +LA G+ A ++M + G S G+ H KN G V QV Sbjct: 75 LPYYRDMGVVLAFGMTAKELMLSGFAKAGDPNSGGRQMPGHFGQKKNRIVTGSSPVTTQV 134 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 135 PHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAISI 194 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 V + A N S R + + +PG VDG D AV + +A R +GP +IE ++YR Sbjct: 195 PVEKQLACKNVSDRAIGYGMPGYTVDGNDPLAVYKAVKEAADCGRRGEGPTLIETVSYRL 254 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HS D +E E D I L +E K++ + I+N + Sbjct: 255 TAHSSDDDDRVYRDKEEVEEAKKKDSIFTFAAYLKEVGVLTEESEKQMLDEIMHIVNEAT 314 Query: 345 EFAQS 349 E+A++ Sbjct: 315 EYAEN 319 >gi|315282239|ref|ZP_07870692.1| 2-oxoisovalerate dehydrogenase subunit alpha [Listeria marthii FSL S4-120] gi|313614114|gb|EFR87805.1| 2-oxoisovalerate dehydrogenase subunit alpha [Listeria marthii FSL S4-120] Length = 331 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 153/310 (49%), Gaps = 9/310 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGH 114 Y ML+ RR +E+ L G + F GQE +G + + D + YR+ Sbjct: 17 YETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYALPYYRDLAV 75 Query: 115 ILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +LA G+ A IM + + S G+ H N V Q GI A Sbjct: 76 VLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLA 135 Query: 174 NKYRRSDKICV-VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 K DKI + G+G++NQG +E N A++ L V++VI NNQYA+ S+ A Sbjct: 136 AKMA-GDKIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQYAISVPASKQYAA 194 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-SMSD 291 S R + + IPG +VDG ++ V A +A R +GP +IE ++YR+ H S D Sbjct: 195 EKLSDRAIGYGIPGERVDGTNMGEVYAAFKRAADRARNGEGPTLIETVSYRFTPHSSDDD 254 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD- 350 ++YR+REE+NE + DP+ + LL + +E + EIE ++ K +N + ++A+S Sbjct: 255 DSSYRSREEVNEAKGK-DPLTIFQTELLEEGYLTEEKIAEIEKSIAKEVNEATDYAESAA 313 Query: 351 -KEPDPAELY 359 EP+ + LY Sbjct: 314 YAEPESSLLY 323 >gi|319653211|ref|ZP_08007313.1| pyruvate dehydrogenase E1 alpha subunit [Bacillus sp. 2_A_57_CT2] gi|317395132|gb|EFV75868.1| pyruvate dehydrogenase E1 alpha subunit [Bacillus sp. 2_A_57_CT2] Length = 355 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/309 (27%), Positives = 147/309 (47%), Gaps = 11/309 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+ IR F+ KA L G +G + GQEA VG +L E D M YR+HG Sbjct: 35 YRHMVRIRIFDRKAISLQRQGRIGTYAPYE-GQEASQVGTAAALRENDWMFPTYRDHGAA 93 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G I+ GR G G + + + Q+ G AFA + Sbjct: 94 MTFGHSLRNILLFWNGRNEGCVPPDGKKIFPPAIP---------IATQIPHAAGAAFAER 144 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + + + FGDGA ++G +E N A+++ V++ +NNQYA+ ++ Sbjct: 145 KKGTANAAIAYFGDGATSEGDFHEGLNFASVFKAPVVFFNQNNQYAISVPFNKQMNSKTI 204 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 +++ ++++IPG+++DG D+ V A+ R +GP +IE +T+RY H+ + DP+ Sbjct: 205 AQKALAYDIPGVRIDGNDVFMVYFETLNALERARKGEGPTLIEAVTWRYGAHTTADDPSK 264 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR + E + R DPI ++ + + + E ++ IE I+ ++ + D Sbjct: 265 YRDQSESSNRRQETDPILRLERWMKNMGRFDEKWVQTIEKKAADEIDKAIAEMEDFPPAD 324 Query: 355 PAELYSDIL 363 PA ++ + Sbjct: 325 PAVIFDHVF 333 >gi|315424984|dbj|BAJ46659.1| pyruvate dehydrogenase E1 component subunit alpha [Candidatus Caldiarchaeum subterraneum] Length = 341 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 91/318 (28%), Positives = 155/318 (48%), Gaps = 6/318 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E L YR M+L R F+ +L G V + GQEAV V + + D + Sbjct: 11 LSDELLLKMYREMVLARLFDSAMVKLQRAGKVAAYTS-SEGQEAVSVAAVNAASPLDWIF 69 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVS 165 YRE G +A GV ++A GR G KG + +F K G G V A + Sbjct: 70 PTYRETGAFIARGVPLETLIARQLGRVG--DPLKGHEVLLFGDKRYRIVTGPGPVAAHIP 127 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G +A + + D + +V FGDGA ++G +E N+A ++ +++ +NNQYA+ Sbjct: 128 VAVGFGYAARRKGEDCVMLVFFGDGATSKGDFHEGLNVAGVFKTPTVFICQNNQYAISVP 187 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + +A + + ++ G+ V+G +I + + +AV R +GP +IE +TYR Sbjct: 188 RHQQTASETIAVKAEAYGFEGVTVNGNNIEEMYKIVSRAVEKARNGEGPTLIEAITYRLA 247 Query: 286 GHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HS + DP YRT +E+ EM + DPI RK L+ S+ ++ ++R+++ + Sbjct: 248 AHSTADDPTKYRTVQEV-EMWRSQDPITICRKLLIEKNLLSDEKDNQLWTSLRQMLEQKI 306 Query: 345 EFAQSDKEPDPAELYSDI 362 E + P ++ D+ Sbjct: 307 EEVEKTPIIPPMSIFEDV 324 >gi|291320031|ref|YP_003515289.1| pyruvate dehydrogenase E1 component, subunit alpha [Mycoplasma agalactiae] gi|290752360|emb|CBH40331.1| Pyruvate dehydrogenase E1 component, alpha subunit [Mycoplasma agalactiae] Length = 363 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/298 (28%), Positives = 155/298 (52%), Gaps = 13/298 (4%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 VD ++ ++ S K++ + Y+ M+ R+++ + L G +G F +G+EA + Sbjct: 24 VDGKLIQEYKPSAETKKKLVEMYKNMIRSRQWDLYSLTLQKTGRLGTFAP-ALGEEAALT 82 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G+ +L + D I YR LA G+ KI + G + G + ++ + Sbjct: 83 GIGFNLNKEDWFIPHYRVLPTQLARGISMDKIYSYWQGSEIGSAFAGTNTLPI------- 135 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 H ++G+QV + G+A A KY+ + +V G+G N+G+ +E N+A++ ++ Sbjct: 136 ---HVVIGSQVPIAAGVAQALKYQGKKALAMVTIGNGGTNEGEFHEGLNMASVRKWPLVT 192 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 V+ NNQ+A+ + S+R S+++PG++VDG D+ AV M++ Y R G Sbjct: 193 VVMNNQWAISVPEHNSYIVKTLSQRAKSYDMPGVRVDGNDLIAVNEVMEEVYDYVREGNG 252 Query: 274 PIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 P+++EM+T+R H+ SD P YR+R E+ + +P ++ LL K +E D+K Sbjct: 253 PVLVEMVTWRQGQHTTSDNPRVYRSR-ELEMEKEKWEPFHRIEAYLLSEKLITEEDIK 309 >gi|55377075|ref|YP_134925.1| pyruvate dehydrogenase E1 component subunit alpha [Haloarcula marismortui ATCC 43049] gi|55229800|gb|AAV45219.1| pyruvate dehydrogenase E1 component alpha subunit [Haloarcula marismortui ATCC 43049] Length = 370 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 90/324 (27%), Positives = 162/324 (50%), Gaps = 18/324 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + E +S YR M RRF+E+ L G +G + L GQE VG +L + D Sbjct: 29 IPDLSDEALVSMYRDMRFARRFDERMISLQRQGRLGTYSSLA-GQEGSQVGSTYALADED 87 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YREHG ++A G+ ++ + G + G G +++F +GA Sbjct: 88 TIFYQYREHGALVARGLPWEYVLYWM-GHEAG--NAALGDVNVFPLNIS-------IGAH 137 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G ++A K R ++ VV FGDGA ++G +E+ N A ++ ++ NNQ+A+ Sbjct: 138 LPHAVGWSWAAKKRGDERAGVVHFGDGATSEGDFHEAMNFAGVFETPTVFFCNNNQWAIS 197 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA----VKATMDKAVAYCRAHKGPIIIEM 279 R +A +++ ++ G+QVDGMD A +A ++AV + PI IE Sbjct: 198 VPRERQTASQTLAQKADAYGFDGVQVDGMDPLATYSVTEAARERAVGANGGEQEPIFIEA 257 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + YR+ H+ + DP YR E+ E R DP++++ L + +G + ++ + + Sbjct: 258 VQYRFGAHTTADDPDVYRDDAEVEEWRE-RDPLDRMEAFLRNCNLLDDGKIDVMDDTIDE 316 Query: 339 IINNSVEFAQSDKEPDPAELYSDI 362 + ++ A+S PDP +L++D+ Sbjct: 317 RLGEIIDNAES-HAPDPTDLFTDV 339 >gi|169828954|ref|YP_001699112.1| 2-oxoisovalerate dehydrogenase subunit alpha [Lysinibacillus sphaericus C3-41] gi|168993442|gb|ACA40982.1| 2-oxoisovalerate dehydrogenase subunit alpha [Lysinibacillus sphaericus C3-41] Length = 338 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 148/314 (47%), Gaps = 5/314 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + E L+ + ML+ RR +E+ L G + F C GQEA VG +L + D + Sbjct: 13 LSNEDVLAMFETMLMARRLDERMWLLNRSGKIP-FVISCQGQEAAQVGAAFALNKDKDYI 71 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 YR+ G +L G+ ++M + + S G+ H KN G V QV Sbjct: 72 APYYRDMGVVLHFGMTPRELMLSAFAKAEDPNSGGRQMPGHFGQKKNRILTGSSPVTTQV 131 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G+A A + + D + V G+G++NQG +E N A + L VI ++ENNQYA+ Sbjct: 132 PHAVGVALAGRLQNEDFVSFVTLGEGSSNQGDFHEGANFAGVHKLPVIIMVENNQYAISV 191 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 V R S RG+ + +PG+ VDG V + +A R +GP +IE +TYR Sbjct: 192 PVERQLGCAKVSDRGIGYGMPGVTVDGKCPLQVYKVVKEAADRARNGEGPSLIETVTYRL 251 Query: 285 RGHSM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D YRT E+I E ++ DPI K L +E EIE V +N + Sbjct: 252 TAHSSDDDDRQYRTAEDIAEGKAK-DPIVLFEKYLTDAGVMTEKVRTEIEERVMAEVNEA 310 Query: 344 VEFAQSDKEPDPAE 357 ++A++ P + Sbjct: 311 TDYAEAAPYAQPED 324 >gi|91793142|ref|YP_562793.1| 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) [Shewanella denitrificans OS217] gi|91715144|gb|ABE55070.1| 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) [Shewanella denitrificans OS217] Length = 392 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 80/284 (28%), Positives = 146/284 (51%), Gaps = 4/284 (1%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA ++G +L + D ++ YREH + G + M ++ + + KG+ Sbjct: 78 FYMTCTGEEAAVIGSAAALDDEDVILAQYREHAALRYRGFTTEQFMNQMFSNEKDLGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + + Q+ TG+ ++ K ++ + + FG+GAA++G + Sbjct: 138 QMPIHYGSKALHYQTVSSPLATQIPQATGVGYSLKLQKKHNVAICYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ I+ NN YA+ T A + RGV + + ++VDG D+ AV A Sbjct: 198 MNMAAVLKSPTIFFCRNNGYAISTPTEEQYAGNGIASRGVGYGMHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A A+ A+ P++IE +TYR HS S DP+ YR++EE + + HDP+++ + ++ Sbjct: 258 TQQARAFALANNAPVLIEAMTYRLGAHSSSDDPSGYRSKEEEAKWK-QHDPVQRFKLWMI 316 Query: 320 HNKWASE-GDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + W +E D+K E R+ + +V+ A+ P E+ D+ Sbjct: 317 NKGWINEAADVKMYE-KYREEVLAAVKVAEKIPVPHLDEIIEDV 359 >gi|332969912|gb|EGK08914.1| pyruvate dehydrogenase complex E1 component alpha subunit [Desmospora sp. 8437] Length = 361 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 87/282 (30%), Positives = 145/282 (51%), Gaps = 12/282 (4%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 +EG + + + ++ YR ML +R ++ +A +L G +G + + GQEA + + Sbjct: 24 IEGQQAPDLSDDELKKIYRWMLRVRAYDGRAIKLNRQGRLGFYAPMA-GQEACQIASMAA 82 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L D + +YR+ G + G+ S MA L S+G+ M + N F Sbjct: 83 LKRSDWLFPSYRDVGASMFHGM--SMEMAFL------YSRGQIDGMKIPEDVNMF-PPQI 133 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 I+ AQV G +A + R +++ + FGDGA ++G +E N A +++ N I+ +NN Sbjct: 134 IIAAQVLHAAGAGWAYRLRDENRVAIAFFGDGATSEGDFHEGLNFAGVYDSNSIFFCQNN 193 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 QYA+ S+ + +++ V++ I G++VDG D AV +A R +GP +IE Sbjct: 194 QYAISVPFSKQTKAETIAQKAVAYGITGVRVDGNDALAVYQVTKEAADRARKGEGPTLIE 253 Query: 279 MLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +TYR H+M+ DP YRT+EE S DP+ + RK L Sbjct: 254 AVTYRVGPHTMAGDDPGRYRTKEEEESWTSKRDPLNRFRKYL 295 >gi|167541056|gb|ABZ82038.1| pyruvate dehydrogenase a-chain type 1 [Clonorchis sinensis] Length = 199 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/170 (44%), Positives = 108/170 (63%), Gaps = 11/170 (6%) Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 GAANQGQV+E+FN+A LW L VI++ ENN+Y MGT+ R+SA ++ R IPG V Sbjct: 9 GAANQGQVFEAFNLAKLWKLPVIFLCENNKYGMGTADCRSSASIDYYTRASY--IPGSWV 66 Query: 250 DGMDIRAVKATMDKAVAYCR----AHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEM 304 +GMDI AV+ +A+ +CR A GPI+ E TYRY GHSMSDP +YRTR+EI+ + Sbjct: 67 NGMDILAVR----EAIRFCRNWIMAGNGPIVFEAETYRYFGHSMSDPGTSYRTRDEIDLV 122 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 R DPI + ++ ++ ++KEI V+K + + A++ EPD Sbjct: 123 RKQRDPINLFSQSVISAGLLTDAEVKEINAIVKKEVAQDRDQAETSPEPD 172 >gi|227535069|ref|ZP_03965118.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187284|gb|EEI67351.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 334 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 90/317 (28%), Positives = 155/317 (48%), Gaps = 9/317 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT---EGD 103 ++E L Y+ ++ RR +E+ L+ + +G F GQ A + M+L + D Sbjct: 15 LSRETILDVYKAVMRGRRVDER---LWQLTRIGKFSFNISGQGAEVGQAAMALAFDYDKD 71 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGG-ISKGKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ +L G+ IM G++ S G+ H S + V Sbjct: 72 YFLPYYRDLTAVLMWGMTTKDIMLAGFGKEADPASHGRQMPSHYGSKAHNIVSHSSPVST 131 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q + GIA+ + R D + VV GDG+ +QG+ E+ NIA + + V++V+ENN YA+ Sbjct: 132 QYPISAGIAYGAQMRGEDYVTVVTTGDGSFSQGECAEAMNIAGVHKMPVVFVVENNGYAI 191 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 A + RG +F G++V+G D +AV R GP +IE++ Sbjct: 192 SVPDKEQYAVEKLADRGPAFGFNGIRVNGSDFAETYLAFKQAVTDARQGNGPTLIEIMVE 251 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D YR+ EE+ E++ N DP++ +++L+ + +E D+ IE + IN Sbjct: 252 RLTSHSSDDDQRVYRSAEELAEIKEN-DPVKLFQQQLIDEGYLNEADIDRIEKELETEIN 310 Query: 342 NSVEFAQSDKEPDPAEL 358 + + A++ +PDPA++ Sbjct: 311 QATDEAEAMPDPDPAKI 327 >gi|222479166|ref|YP_002565403.1| dehydrogenase E1 component [Halorubrum lacusprofundi ATCC 49239] gi|222452068|gb|ACM56333.1| dehydrogenase E1 component [Halorubrum lacusprofundi ATCC 49239] Length = 382 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 89/326 (27%), Positives = 160/326 (49%), Gaps = 22/326 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + E+ + YR ++ RRF+E+A L G +G + C GQE VG +L + D Sbjct: 37 VPDLSDERFRAIYRDLVTTRRFDERAVSLQRQGRIGTYA-PCAGQEGSAVGSTHALADRD 95 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YREHG I+ + S+ + G + G G++ F G + A Sbjct: 96 LISYQYREHGAIVVRDL-LSEYLPYWLGHESGTEAIADGNV--FPLNIG-------IAAH 145 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G A+A YR D++ FG GA ++G +E+ N A +++ ++ NN +A+ Sbjct: 146 LPHAVGAAWAFDYREEDRVVAAHFGGGATSEGDFHEAMNFAGVFDTPTLFCCHNNGWAIS 205 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--------PI 275 SR +A F+++ ++ G++VDGMD A A +A R ++ P Sbjct: 206 IPESRQTASDTFAEKAGAYGFEGIRVDGMDPLASYAVTKEAADRARRNEDDSPVDAPRPA 265 Query: 276 IIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 +IE L YR+ H+ + DP YR + ++ R+ DP++++ L + + I Sbjct: 266 LIEFLEYRFGAHTTADDPTAYRDPDAVDPWRA-LDPLDRMEAFLRETGRIDDDGVAAIHE 324 Query: 335 NVRKIINNSVEFAQSDKEPDPAELYS 360 +I+ ++++FA+S EPDPA+++ Sbjct: 325 EADEIVADAIDFAES-VEPDPADMFD 349 >gi|320333705|ref|YP_004170416.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Deinococcus maricopensis DSM 21211] gi|319754994|gb|ADV66751.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Deinococcus maricopensis DSM 21211] Length = 352 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 91/309 (29%), Positives = 147/309 (47%), Gaps = 12/309 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M IR F+E+A L+ G +G F G EA G ++LT D ++ YR+ G Sbjct: 35 YRAMRRIRHFDERAVVLHRQGRMGVFPPYG-GMEASQAGTALALTPEDWLLPTYRDTGAA 93 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G+ S +A + G +M FY + Q G A A Sbjct: 94 LAYGLPVSTTVAYWR------TSPHGWAMPEHLKVLPFYIP---IATQYPHAVGCAVAEA 144 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + + + + GDG +++GQ +E+ N A N +++++NN +A+ + TN Sbjct: 145 RQGTQNVAMAYIGDGGSSEGQFHEALNFAGALNAPCVFILQNNGWAISVPTRTQTRATNL 204 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 SKR + IPG++VDG DI AV +AVA R +GP +IE +TYR + H++S DP+ Sbjct: 205 SKRADGYGIPGVRVDGNDIIAVYHAASEAVARARRSEGPTLIETVTYRVKPHTVSDDPSR 264 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT + E + DP+ ++ L K + ++ + + +V A + EP Sbjct: 265 YRTEDLTREWEAK-DPVVRLAAYLRAQKLWDDAHEDALQSEIVEEFEAAVREADTYPEPS 323 Query: 355 PAELYSDIL 363 P E+ + Sbjct: 324 PTEILDHVF 332 >gi|302848378|ref|XP_002955721.1| hypothetical protein VOLCADRAFT_42256 [Volvox carteri f. nagariensis] gi|300258914|gb|EFJ43146.1| hypothetical protein VOLCADRAFT_42256 [Volvox carteri f. nagariensis] Length = 391 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 85/283 (30%), Positives = 139/283 (49%), Gaps = 2/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA +G L D + YRE G ++ G + +L G KG+ Sbjct: 82 FYLTCQGEEATNIGSAAGLDGKDMVFAQYREQGVLMWRGFTLEQFANQLLGNSLEPGKGR 141 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S ++ + + Q+ G A+A K R ++ VV FGDGA+++G + + Sbjct: 142 QMPIHYGSPEHAYQTISSPLATQMPHAVGAAYAYKMDRVQQVAVVYFGDGASSEGDAHAA 201 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN AA+ VI++ NN YA+ T + RG + IP ++VDG D+RAV Sbjct: 202 FNFAAVLGAPVIFICRNNGYAISTPAHEQYKGDGIAGRGPMYGIPTLRVDGGDVRAVYNA 261 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A A + GP++IE ++YR HS SD + YRT EE+ R+ DP+ + R L+ Sbjct: 262 VVAARARALSGTGPVLIECMSYRSGHHSTSDDSTRYRTSEEMRAWRAR-DPVARFRTWLV 320 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 W E + N R + +++ A +P+ + L++D+ Sbjct: 321 RRGWWDEAQEAALRRNTRVQVLEALDAAAKVPKPELSSLFTDV 363 >gi|163941912|ref|YP_001646796.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Bacillus weihenstephanensis KBAB4] gi|229061844|ref|ZP_04199175.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus AH603] gi|229134976|ref|ZP_04263782.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus BDRD-ST196] gi|163864109|gb|ABY45168.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Bacillus weihenstephanensis KBAB4] gi|228648478|gb|EEL04507.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus BDRD-ST196] gi|228717453|gb|EEL69120.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus cereus AH603] Length = 333 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 88/248 (35%), Positives = 125/248 (50%), Gaps = 5/248 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ L +R MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 14 LSDEQVLEMFRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYA 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A ++M + G + G G M H KN G V Q Sbjct: 73 LPYYRDMGVVLAFGMTAKELMLSAFAKAGDPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQ 131 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 132 VPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 191 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + A N S R + + +PG +DG D AV + +A R +GP +IE ++YR Sbjct: 192 IPVEKQLACKNVSDRAIGYGMPGYTIDGNDPLAVYKAVKEAADRGRRGEGPTLIEAVSYR 251 Query: 284 YRGHSMSD 291 HS D Sbjct: 252 LTAHSSDD 259 >gi|253576720|ref|ZP_04854047.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Paenibacillus sp. oral taxon 786 str. D14] gi|251843930|gb|EES71951.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Paenibacillus sp. oral taxon 786 str. D14] Length = 358 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 89/294 (30%), Positives = 156/294 (53%), Gaps = 13/294 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+ R ++E+A L G +G + + GQEA +VG + +L + D + YR+ + Sbjct: 47 YR-MVFTRTWDERAINLGRQGRLGFYAPVS-GQEATMVGSEFALDKQDFICPGYRDMPQL 104 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G+ + G Q G +G ++ M I+GAQV GIA K Sbjct: 105 VWHGLPLYQAFLYSRGHQHGGQIPEGVNVLMPQI---------IIGAQVLHAMGIAMGYK 155 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 ++ ++ + GDG +++G YE+ N A ++ L VI+ ++NN YA+ T S+ +A + Sbjct: 156 LKKQKQVVITYTGDGGSSEGDFYEALNYAGVFKLPVIFFVQNNGYAITTPFSKQTAALSI 215 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + + V+ I G+++DGMD+ AV + + +A R +G +IE +TYR+R HS+S D + Sbjct: 216 AHKAVAAGIRGVKIDGMDVFAVISAVREAAERARNGEGATLIEAVTYRFRPHSLSDDTSK 275 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 YRT+EE + S DPI ++ K L +E D ++ + +N ++ A+ Sbjct: 276 YRTKEEEGQW-SEKDPIARLAKYLEKKGLWTEEDTARVKEEAKAKVNEHIKKAE 328 >gi|301062036|ref|ZP_07202747.1| pyruvate dehydrogenase E1 component, alpha subunit [delta proteobacterium NaphS2] gi|300443887|gb|EFK07941.1| pyruvate dehydrogenase E1 component, alpha subunit [delta proteobacterium NaphS2] Length = 367 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 99/324 (30%), Positives = 162/324 (50%), Gaps = 31/324 (9%) Query: 43 EVSEFNKEQE--------LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG 94 E E +KE E L YR M+L R+F+++ L G +G F + GQEA +G Sbjct: 9 EEGELDKELEPEIPEDLLLKLYRFMVLGRKFDDRLLSLQRQGRMGTFAPIS-GQEAAHLG 67 Query: 95 MKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 L D + ++RE G L G ++ G G S N Sbjct: 68 AVALLRPSDWFVPSFRETGAELWRGRSMESVIL-----------GFAGYAEAASVDNVGE 116 Query: 155 GGHGI---------VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 GHG V +QV GIA+ +YR+ D + + FGDG ++G +E N A Sbjct: 117 DGHGPMNNMPVSIPVASQVLHAVGIAWGMRYRKKDDVAMAFFGDGGTSEGDFHEGLNFAG 176 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 ++ VI+V +NN +A+ T + + +++ +++ +PG+QVDG D+ AV A ++AV Sbjct: 177 VYQCPVIFVCQNNHWAISTPREKQTRSKTLAQKALAYGMPGIQVDGNDVLAVYAAAEEAV 236 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 A R+ +GP +IE +TYR + H+ + DP YR EE+ + DPI + RK L Sbjct: 237 ARARSGEGPSMIECITYRMKMHTTADDPKRYRKEEEVAAWQ-GRDPIPRFRKYLTDKGLL 295 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQ 348 S+ ++E+E ++ + I ++V+ A+ Sbjct: 296 SDDKIQEMESDIEEEIKSAVKRAE 319 >gi|194016754|ref|ZP_03055367.1| 2-oxoisovalerate dehydrogenase subunit alpha (branched-chain alpha-keto acid dehydrogenase e1 component alpha chain) (bckdhe1-alpha) [Bacillus pumilus ATCC 7061] gi|194011360|gb|EDW20929.1| 2-oxoisovalerate dehydrogenase subunit alpha (branched-chain alpha-keto acid dehydrogenase e1 component alpha chain) (bckdhe1-alpha) [Bacillus pumilus ATCC 7061] Length = 330 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 152/307 (49%), Gaps = 7/307 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ + YR MLL R+ +E+ L G + F C GQEA VG +L E D + Sbjct: 11 LSDEQAIDIYRTMLLARKIDERMWLLNRSGKIP-FVISCQGQEAQQVGAAFALNREEDYV 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A +M +Q S G G M H N G V Q Sbjct: 70 LPYYRDMGVVLAFGMTAKDLMMSGFAKQDDPSSG-GRQMPGHFGQKSNRIVTGSSPVTTQ 128 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A + + + + V FG+G++NQG +E N AA+ L VI++ ENN+YA+ Sbjct: 129 VPHAVGIALAGRLDQKNFVSFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAIS 188 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + A S R + + +PG+ VDG D V A + +A +GP +IE ++YR Sbjct: 189 VPYDKQVACERISDRAIGYGMPGVTVDGNDPLEVYAAVKEARDRAAKGEGPTLIETISYR 248 Query: 284 YRGH-SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H S D ++YR +EE+ E R DP+ Q L + +E+ + +I+N Sbjct: 249 LTAHSSDDDDSSYREKEEVLEARKK-DPLIQYETYLTEGNIMTSEMKEEMTKEIMQIVNE 307 Query: 343 SVEFAQS 349 + + A++ Sbjct: 308 ATDEAEN 314 >gi|255558474|ref|XP_002520262.1| 2-oxoisovalerate dehydrogenase, putative [Ricinus communis] gi|223540481|gb|EEF42048.1| 2-oxoisovalerate dehydrogenase, putative [Ricinus communis] Length = 380 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 82/326 (25%), Positives = 160/326 (49%), Gaps = 2/326 (0%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 +E + E +KE + Y M+ ++ + + G + F IG+E++ + Sbjct: 24 LIENSDFDEVSKEIAVKMYNEMVTLQMMDTIFYEAQRQGRIS-FYVTSIGEESINIASAA 82 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +LT+ D ++ YRE G +L G + + G + +G+ +H S K+ ++ Sbjct: 83 ALTKDDVVLPQYREPGVLLWRGFTLQEFANQCFGNKADYGRGRQMPIHYGSNKHNYFTVS 142 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + Q+ G+A++ K + D V GDG ++G + + N AA+ VI++ N Sbjct: 143 SPIATQLPQAVGVAYSLKMEKKDACVVTYIGDGGTSEGDFHAALNFAAVTEAPVIFICRN 202 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N +A+ T +S +G ++ I ++VDG D AV T+ A + + P+++ Sbjct: 203 NGWAISTHISEQFRSDGIVVKGKAYGIQSIRVDGNDALAVYRTIRAARQIAVSEQRPVLV 262 Query: 278 EMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E LTYR HS SD + YR +EI + +P+ + RK + N W S+ + E+ +V Sbjct: 263 EALTYRVGHHSTSDDSTKYRPADEIEYWKMARNPVNRFRKWVERNGWWSDKEESELRSSV 322 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDI 362 RK + +++ A+ ++P ++++D+ Sbjct: 323 RKQLLQAIQVAEKTEKPPLGDMFTDV 348 >gi|13540933|ref|NP_110621.1| branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit [Thermoplasma volcanium GSS1] gi|14324315|dbj|BAB59243.1| 2-oxoisovalerate dehydrogenase alpha subunit [Thermoplasma volcanium GSS1] Length = 337 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 91/305 (29%), Positives = 151/305 (49%), Gaps = 6/305 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+L R F++K G+VG F +GQEA G M+L++ D + YR+ ++ Sbjct: 20 MVLGRLFDKKVITAQRQGLVG-FYTPMMGQEATQAGAAMALSKQDLVYGYYRDVTLLIYL 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G KI ++ G SKG+ H + F V + L G A+A KYR+ Sbjct: 79 GYPIEKIFDQIMGNAEDTSKGRQMPSHYSAKAVNFMSVPSPVATNLPLAVGAAYAKKYRK 138 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 D I + FGDG + + + N A++++L V+++ ENN +A+ V R + + K+ Sbjct: 139 EDGIVITSFGDGGTSTPDFHAAMNFASVYDLPVVFLCENNGWAISFPVERQT-KAEIYKK 197 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRT 297 ++ + G+ VDG D + +AV Y R+ PI++E +YR HS S DP+ YR Sbjct: 198 AEAYGMKGVYVDGNDFIKTYNAVKEAVEYARSG-NPILVEARSYRMGPHSTSDDPSKYR- 255 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 + E+ E N DP+ K ++ S+ ++ I+ RK+I+ E PDP+ Sbjct: 256 QNEVKEGDEN-DPLVIAEKAVISKGILSQSEVNRIKDESRKMIDEKFEERLKIPAPDPST 314 Query: 358 LYSDI 362 L+ D+ Sbjct: 315 LFDDV 319 >gi|329922000|ref|ZP_08277807.1| pyruvate dehydrogenase E1 component, alpha subunit [Paenibacillus sp. HGF5] gi|328942460|gb|EGG38723.1| pyruvate dehydrogenase E1 component, alpha subunit [Paenibacillus sp. HGF5] Length = 367 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 98/337 (29%), Positives = 166/337 (49%), Gaps = 13/337 (3%) Query: 14 KMALNP-SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQL 72 KM P V + T SV D + + E + +Q M+ R ++++A L Sbjct: 12 KMTKVPYEVYTEEVGTLSVLSPDGKIVNKDLLPELSDDQLKEIMYRMVFTRTWDDRAVNL 71 Query: 73 YGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR 132 G +G + + GQEA +VG + +L + D + YR+ I+ G+ + G Sbjct: 72 GRQGRLGFYAPVS-GQEATMVGSEFALEKDDFICPGYRDMPQIVWHGLPLYQAFLYSRGH 130 Query: 133 QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAA 192 Q G +G ++ M I+GAQ+ GIA K ++ ++ + GDG + Sbjct: 131 QHGGQIPEGVNVLMPQI---------IIGAQILHAMGIAMGYKLKKQKQVVITYTGDGGS 181 Query: 193 NQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 ++G YE N A ++ L VI+ ++NN YA+ T S+ +A + + + V+ I G++VDGM Sbjct: 182 SEGDFYEGLNYAGVYKLPVIFFVQNNGYAITTPFSKQTAALSIAHKAVAAGIKGVKVDGM 241 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPI 311 D+ AV + A R +G +IE +TYR+R HS+SD A YRT+EE E + DPI Sbjct: 242 DVLAVIKAVQDAAERGRNGEGATLIEAVTYRFRPHSLSDDATKYRTKEEEGEW-NEKDPI 300 Query: 312 EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++ K L +E D ++ + +N ++ A+ Sbjct: 301 ARLAKYLEAKGLWTEEDTARVKEEAKAKVNEQIKKAE 337 >gi|310822118|ref|YP_003954476.1| 3-methyl-2-oxobutanoate dehydrogenase [Stigmatella aurantiaca DW4/3-1] gi|309395190|gb|ADO72649.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Stigmatella aurantiaca DW4/3-1] Length = 347 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 87/279 (31%), Positives = 138/279 (49%), Gaps = 3/279 (1%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 FE SE + Q ++ YR ML R +E+ L G VG F +GQEA + +L Sbjct: 4 FEPSELTEAQLVAVYRAMLQSRLMDERMVSLQRQGRVG-FYGTGMGQEATCIASAFALRP 62 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D + RE+ +L G +A+L G G +KG+ H FS + +G Sbjct: 63 TDWLFPGLRENAAMLLRGYPLVPYLAQLFGNSGDEAKGRQMPAHQFSRRVNQVSWSSCIG 122 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ G A+A + + D + + C GDGA + G + + N A + +++ +NN ++ Sbjct: 123 TQLPQAVGAAWAARRKGHDTVVLACLGDGATSTGDFHAAMNFAGVLQAPAVFLCQNNHWS 182 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + +S+ + + + ++ PG++VDG D AV A AVA RA GP IE +T Sbjct: 183 ISLHISQQTKSETLALKASAYGFPGVRVDGNDAEAVYAATSSAVARARAGAGPSFIEAVT 242 Query: 282 YRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 YR HS S DP Y+ E+ R+ DP+E++R RL+ Sbjct: 243 YRVGPHSSSDDPTLYQDAREVEAWRAK-DPLERLRARLI 280 >gi|109898353|ref|YP_661608.1| 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) [Pseudoalteromonas atlantica T6c] gi|109700634|gb|ABG40554.1| 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) [Pseudoalteromonas atlantica T6c] Length = 398 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 91/340 (26%), Positives = 159/340 (46%), Gaps = 13/340 (3%) Query: 34 VDIPFLEGF----------EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCH 83 VDIP L+ ++ E +KE L +R M IR +E+ G + F Sbjct: 25 VDIPMLQILRPDGSVHSDADMPEIHKEAALKIFRTMHYIRVLDERMVGAQRQGRIS-FYL 83 Query: 84 LCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGS 143 C G+EA +G +L++ D +++ YRE G + G + M ++ + +KG+ Sbjct: 84 ACSGEEASTIGSAAALSDSDMIMSQYREQGALAYRGYRTEQFMNQMFSNKLDPNKGRQMP 143 Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 +H F +G Q+ G A+ K ++ + + FG+GAA++G + N+ Sbjct: 144 IHYGDKALNFMTISSPLGTQIPQAAGYAYGQKMAGNEALTICYFGEGAASEGDFHAGLNM 203 Query: 204 AALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 A++ N VI+ NN YA+ T + + + RG+ + I ++VDG D+ AV K Sbjct: 204 ASVLNCPVIFFCRNNGYAISTPANEQFSGDGIASRGLGYGIKTIRVDGNDVLAVYLATQK 263 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 A P++IE +TYR HS S DP YR++EE + R DP+++ + Sbjct: 264 AREIALKEHCPVLIEAMTYRLAAHSTSDDPTGYRSKEEEQKWREK-DPVQRFENWMKSKD 322 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 W E K+ R+ + +++ A+ D +L +D+ Sbjct: 323 WIDEAQHKQFVEQTRQDVLAAMKKAEQVDICDIDDLINDV 362 >gi|284034724|ref|YP_003384655.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Kribbella flavida DSM 17836] gi|283814017|gb|ADB35856.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Kribbella flavida DSM 17836] Length = 391 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 86/291 (29%), Positives = 141/291 (48%), Gaps = 19/291 (6%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M ++RR + +A L G +G + L +GQEA +G +L D + YREHG Sbjct: 60 YRDMTIVRRIDTEATALQRQGELGLWASL-LGQEAAQIGSGRALNAKDMVFPTYREHGVA 118 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GVD ++ G G + + H+++ ++GAQ TG A + Sbjct: 119 YCQGVDPLNLLGLFRGVDQGAWDPRDNNFHLYTI---------VIGAQTLHATGYAMGQQ 169 Query: 176 YRR------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 + + + FGDGA++QG V E+F A+++N V++ +NNQ+A+ + R Sbjct: 170 RDHAVGDPDTGEATIAYFGDGASSQGDVNEAFIYASVFNAPVVFFCQNNQWAISEPIDRQ 229 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + +R F PG++VDG D+ A A +A+ R GP ++E TYR H+ Sbjct: 230 T-RIPLYQRAAGFGFPGVRVDGNDVLATYAVTQQALKRAREGSGPTLVEAYTYRMGAHTT 288 Query: 290 S-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 S DP YR E++ E DPIE+V+ L + + E+E ++ Sbjct: 289 SDDPTKYRLSEDL-EYWKLKDPIERVKAYLARSAGVGQDFFAEVEAEADQV 338 >gi|270156700|ref|ZP_06185357.1| pyruvate dehydrogenase E1 component alpha subunit [Legionella longbeachae D-4968] gi|289164853|ref|YP_003454991.1| pyruvate dehydrogenase E1 alpha subunit [Legionella longbeachae NSW150] gi|269988725|gb|EEZ94979.1| pyruvate dehydrogenase E1 component alpha subunit [Legionella longbeachae D-4968] gi|288858026|emb|CBJ11886.1| pyruvate dehydrogenase E1 alpha subunit [Legionella longbeachae NSW150] Length = 357 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 86/310 (27%), Positives = 157/310 (50%), Gaps = 22/310 (7%) Query: 43 EVSEFNKEQEL--SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 ++ +F K+ + Y++M+L R F++KA L G +G + + GQEA+ + ++ Sbjct: 24 QLPDFAKDHTVLKELYKMMVLTRTFDKKAIALQRTGKMGTYAPIN-GQEAISTAIGHAMR 82 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D + YR++ GV S+I+A G + G FS + + Sbjct: 83 PEDVFVPYYRDYAAQFQRGVKMSEILAFWGGDERG---------SQFSCNSEDLPICVPI 133 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 +Q TGIAFA +YR ++ VVC G+G ++G YE+ NIA W L V++V+ NNQ+ Sbjct: 134 ASQCLHATGIAFAFQYRNQSRVAVVCLGEGGTSEGDFYEAINIAGTWKLPVVFVVNNNQW 193 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ + + +++ ++ G+QVDG DI A + + A+ R +GP +IE L Sbjct: 194 AISVPREKQTGTQTIAQKAIAAGFSGIQVDGNDILATRQIIGDAIENARQGEGPTLIEAL 253 Query: 281 TYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGD-------LKE 331 +YR H+ +D A Y+ ++ + + +PI + ++ L+ K W ++ + +E Sbjct: 254 SYRLSDHTTADDATRYQPSADVEKAKPK-EPIARFKEFLMEQKIWNAQDEENLVIQCSEE 312 Query: 332 IEMNVRKIIN 341 +E V + +N Sbjct: 313 VEKAVSEYLN 322 >gi|71281526|ref|YP_268324.1| 2-oxoisovalerate dehydrogenase complex, E1 component subunit alpha [Colwellia psychrerythraea 34H] gi|71147266|gb|AAZ27739.1| 2-oxoisovalerate dehydrogenase complex, E1 component, alpha subunit [Colwellia psychrerythraea 34H] Length = 393 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 85/283 (30%), Positives = 138/283 (48%), Gaps = 2/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA VG L D ++ YRE G ++ G D +M +L G + KG+ Sbjct: 79 FYMTALGEEATSVGGAAGLKPQDMIMMQYREQGALIYRGFDLKDLMNQLFSNAGDLGKGR 138 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + Q+ TG A+ K + D + + FG+GAA++G + Sbjct: 139 QMPIHYGSKALNCMTVSSPLATQIPQATGYAYGQKLQGVDAVTICYFGEGAASEGDFHAG 198 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ VI+ NN YA+ T + RGV + I +++DG DI AV Sbjct: 199 LNMAAVQEAPVIFFCRNNGYAISTPSDEQFKGNGIASRGVGYGIKTIRIDGNDILAVLKA 258 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 A AY P++IE ++YR HS S DP+ YRT+EE + +S HDPI +++ L+ Sbjct: 259 TQIARAYAIKENKPVLIEAMSYRLGAHSTSDDPSGYRTKEEEAKWQS-HDPILRMKNWLI 317 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + KW E + R+ + +V+ A+ +P + +D+ Sbjct: 318 NQKWWDEARETALFEKYREEVLAAVKVAEKIDKPHIDTMITDV 360 >gi|46907598|ref|YP_013987.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Listeria monocytogenes serotype 4b str. F2365] gi|226223973|ref|YP_002758080.1| branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit) [Listeria monocytogenes Clip81459] gi|46880866|gb|AAT04164.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Listeria monocytogenes serotype 4b str. F2365] gi|225876435|emb|CAS05144.1| Putative branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit) [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 331 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 94/309 (30%), Positives = 152/309 (49%), Gaps = 7/309 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGH 114 Y+ ML+ RR +E+ L G + F GQE +G + + D + YR+ Sbjct: 17 YKTMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYALPYYRDLAV 75 Query: 115 ILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +LA G+ A IM + + S G+ H N V Q GI A Sbjct: 76 VLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLA 135 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K + G+G++NQG +E N A++ L V++VI NNQYA+ S+ A Sbjct: 136 AKMAGDEIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQYAISVPASKQYAAE 195 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-SMSDP 292 S R + + IPG +VDG ++ V A +A R +GP +IE ++YR+ H S D Sbjct: 196 KLSDRAIGYGIPGERVDGTNMGEVYAAFKRAADRARNGEGPTLIETVSYRFTPHSSDDDD 255 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD-- 350 ++YR+REE++E + DP++ + LL + +E + EIE ++ K +N + ++A+S Sbjct: 256 SSYRSREEVDEAKGK-DPLKIFQAELLEEGYLTEEKIAEIEKSIAKEVNEATDYAESAAY 314 Query: 351 KEPDPAELY 359 EP+ + LY Sbjct: 315 AEPESSLLY 323 >gi|169334743|ref|ZP_02861936.1| hypothetical protein ANASTE_01149 [Anaerofustis stercorihominis DSM 17244] gi|169257481|gb|EDS71447.1| hypothetical protein ANASTE_01149 [Anaerofustis stercorihominis DSM 17244] Length = 820 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 112/370 (30%), Positives = 159/370 (42%), Gaps = 67/370 (18%) Query: 44 VSEFNKEQELSAYRLMLLIRRFE------EKAGQLYGMGMVG-GFCHLCIGQEAVIVGMK 96 EF+K+ YR M IR FE + GM G HL IGQEA VG Sbjct: 36 TDEFSKDDFKRIYRDMWYIREFETMLNLIKTTNSYEGMEYNNPGPAHLAIGQEAAYVGQA 95 Query: 97 MSLTEGDQMITAYREHGHILACGV------------------DASKI------------- 125 LT D ++R HG +LA G+ D KI Sbjct: 96 YDLTIDDFSFGSHRAHGEVLAKGLSAIEKLSDEELIKIMEEFDEGKIYKIIKENTDTDDV 155 Query: 126 ------------MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +AE+ ++ G SKG GGSMH + G Y + IVG + TG A Sbjct: 156 KEIARDFYLYGFLAEIFAKETGFSKGLGGSMHAYFLPFGLYPNNAIVGGCAPIATGAALF 215 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAA------LWN------LNVIYVIENNQYA 221 + + I + GDGA G VYES N A+ LW L +IY + NN Y Sbjct: 216 KRANKKKGIVISNCGDGAIGCGPVYESMNFASMDQLRGLWEEGYNGGLPIIYNVFNNSYG 275 Query: 222 MGTSVSRASAQTNFSKR---GVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 MG + + R GV+ N + +VDG + AV + +GP+++ Sbjct: 276 MGGQTKGETMAYDMVARLGAGVTPNQMHAERVDGYNPLAVIDAYRRKRKIIEEGEGPVLL 335 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E++TYR+ GHS SD + YRT+EE+ + D I +++ E DLK+IE+ VR Sbjct: 336 EVITYRFTGHSPSDASTYRTKEEVTAWEA-QDSIIDFGNQMIEAGICDEKDLKDIELKVR 394 Query: 338 KIINNSVEFA 347 + I +V+ + Sbjct: 395 EDIKKAVKLS 404 >gi|320449333|ref|YP_004201429.1| 2-oxoisovalerate dehydrogenase subunit alpha [Thermus scotoductus SA-01] gi|320149502|gb|ADW20880.1| 2-oxoisovalerate dehydrogenase, subunit alpha [Thermus scotoductus SA-01] Length = 367 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 90/312 (28%), Positives = 149/312 (47%), Gaps = 8/312 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 YR ML R +E+ L G F G EA VG+ ++ G D + YR+HG Sbjct: 42 YRDMLAARMLDERYTILIRTGKTS-FIAPAAGHEAAQVGIAHAIRRGFDWVFPYYRDHGL 100 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 LA G+ ++ ++ Q +KG+ H S ++ + + V G A + Sbjct: 101 ALALGLPPKELFGQMLATQADPNKGRQMPEHPGSKALNYFTVASPIASHVPPAAGAAISM 160 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K R+ ++ V FGDGA ++G Y N AA+ +++ ENN YA+ SR + Sbjct: 161 KLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYSRQTHSPT 220 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + + +F IPG VDGMD+ A + +AV R +GP ++E+ YRY HS + D + Sbjct: 221 LADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARMGEGPSLVELRVYRYGPHSSADDDS 280 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINNSVEFAQSDK 351 YR +EE+ R DPI + +R L + W E + +++ +R + ++ A+ Sbjct: 281 RYRPKEEVEAWRKR-DPILRF-QRFLEGRGLWNLEWE-EDLRAEIRAELERGLKEAEEAG 337 Query: 352 EPDPAELYSDIL 363 P ++ D+L Sbjct: 338 AVPPEWMFDDVL 349 >gi|297583898|ref|YP_003699678.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Bacillus selenitireducens MLS10] gi|297142355|gb|ADH99112.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Bacillus selenitireducens MLS10] Length = 362 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 17/313 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + EQ M+ R ++++A L G +G + + GQEA ++G +L + D Sbjct: 32 MPDLSDEQLKELMTRMVYTRIWDQRAISLNRQGRLGFYAPVA-GQEASMIGSHFALEKQD 90 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I GV + G G +G + M I+GAQ Sbjct: 91 WILPGYRDIPQIHYHGVPLKQAFLWSRGHFAGGQMPEGVRVMMPQI---------IIGAQ 141 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K + D + + GDG A+QG YE N A +N I+V++NN++A+ Sbjct: 142 IVQTAGVAMGLKKNKEDAVAITYTGDGGASQGDFYEGMNFAGAFNSPAIFVVQNNRFAIS 201 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + SA +++ V+ I G+QVDGMD+ AV A +A GP +IE LTYR Sbjct: 202 VPVEKQSAAKTIAQKAVAAGIHGVQVDGMDVLAVYAATQEARKRGLEDNGPTLIETLTYR 261 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNVRKII 340 Y H+M+ DP YRT EE +E DP+ + RK L N W E + K +E ++ I Sbjct: 262 YGPHTMAGDDPTRYRTSEEDSEWEKK-DPLVRFRKFLEEKNLWTEEEEEKIVE-QAKEDI 319 Query: 341 NNSVEFAQSDKEP 353 +++ ++D EP Sbjct: 320 KKAIK--ETDNEP 330 >gi|94313061|ref|YP_586270.1| putative puryvate dehydrogenase E1 component subunit alpha [Cupriavidus metallidurans CH34] gi|93356913|gb|ABF11001.1| putative oxidoreductase (puryvate dehydrogenase E1 component, alpha subunit) [Cupriavidus metallidurans CH34] Length = 367 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 89/315 (28%), Positives = 155/315 (49%), Gaps = 18/315 (5%) Query: 43 EVSEFNKEQE--LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 ++ +F ++ L YR M+L R+F+ KA + G +G F +GQEA+ VG+ ++ Sbjct: 24 DLPDFARDPATLLPLYRAMVLTRQFDLKAIAMQRTGQIGTFAS-ALGQEAIGVGVATAMR 82 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D ++ +YR+H GV M E GG +G F+ +G + Sbjct: 83 RDDVLVPSYRDHAAQFVRGV----TMTESLLYWGGDERGSA-----FAAVPYDFGNCVPI 133 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 G QV G+A+ K R++ + V GDG ++G YE N+A W++ ++ VI NNQ+ Sbjct: 134 GTQVGHAAGVAYTFKLRQAPNVAVCILGDGGTSKGDFYEGMNMAGAWHVPLVIVINNNQW 193 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ ++ +A +++ ++ IPG Q+DG D+ AV+ + A+ + R GP +IE + Sbjct: 194 AISMPRAKQTAAATLAQKAIAAGIPGEQIDGNDVIAVRQRVGAAIEHARHGGGPTLIEAV 253 Query: 281 TYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLH-NKWAS---EGDLKEIEMN 335 +YR H+ +D A+ YR + E +PI ++R L W + E +KE + Sbjct: 254 SYRLGDHTTADDASRYRDEASVKEAW-RCEPIIRLRDYLARLGAWDAAQEEALIKECQQA 312 Query: 336 VRKIINNSVEFAQSD 350 V + + D Sbjct: 313 VGAAVQAYLALPHPD 327 >gi|145495260|ref|XP_001433623.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124400742|emb|CAK66226.1| unnamed protein product [Paramecium tetraurelia] Length = 181 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 76/163 (46%), Positives = 101/163 (61%), Gaps = 4/163 (2%) Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A LW+L IY IENN + MGTS+ RASA T F RG IPG+Q+DG ++ V+ T+ Sbjct: 1 MAQLWHLPAIYFIENNLFGMGTSIDRASANTKFYTRGDV--IPGIQIDGNNVFQVRETLK 58 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHN 321 A +C KGPI IE +TYRY GHSMSDP YRTREE+ + R D I V+ +L N Sbjct: 59 FAKKHC-LEKGPIFIEAMTYRYHGHSMSDPGVTYRTREEVQQQRKTRDCINYVKNIILEN 117 Query: 322 KWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 K A E L+EI+ + I+ +VE A+ D P EL +D+ + Sbjct: 118 KVADEHQLEEIDNTAQNEIDIAVEQAKVDPVPPSTELATDVYV 160 >gi|261406245|ref|YP_003242486.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Paenibacillus sp. Y412MC10] gi|261282708|gb|ACX64679.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Paenibacillus sp. Y412MC10] Length = 375 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 98/337 (29%), Positives = 166/337 (49%), Gaps = 13/337 (3%) Query: 14 KMALNP-SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQL 72 KM P V + T SV D + + E + +Q M+ R ++++A L Sbjct: 20 KMTKVPYEVYTEEVGTLSVLSPDGKIVNKDLLPELSDDQLKEIMYRMVFTRTWDDRAVNL 79 Query: 73 YGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR 132 G +G + + GQEA +VG + +L + D + YR+ I+ G+ + G Sbjct: 80 GRQGRLGFYAPVS-GQEATMVGSEFALEKDDFICPGYRDMPQIVWHGLPLYQAFLYSRGH 138 Query: 133 QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAA 192 Q G +G ++ M I+GAQ+ GIA K ++ ++ + GDG + Sbjct: 139 QHGGQIPEGVNVLMPQI---------IIGAQILHAMGIAMGYKLKKQKQVVITYTGDGGS 189 Query: 193 NQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 ++G YE N A ++ L VI+ ++NN YA+ T S+ +A + + + V+ I G++VDGM Sbjct: 190 SEGDFYEGLNYAGVYKLPVIFFVQNNGYAITTPFSKQTAALSIAHKAVAAGIKGVKVDGM 249 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPI 311 D+ AV + A R +G +IE +TYR+R HS+SD A YRT+EE E + DPI Sbjct: 250 DVLAVIKAVQDAAERGRNGEGATLIEAVTYRFRPHSLSDDATKYRTKEEEGEW-NEKDPI 308 Query: 312 EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++ K L +E D ++ + +N ++ A+ Sbjct: 309 ARLAKYLEAKGLWTEEDTARVKEEAKAKVNEQIKKAE 345 >gi|74006563|ref|XP_858526.1| PREDICTED: similar to Pyruvate dehydrogenase E1 component alpha subunit, somatic form, mitochondrial precursor (PDHE1-A type I) isoform 3 [Canis familiaris] Length = 205 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 78/149 (52%), Positives = 98/149 (65%), Gaps = 4/149 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLRYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRRGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 HM++ KN FYGG+GIVGAQV LG GIA A Sbjct: 154 HMYA-KN-FYGGNGIVGAQVPLGAGIALA 180 >gi|313623869|gb|EFR93986.1| 2-oxoisovalerate dehydrogenase subunit alpha [Listeria innocua FSL J1-023] Length = 331 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 151/309 (48%), Gaps = 7/309 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGH 114 Y ML+ RR +E+ L G + F GQE +G + + D + YR+ Sbjct: 17 YETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYALPYYRDLAV 75 Query: 115 ILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +LA G+ A IM + + S G+ H N V Q GI A Sbjct: 76 VLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLA 135 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K D G+G++NQG +E N A++ L V++VI NNQYA+ S+ A Sbjct: 136 AKMAGDDIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQYAISVPASKQYAAE 195 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-SMSDP 292 S R + + IPG +VDG ++ V A +A R +GP +IE ++YR+ H S D Sbjct: 196 KLSDRALGYGIPGERVDGSNMGEVYAAFKRAADRARNGEGPTLIETVSYRFTPHSSDDDD 255 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD-- 350 ++YR+REE++E + DP++ + LL + +E + EIE ++ K +N + ++A+S Sbjct: 256 SSYRSREEVDEAKGK-DPLKIFQAELLEEGYLTEEKIAEIEKSIAKEVNEATDYAESAAY 314 Query: 351 KEPDPAELY 359 EP+ + LY Sbjct: 315 AEPESSLLY 323 >gi|222478578|ref|YP_002564815.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Halorubrum lacusprofundi ATCC 49239] gi|222451480|gb|ACM55745.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Halorubrum lacusprofundi ATCC 49239] Length = 375 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 92/322 (28%), Positives = 158/322 (49%), Gaps = 16/322 (4%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 +V + + E + YR M L R F+ +A L G +G + L GQE +G +L E Sbjct: 32 DVPDLDDEALVEMYRDMRLARHFDGRAVSLQRQGRMGTYPPLS-GQEGAQIGSATALDED 90 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D M+ +YREHG L G+ + + G + G + +G ++ + + + Sbjct: 91 DWMVPSYREHGAALVRGLPLKQTLLYWMGHEAGNATPEGVNVFPVAVP---------IAS 141 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV TG A+A+K R + + FGDGA ++G +E N A +++ ++ NNQ+A+ Sbjct: 142 QVPHATGAAWASKLRGENDAFLCYFGDGATSEGDFHEGVNFAGVFDTPTVFFCNNNQWAI 201 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV----KATMDKAVAYCRAHKGPIIIE 278 R + +++ ++ I G+QVDGMD AV KA ++KA P +IE Sbjct: 202 SVPRERQTRSATLAQKAEAYGIDGVQVDGMDPLAVYSVTKAAVEKARDPETDRPRPTLIE 261 Query: 279 MLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 + YR+ H+ + DP YR +E+ + DPI ++ + L + + EIE V Sbjct: 262 AIQYRFGAHTTADDPTVYRDDDEVESWKRK-DPIPRLERYLRSEGVLDDERVAEIETAVE 320 Query: 338 KIINNSVEFAQSDKEPDPAELY 359 + ++E A+S+ P P E++ Sbjct: 321 TRVAEAIEAAESEVRPKPQEMF 342 >gi|317123420|ref|YP_004097532.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Intrasporangium calvum DSM 43043] gi|315587508|gb|ADU46805.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Intrasporangium calvum DSM 43043] Length = 384 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 140/299 (46%), Gaps = 21/299 (7%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ E S YR ++LIRR + + L G +G + L +GQEA VG +L D Sbjct: 43 VADLTPEDLRSFYRDLVLIRRLDAEGYALQRQGELGLWPSL-LGQEAAQVGSGRALKPHD 101 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 YREHG G+D + G G K + H+++ ++GAQ Sbjct: 102 MCFPTYREHGVGFVRGMDPQSSLQLFRGVSQGGWDPKDHNFHLYTI---------VIGAQ 152 Query: 164 VSLGTGIAFANKY--------RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 TG A K D + FGDGA++QG V E+F AA ++ V++ Sbjct: 153 TLHATGYAMGVKMDGNVGTGDPDRDTAVICYFGDGASSQGDVNEAFVYAASFDAPVVFFC 212 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +NNQ+A+ VS+ + F +R F PGM+VDG D+ A A + R GP+ Sbjct: 213 QNNQWAISEPVSKQTRIPLF-QRARGFGFPGMRVDGNDVLATYAVTQHCLDEARNGNGPL 271 Query: 276 IIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 +IE TYR H+ + DP YR E+ + + DPI +++ L H WA E ++ Sbjct: 272 LIEAFTYRMGAHTTADDPTKYRVSAEVEQWKFR-DPILRLKTYLSHEGWADEAFFTRVD 329 >gi|315303040|ref|ZP_07873749.1| 2-oxoisovalerate dehydrogenase subunit alpha [Listeria ivanovii FSL F6-596] gi|313628591|gb|EFR97015.1| 2-oxoisovalerate dehydrogenase subunit alpha [Listeria ivanovii FSL F6-596] Length = 331 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 95/318 (29%), Positives = 152/318 (47%), Gaps = 7/318 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 K+Q L Y ML+ RR +E+ L G + F GQE +G + E D Sbjct: 8 LTKDQLLKMYETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLEKDYA 66 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR+ +LA G+ A IM + + S G+ H +N V Q Sbjct: 67 LPYYRDLAVVLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKENRIVTQSSPVTTQF 126 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 GI A K G+G++NQG +E N A++ L V++VI NN+YA+ Sbjct: 127 PHAAGIGLAAKMANDPVAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNKYAISV 186 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S+ A S R + + IPG +VDG D+ V +A R +GP +IE ++YR+ Sbjct: 187 PASKQYAAEKLSDRAIGYGIPGERVDGTDMGEVYTAFKRAADRARNGEGPTLIETVSYRF 246 Query: 285 RGH-SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 H S D ++YR++ E+ E + DP++ K L+ + +E + EIE ++ K +N + Sbjct: 247 TPHSSDDDDSSYRSKSEVAEAKEK-DPLKIFEKELVDEGYLTEEKIAEIEKSIAKEVNEA 305 Query: 344 VEFAQSD--KEPDPAELY 359 ++A+S EP+ + LY Sbjct: 306 TDYAESAAYAEPESSLLY 323 >gi|255514205|gb|EET90467.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 357 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 101/321 (31%), Positives = 160/321 (49%), Gaps = 21/321 (6%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E + + L+ Y LM R + K L G + L +G+EA +G ++L + D + Sbjct: 30 ELDDKALLNMYMLMSKARSLDAKLLSLQRQGRALTYAPL-VGEEATQIGSALALRKEDFV 88 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R+H + GV K M G + G +G + V Q+ Sbjct: 89 VPNFRQHAVYMTIGVPIEKFMEYWKGYEEGDVMPEGVNATPVIVP---------VSTQMP 139 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 GIA+A KY++ D + GDG ++G YE+ N A ++ ++ +IENNQ+A+ Sbjct: 140 HAAGIAYAYKYKKKDGAVLTYVGDGGTSEGDFYEAINFAGVFKAPLVAIIENNQWAISVP 199 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV-KATMDKAVAYCRAHKGPIIIEMLTYRY 284 SR SA +++ ++ I G+QVDG D+ AV KAT + A A GP +IE +TYR Sbjct: 200 RSRQSAAQTLAQKAIAAGIKGLQVDGNDVIAVYKATRE---ALENAKDGPTLIECITYRL 256 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR--KIIN 341 H+ + DP YR E+ + ++ DPI ++RK L K D KE EM+ R K I+ Sbjct: 257 SMHTTADDPEKYRDDSEVEKWKA-RDPILRLRKYL--EKKGLWDDAKEKEMSDRQSKEID 313 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 V A++ K PDP ++ +I Sbjct: 314 EGVAAAEAFK-PDPKAMFENI 333 >gi|315646626|ref|ZP_07899743.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Paenibacillus vortex V453] gi|315277952|gb|EFU41273.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Paenibacillus vortex V453] Length = 375 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 90/294 (30%), Positives = 154/294 (52%), Gaps = 13/294 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+ R ++++A L G +G + + GQEA +VG + +L + D + YR+ I Sbjct: 64 YR-MVFTRTWDDRAVNLGRQGRLGFYAPVS-GQEATMVGSEFALEKDDFVCPGYRDMPQI 121 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G+ + G Q G +G ++ M I+GAQ+ GIA K Sbjct: 122 VWHGLPLYQAFLYSRGHQHGGQIPEGVNVLMPQI---------IIGAQILHAMGIAMGYK 172 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 ++ ++ + GDG +++G YE N A ++ L VI+ ++NN YA+ T S+ +A + Sbjct: 173 LKKQKQVVITYTGDGGSSEGDFYEGLNYAGVYKLPVIFFVQNNGYAITTPFSKQTAALSI 232 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 + + V+ I G++VDGMD+ AV + A R +G +IE +TYR+R HS+SD A+ Sbjct: 233 AHKAVAAGIKGVKVDGMDVLAVIKAVRDAAERGRNGEGATLIEAVTYRFRPHSLSDDASK 292 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 YRT+EE E + DPI ++ K L +E D ++ + +N ++ A+ Sbjct: 293 YRTKEEEGEW-NEKDPIARLAKYLEQKGLWTEEDTARVKDEAKAKVNEQIKKAE 345 >gi|282164387|ref|YP_003356772.1| pyruvate dehydrogenase E1 component alpha subunit [Methanocella paludicola SANAE] gi|282156701|dbj|BAI61789.1| pyruvate dehydrogenase E1 component alpha subunit [Methanocella paludicola SANAE] Length = 362 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 86/283 (30%), Positives = 141/283 (49%), Gaps = 12/283 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR+M+ R F+EKA +L G +G + L GQEAV +G +L + D M+ +YRE Sbjct: 38 LKIYRMMVQARAFDEKALKLQRAGRMGTYPPLS-GQEAVQIGSAFALDKSDWMVPSYREA 96 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ GV G G G + S VG+Q TG+A+ Sbjct: 97 GAMMVKGVPMKLQYMLWMGNDWGNRIPDGVNCLPVSIP---------VGSQTLHATGMAW 147 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A R+ + FGDGA ++G +ES N A ++ + +++ NN +A+ T V + Sbjct: 148 AANVRKEKNAFLCYFGDGATSRGDFHESLNFAGVFQVPAVFLCSNNGFAISTPVVLQTHA 207 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 +++ +++ I G ++DGMD+ A A+ + +GP +IE L YR+ H+ +D Sbjct: 208 ETIAQKAIAYGIRGYRLDGMDVLASYVLAKDALDRAKKGEGPTLIEALCYRFGPHTTADN 267 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIE 333 P YR +EE+ ++ DPI + R L+ K W + + IE Sbjct: 268 PDLYREKEEVERIKKEKDPIARFRNYLVKRKLWDDQKEKALIE 310 >gi|56476645|ref|YP_158234.1| putative pyruvate dehydrogenase E1 component (alpha subunit) oxidoreductase protein [Aromatoleum aromaticum EbN1] gi|56312688|emb|CAI07333.1| putative pyruvate dehydrogenase E1 component (alpha subunit) oxidoreductase protein [Aromatoleum aromaticum EbN1] Length = 362 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 93/320 (29%), Positives = 154/320 (48%), Gaps = 18/320 (5%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E+ + YR M+L R F+ KA L G +G F +GQEA+ VG+ ++ D ++ Sbjct: 30 LDPEKLIPLYRAMVLTRTFDTKAIALQRTGKLGTFAS-ALGQEAIGVGVAAAMRAEDVLV 88 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +YR+H L GV MAE GG +G F+ + + QV Sbjct: 89 PSYRDHPAQLLRGV----TMAESLLYWGGDERGSD-----FAGPRDDFPICVPIATQVCH 139 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A+A + R+ ++ V GDG ++G YE+ N A+W ++ V+ NNQ+A+ Sbjct: 140 AAGAAYAFQLRQEARVAVCFIGDGGTSKGDFYEALNFGAVWKAPLVVVVNNNQWAISVPR 199 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S SA +++ ++ I G QVDG DI AV +A+ R+ GP +IE L+YR Sbjct: 200 SMQSAAQTLAQKAIAAGIEGCQVDGNDIVAVHHAARQAIEKARSGGGPSLIEALSYRLGD 259 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNVRKI---INN 342 H+ +D A+ + + +P+ ++R L+ N W D + E VR+ +N Sbjct: 260 HTTADDASRYRDPAVVQENWTFEPVVRLRNHLVRLNAW----DPQHEEQLVRECGEAVNA 315 Query: 343 SVEFAQSDKEPDPAELYSDI 362 +VE + P P ++ + Sbjct: 316 AVERYLATPPPTPEAMFDHL 335 >gi|154686664|ref|YP_001421825.1| BkdAA [Bacillus amyloliquefaciens FZB42] gi|154352515|gb|ABS74594.1| BkdAA [Bacillus amyloliquefaciens FZB42] Length = 330 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 152/314 (48%), Gaps = 9/314 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + E+ + YR MLL R+ +E+ L G + F C GQEA VG +L + D + Sbjct: 11 LSDEEAVEMYRTMLLARKIDERMWLLNRSGKIP-FVVSCQGQEAAQVGAAYALNRDTDYV 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGA 162 + YR+ G +LA G+ A +M ++G GG H KN G V Sbjct: 70 LPYYRDIGVVLAFGMTAKDLM--MSGFAKAADPNSGGRQMPGHFGQKKNRIVTGSSPVTT 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV GIA A + + D + V FG+G++NQG +E N AA++ L VI++ ENN+YA+ Sbjct: 128 QVPHAVGIALAGRMDKKDIVSFVTFGEGSSNQGDFHEGANFAAVYKLPVIFMCENNKYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 R A S R + +PG+ VDG D+ V + +A +GP +IE ++Y Sbjct: 188 SVPYDRQVACEKISDRAAGYGMPGVTVDGNDLLEVYRAVKEARERASKGEGPTLIETVSY 247 Query: 283 RYRGH-SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R H S D ++YR REE+ E + DP+ + L E + K + ++ I+N Sbjct: 248 RLTPHSSDDDDSSYREREEVEEAK-KQDPLLLYKAYLKEAGLLGEEEEKTMLDDIMAIVN 306 Query: 342 NSVEFAQSDKEPDP 355 + + A+ P Sbjct: 307 EATDEAEKAPYASP 320 >gi|324997351|ref|ZP_08118463.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Pseudonocardia sp. P1] Length = 396 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 90/316 (28%), Positives = 148/316 (46%), Gaps = 19/316 (6%) Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 S YR ++L+RR + + L G +G + L +GQEA VG +L D +YREHG Sbjct: 65 SLYRDLVLVRRADREGNSLQRQGELGIWVPL-LGQEAAQVGSGRALRPTDMCFPSYREHG 123 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 GVD ++++ G G G H ++ ++G Q G A Sbjct: 124 VAWTRGVDPTELLGIFRGTDHGGWDFTGKRFHPYTI---------VIGNQCLNAAGYAMG 174 Query: 174 NKYR------RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 ++ + + + FGDGA +QG V+E F AA ++ +++ +NNQ+A+ + Sbjct: 175 QRFESKVGDPETGEATICYFGDGATSQGDVHEGFVWAAAYDAPLVFFCQNNQWAISVPLD 234 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R + + +R + PG++VDG D+ A A A+ CR GP++IE TYR H Sbjct: 235 RQT-RVPLYQRARGYGFPGVRVDGNDVLACLAVTRWALEECRTGNGPVLIEAFTYRMDSH 293 Query: 288 SMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + SD A YR +E+ E+ DPIE+VR L ++ + F Sbjct: 294 TTSDDATRYRLADEV-ELWKLKDPIERVRVHLTRRHGVEPEFFDGVDGEADALGERLRAF 352 Query: 347 AQSDKEPDPAELYSDI 362 +S +P P ++S++ Sbjct: 353 CRSMPQPGPERMFSEV 368 >gi|30022243|ref|NP_833874.1| 2-oxoisovalerate dehydrogenase alpha subunit [Bacillus cereus ATCC 14579] gi|29897800|gb|AAP11075.1| 2-oxoisovalerate dehydrogenase alpha subunit [Bacillus cereus ATCC 14579] Length = 333 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 144/306 (47%), Gaps = 5/306 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ L +R MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 14 LSDEQVLEMFRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYA 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G L G+ A ++M + G + G G M H KN G V Q Sbjct: 73 LPYYRDMGVALTFGMTAKELMLSAFAKAGDPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQ 131 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 132 VPHAVGIALAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAIS 191 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + A N S R + + +PG +DG D AV + +A R +GP +IE ++YR Sbjct: 192 IPVEKQLACKNVSDRAIGYGMPGYTIDGNDPLAVYKAVKEAADRGRRGEGPTLIETVSYR 251 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D +E E D I L +E K++ + I+N + Sbjct: 252 LTAHSSDDDDRVYRDKEEVEEAKKKDSIITFAAYLKEAGVLTEESEKQMLDEIMHIVNEA 311 Query: 344 VEFAQS 349 E+A++ Sbjct: 312 TEYAEN 317 >gi|54294399|ref|YP_126814.1| hypothetical protein lpl1468 [Legionella pneumophila str. Lens] gi|53754231|emb|CAH15708.1| hypothetical protein lpl1468 [Legionella pneumophila str. Lens] Length = 357 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 87/317 (27%), Positives = 156/317 (49%), Gaps = 17/317 (5%) Query: 43 EVSEFNKEQEL--SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 E+ F Q + Y++M+L R F++KA L G +G + + GQEA+ + +L Sbjct: 24 ELPPFADNQSILKELYKIMVLTRTFDKKAIALQRTGKMGTYAPIN-GQEAISTAIGHALK 82 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D ++ YR++ GV S+I+A G + G + Sbjct: 83 PEDVLVPYYRDYAAQFQRGVKMSEILAFWGGDERGSHYSNNAEDLPICVP---------I 133 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 +Q G+AFA KY+ ++ VVC G+G ++G YE+ N+A W L V++V+ NN++ Sbjct: 134 ASQCLHAAGVAFAFKYKNQSRVAVVCIGEGGTSEGDFYEAMNVAGAWKLPVVFVVNNNKW 193 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ + + + +++ ++ G+Q+DG DI A + + A+ R GP +IE L Sbjct: 194 AISVPIEKQTGSQTIAQKAIAAGFSGVQIDGNDIFAARQVIGDAIEKARQGGGPTLIEAL 253 Query: 281 TYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGDLKEIEMNVRK 338 TYR H+ +D A Y+ E+ ++ +PI + + L+ N W SE D +++ + + Sbjct: 254 TYRLCDHTTADDATRYQPSHEVEGAKAK-EPIVRFKHYLMQQNIWTSE-DEEKLVIECSE 311 Query: 339 IINNSVEFAQSDKEPDP 355 + +VE + K P P Sbjct: 312 TVEKAVEEYLNTK-PQP 327 >gi|313678230|ref|YP_004055970.1| pyruvate dehydrogenase E1 component subunit alpha [Mycoplasma bovis PG45] gi|312950140|gb|ADR24735.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycoplasma bovis PG45] Length = 363 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 83/298 (27%), Positives = 155/298 (52%), Gaps = 13/298 (4%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 VD ++ ++ SE K++ + Y+ M+ R+++ + L G +G F +G+EA + Sbjct: 24 VDGKLIQEYKPSEETKKKLVEMYKNMIRSRQWDLYSLTLQKTGRLGTFAP-ALGEEAALT 82 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G+ +L + D I YR LA G+ KI + G + G + ++ + Sbjct: 83 GIGYNLNKEDWFIPHYRVLPTQLARGISMDKIYSYWQGSEIGSAFAGTNTLPL------- 135 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 H ++G+QV + G+A A K++ + +V G+G N+G+ +E N+A++ ++ Sbjct: 136 ---HVVIGSQVPIAAGVAQALKFQGKKALAMVTIGNGGTNEGEFHEGLNMASVRKWPLVT 192 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 V+ NNQ+A+ + S+R S+++PG++VDG D+ AV M + + R G Sbjct: 193 VVMNNQWAISVPEHNSYIVKTLSQRAKSYDMPGVRVDGNDLIAVNEVMQEVYDFVREGNG 252 Query: 274 PIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 P+++EM+T+R H+ SD P YR+R E+ + +P ++ LL K +E D+K Sbjct: 253 PVLVEMVTWRQGQHTTSDNPRVYRSR-ELEVEKEKWEPFHRIEAYLLSEKLITEEDIK 309 >gi|332665004|ref|YP_004447792.1| 2-oxoisovalerate dehydrogenase beta (E1) subunit [Haliscomenobacter hydrossis DSM 1100] gi|332333818|gb|AEE50919.1| 2-oxoisovalerate dehydrogenase beta (E1) subunit [Haliscomenobacter hydrossis DSM 1100] Length = 666 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 154/302 (50%), Gaps = 4/302 (1%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 R E+K +L G V + IGQEA+ VG ++L + + +R G A GV Sbjct: 32 RLIEDKMLKLLRQGKVSKWFS-GIGQEAIAVGATLALLPDEMIFPMHRNLGVFTARGVPF 90 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 +++ A+ G+ G +KG+ S H + ++ G +G Q+SL G+ A+K ++ Sbjct: 91 NRLFAQWQGKYSGYTKGRDRSFHFGTLEHHIVGMISHLGPQLSLADGVGLAHKLAGEGRV 150 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 + GDGA ++G+ +E+ N+AA+W L VI++IENN Y + T + + +G+ + Sbjct: 151 SLTFTGDGATSEGEFHEALNVAAVWQLPVIFLIENNGYGLSTPPTEQYRCAQLADKGIGY 210 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEIN 302 + + VDG +I + T+ + R + P+++E +T+R RGH + Y + ++ Sbjct: 211 GMKALTVDGNNILEMYRTVRELAESMRENPEPVLLECMTFRMRGHEEASGTKYVPKALMD 270 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE--FAQSDKEPDPAELYS 360 + + DP+ + L+ +EG K++ +K I+ ++ F + D + + E S Sbjct: 271 QW-ALRDPLSNYERFLMEEGLLTEGSKKDLTAQWKKHIDAGLQQAFDEGDPQNELQEELS 329 Query: 361 DI 362 D+ Sbjct: 330 DV 331 >gi|238632086|gb|ACR50771.1| pyruvate dehydrogenase E1 alpha subunit [Streptomyces longisporoflavus] Length = 345 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 82/250 (32%), Positives = 130/250 (52%), Gaps = 11/250 (4%) Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 IR FE K L+G G + G H C+GQE V V ++ L + D + + +R HGH L+ D Sbjct: 61 IRHFERKLLDLFGQGELNGTTHTCLGQEYVPVSLRPLLEDRDFVFSNHRGHGHYLSRFRD 120 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 + ++AE+ GR+G + G GGS H+ + Y G+ G + + G R+D Sbjct: 121 PAGLLAEIMGREGAVCSGVGGSQHILRDR---YLSTGVQGQSLPVAVGAGL--HQLRTDP 175 Query: 182 ICVVC--FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 +VC GDG +G VYE+ N+A LW + ++ +E+N A T + A+ R Sbjct: 176 GALVCAFIGDGTWGEGAVYEALNMAQLWRVPLLVAVEHNGIAQSTP-AEANMAGTIEGRA 234 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 +F I +V +D+ AV+A + V R + P+++E +T+R HS D + RTRE Sbjct: 235 AAFGIRYQRVASLDVNAVRAGLAPLVREVREQRSPLVVEFVTHRIGPHSKGD--DTRTRE 292 Query: 300 EINEMRSNHD 309 ++ R HD Sbjct: 293 QLAHARE-HD 301 >gi|254499323|ref|ZP_05111994.1| pyruvate dehydrogenase E1 alpha subunit [Legionella drancourtii LLAP12] gi|254351428|gb|EET10292.1| pyruvate dehydrogenase E1 alpha subunit [Legionella drancourtii LLAP12] Length = 357 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 80/300 (26%), Positives = 154/300 (51%), Gaps = 13/300 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y++M+L R F++KA L G +G + + GQEA+ + ++ D YR++ Sbjct: 39 YKIMVLTRTFDKKAIALQRTGKMGTYAPIN-GQEAISAAIGHAMRPEDVFAPYYRDYAAQ 97 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + GV S+I++ G + G FS + + +Q G+AFA + Sbjct: 98 IQRGVKMSEILSYWGGDERG---------SKFSCNSQDLPICVPIASQCLHAAGVAFAFQ 148 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 YR ++ VVC G+G ++G YE+ N+A +W L +++V+ NNQ+A+ + + Sbjct: 149 YRSEPRVAVVCIGEGGTSEGDFYEAINVAGIWKLPLVFVVNNNQWAISVPRDKQTGTETI 208 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 +++ ++ GMQ+DG DI A + + A+ R +GP +IE ++YR H+ +D A Sbjct: 209 AQKAIAAGFTGMQIDGNDILATRQVIGDAIEKARRGEGPTLIEAMSYRLSDHTTADDATR 268 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV-EFAQSDKEP 353 Y+ E+ + R +PI + ++ LL K + + +++ ++ + + +V E+ S +P Sbjct: 269 YQPSAEVEQARPK-EPIARFKEYLLQEKIWNAQEEEQLVIHCAEEVEKAVDEYLSSTPQP 327 >gi|168203420|gb|ACA21555.1| acetoin dehydrogenase alpha chain [Candidatus Pelagibacter ubique] Length = 319 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 89/269 (33%), Positives = 129/269 (47%), Gaps = 21/269 (7%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M L+R + + Y + HL IGQE M ++L + D I+ +R H H L Sbjct: 15 MYLVRMTDTHISEKYSEQKMRCPIHLSIGQEGPSAAMNLNLKKDDLSISYHRSHAHYLNK 74 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G K++AEL G++ G SKG GGSMH+ K F G IV + +G G AF+ K ++ Sbjct: 75 GGSLKKLIAELYGKKTGCSKGVGGSMHLIDLKKNFLGSTAIVSNSIPVGVGYAFSRKLKK 134 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 S+ + GD + +G YES N AAL NL VI+ ENN+Y S +N KR Sbjct: 135 SNSRVCIFLGDASTEEGVFYESVNFAALKNLPVIFFCENNKY---------SVYSNLDKR 185 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAV---AYCR-----AHKGPIIIEMLTYRYRGH--- 287 F V + + + K K + ++ R K PI E+ TYRY H Sbjct: 186 QPKFRKIFKMVKSLGVESYKINSFKPLEIYSFIRKKLKKNLKKPIFFEVDTYRYYEHCGP 245 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRK 316 ++ D NYR ++E+ + DPI+ K Sbjct: 246 NLDDNLNYRPKKEV-RLWKGRDPIKLTEK 273 >gi|332306594|ref|YP_004434445.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173923|gb|AEE23177.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Glaciecola agarilytica 4H-3-7+YE-5] Length = 398 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 84/318 (26%), Positives = 150/318 (47%), Gaps = 13/318 (4%) Query: 34 VDIPFLEGFE----------VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCH 83 VD+P L+ + + + ++++ L +R M IR +E+ G + F Sbjct: 25 VDLPMLQILQPDGSVHDDADMPDLSRDEALKIFRTMHYIRVLDERMVGAQRQGRIS-FYL 83 Query: 84 LCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGS 143 C G+EA +G +L+E D +++ YRE G + G + M ++ + +KG+ Sbjct: 84 ACSGEEASTIGSAAALSENDMIMSQYREQGALAYRGYRTEQFMNQMFSNKLDPNKGRQMP 143 Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 +H F +G Q+ G A+ K ++ + + FG+GAA++G + N+ Sbjct: 144 IHYGDKALNFMTISSPLGTQIPQAAGYAYGQKMAGNEALTICYFGEGAASEGDFHAGLNM 203 Query: 204 AALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 A++ N VI+ NN YA+ T S + + RG+ + + ++VDG D+ AV K Sbjct: 204 ASVLNCPVIFFCRNNGYAISTPASEQFSGDGIASRGLGYGVKTIRVDGNDVLAVYLATQK 263 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 A P++IE +TYR HS S DP YR++EE + R DP+++ + Sbjct: 264 AREIALKENCPVLIEAMTYRLAAHSTSDDPTGYRSKEEEQKWREK-DPVQRFENWMKSKD 322 Query: 323 WASEGDLKEIEMNVRKII 340 W E + K+ R+ + Sbjct: 323 WIDEAEHKQFVEQTRQDV 340 >gi|116872803|ref|YP_849584.1| branched-chain alpha-keto acid dehydrogenase E1 (2-oxoisovalerate dehydrogenase alpha subunit) [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741681|emb|CAK20805.1| branched-chain alpha-keto acid dehydrogenase E1 (2-oxoisovalerate dehydrogenase alpha subunit) [Listeria welshimeri serovar 6b str. SLCC5334] Length = 331 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 95/319 (29%), Positives = 158/319 (49%), Gaps = 9/319 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 +++ + Y ML+ RR +E+ L G + F GQE +G + + D Sbjct: 8 LTEDKLIKMYETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYA 66 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR+ +L+ G+ A IM + + S G+ H N V Q Sbjct: 67 LPYYRDLAVVLSFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQF 126 Query: 165 SLGTGIAFANKYRRSDKICV-VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 GI A K DKI + G+G++NQG +E N A++ L V++VI NN+YA+ Sbjct: 127 PHAAGIGLAAKMA-GDKIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNKYAIS 185 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S+ A S R + + IPG +VDG ++ V +A R +GP +IE ++YR Sbjct: 186 VPASKQYAAEKLSDRAIGYGIPGERVDGTNMSEVYGAFKRAADRARNGEGPTLIETVSYR 245 Query: 284 YRGH-SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 + H S D ++YR+REE++E + DP++ ++ LL + +E + EIE N+ K +N Sbjct: 246 FTPHSSDDDDSSYRSREEVDEAKVK-DPLKIFQRELLEEGYLTEEKIAEIEKNIAKEVNE 304 Query: 343 SVEFAQSD--KEPDPAELY 359 + ++A+S EP+ + LY Sbjct: 305 ATDYAESAAYAEPESSLLY 323 >gi|254824569|ref|ZP_05229570.1| 2-oxoisovalerate dehydrogenase E1 component [Listeria monocytogenes FSL J1-194] gi|254932313|ref|ZP_05265672.1| 2-oxoisovalerate dehydrogenase E1 component [Listeria monocytogenes HPB2262] gi|293583869|gb|EFF95901.1| 2-oxoisovalerate dehydrogenase E1 component [Listeria monocytogenes HPB2262] gi|293593807|gb|EFG01568.1| 2-oxoisovalerate dehydrogenase E1 component [Listeria monocytogenes FSL J1-194] gi|332311813|gb|EGJ24908.1| 2-oxoisovalerate dehydrogenase subunit alpha [Listeria monocytogenes str. Scott A] Length = 331 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 7/309 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGH 114 Y ML+ RR +E+ L G + F GQE +G + + D + YR+ Sbjct: 17 YETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYALPYYRDLAV 75 Query: 115 ILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +LA G+ A IM + + S G+ H N V Q GI A Sbjct: 76 VLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLA 135 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K + G+G++NQG +E N A++ L V++VI NNQYA+ S+ A Sbjct: 136 AKMAGDEIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQYAISVPASKQYAAE 195 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-SMSDP 292 S R + + IPG +VDG ++ V A +A R +GP +IE ++YR+ H S D Sbjct: 196 KLSDRAIGYGIPGERVDGTNMGEVYAAFKRAADRARNGEGPTLIETVSYRFTPHSSDDDD 255 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD-- 350 ++YR+REE++E + DP++ + LL + +E + EIE ++ K +N + ++A+S Sbjct: 256 SSYRSREEVDEAKGK-DPLKIFQAELLEEGYLTEEKIAEIEKSIAKEVNEATDYAESAAY 314 Query: 351 KEPDPAELY 359 EP+ + LY Sbjct: 315 AEPESSLLY 323 >gi|76800932|ref|YP_325940.1| 2-oxoacid dehydrogenase E1 component, alpha subunit 1 [Natronomonas pharaonis DSM 2160] gi|76556797|emb|CAI48371.1| 2-oxoacid dehydrogenase E1 component, alpha subunit 1 [Natronomonas pharaonis DSM 2160] Length = 374 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 90/331 (27%), Positives = 155/331 (46%), Gaps = 24/331 (7%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + E L YR M L R F+E+A L G +G F + GQEA VG ++L D Sbjct: 27 VPDIDDETLLEMYRTMRLARHFDERAVSLQRQGRMGTFPPMS-GQEAAQVGSALALDADD 85 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +YREH G+D + + G + G + + ++F + Q Sbjct: 86 WVFPSYREHAAAYVRGIDLDQTLQYWMGDERG---SQTAAANVFPVAVP-------IATQ 135 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V TG+A+A + D + + FGDGA ++G +E N A +++L ++ NNQ+A+ Sbjct: 136 VLHATGVAWAADLKGDDIVSLCYFGDGATSEGDFHEGLNFAGVFDLPAVFFCNNNQWAIS 195 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG---------- 273 + SA +++ ++ G+ VDGMD AV +AV A Sbjct: 196 VPREQQSASATLAQKAHAYGFEGVLVDGMDPLAVYKVTREAVEKAHAADPSRDDAPGRAC 255 Query: 274 -PIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 P +IE + YR+ H+ + DP+ YR +E+ + DPI ++ L + + Sbjct: 256 RPTLIEAIQYRFGAHTTADDPSVYRDDDEVERWKQK-DPIPRLELFLRDRGLLDDERVAA 314 Query: 332 IEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 IE +V + ++VE A+S + P P ++ ++ Sbjct: 315 IEQSVTDEVADAVEAAESTERPAPDSMFDNV 345 >gi|315426819|dbj|BAJ48441.1| pyruvate dehydrogenase E1 component subunit alpha [Candidatus Caldiarchaeum subterraneum] Length = 347 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 95/325 (29%), Positives = 154/325 (47%), Gaps = 6/325 (1%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EGF E + LS YR M+ R + +L MG +G GQEA VG +L Sbjct: 8 EGFAEEELDPGLLLSMYRDMVCARVLDRWLMRLQRMGKIGIHAP-SEGQEAAGVGTAYAL 66 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 D + YRE +A V + I+ KG+ +++ K+ Sbjct: 67 GTNDWIFPLYRELPVFVARRVPIADIVNRNLANSADPLKGRDFAVYG-DIKHRIVPAPIP 125 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V + G A + KY++ ++ + FGDGA ++G +E+ N A ++ +++V NNQ Sbjct: 126 VAVHIPSAVGFALSLKYKKLSEVVINYFGDGATSKGDFHEALNFAGVFKAPIVFVCVNNQ 185 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ VSR +A + S + ++ G+ VDG D+ A KAV R +GP +IE Sbjct: 186 YAISVPVSRQTAVEHLSLKAAAYGFEGVSVDGNDVVACYLAAKKAVEKARRGEGPTLIEA 245 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHN-KWASEGDLKEIEMNVR 337 +TYR H+ + DP+ YR +E+ EM DPI ++R LL W+ E D K + Sbjct: 246 VTYRIGPHTTADDPSRYRDDKEV-EMWRRRDPITRLRSHLLRRGLWSMEEDEK-LWRTTE 303 Query: 338 KIINNSVEFAQSDKEPDPAELYSDI 362 + I ++E + ++ P + D+ Sbjct: 304 QTIQKTIEECEKNRPLPPESILEDV 328 >gi|255522413|ref|ZP_05389650.1| branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit) [Listeria monocytogenes FSL J1-175] Length = 325 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 7/309 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGH 114 Y ML+ RR +E+ L G + F GQE +G + + D + YR+ Sbjct: 11 YETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYALPYYRDLAV 69 Query: 115 ILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +LA G+ A IM + + S G+ H N V Q GI A Sbjct: 70 VLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLA 129 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K + G+G++NQG +E N A++ L V++VI NNQYA+ S+ A Sbjct: 130 AKMAGDEIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQYAISVPASKQYAAE 189 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-SMSDP 292 S R + + IPG +VDG ++ V A +A R +GP +IE ++YR+ H S D Sbjct: 190 KLSDRAIGYGIPGERVDGTNMGEVYAAFKRAADRARNGEGPTLIETVSYRFTPHSSDDDD 249 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD-- 350 ++YR+REE++E + DP++ + LL + +E + EIE ++ K +N + ++A+S Sbjct: 250 SSYRSREEVDEAKGK-DPLKIFQAELLEEGYLTEEKIAEIEKSIAKEVNEATDYAESAAY 308 Query: 351 KEPDPAELY 359 EP+ + LY Sbjct: 309 AEPESSLLY 317 >gi|296419013|ref|XP_002839119.1| hypothetical protein [Tuber melanosporum Mel28] gi|295635114|emb|CAZ83310.1| unnamed protein product [Tuber melanosporum] Length = 450 Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 82/285 (28%), Positives = 139/285 (48%), Gaps = 1/285 (0%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 F + G+E + VG +L D + + YRE G ++ G + M +L + KG Sbjct: 129 SFYMVSAGEEGIAVGSAAALAPDDVIFSQYREQGVMMYRGFTLDEFMNQLFANKFDYGKG 188 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + +H S + + + Q+ G A+A K +S +I V FG+GAA++G + Sbjct: 189 RNMPIHYMSERLHMHPISSPLATQIPHSVGAAYALKLDQSSRIVVCFFGEGAASEGDFHA 248 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 + NIAA + V+++ NN +A+ T + RGV + I +VDG DI AV+ Sbjct: 249 ALNIAATRSCPVVFICRNNGFAISTPTLEQYKGDGIASRGVGYGIDTARVDGNDIMAVRE 308 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRL 318 +A + P++IE ++YR HS SD + YR + E+ + + +PI ++RK L Sbjct: 309 VTMRARDIALKEQKPVLIEAMSYRVSHHSTSDDSFAYRAKIEVEDWKRRDNPITRMRKWL 368 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 W S +E+ VRK I + A+ +K+P L+ D+ Sbjct: 369 ESKSWWSSEQDQELRTQVRKDILKAFARAEKEKKPALENLFLDVF 413 >gi|254283946|ref|ZP_04958914.1| 2-oxoisovalerate dehydrogenase subunit alpha [gamma proteobacterium NOR51-B] gi|219680149|gb|EED36498.1| 2-oxoisovalerate dehydrogenase subunit alpha [gamma proteobacterium NOR51-B] Length = 412 Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 88/281 (31%), Positives = 139/281 (49%), Gaps = 5/281 (1%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G + + + E+ + R M+ +R ++E+ ++ G + F C G+EAV V M+L Sbjct: 67 GDWLPDLSVERLIEGLRHMMHVRAYDERMFRMQRQGQLS-FYVKCTGEEAVAVAQAMALN 125 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG-FYGGHGI 159 GD + +YR+ G + G +M KG+ + +S K G F+ G Sbjct: 126 PGDMLFPSYRQQGLLFVRGRSVVDMMCHCISNARDNLKGRQMPV-FYSWKEGNFFSISGN 184 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + Q S G A A+ Y+ + I GDG+ + V+ + AA + V+ + NNQ Sbjct: 185 LATQYSQAAGWAMASAYKGEEHIASAWVGDGSTAEADVHYAMLFAATYKAPVLLNVVNNQ 244 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+ T S AS T F+ RG+ ++IP ++VDG D AV A + A R GP IE Sbjct: 245 WAISTPQSFASTGTTFAARGIGYHIPSVRVDGNDFLAVYAVTEWAAERARQGHGPTFIEH 304 Query: 280 LTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLL 319 TYR GHS SD PA YR +E + DPI ++++ L+ Sbjct: 305 FTYRAEGHSTSDNPAGYRAEDEAR-LWPLGDPIARLKQHLI 344 >gi|271963735|ref|YP_003337931.1| dehydrogenase, E1 component, alpha and subunit betas [Streptosporangium roseum DSM 43021] gi|270506910|gb|ACZ85188.1| dehydrogenase, E1 component, alpha and beta subunits [Streptosporangium roseum DSM 43021] Length = 307 Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 78/230 (33%), Positives = 118/230 (51%), Gaps = 5/230 (2%) Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 +R FE K +LYG G + G H C+GQE V V ++ L D + + +R HGH L+ D Sbjct: 24 VRHFELKLLELYGRGELNGTTHTCLGQEYVPVALRPLLGPADHVFSNHRGHGHYLSTFRD 83 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 ++AE+ GR+G + G GGS H+ + Y G+ G + + G+A K Sbjct: 84 PHGLLAEIMGREGAVCGGVGGSQHIHRDR---YMSTGVQGESLPVAAGVALHLKRTEPGT 140 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 + V GDG +G VYE+ N+AALW L ++ V+ENN A T + A T R + Sbjct: 141 LACVYIGDGTWGEGAVYEALNLAALWELPLLVVVENNGIAQSTPTASQMAGT-VGSRAAA 199 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 F I V D+ ++A + VA R + P+++E +T+R HS D Sbjct: 200 FGIRHHLVVSTDVNEIRAALTPLVAGVRRAR-PLVVEFVTHRLGPHSKGD 248 >gi|89901282|ref|YP_523753.1| twin-arginine translocation pathway signal protein [Rhodoferax ferrireducens T118] gi|89346019|gb|ABD70222.1| Twin-arginine translocation pathway signal [Rhodoferax ferrireducens T118] Length = 407 Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 98/296 (33%), Positives = 139/296 (46%), Gaps = 25/296 (8%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEG---DQMITAYREH---GHILACGVDASKIMAELTGRQ 133 G+ H GQEAV G+ +L DQ+ Y H GH +A GVD K+ AE R Sbjct: 92 GYNHFYAGQEAVATGVCAALNNKGPFDQLDLVYSTHRPTGHAIAKGVDMKKMAAENDFRA 151 Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 G++ G GG MH+ GF G G++G + TG AFA + R S ++ VV GDG Sbjct: 152 TGLNGGYGGEMHLSDKSCGFIGADGMIGPGHVIATGSAFAFRARDSKQVAVVFGGDGTYA 211 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 + + N AAL L IYV+ENN Y S + + + ++ IPG+ VDG D Sbjct: 212 TPHFHSALNNAALLKLPFIYVLENNLYHQYAHYSYSCPMKDIADAARTYRIPGVVVDGQD 271 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-------------DP---ANYRT 297 + V M AV RA GP +IE TYRY H + DP +++R Sbjct: 272 VFQVYNVMKTAVDRARAGDGPTLIEAKTYRYYNHWGAPGAEAGQLGAFGYDPLAISSFRP 331 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 E+ DP++ R L++ + EIE +K ++ FA +DK+P Sbjct: 332 EREVRAWM-QRDPVDICRNILVNWGVLTRARADEIEAAAKKEAIDA--FAWADKQP 384 >gi|159899110|ref|YP_001545357.1| 3-methyl-2-oxobutanoate dehydrogenase [Herpetosiphon aurantiacus ATCC 23779] gi|159892149|gb|ABX05229.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Herpetosiphon aurantiacus ATCC 23779] Length = 324 Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 91/316 (28%), Positives = 145/316 (45%), Gaps = 5/316 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQ 104 E ++ + L+ Y M+L R +E+ QL G F C G EA VG ++ + D Sbjct: 4 ERDQTRLLAMYHTMVLARSLDERMWQLNRQGK-APFVISCQGHEAAQVGAAFAMRPKHDW 62 Query: 105 MITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ +LA G+ ++M L + + S G+ H G Q Sbjct: 63 IVPYYRDLAMMLAMGMTPREVMLGLLAKAEDPSSGGRQMPAHYSHRALNIVSHSSPTGTQ 122 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V G+A + R D + FG+G ++QG V+E+ N+A + L VI+ ENN YA+ Sbjct: 123 VPHAVGVAMGAQMRGDDIVVWTAFGEGTSSQGDVHEAMNLAGVMKLPVIFFCENNGYAIS 182 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + N S RG + PG+ VDG ++ V M AV R GP +IE R Sbjct: 183 VPQHKQMGVENVSDRGPGYGFPGITVDGTNVLEVYEAMTAAVERARRGDGPTLIEAKCVR 242 Query: 284 YRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 HS D YR+ E+I MR+ DPI L + + I +++I+N+ Sbjct: 243 LTAHSSDDNDRTYRSPEDIKAMRTR-DPIASFEHFLRDEGMLDDAKVAAIRAEIKEIVND 301 Query: 343 SVEFAQSDKEPDPAEL 358 + +A++ PDP+ + Sbjct: 302 ATAYAEAAPLPDPSTV 317 >gi|311112275|ref|YP_003983497.1| pyruvate dehydrogenase complex E1 component subunit alpha [Rothia dentocariosa ATCC 17931] gi|310943769|gb|ADP40063.1| pyruvate dehydrogenase complex E1 component alpha subunit [Rothia dentocariosa ATCC 17931] Length = 348 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 81/312 (25%), Positives = 158/312 (50%), Gaps = 14/312 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 ++A+ M+ R F ++A L G +G + +GQEA V ++L D + YR+ Sbjct: 22 ITAHAAMIAGRHFNQQASNLAKQGYMGAYPS-SLGQEACQVAAALALEPADWLFPTYRDS 80 Query: 113 GHILACGVDASKIMAELTGRQG-GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 +++ G+D +++++ G G + K + +T + H + G+A Sbjct: 81 VAVMSRGIDLAEVLSPFHGSSHCGYAPTKTHTAPE-ATPLATHTAHAV---------GLA 130 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A K+ + + GDG+ ++G +E+ N+AA++ V+++++NN YA+ T VSR Sbjct: 131 MAAKFAGDSTVALAMCGDGSTSEGDFHEALNLAAVFEAPVVFLVQNNGYAISTPVSRQMR 190 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + + +G + +P +VDG D V + +AV RA GP +IE +TYR H+ SD Sbjct: 191 AASIAAKGEGYGMPAYRVDGNDFEQVYPRLHEAVERARAGGGPTLIEAMTYRMGPHTTSD 250 Query: 292 -PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 P YR+REE+ + R DP+ +++ ++ ++ ++ + KI + + Sbjct: 251 NPDRYRSREEVEQWRGR-DPLTRIQHQMYQRLPNAKTHIENAILAAEKIASEARTSMMQL 309 Query: 351 KEPDPAELYSDI 362 + PDP +L++ + Sbjct: 310 QMPDPQDLFAHV 321 >gi|296333441|ref|ZP_06875894.1| branched-chain alpha-keto acid dehydrogenase E1 subunit [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675053|ref|YP_003866725.1| branched-chain alpha-keto acid dehydrogenase E1 subunit [Bacillus subtilis subsp. spizizenii str. W23] gi|296149639|gb|EFG90535.1| branched-chain alpha-keto acid dehydrogenase E1 subunit [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413297|gb|ADM38416.1| branched-chain alpha-keto acid dehydrogenase E1 subunit [Bacillus subtilis subsp. spizizenii str. W23] Length = 330 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 151/308 (49%), Gaps = 9/308 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 ++ + YR MLL R+ +E+ L G + F C GQEA VG +L E D + Sbjct: 11 LTDQEAVDMYRTMLLARKIDERMWLLNRSGKIP-FVISCQGQEAAQVGAAFALDREMDYV 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGA 162 + YR+ G +LA G+ A +M ++G GG H KN G V Sbjct: 70 LPYYRDMGVVLAFGMTAKDLM--MSGFAKAADPNSGGRQMPGHFGQKKNRIVTGSSPVTT 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV GIA A + + D V FG+G++NQG +E N AA+ L VI++ ENN+YA+ Sbjct: 128 QVPHAVGIALAGRMEKKDIAAFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A N S R V + +PG+ V+G D V + +A R +GP +IE ++Y Sbjct: 188 SVPYDKQVACENISDRAVGYGMPGITVNGNDPLEVYQAVKEARERARRGEGPTLIETISY 247 Query: 283 RYRGH-SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R H S D ++YR REE+ E + + DP+ + L S+ + + + I+N Sbjct: 248 RLTPHSSDDDDSSYRGREEVEEAKKS-DPLLTYQAYLKETGLLSDETEQTMLDEIMAIVN 306 Query: 342 NSVEFAQS 349 + + A++ Sbjct: 307 EATDEAEN 314 >gi|289551095|ref|YP_003471999.1| Pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus lugdunensis HKU09-01] gi|315658594|ref|ZP_07911465.1| pyruvate dehydrogenase complex E1 component alpha subunit [Staphylococcus lugdunensis M23590] gi|289180627|gb|ADC87872.1| Pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus lugdunensis HKU09-01] gi|315496383|gb|EFU84707.1| pyruvate dehydrogenase complex E1 component alpha subunit [Staphylococcus lugdunensis M23590] Length = 370 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 153/307 (49%), Gaps = 19/307 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + EQ + M+ R ++++ L G +G F GQEA + + +L + D Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQYALEKED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ ++ A L R G KG + F + I+GAQ Sbjct: 99 FILPGYRDVPQIIWHGLPLTE--AFLFSR--GHFKG-----NQFPEGVNAFSPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+AF K R + + GDG ++QG YE N A+ + I+VI+NN YA+ Sbjct: 150 YIQTAGVAFGIKKRGKKAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A T +++ +S IPG+QVDGMD AV +A A +GP +IE +TYR Sbjct: 210 TPRSKQTAATTLAQKAISVGIPGIQVDGMDPLAVYQATKEARDRAVAGEGPTLIETMTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEM---NV 336 Y H+M+ DP YRT +E E DP+ + RK L NK W + + + IE ++ Sbjct: 270 YGPHTMAGDDPTRYRTSDEDAEW-EKKDPLVRFRK-FLENKGLWNEDKENEVIERAKDDI 327 Query: 337 RKIINNS 343 +K I + Sbjct: 328 KKAIKEA 334 >gi|15805070|ref|NP_293755.1| 2-oxo acid dehydrogenase, E1 component subunit alpha [Deinococcus radiodurans R1] gi|6457688|gb|AAF09621.1|AE001866_8 2-oxo acid dehydrogenase, E1 component, alpha subunit [Deinococcus radiodurans R1] Length = 381 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 95/312 (30%), Positives = 149/312 (47%), Gaps = 7/312 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 +RLML R F+ K L G F G EA +G+ ++ G D + YR+ Sbjct: 49 HRLMLQGREFDRKLITLLRQGRTS-FYSQASGMEATQIGLAKAIRAGHDWVWGYYRDQVL 107 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + GV ++++ G +G+ H S + F + +QV G A A Sbjct: 108 GMGLGVPMFTLISQCLGSNTDECRGRQMPHHFSSRAHNFVSASSSIASQVPPAAGNARAQ 167 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY +D+I VV FGDGA ++G + N+A ++V ENNQ+A+ T + +A N Sbjct: 168 KYLGTDEITVVTFGDGATSEGDWHTGMNMAGAMQAPCLFVCENNQWAISTHIRHQTASEN 227 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-- 292 + ++ +PG VDG D+ AV A + RA GP ++E LTYR HS +D Sbjct: 228 IHIKAKAYGMPGFYVDGNDVVAVMEVCHHAAEWVRAGNGPALVECLTYRVGSHSNADADA 287 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 +YRTR+E+NE DPI++V L H S + + + K I++ V A++ Sbjct: 288 EKSYRTRDEVNEWLGR-DPIQRVENLLEHLGDPISAEERAGMIAEIHKQIDDDVRRAEAA 346 Query: 351 KEPDPAELYSDI 362 PD ++ D+ Sbjct: 347 GYPDWRIMFEDV 358 >gi|256618933|ref|ZP_05475779.1| pyruvate dehydrogenase [Enterococcus faecalis ATCC 4200] gi|256598460|gb|EEU17636.1| pyruvate dehydrogenase [Enterococcus faecalis ATCC 4200] Length = 371 Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 89/312 (28%), Positives = 152/312 (48%), Gaps = 15/312 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + E+ + M+ R ++++ L G +G F GQEA + + ++ + D Sbjct: 41 VPDLSDEELVELMTRMVWSRVLDQRSTALNRQGRLGFFAPTA-GQEASQLASQFAMEKED 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + G G + ++ I+GAQ Sbjct: 100 YLLPGYRDVPQLVQHGLPLREAFLWSRGHVAG---------NYYAEDLNALPPQIIIGAQ 150 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K R + + GDG ++QG YE+ N A + N +++I+NN +A+ Sbjct: 151 YIQAAGVALGLKKRGKENVVFTYTGDGGSSQGDFYEAINFAGAYQANGVFIIQNNGFAIS 210 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + +A +++ V+ IPG+QVDGMD AV A +A + A GP++IE LTYR Sbjct: 211 TPREKQTAAKTLAQKAVAAGIPGIQVDGMDPLAVYAIAKEARDWSAAGNGPVLIETLTYR 270 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 Y H++S DP YR++ E+++ DP+ + RK L SE KEI ++ I Sbjct: 271 YGPHTLSGDDPTRYRSK-EMDDEWVQKDPLTRFRKYLTDKGLWSEAKEKEIIEKTKEEIK 329 Query: 342 NSVEFAQSDKEP 353 V A++DK P Sbjct: 330 --VAIAEADKAP 339 >gi|47093759|ref|ZP_00231509.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Listeria monocytogenes str. 4b H7858] gi|254852581|ref|ZP_05241929.1| 2-oxoisovalerate dehydrogenase E1 component [Listeria monocytogenes FSL R2-503] gi|300766392|ref|ZP_07076349.1| 2-oxoisovalerate dehydrogenase E1 component [Listeria monocytogenes FSL N1-017] gi|47017880|gb|EAL08663.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Listeria monocytogenes str. 4b H7858] gi|258605893|gb|EEW18501.1| 2-oxoisovalerate dehydrogenase E1 component [Listeria monocytogenes FSL R2-503] gi|300512896|gb|EFK39986.1| 2-oxoisovalerate dehydrogenase E1 component [Listeria monocytogenes FSL N1-017] gi|328467510|gb|EGF38579.1| branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit) [Listeria monocytogenes 1816] Length = 331 Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 7/309 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGH 114 Y ML+ RR +E+ L G + F GQE +G + + D + YR+ Sbjct: 17 YETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYALPYYRDLAV 75 Query: 115 ILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +LA G+ A IM + + S G+ H N V Q GI A Sbjct: 76 VLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLA 135 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K + G+G++NQG +E N A++ L V++VI NNQYA+ S+ A Sbjct: 136 AKMAGDEIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQYAISVPASKQYAAE 195 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-SMSDP 292 S R + + IPG +VDG ++ V A +A R +GP +IE ++YR+ H S D Sbjct: 196 KLSDRAIGYGIPGERVDGTNMGEVYAAFKRAADCARNGEGPTLIETVSYRFTPHSSDDDD 255 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD-- 350 ++YR+REE++E + DP++ + LL + +E + EIE ++ K +N + ++A+S Sbjct: 256 SSYRSREEVDEAKGK-DPLKIFQAELLEEGYLTEEKIAEIEKSIAKEVNEATDYAESAAY 314 Query: 351 KEPDPAELY 359 EP+ + LY Sbjct: 315 AEPESSLLY 323 >gi|269925214|ref|YP_003321837.1| 3-methyl-2-oxobutanoate dehydrogenase (2- methylpropanoyl-transferring) [Thermobaculum terrenum ATCC BAA-798] gi|269788874|gb|ACZ41015.1| 3-methyl-2-oxobutanoate dehydrogenase (2- methylpropanoyl-transferring) [Thermobaculum terrenum ATCC BAA-798] Length = 344 Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 94/314 (29%), Positives = 145/314 (46%), Gaps = 11/314 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI---GQEAVIVGMKMSLTEG-DQMITAYRE 111 YRLM+L R +E+ L G V H I GQE +G +L G D + YR+ Sbjct: 31 YRLMVLARTLDERMWILNRQGKV----HFVISGQGQEGAQIGTAYALRPGVDFFVPYYRD 86 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGI 170 L GV +IM L R + G +S K G + Q+ GI Sbjct: 87 LTVCLYAGVTPREIMLSLFARADDPASGGRQMPGHYSYKPLKIVTGSSPIATQIPHAVGI 146 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A+K + D + V FG+ A+++G +E N A + VI++ ENN YA+ ++ Sbjct: 147 ALASKIKNEDVVTAVWFGEAASSKGDFHEGLNFAGVIKAPVIFICENNHYAISVPQNKQM 206 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM- 289 A N + + ++ PG+ DG D+ V M AV RA +GP +IE TYR HS Sbjct: 207 AVPNVADKACAYGFPGVVTDGNDVLDVYKAMKAAVERARAGEGPTLIECKTYRIVPHSSD 266 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + YRT+ E+ E + PIE++R + SE +++ I++++ FA+ Sbjct: 267 DDESRYRTKVEVEEWK-RKGPIERLRTYMQAQGIWSEEFENQVKSEALSIVDDATRFAEQ 325 Query: 350 DKEPDPAELYSDIL 363 P P+ L + Sbjct: 326 ASPPSPSSLLRHVF 339 >gi|218289426|ref|ZP_03493660.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Alicyclobacillus acidocaldarius LAA1] gi|218240532|gb|EED07713.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Alicyclobacillus acidocaldarius LAA1] Length = 359 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 89/301 (29%), Positives = 150/301 (49%), Gaps = 19/301 (6%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++A +L G +G + + GQEA ++G + + + D ++ YR+ + Sbjct: 44 MVFTRIWDQRAIRLSRQGRLGFYAPVS-GQEASMIGSEFATKKEDFLLPGYRDIPQLYFH 102 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G ++ G Q G +G + + I+GAQ+ G+ A K R Sbjct: 103 GYPLHQLFLYSRGHQLGGKVPEGVNCMVPQI---------IIGAQIVQAAGVGLAFKLRG 153 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ V GDG +QG YE N A NL V++ ++NNQYA+ + +++ Sbjct: 154 EKRVAVTYTGDGGTSQGDFYEGMNFAGAMNLPVVFFVQNNQYAISVPRELQTRAQTLAQK 213 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 ++ IPG+QVDGMD+ AV M +AV R +GP +IE +T+RY H+MS DP YR Sbjct: 214 AIAAGIPGVQVDGMDVLAVYHVMHEAVERARNGEGPTMIEAVTFRYGPHTMSGDDPTRYR 273 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 T+ ++ E DP+ + RK L S+ + + ++ +NN++ KE D A Sbjct: 274 TK-DVQEEWEKKDPLIRFRKYLEEKGLWSQEEEEAYIEEAKETVNNAL------KEADAA 326 Query: 357 E 357 E Sbjct: 327 E 327 >gi|327439773|dbj|BAK16138.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component, eukaryotic type, alpha subunit [Solibacillus silvestris StLB046] Length = 337 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 145/306 (47%), Gaps = 5/306 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 E+ L Y ML+ RR +E+ L G + F C GQEA VG +L D + Sbjct: 14 LTDEEVLKMYETMLMARRIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDHTKDYI 72 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 YR+ G +L G+ A +M + + S G+ H KN G V QV Sbjct: 73 APYYRDMGVVLHFGMTAKDLMLSAFAKAEDPNSGGRQMPGHFGQKKNRILTGSSPVTTQV 132 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G+A A K ++ D I V G+G++NQG +E N A + L VI ++ENNQYA+ Sbjct: 133 PHAVGVALAGKMQQKDFITFVTLGEGSSNQGDFHEGANFAGVHKLPVIIMVENNQYAISV 192 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 V R S R + + +PG+ VDG + V + +A R +GP +IE +++R Sbjct: 193 PVERQLGCAQVSDRAIGYGMPGVTVDGKNPLEVYKVVKEAADRARRGEGPSLIETVSFRL 252 Query: 285 RGHSM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D YRT E+I E ++ DPI L A + L+++ + +N + Sbjct: 253 TAHSSDDDDRQYRTAEDIAEGKAK-DPIILFETYLKDCGVADDALLEQMNKKIMDTVNEA 311 Query: 344 VEFAQS 349 ++A++ Sbjct: 312 TDYAEN 317 >gi|116750074|ref|YP_846761.1| pyruvate dehydrogenase [Syntrophobacter fumaroxidans MPOB] gi|116699138|gb|ABK18326.1| Pyruvate dehydrogenase (acetyl-transferring) [Syntrophobacter fumaroxidans MPOB] Length = 365 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/308 (30%), Positives = 154/308 (50%), Gaps = 17/308 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L R+F+E+ L G +G F + GQEA VG L GD ++ ++RE Sbjct: 41 YRAMVLSRKFDERMLILQRQGRIGTFAPIK-GQEAQ-VGAVALLEPGDWLVPSFREMPAE 98 Query: 116 LACGVDASKIMAELTG-RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + G ++ G +GG + ++ + VG Q G+A+ Sbjct: 99 VWRGKKLENVLLLYAGYNEGGRTPDDLNNLPVSIP----------VGTQTLHAVGLAYGI 148 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KYR+ + + FGDGA ++G +E+ N A+++ + +++ +NN +A+ +R S Sbjct: 149 KYRKGKNVAMAFFGDGATSEGDFHEALNFASVFQVPAVFICQNNHWAISLPRARQSHSKT 208 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 +++ +++++PG+QVDG D+ AV A +AV RA GP IE +TYR H+ + DP Sbjct: 209 LAQKALAYDMPGLQVDGNDVLAVYAAAKEAVDRARAGGGPSFIESVTYRLSMHTTADDPK 268 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE--FAQSDK 351 YR EE+ E DPI + K LL SE + I V+ I + E ++K Sbjct: 269 KYRREEEV-EQWVRRDPIIRFEKYLLGRGLLSEESVAGIADEVQAEIKEAEERWTRMTEK 327 Query: 352 EPDPAELY 359 DP E++ Sbjct: 328 PADPMEMF 335 >gi|258510471|ref|YP_003183905.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477197|gb|ACV57516.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 359 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 90/316 (28%), Positives = 155/316 (49%), Gaps = 19/316 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V E + + + M+ R ++++A +L G +G + + GQEA ++G + + + D Sbjct: 29 VPELSDDDLRELMKRMVFTRIWDQRAIRLSRQGRLGFYAPVS-GQEASMIGSEFATKKED 87 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ + G ++ G Q G +G + + I+GAQ Sbjct: 88 FLLPGYRDIPQLYFHGYPLHQLFLYSRGHQLGGKVPEGVNCMVPQI---------IIGAQ 138 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+ A K R ++ V GDG +QG YE N A NL V++ ++NNQYA+ Sbjct: 139 IVQAAGVGLAFKLRGEKRVAVTYTGDGGTSQGDFYEGMNFAGAMNLPVVFFVQNNQYAIS 198 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + +++ ++ IPG+QVDGMD+ AV M +A+ R +GP +IE +T+R Sbjct: 199 VPRELQTRAQTLAQKAIAAGIPGVQVDGMDVLAVYHVMHEALERARNGEGPTMIEAVTFR 258 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 Y H+MS DP YRT+ ++ E DP+ + RK L S+ + + ++ +N Sbjct: 259 YGPHTMSGDDPTRYRTK-DVQEEWEKKDPLIRFRKYLEEKGLWSQEEEEAYIEEAKETVN 317 Query: 342 NSVEFAQSDKEPDPAE 357 N++ KE D AE Sbjct: 318 NAL------KEADAAE 327 >gi|295706530|ref|YP_003599605.1| 2-oxoisovalerate dehydrogenase E1 component subunit alpha [Bacillus megaterium DSM 319] gi|294804189|gb|ADF41255.1| 2-oxoisovalerate dehydrogenase E1 component alpha subunit [Bacillus megaterium DSM 319] Length = 330 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 94/308 (30%), Positives = 148/308 (48%), Gaps = 9/308 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 EQ L YR MLL R+ +E+ L G V F C GQEA VG +L E D + Sbjct: 11 LTDEQVLEMYRTMLLARKIDERMWLLNRAGKVP-FVISCQGQEAAQVGAAFALNRENDYI 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGA 162 + YR+ G +LA G+ A +M L+G GG H + G V Sbjct: 70 LPYYRDLGVVLAFGMTARDLM--LSGFAKAEDPNSGGRQMPGHFGHKEKRIVTGSSPVTT 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV GIA A + + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 128 QVPHAVGIALAGRLEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 V + S R + + +PG +DG D+ V + +A +GP +IE ++ Sbjct: 188 SVPVEKQLGCAKVSDRAIGYGMPGYTIDGNDVLEVYRVVKEARDRASRGEGPTLIETVSE 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D YR EE++E + + DP+ L ++ K++ ++ I+N Sbjct: 248 RLTAHSSDDDDRAYRGAEELSEAKKS-DPLAYFATYLKEVNVLTDEREKQMLDDIMNIVN 306 Query: 342 NSVEFAQS 349 ++ ++A++ Sbjct: 307 DATDYAEN 314 >gi|257067260|ref|YP_003153515.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Brachybacterium faecium DSM 4810] gi|256558078|gb|ACU83925.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Brachybacterium faecium DSM 4810] Length = 378 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 97/312 (31%), Positives = 153/312 (49%), Gaps = 19/312 (6%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M +IR +E+A L G +G + L GQEA +G+ +L + + T+YRE+G Sbjct: 51 YLDMSVIRAIDEEAVALQRQGELGLWPPLH-GQEAAQIGLGRALDATEFLFTSYRENGLA 109 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GV +++A R +S + HM + + I+GAQ G A A + Sbjct: 110 WCRGVSPEEMLA--VWRGTALSGWDPFTHHMATPQV-------IIGAQAHHAVGYAMAAR 160 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R D+I V CFGDGA +QG V E+ AA + V++ +NN YA+ V+ A Sbjct: 161 ARGGDEIAVACFGDGALSQGDVNEALAFAASFRAPVLFFCQNNHYAISEPVA-VQATVPL 219 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + R F IP ++VDG D+ AV+A A + R +GPI +E +TYR H+ S DP Sbjct: 220 ALRPTGFGIPALRVDGNDVLAVRAASRIAARHLREGRGPIFLEAVTYRLGPHTTSDDPTR 279 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASE---GDLKEIEMNVRKIINNSVEFAQSDK 351 YR +E+ R P+ +V + L ++E G+ + + R + +V + Sbjct: 280 YRDEQELETWRGRC-PLRRVERHLAQLGASAEELRGEAQRRGADARTALREAV---TALP 335 Query: 352 EPDPAELYSDIL 363 P P L+ ++L Sbjct: 336 APAPESLFENVL 347 >gi|317016911|gb|ADU85984.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Dactylosporangium aurantiacum subsp. hamdenensis] Length = 353 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 91/301 (30%), Positives = 146/301 (48%), Gaps = 15/301 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M L RRF+++A L G +G + + +GQEA VG ++ D + +YREH Sbjct: 30 HRDMFLARRFDQEALALQRQGELGLWL-MALGQEAAQVGSIRAVAAHDHVFPSYREHAAA 88 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G+ ++I+A+ G H++S ++GAQ TG A + Sbjct: 89 LCRGISPAEILAQWRGVAHSGWDPARYRFHIYSL---------VLGAQALHATGYAVGVR 139 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + ++ + FGDGA++QG V E+ N A + +++ +NNQ+A+ T ++ T Sbjct: 140 LDGAQEVVLAYFGDGASSQGDVNEALNWAVVARAPIVFFCQNNQWAISTGTAQQMG-TPV 198 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 R F + VDG D+ AV A +A RA P++IE TYR GHS S DP Sbjct: 199 HVRAAGFGLDTYFVDGNDVLAVHAVTAQAADRVRAGGPPVLIEAFTYRIAGHSTSDDPRI 258 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR+ E++ R DP+ ++ L WA E ++++ RK+ + A PD Sbjct: 259 YRSEAEVDLWRER-DPVARLTTLLRAEGWADEEHFEQLDREARKLAEETR--AACLSLPD 315 Query: 355 P 355 P Sbjct: 316 P 316 >gi|302529578|ref|ZP_07281920.1| pyruvate dehydrogenase E1 component alpha subunit [Streptomyces sp. AA4] gi|302438473|gb|EFL10289.1| pyruvate dehydrogenase E1 component alpha subunit [Streptomyces sp. AA4] Length = 366 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 88/311 (28%), Positives = 153/311 (49%), Gaps = 12/311 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M+ RRF+ +A L G + + GQEA +G ++L D + YR+ Sbjct: 43 LRLYRGMVSGRRFDTQATALTKQGRLAVYPS-ARGQEAAEIGSILALRPQDWLFPTYRDS 101 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 ++A GVD +++ L G ++ T H + G A Sbjct: 102 MAVVARGVDPVEVLTLLRGDWHCGYDPYRANVAPQCTPLATNTLHAV---------GFAH 152 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + + D + +V GDGA ++G +E+ N AA+W V+++++NN YA+ + + +A Sbjct: 153 AARVKGEDTVSLVLVGDGATSEGDTHEALNFAAVWKAPVVFLVQNNGYAISVPLEKQTAA 212 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + + +GV + +P + VDG D AV A +++AVA A +GP +IE +TYR H+ +D Sbjct: 213 PSLAYKGVGYGMPSVLVDGNDAAAVHAVVEQAVARAAAGEGPTLIEAVTYRMESHTNADD 272 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 A YR + E+ + + DPI ++++ L + +EI+ + E D Sbjct: 273 ATRYREKAEVEQWLT-RDPISRLKQYLTDRGLLDDKAQQEIDARAEEEAAALRERMNVDT 331 Query: 352 EPDPAELYSDI 362 E DPA+L+ + Sbjct: 332 ELDPADLFRHV 342 >gi|15924083|ref|NP_371617.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus Mu50] gi|21282705|ref|NP_645793.1| pyrubate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus MW2] gi|29165620|ref|NP_808209.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus N315] gi|49485931|ref|YP_043152.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus MSSA476] gi|57651702|ref|YP_185966.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Staphylococcus aureus subsp. aureus COL] gi|87160754|ref|YP_493691.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194792|ref|YP_499589.1| pyruvate dehydrogenase complex, E1 component subunit alpha [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267586|ref|YP_001246529.1| pyruvate dehydrogenase (acetyl-transferring) [Staphylococcus aureus subsp. aureus JH9] gi|150393641|ref|YP_001316316.1| pyruvate dehydrogenase (acetyl-transferring) [Staphylococcus aureus subsp. aureus JH1] gi|151221171|ref|YP_001331993.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|156979416|ref|YP_001441675.1| pyrubate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus Mu3] gi|161509276|ref|YP_001574935.1| pyruvate dehydrogenase (acetyl-transferring) alpha subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140507|ref|ZP_03565000.1| pyruvate dehydrogenase (acetyl-transferring) alpha subunit [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253316346|ref|ZP_04839559.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731704|ref|ZP_04865869.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733672|ref|ZP_04867837.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus TCH130] gi|255005880|ref|ZP_05144481.2| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795176|ref|ZP_05644155.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus A9781] gi|258407115|ref|ZP_05680264.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus A9763] gi|258421793|ref|ZP_05684714.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus A9719] gi|258436157|ref|ZP_05689140.1| pyruvate dehydrogenase E1 component [Staphylococcus aureus A9299] gi|258443354|ref|ZP_05691697.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus A8115] gi|258444964|ref|ZP_05693281.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus A6300] gi|258449861|ref|ZP_05697959.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus A6224] gi|258451960|ref|ZP_05699976.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus A5948] gi|258454960|ref|ZP_05702923.1| pyruvate dehydrogenase complex E1 component [Staphylococcus aureus A5937] gi|262052201|ref|ZP_06024407.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus 930918-3] gi|269202704|ref|YP_003281973.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Staphylococcus aureus subsp. aureus ED98] gi|282894120|ref|ZP_06302351.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus A8117] gi|282916343|ref|ZP_06324105.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus D139] gi|282925277|ref|ZP_06332934.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus A9765] gi|282928615|ref|ZP_06336212.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus A10102] gi|283770155|ref|ZP_06343047.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus subsp. aureus H19] gi|284024018|ref|ZP_06378416.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Staphylococcus aureus subsp. aureus 132] gi|294848082|ref|ZP_06788829.1| pyruvate dehydrogenase E1 component [Staphylococcus aureus A9754] gi|296276494|ref|ZP_06859001.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus MR1] gi|297208269|ref|ZP_06924699.1| pyruvate dehydrogenase complex E1 component alpha subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912346|ref|ZP_07129789.1| pyruvate dehydrogenase complex E1 component alpha subunit [Staphylococcus aureus subsp. aureus TCH70] gi|304381349|ref|ZP_07364002.1| pyruvate dehydrogenase complex E1 component alpha subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|38604706|sp|P60089|ODPA_STAAM RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|38604707|sp|P60090|ODPA_STAAW RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|38604754|sp|Q820A6|ODPA_STAAN RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|60390425|sp|Q6GAC1|ODPA_STAAS RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|81694756|sp|Q5HGZ1|ODPA_STAAC RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|14246863|dbj|BAB57255.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus Mu50] gi|21204143|dbj|BAB94841.1| pyrubate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus MW2] gi|27597251|dbj|BAC55165.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus N315] gi|49244374|emb|CAG42802.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus MSSA476] gi|57285888|gb|AAW37982.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Staphylococcus aureus subsp. aureus COL] gi|87126728|gb|ABD21242.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202350|gb|ABD30160.1| pyruvate dehydrogenase complex, E1 component, alpha subunit, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740655|gb|ABQ48953.1| Pyruvate dehydrogenase (acetyl-transferring) [Staphylococcus aureus subsp. aureus JH9] gi|149946093|gb|ABR52029.1| Pyruvate dehydrogenase (acetyl-transferring) [Staphylococcus aureus subsp. aureus JH1] gi|150373971|dbj|BAF67231.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|156721551|dbj|BAF77968.1| pyrubate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus Mu3] gi|160368085|gb|ABX29056.1| pyruvate dehydrogenase (acetyl-transferring) alpha subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724518|gb|EES93247.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728372|gb|EES97101.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus TCH130] gi|257789148|gb|EEV27488.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus A9781] gi|257841270|gb|EEV65715.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus A9763] gi|257842126|gb|EEV66554.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus A9719] gi|257848846|gb|EEV72831.1| pyruvate dehydrogenase E1 component [Staphylococcus aureus A9299] gi|257851444|gb|EEV75383.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus A8115] gi|257856086|gb|EEV79004.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus A6300] gi|257856781|gb|EEV79684.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus A6224] gi|257860175|gb|EEV83007.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus A5948] gi|257862840|gb|EEV85605.1| pyruvate dehydrogenase complex E1 component [Staphylococcus aureus A5937] gi|259159872|gb|EEW44910.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus 930918-3] gi|262074994|gb|ACY10967.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Staphylococcus aureus subsp. aureus ED98] gi|269940588|emb|CBI48967.1| putative pyruvate dehydrogenase E1 component,alpha subunit [Staphylococcus aureus subsp. aureus TW20] gi|282319783|gb|EFB50131.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus D139] gi|282589654|gb|EFB94740.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus A10102] gi|282592553|gb|EFB97563.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus A9765] gi|282763606|gb|EFC03735.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus A8117] gi|283460302|gb|EFC07392.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus subsp. aureus H19] gi|285816774|gb|ADC37261.1| Pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus 04-02981] gi|294824882|gb|EFG41304.1| pyruvate dehydrogenase E1 component [Staphylococcus aureus A9754] gi|296887008|gb|EFH25911.1| pyruvate dehydrogenase complex E1 component alpha subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|298694328|gb|ADI97550.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus ED133] gi|300886592|gb|EFK81794.1| pyruvate dehydrogenase complex E1 component alpha subunit [Staphylococcus aureus subsp. aureus TCH70] gi|302332703|gb|ADL22896.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus JKD6159] gi|302750917|gb|ADL65094.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340332|gb|EFM06273.1| pyruvate dehydrogenase complex E1 component alpha subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312829487|emb|CBX34329.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130321|gb|EFT86308.1| pyruvate dehydrogenase (acetyl-transferring) alpha subunit [Staphylococcus aureus subsp. aureus CGS03] gi|315196123|gb|EFU26480.1| pyruvate dehydrogenase (acetyl-transferring) alpha subunit [Staphylococcus aureus subsp. aureus CGS01] gi|320141091|gb|EFW32938.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus MRSA131] gi|320143148|gb|EFW34938.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus MRSA177] gi|323440642|gb|EGA98352.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus O11] gi|323441669|gb|EGA99315.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus O46] gi|329313761|gb|AEB88174.1| Pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus subsp. aureus T0131] gi|329725164|gb|EGG61653.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus 21172] gi|329728742|gb|EGG65163.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus 21193] gi|329730761|gb|EGG67140.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus 21189] Length = 370 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 147/294 (50%), Gaps = 16/294 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + EQ + M+ R ++++ L G +G F GQEA + + +L + D Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQYALEKED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ ++ A L R G KG + F I+GAQ Sbjct: 99 YILPGYRDVPQIIWHGLPLTE--AFLFSR--GHFKG-----NQFPEGVNALSPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+AFA K R + + + GDG ++QG YE N AA + I+VI+NN YA+ Sbjct: 150 YIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A +++ ++ IPG+QVDGMD AV +A A +GP +IE +TYR Sbjct: 210 TPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIE 333 Y H+M+ DP YRT +E E DP+ + RK L NK W + + + IE Sbjct: 270 YGPHTMAGDDPTRYRTSDEDAEW-EKKDPLVRFRK-FLENKGLWNEDKENEVIE 321 >gi|295405897|ref|ZP_06815706.1| pyruvate dehydrogenase E1 component [Staphylococcus aureus A8819] gi|297246367|ref|ZP_06930211.1| pyruvate dehydrogenase E1 component [Staphylococcus aureus A8796] gi|294969332|gb|EFG45352.1| pyruvate dehydrogenase E1 component [Staphylococcus aureus A8819] gi|297176733|gb|EFH35993.1| pyruvate dehydrogenase E1 component [Staphylococcus aureus A8796] Length = 370 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 147/294 (50%), Gaps = 16/294 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + EQ + M+ R ++++ L G +G F GQEA + + +L + D Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQYALEKED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ ++ A L R G KG + F I+GAQ Sbjct: 99 YILPGYRDVPQIIWHGLPLTE--AFLFSR--GHFKG-----NQFPEGVNALSPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+AFA K R + + + GDG ++QG YE N AA + I+VI+NN YA+ Sbjct: 150 YIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A +++ ++ IPG+QVDGMD AV +A A +GP +IE +TYR Sbjct: 210 TPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIE 333 Y H+M+ DP YRT +E E DP+ + RK L NK W + + + IE Sbjct: 270 YGPHTMAGDDPTRYRTSDEDAEWEK-KDPLVRFRK-FLENKGLWNEDKENEVIE 321 >gi|308174193|ref|YP_003920898.1| branched-chain alpha-keto acid dehydrogenase E1 subunit [Bacillus amyloliquefaciens DSM 7] gi|307607057|emb|CBI43428.1| branched-chain alpha-keto acid dehydrogenase E1 subunit [Bacillus amyloliquefaciens DSM 7] gi|328554137|gb|AEB24629.1| branched-chain alpha-keto acid dehydrogenase E1 subunit [Bacillus amyloliquefaciens TA208] gi|328912528|gb|AEB64124.1| branched-chain alpha-keto acid dehydrogenase E1 subunit [Bacillus amyloliquefaciens LL3] Length = 330 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 149/305 (48%), Gaps = 9/305 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGH 114 YR MLL R+ +E+ L G + F C GQEA VG +L + D ++ YR+ G Sbjct: 20 YRTMLLARKIDERMWLLNRSGKIP-FVISCQGQEAAQVGAAYALNRDTDYVLPYYRDMGV 78 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGAQVSLGTGIA 171 +LA G+ A +M ++G GG H KN G V QV GIA Sbjct: 79 VLAFGMTAKDLM--MSGFAKAADPNSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGIA 136 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A + + D + V FG+G++NQG +E N AA+ L VI++ ENN+YA+ R A Sbjct: 137 LAGRMDKKDIVSFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAISVPYDRQVA 196 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-SMS 290 N S R V + +PG+ VDG D+ V + +A +GP +IE ++YR H S Sbjct: 197 CENISDRAVGYGMPGVTVDGNDLLEVYQAVKEARERASKGEGPTLIETVSYRLTPHSSDD 256 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 D ++YR R+E+ E + DP+ + L E + K + ++ I+N + + A+ Sbjct: 257 DDSSYRERKEVEEAK-KQDPLLIYKAYLQEAGLLGEEEEKAMLDDIMAIVNEATDEAEKA 315 Query: 351 KEPDP 355 P Sbjct: 316 PYASP 320 >gi|297562181|ref|YP_003681155.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846629|gb|ADH68649.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 375 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 148/310 (47%), Gaps = 12/310 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 YR M R + +A L G+ + + GQEA V +L D + YRE Sbjct: 56 YRHMRTARDLDTEAIALQRQGVFPAYVSVR-GQEAAQVASASALDPARDFVFPTYREMAS 114 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 LA GV+ MA T R + GG + +++ G + +VG V G A Sbjct: 115 ALAYGVEMVGYMA--THR----ALWHGGLYDVAASRFGAV--NAVVGGPVPHAVGWAVGE 166 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + R D + + FGDGA+++G V+E+ N A ++ V++ +NNQ+A+ R A + Sbjct: 167 RLRGDDGVALAYFGDGASSEGDVHEAMNFAGVFGAPVVFFCQNNQWALSVPNHRQVAGGS 226 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 S R + +PG+ VDG D AV +AVA R +GP +IE LTYR HS S DP Sbjct: 227 VSARAEGYGMPGVLVDGNDAGAVHEATAEAVARARRGEGPTLIEALTYRVEPHSTSDDPG 286 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR E R DP+ +R+ LL A EG+L ++ R+ + + EP Sbjct: 287 RYRDDAEAQRWRER-DPVTLLREALLAAGHADEGELARVDAEARREAERIRDGVATAPEP 345 Query: 354 DPAELYSDIL 363 D +EL++ + Sbjct: 346 DGSELFTHVF 355 >gi|116494931|ref|YP_806665.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Lactobacillus casei ATCC 334] gi|116105081|gb|ABJ70223.1| branched-chain alpha-keto acid dehydrogenase E1 component [Lactobacillus casei ATCC 334] Length = 334 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 89/317 (28%), Positives = 154/317 (48%), Gaps = 9/317 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT---EGD 103 ++E L Y+ ++ RR +E+ L+ + +G F GQ A + M+L + D Sbjct: 15 LSRETILDVYKAVMRGRRVDER---LWQLTRIGKFSFNISGQGAEVGQAAMALAFDYDKD 71 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGG-ISKGKGGSMHMFSTKNGFYGGHGIVGA 162 + YR+ +L G+ IM G++ S G+ H S + V Sbjct: 72 YFLPYYRDLTAVLMWGMTTKDIMLAGFGKEADPASHGRQMPSHYGSKAHNIVSHSSPVST 131 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q + GIA+ + R D + VV GDG+ +QG+ + NIA + + V++V+ENN YA+ Sbjct: 132 QYPISAGIAYGAQMRGEDYVTVVTTGDGSFSQGECAVAMNIAGVHKMPVVFVVENNGYAI 191 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 A + RG +F G++V+G D +AV R GP +IE++ Sbjct: 192 SVPDKEQYAVEKLADRGPAFGFNGIRVNGSDFAETYLAFKQAVTDARQGNGPTLIEIMVE 251 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D YR+ EE+ E++ N DP++ +++L+ + +E D+ IE + IN Sbjct: 252 RLTSHSSDDDQRVYRSAEELAEIKEN-DPVKLFQQQLIDEGYLNEADIDRIEKELETEIN 310 Query: 342 NSVEFAQSDKEPDPAEL 358 + + A++ +PDPA++ Sbjct: 311 QATDEAEAMPDPDPAKI 327 >gi|162448151|ref|YP_001621283.1| pyruvate dehydrogenase E1 component subunit alpha [Acholeplasma laidlawii PG-8A] gi|161986258|gb|ABX81907.1| pyruvate dehydrogenase E1 component, alpha subunit [Acholeplasma laidlawii PG-8A] Length = 361 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 97/302 (32%), Positives = 157/302 (51%), Gaps = 12/302 (3%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE L Y+ +L R + KA Q G + + +GQEA +GM ++ D Sbjct: 34 KETLLKMYKTAVLGRNADIKALQYQRQGRMLTYAP-NMGQEAAQIGMAAAMEPQDWNSPM 92 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YRE +L G + G + G K +G + + T + I+G+Q ++ Sbjct: 93 YRELNTLLYRGDKLENVFLYWYGNERGSIKPEG--VKILPT-------NIIIGSQSNIAA 143 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A A+K R+++++ GDG G+ YE N AA + V+ VI+NNQ+A+ T V + Sbjct: 144 GLAMASKIRKTNEVTAFTIGDGGTAHGEFYEGLNFAASFKAPVVAVIQNNQWAISTPVRK 203 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 AS +++GV+F IP +QVDG D+ A+ +A+ R GP +IE TYR H+ Sbjct: 204 ASNSETLAQKGVAFGIPYIQVDGNDMLAMYVASKEAMDRARKGDGPTLIEAFTYRMGPHT 263 Query: 289 MS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 S DP+ YRT+EE NE + D I + + L++ + SE + K++E V IN++ + Sbjct: 264 TSDDPSIYRTKEEENEW-AKKDQIARFKTYLINKGYWSEEEDKKLEEEVLAEINDTFKKV 322 Query: 348 QS 349 +S Sbjct: 323 ES 324 >gi|239918260|ref|YP_002957818.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Micrococcus luteus NCTC 2665] gi|281415547|ref|ZP_06247289.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Micrococcus luteus NCTC 2665] gi|239839467|gb|ACS31264.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Micrococcus luteus NCTC 2665] Length = 400 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 88/323 (27%), Positives = 159/323 (49%), Gaps = 12/323 (3%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G E + E+ L+AYR +++ RR ++A L G + + GQEA V + L Sbjct: 62 GHEYPLPSAEELLAAYRHLVIGRRVNDQAYALVRQGRMAVYPS-SHGQEASEVAAAVCLG 120 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 E D + YR+ ++A GV ++M QG +G H S ++ + Sbjct: 121 EDDWLFPTYRDTVAVIARGVPPLEVM---VAYQGTWHQGYDPQKHRVSIQST------PL 171 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q+ G+A A + R + +C+ GDG ++G +E+ N AA++ L VI+ ++NN++ Sbjct: 172 TTQMLHAVGMAKAARLRGEEVVCLAMVGDGGTSEGDFHEALNFAAVFKLPVIFFVQNNKF 231 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ ++ SA + + + V + + G +VDG D+ A+ A + +AV CR +GP ++E Sbjct: 232 AISVPFAKQSAAPSLAHKAVGYGLAGERVDGNDLGALLAVLGRAVELCRQGQGPFLVEAD 291 Query: 281 TYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR + H+ DP+ YR E+ E + DP+ ++ L +E +I + + Sbjct: 292 TYRMQAHTNTDDPSRYRDDAEVKEWEAR-DPLRRMTAYLESTGALTEEVSAQIARDAEDV 350 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 + ++ E DP EL+ + Sbjct: 351 AQQLRDAMNAETELDPLELFDHV 373 >gi|260904557|ref|ZP_05912879.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Brevibacterium linens BL2] Length = 384 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 89/328 (27%), Positives = 150/328 (45%), Gaps = 21/328 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +E E YR M+L+RR + + L G +G + + GQEA +GM + D Sbjct: 41 AAELTDEDLRGFYRDMVLVRRIDAEGAALQRQGQLGLWAPM-FGQEAAQIGMGRAARPQD 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YREHG GV+ ++ G+ G + H ++ ++G+Q Sbjct: 100 FVFPTYREHGLAYTRGVEPETLLGMFRGQDHGGWDPQEHRFHTYTI---------VIGSQ 150 Query: 164 VSLGTGIAFANKYR--------RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 TG A D + CFGDGA +QG V E+ A ++ V++ Sbjct: 151 TLHATGYAMGVSMDGDVGTGDLERDTAAIACFGDGATSQGDVSEALTFAGAFHAPVLFFC 210 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +NNQ+A+ +A KRG F +PG++VDG DI A+ A ++ RA GP+ Sbjct: 211 QNNQWAISEPTHVQTA-APLCKRGEGFGVPGLRVDGNDIIAMYAVARASLDSVRAGNGPM 269 Query: 276 IIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 +IE TYR H+ + DP YR E E+ + DP+++++ L ++ S E++ Sbjct: 270 LIEAFTYRRGAHTTADDPTKYRDAAE-EEIWEDRDPLKRLKAYLDNHTETSAEFFAEVDA 328 Query: 335 NVRKIINNSVEFAQSDKEPDPAELYSDI 362 + + ++PDP E+++ + Sbjct: 329 EADTLAARIRHNCMTMEDPDPVEMFAHV 356 >gi|330468696|ref|YP_004406439.1| pyruvate dehydrogenase e1 component subunit alpha [Verrucosispora maris AB-18-032] gi|328811667|gb|AEB45839.1| pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit [Verrucosispora maris AB-18-032] Length = 388 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 84/266 (31%), Positives = 131/266 (49%), Gaps = 16/266 (6%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M++ RRF+ +A L G + + GQEA VG ++L + D + YRE + Sbjct: 65 YRRMVIGRRFDAQATALTKQGRLAVYPS-SRGQEACQVGGVLALRDDDWVFPTYRESMAL 123 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH--GIVGAQVSLGTGIAFA 173 A G+D +++ L G H + Q G+A+ Sbjct: 124 TARGIDPVEVLTLLRG-----------DWHCGYDPTAVRTAPQCTPLATQCVHAAGLAYG 172 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 Y+ D + +V GDGA ++G +E N AA++ V+Y ++NN+YA+ +SR +A Sbjct: 173 ESYQGRDTVALVYIGDGATSEGDFHEGVNFAAVFKAPVVYFVQNNRYAISVPLSRQTAAP 232 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 + +GV + +P QVDG D AV A +++AVA+ RA KGP ++E TYR H+ D Sbjct: 233 TLAYKGVGYGVPSEQVDGNDPVAVLAVLNRAVAHARAGKGPYLVEAHTYRMEPHTNADDQ 292 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRL 318 YR EE+ R DPI ++ L Sbjct: 293 TRYRDAEEVEAWR-ERDPITRLESYL 317 >gi|219848985|ref|YP_002463418.1| 3-methyl-2-oxobutanoate dehydrogenase [Chloroflexus aggregans DSM 9485] gi|219543244|gb|ACL24982.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Chloroflexus aggregans DSM 9485] Length = 340 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/309 (30%), Positives = 143/309 (46%), Gaps = 5/309 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHI 115 R M+L R +E+ L G F C G EA VG +L G D ++ YR + Sbjct: 28 RYMMLARALDERMWVLNRAGK-APFVISCQGHEAAQVGAAFALQRGKDFILPYYRGLATV 86 Query: 116 LACGVDASKIMAELTGRQGGISKG-KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 L G+ +++M L R S G + H + VG Q++ GI A Sbjct: 87 LVMGMTPTEVMLGLFARATDPSSGGRQMPAHYGCRRLKIVTQSSPVGTQIAHAAGIGLAE 146 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + D + V FG+G +QG +E+ N+AA+ L VI+ ENN+YA+ + A + Sbjct: 147 KIKGGDAVAWVSFGEGTTSQGDFHEALNLAAVHRLPVIFQCENNEYAISVHQRQQMAVAS 206 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 + RG ++ IPG+ VDG D+ AV +AV R GP +IE R HS D Sbjct: 207 VADRGPAYGIPGISVDGTDVLAVYEVTRRAVERARRGDGPTLIEARVVRMTAHSSDDNDR 266 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR E+ +R + DPI + +L + SE D + + V +I++ + A P Sbjct: 267 TYRPPHELTLVR-HQDPIVRFIAQLREHGILSEADEQAMRTEVAEIVDKATTEADQAPMP 325 Query: 354 DPAELYSDI 362 +P LY + Sbjct: 326 EPETLYDHV 334 >gi|163847255|ref|YP_001635299.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Chloroflexus aurantiacus J-10-fl] gi|222525096|ref|YP_002569567.1| 3-methyl-2-oxobutanoate dehydrogenase [Chloroflexus sp. Y-400-fl] gi|163668544|gb|ABY34910.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Chloroflexus aurantiacus J-10-fl] gi|222448975|gb|ACM53241.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Chloroflexus sp. Y-400-fl] Length = 342 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 144/309 (46%), Gaps = 5/309 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHI 115 R M+L R +E+ L G F C G EA VG +L G D ++ YR + Sbjct: 28 RYMMLARALDERMWVLNRAGK-APFVISCQGHEAAQVGAAFALMRGKDFILPYYRGLATV 86 Query: 116 LACGVDASKIMAELTGRQGGISKG-KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 L G+ +++M L R S G + H + VG Q+ GI A Sbjct: 87 LVMGMTPTEVMLGLFARATDPSSGGRQMPAHYGCRRLKIVTQSSPVGTQIPHAAGIGLAE 146 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + D + V FG+G +QG +E N+AA+ L VI+ ENN+YA+ + A + Sbjct: 147 KIKGGDAVVWVSFGEGTTSQGDFHEGVNLAAVHRLPVIFQCENNEYAISVHQRQQMAIGS 206 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 ++R ++ IPG+ VDG D+ AV +AV R GP +IE R HS D Sbjct: 207 VAERAAAYGIPGISVDGTDVLAVYEVTRRAVERARRGDGPTLIEARVVRMTAHSSDDNDR 266 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR EI +R + DPI + +L + SE + +E+ V+ I++ + E A+ P Sbjct: 267 TYRPPHEIALVR-HQDPIVRFVAQLREHGILSEAEEQEMRAEVKAIVDRATEEAERAPMP 325 Query: 354 DPAELYSDI 362 +P LY + Sbjct: 326 EPETLYDHV 334 >gi|289706157|ref|ZP_06502524.1| dehydrogenase E1 component [Micrococcus luteus SK58] gi|289557119|gb|EFD50443.1| dehydrogenase E1 component [Micrococcus luteus SK58] Length = 400 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 88/323 (27%), Positives = 159/323 (49%), Gaps = 12/323 (3%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G E + E+ L+AYR +++ RR ++A L G + + GQEA V + L Sbjct: 62 GHEYPLPSDEELLAAYRHLVIGRRVNDQAYALVRQGRMAVYPS-SHGQEASEVAAAVCLG 120 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 E D + YR+ ++A GV ++M QG +G H S ++ + Sbjct: 121 EDDWLFPTYRDTVAVIARGVPPLEVM---VAYQGTWHQGYDPRKHHVSIQST------PL 171 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q+ G+A A + R + +C+ GDG ++G +E+ N AA++ L VI+ ++NN++ Sbjct: 172 TTQMLHAVGMAKAARLRGEEVVCLAMVGDGGTSEGDFHEALNFAAVFKLPVIFFVQNNKF 231 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ ++ SA + + + V + + G +VDG D+ A+ A + +AV CR +GP ++E Sbjct: 232 AISVPFAKQSAAPSLAHKAVGYGLAGERVDGNDLGALLAVLGRAVELCRQGQGPFLVEAD 291 Query: 281 TYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR + H+ DP+ YR E+ E + DP+ ++ L +E +I + + Sbjct: 292 TYRMQAHTNTDDPSRYRDDAEVKEWEAR-DPLRRMTAYLESTGALTEEVSAQIARDAEDV 350 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 + ++ E DP EL+ + Sbjct: 351 AQQLRDAMNAETELDPLELFDHV 373 >gi|31544689|ref|NP_853267.1| pyruvate dehydrogenase E1 component subunit alpha [Mycoplasma gallisepticum str. R(low)] gi|31541535|gb|AAP56835.1| Pyruvate dehydrogenase E1 component alpha subunit [Mycoplasma gallisepticum str. R(low)] gi|284931342|gb|ADC31280.1| Pyruvate dehydrogenase E1 component alpha subunit [Mycoplasma gallisepticum str. F] Length = 359 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 84/278 (30%), Positives = 145/278 (52%), Gaps = 16/278 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLC--IGQEAVIVGMKMSLTE 101 V + + E+ + AY M L R ++K + G L IG+EA+ +G +++T+ Sbjct: 29 VQKLSDERVIEAYYYMNLSRELDKK---MLTWQRSGKMLTLAPNIGEEALQLGTSLAMTK 85 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D ++ A+R +L GV ++M G + G ++F + +G Sbjct: 86 KDWLVPAFRSGALMLHRGVKPYQLMLYWNGNEKG---------NVFDEGVRVIPINITIG 136 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 AQ S GI +A K + V GDG +G+ YE+ N+A++ ++ + NNQYA Sbjct: 137 AQYSQAAGIGYALKQNKERAAAVTFIGDGGTAEGEFYEAMNLASIHKWQTVFCVNNNQYA 196 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T + SA ++ S + ++ N+P ++VDG D+ A M +A+ Y R+ GPI +E +T Sbjct: 197 ISTRTNLESAVSDLSTKAIAVNMPRVRVDGNDLLACYDAMLEAIEYSRSGMGPIFVEFVT 256 Query: 282 YRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 YR H+ S DP+ YRT++E E + + DPI +++K L Sbjct: 257 YRQGPHTTSDDPSVYRTKQEEEEAKKS-DPIARIKKFL 293 >gi|291484844|dbj|BAI85919.1| branched-chain alpha-keto acid dehydrogenase subunit E1 [Bacillus subtilis subsp. natto BEST195] Length = 330 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/314 (31%), Positives = 152/314 (48%), Gaps = 21/314 (6%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 ++ + YR MLL R+ +E+ L G + F C GQEA VG +L E D + Sbjct: 11 LTDQEAVDMYRTMLLARKIDERMWLLNRSGKIP-FVISCQGQEAAQVGAAFALDREMDYV 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGA 162 + YR+ G +LA G+ A +M ++G GG H KN G V Sbjct: 70 LPYYRDMGVVLAFGMTAKDLM--MSGFAKAADPNSGGRQMPGHFGQKKNRIVTGSSPVTT 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV GIA A + + D V FG+G++NQG +E N AA+ L VI++ ENN+YA+ Sbjct: 128 QVPHAVGIALAGRMEKKDIAAFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A N S R V + +PG+ V+G D V + +A R +GP +IE ++Y Sbjct: 188 SVPYDKQVACENISDRAVGYGMPGVTVNGNDPLEVYQAVKEARERARRGEGPTLIETISY 247 Query: 283 RYRGH-SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM------N 335 R H S D ++YR REE+ E + + DP+ L + + E L EM Sbjct: 248 RLTPHSSDDDDSSYRGREEVEEAKKS-DPL------LTYQAYLKETGLLSDEMEQTMLDE 300 Query: 336 VRKIINNSVEFAQS 349 + I+N + + A++ Sbjct: 301 IMAIVNEATDEAEN 314 >gi|242373314|ref|ZP_04818888.1| pyrubate dehydrogenase E1 component alpha subunit [Staphylococcus epidermidis M23864:W1] gi|242349024|gb|EES40626.1| pyrubate dehydrogenase E1 component alpha subunit [Staphylococcus epidermidis M23864:W1] Length = 370 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 93/277 (33%), Positives = 139/277 (50%), Gaps = 13/277 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + EQ + M+ R ++++ L G +G F GQEA + + +L + D Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQYALEKED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ ++ A L R G KG + F I+GAQ Sbjct: 99 FILPGYRDVPQIIWHGLPLTE--AFLFSR--GHFKG-----NQFPEGVNALSPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+AF K R + + + GDG ++QG YE N A+ + I+VI+NN YA+ Sbjct: 150 YVQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A T +++ VS IPG+QVDGMD AV +A A +GP +IE LTYR Sbjct: 210 TPRSKQTAATTLAQKAVSVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIETLTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 Y H+M+ DP YRT +E E DP+ + RK L Sbjct: 270 YGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKYL 305 >gi|49483256|ref|YP_040480.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus MRSA252] gi|257425145|ref|ZP_05601571.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus subsp. aureus 55/2053] gi|257427808|ref|ZP_05604206.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus subsp. aureus 65-1322] gi|257430443|ref|ZP_05606825.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus subsp. aureus 68-397] gi|257433145|ref|ZP_05609503.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus subsp. aureus E1410] gi|257436044|ref|ZP_05612091.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus M876] gi|282905411|ref|ZP_06313266.1| pyruvate dehydrogenase acetyl-transferring E1 component alpha subunit [Staphylococcus aureus subsp. aureus Btn1260] gi|282908383|ref|ZP_06316214.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910670|ref|ZP_06318473.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282913868|ref|ZP_06321655.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Staphylococcus aureus subsp. aureus M899] gi|282918792|ref|ZP_06326527.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus C427] gi|282923914|ref|ZP_06331590.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus C101] gi|283957837|ref|ZP_06375288.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|293500905|ref|ZP_06666756.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus 58-424] gi|293509861|ref|ZP_06668570.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus M809] gi|293526447|ref|ZP_06671132.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Staphylococcus aureus subsp. aureus M1015] gi|295427581|ref|ZP_06820213.1| pyruvate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591465|ref|ZP_06950103.1| pyruvate dehydrogenase complex E1 component alpha subunit [Staphylococcus aureus subsp. aureus MN8] gi|60390439|sp|Q6GHZ2|ODPA_STAAR RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|49241385|emb|CAG40069.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus MRSA252] gi|257272121|gb|EEV04253.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus subsp. aureus 55/2053] gi|257274649|gb|EEV06136.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus subsp. aureus 65-1322] gi|257278571|gb|EEV09190.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus subsp. aureus 68-397] gi|257281238|gb|EEV11375.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus aureus subsp. aureus E1410] gi|257284326|gb|EEV14446.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus M876] gi|282313886|gb|EFB44278.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus C101] gi|282316602|gb|EFB46976.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus C427] gi|282321936|gb|EFB52260.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Staphylococcus aureus subsp. aureus M899] gi|282325275|gb|EFB55584.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282328048|gb|EFB58330.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330703|gb|EFB60217.1| pyruvate dehydrogenase acetyl-transferring E1 component alpha subunit [Staphylococcus aureus subsp. aureus Btn1260] gi|283470304|emb|CAQ49515.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus ST398] gi|283789986|gb|EFC28803.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|290920519|gb|EFD97582.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Staphylococcus aureus subsp. aureus M1015] gi|291095910|gb|EFE26171.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus 58-424] gi|291467311|gb|EFF09828.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus M809] gi|295127939|gb|EFG57573.1| pyruvate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576351|gb|EFH95067.1| pyruvate dehydrogenase complex E1 component alpha subunit [Staphylococcus aureus subsp. aureus MN8] gi|312438530|gb|ADQ77601.1| pyruvate dehydrogenase complex E1 component alpha subunit [Staphylococcus aureus subsp. aureus TCH60] Length = 370 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 147/294 (50%), Gaps = 16/294 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + EQ + M+ R ++++ L G +G F GQEA + + +L + D Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQYALEKED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ ++ A L R G KG + F I+GAQ Sbjct: 99 YILPGYRDVPQIIWHGLPLTE--AFLFSR--GHFKG-----NQFPEGVNALSPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+AFA K R + + + GDG ++QG YE N AA + I+VI+NN YA+ Sbjct: 150 YIQTAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A +++ ++ IPG+QVDGMD AV +A A +GP +IE +TYR Sbjct: 210 TPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIE 333 Y H+M+ DP YRT +E E DP+ + RK L NK W + + + IE Sbjct: 270 YGPHTMAGDDPTRYRTSDEDAEW-EKKDPLVRFRK-FLENKGLWNEDKENEVIE 321 >gi|145594629|ref|YP_001158926.1| pyruvate dehydrogenase (acetyl-transferring) [Salinispora tropica CNB-440] gi|145303966|gb|ABP54548.1| Pyruvate dehydrogenase (acetyl-transferring) [Salinispora tropica CNB-440] Length = 382 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 82/264 (31%), Positives = 137/264 (51%), Gaps = 12/264 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L RRF+ +A L G + + GQEA VG ++L + D + YRE + Sbjct: 59 YRRMVLGRRFDLQATALTKQGRLAVYPS-ARGQEACQVGAILALRDDDWVFPTYRESMAL 117 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 A G+D +++ L +G G ++ + + + Q G+A+ Sbjct: 118 TARGIDPVEVLTLL---RGDWHCGYDPAVRRTAPQCT------PLATQCVHAAGLAYGEA 168 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y+ D + + GDGA ++G +E N AA++ V+Y ++NNQYA+ +SR +A + Sbjct: 169 YQGRDTVALAFIGDGATSEGDFHEGVNFAAVFKAPVVYFVQNNQYAISVPLSRQTAAPSL 228 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPAN 294 + +GV + +P QVDG D AV A +++AVA+ RA GP ++E TYR H+ D A Sbjct: 229 AYKGVGYGVPSEQVDGNDPVAVLAVLNRAVAHARAGHGPFLVEAHTYRMEPHTNADDAAR 288 Query: 295 YRTREEINEMRSNHDPIEQVRKRL 318 YR +E+ + + DP+ ++ L Sbjct: 289 YRDADEVASWQ-DRDPVVRLETHL 311 >gi|268317042|ref|YP_003290761.1| dehydrogenase E1 component [Rhodothermus marinus DSM 4252] gi|262334576|gb|ACY48373.1| dehydrogenase E1 component [Rhodothermus marinus DSM 4252] Length = 657 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 90/310 (29%), Positives = 148/310 (47%), Gaps = 4/310 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR +LL R EE+ +L G + + GQEA+ VG +L + D ++ +R G Sbjct: 13 YRALLLPRVIEERMLRLIRQGRLSKWFS-GYGQEAIAVGCAWALEDHDYILPMHRNLGVW 71 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GV + +L GR GG +KG+ + H + G + A + + G+ A + Sbjct: 72 TTRGVPLRPLFCQLMGRAGGFTKGRDRTFHFGLPERRIIGMISHMAAMLPVACGLGLAAR 131 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +R D + + G+G +G +E+ N+AA+W L VI+V+ENN Y + T A + Sbjct: 132 LKREDFVVLAFSGEGGTREGDFHEALNLAAVWKLPVIFVVENNGYGLSTPAHEAIPVEDV 191 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + V + +PG VDG D+ AV + +A RA +GP ++EM T+R RGH + Y Sbjct: 192 ADAAVGYGMPGEVVDGNDVLAVIDAVRRAAERARAGEGPTLLEMKTFRMRGHEEASGTKY 251 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF--AQSDKEP 353 +E+ E DPI++ L S + K I + + + E+ AQ + E Sbjct: 252 -VPKELFEYWRKRDPIDRFEAYLERAGVLSRAERKTIRAELEAEVREATEYALAQPEVES 310 Query: 354 DPAELYSDIL 363 P +D+ Sbjct: 311 TPEAERADLF 320 >gi|312200897|ref|YP_004020958.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Frankia sp. EuI1c] gi|311232233|gb|ADP85088.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Frankia sp. EuI1c] Length = 487 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 152/312 (48%), Gaps = 21/312 (6%) Query: 9 TVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEK 68 TV ++ L PS +R AT+S ++ V++ L Y M+++RR +E+ Sbjct: 12 TVTELMQLLTPS--GQRVATASGREIEA------HVADVGVADLLDLYADMVVVRRLDEE 63 Query: 69 AGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAE 128 A L G +G + L GQEA VG +L D +YREHG GVD ++ Sbjct: 64 ATALQRQGELGLWAPL-RGQEAAQVGSARALAPDDMAFPSYREHGVAYCRGVDPVAVL-- 120 Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFG 188 G G+S G ++GF +VGAQ TG A + FG Sbjct: 121 --GLFRGVSHGG-----WDPAEHGFALYAIVVGAQTLHATGYAMGVTRDGGQCATITYFG 173 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ 248 DGA++QG V E+F AA+++ V++ +NNQYA+ + S + S+R V + PG++ Sbjct: 174 DGASSQGDVNEAFGWAAVFSAPVVFFCQNNQYAISEPTAYQS-RVPISQRAVGYGFPGVR 232 Query: 249 VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSN 307 VDG D+ A A A+ RA GP ++E +TYR H+ + DP YR E+ + Sbjct: 233 VDGNDVLATLAVTRWALERARAGDGPTLVEAVTYRMGAHTTADDPTRYRDAAEVAAW-AQ 291 Query: 308 HDPIEQVRKRLL 319 DPI +VR L+ Sbjct: 292 RDPIARVRAHLV 303 >gi|288921457|ref|ZP_06415734.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Frankia sp. EUN1f] gi|288347135|gb|EFC81435.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Frankia sp. EUN1f] Length = 363 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/324 (30%), Positives = 162/324 (50%), Gaps = 19/324 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG- 102 V + +Q ++A LMLL R F+EKA L G G F + GQEA +VG ++ G Sbjct: 32 VPSLDDDQVVAALELMLLSRAFDEKAFSLQRQGRFGTFSPVH-GQEASVVGSAFAVEPGH 90 Query: 103 DQMITAYREHGHILACGVDASKIMAELTG--RQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D ++ YRE +L G+ M G R G I G +++ + G + Sbjct: 91 DWIVPQYRELPALLRHGLPLESFMQTFMGDPRGGAIPPG----VNLLPIQIG-------L 139 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 AQ+ G+A+ + R D + +V GDGA+++G +E+ N+A + V+++++NN + Sbjct: 140 AAQLPQAVGLAWGRRLRGDDAVVLVYVGDGASSEGDFHEACNLAGVLRAPVVFLLQNNGW 199 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ T SR SA + R + PG+ VDG D+ AV A + +AV RA GP ++E L Sbjct: 200 AISTPRSRQSAAATLAARAPGYGFPGVLVDGNDLLAVHAVVAEAVTRARAGDGPTLVESL 259 Query: 281 TYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDLKEIEMNVRK 338 TYR H+ + DP+ Y + + E + DP+ +VR L W E ++ E +R Sbjct: 260 TYRVGAHNTADDPSRYVPGDALREWQ-ERDPLSRVRGYLRARGSWDDEREIHAAE-RIRA 317 Query: 339 IINNSVEFAQSDKEPDPAELYSDI 362 I+ +V +S P L+ + Sbjct: 318 RIDAAVRVVESTPPPGAPALFDHV 341 >gi|282903642|ref|ZP_06311530.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus C160] gi|282595260|gb|EFC00224.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus C160] Length = 370 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 147/294 (50%), Gaps = 16/294 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + EQ + M+ R ++++ L G +G F GQEA + + +L + D Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLSSQYALEKED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ ++ A L R G KG + F I+GAQ Sbjct: 99 YILPGYRDVPQIIWHGLPLTE--AFLFSR--GHFKG-----NQFPEGVNALSPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+AFA K R + + + GDG ++QG YE N AA + I+VI+NN YA+ Sbjct: 150 YIQTAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A +++ ++ IPG+QVDGMD AV +A A +GP +IE +TYR Sbjct: 210 TPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIE 333 Y H+M+ DP YRT +E E DP+ + RK L NK W + + + IE Sbjct: 270 YGPHTMAGDDPTRYRTSDEDAEWEK-KDPLVRFRK-FLENKGLWNEDKENEVIE 321 >gi|315506466|ref|YP_004085353.1| dehydrogenase e1 component [Micromonospora sp. L5] gi|315413085|gb|ADU11202.1| dehydrogenase E1 component [Micromonospora sp. L5] Length = 300 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 86/247 (34%), Positives = 127/247 (51%), Gaps = 9/247 (3%) Query: 60 LLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA-C 118 LLIRRFEE +LY G + G H C+GQE V V + LT GD + + +R HGH LA C Sbjct: 17 LLIRRFEEHLLRLYADGHLAGTTHTCLGQEYVPVALAPLLT-GDFVFSNHRGHGHYLAHC 75 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G D ++AEL GR+GG+ G GGS H+ + + G+ G + G+ Sbjct: 76 G-DPEGLLAELLGREGGVCHGYGGSQHL---RRDRFLSTGVQGESLPAAVGVGLHLNRTG 131 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 D + V GDG +G VYE+ N+AALW + ++ V+E+N+ A T + A T + R Sbjct: 132 QDAMVVAYIGDGTWGEGAVYEALNMAALWRVPLLVVVEHNRIAQSTPTTAQLAGT-IAGR 190 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 F I + + +D+ V+A V RA + P ++ T R HS D + R Sbjct: 191 VTGFGITVSESESLDLTEVRAAAAPHVERVRATRAPHVLVQHTVRLGPHSKGD--DTRPP 248 Query: 299 EEINEMR 305 E++ +R Sbjct: 249 GELDRLR 255 >gi|16082407|ref|NP_394892.1| 3-methyl-2-oxobutanoate dehydrogenase alpha chain precursor [Thermoplasma acidophilum DSM 1728] gi|10640780|emb|CAC12558.1| probable 3-methyl-2-oxobutanoate dehydrogenase alpha chain precursor [Thermoplasma acidophilum] Length = 337 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 87/305 (28%), Positives = 154/305 (50%), Gaps = 6/305 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+L R F++K G+VG F +GQEA G M+L++ D + YR+ ++ Sbjct: 20 MVLGRYFDKKIITAQRQGLVG-FYTPMMGQEATQAGAAMALSKEDSVYGYYRDVTMLIYL 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G KI ++ G +KG+ H + + F V + L G A+A KYR+ Sbjct: 79 GHPIEKIFDQIMGNAEDSAKGRQMPSHYSAKEINFMSVPSPVATNLPLAVGAAYAKKYRK 138 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + I + FGDG + + + N AA+++L V+++ ENN +A+ V + + + K+ Sbjct: 139 QEGIVITTFGDGGTSTPDFHAAMNFAAVFDLPVVFLCENNGWAISLPVEKQT-KAEIYKK 197 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRT 297 ++ + G+ VDG D T+ AV Y R+ PI++E +YR HS S DP+ YR Sbjct: 198 AEAYGMKGVYVDGNDFIKTYRTVKDAVEYARSG-NPILVEARSYRMGPHSTSDDPSKYR- 255 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 + E+ E S+ DP+ K ++ + ++ ++ +I+ +K+I+ E PDP Sbjct: 256 KNEVQE-NSDLDPLVIAEKLMISGGYLNQAEIDKIKDESKKMIDEKFEERLKIPAPDPET 314 Query: 358 LYSDI 362 ++ D+ Sbjct: 315 MFDDV 319 >gi|212275011|ref|NP_001130417.1| hypothetical protein LOC100191513 [Zea mays] gi|194689064|gb|ACF78616.1| unknown [Zea mays] gi|194690354|gb|ACF79261.1| unknown [Zea mays] gi|194690522|gb|ACF79345.1| unknown [Zea mays] gi|194703080|gb|ACF85624.1| unknown [Zea mays] Length = 488 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 87/325 (26%), Positives = 152/325 (46%), Gaps = 2/325 (0%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 + G E ++E L Y M+ ++ + + G + F G+EA+ + + Sbjct: 133 ISGSRFQEVSRELALKMYSEMVTLQIMDTIFYEAQRQGRIS-FYLTSNGEEAINIASAAA 191 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L+ D ++ YRE G +L G + + G + KG+ +H S + ++ Sbjct: 192 LSMDDIVLPQYREPGVLLWRGFTLQEFANQCFGNKLDYGKGRQMPIHYGSNRLNYFTVSS 251 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + Q+ G A++ K + D + FGDG ++G + + N AA+ VI+ NN Sbjct: 252 PIATQLPHAVGAAYSLKMDKKDACAITYFGDGGTSEGDFHAALNFAAVMEAPVIFFCRNN 311 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +A+ T + RG ++ I G++VDG D AV + + A PI++E Sbjct: 312 GWAISTPTTEQFRSDGVVIRGQAYGIRGIRVDGNDALAVYSAIHAAREMAVTEGRPILVE 371 Query: 279 MLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 LTYR HS SD + YR +EI R+ DPI + RK + N W S+ + E+ VR Sbjct: 372 ALTYRVGHHSTSDDSTKYRPVDEIEHWRTARDPISRYRKWVQGNDWWSDAEESELRSRVR 431 Query: 338 KIINNSVEFAQSDKEPDPAELYSDI 362 K + +++ A+ +P EL++D+ Sbjct: 432 KELLQAIQVAERMPKPPVTELFTDV 456 >gi|258423593|ref|ZP_05686483.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus A9635] gi|257846294|gb|EEV70318.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus A9635] Length = 370 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 93/281 (33%), Positives = 141/281 (50%), Gaps = 14/281 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + EQ + M+ R ++++ L G +G F GQEA + + +L + D Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQYALEKED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ ++ A L R G KG + F I+GAQ Sbjct: 99 YILPGYRDVPQIIWHGLPLTE--AFLFSR--GHFKG-----NQFPEGVNALSPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+AFA K R + + + GDG ++QG YE N AA + I+VI+NN YA+ Sbjct: 150 YIQTAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A +++ ++ IPG+QVDGMD AV +A A +GP +IE +TYR Sbjct: 210 TPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 Y H+M+ DP YRT +E E DP+ + RK L NK Sbjct: 270 YGPHTMAGDDPTRYRTSDEDAEWEK-KDPLVRFRK-FLENK 308 >gi|157692911|ref|YP_001487373.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) alpha subunit [Bacillus pumilus SAFR-032] gi|157681669|gb|ABV62813.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) alpha subunit [Bacillus pumilus SAFR-032] Length = 330 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 152/307 (49%), Gaps = 7/307 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ + YR MLL R+ +E+ L G + F C GQEA VG +L E D + Sbjct: 11 LSDEQAIDIYRTMLLARKIDERMWLLNRSGKIP-FVISCQGQEAQQVGAAFALNREEDYV 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A +M +Q + G G M H N G V Q Sbjct: 70 LPYYRDMGVVLAFGMTAKDLMMSGFAKQDDPNSG-GRQMPGHFGQKSNRIVTGSSPVTTQ 128 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GIA A + + + + V FG+G++NQG +E N AA+ L VI++ ENN+YA+ Sbjct: 129 VPHAVGIALAGRLDQKNFVSFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAIS 188 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + A S R + + +PG+ VDG D V A + +A +GP +IE ++YR Sbjct: 189 VPYDKQVACERISDRAIGYGMPGVTVDGNDPLEVYAAVKEARDRAARGEGPTLIETISYR 248 Query: 284 YRGH-SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H S D ++YR +EE+ E R DP+ + L + +E+ + +I+N Sbjct: 249 LTAHSSDDDDSSYREKEEVLEARKK-DPLIKYETYLTEGNVMTSEMKEEMTKEIMQIVNE 307 Query: 343 SVEFAQS 349 + + A++ Sbjct: 308 ATDEAEN 314 >gi|332668777|ref|YP_004451784.1| pyruvate dehydrogenase E1 component subunit alpha [Cellulomonas fimi ATCC 484] gi|332337814|gb|AEE44397.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cellulomonas fimi ATCC 484] Length = 385 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 91/281 (32%), Positives = 138/281 (49%), Gaps = 15/281 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V+ + + + YR M+L+RRF+ +A L G + F +GQEA +G ++T D Sbjct: 37 VAHLDADALRAMYRDMVLVRRFDTEATSLQRQGELALFAQ-SLGQEAAQIGSAHAMTARD 95 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI---V 160 + +YREHG A GVD + ++ G G H+++ G + H + Sbjct: 96 HVFPSYREHGVAHARGVDMADVLRLFRGVDHGGWDPVAHGFHLYTLVIGSHTLHATGYAM 155 Query: 161 GAQVS--LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 G Q +GTG A D VV FGDGA QG V E+ AA+ N V++ +NN Sbjct: 156 GLQRDGLVGTGDA------ERDSAVVVYFGDGATAQGDVNEALVFAAVNNAPVVFFCQNN 209 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 Q+A+ ++ A+ + RG F +P ++VDG D+ A A A+ R+ GP +E Sbjct: 210 QWAISEPTTK-QARVPLADRGPGFGVPSVRVDGNDVLATYAVTQWALERARSGGGPTFVE 268 Query: 279 MLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 TYR H+ S DP YR+ E E DPI+++R L Sbjct: 269 AFTYRMGAHTTSDDPTRYRSSAE-EEYWRRRDPIDRLRLHL 308 >gi|291303507|ref|YP_003514785.1| pyruvate dehydrogenase E1 component subunit alpha [Stackebrandtia nassauensis DSM 44728] gi|290572727|gb|ADD45692.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Stackebrandtia nassauensis DSM 44728] Length = 385 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 100/352 (28%), Positives = 158/352 (44%), Gaps = 24/352 (6%) Query: 24 KRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 K+ D V + +G VS + E+ YR M+++RR + + L G Sbjct: 20 KKTPVGDPDMVQLLTPDGKRVSHPDYAVDLTDEEYRGLYRDMVIVRRLDSEGTALQRQGQ 79 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 +G + L +GQEA +G +L D + YREHG + G+D G G Sbjct: 80 LGIWASL-LGQEAAQIGSGRALAAQDMVFPTYREHGVLWTKGIDPIMPFGLFRGVDLGGW 138 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG----IAFANKYRRSDKICVVC-FGDGAA 192 + M++ ++GAQ TG I K D V+ FGDGA+ Sbjct: 139 DSRKYKFQMYTI---------VIGAQTLHATGYAMGITMDGKVGTDDGEAVIAYFGDGAS 189 Query: 193 NQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 +QG V ES ++++N +++ +NNQYA+ V R A+ KR F PG++VDG Sbjct: 190 SQGDVNESLVFSSVYNSPIVFFCQNNQYAISEPVFR-QAKAPLFKRADGFGFPGVRVDGN 248 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPI 311 D+ A A A+ R+ GP IE TYR H+ + DP YR E+++ ++ DPI Sbjct: 249 DVLATYAVTKTAMDNARSGNGPTFIEAFTYRMGAHTTTDDPTRYRDSVEVDQWKAK-DPI 307 Query: 312 EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++R L K A L ++ + + E S +PDP ++ + Sbjct: 308 SRMRTFLEAEKLADADWLAGVDAEADEHALSLRERVISMPDPDPDSMFQHVF 359 >gi|321311886|ref|YP_004204173.1| branched-chain alpha-keto acid dehydrogenase E1 subunit [Bacillus subtilis BSn5] gi|320018160|gb|ADV93146.1| branched-chain alpha-keto acid dehydrogenase E1 subunit [Bacillus subtilis BSn5] Length = 330 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 151/308 (49%), Gaps = 9/308 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 ++ + YR MLL R+ +E+ L G + F C GQEA VG +L E D + Sbjct: 11 LTDQEAVDMYRTMLLARKIDERMWLLNRSGKIP-FVISCQGQEAAQVGAAFALDREMDYV 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGA 162 + YR+ G +LA G+ A +M ++G GG H KN G V Sbjct: 70 LPYYRDMGVVLAFGMTAKDLM--MSGFAKAADPNSGGRQMPGHFGQKKNRIVTGSSPVTT 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV GIA A + + D V FG+G++NQG +E N AA+ L VI++ ENN+YA+ Sbjct: 128 QVPHAVGIALAGRMEKKDIAAFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A N S R + + +PG+ V+G D V + +A R +GP +IE ++Y Sbjct: 188 SVPYDKQVACENISDRAIGYGMPGVTVNGNDPLEVYQAVKEARERARRGEGPTLIETISY 247 Query: 283 RYRGH-SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R H S D ++YR REE+ E + + DP+ + L S+ + + + I+N Sbjct: 248 RLTPHSSDDDDSSYRGREEVEEAKKS-DPLLTYQAYLKETGLLSDEIEQTMLDEIMAIVN 306 Query: 342 NSVEFAQS 349 + + A++ Sbjct: 307 EATDEAEN 314 >gi|302788702|ref|XP_002976120.1| hypothetical protein SELMODRAFT_150961 [Selaginella moellendorffii] gi|300156396|gb|EFJ23025.1| hypothetical protein SELMODRAFT_150961 [Selaginella moellendorffii] Length = 393 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 93/329 (28%), Positives = 156/329 (47%), Gaps = 8/329 (2%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L+G ++ E + + Y M+ ++ F+ + G + F IG+EA+ V + Sbjct: 39 LDGSDIPEIDSSLAVKMYHTMVRLQTFDSIFYEAQRQGRIS-FYLTNIGEEALNVASAAA 97 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 LT+ D + YREHG ++ G + + + G KG+ +H S K ++ Sbjct: 98 LTKDDVVFPQYREHGVLMWRGFTLDEFANQCFSNEDGHGKGRQMPIHYGSEKLNYFTISS 157 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + Q+ G A+ K R + V FGDG +++G + + N AA+ V++V NN Sbjct: 158 PIATQLPHAVGAAYGLKMDRKNACAVTYFGDGGSSEGDFHAACNFAAVLEAPVLFVCRNN 217 Query: 219 QYAMGTSVSR----ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 YA+ T A + RG + + ++VDG D AV + A P Sbjct: 218 GYAISTPACEQYKGKHAIQLLAGRG--YGMTSIRVDGNDALAVFKAVSAARKLAVEQSKP 275 Query: 275 IIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 ++IE +TYR HS SD + YR+ EEI RS DP+ + R+ L N W S D KE+ Sbjct: 276 VLIEAMTYRVGHHSTSDDSTKYRSGEEIAHWRSVRDPVLRFRRWLESNAWWSVEDEKELR 335 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDI 362 RK + +++ A+ +P +EL++D+ Sbjct: 336 GAARKEVISAMNQAEKKNKPPLSELFTDV 364 >gi|302548126|ref|ZP_07300468.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptomyces hygroscopicus ATCC 53653] gi|302465744|gb|EFL28837.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptomyces himastatinicus ATCC 53653] Length = 361 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 89/309 (28%), Positives = 147/309 (47%), Gaps = 13/309 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L RR +++A L G +G + + +GQEA G +L D++ +YREH Sbjct: 43 YRDMVLGRRLDQEAYSLQRQGELGLWL-MSLGQEAAQAGSIRALRADDRVFPSYREHVAA 101 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G+ ++++++ G G + H++S ++ Q G A + Sbjct: 102 LCRGISPTELLSQWRGTSHGSWDPERYHFHIYSL---------VLATQTLHAVGYAMGVR 152 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y +D + GDGA++QG E+ N AA+ + V++ +NN +A+ T S+ A + Sbjct: 153 YDAADSVVFTYLGDGASSQGDASEALNWAAVTSAPVVFFCQNNGWAISTPASKQYA-SPL 211 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 +R F + + VDG D+ AV A + V RA P IE TYR GHS S DP Sbjct: 212 RERAKGFGLDAVSVDGNDVLAVHAATRRMVERVRAGGAPGFIEAHTYRMSGHSTSDDPKR 271 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR E ++ HDP+E+VR L WA E + + ++ + ++ EP Sbjct: 272 YRDDAEAARWQA-HDPVERVRLLLTARGWADEDYFATVASDAEELATRTRRECRALPEPS 330 Query: 355 PAELYSDIL 363 ++ + L Sbjct: 331 LSDTFRATL 339 >gi|163788433|ref|ZP_02182879.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Flavobacteriales bacterium ALC-1] gi|159876753|gb|EDP70811.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Flavobacteriales bacterium ALC-1] Length = 666 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 87/300 (29%), Positives = 144/300 (48%), Gaps = 4/300 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L Y ML R EEK L G + + IGQEA+ VG+ M+L + ++ +R Sbjct: 22 LKLYFNMLKPRLIEEKMLILLRQGKISKWFS-GIGQEAISVGVTMALKPSEYILPMHRNL 80 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G + ++ + G+ G +KG+ S H + + G +G Q+ + GIA Sbjct: 81 GVFTTREIPLHRLFCQWQGKASGFTKGRDRSFHFGTQEYNIVGMISHLGPQLGVADGIAL 140 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 AN +++ K+ V G+G ++G +E+ N+A++W L V++ IENN Y + T S Sbjct: 141 ANLLKKNGKVTAVFTGEGGTSEGDFHEALNVASVWQLPVMFCIENNGYGLSTPTSEQYHC 200 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + + RG + I +DG +I + K V R PI+IE T+R RGH + Sbjct: 201 KHLADRGKGYGIESFILDGNNIIETYTKVKKLVESIRKRPRPILIEFKTFRRRGHEEASG 260 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE--FAQSD 350 Y +E + E + DPIE R L K + + ++ I++S+E +A+SD Sbjct: 261 TKYVPKELMEEWEAK-DPIENFRSYLYSKKILTAEIDEAYNAKIKSEIDSSLESAYAESD 319 >gi|167461135|ref|ZP_02326224.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Paenibacillus larvae subsp. larvae BRL-230010] Length = 382 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 85/310 (27%), Positives = 152/310 (49%), Gaps = 12/310 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M+ +R F+ KA L G +G + GQEA VG M+L+ D + +YR+H Sbjct: 59 YENMMHVRMFDRKAVNLQRQGRIGTYAPYE-GQEAAQVGSAMALSPEDWLFPSYRDHAAT 117 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G S+++ G G +G + + Q+ G ++A K Sbjct: 118 ITHGQSLSRVLLYWMGHMEGSVSPEGLKIMPPCVP---------IATQLVHAVGTSWAAK 168 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + + + FG+GA ++G +E+ N A ++ I+ +NN YA+ SA Sbjct: 169 LKGEKQASIAYFGEGATSEGDFHEALNFAGVYQTATIFFCQNNGYAISVPFHAQSASRTI 228 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 ++R +++I G++VDG DI AV T+ +A+ A GP ++E +T+RY H+ S DP Sbjct: 229 AQRAAAYDIVGVRVDGNDIFAVWLTVREAIKRGLAGGGPTLVEAVTFRYGAHTTSDDPRK 288 Query: 295 YRTREEI-NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR +E + +E R DP+ ++R L +E D + + + +I ++V A+S + Sbjct: 289 YRDQERLASEWREQRDPVHRLRLFLQKRGLWNEKDEERMLERLTGLIEDAVSEAESYPKS 348 Query: 354 DPAELYSDIL 363 PA+++ + Sbjct: 349 RPADMFKHVF 358 >gi|16079461|ref|NP_390285.1| branched-chain alpha-keto acid dehydrogenase E1 subunit [Bacillus subtilis subsp. subtilis str. 168] gi|221310325|ref|ZP_03592172.1| branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit) [Bacillus subtilis subsp. subtilis str. 168] gi|221314649|ref|ZP_03596454.1| branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319572|ref|ZP_03600866.1| branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit) [Bacillus subtilis subsp. subtilis str. JH642] gi|221323848|ref|ZP_03605142.1| branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit) [Bacillus subtilis subsp. subtilis str. SMY] gi|585606|sp|P37940|ODBA_BACSU RecName: Full=2-oxoisovalerate dehydrogenase subunit alpha; AltName: Full=Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; Short=BCKDH E1-alpha gi|142611|gb|AAA22278.1| branched chain alpha-keto acid dehydrogenase E1-alpha [Bacillus subtilis] gi|1303942|dbj|BAA12598.1| BfmBAA [Bacillus subtilis] gi|2634839|emb|CAB14336.1| branched-chain alpha-keto acid dehydrogenase E1 subunit [Bacillus subtilis subsp. subtilis str. 168] Length = 330 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 151/308 (49%), Gaps = 9/308 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 ++ + YR MLL R+ +E+ L G + F C GQEA VG +L E D + Sbjct: 11 LTDQEAVDMYRTMLLARKIDERMWLLNRSGKIP-FVISCQGQEAAQVGAAFALDREMDYV 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGA 162 + YR+ G +LA G+ A +M ++G GG H KN G V Sbjct: 70 LPYYRDMGVVLAFGMTAKDLM--MSGFAKAADPNSGGRQMPGHFGQKKNRIVTGSSPVTT 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV GIA A + + D V FG+G++NQG +E N AA+ L VI++ ENN+YA+ Sbjct: 128 QVPHAVGIALAGRMEKKDIAAFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A N S R + + +PG+ V+G D V + +A R +GP +IE ++Y Sbjct: 188 SVPYDKQVACENISDRAIGYGMPGVTVNGNDPLEVYQAVKEARERARRGEGPTLIETISY 247 Query: 283 RYRGH-SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R H S D ++YR REE+ E + + DP+ + L S+ + + + I+N Sbjct: 248 RLTPHSSDDDDSSYRGREEVEEAKKS-DPLLTYQAYLKETGLLSDEIEQTMLDEIMAIVN 306 Query: 342 NSVEFAQS 349 + + A++ Sbjct: 307 EATDEAEN 314 >gi|111020310|ref|YP_703282.1| pyruvate dehydrogenase E1 component alpha subunit [Rhodococcus jostii RHA1] gi|110819840|gb|ABG95124.1| pyruvate dehydrogenase E1 component alpha subunit [Rhodococcus jostii RHA1] Length = 372 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 85/264 (32%), Positives = 137/264 (51%), Gaps = 12/264 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L RRF+++A L G + + GQEA + MSL GD M YR+ + Sbjct: 50 YRNMVLGRRFDQQATALTKQGRLAVYPS-SRGQEACQIAAAMSLQPGDWMFPTYRDSVAL 108 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 A G+D +I++ L G G + H + + + Q+ TG+A+ Sbjct: 109 AARGIDPVEILSMLAG---NWHCGYDPAAHRSAPQCT------PLATQLLHATGVAYGEH 159 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + +D I + GDGA ++G +E+ N AA++ V+++++NN +A+ ++R SA Sbjct: 160 RKGNDTIALAFCGDGATSEGDFHEALNFAAVFKAPVVFLVQNNGFAISVPLARQSAAPTL 219 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 + +GV + I QVDG D A+ A MD+A + RA GP+I+E TYR H+ +D A Sbjct: 220 AHKGVGYGIGSEQVDGNDPVAMLAVMDEAANFVRAGNGPVIVEAHTYRIDAHTNADDATR 279 Query: 295 YRTREEINEMRSNHDPIEQVRKRL 318 YR E+ E DP+ ++ K L Sbjct: 280 YRDSSEV-EQWLGRDPLARLEKYL 302 >gi|308069295|ref|YP_003870900.1| pyruvate dehydrogenase E1 component, alpha subunit [Paenibacillus polymyxa E681] gi|305858574|gb|ADM70362.1| Pyruvate dehydrogenase E1 component, alpha subunit [Paenibacillus polymyxa E681] Length = 355 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 87/294 (29%), Positives = 152/294 (51%), Gaps = 13/294 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+ R ++++A L G +G + + GQEA ++G + +L + D + YR+ I Sbjct: 44 YR-MVFTRTWDDRAVNLGRQGRLGFYAPVS-GQEATMIGSEYALQKEDFIAPGYRDIPQI 101 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G+ + G Q G G ++ M I+GAQ+ GIA K Sbjct: 102 VWHGLPLYQAFLYSRGHQHGGQVPDGVNVLMPQI---------IIGAQILHAMGIAMGYK 152 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 ++ ++ + GDG +++G YE N A ++ L VI+ ++NN YA+ T S+ +A + Sbjct: 153 LKKQKQVAITYTGDGGSSEGDFYEGLNYAGVYKLPVIFFVQNNGYAITTPFSKQTAALSI 212 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 + + V+ I G+++DGMD+ AV + +A R +G +IE +TYR+R HS+SD A Sbjct: 213 AHKAVAAGIKGVKIDGMDVLAVIKAVQEAAERGRNGEGATLIEAVTYRFRPHSLSDDATK 272 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 YR++EE E + DPI + K L +E D ++ + +N ++ A+ Sbjct: 273 YRSKEEEGEWNAK-DPIARFAKYLEKKGLWTEEDTARVKEEAKAKVNEEIKKAE 325 >gi|218296093|ref|ZP_03496862.1| Pyruvate dehydrogenase (acetyl-transferring) [Thermus aquaticus Y51MC23] gi|218243470|gb|EED09999.1| Pyruvate dehydrogenase (acetyl-transferring) [Thermus aquaticus Y51MC23] Length = 367 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 94/315 (29%), Positives = 146/315 (46%), Gaps = 14/315 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 YR ML R +E+ L G F G EA V + ++ G D + YR+HG Sbjct: 42 YRDMLAARMLDERYTILIRTGKTS-FIAPAAGHEAAQVAIAHAVRRGFDWLFPYYRDHGL 100 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 LA GV ++ ++ + +KG+ H S + + + V G A + Sbjct: 101 ALALGVPPRELFGQMLATKADPNKGRQMPEHPGSKALNLFTVASPIASHVPPAAGAAISM 160 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K R+ ++ V FGDGA ++G Y N AA+ +++ ENN YA+ + Sbjct: 161 KLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFICENNFYAISVDYRHQTKSPT 220 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + + +F IPG VDGMD+ A + +AV R +GP ++E+ YRY HS + D + Sbjct: 221 IADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARLGEGPSLVELRVYRYGPHSSADDDS 280 Query: 294 NYRTREEINEMRSNHDPIEQVRKRL----LHN-KWASEGDLKEIEMNVRKIINNSVEFAQ 348 YR REE+ R DPI + R+ L L N +W E DLKE +R + ++ A+ Sbjct: 281 RYRPREEVEAWRKR-DPIPRFRRFLEARGLWNAEW--EEDLKE---EIRAELERGLKEAE 334 Query: 349 SDKEPDPAELYSDIL 363 P + D+L Sbjct: 335 EAGPIPPEWMLDDVL 349 >gi|310642337|ref|YP_003947095.1| pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit [Paenibacillus polymyxa SC2] gi|309247287|gb|ADO56854.1| Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit [Paenibacillus polymyxa SC2] Length = 355 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 87/294 (29%), Positives = 152/294 (51%), Gaps = 13/294 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+ R ++++A L G +G + + GQEA +VG + +L + D + YR+ + Sbjct: 44 YR-MVFTRTWDDRAVNLGRQGRLGFYAPVS-GQEATMVGSEFALQKEDFIAPGYRDIPQL 101 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G+ + G Q G G ++ M I+GAQ+ GIA K Sbjct: 102 VWHGLPLYQAFLYSRGHQHGGQIPDGVNVLMPQI---------IIGAQILHAMGIAMGYK 152 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 ++ ++ + GDG +++G YE N A ++ L VI+ ++NN YA+ T S+ +A + Sbjct: 153 LKKQKQVVITYTGDGGSSEGDFYEGLNYAGVYKLPVIFFVQNNGYAITTPFSKQTAALSI 212 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 + + V+ I G+++DGMD+ AV + +A R +G +IE +TYR+R HS+SD A Sbjct: 213 AHKAVAAGIKGVKIDGMDVLAVIKAVQEAAERGRNGEGATLIEAVTYRFRPHSLSDDATK 272 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 YR++EE E + DPI + K L +E D ++ + +N ++ A+ Sbjct: 273 YRSKEEEGEWNAK-DPIARFAKYLEKKGLWTEEDTARVKEEAKAKVNEEIKKAE 325 >gi|297565576|ref|YP_003684548.1| 3-methyl-2-oxobutanoate dehydrogenase [Meiothermus silvanus DSM 9946] gi|296850025|gb|ADH63040.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Meiothermus silvanus DSM 9946] Length = 368 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 8/312 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 YR ML R +EK L G F G EA VG+ +L G D + YR+ G Sbjct: 42 YRDMLAARLLDEKFVILIRTGKTS-FIAPHAGHEAAQVGIAQALQRGHDWLFPYYRDMGL 100 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 ++A GV +I ++ G +KG+ H S + + + + G A + Sbjct: 101 MVAMGVPFKEIFGQMLGNAADPAKGRQMPSHPGSRALNIFTVCSAIASHIPPAAGAAISM 160 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + + ++ V FGDGA ++G Y N AA+ ++ NN+YA+ +S +A Sbjct: 161 KLQGTGQVSVCTFGDGATSEGDWYAGINFAAVQGAPAVFACLNNRYAISVDLSHQTAAHT 220 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + + +F IPG VDGMD+ A M + + R+ GP+++E+ YRY HS + D Sbjct: 221 IADKAHAFGIPGYHVDGMDVLASYFVMQEVIERARSGHGPVLVELEVYRYGPHSSADDDL 280 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINNSVEFAQSDK 351 YR++EE+ E DPIE+ R R L + W E D + + +++ I+ ++E A++ Sbjct: 281 RYRSKEEV-EAAKRRDPIERFR-RFLEKQGLWNLEWD-EMLRADLKAQIDRALEEAEAMG 337 Query: 352 EPDPAELYSDIL 363 E ++ D+ Sbjct: 338 EVPALAMFDDVF 349 >gi|322384914|ref|ZP_08058570.1| pyruvate dehydrogenase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321150211|gb|EFX43718.1| pyruvate dehydrogenase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 395 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 85/313 (27%), Positives = 153/313 (48%), Gaps = 12/313 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + Y M+ +R F+ KA L G +G + GQEA VG M+L+ D + +YR+H Sbjct: 69 IKMYENMMHVRMFDRKAVNLQRQGRIGTYAPYE-GQEAAQVGSAMALSPEDWLFPSYRDH 127 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 + G S+++ G G +G + + Q+ G ++ Sbjct: 128 AATITHGQSLSRVLLYWMGHMEGSVSPEGLKIMPPCVP---------IATQLVHAVGTSW 178 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K + + + FG+GA ++G +E+ N A ++ I+ +NN YA+ SA Sbjct: 179 AAKLKGEKQASIAYFGEGATSEGDFHEALNFAGVYQTATIFFCQNNGYAISVPFHAQSAS 238 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-D 291 ++R +++I G++VDG DI AV T+ +A+ A GP ++E +T+RY H+ S D Sbjct: 239 RTIAQRAAAYDIVGVRVDGNDIFAVWLTVREAIKRGLAGGGPTLVEAVTFRYGAHTTSDD 298 Query: 292 PANYRTREEI-NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 P YR +E + +E R DP+ ++R L +E D + + + +I ++V A+S Sbjct: 299 PRKYRDQERLASEWREQRDPVHRLRLFLQKRGLWNEKDEERMLERLTGLIEDAVSEAESY 358 Query: 351 KEPDPAELYSDIL 363 + PA+++ + Sbjct: 359 PKSRPADMFKHVF 371 >gi|298245721|ref|ZP_06969527.1| Pyruvate dehydrogenase (acetyl-transferring) [Ktedonobacter racemifer DSM 44963] gi|297553202|gb|EFH87067.1| Pyruvate dehydrogenase (acetyl-transferring) [Ktedonobacter racemifer DSM 44963] Length = 362 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 95/308 (30%), Positives = 141/308 (45%), Gaps = 16/308 (5%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E L YR M R F K L G F L +GQEA VG+ + L D + T+Y Sbjct: 35 ETLLGFYRAMSQARIFSNKIIALQRQGRATTFGSL-LGQEATAVGLAVPLQPQDWLATSY 93 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 RE + GV + ++ G + H F + ++G Q+ G Sbjct: 94 REIASHIVKGVPLTTLIYSFRG----FTPTYPRETHCFPIQI-------VIGTQMLHAVG 142 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +A K + V GDGA ++G E+ N A ++ VI V++NN +A+ R Sbjct: 143 LAMGAKLSGDPAVAVGVCGDGATSEGDFNEALNFAGVFQAPVILVVQNNGWAISVPRHRQ 202 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 SA +F+ RG+ F IP VDG DI AV M +AV R+ GP +IE LTYR H+ Sbjct: 203 SAAPSFAARGLGFGIPSHLVDGNDILAVYDVMLQAVERARSGAGPTLIETLTYRIGAHTT 262 Query: 290 S-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE--F 346 + DP YR +E+ + DPI ++R+ L + +E +E++ + IN + Sbjct: 263 ADDPTRYRDAQEVASWQGK-DPITRLRRLLFAQEILTEAQDQEMQRELEDEINQAASEAL 321 Query: 347 AQSDKEPD 354 A PD Sbjct: 322 AMPPNAPD 329 >gi|313125082|ref|YP_004035346.1| pyruvate dehydrogenase e1 component, alpha subunit [Halogeometricum borinquense DSM 11551] gi|312291447|gb|ADQ65907.1| pyruvate dehydrogenase E1 component, alpha subunit [Halogeometricum borinquense DSM 11551] Length = 367 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 85/326 (26%), Positives = 156/326 (47%), Gaps = 16/326 (4%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 EV + + ++ + YR M + R F+ +A L G +G + L GQE +G +L E Sbjct: 24 EVPDLSDDELVRMYREMWMARHFDTRAVSLQRQGRMGTYPPLS-GQEGAQIGSAFALDEE 82 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D M +YREHG L G+ + + G + G + ++ + + Sbjct: 83 DWMFPSYREHGAALHRGLPLKRTLLYWMGHEKGNRIPEDANIFPVAVP---------IST 133 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ TG A+A K + D + FGDG ++G +E N A ++N I+ NNQ+A+ Sbjct: 134 QIPHATGAAWAKKLQGEDSAVLCYFGDGGTSEGDFHEGLNFAGVFNTPNIFFCNNNQWAI 193 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV----KATMDKAVAYCRAHKGPIIIE 278 R +A +++ ++ G+QVDGMD AV +A + KA + P +IE Sbjct: 194 SVPRERQTASATIAQKAKAYGFEGVQVDGMDPLAVYAATRAAVKKAKDPAEDERRPTLIE 253 Query: 279 MLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 + YR+ H+ + DP YR +E+ + + DPI ++ L + + I+ V Sbjct: 254 AVQYRFGAHTTADDPTVYRDSDEVEQWKQK-DPIPRLETFLRDTGRLDDEKVDAIQSEVE 312 Query: 338 KIINNSVEFAQSDKEPDPAELYSDIL 363 + +++ A+++ P+P E+++++ Sbjct: 313 DEVAEAIKAAEAEPRPEPNEMFTNVF 338 >gi|256371618|ref|YP_003109442.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Acidimicrobium ferrooxidans DSM 10331] gi|256008202|gb|ACU53769.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Acidimicrobium ferrooxidans DSM 10331] Length = 358 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 82/269 (30%), Positives = 136/269 (50%), Gaps = 15/269 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+++RRF+E+A L G++G + GQEA +G L E D ++ YR+ Sbjct: 38 YRHMVMLRRFDERAWNLQRQGVIGTYAPYK-GQEAAQLGAAHGLAEQDWLVPTYRDWAAS 96 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGS-MHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 A GV + G+ KG M + + ++ AQ G G+A++ Sbjct: 97 WARGVPL----------EHGLFFAKGHPRMGLVPEEATVLPAQVVIAAQTLHGVGVAWSL 146 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K R K+ +V FGDGAA+QG +E+ N A+++ + +++ ENN +A+ + R Sbjct: 147 KLRHEPKVALVTFGDGAASQGDTHEAMNFASVFRVPLVFFCENNHWAISVPLERQMHSET 206 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 ++R V++ + G +VDG D AV + R +GP ++E +TYR H+ + DP+ Sbjct: 207 IAQRAVAYGMEGFRVDGNDYVAVVNLVHDLAERARQGEGPFLVEAVTYRLGAHTTADDPS 266 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNK 322 YR E E DPI ++ +RLL + Sbjct: 267 KYRESAE-EERWEAKDPIRRI-ERLLQRE 293 >gi|157375466|ref|YP_001474066.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella sediminis HAW-EB3] gi|157317840|gb|ABV36938.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella sediminis HAW-EB3] Length = 392 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 78/269 (28%), Positives = 137/269 (50%), Gaps = 2/269 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA I+G SL D ++ YREH I G + M +L + + KG+ Sbjct: 78 FYMTCTGEEASIIGSVASLDSDDVILAQYREHAAIRYRGFSTEQFMNQLFSNEKDLGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + + + Q+ +G+ ++ K + + V FG+GAA++G + Sbjct: 138 QMPIHYGSAELNYQTISSPLATQIPQASGVGYSLKMQDKRNVAVCYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ I+ NN YA+ T S + RG + I ++VDG D+ AV A Sbjct: 198 LNMAAVLKSPTIFFCRNNGYAISTPTSEQFMGNGIASRGPGYGIHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A A+ +K P++IE +TYR HS S DP+ YR++EE + ++ HDP+++ + ++ Sbjct: 258 TQQARAHAIHNKEPVLIEAMTYRLGAHSSSDDPSGYRSKEEEAKWQT-HDPVKRFKLWMI 316 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 + W +E ++ RK + ++ A+ Sbjct: 317 NKGWLTEKQDADLYEKYRKEVLAELKLAE 345 >gi|269796852|ref|YP_003316307.1| pyruvate dehydrogenase E1 component subunit alpha [Sanguibacter keddieii DSM 10542] gi|269099037|gb|ACZ23473.1| pyruvate dehydrogenase E1 component, alpha subunit [Sanguibacter keddieii DSM 10542] Length = 385 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 90/277 (32%), Positives = 135/277 (48%), Gaps = 5/277 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 S E+ YR M+L+RRF+ +A L G + F L +GQEA +G +L D Sbjct: 41 TSHLGTEELRGLYRDMVLVRRFDTEATALQRQGELALFAPL-LGQEAAQIGSGRALAPQD 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +YREHG G+D ++I+ G G + + H+++ G + H A Sbjct: 100 VAFPSYREHGVAHTRGLDLAEILRLFRGVDHGGWDSEAHNFHLYTLVIGSHSLHATGYAM 159 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+ R D + FGDGA +QG V E+ AA+ N V+ +NNQ+A+ Sbjct: 160 GVQRDGLVGTGDPER-DTAVITYFGDGATSQGDVSEALGFAAVNNAPVVLFCQNNQWAIS 218 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S S + +RG F +P ++VDG D+ A A +A+ R+ GP IE +TYR Sbjct: 219 VPTSTQS-RVPLYRRGAGFGVPSVRVDGNDVLACYAVTAEALERARSGGGPTFIEAVTYR 277 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 H+ S DP YRTR E + R + DPI ++ L+ Sbjct: 278 MGAHTTSDDPTRYRTRAEEDYWR-DRDPIARLHALLV 313 >gi|294501183|ref|YP_003564883.1| 2-oxoisovalerate dehydrogenase E1 component subunit alpha [Bacillus megaterium QM B1551] gi|294351120|gb|ADE71449.1| 2-oxoisovalerate dehydrogenase E1 component alpha subunit [Bacillus megaterium QM B1551] Length = 330 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 94/308 (30%), Positives = 147/308 (47%), Gaps = 9/308 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 EQ L YR MLL R+ +E+ L G V F C GQEA VG +L E D + Sbjct: 11 LTDEQVLEMYRTMLLARKIDERMWLLNRAGKVP-FVISCQGQEAAQVGAAFALNRENDYI 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGA 162 + YR+ G +LA G+ A +M L+G GG H + G V Sbjct: 70 LPYYRDLGVVLAFGMTARDLM--LSGFAKAEDPNSGGRQMPGHFGHKEKRIVTGSSPVTT 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV GIA A + + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ Sbjct: 128 QVPHAVGIALAGRLEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAI 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 V + S R + + +PG +DG D V + +A +GP +IE ++ Sbjct: 188 SVPVEKQLGCAKVSDRAIGYGMPGYTIDGNDALEVYRVVKEARDRASRGEGPTLIETVSE 247 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS D YR EE++E + + DP+ L ++ K++ ++ I+N Sbjct: 248 RLTAHSSDDDDRAYRGAEELSEAKKS-DPLAYFATYLKEVNVLTDEREKQMLDDIMNIVN 306 Query: 342 NSVEFAQS 349 ++ ++A++ Sbjct: 307 DATDYAEN 314 >gi|328950235|ref|YP_004367570.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Marinithermus hydrothermalis DSM 14884] gi|328450559|gb|AEB11460.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Marinithermus hydrothermalis DSM 14884] Length = 369 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/277 (28%), Positives = 140/277 (50%), Gaps = 6/277 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMITAYREHGH 114 YR ML R +E+ L G F G EA VG+ ++ + D + YR+ G Sbjct: 42 YRDMLAARILDERLVILLRTGKTS-FVAPGAGHEAAQVGIAHAVKPKFDWLFPYYRDMGL 100 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +LA G+ A ++ A+ + +KG+ H S + + + + + G A + Sbjct: 101 MLALGIPAVELFAQAIATKADPNKGRQMPFHPGSKEFKVFNVASPIASHIPPAAGAAISM 160 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K R + ++ V FGDGA ++G + N A++ +++ ENN+YA+ + +A N Sbjct: 161 KLRNTGEVAVCTFGDGATSEGDWHAGINFASVQGAPAVFICENNRYAISVGYEKQTASEN 220 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + + ++ +PG VDGMD+ A + +AV R+ GP ++E++ YRY HS + D + Sbjct: 221 IAVKAQAYGMPGYYVDGMDVLASYYVVREAVERARSGHGPALVELVVYRYGPHSSADDDS 280 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGD 328 YR +EE+ ++ DPIE+ R R L + W +E + Sbjct: 281 RYRPKEEVELWKTQKDPIERFR-RFLEKQGLWTAEWE 316 >gi|291295901|ref|YP_003507299.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Meiothermus ruber DSM 1279] gi|290470860|gb|ADD28279.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Meiothermus ruber DSM 1279] Length = 344 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 94/318 (29%), Positives = 153/318 (48%), Gaps = 13/318 (4%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQM 105 + E+ L YR + R F+E+ L G +G + GQEA VG+ + L + D + Sbjct: 19 LSPEELLQGYRALRRARHFDERVLVLQRQGRLGVYPPFR-GQEAAQVGVALCLRPDYDWL 77 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +YRE L G+ SK++ L+ R G +++M FY + Q+ Sbjct: 78 LPSYRESAAALTFGMPISKLI--LSWRADPAGWGAPPNVNMVQ----FYIP---IATQIP 128 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G+A A + D + V GDG ++G +E N AA++ ++ V++NN +A+ Sbjct: 129 QAAGVAHAQRLMGKDAVVAVFIGDGGTSEGDFHEGLNFAAVFEAPLVVVVQNNGWAISVP 188 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + +++ + IPG+ VDG D+ AV + +AV RA GP +IE LTYR Sbjct: 189 TYKQTKVQRIAQKAQGYGIPGVTVDGNDLVAVWSVAREAVNRARAGGGPTLIEALTYRVA 248 Query: 286 GHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 H+ S DP+ YR+ EE E DPI +++ LLH SE + + + +V Sbjct: 249 PHTSSDDPSRYRSEEE-TERWLKRDPILRMKNCLLHLGLWSEAQEEALTEALEAEFLAAV 307 Query: 345 EFAQSDKEPDPAELYSDI 362 E A EP P E+ + Sbjct: 308 EEADRAPEPKPWEIVEQV 325 >gi|254420646|ref|ZP_05034370.1| Dehydrogenase E1 component superfamily [Brevundimonas sp. BAL3] gi|196186823|gb|EDX81799.1| Dehydrogenase E1 component superfamily [Brevundimonas sp. BAL3] Length = 419 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 89/286 (31%), Positives = 145/286 (50%), Gaps = 10/286 (3%) Query: 40 EGFEVSEFNKEQELSAYR----LMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 EG V +N + R M+L R F+++ + + G F C G+EA+ V Sbjct: 71 EGQAVGPWNPRLDPDTLRRGLKAMILTRAFDDRMHRAHRQGKTS-FYMKCTGEEAIAVAQ 129 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFY 154 M L+ D YR+ G ++A G ++M ++ KG+ + M+S K+ GF+ Sbjct: 130 GMLLSREDMGFPTYRQQGLLIARGYPLVEMMNQIYSNAADPIKGRQLPI-MYSAKDYGFF 188 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G +G QV G A A+ Y+ DKI + GDGA +G + + A+++ VI Sbjct: 189 TISGNLGTQVPQAVGWAMASAYKGDDKIAISWIGDGATAEGDFHNALTFASVYRAPVILN 248 Query: 215 IENNQYAMGTSVSRASA-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 I NNQ+A+ + A +T F+ + + + +P ++VDG D AV A A R+++G Sbjct: 249 IVNNQWAISSFQGIAGGLETTFASKAIGYGLPALRVDGNDFLAVWAATQWAEERARSNQG 308 Query: 274 PIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 +IE+ TYR HS S DP+ YR +E +E DP+E++R+ L Sbjct: 309 ATVIELFTYRGAPHSTSDDPSRYRPGDE-HEKWPLGDPLERLRQHL 353 >gi|149911977|ref|ZP_01900573.1| putative pyruvate dehydrogenase E1 component (alpha subunit)oxidoreductase protein [Moritella sp. PE36] gi|149804949|gb|EDM64980.1| putative pyruvate dehydrogenase E1 component (alpha subunit)oxidoreductase protein [Moritella sp. PE36] Length = 368 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 86/282 (30%), Positives = 143/282 (50%), Gaps = 12/282 (4%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 LE ++ ++E + YR ML R F+ KA L G +G + C+GQEAV + + Sbjct: 30 LEHLSIAGVSRELLVEFYRWMLFTRTFDCKAIALQRTGRLGTYAS-CLGQEAVGAAIGKA 88 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 + D I AYRE +L GV +I+ G + G+ KG M T Sbjct: 89 MRAEDVFIQAYRETAAVLIRGVTPEEILMYWGGDERGMD-FKGPREDMPCTIP------- 140 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + +Q GI++A K R+ ++ VV GDGA ++G YES N A +W L ++++I NN Sbjct: 141 -IASQCCHAVGISYAMKLRKEPRVAVVVCGDGATSKGDFYESVNAAGVWQLPLVFIINNN 199 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 Q+A+ S+ +++ ++ I QVDG D+ A + A+ R +GP +IE Sbjct: 200 QWAISLPRDEQSSCETLAQKAIAGGISCEQVDGNDVIACYIKIKAAIDRAREGQGPHLIE 259 Query: 279 MLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 ++YR H+ +D A+ YR+ + + E +P+ ++R L+ Sbjct: 260 TISYRLSDHTTADDASRYRSEDNVGEA-WQKEPMTRLRTLLM 300 >gi|13508132|ref|NP_110081.1| pyruvate dehydrogenase [Mycoplasma pneumoniae M129] gi|2499408|sp|P75390|ODPA_MYCPN RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|1674133|gb|AAB96093.1| Pyruvate dehydrogenase [Mycoplasma pneumoniae M129] gi|301633357|gb|ADK86911.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycoplasma pneumoniae FH] Length = 358 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 87/276 (31%), Positives = 142/276 (51%), Gaps = 16/276 (5%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + EQ A+ LM L R ++K G + F +G+EA+ VGM M L E D Sbjct: 32 LSNEQLKHAFYLMNLSRIMDKKMLVWQRAGKMLNFAP-NLGEEALQVGMGMGLNENDWFC 90 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGIS-KGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +R +L GV +++ G + G + K ++ + T +GAQ S Sbjct: 91 PTFRSGALMLYRGVKPEQLLLYWNGNENGSKIEAKYKTLPINIT----------IGAQYS 140 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G+ + Y++ + V GDG +G+ YE+ NIA++ N ++ I NNQ+A+ T Sbjct: 141 HAAGLGYMLHYKKLPNVAVTMIGDGGTAEGEFYEAMNIASIHKWNSVFCINNNQFAISTR 200 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 SA ++ S + ++ NIP ++VDG D+ A M +A Y R+ GP++IE ++R Sbjct: 201 TKLESAVSDLSTKAIAVNIPRIRVDGNDLIASYEAMHEAANYARSGNGPVLIEFFSWRQG 260 Query: 286 GHSMS-DPANYRTREEINE-MRSNHDPIEQVRKRLL 319 H+ S DP+ YRT+EE E M+S DP++++R L Sbjct: 261 PHTTSDDPSIYRTKEEEAEAMKS--DPVKRLRNFLF 294 >gi|162456284|ref|YP_001618651.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Sorangium cellulosum 'So ce 56'] gi|161166866|emb|CAN98171.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Sorangium cellulosum 'So ce 56'] Length = 351 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/267 (29%), Positives = 133/267 (49%), Gaps = 3/267 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L AYR + +R + + L G VG F C GQEA + +++ D + A RE Sbjct: 15 LRAYREIKRLRLLDARMLLLQRQGRVG-FYGACTGQEATPIATALAVEPTDWIFPALRES 73 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 +L G +A++ G G + +G+ HM + +G Q+ G A+ Sbjct: 74 VMMLVRGFPLRTYVAQVFGNAGDLLQGRQMPSHMSGRQVNQVSWSSCIGPQLPQAVGAAW 133 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K RR + V GDGA ++ + + N AA++ + + +NN +A+ R +A Sbjct: 134 AAKLRRDSTVVVGFMGDGATSEPDFHSAMNFAAVFRAPCVLICQNNHWAISVPTDRQTAS 193 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-D 291 + +G ++ +P ++VDG D+ AV + +AVA R GP IE LTYR HS S D Sbjct: 194 RTIAVKGRAYGVPSVRVDGNDVIAVYRAVSEAVARARGGGGPTFIEALTYRVGAHSSSDD 253 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRL 318 P+ YR++EE++ + DP+ ++ + L Sbjct: 254 PSRYRSQEEVDRW-TQRDPLLRLGRHL 279 >gi|302867913|ref|YP_003836550.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Micromonospora aurantiaca ATCC 27029] gi|302570772|gb|ADL46974.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Micromonospora aurantiaca ATCC 27029] Length = 388 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 84/289 (29%), Positives = 143/289 (49%), Gaps = 16/289 (5%) Query: 32 DCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAV 91 D +P + + +E+ YR M++ RRF+ +A L G + + GQEA Sbjct: 43 DGTPLPARDDYPEPPVETLREM--YRRMVVGRRFDVQATALTKQGRLAVYPS-ARGQEAC 99 Query: 92 IVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTK 150 +G ++L + D + YRE + A G+D +++ L G G + + Sbjct: 100 QIGGVLALRDTDWVFPTYRESMALTARGLDPVEVLTLLRGDWHCGYDPAATHTAPQCTP- 158 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 + Q G+A+ Y+ D + + GDGA ++G +E N AA++ Sbjct: 159 ---------LATQCVHAAGLAYGESYQGRDTVALAFIGDGATSEGDFHEGINFAAVFKAP 209 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 V+Y+++NN+YA+ +SR +A + + +GV + +P QVDG D AV A +++AVA+ RA Sbjct: 210 VVYLVQNNKYAISVPLSRQTAAPSLAYKGVGYGVPSEQVDGNDPVAVLAVLERAVAHARA 269 Query: 271 HKGPIIIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRL 318 KGP ++E TYR H+ D YR +E+ R + DPI ++ L Sbjct: 270 GKGPYLVEAHTYRMEPHTNADDQTRYRDADEVEAWR-DRDPIARLEAYL 317 >gi|315505682|ref|YP_004084569.1| pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit [Micromonospora sp. L5] gi|315412301|gb|ADU10418.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Micromonospora sp. L5] Length = 388 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 84/289 (29%), Positives = 143/289 (49%), Gaps = 16/289 (5%) Query: 32 DCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAV 91 D +P + + +E+ YR M++ RRF+ +A L G + + GQEA Sbjct: 43 DGTPLPARDDYPEPPVETLREM--YRRMVVGRRFDVQATALTKQGRLAVYPS-ARGQEAC 99 Query: 92 IVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTK 150 +G ++L + D + YRE + A G+D +++ L G G + + Sbjct: 100 QIGGVLALRDTDWVFPTYRESMALTARGLDPVEVLTLLRGDWHCGYDPAATHTAPQCTP- 158 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 + Q G+A+ Y+ D + + GDGA ++G +E N AA++ Sbjct: 159 ---------LATQCVHAAGLAYGESYQGRDTVALAFIGDGATSEGDFHEGINFAAVFKAP 209 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 V+Y+++NN+YA+ +SR +A + + +GV + +P QVDG D AV A +++AVA+ RA Sbjct: 210 VVYLVQNNKYAISVPLSRQTAAPSLAYKGVGYGVPSEQVDGNDPVAVLAVLERAVAHARA 269 Query: 271 HKGPIIIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRL 318 KGP ++E TYR H+ D YR +E+ R + DPI ++ L Sbjct: 270 GKGPYLVEAHTYRMEPHTNADDQTRYRDADEVEAWR-DRDPIARLEAYL 317 >gi|225431715|ref|XP_002265166.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296088533|emb|CBI37524.3| unnamed protein product [Vitis vinifera] Length = 481 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 90/318 (28%), Positives = 150/318 (47%), Gaps = 2/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +KE + Y ML ++ + + G + F IG+EA+ V +L+ D + Sbjct: 132 QVSKEVAVKMYATMLTLQVMDTIFYEAQRQGRIS-FYVTSIGEEAINVASAAALSIDDVI 190 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 YRE G +L G + + G + KG+ +H S K+ + V Q+ Sbjct: 191 FPQYREPGVLLWRGFTLQEFANQCFGNKADYGKGRQMPIHYGSNKHNYVTVSSTVATQIP 250 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A++ K D V FGDG ++ G + + N AA+ VI++ NN +A+ T Sbjct: 251 QAVGAAYSLKMDGKDACTVTYFGDGGSSTGDFHAALNFAAVMEAPVIFICRNNGWAISTP 310 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 VS RG + + ++VDG D A+ + A PI+IE LTYR Sbjct: 311 VSDQFRSDGVVVRGRGYGVRSIRVDGNDALAMYTAVHAARKMAITEHRPILIEALTYRAG 370 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HS SD ++ YR EI R DP+ ++R+ + N W S E+ NVRK + +++ Sbjct: 371 HHSTSDDSSKYRPVSEIELWRMARDPVSRLRRWIESNDWWSGEAESELRSNVRKEVLDAI 430 Query: 345 EFAQSDKEPDPAELYSDI 362 + A+ ++P AE+++D+ Sbjct: 431 QVAERVEKPPIAEIFTDV 448 >gi|82750703|ref|YP_416444.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus RF122] gi|82656234|emb|CAI80647.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus aureus RF122] Length = 370 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 146/294 (49%), Gaps = 16/294 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + EQ + M+ R ++++ L G +G F GQEA + + +L + D Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQYALEKED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ ++ A L R G KG + F I+GAQ Sbjct: 99 YILPGYRDVPQIIWHGLPLTE--AFLFSR--GHFKG-----NQFPEGVNALSPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+AFA K R + + GDG ++QG YE N AA + I+VI+NN YA+ Sbjct: 150 YIQAAGVAFALKKRGKYAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A +++ ++ IPG+QVDGMD AV +A A +GP +IE +TYR Sbjct: 210 TPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIE 333 Y H+M+ DP YRT +E E DP+ + RK L NK W + + + IE Sbjct: 270 YGPHTMAGDDPTRYRTSDEDAEW-EKKDPLVRFRK-FLENKGLWNEDKENEVIE 321 >gi|197294720|ref|YP_001799261.1| Pyruvate dehydrogenase E1 component,alpha subunit [Candidatus Phytoplasma australiense] gi|171854047|emb|CAM12020.1| Pyruvate dehydrogenase E1 component,alpha subunit [Candidatus Phytoplasma australiense] Length = 363 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 88/289 (30%), Positives = 144/289 (49%), Gaps = 12/289 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L Y+ M+L R+ + A + G +G + L GQEA VG +L D + YR+ Sbjct: 38 LKMYKTMVLSRQADLAALKYQRQGRMGNYL-LNSGQEASQVGAAAALAPQDWVSPYYRDA 96 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G L GV + G + G K + I+G+ V+LG G+AF Sbjct: 97 GIFLYRGVSLEQFYLYWYGNEKG---------SQLDPKLRILPANIIIGSSVNLGAGLAF 147 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+KY+ + + GDG + N AA++ + ++ +I+NNQY++ S Sbjct: 148 ASKYQNKKEATIATIGDGGTAHEEFNAGLNYAAVFRVPLVVLIQNNQYSISNPRKNISKA 207 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ +F IPGMQVDG D+ AV + +A+ R +GPI+IE + YR HS +D Sbjct: 208 ATLAQKCYAFGIPGMQVDGNDVLAVYVAVKEALQRARDGEGPILIENVAYRLEAHSTNDN 267 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 A+ YR++EE NE R DPI + + L+ + ++ +K+ E ++ I Sbjct: 268 ASVYRSKEEENEWRK-KDPILRFQLYLIKKGYLTQEQVKQTEAEAQQEI 315 >gi|284930752|gb|ADC30691.1| Pyruvate dehydrogenase E1 component alpha subunit [Mycoplasma gallisepticum str. R(high)] Length = 360 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 84/278 (30%), Positives = 143/278 (51%), Gaps = 15/278 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLC--IGQEAVIVGMKMSLTE 101 V + + E+ + AY M L R ++K + G L IG+EA+ +G +++T+ Sbjct: 29 VQKLSDERVIEAYYYMNLSRELDKK---MLTWQRSGKMLTLAPNIGEEALQLGTSLAMTK 85 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D ++ A+R +L GV ++M G + G ++F + +G Sbjct: 86 KDWLVPAFRSGALMLHRGVKPYQLMLYWNGNEKG---------NVFDEGVRVIPINITIG 136 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 AQ S GI +A K + V GDG +G+ YE+ N+A++ ++ + NNQYA Sbjct: 137 AQYSQAAGIGYALKQNKERAAAVTFIGDGGTAEGEFYEAMNLASIHKWQTVFCVNNNQYA 196 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T + SA ++ S + ++ N+P ++VDG D+ A M +A+ Y R+ GPI +E +T Sbjct: 197 ISTRTNLESAVSDLSTKAIAVNMPRVRVDGNDLLACYDAMLEAIEYSRSGMGPIFVEFVT 256 Query: 282 YRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 YR H+ S DP+ YRT++E E DPI +++K L Sbjct: 257 YRQGPHTTSDDPSVYRTKQEEEEEAKKSDPIARIKKFL 294 >gi|83309172|ref|YP_419436.1| pyruvate/2-oxoglutarate dehydrogenase complex [Magnetospirillum magneticum AMB-1] gi|82944013|dbj|BAE48877.1| Pyruvate/2-oxoglutarate dehydrogenase complex [Magnetospirillum magneticum AMB-1] Length = 647 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 90/271 (33%), Positives = 139/271 (51%), Gaps = 24/271 (8%) Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 LIR EE+ LYG G + G H CIGQE V + +L GD +++ +R HGH LA Sbjct: 18 LIRVVEERLLSLYGEGRLHGTVHTCIGQEWTGVSVASALRSGDYILSNHRGHGHYLAWTD 77 Query: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 D ++AE+ GR+ G+ +G+GGS H+ GF+ +GI+G + G+A A++ Sbjct: 78 DVEGLIAEVMGRESGVCRGRGGSQHL--RGQGFF-SNGIIGGMAPVAAGLAMAHRLAGDG 134 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 + V+ GDG QG ++E+ N+AA ++L ++ ++E N A T V A + R Sbjct: 135 GVAVLFIGDGGLGQGALFEALNLAASFSLPLVVLVEANGIAQSTPVDTVQAGSAVG-RAR 193 Query: 241 SFNIPGMQVDGMD----IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 +F I + D + +RAV AT+D A R P++ + T+R HS D + R Sbjct: 194 AFGIEARESDTWNPEDLLRAVSATVDTA----RREGRPLLHLVRTFRLMPHSKGD--DTR 247 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 + I E R DP+ Q W +EG Sbjct: 248 APDLIEEYRLK-DPVTQ---------WLAEG 268 >gi|302867124|ref|YP_003835761.1| dehydrogenase E1 component [Micromonospora aurantiaca ATCC 27029] gi|302569983|gb|ADL46185.1| dehydrogenase E1 component [Micromonospora aurantiaca ATCC 27029] Length = 300 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 86/247 (34%), Positives = 127/247 (51%), Gaps = 9/247 (3%) Query: 60 LLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA-C 118 LLIRRFEE +LY G + G H C+GQE V V + LT GD + + +R HGH LA C Sbjct: 17 LLIRRFEEHLLRLYADGHLAGTTHTCLGQEYVPVALAPLLT-GDFVFSNHRGHGHYLAHC 75 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G D ++AEL GR+GG+ G GGS H+ + + G+ G + G+ Sbjct: 76 G-DPEGLLAELLGREGGVCHGYGGSQHL---RRDRFLSTGVQGESLPAAVGVGLHLNRTG 131 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 D + V GDG +G VYE+ N+AALW + ++ V+E+N+ A T + A T + R Sbjct: 132 QDAMVVAYIGDGTWGEGAVYEALNMAALWRVPLLVVVEHNRIAQSTPTTAQLAGT-IAGR 190 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 F I + + +D+ V+A V RA + P ++ T R HS D + R Sbjct: 191 VAGFGITVSESESLDLTEVRAAAAPHVERVRATRTPHVLVQHTVRLGPHSKGD--DTRPA 248 Query: 299 EEINEMR 305 E++ +R Sbjct: 249 GELDRLR 255 >gi|224083452|ref|XP_002307033.1| predicted protein [Populus trichocarpa] gi|222856482|gb|EEE94029.1| predicted protein [Populus trichocarpa] Length = 378 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 80/284 (28%), Positives = 141/284 (49%), Gaps = 1/284 (0%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 F IG+EA+ + +LT D ++ YRE G +L G + + + +G Sbjct: 63 SFYLTTIGEEAINIASAAALTIDDFVVPQYREPGVLLWRGFTLQQFANQCFSNKDDDCRG 122 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + +H S K ++ + +Q+ G+A++ K D V FGDG +++G + Sbjct: 123 RQMPIHYGSKKLNYFTVASTIASQLPHAVGVAYSLKMDGKDACAVTYFGDGGSSEGDFHA 182 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 + N AA+ V+++ NN +A+ T S RG ++ + ++VDG D A+ + Sbjct: 183 ALNFAAVTEAPVLFICRNNGWAISTPTSDQFRSDGIVVRGEAYGVRSIRVDGNDTLALYS 242 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 T+ A + PI++E LTYR HS SD + YR +EI RS DPI + RK + Sbjct: 243 TVRAAREMAIREQRPILVEALTYRVGHHSTSDDSTKYRPVDEIELWRSARDPIARFRKWI 302 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 N W S E+ NVRK + ++++ A+ ++P ++++D+ Sbjct: 303 ESNGWWSGEAESELRSNVRKQLLDAIQVAERTEKPPLVDIFTDV 346 >gi|76801913|ref|YP_326921.1| 2-oxoacid dehydrogenase E1 component, alpha subunit 2 [Natronomonas pharaonis DSM 2160] gi|76557778|emb|CAI49362.1| probable 2-oxoacid dehydrogenase E1 component, alpha subunit 2 [Natronomonas pharaonis DSM 2160] Length = 379 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 93/336 (27%), Positives = 162/336 (48%), Gaps = 25/336 (7%) Query: 37 PFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 P ++G+E + ++ +R M L R F+E+ L G +G + L GQEA G Sbjct: 26 PLVDGYE-PPLSDDRLRELHRDMRLARHFDERMVSLQRQGRIGTYAPLA-GQEAAQFGSM 83 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 +L + D + YREHG ++ G A I + G + + H + N Sbjct: 84 YALDDDDWVSYQYREHGAVIDRGGLADYIRYWMGYESGNATLVE----HNIAPLNI---- 135 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + A V G+A+A K R D+ V FGDGA ++G +E NIA ++++ ++V Sbjct: 136 --SIAAHVPHAVGMAWAAKLRGDDRAVVCHFGDGATSEGDFHEGANIAGVFDVPAVFVCN 193 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--- 273 NNQ+A+ + +A F+ + ++ PG++VDGMD A MD+A+ ++ Sbjct: 194 NNQWAISVPQAAQTASDTFAAKAEAYGFPGVRVDGMDPLATYEVMDEALDRAKSDDERPT 253 Query: 274 -------PIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 P ++E + YR+ H+ + DP+ YRT E + R DP+ + L Sbjct: 254 DAGTASRPSLVEAVQYRFGAHTTADDPSAYRTDEAVERWR-RWDPLPRFEGFLREFGLLD 312 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 + + +E +V + ++V+ A + EPDP +L++D Sbjct: 313 DEAVSAVESDVEATVADAVDQAMA-VEPDPDDLFAD 347 >gi|150389067|ref|YP_001319116.1| pyruvate dehydrogenase (acetyl-transferring) [Alkaliphilus metalliredigens QYMF] gi|149948929|gb|ABR47457.1| Pyruvate dehydrogenase (acetyl-transferring) [Alkaliphilus metalliredigens QYMF] Length = 362 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 82/277 (29%), Positives = 144/277 (51%), Gaps = 12/277 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + +KEQ + Y+LM+ R + KA G + + IGQEA VG L + D Sbjct: 29 MPDISKEQMMEMYQLMIQTREADLKALMYQRQGRMLTYAP-NIGQEAAQVGSAFPLKKED 87 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M+ A+RE G L G I G + G + + S + + Sbjct: 88 WMVPAFRELGAWLTRGAKLEMIYLYWYGNEFGSYMPEDLKILPVSVP---------IASH 138 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 ++ GIA+A+K + D++ + FGDGA +QG +E+ N A ++ + V+++ +NNQ+A+ Sbjct: 139 LNHAAGIAWASKLQGKDEVTITYFGDGATSQGDFHEAMNWAGVYQVPVVFLCQNNQFAIS 198 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 ++ +++ +++ +PG+ VDG DI A+ A + +A R +GP +IE TYR Sbjct: 199 VPRGIQTSSETIAQKALAYGMPGILVDGNDIFAMYAAVKEAFDRARRGEGPTLIEAFTYR 258 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 H+ S DP YR+ EE+ + + DPI++++K L+ Sbjct: 259 IGAHTTSDDPKRYRSDEEVEKWKKK-DPIDRMKKYLM 294 >gi|311744499|ref|ZP_07718299.1| pyruvate dehydrogenase complex E1 component alpha subunit [Aeromicrobium marinum DSM 15272] gi|311312118|gb|EFQ82035.1| pyruvate dehydrogenase complex E1 component alpha subunit [Aeromicrobium marinum DSM 15272] Length = 371 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 98/318 (30%), Positives = 150/318 (47%), Gaps = 22/318 (6%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR ++L+RR + +A L G +G +GQEA VG +L D YR+HG Sbjct: 42 YRDLVLVRRVDTEAYALQRHGELG-LWPPSLGQEACQVGSARALRRQDFAFPTYRDHGVA 100 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + GV K++ G G+S G +G+ I+GAQ G A Sbjct: 101 WSRGVPPEKLL----GLYRGVSLGG-----WDPADHGYALPAIIIGAQTLHAAGYAMGVT 151 Query: 176 Y--------RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 + D + GDGA +QG V E+ + AA++ L V+++IENNQYA+ + V+ Sbjct: 152 FDGDVGTGDPDRDTAVIAYLGDGATSQGDVNEALDWAAVFGLPVVFLIENNQYAISSPVA 211 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R SA ++R F +PG++VDG D+ A A A+ R +G +IE +TYR H Sbjct: 212 RQSA-VPLAQRAEGFGLPGVRVDGNDVLACHAVTSAALTRARDGEGATLIEAVTYRMGAH 270 Query: 288 SMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + S DP YR E E S DP+ +VR+ L W E +++ + Sbjct: 271 TTSDDPGRYREAAETEEW-SARDPLLRVRRHLESVDW-PESFFDDLDTEADDLGERLRAA 328 Query: 347 AQSDKEPDPAELYSDILI 364 ++ EPD A L+ + + Sbjct: 329 CRALPEPDLATLFDRVHV 346 >gi|226941190|ref|YP_002796264.1| Pyruvate dehydrogenase E1 component alpha subunit [Laribacter hongkongensis HLHK9] gi|226716117|gb|ACO75255.1| Pyruvate dehydrogenase E1 component alpha subunit [Laribacter hongkongensis HLHK9] Length = 353 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 87/300 (29%), Positives = 148/300 (49%), Gaps = 16/300 (5%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F+ + YR M L R F+ +A L G + + +G+EA VG+ + D ++ Sbjct: 28 FDPAALVPVYRAMTLTRVFDARAVALQRTGQLRTYPS-SLGEEASRVGLASVMRAEDVLL 86 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G +L G+ ++ +G + G F+ + + +Q Sbjct: 87 PTYRDTGALLWRGLALDCVLLYWSGDERGSD---------FAGPREDFPVAVPIASQCLH 137 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A A YRR ++ V C GDGA ++G YE+ N A + NL V++VI NNQ+A+ Sbjct: 138 AVGVAAAFAYRRQPRVAVCCLGDGATSKGDFYEAVNAAGVMNLPVVFVIVNNQWAISVPR 197 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R + +++ ++ +PG+Q DG DI AV+ T+ +AV RA G ++E LTYR Sbjct: 198 QRQTRAETLAQKAIAAGVPGVQCDGNDIVAVRQTVGQAVERARAGHGASVVECLTYRLAD 257 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRL----LHNKWASEGDLKEIEMNVRKIIN 341 H+ +D A YR E++ + +P+ ++R+ L L K E L E + V++ + Sbjct: 258 HTTADDARRYRPEAEVSAAWAG-EPLVRLRRFLTAEGLWTKEDEEALLAETQAAVQQAVT 316 >gi|251796332|ref|YP_003011063.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Paenibacillus sp. JDR-2] gi|247543958|gb|ACT00977.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Paenibacillus sp. JDR-2] Length = 337 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 151/307 (49%), Gaps = 14/307 (4%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 + EQ + Y +M+L R+F+E+ L G + F IGQE V +L E D Sbjct: 16 LSNEQAVEMYAMMMLARKFDERNLLLQRAGKIN-FHVSGIGQEVAQVAAAFALDRENDYF 74 Query: 106 ITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR++G +LA G+ ++M + + + S G+ H S + G V QV Sbjct: 75 LPYYRDYGFVLAVGMTVKELMLSVFAKAEDPNSGGRQMPGHFGSKRLRIVTGSSPVTTQV 134 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 GIA A K + + V FG+G++NQG +E N A + L VI + ENNQYA+ Sbjct: 135 PHAVGIALAAKMKNKPIVSFVTFGEGSSNQGDFHEGCNFAGVHKLPVILMCENNQYAISV 194 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMD----IRAVKATMDKAVAYCRAHKGPIIIEML 280 V + + R + + PG QVDG D R VK ++A+ A +GP +IE + Sbjct: 195 PVHKQLG-GRVADRALGYGFPGYQVDGNDALEVFRVVKEARERAI----AGEGPTLIEAM 249 Query: 281 TYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 YR HS SD YRT+EE++E RS D I + + L +E E+ +RK+ Sbjct: 250 MYRLSPHSTSDNDLAYRTKEEVDENRSK-DGIPKYKTYLEECGLWNEELEAELLARIRKM 308 Query: 340 INNSVEF 346 ++ + E+ Sbjct: 309 VDEATEY 315 >gi|228474249|ref|ZP_04058984.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus hominis SK119] gi|314936717|ref|ZP_07844064.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus hominis subsp. hominis C80] gi|228271608|gb|EEK12955.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus hominis SK119] gi|313655336|gb|EFS19081.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus hominis subsp. hominis C80] Length = 370 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 94/294 (31%), Positives = 146/294 (49%), Gaps = 16/294 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + EQ + M+ R ++++ L G +G F GQEA + + +L + D Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQYALEKED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + A L R G KG + F + I+GAQ Sbjct: 99 FILPGYRDVPQLIWHGLPLTD--AFLFSR--GHFKG-----NQFPEGVNAFSPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+AF K R + + GDG ++QG YE N A+ + I+VI+NN YA+ Sbjct: 150 YIQTAGVAFGIKKRGKKAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A T +++ ++ IPG+QVDGMD AV +A +GP +IE +TYR Sbjct: 210 TPRSKQTAATTLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAINGEGPTLIETMTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIE 333 Y H+M+ DP YRT +E E DP+ + RK L NK W+ E + + IE Sbjct: 270 YGPHTMAGDDPTRYRTSDEDAEW-EKKDPLVRFRK-FLENKGLWSEEKENEVIE 321 >gi|94985661|ref|YP_605025.1| pyruvate dehydrogenase (lipoamide) [Deinococcus geothermalis DSM 11300] gi|94555942|gb|ABF45856.1| 2-oxoisovalerate dehydrogenase, OdbA [Deinococcus geothermalis DSM 11300] Length = 361 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 88/312 (28%), Positives = 145/312 (46%), Gaps = 12/312 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YRLM R F+E+A LY G +G F G EA VG +LT D + YR+ Sbjct: 41 LKLYRLMRRARHFDERAWVLYRTGRMGVFPPYG-GMEASQVGTAAALTHADWLFPTYRDT 99 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G L G+ + +A + G +M FY + Q G A Sbjct: 100 GAALTYGLPLEQTIAYWR------TSPHGWAMPQHLKILPFYIP---IATQYPQAVGAAL 150 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K + + + + GDG +++G +E+ N A N +++++NN +A+ + Sbjct: 151 AEKRQGTRNVAMAYIGDGGSSEGDFHEALNFAGALNAPCVFILQNNGWAISVPTRTQTRA 210 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-D 291 TN S R + IPG++VDG D+ A +AV R +GP +IE +TYR + H+++ D Sbjct: 211 TNLSLRAQGYGIPGVRVDGNDVLATYQVTLEAVNRARNGEGPTLIETVTYRVKPHTVADD 270 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 P+ YR+ + + DP+ +++ LL +E + EI + +++ A Sbjct: 271 PSRYRSDADTAGWDAK-DPVRRLQTHLLTEGHLTEKEDAEITREIEAEFEAALQVADRFP 329 Query: 352 EPDPAELYSDIL 363 EP PAE+ + Sbjct: 330 EPTPAEIVDHVF 341 >gi|239636403|ref|ZP_04677405.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus warneri L37603] gi|239597758|gb|EEQ80253.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus warneri L37603] Length = 370 Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 94/294 (31%), Positives = 148/294 (50%), Gaps = 16/294 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + E+ + M+ R ++++ L G +G F GQEA + + +L + D Sbjct: 40 VPDLTDEELVELMEKMVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQYALEKED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ ++ A L R G KG + F I+GAQ Sbjct: 99 FILPGYRDVPQIIWHGLPLTE--AFLFSR--GHFKG-----NQFPEGVNALSPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+AF K R + + + GDG ++QG YE N A+ + I+VI+NN YA+ Sbjct: 150 YVQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A T+ +++ ++ IPG+QVDGMD AV +A A +GP +IE +TYR Sbjct: 210 TPRSKQTAATSLAQKAIAVGIPGIQVDGMDALAVYQATKEARERAVAGEGPTLIETMTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIE 333 Y H+M+ DP YRT +E E DP+ + RK L NK W + + + IE Sbjct: 270 YGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRK-FLENKGLWNEDKENEVIE 321 >gi|218186540|gb|EEC68967.1| hypothetical protein OsI_37710 [Oryza sativa Indica Group] Length = 479 Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 152/325 (46%), Gaps = 2/325 (0%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 + G E +KE L Y M+ ++ + + G + F G+EA+ + + Sbjct: 124 ISGSRFQEVSKELALKMYSEMVTLQVMDTIFFEAQRQGRIS-FYLTSHGEEAINIASAAA 182 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 LT D ++ YRE G +L G + + G + KG+ +H S + ++ Sbjct: 183 LTIDDIVLPQYREPGVLLWRGFTLQEFANQCFGNKLDYGKGRQMPIHYGSNRLNYFTVSS 242 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + Q+ G A++ K + D + FGDG ++G + + N AA+ VI+ NN Sbjct: 243 PIATQLPHAVGAAYSLKMDKKDACAITYFGDGGTSEGDFHAALNFAAVMEAPVIFFCRNN 302 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +A+ T S RG ++ + ++VDG D AV + + A PI++E Sbjct: 303 GWAISTPTSEQFRSDGAVIRGQAYGMRSIRVDGNDALAVYSAVHTAREMAIKEGRPILVE 362 Query: 279 MLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 LTYR HS SD + YR +EI R+ DPI + RK + N W + D E+ NVR Sbjct: 363 ALTYRVGHHSTSDDSTKYRPVDEIEHWRTARDPISRYRKWVQGNGWWCDEDESELRNNVR 422 Query: 338 KIINNSVEFAQSDKEPDPAELYSDI 362 + + +++ A+ +P AEL++D+ Sbjct: 423 QELLKAIQVAERMPKPPLAELFTDV 447 >gi|328542702|ref|YP_004302811.1| Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [polymorphum gilvum SL003B-26A1] gi|326412448|gb|ADZ69511.1| Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit [Polymorphum gilvum SL003B-26A1] Length = 366 Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 152/300 (50%), Gaps = 13/300 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L R F+EKA L G +G F +GQEAV VG+ ++ D ++ ++RE G Sbjct: 47 YRAMVLTRAFDEKAVALQRTGRLGTFAS-SLGQEAVSVGLAAAMRAEDILVPSFREQGAQ 105 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L GV A++I GG +G F+ + V +Q G A A K Sbjct: 106 LWRGVSATEIFLFW----GGDERGSD-----FAGPRQDFPVCIPVASQFPHAVGAALALK 156 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R ++ V GDGA ++G YE+ NIA W + ++VI +NQ+A+ +A Sbjct: 157 LRGEPRVAVCVAGDGATSKGDFYEALNIAGAWAVPAVFVIADNQWAISVRRQAQTAAGTL 216 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-N 294 +++ V+ IPG QVDG D+ AV+A + +AV R +GP ++E +TYR H+ +D A Sbjct: 217 AQKAVAAGIPGEQVDGNDVVAVRAVVARAVERARLGEGPSLVEAITYRLADHTTADDARR 276 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR E++E +P+ ++R L+ W E + + +E + R + + + + P Sbjct: 277 YRDPAEVSE-HWKEEPVARLRNHLIALGAWTREDEERALEDSQRLVAEAAEAYLATPPAP 335 >gi|170726628|ref|YP_001760654.1| 3-methyl-2-oxobutanoate dehydrogenase [Shewanella woodyi ATCC 51908] gi|169811975|gb|ACA86559.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Shewanella woodyi ATCC 51908] Length = 392 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 77/269 (28%), Positives = 135/269 (50%), Gaps = 2/269 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA I+G SL D ++ YREH + G + M +L + + KG+ Sbjct: 78 FYMTCTGEEASIIGSAASLDNDDVILAQYREHAALRYRGFTTEQFMNQLFSNEKDLGKGR 137 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S++ + + Q+ TG+ ++ K + I + FG+GAA++G + Sbjct: 138 QMPIHYGSSELNYQTISSPLATQIPQATGVGYSLKMQGKRNIAICYFGEGAASEGDFHAG 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+AA+ I+ NN YA+ T S + RG + + ++VDG D+ AV A Sbjct: 198 LNMAAVLKSPTIFFCRNNGYAISTPTSEQFMGNGIASRGPGYGMHTIRVDGNDMLAVLAA 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A AY + P++IE +TYR HS S DP+ YR+++E + + HDP+++ + ++ Sbjct: 258 TQQARAYAVENNAPVLIEAMTYRLGAHSSSDDPSGYRSKDEEAKWQ-QHDPVKRFKLWMI 316 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 + W +E E+ R + V+ A+ Sbjct: 317 NKGWLTEKQDSELFEKYRSEVLAEVKVAE 345 >gi|220913649|ref|YP_002488958.1| pyruvate dehydrogenase (acetyl-transferring) [Arthrobacter chlorophenolicus A6] gi|219860527|gb|ACL40869.1| Pyruvate dehydrogenase (acetyl-transferring) [Arthrobacter chlorophenolicus A6] Length = 409 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 87/312 (27%), Positives = 148/312 (47%), Gaps = 12/312 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+AY +++ RR ++ L G + + GQEA V + L +GD M YR+ Sbjct: 76 LAAYEQLVVGRRVNDQNSALVRQGRMAVYPS-SHGQEACQVAAALCLGDGDWMFPTYRDA 134 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 ++ GVD ++M G G + + ST + Q+ G+A Sbjct: 135 VAVMTRGVDPVQVMTIFRGDWHGGYDPLQYKVGIQSTP---------LTTQLLHAVGVAH 185 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D + + GDGA ++G +E+ N AA+++L VI+ ++NN+YA+ ++ S Sbjct: 186 AAKLRGEDTVVLAMCGDGATSEGDFHEALNFAAVFHLPVIFFVQNNKYAISVPLAHQSVA 245 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSD 291 + + + V + + G +VDG D+ A+ A +D+AVA CR GP+++E TYR + H+ D Sbjct: 246 PSLAHKAVGYGMAGERVDGNDVVALLAVLDRAVALCRDGSGPLLVEANTYRMQAHTNADD 305 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 YR E+ E R+ DP+ ++R L + I + E D Sbjct: 306 DTRYRESAEVAEWRAK-DPVNRMRTYLTGQGILDDDGEARIRAKAESVAAQLREGLSEDV 364 Query: 352 EPDPAELYSDIL 363 DP +L+ + Sbjct: 365 PVDPQDLFRHVF 376 >gi|332686439|ref|YP_004456213.1| pyruvate dehydrogenase E1 component subunit alpha [Melissococcus plutonius ATCC 35311] gi|332370448|dbj|BAK21404.1| pyruvate dehydrogenase E1 component alpha subunit [Melissococcus plutonius ATCC 35311] Length = 369 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 93/323 (28%), Positives = 155/323 (47%), Gaps = 19/323 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + EQ + M+ R ++++ L G +G F GQEA + + ++ + D Sbjct: 39 MPDLSDEQLIELMTRMVWARVLDQRSTALNRQGRLG-FYAPTAGQEASQLASQFAMEKED 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + G G ++++ I+GAQ Sbjct: 98 YLLPGYRDVPQLVQHGLPLKEAFLWSRGHMAG---------NLYADDLYALPPQIIIGAQ 148 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 GIA K R + GDG ++QG YE+ N ++ N +++I+NN +A+ Sbjct: 149 YIQAAGIALGMKKRNKKNVVFSYTGDGGSSQGDFYEAINFTGAYHANGVFIIQNNGFAIS 208 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S SA +++ V+ IPG+QVDGMD AV A +A + A GP++IE LTYR Sbjct: 209 TPRSLQSAAQTLAQKAVAAGIPGIQVDGMDPLAVYAVAKEARDWASAGNGPVLIETLTYR 268 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNVRKII 340 Y H++S DP YR++E +E + DP+ + R L N W+ E + K IE +I Sbjct: 269 YGPHTLSGDDPTRYRSKELDSEWQEK-DPLIRFRNYLTEKNLWSEEKEEKVIEQTKEEIK 327 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 A S+ + P + SD L Sbjct: 328 Q-----AISEADKIPKQKVSDFL 345 >gi|226362326|ref|YP_002780104.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Rhodococcus opacus B4] gi|226240811|dbj|BAH51159.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Rhodococcus opacus B4] Length = 372 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 85/264 (32%), Positives = 137/264 (51%), Gaps = 12/264 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M+L RRF+++A L G + + GQEA + MSL GD M YR+ + Sbjct: 50 HRNMVLGRRFDQQATALTKQGRLAVYPS-SRGQEACQIAAAMSLRPGDWMFPTYRDSVAL 108 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 A G+D +I++ L+G G + H + + + Q+ TG+A+ Sbjct: 109 AARGIDPVEILSMLSG---DWHCGYDPAAHRSAPQCT------PLATQLLHATGVAYGEH 159 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R D I + GDGA ++G +E+ N AA++ V+++++NN +A+ ++R SA Sbjct: 160 RRGRDTIALAFCGDGATSEGDFHEALNFAAVFKAPVVFLVQNNGFAISVPLARQSAAPTL 219 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 + +GV + I QVDG D A+ A MD+A + RA GP+I+E TYR H+ +D A Sbjct: 220 AHKGVGYGIGSEQVDGNDPVAMLAVMDEAARFVRAGNGPVIVEAHTYRIDAHTNADDATR 279 Query: 295 YRTREEINEMRSNHDPIEQVRKRL 318 YR E+ E DP+ ++ K L Sbjct: 280 YRDSSEV-EQWLGRDPLARLEKYL 302 >gi|71652867|ref|XP_815082.1| pyruvate dehydrogenase E1 component alpha subunit [Trypanosoma cruzi strain CL Brener] gi|70880109|gb|EAN93231.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Trypanosoma cruzi] Length = 190 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 70/173 (40%), Positives = 110/173 (63%), Gaps = 3/173 (1%) Query: 193 NQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 NQGQV+E+ NIAA+ + VI+ ENNQ+ MGTS RA+ Q +RG IPG+QVDGM Sbjct: 3 NQGQVFEAMNIAAIHRIPVIFCCENNQFGMGTSKERAAYQPEMYRRGDY--IPGLQVDGM 60 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPI 311 D+ AV+ A +C + KGPI++E +YRY GHSMSDP + YR + +I ++R D I Sbjct: 61 DVLAVQEGTRWAKEWCLSGKGPIVLEFDSYRYVGHSMSDPDSQYRKKSDIQDVRKTRDCI 120 Query: 312 EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 +++ +L ++ ++K++E +V+K ++ + A+ +EL++DI I Sbjct: 121 HKMKDFMLGEGIMTDEEMKKLEKDVKKEVDQQLLPAEKQNPTPRSELFTDIYI 173 >gi|319955314|ref|YP_004166581.1| pyruvate dehydrogenase (acetyl-transferring) [Cellulophaga algicola DSM 14237] gi|319423974|gb|ADV51083.1| Pyruvate dehydrogenase (acetyl-transferring) [Cellulophaga algicola DSM 14237] Length = 658 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 83/323 (25%), Positives = 161/323 (49%), Gaps = 7/323 (2%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 + +S+ +K Q Y+ +LL R EEK L G + + IGQEA+ VG+ +L Sbjct: 6 YTISDHSKIQ---LYKQLLLPRMIEEKMLILLRQGKITKWFS-GIGQEAISVGVTAALHV 61 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 + ++ +R G + SK+ ++ G+ G +KG+ S H S G +G Sbjct: 62 DEYILPMHRNLGVFTTRNIPLSKLFSQWQGKANGFTKGRDRSFHFGSQAYKIIGMISHLG 121 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ + GIA AN +++ ++ V G+GA ++G +E+ N+A++WNL V++ +ENN Y Sbjct: 122 PQLGVADGIALANVLKKNKQVTAVFTGEGATSEGDFHEALNVASVWNLPVLFCVENNGYG 181 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T + N + +G+ + + +DG +I V + ++ R + P+++E T Sbjct: 182 LSTPTNEQFKCKNIADKGIGYGMESHIIDGNNILEVFSRVNAICLDLRENPRPVLLEFKT 241 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 +R RGH + Y +++ + DPI L+ +K S + ++ +++ I Sbjct: 242 FRMRGHEEASGTKY-VPQDLLDTWEKKDPIANYESYLIASKIISSDSVAHLKTKIQQEIE 300 Query: 342 NSVEFAQSDKE--PDPAELYSDI 362 + ++ A ++E DP + D+ Sbjct: 301 DELQIAFHEEELLLDPEKELQDV 323 >gi|323137075|ref|ZP_08072155.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylocystis sp. ATCC 49242] gi|322397836|gb|EFY00358.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylocystis sp. ATCC 49242] Length = 355 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 92/294 (31%), Positives = 138/294 (46%), Gaps = 14/294 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M R F+ KA L G +G F +GQEAV VG+ ++ D ++ +YR+H Sbjct: 34 LRFYRAMTKSRVFDGKAIALQRTGKLGTFAS-SLGQEAVGVGVASAMEARDVLVPSYRDH 92 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G+ M E GG +G FS + V QV+ G A+ Sbjct: 93 AAQFLRGM----TMVECLLYWGGDERGSD-----FSASRSDFPNCVPVATQVAHAVGAAY 143 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K + +++ V GDG G YE N+A +W V+ VI NN +A+ T + SA Sbjct: 144 AFKRKGENRVAVCFIGDGGTANGGFYEPLNMAGVWKTPVVIVINNNGWAISTPRTLESAA 203 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++GV+ + G+QVDG D+ AV +A+ R+ GP +IE LTYR H+ +D Sbjct: 204 ETLAQKGVAAGVEGLQVDGNDVLAVYDAARRAIEKARSGGGPTVIEALTYRLGDHTTADD 263 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGD---LKEIEMNVRKIINN 342 A EI + +P+ ++R L+ W E + LKE V K + Sbjct: 264 ATRYRDPEIVQREWGREPVARLRNLLVDTGLWTPEKETALLKECAEEVEKAVEK 317 >gi|120405040|ref|YP_954869.1| pyruvate dehydrogenase [Mycobacterium vanbaalenii PYR-1] gi|119957858|gb|ABM14863.1| Pyruvate dehydrogenase (acetyl-transferring) [Mycobacterium vanbaalenii PYR-1] Length = 361 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 84/267 (31%), Positives = 130/267 (48%), Gaps = 12/267 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M++ R + + L G + F C GQEA +G L + D + YRE G Sbjct: 42 YESMVVTRELDTEFVNLQRQGELALFAS-CRGQEAAQIGAAACLRKTDWLFPQYRELGAF 100 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L + +++ A GR G G G + + + G HG+ G A A + Sbjct: 101 LVRAIAPAQLGALWRGRWHG---GLGFTDRCVAPVSIPIGTHGL------HAVGAAMAAQ 151 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 D + V GDGA ++G +E+ N+AA++ ++ ++NNQ+A+ V R A Sbjct: 152 RLGEDSVTVAFLGDGATSEGDAHEALNLAAVFGAPCVFFVQNNQWAISVPVERQHAGPTL 211 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + R + + +PG++VDG D+ A A M++A A R GP IE +TYR H+ S DP Sbjct: 212 AHRAIGYGMPGVRVDGNDVLACFAVMEQAAARAREGGGPTFIEAVTYRMGPHTTSDDPTR 271 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHN 321 YR+ EE+ R+ DPI + R L H Sbjct: 272 YRSDEEVEHWRAR-DPIARYRTYLEHT 297 >gi|115487674|ref|NP_001066324.1| Os12g0183100 [Oryza sativa Japonica Group] gi|77553175|gb|ABA95971.1| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor, putative, expressed [Oryza sativa Japonica Group] gi|108862262|gb|ABA95970.2| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor, putative, expressed [Oryza sativa Japonica Group] gi|113648831|dbj|BAF29343.1| Os12g0183100 [Oryza sativa Japonica Group] Length = 486 Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 151/325 (46%), Gaps = 2/325 (0%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 + G E +KE L Y M ++ + + G + F G+EA+ + + Sbjct: 131 ISGSRFQEVSKELALKMYNEMATLQVMDTIFFEAQRQGRIS-FYLTSHGEEAINIASAAA 189 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 LT D ++ YRE G +L G + + G + KG+ +H S + ++ Sbjct: 190 LTIDDIVLPQYREPGVLLWRGFTLQEFANQCFGNKLDYGKGRQMPIHYGSNRLNYFTVSS 249 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + Q+ G A++ K + D + FGDG ++G + + N AA+ VI+ NN Sbjct: 250 PIATQLPHAVGAAYSLKMDKKDACAITYFGDGGTSEGDFHAALNFAAVMEAPVIFFCRNN 309 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +A+ T S RG ++ + ++VDG D AV + + A PI++E Sbjct: 310 GWAISTPTSEQFRSDGAVIRGQAYGMRSIRVDGNDALAVYSAVHTAREMAIKEGRPILVE 369 Query: 279 MLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 LTYR HS SD + YR +EI R+ DPI + RK + N W + D E+ NVR Sbjct: 370 ALTYRVGHHSTSDDSTKYRPVDEIEHWRTARDPISRYRKWVQGNGWWCDEDESELRNNVR 429 Query: 338 KIINNSVEFAQSDKEPDPAELYSDI 362 + + +++ A+ +P AEL++D+ Sbjct: 430 QELLKAIQVAERMPKPPLAELFTDV 454 >gi|330683975|gb|EGG95737.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus epidermidis VCU121] Length = 370 Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 94/294 (31%), Positives = 147/294 (50%), Gaps = 16/294 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + E+ + M+ R +++ L G +G F GQEA + + +L + D Sbjct: 40 VPDLTDEELVELMERMVWTRILDQRTISLNRQGRLG-FYAPTAGQEASQLASQYALEKED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ ++ A L R G KG + F I+GAQ Sbjct: 99 FILPGYRDVPQIIWHGLPLTE--AFLFSR--GHFKG-----NQFPEGVNALSPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+AF K R + + + GDG ++QG YE N A+ + I+VI+NN YA+ Sbjct: 150 YVQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A T+ +++ ++ IPG+QVDGMD AV +A A +GP +IE +TYR Sbjct: 210 TPRSKQTAATSLAQKAIAVGIPGIQVDGMDALAVYQATKEARERAVAGEGPTLIETMTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIE 333 Y H+M+ DP YRT +E E DP+ + RK L NK W + + + IE Sbjct: 270 YGPHTMAGDDPTRYRTSDEDAEW-EKKDPLVRFRK-FLENKGLWNEDKENEVIE 321 >gi|119385771|ref|YP_916826.1| transketolase, central region [Paracoccus denitrificans PD1222] gi|119376366|gb|ABL71130.1| Transketolase, central region [Paracoccus denitrificans PD1222] Length = 617 Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 117/221 (52%), Gaps = 1/221 (0%) Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +L D++I YR HG L GV A + AEL R+ G++ G+ GS + + F G + Sbjct: 3 ALGPCDRVIATYRGHGWALETGVPAQEFFAELCHRKAGVNGGRSGSALVTAPNQRFIGEN 62 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 IVGA + GIA A K +D++C+V FGDGA +QG ++E+F AA + L VI+V EN Sbjct: 63 SIVGAGGPIACGIALAAKMEGADRVCLVTFGDGATSQGALHEAFVFAAAYKLPVIFVCEN 122 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N ++ T + ++R + + +DG D AVK ++ A A KGP +I Sbjct: 123 NGWSEMTPTLSITGLDRLARRANGYGMASATIDGTDPMAVKDSIALARAAVLGGKGPALI 182 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 E R GH D +YR + + + R+ DP+ + RL Sbjct: 183 ECRVPRLWGHYNRDIEHYRPKSDREDSRA-RDPLALLEARL 222 >gi|50364854|ref|YP_053279.1| pyruvate dehydrogenase E1 alpha subunit [Mesoplasma florum L1] gi|50363410|gb|AAT75395.1| pyruvate dehydrogenase E1 alpha subunit [Mesoplasma florum L1] Length = 370 Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 91/301 (30%), Positives = 149/301 (49%), Gaps = 17/301 (5%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMITA 108 E+ + AY +M L RR ++ ++ G + F GQEA V M + + D ++ Sbjct: 36 EELIKAYSIMNLSRRQDDYQNKMQRQGRLLSFLS-STGQEACEVAYTMVIDPKNDFFVSG 94 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR + L G IM G + G +G + + I+G+Q S T Sbjct: 95 YRNNAAWLTMGQTVRNIMLYWAGNEAGAKAPEGVNS---------LPPNIIIGSQYSQAT 145 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 GIAFA KY+ + V GDG ++G+ YE+ N A L L V++V ENN++A+ T + Sbjct: 146 GIAFAEKYQGKKGVAVTTTGDGGMSEGETYEAMNFAKLHELPVVFVCENNKWAISTPTVQ 205 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + N + + ++ P ++VDG D A A +AV + R+ GP++IE TYR HS Sbjct: 206 QTKSLNIAVKAIATGTPSIKVDGNDFLASYAVAKEAVEFARSGNGPVLIEFDTYRLGAHS 265 Query: 289 MSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINNSVEF 346 SD P YR + E E R ++P+ +++ ++ W+ E K+ +N + + + EF Sbjct: 266 SSDAPDVYRPKGEF-EDRVPYEPLIRLKAYMIEKGIWSEE---KQTALNEEQDKHIAAEF 321 Query: 347 A 347 A Sbjct: 322 A 322 >gi|301058803|ref|ZP_07199789.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [delta proteobacterium NaphS2] gi|300447088|gb|EFK10867.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [delta proteobacterium NaphS2] Length = 351 Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 96/350 (27%), Positives = 148/350 (42%), Gaps = 47/350 (13%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K ++ YR ML RR EE L+ G + G HL IG+E + G+ L +GD + Sbjct: 2 KPDSVALYRKMLTCRRVEEAIAGLWYEGRISGEMHLGIGEEGINAGVLDHLGDGDAVALD 61 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R ++ GVD + I+ E G G+ G GG MH+FS K GIVGA Sbjct: 62 HRGTAGMVLRGVDPAAIVKECMGSVDGLCCGNGGHMHLFS-KQHLAASSGIVGAAGPAAC 120 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G A A + R + V FG+GA NQG + E+ N+A W+L V++V +N A+ T+ S Sbjct: 121 GFALAAQQLRPGTVAVAFFGEGAMNQGMLMEAMNLATAWDLPVLFVCRDNGMAI-TTASA 179 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + + R + G VDG D V + + R +GP + R GH Sbjct: 180 SVTGGDLQMRARGLGVSGRSVDGADAEMVWRVAGELIDRARRGRGPAFLRATCTRPEGHF 239 Query: 289 MSDPANYRTREEINEMRSN----------------------------------------- 307 + DP R + +++ Sbjct: 240 LGDPLVRMARSPLAQLKPRLGPLVAAARSAEGAPMAQRVASLGKITSMLGRAVRTELGPA 299 Query: 308 HDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 HDP+ ++RKRL A L ++E V I+ ++V+ A + + + E Sbjct: 300 HDPVRRLRKRLTITSEA----LVKLEHEVEGIVKDAVDKALTSETANEKE 345 >gi|88860202|ref|ZP_01134841.1| 2-oxoisovalerate dehydrogenase alpha subunit (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) [Pseudoalteromonas tunicata D2] gi|88818196|gb|EAR28012.1| 2-oxoisovalerate dehydrogenase alpha subunit (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) [Pseudoalteromonas tunicata D2] Length = 397 Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 93/334 (27%), Positives = 152/334 (45%), Gaps = 14/334 (4%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V + N+E L Y M IR +E+ G + F C+G+EA + +L Sbjct: 32 GATVPDINQETALRLYHTMRFIRMLDERMQAAQRQGRIS-FYMQCLGEEAAVTASAAALD 90 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 + D ++ YRE + G + M ++ + + KG+ +H S + + Sbjct: 91 QDDMIMAQYREQAALHYRGFSLEQFMNQMFSNERDLGKGRQMPIHYGSNALNYMTISSPL 150 Query: 161 GAQVSLGTGIAFANKYRRSDK-----------ICVVCFGDGAANQGQVYESFNIAALWNL 209 G Q+ +G A+ K + D I + FG+GAA++G + N+AA+ Sbjct: 151 GTQIPQASGHAYGQKLKHIDPQTGELGSEIDNITICYFGEGAASEGDFHAGLNMAAVLKA 210 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 VI+ NN YA+ T A + RGV + I ++VDG D AV A A C Sbjct: 211 PVIFFARNNGYAISTPADEQFAGDGIASRGVGYGIKTIRVDGADALAVFAATQAARKICV 270 Query: 270 AHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 P++IE + YR HS S DP+ YR++EE + N PI + +K L+ +W E Sbjct: 271 TTGEPVLIESIAYRLGAHSTSDDPSGYRSKEEEASQQLNC-PIARFKKWLIAKEWLDEAT 329 Query: 329 LKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + + +R+ I +V+ A+ +P L SD+ Sbjct: 330 DESEKEKIRESILEAVKVAEKIAKPALESLISDV 363 >gi|108862263|gb|ABA95968.2| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor, putative, expressed [Oryza sativa Japonica Group] gi|108862264|gb|ABA95969.2| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor, putative, expressed [Oryza sativa Japonica Group] Length = 487 Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 151/325 (46%), Gaps = 2/325 (0%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 + G E +KE L Y M ++ + + G + F G+EA+ + + Sbjct: 132 ISGSRFQEVSKELALKMYNEMATLQVMDTIFFEAQRQGRIS-FYLTSHGEEAINIASAAA 190 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 LT D ++ YRE G +L G + + G + KG+ +H S + ++ Sbjct: 191 LTIDDIVLPQYREPGVLLWRGFTLQEFANQCFGNKLDYGKGRQMPIHYGSNRLNYFTVSS 250 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + Q+ G A++ K + D + FGDG ++G + + N AA+ VI+ NN Sbjct: 251 PIATQLPHAVGAAYSLKMDKKDACAITYFGDGGTSEGDFHAALNFAAVMEAPVIFFCRNN 310 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +A+ T S RG ++ + ++VDG D AV + + A PI++E Sbjct: 311 GWAISTPTSEQFRSDGAVIRGQAYGMRSIRVDGNDALAVYSAVHTAREMAIKEGRPILVE 370 Query: 279 MLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 LTYR HS SD + YR +EI R+ DPI + RK + N W + D E+ NVR Sbjct: 371 ALTYRVGHHSTSDDSTKYRPVDEIEHWRTARDPISRYRKWVQGNGWWCDEDESELRNNVR 430 Query: 338 KIINNSVEFAQSDKEPDPAELYSDI 362 + + +++ A+ +P AEL++D+ Sbjct: 431 QELLKAIQVAERMPKPPLAELFTDV 455 >gi|54022988|ref|YP_117230.1| putative branched-chain alpha-keto acid dehydrogenase component [Nocardia farcinica IFM 10152] gi|54014496|dbj|BAD55866.1| putative branched-chain alpha-keto acid dehydrogenase component [Nocardia farcinica IFM 10152] Length = 370 Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 155/312 (49%), Gaps = 27/312 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M + RR + +A L G +G + L +GQEA VG +L D + +YRE Sbjct: 43 MTVARRIDVEATALQRQGQLGLWPPL-LGQEAAQVGSARALHPDDYVFCSYREAAVAYCR 101 Query: 119 GVDASKIMAELTGRQGGISK-GKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANKY 176 GV R G +++ +G + H + G + +VGAQ TG A+A Sbjct: 102 GV-----------RPGELTRLWRGVAHHCWDPDAVGMTNPNIVVGAQGLHATGYAYAAHL 150 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 ++ + FGDGA +QG + E+F AA W+ V++ +NN +A+ V R + T Sbjct: 151 DGAEIATIAYFGDGATSQGDIAEAFGFAASWSAPVVFFCQNNHWAISAPV-RVQSATPLV 209 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANY 295 +R + +PG+QVDG D+ AV A +AVA R GP IE LTYR H+ + DP Y Sbjct: 210 RRAYGYGMPGVQVDGNDVLAVLAVTRQAVARARTGGGPSFIEALTYRMGPHTTADDPTRY 269 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNK--W--ASEGDLKE-IEMNVRKIINNSVEFAQSD 350 R E E + DPI+++R RLL + W A E ++ E + ++ ++E Sbjct: 270 RAAAETEEW-TRRDPIDRLR-RLLEREALWDAAFEREVGERADTAAAELRRATLEM---- 323 Query: 351 KEPDPAELYSDI 362 +PDPA+L+ + Sbjct: 324 PDPDPAQLFDHV 335 >gi|223043882|ref|ZP_03613924.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus capitis SK14] gi|222442786|gb|EEE48889.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus capitis SK14] Length = 370 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 13/277 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + EQ + M+ R ++++ L G +G F GQEA + + +L + D Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQYALEKED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ ++ A L R G KG + F I+GAQ Sbjct: 99 FILPGYRDVPQIIWHGLPLTE--AFLFSR--GHFKG-----NQFPEGVNALSPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+AF K R + + + GDG ++QG YE N A+ + I+VI+NN YA+ Sbjct: 150 YVQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A T +++ ++ +PG+QVDGMD AV +A A +GP +IE LTYR Sbjct: 210 TPRSKQTAATTLAQKAIAVGVPGIQVDGMDALAVYQATLEARERAVAGEGPTVIETLTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 Y H+M+ DP YRT +E E DP+ + RK L Sbjct: 270 YGPHTMAGDDPTRYRTSDEDAEW-EKKDPLVRFRKYL 305 >gi|225457857|ref|XP_002268860.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|302142724|emb|CBI19927.3| unnamed protein product [Vitis vinifera] Length = 471 Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 79/284 (27%), Positives = 138/284 (48%), Gaps = 1/284 (0%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 F +G+EA+ + +L+ D ++ YRE G +L G + + G + KG Sbjct: 156 SFYLTSVGEEAINIASAAALSPDDIVMAQYREPGVLLWRGFTLQEFANQCFGNKADCGKG 215 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + +H S K ++ + Q+ G A++ K D V FGDG+ ++G + Sbjct: 216 RQMPIHYGSKKLNYFTVSSPLATQLPQAVGAAYSLKMDNKDACVVAYFGDGSTSEGDFHA 275 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 S N AA+ VI++ NN +A+ T S +G ++ I ++VDG D AV Sbjct: 276 SLNFAAVMEAPVIFLCRNNGWAISTPTSEQFRSDGIVVKGPAYGIQSIRVDGNDALAVHN 335 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 + A + PI++E LTYR HS SD + YR +E+ +P+ + RK + Sbjct: 336 AVRAARQMAIHEQRPILVEALTYRVGHHSTSDDSTKYRPVDEVKHWEMGQNPVNRFRKWV 395 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 N W SE D ++ ++RK + +++ A+ ++P A+L+SD+ Sbjct: 396 ERNGWWSEEDESQLRSSIRKQLLQAIQVAEKMEKPPLADLFSDV 439 >gi|167564810|ref|ZP_02357726.1| pdhA [Burkholderia oklahomensis EO147] Length = 362 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/312 (28%), Positives = 153/312 (49%), Gaps = 14/312 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M+L R F+ KA L G +G F +GQEA+ VG+ ++ D + +YR+H Sbjct: 36 LPLYRAMVLTRVFDTKAVALQRTGKIGTFAS-SVGQEAIGVGVASAMRADDVLFPSYRDH 94 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GV M E GG +G F+ + +G QV G A+ Sbjct: 95 AAQFLRGV----TMTESLLYWGGDERGSD-----FAAARQDFPNCVPIGTQVCHAAGAAY 145 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A R ++ V GDG ++G YE+ N+A W ++ V+ NNQ+A+ +R +A Sbjct: 146 AFMLRGEARVAVAILGDGGTSKGDFYEAMNMAGAWRAPLVIVVNNNQWAISMPRARQTAA 205 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ I G QVDG DI AV+ + A+ R GP ++E L+YR H+ +D Sbjct: 206 QTLAQKAIAAGIEGRQVDGNDIVAVRQVVGDALERARRGGGPALVEALSYRLGDHTTADD 265 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 A YR + + + + +P+ ++R+ L+H N W D +++ + ++V+ + Sbjct: 266 ATRYRDSDAVGK-QWEFEPLLRLRQYLMHRNVWDKAQD-EQLGKACYAQVEDAVQAYLAV 323 Query: 351 KEPDPAELYSDI 362 +PD + ++ + Sbjct: 324 PQPDTSAMFDHL 335 >gi|118467989|ref|YP_888972.1| pyruvate dehydrogenase E1 component, subunit alpha [Mycobacterium smegmatis str. MC2 155] gi|118169276|gb|ABK70172.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycobacterium smegmatis str. MC2 155] Length = 370 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/264 (31%), Positives = 129/264 (48%), Gaps = 12/264 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M++ R + + L G + F C GQEA +G L + D + YRE G Sbjct: 51 YESMVVTRNLDVEFVNLQRQGELALFAS-CRGQEAAQIGAAACLRKTDWLFPQYREIGAF 109 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G+ +++ A G+ G G + + G +G H + G A A + Sbjct: 110 LLRGITPAQMGAVWRGKWHGGLSFTGKCVAPIAIPIGTHGLHAV---------GAAMAAQ 160 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 D + V GDGA ++G +E+FN+A ++ ++ I+NNQ+A+ VSR A Sbjct: 161 RLGEDSVTVAFLGDGATSEGDAHEAFNLATVFRAPCVFFIQNNQWAISVPVSRQQAGPTI 220 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + R + + +PG++VDG D+ A A M +A R +GP +IE +TYR H+ S DP Sbjct: 221 AHRAIGYGMPGIRVDGNDVLACYAVMSEAAERARRGEGPTLIEAVTYRMGPHTTSDDPTR 280 Query: 295 YRTREEINEMRSNHDPIEQVRKRL 318 YR EE+ E + DPI + R L Sbjct: 281 YRPAEEV-EAWAARDPIARYRTYL 303 >gi|222616745|gb|EEE52877.1| hypothetical protein OsJ_35450 [Oryza sativa Japonica Group] Length = 512 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 151/325 (46%), Gaps = 2/325 (0%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 + G E +KE L Y M ++ + + G + F G+EA+ + + Sbjct: 157 ISGSRFQEVSKELALKMYNEMATLQVMDTIFFEAQRQGRIS-FYLTSHGEEAINIASAAA 215 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 LT D ++ YRE G +L G + + G + KG+ +H S + ++ Sbjct: 216 LTIDDIVLPQYREPGVLLWRGFTLQEFANQCFGNKLDYGKGRQMPIHYGSNRLNYFTVSS 275 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + Q+ G A++ K + D + FGDG ++G + + N AA+ VI+ NN Sbjct: 276 PIATQLPHAVGAAYSLKMDKKDACAITYFGDGGTSEGDFHAALNFAAVMEAPVIFFCRNN 335 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +A+ T S RG ++ + ++VDG D AV + + A PI++E Sbjct: 336 GWAISTPTSEQFRSDGAVIRGQAYGMRSIRVDGNDALAVYSAVHTAREMAIKEGRPILVE 395 Query: 279 MLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 LTYR HS SD + YR +EI R+ DPI + RK + N W + D E+ NVR Sbjct: 396 ALTYRVGHHSTSDDSTKYRPVDEIEHWRTARDPISRYRKWVQGNGWWCDEDESELRNNVR 455 Query: 338 KIINNSVEFAQSDKEPDPAELYSDI 362 + + +++ A+ +P AEL++D+ Sbjct: 456 QELLKAIQVAERMPKPPLAELFTDV 480 >gi|70726860|ref|YP_253774.1| pyrubate dehydrogenase E1 component subunit alpha [Staphylococcus haemolyticus JCSC1435] gi|68447584|dbj|BAE05168.1| pyrubate dehydrogenase E1 component alpha subunit [Staphylococcus haemolyticus JCSC1435] Length = 370 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 94/294 (31%), Positives = 147/294 (50%), Gaps = 16/294 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + EQ + M+ R ++++ L G +G F GQEA + + +L + D Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQYALEKED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ ++ A L R G KG + F + I+GAQ Sbjct: 99 FILPGYRDVPQIIWHGLPLTE--AFLFSR--GHFKG-----NQFPEGVNAFSPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+AF K R + + GDG ++QG YE N A+ + I+VI+NN YA+ Sbjct: 150 YIQTAGVAFGIKKRGKKAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A T+ +++ ++ IPG+QVDGMD AV +A +GP +IE +TYR Sbjct: 210 TPRSKQTAATSLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAINGEGPTLIETMTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIE 333 Y H+M+ DP YRT +E + DP+ + RK L NK W E + + IE Sbjct: 270 YGPHTMAGDDPTRYRTSDEDADW-EKKDPLVRFRK-FLENKGLWNEEKENEVIE 321 >gi|328872006|gb|EGG20376.1| 3-methyl-2-oxobutanoate dehydrogenase [Dictyostelium fasciculatum] Length = 433 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/318 (27%), Positives = 153/318 (48%), Gaps = 3/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F+K++ Y++ML + + + G + F G+EA+ +G +L D + Sbjct: 82 FSKDEVTKMYKMMLTLNTMDNILYDVQRQGRIS-FYMTSFGEEAIHIGSAAALDLKDTVF 140 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YRE G ++ G +I+ + + + KG+ +H S + + Q+ Sbjct: 141 AQYRESGVLMWRGFSIEQIVNQCCSNEFDLGKGRQMPVHYGSKEINVQTISSPLTTQLPQ 200 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A+A K +V FG+GAA++G + + N AA I+ NN++A+ T Sbjct: 201 AVGAAYAQKLMGEKACTIVYFGEGAASEGDFHAAMNFAATLQSPTIFFCRNNKWAISTPS 260 Query: 227 SRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + RG + + I ++VDG DI AV KA P++IE +TYR Sbjct: 261 HEQYRGDGIAGRGPNGYGIATIRVDGNDIWAVYNATKKAREMAVEQGQPVLIEAMTYRVG 320 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HS SD ++ YRT EEIN + +P+ ++R+ +L W +E KE+ +VR + S+ Sbjct: 321 HHSTSDDSSRYRTLEEINFWKEKRNPMHRLRQYMLKRNWWTEDQDKEVVSSVRSQVRESL 380 Query: 345 EFAQSDKEPDPAELYSDI 362 A+ K+P +EL++D+ Sbjct: 381 MRAEKQKKPAISELFTDV 398 >gi|22773771|gb|AAN05020.1| branched-chain alpha-keto acid dehydrogenase complex subunit E1 alpha [Listeria monocytogenes] Length = 332 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 95/310 (30%), Positives = 149/310 (48%), Gaps = 8/310 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGH 114 Y ML+ RR +E+ L G + F GQE +G + + D + YR+ Sbjct: 17 YETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYALPYYRDLAV 75 Query: 115 ILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +LA G+ A IM + + S G+ H N V Q GI A Sbjct: 76 VLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLA 135 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K + G+G++NQG +E N A++ L V++VI NNQYA+ S+ A Sbjct: 136 AKMAGDEIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQYAISVPASKQYAAE 195 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-SMSDP 292 S R + + IP +VDG ++ V A +A R +GP +IE ++YR+ H S D Sbjct: 196 KLSDRAIGYGIPRERVDGTNMGEVYAAFKRAADRARNGEGPTLIETVSYRFTPHSSDDDD 255 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINNSVEFAQSD- 350 ++YR+REE+NE + DP+ + LL + +E + EIE N+ K +N + ++A+S Sbjct: 256 SSYRSREEVNEAKGK-DPLTIFQTELLEERLLKTEEKIAEIEKNIAKEVNEATDYAESAA 314 Query: 351 -KEPDPAELY 359 EP+ + LY Sbjct: 315 YAEPESSLLY 324 >gi|42560813|ref|NP_975264.1| pyruvate dehydrogenase (lipoamide), alpha chain [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|313665159|ref|YP_004047030.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycoplasma leachii PG50] gi|42492309|emb|CAE76906.1| pyruvate dehydrogenase (lipoamide), alpha chain [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301321311|gb|ADK69954.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] gi|312949669|gb|ADR24265.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycoplasma leachii PG50] Length = 370 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 156/309 (50%), Gaps = 13/309 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 L AY++M L RR + + G + F GQEA V +L + D ++ YR Sbjct: 39 LEAYKIMNLSRRQDIYQNTMQRQGRLLSFLS-STGQEACEVAYINALNKKTDHFVSGYRN 97 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 + LA G IM G + G +G + + ++G+Q S TGIA Sbjct: 98 NAGWLAMGQLVRNIMLYWIGNEAGGKAPEGVNC---------LPPNIVIGSQYSQATGIA 148 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 FA+KYR++ + V GDG +++G+ YE+ N A L + I+VIENN++A+ T+ S + Sbjct: 149 FADKYRKTGGVVVTTTGDGGSSEGETYEAMNFAKLHEVPCIFVIENNKWAISTARSEQTK 208 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 NF+ +G++ IP + VDG D A + V Y R GP+++E TYR HS SD Sbjct: 209 SINFAVKGIATGIPSIIVDGNDYLACIGVFKEVVEYARKGNGPVLVECDTYRLGAHSSSD 268 Query: 292 -PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 P YR + E EM + DP+ ++++ L+ K S+ ++E K I + + + + Sbjct: 269 NPDVYRPKGEFEEM-AKFDPLIRLKQYLIDKKLWSDEQQAQLEAEQDKFIADEFAWVEQN 327 Query: 351 KEPDPAELY 359 K D +++ Sbjct: 328 KNYDLIDIF 336 >gi|294507997|ref|YP_003572055.1| Pyruvate dehydrogenase beta subunit [Salinibacter ruber M8] gi|294344325|emb|CBH25103.1| Pyruvate dehydrogenase beta subunit [Salinibacter ruber M8] Length = 665 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/292 (28%), Positives = 146/292 (50%), Gaps = 5/292 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R +L R EEK L G + + GQEAV G +L + D ++ +R G Sbjct: 21 RALLEPRVIEEKMLTLIRQGRIAKWFS-GYGQEAVAAGTAWALDDRDYILPMHRNLGVWT 79 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 VD ++ +L G++GG + G+ + H + G + A + + G+ A ++ Sbjct: 80 TRDVDRERLFCQLMGKKGGFTNGRDRTFHFGLPEKNLVGMISHMAAMLPVACGLGQAVRF 139 Query: 177 RRSDKI-CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R +D++ C C GDG +G +E+ N+A++W+L V++++ENN Y + T A A + Sbjct: 140 READRVACAFC-GDGGTREGDFHEALNLASVWDLPVLFLVENNGYGLSTPTDEAVAPDDI 198 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + +++PGM VDG D+ AV + +A A+ R KGP+++EM T+R RGH + Y Sbjct: 199 ADAAAGYDMPGMIVDGNDVFAVIEAVREARAHART-KGPVLLEMKTFRVRGHEEASGTAY 257 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 E I E + DP+++ R+ ++ I + ++ E+A Sbjct: 258 VPDELIEEWKEK-DPLDRFAARVREEGLLGADRMESIRAELESAVDELAEWA 308 >gi|307295253|ref|ZP_07575092.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Sphingobium chlorophenolicum L-1] gi|306878756|gb|EFN09975.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Sphingobium chlorophenolicum L-1] Length = 467 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 90/314 (28%), Positives = 151/314 (48%), Gaps = 9/314 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 + M+L R F+E+ + + G F G+EA+ V M L +GD YR G ++ Sbjct: 140 KAMMLTRAFDERLFRAHRQGKTS-FYMKSTGEEAIAVAQSMVLGKGDMCFPTYRVLGWLM 198 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 A G ++ ++ KG+ + + GFY G VG++ G A A+ Y Sbjct: 199 ARGYPLIDLVNQIFSNARDPLKGRQLPILYSARDFGFYSLSGNVGSRFGHAVGWAMASAY 258 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA-QTNF 235 + DKI + G+G +G +E+ A+++ + + NNQ+A+ T A A QT F Sbjct: 259 KGDDKIALAYIGEGTTAEGDFHEALTFASVYRAPTLLCVTNNQWAISTFSGIAGAEQTTF 318 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + + +++ IPG++VDG D AV A A RA+ G +IE+ TYR GHS S DP Sbjct: 319 AAKAIAYGIPGIRVDGNDFLAVWAATQWAAERARANMGSTLIELFTYRAAGHSTSDDPTK 378 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGDL---KEIEMNVRKIINNSVEFAQSD 350 YR +E DP+E+++ L+ +W E + E++ V+ + + Sbjct: 379 YRPADEAQHWPLG-DPVERLKAHLVTLGEWDDERHVALEAELDATVKAAVKEAEAIGTLG 437 Query: 351 K-EPDPAELYSDIL 363 K +P AE++ + Sbjct: 438 KSKPGVAEMFEGVF 451 >gi|271968096|ref|YP_003342292.1| pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component type subunit alpha-like protein [Streptosporangium roseum DSM 43021] gi|270511271|gb|ACZ89549.1| Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component type alpha subunit-like protein [Streptosporangium roseum DSM 43021] Length = 330 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 127/248 (51%), Gaps = 9/248 (3%) Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 IR FE +L+ G + G H C+GQE + V +K L E D + + +R HGH LA + Sbjct: 50 IRHFELALLRLFEAGELSGTTHTCLGQEYIPVALKPLLQEDDHVFSNHRGHGHFLARHAE 109 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 ++AE+ GR+G + G GGS H++ + + G+ G + + G+A K + S Sbjct: 110 PHGLLAEIMGREGALCAGVGGSQHIYHRR---FLSTGVQGESLPVAVGVAL--KLKGSGA 164 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 + GDG +G VYE+ N+A LW + ++ V+ENN A T + A + + R + Sbjct: 165 LACAYVGDGTWGEGSVYEALNMAQLWRVPLLVVVENNGIAQSTPTA-AQMSGDIAARAAA 223 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEI 301 F++ ++ ++ ++A + + R P++ E +T+R HS D + R EEI Sbjct: 224 FDVLHHRMTSTEVDEIRAELAPLLTVVRGDSRPLVAEFVTHRLGPHSKGD--DTRPPEEI 281 Query: 302 NEMRSNHD 309 R +HD Sbjct: 282 ARAR-DHD 288 >gi|23099321|ref|NP_692787.1| branched-chain alpha-keto acid dehydrogenase E1 alpha chain [Oceanobacillus iheyensis HTE831] gi|22777550|dbj|BAC13822.1| branched-chain alpha-keto acid dehydrogenase E1 alpha chain (3-methyl-2-oxobutanoate dehydrogenase (lipoamide) ) [Oceanobacillus iheyensis HTE831] Length = 328 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/312 (30%), Positives = 146/312 (46%), Gaps = 7/312 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 L Y +MLL R+ +E+ L G + F C GQEA VG +L D + YR+ Sbjct: 14 LGMYEMMLLARKLDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALNRTTDYIAPYYRD 72 Query: 112 HGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 G +LA G+ A +M + + S G+ H KN G V Q+ G+ Sbjct: 73 LGVVLAFGMSAQDVMLSAFAKAEDPNSGGRQMPGHFGQKKNRILTGSSPVTTQLPHAVGV 132 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A K + + V G+G++NQG +E N A + L VI ++ENN+YA+ R Sbjct: 133 ALAAKMDKEPLVSFVTLGEGSSNQGDFHEGLNFAGVHKLPVITMVENNKYAISVPYDRQV 192 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A S+R S+ +PG+ VDG D AV + +A +GP +IE +TYR HS Sbjct: 193 ASETISERANSYGMPGVTVDGNDPVAVYQAVSEARDRAVRGEGPTLIEAITYRLTAHSSD 252 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ- 348 D YR + E+ E + D I L + +EI + +++N + ++A+ Sbjct: 253 DDDRAYREKNEVEEAKKK-DSIITFATTLKEAGVLKDEKEQEIMSRIDELVNEATDYAEN 311 Query: 349 -SDKEPDPAELY 359 S EP+ A Y Sbjct: 312 ASYAEPEDALRY 323 >gi|83319466|ref|YP_424212.1| pyruvate dehydrogenase complex, EI component, alpha subunit [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|1480706|gb|AAC44342.1| pyruvate dehydrogenase EI alpha subunit [Mycoplasma capricolum] gi|83283352|gb|ABC01284.1| pyruvate dehydrogenase complex, EI component, alpha subunit [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 370 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 156/309 (50%), Gaps = 13/309 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 L AY++M L RR + + G + F GQEA V +L + D ++ YR Sbjct: 39 LEAYKIMNLSRRQDIYQNTMQRQGRLLSFLS-STGQEACEVAYINALNKKTDHFVSGYRN 97 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 + LA G IM G + G +G + + ++G+Q S TGIA Sbjct: 98 NAAWLAMGQLVRNIMLYWIGNEAGGKAPEGVNC---------LPPNIVIGSQYSQATGIA 148 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 FA+KYR++ + V GDG +++G+ YE+ N A L + I+VIENN++A+ T+ S + Sbjct: 149 FADKYRKTGGVVVTTTGDGGSSEGETYEAMNFAKLHEVPCIFVIENNKWAISTARSEQTK 208 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 NF+ +G++ IP + VDG D A + V Y R GP+++E TYR HS SD Sbjct: 209 SINFAVKGIATGIPSIIVDGNDYLACIGVFKEVVEYVRKGNGPVLVECDTYRLGAHSSSD 268 Query: 292 -PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 P YR + E EM + DP+ ++++ L+ K S+ ++E K + + + + + Sbjct: 269 NPDAYRPKGEFEEM-AKFDPLIRLKQYLIDKKIWSDEQQAQLEAEQDKFVADEFAWVEKN 327 Query: 351 KEPDPAELY 359 K D +++ Sbjct: 328 KNYDLIDIF 336 >gi|167571980|ref|ZP_02364854.1| pdhA [Burkholderia oklahomensis C6786] Length = 362 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/312 (28%), Positives = 152/312 (48%), Gaps = 14/312 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M+L R F+ KA L G +G F +GQEA+ VG+ ++ D + +YR+H Sbjct: 36 LPLYRAMVLTRAFDTKAVALQRTGKIGTFAS-SVGQEAIGVGVASAMRADDVLFPSYRDH 94 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GV M E GG +G F+ + +G QV G A+ Sbjct: 95 AAQFLRGV----TMTESLLYWGGDERGSD-----FAAARQDFPNCVPIGTQVCHAAGAAY 145 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A R ++ V GDG ++G YE+ N+A W ++ V+ NNQ+A+ +R +A Sbjct: 146 AFMLRGEARVAVAILGDGGTSKGDFYEAMNMAGAWRAPLVIVVNNNQWAISMPRARQTAA 205 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ I G QVDG DI AV + A+ R GP ++E L+YR H+ +D Sbjct: 206 QTLAQKAIAAGIEGRQVDGNDIVAVHQVVGDALERARRGGGPALVEALSYRLGDHTTADD 265 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 A YR + + + + +P+ ++R+ L+H N W D +++ + ++V+ + Sbjct: 266 ATRYRDSDAVGK-QWEFEPLLRLRQYLMHRNVWDKAQD-EQLGKACYAQVEDAVQAYLAV 323 Query: 351 KEPDPAELYSDI 362 +PD + ++ + Sbjct: 324 PQPDTSAMFDHL 335 >gi|84495444|ref|ZP_00994563.1| pyruvate dehydrogenase (lipoamide) [Janibacter sp. HTCC2649] gi|84384937|gb|EAQ00817.1| pyruvate dehydrogenase (lipoamide) [Janibacter sp. HTCC2649] Length = 364 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/314 (30%), Positives = 147/314 (46%), Gaps = 22/314 (7%) Query: 36 IPFLEGFEVSEFNKEQELSA-YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG 94 IP E E+ + +L YR ++L+RRF+ +A L G +G + L +GQEA +G Sbjct: 12 IPHAEYDEIVDALSHDDLRGLYRDLVLVRRFDLEATSLQRQGELGLWASL-LGQEAAQIG 70 Query: 95 MKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 ++ + D YREHG A G+D +++A G + KG GF+ Sbjct: 71 AGRAMRKQDHAFPGYREHGLAWARGLDPMRLIAMYRG----VDKGAWDPAEF-----GFH 121 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRS--------DKICVVCFGDGAANQGQVYESFNIAAL 206 ++G Q LGTG A + + D + C GDGA QG E+F A + Sbjct: 122 SYTIVIGNQSLLGTGYAMGIQRDGAVGTGDDARDAAVIACMGDGATAQGDNNEAFVFAGV 181 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 +N V++ +NNQ+A+ +R + + KR F PG++VDG D+ A A + Sbjct: 182 YNSPVVFFCQNNQWAISEPNARQT-RAPIYKRADGFGFPGIRVDGNDVLASYAVTTAMLD 240 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 R+ GP +IE TYR H+ S DP YR E+ E+ DPI + ++ L H A Sbjct: 241 RARSGDGPSLIEAFTYRMAAHTTSDDPTKYRISAEV-EIWKLRDPIARYKRWLAHEGIAD 299 Query: 326 EGDLKEIEMNVRKI 339 IE ++ Sbjct: 300 AEFFDAIEQEADEL 313 >gi|149372845|ref|ZP_01891866.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [unidentified eubacterium SCB49] gi|149354542|gb|EDM43107.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [unidentified eubacterium SCB49] Length = 667 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 85/321 (26%), Positives = 154/321 (47%), Gaps = 10/321 (3%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 ++ S+ + + Y+ ML R EEK L G + + IGQEA+ VG+ L + Sbjct: 13 YDRSDLTDQTLIHLYKSMLKPRMIEEKMLILLRQGKISKWFS-GIGQEAISVGVTAVLDK 71 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 + ++ +R G + ++ ++ G+ G +KG+ S H + + G +G Sbjct: 72 EEYILPMHRNLGVFTTREIPLYRLFSQWQGKASGFTKGRDRSFHFGTQEFNIVGMISHLG 131 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q + GIA N ++++++C V G+G ++G ++E+ N+A++WNL V++ IENN Y Sbjct: 132 PQFGVADGIALGNLLKKNNQVCAVFTGEGGTSEGDIHEALNVASVWNLPVLFCIENNGYG 191 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T N + RG + + ++G +I V + + V R + P+++E T Sbjct: 192 LSTPTKEQYNCENLADRGKGYGMESHIIEGNNILEVYTKVKELVVDMRKNPRPVLLEFKT 251 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASE-------GDLK-EIE 333 +R RGH + Y E++ + S DP+ LL SE GD+K EI+ Sbjct: 252 FRMRGHEEASGTKY-VPEQLMDTWSEKDPLLNFENYLLKQGLISETLIEQWKGDIKIEID 310 Query: 334 MNVRKIINNSVEFAQSDKEPD 354 N+ N ++ + KE D Sbjct: 311 ANLDLAFNENLIESTETKELD 331 >gi|90961135|ref|YP_535051.1| pyruvate dehydrogenase E1 component alpha subunit [Lactobacillus salivarius UCC118] gi|227892431|ref|ZP_04010236.1| pyruvate dehydrogenase E1 component alpha subunit [Lactobacillus salivarius ATCC 11741] gi|301300184|ref|ZP_07206398.1| pyruvate dehydrogenase E1 component, alpha subunit [Lactobacillus salivarius ACS-116-V-Col5a] gi|90820329|gb|ABD98968.1| Pyruvate dehydrogenase E1 component alpha subunit [Lactobacillus salivarius UCC118] gi|227865724|gb|EEJ73145.1| pyruvate dehydrogenase E1 component alpha subunit [Lactobacillus salivarius ATCC 11741] gi|300214062|gb|ADJ78478.1| Pyruvate dehydrogenase E1 component alpha subunit [Lactobacillus salivarius CECT 5713] gi|300852201|gb|EFK79871.1| pyruvate dehydrogenase E1 component, alpha subunit [Lactobacillus salivarius ACS-116-V-Col5a] Length = 365 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 90/322 (27%), Positives = 151/322 (46%), Gaps = 13/322 (4%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + + EQ + ++ M+ R E++ +L G +G F G+EA +G + ++ + D Sbjct: 36 PDLSDEQIVELFKKMVWSRVLNERSTKLNRQGRLGFFAPTA-GEEASQIGSEFAMEKEDY 94 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 ++ AYR+ ++ G+ K G G + + I+GAQ Sbjct: 95 ILPAYRDVPQLVLHGLPLYKAFLWSRGHVDG---------NKYPENFNALPPQIIIGAQY 145 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 GIA K + S + GDG +QG YE N A + I+V++NN YA+ Sbjct: 146 VQAAGIALGLKKKGSKNVAYTYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNGYAISV 205 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++ +A +++GV+ IP +QVDGMD A+ + M A Y A GP++IE LTYR+ Sbjct: 206 PRAKQTAAKTLAQKGVAAGIPFVQVDGMDALAMYSVMKAAREYAAAGNGPVLIETLTYRF 265 Query: 285 RGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H++S DP YRT EE E + DP+ ++R L SE K V K I+ Sbjct: 266 GPHTLSGDDPKRYRTAEEEQEWKE-KDPLIRMRTYLDKKGLWSEEKEKAWTEEVNKEIDE 324 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 ++ + + +E ++ + Sbjct: 325 AMVLTEKAPKQKVSEYLKNVFV 346 >gi|226311956|ref|YP_002771850.1| 2-oxoisovalerate dehydrogenase alpha subunit [Brevibacillus brevis NBRC 100599] gi|226094904|dbj|BAH43346.1| 2-oxoisovalerate dehydrogenase alpha subunit [Brevibacillus brevis NBRC 100599] Length = 330 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 94/308 (30%), Positives = 144/308 (46%), Gaps = 5/308 (1%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAY 109 Q L Y MLL R+ +E+ L G V F C GQEA VG ++ + D + Y Sbjct: 15 QVLDMYYYMLLARKIDERQWLLNRAGKVP-FVISCQGQEAAQVGAAFAMEKDRDFLCPYY 73 Query: 110 REHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 R+ G +L G A M + + S G+ H K G V QV Sbjct: 74 RDLGLVLVFGQTARDCMLSAFAKAEDPNSGGRQMPGHFGGKKYNILTGSSPVTTQVPHAV 133 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A A + ++ D + FG+G++NQG +E N A + L VI+ ENN+YA+ + + Sbjct: 134 GMALAGRMKQEDFVVYASFGEGSSNQGDFHEGANFAGVHKLPVIFFCENNKYAISVPLKK 193 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 A + + R + + PG+ VDG D V M +AV R+ +GP +IE + YR HS Sbjct: 194 QLACESVADRAIGYGFPGVSVDGNDPIEVYRVMKEAVERARSGQGPTLIEAVMYRLVPHS 253 Query: 289 MSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 D YRTREE+ E + DP+ + L E ++ V+ ++ + E+A Sbjct: 254 SDDDDRVYRTREEVEEAKKK-DPLIVFAEYLREIGLLDEHKEADMLARVQLEVDEATEYA 312 Query: 348 QSDKEPDP 355 ++ P P Sbjct: 313 ENAPYPTP 320 >gi|307204873|gb|EFN83428.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial [Harpegnathos saltator] Length = 338 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/281 (32%), Positives = 145/281 (51%), Gaps = 10/281 (3%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EAV +G +LT D + YRE G +L G K M + G KG+ +H Sbjct: 28 GEEAVQIGSAAALTLDDLIYAQYREAGVLLHRGYPLLKFMNQCYGNCEDDGKGRQMPVHY 87 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAA 205 S + F + Q+ G A+A K + K CV C FGDGAA++G + +FN AA Sbjct: 88 GSKECNFMTISSPLTTQLPQAAGAAYAFKLTKK-KACVACYFGDGAASEGDAHAAFNFAA 146 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + +I++ NN YA+ TSV + +G ++ I ++VDG D+ AV M A Sbjct: 147 TLSSPIIFLCRNNGYAISTSVEEQFKSDGIAAKGPAYGINTIRVDGNDVLAVYFAMRTAR 206 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLH-NKW 323 +C HK P++IE +TYR HS SD + YR+ +EI + + H P+ + R L W Sbjct: 207 NFCIEHKKPVLIEAMTYRLGHHSTSDDSTAYRSADEIAKWNT-HTPLFKFRAYLESLGLW 265 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AELYSDI 362 + + D + I ++++ FA+++K+ P EL++D+ Sbjct: 266 SQKKDEELINSTKKEVLR---VFAEAEKKLKPHWKELFTDV 303 >gi|153004855|ref|YP_001379180.1| 3-methyl-2-oxobutanoate dehydrogenase [Anaeromyxobacter sp. Fw109-5] gi|152028428|gb|ABS26196.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Anaeromyxobacter sp. Fw109-5] Length = 399 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 4/312 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YRLM+L R +E+ L G +G F IG+EA I+G ++ E D + YREH Sbjct: 57 LRLYRLMVLNRSLDERMITLQRQGRIG-FYIGSIGEEATILGSAAAMAESDWIFPCYREH 115 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G L G+ + +L G G KG+ H F + Q+S G A+ Sbjct: 116 GAALMRGMPLVTFLCDLFGNAGDAMKGRQMPCHEAWRPGRFTSISSPISTQISHAVGAAW 175 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + + + + FG+G + + N AA+ + V++V NN +A+ R + Sbjct: 176 AARLKGDAMVALTYFGEGGTSAHDFHTGLNFAAVRKIPVVFVCRNNGWAISVPRERQTGS 235 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-D 291 +++ +++ + G +VDG D+ AV A +A A +GP ++E +TYR GHS S D Sbjct: 236 ETIAQKAIAYGMRGERVDGNDLLAVHAATRRARERAEAGEGPTLLECVTYRVEGHSTSDD 295 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 P YR E+ E DPI ++R+ L+ +E + + I VR+ + ++ A++ Sbjct: 296 PRAYRP-AELVEPWKKRDPILRMRRYLVRRGALAEAEDERIRAQVREELQRVLKEAEAFA 354 Query: 352 EPDPAE-LYSDI 362 P E L+ D+ Sbjct: 355 PKPPLESLFEDV 366 >gi|159037836|ref|YP_001537089.1| pyruvate dehydrogenase (acetyl-transferring) [Salinispora arenicola CNS-205] gi|157916671|gb|ABV98098.1| Pyruvate dehydrogenase (acetyl-transferring) [Salinispora arenicola CNS-205] Length = 382 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 83/289 (28%), Positives = 144/289 (49%), Gaps = 12/289 (4%) Query: 31 VDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEA 90 +D P + E E + YR M++ RRF+++A L G + + GQEA Sbjct: 34 LDPAGTPLPAHPDYPEPPVEALVELYRRMVIGRRFDQQATALTKQGRLAVYPS-ARGQEA 92 Query: 91 VIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK 150 VG ++L + D + YRE + A G+D +++ L +G G + + + Sbjct: 93 CQVGAVLALRDDDWVFPTYRESMALTARGIDPVEVLTLL---RGDWHCGYDPVLRRSAPQ 149 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 + Q G+A+ Y+ + + + GDGA ++G +E N AA++ Sbjct: 150 CT------PLATQCVHAAGLAYGEAYQGRETVALTFIGDGATSEGDFHEGVNFAAVFKAP 203 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 V+Y ++NN+YA+ +SR +A + + +GV + +P QVDG D AV A + +AVA+ RA Sbjct: 204 VVYFVQNNRYAISVPLSRQTAAPSLAYKGVGYGVPSEQVDGNDPVAVLAVLTRAVAHARA 263 Query: 271 HKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 GP ++E TYR H+ +D A YR +E+ + + DP+ ++ L Sbjct: 264 GHGPFLVEAHTYRMEPHTNADDATRYRDADEVA-VWQDRDPVARLETYL 311 >gi|227514899|ref|ZP_03944948.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus fermentum ATCC 14931] gi|260663018|ref|ZP_05863911.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Lactobacillus fermentum 28-3-CHN] gi|227086746|gb|EEI22058.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus fermentum ATCC 14931] gi|260552639|gb|EEX25639.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Lactobacillus fermentum 28-3-CHN] Length = 363 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 92/322 (28%), Positives = 152/322 (47%), Gaps = 17/322 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + +Q + ++ M+ R ++ +L G +G F G+EA +G ++T+ D Sbjct: 33 MPDLTDDQLVDLFKQMIWSRLVGDQTAKLSRQGRLGFFAPTA-GEEASQMGSNFAMTKDD 91 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ AYR+ ++ G+ +K SKG + N I+GAQ Sbjct: 92 FLLGAYRDVPQLIKHGLSLAKGFM--------WSKGHYNANDYPEELNAL-PPQIIIGAQ 142 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K K+ GDG +QG YE N A + ++ ++NN YA+ Sbjct: 143 YAQTAGVALGIKLNGDKKVAYTYTGDGGTSQGDFYEGINFAGAYQAPAVFFVQNNGYAIS 202 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 +A +++GV+ IP + VDGMD AV A +A Y GP+IIE LTYR Sbjct: 203 VPRKLQTAAPTLAQKGVAAGIPSIVVDGMDALAVYAAAKQARDYAVEGNGPVIIETLTYR 262 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 Y H++S DP YRT+EE +E + DP+ ++RK L + + V K I+ Sbjct: 263 YGPHTLSGDDPTRYRTKEEEDEWHAK-DPLVRMRKFLTDKGLWDDAKEEAYNAEVAKEID 321 Query: 342 NSVEFAQSDKEPDPAELYSDIL 363 ++++ +S PA+ SD L Sbjct: 322 DAIKEVES----QPAQKASDFL 339 >gi|304310568|ref|YP_003810166.1| Probable pyruvate dehydrogenase E1 component, alpha subunit [gamma proteobacterium HdN1] gi|301796301|emb|CBL44509.1| Probable pyruvate dehydrogenase E1 component, alpha subunit [gamma proteobacterium HdN1] Length = 364 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 150/299 (50%), Gaps = 15/299 (5%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 ++ L AYR M+LIR+F++KA L G +G + +GQEA+ + +S+ + D Y Sbjct: 32 DELLRAYRNMVLIRQFDKKAVALQRTGQLGTYAS-SLGQEAISTAIGLSMRDQDVFAPYY 90 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+ GV K++A G + G G+ S + + + Q+S G Sbjct: 91 RDTAAQYLRGVPLHKLLAYWGGDETGNHFGEFASQDLPNCVP--------IATQLSHAAG 142 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 IA A K R + VV GDGA ++G YES N+A +W L ++ V+ NNQ+A+ Sbjct: 143 IATAVKIRAEKRAVVVTCGDGATSRGDFYESINLAGVWQLPLVVVVNNNQWAISVPRHLQ 202 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV--AYCRAHKGPIIIEMLTYRYRGH 287 +A + + + IP +VDG D A+ M A+ AYC KG +IE ++YR H Sbjct: 203 TAAPTIAHKAYAAGIPCQRVDGNDAAAMLEVMHAALERAYCG--KGATLIEAISYRLCDH 260 Query: 288 SMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + +D A YR+ +E+N N +PI++++ L N +E K + II+ V+ Sbjct: 261 TTADDATRYRSSDELNHAWEN-EPIKRLQTWLHQNGHWNEEKEKALFAECASIIDAEVD 318 >gi|302864657|ref|YP_003833294.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Micromonospora aurantiaca ATCC 27029] gi|302567516|gb|ADL43718.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Micromonospora aurantiaca ATCC 27029] Length = 392 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 97/324 (29%), Positives = 154/324 (47%), Gaps = 20/324 (6%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +F E+ YR ++L+R+ + +A L G +G + L +GQEA VG +L D Sbjct: 55 DFTDEEYRGLYRDLVLVRKLDAEATALQRQGELGLWASL-LGQEAAQVGSGRALRTQDMA 113 Query: 106 ITAYREHGHILACGVDASKIMAELTG-RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 YREHG + G+D + G QGG + +M++ ++GAQ Sbjct: 114 FPTYREHGVLYCRGIDPIMPLGLFRGVDQGGWDPNEF-KFNMYTI---------VIGAQT 163 Query: 165 SLGTG----IAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG +A K D V+ FGDGA +QG V ESF A+++N +++ +NNQ Sbjct: 164 LHATGYAMGVAMDGKTGGEDGEAVIAYFGDGATSQGDVNESFVWASVFNAPLVFFCQNNQ 223 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ + R + + +R F PG++VDG D+ A A A+ R +GP +IE Sbjct: 224 YAISEPLERQT-RVPLYRRAGGFGFPGVRVDGNDVLASYAVTRHALDNARNGQGPSLIEA 282 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYR H+ S DP YR E+ ++ DPI +++ L K A E E++ R Sbjct: 283 YTYRMGAHTTSDDPTRYRIASEVEAWQAK-DPIARMKAFLTKQKIADESFFTEVDEQART 341 Query: 339 IINNSVEFAQSDKEPDPAELYSDI 362 + E + +P P ++ + Sbjct: 342 ESVHLRERVLAMPDPQPVTMFDHV 365 >gi|319892091|ref|YP_004148966.1| Pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus pseudintermedius HKU10-03] gi|317161787|gb|ADV05330.1| Pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus pseudintermedius HKU10-03] gi|323464800|gb|ADX76953.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus pseudintermedius ED99] Length = 370 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 89/294 (30%), Positives = 144/294 (48%), Gaps = 16/294 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + EQ + R M+ R ++++ L G +G F GQEA + + +L + D Sbjct: 40 LPDLSDEQLVELMRRMVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQFALEQED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ +K S+G M N I+GAQ Sbjct: 99 FILPGYRDVPQLIWHGLPLTKAFL--------FSRGHFVGNQMPEGVNAL-SPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K R + + GDG ++QG YE N A+ + + I+VI+NN YA+ Sbjct: 150 YIQTAGVALGLKKRGKKAVAITYTGDGGSSQGDFYEGINFASAYKVPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + +A +++ ++ IPG+QVDGMD AV +A +GP +IE +TYR Sbjct: 210 TPRDKQTAAQTLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAINGEGPTLIETMTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIE 333 Y H+M+ DP YRT +E +E DP+ + RK L NK W+ E + + IE Sbjct: 270 YGPHTMAGDDPTKYRTSDEDSEW-EKKDPLVRFRK-FLENKGLWSEEKENEVIE 321 >gi|297171452|gb|ADI22453.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [uncultured gamma proteobacterium HF0500_05P21] Length = 654 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 89/286 (31%), Positives = 149/286 (52%), Gaps = 12/286 (4%) Query: 60 LLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACG 119 +LIR E L+ G++ G H C+GQE V + L D + + +R HGH ++ Sbjct: 23 ILIRCVENTFLDLFSEGLMNGTVHTCVGQEFSAVAVCSDLNCNDWVTSNHRCHGHYISKT 82 Query: 120 VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 D + ++ EL G + G+ KG G S H++ KNGF +G G+ + + +GI + K Sbjct: 83 KDWTGLIDELMGLESGVCKGIGSSQHLY--KNGFL-SNGPQGSLLPVASGIGYFLKKSNQ 139 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 + I + G+G +G +YES N++++ + ++V+ENN Y+ T+ + A R Sbjct: 140 NNIVISFVGEGTLGEGVLYESLNLSSILDSPHLFVLENNLYSQSTNQAEA-ISGEIIDRP 198 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 +FNI + + D+ + T+ +A + R +K P+ +++ TYR HS SD + R + Sbjct: 199 KAFNIQTFETNTWDLEHLFNTVKEAKDFVRKNKKPVFLKINTYRLNAHSKSD--DDRDAD 256 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 EIN DP+ K L K + +L +IE N+RK I NS E Sbjct: 257 EINFFLKK-DPL----KNFLDLKRWEDFNL-QIENNIRKHIENSDE 296 >gi|326804337|ref|YP_004322155.1| 2-oxoisovalerate dehydrogenase subunit alpha [Aerococcus urinae ACS-120-V-Col10a] gi|326651724|gb|AEA01907.1| 2-oxoisovalerate dehydrogenase subunit alpha [Aerococcus urinae ACS-120-V-Col10a] Length = 328 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 87/327 (26%), Positives = 155/327 (47%), Gaps = 5/327 (1%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 +E + +KE + AY+ ++ R +E+ QL +G F G E +V M ++ Sbjct: 1 MEKLASTGLSKEAIIEAYKHVVRSRLLDERIWQLTRIGKTS-FNISGQGHEVGLVAMALA 59 Query: 99 LT-EGDQMITAYREHGHILACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGG 156 + D + YR+ + G+ + ++ G+ S G+ H S ++ Sbjct: 60 FDHDKDFFLPYYRDMTACMVWGMSCTDVLLATFGKDADPNSHGRQMPNHFGSKEHNIVSH 119 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 V Q + G+A ANK SD I + G+G+ NQG+ E+ NI+ + L VI+V+E Sbjct: 120 SSPVSTQYPVAAGVALANKLDGSDSIALTTTGEGSFNQGECAEAMNISGVMQLPVIFVVE 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN YA+ + + RG + G +VDG D KAV R GP + Sbjct: 180 NNGYAISVPAKHQYHAESLALRGPGYGFEGERVDGFDFAQTFKAFKKAVEKVRQGGGPHL 239 Query: 277 IEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 IE++ R HS D YR+ EE+ +++N DPI+Q + +L+ + +E + ++I Sbjct: 240 IELMVTRLTSHSSDDDQTVYRSAEELEGVKAN-DPIKQFKTQLIEEGYLTEAENEKIYQE 298 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 ++ ++ + + A++ +P P LY + Sbjct: 299 LQAEVDQATDEAEASPDPTPESLYEQV 325 >gi|289434653|ref|YP_003464525.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170897|emb|CBH27439.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313633352|gb|EFS00197.1| 2-oxoisovalerate dehydrogenase subunit alpha [Listeria seeligeri FSL N1-067] Length = 331 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 92/318 (28%), Positives = 152/318 (47%), Gaps = 7/318 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 +++ L Y ML+ RR +E+ L G + F GQE +G + + D Sbjct: 8 LTEDKLLKMYETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYC 66 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR+ +LA G+ A IM + + S G+ H N V Q Sbjct: 67 LPYYRDLAVVLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQF 126 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 GI A K G+G++NQG +E N A++ L V++VI NN+YA+ Sbjct: 127 PHAAGIGLAAKMANDPVAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNKYAISV 186 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S+ A S R + + IPG +VDG ++ V A +A R +GP +IE ++YR+ Sbjct: 187 PASKQYAAEKLSDRAIGYGIPGERVDGTNMGEVYAAFKRAADRARNGEGPTLIETVSYRF 246 Query: 285 RGH-SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 H S D ++YR++ E+ E + DP++ K L+ + +E + EIE N+ K +N + Sbjct: 247 TPHSSDDDDSSYRSKAEVAEAKEK-DPLKIFEKELVDEGYLTEEKIAEIEKNIAKEVNEA 305 Query: 344 VEFAQSD--KEPDPAELY 359 ++A++ EP+ + LY Sbjct: 306 TDYAENAAYAEPESSLLY 323 >gi|548408|sp|P35485|ODPA_ACHLA RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|141808|gb|AAA21907.1| pyruvate dehydrogenase E1-alpha subunit [Acholeplasma laidlawii] Length = 345 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 97/303 (32%), Positives = 157/303 (51%), Gaps = 13/303 (4%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE L Y+ +L R + KA Q G + + +GQEA +GM ++ D Sbjct: 17 KETLLKMYKTAVLGRNADIKALQYQRQGRMLTYAP-NMGQEAAQIGMAAAMEPQDWNSPM 75 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YRE +L G + G + G K +G + + T + I+G+Q ++ Sbjct: 76 YRELNTLLYRGDKLENVFLYWYGNERGSIKPEG--VKILPT-------NIIIGSQSNIAA 126 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A A+K R+++++ GDG G+ YE N AA + V+ VI+NNQ+A+ T V + Sbjct: 127 GLAMASKIRKTNEVTAFTIGDGGTAHGEFYEGLNFAASFKAPVVAVIQNNQWAISTPVRK 186 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 AS +++GV+F IP +QVDG D+ A+ +A+ R GP +IE TYR H+ Sbjct: 187 ASNSETLAQKGVAFGIPYIQVDGNDMLAMYVASKEAMDRARKGDGPTLIEAFTYRMGPHT 246 Query: 289 MS-DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 S DP + YRT+EE NE + D I + + L++ + SE + K++E V IN++ + Sbjct: 247 TSDDPCSIYRTKEEENEW-AKKDQIARFKTYLINKGYWSEEEDKKLEEEVLAEINDTFKK 305 Query: 347 AQS 349 +S Sbjct: 306 VES 308 >gi|331005694|ref|ZP_08329058.1| Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [gamma proteobacterium IMCC1989] gi|330420486|gb|EGG94788.1| Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [gamma proteobacterium IMCC1989] Length = 417 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 89/293 (30%), Positives = 150/293 (51%), Gaps = 14/293 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 ++ + M+ R ++++ + G F G+EA+ V M L +GD YR+ Sbjct: 77 ITGLKAMVKTRAYDDRMMLIQRQGKTSFFMK-STGEEAISVAQAMVLKQGDMFFPTYRQA 135 Query: 113 GHILA------CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVS 165 G ++ G +M ++ G KG+ + M+S+K+ GF+ G +G Q + Sbjct: 136 GLLITNEMIRGTGWSTFDMMCQVLSNSGDKLKGRQLPI-MYSSKDAGFFSISGNLGTQYT 194 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A A+ ++ KI GDG+ + + + A+++N VI + NNQ+A+ + Sbjct: 195 QAVGWAMASAIKKDSKIASTFIGDGSTAESDFHAALTFASVYNPPVILNVTNNQWAISSF 254 Query: 226 VSRAS-AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 A+ +T F+ RGV + IP ++VDG D AV A + A R + GP IIE +TYR Sbjct: 255 QGIANNPETTFAARGVGYGIPSLRVDGNDFLAVYAASEWAADRARNNFGPTIIEWVTYRS 314 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLH-NKWASEG-DLKEIEM 334 GHS S DP+ YR ++E + DPI+++R+ L++ +W+ E D E EM Sbjct: 315 SGHSSSDDPSKYRPKDE-EKAWPLGDPIDRLREHLIYLGEWSQEQHDALEKEM 366 >gi|313638030|gb|EFS03311.1| 2-oxoisovalerate dehydrogenase subunit alpha [Listeria seeligeri FSL S4-171] Length = 331 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 92/318 (28%), Positives = 152/318 (47%), Gaps = 7/318 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 +++ L Y ML+ RR +E+ L G + F GQE +G + + D Sbjct: 8 LTEDKLLKMYETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYC 66 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR+ +LA G+ A IM + + S G+ H N V Q Sbjct: 67 LPYYRDLAVVLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQF 126 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 GI A K G+G++NQG +E N A++ L V++VI NN+YA+ Sbjct: 127 PHAAGIGLAAKMANDPVAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNKYAISV 186 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S+ A S R + + IPG +VDG ++ V A +A R +GP +IE ++YR+ Sbjct: 187 PASKQYAAEKLSDRAIGYGIPGERVDGTNMGEVYAAFKRAADRARNGEGPTLIETVSYRF 246 Query: 285 RGH-SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 H S D ++YR++ E+ E + DP++ K L+ + ++ + EIE N+ K +N + Sbjct: 247 TPHSSDDDDSSYRSKAEVAEAKEK-DPLKIFEKELVDEGYLTKEKIAEIEKNIAKEVNEA 305 Query: 344 VEFAQSD--KEPDPAELY 359 ++A+S EP+ + LY Sbjct: 306 TDYAESAAYAEPESSLLY 323 >gi|308180960|ref|YP_003925088.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046451|gb|ADN98994.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Lactobacillus plantarum subsp. plantarum ST-III] Length = 370 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 94/313 (30%), Positives = 149/313 (47%), Gaps = 16/313 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 VS+++ EQ + ++LML R +++ L G +G F GQEA +G ++ + D Sbjct: 39 VSKYSNEQLVEFFKLMLWERTLHQRSNALTRQGRLG-FYAPTEGQEASEMGSNAAMKKTD 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ AYR+ ++ G+ K A L R + H + I+GAQ Sbjct: 98 VLMPAYRDIPQLIQHGLPVYK--AFLWSRGHVLGNEYPEDFHAMPPQI-------IIGAQ 148 Query: 164 VSLGTGIAFA-NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 G+A K DK+ GDG +QG YE N A + +++++NN YA+ Sbjct: 149 YVQAAGVALGIKKNGTEDKVAYTYTGDGGTSQGDFYEGMNFAGAFEAPAVFIVQNNGYAI 208 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +A +++ V+ IP +QVDGMD AV A Y A GP++IE LTY Sbjct: 209 SVPRRKQTAAKTLAQKAVAAGIPSVQVDGMDFLAVYEVTKAAREYAAAGNGPVMIETLTY 268 Query: 283 RYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 R+ H+ + DP YRT++E N DP+ + RK L SE E V++ I Sbjct: 269 RFGPHTNAGDDPKRYRTKDEEQPWFDN-DPLIRYRKYLTDQGVWSEDQENEYVEQVKEDI 327 Query: 341 NNSVEFAQSDKEP 353 +V+ Q+D+ P Sbjct: 328 KAAVK--QADEAP 338 >gi|28378767|ref|NP_785659.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Lactobacillus plantarum WCFS1] gi|28271604|emb|CAD64510.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Lactobacillus plantarum WCFS1] Length = 370 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 94/313 (30%), Positives = 149/313 (47%), Gaps = 16/313 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 VS+++ EQ + ++LML R +++ L G +G F GQEA +G ++ + D Sbjct: 39 VSKYSNEQLVEFFKLMLWERTLHQRSNALTRQGRLG-FYAPTEGQEASEMGSNAAMKKTD 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ AYR+ ++ G+ K A L R + H + I+GAQ Sbjct: 98 VLMPAYRDIPQLIQHGLPVYK--AFLWSRGHVLGNEYPEDFHAMPPQI-------IIGAQ 148 Query: 164 VSLGTGIAFA-NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 G+A K DK+ GDG +QG YE N A + +++++NN YA+ Sbjct: 149 YVQAAGVALGIKKNGTEDKVAYTYTGDGGTSQGDFYEGMNFAGAFEAPAVFIVQNNGYAI 208 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +A +++ V+ IP +QVDGMD AV A Y A GP++IE LTY Sbjct: 209 SVPRRKQTAAKTLAQKAVAAGIPSVQVDGMDFLAVYEVTKAAREYAAAGNGPVMIETLTY 268 Query: 283 RYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 R+ H+ + DP YRT++E N DP+ + RK L SE E V++ I Sbjct: 269 RFGPHTNAGDDPKRYRTKDEEQPWFDN-DPLIRYRKYLTDQGVWSEDQENEYVEQVKEDI 327 Query: 341 NNSVEFAQSDKEP 353 +V+ Q+D+ P Sbjct: 328 KAAVK--QADEAP 338 >gi|159035782|ref|YP_001535035.1| pyruvate dehydrogenase (acetyl-transferring) [Salinispora arenicola CNS-205] gi|157914617|gb|ABV96044.1| Pyruvate dehydrogenase (acetyl-transferring) [Salinispora arenicola CNS-205] Length = 391 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 95/324 (29%), Positives = 154/324 (47%), Gaps = 20/324 (6%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +F E+ YR ++L+R+ + +A L G +G + L +GQEA VG +L D Sbjct: 54 DFTDEEYRGFYRDLVLVRKLDAEATALQRQGELGLWASL-LGQEAAQVGSGRALRTQDMA 112 Query: 106 ITAYREHGHILACGVDASKIMAELTG-RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 YREHG + G+D + G QGG + +M++ ++GAQ Sbjct: 113 FPTYREHGVLYCRGIDPIMPLGLFRGVDQGGWDPNEF-KFNMYTI---------VIGAQA 162 Query: 165 SLGTGIAFA----NKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG A K + V+ FGDGA +QG V ESF A+++N +++ +NNQ Sbjct: 163 LHATGYAMGVTMDGKTGTDEGEAVIAYFGDGATSQGDVNESFVWASVFNAPMVFFCQNNQ 222 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ + R + + +R F PG++VDG D+ A A A+ R +GP +IE Sbjct: 223 YAISEPLERQT-RIPLYRRAAGFGFPGLRVDGNDVLATYAVTRHALDNARHGQGPSLIEA 281 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYR H+ S DP YR E+ ++ DPI +++ L K A +G E++ ++ Sbjct: 282 YTYRMGAHTTSDDPTRYRIASEVEAWQAK-DPIARMKTFLQKQKIADDGFFTEVDEQAKR 340 Query: 339 IINNSVEFAQSDKEPDPAELYSDI 362 + E P+P ++ + Sbjct: 341 ESVHLRERVLEMPNPEPGSMFDHV 364 >gi|325964391|ref|YP_004242297.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component subunit alpha [Arthrobacter phenanthrenivorans Sphe3] gi|323470478|gb|ADX74163.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Arthrobacter phenanthrenivorans Sphe3] Length = 414 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/331 (27%), Positives = 153/331 (46%), Gaps = 26/331 (7%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G E + E+ L+AY +++ RR ++ L G + + GQEA V + L+ Sbjct: 69 GHEYPLPSDEELLAAYEQLVVGRRVNDQNSALVRQGRMAVYPS-SHGQEACQVAAALCLS 127 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 GD M YR+ ++ GVD ++M G G GF V Sbjct: 128 GGDWMFPTYRDAVAVMTRGVDPVQVMTIFRGDWHG----------------GFDPLQHKV 171 Query: 161 GAQVSLGT-------GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 G Q + T G+A A K R D + + GDGA ++G +E+ N AA+++L VI+ Sbjct: 172 GIQCTPLTTQLLHAVGVAHAAKLRGEDTVVLAMCGDGATSEGDFHEALNFAAVFHLPVIF 231 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 ++NN+YA+ ++ S + + + V + + G +VDG D+ A+ A +D+AV R G Sbjct: 232 FVQNNKYAISVPLAHQSVAPSLAHKAVGYGMAGERVDGNDVVALLAVLDRAVKLTREGSG 291 Query: 274 PIIIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P+++E TYR + H+ D YR E+ E R+ DP+ ++R L + I Sbjct: 292 PLLVEANTYRMQAHTNADDDTRYRESSEVAEWRAK-DPVNRMRAYLTDRGLLDDDGEARI 350 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++ + + D DP EL+ + Sbjct: 351 AVHAEAVAAQLRDGLSEDVPVDPQELFRHVF 381 >gi|300768286|ref|ZP_07078191.1| pyruvate dehydrogenase complex E1 component alpha subunit [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494350|gb|EFK29513.1| pyruvate dehydrogenase complex E1 component alpha subunit [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 370 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 94/313 (30%), Positives = 149/313 (47%), Gaps = 16/313 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 VS+++ EQ + ++LML R +++ L G +G F GQEA +G ++ + D Sbjct: 39 VSKYSNEQLVEFFKLMLWERTLHQRSNALTRQGRLG-FYAPTEGQEASEMGSNAAMKKTD 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ AYR+ ++ G+ K A L R + H + I+GAQ Sbjct: 98 VLMPAYRDIPQLIQHGLPVYK--AFLWSRGHVLGNEYPEDFHAMPPQI-------IIGAQ 148 Query: 164 VSLGTGIAFA-NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 G+A K DK+ GDG +QG YE N A + +++++NN YA+ Sbjct: 149 YVQAAGVALGIKKNGTEDKVAYTYTGDGGTSQGDFYEGMNFAGAFEAPAVFIVQNNGYAI 208 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +A +++ V+ IP +QVDGMD AV A Y A GP++IE LTY Sbjct: 209 SVPRRKQTAAKTLAQKAVAAGIPSVQVDGMDFLAVYEVTKAAREYAAAGNGPVMIETLTY 268 Query: 283 RYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 R+ H+ + DP YRT++E N DP+ + RK L SE E V++ I Sbjct: 269 RFGPHTNAGDDPKRYRTKDEEQPWFDN-DPLIRYRKYLTDQGVWSEDQENEYVEQVKEDI 327 Query: 341 NNSVEFAQSDKEP 353 +V+ Q+D+ P Sbjct: 328 KAAVK--QADEAP 338 >gi|308178212|ref|YP_003917618.1| 2-oxoacid dehydrogenase E1 component subunit alpha [Arthrobacter arilaitensis Re117] gi|307745675|emb|CBT76647.1| 2-oxoacid dehydrogenase E1 component alpha chain [Arthrobacter arilaitensis Re117] Length = 387 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 91/323 (28%), Positives = 151/323 (46%), Gaps = 12/323 (3%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G E + + L AY ++ RR ++ L G + + GQEA V + L Sbjct: 52 GHEYPLPSPARLLEAYSALVTGRRVNDQNSALVRQGRMAVYPS-SHGQEACQVAASLCLG 110 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 EGD + YR+ +LA GV ++M G K + ST + Sbjct: 111 EGDWLFPTYRDTVAVLAKGVAPMEVMTSFRGEWHCGYDPKAYNCAPMSTP---------L 161 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q+ G+A A K R D + V GDGA ++G +E+ N AA++NL VI+ ++NN+Y Sbjct: 162 TTQLLHAVGVAHAAKLRGEDTVVVAMCGDGATSEGDFHEALNFAAVFNLPVIFFVQNNKY 221 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ +S+ SA + + + V + + G +VDG D+ A+ A M +AV R GP++IE Sbjct: 222 AISVPLSQQSAAPSLAHKAVGYGMAGERVDGNDLMALMAIMTRAVRMAREGNGPLLIEAH 281 Query: 281 TYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR + H+ D YR E+ E + DP+ +++ L S+ + +I + + Sbjct: 282 TYRMQAHTNADDDKRYREDSEVQEWIAK-DPVTRMKAYLDDAGLLSDETVAKITADAEAV 340 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 + + DP EL+ + Sbjct: 341 AKTLRDGMNQEANTDPRELFEHV 363 >gi|224476208|ref|YP_002633814.1| pyruvate dehydrogenase E1 component subunit alpha [Staphylococcus carnosus subsp. carnosus TM300] gi|222420815|emb|CAL27629.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus carnosus subsp. carnosus TM300] Length = 370 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 89/295 (30%), Positives = 144/295 (48%), Gaps = 19/295 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + +Q + M+ R ++++ L G +G F GQEA + + +L +GD Sbjct: 40 LPDLTDDQLVELMERMVWTRVLDQRSVSLNRQGRLG-FYAPTAGQEASQLASQYALEKGD 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ ++ S+G M N F I+GAQ Sbjct: 99 WILPGYRDVPQLIWHGLPLTEAFL--------FSRGHFKGNQMPEGVNAF-SPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K R + + GDG ++QG YE N A+ + + I+VI+NN YA+ Sbjct: 150 YVQTAGVALGIKKRGKKAVAITYTGDGGSSQGDFYEGINFASAYKVPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A +++ ++ IPG+QVDGMD AV +A +GP +IE +TYR Sbjct: 210 TPRSKQTAAQTLAQKAIAVGIPGIQVDGMDPLAVYQATKEARDRAVNGEGPTLIETMTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEM 334 Y H+M+ DP YRT +E +E DP+ + RK L K W+ E KE E+ Sbjct: 270 YGPHTMAGDDPTRYRTSDEDSEW-EKKDPLVRFRK-FLEGKGLWSEE---KETEV 319 >gi|222150960|ref|YP_002560113.1| pyruvate dehydrogenase E1 component alpha subunit [Macrococcus caseolyticus JCSC5402] gi|222120082|dbj|BAH17417.1| pyruvate dehydrogenase E1 component alpha subunit [Macrococcus caseolyticus JCSC5402] Length = 371 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/343 (29%), Positives = 160/343 (46%), Gaps = 18/343 (5%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLEGFEVS-----EFNKEQELSAYRLMLLIRRFEEK 68 K A +VS + S + V + L+G V+ + EQ + M+ R +++ Sbjct: 5 KQAPFDAVSTLQEIESKFEVVQVLDLDGNVVNKDFMPDLTDEQLVELMERMVWTRVLDQR 64 Query: 69 AGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAE 128 + L G +G F GQEA + +L + D ++ YR+ ++ G+ +K Sbjct: 65 SISLNRQGRLG-FYAPTAGQEASQLASHYALEKQDYILPGYRDVPQLIWHGLPLTKAFL- 122 Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFG 188 S+G M N I+GAQ G+A K R D + + G Sbjct: 123 -------WSRGHFVGSQMPEGMNAL-APQIIIGAQYVQTAGVALGLKKRGQDAVAITYTG 174 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ 248 DG ++QG YE N A+ + I+VI+NN YA+ T S+ +A +++ V+ IPG+ Sbjct: 175 DGGSSQGDFYEGINFASAFKAPAIFVIQNNNYAISTPRSKQTAAKTLAQKAVAVGIPGIV 234 Query: 249 VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRS 306 VDGMD AV +A A +GP +IE +TYRY H+M+ DP YRT +E +E Sbjct: 235 VDGMDALAVYQATKEARDRAVAGEGPTLIETITYRYGPHTMAGDDPTRYRTSDEDDEW-V 293 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 DP+ + RK L SE E+ ++ I N+++ A + Sbjct: 294 KKDPLVRFRKFLEAKGLWSEEKENEVMDRAKEDIKNAIKEADA 336 >gi|330464991|ref|YP_004402734.1| pyruvate dehydrogenase [Verrucosispora maris AB-18-032] gi|328807962|gb|AEB42134.1| pyruvate dehydrogenase (acetyl-transferring) [Verrucosispora maris AB-18-032] Length = 391 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/340 (29%), Positives = 161/340 (47%), Gaps = 23/340 (6%) Query: 31 VDCVDIPFLEGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQE 89 +D V P +G E +F E+ YR ++L+R+ + +A L G +G + L +GQE Sbjct: 40 IDSVTGP--DGVEYRVDFTDEEYRGLYRDLVLVRKLDAEATALQRQGELGLWASL-LGQE 96 Query: 90 AVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTG-RQGGISKGKGGSMHMFS 148 A VG +L D YREHG + G+D + G QGG + +M++ Sbjct: 97 AAQVGSGRALRAQDMAFPTYREHGVLYCRGIDPIMPLGLFRGVDQGGWDPNEF-KFNMYT 155 Query: 149 TKNGFYGGHGIVGAQVSLGTG----IAFANKYRRSDKICVVC-FGDGAANQGQVYESFNI 203 ++GAQ TG +A K D V+ FGDGA +QG V E+F Sbjct: 156 I---------VIGAQTLHATGYAMGVAMDGKTGGEDGEAVIAYFGDGATSQGDVNEAFVW 206 Query: 204 AALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 A+++N +++ +NNQYA+ + R + + +R F PG++VDG D+ A A Sbjct: 207 ASVFNAPLVFFCQNNQYAISEPLERQT-RVPLYRRAAGFGFPGVRVDGNDVLATYAVARH 265 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 A+ R +GP +IE TYR H+ S DP YR E+ ++ DPI +++ L K Sbjct: 266 ALDNARNGQGPSLIEAYTYRMGAHTTSDDPTRYRIASEVEAWQAK-DPIARMKAFLEREK 324 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 A E++ R+ + E + P+P ++ + Sbjct: 325 IADSDFFAEVDEQARREAIDLRERVLAMPNPEPVTMFDHV 364 >gi|325284052|ref|YP_004256593.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Deinococcus proteolyticus MRP] gi|324315861|gb|ADY26976.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Deinococcus proteolyticus MRP] Length = 389 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 148/325 (45%), Gaps = 28/325 (8%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + E +L YR M IR F+E+A LY G +G F G EA G +LT D + Sbjct: 64 DAETQLWLYRQMRRIRHFDERAWVLYRQGKMGVFPPYG-GMEASQAGTAAALTTQDWLFP 122 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI-------- 159 YR+ G L G+ + +A + S+ +G+Y + Sbjct: 123 TYRDTGAALTYGLPIRQTVA-----------------YWRSSPHGWYMPEDLKITPFYIP 165 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + Q G A A K + + + + GDG +++G +E N A N +++++NN Sbjct: 166 IATQYPQAVGAALAEKKKGTRNVAMAFIGDGGSSEGDFHEGLNFAGALNAPCVFILQNNG 225 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+ + + N S+R + +PG++VDG DI AV A +AV R GP +IE Sbjct: 226 WAISVPTTTQTRARNLSRRADGYGVPGLRVDGNDILAVYAVTKQAVERARDGDGPSLIET 285 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 +T+R + H+++ DP YRT +E+ DP+ ++R LL +E + + Sbjct: 286 VTFRIKPHTVADDPTRYRT-DEMTAGWDAKDPVLRLRTYLLAQGTLTEASEAALLEEISA 344 Query: 339 IINNSVEFAQSDKEPDPAELYSDIL 363 +V A S +P PAE+ + Sbjct: 345 EFEEAVAAADSLPDPTPAEIVDHVF 369 >gi|326328620|ref|ZP_08194960.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Nocardioidaceae bacterium Broad-1] gi|325953581|gb|EGD45581.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Nocardioidaceae bacterium Broad-1] Length = 395 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 103/333 (30%), Positives = 149/333 (44%), Gaps = 25/333 (7%) Query: 42 FEVSEFNKEQEL--SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 FE S E E YR M+L RR + +A L G +G + L +GQEA +G +L Sbjct: 47 FEFSPDRPEDEAVRGFYRDMVLTRRLDVEATALQRHGELGLWAQL-LGQEAAQIGAARAL 105 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHG 158 D + YREHG VD +++ G QGG + H F G Y Sbjct: 106 APQDFVFPTYREHGVAWCRDVDPMQLLGLFRGTDQGGWDPDE----HNF----GLY--TI 155 Query: 159 IVGAQVSLGTGIAFANKY--------RRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 ++GAQ TG A + D V FGDGA++QG V E+ AA +N Sbjct: 156 VIGAQTLHATGYAMGVQMDGLVGTGDPTRDTAVVAHFGDGASSQGDVNEAMVFAASYNAP 215 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 V++ +NNQ+A+ V + + KR F PG++VDG D+ A M A+ R Sbjct: 216 VVFFCQNNQWAISEPVEQM-VKVPLYKRAQGFGFPGIRVDGNDVLATYEVMKSALKRARE 274 Query: 271 HKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 GP +IE TYR H+ + DP YR +E+ + DPI +V L AS Sbjct: 275 GGGPTMIEAYTYRMGAHTTTDDPTRYRLSDEVEAWKLK-DPIARVEAYLRRGGGASSSFF 333 Query: 330 KEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++E ++ + EPDP L+ ++ Sbjct: 334 AKVEAEAEELGERLRAGIHALPEPDPVRLFDNV 366 >gi|227551276|ref|ZP_03981325.1| pyruvate dehydrogenase (acetyl-transferring) [Enterococcus faecium TX1330] gi|257896103|ref|ZP_05675756.1| pyruvate dehydrogenase [Enterococcus faecium Com12] gi|257898737|ref|ZP_05678390.1| pyruvate dehydrogenase [Enterococcus faecium Com15] gi|293377521|ref|ZP_06623717.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecium PC4.1] gi|293571957|ref|ZP_06682971.1| pyruvate dehydrogenase [Enterococcus faecium E980] gi|227179556|gb|EEI60528.1| pyruvate dehydrogenase (acetyl-transferring) [Enterococcus faecium TX1330] gi|257832668|gb|EEV59089.1| pyruvate dehydrogenase [Enterococcus faecium Com12] gi|257836649|gb|EEV61723.1| pyruvate dehydrogenase [Enterococcus faecium Com15] gi|291607975|gb|EFF37283.1| pyruvate dehydrogenase [Enterococcus faecium E980] gi|292643890|gb|EFF62004.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecium PC4.1] Length = 369 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 17/298 (5%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + + + D ++ YR+ ++ Sbjct: 54 MVWSRVLDQRSTALNRQGRLGFFAPTA-GQEASQLASAYAFDKEDVLLPGYRDVPQLVKH 112 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ S+ G G S + + I+GAQ G+A K R Sbjct: 113 GLPLSQAFLWSRGHAAGNS---------YPEELKALPPQIIIGAQYVQAAGVALGLKKRN 163 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + GDG ++QG YE+ N A ++ N ++ I+NN YA+ T + +A +++ Sbjct: 164 KKNVVFTYTGDGGSSQGDFYEAINFAGAYHANAVFYIQNNGYAISTPREKQTAAKTLAQK 223 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ IPG+QVDGMD AV A + + GP++IE LTYRY H++S DP YR Sbjct: 224 AVAAGIPGIQVDGMDPLAVYTVSKMAREWAISGNGPVLIETLTYRYGPHTLSGDDPTRYR 283 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 T++ +E + DP+ + RK L W+ E + + IE +I A++DK P Sbjct: 284 TKDTDDEWQKK-DPLIRFRKYLTEKGLWSEEKEEQVIEATKEEI---KAAIAEADKVP 337 >gi|322369691|ref|ZP_08044255.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Haladaptatus paucihalophilus DX253] gi|320550861|gb|EFW92511.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Haladaptatus paucihalophilus DX253] Length = 346 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 80/265 (30%), Positives = 130/265 (49%), Gaps = 13/265 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YRL +L R F+EKA L+ G +G + L GQEA VG +L+ D YR+HG Sbjct: 26 YRLQVLARTFDEKAVSLHRQGRIGTYAPLQ-GQEAAQVGAAYALSPDDYCFPTYRDHGIY 84 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G I+ L+G + + + F + Q+ G+ Sbjct: 85 ITRGHAMRDILLHLSGAGNYVDREDADGLRTFPPTIP-------IATQLPHAVGVGMGAN 137 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y D + FGDGA ++G +E+ N A ++ ++ +NNQ+A+ R +A Sbjct: 138 YTDDDCAVLASFGDGATSEGDFHEALNFAGVFETPTVFFCQNNQWAISVPRERQTASATI 197 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMS-DPA 293 +++ ++ G++VDG D+ AV T+ A+ RA +G PI+IE +TYR H+ + DP Sbjct: 198 AQKAQAYGFEGVRVDGNDVLAVYRTVSDALE--RAKEGEPILIEAVTYRQGAHTTTDDPT 255 Query: 294 NYRTREEINEMRSNHDPIEQVRKRL 318 YR E++ + DPIE+ R+ L Sbjct: 256 KYRDDAEVDAW-AEKDPIERTREYL 279 >gi|27467709|ref|NP_764346.1| pyrubate dehydrogenase E1 component alpha subunit [Staphylococcus epidermidis ATCC 12228] gi|57866606|ref|YP_188264.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Staphylococcus epidermidis RP62A] gi|242242398|ref|ZP_04796843.1| pyrubate dehydrogenase E1 component alpha subunit [Staphylococcus epidermidis W23144] gi|251810546|ref|ZP_04825019.1| pyrubate dehydrogenase E1 component alpha subunit [Staphylococcus epidermidis BCM-HMP0060] gi|282876549|ref|ZP_06285414.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus epidermidis SK135] gi|293366919|ref|ZP_06613594.1| pyruvate dehydrogenase complex E1 component [Staphylococcus epidermidis M23864:W2(grey)] gi|38604828|sp|Q8CPN3|ODPA_STAES RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|81674993|sp|Q5HQ76|ODPA_STAEQ RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|27315253|gb|AAO04388.1|AE016746_178 pyrubate dehydrogenase E1 component alpha subunit [Staphylococcus epidermidis ATCC 12228] gi|57637264|gb|AAW54052.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Staphylococcus epidermidis RP62A] gi|242234105|gb|EES36417.1| pyrubate dehydrogenase E1 component alpha subunit [Staphylococcus epidermidis W23144] gi|251805957|gb|EES58614.1| pyrubate dehydrogenase E1 component alpha subunit [Staphylococcus epidermidis BCM-HMP0060] gi|281294637|gb|EFA87166.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus epidermidis SK135] gi|291318894|gb|EFE59265.1| pyruvate dehydrogenase complex E1 component [Staphylococcus epidermidis M23864:W2(grey)] gi|319401584|gb|EFV89794.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus epidermidis FRI909] gi|329732841|gb|EGG69187.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus epidermidis VCU144] gi|329734221|gb|EGG70537.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus epidermidis VCU028] gi|329735542|gb|EGG71830.1| pyruvate dehydrogenase E1 component, alpha subunit [Staphylococcus epidermidis VCU045] Length = 370 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 91/277 (32%), Positives = 136/277 (49%), Gaps = 13/277 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + EQ + M+ R ++++ L G +G F GQEA + + +L D Sbjct: 40 VPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQYALESED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ + A L R G KG + F I+GAQ Sbjct: 99 FILPGYRDVPQIIWHGLPLTD--AFLFSR--GHFKG-----NQFPEGVNALSPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+AF K R + + + GDG ++QG YE N A+ + I+VI+NN YA+ Sbjct: 150 YIQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A +++ +S IPG+QVDGMD AV +A A +GP +IE LTYR Sbjct: 210 TPRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIETLTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 Y H+M+ DP YRT +E E DP+ + RK L Sbjct: 270 YGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKYL 305 >gi|86158251|ref|YP_465036.1| 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) [Anaeromyxobacter dehalogenans 2CP-C] gi|85774762|gb|ABC81599.1| 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) [Anaeromyxobacter dehalogenans 2CP-C] Length = 397 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 94/314 (29%), Positives = 153/314 (48%), Gaps = 4/314 (1%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYR 110 + L YR M+L R +E+ L G +G F IG+EA ++G ++ E D + YR Sbjct: 53 EALRLYRWMVLNRALDERMITLQRQGRIG-FYIGSIGEEATVLGTAAAMDERDWIYPCYR 111 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 EHG L G+ + +L G G KG+ H F + QVS G Sbjct: 112 EHGAALLRGMPLVTFVCDLFGNGGDAMKGRQMPCHEAWRPGRFTSISSPIATQVSQAMGG 171 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A+A K + + + + FG+GA + + N AA+ + V++V NN +A+ R + Sbjct: 172 AWAAKLKGEEMVAITYFGEGATSAHDFHTGLNFAAVRKIPVVFVCRNNGWAISVPRERQT 231 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A +++ +++ + G +VDG D+ AV A +A A A +GP ++E +TYR GHS S Sbjct: 232 ASETIAQKAIAYGMRGERVDGNDLLAVYAATRRARARAAAGEGPTLLECVTYRIEGHSTS 291 Query: 291 -DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 DP YR E+ E DPI ++R+ L E + VR+ I +++ A++ Sbjct: 292 DDPRAYRP-AELVEPWKRKDPILRMRRYLSKRGALDEAQDAALRDEVREQIQQALKEAEA 350 Query: 350 DKEPDPAE-LYSDI 362 P E L++D+ Sbjct: 351 FPAKPPIETLFADV 364 >gi|81428695|ref|YP_395695.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Lactobacillus sakei subsp. sakei 23K] gi|78610337|emb|CAI55386.1| Pyruvate dehydrogenase complex, E1 component, alpha subunit [Lactobacillus sakei subsp. sakei 23K] Length = 369 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 93/307 (30%), Positives = 156/307 (50%), Gaps = 19/307 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + EQ + + M+ R +++A L G +G F GQEA + ++ + D Sbjct: 39 MPDLSDEQLVELMKQMVWSRVLDQRATALNRQGRLG-FYAPTAGQEASQLASNFAMNKDD 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YR+ ++ G+ S+ A L R G I G+ + S K I+GAQ Sbjct: 98 FLFPGYRDVPQLVQHGLPLSQ--AFLWSR-GHIE----GNKYPESLKA--MPPQIIIGAQ 148 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K R+S V GDG +QG YE N A + I+V++NN +A+ Sbjct: 149 YIQAMGVAVGMKKRQSKNAVYVYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNGFAIS 208 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + +A +++GV+ IP +QVDGMD AV M +A + A GP++IE LTYR Sbjct: 209 VPREKQTAAVTLAQKGVAAGIPAIQVDGMDSLAVYEVMKEARDFTTAGNGPVLIETLTYR 268 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGD---LKEIEMNV 336 Y H++S DP YRT+ E +++ DP+ ++R R L NK W+ + + + +++ + Sbjct: 269 YGPHTLSGDDPTRYRTK-ETDDIWLKRDPLVRMR-RFLTNKGLWSEDQENELIDQVKAAI 326 Query: 337 RKIINNS 343 ++ IN + Sbjct: 327 KEAINEA 333 >gi|206900583|ref|YP_002250184.1| pyruvate dehydrogenase E1 component, beta subunit [Dictyoglomus thermophilum H-6-12] gi|206739686|gb|ACI18744.1| pyruvate dehydrogenase E1 component, beta subunit [Dictyoglomus thermophilum H-6-12] Length = 791 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/384 (26%), Positives = 170/384 (44%), Gaps = 74/384 (19%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQL------YG--MGMVGGFCHLCIGQEAVIVGMKMSL 99 KE+ + ++ ML+IR FEE +L YG + G HL IGQEAV G + Sbjct: 41 TKEESIDLFKCMLMIRNFEEMIYELRVNKGKYGNIRYLYIGATHLSIGQEAVPTGGISVI 100 Query: 100 TEGDQMITAYREHGHILA------------------------------------------ 117 + D + + +R HG +A Sbjct: 101 KKDDYITSTHRGHGDAIAKSYFGLKDMSEEELIAFIENNREIASFLGYEWKNKDRNTLYQ 160 Query: 118 --CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 ++ K + EL G++ G KG+GGSMH+ G G + IVG + + G A A++ Sbjct: 161 YALDIELFKAIGELFGKEWGACKGRGGSMHIADFSVGHLGANAIVGGSMGIAVGSAMASR 220 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAAL-----------WNLNVIYVIENNQYA-MG 223 Y ++ + GDGA N G +E+ N+A + + + VI+++ NNQY G Sbjct: 221 YMEDGRVTLCFIGDGAMNTGIAHEAINMACMSQFTNGLMSKRFGVPVIFMVMNNQYGESG 280 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 + ++RG +++ GM V+ M++ AV+ + +AV R +GPI++E Sbjct: 281 QQRGEVTGIDYIAERGFAYSKNGMNAEIVNAMNVLAVRDAVKRAVEKARKGEGPILLEFW 340 Query: 281 TYRYRGHSMSDP------ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 YR+ GHS+SD YRT +E+ + +DP+E K L+ + + +++ ++ Sbjct: 341 GYRFMGHSLSDTLEKPEDGTYRTYDELQAWK-KYDPLELYAKELIDAEVLTPEEIENLKK 399 Query: 335 NVRKIINNSVEFAQSDKEPDPAEL 358 R+ N PDP ++ Sbjct: 400 EYRQRNENIAAKVIESPNPDPKDM 423 >gi|302384438|ref|YP_003820261.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Brevundimonas subvibrioides ATCC 15264] gi|302195066|gb|ADL02638.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Brevundimonas subvibrioides ATCC 15264] Length = 410 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 85/287 (29%), Positives = 146/287 (50%), Gaps = 10/287 (3%) Query: 40 EGFEVSEFNK----EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 EG V +N E + M+L R F+++ + + G F C G+EA+ V Sbjct: 62 EGNAVGPWNPRLDAETLKKGLKAMILTRAFDDRMHRAHRQGKTS-FYMKCTGEEAIAVAQ 120 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFY 154 M L+ D YR+ G ++A G ++M ++ KG+ + M+S K+ GF+ Sbjct: 121 GMILSREDMGFPTYRQQGLLIARGYPLVEMMNQIYSNAADPIKGRQLPI-MYSAKDYGFF 179 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G +G QV G A A+ Y+ DKI + GDGA +G + + A+++ VI Sbjct: 180 TISGNLGTQVPQAVGWAMASAYKGDDKIAIAWIGDGATAEGDFHNALTFASVYRAPVILN 239 Query: 215 IENNQYAMGTSVSRASA-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 + NNQ+A+ + + A +T F+ + + + +P ++VDG D AV A A R+++G Sbjct: 240 VVNNQWAISSFMGIAGGLETTFASKAIGYGLPALRVDGNDFLAVWAATQWAEERARSNQG 299 Query: 274 PIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +IE+ TYR HS S DP+ YR +E ++ DP+ ++++ L+ Sbjct: 300 ATVIELFTYRGAPHSTSDDPSRYRPGDEHDQWPLG-DPVARLKQHLI 345 >gi|51893300|ref|YP_075991.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Symbiobacterium thermophilum IAM 14863] gi|51856989|dbj|BAD41147.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Symbiobacterium thermophilum IAM 14863] Length = 352 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 96/314 (30%), Positives = 146/314 (46%), Gaps = 5/314 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +Q Y MLL RR +E+ L G + F GQEA VG + Sbjct: 32 LTADQVREMYYYMLLTRRLDERLWLLQRGGKIP-FVISPQGQEAAQVGAAFAFRRRQDWF 90 Query: 107 TAY-REHGHILACGVDASKIMAELTGRQGG-ISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 T Y R+ G L GV ++M R S GK H + G V QV Sbjct: 91 TPYYRDLGVNLVVGVTPREVMLSAFARGADPASGGKQMPSHWGNRPLNIVSGSSPVTTQV 150 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 GIA A + R D + G+G++NQG +E+ N A L L VI++++NN+YA+ Sbjct: 151 LHAVGIAQAARMRGDDVVVYTACGEGSSNQGDFHEALNWAGLHKLPVIFMVQNNEYAISV 210 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +S+ A + + RG + +PG++VDG D+ AV + +A R +GP +IE R Sbjct: 211 PLSQQVAGGSVAARGRGYGMPGVEVDGTDVLAVYEVVKEAHERARRGEGPTLIEARCIRI 270 Query: 285 RGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D YR EEI ++ DPI + R+ L + E +E+E V I++++ Sbjct: 271 TSHSSDDDQRRYRDPEEIAAVQVR-DPIRKARQYLFEHGLMDEAAEQELERKVAAIVDDA 329 Query: 344 VEFAQSDKEPDPAE 357 ++A++ P E Sbjct: 330 TDWAEAQPYAAPEE 343 >gi|257887608|ref|ZP_05667261.1| pyruvate dehydrogenase [Enterococcus faecium 1,141,733] gi|257823662|gb|EEV50594.1| pyruvate dehydrogenase [Enterococcus faecium 1,141,733] Length = 369 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 17/298 (5%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + + + D ++ YR+ ++ Sbjct: 54 MVWSRVLDQRSTALNRQGRLGFFAPTA-GQEASQLASAYAFDKEDVLLPGYRDVPQLVKH 112 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ S+ G G S + + I+GAQ G+A K R Sbjct: 113 GLPLSQAFLWSRGHAAGNS---------YPEELKALPPQIIIGAQYVQAAGVALGLKKRN 163 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + GDG ++QG YE+ N A ++ N ++ I+NN YA+ T + +A +++ Sbjct: 164 KKNVVFTYTGDGGSSQGDFYEAINFAGAYHANAVFYIQNNGYAISTPREKQTAAKTLAQK 223 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ IPG+QVDGMD AV A + + GP++IE LTYRY H++S DP YR Sbjct: 224 AVAAGIPGIQVDGMDPLAVYTVSKMAREWAISGNGPVLIETLTYRYGPHTLSGDDPTRYR 283 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 T++ +E + DP+ + RK L W+ E + + IE +I A++DK P Sbjct: 284 TKDTDDEWQ-RKDPLIRFRKYLTEKGLWSEEKEEQVIEATKEEI---KAAIAEADKVP 337 >gi|116622787|ref|YP_824943.1| dehydrogenase, E1 component [Candidatus Solibacter usitatus Ellin6076] gi|116225949|gb|ABJ84658.1| dehydrogenase, E1 component [Candidatus Solibacter usitatus Ellin6076] Length = 697 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 100/332 (30%), Positives = 157/332 (47%), Gaps = 18/332 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLC-IGQEAVIVGMKMSLTEG 102 V +Q + A+R+M RR +++ L + F + G EAV V MSL G Sbjct: 14 VDVLTPDQLIRAFRIMHTARRLDDREIALKRQNRI--FFQISGAGHEAVQVAAAMSLRPG 71 Query: 103 -DQMITAYREHGHILACGVDASKIMAELTGRQG-GISKGKGGSMHMFSTKNGFYGGHGIV 160 D + YR+ LA GV +++ + G S G+ H + Sbjct: 72 RDWVYPYYRDRALCLALGVTPLEMLQQAVGAAADPASGGRQMPSHWGNAAYNIVSSSSPT 131 Query: 161 GAQVSLGTGIAFANKYR--RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 G Q + G A A +YR +SD+I +VC G+GA ++G+ +ES NIAAL L ++Y+IE+N Sbjct: 132 GTQYNQAAGCAEAGRYRDPKSDEITLVCSGEGATSEGEFWESLNIAALKRLPLLYLIEDN 191 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGM---QVDGMDIRAVKATMDKAVAYCRAHKGPI 275 YA+ + + +A + S ++ IPG+ ++DG D A M AV YCR GP Sbjct: 192 GYAISVPIEQQTAGGSIS--ALTAAIPGLFRQEIDGTDFFASWQAMQAAVRYCREGSGPA 249 Query: 276 IIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 ++ R HS+SD Y+T E + DP+ + K L+ L++I Sbjct: 250 LVHAHCIRPYSHSLSDDERLYKTPAE-RAAEAERDPVLRFPKLLIDEGVLDRRMLQDITH 308 Query: 335 NVRKIINNSVEFAQSDKEPDPA----ELYSDI 362 + + I + + A D+ P PA LYSD+ Sbjct: 309 EIDEEIQQATQTALHDEPPSPASALVHLYSDL 340 >gi|12045130|ref|NP_072941.1| pyruvate dehydrogenase component E1, alpha subunit [Mycoplasma genitalium G37] gi|255660370|ref|ZP_05405779.1| pyruvate dehydrogenase component E1, alpha subunit [Mycoplasma genitalium G37] gi|1352622|sp|P47516|ODPA_MYCGE RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|3844867|gb|AAC71496.1| pyruvate dehydrogenase component E1, alpha subunit [Mycoplasma genitalium G37] gi|166078796|gb|ABY79414.1| pyruvate dehydrogenase component E1, alpha subunit [synthetic Mycoplasma genitalium JCVI-1.0] Length = 358 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 148/299 (49%), Gaps = 16/299 (5%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 EQ AY LM L R ++K G + F +G+EA+ VGM + L E D + + Sbjct: 35 EQLKHAYYLMNLSRMMDKKMLVWQRAGKMLNFAP-NLGEEALQVGMGLGLNENDWVCPTF 93 Query: 110 REHGHILACGVDASKIMAELTGRQGGIS-KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 R +L GV +++ G + G K ++ + T +GAQ S Sbjct: 94 RSGALMLYRGVKPEQLLLYWNGNEKGSQIDAKYKTLPINIT----------IGAQYSHAA 143 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+ + Y++ + V GDG +G+ YE+ NIA++ N ++ I NNQ+A+ T Sbjct: 144 GLGYMLHYKKQPNVAVTMIGDGGTAEGEFYEAMNIASIHKWNTVFCINNNQFAISTRTKL 203 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 SA ++ S + ++ IP ++VDG D+ A M A Y R GP++IE +YR H+ Sbjct: 204 ESAVSDLSVKAIACGIPRVRVDGNDLIASYEAMQDAANYARGGNGPVLIEFFSYRQGPHT 263 Query: 289 MS-DPANYRTREEINE-MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 S DP+ YRT++E E M+S DP++++R L ++ +E+ + + I + E Sbjct: 264 TSDDPSIYRTKQEEEEGMKS--DPVKRLRNFLFDRSILNQAQEEEMFSKIEQEIQAAYE 320 >gi|159471820|ref|XP_001694054.1| mitochondrial branched-chain alpha-ketoacid dehydrogenase complex, E1 alpha [Chlamydomonas reinhardtii] gi|158277221|gb|EDP02990.1| mitochondrial branched-chain alpha-ketoacid dehydrogenase complex, E1 alpha [Chlamydomonas reinhardtii] Length = 356 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 81/283 (28%), Positives = 136/283 (48%), Gaps = 3/283 (1%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA +G L D + YRE G +L G + +L G KG+ Sbjct: 75 FYLTCQGEEATNIGSAAGLGGQDMVFAQYREQGVLLWRGYTLDQFANQLLGNALEPGKGR 134 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + + + Q+ G A+ K R ++ V FGDGA+++G + + Sbjct: 135 QMPIHYGSPELAYQTISSPLATQMPHAVGTAYGYKMDRLPRVAVTYFGDGASSEGDAHAA 194 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN AA+ ++V NN YA+ T + RG + IP ++VDG D+RAV Sbjct: 195 FNFAAVLGAPCLFVCRNNGYAISTPAHEQYKGDGIAGRGPMYGIPSIRVDGGDVRAVYNA 254 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + + A GP++IE ++YR HS SD + YRT EE+ R+ DP+ + R L+ Sbjct: 255 VGQGQQQA-AEPGPVLIECMSYRSGHHSTSDDSTRYRTSEEMGAWRAR-DPVARFRSWLV 312 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 W E E+ + R+ + +++ A +P +++++D+ Sbjct: 313 RQGWWDEAREAELRRSTRQEVLAALDRAAQVPKPPLSDMFTDV 355 >gi|314933290|ref|ZP_07840655.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus caprae C87] gi|313653440|gb|EFS17197.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus caprae C87] Length = 370 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 89/277 (32%), Positives = 138/277 (49%), Gaps = 13/277 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + EQ + ++ R ++++ L G +G F GQEA + + +L + D Sbjct: 40 VPDLTDEQLVELMERIVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQYALEKED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ ++ A L R G KG + F I+GAQ Sbjct: 99 FILPGYRDVPQIIWHGLPLTE--AFLFSR--GHFKG-----NQFPEGVNALSPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+AF K R + + GDG ++QG YE N A+ + I+VI+NN YA+ Sbjct: 150 YVQTAGVAFGLKKRGKSAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A T +++ ++ +PG+QVDGMD AV +A A +GP +IE LTYR Sbjct: 210 TPRSKQTAATTLAQKAIAVGVPGIQVDGMDALAVYQATLEARERAVAGEGPTVIETLTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 Y H+M+ DP YRT +E E DP+ + RK L Sbjct: 270 YGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKYL 305 >gi|313125421|ref|YP_004035685.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Halogeometricum borinquense DSM 11551] gi|312291786|gb|ADQ66246.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Halogeometricum borinquense DSM 11551] Length = 357 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 80/253 (31%), Positives = 129/253 (50%), Gaps = 13/253 (5%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S ++E + +R M+ RRF+E+A L G + G+ +GQEA VG ++ E D Sbjct: 22 SWLDEEDARAVFRDMIRTRRFDERALALQRRGWMSGYPPF-LGQEASQVGAAHAMREDDM 80 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR + +A GV S I+A GR +S + +F + Q+ Sbjct: 81 LFPTYRSNALQIARGVPMSDILAFRRGRAEYLSDH---DIPVFPQAVP-------IATQI 130 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L TG A Y D +VCFGDGA ++G +E N A +++ V++ ENN +A+ Sbjct: 131 PLATGAGMAANYSDDDHAILVCFGDGATSEGDFHEGLNFAGVFDAPVVFFCENNAWAISL 190 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 R +A + + + ++ G+QVDG D AV+ T+ +A++ R PI++E LTYR Sbjct: 191 PRDRQTASDSIAVKAEAYGFEGVQVDGNDPLAVRETVSEALSDAR-DGNPILVESLTYRQ 249 Query: 285 RGHSMS-DPANYR 296 H+ + DP+ YR Sbjct: 250 GAHTTADDPSAYR 262 >gi|289739851|gb|ADD18673.1| branched chain alpha-keto acid dehydrogenase complex alpha subunit [Glossina morsitans morsitans] Length = 432 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 86/318 (27%), Positives = 148/318 (46%), Gaps = 3/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE +R M+L+ ++ + G + F G+EA +G +L D + Sbjct: 83 LSKETVQKMFRDMILLNTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAALEIRDVIY 141 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YRE G ++ G + + + G + + KGK +H S F + Q+ Sbjct: 142 GQYREAGVLVWRGFTIEQFIDQCYGNEADVGKGKQMPVHYGSKDLNFVTISSPLATQMPQ 201 Query: 167 GTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A+A K R+++ CVVC FG+GAA++G + +FN AA N VI NN +A+ T Sbjct: 202 AVGAAYAMKRRKNNDACVVCYFGEGAASEGDAHAAFNFAATLNCPVILFCRNNGFAISTP 261 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + RG + I ++VDG D+ AV M Y P ++E + YR Sbjct: 262 AHEQYKGDGIAGRGPGYGIATIRVDGTDVFAVYNAMKLCREYVMKESKPAVLEAMAYRVG 321 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HS SD + YR+ EI S PI +++ ++ W +E + + ++RK + + Sbjct: 322 HHSTSDDSTAYRSSAEIEVWNSVEHPISKLKNYMVKRDWFNEAEENDFVKDIRKKVLKQI 381 Query: 345 EFAQSDKEPDPAELYSDI 362 ++ +P+ EL++D+ Sbjct: 382 SISEKKLKPNWKELFTDV 399 >gi|260783412|ref|XP_002586769.1| hypothetical protein BRAFLDRAFT_224333 [Branchiostoma floridae] gi|229271894|gb|EEN42780.1| hypothetical protein BRAFLDRAFT_224333 [Branchiostoma floridae] Length = 416 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 91/326 (27%), Positives = 150/326 (46%), Gaps = 4/326 (1%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 +E + + +KE Y M L+ + + G + F G+EA +G + Sbjct: 57 IEADQDPKLSKEAVYDMYHKMTLLNTMDRILYESQRQGRIS-FYMTNYGEEATHMGSAAA 115 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L GD + YRE G ++ G + M + G +G+ +H S + F Sbjct: 116 LNPGDVVFGQYREAGVLMYRGFTLDQFMNQCYGNAEDAGRGRQMPVHYGSKELNFVTISS 175 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 +G Q+ +G A+A K R ++CV+C FGDGAA++G + +FN AA +I+ N Sbjct: 176 PLGTQMPQASGAAYALK-RSGKRLCVICYFGDGAASEGDAHAAFNFAATLECPIIFFCRN 234 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N YA+ T S + RG S+ + ++VDG D AV + A P++I Sbjct: 235 NGYAISTPTSEQYRGDGIAARGPSYGMATLRVDGNDAFAVYNAVKAARELAVNENRPVLI 294 Query: 278 EMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E +TYR HS SD + YR+ +E+N PI ++R +++ W K Sbjct: 295 EAMTYRIGHHSTSDDSTAYRSVDEVNYWDKQDHPIGRLRHYMVNQGWWDMEKEKAWMKQA 354 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDI 362 R + + + A+ K+P P+EL+ D Sbjct: 355 RNEVMQAFQRAEKKKKPPPSELFYDT 380 >gi|299783352|gb|ADJ41350.1| Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit [Lactobacillus fermentum CECT 5716] Length = 363 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 92/322 (28%), Positives = 151/322 (46%), Gaps = 17/322 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + +Q + ++ M+ R ++ +L G +G F G+EA +G ++T+ D Sbjct: 33 MPDLTDDQLVDLFKQMIWSRLVGDQTAKLSRQGRLGFFAPTA-GEEASQMGSNFAMTKDD 91 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ AYR+ ++ G+ +K SKG + N I+GAQ Sbjct: 92 FLLGAYRDVPQLIKHGLSLAKGFM--------WSKGHYNANDYPEELNAL-PPQIIIGAQ 142 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K K+ GDG +QG YE N A + ++ ++NN YA+ Sbjct: 143 YVQTAGVALGIKLNGDKKVAYTYTGDGGTSQGDFYEGINFAGAYQAPAVFFVQNNGYAIS 202 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 +A +++GV+ IP + VDGMD AV A +A Y GP+IIE LTYR Sbjct: 203 VPRKLQTAAPTLAQKGVAAGIPSIVVDGMDALAVYAAAKQARDYAVEGNGPVIIETLTYR 262 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 Y H++S DP YRT+EE +E + DP+ ++RK L + + V K I+ Sbjct: 263 YGPHTLSGDDPTRYRTKEEEDEWHAK-DPLVRMRKFLTDKGLWDDAKEEAYNAEVAKEID 321 Query: 342 NSVEFAQSDKEPDPAELYSDIL 363 ++++ +S PA+ SD L Sbjct: 322 DAIKEVES----QPAQKASDFL 339 >gi|89890943|ref|ZP_01202452.1| oxoisovalerate dehydrogenase alpha and beta fusion [Flavobacteria bacterium BBFL7] gi|89517088|gb|EAS19746.1| oxoisovalerate dehydrogenase alpha and beta fusion [Flavobacteria bacterium BBFL7] Length = 666 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 80/312 (25%), Positives = 150/312 (48%), Gaps = 4/312 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + Y+ MLL R EEK L G + + IGQEA+ +G+ ++ + + ++ +R Sbjct: 23 IQLYQRMLLPRMIEEKMLILLRQGRISKWFS-GIGQEAIAIGVTAAMQKEEYILPMHRNL 81 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G + + K+ A+ G++ G +KG+ S H + G +G Q+ + GIA Sbjct: 82 GVFTSRDIPLWKLFAQWQGKEEGFTKGRDRSFHFGTQDYNIVGMISHLGPQLGVADGIAL 141 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K + + + V G+G ++G +E+ N+A++W+L V++ IENN Y + T Sbjct: 142 AQKLKNTGRATAVFTGEGGTSEGDFHEALNVASVWSLPVLFCIENNGYGLSTPTREQYNC 201 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + + R + + + +DG +I V + + + R + P++IE T+R RGH + Sbjct: 202 DHLADRALGYGMESHIIDGNNIVEVYTKISEILNDIRENPKPVLIEFKTFRRRGHEEASG 261 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE--FAQSD 350 Y E+ E DP+ + + LL S D++ + IN ++ FA++ Sbjct: 262 TKY-VPNELLEYWEQRDPLTRFEQYLLEQDIISNEDIESWSTQYKNDINEGLDIAFAKAL 320 Query: 351 KEPDPAELYSDI 362 E P + +D+ Sbjct: 321 PESTPQQELADV 332 >gi|255550510|ref|XP_002516305.1| 2-oxoisovalerate dehydrogenase, putative [Ricinus communis] gi|223544535|gb|EEF46052.1| 2-oxoisovalerate dehydrogenase, putative [Ricinus communis] Length = 450 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 1/278 (0%) Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 IG+EA+ + +LT D ++ YRE G +L G + + +G KG+ H Sbjct: 141 IGEEAINIASAAALTIDDLVVPQYREPGVLLWRGFSLQEFANQCFSNKGDNCKGRQMPAH 200 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 S K+ ++ + +Q+ G A++ K D V FGDG +++G + + N AA Sbjct: 201 YGSKKHNYFTVASTIASQLPHAVGAAYSLKMDGRDACVVAYFGDGGSSEGDFHAALNFAA 260 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + VI++ NN +A+ T VS RG ++ + ++VDG D A+ + + A Sbjct: 261 VMEAPVIFICRNNGWAISTPVSDQFRSDGIVVRGQAYGVRSIRVDGNDALAMYSAVYAAR 320 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 PI+IE LTYR HS SD + YR+ +E+ + R DP+ + K + N W Sbjct: 321 EMAINEHRPILIEALTYRVGHHSTSDDSTKYRSVDEVEQWRLARDPVMRFLKWIESNGWW 380 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 S E+ ++RK + N ++ A+ ++P A+++SDI Sbjct: 381 SNEAESELRSSIRKQLLNVIQVAERVEKPPVADMFSDI 418 >gi|89095726|ref|ZP_01168620.1| hypothetical protein B14911_03314 [Bacillus sp. NRRL B-14911] gi|89089472|gb|EAR68579.1| hypothetical protein B14911_03314 [Bacillus sp. NRRL B-14911] Length = 668 Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 98/295 (33%), Positives = 149/295 (50%), Gaps = 13/295 (4%) Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 S Y+ M+ IR EE L+ G + G H IGQEA V + GD + + +R HG Sbjct: 21 SMYKKMITIRTLEETLLDLFSKGELFGTTHTSIGQEANAVASMAHIKNGDVVFSNHRCHG 80 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 H +A G +++AE+ GR G+ G+GGS H+ N FY +GI G V TG A A Sbjct: 81 HYIAYGAPVDQLIAEVMGRVTGVVGGRGGSQHI--CYNDFYT-NGIQGGIVGNATGAALA 137 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 NK +D I VV GDG +G VYES N A+LW++ +++++ENN+YA T+ + Sbjct: 138 NKLTGTDNIAVVFIGDGTLGEGLVYESMNFASLWDIPILFILENNRYAQ-TTPNELGISG 196 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + R SF I Q++ D + +K Y R + P + TYR HS D Sbjct: 197 SMLARPKSFGIEADQIESNDAVELYQVFEKRFDYVRNKRKPFFQIIDTYRTVPHSKGD-- 254 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++R + EI+ + DP+ ++ K S+ K + V I N+++ A+ Sbjct: 255 DFRDQAEIDAWKKK-DPV------IILGKNVSDETKKTVMAEVTSDIQNAIKEAK 302 >gi|253576335|ref|ZP_04853665.1| 3-methyl-2-oxobutanoate dehydrogenase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844228|gb|EES72246.1| 3-methyl-2-oxobutanoate dehydrogenase [Paenibacillus sp. oral taxon 786 str. D14] Length = 358 Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 95/310 (30%), Positives = 151/310 (48%), Gaps = 10/310 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYRE 111 + YR M+ R+F+E+ L G + F IGQE V +L E D + YR+ Sbjct: 41 IEMYRYMVTARKFDERNLLLQRAGKIN-FHVSGIGQETTQVAAAFALDRERDYFLPYYRD 99 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQVSLGTG 169 +G +LA G+ +++M + G + G G M H S + G V QV G Sbjct: 100 YGFVLAVGMSLTELMLSTFAKAGDPNSG-GRQMPGHFGSKRLRIVTGSSPVTTQVPHAVG 158 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +A A K ++ D + V FG+G++NQG +E N A + L VI++ ENNQYA+ V + Sbjct: 159 VALAAKMQKKDIVSYVTFGEGSSNQGDFHEGLNFAGVQKLPVIFLCENNQYAISVPVKKQ 218 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 R + PG++VDG D V + +A +GP +IE + YR HS Sbjct: 219 LG-GRVVDRAQGYGFPGVRVDGNDALEVYRVVKEARERAVRGEGPTLIEAMMYRLSPHST 277 Query: 290 SD-PANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINNSVEFA 347 SD YRT+EE+ E D I +++ L+ W+ E D + + ++++ + +VE A Sbjct: 278 SDNDLAYRTKEEVEE-NWKKDGIPKMKSYLIETGIWSEEQD-EALLRDIQQQLKEAVEAA 335 Query: 348 QSDKEPDPAE 357 + P P + Sbjct: 336 DNAPFPRPED 345 >gi|323488941|ref|ZP_08094178.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Planococcus donghaensis MPA1U2] gi|323397333|gb|EGA90142.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Planococcus donghaensis MPA1U2] Length = 334 Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 93/312 (29%), Positives = 144/312 (46%), Gaps = 5/312 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 E L Y ML+ RR +E+ L G + F C GQEA VG +L D + Sbjct: 10 LTNEDVLKMYETMLMARRVDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDNSKDYI 68 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 YR+ G +L G+ ++M + + S G+ H N G V Q+ Sbjct: 69 APYYRDIGVVLHFGMTPKELMLSAFAKAEDPNSGGRQMPGHFGQKSNRILTGSSPVTTQL 128 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G+A A K ++ D I G+G++NQG +E N A + L VI ++ENN+YA+ Sbjct: 129 PHAVGVALAGKMKKKDFITFTTLGEGSSNQGDFHEGMNFAGVHKLPVIIMVENNKYAISV 188 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 V R A N S R + + +PG+ +DG D V + +A R +GP +IE ++ R Sbjct: 189 PVERQLACKNVSDRAIGYGMPGVTIDGNDPIEVYKHVKEAADRARRGEGPSLIETVSERM 248 Query: 285 RGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D YR+ +E+ +S DPI L N ++ KEI + I+N + Sbjct: 249 TAHSSDDDHRQYRSADELAAQKST-DPILTFGAYLKENGVMNDELEKEINDRIMVIVNEA 307 Query: 344 VEFAQSDKEPDP 355 ++A+ +P Sbjct: 308 TDYAEEAPYAEP 319 >gi|254392373|ref|ZP_05007556.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|294813806|ref|ZP_06772449.1| Putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces clavuligerus ATCC 27064] gi|197706043|gb|EDY51855.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces clavuligerus ATCC 27064] gi|294326405|gb|EFG08048.1| Putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces clavuligerus ATCC 27064] Length = 375 Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 80/301 (26%), Positives = 139/301 (46%), Gaps = 12/301 (3%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RRF +A L G + + GQEA V ++L E D + +YR+ + G+D Sbjct: 60 RRFNTQATALTRQGRLAVYPS-STGQEACQVAAALALEERDWLFPSYRDTLAAVTRGIDP 118 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 +++ L G + ST + Q+ G+A A + R D + Sbjct: 119 VQVLTLLRGDWHTGYDPREHRTAPLSTP---------LATQLPHAVGLAHAARLRGDDVV 169 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 + GDG ++G +E+ N AA+W V+++++NN +A+ +++ +A + + + V + Sbjct: 170 ALALVGDGGTSEGDFHEALNFAAVWQAPVVFLVQNNGFAISVPLAKQTAAPSLAHKAVGY 229 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEI 301 +PG VDG D AV + AVA R GP ++E +TYR H+ +D A YR E+ Sbjct: 230 GMPGRLVDGNDAPAVHRVLSDAVARARRGGGPTLVEAVTYRLEAHTNADDATRYREEPEV 289 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 R+ HDP+ V + L E + + + + E +D E DP +L+ Sbjct: 290 EAWRA-HDPVVLVERELTARGLLDEQRRRSVTEDAEAMAARLRERMNADAELDPMDLFGQ 348 Query: 362 I 362 + Sbjct: 349 V 349 >gi|193248360|dbj|BAG50248.1| pyruvate dehydrogenase complex E1 component alpha subunit [Amphibacillus xylanus] Length = 360 Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 86/278 (30%), Positives = 137/278 (49%), Gaps = 14/278 (5%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA +G + +L + D ++ YR+ ++ Sbjct: 45 MVYTRILDQRSIALNRQGRLG-FYAPTAGQEASQLGTQFALEKDDFILPGYRDVPQLIWH 103 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ K S+G M N F I+GAQ G+A K R Sbjct: 104 GLPLYKAFL--------FSRGHYVGNQMPEGVNAF-SPQIIIGAQYVQAAGVALGMKKRN 154 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + + + GDG +QG YE N A + I+V++NN++A+ T V + +A +++ Sbjct: 155 KNAVAITYTGDGGTSQGDFYEGINFAGAYKAPAIFVVQNNRFAISTPVEKQTAAKTLAQK 214 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ I G+QVDGMD+ AV A +A +GP +IE LTYRY H+M+ DP YR Sbjct: 215 AVAAGIEGIQVDGMDVLAVYAATKEARERAVRGEGPTLIETLTYRYGPHTMAGDDPTRYR 274 Query: 297 TREEINEMRSNHDPIEQVRKRL-LHNKWASEGDLKEIE 333 T+ +++ DP+ + RK L W+ E + K IE Sbjct: 275 TK-DLDSEWEKKDPLVRFRKFLEAKGLWSEEEENKVIE 311 >gi|326442226|ref|ZP_08216960.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces clavuligerus ATCC 27064] Length = 372 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 80/301 (26%), Positives = 139/301 (46%), Gaps = 12/301 (3%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RRF +A L G + + GQEA V ++L E D + +YR+ + G+D Sbjct: 57 RRFNTQATALTRQGRLAVYPS-STGQEACQVAAALALEERDWLFPSYRDTLAAVTRGIDP 115 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 +++ L G + ST + Q+ G+A A + R D + Sbjct: 116 VQVLTLLRGDWHTGYDPREHRTAPLSTP---------LATQLPHAVGLAHAARLRGDDVV 166 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 + GDG ++G +E+ N AA+W V+++++NN +A+ +++ +A + + + V + Sbjct: 167 ALALVGDGGTSEGDFHEALNFAAVWQAPVVFLVQNNGFAISVPLAKQTAAPSLAHKAVGY 226 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEI 301 +PG VDG D AV + AVA R GP ++E +TYR H+ +D A YR E+ Sbjct: 227 GMPGRLVDGNDAPAVHRVLSDAVARARRGGGPTLVEAVTYRLEAHTNADDATRYREEPEV 286 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 R+ HDP+ V + L E + + + + E +D E DP +L+ Sbjct: 287 EAWRA-HDPVVLVERELTARGLLDEQRRRSVTEDAEAMAARLRERMNADAELDPMDLFGQ 345 Query: 362 I 362 + Sbjct: 346 V 346 >gi|15607983|ref|NP_215358.1| dehydrogenase [Mycobacterium tuberculosis H37Rv] gi|15840257|ref|NP_335294.1| dehydrogenase E1 component [Mycobacterium tuberculosis CDC1551] gi|148660620|ref|YP_001282143.1| dehydrogenase E1 component [Mycobacterium tuberculosis H37Ra] gi|148822051|ref|YP_001286805.1| dehydrogenase [Mycobacterium tuberculosis F11] gi|167967563|ref|ZP_02549840.1| hypothetical dehydrogenase [Mycobacterium tuberculosis H37Ra] gi|215402637|ref|ZP_03414818.1| dehydrogenase [Mycobacterium tuberculosis 02_1987] gi|215410427|ref|ZP_03419235.1| dehydrogenase [Mycobacterium tuberculosis 94_M4241A] gi|215426106|ref|ZP_03424025.1| dehydrogenase [Mycobacterium tuberculosis T92] gi|215429699|ref|ZP_03427618.1| dehydrogenase [Mycobacterium tuberculosis EAS054] gi|218752508|ref|ZP_03531304.1| dehydrogenase [Mycobacterium tuberculosis GM 1503] gi|219556706|ref|ZP_03535782.1| dehydrogenase [Mycobacterium tuberculosis T17] gi|253800135|ref|YP_003033136.1| dehydrogenase [Mycobacterium tuberculosis KZN 1435] gi|254231153|ref|ZP_04924480.1| hypothetical protein TBCG_00834 [Mycobacterium tuberculosis C] gi|254363779|ref|ZP_04979825.1| hypothetical dehydrogenase [Mycobacterium tuberculosis str. Haarlem] gi|254549819|ref|ZP_05140266.1| dehydrogenase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185738|ref|ZP_05763212.1| dehydrogenase [Mycobacterium tuberculosis CPHL_A] gi|260199863|ref|ZP_05767354.1| dehydrogenase [Mycobacterium tuberculosis T46] gi|260204040|ref|ZP_05771531.1| dehydrogenase [Mycobacterium tuberculosis K85] gi|289442252|ref|ZP_06431996.1| dehydrogenase [Mycobacterium tuberculosis T46] gi|289446408|ref|ZP_06436152.1| dehydrogenase [Mycobacterium tuberculosis CPHL_A] gi|289555376|ref|ZP_06444586.1| dehydrogenase [Mycobacterium tuberculosis KZN 605] gi|289568805|ref|ZP_06449032.1| dehydrogenase [Mycobacterium tuberculosis T17] gi|289573465|ref|ZP_06453692.1| dehydrogenase [Mycobacterium tuberculosis K85] gi|289744569|ref|ZP_06503947.1| dehydrogenase E1 component [Mycobacterium tuberculosis 02_1987] gi|289749362|ref|ZP_06508740.1| dehydrogenase [Mycobacterium tuberculosis T92] gi|289752897|ref|ZP_06512275.1| dehydrogenase [Mycobacterium tuberculosis EAS054] gi|289760975|ref|ZP_06520353.1| pyruvate/2-oxoglutarate dehydrogenase complex [Mycobacterium tuberculosis GM 1503] gi|294996324|ref|ZP_06802015.1| dehydrogenase [Mycobacterium tuberculosis 210] gi|297633360|ref|ZP_06951140.1| dehydrogenase [Mycobacterium tuberculosis KZN 4207] gi|297730345|ref|ZP_06959463.1| dehydrogenase [Mycobacterium tuberculosis KZN R506] gi|298524336|ref|ZP_07011745.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306774967|ref|ZP_07413304.1| dehydrogenase [Mycobacterium tuberculosis SUMu001] gi|306782119|ref|ZP_07420456.1| dehydrogenase [Mycobacterium tuberculosis SUMu002] gi|306783511|ref|ZP_07421833.1| dehydrogenase [Mycobacterium tuberculosis SUMu003] gi|306787875|ref|ZP_07426197.1| dehydrogenase [Mycobacterium tuberculosis SUMu004] gi|306792216|ref|ZP_07430518.1| dehydrogenase [Mycobacterium tuberculosis SUMu005] gi|306796614|ref|ZP_07434916.1| dehydrogenase [Mycobacterium tuberculosis SUMu006] gi|306802501|ref|ZP_07439169.1| dehydrogenase [Mycobacterium tuberculosis SUMu008] gi|306806683|ref|ZP_07443351.1| dehydrogenase [Mycobacterium tuberculosis SUMu007] gi|306966880|ref|ZP_07479541.1| dehydrogenase [Mycobacterium tuberculosis SUMu009] gi|306971074|ref|ZP_07483735.1| dehydrogenase [Mycobacterium tuberculosis SUMu010] gi|307078802|ref|ZP_07487972.1| dehydrogenase [Mycobacterium tuberculosis SUMu011] gi|313657671|ref|ZP_07814551.1| dehydrogenase [Mycobacterium tuberculosis KZN V2475] gi|2916902|emb|CAA17649.1| PROBABLE DEHYDROGENASE [Mycobacterium tuberculosis H37Rv] gi|13880416|gb|AAK45108.1| dehydrogenase E1 component [Mycobacterium tuberculosis CDC1551] gi|124600212|gb|EAY59222.1| hypothetical protein TBCG_00834 [Mycobacterium tuberculosis C] gi|134149293|gb|EBA41338.1| hypothetical dehydrogenase [Mycobacterium tuberculosis str. Haarlem] gi|148504772|gb|ABQ72581.1| dehydrogenase E1 component [Mycobacterium tuberculosis H37Ra] gi|148720578|gb|ABR05203.1| hypothetical dehydrogenase [Mycobacterium tuberculosis F11] gi|253321638|gb|ACT26241.1| dehydrogenase [Mycobacterium tuberculosis KZN 1435] gi|289415171|gb|EFD12411.1| dehydrogenase [Mycobacterium tuberculosis T46] gi|289419366|gb|EFD16567.1| dehydrogenase [Mycobacterium tuberculosis CPHL_A] gi|289440008|gb|EFD22501.1| dehydrogenase [Mycobacterium tuberculosis KZN 605] gi|289537896|gb|EFD42474.1| dehydrogenase [Mycobacterium tuberculosis K85] gi|289542559|gb|EFD46207.1| dehydrogenase [Mycobacterium tuberculosis T17] gi|289685097|gb|EFD52585.1| dehydrogenase E1 component [Mycobacterium tuberculosis 02_1987] gi|289689949|gb|EFD57378.1| dehydrogenase [Mycobacterium tuberculosis T92] gi|289693484|gb|EFD60913.1| dehydrogenase [Mycobacterium tuberculosis EAS054] gi|289708481|gb|EFD72497.1| pyruvate/2-oxoglutarate dehydrogenase complex [Mycobacterium tuberculosis GM 1503] gi|298494130|gb|EFI29424.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308216463|gb|EFO75862.1| dehydrogenase [Mycobacterium tuberculosis SUMu001] gi|308325198|gb|EFP14049.1| dehydrogenase [Mycobacterium tuberculosis SUMu002] gi|308331674|gb|EFP20525.1| dehydrogenase [Mycobacterium tuberculosis SUMu003] gi|308335474|gb|EFP24325.1| dehydrogenase [Mycobacterium tuberculosis SUMu004] gi|308339272|gb|EFP28123.1| dehydrogenase [Mycobacterium tuberculosis SUMu005] gi|308342949|gb|EFP31800.1| dehydrogenase [Mycobacterium tuberculosis SUMu006] gi|308346833|gb|EFP35684.1| dehydrogenase [Mycobacterium tuberculosis SUMu007] gi|308350750|gb|EFP39601.1| dehydrogenase [Mycobacterium tuberculosis SUMu008] gi|308355411|gb|EFP44262.1| dehydrogenase [Mycobacterium tuberculosis SUMu009] gi|308359363|gb|EFP48214.1| dehydrogenase [Mycobacterium tuberculosis SUMu010] gi|308363270|gb|EFP52121.1| dehydrogenase [Mycobacterium tuberculosis SUMu011] gi|323720706|gb|EGB29782.1| dehydrogenase [Mycobacterium tuberculosis CDC1551A] gi|326904937|gb|EGE51870.1| dehydrogenase [Mycobacterium tuberculosis W-148] gi|328459873|gb|AEB05296.1| dehydrogenase [Mycobacterium tuberculosis KZN 4207] Length = 334 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 6/315 (1%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG ++ +EL YR M ++R + QL G++ G GQEAV VG +L Sbjct: 6 EGLAAFVVDQLEEL--YRRMWVLRLLDMALEQLRIEGLINGPLQGGFGQEAVSVGAAAAL 63 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD +IT +R H + ++A++ G G +G H+ + G + Sbjct: 64 GEGDVIITTHRPHAQHVGTDAPLGPVIADMLGATAGDLEGADEDAHIADPRAGLPAAIRV 123 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V L G A+A R + ++ + D + E+ ++AA+W L V+ ++EN + Sbjct: 124 VKQSPLLAIGHAYALWLRDTGRVTLCVTQDCDVDADAFNEAADLAAVWQLPVVILVENIR 183 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 A+ + R + + +R V++ +PG+ VDG D+ AV+ + AV RA GP +++ Sbjct: 184 GALSVHLDRYTHEPRVYRRAVAYGMPGVSVDGNDVEAVRDCVANAVVRARAGGGPTLVQA 243 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +TYR S SD YR ++ DP+ R+RL+ + G L E E + Sbjct: 244 ITYRTTDFSGSDRGGYR---DLAGSEQFLDPLIFARRRLIAAG-TTRGRLDEQERAACQQ 299 Query: 340 INNSVEFAQSDKEPD 354 + ++V FA++ P+ Sbjct: 300 VADAVAFAKARARPN 314 >gi|238062017|ref|ZP_04606726.1| pyruvate dehydrogenase [Micromonospora sp. ATCC 39149] gi|237883828|gb|EEP72656.1| pyruvate dehydrogenase [Micromonospora sp. ATCC 39149] Length = 394 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 97/324 (29%), Positives = 153/324 (47%), Gaps = 20/324 (6%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +F E+ YR ++L+RR + +A L G +G + L +GQEA VG +L D Sbjct: 57 DFTDEEYRGLYRDLVLVRRLDAEATALQRQGELGLWASL-LGQEAAQVGSGRALRSQDMA 115 Query: 106 ITAYREHGHILACGVDASKIMAELTG-RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 YREHG + G+D + G QGG + +M++ ++GAQ Sbjct: 116 FPTYREHGVLYCRGIDPIMPLGLFRGVDQGGWDPNEF-RFNMYTI---------VIGAQT 165 Query: 165 SLGTGIAFA----NKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG A K D V+ FGDGA +QG V E+F A+++N +++ +NNQ Sbjct: 166 LHATGYAMGVHMDGKTGGDDGEAVIAYFGDGATSQGDVNEAFVWASVFNAPLVFFCQNNQ 225 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ + R + + +R F PG++VDG D+ A A A+ R +GP +IE Sbjct: 226 YAISEPLERQT-RVPLYQRARGFGFPGVRVDGNDVLASYAVTRHALDNARHGQGPSLIEA 284 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYR H+ S DP YR E+ ++ DPI +++ L K A E E++ R Sbjct: 285 YTYRMGAHTTSDDPTRYRIASEVEAWQAK-DPITRMKAFLEKQKIADESFFAEVDEQARA 343 Query: 339 IINNSVEFAQSDKEPDPAELYSDI 362 + E + P+P ++ + Sbjct: 344 ESVHLRERVLAMPNPEPVTMFDHV 367 >gi|184155616|ref|YP_001843956.1| pyruvate dehydrogenase complex E1 component alpha subunit [Lactobacillus fermentum IFO 3956] gi|183226960|dbj|BAG27476.1| pyruvate dehydrogenase complex E1 component alpha subunit [Lactobacillus fermentum IFO 3956] Length = 323 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 91/310 (29%), Positives = 147/310 (47%), Gaps = 17/310 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 ++ M+ R ++ +L G +G F G+EA +G ++T+ D ++ AYR+ + Sbjct: 5 FKQMIWSRLVGDQTAKLSRQGRLGFFAPTA-GEEASQMGSNFAMTKDDFLLGAYRDVPQL 63 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G+ +K SKG + N I+GAQ + G+A K Sbjct: 64 IKHGLSLAKGFM--------WSKGHYNANDYPEELNAL-PPQIIIGAQYAQTAGVALGIK 114 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 K+ GDG +QG YE N A + ++ ++NN YA+ +A Sbjct: 115 LNGDKKVAYTYTGDGGTSQGDFYEGINFAGAYQAPAVFFVQNNGYAISVPRKLQTAAPTL 174 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPA 293 +++GV+ IP + VDGMD AV A +A Y GP+IIE LTYRY H++S DP Sbjct: 175 AQKGVAAGIPSIVVDGMDALAVYAAAKQARDYAVEGNGPVIIETLTYRYGPHTLSGDDPT 234 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRT+EE +E + DP+ ++RK L + + V K I+++++ +S Sbjct: 235 RYRTKEEEDEWHAK-DPLVRMRKFLTDKGLWDDAKEEAYNAEVAKEIDDAIKEVES---- 289 Query: 354 DPAELYSDIL 363 PA+ SD L Sbjct: 290 QPAQKASDFL 299 >gi|145592675|ref|YP_001156972.1| pyruvate dehydrogenase (acetyl-transferring) [Salinispora tropica CNB-440] gi|145302012|gb|ABP52594.1| Pyruvate dehydrogenase (acetyl-transferring) [Salinispora tropica CNB-440] Length = 391 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 94/324 (29%), Positives = 155/324 (47%), Gaps = 20/324 (6%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +F E+ YR ++L+R+ + +A L G +G + L +GQEA VG +L D Sbjct: 54 DFTDEEYRGFYRDLVLVRKLDAEATALQRQGELGLWASL-LGQEAAQVGSGRALRTQDMA 112 Query: 106 ITAYREHGHILACGVDASKIMAELTG-RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 YREHG + G+D + G QGG + +M++ ++GAQ Sbjct: 113 FPTYREHGVLYCRGIDPIMPLGLFRGVDQGGWDPNEF-KFNMYTI---------VIGAQA 162 Query: 165 SLGTGIAFA----NKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG A K + V+ FGDGA +QG V E+F A+++N +++ +NNQ Sbjct: 163 LHATGYAMGITMDGKTGTDEGEAVIAYFGDGATSQGDVNEAFVWASVFNAPMVFFCQNNQ 222 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ + R + + +R F PG++VDG D+ A A A+ R +GP +IE Sbjct: 223 YAISEPLERQT-RIPLYRRAAGFGFPGLRVDGNDVLATYAVTRHALDNARHGQGPSLIEA 281 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYR H+ S DP YR E+ ++ DPI +++ L K A +G E++ ++ Sbjct: 282 YTYRMGAHTTSDDPTRYRIASEVEAWQAK-DPIARMKTFLEKQKIADDGFFAEVDEQAKR 340 Query: 339 IINNSVEFAQSDKEPDPAELYSDI 362 + E P+P+ ++ + Sbjct: 341 ESVHLRERVLEMPNPEPSSMFDHV 364 >gi|77360573|ref|YP_340148.1| 2-oxoisovalerate dehydrogenase alpha subunit (branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) (BCKDE1A) [Pseudoalteromonas haloplanktis TAC125] gi|76875484|emb|CAI86705.1| 2-oxoisovalerate dehydrogenase alpha subunit (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) (BCKDE1A) [Pseudoalteromonas haloplanktis TAC125] Length = 404 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 96/349 (27%), Positives = 159/349 (45%), Gaps = 19/349 (5%) Query: 28 TSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIG 87 T S+ D G + +K + Y M IR +E+ G + F C+G Sbjct: 27 TLSILTEDGEIHPGATAPDISKHTAIKLYETMRFIRLLDERMQGAQRQGRIS-FYMQCLG 85 Query: 88 QEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMF 147 +EA + +L + D ++ YRE + G + M ++ + + KG+ +H Sbjct: 86 EEAAVTASAAALDQNDMIMAQYREQAALHYRGFTLDQFMNQMFSNELDLGKGRQMPIHYG 145 Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD-----------KICVVCFGDGAANQGQ 196 S + +G Q+ TG A+ K + D I + FG+GAA++G Sbjct: 146 SKALNYMTISSPLGTQIPQATGYAYGQKIKHIDAKTGELASTIDNITICYFGEGAASEGD 205 Query: 197 VYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA 256 + N+AA+ VI+ NN YA+ T + RGV + I ++VDG D A Sbjct: 206 FHAGVNMAAVHQAPVIFFARNNGYAISTPADEQFKGDGIASRGVGYGIKTIRVDGTDALA 265 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHD--PIEQ 313 V A KA + PI+IE + YR HS S DP+ YR+++E +NH PI++ Sbjct: 266 VYAATKKAREIAVSTGEPILIESIAYRLGAHSTSDDPSGYRSKDE----EANHQVCPIDK 321 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 RK L+ W +E D + + ++R+ I +++ A+ +P EL SD+ Sbjct: 322 FRKWLIKQDWLNEADDVKAKESIREEILAALKRAEVVAKPALEELISDV 370 >gi|117927244|ref|YP_871795.1| pyruvate dehydrogenase (acetyl-transferring) [Acidothermus cellulolyticus 11B] gi|117647707|gb|ABK51809.1| Pyruvate dehydrogenase (acetyl-transferring) [Acidothermus cellulolyticus 11B] Length = 372 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 90/309 (29%), Positives = 141/309 (45%), Gaps = 14/309 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+ +RRF+ +A L G +G + + +GQEA +G +L D + YREHG Sbjct: 51 YRDMVALRRFDVEATTLQRQGELGIWAQV-LGQEAAQIGSARALRPTDMVFPTYREHGVA 109 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA-N 174 G+ I+ G G + ++ ++GA G A A Sbjct: 110 WCRGIPPEDILQLFRGINFGGWDPAAYHVAPYTI---------VIGAHALHAVGYAMALQ 160 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + +D I + FGDGA ++G V E+F AA + VI+ ++NNQ+A+ R S Sbjct: 161 REPGNDSIAIAYFGDGATSEGDVNEAFVFAASYRAPVIFFVQNNQWAISVPEIRQS-PIP 219 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 +R F PG++VDG D+ A A A A+ RA GP +IE TYR H+ S DP Sbjct: 220 LYQRAAGFGFPGVRVDGNDVLACLAVTRAAAAHVRAGNGPYLIEAFTYRMGAHTTSDDPT 279 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR E+ E DPIE+V+ L + A +++ ++ + +P Sbjct: 280 RYRLAAEV-EAWKLRDPIERVKAYLSRSGAADADFFTDVDTEAERLAERVRAACVTMPDP 338 Query: 354 DPAELYSDI 362 P ++ + Sbjct: 339 GPLTMFDHV 347 >gi|304407031|ref|ZP_07388685.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Paenibacillus curdlanolyticus YK9] gi|304344018|gb|EFM09858.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Paenibacillus curdlanolyticus YK9] Length = 342 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 95/313 (30%), Positives = 150/313 (47%), Gaps = 8/313 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 E+ + YR M+L R+F+E+ L G + F IGQE V +L D Sbjct: 18 LTDEKAIDMYRTMVLARKFDERVLLLQRAGKIN-FHVSGIGQEPAQVAAGFALDRDVDYF 76 Query: 106 ITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR++G +L+ G+ ++M + + + S G+ H S + G V QV Sbjct: 77 LPYYRDYGFVLSVGMTVRELMLSVFAKAEDPNSGGRQMPGHFGSKRLRIVTGSSPVTTQV 136 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 GIA A K R + +V FG+G++NQG +E N A + L VI + ENNQYA+ Sbjct: 137 PHAVGIALAAKMRNEAFVSLVTFGEGSSNQGDFHEGCNFAGVHKLPVIIMCENNQYAISV 196 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + R + PG +VDG D V + +A +GP +IE + YR Sbjct: 197 PIHKQLG-GRIVDRAAGYGFPGFRVDGNDPLEVYRVVKEARERGLNGEGPTLIEAMMYRL 255 Query: 285 RGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS SD YRT+EE++E R D I + ++ LL SE +++ ++R +++ + Sbjct: 256 SPHSTSDNDLAYRTKEEVDENREK-DGIPKFKQYLLEAGIWSEQQEEQLLADIRVMLDEA 314 Query: 344 VEFAQSDKEPDPA 356 +A DK P P Sbjct: 315 TTYA--DKAPFPT 325 >gi|260789498|ref|XP_002589783.1| hypothetical protein BRAFLDRAFT_90463 [Branchiostoma floridae] gi|229274966|gb|EEN45794.1| hypothetical protein BRAFLDRAFT_90463 [Branchiostoma floridae] Length = 145 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 64/129 (49%), Positives = 88/129 (68%), Gaps = 3/129 (2%) Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A LW+L VI+V ENN Y MGT+V RASA T++ RG +PG++ DGMD+ AV+ Sbjct: 1 MAKLWDLPVIFVCENNGYGMGTAVERASASTDYYTRGDY--VPGIRADGMDVLAVREATR 58 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHN 321 A +CR+ KGP+++E+ TYRY GHSMSDP YR REEI EMR DPI +R++L+ Sbjct: 59 FAAEWCRSGKGPMLLEVATYRYHGHSMSDPGTTYRPREEIQEMRKTRDPITGLREKLISA 118 Query: 322 KWASEGDLK 330 A+ ++K Sbjct: 119 NIATAEEMK 127 >gi|121636766|ref|YP_976989.1| putative dehydrogenase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989237|ref|YP_002643924.1| putative dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|121492413|emb|CAL70881.1| Probable dehydrogenase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772350|dbj|BAH25156.1| putative dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] Length = 334 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 6/315 (1%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG ++ +EL YR M ++R + QL G++ G GQEAV VG +L Sbjct: 6 EGLAAFVVDQLEEL--YRRMWVLRLLDMALEQLRIEGLINGPLQGGFGQEAVSVGAAAAL 63 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD +IT +R H + ++A++ G G +G H+ + G + Sbjct: 64 GEGDVIITTHRPHAQHVGTDAPLGPVIADMLGATAGDLEGADEDAHIADPRAGLPAAIRV 123 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V L G A+A R + ++ + D + E+ ++AA+W L V+ ++EN + Sbjct: 124 VKQSPLLAIGHAYALWLRDTGRVTLCVTQDCDVDADAFNEAADLAAVWQLPVVILVENIR 183 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 A+ + R + + +R V++ +PG+ VDG D+ AV+ + AV RA GP +++ Sbjct: 184 GALSVHLGRYTHEPRVYRRAVAYGMPGVSVDGNDVEAVRDCVANAVVRARAGGGPTLVQA 243 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +TYR S SD YR ++ DP+ R+RL+ + G L E E + Sbjct: 244 ITYRTTDFSGSDRGGYR---DLAGSEQFLDPLIFARRRLIAAG-TTRGRLDEQERAACQQ 299 Query: 340 INNSVEFAQSDKEPD 354 + ++V FA++ P+ Sbjct: 300 VADAVAFAKARARPN 314 >gi|328951992|ref|YP_004369326.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Desulfobacca acetoxidans DSM 11109] gi|328452316|gb|AEB08145.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Desulfobacca acetoxidans DSM 11109] Length = 374 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 81/270 (30%), Positives = 135/270 (50%), Gaps = 12/270 (4%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E L Y M+++R +++A L G +G + +GQEA +G +L GD + Sbjct: 41 LTDEMVLELYDKMVMLRAADQQALTLQRAGRMGTYPP-TLGQEAANIGSAAALETGDWLT 99 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 ++RE G ++ GV I G + G +G ++ V Q Sbjct: 100 PSFRETGAMILRGVPLKLIYLYWMGSEWGSHFPEGVNVLPICAP---------VSTQTLH 150 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+A+A K + + ++ FGDGA ++G +E+ N A ++ ++ +NNQY++ Sbjct: 151 GVGLAWAAKLKGERAVNLIYFGDGATSKGDFHEAMNFAGVFFTPNVFFCQNNQYSISVPR 210 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S+ +A +++ + + PG+ VDG D+ AV A AV+ R GPI+IE TYR Sbjct: 211 SQQTATPTLAQKAIGYGFPGLMVDGNDLLAVYAATQAAVSRAREGGGPILIEAQTYRLGP 270 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVR 315 H+ + DP YRT +E+ E R DP+ +VR Sbjct: 271 HTTADDPNRYRTPDEVKE-REPFDPLRRVR 299 >gi|73662547|ref|YP_301328.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495062|dbj|BAE18383.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 332 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 97/323 (30%), Positives = 147/323 (45%), Gaps = 8/323 (2%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G E S+ + Y+ M L R+ +E+ L G + F C GQEA +GM ++ Sbjct: 8 GLEASDLQ-----TMYKWMDLGRKIDERMWLLNRAGKIP-FVISCQGQEATQIGMAYAMR 61 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGI 159 EGD YR+ + G+ A M G++ I S GK H + G Sbjct: 62 EGDISSPYYRDLAFVTYMGMTALDSMLAAFGKRDDINSGGKQMPSHFGKREKGILSQSSP 121 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VG Q+ G A A K + I + G+G++NQG +E N A + NL I VIENN+ Sbjct: 122 VGTQIVHAVGAALALKMDKKPNIAMATVGEGSSNQGDFHEGLNFAGVHNLPFICVIENNK 181 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ S S R + + + G VDG D A+ M +A +G +IE Sbjct: 182 YAISVPDSLQYGAEKLSDRAIGYGMHGEHVDGNDPIAMYKVMKEARERALNGEGSTLIEA 241 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 + R HS D YRT+EE + ++S D + + LL E L++IE ++I Sbjct: 242 MCTRMTAHSSDDDDKYRTQEERDGLKS-LDCNLKFKTFLLEEGIIDEAWLEKIETEHKEI 300 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 +N + + A+ P P E Y+ + Sbjct: 301 VNQATKEAEKAPYPSPEETYTHV 323 >gi|69249708|ref|ZP_00605035.1| Pyruvate dehydrogenase (lipoamide) [Enterococcus faecium DO] gi|257878105|ref|ZP_05657758.1| pyruvate dehydrogenase [Enterococcus faecium 1,230,933] gi|257881109|ref|ZP_05660762.1| pyruvate dehydrogenase [Enterococcus faecium 1,231,502] gi|257884772|ref|ZP_05664425.1| pyruvate dehydrogenase [Enterococcus faecium 1,231,501] gi|257889696|ref|ZP_05669349.1| pyruvate dehydrogenase [Enterococcus faecium 1,231,410] gi|257892367|ref|ZP_05672020.1| pyruvate dehydrogenase [Enterococcus faecium 1,231,408] gi|258616398|ref|ZP_05714168.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Enterococcus faecium DO] gi|260559154|ref|ZP_05831340.1| pyruvate dehydrogenase [Enterococcus faecium C68] gi|261207689|ref|ZP_05922374.1| pyruvate dehydrogenase [Enterococcus faecium TC 6] gi|289565807|ref|ZP_06446250.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Enterococcus faecium D344SRF] gi|293563714|ref|ZP_06678154.1| pyruvate dehydrogenase [Enterococcus faecium E1162] gi|293569387|ref|ZP_06680684.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Enterococcus faecium E1071] gi|294615883|ref|ZP_06695725.1| pyruvate dehydrogenase [Enterococcus faecium E1636] gi|294617440|ref|ZP_06697073.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Enterococcus faecium E1679] gi|294623484|ref|ZP_06702332.1| pyruvate dehydrogenase [Enterococcus faecium U0317] gi|314938759|ref|ZP_07846034.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecium TX0133a04] gi|314941139|ref|ZP_07848036.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecium TX0133C] gi|314947910|ref|ZP_07851315.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecium TX0082] gi|314953037|ref|ZP_07855996.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecium TX0133A] gi|314993334|ref|ZP_07858705.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecium TX0133B] gi|314997603|ref|ZP_07862534.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecium TX0133a01] gi|68194095|gb|EAN08637.1| Pyruvate dehydrogenase (lipoamide) [Enterococcus faecium DO] gi|257812333|gb|EEV41091.1| pyruvate dehydrogenase [Enterococcus faecium 1,230,933] gi|257816767|gb|EEV44095.1| pyruvate dehydrogenase [Enterococcus faecium 1,231,502] gi|257820610|gb|EEV47758.1| pyruvate dehydrogenase [Enterococcus faecium 1,231,501] gi|257826056|gb|EEV52682.1| pyruvate dehydrogenase [Enterococcus faecium 1,231,410] gi|257828746|gb|EEV55353.1| pyruvate dehydrogenase [Enterococcus faecium 1,231,408] gi|260074911|gb|EEW63227.1| pyruvate dehydrogenase [Enterococcus faecium C68] gi|260078072|gb|EEW65778.1| pyruvate dehydrogenase [Enterococcus faecium TC 6] gi|289162445|gb|EFD10302.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Enterococcus faecium D344SRF] gi|291587913|gb|EFF19764.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Enterococcus faecium E1071] gi|291591269|gb|EFF22936.1| pyruvate dehydrogenase [Enterococcus faecium E1636] gi|291596294|gb|EFF27554.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Enterococcus faecium E1679] gi|291597078|gb|EFF28281.1| pyruvate dehydrogenase [Enterococcus faecium U0317] gi|291604292|gb|EFF33786.1| pyruvate dehydrogenase [Enterococcus faecium E1162] gi|313588320|gb|EFR67165.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecium TX0133a01] gi|313592236|gb|EFR71081.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecium TX0133B] gi|313594839|gb|EFR73684.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecium TX0133A] gi|313599999|gb|EFR78842.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecium TX0133C] gi|313641972|gb|EFS06552.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecium TX0133a04] gi|313645679|gb|EFS10259.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecium TX0082] Length = 369 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 17/298 (5%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + + + D ++ YR+ ++ Sbjct: 54 MVWSRVLDQRSTALNRQGRLGFFAPTA-GQEASQLASAYAFDKEDVLLPGYRDVPQLVKH 112 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ S+ G G S + + I+GAQ G+A K R Sbjct: 113 GLPLSQAFLWSRGHAAGNS---------YPEELKALPPQIIIGAQYVQAAGVALGLKKRN 163 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + GDG ++QG YE+ N A ++ N ++ I+NN YA+ T + +A +++ Sbjct: 164 KKNVVFTYTGDGGSSQGDFYEAINFAGAYHANAVFYIQNNGYAISTPREKQTAAKTLAQK 223 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ IPG+QVDGMD AV A + + GP++IE LTYRY H++S DP YR Sbjct: 224 AVAAGIPGIQVDGMDPLAVYTVSKMAREWAISGNGPVLIETLTYRYGPHTLSGDDPTRYR 283 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 T++ ++ + DP+ + RK L W+ E + + IE +I A++DK P Sbjct: 284 TKDTDDDWQKK-DPLIRFRKYLTEKGLWSEEKEEQVIEATKEEI---KAAIAEADKVP 337 >gi|224476626|ref|YP_002634232.1| putative branched-chain alpha-keto acid dehydrogenase E1 component alpha chain [Staphylococcus carnosus subsp. carnosus TM300] gi|222421233|emb|CAL28047.1| putative branched-chain alpha-keto acid dehydrogenase E1 component alpha chain [Staphylococcus carnosus subsp. carnosus TM300] Length = 330 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 95/315 (30%), Positives = 141/315 (44%), Gaps = 3/315 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E S Y+ M L R+ +E+ L G + F C GQEA +GM ++ +GD Sbjct: 9 LTEEDLKSMYKWMDLGRKLDERMWLLNRAGKIP-FVISCQGQEAAQIGMAFAMEKGDVSA 67 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 YR+ I G+ ++ M G++ I S GK H + VG QV Sbjct: 68 PYYRDLALITYLGITPTETMMSAFGKRDDINSAGKQMPSHYSKKEVDILSQSSPVGTQVL 127 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G G A A K + I + G+G +NQG +E N A + L I VIENN+YA+ Sbjct: 128 QGVGAALALKMDKKPNIAMATLGEGTSNQGDFHEGLNFAGVQKLPFICVIENNEYAISVP 187 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + A S R + + I G +VDG D A+ M A +G ++E + R Sbjct: 188 TNLQYAAEKLSDRALGYGIHGERVDGNDPIAMYKAMHDARERALNGEGSTLLEAMCTRMT 247 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HS D YR+ EI E + D + + LL E L EIE + I+ + + Sbjct: 248 AHSSDDDDKYRSA-EIREGLKSQDCNVKFKAHLLELGIIDENWLTEIEKENKSIVQKATK 306 Query: 346 FAQSDKEPDPAELYS 360 A++ PDP+E Y+ Sbjct: 307 EAEASPYPDPSETYT 321 >gi|290977327|ref|XP_002671389.1| predicted protein [Naegleria gruberi] gi|284084958|gb|EFC38645.1| predicted protein [Naegleria gruberi] Length = 432 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 90/328 (27%), Positives = 152/328 (46%), Gaps = 8/328 (2%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG--GFCHLCIGQEAVIVGMKM 97 + F+ ++ E ++ Y+ M+ R E LY G F G+EA+ +G Sbjct: 81 KAFKEIDYTNEDLVNMYKTMI---RLETMDDILYNAQRQGRVSFYMTNYGEEALQIGSAS 137 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +L+ D + YRE G ++ G + + KG+ +H S + F Sbjct: 138 ALSRDDTIFAQYREAGVLMHRGFTLDNFLNQCFSTIEDFGKGRQMPVHYGSKELNFQTIS 197 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + Q+ G + + + + +CV FG+GAA++G + + N A+ N I++ N Sbjct: 198 SPLATQIPQAAGAGYVYRIQGKENVCVCYFGEGAASEGDFHAALNFASTLNCQTIFICRN 257 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N YA+ T RG+ + IP ++VDG D+ A KA KGP++I Sbjct: 258 NGYAISTPTRDQYHGDGIVARGIGYGIPSIRVDGNDLFASYLATKKARQLSIESKGPVLI 317 Query: 278 EMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMN 335 E +TYR HS SD A+ YR+ EE+++ R+ +PI + RK L N+ W E + E + N Sbjct: 318 EFMTYRAGHHSTSDDASRYRSNEELSKWRNEQNPIIRFRKYLEKNQLWNEEMEKTERDTN 377 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDIL 363 RK + + + + +P EL D+ Sbjct: 378 -RKTVLSLLAKVEHAPKPHLDELVLDVF 404 >gi|293552860|ref|ZP_06673518.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Enterococcus faecium E1039] gi|291602994|gb|EFF33188.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Enterococcus faecium E1039] Length = 369 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 17/298 (5%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + + + D ++ YR+ ++ Sbjct: 54 MVWSRVLDQRSTALNRQGRLGFFAPTA-GQEASQLASAYAFDKEDVLLPGYRDVPQLVKH 112 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ S+ G G S + + I+GAQ G+A K R Sbjct: 113 GLPLSQAFLWSRGHAAGNS---------YPEELKALPPQIIIGAQYVQAAGVALGLKKRN 163 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + GDG ++QG YE+ N A ++ N ++ I+NN YA+ T + +A +++ Sbjct: 164 KKNVVFTYTGDGGSSQGDFYEAINFAGAYHANAVFYIQNNGYAISTPREKQTAAKTLAQK 223 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ IPG+QVDGMD AV A + + GP++IE LTYRY H++S DP YR Sbjct: 224 AVAAGIPGIQVDGMDPLAVYTVSKMAREWAISGNGPVLIETLTYRYGPHTLSGDDPTRYR 283 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 T++ ++ + DP+ + RK L W+ E + + IE +I A++DK P Sbjct: 284 TKDTDDDWQKK-DPLIRFRKYLTEKGLWSEEKEEQVIEATKEEI---KAAIAEADKVP 337 >gi|119470333|ref|ZP_01613092.1| 2-oxoisovalerate dehydrogenase alpha subunit (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) [Alteromonadales bacterium TW-7] gi|119446505|gb|EAW27780.1| 2-oxoisovalerate dehydrogenase alpha subunit (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) [Alteromonadales bacterium TW-7] Length = 404 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 153/328 (46%), Gaps = 15/328 (4%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +K + Y M IR +E+ G V F C+G+EA + +L + D ++ Sbjct: 46 ISKHTAIKLYETMRFIRLLDERMQGAQRQGRVS-FYMQCLGEEAAVTASAAALDQEDMIM 104 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YRE + G + M ++ + + KG+ +H S K + +G Q+ Sbjct: 105 AQYREQAALHYRGFTLDQFMNQMFSNELDLGKGRQMPIHYGSNKLNYMTISSPLGTQIPQ 164 Query: 167 GTGIAFANKYRRSD-----------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 TG A+ K + D + + FG+GAA++G + N+AA+ VI+ Sbjct: 165 ATGYAYGQKVKHIDAKTGELASTIENVTICYFGEGAASEGDFHAGLNMAAVHKAPVIFFA 224 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 NN YA+ T + RGV + I ++VDG D AV A KA P+ Sbjct: 225 RNNGYAISTPADEQFKGDGIASRGVGYGIKTIRVDGTDALAVFAATQKAREIASTQGEPV 284 Query: 276 IIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 +IE + YR HS S DP+ YR+++E E PIE+ +K L+ +W +E D + + Sbjct: 285 LIESIAYRLGAHSTSDDPSGYRSKDE--EANYKTCPIEKFKKWLVKQQWLNEEDDLKAKE 342 Query: 335 NVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++R+ I +++ A+ ++P EL SD+ Sbjct: 343 SIREDILAALKRAEVVQKPALEELVSDV 370 >gi|116494794|ref|YP_806528.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Lactobacillus casei ATCC 334] gi|191638309|ref|YP_001987475.1| Pyruvate dehydrogenase complex, E1 component, alpha subunit [Lactobacillus casei BL23] gi|227535205|ref|ZP_03965254.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631606|ref|ZP_04674637.1| acetoin dehydrogenase complex [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066360|ref|YP_003788383.1| acetoin dehydrogenase complex, E1 component subunit alpha [Lactobacillus casei str. Zhang] gi|116104944|gb|ABJ70086.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Lactobacillus casei ATCC 334] gi|190712611|emb|CAQ66617.1| Pyruvate dehydrogenase complex, E1 component, alpha subunit [Lactobacillus casei BL23] gi|227187089|gb|EEI67156.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526071|gb|EEQ65072.1| acetoin dehydrogenase complex [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438767|gb|ADK18533.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Lactobacillus casei str. Zhang] gi|327382335|gb|AEA53811.1| Pyruvate dehydrogenase alpha subunit [Lactobacillus casei LC2W] gi|327385536|gb|AEA57010.1| Pyruvate dehydrogenase alpha subunit [Lactobacillus casei BD-II] Length = 370 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 87/316 (27%), Positives = 152/316 (48%), Gaps = 23/316 (7%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + +Q + M+ R +++A L G +G F G+EA ++G ++ D Sbjct: 40 MPDLSDDQLVDLMSKMVWQRVLDQRATALNRQGRLG-FYAPSAGEEASMIGSHSAMKTTD 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ AYR+ ++ G+ K G G + H + I+GAQ Sbjct: 99 WLLPAYRDLPQLIQHGLPLDKAFLWSRGHVAGNEYPE--DFHALPPQI-------IIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K SD++ GDG +QG YE N A + I+++++N +A+ Sbjct: 150 YVQTAGVALGLKKNGSDEVAFTYTGDGGTSQGDFYEGVNFAGHFKAPAIFIVQDNGFAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + +A +++ V+ IPG+QVDGMD AV +A A+ A GP++IE LTYR Sbjct: 210 VPRASQTAAKTLAQKAVAAGIPGVQVDGMDALAVYEVTKEARAWTAAGNGPVLIETLTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL----LHNKWASEGDLKEIEMNVR 337 Y H++S DP YR++ E +E+ DP+ ++R L L NK + + +++ ++ Sbjct: 270 YGPHTLSGDDPTRYRSK-ETDELWQKRDPLIRMRNYLTDKGLWNKDKEDALIDQVKDEIK 328 Query: 338 KIINNSVEFAQSDKEP 353 IN ++DK P Sbjct: 329 DAIN------KADKAP 338 >gi|254556972|ref|YP_003063389.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Lactobacillus plantarum JDM1] gi|254045899|gb|ACT62692.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Lactobacillus plantarum JDM1] Length = 370 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 94/313 (30%), Positives = 148/313 (47%), Gaps = 16/313 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 VS+++ EQ + ++LML R +++ L G +G F GQEA +G ++ + D Sbjct: 39 VSKYSNEQLVEFFKLMLWERTLHQRSNALTRQGRLG-FYAPTEGQEASEMGSNAAMKKTD 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ AYR+ ++ G+ K A L R + H + I+GAQ Sbjct: 98 VLMPAYRDIPQLIQHGLPVYK--AFLWSRGHVLGNEYPEDFHAMPPQI-------IIGAQ 148 Query: 164 VSLGTGIAFA-NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 G+A K DK+ GDG +QG YE N A + +++++NN YA+ Sbjct: 149 YVQAAGVALGIKKNGTEDKVAYTYTGDGGTSQGDFYEGMNFAGAFEAPAVFIVQNNGYAI 208 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +A +++ V+ IP +QVDGMD AV A Y A GP++IE LTY Sbjct: 209 SVPRRKQTAAKTLAQKAVAAGIPSVQVDGMDFLAVYEVTKAAREYAAAGNGPVMIETLTY 268 Query: 283 RYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 R+ H+ + DP YRT+ E N DP+ + RK L SE E V++ I Sbjct: 269 RFGPHTNAGDDPKRYRTKGEEQPWFDN-DPLIRYRKYLTDQGVWSEDQENEYVEQVKEDI 327 Query: 341 NNSVEFAQSDKEP 353 +V+ Q+D+ P Sbjct: 328 KAAVK--QADEAP 338 >gi|167463539|ref|ZP_02328628.1| PdhA [Paenibacillus larvae subsp. larvae BRL-230010] Length = 354 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 83/260 (31%), Positives = 138/260 (53%), Gaps = 12/260 (4%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ R ++E+A L G +G + + GQEA ++G + +L + D + YR+ I+ Sbjct: 43 RRMVFTRVWDERAINLGRQGRLGFYAPVS-GQEASMIGSEFALNKEDFICPGYRDIPQIV 101 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G+ + G Q G ++ M I+GAQ+ TG+A A K Sbjct: 102 WHGLPMYQAFLYSRGHQHGGQIPDDVNVLMPQI---------IIGAQILHATGVAMAFKK 152 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 + ++ + GDG +++G YE N A + L IY+++NN YA+ T S+ +A + + Sbjct: 153 KGEKRVAITYTGDGGSSEGDFYEGLNFAGAFKLPAIYMVQNNGYAITTPFSKQTAAQSIA 212 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANY 295 + ++ I G+QVDGMD+ AV A + +A R +G +IE LTYR++ HSM+ D + Y Sbjct: 213 HKALATGIRGVQVDGMDVLAVYAAVHEAAEKARNGEGATLIESLTYRFKPHSMADDTSKY 272 Query: 296 RTREEINEMRSNHDPIEQVR 315 RT++E E + DPI + R Sbjct: 273 RTKDEEGEW-APKDPIVRFR 291 >gi|229489965|ref|ZP_04383818.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodococcus erythropolis SK121] gi|229323066|gb|EEN88834.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodococcus erythropolis SK121] Length = 362 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 91/268 (33%), Positives = 135/268 (50%), Gaps = 13/268 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +++ ++ LS YR +++ RR + +A L G +G + + +GQEA VG +L GD Sbjct: 28 ITDIGPDELLSLYRDLVVSRRIDTEAVALQRQGEIGLWAPM-LGQEAAQVGSARALAPGD 86 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 T+YREH GV LT GIS G FS N +VG+Q Sbjct: 87 FAFTSYREHAVAYCRGVPPEL----LTTMWRGISH-SGWDPEQFSVTNPAI----VVGSQ 137 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A ++ + FGDGA +QG + E+ AA + + V++ +NNQ+A+ Sbjct: 138 GLHATGYALGAHLDGAEIATIAYFGDGATSQGDIAEAMGFAASFRVGVVFFCQNNQWAIS 197 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 VS S +T S R + + IP ++VDG D+ AV A A+ R GP IE +T R Sbjct: 198 EPVSLQS-RTPISHRAIGYGIPAIRVDGNDVLAVLAVTRSALNRAREGSGPTFIEAITCR 256 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDP 310 H+ S DP+ YRT +++E RS DP Sbjct: 257 MGPHTTSDDPSRYRTDTDMSEWRSR-DP 283 >gi|55980198|ref|YP_143495.1| 2-oxoisovalerate dehydrogenase, E1 component subunit alpha [Thermus thermophilus HB8] gi|81600566|sp|Q5SLR4|ODBA_THET8 RecName: Full=2-oxoisovalerate dehydrogenase subunit alpha; AltName: Full=Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; Short=BCKDH E1-alpha gi|47169247|pdb|1UM9|A Chain A, Branched-Chain 2-Oxo Acid Dehydrogenase (E1) From Thermus Thermophilus Hb8 In Apo-Form gi|47169249|pdb|1UM9|C Chain C, Branched-Chain 2-Oxo Acid Dehydrogenase (E1) From Thermus Thermophilus Hb8 In Apo-Form gi|47169251|pdb|1UMB|A Chain A, Branched-Chain 2-Oxo Acid Dehydrogenase (E1) From Thermus Thermophilus Hb8 In Holo-Form gi|47169253|pdb|1UMB|C Chain C, Branched-Chain 2-Oxo Acid Dehydrogenase (E1) From Thermus Thermophilus Hb8 In Holo-Form gi|47169255|pdb|1UMC|A Chain A, Branched-Chain 2-Oxo Acid Dehydrogenase (E1) From Thermus Thermophilus Hb8 With 4-Methylpentanoate gi|47169257|pdb|1UMC|C Chain C, Branched-Chain 2-Oxo Acid Dehydrogenase (E1) From Thermus Thermophilus Hb8 With 4-Methylpentanoate gi|47169259|pdb|1UMD|A Chain A, Branched-Chain 2-Oxo Acid Dehydrogenase (E1) From Thermus Thermophilus Hb8 With 4-Methyl-2-Oxopentanoate As An Intermediate gi|47169261|pdb|1UMD|C Chain C, Branched-Chain 2-Oxo Acid Dehydrogenase (E1) From Thermus Thermophilus Hb8 With 4-Methyl-2-Oxopentanoate As An Intermediate gi|55771611|dbj|BAD70052.1| 2-oxoisovalerate dehydrogenase, E1 component alpha subunit [Thermus thermophilus HB8] Length = 367 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 80/265 (30%), Positives = 127/265 (47%), Gaps = 4/265 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 YR ML R +E+ L G F G EA V + ++ G D + YR+HG Sbjct: 42 YRDMLAARMLDERYTILIRTGKTS-FIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGL 100 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 LA G+ +++ ++ + +KG+ H S F+ + + V G A + Sbjct: 101 ALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISM 160 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K R+ ++ V FGDGA ++G Y N AA+ +++ ENN YA+ + Sbjct: 161 KLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQTHSPT 220 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + + +F IPG VDGMD+ A + +AV R +GP ++E+ YRY HS + D + Sbjct: 221 IADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDS 280 Query: 294 NYRTREEINEMRSNHDPIEQVRKRL 318 YR +EE+ R DPI + R+ L Sbjct: 281 RYRPKEEVAFWRKK-DPIPRFRRFL 304 >gi|256824125|ref|YP_003148085.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component subunit alpha [Kytococcus sedentarius DSM 20547] gi|256687518|gb|ACV05320.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Kytococcus sedentarius DSM 20547] Length = 401 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 85/272 (31%), Positives = 131/272 (48%), Gaps = 21/272 (7%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+L+RR + + L G +G + L +GQEA VGM +L D + YREHG Sbjct: 74 RDMVLVRRVDAEGFALQRQGELGLWPSL-LGQEAAQVGMGRALKPQDYVFPGYREHGLAW 132 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----- 171 GVD ++ G G K + H+++ ++G Q+ TG A Sbjct: 133 TKGVDPENLLGMFRGVNHGGWDSKQNNFHLYTI---------VIGNQMLHATGYARGVQL 183 Query: 172 ---FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 +A D V C GDG +QG E+ AA+ ++ ++NNQ+A+ R Sbjct: 184 DGAWATGDDTVDTAVVACTGDGGTSQGDYNEAMVFAAVAKSPCVFFVQNNQWAISEPTHR 243 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 F KR F PG++VDG DI A A A+ + R+ KGP+++E TYR H+ Sbjct: 244 NFVVEPF-KRAAGFGFPGVRVDGNDILASLAVGAWALDHARSGKGPVLVEAFTYRMGAHT 302 Query: 289 MS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 S DP YR ++ R+ DPI++++K ++ Sbjct: 303 TSDDPTKYREDSQVEAWRAK-DPIDRLKKHMV 333 >gi|110634612|ref|YP_674820.1| twin-arginine translocation pathway signal [Mesorhizobium sp. BNC1] gi|110285596|gb|ABG63655.1| Twin-arginine translocation pathway signal [Chelativorans sp. BNC1] Length = 375 Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 151/335 (45%), Gaps = 24/335 (7%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEK-AGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 GF + + +Q + + +L IR E A ++ G+ H GQEAV VG+ +L Sbjct: 20 GFWAKDLSDQQLVDMFTTILRIRWHERTMADKMLTDPNYRGYNHFYAGQEAVAVGVCSAL 79 Query: 100 ------TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 D + +R GH +A GVD + AE R G++ G MH+ + GF Sbjct: 80 RNSGGVMHADLAYSTHRPTGHAIAKGVDMKLMAAENDFRATGLNGGYAAEMHLCDPEVGF 139 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 G G++G + +G AFA K R SD++ V GDG + + N AAL L IY Sbjct: 140 IGADGMIGPGPVIASGSAFAIKARGSDQVVVNFGGDGTYATPHFHSTLNNAALLKLPFIY 199 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 V+ENN Y S + + + ++ IPG+ VDG D+ V AV RA +G Sbjct: 200 VLENNLYHQYAHYSYSCPLKDIADAANTYGIPGIVVDGQDVIQVYNAAKTAVDRARAGEG 259 Query: 274 PIIIEMLTYRYRGHSMS-------------DPANYRTREEINEMRS--NHDPIEQVRKRL 318 P +IE TYRY H + DP + E+RS DP+ L Sbjct: 260 PTLIEAKTYRYYNHWGAPGAKPGELGAFGYDPLAISSFRPERELRSWMQRDPVRIAHDIL 319 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ EIE +V++ + ++ FA + ++P Sbjct: 320 VNWGVIDHAKAAEIEASVKQDVADA--FAWAAEQP 352 >gi|322382115|ref|ZP_08056039.1| pyruvate dehydrogenase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153929|gb|EFX46285.1| pyruvate dehydrogenase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 370 Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 83/260 (31%), Positives = 138/260 (53%), Gaps = 12/260 (4%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ R ++E+A L G +G + + GQEA ++G + +L + D + YR+ I+ Sbjct: 59 RRMVFTRVWDERAINLGRQGRLGFYAPVS-GQEASMIGSEFALNKEDFICPGYRDIPQIV 117 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G+ + G Q G ++ M I+GAQ+ TG+A A K Sbjct: 118 WHGLPMYQAFLYSRGHQHGGQIPDDVNVLMPQI---------IIGAQILHATGVAMAFKK 168 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 + ++ + GDG +++G YE N A + L IY+++NN YA+ T S+ +A + + Sbjct: 169 KGEKRVAITYTGDGGSSEGDFYEGLNFAGAFKLPAIYMVQNNGYAITTPFSKQTAAQSIA 228 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANY 295 + ++ I G+QVDGMD+ AV A + +A R +G +IE LTYR++ HSM+ D + Y Sbjct: 229 HKALATGIRGVQVDGMDVLAVYAAVHEAAEKARNGEGATLIESLTYRFKPHSMADDTSKY 288 Query: 296 RTREEINEMRSNHDPIEQVR 315 RT++E E + DPI + R Sbjct: 289 RTKDEEGEW-APKDPIVRFR 307 >gi|120435970|ref|YP_861656.1| 2-oxoisovalerate dehydrogenase E1 component subunits alpha and beta [Gramella forsetii KT0803] gi|117578120|emb|CAL66589.1| 2-oxoisovalerate dehydrogenase E1 component subunits alpha and beta [Gramella forsetii KT0803] Length = 685 Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 85/322 (26%), Positives = 155/322 (48%), Gaps = 12/322 (3%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 ++ ++ + + L YR ML R EEK L G + + IGQEA+ VG+ SL Sbjct: 30 YKETQLSNDAMLDLYRSMLKPRMIEEKMLILLRQGKISKWFS-GIGQEAISVGVTKSLET 88 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 + ++ +R G + + +++ A+ G+ G +KG+ S H + + G +G Sbjct: 89 EEYILPMHRNLGVFTSREIPLNRLFAQWQGKASGFTKGRDRSFHFGTQEYNIVGMISHLG 148 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ + GIA A+K + K+ V G+G ++G +E+ NIA++W+L V++ IENN Y Sbjct: 149 PQLGVADGIALAHKLKNEKKLTAVFSGEGGTSEGDFHEALNIASVWDLPVLFCIENNGYG 208 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T + + RG + + +DG +I V + + R P+++E T Sbjct: 209 LSTPTVEQYRCKDLADRGAGYGMESHIIDGNNILEVYTKISEIAESIRKEPRPVLVEFKT 268 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL---------LHNKWASEGDLKEI 332 +R RGH + Y +E ++E + DP+ + L L K+ +E L EI Sbjct: 269 FRMRGHEEASGTKYVPQELMDEWQQK-DPVLNFEEYLIAKNILTNDLKEKFRTE-ILAEI 326 Query: 333 EMNVRKIINNSVEFAQSDKEPD 354 + N++ + + + + KE D Sbjct: 327 DKNLQLAFSEDIIVSDATKELD 348 >gi|116671110|ref|YP_832043.1| pyruvate dehydrogenase (acetyl-transferring) [Arthrobacter sp. FB24] gi|116611219|gb|ABK03943.1| Pyruvate dehydrogenase (acetyl-transferring) [Arthrobacter sp. FB24] Length = 359 Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 90/294 (30%), Positives = 134/294 (45%), Gaps = 32/294 (10%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 L G Q Y LM+ +R + A G++ G+ +GQEA VG Sbjct: 21 LLSGQPAGPLTAGQLRELYSLMVAVRHLDTSAIAWQRQGLIPGYAP-ELGQEAAQVGSGY 79 Query: 98 SL-TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 ++ T D + YRE G A GVD M S H + G Y Sbjct: 80 AVDTARDFVFPTYREMGVARAMGVDMVAYM----------------STHKATWHGGLYDP 123 Query: 157 --------HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 +V V G A ++D + + FGDGA++QG V+E+ N AA+ Sbjct: 124 LESRLAPIQAVVAGSVLHAVGWAHGQTLDQTDGVAMAYFGDGASSQGDVHEAMNFAAVMR 183 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 V++ ++NN +A+ R A + + R + IP +++DG D+ AV +A A+ Sbjct: 184 APVVFFVQNNGWAISVPTERQVAGGSVAARAAGYGIPALRIDGNDVVAVVDATRRAFAHA 243 Query: 269 RAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSN--HDPIEQVRKRLL 319 RA GP++IE +TYR HS S DP YR+ +NE R + DP+E+ RK LL Sbjct: 244 RAGHGPVLIEAMTYRRGPHSTSDDPGRYRS---LNEERDDAGEDPLERFRKTLL 294 >gi|111020369|ref|YP_703341.1| pyruvate dehydrogenase E1 component alpha subunit [Rhodococcus jostii RHA1] gi|110819899|gb|ABG95183.1| pyruvate dehydrogenase E1 component alpha subunit [Rhodococcus jostii RHA1] Length = 361 Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 151/309 (48%), Gaps = 15/309 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y ++++RR + +A L G +G + L +GQEA VG +L D + +YREHG Sbjct: 39 YEDLVVVRRIDAEATALQRQGELGLWAPL-LGQEAAQVGSARALRPDDFVFASYREHGVA 97 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 VD + + L +G G + +T IVGAQ TG A + Sbjct: 98 YCRDVDPTHM---LRFWRGSTHSGWNPFEYNMTTPAI------IVGAQALHATGYAMGMQ 148 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + SD + FGDGA +QG + E+F AA ++ V++ +NNQ+A+ VS S + + Sbjct: 149 FDGSDGAAITYFGDGATSQGDISEAFGFAASFHAPVVFFCQNNQWAISEPVSLQS-RVSI 207 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + RG F +P ++VDG D+ AV A A+ R GP +IE +TYR H+ S DP+ Sbjct: 208 AARGRGFGVPSVRVDGNDVLAVIAVTRAALERAREGSGPTLIEAVTYRMGPHTTSDDPSR 267 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD-LKEIEMNVRKIINNSVEFAQSDKEP 353 YR ++E DP++++R LL + A + D L ++ EP Sbjct: 268 YRP-AALDEEWKRKDPLDRIRA-LLESAGAIDDDYLAAMQQRADDTAAALRRGCLETVEP 325 Query: 354 DPAELYSDI 362 +P L+ ++ Sbjct: 326 EPMSLFDNV 334 >gi|31792031|ref|NP_854524.1| dehydrogenase [Mycobacterium bovis AF2122/97] gi|31617618|emb|CAD93728.1| PROBABLE DEHYDROGENASE [Mycobacterium bovis AF2122/97] Length = 334 Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 87/315 (27%), Positives = 149/315 (47%), Gaps = 6/315 (1%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG ++ +EL YR M ++R + QL G++ G GQEAV VG +L Sbjct: 6 EGLAAFVVDQLEEL--YRRMWVLRLLDMALEQLRIEGLINGPLQGGFGQEAVSVGAAAAL 63 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD +IT +R H + ++A++ G G +G H+ + G + Sbjct: 64 GEGDVIITTHRPHAQHVGTDAPLGPVIADMLGATAGDLEGADEDAHIADPRAGLPAAIRV 123 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V L G A+A R + ++ + D + E+ ++AA+W L V+ ++EN + Sbjct: 124 VKQSPLLAIGHAYALWLRDTGRVTLCVTQDCDVDADAFNEAADLAAVWQLPVVILVENIR 183 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 A+ + R + + +R V++ +PG+ VDG D+ AV+ + AV RA GP +++ Sbjct: 184 GALSVHLGRYTHEPRVYRRAVAYGMPGVSVDGNDVEAVRDCVANAVVRARAGGGPTLVQA 243 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +TYR S SD YR ++ DP+ R+RL+ + G L E E + Sbjct: 244 ITYRTTDFSGSDRGGYR---DLAGSEQFLDPLIFARRRLIAAG-TTRGRLDEQERAACQQ 299 Query: 340 INNSVEFAQSDKEPD 354 + ++V FA+ P+ Sbjct: 300 VADAVAFAKDRARPN 314 >gi|284993208|ref|YP_003411763.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Geodermatophilus obscurus DSM 43160] gi|284066454|gb|ADB77392.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geodermatophilus obscurus DSM 43160] Length = 412 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 87/264 (32%), Positives = 133/264 (50%), Gaps = 13/264 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR ++L+RR++ +A L G +G + L +GQEA VG +L GD YREHG Sbjct: 89 YRDLVLVRRWDVEATALQRQGELGIWASL-LGQEAAQVGAGRALQPGDMAFPTYREHGVA 147 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GVD +M+ G G + ++++ ++GAQ TG A + Sbjct: 148 WTRGVDPLHVMSLFRGVDNGGWDPVATAFNLYTV---------VIGAQTLHATGYAMGVQ 198 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 ++ + GDGA +QG+V E+ AA ++ V++ +NNQYA+ + R S + Sbjct: 199 RDGAETAVLAFLGDGATSQGEVNEAMIWAASFSAPVVFFCQNNQYAISVPLERQS-RVPL 257 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 +R F PG++VDG D+ AV A A+A R +GP +E TYR H+ S DP Sbjct: 258 YQRAAGFGFPGVRVDGNDVLAVLAVTRAALAAAREGQGPTFVEAFTYRMGAHTTSDDPTR 317 Query: 295 YRTREEINEMRSNHDPIEQVRKRL 318 YR E+ E + DPI +V+ L Sbjct: 318 YRLASELEEWKLR-DPIARVKAYL 340 >gi|315500950|ref|YP_004079837.1| pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit [Micromonospora sp. L5] gi|315407569|gb|ADU05686.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Micromonospora sp. L5] Length = 392 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 96/324 (29%), Positives = 153/324 (47%), Gaps = 20/324 (6%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +F E+ YR ++L+R+ + +A L G +G + L +GQEA VG +L D Sbjct: 55 DFTDEEYRGLYRDLVLVRKLDAEATALQRQGELGLWASL-LGQEAAQVGSGRALRTQDMA 113 Query: 106 ITAYREHGHILACGVDASKIMAELTG-RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 YREHG + G+D + G QGG + +M++ ++GAQ Sbjct: 114 FPTYREHGVLYCRGIDPIMPLGLFRGVDQGGWDPNEF-KFNMYTI---------VIGAQT 163 Query: 165 SLGTG----IAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG +A K D V+ FGDGA +QG V ESF A+++N +++ +NNQ Sbjct: 164 LHATGYAMGVAMDGKTGGEDGEAVIAYFGDGATSQGDVNESFVWASVFNAPLVFFCQNNQ 223 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ + R + + +R F PG++VDG D+ A A A+ R +GP +IE Sbjct: 224 YAISEPLERQT-RVPLYRRAGGFGFPGVRVDGNDVLASYAVTRHALDNARNGQGPSLIEA 282 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYR H+ S DP YR E+ ++ DPI +++ L K A E ++ R Sbjct: 283 YTYRMGAHTTSDDPTRYRIASEVEAWQAK-DPIARMKAFLTKQKIADESFFTAVDEQART 341 Query: 339 IINNSVEFAQSDKEPDPAELYSDI 362 + E + +P P ++ + Sbjct: 342 ESVHLRERVLAMPDPQPVTMFDHV 365 >gi|301105689|ref|XP_002901928.1| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor [Phytophthora infestans T30-4] gi|262099266|gb|EEY57318.1| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor [Phytophthora infestans T30-4] Length = 419 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/277 (27%), Positives = 134/277 (48%), Gaps = 1/277 (0%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EA+ G +L GD + YRE G ++ G + + + G KG+ +H Sbjct: 113 GEEAISFGSASALRLGDMVFAQYREPGVLMWRGFTLQEFADQCFSNKDGHGKGRQMPVHY 172 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 S + Q+ G A+A K + D+I V FG+GAA++G + + N A+ Sbjct: 173 GSKNLNHQTISSPLATQLPQAAGAAYAFKLAKEDRISVCYFGEGAASEGDFHAALNFAST 232 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 + +++ + NN +A+ TS + RG + IP M+VDG D AV +A Sbjct: 233 KDCPILFFVRNNGFAISTSTKEQFRGDGIASRGSGYGIPIMRVDGNDFLAVHEATRRARE 292 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 Y P++IE ++YR HS SD + YR EI + + DPIE+ ++ LL W + Sbjct: 293 YILKENRPVLIEAMSYRQGHHSTSDDSTQYRAVAEIKQWKETCDPIERTKRYLLKRGWLT 352 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 E + ++ N R + +++ A++ + P ++ D+ Sbjct: 353 EEQDRLMQDNERTNVLAALQQAETKERPALETMFEDV 389 >gi|46200059|ref|YP_005726.1| 2-oxoisovalerate dehydrogenase alpha subunit [Thermus thermophilus HB27] gi|81567557|sp|Q72GU1|ODBA_THET2 RecName: Full=2-oxoisovalerate dehydrogenase subunit alpha; AltName: Full=Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; Short=BCKDH E1-alpha gi|46197687|gb|AAS82099.1| 2-oxoisovalerate dehydrogenase alpha subunit [Thermus thermophilus HB27] Length = 367 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 81/265 (30%), Positives = 126/265 (47%), Gaps = 4/265 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 YR ML R +E+ L G F G EA V + ++ G D + YR+HG Sbjct: 42 YRDMLAARMLDERYTILIRTGKTS-FIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGL 100 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 LA G+ ++ ++ + +KG+ H S F+ + + V G A + Sbjct: 101 ALALGIPLKELFGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISM 160 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K R+ ++ V FGDGA ++G Y N AA+ ++V ENN YA+ + Sbjct: 161 KLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFVCENNFYAISVDYRHQTHSPT 220 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + + +F IPG VDGMD+ A + +AV R +GP ++E+ YRY HS + D + Sbjct: 221 IADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDS 280 Query: 294 NYRTREEINEMRSNHDPIEQVRKRL 318 YR +EE+ R DPI + R+ L Sbjct: 281 RYRPKEEVAFWRKK-DPIPRFRRFL 304 >gi|218288378|ref|ZP_03492668.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Alicyclobacillus acidocaldarius LAA1] gi|218241351|gb|EED08525.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Alicyclobacillus acidocaldarius LAA1] Length = 355 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/307 (28%), Positives = 142/307 (46%), Gaps = 19/307 (6%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E+ E + L Y M R+F+E+A L G +G + GQEA +G +L Sbjct: 25 ELPENAADLALKWYPFMSFCRKFDERAQLLQRQGRLGTYAPF-RGQEAAQIGSFAALRSS 83 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE ++ G++ + + G +G +M + A Sbjct: 84 DWVFPTYRELAGMMYHGLEPVHALLKSRGHPDAGRMPEGLNMAPPQIA---------IAA 134 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G +A K + D I V FGDGA ++G +E N A++ L V++ +NNQYA+ Sbjct: 135 QILHAVGAGWACKLQEKDDIAVAYFGDGATSEGDFHEGMNFASVMRLPVVFFCQNNQYAI 194 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 V R +A +++ +++ + G++VDG D+ AV M AV R GP +IE +TY Sbjct: 195 SVPVDRQTASPTIAQKAIAYGMEGLRVDGNDVFAVYQAMRYAVERARRGDGPTLIEAVTY 254 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK---WASEGDL---KEIEMN 335 R H+ + DP YR ++ + DP+ VR RL + W E E E Sbjct: 255 RLGPHTTADDPGRYREAADVEPWATARDPL--VRLRLWLTRQGLWDDERQSACEAEAEAR 312 Query: 336 VRKIINN 342 VR+ + + Sbjct: 313 VRQAVAD 319 >gi|291224167|ref|XP_002732079.1| PREDICTED: branched chain keto acid dehydrogenase E1, alpha polypeptide-like [Saccoglossus kowalevskii] Length = 444 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/288 (29%), Positives = 140/288 (48%), Gaps = 11/288 (3%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F G+E VG +L GD + YRE G ++ G + M + G + KG+ Sbjct: 126 FYMTNFGEEGTHVGSAAALDGGDLVFGQYREAGVLMWRGFKLDQFMNQCYGNTLDVGKGR 185 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYE 199 +H S + FY + Q+ +G A+A K R +CVVC FGDGAA++G + Sbjct: 186 QMPVHYGSQELNFYTISSPLATQMPQASGAAYALK-RAGKDLCVVCYFGDGAASEGDAHA 244 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV-- 257 + N AA ++ VI+ NN YA+ T + RG + I ++VDG D+ AV Sbjct: 245 ALNFAATLDVPVIFFCRNNGYAISTPTHEQYRGDGIASRGHGYGIYSVRVDGNDVFAVYN 304 Query: 258 --KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQV 314 KA + A+ R P++IE +TYR HS SD ++ YR+ +E++ PI ++ Sbjct: 305 ATKAARNIAIKESR----PVLIEAMTYRIGHHSTSDDSSAYRSVDEVHYWDKQDHPISRL 360 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 R ++ W K + R+ + + + A+ +P P EL++D+ Sbjct: 361 RNYMMSQDWWDADKEKAWMVETRENVMQAFQKAEKSLKPSPTELFADV 408 >gi|146300590|ref|YP_001195181.1| dehydrogenase, E1 component [Flavobacterium johnsoniae UW101] gi|146155008|gb|ABQ05862.1| dehydrogenase, E1 component [Flavobacterium johnsoniae UW101] Length = 658 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 80/294 (27%), Positives = 143/294 (48%), Gaps = 2/294 (0%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 R EEK L G V + IGQEA+ VG+ L + + ++ +R G + Sbjct: 24 RLIEEKMLILIRQGKVSKWFS-GIGQEAIAVGVTSVLDDSEYVLPMHRNLGVFTTRNIPL 82 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 ++ ++ G+ G +KG+ S H + K G +G Q+ + GIA ANK + + K+ Sbjct: 83 HRLFSQWQGKANGFTKGRDRSFHFGTQKYNIIGMISHLGPQLGIADGIALANKLQDNKKV 142 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 V G+GA ++G +E+ NIAA+W L V+++IENN Y + T + N + +G+ + Sbjct: 143 TAVFTGEGATSEGDFHEALNIAAVWKLPVMFIIENNGYGLSTPTNEQYLCENLADKGIGY 202 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEIN 302 I +DG +I V + K A P+ +E T+R RGH + Y +E ++ Sbjct: 203 GIESWIIDGNNIVEVYNKLSKLKEEMIADPHPVFLEFKTFRMRGHEEASGTKYVPQELMD 262 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 + DP+ +K L +E ++ + +++ I+ + A ++ E +P Sbjct: 263 QWEL-RDPVTNYKKYLTEIGVLTEELDEKYKAEIKQEIDENWAMANAEPEIEPT 315 >gi|320333112|ref|YP_004169823.1| 3-methyl-2-oxobutanoate dehydrogenase [Deinococcus maricopensis DSM 21211] gi|319754401|gb|ADV66158.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Deinococcus maricopensis DSM 21211] Length = 366 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 90/312 (28%), Positives = 148/312 (47%), Gaps = 7/312 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMITAYREHGH 114 +R ML R F++K L G + G EA VG+ + + D + YR+ G Sbjct: 36 WRDMLRAREFDKKLVTLLRQGRTTFYAQAS-GMEATQVGIARGMRAKHDWIWPYYRDQGI 94 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 LA G+ ++++ G ++KG+ H + F + QV+ G A A Sbjct: 95 GLALGIPIRDLVSQCLGSNNDLNKGRQMPHHFGDARFNFMSISSSIANQVAPAAGTAMAQ 154 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY +D+I + FGDGA ++G + N+AA+ +++ ENNQ+A+ V +A N Sbjct: 155 KYLGTDEITICTFGDGATSEGDWHAGMNMAAVNGAPCLFICENNQWAISVPVHAQTASEN 214 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + ++ +PG VDG D+ AV+ + R +GP +IE LTYR HS +D Sbjct: 215 IHIKARAYGMPGYYVDGNDVIAVQEVVQHVADRVRRGEGPALIECLTYRVGSHSNADADA 274 Query: 295 ---YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK-EIEMNVRKIINNSVEFAQSD 350 YRTR+E+ E ++ DPI + L H E D + ++ + I +V A + Sbjct: 275 EKFYRTRDEV-EAWTSRDPIRRFEAYLDHLGQGIEADERAQLIQDTHAEIEAAVREADAS 333 Query: 351 KEPDPAELYSDI 362 PD ++ D+ Sbjct: 334 GFPDWRIMFDDV 345 >gi|295394901|ref|ZP_06805114.1| pyruvate dehydrogenase complex E1 component alpha subunit [Brevibacterium mcbrellneri ATCC 49030] gi|294972234|gb|EFG48096.1| pyruvate dehydrogenase complex E1 component alpha subunit [Brevibacterium mcbrellneri ATCC 49030] Length = 378 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/272 (31%), Positives = 133/272 (48%), Gaps = 21/272 (7%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+LIRR + + L G +G + L +GQEA +G+ +L D + YREHG Sbjct: 46 YRDMVLIRRVDAEGNALQRQGQLGLWVPL-LGQEAAQIGLGRALRPQDYVFPTYREHGVA 104 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GV+ ++ G+ K + ++++ ++G+QV TG A + Sbjct: 105 WCRGVEPETLLGIFRGQNHSGWDPKDNNFNVYTI---------VIGSQVMHATGYAMGVQ 155 Query: 176 YRRS--------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 + D I V C GDGA +QG V E+ A + V++ I+NNQ+A+ + + Sbjct: 156 IDGAVGTGDMDRDTIAVACCGDGATSQGDVSEALTFAGAFRAPVLFYIQNNQWAI-SEPN 214 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + RG F +PG++VDG DI AV + R+ +GP++IE TYR H Sbjct: 215 KVQTSVPLYTRGQGFGVPGVRVDGNDILAVYSVCRAYADRIRSGQGPMLIEAYTYRMGAH 274 Query: 288 SMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 + + DP YR E+ E DPI +VRK L Sbjct: 275 TTADDPTKYRDDAEV-EAWKPKDPILRVRKYL 305 >gi|58267618|ref|XP_570965.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Cryptococcus neoformans var. neoformans JEC21] gi|57227199|gb|AAW43658.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 504 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/327 (29%), Positives = 163/327 (49%), Gaps = 15/327 (4%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S+ KEQ LS YR M LI + Q G + F C G+EA IVG ++ D+ Sbjct: 128 SQATKEQTLSIYRTMTLIPIVDNVLYQSQRQGRIS-FYMQCAGEEAAIVGSAAAMLANDE 186 Query: 105 MITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YRE +L G +MA+ G +KG+ +H S ++GF+ + Q Sbjct: 187 IFGQYRESAALLHRGFTLDALMAQCFGNVDDKGTKGRMMPVHYSSPEHGFHTITSPLATQ 246 Query: 164 VSLGTGIAFANKY---RRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + G A+ K R+ D CV+C FGDGAA++G + + + ++ I+ NN Sbjct: 247 MPQAAGAAYMLKLDEERQGD--CVICYFGDGAASEGDFHAALGMNSVLGGPCIWFCRNNG 304 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+ T + A + RG ++ + ++VDG D AV A + +A K +++E Sbjct: 305 FAISTPIIDQYAGDGIASRGPAYGLDTIRVDGNDALAVYAAVCEARKRAVEGKKGVLVEA 364 Query: 280 LTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE-IEMNVR 337 +TYR HS SD ++ YR EE+ E +PI ++R L+ KW SE + K ++ N Sbjct: 365 MTYRVGHHSTSDDSSMYRAIEEVKEWSVVDNPIHRLRSYLVSKKWWSEEEEKALLKKNKA 424 Query: 338 KIINNSVEFAQSDKEPDP--AELYSDI 362 ++ F++++K P P E+++D+ Sbjct: 425 DVLK---AFSRAEKLPKPKLGEMFNDV 448 >gi|310779673|ref|YP_003968006.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Ilyobacter polytropus DSM 2926] gi|309748996|gb|ADO83658.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Ilyobacter polytropus DSM 2926] Length = 361 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 93/315 (29%), Positives = 155/315 (49%), Gaps = 20/315 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + E L YR M+L R +EK+ Q G + F +GQE V V ++ + D Sbjct: 29 MPEISDELILKMYRTMMLSRTQDEKSLQYQRQGRMLTFAP-SMGQEGVQVASAAAIEKTD 87 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +A+RE+ L G + G + G + ++ + +G Q Sbjct: 88 WVSSAFRENATWLWLGQPMENLFLYWIGSEEGSRIPEDVNLLPIAVP---------IGTQ 138 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + GI + K+R+ + + + GDG ++G+ YE+ N A N I++I+NNQ+A+ Sbjct: 139 CNHAVGIGMSIKFRKQNSVVLAYIGDGGTSEGEFYEAINYAGAMNTPNIFIIQNNQFAIS 198 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S + +++GV+ IP +QVDG DI AV A + +AV R +GP +IE +TYR Sbjct: 199 TPRSLQTKAKTLAQKGVAAGIPCIQVDGNDIFAVYAAVKEAVERGRNGEGPTLIEAVTYR 258 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIIN 341 H+ + DP YRT E EM DPI + + ++ W E E ++++ + Sbjct: 259 IGPHTTADDPTIYRTDEYHQEMLKT-DPIIRTKNYMIEKGIWDDEK-----ETSLKEELE 312 Query: 342 NSVE--FAQSDKEPD 354 N VE F + ++ PD Sbjct: 313 NLVEETFKKIEQTPD 327 >gi|332141378|ref|YP_004427116.1| Alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Alteromonas macleodii str. 'Deep ecotype'] gi|327551400|gb|AEA98118.1| Alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Alteromonas macleodii str. 'Deep ecotype'] Length = 395 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 89/306 (29%), Positives = 143/306 (46%), Gaps = 13/306 (4%) Query: 34 VDIPFLEGF----------EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCH 83 VDIP L+ + +KE+ L + M IR +E+ G + F Sbjct: 24 VDIPMLQVLSEQGELIKNAQEPNIDKEEALKIFNTMHYIRVLDERMVGAQRQGRIS-FYL 82 Query: 84 LCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGS 143 G+EA V +L+ D +++ YRE G + G + M ++ + +KG+ Sbjct: 83 ASTGEEAASVASAAALSNDDMIMSQYREQGALAYRGYTTDQFMNQMFSNKDDPNKGRQMP 142 Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 +H F +G Q+ +G A+ K D + + FG+GAA++G + N+ Sbjct: 143 IHYGDKTLNFMTISSPLGTQIPQASGYAYGQKMSGKDVVTICYFGEGAASEGDFHAGLNM 202 Query: 204 AALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 AA+ N VI+ NN YA+ T A + RG+ + + ++VDG D A+ A + Sbjct: 203 AAVLNCPVIFFCRNNGYAISTPAEEQFAGDGIASRGLGYGVKTIRVDGNDALAIYAATKE 262 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 A K P++IE +TYR HS S DP YR+REE ++ R+ DPI ++ K L Sbjct: 263 ARRIAIEEKCPVLIEAMTYRLAAHSTSDDPTGYRSREEEDKWRAK-DPIARMAKWLESKG 321 Query: 323 WASEGD 328 W +E D Sbjct: 322 WYNEAD 327 >gi|328950749|ref|YP_004368084.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Marinithermus hydrothermalis DSM 14884] gi|328451073|gb|AEB11974.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Marinithermus hydrothermalis DSM 14884] Length = 343 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/319 (27%), Positives = 147/319 (46%), Gaps = 12/319 (3%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 F E+ + Y+ + R F+EKA L G +G F + GQEA VG ++L D Sbjct: 17 PPFEAEELIEGYKALRRARFFDEKALILQRQGKLGVFPPIR-GQEAAQVGATLALRPTDW 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + +YRE G L G+ + ++ G F + + + Q+ Sbjct: 76 AVPSYRESGVALTHGLPLTHLILYWRAHPAGWR---------FPDEVRLLPFYIPIATQI 126 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G+A A +Y D + V GDG ++G +E N A+++N V++V++NN +A+ Sbjct: 127 PQAVGLAHAAQYHGEDWVVAVFIGDGGTSEGDFHEGLNFASVFNAPVLFVVQNNGWAISV 186 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SR + + R + IPG+ VDG D+ AV T +A R +GP +IE +TYR Sbjct: 187 PTSRQMKVPHVALRAQGYGIPGVVVDGNDLIAVWHTAREAAHRARNGEGPTLIEAMTYRI 246 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 H+ S DP YR +E E +P+++++ L H E + + + + Sbjct: 247 APHTTSDDPKRYRDEKEA-EAWLRKEPVKRMQNALKHLGLWDEERERALLEELEAEFQAA 305 Query: 344 VEFAQSDKEPDPAELYSDI 362 +E A EP+P E+ + Sbjct: 306 LEEADRTPEPEPWEIVEHV 324 >gi|134112029|ref|XP_775550.1| hypothetical protein CNBE2640 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258209|gb|EAL20903.1| hypothetical protein CNBE2640 [Cryptococcus neoformans var. neoformans B-3501A] Length = 504 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/327 (29%), Positives = 163/327 (49%), Gaps = 15/327 (4%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S+ KEQ LS YR M LI + Q G + F C G+EA IVG ++ D+ Sbjct: 128 SQATKEQTLSIYRTMTLIPIVDNVLYQSQRQGRIS-FYMQCAGEEAAIVGSAAAMLANDE 186 Query: 105 MITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YRE +L G +MA+ G +KG+ +H S ++GF+ + Q Sbjct: 187 IFGQYRESAALLHRGFTLDALMAQCFGNVDDKGTKGRMMPVHYSSPEHGFHTITSPLATQ 246 Query: 164 VSLGTGIAFANKY---RRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + G A+ K R+ D CV+C FGDGAA++G + + + ++ I+ NN Sbjct: 247 MPQAAGAAYMLKLDEERQGD--CVICYFGDGAASEGDFHAALGMNSVLGGPCIWFCRNNG 304 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+ T + A + RG ++ + ++VDG D AV A + +A K +++E Sbjct: 305 FAISTPIIDQYAGDGIASRGPAYGLDTIRVDGNDALAVYAAVCEARKRAVEGKKGVLVEA 364 Query: 280 LTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE-IEMNVR 337 +TYR HS SD ++ YR EE+ E +PI ++R L+ KW SE + K ++ N Sbjct: 365 MTYRVGHHSTSDDSSMYRPIEEVKEWSVVDNPIHRLRSYLVSKKWWSEEEEKALLKKNKA 424 Query: 338 KIINNSVEFAQSDKEPDP--AELYSDI 362 ++ F++++K P P E+++D+ Sbjct: 425 DVLK---AFSRAEKLPKPKLGEMFNDV 448 >gi|226307479|ref|YP_002767439.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Rhodococcus erythropolis PR4] gi|226186596|dbj|BAH34700.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Rhodococcus erythropolis PR4] Length = 362 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 13/320 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +++ ++ LS YR +++ RR + +A L G +G + + +GQEA VG +L D Sbjct: 28 ITDIGPDELLSLYRDLVVSRRIDTEAVALQRQGEIGLWAPM-LGQEAAQVGSARALAPDD 86 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 T+YREH GV LT GIS + T +VG+Q Sbjct: 87 FAFTSYREHAVAYCRGVPPEL----LTTMWRGISHSGWDPEQVNVTNPAI-----VVGSQ 137 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A ++ + FGDGA +QG + E+ AA + + V++ +NNQ+A+ Sbjct: 138 GLHATGYALGAHLDGAEIATIAYFGDGATSQGDIAEAMGFAASFRVGVVFFCQNNQWAIS 197 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 VS S +T S R + + IP ++VDG D+ AV A A+ R GP IE +T R Sbjct: 198 EPVSLQS-RTPISHRAIGYGIPAIRVDGNDVLAVLAVTRSALNRAREGSGPTFIEAITCR 256 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ S DP+ YR +++E RS DP+E++R L E +L I + Sbjct: 257 MGPHTTSDDPSRYRADTDMSEWRSR-DPLERMRLFLGRRDLLGENELSTIAAAADDVAAG 315 Query: 343 SVEFAQSDKEPDPAELYSDI 362 + +P P+ L+ + Sbjct: 316 LRRATIALADPPPSALFDHV 335 >gi|240171578|ref|ZP_04750237.1| putative pyruvate dehydrogenase E1 component subunit alpha [Mycobacterium kansasii ATCC 12478] Length = 355 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 87/287 (30%), Positives = 142/287 (49%), Gaps = 20/287 (6%) Query: 40 EGFEVSEFNKEQELSA------YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 +G +E ++LSA Y +M++ R +++ L G + F C GQEA V Sbjct: 14 DGKPTAEERYSRDLSAETLCWLYEMMVVTRELDDEFVNLQRQGELALFTP-CRGQEAAQV 72 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNG 152 G L D + YRE G L G+ + A G GG+ F+TK Sbjct: 73 GAAACLRAADWLFPQYRELGVYLVRGIPPGHVGAAWRGSWHGGLE---------FTTKC- 122 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 VG Q G A A + D + V GDGA ++G V+E+ N+A ++ + + Sbjct: 123 CAPMSVPVGTQTLHAVGAAMAAQRLGEDSVTVPFLGDGATSEGDVHEALNLAGVFRVPCL 182 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 + ++NNQ+A+ T V + +A + + + + + +PG++VDG D+ A A M +A RA Sbjct: 183 FYVQNNQWAISTPVRKQTAAVSIAHKAIGYGMPGIRVDGNDVLACYAVMAEAATRARAGN 242 Query: 273 GPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 GP +IE +TYR H+ + DP YR ++E++ + DPI + R+ L Sbjct: 243 GPSLIEAVTYRLGPHTTADDPTRYRDQQELDRWLA-LDPIPRFRRYL 288 >gi|55380241|ref|YP_138090.1| pyruvate dehydrogenase E1 component alpha subunit [Haloarcula marismortui ATCC 43049] gi|55232966|gb|AAV48384.1| pyruvate dehydrogenase E1 component alpha subunit [Haloarcula marismortui ATCC 43049] Length = 382 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 85/319 (26%), Positives = 157/319 (49%), Gaps = 20/319 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + Q L Y + L R F+++A G + + + GQE V ++L E D Sbjct: 38 VPDISDRQLLEMYETIKLARHFDQRAISFQRQGRLATYAPMT-GQEGSQVATSLALAEQD 96 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YREH A G+D + L G + G + + + Q Sbjct: 97 WLFPTYREHAAKYAHGMDLVSLFEPLRGYRDG---------YAIPDDVNVMPEYIPIATQ 147 Query: 164 VSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V G+A+ +K + + V+C GDGA ++G +E N A ++++ ++V NNQ+A+ Sbjct: 148 VPQAMGMAWGHKLQGKTETAVLCHLGDGATSEGDFHEGLNFAGVFDVPAVFVCNNNQWAI 207 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR----AHKGPIIIE 278 R +A +++ ++ I G++VDG+D AV +A+A R + P +IE Sbjct: 208 SVPRERQTASETIAEKAQAYGIDGVRVDGLDPLAVYKVASEALAKARNPGPGERRPTLIE 267 Query: 279 MLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK-EIEMNV 336 + YR+ H+ + DP+ YR E R + DP++++ K L+N+ + DL+ EI+ ++ Sbjct: 268 SVQYRFGAHTTADDPSVYRDESEEEAWR-DRDPVDRIEK-YLYNEGILDSDLESEIQDSI 325 Query: 337 RKIINNSVEFA-QSDKEPD 354 + ++ ++E A Q++ PD Sbjct: 326 EQEVSEAIETAEQTEASPD 344 >gi|89094581|ref|ZP_01167519.1| probable pyruvate dehydrogenase E1 component, alpha subunit [Oceanospirillum sp. MED92] gi|89081180|gb|EAR60414.1| probable pyruvate dehydrogenase E1 component, alpha subunit [Oceanospirillum sp. MED92] Length = 360 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 91/337 (27%), Positives = 160/337 (47%), Gaps = 17/337 (5%) Query: 31 VDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEA 90 +DC +P + +E + L Y M+L R+F+ KA L G +G + L +G E Sbjct: 10 LDCEGVPTQALPKWAE-EPDWFLKCYHFMVLARQFDTKAIALQRTGQLGTYASL-LGSEG 67 Query: 91 VIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK 150 + V + +S+ D ++ YR H AC + + + GG +G Sbjct: 68 IDVPVALSMQSDDVLVPYYRNH----ACQIIRGLPLEDAFLYWGGDERGNAAIEMGKDFP 123 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 N + Q G+A A K + V GDG ++G E+ NIA +W+L Sbjct: 124 NAV-----PIATQSLHACGVATAMKINNLKQATVTFIGDGGTSKGDFMEALNIAGVWHLP 178 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 V+++I NNQ+A+ SA + + ++ IPG+QVDG D+ A++ ++A+ Sbjct: 179 VVFIINNNQWAISVPREIQSAANALADKAIAAGIPGIQVDGNDVIAMREATNQALQRAYE 238 Query: 271 HKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD- 328 KGP +IE ++YR H+ +D A YR +E+ + + +PI+++R +++ W E Sbjct: 239 GKGPTLIEAVSYRLCDHTTADDATRYRDNDEL-KAAWHREPIKRLRGHMVNQGWWDEEKE 297 Query: 329 ---LKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 L EI V+K +N ++ A E +Y+++ Sbjct: 298 KALLHEINKTVQKSADNYIKMAPQAVESFFDHMYAEL 334 >gi|229916238|ref|YP_002884884.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Exiguobacterium sp. AT1b] gi|229467667|gb|ACQ69439.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Exiguobacterium sp. AT1b] Length = 335 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 94/310 (30%), Positives = 150/310 (48%), Gaps = 7/310 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 K+ L+ Y M+ R+ +E+ +L G + F C GQEA VG +L +G D + Sbjct: 14 LTKQDLLAMYETMVRARKIDERMWKLNRAGKIP-FVVSCQGQEAAQVGAAFALEKGIDYV 72 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR+ +L G + +M + + S G+ H S + G V QV Sbjct: 73 LPYYRDVAVVLHFGQTSRDLMLSAFAKAEDPNSGGRQMPGHFGSKAHRIVTGSSPVTTQV 132 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 GIA A K ++ + + V FG+G++NQG +E N A + L VI ENN+YA+ Sbjct: 133 PHAVGIALAAKMKKEELVTFVSFGEGSSNQGDFHEGANFAGVHKLPVILFCENNKYAISV 192 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +++ A S R + +PG+ VDG D AV A + +A +GP +IE R Sbjct: 193 PLTKQLACERVSDRAKGYGMPGVTVDGTDPIAVYAVVKEARERALRGEGPTLIEAEVERL 252 Query: 285 RGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 HS D YR+ EE+ ++ D I+ R+RL+++ A+ L EI+ + +N + Sbjct: 253 VPHSSDDDDKAYRSAEELAGLK-ERDGIQLFRQRLVNDGIATAETLAEIDAQIDAEVNEA 311 Query: 344 VEFAQSDKEP 353 +A DK P Sbjct: 312 TTYA--DKAP 319 >gi|308397290|ref|ZP_07492474.2| dehydrogenase [Mycobacterium tuberculosis SUMu012] gi|308366938|gb|EFP55789.1| dehydrogenase [Mycobacterium tuberculosis SUMu012] Length = 323 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 83/299 (27%), Positives = 143/299 (47%), Gaps = 4/299 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M ++R + QL G++ G GQEAV VG +L EGD +IT +R H Sbjct: 9 YRRMWVLRLLDMALEQLRIEGLINGPLQGGFGQEAVSVGAAAALGEGDVIITTHRPHAQH 68 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + ++A++ G G +G H+ + G +V L G A+A Sbjct: 69 VGTDAPLGPVIADMLGATAGDLEGADEDAHIADPRAGLPAAIRVVKQSPLLAIGHAYALW 128 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R + ++ + D + E+ ++AA+W L V+ ++EN + A+ + R + + Sbjct: 129 LRDTGRVTLCVTQDCDVDADAFNEAADLAAVWQLPVVILVENIRGALSVHLDRYTHEPRV 188 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 +R V++ +PG+ VDG D+ AV+ + AV RA GP +++ +TYR S SD Y Sbjct: 189 YRRAVAYGMPGVSVDGNDVEAVRDCVANAVVRARAGGGPTLVQAITYRTTDFSGSDRGGY 248 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 R ++ DP+ R+RL+ + G L E E + + ++V FA++ P+ Sbjct: 249 R---DLAGSEQFLDPLIFARRRLIAAG-TTRGRLDEQERAACQQVADAVAFAKARARPN 303 >gi|328862361|gb|EGG11462.1| hypothetical protein MELLADRAFT_46840 [Melampsora larici-populina 98AG31] Length = 346 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/296 (27%), Positives = 151/296 (51%), Gaps = 13/296 (4%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAE-LTGRQGGISKG 139 F G+EA +VG + + D + YRE G +L G +MA+ + SKG Sbjct: 12 FYMTSYGEEASVVGSSAAWNQDDVVFAQYREQGVLLWRGCSLDYLMAQCFSTHSDQSSKG 71 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA-------NKYRRSD--KICVVCF-GD 189 + +H S + FY +G Q+ +G A++ K + D K CVVC+ G+ Sbjct: 72 RQMPVHYSSKAHNFYSISSPLGTQIPQSSGAAYSLKRDINLKKIKNDDNQKRCVVCYIGE 131 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 GAA++G + N+A++ +++ I NN +A+ T ++ + R + + I ++V Sbjct: 132 GAASEGDFHAGVNMASVLGGPIVFFIRNNGFAISTPSNQQFKGDGIASRAIGYGIKAIRV 191 Query: 250 DGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSN 307 DG D AV +A +G PI++E +TYR HS SD ++ YR R E++E R Sbjct: 192 DGNDPIAVYLACKEARRLAIQGEGEPILVEAMTYRVGHHSTSDDSSAYRNRSEVDEWRKK 251 Query: 308 HDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +P++++R+ L H W + K++ + + I+ S + A+ +P+ +++++D+ Sbjct: 252 DNPVDRMRRFLEHQTWWNSTKEKDLIDSWKSKISKSTKLAEKAFKPEISQMWTDVF 307 >gi|116805224|gb|ABK27661.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Lactobacillus paracasei] Length = 316 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 86/300 (28%), Positives = 145/300 (48%), Gaps = 23/300 (7%) Query: 60 LLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACG 119 L R +++A L G +G F G+EA ++G ++ D ++ AYR+ ++ G Sbjct: 2 LWQRVLDQRATALNRQGRLG-FYAPSAGEEASMIGSHSAMKTTDWLLPAYRDLPQLIQHG 60 Query: 120 VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 + K G G + H + I+GAQ G+A K S Sbjct: 61 LPLDKAFLWSRGHVAGNEYPE--DFHALPPQI-------IIGAQYVQTAGVALGLKKNGS 111 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 D++ GDG +QG YE N A + I+++++N +A+ + +A +++ Sbjct: 112 DEVAFTYTGDGGTSQGDFYEGVNFAGHFKAPAIFIVQDNGFAISVPRASQTAAKTLAQKA 171 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRT 297 V+ IPG+QVDGMD AV +A A+ A GP++IE LTYRY H++S DP YR+ Sbjct: 172 VAAGIPGVQVDGMDALAVYEVTKEARAWTAAGNGPVLIETLTYRYGPHTLSGDDPTRYRS 231 Query: 298 REEINEMRSNHDPIEQVRKRL----LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + E +E+ DP+ ++R L L NK + + +++ ++ IN ++DK P Sbjct: 232 K-ETDELWQKRDPLIRMRNYLTDKGLWNKDKEDALIDQVKDEIKDAIN------KADKAP 284 >gi|313680637|ref|YP_004058376.1| branched-chain alpha-keto acid dehydrogenase e1 component [Oceanithermus profundus DSM 14977] gi|313153352|gb|ADR37203.1| branched-chain alpha-keto acid dehydrogenase E1 component [Oceanithermus profundus DSM 14977] Length = 369 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/249 (28%), Positives = 124/249 (49%), Gaps = 4/249 (1%) Query: 81 FCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 F G E + + + ++ G D + YR+HG +LA GV A +I E + +KG Sbjct: 66 FAMEAAGHEGIQIAIAHTVKRGFDWLFPYYRDHGMLLALGVPAVEIFGETLATRADPAKG 125 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + H S + + + + TG A + K + + ++ V FGDGA ++G + Sbjct: 126 RQMPNHPGSKPLNAFTVASPIASHIPPATGAAISAKIQGTGQVVVTTFGDGATSEGDWHA 185 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 N A+ V++V+ENN+YA+ + + + N + + ++ +PG +DGMD+ A Sbjct: 186 GVNFASAQGAPVVFVVENNRYAISVDLQKQTGSENLAVKAKAYGMPGYYLDGMDVLASYY 245 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 M + + RA GP ++E + YRY HS +D YR +EE+ + DP+E+ R+ L Sbjct: 246 VMQEVIERTRAGAGPALVEAVVYRYGPHSSADDDRLYRPKEEVEHWK-QRDPLERYRRFL 304 Query: 319 LHNK-WASE 326 + W E Sbjct: 305 ERQELWTPE 313 >gi|297566265|ref|YP_003685237.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Meiothermus silvanus DSM 9946] gi|296850714|gb|ADH63729.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Meiothermus silvanus DSM 9946] Length = 346 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/271 (29%), Positives = 130/271 (47%), Gaps = 12/271 (4%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F E+ LS YR + R F+E+A L G +G + GQEA VG+ ++L + D ++ Sbjct: 21 FPPEKLLSGYRALRRARHFDERALVLQRQGKLGVYPPFR-GQEAAQVGVALALEKTDWLV 79 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +YRE L G+ + + G +G + F + Q+ Sbjct: 80 PSYRETAAALTHGLPIATTILYWRADPSGWRFPEGVRILPFYIP---------IATQIPQ 130 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A A KY + + GDG ++G +E N A+++ V++V++NN +A+ Sbjct: 131 AVGVAQAGKYHGENWVVAAFIGDGGTSEGDFHEGLNFASVFGAPVVFVVQNNGWAISVPT 190 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + + R + IPG+ VDG D+ AV +AV R+ GP ++E LTYR Sbjct: 191 EKQMKVRRVASRAQGYGIPGVVVDGNDLVAVWKAAQEAVERARSGGGPTLLEALTYRIAP 250 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRK 316 H+ S DP YRT EE E+ DP+ ++R+ Sbjct: 251 HTSSDDPGRYRT-EEQTEVWKRKDPVMRMRR 280 >gi|145298469|ref|YP_001141310.1| pyruvate dehydrogenase E1 component, alpha subunit [Aeromonas salmonicida subsp. salmonicida A449] gi|142851241|gb|ABO89562.1| pyruvate dehydrogenase E1 component, alpha subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 364 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 97/346 (28%), Positives = 160/346 (46%), Gaps = 39/346 (11%) Query: 34 VDIPFL-----EGFEVSEF----NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-CH 83 VDIPFL EG V+ +K + YR M+++R +++KA L G +G F H Sbjct: 4 VDIPFLRYLDEEGRPVATLPTWLDKAILHTFYRNMVMVRSYDKKAIALQRTGKLGTFPSH 63 Query: 84 LCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGS 143 L G EAV +G+ +++ E D + YR+ + GV K + G + G Sbjct: 64 L--GAEAVGIGVGLAMQEQDVYVPYYRDMPTLYVRGVPMEKNLQYWGGDERG-------- 113 Query: 144 MHMFSTKNGFYGGHG----------IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 + FY G + Q++ GIA A K R ++ VV GDG + Sbjct: 114 -------SVFYKADGELSEDLPICVPIATQITHAAGIAAAFKLRNQPRVAVVTIGDGGTS 166 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 +G E N A +W+L ++ +I NNQ+A+ S+ +++GV + +QVDG D Sbjct: 167 KGDFLEGLNCAGVWHLPMVMIINNNQWAISVPRKLQSSAPTLAQKGVGAGVRSIQVDGND 226 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIE 312 + AV AV R+ KGP +IE ++YR H+ +D A YR E+ E +P++ Sbjct: 227 VVAVYDATRIAVERARSGKGPTLIEAISYRLGDHTTADDATRYRDAAEV-EAAWAKEPVK 285 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 ++R+ + W E + + + ++ +V +S P L Sbjct: 286 RLRQFMFEQGWWDEHQEQALLAEASREVDRAVAAYESTAPQAPETL 331 >gi|163756882|ref|ZP_02163990.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Kordia algicida OT-1] gi|161323118|gb|EDP94459.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Kordia algicida OT-1] Length = 688 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/267 (28%), Positives = 134/267 (50%), Gaps = 2/267 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 +S Y+ ML R EEK L G + + IGQEA+ VG+ +LT+ + ++ +R Sbjct: 44 ISLYKKMLKPRMIEEKMLILLRQGKISKWFG-GIGQEAIAVGVTSALTKDEYVLPMHRNL 102 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G + ++ ++ G+ G + G+ S H + + G +G Q+ + +GIA Sbjct: 103 GVFTTREIPLYRLFSQWQGKANGFTNGRDRSFHFGTQEFNIVGMISHLGPQLGVASGIAL 162 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 ANK + + C V G+G ++G +E+ N+A++W+L V++ IENN Y + T S Sbjct: 163 ANKLKENKHACAVFTGEGGTSEGDFHEALNVASVWSLPVLFCIENNGYGLSTPTSEQYNC 222 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + + RG + + +DG +I V + + R + PI++E T+R RGH + Sbjct: 223 EHLADRGKGYGMESHVIDGNNILEVYTKVSELADSIRENPRPILLEFKTFRMRGHEEASG 282 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLL 319 Y +E ++ + DPI+ R L+ Sbjct: 283 TKYVPKELMDRWAAK-DPIDMYRNFLM 308 >gi|119718728|ref|YP_925693.1| pyruvate dehydrogenase (acetyl-transferring) [Nocardioides sp. JS614] gi|119539389|gb|ABL84006.1| Pyruvate dehydrogenase (acetyl-transferring) [Nocardioides sp. JS614] Length = 398 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 90/319 (28%), Positives = 144/319 (45%), Gaps = 21/319 (6%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M+L RR + +A L G +G + L +GQEA +G +L D + YREH Sbjct: 61 LGFYRDMVLTRRIDTEATALQRHGELGIWAQL-LGQEAAQIGAGRALRPQDFVFPTYREH 119 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G G+D ++ G G K + +++ ++GAQ TG A Sbjct: 120 GVAWCRGIDPLDLLGLFRGVDQGSWDPKDKNFGLYTI---------VIGAQTLHATGYAM 170 Query: 173 ANKY--------RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + D + FGDGA++QG V ESF AA +N V++ +NNQ+A+ Sbjct: 171 GMQRDGVVGTGDPDRDAAVIAHFGDGASSQGDVNESFVFAASYNAPVVFFCQNNQWAISE 230 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 R S + +R + F PG++VDG D+ A A A+ R +GP +E TYR Sbjct: 231 PFERQS-RIPLYQRALGFGFPGVRVDGNDVLATYAVTQAALDRARDGQGPTFVEAYTYRM 289 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 H+ + DP YR +++ + DPI +V L N A + ++ + Sbjct: 290 GAHTTTDDPTRYRLSDDLERWKLK-DPIARVEAYLRRNGIADDAFFAGVQEEAADLGVRL 348 Query: 344 VEFAQSDKEPDPAELYSDI 362 E ++ +P P ++ + Sbjct: 349 REGCRALPDPSPLSIFDHV 367 >gi|217966831|ref|YP_002352337.1| transketolase [Dictyoglomus turgidum DSM 6724] gi|217335930|gb|ACK41723.1| Transketolase central region [Dictyoglomus turgidum DSM 6724] Length = 791 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/384 (26%), Positives = 170/384 (44%), Gaps = 74/384 (19%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQL------YG--MGMVGGFCHLCIGQEAVIVGMKMSL 99 KE+ + ++ ML+IR FEE +L YG + G HL IGQEAV G + Sbjct: 41 TKEESIDLFKCMLMIRNFEEMIYELRVNKGKYGNIRYLYIGATHLSIGQEAVPTGGISVI 100 Query: 100 TEGDQMITAYREHGHILA------------------------------------------ 117 + D + + +R HG +A Sbjct: 101 KKDDYITSTHRGHGDAIAKSYFGLKDMSEEELIAFIENNKEIANFLGYDWKNKNKNILYQ 160 Query: 118 --CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 ++ K + EL G++ G +G+GGSMH+ G G + IVG + + G A A++ Sbjct: 161 YALDIELFKAIGELFGKEWGACRGRGGSMHIADFSVGHLGANAIVGGSMGIAVGSAMASR 220 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAAL-----------WNLNVIYVIENNQYA-MG 223 Y ++ + GDGA N G +E+ N+A + + + VI+++ NNQY G Sbjct: 221 YMEDGRVTLCFIGDGAMNTGIAHEAINMACMAQFTNGLMSKKFGVPVIFMVMNNQYGESG 280 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 + ++RG +++ GM V+ M++ AV+ + +AV R +GP+++E Sbjct: 281 QQRGEVTGIDFIAERGFAYSKNGMHAEVVNAMNVLAVRDAVKRAVERIRKGEGPVLLEFW 340 Query: 281 TYRYRGHSMSD----PAN--YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 YR+ GHS+SD P N YRT E+ + +DP+E K L+ + +++ ++ Sbjct: 341 GYRFMGHSLSDTLEKPENGTYRTYNELQAWK-KYDPLEIYAKELIDAGVLTPHEIENLKK 399 Query: 335 NVRKIINNSVEFAQSDKEPDPAEL 358 R+ N PDP ++ Sbjct: 400 EYRQRNENIAAKVIESPNPDPKDM 423 >gi|220917206|ref|YP_002492510.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Anaeromyxobacter dehalogenans 2CP-1] gi|219955060|gb|ACL65444.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Anaeromyxobacter dehalogenans 2CP-1] Length = 397 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 92/314 (29%), Positives = 153/314 (48%), Gaps = 4/314 (1%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYR 110 + L YR M+L R +E+ L G +G F IG+EA ++G ++ E D + YR Sbjct: 53 EALRLYRWMVLNRALDERMITLQRQGRIG-FYIGSIGEEATVLGTAAAMDERDWIYPCYR 111 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 EHG L G+ + +L G G KG+ H F + QVS G Sbjct: 112 EHGAALLRGMPLVTFVCDLFGNGGDAMKGRQMPCHEAWRPGRFTSISSPIATQVSQAMGG 171 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A+A K + + + + FG+GA + + N AA+ + V++V NN +A+ R + Sbjct: 172 AWAAKLKGEEMVAITYFGEGATSAHDFHTGLNFAAVRKIPVVFVCRNNGWAISVPRERQT 231 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A +++ +++ + G +VDG D+ AV A +A A A +GP ++E +TYR GHS S Sbjct: 232 ASETIAQKAIAYGMRGERVDGNDLLAVYAATRRARARAAAGEGPTLLECVTYRIEGHSTS 291 Query: 291 -DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 DP YR E+ E DPI ++R+ L E + +R+ I +++ A++ Sbjct: 292 DDPRAYRP-AELVEPWKRKDPILRMRRYLSRRGALDEAQDAALRDELREQIQAALKEAEA 350 Query: 350 -DKEPDPAELYSDI 362 +P L++D+ Sbjct: 351 FPAKPSIETLFADV 364 >gi|66808173|ref|XP_637809.1| 3-methyl-2-oxobutanoate dehydrogenase [Dictyostelium discoideum AX4] gi|74853510|sp|Q54M22|ODBA_DICDI RecName: Full=2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial; AltName: Full=Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; Short=BCKDE1A; Short=BCKDH E1-alpha; Flags: Precursor gi|60466281|gb|EAL64343.1| 3-methyl-2-oxobutanoate dehydrogenase [Dictyostelium discoideum AX4] Length = 441 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 87/318 (27%), Positives = 147/318 (46%), Gaps = 3/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F+KE+ + Y ML + + + G + F G+EA+ +G +L D + Sbjct: 85 FSKEEVIKMYTTMLTLNVMDSILYDVQRQGRIS-FYMTSFGEEAIHIGSAAALEMSDTIF 143 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YRE G + G + I+ + + + KG+ MH S K + Q+ Sbjct: 144 AQYRETGVFMWRGFTINDIINQCCTNEHDLGKGRQMPMHFGSRKINLQTISSPLTTQLPQ 203 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G ++A K +V FG+GAA++G + + N AA + I+ NN++A+ T Sbjct: 204 AVGSSYAQKLAGEKNCTIVYFGEGAASEGDFHAAMNFAAALSTPTIFFCRNNKWAISTPS 263 Query: 227 SRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + RG + + + ++VDG DI AV A + P++IE +TYR Sbjct: 264 KEQYKGDGIAGRGPNGYGMKTIRVDGNDIWAVYNVTKLARKIAVEEQVPVLIEAMTYRVG 323 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HS SD ++ YRT EEIN + +PI ++R + H W S+ KE N R + S+ Sbjct: 324 HHSTSDDSSRYRTVEEINAWKEGKNPISRLRNYMNHKGWWSDAQEKETIANARTTVRESL 383 Query: 345 EFAQSDKEPDPAELYSDI 362 A+ +P E+++D+ Sbjct: 384 VNAEKQYKPSINEIFTDV 401 >gi|195444749|ref|XP_002070011.1| GK11824 [Drosophila willistoni] gi|194166096|gb|EDW80997.1| GK11824 [Drosophila willistoni] Length = 439 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 93/327 (28%), Positives = 152/327 (46%), Gaps = 4/327 (1%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 +E + + KE +R MLL+ ++ + G + F G+EA +G + Sbjct: 81 IEESQDPKLEKEVVEKMFRDMLLLNTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAA 139 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L D + YRE G ++ G + + + G + +GK +H S + F Sbjct: 140 LELRDIIYGQYREAGVLVWRGFRIDQFIDQCYGNDDDMGRGKQMPVHYGSKELNFVTISS 199 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + Q+ G A+A K R + CVVC FG+GAA++G + +FN AA + VI N Sbjct: 200 PLSTQMPQAVGAAYALKRRPDNDACVVCYFGEGAASEGDAHAAFNFAATLSCPVILFCRN 259 Query: 218 NQYAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N +A+ T + RG + + I ++VDG D+ AV M A Y PI+ Sbjct: 260 NGFAISTPSREQYRGDGIAGRGPAGYGITTIRVDGTDVFAVYNAMKAAREYVLRENKPIL 319 Query: 277 IEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 E L YR HS SD + YR EEI S PI ++++ ++H W +E + E N Sbjct: 320 FEALAYRVGHHSTSDDSTAYRPAEEIEVWNSVEHPISKLKRYMVHKGWFNEEEETEFIKN 379 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 VRK + + ++ +P+ E++ D+ Sbjct: 380 VRKQVLKQISVSEKKLKPNWREMFEDV 406 >gi|313884439|ref|ZP_07818200.1| pyruvate dehydrogenase E1 component, alpha subunit [Eremococcus coleocola ACS-139-V-Col8] gi|312620223|gb|EFR31651.1| pyruvate dehydrogenase E1 component, alpha subunit [Eremococcus coleocola ACS-139-V-Col8] Length = 368 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 97/339 (28%), Positives = 156/339 (46%), Gaps = 20/339 (5%) Query: 28 TSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIG 87 T SV D L+ V E+ + M+ R +E+ L G +G + G Sbjct: 23 TVSVLDKDGKILDQKTVDSLTDEELVKIMEYMVWARTLDERTIILNRQGALGNYAPAG-G 81 Query: 88 QEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMF 147 QEA + +L +GD YR+ G + G+ K G G + F Sbjct: 82 QEASQIATMAALHDGDFFAPTYRDVGALTLHGLPLYKGFLWYKGHVAG---------NQF 132 Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 + IVG + G+A + + + + + GD A +QG YE N A ++ Sbjct: 133 DEDFQAFVPQVIVGGTILPAAGVAMGYQRQGKENVVMAYCGDAATSQGDFYEGINFAGVY 192 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 +I +I+NN+Y + +S+ + +++GVS I +QVDGMD A+ AT+ +A Y Sbjct: 193 KAPLITIIQNNRYGISVPISKQTKAETLAQKGVSVGIASVQVDGMDPLAMYATVKQAREY 252 Query: 268 CRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WA 324 A GP++IE LTYR+ H+MS DP YR +E+ E R+ DP+ ++R L K W Sbjct: 253 ALAGNGPVLIEALTYRFGPHTMSDDPKRYRQDDEVEEWRTK-DPLHRMR-VFLKGKGLWD 310 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 S+ + K +E + + A+ +PA SD+L Sbjct: 311 SDHEEKIVEQCKQDVKEALARMAE-----EPAMKVSDLL 344 >gi|304373303|ref|YP_003856512.1| Pyruvate dehydrogenase E1-alpha subunit [Mycoplasma hyorhinis HUB-1] gi|304309494|gb|ADM21974.1| Pyruvate dehydrogenase E1-alpha subunit [Mycoplasma hyorhinis HUB-1] Length = 366 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 83/289 (28%), Positives = 143/289 (49%), Gaps = 12/289 (4%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E K+Q L AY+ M+L R+ + QL G + F G+EA+ V +L + D Sbjct: 35 TELTKDQLLDAYKWMVLSRQQDTYMTQLQKQGRMLSFAP-NFGEEALQVASAFALKKEDW 93 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 A+R + +LA GV + G++ G G ++ + + Q Sbjct: 94 FAPAFRSNATMLALGVPIKNQLLYWNGQERGSVTPVGVNVLPINIP---------IATQY 144 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 S GIA+A K + + + G+G +G+ YE+ NI+++W ++ + NNQ+A+ T Sbjct: 145 SHAAGIAYAAKLQGKKTVAMSIVGNGGTGEGEFYEAMNISSIWKWPAVFTVNNNQWAIST 204 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S +++ + IPG+ VDG D+ A A + +AV + R GP+++E+LT+R Sbjct: 205 PFKYGSGSKTIAQKAEAVWIPGVIVDGNDLLASYAVIKEAVEWAREGNGPVLVELLTWRQ 264 Query: 285 RGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 H+ SD P YRT EE E P ++ K L K+ ++ ++K+I Sbjct: 265 GVHTSSDNPRIYRTEEEEKEHEKWE-PFHRIEKYLKDKKYITDEEIKQI 312 >gi|332293155|ref|YP_004431764.1| dehydrogenase E1 component [Krokinobacter diaphorus 4H-3-7-5] gi|332171241|gb|AEE20496.1| dehydrogenase E1 component [Krokinobacter diaphorus 4H-3-7-5] Length = 667 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 4/320 (1%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 IPF+ + + + + L YR ML R EE+ L G V + IGQEA+ VG+ Sbjct: 9 IPFI--YNRASLDNDTLLRLYRAMLKPRLIEERMLILLRQGKVSKWFS-GIGQEAISVGV 65 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 ++ + ++ +R G + ++ + G+ G +KG+ S H + + G Sbjct: 66 TAAMKPEEYILPMHRNLGVFTTREIPLYRLFTQWQGKMSGFTKGRDRSFHFGTQEFNIVG 125 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 +G Q+ + GIA A+K R + + V G+G ++G +E+ N+A++W L V++ I Sbjct: 126 MISHLGPQLGVADGIALAHKLRNENAVTAVFTGEGGTSEGDFHEALNVASVWQLPVLFCI 185 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENN Y + T S + + R + + +DG +I + + R + P+ Sbjct: 186 ENNGYGLSTPTSEQYNCEHLADRAKGYGMESHIIDGNNILEIYTKILAIAEDIRNNPRPV 245 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +IE T+R RGH + Y EE+ E DP+ K L+H S+ E++ Sbjct: 246 LIEFKTFRMRGHEEASGTKY-VPEELMEAWGEKDPLLNFEKYLIHEGILSQETKDAYEVS 304 Query: 336 VRKIINNSVEFAQSDKEPDP 355 +++ I ++ A +++ P Sbjct: 305 IKEEITEHLDKAYAEESITP 324 >gi|332520326|ref|ZP_08396788.1| dehydrogenase E1 component [Lacinutrix algicola 5H-3-7-4] gi|332043679|gb|EGI79874.1| dehydrogenase E1 component [Lacinutrix algicola 5H-3-7-4] Length = 667 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 77/289 (26%), Positives = 141/289 (48%), Gaps = 7/289 (2%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ + + +++ Y+ ML R EEK L G + + IGQEA+ VG+ M++ + Sbjct: 15 TKLSSKTKIALYQAMLKPRLIEEKMLILLRQGKISKWFS-GIGQEAISVGVTMAMHAEEY 73 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 ++ +R G + ++ ++ G+ G +KG+ S H + + G +G Q Sbjct: 74 ILPMHRNLGVFTTRDIPLYRLFSQWQGKANGFTKGRDRSFHFGTQEFNIVGMISHLGPQF 133 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + GIA A+K + +++ V G+G ++G ++E+ N+A++W L V++ IENN Y + T Sbjct: 134 GVADGIALASKLKNKNQVTAVFTGEGGTSEGDIHEALNVASVWQLPVLFCIENNGYGLST 193 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 N + R + + + +DG +I V + K R P++IE T+R Sbjct: 194 PTKEQYNCENLADRALGYGMESHIIDGNNILEVFTKISKITESIRKKPRPVLIEFKTFRM 253 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 RGH + Y +E+ + + DPI+ + LL EG L E E Sbjct: 254 RGHEEASGTKY-VPQELMDQWAKKDPIDNYKLHLLE-----EGILTEKE 296 >gi|199598175|ref|ZP_03211597.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Lactobacillus rhamnosus HN001] gi|229552110|ref|ZP_04440835.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus rhamnosus LMS2-1] gi|258508315|ref|YP_003171066.1| pyruvate dehydrogenase E1 component alpha subunit [Lactobacillus rhamnosus GG] gi|258539525|ref|YP_003174024.1| pyruvate dehydrogenase E1 component subunit alpha [Lactobacillus rhamnosus Lc 705] gi|199590936|gb|EDY99020.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Lactobacillus rhamnosus HN001] gi|229314543|gb|EEN80516.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus rhamnosus LMS2-1] gi|257148242|emb|CAR87215.1| Pyruvate dehydrogenase E1 component alpha subunit [Lactobacillus rhamnosus GG] gi|257151201|emb|CAR90173.1| Pyruvate dehydrogenase E1 component alpha subunit [Lactobacillus rhamnosus Lc 705] gi|259649631|dbj|BAI41793.1| pyruvate dehydrogenase complex E1 component alpha subunit [Lactobacillus rhamnosus GG] Length = 370 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 85/313 (27%), Positives = 152/313 (48%), Gaps = 17/313 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + +Q + M+ R +++A L G +G F G+EA ++G ++ D Sbjct: 40 MPDLSDDQLVDLMSKMVWQRVLDQRATALNRQGRLG-FYAPSAGEEASMIGSHAAMKSSD 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ AYR+ ++ G+ K G G + H + I+GAQ Sbjct: 99 WLLPAYRDLPQLIQHGLPLDKAFLWSRGHVAGNEYPE--DFHALPPQI-------IIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K SD++ GDG +QG YE N A + ++++++N +A+ Sbjct: 150 YVQTAGVALGLKKNGSDEVAFTYTGDGGTSQGDFYEGVNFAGHFKAPALFIVQDNGFAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + +A +++ V+ +PG+QVDGMD AV +A A+ A GP++IE LTYR Sbjct: 210 VPRASQTAAKTLAQKAVAAGVPGVQVDGMDALAVYEVTKEARAWAAAGNGPVLIETLTYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKII 340 Y H++S DP YR++ E +E+ DP+ ++R L W+ + + IE V+ I Sbjct: 270 YGPHTLSGDDPTRYRSK-ETDELWQKRDPLIRMRNYLTDKGLWSKDKEDALIE-KVKDEI 327 Query: 341 NNSVEFAQSDKEP 353 +++ ++DK P Sbjct: 328 KDAIN--KADKAP 338 >gi|32141217|ref|NP_733618.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces coelicolor A3(2)] gi|24427172|emb|CAD55333.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces coelicolor A3(2)] Length = 388 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 79/308 (25%), Positives = 145/308 (47%), Gaps = 12/308 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y ++ RR+ +A L G + + GQEA + ++L E D + +YR+ + Sbjct: 54 YARLVRGRRYNAQATALTKQGRLAVYPS-STGQEACEIAAALALEERDWLFPSYRDTLAV 112 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 ++ GVD + + L +G G H + + + Q+ G+A A + Sbjct: 113 VSRGVDPVEALTLL---RGDWHTGYDPYEHRVAPLST------PLATQLPHAVGLAHAAR 163 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + D + + GDG ++G +E+ N AA+W V+++++NN +A+ + + +A + Sbjct: 164 LKGDDVVALAMVGDGGTSEGDFHEALNFAAVWRAPVVFLVQNNGFAISVPLDKQTAAPSL 223 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 + + V + +PG VDG D AV + AV + RA GP ++E +TYR H+ +D A Sbjct: 224 AHKAVGYGMPGRLVDGNDAAAVHEVLSDAVRHARAGGGPTLVEAVTYRVDAHTNADDATR 283 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR E+ R HDP+E + + L E ++ + + + D E D Sbjct: 284 YRGDAEVETWR-RHDPVELLERELTERGLLDEDGIRAAREDAETMAADLRARMNQDPELD 342 Query: 355 PAELYSDI 362 P EL++ + Sbjct: 343 PLELFAHV 350 >gi|300710362|ref|YP_003736176.1| 2-oxoacid dehydrogenase E1 component alpha subunit [Halalkalicoccus jeotgali B3] gi|299124045|gb|ADJ14384.1| 2-oxoacid dehydrogenase E1 component alpha subunit [Halalkalicoccus jeotgali B3] Length = 349 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 89/323 (27%), Positives = 161/323 (49%), Gaps = 16/323 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ ++E+ + YR M+ RRF+E+A L G + G+ GQEA VG ++ E D Sbjct: 12 ATDIDEERARALYRDMVRARRFDERAIALQRRGWMSGYPPFA-GQEASQVGAAHAMAERD 70 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR++ +A GV S + R+G + S H T + +Q Sbjct: 71 WLVPTYRQNATQIARGVPMSDL---FRFRRG---HPEFASDHDLPTLPQTVP----IASQ 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+ A YR + + CFGDGA ++G +E+ N A +++ ++ ENN +A+ Sbjct: 121 LPHAVGLGMAIDYRDDEGAVLCCFGDGATSEGDFHEALNFAGVFSTPTVFFCENNGWAIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 R +A + + + ++ I G +VDG D AV A + +A++ R + P++IE LTYR Sbjct: 181 LPQERQTASDSIAIKADAYGITGTRVDGNDPLAVYAVVREALSKAREGE-PVLIESLTYR 239 Query: 284 YRGHSMS-DPANYRTRE--EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 H+ S DP+ YR+ + ++ E R+ DP+E+ L ++ +E + + + Sbjct: 240 RGAHTTSDDPSRYRSEDAADLPEWRTA-DPLERYETYLREEGLLDGAFVEGVEADADEEL 298 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 +VE A+S E P ++ + Sbjct: 299 RGAVERAESGSEARPEAVFDTVF 321 >gi|226309471|ref|YP_002769433.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Rhodococcus erythropolis PR4] gi|226188590|dbj|BAH36694.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Rhodococcus erythropolis PR4] Length = 375 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 82/265 (30%), Positives = 131/265 (49%), Gaps = 14/265 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M L RRF+++A L G + + GQEA + MSL D + YR+ + Sbjct: 50 YRKMFLGRRFDQQATALTKQGRLAVYPS-SRGQEACQIAAAMSLEPSDWLFPTYRDSMAL 108 Query: 116 LACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 A GVD +I++ L G G S + + Q+ G+A+ Sbjct: 109 AARGVDPVQILSMLAGDWHCGYDPVALRSAPQCTP----------LATQLLHAAGVAYGE 158 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 R + + + GDGA ++G +E+ N AA++ V+++++NN +A+ +SR SA Sbjct: 159 SRRGLNTVALALCGDGATSEGDFHEALNFAAVFKAPVVFLVQNNGFAISVPLSRQSAAPT 218 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + +GV + I QVDG D A+ A MD+A + R+ GP+I+E TYR H+ +D A Sbjct: 219 LAHKGVGYGIGSEQVDGNDPVAMMAVMDEAARFVRSGNGPVIVEAHTYRIDAHTNADDAT 278 Query: 295 -YRTREEINEMRSNHDPIEQVRKRL 318 YR E+ R DP+ ++ K L Sbjct: 279 RYRDSAEVESWR-GRDPLPRLEKYL 302 >gi|330723823|gb|AEC46193.1| pyruvate dehydrogenase E1-alpha subunit [Mycoplasma hyorhinis MCLD] Length = 366 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 83/289 (28%), Positives = 142/289 (49%), Gaps = 12/289 (4%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E K+Q L AY+ M+L R+ + QL G + F G+EA+ V +L + D Sbjct: 35 TELTKDQLLDAYKWMVLSRQQDTYMTQLQKQGRMLSFAP-NFGEEALQVASAFALKKEDW 93 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 A+R + +LA GV + G++ G G ++ + + Q Sbjct: 94 FAPAFRSNATMLALGVPIKNQLLYWNGQERGSVTPVGVNVLPINIP---------IATQY 144 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 S GIA+A K + + + G+G +G+ YE+ NI+++W ++ + NNQ+A+ T Sbjct: 145 SHAAGIAYAAKLQGKKTVAMSIVGNGGTGEGEFYEAMNISSIWKWPAVFTVNNNQWAIST 204 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S +++ + IPG+ VDG D+ A A + +AV + R GP+++E LT+R Sbjct: 205 PFKYGSGSKTIAQKAEAVGIPGVIVDGNDLLASYAVIKEAVEWARGGNGPVLVEFLTWRK 264 Query: 285 RGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 H+ SD P YRT EE E P ++ K L K+ ++ ++K+I Sbjct: 265 GVHTSSDNPRIYRTEEEEKEHEKWE-PFHRIEKYLKDKKYITDEEIKQI 312 >gi|46134201|ref|XP_389416.1| hypothetical protein FG09240.1 [Gibberella zeae PH-1] Length = 449 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 87/291 (29%), Positives = 138/291 (47%), Gaps = 8/291 (2%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 F + G+EAV +G L D M T YRE G G A M +L G S+G Sbjct: 119 SFYMVSAGEEAVSIGSSSVLDREDVMFTQYREQGVFKERGFTAKDFMGQLFGNVRDPSRG 178 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAAN 193 + +H S + + + Q+ +G A+A K ++ ++ V FG+GAA+ Sbjct: 179 RSMPVHYGSKELNIHSVSSPLATQLPHASGAAYALKMQKLQNPSSKARVAVAYFGEGAAS 238 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 +G + + NIAA I++ NN YA+ T + RG+ + I ++VDG D Sbjct: 239 EGDFHAALNIAATRACPAIFICRNNGYAISTPTLDQYRGDGIASRGIGYGIDTIRVDGND 298 Query: 254 IRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPI 311 I AV+ + KA G PI+IE +TYR HS SD + YR R E+ + + +PI Sbjct: 299 IWAVREVVKKAREMALEDGGKPILIEAMTYRVSHHSTSDDSFAYRARVEVEDWKRRDNPI 358 Query: 312 EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++RK + E KE ++RK I + A+ +K+P ++ D+ Sbjct: 359 TRLRKWMEAQGIWDEAKEKEARTDLRKEILKAFSEAEREKKPPMRSMFEDM 409 >gi|197122439|ref|YP_002134390.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Anaeromyxobacter sp. K] gi|196172288|gb|ACG73261.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Anaeromyxobacter sp. K] Length = 397 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 92/314 (29%), Positives = 153/314 (48%), Gaps = 4/314 (1%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYR 110 + L YR M+L R +E+ L G +G F IG+EA ++G ++ E D + YR Sbjct: 53 EALRLYRWMVLNRALDERMITLQRQGRIG-FYIGSIGEEATVLGTAAAMDERDWIYPCYR 111 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 EHG L G+ + +L G G KG+ H F + QVS G Sbjct: 112 EHGAALLRGMPLVTFVCDLFGNGGDAMKGRQMPCHEAWRPGRFTSISSPIATQVSQAMGG 171 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A+A K + + + + FG+GA + + N AA+ + V++V NN +A+ R + Sbjct: 172 AWAAKLKGEEMVAITYFGEGATSAHDFHTGLNFAAVRKIPVVFVCRNNGWAISVPRERQT 231 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A +++ +++ + G +VDG D+ AV A +A A A +GP ++E +TYR GHS S Sbjct: 232 ASETIAQKAIAYGMRGERVDGNDLLAVYAATRRARARAAAGEGPTLLECVTYRIEGHSTS 291 Query: 291 -DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 DP YR E+ E DPI ++R+ L E + +R+ I +++ A++ Sbjct: 292 DDPRAYRP-AELVEPWKRKDPILRMRRYLSRRGALDEAQDAALRDELREQIQAALKEAEA 350 Query: 350 -DKEPDPAELYSDI 362 +P L++D+ Sbjct: 351 FPAKPAIETLFADV 364 >gi|300709827|ref|YP_003735641.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Halalkalicoccus jeotgali B3] gi|299123510|gb|ADJ13849.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Halalkalicoccus jeotgali B3] Length = 380 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 153/321 (47%), Gaps = 18/321 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + E YR M RRF+E+ L G +G + L GQE +G +L +GD Sbjct: 39 VPDLPPETLERMYRDMRFCRRFDERMISLQRQGRMGTYSSLA-GQEGAQIGSTYALADGD 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YREHG ++ G+ ++ + G + G ++ + + G + H + Sbjct: 98 VLSYQYREHGALVPRGMPWEYLLYWM-GHEAGNARLADLDVLPLNITIGDHLPHAV---- 152 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A+A K DK V FGDGA ++G +E+ N A +++ ++V NN +A+ Sbjct: 153 -----GYAWAAKLDGDDKATVAHFGDGATSEGDFHEAMNFAGVFDTPSVFVCNNNGWAIS 207 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV----KATMDKAVAYCRAHKGPIIIEM 279 R + + + ++ G+QVDGMD A+ KA KA+ + P +IE Sbjct: 208 IPRERQTMSETLAGKAAAYGFEGVQVDGMDPLAMYAVTKAARQKALDPDESEARPTLIEA 267 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + YRY H+ + DP+ YR E+ E R DPI++ + L + + E+E + Sbjct: 268 VQYRYGAHTTADDPSMYRDDAEVEEWRQK-DPIDRFERFLRDEGVLDDDRIAEMEEGIEA 326 Query: 339 IINNSVEFAQSDKEPDPAELY 359 I + ++ A+ + E DP+E++ Sbjct: 327 SITDLIDRAE-EYEADPSEMF 346 >gi|256786661|ref|ZP_05525092.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces lividans TK24] gi|289770556|ref|ZP_06529934.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces lividans TK24] gi|289700755|gb|EFD68184.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces lividans TK24] Length = 388 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 79/308 (25%), Positives = 145/308 (47%), Gaps = 12/308 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y ++ RR+ +A L G + + GQEA + ++L E D + +YR+ + Sbjct: 54 YARLVRGRRYNAQATALTKQGRLAVYPS-STGQEACEIAAALALEERDWLFPSYRDTLAV 112 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 ++ GVD + + L +G G H + + + Q+ G+A A + Sbjct: 113 VSRGVDPVEALTLL---RGDWHTGYDPYEHRVAPLST------PLATQLPHAVGLAHAAR 163 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + D + + GDG ++G +E+ N AA+W V+++++NN +A+ + + +A + Sbjct: 164 LKGDDVVALAMVGDGGTSEGDFHEALNFAAVWRAPVVFLVQNNGFAISVPLDKQTAAPSL 223 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 + + V + +PG VDG D AV + AV + RA GP ++E +TYR H+ +D A Sbjct: 224 AHKAVGYGMPGRLVDGNDAAAVHEVLSDAVRHARAGGGPTLVEAVTYRVDAHTNADDATR 283 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR E+ R HDP+E + + L E ++ + + + D E D Sbjct: 284 YRGDAEVETWR-RHDPVELLERELTERGLLDEDGIRAAREDAETMAADLRARMNQDPELD 342 Query: 355 PAELYSDI 362 P EL++ + Sbjct: 343 PLELFAHV 350 >gi|256384125|gb|ACU78695.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Mycoplasma mycoides subsp. capri str. GM12] gi|256384957|gb|ACU79526.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Mycoplasma mycoides subsp. capri str. GM12] gi|296455650|gb|ADH21885.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 370 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 95/310 (30%), Positives = 158/310 (50%), Gaps = 15/310 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE-GDQMITAYRE 111 L AY++M L RR + + G + F GQEA V +L + D ++ YR Sbjct: 39 LEAYKIMHLSRRQDIYQNTMQRQGRLLSFLS-STGQEACEVAYINALNKKTDHFVSGYRN 97 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 + LA G IM G + G +G + + ++G+Q S TGIA Sbjct: 98 NAGWLAMGQLIRNIMLYWIGNEAGGKAPEGVNC---------LPPNIVIGSQYSQATGIA 148 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 FA KY+++ + V GDG +++G+ YE+ N A L + ++VIENN++A+ T+ S + Sbjct: 149 FAEKYKKTGGVVVTTTGDGGSSEGETYEAMNFAKLHEVPCVFVIENNKWAISTARSEQTK 208 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 NF+ +G++ IP + VDG D A + V Y R GP+++E TYR HS SD Sbjct: 209 SINFAVKGIATGIPSIIVDGNDYLACIGVFKEVVEYVRKGNGPVLVECDTYRLGAHSSSD 268 Query: 292 -PANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINNSVEFAQS 349 P YR + E EM S DP+ ++++ L+ K W+ E + K + + K++ + + + Sbjct: 269 NPDVYRPKGEFEEM-SKFDPLIRLKQYLIDKKVWSDEQEEKLVAEH-DKLVADEFAWVEQ 326 Query: 350 DKEPDPAELY 359 +K D +++ Sbjct: 327 NKNYDLIDIF 336 >gi|29653978|ref|NP_819670.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coxiella burnetii RSA 493] gi|161829872|ref|YP_001596565.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coxiella burnetii RSA 331] gi|29541241|gb|AAO90184.1| pyruvate dehydrogenase E1 component alpha subunit [Coxiella burnetii RSA 493] gi|161761739|gb|ABX77381.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coxiella burnetii RSA 331] Length = 368 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 12/292 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M LIR+ + KA L G +G + GQEAV +GM ++ + D YR+ Sbjct: 39 LYLYRRMALIRQLDNKAINLQRTGKMGTYPS-SRGQEAVGIGMGSAMQKEDIFCPYYRDQ 97 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G + G+ S+I+A G + +G K+ F I G Q+ G+A+ Sbjct: 98 GALFEHGIKLSEILAYWGGDE------RGSRYANPDVKDDFPNCVPIAG-QLLHAAGVAY 150 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A KYR+ + + GDG ++G YE+ N+A W L ++++I NNQ+A+ + + Sbjct: 151 AVKYRKQARAVLTICGDGGTSKGDFYEAINLAGCWQLPLVFIINNNQWAISVARGEQTHC 210 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ G QVDG D+ AV+ + KA+ R GP +IE L+YR H+ +D Sbjct: 211 QTLAQKAIAGGFEGWQVDGNDVIAVRYAVSKALEKARDGGGPTLIEALSYRLCDHTTADD 270 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDL---KEIEMNVRKII 340 A +E ++ +PI ++ L W+ E + KE+ V +++ Sbjct: 271 ATRYIPQEEWKVAWQKEPIARLGYYLESQGLWSREKEAVLQKELAQEVDQVV 322 >gi|16800113|ref|NP_470381.1| hypothetical protein lin1044 [Listeria innocua Clip11262] gi|46907284|ref|YP_013673.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Listeria monocytogenes serotype 4b str. F2365] gi|116872446|ref|YP_849227.1| pyruvate dehydrogenase alpha subunit [Listeria welshimeri serovar 6b str. SLCC5334] gi|226223670|ref|YP_002757777.1| pyruvate dehydrogenase (E1 alpha subunit) [Listeria monocytogenes Clip81459] gi|254823675|ref|ZP_05228676.1| pyruvate dehydrogenase alpha subunit [Listeria monocytogenes FSL J1-194] gi|254853061|ref|ZP_05242409.1| pyruvate dehydrogenase complex [Listeria monocytogenes FSL R2-503] gi|254933400|ref|ZP_05266759.1| pyruvate dehydrogenase complex [Listeria monocytogenes HPB2262] gi|300765903|ref|ZP_07075876.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Listeria monocytogenes FSL N1-017] gi|16413503|emb|CAC96275.1| pdhA [Listeria innocua Clip11262] gi|46880551|gb|AAT03850.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Listeria monocytogenes serotype 4b str. F2365] gi|116741324|emb|CAK20446.1| pyruvate dehydrogenase alpha subunit [Listeria welshimeri serovar 6b str. SLCC5334] gi|225876132|emb|CAS04838.1| Putative pyruvate dehydrogenase (E1 alpha subunit) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258606408|gb|EEW19016.1| pyruvate dehydrogenase complex [Listeria monocytogenes FSL R2-503] gi|293584961|gb|EFF96993.1| pyruvate dehydrogenase complex [Listeria monocytogenes HPB2262] gi|293592897|gb|EFG00658.1| pyruvate dehydrogenase alpha subunit [Listeria monocytogenes FSL J1-194] gi|300513365|gb|EFK40439.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Listeria monocytogenes FSL N1-017] gi|313619526|gb|EFR91203.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Listeria innocua FSL S4-378] gi|328466824|gb|EGF37938.1| pyruvate dehydrogenase (E1 alpha subunit) [Listeria monocytogenes 1816] gi|332311461|gb|EGJ24556.1| Pyruvate dehydrogenase E1 component [Listeria monocytogenes str. Scott A] Length = 371 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 13/262 (4%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 56 MVWTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHYALEKHDYILPGYRDVPQLIWH 114 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ +K G G + F I+GAQ+ G+A K R+ Sbjct: 115 GLPLTKAFLFSRGHFVG---------NQFPEDLNVLSPQIIIGAQIVQAAGVALGLKKRK 165 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 D + + GDG ++QG YE N A ++ I+V++NN++A+ T + SA +++ Sbjct: 166 KDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNNKFAISTPREKQSAAETLAQK 225 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ IPG+QVDGMD AV A A A +GP +IE +TYRY H++S DP YR Sbjct: 226 AVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIETMTYRYGPHTLSGDDPTRYR 285 Query: 297 TREEINEMRSNHDPIEQVRKRL 318 T+E E DPI + R L Sbjct: 286 TKELDGEWELK-DPIVRFRTFL 306 >gi|153209002|ref|ZP_01947196.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165920284|ref|ZP_02219556.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coxiella burnetii RSA 334] gi|212219125|ref|YP_002305912.1| pyruvate dehydrogenase E1 component alpha subunit [Coxiella burnetii CbuK_Q154] gi|120575539|gb|EAX32163.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165916840|gb|EDR35444.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coxiella burnetii RSA 334] gi|212013387|gb|ACJ20767.1| pyruvate dehydrogenase E1 component alpha subunit [Coxiella burnetii CbuK_Q154] Length = 368 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 12/292 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M LIR+ + KA L G +G + GQEAV +GM ++ + D YR+ Sbjct: 39 LYLYRRMALIRQLDNKAINLQRTGKMGTYPS-SRGQEAVGIGMGSAMQKEDIFCPYYRDQ 97 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G + G+ S+I+A G + +G K+ F I G Q+ G+A+ Sbjct: 98 GALFEHGIKLSEILAYWGGDE------RGSRYANPDVKDDFPNCVPIAG-QLLHAAGVAY 150 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A KYR+ + + GDG ++G YE+ N+A W L ++++I NNQ+A+ + + Sbjct: 151 AVKYRKQARAVLTICGDGGTSKGDFYEAINLAGCWQLPLVFIINNNQWAISVARGEQTHC 210 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ G QVDG D+ AV+ + KA+ R GP +IE L+YR H+ +D Sbjct: 211 QTLAQKAIAGGFEGWQVDGNDVIAVRYAVSKALEKARDGGGPTLIEALSYRLCDHTTADD 270 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDL---KEIEMNVRKII 340 A +E ++ +PI ++ L W+ E + KE+ V +++ Sbjct: 271 ATRYIPQEEWKVAWQKEPIARLGYYLESQGLWSREKEAVLQKELAQEVDQVV 322 >gi|331703292|ref|YP_004399979.1| pyruvate dehydrogenase (lipoamide) subunit alpha [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801847|emb|CBW54000.1| Pyruvate dehydrogenase (lipoamide), alphachain [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 370 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 95/310 (30%), Positives = 158/310 (50%), Gaps = 15/310 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 L AY++M L RR + + G + F GQEA V +L + D ++ YR Sbjct: 39 LEAYKIMHLSRRQDIYQNTMQRQGRLLSFLS-STGQEACEVAYINALNKKTDHFVSGYRN 97 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 + LA G IM G + G +G + + ++G+Q S TGIA Sbjct: 98 NAGWLAMGQLIRNIMLYWIGNEAGGRSPEGVNC---------LPPNIVIGSQYSQATGIA 148 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 FA KY+++ + V GDG +++G+ YE+ N A L + ++VIENN++A+ T+ S + Sbjct: 149 FAEKYKKTGGVVVTTTGDGGSSEGETYEAMNFAKLHEVPCVFVIENNKWAISTARSEQTK 208 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 NF+ +G++ IP + VDG D A + V Y R GP+++E TYR HS SD Sbjct: 209 SINFAVKGIATGIPSIIVDGNDYLACIGVFKEVVEYVRKGNGPVLVECDTYRLGAHSSSD 268 Query: 292 -PANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINNSVEFAQS 349 P YR + E EM S DP+ ++++ L+ K W+ E + K + + K++ + + + Sbjct: 269 NPDVYRPKGEFEEM-SKFDPLIRLKQYLIDKKVWSDEQEEKLVAEH-DKLVADEFAWVEQ 326 Query: 350 DKEPDPAELY 359 +K D +++ Sbjct: 327 NKNYDLIDIF 336 >gi|15615218|ref|NP_243521.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Bacillus halodurans C-125] gi|10175276|dbj|BAB06374.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Bacillus halodurans C-125] Length = 361 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 86/294 (29%), Positives = 147/294 (50%), Gaps = 16/294 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + EQ + M+ R ++++A L G +G + + GQEA ++G + +L + D Sbjct: 31 MPDLSDEQLQELMKRMVYTRIWDQRAISLNRQGRLGFYAPVA-GQEASMLGSQFALDKED 89 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ + G G G ++ M I+GAQ Sbjct: 90 WILPGYRDIPQIVFHGLPLYQAFLYSRGHFEGGQIPDGVNVLMPQI---------IIGAQ 140 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K + + + GDG A+QG YE N A +N I+V++NN++A+ Sbjct: 141 IVQAAGVAMGLKRKGKQNVAITYTGDGGASQGDFYEGMNFAGAYNSPAIFVVQNNRFAIS 200 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + SA +++ V+ I G+QVDGMD+ AV A +A A GP +IE L YR Sbjct: 201 VPVEKQSAAKTIAQKAVAAGIEGIQVDGMDVLAVYAATKQARERALAGDGPTLIETLCYR 260 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIE 333 Y H+M+ DP YR+ ++++ DP+ + RK L K W+ E + + +E Sbjct: 261 YGPHTMAGDDPTRYRS-SDLDDEWEKKDPLVRFRK-FLEGKGLWSEEQENEVVE 312 >gi|116669942|ref|YP_830875.1| pyruvate dehydrogenase (acetyl-transferring) [Arthrobacter sp. FB24] gi|116610051|gb|ABK02775.1| Pyruvate dehydrogenase (acetyl-transferring) [Arthrobacter sp. FB24] Length = 392 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 13/276 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + EQ S Y M++IRR + +A L G +G + L +GQEA +G SL + D Sbjct: 50 VRDVSDEQLGSLYEDMVVIRRIDTEATALQRQGELGLWPPL-LGQEASQIGSARSLRDDD 108 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + ++YRE+G GVD + I+ +G S G +T I+GAQ Sbjct: 109 FVFSSYRENGVAYCRGVDLADILKVW---RGNASAGWDPYTINMATP------QIIIGAQ 159 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A + +D + + FGDGA ++G V E+ AA + VI+ +NN +A+ Sbjct: 160 TLHATGYAMGIQNDGADSVAITYFGDGATSEGDVNEAMVFAASFQSPVIFFCQNNHWAIS 219 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V R + + R F IPG++VDG D+ AV A +A+ R GP IE +TYR Sbjct: 220 EPV-RLQSHIRIADRAAGFGIPGIRVDGNDVLAVMAATREALERARHGGGPTFIEAVTYR 278 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ + DP YR E+ + + DPI +VR L Sbjct: 279 MGPHTTADDPTRYRDANELEDWAAK-DPIARVRGLL 313 >gi|212212879|ref|YP_002303815.1| pyruvate dehydrogenase E1 component alpha subunit [Coxiella burnetii CbuG_Q212] gi|212011289|gb|ACJ18670.1| pyruvate dehydrogenase E1 component alpha subunit [Coxiella burnetii CbuG_Q212] Length = 368 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 12/292 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M LIR+ + KA L G +G + GQEAV +GM ++ + D YR+ Sbjct: 39 LYLYRRMALIRQLDNKAINLQRTGKMGTYPS-SRGQEAVGIGMGSAMQKEDIFCPYYRDQ 97 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G + G+ S+I+A G + +G K+ F I G Q+ G+A+ Sbjct: 98 GALFEHGIKLSEILAYWGGDE------RGSRYANPDVKDDFPNCVPIAG-QLLHAAGVAY 150 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A KYR+ + + GDG ++G YE+ N+A W L ++++I NNQ+A+ + + Sbjct: 151 AVKYRKQARAVLTICGDGGTSKGDFYEAINLAGCWQLPLVFIINNNQWAISVARGEQTHC 210 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ G QVDG D+ AV+ + KA+ R GP +IE L+YR H+ +D Sbjct: 211 QTLAQKAIAGGFEGWQVDGNDVIAVRYAVSKALEKARDGGGPTLIEALSYRLCDHTTADD 270 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDL---KEIEMNVRKII 340 A +E ++ +PI ++ L W+ E + KE+ V +++ Sbjct: 271 ATRYIPQEEWKVAWQKEPIARLGYYLESQGLWSREKEAVLQKELAQEVDQVV 322 >gi|295694989|ref|YP_003588227.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Bacillus tusciae DSM 2912] gi|295410591|gb|ADG05083.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Bacillus tusciae DSM 2912] Length = 360 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 132/262 (50%), Gaps = 13/262 (4%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++A L G +G + + GQEA ++ +L + D ++ +YR+ ++ Sbjct: 44 MVFTRVWDQRAIALNRQGRLGFYAPVA-GQEASMLASHYALNKDDFLLPSYRDIPQLVFH 102 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ + G G + S M I+ AQ + G+A K R Sbjct: 103 GLPLYQAFLYSRGHIHGGQIPEDVSALMPQI---------IIAAQCTQLAGVALGIKLRG 153 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ + FGDGA +QG YE N A ++ + I+ +NN+YA+ VS+ +A ++ Sbjct: 154 ERRVAIAYFGDGATSQGDFYEGMNFAGVFKVPAIFFSQNNRYAISVPVSKQTAAKTLVQK 213 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ I G+QVDGMD AV +A RA +GP++IE LTYRY H+M+ DP YR Sbjct: 214 SVAAGISGVQVDGMDPLAVYRVTKEAADRARAGEGPVMIESLTYRYGPHTMAGDDPTRYR 273 Query: 297 TREEINEMRSNHDPIEQVRKRL 318 T EE+ E DP+ + R L Sbjct: 274 TNEELGEW-ERQDPLIRFRAFL 294 >gi|16803092|ref|NP_464577.1| hypothetical protein lmo1052 [Listeria monocytogenes EGD-e] gi|47096141|ref|ZP_00233741.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Listeria monocytogenes str. 1/2a F6854] gi|217964855|ref|YP_002350533.1| pyruvate dehydrogenase E1 component subunit alpha [Listeria monocytogenes HCC23] gi|224502634|ref|ZP_03670941.1| pyruvate dehydrogenase E1 component subunit alpha [Listeria monocytogenes FSL R2-561] gi|254828429|ref|ZP_05233116.1| pyruvate dehydrogenase complex [Listeria monocytogenes FSL N3-165] gi|254830179|ref|ZP_05234834.1| pyruvate dehydrogenase E1 component subunit alpha [Listeria monocytogenes 10403S] gi|254898775|ref|ZP_05258699.1| pyruvate dehydrogenase E1 component subunit alpha [Listeria monocytogenes J0161] gi|254911736|ref|ZP_05261748.1| pyruvate dehydrogenase complex [Listeria monocytogenes J2818] gi|254936062|ref|ZP_05267759.1| pyruvate dehydrogenase complex [Listeria monocytogenes F6900] gi|255027445|ref|ZP_05299431.1| pyruvate dehydrogenase E1 component subunit alpha [Listeria monocytogenes FSL J2-003] gi|255028745|ref|ZP_05300696.1| pyruvate dehydrogenase E1 component subunit alpha [Listeria monocytogenes LO28] gi|284801384|ref|YP_003413249.1| hypothetical protein LM5578_1135 [Listeria monocytogenes 08-5578] gi|284994526|ref|YP_003416294.1| hypothetical protein LM5923_1089 [Listeria monocytogenes 08-5923] gi|290893797|ref|ZP_06556776.1| pyruvate dehydrogenase complex [Listeria monocytogenes FSL J2-071] gi|16410454|emb|CAC99130.1| pdhA [Listeria monocytogenes EGD-e] gi|47015490|gb|EAL06423.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Listeria monocytogenes str. 1/2a F6854] gi|217334125|gb|ACK39919.1| pyruvate dehydrogenase E1 component subunit alpha [Listeria monocytogenes HCC23] gi|258600825|gb|EEW14150.1| pyruvate dehydrogenase complex [Listeria monocytogenes FSL N3-165] gi|258608652|gb|EEW21260.1| pyruvate dehydrogenase complex [Listeria monocytogenes F6900] gi|284056946|gb|ADB67887.1| hypothetical protein LM5578_1135 [Listeria monocytogenes 08-5578] gi|284059993|gb|ADB70932.1| hypothetical protein LM5923_1089 [Listeria monocytogenes 08-5923] gi|290556624|gb|EFD90159.1| pyruvate dehydrogenase complex [Listeria monocytogenes FSL J2-071] gi|293589687|gb|EFF98021.1| pyruvate dehydrogenase complex [Listeria monocytogenes J2818] gi|307570586|emb|CAR83765.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Listeria monocytogenes L99] gi|313624256|gb|EFR94305.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Listeria innocua FSL J1-023] Length = 371 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 13/262 (4%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 56 MVWTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHYALEKHDYILPGYRDVPQLIWH 114 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ +K G G + F I+GAQ+ G+A K R+ Sbjct: 115 GLPLTKAFLFSRGHFVG---------NQFPEDLNVLSPQIIIGAQIVQAAGVALGLKKRK 165 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 D + + GDG ++QG YE N A ++ I+V++NN++A+ T + SA +++ Sbjct: 166 KDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNNKFAISTPREKQSAAETLAQK 225 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ IPG+QVDGMD AV A A A +GP +IE +TYRY H++S DP YR Sbjct: 226 AVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIETMTYRYGPHTLSGDDPTRYR 285 Query: 297 TREEINEMRSNHDPIEQVRKRL 318 T+E E DPI + R L Sbjct: 286 TKELDGEWELK-DPIVRFRTFL 306 >gi|313609505|gb|EFR85058.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Listeria monocytogenes FSL F2-208] Length = 371 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 13/262 (4%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 56 MVWTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHYALEKHDYILPGYRDVPQLIWH 114 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ +K G G + F I+GAQ+ G+A K R+ Sbjct: 115 GLPLTKAFLFSRGHFVG---------NQFPEDLNVLSPQIIIGAQIVQAAGVALGLKKRK 165 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 D + + GDG ++QG YE N A ++ I+V++NN++A+ T + SA +++ Sbjct: 166 KDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNNKFAISTPREKQSAAETLAQK 225 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ IPG+QVDGMD AV A A A +GP +IE +TYRY H++S DP YR Sbjct: 226 AVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIETMTYRYGPHTLSGDDPTRYR 285 Query: 297 TREEINEMRSNHDPIEQVRKRL 318 T+E E DPI + R L Sbjct: 286 TKELDGEWELK-DPIVRFRTFL 306 >gi|255520835|ref|ZP_05388072.1| pyruvate dehydrogenase (E1 alpha subunit) [Listeria monocytogenes FSL J1-175] Length = 337 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 13/262 (4%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 22 MVWTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHYALEKHDYILPGYRDVPQLIWH 80 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ +K G G + F I+GAQ+ G+A K R+ Sbjct: 81 GLPLTKAFLFSRGHFVG---------NQFPEDLNVLSPQIIIGAQIVQAAGVALGLKKRK 131 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 D + + GDG ++QG YE N A ++ I+V++NN++A+ T + SA +++ Sbjct: 132 KDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNNKFAISTPREKQSAAETLAQK 191 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ IPG+QVDGMD AV A A A +GP +IE +TYRY H++S DP YR Sbjct: 192 AVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIETMTYRYGPHTLSGDDPTRYR 251 Query: 297 TREEINEMRSNHDPIEQVRKRL 318 T+E E DPI + R L Sbjct: 252 TKELDGEWELK-DPIVRFRTFL 272 >gi|257082679|ref|ZP_05577040.1| pyruvate dehydrogenase [Enterococcus faecalis E1Sol] gi|256990709|gb|EEU78011.1| pyruvate dehydrogenase [Enterococcus faecalis E1Sol] Length = 371 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 13/277 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + E+ + M+ R ++++ L G +G F GQEA + + ++ + D Sbjct: 41 VPDLSDEELVELMTRMVWSRVLDQRSTALNRQGRLGFFAPTA-GQEASQLASQFAMKKED 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + G G + ++ I+GAQ Sbjct: 100 YLLPGYRDVPQLVQHGLPLREAFLWSRGHVAG---------NYYAEDLNALPPQIIIGAQ 150 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K R + + GDG ++QG YE+ N A + N +++I+NN +A+ Sbjct: 151 YIQAAGVALGLKKRGKENVVFTYTGDGGSSQGDFYEAINFAGAYQANGVFIIQNNGFAIS 210 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + +A +++ V+ IPG+QVDGMD AV A +A + A GP++IE LTYR Sbjct: 211 TPREKQTAAKTLAQKAVAAGIPGIQVDGMDPLAVYAIAKEARDWSAAGNGPVLIETLTYR 270 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 Y H++S DP YR++E +E DP+ + RK L Sbjct: 271 YGPHTLSGDDPTRYRSKEMDDEW-VQKDPLTRFRKYL 306 >gi|47092944|ref|ZP_00230725.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Listeria monocytogenes str. 4b H7858] gi|47018691|gb|EAL09443.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Listeria monocytogenes str. 4b H7858] Length = 331 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 13/262 (4%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 16 MVWTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHYALEKHDYILPGYRDVPQLIWH 74 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ +K G G + F I+GAQ+ G+A K R+ Sbjct: 75 GLPLTKAFLFSRGHFVG---------NQFPEDLNVLSPQIIIGAQIVQAAGVALGLKKRK 125 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 D + + GDG ++QG YE N A ++ I+V++NN++A+ T + SA +++ Sbjct: 126 KDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNNKFAISTPREKQSAAETLAQK 185 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ IPG+QVDGMD AV A A A +GP +IE +TYRY H++S DP YR Sbjct: 186 AVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIETMTYRYGPHTLSGDDPTRYR 245 Query: 297 TREEINEMRSNHDPIEQVRKRL 318 T+E E DPI + R L Sbjct: 246 TKELDGEWELK-DPIVRFRTFL 266 >gi|319649754|ref|ZP_08003907.1| PdhA protein [Bacillus sp. 2_A_57_CT2] gi|317398508|gb|EFV79193.1| PdhA protein [Bacillus sp. 2_A_57_CT2] Length = 371 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 88/279 (31%), Positives = 139/279 (49%), Gaps = 17/279 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + EQ R M+ R ++++ L G +G F GQEA + +L + D Sbjct: 41 MPDLSDEQLQELMRRMVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASHFALEKED 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTG--RQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 ++ YR+ I+ G+ + G G I +G +++ S + I+G Sbjct: 100 FILPGYRDVPQIIWHGLPLYQAFLWSRGHFEGGNIPEG----VNVISPQI-------IIG 148 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 AQ G+A K R K+ + GDG A+QG YE N A + I++++NN++A Sbjct: 149 AQYIQTAGVALGMKKRGEKKVAITYTGDGGASQGDFYEGINFAGAFKAPAIFIVQNNRFA 208 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T V + SA +++ V+ IPG+QVDGMD AV A + +A +GP +IE LT Sbjct: 209 ISTPVEKQSAAKTIAQKAVAAGIPGIQVDGMDPLAVYAAVREARERALNGEGPTLIETLT 268 Query: 282 YRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 YRY H+M+ DP YRT + NE DP+ + RK L Sbjct: 269 YRYGPHTMAGDDPTRYRTSDLDNEW-EKKDPLVRFRKFL 306 >gi|297193234|ref|ZP_06910632.1| 3-methyl-2-oxobutanoate dehydrogenase subunit E1-alpha [Streptomyces pristinaespiralis ATCC 25486] gi|297151701|gb|EFH31315.1| 3-methyl-2-oxobutanoate dehydrogenase subunit E1-alpha [Streptomyces pristinaespiralis ATCC 25486] Length = 385 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 84/316 (26%), Positives = 149/316 (47%), Gaps = 12/316 (3%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + E L Y ++ RR+ +A L G + + GQEA VG ++L E D + Sbjct: 55 DPELLLRLYAELVRGRRYNAQATALTKQGRLAVYPS-STGQEACEVGAALALEERDWLFP 113 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+ +A G+D + + L +G G H + + Q+ Sbjct: 114 SYRDTLAAVARGLDPVQALTLL---RGDWHTGYDPHEHRVAPLCT------PLATQLPHA 164 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+A A + + D + + GDG ++G +E+ N AA+WN V+++++NN +A+ ++ Sbjct: 165 VGLAHAARLKGDDVVALAMIGDGGTSEGDFHEALNFAAVWNAPVVFLVQNNGFAISVPLA 224 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + +A + + + V + +PG VDG D AV + +AVA R GP +IE +TYR H Sbjct: 225 KQTAAPSLAHKAVGYGMPGRLVDGNDAVAVHEVLGQAVARARRGGGPTLIEAVTYRMDAH 284 Query: 288 SMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + +D A YR E+ R+ HDPI+ + + L +G + + + E Sbjct: 285 TNADDATRYRADSEVETWRA-HDPIQLLERELTERGLLDDGTRQAAAQAAETMAADLRER 343 Query: 347 AQSDKEPDPAELYSDI 362 +D DP +L+ + Sbjct: 344 MNADPVLDPMDLFEHV 359 >gi|312900614|ref|ZP_07759911.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0470] gi|311292095|gb|EFQ70651.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0470] Length = 371 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 13/277 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + E+ + M+ R ++++ L G +G F GQEA + + ++ + D Sbjct: 41 VPDLSDEELVELMTRMVWSRVLDQRSTALNRQGRLGFFAPTA-GQEASQLASQFAMEKED 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + G G + ++ I+GAQ Sbjct: 100 YLLPGYRDVPQLVQHGLPLREAFLWSRGHVAG---------NYYAEDLNALPPQIIIGAQ 150 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K R + + GDG ++QG YE+ N A + N +++I+NN +A+ Sbjct: 151 YIQAAGVALGLKKRGKENVVFTYTGDGGSSQGDFYEAINFAGAYQANGVFIIQNNGFAIS 210 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + +A +++ V+ IPG+QVDGMD AV A +A + A GP++IE LTYR Sbjct: 211 TPREKQTAAKTLAQKAVAAGIPGIQVDGMDPLAVYAIAKEARDWSAAGNGPVLIETLTYR 270 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 Y H++S DP YR++E +E DP+ + RK L Sbjct: 271 YGPHTLSGDDPTRYRSKEMDDEW-VQKDPLTRFRKYL 306 >gi|313638459|gb|EFS03641.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Listeria seeligeri FSL S4-171] Length = 371 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 13/262 (4%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 56 MVWTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHYALEKHDYILPGYRDVPQLIWH 114 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ +K G G + F I+GAQ+ G+A K R+ Sbjct: 115 GLPLTKAFLFSRGHFVG---------NQFPEDLNVLSPQIIIGAQIVQAAGVALGLKKRK 165 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 D + + GDG ++QG YE N A ++ I+V++NN++A+ T + SA +++ Sbjct: 166 KDAVVITYTGDGGSSQGDFYEGMNFAGAFHAPAIFVVQNNKFAISTPREKQSAAETLAQK 225 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ IPG+QVDGMD AV A A A +GP +IE +TYRY H++S DP YR Sbjct: 226 AVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIETMTYRYGPHTLSGDDPTRYR 285 Query: 297 TREEINEMRSNHDPIEQVRKRL 318 T+E E DPI + R L Sbjct: 286 TKELDGEWELK-DPIVRFRTFL 306 >gi|29375920|ref|NP_815074.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Enterococcus faecalis V583] gi|227518616|ref|ZP_03948665.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Enterococcus faecalis TX0104] gi|229545968|ref|ZP_04434693.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Enterococcus faecalis TX1322] gi|229550157|ref|ZP_04438882.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Enterococcus faecalis ATCC 29200] gi|255972934|ref|ZP_05423520.1| pyruvate dehydrogenase [Enterococcus faecalis T1] gi|255975988|ref|ZP_05426574.1| pyruvate dehydrogenase [Enterococcus faecalis T2] gi|256762360|ref|ZP_05502940.1| pyruvate dehydrogenase [Enterococcus faecalis T3] gi|256852990|ref|ZP_05558360.1| pyruvate dehydrogenase complex E1 component [Enterococcus faecalis T8] gi|256958843|ref|ZP_05563014.1| pyruvate dehydrogenase [Enterococcus faecalis DS5] gi|256962064|ref|ZP_05566235.1| pyruvate dehydrogenase [Enterococcus faecalis Merz96] gi|256965261|ref|ZP_05569432.1| pyruvate dehydrogenase [Enterococcus faecalis HIP11704] gi|257078875|ref|ZP_05573236.1| pyruvate dehydrogenase [Enterococcus faecalis JH1] gi|257085388|ref|ZP_05579749.1| pyruvate dehydrogenase [Enterococcus faecalis Fly1] gi|257086882|ref|ZP_05581243.1| pyruvate dehydrogenase [Enterococcus faecalis D6] gi|257089746|ref|ZP_05584107.1| pyruvate dehydrogenase [Enterococcus faecalis CH188] gi|257415963|ref|ZP_05592957.1| pyruvate dehydrogenase [Enterococcus faecalis AR01/DG] gi|257419165|ref|ZP_05596159.1| pyruvate dehydrogenase [Enterococcus faecalis T11] gi|257422757|ref|ZP_05599747.1| pyruvate dehydrogenase complex E1 component [Enterococcus faecalis X98] gi|293383085|ref|ZP_06629003.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis R712] gi|293387762|ref|ZP_06632306.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis S613] gi|294780931|ref|ZP_06746284.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis PC1.1] gi|300861350|ref|ZP_07107437.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TUSoD Ef11] gi|307271159|ref|ZP_07552442.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX4248] gi|307273365|ref|ZP_07554610.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0855] gi|307277510|ref|ZP_07558602.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX2134] gi|307279160|ref|ZP_07560218.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0860] gi|307288152|ref|ZP_07568162.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0109] gi|307291337|ref|ZP_07571221.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0411] gi|312904095|ref|ZP_07763263.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0635] gi|312907325|ref|ZP_07766316.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis DAPTO 512] gi|312909942|ref|ZP_07768790.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Enterococcus faecalis DAPTO 516] gi|312952356|ref|ZP_07771231.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0102] gi|29343382|gb|AAO81144.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Enterococcus faecalis V583] gi|227073944|gb|EEI11907.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Enterococcus faecalis TX0104] gi|229304743|gb|EEN70739.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Enterococcus faecalis ATCC 29200] gi|229308931|gb|EEN74918.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Enterococcus faecalis TX1322] gi|255963952|gb|EET96428.1| pyruvate dehydrogenase [Enterococcus faecalis T1] gi|255968860|gb|EET99482.1| pyruvate dehydrogenase [Enterococcus faecalis T2] gi|256683611|gb|EEU23306.1| pyruvate dehydrogenase [Enterococcus faecalis T3] gi|256711449|gb|EEU26487.1| pyruvate dehydrogenase complex E1 component [Enterococcus faecalis T8] gi|256949339|gb|EEU65971.1| pyruvate dehydrogenase [Enterococcus faecalis DS5] gi|256952560|gb|EEU69192.1| pyruvate dehydrogenase [Enterococcus faecalis Merz96] gi|256955757|gb|EEU72389.1| pyruvate dehydrogenase [Enterococcus faecalis HIP11704] gi|256986905|gb|EEU74207.1| pyruvate dehydrogenase [Enterococcus faecalis JH1] gi|256993418|gb|EEU80720.1| pyruvate dehydrogenase [Enterococcus faecalis Fly1] gi|256994912|gb|EEU82214.1| pyruvate dehydrogenase [Enterococcus faecalis D6] gi|256998558|gb|EEU85078.1| pyruvate dehydrogenase [Enterococcus faecalis CH188] gi|257157791|gb|EEU87751.1| pyruvate dehydrogenase [Enterococcus faecalis ARO1/DG] gi|257160993|gb|EEU90953.1| pyruvate dehydrogenase [Enterococcus faecalis T11] gi|257164581|gb|EEU94541.1| pyruvate dehydrogenase complex E1 component [Enterococcus faecalis X98] gi|291079750|gb|EFE17114.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis R712] gi|291082832|gb|EFE19795.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis S613] gi|294451985|gb|EFG20434.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis PC1.1] gi|300850389|gb|EFK78139.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TUSoD Ef11] gi|306497568|gb|EFM67101.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0411] gi|306500888|gb|EFM70206.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0109] gi|306504285|gb|EFM73497.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0860] gi|306505775|gb|EFM74953.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX2134] gi|306509892|gb|EFM78917.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0855] gi|306512657|gb|EFM81306.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX4248] gi|310626353|gb|EFQ09636.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis DAPTO 512] gi|310629740|gb|EFQ13023.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0102] gi|310632571|gb|EFQ15854.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0635] gi|311289900|gb|EFQ68456.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Enterococcus faecalis DAPTO 516] gi|315027406|gb|EFT39338.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX2137] gi|315030027|gb|EFT41959.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX4000] gi|315033754|gb|EFT45686.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0017] gi|315036840|gb|EFT48772.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0027] gi|315145661|gb|EFT89677.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX2141] gi|315147849|gb|EFT91865.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX4244] gi|315150673|gb|EFT94689.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0012] gi|315153319|gb|EFT97335.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0031] gi|315155903|gb|EFT99919.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0043] gi|315157929|gb|EFU01946.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0312] gi|315160253|gb|EFU04270.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0645] gi|315164232|gb|EFU08249.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX1302] gi|315166674|gb|EFU10691.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX1341] gi|315170042|gb|EFU14059.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX1342] gi|315174432|gb|EFU18449.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX1346] gi|315575592|gb|EFU87783.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0309B] gi|315578441|gb|EFU90632.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0630] gi|315579966|gb|EFU92157.1| pyruvate dehydrogenase E1 component, alpha subunit [Enterococcus faecalis TX0309A] gi|323480587|gb|ADX80026.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Enterococcus faecalis 62] gi|327534994|gb|AEA93828.1| pyruvate dehydrogenase complex E1 component alpha subunit [Enterococcus faecalis OG1RF] Length = 371 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 13/277 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + E+ + M+ R ++++ L G +G F GQEA + + ++ + D Sbjct: 41 VPDLSDEELVELMTRMVWSRVLDQRSTALNRQGRLGFFAPTA-GQEASQLASQFAMEKED 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + G G + ++ I+GAQ Sbjct: 100 YLLPGYRDVPQLVQHGLPLREAFLWSRGHVAG---------NYYAEDLNALPPQIIIGAQ 150 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K R + + GDG ++QG YE+ N A + N +++I+NN +A+ Sbjct: 151 YIQAAGVALGLKKRGKENVVFTYTGDGGSSQGDFYEAINFAGAYQANGVFIIQNNGFAIS 210 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + +A +++ V+ IPG+QVDGMD AV A +A + A GP++IE LTYR Sbjct: 211 TPREKQTAAKTLAQKAVAAGIPGIQVDGMDPLAVYAIAKEARDWSAAGNGPVLIETLTYR 270 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 Y H++S DP YR++E +E DP+ + RK L Sbjct: 271 YGPHTLSGDDPTRYRSKEMDDEW-VQKDPLTRFRKYL 306 >gi|154685875|ref|YP_001421036.1| PdhA [Bacillus amyloliquefaciens FZB42] gi|92012070|emb|CAJ57405.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus amyloliquefaciens FZB42] gi|154351726|gb|ABS73805.1| PdhA [Bacillus amyloliquefaciens FZB42] Length = 371 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 97/311 (31%), Positives = 152/311 (48%), Gaps = 17/311 (5%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ IR ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 54 RRMVYIRILDQRSISLSRQGRLG-FYAPTAGQEASQIASHFALEQDDFILPGYRDVPQLI 112 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G+ + S+G M N I+GAQ+ G+A K Sbjct: 113 WHGLPLHQAFL--------FSRGHFKGNQMPEGVNAL-SPQIIIGAQIIQTAGVALGLKK 163 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R + + GDG A+QG YE N A + I+V++NN+YA+ T V + S+ + Sbjct: 164 RGKKAVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAISTPVEKQSSAQTIA 223 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPAN 294 ++ V+ I G+QVDGMD AV A +A +GP +IE LT+RY H+MS DP Sbjct: 224 QKAVAVGITGVQVDGMDALAVYAATAEARQRAINGEGPTLIETLTFRYGPHTMSGDDPTK 283 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YRT+E NE DP+ + RK L NK W+ E + K IE ++ I +++ A + + Sbjct: 284 YRTKEIENEWEQK-DPLVRFRK-FLENKGLWSEEEENKVIE-QAKEEIKQAIKKADGESK 340 Query: 353 PDPAELYSDIL 363 P EL ++ Sbjct: 341 PKVTELIENMF 351 >gi|329768242|ref|ZP_08259743.1| pyruvate dehydrogenase E1 component [Gemella haemolysans M341] gi|328837441|gb|EGF87070.1| pyruvate dehydrogenase E1 component [Gemella haemolysans M341] Length = 368 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 86/310 (27%), Positives = 154/310 (49%), Gaps = 14/310 (4%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + + E+ + ++++ R ++E+ L G +G + GQEA + +L + D Sbjct: 41 PDISDEKLVELMKVLVFGRTYDERVIILNRQGALGNYPPAG-GQEASQLATTFALEKNDF 99 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 ++ YR+ +L G LT Q + + + + IVG Q+ Sbjct: 100 LVPTYRDIPPLLIRG---------LTIEQAFLWYKGHLKANQYPESLCAFSPQVIVGGQM 150 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G+AF + + + + + GDG ++QG YE N A ++N +I +++NN Y + T Sbjct: 151 PHAAGVAFGKRLKGENNVVLAFCGDGGSSQGDFYEGLNFAGVYNAPLITILQNNGYGIST 210 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +S+ + +++GV+ I ++VDGMD A+ A + KA Y H GP++IE TYR Sbjct: 211 PISKQTKAITLAQKGVAAGIASIKVDGMDPLAMYAAVTKAREYAIEH-GPVLIEAFTYRL 269 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINN 342 H+MS DP YRT EE++ + DP+ ++RK L W SE + + I+ R+I Sbjct: 270 GPHTMSDDPTRYRTDEEVSSWQKK-DPLIRLRKYLEKKGLWNSEIEEETIDDVKRQIKEA 328 Query: 343 SVEFAQSDKE 352 V +++K+ Sbjct: 329 MVAINKAEKQ 338 >gi|289434313|ref|YP_003464185.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|315302545|ref|ZP_07873378.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Listeria ivanovii FSL F6-596] gi|289170557|emb|CBH27097.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313629084|gb|EFR97384.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Listeria ivanovii FSL F6-596] gi|313633885|gb|EFS00602.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Listeria seeligeri FSL N1-067] Length = 371 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 13/262 (4%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 56 MVWTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHYALEKHDYILPGYRDVPQLIWH 114 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ +K G G + F I+GAQ+ G+A K R+ Sbjct: 115 GLPLTKAFLFSRGHFVG---------NQFPEDLNVLSPQIIIGAQIVQAAGVALGLKKRK 165 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 D + + GDG ++QG YE N A ++ I+V++NN++A+ T + SA +++ Sbjct: 166 KDAVVITYTGDGGSSQGDFYEGMNFAGAFHAPAIFVVQNNKFAISTPREKQSAAETLAQK 225 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ IPG+QVDGMD AV A A A +GP +IE +TYRY H++S DP YR Sbjct: 226 AVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIETMTYRYGPHTLSGDDPTRYR 285 Query: 297 TREEINEMRSNHDPIEQVRKRL 318 T+E E DPI + R L Sbjct: 286 TKELDGEWELK-DPIVRFRTFL 306 >gi|332535736|ref|ZP_08411484.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Pseudoalteromonas haloplanktis ANT/505] gi|332034867|gb|EGI71398.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Pseudoalteromonas haloplanktis ANT/505] Length = 404 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 90/329 (27%), Positives = 152/329 (46%), Gaps = 15/329 (4%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +K + Y M IR +E+ G V F C+G+EA + +L + D + Sbjct: 45 DISKHTAIKLYETMRFIRLLDERMQGAQRQGRVS-FYMQCLGEEAAVTASAAALDQDDMI 103 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + YRE + G + M ++ + + KG+ +H S + +G Q+ Sbjct: 104 MAQYREQAALHYRGFTLDQFMNQMFSNELDLGKGRQMPIHYGSKALNYMTISSPLGTQIP 163 Query: 166 LGTGIAFANKYRRSD-----------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 TG A+ K + D + + FG+GAA++G + N+AA+ VI+ Sbjct: 164 QATGYAYGQKIKHIDAKTGELASTIDNVTICYFGEGAASEGDFHAGLNMAAVHKAPVIFF 223 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 NN YA+ T + RGV + I ++VDG D AV A KA P Sbjct: 224 ARNNGYAISTPADEQFKGDGIASRGVGYGIKTIRVDGTDALAVYAATKKAREIASTQGEP 283 Query: 275 IIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 ++IE + YR HS S DP+ YR+++E E + PI++ RK L+ W +E D + + Sbjct: 284 VLIESIAYRLGAHSTSDDPSGYRSKDE--EANNQICPIDKFRKWLVKQDWLNEEDDIKAK 341 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++R+ I +++ A+ +P EL SD+ Sbjct: 342 ESIREEILAALKRAEVVAKPALEELVSDV 370 >gi|227553145|ref|ZP_03983194.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Enterococcus faecalis HH22] gi|227177730|gb|EEI58702.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Enterococcus faecalis HH22] Length = 371 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 13/277 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + E+ + M+ R ++++ L G +G F GQEA + + ++ + D Sbjct: 41 VPDLSDEELVELMTRMVWSRVLDQRSTALNRQGRLGFFAPTA-GQEASQLASQFAMEKED 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + G G + ++ I+GAQ Sbjct: 100 YLLPGYRDVPQLVQHGLPLREAFLWSRGHVAG---------NYYAEDLNALPPQIIIGAQ 150 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K R + + GDG ++QG YE+ N A + N +++I+NN +A+ Sbjct: 151 YIQAAGVALGLKKRGKENVVFTYTGDGGSSQGDFYEAINFAGAYQANGVFIIQNNGFAIS 210 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + +A +++ V+ IPG+QVDGMD AV A +A + A GP++IE LTYR Sbjct: 211 TPREKQTAAKTLAQKAVAAGIPGVQVDGMDPLAVYAIAKEARDWSAAGNGPVLIETLTYR 270 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 Y H++S DP YR++E +E DP+ + RK L Sbjct: 271 YGPHTLSGDDPTRYRSKEMDDEW-VQKDPLTRFRKYL 306 >gi|73663005|ref|YP_301786.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495520|dbj|BAE18841.1| pyruvate dehydrogenase E1 component alpha subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 370 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 87/293 (29%), Positives = 140/293 (47%), Gaps = 14/293 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + EQ + M+ R ++++ L G +G F GQEA + + +L + D Sbjct: 40 LPDLSDEQLVELMERMVWTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQYALEQED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ ++ S+G M N I+GAQ Sbjct: 99 FILPGYRDVPQLIWQGLPLTEAFL--------FSRGHFKGNRMPEGVNAL-SPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K R + + GDG ++QG YE N A+ + I+VI+NN YA+ Sbjct: 150 YVQTAGVALGIKKRGKQAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S+ +A T +++ ++ IPG+QVDGMD AV +A GP +IE +TYR Sbjct: 210 TPRSKQTAATTLAQKAIACGIPGLQVDGMDALAVYQATKEARDRAVNGDGPTLIETITYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDLKEIE 333 Y H+M+ DP YRT +E +E DP+ + RK L W E + + IE Sbjct: 270 YGPHTMAGDDPTKYRTSDEDSEW-EKKDPLVRYRKFLEAKGLWTEEKENEVIE 321 >gi|154706960|ref|YP_001424057.1| pyruvate dehydrogenase E1 component alpha subunit [Coxiella burnetii Dugway 5J108-111] gi|154356246|gb|ABS77708.1| pyruvate dehydrogenase E1 component alpha subunit [Coxiella burnetii Dugway 5J108-111] Length = 368 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 12/292 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M LIR+ + KA L G +G + GQEAV +GM ++ + D YR+ Sbjct: 39 LYLYRRMALIRQLDNKAINLQRTGKMGTYPS-SRGQEAVGIGMGSAMQKEDIFCPYYRDQ 97 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G + G+ S+I+A G + +G K+ F I G Q+ G+A+ Sbjct: 98 GALFEHGIKLSEILAYWGGDE------RGSRYANPDVKDDFPNCVPIAG-QLLHAAGVAY 150 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A KYR+ + + GDG ++G YE+ N+A W L ++++I NNQ+A+ + + Sbjct: 151 AVKYRKQARAVLTICGDGGTSKGDFYEAINLAGCWQLPLVFIINNNQWAISVARGEQTHC 210 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ G QVDG D+ AV+ + KA+ R GP +IE L+YR H+ +D Sbjct: 211 QTLAQKAIAGGFGGWQVDGNDVIAVRYAVSKALEKARDGGGPTLIEALSYRLCDHTTADD 270 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDL---KEIEMNVRKII 340 A +E ++ +PI ++ L W+ E + KE+ V +++ Sbjct: 271 ATRYIPQEEWKVAWQKEPIARLGYYLESQGLWSREKEAVLQKELAQEVDQVV 322 >gi|332993066|gb|AEF03121.1| alpha keto acid dehydrogenase complex, E1 component subunit alpha [Alteromonas sp. SN2] Length = 395 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 13/304 (4%) Query: 34 VDIPFL----------EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCH 83 +DIP L E ++ E ++ L + M IR +E+ G + F Sbjct: 24 IDIPMLQLLKSDGSEHENAQLPELDQTLALKIHDTMEYIRILDERMVAAQRQGRIS-FYL 82 Query: 84 LCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGS 143 G+EA V +L+ D +++ YRE G + G + M ++ + +KG+ Sbjct: 83 ASTGEEAAAVASAAALSPHDMIMSQYREQGALAFRGYTTDQFMNQMFSNKADPNKGRQMP 142 Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 +H F +G Q+ +G A+ K ++ + + FG+GAA++G + N+ Sbjct: 143 IHYGDKALNFMTISSPLGTQIPQASGYAYGQKMAGNEAVTICYFGEGAASEGDFHAGVNM 202 Query: 204 AALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 AA+ N VI+ NN YA+ T A + RG+ + + ++VDG D AV A + Sbjct: 203 AAVLNCPVIFFCRNNGYAISTPSEEQFAGDGIASRGIGYGVKTIRVDGNDPLAVFAATQE 262 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 A A P++IE +TYR HS S DP YR+R+E ++ R+ DPI ++ L H Sbjct: 263 ARRIALAEMCPVLIEAMTYRLAAHSTSDDPTGYRSRDEEDKWRAK-DPIARMANWLTHKG 321 Query: 323 WASE 326 W E Sbjct: 322 WFDE 325 >gi|324509103|gb|ADY43835.1| 2-oxoisovalerate dehydrogenase subunit alpha [Ascaris suum] Length = 441 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 94/345 (27%), Positives = 154/345 (44%), Gaps = 8/345 (2%) Query: 19 PSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMV 78 P++ R S+ VD + F+KE + YR M ++ + ++ G + Sbjct: 66 PTIPIYRVTDSTGKFVDPS-----QDPNFDKEFAIDVYRKMSVLEQMDKILYDAQRQGRI 120 Query: 79 GGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK 138 F G+EA +G +L + D + YRE G +L G + + G I K Sbjct: 121 S-FYMTNFGEEASHIGSAAALQDDDLIYAQYREAGVLLWRGFSLHDFINQCYGNAKDIGK 179 Query: 139 GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 GK +H S ++ F + Q+ G A+A K + +I VV FG+GAA++G + Sbjct: 180 GKQMPVHYGSLEHHFVAISSPLATQIPQAVGSAYAFKRVENGRIVVVYFGEGAASEGDAH 239 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 + N A+ VI+ NN YA+ T + + RG + I ++VDG D AV Sbjct: 240 AALNFASTLRCPVIFFCRNNGYAISTPTNEQYGGDGIAGRGPGYGIKTIRVDGNDFFAV- 298 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKR 317 K P++IE +TYR HS SD + YR+ +E+ PI + R Sbjct: 299 YNATKLAREVALQNEPVLIEAMTYRIGHHSTSDDSTAYRSADEVKIWNKKEHPIARFRTY 358 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 L+ W EG+ E + N+RK + + A+ + P E++ D+ Sbjct: 359 LIDKGWWKEGEEIEWQKNMRKEVLTAFSEAEKVQMLGPHEMFEDV 403 >gi|284166060|ref|YP_003404339.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Haloterrigena turkmenica DSM 5511] gi|284015715|gb|ADB61666.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Haloterrigena turkmenica DSM 5511] Length = 702 Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 81/244 (33%), Positives = 124/244 (50%), Gaps = 14/244 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M L RR +E+ L G +G F GQEA VG +LT+ D + A+RE Sbjct: 40 YRTMKLSRRLDERTIALQRRGELGTFAP-ATGQEAAQVGSTAALTDDDWTVPAFREQPSA 98 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA G+ I G + +G G + VG+Q GI +A Sbjct: 99 LARGLSPQAIFEYAMG----LEEGGGPPDDVPIMPPAI-----AVGSQPLHAAGIGWAQA 149 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + SD+I + FGDGA ++G+VYE+ N+A ++ ++V +NNQYA+ T + + + Sbjct: 150 LQDSDRIALTYFGDGATSEGEVYEAMNLAGVYEAQTVFVCQNNQYAISTPLEKQTRAATL 209 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMS-DPA 293 +++ ++ I +QVDG D+ V A + A RA +G P +IE TYR H+ + DP+ Sbjct: 210 AQKAIAAGIEPIQVDGNDVLGVYAVTKE--ARERALRGVPTLIEATTYRREMHTTADDPS 267 Query: 294 NYRT 297 YRT Sbjct: 268 VYRT 271 >gi|331696888|ref|YP_004333127.1| pyruvate dehydrogenase [Pseudonocardia dioxanivorans CB1190] gi|326951577|gb|AEA25274.1| Pyruvate dehydrogenase (acetyl-transferring) [Pseudonocardia dioxanivorans CB1190] Length = 358 Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 81/308 (26%), Positives = 151/308 (49%), Gaps = 12/308 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR ++ RR E+AG L G + + GQEA V L + D + YR+ I Sbjct: 38 YRRLVSARRLNEQAGALVRQGRLAVYPS-SRGQEACQVACASVLADDDWLFPTYRDTAAI 96 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 A GVD ++++ L +G G ++H + + + Q+ G+ A + Sbjct: 97 AARGVDPVEVLSML---RGDWHCGYDPTVHKVAPQAT------PLATQLLHAVGVGHAAR 147 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + D + + GDGA ++G +E+ N AA++ V++ ++NN+YA+ ++R S + Sbjct: 148 LKGEDTVVMALCGDGATSEGDFHEALNFAAVFAAPVVFFVQNNKYAISVPLARQSVAPSL 207 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 + + + + +PG++VDG D+ ++ + +AV RA +GP ++E TYR H+ +D A Sbjct: 208 AAKAIGYGMPGVRVDGNDLVVLEQVLAEAVGRARAGQGPTLVEADTYRMESHTNADDATR 267 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT +E+ E DP+ +V+ L E + I ++ + ++ D Sbjct: 268 YRTDDEVAEW-VGRDPVVRVKTYLTAVGALDEAREQRITAAAEEMAASVRAGLGTEAPVD 326 Query: 355 PAELYSDI 362 P EL++ + Sbjct: 327 PEELFAHV 334 >gi|304404466|ref|ZP_07386127.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Paenibacillus curdlanolyticus YK9] gi|304346273|gb|EFM12106.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Paenibacillus curdlanolyticus YK9] Length = 360 Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 86/294 (29%), Positives = 150/294 (51%), Gaps = 13/294 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+ R ++E+A L G +G + + GQEA +V + +L + D + YR+ + Sbjct: 49 YR-MVFTRTWDERAVNLGRQGRLGFYAPVS-GQEASMVCSEYALNKEDFICPGYRDMPQL 106 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G+ + G Q G + ++ M I+GAQV G+A A K Sbjct: 107 VWHGLPLYQAFLYSRGHQHGGQIPQDVNVLMPQI---------IIGAQVLHAMGVAMAFK 157 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + + + GDG +++G YE+ N A + L I+V++NN YA+ T ++ +A + Sbjct: 158 KKGQKNVAITYTGDGGSSEGDFYEALNFAGAFKLPAIFVVQNNGYAITTPYAKQTAALSV 217 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + + V+ I G+QVDGMD AV + +A R +G +IE++TYRYR HS++ D Sbjct: 218 AHKAVAAGIKGVQVDGMDPLAVYKAVSEAAERGRNGEGATLIELITYRYRPHSLADDTTK 277 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 YRT++E N+ + DP+ + K L +E D ++ + +N ++ A+ Sbjct: 278 YRTKDEENDW-APRDPLVRFGKYLEAKGLWTEEDTNRVKEEAKATVNEHIKKAE 330 >gi|328773243|gb|EGF83280.1| hypothetical protein BATDEDRAFT_9167 [Batrachochytrium dendrobatidis JAM81] Length = 400 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 84/278 (30%), Positives = 139/278 (50%), Gaps = 3/278 (1%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EA +G +LT D + YRE G +L G + M + + KG+ +H Sbjct: 88 GEEATHMGSAAALTNDDVVYGQYREAGVLLYRGFTLDEFMNQCYANELDYGKGRQMPVHY 147 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAA 205 + K F +G Q+ G A+A K K C +C FG+GAA++G + + N+AA Sbjct: 148 GTPKYNFQTISSPLGTQLPHAAGSAYALKLA-GKKACAICYFGEGAASEGDFHAALNMAA 206 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 VIY+ NN YA+ T + RG + + ++VDG DI AV + +A Sbjct: 207 TTESPVIYLCRNNGYAISTPAKEQYRGDGIASRGHGYGMATIRVDGNDILAVYNAVKEAR 266 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 + P++IE +TYR HS SD ++ YR+++E+ E + NH P+ + RK L Sbjct: 267 RMAIEEERPVLIEAMTYRVGHHSTSDDSSAYRSKQEVAEWQQNHSPMVRFRKYLEARSLW 326 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 SE + + + ++R I S A+ ++P +L++D+ Sbjct: 327 SEEEEQAFKKDIRTKILKSFAAAEKVRKPPIEDLFTDV 364 >gi|118431551|ref|NP_148091.2| pyruvate dehydrogenase E1 component, alpha subunit [Aeropyrum pernix K1] gi|116062876|dbj|BAA80678.2| pyruvate dehydrogenase E1 component, alpha subunit [Aeropyrum pernix K1] Length = 377 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 97/338 (28%), Positives = 157/338 (46%), Gaps = 19/338 (5%) Query: 12 DIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQ 71 + K L ++ KRA VD L E + Y M+ R + + Sbjct: 3 EYKTLLEDALGFKRAVDEEGRVVDEELLPKVSEGEI-----VEIYTYMVRARVIDSWLLK 57 Query: 72 LYGMGMVGGFCHLC-IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELT 130 L MG V H GQEAV VG L D + +YRE G L G+ +I+ Sbjct: 58 LQRMGKVA--LHAPNKGQEAVAVGAAKPLRRDDWVFPSYRELGAYLVRGMSEEEILDRAL 115 Query: 131 GRQGGISKGKGGSMHMF-STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGD 189 KG +F + K VG Q+ + G A+A KY D + + FGD Sbjct: 116 ANAD--DPLKGSDFAIFGNRKYNLVPAPVPVGNQIPISVGAAYAMKYLGRDTVTLTFFGD 173 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 GA ++G + N A ++ + + VI+NNQ+A+ +R +A + + +G+++ +PG+++ Sbjct: 174 GATSRGDFHAGLNFAGVFKVPAVLVIQNNQWAISVPRARQTAAPSLAVKGLAYGVPGVRI 233 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNH 308 DG D+ V + A R GP +IE +TYR H+ + DP+ YRT EE + + Sbjct: 234 DGNDVMVVYKIVSDAAEKARRGGGPTLIEAVTYRLGPHTTADDPSRYRTSEE-ERIMERY 292 Query: 309 DPIEQVRKRLLHNKWASEGDLKEIE-MNVRKIINNSVE 345 +P+ ++RK + S G L E E +++ + N+ VE Sbjct: 293 EPLRRMRKFM-----ESMGILTEKEALSIEEEWNSKVE 325 >gi|238059377|ref|ZP_04604086.1| pyruvate dehydrogenase [Micromonospora sp. ATCC 39149] gi|237881188|gb|EEP70016.1| pyruvate dehydrogenase [Micromonospora sp. ATCC 39149] Length = 397 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 135/265 (50%), Gaps = 14/265 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M++ RRF+ +A L G + + GQEA VG +++ D + YRE + Sbjct: 74 YRRMVVGRRFDAQATALTKQGRLAVYPS-SRGQEACQVGAVLAVGHNDWVFPTYRESMAL 132 Query: 116 LACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 ++ G+D +++ L G G + + + + Q G+A+ Sbjct: 133 VSRGIDPVEVLTLLRGDWHCGYDPARVRTAPQCTP----------LATQCVHAAGLAYGE 182 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 ++ D + + GDGA ++G +E N AA++ V++ ++NN+YA+ +SR +A + Sbjct: 183 AHQGRDTVALAFIGDGATSEGDFHEGVNFAAVFKAPVVFFVQNNKYAISVPLSRQTAAPS 242 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + +GV + +P QVDG D AV A + +AVA+ RA GP ++E TYR H+ +D A Sbjct: 243 LAYKGVGYGVPSEQVDGNDPVAVLAVLTRAVAHARAGNGPYLVEAHTYRMEPHTNADDAT 302 Query: 295 -YRTREEINEMRSNHDPIEQVRKRL 318 YR E++ R + DPI ++ L Sbjct: 303 RYRDGAEVDTWR-DRDPIARLETYL 326 >gi|56460781|ref|YP_156062.1| Alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Idiomarina loihiensis L2TR] gi|56179791|gb|AAV82513.1| Alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Idiomarina loihiensis L2TR] Length = 395 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 94/345 (27%), Positives = 166/345 (48%), Gaps = 18/345 (5%) Query: 32 DCVDIPFLEGF----------EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF 81 D V IP L+ ++ E++KE + + M IR +E+ G + F Sbjct: 21 DSVTIPMLQILKEDGSFHKDADMPEYDKELIVKIHDTMQFIRILDERMIAAQRQGRIS-F 79 Query: 82 CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKG 141 G+EA V +L GD ++ YRE G + G + M +L + + KG+ Sbjct: 80 YLASRGEEAESVASAAALDAGDMIMGQYREQGALAYRGFTVEQFMNQLFSNEKDLGKGRQ 139 Query: 142 GSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF 201 +H F +G Q+ TG AF K +++K + FG+GAA++G + + Sbjct: 140 MPVHYGCADLNFMTISSPLGTQIPQATGYAFGQKMDKTEKCTICYFGEGAASEGDFHAAL 199 Query: 202 NIAALWNLNVIYVIENNQYAMGTSVS-RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+A+++ + VI+ NN YA+ T A + RG+ + + +++DG D+ AV Sbjct: 200 NMASVYKVPVIFFCRNNGYAISTPAQGEQYAGDGIAPRGIGYGMKTIRIDGNDVFAVLKA 259 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 +A P++IE ++YR GHS S DP YRTR+E ++ DP+E+++K + Sbjct: 260 TQEARRLAVEENEPVLIEAMSYRMSGHSTSDDPTGYRTRDEEAGWQAK-DPLERLQKWMT 318 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AELYSDI 362 W + ++E V+ + +++ +S+K P P EL +D+ Sbjct: 319 DEGWLDKDHVEEHHAEVKAKVLAALK--ESEKVPVPHIDELINDV 361 >gi|313117058|ref|YP_004038182.1| pyruvate dehydrogenase E1 component, alpha subunit [Halogeometricum borinquense DSM 11551] gi|312295010|gb|ADQ69046.1| pyruvate dehydrogenase E1 component, alpha subunit [Halogeometricum borinquense DSM 11551] Length = 382 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 81/306 (26%), Positives = 151/306 (49%), Gaps = 19/306 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + E+ +S Y + L RRF+++A G + + + GQE V +L + D Sbjct: 38 VPDLSDEELISMYEDIKLARRFDQRAISFQRQGRLATYAPMT-GQEGAQVATSYALDDQD 96 Query: 104 QMITAYREHGHILACGVDASKIMAELTG-RQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 + YREH GVD + ++ L G R+G M + + Sbjct: 97 WLFPTYREHAAKHVHGVDLASLLKPLRGLREGYAVPDDVNVMPEYIP----------IAT 146 Query: 163 QVSLGTGIAFANKYR-RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 QV G+A+ +K + ++D+ + GDGA ++G +E N A ++++ ++V NNQ+A Sbjct: 147 QVPQAMGMAWGHKMQGKTDQAVLCHLGDGATSEGDFHEGLNFAGVFDVPTVFVCNNNQWA 206 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG----PIII 277 + R +A +++ ++ I G++VDG+D AV +A+ ++ G P +I Sbjct: 207 ISVPRERQTASETIAQKAQAYGIDGVRVDGLDPLAVYQVTKEALNKAKSPTGDELRPTLI 266 Query: 278 EMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E + YRY H+ + DP+ YR +E +E + DP+++++K L + EG EI+ + Sbjct: 267 EAVQYRYGAHTTADDPSVYREADEADEWKEK-DPVDRLQKYLYNEGLLDEGIEAEIDDRI 325 Query: 337 RKIINN 342 I++ Sbjct: 326 EAKISD 331 >gi|15218984|ref|NP_173562.1| 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative [Arabidopsis thaliana] gi|9454571|gb|AAF87894.1|AC015447_4 branched-chain alpha keto-acid dehydrogenase E1 - alpha subunit [Arabidopsis thaliana] gi|20466298|gb|AAM20466.1| branched-chain alpha keto-acid dehydrogenase, putative [Arabidopsis thaliana] gi|23198122|gb|AAN15588.1| branched-chain alpha keto-acid dehydrogenase, putative [Arabidopsis thaliana] gi|332191978|gb|AEE30099.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Arabidopsis thaliana] Length = 472 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 73/284 (25%), Positives = 138/284 (48%), Gaps = 1/284 (0%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 F +G+EA+ + +L+ D ++ YRE G +L G + + G + KG Sbjct: 157 SFYLTSVGEEAINIASAAALSPDDVVLPQYREPGVLLWRGFTLEEFANQCFGNKADYGKG 216 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + +H S + ++ + Q+ G+ ++ K + + V GDG ++G + Sbjct: 217 RQMPIHYGSNRLNYFTISSPIATQLPQAAGVGYSLKMDKKNACTVTFIGDGGTSEGDFHA 276 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 N AA+ V+++ NN +A+ T +S +G ++ I ++VDG D AV + Sbjct: 277 GLNFAAVMEAPVVFICRNNGWAISTHISEQFRSDGIVVKGQAYGIRSIRVDGNDALAVYS 336 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 + A + P++IEM+TYR HS SD + YR +EI + + +P+ + RK + Sbjct: 337 AVRSAREMAVTEQRPVLIEMMTYRVGHHSTSDDSTKYRAADEIQYWKMSRNPVNRFRKWV 396 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 N W SE D ++ N RK + +++ A+ ++ EL++D+ Sbjct: 397 EDNGWWSEEDESKLRSNARKQLLQAIQAAEKWEKQPLTELFNDV 440 >gi|260464136|ref|ZP_05812330.1| dehydrogenase E1 component [Mesorhizobium opportunistum WSM2075] gi|259030121|gb|EEW31403.1| dehydrogenase E1 component [Mesorhizobium opportunistum WSM2075] Length = 335 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 150/312 (48%), Gaps = 23/312 (7%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L GFE+ + Y+ M+LIR EE+ +L+ G++ G H IGQEA VG+ + Sbjct: 40 LLGFELPTVAR-----LYQQMILIRLVEERLLELFSQGLLFGTTHTSIGQEANAVGVVNA 94 Query: 99 LT-EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 L + D + + +R HGH +A + ++AE+ GR GI G+GGS H+ +N + + Sbjct: 95 LDRDRDIVWSNHRCHGHFIAYSGEVEGLIAEIMGRVTGICGGRGGSQHL-CFRN--FHSN 151 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GI G + G A A K + VV GDG +G VYES N+A+++ V++V+E+ Sbjct: 152 GIQGGIAPVAVGSALARK--DEGAVAVVFLGDGTMGEGAVYESLNLASVFGAPVLFVVED 209 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N A T+ + + R F I DG D + +AVAY RA P + Sbjct: 210 NDIAQ-TTPKHLTVSGSIIARAEPFGIRTFAYDGNDPVEICELAQEAVAYIRAEGRPCWL 268 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 + T R HS D R E R DPI +R+R+ +EI+ R Sbjct: 269 YLRTERIGPHSKGDDTRPPLRLEQARAR---DPIPPMRQRV--------AQFEEIDAFCR 317 Query: 338 KIINNSVEFAQS 349 ++ +VE A + Sbjct: 318 SAVDRAVESAAA 329 >gi|289426080|ref|ZP_06427827.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes SK187] gi|289427908|ref|ZP_06429612.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes J165] gi|295131605|ref|YP_003582268.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes SK137] gi|289153623|gb|EFD02337.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes SK187] gi|289158791|gb|EFD06991.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes J165] gi|291376272|gb|ADE00127.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes SK137] gi|332676472|gb|AEE73288.1| pyruvate dehydrogenase E1 component subunit alpha [Propionibacterium acnes 266] Length = 381 Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 136/273 (49%), Gaps = 21/273 (7%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + A +M++ RRF+ +A L G +G + L +GQEA G ++L EGDQ+ YRE Sbjct: 57 VKALEMMVMTRRFDVEATALQRHGELGLWPPL-LGQEATQAGAWLALREGDQVFPTYREQ 115 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G A GV +A++ G G S ++ + G G + A + + Sbjct: 116 GLAHAMGVS----LADILGAWDGTSHCGWDTVATHFSAYPVMIGSGTLHA-------VGY 164 Query: 173 ANKYRRS-----DKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 A +R D V+ F GDGA ++G E++ AA N V++V NNQ+A+ Sbjct: 165 AMGVQRDVEAGGDPAAVLDFHGDGAMSEGDTNEAYVFAASMNAPVVFVCVNNQWAISEPT 224 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + S + F +R F IP +QVDG D+ A+ A + A+ Y R+ KGP+ +E TYR Sbjct: 225 TVQSPTSLF-RRATGFGIPAVQVDGNDVIAMMAVLRSALEYARSGKGPVFVEAWTYRMGA 283 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ + DP YRT EE DPI ++R L Sbjct: 284 HTTTDDPTRYRTAEE-ESTWGKTDPIVRLRTYL 315 >gi|116672570|ref|YP_833503.1| pyruvate dehydrogenase (acetyl-transferring) [Arthrobacter sp. FB24] gi|116612679|gb|ABK05403.1| Pyruvate dehydrogenase (acetyl-transferring) [Arthrobacter sp. FB24] Length = 415 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/300 (29%), Positives = 143/300 (47%), Gaps = 16/300 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M IRRF+++A L G + + L GQEA +G + D + YREHG Sbjct: 67 YADMAAIRRFDQEATALQRQGQLALWVPLT-GQEAAQIGSGRASQPQDYIFPTYREHGVA 125 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI---VGAQ--VSLGTGI 170 L VD ++++ + G G K + H+++ H + +G Q L Sbjct: 126 LTRNVDLAELLRQFRGVSNGGWNPKDTNFHLYTLVLAAQTPHAVGYAMGIQRDQKLAAAN 185 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A ++ + +V FGDGA+++G V+ES A+ +N V++ +NN +A+ S Sbjct: 186 ATPDQPQEPKAAVMVYFGDGASSEGDVHESMVFASSYNAPVVFFCQNNHWAISVP-STVQ 244 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + R + PG++VDG D+ AV A + A+ R K P++IE TYR H+ + Sbjct: 245 TRVPLADRAKGYGFPGIRVDGNDVIAVHAVTEWALERAREGKSPVLIEAFTYRVGAHTTA 304 Query: 291 -DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASE-------GDLKEIEMNVRKIINN 342 DP YR +E + R+ DP+E++ K L A + D E+ VRK ++ Sbjct: 305 DDPTKYRGSDEEAQWRAK-DPLERLEKYLRAEGMADDAFFATVKADGDELAAYVRKTTHD 363 >gi|312281515|dbj|BAJ33623.1| unnamed protein product [Thellungiella halophila] Length = 471 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 138/283 (48%), Gaps = 1/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ + +L+ D ++ YRE G +L G + + G + KG+ Sbjct: 157 FYLTSVGEEAINIASAAALSSDDVVLPQYREPGVLLWRGFTLEEFANQCFGNKADYGKGR 216 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S ++ ++ + Q+ G+ ++ K + + V GDG ++G + Sbjct: 217 QMPIHYGSNRHNYFTVSSPIATQLPQAAGVGYSLKMEKKNACAVTFIGDGGTSEGDFHAG 276 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N AA+ V+++ NN +A+ T +S +G ++ I ++VDG D AV + Sbjct: 277 LNFAAVMEAPVVFICRNNGWAISTHISEQFRSDGIVVKGQAYGIRSIRVDGNDALAVYSA 336 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A + P++IE +TYR HS SD + YR +EI + + +P+ + RK + Sbjct: 337 VRSAREMAVTEQRPVLIEAMTYRVGHHSTSDDSTKYRAADEIQYWKMSRNPVNRFRKWVE 396 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 N W SE D ++ N RK + +++ A+ ++ EL++D+ Sbjct: 397 DNGWWSEEDESKLRSNTRKQLLQAIQAAEKWEKQPLIELFNDV 439 >gi|307635072|gb|ADI85407.2| branched-chain 2-oxoacid dehydrogenase complex, E1 protein, alpha subunit, putative [Geobacter sulfurreducens KN400] Length = 352 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/343 (28%), Positives = 163/343 (47%), Gaps = 34/343 (9%) Query: 26 AATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLC 85 AA + D +P L G +Q + LMLL R F+ +A L G +G + + Sbjct: 18 AADGTADEALLPDLSG--------DQLRRLHYLMLLTRTFDRRALALQREGRIGTYPSV- 68 Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 +GQEA VG +L + D + ++RE G L G ++ G + G+ G M+ Sbjct: 69 LGQEAAQVGSAFALQQSDWVFPSFREMGAHLTLGYPVHQLFQYWGGDERGLRTPDG--MN 126 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS-----DKICVVC-FGDGAANQGQVYE 199 +F VS+GT I A + D+ V FGDGA ++G +E Sbjct: 127 LFPIC-------------VSVGTHIPHAAGAALAARARGDRSAVAAYFGDGATSKGDFHE 173 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 FN+A L V+++ +NNQ+A+ ++ +A +++ +++ G+QVDG D+ AV Sbjct: 174 GFNLAGALKLPVVFICQNNQWAISVPLAAQTAAPTLAQKALAYGFEGIQVDGNDVLAVFR 233 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 +A+ R GP IE LTYR H+ +D A+ YR ++ R + DP+ + +R Sbjct: 234 ATGEALVRARDGGGPTFIECLTYRMADHTTADDASRYRPPADVEAWR-DRDPLLRF-ERF 291 Query: 319 LHNKWASEGDL-KEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 L + GD E++ I+ +V +S P+P E+++ Sbjct: 292 LAKRGLWNGDYGAEVQAKAEGEIDEAVRRYESVPPPEPGEMFA 334 >gi|282854856|ref|ZP_06264190.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes J139] gi|282582002|gb|EFB87385.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes J139] Length = 381 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 136/273 (49%), Gaps = 21/273 (7%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + A +M++ RRF+ +A L G +G + L +GQEA G ++L EGDQ+ YRE Sbjct: 57 VKALEMMVMTRRFDVEATALQRHGELGLWPPL-LGQEATQAGAWLALREGDQVFPTYREQ 115 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G A GV +A++ G G S ++ + G G + A + + Sbjct: 116 GLAHAMGVS----LADILGAWDGTSHCGWDTVATHFSAYPVMIGSGTLHA-------VGY 164 Query: 173 ANKYRRS-----DKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 A +R D V+ F GDGA ++G E++ AA N V++V NNQ+A+ Sbjct: 165 AMGVQRDVEAGGDPAAVLDFHGDGAMSEGDTNEAYVFAASMNAPVVFVCVNNQWAISEPT 224 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + S + F +R F IP +QVDG D+ A+ A + A+ Y R+ KGP+ +E TYR Sbjct: 225 TVQSPTSLF-RRATGFGIPAVQVDGNDVIAMMAVLRSALEYARSGKGPVFVEAWTYRMGA 283 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ + DP YRT EE DPI ++R L Sbjct: 284 HTTTDDPTRYRTAEE-ESTWGKTDPIVRLRTYL 315 >gi|229491144|ref|ZP_04384972.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodococcus erythropolis SK121] gi|229321882|gb|EEN87675.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodococcus erythropolis SK121] Length = 375 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/273 (30%), Positives = 136/273 (49%), Gaps = 14/273 (5%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + ++ ++ YR M L RRF+++A L G + + GQEA + MSL D + Sbjct: 42 SDDRLIAMYRKMFLGRRFDQQATALTKQGRLAVYPS-SRGQEACQIAAAMSLEPSDWLFP 100 Query: 108 AYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ + A GVD +I++ L G G S + + Q+ Sbjct: 101 TYRDSMALAARGVDPVQILSMLAGDWHCGYDPVALRSAPQCTP----------LATQLLH 150 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A+ R + + + GDGA ++G +E+ N AA++ VI++++NN +A+ + Sbjct: 151 AAGVAYGESRRGLNTVALALCGDGATSEGDFHEALNFAAVFKAPVIFLVQNNGFAISVPL 210 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 SR SA + +GV + I QVDG D A+ A MD+A + R+ GP+I+E TYR Sbjct: 211 SRQSAAPTLAHKGVGYGIGSEQVDGNDPVAMLAVMDEAARFVRSGNGPVIVEAHTYRIDA 270 Query: 287 HSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 H+ +D A YR E+ E DP+ ++ K L Sbjct: 271 HTNADDATRYRDSAEV-EAWLGRDPLPRLEKYL 302 >gi|88854469|ref|ZP_01129136.1| pyruvate dehydrogenase E1 component, alpha subunit [marine actinobacterium PHSC20C1] gi|88816277|gb|EAR26132.1| pyruvate dehydrogenase E1 component, alpha subunit [marine actinobacterium PHSC20C1] Length = 371 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 95/304 (31%), Positives = 145/304 (47%), Gaps = 32/304 (10%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M+++RRF+ +A L G + + GQEA VG ++ D + +YREH Sbjct: 42 HRHMVVMRRFDIEAANLQRQGQLALWV-PSHGQEAAQVGSALAAKPQDHLFPSYREHVIA 100 Query: 116 LACGVDASKIMAELTG-RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA- 173 L GVD I++ G GG + H+++ ++G+Q TG A Sbjct: 101 LMRGVDPITILSMFRGLSHGGWDPKDHSNFHLYTL---------VIGSQTLHATGYAMGM 151 Query: 174 NKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 N RS D +V FGDG+ +QG V E+ AA + ++ ++NN +A+ V Sbjct: 152 NLEGRSGTGNPDTDAAVMVYFGDGSTSQGDVSEAMVFAASYQTPQVFFLQNNHWAISVPV 211 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 SR S +T RG F IP +Q+DG D+ A A + R+ +GP IE LTYR Sbjct: 212 SRQS-RTPLYLRGEGFGIPSVQIDGNDVLASFAVSQANLDAARSGEGPRFIEALTYRMGA 270 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRL--------LHNKWASEGDLKEIEMNVR 337 H+ S DP+ YR E+ E + DPI + L + A+EGD ++ ++R Sbjct: 271 HTTSDDPSKYRDNSEL-EFWAQRDPITRFETYLRGRGASDDFFAEIATEGD--DLAADIR 327 Query: 338 KIIN 341 K I Sbjct: 328 KRIT 331 >gi|313763731|gb|EFS35095.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL013PA1] gi|313771748|gb|EFS37714.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL074PA1] gi|313793723|gb|EFS41754.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL110PA1] gi|313808442|gb|EFS46909.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL087PA2] gi|313810572|gb|EFS48286.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL083PA1] gi|313813796|gb|EFS51510.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL025PA1] gi|313816951|gb|EFS54665.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL059PA1] gi|313818135|gb|EFS55849.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL046PA2] gi|313820994|gb|EFS58708.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL036PA1] gi|313823935|gb|EFS61649.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL036PA2] gi|313827127|gb|EFS64841.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL063PA1] gi|313829754|gb|EFS67468.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL063PA2] gi|313831611|gb|EFS69325.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL007PA1] gi|313834766|gb|EFS72480.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL056PA1] gi|313839338|gb|EFS77052.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL086PA1] gi|314916511|gb|EFS80342.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL005PA4] gi|314918828|gb|EFS82659.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL050PA1] gi|314921034|gb|EFS84865.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL050PA3] gi|314927019|gb|EFS90850.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL036PA3] gi|314932437|gb|EFS96268.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL067PA1] gi|314956556|gb|EFT00808.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL027PA1] gi|314959545|gb|EFT03647.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL002PA1] gi|314961839|gb|EFT05940.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL002PA2] gi|314964828|gb|EFT08928.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL082PA1] gi|314968668|gb|EFT12766.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL037PA1] gi|314974963|gb|EFT19058.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL053PA1] gi|314977942|gb|EFT22036.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL045PA1] gi|314979568|gb|EFT23662.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL072PA2] gi|314984648|gb|EFT28740.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL005PA1] gi|314988303|gb|EFT32394.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL005PA2] gi|314990392|gb|EFT34483.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL005PA3] gi|315079209|gb|EFT51212.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL053PA2] gi|315082328|gb|EFT54304.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL078PA1] gi|315083702|gb|EFT55678.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL027PA2] gi|315087342|gb|EFT59318.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL002PA3] gi|315089759|gb|EFT61735.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL072PA1] gi|315095533|gb|EFT67509.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL038PA1] gi|315100206|gb|EFT72182.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL059PA2] gi|315102529|gb|EFT74505.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL046PA1] gi|315109552|gb|EFT81528.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL030PA2] gi|327326578|gb|EGE68366.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL096PA3] gi|327332842|gb|EGE74574.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL096PA2] gi|327335238|gb|EGE76948.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL097PA1] gi|327447668|gb|EGE94322.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL043PA2] gi|327448541|gb|EGE95195.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL043PA1] gi|327449604|gb|EGE96258.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL013PA2] gi|327455854|gb|EGF02509.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL087PA3] gi|327456054|gb|EGF02709.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL092PA1] gi|327458005|gb|EGF04660.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL083PA2] gi|328757169|gb|EGF70785.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL087PA1] gi|328757360|gb|EGF70976.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL020PA1] gi|328757549|gb|EGF71165.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL025PA2] gi|328762121|gb|EGF75626.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL099PA1] Length = 351 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 136/273 (49%), Gaps = 21/273 (7%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + A +M++ RRF+ +A L G +G + L +GQEA G ++L EGDQ+ YRE Sbjct: 27 VKALEMMVMTRRFDVEATALQRHGELGLWPPL-LGQEATQAGAWLALREGDQVFPTYREQ 85 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G A GV +A++ G G S ++ + G G + A + + Sbjct: 86 GLAHAMGVS----LADILGAWDGTSHCGWDTVATHFSAYPVMIGSGTLHA-------VGY 134 Query: 173 ANKYRRS-----DKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 A +R D V+ F GDGA ++G E++ AA N V++V NNQ+A+ Sbjct: 135 AMGVQRDVEAGGDPAAVLDFHGDGAMSEGDTNEAYVFAASMNAPVVFVCVNNQWAISEPT 194 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + S + F +R F IP +QVDG D+ A+ A + A+ Y R+ KGP+ +E TYR Sbjct: 195 TVQSPTSLF-RRATGFGIPAVQVDGNDVIAMMAVLRSALEYARSGKGPVFVEAWTYRMGA 253 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ + DP YRT EE DPI ++R L Sbjct: 254 HTTTDDPTRYRTAEE-ESTWGKTDPIVRLRTYL 285 >gi|297197041|ref|ZP_06914438.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sviceus ATCC 29083] gi|197715696|gb|EDY59730.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sviceus ATCC 29083] Length = 370 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 85/312 (27%), Positives = 147/312 (47%), Gaps = 12/312 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+AYR M++ RRF+ +A L G + +GQEA +G ++L D + YR+ Sbjct: 49 LTAYRKMVVGRRFDAQATTLARQGRLAVHPS-SLGQEACQIGAVLALRPSDWLFPTYRDC 107 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 +++ G+D + + L +G G H + + H + TG+A Sbjct: 108 TALVSRGIDPVEALTLL---RGDGHCGYDPISHHTAPQCTPLATHA------AHATGLAH 158 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 + + +D + + GDGA ++G +E+ +A + V+++++NN+YA+ + SA Sbjct: 159 GERLKGTDTVALALVGDGATSEGDFHEALGLAGVLRAPVVFLVQNNRYAISVPFAAQSAA 218 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-SMSD 291 + + +GV + + QVDG D AV A + KAV RA GP ++E TYR H S D Sbjct: 219 PSLAYKGVGYGVRSEQVDGNDAAAVLAVLTKAVEDARAGGGPWLVEAHTYRVAPHTSADD 278 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 P+ YR EE + R DPI+++ L + +E D+ + D Sbjct: 279 PSRYRPAEEAEQWRER-DPIDRLESWLREHGLLTEDDIAAVAAAAEAYAAEVRTRFTEDP 337 Query: 352 EPDPAELYSDIL 363 + DP L+ + Sbjct: 338 DLDPLGLFDHVF 349 >gi|289583587|ref|YP_003481997.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Natrialba magadii ATCC 43099] gi|289533085|gb|ADD07435.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Natrialba magadii ATCC 43099] Length = 382 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 82/317 (25%), Positives = 154/317 (48%), Gaps = 20/317 (6%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 ++ Y + L RRF+++A L G + + + GQE V +L D ++ YREH Sbjct: 47 IAMYEDIKLARRFDQRAISLQRQGRIATYAPMT-GQEGAQVATGYALAAQDWLLPTYREH 105 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G+D + ++ L G + G + + + QV TG+A+ Sbjct: 106 AAKYVHGMDLASLLKPLCGLREG---------YAIPDDVNVMPEYIPIATQVPQATGMAW 156 Query: 173 ANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + + V+C FGDGA ++G +E N A ++++ ++V NNQ+A+ +A Sbjct: 157 GKQRQGETDTAVLCHFGDGATSEGDFHEGLNFAGVFDVPTVFVCNNNQWAISVPREHQTA 216 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAV----KATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +++ ++ I G++VDG+D AV +A + KA + P +IE + YRY H Sbjct: 217 SETIAQKAAAYGIEGVRVDGLDPLAVYAVTRAALQKAKNPADDERRPTLIEAVQYRYGAH 276 Query: 288 SMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK-EIEMNVRKIINNSVE 345 + + DP+ YR +E + R DP++++ + L N+ + DL+ EI+ + + +VE Sbjct: 277 TTADDPSTYREEDEAEDWREK-DPLDRM-QNFLTNRGLLDDDLEAEIDERIETQLTEAVE 334 Query: 346 FAQSDKEPDPAELYSDI 362 ++ DPA ++ + Sbjct: 335 SVEA-ATTDPATMFDHV 350 >gi|325183483|emb|CCA17943.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 685 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 7/316 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 44 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 102 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 103 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 162 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 163 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 222 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 223 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 282 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN--VRKIINNSVEF 346 + YR E++ + DPI +V++ L+ + W SE L+E E N +K + + Sbjct: 283 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERNKMSKKRKQKNDDR 342 Query: 347 AQSDKEPDPAELYSDI 362 Q K+ A +Y D+ Sbjct: 343 QQRKKKSGDAIMYKDL 358 >gi|261405972|ref|YP_003242213.1| 3-methyl-2-oxobutanoate dehydrogenase [Paenibacillus sp. Y412MC10] gi|261282435|gb|ACX64406.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Paenibacillus sp. Y412MC10] Length = 342 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 128/256 (50%), Gaps = 5/256 (1%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAY 109 Q L Y+ M+L R+F+E+ L G + F IGQEA V +L E D + Y Sbjct: 23 QVLDMYKYMVLARKFDERNLLLQRAGKIN-FHVSGIGQEACQVAAAFALDREKDYFLPYY 81 Query: 110 REHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 R++G +LA G+ ++M + + S G+ H S + G V QV Sbjct: 82 RDYGFVLAVGMTPRELMLSAFAKAEDPNSGGRQMPGHFGSKRLRIVTGSSPVTTQVPHAV 141 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 GIA A K ++ D + V FG+G++NQG +E N A + L VI + ENNQYA+ + + Sbjct: 142 GIALAAKMQKKDFVSFVTFGEGSSNQGDFHEGCNFAGVHKLPVIIMCENNQYAISVPLHK 201 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 S R + + PG++VDG D V A + +A +GP +IE + YR HS Sbjct: 202 -QISGKVSDRALGYGFPGVRVDGNDALEVYAAVKEARERAIRGEGPTLIESMMYRLSPHS 260 Query: 289 MSD-PANYRTREEINE 303 SD YRT+EE+ E Sbjct: 261 TSDNDLAYRTKEEVEE 276 >gi|163841387|ref|YP_001625792.1| pyruvate dehydrogenase E1 component alpha subunit [Renibacterium salmoninarum ATCC 33209] gi|162954863|gb|ABY24378.1| pyruvate dehydrogenase E1 component alpha subunit [Renibacterium salmoninarum ATCC 33209] Length = 392 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 85/308 (27%), Positives = 147/308 (47%), Gaps = 12/308 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L AY +++ RRF ++ L G + + GQEA V + L EGD + YR+ Sbjct: 67 LEAYAQLVIGRRFNDQNSALVRQGRMAVYPS-SHGQEACQVAAALCLDEGDWLFPTYRDA 125 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 +++ GVD + M G G + + T + Q+ G+A Sbjct: 126 VAVMSRGVDPVEAMTLFRGDWHGGYDPMKYKVGIQCTP---------LTTQLLHAVGVAH 176 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R + + + GDGA ++G +E+ N AA++NL VI+ ++NN+YA+ +++ S Sbjct: 177 AAKLRGENTVVMALCGDGATSEGDFHEALNFAAVFNLPVIFFVQNNKYAISVPLAQQSVA 236 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + + + V + + G VDG D+ A+ A + +AVA R GP+++E TYR + H+ +D Sbjct: 237 PSLAHKAVGYGMAGEHVDGNDVVALLAVLKRAVALAREGSGPLLVEANTYRIQSHTNADD 296 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 A YR E+ E DP+ ++R L + EI + + S+ Sbjct: 297 ATRYRQDSEVAEWLEK-DPVARMRAFLRAEALLDDDGEAEIVARAEIVATQLRDGMNSEP 355 Query: 352 EPDPAELY 359 + DP +L+ Sbjct: 356 DIDPQDLF 363 >gi|325183497|emb|CCA17957.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 683 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 7/316 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 44 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 102 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 103 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 162 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 163 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 222 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 223 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 282 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN--VRKIINNSVEF 346 + YR E++ + DPI +V++ L+ + W SE L+E E N +K + + Sbjct: 283 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERNKMSKKRKQKNDDR 342 Query: 347 AQSDKEPDPAELYSDI 362 Q K+ A +Y D+ Sbjct: 343 QQRKKKSGDAIMYKDL 358 >gi|314924330|gb|EFS88161.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL001PA1] gi|314965857|gb|EFT09956.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL082PA2] gi|314981581|gb|EFT25674.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL110PA3] gi|315092344|gb|EFT64320.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL110PA4] gi|315094791|gb|EFT66767.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL060PA1] gi|327328639|gb|EGE70399.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL103PA1] Length = 351 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 136/273 (49%), Gaps = 21/273 (7%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + A +M++ RRF+ +A L G +G + L +GQEA G ++L EGDQ+ YRE Sbjct: 27 VKALEMMVMTRRFDVEATALQRHGELGLWPPL-LGQEATQAGAWLALREGDQVFPTYREQ 85 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G A GV +A++ G G S ++ + G G + A + + Sbjct: 86 GLAHAMGVS----LADILGAWDGTSHCGWDTVATHFSAYPVMIGSGTLHA-------VGY 134 Query: 173 ANKYRRS-----DKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 A +R D V+ F GDGA ++G E++ AA N V++V NNQ+A+ Sbjct: 135 AMGVQRDVEAGGDPAAVLDFHGDGAMSEGDTNEAYVFAASMNAPVVFVCVNNQWAISEPT 194 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + S + F +R F IP +QVDG D+ A+ A + A+ Y R+ KGP+ +E TYR Sbjct: 195 TVQSPTSLF-RRATGFGIPAVQVDGNDVIAMMAVLRSALEYARSGKGPVFVEAWTYRMGA 253 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ + DP YRT EE DPI ++R L Sbjct: 254 HTTTDDPTRYRTAEE-ESTWGKTDPIVRLRTYL 285 >gi|325183500|emb|CCA17960.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 685 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 7/316 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 44 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 102 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 103 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 162 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 163 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 222 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 223 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 282 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN--VRKIINNSVEF 346 + YR E++ + DPI +V++ L+ + W SE L+E E N +K + + Sbjct: 283 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERNKMSKKRKQKNDDR 342 Query: 347 AQSDKEPDPAELYSDI 362 Q K+ A +Y D+ Sbjct: 343 QQRKKKSGDAIMYKDL 358 >gi|325183489|emb|CCA17949.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 687 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 7/316 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 44 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 102 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 103 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 162 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 163 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 222 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 223 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 282 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN--VRKIINNSVEF 346 + YR E++ + DPI +V++ L+ + W SE L+E E N +K + + Sbjct: 283 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERNKMSKKRKQKNDDR 342 Query: 347 AQSDKEPDPAELYSDI 362 Q K+ A +Y D+ Sbjct: 343 QQRKKKSGDAIMYKDL 358 >gi|325183491|emb|CCA17951.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 656 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 5/287 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 44 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 102 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 103 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 162 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 163 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 222 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 223 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 282 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN 335 + YR E++ + DPI +V++ L+ + W SE L+E E N Sbjct: 283 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERN 329 >gi|325183492|emb|CCA17952.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 658 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 5/287 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 44 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 102 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 103 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 162 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 163 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 222 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 223 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 282 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN 335 + YR E++ + DPI +V++ L+ + W SE L+E E N Sbjct: 283 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERN 329 >gi|299822500|ref|ZP_07054386.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria grayi DSM 20601] gi|299816029|gb|EFI83267.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria grayi DSM 20601] Length = 371 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 92/324 (28%), Positives = 158/324 (48%), Gaps = 21/324 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + +Q + M+ R ++++ L G +G F GQEA + +L + D Sbjct: 41 MPDLTDDQLVELMTRMVWTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHYALEKQD 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ +K A L R + +++ S + I+GAQ Sbjct: 100 YILPGYRDVPQLIWHGLPLTK--AFLFSRGHFVGNQFPDDLNVLSPQI-------IIGAQ 150 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K R+ D + + GDG ++QG YE N A ++ I+V++NN +A+ Sbjct: 151 IVQAAGVALGLKKRKKDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNNMFAIS 210 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + +A +++ V+ IPG+QVDGMD AV A A A GP +IE +TYR Sbjct: 211 TPREKQTAAVTLAQKAVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGDGPTLIETMTYR 270 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKI 339 Y H++S DP YRT++ +E DPI + R L K W E + + IE ++ Sbjct: 271 YGPHTLSGDDPTRYRTKDLDSEWELK-DPIVRFRT-FLEGKGLWNEEKENEVIE-KAKEE 327 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 I +++ A + P + +D+L Sbjct: 328 IKTAIKEADA----TPKQKVTDLL 347 >gi|325183495|emb|CCA17955.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 660 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 5/287 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 44 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 102 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 103 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 162 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 163 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 222 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 223 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 282 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN 335 + YR E++ + DPI +V++ L+ + W SE L+E E N Sbjct: 283 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERN 329 >gi|240047196|ref|YP_002960584.1| Pyruvate dehydrogenase E1-alpha subunit [Mycoplasma conjunctivae HRC/581] gi|239984768|emb|CAT04742.1| Pyruvate dehydrogenase E1-alpha subunit [Mycoplasma conjunctivae] Length = 376 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/292 (28%), Positives = 146/292 (50%), Gaps = 12/292 (4%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 AY M+L R+ +E QL G + F G+EA+ V M++ + D + A+R + Sbjct: 54 AYEFMVLSRQQDEYMTQLQRQGRMLTFAP-NFGEEALQVAAAMAMKKEDWFVPAFRSNAA 112 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +L GV M G + G +G ++ + +G Q S GIA+A+ Sbjct: 113 MLYLGVPMLNQMQYWNGSEKGNIIPEGVNVLPINIP---------IGTQFSHAAGIAYAS 163 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + I V G+G +G+ YE+ N+A++W V++ + NNQ+A+ T +A Sbjct: 164 KLTGKNYISVSFIGNGGTAEGEFYEALNMASIWKWPVVFCVNNNQWAISTPNKYENAAPT 223 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 + + ++ IPG++VDG D+ A M +A Y R+ GP+++E +T+R H+ SD P Sbjct: 224 IAAKALAAGIPGVRVDGNDLLASYEVMKEAAEYARSGNGPVLVEFVTWRQGVHTSSDNPR 283 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 YRT EE E P+ ++ K + N + D ++I + ++++ + E Sbjct: 284 IYRTLEEEQEKEKWE-PMHRIEKYMYDNGIITPSDKEKITADAKEVVKATYE 334 >gi|16078522|ref|NP_389341.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus subtilis subsp. subtilis str. 168] gi|221309328|ref|ZP_03591175.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus subtilis subsp. subtilis str. 168] gi|221313655|ref|ZP_03595460.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318577|ref|ZP_03599871.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus subtilis subsp. subtilis str. JH642] gi|221322851|ref|ZP_03604145.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus subtilis subsp. subtilis str. SMY] gi|296331512|ref|ZP_06873983.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674185|ref|YP_003865857.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus subtilis subsp. spizizenii str. W23] gi|321315217|ref|YP_004207504.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus subtilis BSn5] gi|3123238|sp|P21881|ODPA_BACSU RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha; AltName: Full=S complex, 42 kDa subunit; AltName: Full=Vegetative protein 220; Short=VEG220 gi|2633829|emb|CAB13331.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus subtilis subsp. subtilis str. 168] gi|3282142|gb|AAC24932.1| pyruvate decarboxylase E-1 alpha subunit [Bacillus subtilis] gi|296151325|gb|EFG92203.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412429|gb|ADM37548.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus subtilis subsp. spizizenii str. W23] gi|320021491|gb|ADV96477.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus subtilis BSn5] Length = 371 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 94/301 (31%), Positives = 147/301 (48%), Gaps = 19/301 (6%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 54 RRMVFTRVLDQRSISLNRQGRLG-FYAPTAGQEASQIATHFALEKEDFVLPGYRDVPQLI 112 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G+ + S+G M N I+GAQ G+A K Sbjct: 113 WHGLPLYQAFL--------FSRGHFRGNQMPDDVNAL-SPQIIIGAQYIQTAGVALGLKK 163 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R + + GDG A+QG YE N A + I+V++NN+YA+ T V + SA + Sbjct: 164 RGKKAVAITYTGDGGASQGDFYEGINFAGAYKAPAIFVVQNNRYAISTPVEKQSAAETIA 223 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPAN 294 ++ V+ I G+QVDGMD AV A +A +GP +IE LT+RY H+M+ DP Sbjct: 224 QKAVAAGIVGVQVDGMDPLAVYAATAEARERAINGEGPTLIETLTFRYGPHTMAGDDPTK 283 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YRT+E NE DP+ + R L NK W+ E + K IE + ++ I +++ ++D E Sbjct: 284 YRTKEIENEWEQK-DPLVRFRA-FLENKGLWSEEEEAKVIE-DAKEEIKQAIK--KADAE 338 Query: 353 P 353 P Sbjct: 339 P 339 >gi|39997748|ref|NP_953699.1| pyruvate dehydrogenase complex E1 component subunit alpha [Geobacter sulfurreducens PCA] gi|39984640|gb|AAR36026.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Geobacter sulfurreducens PCA] Length = 352 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/343 (28%), Positives = 162/343 (47%), Gaps = 34/343 (9%) Query: 26 AATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLC 85 AA + D +P L G +Q + LMLL R F+ +A L G +G + + Sbjct: 18 AADGTADEALLPDLSG--------DQLRRLHYLMLLTRTFDRRALALQREGRIGTYPSV- 68 Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 +GQEA VG +L D + ++RE G L G ++ G + G+ G M+ Sbjct: 69 LGQEAAQVGSAFALQPSDWVFPSFREMGAHLTLGYPVHQLFQYWGGDERGLRTPDG--MN 126 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS-----DKICVVC-FGDGAANQGQVYE 199 +F VS+GT I A + D+ V FGDGA ++G +E Sbjct: 127 LFPIC-------------VSVGTHIPHAAGAALAARARGDRSAVAAYFGDGATSKGDFHE 173 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 FN+A L V+++ +NNQ+A+ ++ +A +++ +++ G+QVDG D+ AV Sbjct: 174 GFNLAGALKLPVVFICQNNQWAISVPLAAQTAAPTLAQKALAYGFEGIQVDGNDVLAVFR 233 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 +A+ R GP IE LTYR H+ +D A+ YR ++ R + DP+ + +R Sbjct: 234 ATGEALVRARDGGGPTFIECLTYRMADHTTADDASRYRPPADVEAWR-DRDPLLRF-ERF 291 Query: 319 LHNKWASEGDL-KEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 L + GD E++ I+ +V +S P+P E+++ Sbjct: 292 LAKRGLWNGDYGAEVQAKAEGEIDEAVRRYESVPPPEPGEMFA 334 >gi|325183498|emb|CCA17958.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 658 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 5/287 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 44 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 102 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 103 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 162 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 163 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 222 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 223 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 282 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN 335 + YR E++ + DPI +V++ L+ + W SE L+E E N Sbjct: 283 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERN 329 >gi|269957992|ref|YP_003327781.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Xylanimonas cellulosilytica DSM 15894] gi|269306673|gb|ACZ32223.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Xylanimonas cellulosilytica DSM 15894] Length = 373 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/284 (29%), Positives = 137/284 (48%), Gaps = 21/284 (7%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V+ + + YR M+L R F+++A L G + F GQEA VG +L D Sbjct: 34 VAHLTADHLRAMYRDMVLTRCFDDEATALQRQGELALFAQ-ARGQEAAQVGSAHALAPQD 92 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +YREHG + GVD + G G + + H+++ ++G+Q Sbjct: 93 YVFPSYREHGVLHVRGVDPIDRLRLYRGEDHGGWDPREHNAHLYTL---------VLGSQ 143 Query: 164 VSLGTGIAFANKY--------RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 V TG A + D V FGDG +QG V+E+ AA+ + ++ + Sbjct: 144 VLHATGYAMGVQRDGLVGTGDPTRDTAVVAYFGDGTTSQGDVHEAMVFAAVNDAPTVFFL 203 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +NNQ+A+ +R A+ + RG+ + IP ++VDG D+ A A +A+ + GP Sbjct: 204 QNNQWAISEPTTR-QAKVPLANRGLGYGIPSVRVDGNDVLACYAVTLEALERAHSGGGPT 262 Query: 276 IIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 +IE TYR H+ S DP YR+REE + R DP++++ L Sbjct: 263 LIEAFTYRMGAHTTSDDPTRYRSREEEDYWRRR-DPLDRLEAHL 305 >gi|195108133|ref|XP_001998647.1| GI24087 [Drosophila mojavensis] gi|193915241|gb|EDW14108.1| GI24087 [Drosophila mojavensis] Length = 435 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/310 (27%), Positives = 148/310 (47%), Gaps = 4/310 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R MLL+ ++ + G + F G+EA +G +L D + YRE G + Sbjct: 94 FRDMLLLSTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAALEMRDVIYGQYREAGVL 152 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G + + + G + +GK +H S + F + Q+ G A+A K Sbjct: 153 VWRGFRIDQFIDQCYGNDDDLGRGKQMPVHYGSKELNFVTISSPLSTQIPQAVGAAYALK 212 Query: 176 YRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + ++ CVVC FG+GAA++G + +FN AA VI+ NN +A+ T + Sbjct: 213 RKPNNDSCVVCYFGEGAASEGDAHAAFNFAATLECPVIFFCRNNGFAISTPSNEQYRGDG 272 Query: 235 FSKRG-VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + RG + + I ++VDG D+ AV M +A Y P+++E L YR HS SD + Sbjct: 273 IAGRGPMGYGIATVRVDGTDVFAVYNAMKRAREYVLRENKPVVLEALAYRVSHHSTSDDS 332 Query: 294 N-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR+ EEI + PI +++ ++H W +E + E VRK + + ++ + Sbjct: 333 TAYRSAEEIEMWNTLEHPISKLKSYMVHKGWFNEKEETEFVSGVRKQVLKQIAISEKKLK 392 Query: 353 PDPAELYSDI 362 P+ E++ + Sbjct: 393 PNWREMFEGV 402 >gi|72044641|ref|XP_788716.1| PREDICTED: similar to 2-oxoisovalerate dehydrogenase alpha subunit [Strongylocentrotus purpuratus] gi|115941485|ref|XP_001181566.1| PREDICTED: similar to 2-oxoisovalerate dehydrogenase alpha subunit [Strongylocentrotus purpuratus] Length = 411 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 82/278 (29%), Positives = 136/278 (48%), Gaps = 3/278 (1%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+E VG +L + D + YRE G IL G K M + G ++KG+ +H Sbjct: 100 GEEGTHVGSAAALNDKDIVFGQYREAGVILWRGFSLEKAMNQCYGNCNDLAKGRQMPVHY 159 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAA 205 S ++ F + Q+ +G A+A K R +CV+C FGDGAA++G + +FN AA Sbjct: 160 GSKEHHFMTISSPLATQMPHASGAAYALK-RAGRDLCVMCYFGDGAASEGDAHAAFNFAA 218 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + VI+ NN YA+ T + + RG ++ + ++VDG D+ AV A Sbjct: 219 TLDAPVIFFCRNNGYAISTPTAEQYRGDGIAIRGPAYGMNTIRVDGNDVFAVYNATKAAR 278 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 P++IE +TYR HS SD ++ YR+ +E+ S PI ++R+ ++ +W Sbjct: 279 KIAVEESKPVLIEAMTYRIGHHSTSDDSSAYRSVDEVRYWDSEDHPIGRLRRYMMQKEWW 338 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 K +K + + A+ K+P P + +D+ Sbjct: 339 DIDTEKAWMAETKKDVLQEFQAAEKLKKPSPNHMLTDV 376 >gi|82751122|ref|YP_416863.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus RF122] gi|82656653|emb|CAI81079.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus RF122] Length = 330 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 134/306 (43%), Gaps = 3/306 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM +L EGD YR+ + Sbjct: 18 YKWMDLGRKIDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYALEEGDITAPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ A G++ + S GK H S V Q+ G A A Sbjct: 77 TYMGISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSSPVATQIPHAVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K KI G+G++NQG +E N A + L + VI NN+YA+ S A Sbjct: 137 KMDGKKKIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + I G QVDG D A+ M +A + +G +IE +T R HS D Sbjct: 197 LSDRALGYGIHGEQVDGNDPLAMYKAMKEARDRAISGQGSTLIEAVTSRMTAHSSDDDDQ 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE E D E+ +K LL + L EIE + IIN + + A+ P Sbjct: 257 YRTKEE-REALKKADCNEKFKKELLSADIIDDAWLAEIEAEHKDIINKATKAAEDAPYPS 315 Query: 355 PAELYS 360 E Y+ Sbjct: 316 VEEAYA 321 >gi|325183499|emb|CCA17959.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 784 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 7/316 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 143 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 201 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 202 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 261 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 262 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 321 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 322 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 381 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN--VRKIINNSVEF 346 + YR E++ + DPI +V++ L+ + W SE L+E E N +K + + Sbjct: 382 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERNKMSKKRKQKNDDR 441 Query: 347 AQSDKEPDPAELYSDI 362 Q K+ A +Y D+ Sbjct: 442 QQRKKKSGDAIMYKDL 457 >gi|298208751|ref|YP_003716930.1| putative oxidoreductase [Croceibacter atlanticus HTCC2559] gi|83848678|gb|EAP86547.1| putative oxidoreductase [Croceibacter atlanticus HTCC2559] Length = 668 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 78/285 (27%), Positives = 137/285 (48%), Gaps = 7/285 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E+ L Y ML R EEK L G + + IGQEA+ G+ ++L + + ++ Sbjct: 18 LSNEELLKLYLAMLKPRLIEEKMLILLRQGKISKWFS-GIGQEAISAGVTLALQKEEYIL 76 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +R G + + ++ + G+ G +KG+ S H + + G +G Q+ + Sbjct: 77 PMHRNLGVFVNRDIPLYRLFTQWQGKASGFTKGRDRSFHFGTQEFNIVGMISHLGPQLGV 136 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GIA A+K + I V G+G ++G +E+ N+A++W+L V++ IENN Y + T Sbjct: 137 ADGIALAHKLKNEKNITAVFTGEGGTSEGDFHEALNVASVWDLPVLFCIENNGYGLSTPT 196 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + N + RG+ + + +DG +I V + R + P+++E LT+R RG Sbjct: 197 TEQYRCENLADRGLGYGMESHIIDGNNILEVYQKVSALAESMRENPRPVLVEFLTFRRRG 256 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 H + Y E++ E DPI + L+ +EG L E Sbjct: 257 HEEASGTKY-VPEDLMEAWELKDPISNYKDFLI-----AEGILTE 295 >gi|325183493|emb|CCA17953.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 757 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 5/287 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 143 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 201 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 202 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 261 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 262 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 321 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 322 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 381 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN 335 + YR E++ + DPI +V++ L+ + W SE L+E E N Sbjct: 382 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERN 428 >gi|325183485|emb|CCA17945.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 755 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 5/287 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 143 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 201 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 202 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 261 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 262 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 321 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 322 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 381 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN 335 + YR E++ + DPI +V++ L+ + W SE L+E E N Sbjct: 382 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERN 428 >gi|325183484|emb|CCA17944.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 782 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 7/316 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 143 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 201 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 202 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 261 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 262 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 321 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 322 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 381 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN--VRKIINNSVEF 346 + YR E++ + DPI +V++ L+ + W SE L+E E N +K + + Sbjct: 382 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERNKMSKKRKQKNDDR 441 Query: 347 AQSDKEPDPAELYSDI 362 Q K+ A +Y D+ Sbjct: 442 QQRKKKSGDAIMYKDL 457 >gi|291484003|dbj|BAI85078.1| pyruvate dehydrogenase E1 alpha subunit [Bacillus subtilis subsp. natto BEST195] Length = 371 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 94/301 (31%), Positives = 147/301 (48%), Gaps = 19/301 (6%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 54 RRMVFTRVLDQRSISLNRQGRLG-FYAPTAGQEASQIATHFALEKEDFVLPGYRDVPQLI 112 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G+ + S+G M N I+GAQ G+A K Sbjct: 113 WHGLPLYQAFL--------FSRGHFRGNQMPDDVNAL-SPQIIIGAQYIQTAGVALGIKK 163 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R + + GDG A+QG YE N A + I+V++NN+YA+ T V + SA + Sbjct: 164 RGKKAVAITYTGDGGASQGDFYEGINFAGAYKAPAIFVVQNNRYAISTPVEKQSAAETIA 223 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPAN 294 ++ V+ I G+QVDGMD AV A +A +GP +IE LT+RY H+M+ DP Sbjct: 224 QKAVAAGIVGVQVDGMDPLAVYAATAEARERAINGEGPTLIETLTFRYGPHTMAGDDPTK 283 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YRT+E NE DP+ + R L NK W+ E + K IE + ++ I +++ ++D E Sbjct: 284 YRTKEIENEWEQK-DPLVRFRA-FLENKGLWSEEEEAKVIE-DAKEEIKQAIK--KADAE 338 Query: 353 P 353 P Sbjct: 339 P 339 >gi|302552755|ref|ZP_07305097.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces viridochromogenes DSM 40736] gi|302470373|gb|EFL33466.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces viridochromogenes DSM 40736] Length = 383 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/301 (26%), Positives = 140/301 (46%), Gaps = 12/301 (3%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR+ +A L G + + GQEA V M L E D + +YR+ ++A GVD Sbjct: 61 RRYNAQATALTKQGRLAVYPS-TTGQEACEVAAAMVLEERDWLFPSYRDTLAVVARGVDP 119 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 + + L +G G H + + + Q+ G+A A + + D + Sbjct: 120 VQALTLL---RGDWHTGYDPYEHRVTPLST------PLATQLPHAVGLAHAARLKGDDVV 170 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 + GDG ++G +E+ N AA+W V+++++NN +A+ +++ +A + + + V + Sbjct: 171 ALAMVGDGGTSEGDFHEALNFAAVWQAPVVFLVQNNGFAISVPLAKQTAAPSLAHKAVGY 230 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEI 301 +PG VDG D AV + AV + RA GP ++E +TYR H+ +D A YR E+ Sbjct: 231 GMPGRLVDGNDAAAVHEVLSDAVRHARAGGGPTLVEAITYRVDAHTNADDATRYRGDAEV 290 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 R HDPI+ + + L E + + + E D DP +L++ Sbjct: 291 ETWR-EHDPIQLLERELTARGLLDEAGKQAARDAAEAMAASLREHMNQDPALDPMDLFTH 349 Query: 362 I 362 + Sbjct: 350 V 350 >gi|90420470|ref|ZP_01228377.1| 2-oxoisovalerate dehydrogenase, E1 component (alpha subunit) [Aurantimonas manganoxydans SI85-9A1] gi|90335198|gb|EAS48951.1| 2-oxoisovalerate dehydrogenase, E1 component (alpha subunit) [Aurantimonas manganoxydans SI85-9A1] Length = 410 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 82/284 (28%), Positives = 139/284 (48%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E+ L+ + M+ +R F+ + G F C+G+EA+ + +L GD Sbjct: 72 LSDEEVLAGLKTMMRVRAFDRRMLMAQRQGKTS-FYMQCLGEEAIACAFRKALGPGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q Sbjct: 131 PTYRQQGLLIADDYPLVDMMCQIYSNRRDPLKGRQLPIMYSSKEHGFFSISGNLATQFVQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G G A A+ + +I GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 GVGWAMASAIKGDHRIAAAWIGDGSTAESDFHSAMVFASTYKAPVVLNIVNNQWAISTYQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG+ F IP ++VDG D AV A AV R + GP +IE +TYR Sbjct: 251 GIARGGSGT-FAARGLGFGIPSLRVDGNDYLAVHAASKWAVERARRNLGPTLIEWVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASE 326 HS S DP+ YR +EE + DP+++++ L L W+ E Sbjct: 310 AAHSTSDDPSAYRPKEETDAWPLG-DPVKRLKNHLILKEVWSEE 352 >gi|311067974|ref|YP_003972897.1| PdhA protein [Bacillus atrophaeus 1942] gi|310868491|gb|ADP31966.1| PdhA [Bacillus atrophaeus 1942] Length = 371 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 93/301 (30%), Positives = 147/301 (48%), Gaps = 19/301 (6%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 54 RRMVFTRVLDQRSISLNRQGRLG-FYAPTAGQEASQIATHFALEKEDFVLPGYRDVPQLI 112 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G+ + S+G M N I+GAQ G+A K Sbjct: 113 WHGLPLYQAFL--------FSRGHFRGNQMPDDVNAL-SPQIIIGAQYIQTAGVALGLKK 163 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R + + GDG A+QG YE N A + I+V++NN+YA+ T V + SA + + Sbjct: 164 RGKKAVAITYTGDGGASQGDFYEGINFAGAYKAPAIFVVQNNRYAISTPVEKQSAASTIA 223 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPAN 294 ++ + I G+QVDGMD AV A +A +GP +IE LT+RY H+M+ DP Sbjct: 224 QKAAAAGIVGVQVDGMDALAVYAATAEARERAVNGEGPTLIETLTFRYGPHTMAGDDPTK 283 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YRT+E NE DP+ + R L NK W+ E + K IE ++ I +++ ++D+E Sbjct: 284 YRTKEIENEW-EQKDPLVRFRA-FLENKGLWSEEEETKVIEA-AKEEIKQAIK--KADEE 338 Query: 353 P 353 P Sbjct: 339 P 339 >gi|325183488|emb|CCA17948.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 784 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 7/316 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 143 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 201 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 202 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 261 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 262 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 321 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 322 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 381 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN--VRKIINNSVEF 346 + YR E++ + DPI +V++ L+ + W SE L+E E N +K + + Sbjct: 382 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERNKMSKKRKQKNDDR 441 Query: 347 AQSDKEPDPAELYSDI 362 Q K+ A +Y D+ Sbjct: 442 QQRKKKSGDAIMYKDL 457 >gi|300789395|ref|YP_003769686.1| pyruvate dehydrogenase E1 component subunit alpha [Amycolatopsis mediterranei U32] gi|299798909|gb|ADJ49284.1| pyruvate dehydrogenase E1 component subunit alpha [Amycolatopsis mediterranei U32] Length = 361 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/316 (27%), Positives = 148/316 (46%), Gaps = 26/316 (8%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 AYRLM+L RRF+ +A L G + + GQEA V ++L D + YR+ Sbjct: 43 AYRLMVLGRRFDVQATALTKQGRLAVYPS-SAGQEACQVAAALTLETRDWLFPTYRDSVA 101 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS-LGT----- 168 ++A G+ +++ L G G+ V Q + L T Sbjct: 102 LVARGLKPGEVLTLLRG----------------DAHCGYNPVETRVAPQCTPLATQTLHA 145 Query: 169 -GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+A A + R D + + GDGA ++G +E+ N AA++ V++ ++NN++A+ Sbjct: 146 AGLAHAMQRRGEDAVALALIGDGATSEGDFHEALNFAAVFKAPVVFFVQNNRFAISVPFE 205 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + SA + +GV + + QVDG D AV A +D AV + R KGP+++E TYR H Sbjct: 206 KQSAAAALAYKGVGYGMRSEQVDGNDAVAVLAVLDDAVKHAREGKGPVLVEAHTYRIDAH 265 Query: 288 SMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + +D A YR EE+ + R DP++++ L + +++ + + Sbjct: 266 TNADDATRYRDAEEVAKWREA-DPLKRLETFLKSRNLLQDTEIERFAAAAEVFAQSVRDT 324 Query: 347 AQSDKEPDPAELYSDI 362 ++ E DP L+ + Sbjct: 325 LNTEPELDPLSLFDHV 340 >gi|317128446|ref|YP_004094728.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Bacillus cellulosilyticus DSM 2522] gi|315473394|gb|ADU29997.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Bacillus cellulosilyticus DSM 2522] Length = 331 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 93/308 (30%), Positives = 141/308 (45%), Gaps = 9/308 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 L Y ML R +E+ L G + F C GQEA VG M+L + D ++ YR+ Sbjct: 17 LLMYETMLEARMIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAMALNKNKDYVLPYYRD 75 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNGFYGGHGIVGAQVSLGT 168 G +L G+ A + L+G GG H KN G V QV Sbjct: 76 MGVVLTFGMTAKDLF--LSGFAKAEDPNSGGRQMPGHFGQRKNRIVTGSSPVTTQVPHAV 133 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G A K + D + FG+G++NQG +E N A++ +L VI++ ENN+YA+ + Sbjct: 134 GFGLAAKMKNEDFVAFTTFGEGSSNQGDFHEGINFASVHDLPVIFMCENNKYAISVPQEK 193 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 N S R + + I G VDG D AV + KA KGP +IE ++YR HS Sbjct: 194 QLRCENVSDRAIGYGIHGETVDGNDPLAVYEAISKARQRAADGKGPSLIETISYRLTPHS 253 Query: 289 M-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 D + YR + E++E + D I L ++ E++ ++K I+ + E+A Sbjct: 254 SDDDDSTYRDKAEVDEAKK-RDAIVTFSMYLKDTGVLTDSQETEMKNKLKKRIDEATEYA 312 Query: 348 QSDKEPDP 355 + + P Sbjct: 313 EKAEYAKP 320 >gi|66773104|ref|NP_001019590.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial [Danio rerio] gi|66267581|gb|AAH95157.1| Branched chain keto acid dehydrogenase E1, alpha polypeptide [Danio rerio] gi|94733274|emb|CAK04295.1| novel protein similar to vertebrate branched chain keto acid dehydrogenase E1, alpha polypeptide (maple syrup urine disease) (BCKDHA) [Danio rerio] gi|182891520|gb|AAI64675.1| Bckdha protein [Danio rerio] Length = 446 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 82/321 (25%), Positives = 146/321 (45%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E + +KE L+ Y+ M L+ + + G + F G+E +G +L Sbjct: 94 EDPQLSKETVLNFYQKMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHIGSAAALDPS 152 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ G MA+ + KG+ +H S F + Sbjct: 153 DLVFGQYREAGVLMYRGFPLDLFMAQCYANADDLGKGRQMPVHYGSKDLNFVTISSPLAT 212 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN +A +I+ NN YA+ Sbjct: 213 QIPQAAGAAYAVKRENANRVVICYFGEGAASEGDAHAGFNFSATLECPLIFFCRNNGYAI 272 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T + + RG + + ++VDG D+ AV +A A P +IE +TY Sbjct: 273 STPTNEQYRGDGIAARGPGYGLMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 332 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R + W E + + RK++ Sbjct: 333 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYMTARDWWGEDEERAWRKQSRKLVM 392 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P +++D+ Sbjct: 393 EAFERAERRLKPNPDLMFTDV 413 >gi|294630389|ref|ZP_06708949.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptomyces sp. e14] gi|292833722|gb|EFF92071.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptomyces sp. e14] Length = 382 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/308 (25%), Positives = 145/308 (47%), Gaps = 12/308 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y ++L RR+ +A L G + + GQEA V ++L + D + +YR+ Sbjct: 57 YGQLVLGRRYNTQATALTKQGRLAVYPS-STGQEACEVAAALALEDRDWLFPSYRDTLAA 115 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A GVD + + L +G G H + + + Q+ G+A A + Sbjct: 116 VARGVDPVQALTLL---RGDWHTGYDPYEHRVAPLST------PLATQLPHAVGLAHAAR 166 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + D + + GDG ++G +E+ N AA+W V+++++NN +A+ +++ +A + Sbjct: 167 LKGDDVVALAMVGDGGTSEGDFHEALNFAAVWQAPVVFLVQNNGFAISVPLAKQTAAPSL 226 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 + + V + +PG VDG D AV + AV + RA GP +IE +TYR H+ +D A Sbjct: 227 AHKAVGYGMPGRLVDGNDAAAVHEVLTDAVRHARAGGGPTLIEAVTYRIDAHTNADDATR 286 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR E+ R+ HDP+ + + L E + + + + E D D Sbjct: 287 YRGDAEVETWRA-HDPVRLLERELTGRGLLDEDAVAAVREDAEAMAARLRERMNQDPALD 345 Query: 355 PAELYSDI 362 P +L++ + Sbjct: 346 PMDLFAHV 353 >gi|297811017|ref|XP_002873392.1| hypothetical protein ARALYDRAFT_350155 [Arabidopsis lyrata subsp. lyrata] gi|297319229|gb|EFH49651.1| hypothetical protein ARALYDRAFT_350155 [Arabidopsis lyrata subsp. lyrata] Length = 472 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/284 (26%), Positives = 135/284 (47%), Gaps = 1/284 (0%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 F IG+EA+ + +LT D + YRE G +L G + + G + KG Sbjct: 157 SFYATAIGEEAINIASAAALTPQDVIFPQYREPGVLLWRGFTLQEFANQCFGNKSDYGKG 216 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + +H S K ++ + Q+ G A++ K R D V FGDG ++G + Sbjct: 217 RQMPVHYGSNKLNYFTVSATIATQLPNAVGAAYSLKMDRKDACAVTYFGDGGTSEGDFHA 276 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 + N AA+ VI++ NN +A+ T S +G ++ I ++VDG D A+ + Sbjct: 277 ALNFAAVMEAPVIFICRNNGWAISTPTSDQFRSDGVVVKGRAYGIRSIRVDGNDALAMYS 336 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 + A + + PI+IE LTYR HS SD + YR+ +EI +P+ + R + Sbjct: 337 AVHTARGMAISEQRPILIEALTYRVGHHSTSDDSTRYRSADEIEWWNKARNPLSRFRTWI 396 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 N W S+ ++ ++K + ++ A+ ++P+ ++SD+ Sbjct: 397 ESNGWWSDEAESDLRSRIKKEMLEALRVAEKTEKPNLKNMFSDV 440 >gi|325183494|emb|CCA17954.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 801 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 5/287 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 143 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 201 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 202 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 261 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 262 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 321 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 322 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 381 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN 335 + YR E++ + DPI +V++ L+ + W SE L+E E N Sbjct: 382 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERN 428 >gi|226312885|ref|YP_002772779.1| pyruvate dehydrogenase E1 component alpha subunit [Brevibacillus brevis NBRC 100599] gi|226095833|dbj|BAH44275.1| pyruvate dehydrogenase E1 component alpha subunit [Brevibacillus brevis NBRC 100599] Length = 361 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 150/299 (50%), Gaps = 15/299 (5%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ R ++++A L G +G + + GQEA ++G + +L++ D ++ +YR+ ++ Sbjct: 44 RKMVFTRVWDQRAISLNRQGRLGFYAPVA-GQEASMIGSEAALSKEDFVLPSYRDIPQMV 102 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G K G G +G ++ M I+ AQ + TG+A K Sbjct: 103 WHGYPMHKAFLYSRGHIEGGKIPEGVNVLMPQI---------IIAAQCTQATGVAMGYKL 153 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R K+ + FGDGA +QG YE N A ++ L VI+ +NN YA+ + +A N + Sbjct: 154 RGEKKVAINYFGDGATSQGDFYEGMNFAGVYKLPVIFFSQNNGYAISLPFEKQTASENIA 213 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPAN 294 + V+ I +VDGMDI AV + +A +G +IE +TYRY H+M+ DP Sbjct: 214 VKAVAAGIASERVDGMDILAVYYAVQQAKERGVNGEGATLIEAMTYRYGPHTMAGDDPTR 273 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRT EE +E DP+ + RK L SE D + + + + ++++ ++D+ P Sbjct: 274 YRTGEEQSEWEL-RDPLIRFRKFLEAKGLWSEKDEEAVIEEAKAAVADAIK--KADETP 329 >gi|325183482|emb|CCA17942.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 799 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 5/287 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 143 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 201 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 202 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 261 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 262 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 321 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 322 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 381 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN 335 + YR E++ + DPI +V++ L+ + W SE L+E E N Sbjct: 382 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERN 428 >gi|315646349|ref|ZP_07899468.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Paenibacillus vortex V453] gi|315278267|gb|EFU41584.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Paenibacillus vortex V453] Length = 346 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 128/256 (50%), Gaps = 5/256 (1%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAY 109 Q L Y+ M+L R+F+E+ L G + F IGQEA V +L E D + Y Sbjct: 23 QVLDMYKYMVLARKFDERNLLLQRAGKIN-FHVSGIGQEACQVAAAFALDREKDYFLPYY 81 Query: 110 REHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 R++G ++A G+ ++M + + S G+ H S + G V QV Sbjct: 82 RDYGFVMAVGMTPRELMLSAFAKAEDPNSGGRQMPGHFGSKRLRIVTGSSPVTTQVPHAV 141 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 GIA A K ++ D + V FG+G++NQG +E N A + L VI + ENNQYA+ + + Sbjct: 142 GIALAAKMQKKDFVSFVTFGEGSSNQGDFHEGCNFAGVHKLPVIIMCENNQYAISVPLHK 201 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 S R + + PG++VDG D V A + +A +GP +IE + YR HS Sbjct: 202 -QISGKVSDRALGYGFPGIRVDGNDALEVYAAVKEARERAIRGEGPTLIESMMYRLSPHS 260 Query: 289 MSD-PANYRTREEINE 303 SD YRT+EE+ E Sbjct: 261 TSDNDLAYRTKEEVEE 276 >gi|283470796|emb|CAQ50007.1| 2-oxoisovalerate dehydrogenase subunit alpha (branched-chain alpha-keto acid dehydrogenase e1 component alpha chain) (bckdhe1-alpha) [Staphylococcus aureus subsp. aureus ST398] Length = 330 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 134/306 (43%), Gaps = 3/306 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM +L EGD YR+ + Sbjct: 18 YKWMDLGRKIDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYALEEGDITAPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ A G++ + S GK H S V Q+ G A A Sbjct: 77 TYMGISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRSKNILSQSSPVATQIPHAVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K KI G+G++NQG +E N A + L + VI NN+YA+ S A Sbjct: 137 KMDGKKKIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + I G QVDG D A+ M +A + +G +IE +T R HS D Sbjct: 197 LSDRALGYGIHGEQVDGNDPLAMYKAMKEARERAISGQGSTLIEAVTSRMTAHSSDDDDQ 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE E D E+ +K LL + L EIE + IIN + + A+ P Sbjct: 257 YRTKEE-REALKKADCNEKFKKELLSAGIIDDAWLAEIEAEHKDIINKATKAAEDAPYPS 315 Query: 355 PAELYS 360 E Y+ Sbjct: 316 VEEAYA 321 >gi|325183490|emb|CCA17950.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 801 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 5/287 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 143 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 201 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 202 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 261 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 262 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 321 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 322 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 381 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN 335 + YR E++ + DPI +V++ L+ + W SE L+E E N Sbjct: 382 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERN 428 >gi|323443189|gb|EGB00807.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus O46] Length = 330 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 134/306 (43%), Gaps = 3/306 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM +L EGD YR+ + Sbjct: 18 YKWMDLGRKIDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYALEEGDITAPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ A G++ + S GK H S V Q+ G A A Sbjct: 77 TYMGISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSSPVATQIPHAVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K KI G+G++NQG +E N A + L + VI NN+YA+ S A Sbjct: 137 KMDGKKKIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVILNNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + I G QVDG D A+ M +A + +G +IE +T R HS D Sbjct: 197 LSDRALGYGIHGEQVDGNDPLAMYKAMKEARERAISGQGSTLIEAVTSRMTAHSSDDDDQ 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE E D E+ +K LL + L EIE + IIN + + A+ P Sbjct: 257 YRTKEE-REALKKADCNEKFKKELLSAGIIDDAWLAEIEAEHKDIINKATKAAEDAPYPS 315 Query: 355 PAELYS 360 E Y+ Sbjct: 316 VEEAYA 321 >gi|295134538|ref|YP_003585214.1| 2-oxoisovalerate dehydrogenase E1 component subunits alpha and beta [Zunongwangia profunda SM-A87] gi|294982553|gb|ADF53018.1| 2-oxoisovalerate dehydrogenase E1 component subunits alpha and beta [Zunongwangia profunda SM-A87] Length = 665 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/326 (25%), Positives = 156/326 (47%), Gaps = 13/326 (3%) Query: 34 VDIPFLEGFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVI 92 +D P E F SE +++E + Y+ +L R EEK L G + + IGQEA+ Sbjct: 1 MDHPSTEMFFASEAYSQEFLIDLYKKLLKPRLVEEKMLILLRQGKISKWF-AGIGQEAIS 59 Query: 93 VGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG 152 VG+ +L E + ++ +R G + ++ ++ G+ G +KG+ S H + + Sbjct: 60 VGLTAALQEEEYILPMHRNLGVFTTRNIPLHRLFSQWQGKMNGFTKGRDRSFHFGTQEYK 119 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 G +G Q+ + GIA A+K R ++ V G+G ++G +E+ NIA++W L V+ Sbjct: 120 IIGMISHLGPQLGVADGIALAHKLRNEKRLTAVFTGEGGTSEGDFHEALNIASVWALPVL 179 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 + IENN Y + T + + + R + + +DG ++ V + + + R + Sbjct: 180 FCIENNGYGLSTPTNEQYHCEHLADRAKGYGMESHIIDGNNLLEVYSKISDIASDIRENP 239 Query: 273 GPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL-----LHNKWASEG 327 P++IE T+R RGH + Y + + DP+ + + L L+N+WA+ Sbjct: 240 RPVLIEFKTFRMRGHEEASGTAY-VPDSLLAHWGEKDPVLRYEQHLLEHGILNNEWAA-- 296 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +++ I + A +D P Sbjct: 297 ---HMKWEIKQEIEEHLSIAANDNPP 319 >gi|330806256|ref|XP_003291088.1| 3-methyl-2-oxobutanoate dehydrogenase [Dictyostelium purpureum] gi|325078768|gb|EGC32402.1| 3-methyl-2-oxobutanoate dehydrogenase [Dictyostelium purpureum] Length = 450 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 84/318 (26%), Positives = 149/318 (46%), Gaps = 3/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F+KE+ + Y M+ + + + G + F G+EA+ VG +L D + Sbjct: 93 FSKEEVVKMYSTMVTLSVMDSVLYDVQRQGRIS-FYMTSFGEEAIHVGSAAALEMSDTIF 151 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YRE G + G + I+ + + + KG+ MH S K + Q+ Sbjct: 152 AQYRETGVFMWRGFTIADIINQCCTNEHDLGKGRQMPMHFGSKKINLQTISSPLTTQLPQ 211 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G ++A K +V FG+GAA++G + + N A+ + I+ NN++A+ T Sbjct: 212 AVGSSYAQKLAGEKSCTIVYFGEGAASEGDFHAAMNFASALSTPTIFFCRNNKWAISTPS 271 Query: 227 SRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + RG + + + ++VDG DI AV A + P++IE +TYR Sbjct: 272 KEQYKGDGIAGRGPNGYGMKTIRVDGNDIWAVYNATKLARKITVEEQRPVLIEAMTYRVG 331 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HS SD ++ YRT EEIN + +PI ++R + W S+ KE+ R+ + +S+ Sbjct: 332 HHSTSDDSSRYRTVEEINHWKEGKNPITRLRNYMDRKGWWSDAQEKELITEARQTVRDSL 391 Query: 345 EFAQSDKEPDPAELYSDI 362 A+ +P +E+++D+ Sbjct: 392 VVAEKQFKPSISEIFTDV 409 >gi|325183486|emb|CCA17946.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 702 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 5/287 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 44 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 102 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 103 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 162 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 163 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 222 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 223 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 282 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN 335 + YR E++ + DPI +V++ L+ + W SE L+E E N Sbjct: 283 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERN 329 >gi|325183487|emb|CCA17947.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 700 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 5/287 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 44 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 102 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 103 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 162 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 163 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 222 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 223 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 282 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN 335 + YR E++ + DPI +V++ L+ + W SE L+E E N Sbjct: 283 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERN 329 >gi|50550225|ref|XP_502585.1| YALI0D08690p [Yarrowia lipolytica] gi|49648453|emb|CAG80773.1| YALI0D08690p [Yarrowia lipolytica] Length = 463 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/282 (29%), Positives = 134/282 (47%), Gaps = 1/282 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + VG +L D + + YRE G + G M +L G + KG+ Sbjct: 140 FYMVSAGEEGMAVGSAAALKPQDHVYSQYREQGAYMYRGFTLDDFMNQLYGNKHDQGKGR 199 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + + + Q+ G A+A K D + + G+GAA++G + + Sbjct: 200 NMPVHYGSRELNMHTISSPLATQLPHAAGTAYAQKMAGVDGVTLCYMGEGAASEGDFHAA 259 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 NIAA N VIY NN YA+ TS + R + + I ++VDG DI AV Sbjct: 260 LNIAATRNCPVIYFCRNNGYAISTSAIEQYKGDGIASRAIGYGIETIRVDGNDIFAVHRA 319 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLL 319 KA + P++IE ++YR HS SD + YR+R E+ + +PI ++RK L Sbjct: 320 TKKAREIALRDQKPVLIEGMSYRVSHHSTSDDSFAYRSRGEVESWQRKDNPIVRLRKWLE 379 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 NK +E + ++ RK I + A+ K+P+ ++D Sbjct: 380 LNKHWNEEEEQKFRTQARKDILTAFSKAEKVKKPEIVSAFTD 421 >gi|325183496|emb|CCA17956.1| 2oxoisovalerate dehydrogenase alpha subunit putative [Albugo laibachii Nc14] Length = 702 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 5/287 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + +YR M+ ++ + G + F C G+EAV G +L D + YRE Sbjct: 44 VQSYRKMICMKTMDSILYDAQRQGRIS-FYMTCYGEEAVSFGTAAALNTSDVVFAQYREP 102 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G + G G KG+ +H S ++ + Q+ G A+ Sbjct: 103 GVLMWRGFHYQDFADQCFGNNDGHGKGRQMPVHYGSKPLSYHTISSPLATQIPHAVGAAY 162 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K R D+I V G+GAA++G + N AA + V++V+ NN YA+ T S Sbjct: 163 ALKLSREDRIAVCYLGEGAASEGDFHAGLNAAATRDCPVLFVVRNNGYAISTPRSDQYRG 222 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG+ + I +VDG D+ AV T +A + + P+++E++ YR HS SD Sbjct: 223 DGIATRGIGYGIAFARVDGNDLLAVYETTTRARKFILENNKPMMLELMCYRTGHHSTSDD 282 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LKEIEMN 335 + YR E++ + DPI +V++ L+ + W SE L+E E N Sbjct: 283 STRYRPDIEMSSSKECFDPILRVKRYLIKHGWWSEAQDSILQETERN 329 >gi|258423171|ref|ZP_05686064.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus A9635] gi|257846621|gb|EEV70642.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus A9635] Length = 330 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 134/306 (43%), Gaps = 3/306 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM +L EGD YR+ + Sbjct: 18 YKWMDLGRKIDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYALEEGDITAPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ A G++ + S GK H S V Q+ G A A Sbjct: 77 TYMGISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSSPVATQIPHAVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K KI G+G++NQG +E N A + L + VI NN+YA+ S A Sbjct: 137 KMDGKKKIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + I G QVDG D A+ M +A + +G +IE +T R HS D Sbjct: 197 LSDRALGYGIHGEQVDGNDPLAMYKAMKEARERAISGQGSTLIEAVTSRMTAHSSDDDDQ 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE E D E+ +K LL + L EIE + IIN + + A+ P Sbjct: 257 YRTKEE-REALKKADCNEKFKKELLSAGIIDDAWLTEIEAEHKDIINKATKAAEDAPYPS 315 Query: 355 PAELYS 360 E Y+ Sbjct: 316 VEEAYA 321 >gi|126329384|ref|XP_001372218.1| PREDICTED: similar to 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial precursor (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) [Monodelphis domestica] Length = 439 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 90/321 (28%), Positives = 145/321 (45%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E + ++EQ L YR M L+ + + G + F G+E VG +L + Sbjct: 87 EDPQLSQEQVLKLYRSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDDT 145 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ G M++ G KG+ +H + F + Sbjct: 146 DLVFGQYREAGVLMYRGYPLDLFMSQCYGNSSDPGKGRQMPVHYGCKERNFVTISSPLAT 205 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K +++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 206 QIPQAVGAAYAAKRANANQAVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 265 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 266 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATREARRRAVAENQPFLIEAMTY 325 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R +L W E K RK + Sbjct: 326 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYMLSRGWWDEEQEKAWRKQSRKKVM 385 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P P+ L+SD+ Sbjct: 386 EAFEEAERKLKPRPSLLFSDV 406 >gi|12964598|dbj|BAB32665.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Gallus gallus] Length = 432 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/321 (26%), Positives = 142/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E + KE L Y+ M L+ + + G + F G+E VG +L + Sbjct: 80 EDPQLPKELVLKLYKTMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDDT 138 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ G MA+ G +G+ +H + F + Sbjct: 139 DLVFGQYREAGVLMYRGYPLDLFMAQCYGNASDPGRGRQMPVHYGCRERHFVTISSPLAT 198 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K + + + FG+GAA++G + FN AA +++ NN YA+ Sbjct: 199 QIPQAVGAAYAIKRADASRAVICYFGEGAASEGDAHAGFNFAATLECPIVFFCRNNGYAI 258 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + + ++VDG D+ AV +A A P +IE +TY Sbjct: 259 STPTSEQYRGDGIAARGPGYGLMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 318 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R + W E K + RK + Sbjct: 319 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYMQGRGWWDEEQEKGWRKSSRKKVM 378 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 379 EAFEQAERKPKPNPQHLFSDV 399 >gi|311692952|gb|ADP95825.1| chain A, alpha-keto acid dehydrogenase-like protein [marine bacterium HP15] Length = 409 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 7/274 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R MLL R F+E+ +++ G F G+EA+ ++L++GD YR ++ Sbjct: 82 RSMLLTRVFDERLFRVHRQGKTS-FYMKSTGEEAIGAAQSLALSQGDMCFPTYRVMSWLM 140 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANK 175 A ++ ++ + KG+ + +FS ++ GFY G VG++ G A A+ Sbjct: 141 ARDYPLIDMVNQIFSNEKDPLKGRQLPI-LFSARDYGFYSLSGNVGSRFGHAVGWAMASA 199 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TN 234 Y+ DKI + G+G +G +E+ A+++ VI + NNQ+A+ + A A+ T Sbjct: 200 YKGDDKIALGYIGEGTTAEGDFHEALTFASVYRAPVILCVTNNQWAISSYSGIAGAEATT 259 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 F+ + +++ +PG++VDG D AV + A R + G +IE TYR GHS S DP Sbjct: 260 FAAKALAYGLPGLRVDGNDFLAVWSATKWAAERARNNLGATLIEFFTYRAAGHSTSDDPT 319 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLH-NKWASE 326 YR +E E DP+E+++ L+ +W E Sbjct: 320 KYRPADEA-EHWPLGDPLERLKHHLISLGEWDDE 352 >gi|308178632|ref|YP_003918038.1| 2-oxoacid dehydrogenase E1 component subunit alpha [Arthrobacter arilaitensis Re117] gi|307746095|emb|CBT77067.1| 2-oxoacid dehydrogenase E1 component alpha chain [Arthrobacter arilaitensis Re117] Length = 380 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 23/318 (7%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M L RRF+++A L G + + L GQEA +G + D + YREHG Sbjct: 45 YRDMALTRRFDQEATALQRQGQLCLWVPLR-GQEAAQIGSGRATRPSDYIFPTYREHGVA 103 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA-- 173 L V S+++ G GG + + HM++ ++ AQ+ G A Sbjct: 104 LTRDVSFSEMLRLFRGISGGGWDPRENNFHMYTM---------VLAAQMPHAAGYGMALN 154 Query: 174 ------NKYRRSDK--ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 ++ RR+ + V FGDG++ +G+ +ES A+ +N V+Y +NNQ+A+ Sbjct: 155 MEQRGWDEARRAKEGNAVVAYFGDGSSTEGETHESMVFASSFNAPVVYFCQNNQWAISVP 214 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 ++ KR + +PG++VDG D+ AV A A+ + R+ KGP++IE +TYR Sbjct: 215 FE-VQSKVPLVKRAAGYGMPGIRVDGNDVLAVLAVTRWALEHARSGKGPVLIEAVTYRLG 273 Query: 286 GHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 H+ + DP YR EE + + DP+ ++ L N + +++ + + Sbjct: 274 AHTTADDPTKYRMSEEEAQW-APKDPLIRLETYLRENNLVDDAFFEQLSADANAMAAKVR 332 Query: 345 EFAQSDKEPDPAELYSDI 362 E A + P A+ + + Sbjct: 333 EDAMAFPVPPLAKSFEQV 350 >gi|253732171|ref|ZP_04866336.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724126|gb|EES92855.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 330 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 134/306 (43%), Gaps = 3/306 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM +L EGD YR+ + Sbjct: 18 YKWMDLGRKTDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYALEEGDITAPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ A G++ + S GK H S V Q+ G A A Sbjct: 77 TYMGISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSSPVATQIPHAVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K KI G+G++NQG +E N A + L + VI NN+YA+ S A Sbjct: 137 KMDDKKKIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + I G QVDG D A+ M +A + +G +IE +T R HS D Sbjct: 197 LSDRALGYGIHGEQVDGNDPLAMYKAMKEARDRAISGQGSTLIEAVTSRMTAHSSDDDDQ 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE E D E+ +K LL + L EIE + IIN + + A+ P Sbjct: 257 YRTKEE-REALKKADCNEKFKKELLSAGIIDDAWLAEIEAEHKDIINKATKAAEDAPYPS 315 Query: 355 PAELYS 360 E Y+ Sbjct: 316 VEEAYA 321 >gi|57650474|ref|YP_186403.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus COL] gi|87162134|ref|YP_494162.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195324|ref|YP_500128.1| 2-oxoisovalerate dehydrogenase, E1 component subunit alpha [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221635|ref|YP_001332457.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|161509746|ref|YP_001575405.1| pyruvate dehydrogenase (acetyl-transferring) alpha subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140062|ref|ZP_03564555.1| pyruvate dehydrogenase (acetyl-transferring) alpha subunit [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258451175|ref|ZP_05699210.1| 2-oxoisovalerate dehydrogenase, alpha subunit [Staphylococcus aureus A5948] gi|262049103|ref|ZP_06021980.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus D30] gi|262051184|ref|ZP_06023408.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus 930918-3] gi|282924766|ref|ZP_06332433.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus A9765] gi|294848548|ref|ZP_06789294.1| 2-oxoisovalerate dehydrogenase E1 component [Staphylococcus aureus A9754] gi|304380894|ref|ZP_07363554.1| 3-methyl-2-oxobutanoate dehydrogenase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|57284660|gb|AAW36754.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus COL] gi|87128108|gb|ABD22622.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202882|gb|ABD30692.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374435|dbj|BAF67695.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|160368555|gb|ABX29526.1| pyruvate dehydrogenase (acetyl-transferring) alpha subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257861230|gb|EEV84043.1| 2-oxoisovalerate dehydrogenase, alpha subunit [Staphylococcus aureus A5948] gi|259160821|gb|EEW45841.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus 930918-3] gi|259162772|gb|EEW47337.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus D30] gi|269941008|emb|CBI49392.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus TW20] gi|282592773|gb|EFB97779.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus A9765] gi|294824574|gb|EFG40997.1| 2-oxoisovalerate dehydrogenase E1 component [Staphylococcus aureus A9754] gi|302751349|gb|ADL65526.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340621|gb|EFM06555.1| 3-methyl-2-oxobutanoate dehydrogenase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198788|gb|EFU29116.1| pyruvate dehydrogenase (acetyl-transferring) alpha subunit [Staphylococcus aureus subsp. aureus CGS01] gi|320140597|gb|EFW32451.1| dehydrogenase E1 component [Staphylococcus aureus subsp. aureus MRSA131] gi|320144134|gb|EFW35903.1| dehydrogenase E1 component [Staphylococcus aureus subsp. aureus MRSA177] gi|329725292|gb|EGG61779.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus aureus subsp. aureus 21189] Length = 330 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 134/306 (43%), Gaps = 3/306 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM +L EGD YR+ + Sbjct: 18 YKWMDLGRKIDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYALEEGDITAPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ A G++ + S GK H S V Q+ G A A Sbjct: 77 TYMGISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSSPVATQIPHAVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K KI G+G++NQG +E N A + L + VI NN+YA+ S A Sbjct: 137 KMDGKKKIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + I G QVDG D A+ M +A + +G +IE +T R HS D Sbjct: 197 LSDRALGYGIHGEQVDGNDPLAMYKAMKEARDRAISGQGSTLIEAVTSRMTAHSSDDDDQ 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE E D E+ +K LL + L EIE + IIN + + A+ P Sbjct: 257 YRTKEE-RETLKKADCNEKFKKELLSAGIIDDAWLAEIEAEHKDIINKATKAAEDAPYPS 315 Query: 355 PAELYS 360 E Y+ Sbjct: 316 VEEAYA 321 >gi|330752234|emb|CBL87191.1| 2-oxoisovalerate dehydrogenase E1 component alpha and beta subunit [uncultured Sphingobacteria bacterium] gi|330752265|emb|CBL87221.1| 2-oxoisovalerate dehydrogenase E1 component subunits alpha and beta [uncultured Sphingobacteria bacterium] Length = 669 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 78/278 (28%), Positives = 134/278 (48%), Gaps = 2/278 (0%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 ++ E +K + Y ML R EEK L G + + IGQEA+ VG+ +L Sbjct: 14 YKKGEVSKAEMKKLYLSMLYPRLIEEKMLILLRQGKISKWFS-GIGQEAISVGVTSALDA 72 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 + + +R G + ++ ++ G+ G +KG+ S H + + G +G Sbjct: 73 DEIIFPMHRNLGVFTTREIPLKRLFSQWQGKANGFTKGRDRSFHFGTLEYSIVGMISHLG 132 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+SL G+A +K + KI V G+G ++G+ +E+ N+AA+W L VI++IENN Y Sbjct: 133 PQLSLSAGVALGHKLAKEKKISVAFTGEGGTSEGEFHEALNVAAVWKLPVIFIIENNGYG 192 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T A N + RG+ + + +DG +I V T+ + + P +IE T Sbjct: 193 LSTETKEQYACENLADRGLGYGMKSKVIDGNNILEVYQTIVQIKKEITKNPEPWLIECKT 252 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 +R RGH + Y ++ + E + DPI + L+ Sbjct: 253 FRMRGHEEASGTKYVPKKLL-EQWAKKDPIANFEQYLV 289 >gi|313803034|gb|EFS44242.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL110PA2] Length = 351 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 89/273 (32%), Positives = 136/273 (49%), Gaps = 21/273 (7%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + A +M++ RRF+ +A L G +G + L +GQEA G ++L EGDQ+ YRE Sbjct: 27 VKALEMMVMTRRFDVEATALQRHGELGLWPPL-LGQEATQAGAWLALREGDQVFPTYREQ 85 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G A GV +A++ G G S ++ + G G + A + + Sbjct: 86 GLAHAMGVS----LADILGAWDGTSHCGWDTVATHFSAYPVMIGSGTLHA-------VGY 134 Query: 173 ANKYRRS-----DKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 A +R D V+ F GDGA ++G E++ AA N V+++ NNQ+A+ Sbjct: 135 AMGVQRDVEAGGDPAAVLDFHGDGAMSEGDTNEAYVFAASMNAPVVFLCVNNQWAISEPT 194 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + S + F +R F IP +QVDG D+ A+ A + A+ Y R+ KGP+ +E TYR Sbjct: 195 TVQSPTSLF-RRATGFGIPAVQVDGNDVIAMMAVLRSALEYARSGKGPVFVEAWTYRMGA 253 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ + DP YRT EE DPI ++R L Sbjct: 254 HTTTDDPTRYRTAEE-ESTWGKTDPIVRLRTYL 285 >gi|282916788|ref|ZP_06324546.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus D139] gi|283770594|ref|ZP_06343486.1| 2-oxoisovalerate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus H19] gi|282319275|gb|EFB49627.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus D139] gi|283460741|gb|EFC07831.1| 2-oxoisovalerate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus H19] gi|298694800|gb|ADI98022.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus ED133] gi|302333194|gb|ADL23387.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus aureus subsp. aureus JKD6159] gi|323440415|gb|EGA98127.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus O11] Length = 330 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 134/306 (43%), Gaps = 3/306 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM +L EGD YR+ + Sbjct: 18 YKWMDLGRKIDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYALEEGDITAPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ A G++ + S GK H S V Q+ G A A Sbjct: 77 TYMGISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSSPVATQIPHAVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K KI G+G++NQG +E N A + L + VI NN+YA+ S A Sbjct: 137 KMDGKKKIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + I G QVDG D A+ M +A + +G +IE +T R HS D Sbjct: 197 LSDRALGYGIHGEQVDGNDPLAMYKAMKEARERAISGQGSTLIEAVTSRMTAHSSDDDDQ 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE E D E+ +K LL + L EIE + IIN + + A+ P Sbjct: 257 YRTKEE-REALKKADCNEKFKKELLSAGIIDDAWLAEIEAEHKDIINKATKAAEDAPYPS 315 Query: 355 PAELYS 360 E Y+ Sbjct: 316 VEEAYA 321 >gi|315640756|ref|ZP_07895858.1| pyruvate dehydrogenase complex E1 component alpha subunit [Enterococcus italicus DSM 15952] gi|315483511|gb|EFU74005.1| pyruvate dehydrogenase complex E1 component alpha subunit [Enterococcus italicus DSM 15952] Length = 399 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 88/313 (28%), Positives = 144/313 (46%), Gaps = 17/313 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + E+ + M+ R E++ L G +G F GQEA + + + D Sbjct: 69 VPDLSDEELVELMTQMVWSRVLNERSTALNRQGRLGFFAPTA-GQEASQLASHFAFEKED 127 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + G G + + + I+GAQ Sbjct: 128 VLLPGYRDVPQLIRHGLPLKEAFLWSRGHVAG---------NFYPEELKALPPQIIIGAQ 178 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K R + GDG ++QG YE+ N A + N ++ I+NN +A+ Sbjct: 179 YVQAAGVALGLKKRNKKNVVFTYTGDGGSSQGDFYEAINFAGAYKANGVFYIQNNGFAIS 238 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + SA +++ V+ IPG+QVDGMD AV A + A GP++IE LTYR Sbjct: 239 TPREQQSAAATLAQKAVAAGIPGIQVDGMDPLAVYTVSKLAREWSIAGNGPVLIETLTYR 298 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDLKEIEMNVRKII 340 Y H++S DP YR+++ +E DP+ + RK L W+ E + + IE +I Sbjct: 299 YGPHTLSGDDPTRYRSKDMDDEWL-QKDPLIRFRKYLEAKGLWSEEKEEQVIEQTKEEI- 356 Query: 341 NNSVEFAQSDKEP 353 A++DK P Sbjct: 357 --KAAIAEADKVP 367 >gi|332025890|gb|EGI66046.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial [Acromyrmex echinatior] Length = 392 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 91/298 (30%), Positives = 150/298 (50%), Gaps = 12/298 (4%) Query: 72 LYGMGMVG--GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAEL 129 +YG+ G F G+EAV +G +LT D + YRE G +L G +K M + Sbjct: 65 MYGLHRQGRISFYMTNTGEEAVQIGSAAALTLKDTIYAQYREAGVLLHRGQPLAKFMNQC 124 Query: 130 TGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC-FG 188 G KG+ +H S + F + Q+ G A+A K + D CVVC FG Sbjct: 125 YGNCEDDGKGRQMPIHYGSKELNFVTISSPLTTQLPQAVGAAYAFKLDKKDA-CVVCYFG 183 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ 248 +GA ++G + +FN AA + V+++ NN YA+ T V + +G ++ I ++ Sbjct: 184 EGATSEGDAHAAFNFAATLSCPVVFLCRNNGYAISTPVLEQLKGDGIAAKGPAYGINTIR 243 Query: 249 VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSN 307 VDG D+ A+ A +C K P++IE +TYR HS SD + YR+ +EI++ + Sbjct: 244 VDGNDVLAMYYATKSAREFCIKQKKPVLIEAMTYRIGHHSTSDDSTAYRSVDEISQWNT- 302 Query: 308 HDPIEQVRKRLLHNK---WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 H P+ VR RL W + + +E+ +++K I ++ E A+ +P L++D+ Sbjct: 303 HSPL--VRFRLYLESLGLWCQKRE-QELIDSIKKEIFHAFEEAERKSKPHWRNLFTDV 357 >gi|129032|sp|P11960|ODBA_RAT RecName: Full=2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial; AltName: Full=Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; Short=BCKDE1A; Short=BCKDH E1-alpha; Flags: Precursor gi|203121|gb|AAA40811.1| branched chain alpha-ketoacid dehydrogenase precursor [Rattus norvegicus] Length = 441 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 91/321 (28%), Positives = 145/321 (45%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L YR M L+ + + G + F G+E VG +L Sbjct: 89 EDPHLPQEEVLKLYRSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALERT 147 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G KG+ +H + F + Sbjct: 148 DLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDPGKGRQMPVHYGCKERHFVTISSPLAT 207 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K +++I + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 208 QIPQAVGAAYAAKRANANQIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 267 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 268 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 327 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R+ LL+ W E K RK + Sbjct: 328 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVM 387 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P+ L+SD+ Sbjct: 388 EAFEQAERKLKPNPSLLFSDV 408 >gi|315126681|ref|YP_004068684.1| 2-oxoisovalerate dehydrogenase alpha subunit (branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) (BCKDE1A) [Pseudoalteromonas sp. SM9913] gi|315015195|gb|ADT68533.1| 2-oxoisovalerate dehydrogenase alpha subunit (branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) (BCKDE1A) [Pseudoalteromonas sp. SM9913] Length = 404 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 89/329 (27%), Positives = 148/329 (44%), Gaps = 15/329 (4%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +K + Y M IR +E+ G V F C+G+EA + +L + D + Sbjct: 45 DISKHTAIKLYETMRFIRLLDERMQGAQRQGRVS-FYMQCLGEEAAVTASAAALEQDDMI 103 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + YRE + G + M ++ + + KG+ +H S + +G Q+ Sbjct: 104 MAQYREQAALHYRGFTLDQFMNQMFSNELDLGKGRQMPIHYGSKALNYMTISSPLGTQIP 163 Query: 166 LGTGIAFANKYRRSD-----------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 TG A+ K + D + + FG+GAA++G + N+AA+ VI+ Sbjct: 164 QATGYAYGQKVKHIDAKTGELASTIDNVTICYFGEGAASEGDFHAGLNMAAVHKAPVIFF 223 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 NN YA+ T + RGV + I ++VDG D AV A KA P Sbjct: 224 ARNNGYAISTPADEQFKGDGIASRGVGYGIKTIRVDGSDALAVYAATKKARKIAATQGEP 283 Query: 275 IIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 ++IE + YR HS S DP+ YR+++E E PIE+ RK L+ W + + + + Sbjct: 284 VLIESIAYRLGAHSTSDDPSGYRSKDE--EANYKTCPIERFRKWLVKQNWLDDAEDIKAK 341 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +R I +++ A+ +P EL SD+ Sbjct: 342 ETIRDDILAALKRAEVIDKPALEELISDV 370 >gi|3822223|gb|AAC69851.1| branched-chain alpha keto-acid dehydrogenase E1 alpha subunit [Arabidopsis thaliana] Length = 472 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/285 (25%), Positives = 137/285 (48%), Gaps = 2/285 (0%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 F +G+EA+ + +L+ D ++ YRE G +L G + + G + KG Sbjct: 156 SFYLTSVGEEAINIASAAALSPDDVVLPQYREPGVLLWRGFTLEEFANQCFGNKADYGKG 215 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + +H S + ++ + Q+ G+ ++ K + + V GDG ++G + Sbjct: 216 RQMPIHYGSNRLNYFTISSPIATQLPQAAGVGYSLKMDKKNACTVTFIGDGGTSEGDFHA 275 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVK 258 N AA+ V+++ NN +A+ T +S +G ++ IP V DG D AV Sbjct: 276 GLNFAAVMEAPVVFICRNNGWAISTHISEQFRSDGIVVKGQAYGIPKHPVWDGTDALAVY 335 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKR 317 + + A + P++IEM+TYR HS SD + YR +EI + + +P+ + RK Sbjct: 336 SAVRSAREMAVTEQRPVLIEMMTYRVGHHSTSDDSTKYRAADEIQYWKMSRNPVNRFRKW 395 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + N W SE D ++ N RK + +++ A+ ++ EL++D+ Sbjct: 396 VEDNGWWSEEDESKLRSNARKQLLQAIQAAEKWEKQPLTELFNDV 440 >gi|149056579|gb|EDM08010.1| branched chain ketoacid dehydrogenase E1, alpha polypeptide, isoform CRA_a [Rattus norvegicus] Length = 364 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 91/321 (28%), Positives = 145/321 (45%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L YR M L+ + + G + F G+E VG +L Sbjct: 12 EDPHLPQEEVLKLYRSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALERT 70 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G KG+ +H + F + Sbjct: 71 DLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDPGKGRQMPVHYGCKERHFVTISSPLAT 130 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K +++I + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 131 QIPQAVGAAYAAKRANANQIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 190 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 191 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 250 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R+ LL+ W E K RK + Sbjct: 251 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVM 310 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P+ L+SD+ Sbjct: 311 EAFEQAERKLKPNPSLLFSDV 331 >gi|15924507|ref|NP_372041.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus subsp. aureus Mu50] gi|15927098|ref|NP_374631.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus subsp. aureus N315] gi|21283199|ref|NP_646287.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus subsp. aureus MW2] gi|49486354|ref|YP_043575.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus MSSA476] gi|148268002|ref|YP_001246945.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Staphylococcus aureus subsp. aureus JH9] gi|150394069|ref|YP_001316744.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Staphylococcus aureus subsp. aureus JH1] gi|156979836|ref|YP_001442095.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus subsp. aureus Mu3] gi|253314887|ref|ZP_04838100.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253733233|ref|ZP_04867398.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus subsp. aureus TCH130] gi|255006304|ref|ZP_05144905.2| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793594|ref|ZP_05642573.1| branched-chain alpha-keto acid dehydrogenase subunit E1 [Staphylococcus aureus A9781] gi|258411106|ref|ZP_05681386.1| branched-chain alpha-keto acid dehydrogenase subunit E1 [Staphylococcus aureus A9763] gi|258420090|ref|ZP_05683045.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus A9719] gi|258437350|ref|ZP_05689334.1| branched-chain alpha-keto acid dehydrogenase E1 component [Staphylococcus aureus A9299] gi|258443556|ref|ZP_05691895.1| branched-chain alpha-keto acid dehydrogenase E1 component [Staphylococcus aureus A8115] gi|258446763|ref|ZP_05694917.1| branched-chain alpha-keto acid dehydrogenase E1 component [Staphylococcus aureus A6300] gi|258448677|ref|ZP_05696789.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus A6224] gi|258453494|ref|ZP_05701472.1| branched-chain alpha-keto acid dehydrogenase E1 component [Staphylococcus aureus A5937] gi|269203147|ref|YP_003282416.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus ED98] gi|282893019|ref|ZP_06301253.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus aureus A8117] gi|282928989|ref|ZP_06336576.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus A10102] gi|295406640|ref|ZP_06816445.1| 2-oxoisovalerate dehydrogenase E1 component [Staphylococcus aureus A8819] gi|296275126|ref|ZP_06857633.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus MR1] gi|297207763|ref|ZP_06924198.1| 3-methyl-2-oxobutanoate dehydrogenase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245777|ref|ZP_06929642.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus aureus A8796] gi|300911844|ref|ZP_07129287.1| 3-methyl-2-oxobutanoate dehydrogenase [Staphylococcus aureus subsp. aureus TCH70] gi|13701316|dbj|BAB42610.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus subsp. aureus N315] gi|14247288|dbj|BAB57679.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus subsp. aureus Mu50] gi|21204639|dbj|BAB95335.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus subsp. aureus MW2] gi|49244797|emb|CAG43241.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus MSSA476] gi|147741071|gb|ABQ49369.1| branched-chain alpha-keto acid dehydrogenase E1 component [Staphylococcus aureus subsp. aureus JH9] gi|149946521|gb|ABR52457.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Staphylococcus aureus subsp. aureus JH1] gi|156721971|dbj|BAF78388.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus subsp. aureus Mu3] gi|253728773|gb|EES97502.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus subsp. aureus TCH130] gi|257787566|gb|EEV25906.1| branched-chain alpha-keto acid dehydrogenase subunit E1 [Staphylococcus aureus A9781] gi|257840256|gb|EEV64720.1| branched-chain alpha-keto acid dehydrogenase subunit E1 [Staphylococcus aureus A9763] gi|257843801|gb|EEV68195.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus A9719] gi|257848555|gb|EEV72543.1| branched-chain alpha-keto acid dehydrogenase E1 component [Staphylococcus aureus A9299] gi|257850962|gb|EEV74905.1| branched-chain alpha-keto acid dehydrogenase E1 component [Staphylococcus aureus A8115] gi|257854338|gb|EEV77287.1| branched-chain alpha-keto acid dehydrogenase E1 component [Staphylococcus aureus A6300] gi|257857955|gb|EEV80844.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus A6224] gi|257864225|gb|EEV86975.1| branched-chain alpha-keto acid dehydrogenase E1 component [Staphylococcus aureus A5937] gi|262075437|gb|ACY11410.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus ED98] gi|282589396|gb|EFB94487.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus A10102] gi|282764337|gb|EFC04463.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus aureus A8117] gi|285817200|gb|ADC37687.1| Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus 04-02981] gi|294968387|gb|EFG44411.1| 2-oxoisovalerate dehydrogenase E1 component [Staphylococcus aureus A8819] gi|296887780|gb|EFH26678.1| 3-methyl-2-oxobutanoate dehydrogenase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177428|gb|EFH36680.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus aureus A8796] gi|300886090|gb|EFK81292.1| 3-methyl-2-oxobutanoate dehydrogenase [Staphylococcus aureus subsp. aureus TCH70] gi|312829907|emb|CBX34749.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129795|gb|EFT85785.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus aureus subsp. aureus CGS03] gi|329727685|gb|EGG64141.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus aureus subsp. aureus 21172] gi|329730852|gb|EGG67230.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus aureus subsp. aureus 21193] Length = 330 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 134/306 (43%), Gaps = 3/306 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM +L EGD YR+ + Sbjct: 18 YKWMDLGRKIDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYALEEGDITAPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ A G++ + S GK H S V Q+ G A A Sbjct: 77 TYMGISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSSPVATQIPHAVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K KI G+G++NQG +E N A + L + VI NN+YA+ S A Sbjct: 137 KMDGKKKIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + I G QVDG D A+ M +A + +G +IE +T R HS D Sbjct: 197 LSDRALGYGIHGEQVDGNDPLAMYKAMKEARDRAISGQGSTLIEAVTSRMTAHSSDDDDQ 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE E D E+ +K LL + L EIE + IIN + + A+ P Sbjct: 257 YRTKEE-REALKKADCNEKFKKELLSAGIIDDAWLAEIEAEHKDIINKATKAAEDAPYPS 315 Query: 355 PAELYS 360 E Y+ Sbjct: 316 VEEAYA 321 >gi|57209620|emb|CAI41290.1| pyruvate dehydrogenase (lipoamide) alpha 1 [Homo sapiens] Length = 204 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 85/173 (49%), Positives = 109/173 (63%), Gaps = 11/173 (6%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQ-------EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 C GQ EA VG++ + D +ITAYR HG G+ +I+AELTGR+GG + Sbjct: 94 CDGQFLLPLTQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCA 153 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDG 190 KGKGGSMHM++ KN FYGG+GIVGAQV LG GIA A KY D++C+ +GDG Sbjct: 154 KGKGGSMHMYA-KN-FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDG 204 >gi|83816643|ref|YP_446076.1| pyruvate dehydrogenase beta subunit [Salinibacter ruber DSM 13855] gi|83758037|gb|ABC46150.1| pyruvate dehydrogenase beta subunit [Salinibacter ruber DSM 13855] Length = 633 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/262 (27%), Positives = 133/262 (50%), Gaps = 4/262 (1%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 GQEAV G +L + D ++ +R G VD ++ +L G++G + G+ + H Sbjct: 18 GQEAVAAGTAWALDDRDYILPMHRNLGVWTTRDVDRERLFCQLMGKKGDFTNGRDRTFHF 77 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI-CVVCFGDGAANQGQVYESFNIAA 205 G + A + + G+ A ++R +D++ C C GDG +G +E+ N+A+ Sbjct: 78 GLPAKNLVGMISHMAAMLPVACGLGQAVRFREADRVACAFC-GDGGTREGDFHEALNLAS 136 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 +W+L V++++ENN Y + T A A + + +++PGM VDG D+ AV + +A Sbjct: 137 VWDLPVLFLVENNGYGLSTPTDEAVAPDDIADAAAGYDMPGMIVDGNDVFAVIEAVREAR 196 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 A+ R +GP+++EM T+R RGH + Y E I E + DP+++ R+ Sbjct: 197 AHART-EGPVLLEMKTFRVRGHEEASGTAYVPDELIEEWKEK-DPLDRFAARVREEGLLG 254 Query: 326 EGDLKEIEMNVRKIINNSVEFA 347 ++ I + ++ E+A Sbjct: 255 ADRMESIRAELESAVDELAEWA 276 >gi|77736548|ref|NP_036914.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial [Rattus norvegicus] gi|226530553|ref|NP_001141518.1| hypothetical protein LOC100273630 [Zea mays] gi|171846550|gb|AAI61819.1| Branched chain ketoacid dehydrogenase E1, alpha polypeptide [Rattus norvegicus] gi|194704904|gb|ACF86536.1| unknown [Zea mays] Length = 446 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 91/321 (28%), Positives = 145/321 (45%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L YR M L+ + + G + F G+E VG +L Sbjct: 94 EDPHLPQEEVLKLYRSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALERT 152 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G KG+ +H + F + Sbjct: 153 DLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDPGKGRQMPVHYGCKERHFVTISSPLAT 212 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K +++I + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 213 QIPQAVGAAYAAKRANANQIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 272 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 273 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 332 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R+ LL+ W E K RK + Sbjct: 333 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVM 392 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P+ L+SD+ Sbjct: 393 EAFEQAERKLKPNPSLLFSDV 413 >gi|239996453|ref|ZP_04716977.1| Alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Alteromonas macleodii ATCC 27126] Length = 314 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 85/292 (29%), Positives = 139/292 (47%), Gaps = 13/292 (4%) Query: 34 VDIPFLEGFEV----------SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCH 83 VDIP L+ + +KE+ L + M IR +E+ G + F Sbjct: 24 VDIPMLQILSAEGELIEKAVEPDLSKEEALKIFNTMHYIRVLDERMVGAQRQGRIS-FYL 82 Query: 84 LCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGS 143 G+EA V +L++ D +++ YRE G + G + M ++ + +KG+ Sbjct: 83 ASTGEEAASVASAAALSDDDMIMSQYREQGALAYRGYTTEQFMNQMFSNKDDPNKGRQMP 142 Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 +H F +G Q+ +G A+ K D + + FG+GAA++G + N+ Sbjct: 143 IHYGDKPLNFMTISSPLGTQIPQASGYAYGQKMSGKDVVTICYFGEGAASEGDFHAGLNM 202 Query: 204 AALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 AA+ N VI+ NN YA+ T A + RG+ + I ++VDG D+ A+ A + Sbjct: 203 AAVLNCPVIFFCRNNGYAISTPAEEQFAGDGIASRGLGYGIKTIRVDGNDVLAIHAATKE 262 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQV 314 A K P++IE +TYR HS S DP YR+REE ++ R+ DPI ++ Sbjct: 263 ARRIAIEEKCPVLIEAMTYRLAAHSTSDDPTGYRSREEEDKWRAK-DPIARM 313 >gi|87119954|ref|ZP_01075850.1| Alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Marinomonas sp. MED121] gi|86164656|gb|EAQ65925.1| Alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Marinomonas sp. MED121] Length = 396 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 91/326 (27%), Positives = 154/326 (47%), Gaps = 13/326 (3%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 ++ E ++ L Y L +R +E+ G + F G+EA +G +L + Sbjct: 42 QMPEIDQTLALKIYDTFLFVRALDERMLASQRQGRIS-FYMTETGEEAADIGSAAALHDE 100 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D ++ YRE G + G + + M ++ + KG+ +H S K + + Sbjct: 101 DMIMAQYREQGALAFRGFEPDEFMNQIFSNEKDYGKGRQMPIHYGSNKLHYMTVSSPLAT 160 Query: 163 QVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 Q+ TG A+A K + CV+C FGDGAA++G + + N+A + I+ NN YA Sbjct: 161 QLPQATGYAYALKAQNKAN-CVICYFGDGAASEGDFHAALNMAGVLKTPSIFFCRNNGYA 219 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T A + RGV+ + ++VDG D+ AV +A P++IE +T Sbjct: 220 ISTPAHEQFAGDGIAPRGVALGLKTIRVDGNDVLAVLKATQEARKLAVEQNQPVLIEAMT 279 Query: 282 YRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YR HS S DP+ YR + E + R+ P+ + ++ L+ W E E E +++ Sbjct: 280 YRLGAHSSSDDPSGYRNKSEEDTWRAKC-PVLRFKQWLIKQAWWDE----EQEAARQEVH 334 Query: 341 NNSVEFA--QSDKEPDPA--ELYSDI 362 SV A + +K P PA EL++D+ Sbjct: 335 RTSVVKAMKKGEKVPAPALDELFNDV 360 >gi|329929820|ref|ZP_08283496.1| 2-oxoisovalerate dehydrogenase subunit alpha [Paenibacillus sp. HGF5] gi|328935798|gb|EGG32259.1| 2-oxoisovalerate dehydrogenase subunit alpha [Paenibacillus sp. HGF5] Length = 342 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 127/256 (49%), Gaps = 5/256 (1%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAY 109 Q L Y+ M+L R+F+E+ L G + F IGQEA V +L E D + Y Sbjct: 23 QVLDMYKYMVLARKFDERNLLLQRAGKIN-FHVSGIGQEACQVAAAFALDREKDYFLPYY 81 Query: 110 REHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 R++G +LA G+ ++M + + S G+ H S + G V QV Sbjct: 82 RDYGFVLAVGMTPRELMLSAFAKAEDPNSGGRQMPGHFGSKRLRIVTGSSPVTTQVPHAV 141 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G A A K ++ D + V FG+G++NQG +E N A + L VI + ENNQYA+ + + Sbjct: 142 GFALAAKMQKKDFVSFVTFGEGSSNQGDFHEGCNFAGVHKLPVIIMCENNQYAISVPLHK 201 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 S R + + PG++VDG D V A + +A +GP +IE + YR HS Sbjct: 202 -QISGKVSDRALGYGFPGVRVDGNDALEVYAAVKEARERAIRGEGPTLIESMMYRLSPHS 260 Query: 289 MSD-PANYRTREEINE 303 SD YRT+EE+ E Sbjct: 261 TSDNDLAYRTKEEVEE 276 >gi|312139114|ref|YP_004006450.1| branched-chain alpha/keto acid dehydrogenase e1 alpha subunit [Rhodococcus equi 103S] gi|311888453|emb|CBH47765.1| branched-chain alpha/keto acid dehydrogenase E1 alpha subunit [Rhodococcus equi 103S] Length = 365 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 100/322 (31%), Positives = 154/322 (47%), Gaps = 17/322 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 VS+ EQ + Y +++ RR + +A L G +G + L +GQEA VG +L D Sbjct: 28 VSDVGPEQLRALYEDLVVSRRIDTEATALQRQGQLGIWAPL-LGQEAAQVGSARALERDD 86 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + T+YREH GVD +M + R S +++M + +VGAQ Sbjct: 87 YIFTSYREHAVAYCRGVD-PDVMTRMW-RGCAHSGWDPATVNMTNPAI-------VVGAQ 137 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A ++ VV FGDGA +QG + E+ AA V++ +NNQ+A+ Sbjct: 138 GLHATGYALGAHLDGAEIATVVYFGDGATSQGDLSEALGFAATLAAPVVFFCQNNQWAIS 197 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V S T + R + +P +QVDG D+ AV A +A R GP +E +TYR Sbjct: 198 EPVHLQSP-TPIAARAAGYGMPAVQVDGNDVLAVLAVTREAARRARDGGGPSFVEAVTYR 256 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKII 340 H+ S DP YRT E +E+ DPI+++R RLL + + +E D + ++ + Sbjct: 257 MGPHTTSDDPTRYRTAAE-SELWRARDPIDRMR-RLLEREGLFDAEFDAR-VQGRADDVA 313 Query: 341 NNSVEFAQSDKEPDPAELYSDI 362 A +P P EL+ + Sbjct: 314 TRLRAGALEAPDPGPDELFEHV 335 >gi|288553241|ref|YP_003425176.1| pyruvate dehydrogenase E1 (lipoamide) subunit alpha [Bacillus pseudofirmus OF4] gi|288544401|gb|ADC48284.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Bacillus pseudofirmus OF4] Length = 361 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 87/322 (27%), Positives = 162/322 (50%), Gaps = 17/322 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + E+ + M+ R ++++A L G +G + + GQEA ++G + +L + D Sbjct: 31 MPELSDEELQEIMKRMVYTRIWDQRAISLNRQGRLGFYAPVA-GQEASMLGSQFALDKED 89 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ + G GG G ++ + +GAQ Sbjct: 90 WILPGYRDIPQIVFHGLPLHQAFLWSRGHYGGGEIPDGLNIMVPQII---------IGAQ 140 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K ++ + I + GDG A+QG YE N A +N +++++NN++A+ Sbjct: 141 IIQTAGVALGLKRKKKNNIAITYTGDGGASQGDFYEGMNFAGAYNAPAVFIVQNNRFAIS 200 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V + SA +++ V+ I G+QVDGMD+ AV A +A A GP +IE +TYR Sbjct: 201 VPVEKQSAAKTIAQKAVAAGIEGIQVDGMDVLAVYAATKQARERALAGDGPTLIETMTYR 260 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 Y H+M+ DP YR+ ++++ + DP+ + RK L +E E+ ++ I Sbjct: 261 YGPHTMAGDDPTRYRS-SDLDDEWTKKDPLVRFRKFLEGKGLWTEEQENEVVDKAKEDIK 319 Query: 342 NSVEFAQSDKEPDPAELYSDIL 363 ++++ A S P + +D++ Sbjct: 320 DAMKKADS----TPKQKVTDLI 337 >gi|163796017|ref|ZP_02189980.1| 2-oxoisovalerate dehydrogenase alpha subunit protein [alpha proteobacterium BAL199] gi|159178772|gb|EDP63310.1| 2-oxoisovalerate dehydrogenase alpha subunit protein [alpha proteobacterium BAL199] Length = 410 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 6/276 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 N EQ L R M+ +R F+ + G F C+G+EA+ + +L+ GD Sbjct: 72 LNDEQALQGLRDMMKVRAFDARMLMAQRQGKTS-FYMQCLGEEAISCAFQHALSPGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A G +M ++ + G+ + S +GF+ G +G Q Sbjct: 131 PTYRQQGLLVAGGYPLVDMMCQIFSNERDPLHGRQLPVMYSSKDHGFFSISGNLGTQYIQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ + +I GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 AVGWAMASAIKGDTRIAAGWIGDGSTAESDFHAALVFASTYKAPVVLNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A A+ R + GP ++E +TYR Sbjct: 251 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVYAVAQWAIERARRNLGPTVVEYVTYRV 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 HS S DP+ YR +EE ++ DPIE+++ L+ Sbjct: 310 AAHSTSDDPSAYRPKEE-SDAWPLGDPIERLKNYLI 344 >gi|283806367|dbj|BAI66425.1| 2-oxoisovalerate dehydrogenase [Triticum aestivum] Length = 469 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 83/318 (26%), Positives = 148/318 (46%), Gaps = 2/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +KE L Y M+ ++ + + G + F G+EA+ + +L+ D + Sbjct: 121 EVSKELALKMYSNMVTLQIMDTIFYEAQRQGRIS-FYLTSNGEEAINIASAAALSAQDIV 179 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + YRE G +L G + +L G + KG+ +H S + ++ + Q+ Sbjct: 180 LPQYREPGVLLWRGFTLQEFANQLFGNKLDYGKGRQMPIHYGSNRLNYFTVSSPIATQLP 239 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A++ K + + FGDG ++G + + N AA+ VI+ NN +A+ T Sbjct: 240 QAVGAAYSLKMDKKKACAITYFGDGGTSEGDFHAALNFAAVTEAPVIFFCRNNGWAISTP 299 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + RG ++ I ++VDG D AV + + A PI+IE +TYR Sbjct: 300 TAEQFRSDGVVTRGQAYGIRSIRVDGNDTLAVYSAVHTAREMAITEGRPILIEAMTYRVG 359 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HS SD + YR +E+ R+ DP+ + RK + N W + E+ NVR+ + ++ Sbjct: 360 QHSTSDDSTKYRPADEMEHWRTARDPVSRYRKWVQGNGWWCDTQESELRNNVRQELLQAI 419 Query: 345 EFAQSDKEPDPAELYSDI 362 + A+ + AEL++D+ Sbjct: 420 QVAERMPKHGLAELFTDV 437 >gi|327276395|ref|XP_003222955.1| PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial-like [Anolis carolinensis] Length = 447 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 142/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E + +KEQ L Y+ M L+ + + G + F G+E +G +L + Sbjct: 95 EDPQLSKEQVLKFYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHIGSAAALDDT 153 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ G MA+ G KG+ +H F + Sbjct: 154 DLVFGQYREAGVLMHRGYPLDLFMAQCYGNATDPGKGRQMPVHYGCKDLHFVTISSPLAT 213 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K +++I + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 214 QIPQAVGSAYAIKRENNNRIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 273 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 274 STPTSEQYRGDGIAARGPGYGIHSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 333 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R + W E K RK + Sbjct: 334 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYMTGRGWWDEEQEKIWRKKSRKRVM 393 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P L+SD+ Sbjct: 394 EAFEEAERKLKPKFQHLFSDV 414 >gi|332242782|ref|XP_003270562.1| PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial-like [Nomascus leucogenys] Length = 457 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 90/321 (28%), Positives = 143/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 105 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 163 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 164 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 223 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 224 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 283 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 284 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 343 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R LL W E K RK + Sbjct: 344 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRKKVM 403 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 404 EAFEQAERKPKPNPNLLFSDV 424 >gi|184201771|ref|YP_001855978.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Kocuria rhizophila DC2201] gi|183582001|dbj|BAG30472.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Kocuria rhizophila DC2201] Length = 400 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 82/320 (25%), Positives = 157/320 (49%), Gaps = 12/320 (3%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G E + E+ L+AY +++ RR ++ L G + + GQEA V + L Sbjct: 65 GHEYPMPDTERLLNAYEKLVVGRRINDQNMALVRQGRMAVYPS-SHGQEACQVAAALCLE 123 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 + D + YR+ +++ GVD ++M+ G G K + + +T + Sbjct: 124 DDDWLFPTYRDSVAVMSRGVDPLEVMSTYRGDWHGGYDPKKYKVSIQATP---------L 174 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q+ G+A A K R + + + GDGA ++G +E+ N AA++ L V+++++NN Y Sbjct: 175 TTQLLHAVGVAHAAKLRGENTVTLAMCGDGATSEGDFHEALNFAAVFQLPVLFLVQNNGY 234 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ +S + + + +GV + + +VDG D+ A+ + + + + CR GP+++E + Sbjct: 235 AISVPLSSQTRAPSLAHKGVGYGMASERVDGNDLAAMLSVLGRGIELCRQGGGPLLVEAM 294 Query: 281 TYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR + H+ D YR R+E++E + DPI ++++ L E +I + + Sbjct: 295 TYRMQAHTNADDDTRYRERDEVSEWVAK-DPITRMQRYLEGQGALDEDATGKISGHAEAM 353 Query: 340 INNSVEFAQSDKEPDPAELY 359 E S + DP +L+ Sbjct: 354 AKRLREAMSSKPDLDPQDLF 373 >gi|260583598|ref|ZP_05851346.1| pyruvate dehydrogenase complex E1 component, alpha subunit, acetyl-transferring [Granulicatella elegans ATCC 700633] gi|260158224|gb|EEW93292.1| pyruvate dehydrogenase complex E1 component, alpha subunit, acetyl-transferring [Granulicatella elegans ATCC 700633] Length = 368 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 86/297 (28%), Positives = 140/297 (47%), Gaps = 15/297 (5%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R E++ L G +G F GQEA + ++ +GD ++ YR+ ++ Sbjct: 53 MVWSRILHERSTALNRQGRLG-FYAPTAGQEASQLASIKAIDKGDVLLPGYRDVPQLVKH 111 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ S+ G G +M+ I+GAQ G+A + R Sbjct: 112 GLPLSQAFLWSRGHVAG---------NMYPESLKALPPQIIIGAQYVQAAGVALGLQKRG 162 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + V GDG ++QG YE N A + I+ I+NN +A+ T +A T +++ Sbjct: 163 KKNVAVTYTGDGGSSQGDFYEGINYAGAYKSPAIFFIQNNGWAISTPRELQTAATTLAQK 222 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ IPG+QVDGMD AV A KA Y A GP++IE + +RY H++S DP Y+ Sbjct: 223 AVAAGIPGIQVDGMDPLAVYAVTKKAREYAVAGNGPVLIETICFRYGPHTLSGDDPTRYQ 282 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 E I + + DP+ + R L SE E+ ++ I +++ ++DK+P Sbjct: 283 P-EGIQDAWAKKDPLIRFRNYLTAKGLWSEEKENEVIEATKEEIKEAIK--EADKQP 336 >gi|296823450|ref|XP_002850447.1| 2-oxoisovalerate dehydrogenase subunit alpha [Arthroderma otae CBS 113480] gi|238838001|gb|EEQ27663.1| 2-oxoisovalerate dehydrogenase subunit alpha [Arthroderma otae CBS 113480] Length = 447 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 107/372 (28%), Positives = 180/372 (48%), Gaps = 39/372 (10%) Query: 13 IKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIR-----RFE- 66 + A NP++ R S VD + + E+ ++ Y+ ML + FE Sbjct: 57 VTPAANPAIPTYRVMDSEGVIVD----KSRGPPDVTDEEVITWYKNMLCVSIMDMIMFEA 112 Query: 67 EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIM 126 ++ G+L F + G+E + VG +L++ D + YRE G G + M Sbjct: 113 QRQGRL-------SFYMVSAGEEGIAVGSAAALSKDDVVFCQYRETGVFQQRGFTLKQFM 165 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR-----RSDK 181 ++L + KG+ +H Y + Q+ +G A+A K + ++K Sbjct: 166 SQLFANRNDSGKGRNMPVHYGGKDVKTYTISSTLATQIPHASGAAYALKMKALQDPNAEK 225 Query: 182 ICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 V C FG+GAA++G + + NIAA + VI++ NN YA+ T + RG+ Sbjct: 226 QVVACYFGEGAASEGDFHAALNIAATRSCPVIFICRNNGYAISTPTLEQYRGDGIASRGI 285 Query: 241 SFNIPGMQVDGMDIRAVK-ATMDKAVAYCRAHKG---PIIIEMLTYRYRGHSMSDPA-NY 295 + I ++VDG DI AV+ AT++ A RA +G PI+IE ++YR HS SD + Y Sbjct: 286 GYGIDTIRVDGNDIFAVREATLE---ARKRALEGSMRPILIEAMSYRISHHSTSDDSFAY 342 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 R R E+ + + +PI ++RK + NK W + D +E +RK + EFA +++E Sbjct: 343 RARVEVEDWKRRDNPISRLRK-WMENKGIWNEDLD-RETREQLRKDV--LAEFAAAEREK 398 Query: 354 DPA--ELYSDIL 363 PA E+++D+ Sbjct: 399 KPALKEIFTDVF 410 >gi|296131210|ref|YP_003638460.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cellulomonas flavigena DSM 20109] gi|296023025|gb|ADG76261.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cellulomonas flavigena DSM 20109] Length = 386 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 87/269 (32%), Positives = 130/269 (48%), Gaps = 15/269 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L RRF+ +A L G +G + +GQE VG +L D + +YREHG Sbjct: 49 YRDMVLTRRFDLEATSLQRQGELGLWAQ-SLGQEGAAVGSGHALAPQDHVFPSYREHGVA 107 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI---VGAQVS--LGTGI 170 G++ + ++ G G + H+F+ G + H +G Q +GTG Sbjct: 108 FVRGLEMTDLLRLFRGVDHGGWDPAAHNFHLFTLVIGSHTLHATGYAMGVQRDGLVGTG- 166 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 + R D V FGDGA QG V E+ A++ V+ +NNQ+A+ +R Sbjct: 167 ---DPAR--DTAVVAYFGDGATAQGDVNEALVFASVNQAPVVLFCQNNQFAISEPTTR-Q 220 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A+ + R F IP ++VDG D+ A A +A+ R+ GP +E TYR H+ S Sbjct: 221 ARVPLANRAPGFGIPSVRVDGNDVLATYAVTRQALDRARSGGGPTFVEAFTYRMGAHTTS 280 Query: 291 -DPANYRTREEINEMRSNHDPIEQVRKRL 318 DP YRT E+ R DPI+++R L Sbjct: 281 DDPTRYRTAEQEEHWR-RRDPIDRLRTYL 308 >gi|125777311|ref|XP_001359565.1| GA20891 [Drosophila pseudoobscura pseudoobscura] gi|54639312|gb|EAL28714.1| GA20891 [Drosophila pseudoobscura pseudoobscura] Length = 439 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 87/310 (28%), Positives = 145/310 (46%), Gaps = 4/310 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R MLL+ ++ + G + F G+EA +G +L D + YRE G + Sbjct: 98 FRDMLLLNTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAALEMRDLIYGQYREAGVL 156 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G + + + G + +GK +H S + F + Q+ G A+A K Sbjct: 157 VWRGFRIDQFIDQCYGNVDDLGRGKQMPVHYGSRELNFVTISSPLSTQMPQAVGAAYAMK 216 Query: 176 YRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 R ++ CVVC FG+GAA++G + +FN AA N VI NN +A+ T Sbjct: 217 MRPNNDACVVCYFGEGAASEGDAHAAFNFAATLNCPVILFCRNNGFAISTPSHEQYRGDG 276 Query: 235 FSKRG-VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + RG + + I ++VDG D+ AV M +A Y P++ E L YR HS SD + Sbjct: 277 IAGRGPMGYGIATIRVDGTDVFAVYNAMKEAREYVLRENKPVVFEALAYRVGHHSTSDDS 336 Query: 294 N-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR+ EEI S PI ++++ ++H W E + VRK + + ++ + Sbjct: 337 TAYRSTEEIEVWNSVEHPISKLKRYMVHKGWFDEAEETAYIKEVRKKVLKQIAVSEKKLK 396 Query: 353 PDPAELYSDI 362 P+ E++ + Sbjct: 397 PNWKEMFEGV 406 >gi|195153136|ref|XP_002017485.1| GL22326 [Drosophila persimilis] gi|194112542|gb|EDW34585.1| GL22326 [Drosophila persimilis] Length = 439 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 87/310 (28%), Positives = 145/310 (46%), Gaps = 4/310 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R MLL+ ++ + G + F G+EA +G +L D + YRE G + Sbjct: 98 FRDMLLLNTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAALEMRDLIYGQYREAGVL 156 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G + + + G + +GK +H S + F + Q+ G A+A K Sbjct: 157 VWRGFRIDQFIDQCYGNVDDLGRGKQMPVHYGSRELNFVTISSPLSTQMPQAVGAAYAMK 216 Query: 176 YRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 R ++ CVVC FG+GAA++G + +FN AA N VI NN +A+ T Sbjct: 217 MRPNNDACVVCYFGEGAASEGDAHAAFNFAATLNCPVILFCRNNGFAISTPSHEQYRGDG 276 Query: 235 FSKRG-VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + RG + + I ++VDG D+ AV M +A Y P++ E L YR HS SD + Sbjct: 277 IAGRGPMGYGIATIRVDGTDVFAVYNAMKEAREYVLRENKPVVFEALAYRVGHHSTSDDS 336 Query: 294 N-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR+ EEI S PI ++++ ++H W E + VRK + + ++ + Sbjct: 337 TAYRSTEEIEVWNSVEHPISKLKRYMVHKGWFDEAEETAYIKEVRKKVLKQIAVSEKKLK 396 Query: 353 PDPAELYSDI 362 P+ E++ + Sbjct: 397 PNWKEMFEGV 406 >gi|172058020|ref|YP_001814480.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Exiguobacterium sibiricum 255-15] gi|171990541|gb|ACB61463.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Exiguobacterium sibiricum 255-15] Length = 360 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 92/316 (29%), Positives = 161/316 (50%), Gaps = 24/316 (7%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + E+ R ++ R ++++A L G +G + + GQEA ++G + +L + D Sbjct: 31 MPDLSDEELTELMRRLVYTRIWDQRAISLNRQGRLGFYAPVA-GQEASMIGSQFALDKDD 89 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGK---GGSMHMFSTKNGFYGGHGIV 160 ++ YR+ ++ G K A L R G I+ GK G ++ M I+ Sbjct: 90 WILPGYRDIPQMVFHGFPLYK--AFLFSR-GHITGGKIPEGVNVLMPQI---------II 137 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQ+ G+A K +++ + GDG ++QG YE N A + I+V++NN++ Sbjct: 138 GAQIVQAAGVALGLKKSGKEQVAITYTGDGGSSQGDFYEGMNFAGAFKAPAIFVVQNNRF 197 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEM 279 A+ T V + S +++ V+ I G+QVDGMD+ AV A + A A G P +IE Sbjct: 198 AISTPVEKQSMAKTIAQKAVAAGINGIQVDGMDVLAVYAATKQ--ARVEALNGVPTLIET 255 Query: 280 LTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 LTYRY H+++ DP YRT++ +E ++ DP+ + R + +E E+ + Sbjct: 256 LTYRYGPHTLAGDDPTRYRTKDMDDEYQA-QDPLVRFRAFMETKGLWNEDKENEVIEQAK 314 Query: 338 KIINNSVEFAQSDKEP 353 + ++ AQ+DKEP Sbjct: 315 ADVKEAL--AQADKEP 328 >gi|302688557|ref|XP_003033958.1| hypothetical protein SCHCODRAFT_107126 [Schizophyllum commune H4-8] gi|300107653|gb|EFI99055.1| hypothetical protein SCHCODRAFT_107126 [Schizophyllum commune H4-8] Length = 448 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 81/328 (24%), Positives = 155/328 (47%), Gaps = 5/328 (1%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L+G + E ++ Y M+L+ + + G + F G+EA +VG + Sbjct: 73 LDGSSMPEIDEATARKIYEHMVLLPTMDTVLYNVQRQGKIS-FYMTAYGEEATVVGAAAA 131 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGH 157 L D+++ YRE G +L G IM + G + +KG+ +H S ++ FY Sbjct: 132 LEPHDEVLGQYRESGVLLWRGFGLDNIMGQCLGNVEDTSTKGRQMPVHFASREHHFYSIS 191 Query: 158 GIVGAQVSLGTGIAFANKYR--RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + Q+ G+ FA + R + I V G+GAA++G + +A+ ++++ Sbjct: 192 SPLATQIPQAAGVGFALRRTPGRQNSIAVCFMGEGAASEGDFHAGLQMASTLPCPTMFIV 251 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 NN +A+ T + + RG + I ++VDG D+ AV + + +A C + Sbjct: 252 RNNGFAISTPSTEQYHGDGIASRGPGYGIDTIRVDGNDVLAVLSAVKEARKRCLEQSRAV 311 Query: 276 IIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 ++E +TYR HS SD + YR R E+ + + +PI ++R+ + W S + +E++ Sbjct: 312 LVEAMTYRVGHHSTSDDSFAYRARSEVEDRKKIDNPISRMRRFMEERGWWSAKEEEELKA 371 Query: 335 NVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++ + + + A+ P EL+ D+ Sbjct: 372 RLKADVMKAFKRAEGLSRPSLTELFDDV 399 >gi|172056956|ref|YP_001813416.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Exiguobacterium sibiricum 255-15] gi|171989477|gb|ACB60399.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Exiguobacterium sibiricum 255-15] Length = 337 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 90/306 (29%), Positives = 150/306 (49%), Gaps = 6/306 (1%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 I F E E+ ++ + + M+ R+ +E+ +L G + F C GQEA VG Sbjct: 4 IEFKELVELG-LTEQDAIQMFETMVRARKIDERMWKLNRAGKIP-FLVSCQGQEAAQVGA 61 Query: 96 KMSLTEG-DQMITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGF 153 +L +G D ++ YR+ G +L G + IM + + S G+ H S Sbjct: 62 AFALEKGTDYILPYYRDLGVVLHFGQTSRDIMLSAFAKAEDPNSGGRQMPGHYGSRALNI 121 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 G V QV GIA A K RR + V FG+G++NQG +E N A + L VI Sbjct: 122 VTGSSPVTTQVPHAVGIALAAKMRREPLVAYVSFGEGSSNQGDFHEGANFAGIHKLPVIL 181 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 ENN+YA+ T +S+ + + + R + + +PG+ +DG+D AV + +A G Sbjct: 182 FCENNKYAISTPLSKQLSAKHVADRAIGYGMPGVTIDGIDPLAVYKAVKEARERGLRGDG 241 Query: 274 PIIIEMLTYRYRGHSM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P +IE+ R HS D +YR+ EE+ E+++ D ++ R++L+ +E +E+ Sbjct: 242 PTLIEVEVERLVPHSSDDDDKSYRSAEELAELKT-RDGVKLFREKLIQMGVLTEETAQEL 300 Query: 333 EMNVRK 338 E + + Sbjct: 301 ETKLEQ 306 >gi|163839326|ref|YP_001623731.1| pyruvate dehydrogenase E1 component alpha subunit [Renibacterium salmoninarum ATCC 33209] gi|162952802|gb|ABY22317.1| pyruvate dehydrogenase E1 component alpha subunit [Renibacterium salmoninarum ATCC 33209] Length = 391 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 88/298 (29%), Positives = 138/298 (46%), Gaps = 24/298 (8%) Query: 28 TSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIG 87 T D +PF + EQ YR M + RRF+++A L G + + IG Sbjct: 38 TRRDDADFVPFAD-----RLAPEQLRQFYRDMAVARRFDQEATALQRQGELALWVP-EIG 91 Query: 88 QEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMF 147 QEA VG + D + YREH L G+ K++ G G K H++ Sbjct: 92 QEAAQVGSGRASKPQDYLFPTYREHAIALIRGIGPEKLLKLFRGISHGGWNPKDYGFHLY 151 Query: 148 STKNGFYGGHGIVGAQVSLGTGIAF------ANKYRRSDKICVVCFGDGAANQGQVYESF 201 + ++ AQ G A A + + FGDGA+++G V+ES Sbjct: 152 TL---------VLAAQTLHAVGYAMGIQRDQAKNPEAAPAATIAYFGDGASSEGDVHESM 202 Query: 202 NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 AA +N V++ +NNQ+A+ S + ++R + PG++VDG D+ AV A Sbjct: 203 VFAASFNAPVVFFCQNNQWAISVPFEVQS-RVPLAERAKGYGFPGIRVDGNDVLAVHAVT 261 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 + A+ + R GP++IE +TYR H+ + DP YR EE ++ S DP+ ++ K L Sbjct: 262 EWALDHARNGHGPVLIEAVTYRLGAHTTADDPTKYRRSEE-EQLWSTRDPLTRLEKLL 318 >gi|179360|gb|AAA35590.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Homo sapiens] Length = 378 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 144/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 26 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 84 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 85 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 144 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G ++ FN AA +I+ NN YA+ Sbjct: 145 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHDGFNFAATLECPIIFFCRNNGYAI 204 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 205 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 264 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R LL W E K R+ + Sbjct: 265 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 324 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 325 EAFEQAERKPKPNPNLLFSDV 345 >gi|284166270|ref|YP_003404549.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Haloterrigena turkmenica DSM 5511] gi|284015925|gb|ADB61876.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Haloterrigena turkmenica DSM 5511] Length = 387 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 90/310 (29%), Positives = 149/310 (48%), Gaps = 21/310 (6%) Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 S YR M RRF+E+ L G +G + L GQE +G +L + D + YREHG Sbjct: 53 SMYRDMYFSRRFDERMISLQRQGRLGTYASLA-GQEGSQIGSTYALADDDMLSFQYREHG 111 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 I++ + ++ + G + + + +F N GGH + G ++A Sbjct: 112 AIVSRDLPWEYLLYWMGHEDGNAALAE---IDVFPL-NISIGGH------LPHAVGWSWA 161 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K ++ VV FGDGA ++G +E+ N A +++ I+V NNQ+A+ + +A Sbjct: 162 AKLNDDERASVVHFGDGATSEGDFHEAMNFAGVFDTPTIFVCNNNQWAISIARENQTASA 221 Query: 234 NFSKRGVSFNIPGMQVDGMDIRA----VKATMDKAVAYCRAHKG---PIIIEMLTYRYRG 286 +++ ++ G+QVDGMD A A +KA+A G P +IE + YRY Sbjct: 222 TIAQKADAYGFEGVQVDGMDPLASYVVTGAAREKAIAARSGDDGRPRPTLIEAVQYRYGA 281 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 H+ + DP+ YR EE+ R DPI++ L + + ++ IE + + V+ Sbjct: 282 HTTADDPSVYRDDEEVERWR-ERDPIDRFETYLRNRGVLDDERIETIESEIEATLEELVD 340 Query: 346 FAQSDKEPDP 355 A+S E DP Sbjct: 341 RAES-AEADP 349 >gi|297845120|ref|XP_002890441.1| hypothetical protein ARALYDRAFT_313033 [Arabidopsis lyrata subsp. lyrata] gi|297336283|gb|EFH66700.1| hypothetical protein ARALYDRAFT_313033 [Arabidopsis lyrata subsp. lyrata] Length = 472 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 136/283 (48%), Gaps = 1/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ + +L+ D ++ YRE G +L G + + G + KG+ Sbjct: 158 FYLTSVGEEAINIASAAALSPDDVVLPQYREPGVLLWRGFTLEEFANQCFGNKADYGKGR 217 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + ++ + Q+ G+ ++ K + + V GDG ++G + Sbjct: 218 QMPIHYGSNRLNYFTISSPIATQLPQAAGVGYSLKMDKKNACAVTFIGDGGTSEGDFHAG 277 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N AA+ V+++ NN +A+ T +S +G ++ I ++VDG D AV Sbjct: 278 LNFAAVMEAPVVFICRNNGWAISTHISEQFRSDGIVVKGQAYGIRSIRVDGNDALAVYTA 337 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A + P++IE +TYR HS SD + YR +EI + + +P+ + RK + Sbjct: 338 VRSAREMAVTEQRPVLIEAMTYRVGHHSTSDDSTKYRAADEIQYWKMSRNPVNRFRKWVE 397 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 N W SE D ++ N RK + +++ A+ ++ EL++D+ Sbjct: 398 DNGWWSEEDESKLRSNARKQLLQAIQAAEKWEKQPLTELFNDV 440 >gi|49483767|ref|YP_040991.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus MRSA252] gi|257425643|ref|ZP_05602067.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus 55/2053] gi|257428304|ref|ZP_05604702.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus 65-1322] gi|257430941|ref|ZP_05607321.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus 68-397] gi|257433630|ref|ZP_05609988.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus E1410] gi|257436543|ref|ZP_05612587.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus M876] gi|282904100|ref|ZP_06311988.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus C160] gi|282905927|ref|ZP_06313782.1| 2-oxoisovalerate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus Btn1260] gi|282908837|ref|ZP_06316655.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911156|ref|ZP_06318958.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282914325|ref|ZP_06322111.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus M899] gi|282919294|ref|ZP_06327029.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus C427] gi|282924619|ref|ZP_06332287.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus aureus subsp. aureus C101] gi|293503400|ref|ZP_06667247.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus 58-424] gi|293510416|ref|ZP_06669122.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus M809] gi|293530956|ref|ZP_06671638.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus M1015] gi|295428096|ref|ZP_06820728.1| 2-oxoisovalerate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590938|ref|ZP_06949576.1| 3-methyl-2-oxobutanoate dehydrogenase [Staphylococcus aureus subsp. aureus MN8] gi|49241896|emb|CAG40590.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus MRSA252] gi|257271337|gb|EEV03483.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus 55/2053] gi|257275145|gb|EEV06632.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus 65-1322] gi|257278371|gb|EEV09007.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus 68-397] gi|257281723|gb|EEV11860.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus E1410] gi|257283894|gb|EEV14017.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus M876] gi|282313454|gb|EFB43849.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus aureus subsp. aureus C101] gi|282317104|gb|EFB47478.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus C427] gi|282321506|gb|EFB51831.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus M899] gi|282324851|gb|EFB55161.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282327101|gb|EFB57396.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331219|gb|EFB60733.1| 2-oxoisovalerate dehydrogenase E1 component alpha subunit [Staphylococcus aureus subsp. aureus Btn1260] gi|282595718|gb|EFC00682.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus C160] gi|290920224|gb|EFD97290.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus M1015] gi|291095066|gb|EFE25331.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus 58-424] gi|291466780|gb|EFF09300.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Staphylococcus aureus subsp. aureus M809] gi|295128454|gb|EFG58088.1| 2-oxoisovalerate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575824|gb|EFH94540.1| 3-methyl-2-oxobutanoate dehydrogenase [Staphylococcus aureus subsp. aureus MN8] gi|312438014|gb|ADQ77085.1| 3-methyl-2-oxobutanoate dehydrogenase [Staphylococcus aureus subsp. aureus TCH60] gi|315195419|gb|EFU25806.1| 2-oxoisovalerate dehydrogenase alpha subunit [Staphylococcus aureus subsp. aureus CGS00] Length = 330 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 134/306 (43%), Gaps = 3/306 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM +L EGD YR+ + Sbjct: 18 YKWMDLGRKIDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYALEEGDITAPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ A G++ + S GK H S V Q+ G A A Sbjct: 77 TYMGISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSSPVATQIPHAVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K KI G+G++NQG +E N A + L + VI NN+YA+ S A Sbjct: 137 KMDGKKKIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + + G QVDG D A+ M +A + +G +IE +T R HS D Sbjct: 197 LSDRALGYGLHGEQVDGNDPLAMYKAMKEARDRAISGQGSTLIEAVTSRMTAHSSDDDDQ 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE E D E+ +K LL + L EIE + IIN + + A+ P Sbjct: 257 YRTKEE-REALKKADCNEKFKKELLSAGIIDDAWLAEIEAEHKDIINKATKAAEDAPYPS 315 Query: 355 PAELYS 360 E Y+ Sbjct: 316 VEEAYA 321 >gi|299743662|ref|XP_001835904.2| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Coprinopsis cinerea okayama7#130] gi|298405760|gb|EAU85969.2| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Coprinopsis cinerea okayama7#130] Length = 449 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 88/329 (26%), Positives = 155/329 (47%), Gaps = 6/329 (1%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 LEG E+ E ++ Y M L+ + + G + F G+EA I+G Sbjct: 73 LEGAELPEMDEAYARRLYEYMQLLPTLDNVLYNIQRQGKIS-FYMTSYGEEATIIGSAAG 131 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS-KGKGGSMHMFSTKNGFYGGH 157 L D+++ YRE G +L G K+M + G + S KG+ +H S ++ F+ Sbjct: 132 LENDDEVLGQYREMGVLLWRGFGLDKVMGQCFGNEEDTSGKGRQMPVHFGSPEHHFHTIS 191 Query: 158 GIVGAQVSLGTGIAFA---NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 +G Q+ G+ FA + RRS I FG+GAA++G + +A+ +Y+ Sbjct: 192 SPLGTQIPQAAGVGFALRRDPNRRSRSIAACYFGEGAASEGDFHAGLMLASTIPAPTLYI 251 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 NN +A+ T S + RG + I ++VDG D+ AV + +A C Sbjct: 252 ARNNGFAISTPSSEQYHGDGIASRGPGYGIDTIRVDGNDVLAVINAVREARRRCLGQGRA 311 Query: 275 IIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 ++IE ++YR HS SD + YR R E+ + + +PI + R L W + +E++ Sbjct: 312 VLIEAMSYRVGHHSTSDDSFAYRPRSEVEDRKRLDNPILRFRYFLESRGWWNNEAEEELK 371 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++ + + + ++S K + EL++D+ Sbjct: 372 ARLKADVMKAFKRSESLKRWELGELFTDV 400 >gi|329935715|ref|ZP_08285520.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces griseoaurantiacus M045] gi|329304806|gb|EGG48679.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces griseoaurantiacus M045] Length = 378 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 76/270 (28%), Positives = 131/270 (48%), Gaps = 12/270 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR ++ RRF +A L G + + GQEA V L E D + +YR+ Sbjct: 51 LRLYRQLVTGRRFNAQATALTKQGRLAVYPS-STGQEACEVTAAAVLEERDWLFPSYRDT 109 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 +++ GVD + + L +G G H + + + Q+ G+A Sbjct: 110 LAVVSRGVDPVRALTLL---RGDWHTGYDPHEHRVAPLST------PLATQLPHAVGLAH 160 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + + D + + GDG ++G +E+ N AA+W V+++++NN +A+ +++ +A Sbjct: 161 AARLKGDDVVALALVGDGGTSEGDFHEALNFAAVWQAPVVFLVQNNGFAISVPLAKQTAA 220 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + + + V + +PG VDG D AV + AV R GP ++E +TYR H+ +D Sbjct: 221 PSLAHKAVGYGMPGRLVDGNDAAAVHEVLAGAVRRAREGGGPTLVEAVTYRVEAHTNADD 280 Query: 293 A-NYRTREEINEMRSNHDPIEQVRKRLLHN 321 A YR+ E+ R+ HDPI + + L H Sbjct: 281 AGRYRSESEVETWRA-HDPIVLLEEELTHR 309 >gi|13277798|gb|AAH03787.1| Branched chain ketoacid dehydrogenase E1, alpha polypeptide [Mus musculus] Length = 442 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 90/321 (28%), Positives = 145/321 (45%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L YR M L+ + + G + F G+E VG +L Sbjct: 90 EDPHLPQEEVLKFYRSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALERT 148 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ M++ G KG+ +H + F + Sbjct: 149 DLVFGQYREAGVLMYRDYPLELFMSQCYGNVNDPGKGRQMPVHYGCKERHFVTISSPLAT 208 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K +++I + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 209 QIPQAVGAAYAAKRANANRIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 268 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 269 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 328 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R+ LL+ W E K RK + Sbjct: 329 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVM 388 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P+ L+SD+ Sbjct: 389 EAFEQAERKLKPNPSLLFSDV 409 >gi|62510814|sp|Q8HXY4|ODBA_MACFA RecName: Full=2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial; AltName: Full=Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; Short=BCKDE1A; Short=BCKDH E1-alpha; Flags: Precursor gi|23574708|dbj|BAC20584.1| 2-oxoisovalerate dehydrogenase alpha subunit [Macaca fascicularis] Length = 445 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 90/321 (28%), Positives = 143/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 93 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 151 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 152 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 211 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 212 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 271 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 272 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 331 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R LL W E K RK + Sbjct: 332 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRKKVM 391 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 392 KAFEQAERKPKPNPNLLFSDV 412 >gi|47227873|emb|CAG09036.1| unnamed protein product [Tetraodon nigroviridis] Length = 446 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 83/318 (26%), Positives = 143/318 (44%), Gaps = 2/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +KE L+ Y+ M L+ + + G + F G+E +G +L D + Sbjct: 97 QLSKETVLNFYQKMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHIGSASALDPNDLV 155 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 YRE G ++ G MA+ + KG+ +H F + Q+ Sbjct: 156 FGQYREAGVLMYRGFPLDLFMAQCYANADDLGKGRQMPVHYGCRDLNFVTISSPLATQIP 215 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A+A K + ++ + FG+GAA++G + FN +A +I+ NN YA+ T Sbjct: 216 QAVGAAYAFKRQNMNRAVICYFGEGAASEGDAHAGFNFSATLECPLIFFCRNNGYAISTP 275 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + RG + + ++VDG D+ AV +A A P +IE +TYR Sbjct: 276 TNEQYRGDGIAARGPGYGMLSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIG 335 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HS SD ++ YR+ +E+N PI ++R + W SE D + RK + + Sbjct: 336 HHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYMTARGWWSEDDERSWRKQSRKTVMEAF 395 Query: 345 EFAQSDKEPDPAELYSDI 362 E A+ +P+P L++D+ Sbjct: 396 EKAEKRLKPNPELLFTDV 413 >gi|183396774|ref|NP_031559.3| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial [Mus musculus] gi|74185853|dbj|BAE32795.1| unnamed protein product [Mus musculus] gi|148692301|gb|EDL24248.1| branched chain ketoacid dehydrogenase E1, alpha polypeptide [Mus musculus] Length = 446 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 90/321 (28%), Positives = 145/321 (45%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L YR M L+ + + G + F G+E VG +L Sbjct: 94 EDPHLPQEEVLKFYRSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALERT 152 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ M++ G KG+ +H + F + Sbjct: 153 DLVFGQYREAGVLMYRDYPLELFMSQCYGNVNDPGKGRQMPVHYGCKERHFVTISSPLAT 212 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K +++I + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 213 QIPQAVGAAYAAKRANANRIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 272 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 273 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 332 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R+ LL+ W E K RK + Sbjct: 333 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVM 392 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P+ L+SD+ Sbjct: 393 EAFEQAERKLKPNPSLLFSDV 413 >gi|330837590|ref|YP_004412231.1| Pyruvate dehydrogenase (acetyl-transferring) [Spirochaeta coccoides DSM 17374] gi|329749493|gb|AEC02849.1| Pyruvate dehydrogenase (acetyl-transferring) [Spirochaeta coccoides DSM 17374] Length = 818 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 102/368 (27%), Positives = 161/368 (43%), Gaps = 66/368 (17%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFE------EKAGQLYGMGMV-GGFCHLCIGQEAVIVGM 95 E+ + KE+ R M++IR FE +K G G+ G HL GQE+ VG Sbjct: 35 EIKTWGKERLTRVLRDMMIIREFETMLDVIKKEGVYQGVSHNHKGPAHLSAGQESAAVGQ 94 Query: 96 KMSLTEGDQMITAYREHGHILACGVDA---------SKIM-------------------- 126 ++LT D + ++R HG ILA + A ++IM Sbjct: 95 ALALTPDDFIFGSHRSHGEILAKCLSAVQQIDDAGLTQIMEDFMGGATYKVVKEHFAGTT 154 Query: 127 --------------AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 AE+ + G S G GGSMH F G + IVG ++ G A Sbjct: 155 VKETAENFVLYGALAEIYAKGTGFSAGLGGSMHTFFAPFGSMPNNAIVGGSGTIAFGAAL 214 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV-----------IENNQYA 221 K R I + GDG+ +G V+E+ ++A+ N ++ I +N YA Sbjct: 215 FKKINRRKGIVIANLGDGSMARGPVWEAMVMSAMDQYNTLWKELPGAPPYMINIFDNFYA 274 Query: 222 M-GTSVSRASAQTNFSKRGVSFNIPGM---QVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 M G + S ++ G N M +VDG + AV + A KGP ++ Sbjct: 275 MGGQPIGETSGFGLPARIGAGVNPDAMHTERVDGFNPLAVADATARQKKLLLAGKGPAML 334 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 + +TYRY GHS SD YRT+EE++ R+ DPI L+ NK ++ D+++++ ++ Sbjct: 335 DTITYRYSGHSPSDAMTYRTKEELDAFRA-QDPITGYADYLVANKLLTKKDVEKLDAEIK 393 Query: 338 KIINNSVE 345 + ++E Sbjct: 394 AKMRRNIE 401 >gi|329725367|gb|EGG61850.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus epidermidis VCU144] Length = 332 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 92/303 (30%), Positives = 141/303 (46%), Gaps = 5/303 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM ++ +GD YR+ + Sbjct: 18 YKWMDLGRKTDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYAMQKGDISSPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ M G++ I S GK H + G V Q+ G A A Sbjct: 77 TYMGISPLDTMLSAFGKRDDINSGGKQMPSHFSHKEKGILSQSSPVATQIPHSVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K I G+G++NQG +E N AA+ L + VI NN+YA+ S A Sbjct: 137 KMDNKPNIATATVGEGSSNQGDFHEGMNFAAVHKLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S RG+ + + G+QVDG D AV M +A A +GP +IE +T R HS D Sbjct: 197 LSDRGLGYGMHGIQVDGNDPIAVYKAMKEARERALAGEGPTLIEAVTSRMTPHSSDDDDT 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE + ++ I + + LL +E L ++E +++IN + + A++ P Sbjct: 257 YRTKEERDLLKQEDCNI-KFKTALLDQGIINENWLSQLETEHKELINEATKSAEA--APY 313 Query: 355 PAE 357 P+E Sbjct: 314 PSE 316 >gi|1709439|sp|P50136|ODBA_MOUSE RecName: Full=2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial; AltName: Full=Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; Short=BCKDE1A; Short=BCKDH E1-alpha; Flags: Precursor gi|992565|gb|AAB38422.1| branched chain alpha ketoacid decarboxylase E1a subunit [Mus musculus] Length = 442 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 90/321 (28%), Positives = 145/321 (45%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L YR M L+ + + G + F G+E VG +L Sbjct: 90 EDPHLPQEEVLKFYRSMTLLNTMDRILYESQREGRIS-FYMTNYGEEGTHVGSAAALERT 148 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ M++ G KG+ +H + F + Sbjct: 149 DLVFGQYREAGVLMYRDYPLELFMSQCYGNVNDPGKGRQMPVHYGCKERHFVTISSPLAT 208 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K +++I + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 209 QIPQAVGAAYAAKRANANRIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 268 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 269 STPTSEQYRGDGIAARGPGYGIKSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 328 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R+ LL+ W E K RK + Sbjct: 329 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVM 388 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P+ L+SD+ Sbjct: 389 EAFEQAERKLKPNPSLLFSDV 409 >gi|284024577|ref|ZP_06378975.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus 132] Length = 330 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 134/306 (43%), Gaps = 3/306 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM +L EGD YR+ + Sbjct: 18 YKWMDLGRKIDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYALEEGDITAPYYRDLVFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ A G++ + S GK H S V Q+ G A A Sbjct: 77 TYMGISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSSPVATQIPHAVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K KI G+G++NQG +E N A + L + VI NN+YA+ S A Sbjct: 137 KMDGKKKIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + I G QVDG D A+ M +A + +G +IE +T R HS D Sbjct: 197 LSDRALGYGIHGEQVDGNDPLAMYKAMKEARDRAISGQGSTLIEAVTSRMTAHSSDDDDQ 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE E D E+ +K LL + L EIE + IIN + + A+ P Sbjct: 257 YRTKEE-RETLKKADCNEKFKKELLSAGIIDDAWLAEIEAEHKDIINKATKAAEDAPYPS 315 Query: 355 PAELYS 360 E Y+ Sbjct: 316 VEEAYA 321 >gi|258510897|ref|YP_003184331.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477623|gb|ACV57942.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 355 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 11/277 (3%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E+ E + L Y M+ R+F+E+A L G +G + GQEA + L Sbjct: 25 ELPENAADLALEWYPFMIFCRKFDERAQLLQRQGRLGTYAPF-RGQEAAQIASFAVLRPS 83 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE ++ G++ + A L R + +HM + + A Sbjct: 84 DWVFPTYRELAGMMYHGLE--PVHALLKSRGHPDAGRMPEEIHMAPPQIA-------IAA 134 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G +A K + D I V FGDGA ++G +E N A++ L V++ +NNQYA+ Sbjct: 135 QILHAVGAGWACKLQEKDDIAVAYFGDGATSEGDFHEGMNFASVMRLPVVFFCQNNQYAI 194 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 V R A +++ +++ + G++VDG D AV M AV R GP +IE +TY Sbjct: 195 SVPVHRQMASPTIAQKAIAYGMEGLRVDGNDAFAVYQAMCYAVERARRGDGPTLIEAVTY 254 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 R H+ + DP YR ++ + DP+ ++R L Sbjct: 255 RLGPHTTADDPGRYRDAVDVERWAAAKDPLVRLRLWL 291 >gi|325972046|ref|YP_004248237.1| pyruvate dehydrogenase (acetyl-transferring) [Spirochaeta sp. Buddy] gi|324027284|gb|ADY14043.1| Pyruvate dehydrogenase (acetyl-transferring) [Spirochaeta sp. Buddy] Length = 817 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 103/374 (27%), Positives = 154/374 (41%), Gaps = 66/374 (17%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-------CHLCIGQEAVIVGM 95 E+ + K++ + AY MLLIR+FE + G+ G HL GQE+ VG Sbjct: 35 ELKLYGKDRLIRAYYDMLLIRKFETMLDTIKKEGVYQGISYNHKGPAHLSAGQESAAVGQ 94 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIM----------------------------- 126 M L DQ+ ++R HG ILA + A + M Sbjct: 95 AMVLEPEDQIFGSHRSHGEILAKSMSAIQKMEDKDLLSIMEGFMQGETYQVIAQHFPGKD 154 Query: 127 --------------AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 AE+ ++ G + G GGSMH F G + IVG ++ G A Sbjct: 155 VRDTAENFILYGALAEIYAKKTGFNAGLGGSMHTFFKPFGSMPNNAIVGGSCTIAVGAAL 214 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAA------LWNLNVIYV-----IENNQYA 221 K R I + GDG+ +G VYE +++ LW N Y +N YA Sbjct: 215 YKKINRKKGIVIANIGDGSLARGPVYEGLVLSSMDQYKTLWEENPGYPPFMLNCFDNLYA 274 Query: 222 M-GTSVSRASAQTNFSKRGVSFNIPGM---QVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 M G + ++ G + N M +VDG + AV + +GP + Sbjct: 275 MGGQPIGETMGYKVAARVGAAINEFSMHTERVDGFNPLAVADATARKKELLIKGEGPAFM 334 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 + LTYRY GHS SD YRT+EE+ R N DPI L+ N S+ DL +++ + Sbjct: 335 DTLTYRYSGHSPSDAMTYRTKEELEAFR-NQDPIVAYGNYLIENGLLSQVDLDTMDVQLE 393 Query: 338 KIINNSVEFAQSDK 351 + + +++ K Sbjct: 394 EKMKRTLQITVDPK 407 >gi|167576733|ref|ZP_02369607.1| pdhA [Burkholderia thailandensis TXDOH] Length = 362 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 87/312 (27%), Positives = 150/312 (48%), Gaps = 14/312 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M+L R F+ KA L G +G F IGQEA+ VG+ ++ D + +YR+H Sbjct: 36 LPLYRAMVLTRAFDTKAVALQRTGKIGTFAS-SIGQEAIGVGVASAMRADDVLFPSYRDH 94 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GV M E GG +G + N +G QV G A+ Sbjct: 95 AAQFLRGV----TMTESLLYWGGDERGSDFAAARLDFPNCV-----PIGTQVCHAAGAAY 145 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A R ++ V GDG ++G YE+ N+A W ++ V+ NNQ+A+ +R +A Sbjct: 146 AFALRGEARVAVAMLGDGGTSKGDFYEAMNLAGAWRAPLVIVVNNNQWAISLPRARQTAA 205 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ I G Q+DG D+ AV+ + +A+ R GP ++E L+YR H+ +D Sbjct: 206 RTLAQKAIAAGIEGRQIDGNDVVAVRQAVGEAIERARGGGGPALVEALSYRLGDHTTADD 265 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 A YR + + + + +P+ ++RK L+ N W D + + ++ +V + Sbjct: 266 ATRYRDADALGK-QWEFEPLLRLRKHLMRRNVWDDARD-EALGKACHAQVDEAVRAYLAV 323 Query: 351 KEPDPAELYSDI 362 +PD + ++ + Sbjct: 324 PQPDTSAMFDHL 335 >gi|242373817|ref|ZP_04819391.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Staphylococcus epidermidis M23864:W1] gi|242348371|gb|EES39973.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Staphylococcus epidermidis M23864:W1] Length = 332 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 93/306 (30%), Positives = 136/306 (44%), Gaps = 3/306 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM ++ EGD YR+ + Sbjct: 18 YKWMDLGRKVDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYAMKEGDISSPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ M G++ I S GK H + G V Q+ G A A Sbjct: 77 TYMGITPLDTMLSAFGKRDDINSGGKQMPSHFSHREKGILSQSSPVATQIPHSVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + I G+G++NQG +E N A + +L I VI NN+YA+ S A N Sbjct: 137 KMDKKQNIATATVGEGSSNQGDFHEGLNFAGVHDLPFICVIINNKYAISVPDSLQYAAEN 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + + G VDG D AV M +A +G +IE +T R HS D Sbjct: 197 LSDRALGYGMHGEHVDGNDPIAVYKAMKEARERALNGEGATLIEAVTSRMTPHSSDDDDK 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE + ++ D + + LL N E L E+E + IIN + + A+ P Sbjct: 257 YRTQEERDSLKEG-DCNLKFKAYLLENNIIDEQWLSELEQEHKDIINKATKTAEEAPYPS 315 Query: 355 PAELYS 360 E Y+ Sbjct: 316 TEEAYA 321 >gi|143377|gb|AAA62681.1| pyruvate decarboxylase (E-1) alpha subunit [Bacillus subtilis subsp. subtilis str. 168] Length = 371 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 93/301 (30%), Positives = 146/301 (48%), Gaps = 19/301 (6%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 54 RRMVFTRVLDQRSISLNRQGRLG-FYAPTAGQEASQIATHFALEKEDFVLPGYRDVPQLI 112 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G+ + S+G M N I+GAQ G+A K Sbjct: 113 WHGLPLYQAFL--------FSRGHFRGNQMPDDVNAL-SPQIIIGAQYIQTAGVALGLKK 163 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R + + GDG +QG YE N A + I+V++NN+YA+ T V + SA + Sbjct: 164 RGKKAVAITYTGDGGRSQGDFYEGINFAGAYKAPAIFVVQNNRYAISTPVEKQSAAETIA 223 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPAN 294 ++ V+ I G+QVDGMD AV A +A +GP +IE LT+RY H+M+ DP Sbjct: 224 QKAVAAGIVGVQVDGMDPLAVYAATAEARERAINGEGPTLIETLTFRYGPHTMAGDDPTK 283 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YRT+E NE DP+ + R L NK W+ E + K IE + ++ I +++ ++D E Sbjct: 284 YRTKEIENEW-EQKDPLVRFRA-FLENKGLWSEEEEAKVIE-DAKEEIKQAIK--KADAE 338 Query: 353 P 353 P Sbjct: 339 P 339 >gi|261419256|ref|YP_003252938.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacillus sp. Y412MC61] gi|319766071|ref|YP_004131572.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacillus sp. Y412MC52] gi|261375713|gb|ACX78456.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. Y412MC61] gi|317110937|gb|ADU93429.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. Y412MC52] Length = 369 Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 90/295 (30%), Positives = 139/295 (47%), Gaps = 18/295 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + EQ R M+ R ++++ L G +G F GQEA + +L + D Sbjct: 39 MPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQIASHFALEKED 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF--YGGHGIVG 161 ++ YR+ I+ G+ + A L R G H G I+G Sbjct: 98 FILPGYRDVPQIIWHGLPLYQ--AFLFSR---------GHFHGNQIPEGVNVLPPQIIIG 146 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 AQ G+A K R + + GDG +QG YE N A + I+V++NN++A Sbjct: 147 AQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFA 206 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T V + + +++ V+ IPG+QVDGMD AV A + A +GP +IE L Sbjct: 207 ISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLC 266 Query: 282 YRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDLKEIE 333 +RY H+MS DP YR++E NE + DP+ + RK L W+ E + + IE Sbjct: 267 FRYGPHTMSGDDPTRYRSKELENEW-AKKDPLVRFRKFLEAKGLWSEEEENRVIE 320 >gi|28493757|ref|NP_787918.1| pyruvate dehydrogenase E1 component alpha subunit [Tropheryma whipplei str. Twist] gi|28572940|ref|NP_789720.1| pyruvate dehydrogenase E1 component, alpha subunit [Tropheryma whipplei TW08/27] gi|28411073|emb|CAD67458.1| pyruvate dehydrogenase E1 component, alpha subunit [Tropheryma whipplei TW08/27] gi|28476799|gb|AAO44887.1| pyruvate dehydrogenase E1 component alpha subunit [Tropheryma whipplei str. Twist] Length = 370 Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 92/295 (31%), Positives = 146/295 (49%), Gaps = 26/295 (8%) Query: 37 PFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 PFL + + Q YR ++L+R+ + +A L G + + + GQEA +G Sbjct: 26 PFLSHAQSLDVEDIQRF--YRDIILVRQIDHEAALLQRRGELALWPPV-YGQEASQIGAT 82 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 + +E D + +YR+H + A G+D I A+L +G S + + + G Sbjct: 83 YACSENDMIFPSYRDHAVMHARGIDLVHI-AKLF---------RGASNNDWDVRQHKVWG 132 Query: 157 HGI-VGAQVSLGTGIAFANKYRRS----------DKICVVCFGDGAANQGQVYESFNIAA 205 + + +GAQV TG A R + +V FGDGA++QG V ES AA Sbjct: 133 YTLCIGAQVLHSTGYAIGIVLERQMSCTDDNSGYPEAVMVWFGDGASSQGDVSESMVFAA 192 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + +++++NNQYA+ S SA KRG F IPG+++DG D+ A A + + + Sbjct: 193 RYQTPQVFMLQNNQYAISVPASVPSAACPLYKRGYGFGIPGIRIDGNDVIAAYAVVREYM 252 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 R+ KGP +IE TYR H+ S DP YR+ +E E + DPI ++ + L Sbjct: 253 DRARSGKGPHLIEAFTYRLGAHTTSDDPTRYRSEDEHREWLAL-DPIIRLERYLF 306 >gi|196011048|ref|XP_002115388.1| hypothetical protein TRIADDRAFT_63370 [Trichoplax adhaerens] gi|190582159|gb|EDV22233.1| hypothetical protein TRIADDRAFT_63370 [Trichoplax adhaerens] Length = 341 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 89/309 (28%), Positives = 145/309 (46%), Gaps = 4/309 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L+ + G + F G+EA G +L D + YRE G + Sbjct: 2 YRQMVLLSTMDRIMYDSQRQGRIS-FYMTNYGEEATHFGSAAALDPHDVVFGQYREAGVL 60 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G M + I KGK +H S F + Q+ +G A+A K Sbjct: 61 LYRGFTLDDFMNQCYANTLDIGKGKQMPVHYGSKALNFVTISSPLATQMPQASGAAYALK 120 Query: 176 YRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 RR D+ CV+C FGDGAA++G + +FN AA + VI+ NN YA+ T S Sbjct: 121 -RRGDRKCVICYFGDGAASEGDAHAAFNFAATLSAPVIFFCRNNGYAISTPTSEQYKGDG 179 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + RG + + ++VDG D+ AV A P+++E +TYR HS SD + Sbjct: 180 IASRGSGYGMAVVRVDGNDLFAVYVATKAARKIAVEENAPVLVEAMTYRVGHHSTSDDWS 239 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR +E++ PI ++R L W ++ E++ R+ + N+++ A+ ++P Sbjct: 240 AYRGADEVSHWDKIDHPIIRLRLFLTKQGWWNDNLESELKKECREGVINAMKKAEKIQKP 299 Query: 354 DPAELYSDI 362 + E+++D+ Sbjct: 300 NLYEVFNDV 308 >gi|329314195|gb|AEB88608.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus T0131] Length = 330 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 133/306 (43%), Gaps = 3/306 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM +L EGD YR+ + Sbjct: 18 YKWMDLGRKIDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYALEEGDITAPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ G++ + S GK H S V Q+ G A A Sbjct: 77 TYMGISTYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSSPVATQIPHAVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K KI G+G++NQG +E N A + L + VI NN+YA+ S A Sbjct: 137 KMDGKKKIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + I G QVDG D A+ M +A + +G +IE +T R HS D Sbjct: 197 LSDRALGYGIHGEQVDGNDPLAMYKAMKEARDRAISGQGSTLIEAVTSRMTAHSSDDDDQ 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE E D E+ +K LL + L EIE + IIN + + A+ P Sbjct: 257 YRTKEE-RETLKKADCNEKFKKELLSAGIIDDAWLAEIEAEHKDIINKATKAAEDAPYPS 315 Query: 355 PAELYS 360 E Y+ Sbjct: 316 VEEAYA 321 >gi|50955932|ref|YP_063220.1| pyruvate dehydrogenase E1 component, alpha subunit [Leifsonia xyli subsp. xyli str. CTCB07] gi|50952414|gb|AAT90115.1| pyruvate dehydrogenase E1 component, alpha subunit [Leifsonia xyli subsp. xyli str. CTCB07] Length = 379 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 88/295 (29%), Positives = 140/295 (47%), Gaps = 29/295 (9%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 +P+LE + +++ + YR M+ +R F+ +A L G +G + GQE VG Sbjct: 33 LPYLERLDENDYRR-----FYRDMVRVRAFDHEAANLQRQGQLGLWV-PSHGQEGAQVGS 86 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTG-RQGGISKGKGG--SMHMFSTKNG 152 + D + +YREH + G+D IM L G GG + H+++ Sbjct: 87 AYAARPQDNIFPSYREHVIGMIRGIDPVGIMGLLRGVTHGGWDPTDPAVENFHLYTL--- 143 Query: 153 FYGGHGIVGAQVSLGTGIAFANKY--------RRSDKICVVCFGDGAANQGQVYESFNIA 204 ++G+ TG A K+ +D+ + FGDGA +QG V E+ A Sbjct: 144 ------VIGSHTLHATGYAMGVKFDGKVGTGNPEADEAVICYFGDGATSQGDVSEALVFA 197 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 A + ++ ++NNQ+A+ V + ++T R F IPG+Q+DG D+ A A K Sbjct: 198 ASYQTPQVFFLQNNQWAISVPV-KTQSRTPLYLRSSGFGIPGVQIDGNDVLAAYAVTAKH 256 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 + R +GP +IE LTYR H+ S DP YRT +E+ + DPI + R L Sbjct: 257 LDDARGGEGPSMIEALTYRMGAHTSSDDPTKYRTDDEVRHW-AERDPILRFRAFL 310 >gi|83716405|ref|YP_438439.1| hypothetical protein BTH_II0237 [Burkholderia thailandensis E264] gi|167614902|ref|ZP_02383537.1| pdhA [Burkholderia thailandensis Bt4] gi|257141487|ref|ZP_05589749.1| hypothetical protein BthaA_20089 [Burkholderia thailandensis E264] gi|83650230|gb|ABC34294.1| pdhA [Burkholderia thailandensis E264] Length = 362 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 87/312 (27%), Positives = 150/312 (48%), Gaps = 14/312 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M+L R F+ KA L G +G F IGQEA+ VG+ ++ D + +YR+H Sbjct: 36 LPLYRAMVLTRAFDTKAVALQRTGKIGTFAS-SIGQEAIGVGVASAMRADDVLFPSYRDH 94 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GV M E GG +G + N +G QV G A+ Sbjct: 95 AAQFLRGV----TMTESLLYWGGDERGSDFAAARLDFPNCV-----PIGTQVCHAAGAAY 145 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A R ++ V GDG ++G YE+ N+A W ++ V+ NNQ+A+ +R +A Sbjct: 146 AFALRGEARVAVAMLGDGGTSKGDFYEAMNLAGAWRAPLVIVVNNNQWAISLPRARQTAA 205 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ I G Q+DG D+ AV+ + +A+ R GP ++E L+YR H+ +D Sbjct: 206 RTLAQKAIAAGIEGRQIDGNDVVAVRQAVGEAIERARGGGGPALVEALSYRLGDHTTADD 265 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 A YR + + + + +P+ ++RK L+ N W D + + ++ +V + Sbjct: 266 ATRYRDADAVGK-QWELEPLLRLRKHLMRRNVWDDARD-EALGKACHAQVDEAVRAYLAV 323 Query: 351 KEPDPAELYSDI 362 +PD + ++ + Sbjct: 324 PQPDTSAMFDHL 335 >gi|284034431|ref|YP_003384362.1| 3-methyl-2-oxobutanoate dehydrogenase [Kribbella flavida DSM 17836] gi|283813724|gb|ADB35563.1| 3-methyl-2-oxobutanoate dehydrogenase (2- methylpropanoyl-transferring) [Kribbella flavida DSM 17836] Length = 372 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 83/308 (26%), Positives = 148/308 (48%), Gaps = 12/308 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y ++ RR ++AG L G + + GQEA + M L D + YR+ I Sbjct: 52 YAQLVTGRRINDQAGALVRQGRLAVYPS-SHGQEACQIAATMVLGAQDWLFPTYRDTVSI 110 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 ++ GVD + LT +G G H + + + Q+ G+A A + Sbjct: 111 VSRGVDP---IETLTLLRGDWHSGYDPYEHKVAPQAT------PLATQLLHAVGVAHAAR 161 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + D + + GDGA ++G +E+ N AA++ V++ I+NN+YA+ +S+ + + Sbjct: 162 LKGEDTVVMALCGDGATSEGDFHEALNFAAVFRAPVVFFIQNNEYAISVPLSKQTVAPSL 221 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 + +G+ + +PG + DG D+ + A + AVA RA +GP ++E TYR + H+ +D A+ Sbjct: 222 AHKGIGYGVPGERADGNDLAGLLAVLGSAVAKARAGEGPQLVEAHTYRVQAHTNADDASK 281 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR E+ DPI+++ L + +E K+ + E + +PD Sbjct: 282 YRDDAEVTPWLER-DPIKRLDAYLTGLGVLDDEAKQEATRAAEKVADALREGLMQEVQPD 340 Query: 355 PAELYSDI 362 PAEL+ + Sbjct: 341 PAELFEHL 348 >gi|148274128|ref|YP_001223689.1| putative 2-keto acid dehydrogenase,dehydrogenase E1 beta component [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147832058|emb|CAN03031.1| putative 2-keto acid dehydrogenase,dehydrogenase E1 beta component [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 370 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 103/327 (31%), Positives = 146/327 (44%), Gaps = 37/327 (11%) Query: 3 VAKQDVTVGDIKMA--LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLML 60 + + DVTV + A L PS SA+ FL FE ++ R M Sbjct: 1 MPESDVTVQLLTPAGELAPSDSAEE------------FLPYFE--RLTEDDHRGFLRDMR 46 Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 L R F+ +A L G +G + GQEA VG + D + AYREHG L G+ Sbjct: 47 LTRAFDLEATNLQRQGHLGLWAP-STGQEAAQVGSGRATRPQDHVFPAYREHGVALIRGI 105 Query: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG----IAF---- 172 D I+ + G G G+ H+++ ++G+Q TG +AF Sbjct: 106 DPVDIVRLMRGVTHGGWDPAAGNFHLYTL---------VIGSQALHATGYAMGVAFDGDV 156 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A D + +GDGA +QG V E+F AA + ++ ++NN +A+ VS S + Sbjct: 157 ATGDPDRDTAVIAYYGDGATSQGDVSEAFVFAASFQTPQVFFLQNNHWAISVPVSTQS-R 215 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-D 291 T R F +P QVDG D+ A A K + R GP IE LTYR H+ S D Sbjct: 216 TPLYLRSRGFGVPSTQVDGNDVFASYAVTAKHLDDARNGDGPSFIEALTYRVGAHTSSDD 275 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRL 318 P YRT EE+ + DPI ++ L Sbjct: 276 PTKYRTEEELQGWVAK-DPIARLEAYL 301 >gi|323358109|ref|YP_004224505.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Microbacterium testaceum StLB037] gi|323274480|dbj|BAJ74625.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Microbacterium testaceum StLB037] Length = 376 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 90/295 (30%), Positives = 141/295 (47%), Gaps = 29/295 (9%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 +P ++ +E + YR M+ IR F+ +A L G + GQEA VG Sbjct: 29 LPLIDALTDAELE-----TFYRDMVSIRAFDVQATNLQRQGQLA-LWPPSFGQEAAQVGS 82 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG---ISKGKGGSMHMFSTKNG 152 + D + +YREH GVD I+ + G G + K G+ H+++ Sbjct: 83 ARAARAQDHIFPSYREHVVTRIRGVDPLDIIRLMRGLTHGGWDPTDPKNGNTHIYTL--- 139 Query: 153 FYGGHGIVGAQVSLGTGIAFANKY--------RRSDKICVVCFGDGAANQGQVYESFNIA 204 ++GAQ TG+A + D+ +V +GDGA++QG V+E+ A Sbjct: 140 ------VLGAQTLHATGLAMGLVFDGKSGSGDPERDEAVIVYYGDGASSQGDVHEAMVFA 193 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 A + ++ ++NNQ+A+ V+ S ++ KRG + IP +QVDG D+ A A A Sbjct: 194 ASFQTPEVFFLQNNQWAISVPVATQS-RSPLYKRGEGYGIPSLQVDGNDVLASYAVSKVA 252 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 + RA GP IE +TYR H+ S DP YRT +E + + DPI ++R L Sbjct: 253 LDEARAGGGPRAIEAMTYRMGAHTTSDDPTKYRTSDE-EKAWAERDPIARMRAYL 306 >gi|7546384|pdb|1DTW|A Chain A, Human Branched-Chain Alpha-Keto Acid Dehydrogenase gi|34810147|pdb|1OLS|A Chain A, Roles Of His291-Alpha And His146-Beta' In The Reductive Acylation Reaction Catalyzed By Human Branched-Chain Alpha-Ketoacid Dehydrogenase gi|34810151|pdb|1OLX|A Chain A, Roles Of His291-Alpha And His146-Beta' In The Reductive Acylation Reaction Catalyzed By Human Branched-Chain Alpha- Ketoacid Dehydrogenase gi|56966209|pdb|1U5B|A Chain A, Crystal Structure Of The Human Mitochondrial Branched-Chain Alpha-Ketoacid Dehydrogenase gi|90108470|pdb|1WCI|A Chain A, Reactivity Modulation Of Human Branched-Chain Alpha- Ketoacid Dehydrogenase By An Internal Molecular Switch gi|90108844|pdb|2BEU|A Chain A, Reactivity Modulation Of Human Branched-Chain Alpha- Ketoacid Dehydrogenase By An Internal Molecular Switch gi|90108847|pdb|2BEV|A Chain A, Reactivity Modulation Of Human Branched-Chain Alpha- Ketoacid Dehydrogenase By An Internal Molecular Switch gi|90108850|pdb|2BEW|A Chain A, Reactivity Modulation Of Human Branched-Chain Alpha- Ketoacid Dehydrogenase By An Internal Molecular Switch Length = 400 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 143/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 106 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 107 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 167 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 227 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R LL W E K R+ + Sbjct: 287 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 346 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 347 EAFEQAERKPKPNPNLLFSDV 367 >gi|297584543|ref|YP_003700323.1| 3-methyl-2-oxobutanoate dehydrogenase [Bacillus selenitireducens MLS10] gi|297143000|gb|ADH99757.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Bacillus selenitireducens MLS10] Length = 331 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 96/322 (29%), Positives = 150/322 (46%), Gaps = 7/322 (2%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E + +K+ L + ML R +E+ L G + F C GQEA VG M+L Sbjct: 7 EQAGLSKDDVLKMFETMLEARMIDERMWLLNRAGKIP-FVISCQGQEAAQVGASMALDRD 65 Query: 103 -DQMITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D ++ YR+ G +L G+ A IM + + S G+ H KN G V Sbjct: 66 VDYVLPYYRDLGVVLHFGMTARDIMMSAFAKPEDPNSGGRQMPGHFGQKKNRIVTGSSPV 125 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 QV GIA A K + + + FG+G++NQG +E N A++ +L VI+++ENN+Y Sbjct: 126 TTQVPHAVGIALAAKMQGDELVAFTTFGEGSSNQGDFHEGINFASVHDLPVIFMVENNKY 185 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ + S R ++ I G VDG D AV + A + +GP +IE + Sbjct: 186 AISVPQEKQLNVEKVSDRAKAYGIHGETVDGNDPVAVYQAVKNARERALSGEGPSLIETV 245 Query: 281 TYRYRGHSM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +YR HS D + YR++ E+ ++ D I + L N E EI +R++ Sbjct: 246 SYRLTPHSSDDDDSTYRSKAEVEAAKAI-DSIHTFGEYLRANGLMDEETEAEIRGKLRRM 304 Query: 340 INNSVEFAQSDK--EPDPAELY 359 IN + + A+ PD E + Sbjct: 305 INQATDEAEEAPFASPDTLEQF 326 >gi|284043651|ref|YP_003393991.1| 3-methyl-2-oxobutanoate dehydrogenase (2- methylpropanoyl-transferring) [Conexibacter woesei DSM 14684] gi|283947872|gb|ADB50616.1| 3-methyl-2-oxobutanoate dehydrogenase (2- methylpropanoyl-transferring) [Conexibacter woesei DSM 14684] Length = 356 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 14/268 (5%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 EV+ EQ L +R ++L+R F+E+A G +G + + G EA+ VG +L Sbjct: 22 EVAGLADEQLLELHRQLVLMRTFDERAVVYQRQGRIGTYA-IYWGHEAIQVGAHFALDAA 80 Query: 103 -DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI-V 160 D + +YRE L G+D + ++A G G ++ + GG + + Sbjct: 81 TDWVFPSYRESAIGLLRGIDPATVLAWWRGHPAG----------WWNPQEHLLGGISVPI 130 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 +QV G A+ + R +V FGDGA ++G +E N+AA+ + V+ + NN + Sbjct: 131 ASQVPHAAGAAWGMRLRGEPGCALVFFGDGATSEGAFHEGVNLAAVTDAPVVLLCSNNGW 190 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ T R S + + V + IPG++VDG D+ AV + AV RA GP ++E + Sbjct: 191 AISTPYERQSRAAALADKAVGYGIPGVRVDGGDVLAVHEAVRDAVTRARAGDGPTLVEAV 250 Query: 281 TYRYRGH-SMSDPANYRTREEINEMRSN 307 YR H + DP+ YR RS+ Sbjct: 251 HYRIAPHGTADDPSLYREPGRAEAARSD 278 >gi|47196273|emb|CAF88112.1| unnamed protein product [Tetraodon nigroviridis] Length = 349 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 83/317 (26%), Positives = 142/317 (44%), Gaps = 2/317 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE L+ Y+ M L+ + + G + F G+E +G +L D + Sbjct: 1 LSKETVLNFYQKMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHIGSASALDPNDLVF 59 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YRE G ++ G MA+ + KG+ +H F + Q+ Sbjct: 60 GQYREAGVLMYRGFPLDLFMAQCYANADDLGKGRQMPVHYGCRDLNFVTISSPLATQIPQ 119 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A+A K + ++ + FG+GAA++G + FN +A +I+ NN YA+ T Sbjct: 120 AVGAAYAFKRQNMNRAVICYFGEGAASEGDAHAGFNFSATLECPLIFFCRNNGYAISTPT 179 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + + RG + + ++VDG D+ AV +A A P +IE +TYR Sbjct: 180 NEQYRGDGIAARGPGYGMLSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGH 239 Query: 287 HSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HS SD ++ YR+ +E+N PI ++R + W SE D + RK + + E Sbjct: 240 HSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYMTARGWWSEDDERSWRKQSRKTVMEAFE 299 Query: 346 FAQSDKEPDPAELYSDI 362 A+ +P+P L++D+ Sbjct: 300 KAEKRLKPNPELLFTDV 316 >gi|307718515|ref|YP_003874047.1| dehydrogenase, fusion [Spirochaeta thermophila DSM 6192] gi|306532240|gb|ADN01774.1| putative dehydrogenase, fusion [Spirochaeta thermophila DSM 6192] Length = 818 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 103/396 (26%), Positives = 169/396 (42%), Gaps = 69/396 (17%) Query: 24 KRAATSSVDCVDIPFLEG---FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 ++ AT +D + + G E++ + KE+ L Y M IR FE + G G Sbjct: 13 RKRATLKIDPIPLNRYRGNADEELARYGKERLLRIYYDMRTIREFESMLDAIKKQGAWEG 72 Query: 81 F-------CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA------CGVDASKI-- 125 HL IGQEA VG ++L D + ++R HG ILA +D ++ Sbjct: 73 IKYDHKGPAHLSIGQEAAAVGQALNLDVEDFIFGSHRSHGEILAKCYSAIWKLDEHRLRE 132 Query: 126 ----------------------------------MAELTGRQGGISKGKGGSMHMFSTKN 151 +AE+ R+ G ++G GGSMH F Sbjct: 133 VMEGYLDGEILAVVDRIPHTDVKDLAENFVLYGTLAEIFARKTGFNRGLGGSMHAFFVPF 192 Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA------ 205 G + IVG + G A + R I + GDG+ G V+E+ +A+ Sbjct: 193 GVMPNNAIVGGSADIAVGAALYKRINRRPGIVIANIGDGSTGCGPVWEAMMLASMDQYRR 252 Query: 206 LWNLNV------IYVIENNQYAM-GTSVSRASAQTNFSKRGVSFNIPGM---QVDGMDIR 255 LW + ++ NN YAM G ++ ++ G N M +VDG + Sbjct: 253 LWPEEIGGAPPMLFNFFNNFYAMGGQTLGETMGYQVLARIGAGVNPENMHAERVDGYNPL 312 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVR 315 AV + + A +GP++++ +TYR+ GHS SD ++YRT +E+ DP++ Sbjct: 313 AVADAIARKKELLLAGRGPVLLDTVTYRFSGHSPSDASSYRTEDEVKRW-EKVDPLKGYA 371 Query: 316 KRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 L+ + A+ DL+E++ VR+ + V+ A D+ Sbjct: 372 DYLVKHGIAAPEDLRELDERVRQKLIPVVKLATDDE 407 >gi|256847325|ref|ZP_05552771.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Lactobacillus coleohominis 101-4-CHN] gi|256715989|gb|EEU30964.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Lactobacillus coleohominis 101-4-CHN] Length = 363 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 88/322 (27%), Positives = 149/322 (46%), Gaps = 17/322 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S+ +Q + ++ M+ R +++ +L G +G F G+EA + ++T+ D Sbjct: 33 MSDLTDDQLVDLFKQMIWSRIVDDRTTKLNRQGRLGFFAPTA-GEEASQMASNYAMTKDD 91 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ +K G G + + I+GAQ Sbjct: 92 YLLGGYRDVPELVKHGLPLAKAFMWSKGMVNG---------NKYEADLNAMPPQIIIGAQ 142 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K + S GDG +QG YE N A + +++++NN YA+ Sbjct: 143 YVQTAGVALGLKKKGSKAFAYTYTGDGGTSQGDFYEGMNFAGAFKAPALFIVQNNLYAIS 202 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 +A +++ V+ IPG+ VDGMD AV +A Y A GP+++E LTYR Sbjct: 203 VPRELQTAAPVLAQKAVAVGIPGVVVDGMDALAVYTAAKQARDYIVAGNGPVMLETLTYR 262 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 Y H++S DP YRT+EE + + DP+ ++RK L SE E E K + Sbjct: 263 YGPHTLSGDDPKRYRTKEEEDAWHAK-DPLTRMRKFLTAKGIWSE----EQETAYEKEVE 317 Query: 342 NSVEFAQSDKEPDPAELYSDIL 363 ++ A + E PAE ++ L Sbjct: 318 AEIDDAIHEVESQPAESVTEYL 339 >gi|117618054|ref|YP_857371.1| pyruvate dehydrogenase E1 component, alpha subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559461|gb|ABK36409.1| pyruvate dehydrogenase E1 component, alpha subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 363 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 97/356 (27%), Positives = 160/356 (44%), Gaps = 45/356 (12%) Query: 34 VDIPFL-----EGFEVSEF----NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-CH 83 VDIPFL EG V+ +K + YR M+++R +++KA L G +G F H Sbjct: 4 VDIPFLRYLDEEGRPVATLPTWLDKAILHTFYRNMVMVRSYDKKAIALQRTGKLGTFPSH 63 Query: 84 LCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGS 143 L G EAV +G+ +++ D + YR+ + GV K + G + G Sbjct: 64 L--GAEAVGIGVGLAMQPQDVYVPYYRDMPTLYVRGVPMEKNLQYWGGDERG-------- 113 Query: 144 MHMFSTKNGFYGGHG----------IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 + FY G + Q++ GIA A K R ++ VV GDG + Sbjct: 114 -------SVFYKADGELSEDLPICVPIATQITHAAGIAAAFKLRNQPRVAVVTIGDGGTS 166 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 +G E N A +W+L ++ +I NNQ+A+ S+ +++G+ + +QVDG D Sbjct: 167 KGDFLEGLNCAGVWHLPMVMIINNNQWAISVPRKLQSSAPTLAQKGIGAGVRSIQVDGND 226 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 + AV AV R+ KGP +IE ++YR H+ +D A E +P+++ Sbjct: 227 VVAVYEATRSAVERARSGKGPTLIEAVSYRLGDHTTADDATRYREAAEVEAAWAKEPVKR 286 Query: 314 VRKRLLHNKWASEGD--------LKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 +R+ + W E +E+E V N +V+ ++ + AEL D Sbjct: 287 LRQFMFEQGWWDEQQEQALLAEAAREVERAVAVYENTAVQAPETLLDYQFAELPKD 342 >gi|148727347|ref|NP_001092034.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial precursor [Pan troglodytes] gi|156633665|sp|A5A6H9|ODBA_PANTR RecName: Full=2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial; AltName: Full=Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; Short=BCKDE1A; Short=BCKDH E1-alpha; Flags: Precursor gi|146741392|dbj|BAF62352.1| branched chain keto acid dehydrogenase E1, alpha polypeptide [Pan troglodytes verus] Length = 445 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 143/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 93 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 151 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 152 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 211 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 212 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 271 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 272 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 331 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N P+ ++R LL W E K RK + Sbjct: 332 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPVSRLRHYLLSQGWWDEEQEKAWRKQSRKKVM 391 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 392 EAFEQAERKPKPNPNLLFSDV 412 >gi|284045852|ref|YP_003396192.1| pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] gi|283950073|gb|ADB52817.1| Pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] Length = 337 Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 85/273 (31%), Positives = 135/273 (49%), Gaps = 3/273 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++E ++ R M+L+R EE+ LY G + G + GQEA+ VG +L+ D + Sbjct: 2 LHEEDRIALLRHMVLMRTIEEQGISLYKKGKIPGSFYDGRGQEAISVGATFALSPQDPVC 61 Query: 107 TAY-REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + R+ G L GVD + + GR+ ISKG+ G++H + G G ++ + Sbjct: 62 SPLIRDLGAHLVRGVDLADLFRHYMGRENPISKGREGNIHFGDRRLGVVGPVSMLPDMMV 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + TG+A A + R + + FGDGA ++G +E+ N AA+ L V++++E+NQ A TS Sbjct: 122 VATGLAMAFQMRDERRCSLSFFGDGATSRGDWHEAMNWAAVERLPVVFMLEDNQLAYSTS 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R A + R ++ + + +DG D+ AV A +A A GP +I T R Sbjct: 182 QERQFA-VHPVVRAEAYGVHAVAIDGNDVEAVFAATHEARARALRGDGPTLISATTMRMH 240 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 GH D A Y E+ DPI RL Sbjct: 241 GHGAHDDARY-VDAELLAAWGARDPIAGYTARL 272 >gi|189055345|dbj|BAG36106.1| unnamed protein product [Homo sapiens] Length = 445 Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 143/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 93 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 151 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 152 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 211 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 212 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 271 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 272 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 331 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R LL W E K R+ + Sbjct: 332 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEKQEKAWRKQSRRKVM 391 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 392 EAFEQAERKPKPNPNLLFSDV 412 >gi|330830331|ref|YP_004393283.1| pyruvate dehydrogenase E1 component subunit alpha [Aeromonas veronii B565] gi|328805467|gb|AEB50666.1| Pyruvate dehydrogenase E1 component, alpha subunit [Aeromonas veronii B565] Length = 378 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 99/344 (28%), Positives = 159/344 (46%), Gaps = 30/344 (8%) Query: 34 VDIPFL-----EGFEVSEF----NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-CH 83 VDIPFL EG V+ +K + YR M+++R +++KA L G +G F H Sbjct: 20 VDIPFLRYLDAEGCPVATLPTWLDKAILHTFYRNMVMVRSYDKKAIALQRTGKLGTFPSH 79 Query: 84 LCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG--ISKGKG 141 L G EAV +G+ +++ D + YR+ + GV K + G + G K G Sbjct: 80 L--GAEAVGIGIGLAMQPQDVYVPYYRDMPTLYVRGVPMEKNLQYWGGDERGSYFLKPDG 137 Query: 142 GSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF 201 + Q++ GIA A K R ++ VV GDG ++G E Sbjct: 138 TPSEDLPICVP-------IATQITHACGIASAFKLRNQPRVAVVTIGDGGTSKGDFLEGL 190 Query: 202 NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 N A +W+L ++ ++ NNQ+A+ S+ +++G+ + +QVDG D+ AV Sbjct: 191 NCAGVWHLPMVIIVNNNQWAISVPRKLQSSAPTLAQKGIGAGVRSLQVDGNDVVAVYDAA 250 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLH 320 AV R+ KGP +IE ++YR H+ +D A YR E+ E +P++++R+ + Sbjct: 251 RSAVERARSGKGPTLIEAVSYRLGDHTTADDATRYRDGAEV-EAAWAKEPVKRLRQFMHS 309 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDKE---PDPAELYSD 361 W E E E ++ VE A + E P P E D Sbjct: 310 QGWWDE----EQEQSLLAEATREVEQAVARYEVMAPQPPEAMLD 349 >gi|318062344|ref|ZP_07981065.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces sp. SA3_actG] gi|318080326|ref|ZP_07987658.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces sp. SA3_actF] Length = 413 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 82/308 (26%), Positives = 147/308 (47%), Gaps = 26/308 (8%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR+ +A L G + + GQEA + + L + D + +YR+ ++A GVD Sbjct: 82 RRYNAQATALTRQGRLAVYPS-TTGQEAAEIAAALVLQDQDWLFPSYRDTLAVVARGVDP 140 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 + + L G + + ST + H + G+A A + R D + Sbjct: 141 LETLTLLRGDKHTGYDPHATRVAPLSTPLATHLPHAV---------GLAHAARLRGDDVV 191 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 + GDG ++G +E+ N AA+W V+++++NN YA+ + + +A + + + V + Sbjct: 192 ALAMCGDGGTSEGDFHEALNFAAVWQAPVVFLVQNNGYAISVPLDKQTAAPSLAHKAVGY 251 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEI 301 +PG VDG D+ A+ + +AV R GP ++E +TYR H+ +D A YR EE+ Sbjct: 252 GMPGRLVDGNDVLALHEVLGEAVLRARTGGGPTLVEAVTYRLDAHTNADDATRYREAEEV 311 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA-------QSDKEPD 354 R+ HDP+ + + L + G L E ++ + + EFA +D +P Sbjct: 312 EVWRA-HDPVRLLEREL-----LALGILDEDAIDAER--ERAEEFAAGLRARLNADADPH 363 Query: 355 PAELYSDI 362 P EL++ + Sbjct: 364 PEELFAHV 371 >gi|239826457|ref|YP_002949081.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacillus sp. WCH70] gi|239806750|gb|ACS23815.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. WCH70] Length = 371 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 90/289 (31%), Positives = 136/289 (47%), Gaps = 20/289 (6%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 54 RRMVYTRVLDQRSISLNRQGRLG-FYAPTAGQEASQIASHFALEKEDFILPGYRDVPQLI 112 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF--YGGHGIVGAQVSLGTGIAFAN 174 G+ + A L R G H G I+GAQ G+A Sbjct: 113 WHGLPLYQ--AFLFSR---------GHFHGNQIPEGVNALPPQIIIGAQYIQAAGVALGL 161 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K R + + GDG +QG YE N A + I+V++NN++A+ T V + + Sbjct: 162 KKRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKT 221 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DP 292 +++ V+ IPG+QVDGMD AV + A +GP +IE L +RY H+MS DP Sbjct: 222 LAQKAVAAGIPGIQVDGMDPLAVYVAVRAARERAINGEGPTLIETLCFRYGPHTMSGDDP 281 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKI 339 YRT+E NE DP+ + RK L NK W+ E + K IE +I Sbjct: 282 TRYRTKELENEWEKK-DPLVRFRK-FLENKGLWSEEEENKVIEQAKEEI 328 >gi|322710834|gb|EFZ02408.1| 2-oxoisovalerate dehydrogenase alpha subunit [Metarhizium anisopliae ARSEF 23] Length = 450 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 8/290 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+EAV VG L D + YRE G G+ + M++L + KG+ Sbjct: 121 FYMVSAGEEAVSVGSSSVLDPEDPVYCQYREQGFFKERGMTTKEFMSQLFANKNDPGKGR 180 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQ 194 +H S + + + Q+ +G +A K ++ K+ V FG+GAA++ Sbjct: 181 NMPVHYGSKRLNIHTVSSPLATQIPQASGAGYALKMQKLQDPNSKAKVAVCFFGEGAASE 240 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + VI++ NN YA+ T + RG+ + I +++DG DI Sbjct: 241 GDFHAAMNIAATRSCPVIFICRNNGYAISTPTLDQYRGDGIASRGIGYGIDTIRIDGNDI 300 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV+ + KA G PI+IE +TYR HS SD + YR R E+ + + +PI Sbjct: 301 WAVREAVKKAREMALQDGGKPILIECMTYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIT 360 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++RK + E KE ++RK I A+ +K+P ++ D+ Sbjct: 361 RLRKWMEAKGCWDETKEKEARDSLRKEILKGFSEAEKEKKPALRTMFEDV 410 >gi|108800592|ref|YP_640789.1| pyruvate dehydrogenase (lipoamide) [Mycobacterium sp. MCS] gi|119869731|ref|YP_939683.1| pyruvate dehydrogenase (acetyl-transferring) [Mycobacterium sp. KMS] gi|126436208|ref|YP_001071899.1| pyruvate dehydrogenase (acetyl-transferring) [Mycobacterium sp. JLS] gi|108771011|gb|ABG09733.1| Pyruvate dehydrogenase (lipoamide) [Mycobacterium sp. MCS] gi|119695820|gb|ABL92893.1| Pyruvate dehydrogenase (acetyl-transferring) [Mycobacterium sp. KMS] gi|126236008|gb|ABN99408.1| Pyruvate dehydrogenase (acetyl-transferring) [Mycobacterium sp. JLS] Length = 356 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 82/264 (31%), Positives = 130/264 (49%), Gaps = 12/264 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M++ R + + L G + + C GQEA +G L + D + YRE G Sbjct: 37 YETMVVTRDLDTEFVHLQRQGELALYAS-CRGQEAAQIGATACLRKTDWLFPQYREIGAF 95 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G+ +++ A G+ G + S G G H + G A A + Sbjct: 96 LLRGIAPAQMAAVWRGKWHGGLEFTAKCCAPISIPIGTQGLHAV---------GAAMAAQ 146 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 D + V GDGA ++G V+E+ N+AA++ + ++ ++NNQ+A+ V R A + Sbjct: 147 RLGEDSVTVAFLGDGATSEGDVHEAMNLAAVYQVPCVFFVQNNQWAISVPVQRQVAGPSI 206 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + R + +PG++VDG D+ A A M +A A RA GP +IE +TYR H+ S DP Sbjct: 207 AHRAAGYGMPGVRVDGNDVLACFAVMSEAAARARAGGGPTLIEAVTYRLGPHTTSDDPTR 266 Query: 295 YRTREEINEMRSNHDPIEQVRKRL 318 YR + E++ R+ DPI + R L Sbjct: 267 YRDQSEVDRWRAR-DPIPRYRTYL 289 >gi|8176547|gb|AAB20222.2| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Homo sapiens] Length = 443 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 143/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 91 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 149 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 150 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 209 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 210 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 269 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 270 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 329 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R LL W E K R+ + Sbjct: 330 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 389 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 390 EAFEQAERKPKPNPNLLFSDV 410 >gi|333025677|ref|ZP_08453741.1| putative 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) E1-alpha chain [Streptomyces sp. Tu6071] gi|332745529|gb|EGJ75970.1| putative 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) E1-alpha chain [Streptomyces sp. Tu6071] Length = 416 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 82/308 (26%), Positives = 147/308 (47%), Gaps = 26/308 (8%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR+ +A L G + + GQEA + + L + D + +YR+ ++A GVD Sbjct: 85 RRYNAQATALTRQGRLAVYPS-TTGQEAAEIAAALVLQDQDWLFPSYRDTLAVVARGVDP 143 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 + + L G + + ST + H + G+A A + R D + Sbjct: 144 LETLTLLRGDKHTGYDPHATRVAPLSTPLATHLPHAV---------GLAHAARLRGDDVV 194 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 + GDG ++G +E+ N AA+W V+++++NN YA+ + + +A + + + V + Sbjct: 195 ALAMCGDGGTSEGDFHEALNFAAVWQAPVVFLVQNNGYAISVPLDKQTAAPSLAHKAVGY 254 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEI 301 +PG VDG D+ A+ + +AV R GP ++E +TYR H+ +D A YR EE+ Sbjct: 255 GMPGRLVDGNDVLALHEVLGEAVLRARTGGGPTLVEAVTYRLDAHTNADDATRYREAEEV 314 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA-------QSDKEPD 354 R+ HDP+ + + L + G L E ++ + + EFA +D +P Sbjct: 315 EVWRA-HDPVRLLEREL-----LALGILDEDAIDAER--ERAEEFAAGLRARLNADADPH 366 Query: 355 PAELYSDI 362 P EL++ + Sbjct: 367 PEELFAHV 374 >gi|291224169|ref|XP_002732080.1| PREDICTED: branched chain keto acid dehydrogenase E1, alpha polypeptide-like [Saccoglossus kowalevskii] Length = 455 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 89/284 (31%), Positives = 144/284 (50%), Gaps = 17/284 (5%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EA+ +G +L D++ YRE G ++ G + + G + G +G+ Sbjct: 146 GEEAIHIGSAAALDNEDEVYGQYREQGVLMWRGYTLDEFVDLCLGNEYGHGRGRTNPTLY 205 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAA 205 S + + + ++ G A+A K R K CVVCF GDGAA++G + FN A+ Sbjct: 206 GSKELHYITLSAPLSTEMPQAAGYAYALK-RSGSKNCVVCFFGDGAASEGDAHAGFNFAS 264 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS--FNIPGMQVDGMDI----RAVKA 259 + VIY+ NN YA+ T + Q + G++ + I ++VDG D+ A+KA Sbjct: 265 TLEVPVIYICRNNGYAIST---HSYEQYHGDGIGMASGYGICAIRVDGNDMLAVYNAIKA 321 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 D A++ R P+I+E +TYR HS S DP YRT EE H PI++ RK + Sbjct: 322 ARDIALSESR----PVIVEAMTYRLGHHSTSDDPTTYRTDEEA-AYWGRHHPIDRCRKFI 376 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 W S+ + K R++I NS++ A+ P+P E+++D+ Sbjct: 377 TKKGWWSDEEEKTWYKETRQMIINSMDRAEKKLLPNPHEIFTDV 420 >gi|288919961|ref|ZP_06414282.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Frankia sp. EUN1f] gi|288348614|gb|EFC82870.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Frankia sp. EUN1f] Length = 355 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 82/276 (29%), Positives = 133/276 (48%), Gaps = 13/276 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V+E + + R M ++RR +++ L G + + L GQEA VG +L D Sbjct: 25 VAEVTDDDLVGLLRDMTVVRRLDDEGTALQRQGELSLWASLR-GQEAAQVGSGRALEPAD 83 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +YREHG GVD K+ G G ++GF +VG+Q Sbjct: 84 MAFPSYREHGVAWCRGVDPLKLFGLFRGTSLGAWD---------PAEHGFALYAIVVGSQ 134 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A + + FGDGA+++G V E+F A+++ +++ +NNQ+A+ Sbjct: 135 TLHATGYAMGVARDGGEGAVISYFGDGASSEGDVNEAFGWASVFGAPLVFFCQNNQWAIS 194 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 R S + +R F P ++VDG D+ A A A+ R+ GP+++E LTYR Sbjct: 195 EPYRRQS-RVPIYQRARGFGFPSVRVDGNDVLATLAVTRWALRQARSGAGPVLVEALTYR 253 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ + DP+ YR +E++ R DPI+++R L Sbjct: 254 INPHTTADDPSRYRPADELSTWR-RRDPIDRLRTHL 288 >gi|302895885|ref|XP_003046823.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256727750|gb|EEU41110.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 449 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 8/290 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+EAV +G L D M YRE G G A + M +L + +G+ Sbjct: 120 FYMVSAGEEAVSIGSSSVLDREDVMFCQYREQGVFKERGWTAKEFMGQLFANKRDPGRGR 179 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQ 194 +H S + + + Q+ +G A+A K +R ++ FG+GAA++ Sbjct: 180 SMPVHYGSKELNIHSISSPLATQLPQASGAAYALKMQRLQDPNVKPRVVAAFFGEGAASE 239 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + VI++ NN YA+ T + RG+ + I +++DG DI Sbjct: 240 GDFHAALNIAATRSCPVIFICRNNGYAISTPTLDQYRGDGIASRGIGYGIDTIRIDGNDI 299 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV+ KA G P++IE +TYR HS SD + YR R E+ + + +PI Sbjct: 300 WAVREATKKAREMALQDGGKPVLIEAMTYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIT 359 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++RK + E KE ++RK I + A+ +K+P ++ D+ Sbjct: 360 RLRKWMEAKGIWDETKEKEARDSLRKEILKAFSEAEREKKPPIRAMFEDV 409 >gi|94501862|ref|ZP_01308373.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Oceanobacter sp. RED65] gi|94425995|gb|EAT10992.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Oceanobacter sp. RED65] Length = 371 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/305 (27%), Positives = 147/305 (48%), Gaps = 13/305 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M++ R F++KA L G +G + +GQEA + ++L D + YR+HG + Sbjct: 50 YKHMVMTRVFDQKAIALQRTGQMGTYPS-SLGQEAFATAIGIALQNEDVFVPYYRDHGTL 108 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G D S I+A G + G + G + + + Q++ G A A K Sbjct: 109 LMRGYDMSDILAYWGGDERGSTTGPKQDLPLCVP----------IATQITHAAGAAAALK 158 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + D + + GDG ++G +ES N+A W L +I V+ NNQYA+ Sbjct: 159 IKAQDNLVITTIGDGGTSKGDFFESLNVAGAWQLPLIVVVNNNQYAISVPREIQCGAKTL 218 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 +++ + I G+QVDG D A+ + +A + HKG +IE +TYR H+ +D A Sbjct: 219 AQKAIGAGIHGVQVDGNDPMALYQALLEARQRIQQHKGATLIEAVTYRLGDHTTADDATR 278 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR+ +E+ E DP+++++ L E ++ + K ++ +V+ + + Sbjct: 279 YRSNDEVKEAWLK-DPVKRLQSLLASLNLWDEQREQDWQKQCAKSVDAAVKRYLAREPQQ 337 Query: 355 PAELY 359 PA ++ Sbjct: 338 PAAMF 342 >gi|119960518|ref|YP_948259.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Arthrobacter aurescens TC1] gi|119947377|gb|ABM06288.1| putative pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Arthrobacter aurescens TC1] Length = 356 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 87/284 (30%), Positives = 134/284 (47%), Gaps = 16/284 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 Y LM +R + A G++ G+ +GQEA VG ++ D + YRE G Sbjct: 32 YTLMAAVRHLDTSAVAWQRQGIIPGYA-PELGQEAAQVGSGYAVDRTRDFVFPTYREMGV 90 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA--- 171 A G+D M+ + GG + ++ F +V V G A Sbjct: 91 ARAMGLDMVGYMSTHK------ATWHGGMYNPLESR--FAPIQAVVAGSVLHAVGWAHGQ 142 Query: 172 -FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 + + + FGDGA++QG V+E+ N AA+ V++ I+NN +A+ R Sbjct: 143 TLSGHAAGETGVAMTYFGDGASSQGDVHEAMNFAAVMKAPVVFFIQNNGWAISVPTERQV 202 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A + + R + IP +QVDG D+ AV A A+CRA GP++IE +TYR HS + Sbjct: 203 AGGSVAARAAGYGIPALQVDGNDVVAVFEATRSAFAHCRAGNGPVVIEAMTYRRGPHSTA 262 Query: 291 -DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 DP YRT +E + + DP+E+ ++RLL A E E + Sbjct: 263 DDPGRYRTLDE-ERLDAGEDPLERFKQRLLAEGIADEAFFTEAQ 305 >gi|284045848|ref|YP_003396188.1| pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] gi|283950069|gb|ADB52813.1| Pyruvate dehydrogenase (acetyl-transferring) [Conexibacter woesei DSM 14684] Length = 330 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 87/316 (27%), Positives = 152/316 (48%), Gaps = 16/316 (5%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 + A R M L R +E+A L G +G F + GQEA +VG ++L D ++ YRE Sbjct: 7 IDALRWMRLARAVDERAISLQRQGRLGTFSPVT-GQEAAVVGSALALDPARDWVVPQYRE 65 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 +L G + L G G + + + + + AQ+ GIA Sbjct: 66 LPAMLRQGYPLAHFFLYLQGHPQGSAIPR--DVRVLPMQIAL-------AAQLPHAVGIA 116 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + + + + + + GDGA+++G +E+ N+A + ++ V++NN +A+ T SR +A Sbjct: 117 WGMRLQGENGVVMTYIGDGASSEGDFHETCNLAGVLRAPLVVVLQNNGWAISTPRSRQTA 176 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS- 290 F+ R V + G+ VDG D+ A + +AVA R GP I+E +TYR H+ + Sbjct: 177 AETFASRAVGYGCAGVVVDGNDVEATREAAGEAVARARDGGGPTILEAVTYRTGPHTTAD 236 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINNSVEFAQ 348 DP Y E + + R DPIEQ L + W+ E D E+ ++ + I+ + A+ Sbjct: 237 DPTRYVDPEVLAQWR-ERDPIEQALATLRGRRRAWSDERD-AEMVASITEQIDAAWATAE 294 Query: 349 SDKEPDPAELYSDILI 364 + P ++ ++ + Sbjct: 295 ATPRPTSDAMFDNVFV 310 >gi|386841|gb|AAB59549.1| branched-chain alpha-keto acid dehydrogenase [Homo sapiens] Length = 444 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 143/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 92 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 150 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 151 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 210 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 211 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 270 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 271 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 330 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R LL W E K R+ + Sbjct: 331 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 390 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 391 EAFEQAERKPKPNPNLLFSDV 411 >gi|320009796|gb|ADW04646.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces flavogriseus ATCC 33331] Length = 387 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 82/334 (24%), Positives = 154/334 (46%), Gaps = 18/334 (5%) Query: 36 IPFLEGFEV------SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQE 89 +P E F V ++ + E L Y ++ RR+ +A L G + + GQE Sbjct: 30 LPDPEPFRVLGTDAAADADPELLLRLYAELVRGRRYNAQATALTKQGRLAVYPS-STGQE 88 Query: 90 AVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFST 149 A + + L + D + +YR+ +A G+D + + L G + + + T Sbjct: 89 ACEIAAALVLEDRDWLFPSYRDTLAAVARGLDPVEALTLLRGDRHTGYDPREHRIAPLCT 148 Query: 150 KNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL 209 + Q+ G+A A + + D + + GDG ++G +E+ N AA+W Sbjct: 149 P---------LATQLPHAVGLAHAARLKGDDVVALAMVGDGGTSEGDFHEALNFAAVWRA 199 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 V+++++NN +A+ +++ +A + + + V + +PG VDG D A+ + +AVA R Sbjct: 200 PVVFLVQNNGFAISVPLAKQTAAPSLAHKAVGYGMPGRLVDGNDAAAMHQVLSEAVARAR 259 Query: 270 AHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 +GP ++E +TYR H+ +D A YR E+ R+ HDPI + + L E Sbjct: 260 RGEGPTLVEAVTYRMDAHTNADDATRYRGDSEVETWRA-HDPIVLLERELTGRGLLDEDG 318 Query: 329 LKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + + ++ E +D DP +L+S + Sbjct: 319 MTAVREEAERMAEGLREQMNADPVLDPMDLFSHV 352 >gi|11386135|ref|NP_000700.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial isoform 1 precursor [Homo sapiens] gi|548403|sp|P12694|ODBA_HUMAN RecName: Full=2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial; AltName: Full=Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; Short=BCKDE1A; Short=BCKDH E1-alpha; Flags: Precursor gi|29391|emb|CAA78475.1| branched chain decarboxylase alpha subunit [Homo sapiens] gi|14043871|gb|AAH07878.1| Branched chain keto acid dehydrogenase E1, alpha polypeptide [Homo sapiens] gi|14286270|gb|AAH08933.1| Branched chain keto acid dehydrogenase E1, alpha polypeptide [Homo sapiens] gi|18645155|gb|AAH23983.1| Branched chain keto acid dehydrogenase E1, alpha polypeptide [Homo sapiens] gi|119577443|gb|EAW57039.1| branched chain keto acid dehydrogenase E1, alpha polypeptide, isoform CRA_a [Homo sapiens] gi|119577444|gb|EAW57040.1| branched chain keto acid dehydrogenase E1, alpha polypeptide, isoform CRA_a [Homo sapiens] Length = 445 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 143/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 93 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 151 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 152 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 211 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 212 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 271 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 272 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 331 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R LL W E K R+ + Sbjct: 332 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 391 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 392 EAFEQAERKPKPNPNLLFSDV 412 >gi|323435894|ref|ZP_01048786.2| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Dokdonia donghaensis MED134] gi|321496209|gb|EAQ40020.2| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Dokdonia donghaensis MED134] Length = 668 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 2/303 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR ML R EEK L G + + IGQEA+ VG+ ++ + + ++ +R Sbjct: 24 LQLYRAMLKPRMIEEKMLILLRQGKISKWFS-GIGQEAISVGVTSAMRDEEYILPMHRNL 82 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G + ++ + G+ G +KG+ S H + + G +G Q+ + GIA Sbjct: 83 GVFTTREIPLYRLFTQWQGKMSGFTKGRDRSFHFGTQEYNIVGMISHLGPQLGVADGIAL 142 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+K R + V G+G ++G +E+ N+A++W L V++ IENN Y + T S Sbjct: 143 AHKLREEKAVTAVFTGEGGTSEGDFHEALNVASVWQLPVLFCIENNGYGLSTPTSEQYNC 202 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + + R + + +DG +I V + + R + P++IE T+R RGH + Sbjct: 203 EHLAHRAQGYGMESQIIDGNNILEVYTQISRITEDIRNNPRPVLIEFKTFRMRGHEEASG 262 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 Y +E+ +M + DP+ L S + + ++ IN +E + +++ Sbjct: 263 TKY-VPQELMDMWAKKDPLSNYEAYLKQEGILSATVKERYAVEIKNEINEHLEKSYQEEQ 321 Query: 353 PDP 355 P Sbjct: 322 ITP 324 >gi|194744739|ref|XP_001954850.1| GF18476 [Drosophila ananassae] gi|190627887|gb|EDV43411.1| GF18476 [Drosophila ananassae] Length = 439 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 85/310 (27%), Positives = 145/310 (46%), Gaps = 4/310 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R MLL+ ++ + G + F G+EA +G +L D + YRE G + Sbjct: 98 FRDMLLLNTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAALEMRDLIYGQYREAGVL 156 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G + + + G + +GK +H S + F + Q+ G A+A K Sbjct: 157 VWRGFRIDQFIDQCYGNVDDLGRGKQMPVHYGSRELNFVTISSPLSTQMPQAVGAAYAMK 216 Query: 176 YRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 ++ + CVVC FG+GAA++G + +FN AA VI NN +A+ T Sbjct: 217 MKKGNDACVVCYFGEGAASEGDAHAAFNFAATLGCPVILFCRNNGFAISTPSHEQYKGDG 276 Query: 235 FSKRG-VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + RG + + I ++VDG D+ AV M A Y P++ E L YR HS SD + Sbjct: 277 IAGRGPMGYGIATIRVDGTDVFAVYNAMKMAREYVLKENKPVVFEALAYRVSHHSTSDDS 336 Query: 294 N-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR+ EEI S +PI ++++ ++H W E + +VRK + + ++ + Sbjct: 337 TAYRSPEEIEVWNSVDNPISKLKRYMVHKGWFDEAEETAFIKDVRKKVLKQIAVSEKKLK 396 Query: 353 PDPAELYSDI 362 P+ E++ + Sbjct: 397 PNWREMFEGV 406 >gi|56419593|ref|YP_146911.1| dehydrogenase E1 component subunit alpha (lipoamide) [Geobacillus kaustophilus HTA426] gi|56379435|dbj|BAD75343.1| dehydrogenase E1 component, alpha subunit (lipoamide) [Geobacillus kaustophilus HTA426] Length = 369 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 90/295 (30%), Positives = 139/295 (47%), Gaps = 18/295 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + EQ R M+ R ++++ L G +G F GQEA + +L + D Sbjct: 39 MPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQIASHFALEKED 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF--YGGHGIVG 161 ++ YR+ I+ G+ + A L R G H G I+G Sbjct: 98 FILPGYRDVPQIIWHGLPLYQ--AFLFSR---------GHFHGNQIPEGVNVLPPQIIIG 146 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 AQ G+A K R + + GDG +QG YE N A + I+V++NN++A Sbjct: 147 AQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFA 206 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T V + + +++ V+ IPG+QVDGMD AV A + A +GP +IE L Sbjct: 207 ISTPVEKQTIAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPALIETLC 266 Query: 282 YRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDLKEIE 333 +RY H+MS DP YR++E NE + DP+ + RK L W+ E + + IE Sbjct: 267 FRYGPHTMSGDDPTRYRSKELENEW-AKKDPLVRFRKFLEAKGLWSEEEENRVIE 320 >gi|134104669|pdb|2J9F|A Chain A, Human Branched-Chain Alpha-Ketoacid Dehydrogenase- Decarboxylase E1b gi|134104671|pdb|2J9F|C Chain C, Human Branched-Chain Alpha-Ketoacid Dehydrogenase- Decarboxylase E1b Length = 400 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 142/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 106 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 107 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 167 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 227 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR +E+N PI ++R LL W E K R+ + Sbjct: 287 RIGHHSTSDDSSAYRPVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 346 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 347 EAFEQAERKPKPNPNLLFSDV 367 >gi|9955517|emb|CAC05456.1| branched-chain alpha keto-acid dehydrogenase E1 alpha subunit-like protein [Arabidopsis thaliana] Length = 414 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 1/284 (0%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 F IG+EA+ + +LT D + YRE G +L G + + G + KG Sbjct: 99 SFYATAIGEEAINIASAAALTPQDVIFPQYREPGVLLWRGFTLQEFANQCFGNKSDYGKG 158 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + +H S K ++ + Q+ G A++ K + D V FGDG ++G + Sbjct: 159 RQMPVHYGSNKLNYFTVSATIATQLPNAVGAAYSLKMDKKDACAVTYFGDGGTSEGDFHA 218 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 + NIAA+ V+++ NN +A+ T S +G ++ I ++VDG D A+ + Sbjct: 219 ALNIAAVMEAPVLFICRNNGWAISTPTSDQFRSDGVVVKGRAYGIRSIRVDGNDALAMYS 278 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 + A + PI+IE LTYR HS SD + YR+ EI +P+ + R + Sbjct: 279 AVHTAREMAIREQRPILIEALTYRVGHHSTSDDSTRYRSAGEIEWWNKARNPLSRFRTWI 338 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 N W S+ ++ ++K + ++ A+ ++P+ ++SD+ Sbjct: 339 ESNGWWSDKTESDLRSRIKKEMLEALRVAEKTEKPNLQNMFSDV 382 >gi|56966700|pdb|1W85|A Chain A, The Crystal Structure Of Pyruvate Dehydrogenase E1 Bound To The Peripheral Subunit Binding Domain Of E2 gi|56966702|pdb|1W85|C Chain C, The Crystal Structure Of Pyruvate Dehydrogenase E1 Bound To The Peripheral Subunit Binding Domain Of E2 gi|56966704|pdb|1W85|E Chain E, The Crystal Structure Of Pyruvate Dehydrogenase E1 Bound To The Peripheral Subunit Binding Domain Of E2 gi|56966706|pdb|1W85|G Chain G, The Crystal Structure Of Pyruvate Dehydrogenase E1 Bound To The Peripheral Subunit Binding Domain Of E2 Length = 368 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 95/324 (29%), Positives = 149/324 (45%), Gaps = 21/324 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + EQ R M+ R ++++ L G +G F GQEA + +L + D Sbjct: 38 MPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQIASHFALEKED 96 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF--YGGHGIVG 161 ++ YR+ I+ G+ + A L R G H G I+G Sbjct: 97 FILPGYRDVPQIIWHGLPLYQ--AFLFSR---------GHFHGNQIPEGVNVLPPQIIIG 145 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 AQ G+A K R + + GDG +QG YE N A + I+V++NN++A Sbjct: 146 AQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFA 205 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T V + + +++ V+ IPG+QVDGMD AV A + A +GP +IE L Sbjct: 206 ISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLC 265 Query: 282 YRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +RY H+MS DP YR++E NE + DP+ + RK L SE E E NV + Sbjct: 266 FRYGPHTMSGDDPTRYRSKELENEW-AKKDPLVRFRKFLEAKGLWSE----EEENNVIEQ 320 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 ++ A + P + +D++ Sbjct: 321 AKEEIKEAIKKADETPKQKVTDLI 344 >gi|39939086|ref|NP_950852.1| thiamine pyrophosphate-dependent dehydrogenase, E1 component alpha subunit [Onion yellows phytoplasma OY-M] gi|39722195|dbj|BAD04685.1| thiamine pyrophosphate-dependent dehydrogenase, E1 component alpha subunit [Onion yellows phytoplasma OY-M] Length = 363 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/289 (29%), Positives = 143/289 (49%), Gaps = 12/289 (4%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +K+ L Y+ M+L R+ + A + G +G + L GQEA VG+ +L D + Sbjct: 31 KLSKDVLLKMYKTMVLGRQADLAALKYQRQGRMGNYL-LNSGQEASQVGVAAALEPQDWV 89 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 YR+ G L GV + G + G K + I+G+ V+ Sbjct: 90 SPYYRDAGIFLYRGVSLEQFYLYWYGNEKG---------SQLDPKLRILPANIIIGSSVN 140 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+A A+K + ++ + GDG + N AA++ + ++ I+NNQY++ Sbjct: 141 LGAGLALASKMQNKKEVTIATIGDGGTAHEEFNAGLNYAAVFGVPLVVFIQNNQYSISNP 200 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 ++ S +++ + IPGMQVDG DI AV +A R GP +IE ++YR Sbjct: 201 RNKVSKAKTLAQKCYACGIPGMQVDGNDILAVYVAAQEAFNEARKGNGPTLIENVSYRLE 260 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 HS +D A+ YR++EE E R DPI + +K L++ + ++ +++ E Sbjct: 261 AHSTNDNASVYRSKEEELEWRK-KDPIVRFQKYLMNKGYLTQKQVEQFE 308 >gi|129061|sp|P21873|ODPA_BACST RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|219689224|pdb|3DUF|A Chain A, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multi-Enzyme Complex gi|219689226|pdb|3DUF|C Chain C, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multi-Enzyme Complex gi|219689229|pdb|3DUF|E Chain E, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multi-Enzyme Complex gi|219689231|pdb|3DUF|G Chain G, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multi-Enzyme Complex gi|220702406|pdb|3DV0|A Chain A, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multi-Enzyme Complex gi|220702408|pdb|3DV0|C Chain C, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multi-Enzyme Complex gi|220702410|pdb|3DV0|E Chain E, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multi-Enzyme Complex gi|220702412|pdb|3DV0|G Chain G, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multi-Enzyme Complex gi|40041|emb|CAA37628.1| pyruvate dehydrogenase (lipoamide) [Geobacillus stearothermophilus] Length = 369 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 95/324 (29%), Positives = 149/324 (45%), Gaps = 21/324 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + EQ R M+ R ++++ L G +G F GQEA + +L + D Sbjct: 39 MPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQIASHFALEKED 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF--YGGHGIVG 161 ++ YR+ I+ G+ + A L R G H G I+G Sbjct: 98 FILPGYRDVPQIIWHGLPLYQ--AFLFSR---------GHFHGNQIPEGVNVLPPQIIIG 146 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 AQ G+A K R + + GDG +QG YE N A + I+V++NN++A Sbjct: 147 AQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFA 206 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T V + + +++ V+ IPG+QVDGMD AV A + A +GP +IE L Sbjct: 207 ISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLC 266 Query: 282 YRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +RY H+MS DP YR++E NE + DP+ + RK L SE E E NV + Sbjct: 267 FRYGPHTMSGDDPTRYRSKELENEW-AKKDPLVRFRKFLEAKGLWSE----EEENNVIEQ 321 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 ++ A + P + +D++ Sbjct: 322 AKEEIKEAIKKADETPKQKVTDLI 345 >gi|78223709|ref|YP_385456.1| dehydrogenase, E1 component [Geobacter metallireducens GS-15] gi|78194964|gb|ABB32731.1| Dehydrogenase, E1 component [Geobacter metallireducens GS-15] Length = 352 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 89/305 (29%), Positives = 150/305 (49%), Gaps = 24/305 (7%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 R ++ +A L G +G + + +GQEA VG ++ E D + ++RE G L G A Sbjct: 47 RAYDGRALALQREGRLGTYPSV-LGQEAAQVGSAFAIHERDWVFPSFREMGVHLTLGYPA 105 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR----- 177 ++ G + G+ G M++F VS+GT I A Sbjct: 106 HQLFQYWGGDERGMRTPDG--MNIFPIS-------------VSVGTHIPHAAGAALAAKL 150 Query: 178 RSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R D I V+ FGDG ++G +E FN+A + L +++ +NNQ+A+ +S +A + + Sbjct: 151 RGDPIAVIAYFGDGGTSKGDFHEGFNLAGVMGLPTVFICQNNQWAISVPLSAQTASRSLA 210 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-Y 295 ++ +++ G+QVDG D+ AV +A+ R+ GP IE LTYR H+ SD A+ Y Sbjct: 211 QKALAYGFDGIQVDGNDVLAVYRATREALEKARSGGGPTFIECLTYRMSDHTTSDDASRY 270 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R+ EE+ + R DPI + + L +E E++ I+ +V +S P P Sbjct: 271 RSPEEMEQWR-ERDPILRYERFLAKRGLWNEDYAAEMKGKAGGEIDEAVRRYESVPPPAP 329 Query: 356 AELYS 360 E+++ Sbjct: 330 GEMFN 334 >gi|323718905|gb|EGB28059.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis CDC1551A] Length = 355 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/265 (31%), Positives = 132/265 (49%), Gaps = 14/265 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y +M++ R + + L G + + C GQEA VG L + D + YRE G Sbjct: 36 YEMMVVTRELDTEFVNLQRQGELALYTP-CRGQEAAQVGAAACLRKTDWLFPQYRELGVY 94 Query: 116 LACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 L G+ + G GG+ F+TK I G Q G A A Sbjct: 95 LVRGIPPGHVGVAWRGTWHGGLQ---------FTTKCCAPMSVPI-GTQTLHAVGAAMAA 144 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + D + V GDGA ++G V+E+ N AA++ ++ ++NNQ+A+ VSR +A + Sbjct: 145 QRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQWAISMPVSRQTAAPS 204 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + + + + +PG++VDG D+ A A M +A A RA GP +IE +TYR H+ + DP Sbjct: 205 IAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEAVTYRLGPHTTADDPT 264 Query: 294 NYRTREEINEMRSNHDPIEQVRKRL 318 YR++EE++ + DPI + R L Sbjct: 265 RYRSQEEVDRW-ATLDPIPRYRTYL 288 >gi|167838614|ref|ZP_02465473.1| pdhA [Burkholderia thailandensis MSMB43] Length = 362 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/278 (30%), Positives = 136/278 (48%), Gaps = 13/278 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M+L R F+ KA L G +G F IGQEA+ VG+ ++ D + +YR+H Sbjct: 36 LPLYRAMVLTRAFDTKAVALQRTGKIGTFAS-SIGQEAIGVGVASAMRADDVLFPSYRDH 94 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GV M E GG +G + N + QV G A+ Sbjct: 95 AAQFLRGV----TMTESLLYWGGDERGSDFTAARLDFPNCV-----PIATQVCHAAGAAY 145 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A R ++ V GDG ++G YE+ N+A W + ++ V+ NNQ+A+ +R +A Sbjct: 146 AFALRGEARVAVAVLGDGGTSKGDFYEAMNLAGAWRVPLVIVVNNNQWAISMPRARQTAA 205 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ ++ I G Q+DG DI AV+ + +A+ R GP ++E L+YR H+ +D Sbjct: 206 RTLAQKAIAAGIEGRQIDGNDIVAVRQAVGEAIENARRGGGPALVEALSYRLGDHTTADD 265 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGD 328 A YR + + + + +P+ ++RK L+ N W D Sbjct: 266 ATRYRDADALGKQWA-FEPLLRLRKHLMRRNVWDDAQD 302 >gi|325673585|ref|ZP_08153276.1| pyruvate dehydrogenase complex E1 component alpha subunit [Rhodococcus equi ATCC 33707] gi|325555606|gb|EGD25277.1| pyruvate dehydrogenase complex E1 component alpha subunit [Rhodococcus equi ATCC 33707] Length = 365 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 92/276 (33%), Positives = 131/276 (47%), Gaps = 13/276 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 VS+ EQ + Y +++ RR + +A L G +G + L +GQEA VG +L D Sbjct: 28 VSDVEPEQLRALYEDLVVSRRIDTEATALQRQGQLGIWAPL-LGQEAAQVGSARALERDD 86 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + T+YREH GVD EL R G + N +VGAQ Sbjct: 87 YIFTSYREHAVAYCRGVDP-----ELMTRMWRGCAHSGWDPATVNMTNPAI----VVGAQ 137 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A ++ VV FGDGA +QG + E+ AA V++ +NNQ+A+ Sbjct: 138 GLHATGYALGAHLDGAEIATVVYFGDGATSQGDLSEALGFAASLAAPVVFFCQNNQWAIS 197 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V S T + R +P +QVDG D+ AV A +A R GP +E +TYR Sbjct: 198 EPVHLQSP-TPIAARAAGHGMPAVQVDGNDVLAVLAVTREAARRARDGGGPSFVEAVTYR 256 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ S DP YRT E +E+ DPI+++R+ L Sbjct: 257 MGPHTTSDDPTRYRTAAE-SELWRARDPIDRMRRLL 291 >gi|220914551|ref|YP_002489860.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Arthrobacter chlorophenolicus A6] gi|219861429|gb|ACL41771.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Arthrobacter chlorophenolicus A6] Length = 413 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/303 (27%), Positives = 142/303 (46%), Gaps = 7/303 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M IRRF+ +A L G + + L GQEA +G + D + YREHG Sbjct: 66 YADMARIRRFDVEATALQRQGQLALWVPLT-GQEAAQIGSGRASQPQDYIFPTYREHGVA 124 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI---VGAQVSLGTGIAF 172 L VD ++++ + G G K + H+++ H + +G Q A Sbjct: 125 LTRDVDLAELLRQFRGVSNGGWNPKDTNFHLYTLVLAAQTLHAVGYAMGIQRDQKLAAAA 184 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 D + FGDGA+++G V+ES A+ ++ V++ +NN +A+ + + Sbjct: 185 GKAGNEPDAAVIAYFGDGASSEGDVHESMVFASSYSAPVVFFCQNNHWAISVPTN-VQTR 243 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-D 291 S R + PG++VDG D+ AV A + A+ + R KGP++IE TYR H+ + D Sbjct: 244 VPLSNRAKGYGFPGIRVDGNDVIAVHAVTEWALEHARQGKGPVLIEAFTYRVGAHTTADD 303 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 P YR EE + R+ DP+ ++ K L A + +++ + ++ A + Sbjct: 304 PTKYRGSEEEDAWRAK-DPLVRLEKYLRAEGLADDAYFAKVKADGDELAAYVRRTAHDLE 362 Query: 352 EPD 354 +PD Sbjct: 363 DPD 365 >gi|42573319|ref|NP_974756.1| 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative [Arabidopsis thaliana] gi|332003989|gb|AED91372.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Arabidopsis thaliana] Length = 401 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 1/284 (0%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 F IG+EA+ + +LT D + YRE G +L G + + G + KG Sbjct: 86 SFYATAIGEEAINIASAAALTPQDVIFPQYREPGVLLWRGFTLQEFANQCFGNKSDYGKG 145 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + +H S K ++ + Q+ G A++ K + D V FGDG ++G + Sbjct: 146 RQMPVHYGSNKLNYFTVSATIATQLPNAVGAAYSLKMDKKDACAVTYFGDGGTSEGDFHA 205 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 + NIAA+ V+++ NN +A+ T S +G ++ I ++VDG D A+ + Sbjct: 206 ALNIAAVMEAPVLFICRNNGWAISTPTSDQFRSDGVVVKGRAYGIRSIRVDGNDALAMYS 265 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 + A + PI+IE LTYR HS SD + YR+ EI +P+ + R + Sbjct: 266 AVHTAREMAIREQRPILIEALTYRVGHHSTSDDSTRYRSAGEIEWWNKARNPLSRFRTWI 325 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 N W S+ ++ ++K + ++ A+ ++P+ ++SD+ Sbjct: 326 ESNGWWSDKTESDLRSRIKKEMLEALRVAEKTEKPNLQNMFSDV 369 >gi|103486817|ref|YP_616378.1| 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) [Sphingopyxis alaskensis RB2256] gi|98976894|gb|ABF53045.1| branched-chain alpha-keto acid dehydrogenase E1 component [Sphingopyxis alaskensis RB2256] Length = 436 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/265 (28%), Positives = 131/265 (49%), Gaps = 4/265 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+L R F+++ + G F C G+EA + M++ D +YR+ G ++ Sbjct: 95 RYMMLTRAFDDRMFRAQRQGKTS-FYMKCTGEEATSIASTMAIDRADMCFPSYRQQGILI 153 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 A ++M ++ +G G+ + + ++GF+ G + Q G A A+ Sbjct: 154 ARDYPLIQMMNQIYSNRGDHLLGRQLPIMYSAPEHGFFSVSGNLATQYPQAVGWAMASAS 213 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNF 235 + +I V G+G++ +G + + A ++N VI+ + NNQ+A+ + A + T F Sbjct: 214 KGDTRIATVWCGEGSSAEGDFHSALTFATVYNAPVIFNVVNNQWAISSFSGFAGGERTTF 273 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + R V + I G++VDG D AV A A R + GP +IE TYR GHS S DP Sbjct: 274 AARAVGYGIAGLRVDGNDPLAVYAATQWAADRARTNNGPTLIEHFTYRAEGHSTSDDPGA 333 Query: 295 YRTREEINEMRSNHDPIEQVRKRLL 319 YR +E + DPI ++++ L+ Sbjct: 334 YRAAQEASAWPFG-DPIARLKQHLI 357 >gi|308232154|ref|ZP_07415107.2| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu001] gi|308369734|ref|ZP_07418873.2| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu002] gi|308371033|ref|ZP_07423619.2| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu003] gi|308372249|ref|ZP_07427973.2| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu004] gi|308373432|ref|ZP_07432280.2| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu005] gi|308374597|ref|ZP_07436675.2| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu006] gi|308375568|ref|ZP_07668060.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu007] gi|308377032|ref|ZP_07440921.2| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu008] gi|308378030|ref|ZP_07481310.2| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu009] gi|308379221|ref|ZP_07485542.2| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu010] gi|308380384|ref|ZP_07489765.2| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu011] gi|308214831|gb|EFO74230.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu001] gi|308326602|gb|EFP15453.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu002] gi|308330025|gb|EFP18876.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu003] gi|308333868|gb|EFP22719.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu004] gi|308337668|gb|EFP26519.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu005] gi|308341349|gb|EFP30200.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu006] gi|308345894|gb|EFP34745.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu007] gi|308349141|gb|EFP37992.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu008] gi|308353765|gb|EFP42616.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu009] gi|308357708|gb|EFP46559.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu010] gi|308361649|gb|EFP50500.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu011] Length = 357 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/265 (31%), Positives = 132/265 (49%), Gaps = 14/265 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y +M++ R + + L G + + C GQEA VG L + D + YRE G Sbjct: 38 YEMMVVTRELDTEFVNLQRQGELALYTP-CRGQEAAQVGAAACLRKTDWLFPQYRELGVY 96 Query: 116 LACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 L G+ + G GG+ F+TK I G Q G A A Sbjct: 97 LVRGIPPGHVGVAWRGTWHGGLQ---------FTTKCCAPMSVPI-GTQTLHAVGAAMAA 146 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + D + V GDGA ++G V+E+ N AA++ ++ ++NNQ+A+ VSR +A + Sbjct: 147 QRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQWAISMPVSRQTAAPS 206 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + + + + +PG++VDG D+ A A M +A A RA GP +IE +TYR H+ + DP Sbjct: 207 IAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEAVTYRLGPHTTADDPT 266 Query: 294 NYRTREEINEMRSNHDPIEQVRKRL 318 YR++EE++ + DPI + R L Sbjct: 267 RYRSQEEVDRW-ATLDPIPRYRTYL 290 >gi|254242103|ref|ZP_04935425.1| hypothetical protein PA2G_02832 [Pseudomonas aeruginosa 2192] gi|126195481|gb|EAZ59544.1| hypothetical protein PA2G_02832 [Pseudomonas aeruginosa 2192] Length = 365 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/297 (28%), Positives = 141/297 (47%), Gaps = 14/297 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLL R F++KA L G +G + +GQEA+ V + + D ++ YR+ Sbjct: 38 YRQMLLTRLFDQKAVALQRTGRIGTYAP-TLGQEAIGVAIGSQMRAEDVLVPYYRDTAVQ 96 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L GV I+ G + G + + F + Q G+A A + Sbjct: 97 LMRGVRMEDILLYWGGDERGSDYAEPLAAQDFPICVP-------IATQALHACGVASAFR 149 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R ++ V GDGA ++G E+ N+A W L V++V+ NNQ+A+ Sbjct: 150 IRGEHRVAVTTCGDGATSKGDFLEALNVAGAWQLPVLFVVNNNQWAISVPRRIQCGAPTL 209 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 +++ V PG QVDG D+ AV + A+ R KGP ++E ++YR H+ +D A+ Sbjct: 210 AEKAVGAGFPGEQVDGNDVLAVAERVRAALERARQGKGPTLLECISYRLCDHTTADDASR 269 Query: 295 YRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGD---LKEIEMNVRKIINNSVEFA 347 YR+ EE+N+ +PI+++R L +W E + + E + V++ + FA Sbjct: 270 YRSAEEVNQA-WREEPIKRLRAFLAGRGQWDEEREQALVGECQARVQEAVERFETFA 325 >gi|116051437|ref|YP_789730.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Pseudomonas aeruginosa UCBPP-PA14] gi|313108771|ref|ZP_07794760.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Pseudomonas aeruginosa 39016] gi|115586658|gb|ABJ12673.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Pseudomonas aeruginosa UCBPP-PA14] gi|310881262|gb|EFQ39856.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Pseudomonas aeruginosa 39016] Length = 365 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/297 (28%), Positives = 141/297 (47%), Gaps = 14/297 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLL R F++KA L G +G + +GQEA+ V + + D ++ YR+ Sbjct: 38 YRQMLLTRLFDQKAVALQRTGRIGTYAP-TLGQEAIGVAIGSQMRAEDVLVPYYRDTAVQ 96 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L GV I+ G + G + + F + Q G+A A + Sbjct: 97 LMRGVRMEDILLYWGGDERGSDYAEPLAAQDFPICVP-------IATQALHACGVASAFR 149 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R ++ V GDGA ++G E+ N+A W L V++V+ NNQ+A+ Sbjct: 150 IRGEHRVAVTTCGDGATSKGDFLEALNVAGAWQLPVLFVVNNNQWAISVPRRIQCGAPTL 209 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 +++ V PG QVDG D+ AV + A+ R KGP ++E ++YR H+ +D A+ Sbjct: 210 AEKAVGAGFPGEQVDGNDVLAVAERVRAALERARQGKGPTLLECISYRLCDHTTADDASR 269 Query: 295 YRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGD---LKEIEMNVRKIINNSVEFA 347 YR+ EE+N+ +PI+++R L +W E + + E + V++ + FA Sbjct: 270 YRSAEEVNQA-WREEPIKRLRAFLAGRGQWDEEREQALVGECQARVQEAVERFETFA 325 >gi|29830905|ref|NP_825539.1| 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) E1-alpha chain [Streptomyces avermitilis MA-4680] gi|624139|gb|AAA66072.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces avermitilis] gi|29608018|dbj|BAC72074.1| putative 3-methyl-2-oxobutanoate dehydrogenase E1-alpha chain [Streptomyces avermitilis MA-4680] Length = 381 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 139/301 (46%), Gaps = 12/301 (3%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR+ +A L G + + GQEA V + L E D + +YR+ +A G+D Sbjct: 61 RRYNTQATALTKQGRLAVYPS-STGQEACEVAAALVLEERDWLFPSYRDTLAAVARGLDP 119 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 + LT +G G H + + Q+ G+A A + + D + Sbjct: 120 VQA---LTLLRGDWHTGYDPREHRIAPLCT------PLATQLPHAVGLAHAARLKGDDVV 170 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 + GDG ++G +E+ N AA+W V+++++NN +A+ +++ +A + + + V + Sbjct: 171 ALALVGDGGTSEGDFHEALNFAAVWQAPVVFLVQNNGFAISVPLAKQTAAPSLAHKAVGY 230 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEI 301 +PG VDG D AV + AVA+ RA GP ++E +TYR H+ +D A YR E+ Sbjct: 231 GMPGRLVDGNDAAAVHEVLSDAVAHARAGGGPTLVEAVTYRIDAHTNADDATRYRGDSEV 290 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 R+ HDPI + L E ++ + + + D DP +L++ Sbjct: 291 EAWRA-HDPIALLEHELTERGLLDEDGIRAAREDAEAMAADLRARMNQDPALDPMDLFAH 349 Query: 362 I 362 + Sbjct: 350 V 350 >gi|107102951|ref|ZP_01366869.1| hypothetical protein PaerPA_01004020 [Pseudomonas aeruginosa PACS2] gi|218890383|ref|YP_002439247.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Pseudomonas aeruginosa LESB58] gi|218770606|emb|CAW26371.1| probable pyruvate dehydrogenase E1 component, alpha subunit [Pseudomonas aeruginosa LESB58] Length = 365 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/297 (28%), Positives = 141/297 (47%), Gaps = 14/297 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLL R F++KA L G +G + +GQEA+ V + + D ++ YR+ Sbjct: 38 YRQMLLTRLFDQKAVALQRTGRIGTYAP-TLGQEAIGVAIGSQMRAEDVLVPYYRDTAVQ 96 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L GV I+ G + G + + F + Q G+A A + Sbjct: 97 LMRGVRMEDILLYWGGDERGSDYAEPLAAQDFPICVP-------IATQALHACGVASAFR 149 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R ++ V GDGA ++G E+ N+A W L V++V+ NNQ+A+ Sbjct: 150 IRGEHRVAVTTCGDGATSKGDFLEALNVAGAWQLPVLFVVNNNQWAISVPRRIQCGAPTL 209 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 +++ V PG QVDG D+ AV + A+ R KGP ++E ++YR H+ +D A+ Sbjct: 210 AEKAVGAGFPGEQVDGNDVLAVAERVRAALERARQGKGPTLLECISYRLCDHTTADDASR 269 Query: 295 YRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGD---LKEIEMNVRKIINNSVEFA 347 YR+ EE+N+ +PI+++R L +W E + + E + V++ + FA Sbjct: 270 YRSAEEVNQA-WREEPIKRLRAFLAGRGQWDEEREQALVGECQARVQEAVERFETFA 325 >gi|215431443|ref|ZP_03429362.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis EAS054] gi|289754606|ref|ZP_06513984.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis EAS054] gi|289695193|gb|EFD62622.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis EAS054] Length = 345 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/265 (31%), Positives = 132/265 (49%), Gaps = 14/265 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y +M++ R + + L G + + C GQEA VG L + D + YRE G Sbjct: 26 YEMMVVTRELDTEFVNLQRQGELALYTP-CRGQEAAQVGAAACLRKTDWLFPQYRELGVY 84 Query: 116 LACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 L G+ + G GG+ F+TK I G Q G A A Sbjct: 85 LVRGIPPGHVGVAWRGTWHGGLQ---------FTTKCCAPMSVPI-GTQTLHAVGAAMAA 134 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + D + V GDGA ++G V+E+ N AA++ ++ ++NNQ+A+ VSR +A + Sbjct: 135 QRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQWAISMPVSRQTAAPS 194 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + + + + +PG++VDG D+ A A M +A A RA GP +IE +TYR H+ + DP Sbjct: 195 IAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEAVTYRLGPHTTADDPT 254 Query: 294 NYRTREEINEMRSNHDPIEQVRKRL 318 YR++EE++ + DPI + R L Sbjct: 255 RYRSQEEVDRW-ATLDPIPRYRTYL 278 >gi|297530775|ref|YP_003672050.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacillus sp. C56-T3] gi|297254027|gb|ADI27473.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. C56-T3] Length = 369 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 89/295 (30%), Positives = 139/295 (47%), Gaps = 18/295 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + EQ R M+ R ++++ L G +G F GQEA + +L + D Sbjct: 39 MPQLSNEQLKELMRRMVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQIASHFALEKED 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF--YGGHGIVG 161 ++ YR+ I+ G+ + A L R G H G I+G Sbjct: 98 FILPGYRDVPQIIWHGLPLYQ--AFLFSR---------GHFHGNQIPEGVNVLPPQIIIG 146 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 AQ G+A K R + + GDG +QG YE N A + I+V++NN++A Sbjct: 147 AQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFA 206 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T V + + +++ V+ IPG+QVDGMD AV A + A +GP +IE L Sbjct: 207 ISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLC 266 Query: 282 YRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDLKEIE 333 +RY H+MS DP YR++E NE + DP+ + RK L W+ E + + IE Sbjct: 267 FRYGPHTMSGDDPTRYRSKELENEW-AKKDPLVRFRKFLEAKGLWSEEEENRVIE 320 >gi|260187504|ref|ZP_05764978.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis CPHL_A] gi|289448142|ref|ZP_06437886.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis CPHL_A] gi|289421100|gb|EFD18301.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis CPHL_A] Length = 367 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/265 (31%), Positives = 132/265 (49%), Gaps = 14/265 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y +M++ R + + L G + + C GQEA VG L + D + YRE G Sbjct: 48 YEMMVVTRELDTEFVNLQRQGELALYTP-CRGQEAAQVGAAACLRKTDWLFPQYRELGVY 106 Query: 116 LACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 L G+ + G GG+ F+TK I G Q G A A Sbjct: 107 LVRGIPPGHVGVAWRGTWHGGLQ---------FTTKCCAPMSVPI-GTQTLHAVGAAMAA 156 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + D + V GDGA ++G V+E+ N AA++ ++ ++NNQ+A+ VSR +A + Sbjct: 157 QRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQWAISMPVSRQTAAPS 216 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + + + + +PG++VDG D+ A A M +A A RA GP +IE +TYR H+ + DP Sbjct: 217 IAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEAVTYRLGPHTTADDPT 276 Query: 294 NYRTREEINEMRSNHDPIEQVRKRL 318 YR++EE++ + DPI + R L Sbjct: 277 RYRSQEEVDRW-ATLDPIPRYRTYL 300 >gi|15598613|ref|NP_252107.1| pyruvate dehydrogenase E1 component, alpha subunit [Pseudomonas aeruginosa PAO1] gi|9949555|gb|AAG06805.1|AE004762_11 probable pyruvate dehydrogenase E1 component, alpha subunit [Pseudomonas aeruginosa PAO1] Length = 365 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/297 (28%), Positives = 141/297 (47%), Gaps = 14/297 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLL R F++KA L G +G + +GQEA+ V + + D ++ YR+ Sbjct: 38 YRQMLLTRLFDQKAVALQRTGRIGTYAP-TLGQEAIGVAIGSQMRAEDVLVPYYRDTAVQ 96 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L GV I+ G + G + + F + Q G+A A + Sbjct: 97 LMRGVRMEDILLYWGGDERGSDYAEPLAAQDFPICVP-------IATQALHACGVASAFR 149 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R ++ V GDGA ++G E+ N+A W L V++V+ NNQ+A+ Sbjct: 150 IRGEHRVAVTTCGDGATSKGDFLEALNVAGAWQLPVLFVVNNNQWAISVPRRIQCGAPTL 209 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 +++ V PG QVDG D+ AV + A+ R KGP ++E ++YR H+ +D A+ Sbjct: 210 AEKAVGAGFPGEQVDGNDVLAVAERVRAALERARQGKGPTLLECISYRLCDHTTADDASR 269 Query: 295 YRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGD---LKEIEMNVRKIINNSVEFA 347 YR+ EE+N+ +PI+++R L +W E + + E + V++ + FA Sbjct: 270 YRSAEEVNQA-WREEPIKRLRAFLAGRGQWDEEREQALVGECQARVQEAVERFETFA 325 >gi|224082376|ref|XP_002306669.1| predicted protein [Populus trichocarpa] gi|222856118|gb|EEE93665.1| predicted protein [Populus trichocarpa] Length = 395 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 76/284 (26%), Positives = 138/284 (48%), Gaps = 1/284 (0%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 F G+EA+ + +L+ D ++ YRE G +L G + + G + KG Sbjct: 80 SFYLTSTGEEAINIASAAALSADDIILPQYREPGILLWRGFTIQEFANQCFGNKDDYGKG 139 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + +H S K+ F + Q+ GIA++ K + D V GDG ++G + Sbjct: 140 RQMPIHYGSKKHNFVTISSPIATQLPQAVGIAYSLKMDKKDSCVVTYTGDGGTSEGDFHA 199 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 + N AA+ V+++ NN +A+ T +S RG ++ I ++VDG D AV + Sbjct: 200 ALNFAAVTEAPVVFICRNNGWAISTHISEQFRSDGIVVRGPAYGIRSIRVDGNDALAVYS 259 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 + A + + P+++E L+YR HS SD + YR +EI+ + +P+ + RK + Sbjct: 260 AIHAAREMAISKQRPVLVEALSYRVGHHSTSDDSTKYRPVDEIDYWKKERNPVNRFRKWV 319 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 N W SE E+ +++K + ++ A+ ++P L+SD+ Sbjct: 320 ERNVWWSEEKESELRSSIKKQLLQVIQVAEKTEKPPLKYLFSDV 363 >gi|15609634|ref|NP_217013.1| pyruvate dehydrogenase E1 component alpha subunit PdhA [Mycobacterium tuberculosis H37Rv] gi|15842025|ref|NP_337062.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit, putative [Mycobacterium tuberculosis CDC1551] gi|31793677|ref|NP_856170.1| pyruvate dehydrogenase E1 component alpha subunit PdhA [Mycobacterium bovis AF2122/97] gi|121638379|ref|YP_978603.1| putative pyruvate dehydrogenase E1 component subunit alpha pdhA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662333|ref|YP_001283856.1| putative 2-oxoisovalerate dehydrogenase E1 component subunit alpha [Mycobacterium tuberculosis H37Ra] gi|148823694|ref|YP_001288448.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis F11] gi|167967643|ref|ZP_02549920.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis H37Ra] gi|215412263|ref|ZP_03421023.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis 94_M4241A] gi|215446747|ref|ZP_03433499.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis T85] gi|224990873|ref|YP_002645560.1| putative pyruvate dehydrogenase E1 component subunit alpha [Mycobacterium bovis BCG str. Tokyo 172] gi|253798423|ref|YP_003031424.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis KZN 1435] gi|254366801|ref|ZP_04982843.1| pyruvate dehydrogenase E1 component (alpha subunit) pdhA [Mycobacterium tuberculosis str. Haarlem] gi|254551544|ref|ZP_05141991.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260205812|ref|ZP_05773303.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis K85] gi|289553711|ref|ZP_06442921.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis KZN 605] gi|289575202|ref|ZP_06455429.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis K85] gi|289758629|ref|ZP_06518007.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis T85] gi|294994395|ref|ZP_06800086.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis 210] gi|297635105|ref|ZP_06952885.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis KZN 4207] gi|297732096|ref|ZP_06961214.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis KZN R506] gi|298525969|ref|ZP_07013378.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Mycobacterium tuberculosis 94_M4241A] gi|307085181|ref|ZP_07494294.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu012] gi|313659430|ref|ZP_07816310.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis KZN V2475] gi|2113930|emb|CAB08930.1| PROBABLE PYRUVATE DEHYDROGENASE E1 COMPONENT (ALPHA SUBUNIT) PDHA (PYRUVATE DECARBOXYLASE) (PYRUVATE DEHYDROGENASE) (PYRUVIC DEHYDROGENASE) [Mycobacterium tuberculosis H37Rv] gi|13882302|gb|AAK46876.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit, putative [Mycobacterium tuberculosis CDC1551] gi|31619270|emb|CAD97386.1| PROBABLE PYRUVATE DEHYDROGENASE E1 COMPONENT (ALPHA SUBUNIT) PDHA (PYRUVATE DECARBOXYLASE) (PYRUVATE DEHYDROGENASE) (PYRUVIC DEHYDROGENASE) [Mycobacterium bovis AF2122/97] gi|121494027|emb|CAL72505.1| Probable pyruvate dehydrogenase E1 component (alpha subunit) pdhA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134152311|gb|EBA44356.1| pyruvate dehydrogenase E1 component (alpha subunit) pdhA [Mycobacterium tuberculosis str. Haarlem] gi|148506485|gb|ABQ74294.1| putative 2-oxoisovalerate dehydrogenase E1 component subunit alpha [Mycobacterium tuberculosis H37Ra] gi|148722221|gb|ABR06846.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis F11] gi|224773986|dbj|BAH26792.1| putative pyruvate dehydrogenase E1 component subunit alpha [Mycobacterium bovis BCG str. Tokyo 172] gi|253319926|gb|ACT24529.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis KZN 1435] gi|289438343|gb|EFD20836.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis KZN 605] gi|289539633|gb|EFD44211.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis K85] gi|289714193|gb|EFD78205.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis T85] gi|298495763|gb|EFI31057.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Mycobacterium tuberculosis 94_M4241A] gi|308365261|gb|EFP54112.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis SUMu012] gi|326904111|gb|EGE51044.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis W-148] gi|328458191|gb|AEB03614.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis KZN 4207] Length = 367 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/265 (31%), Positives = 132/265 (49%), Gaps = 14/265 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y +M++ R + + L G + + C GQEA VG L + D + YRE G Sbjct: 48 YEMMVVTRELDTEFVNLQRQGELALYTP-CRGQEAAQVGAAACLRKTDWLFPQYRELGVY 106 Query: 116 LACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 L G+ + G GG+ F+TK I G Q G A A Sbjct: 107 LVRGIPPGHVGVAWRGTWHGGLQ---------FTTKCCAPMSVPI-GTQTLHAVGAAMAA 156 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + D + V GDGA ++G V+E+ N AA++ ++ ++NNQ+A+ VSR +A + Sbjct: 157 QRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQWAISMPVSRQTAAPS 216 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + + + + +PG++VDG D+ A A M +A A RA GP +IE +TYR H+ + DP Sbjct: 217 IAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEAVTYRLGPHTTADDPT 276 Query: 294 NYRTREEINEMRSNHDPIEQVRKRL 318 YR++EE++ + DPI + R L Sbjct: 277 RYRSQEEVDRW-ATLDPIPRYRTYL 300 >gi|87199993|ref|YP_497250.1| branched-chain alpha-keto acid dehydrogenase E1 component [Novosphingobium aromaticivorans DSM 12444] gi|87135674|gb|ABD26416.1| branched-chain alpha-keto acid dehydrogenase E1 component [Novosphingobium aromaticivorans DSM 12444] Length = 424 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 83/275 (30%), Positives = 138/275 (50%), Gaps = 9/275 (3%) Query: 57 RLMLLIRRFEEKA--GQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 R M L R F+++ GQ G F C G+EA V M+L + D + +YR+ G Sbjct: 84 RTMALTRAFDDRMYRGQRQGKT---SFYMKCTGEEATSVAPAMALADDDMVFPSYRQQGI 140 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 ++A G +++ ++ + KG+ + + + F+ G + Q G A A+ Sbjct: 141 LIARGYPLVEMINQIYSNRADKLKGRQLPIMYSAREQSFFTISGNLATQYPQAVGWAMAS 200 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-T 233 + +I G+G+ +G + + AA++N VI+ + NNQ+A+ + A A+ T Sbjct: 201 AIKGDSRIAATWIGEGSTAEGDFHSAMTFAAVYNAPVIFNVVNNQWAISSFSGFAGAERT 260 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DP 292 F+ R + + I G++VDG D AV A A RA+ GP +IE TYR GHS S DP Sbjct: 261 TFAARAIGYGIAGLRVDGNDPLAVFAATQWAANRARANAGPTLIEHFTYRAEGHSTSDDP 320 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLH-NKWASE 326 YR+ +E E DP+ +++K L+ +W+ E Sbjct: 321 TQYRSAQEREEWPLG-DPVNRLKKHLVALGEWSDE 354 >gi|218680170|ref|ZP_03528067.1| putative dehydrogenase, fusion [Rhizobium etli CIAT 894] Length = 612 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 105/385 (27%), Positives = 157/385 (40%), Gaps = 67/385 (17%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-------CHLCIGQEAVIVGM 95 E +++ E L R M++IR FE L G G G HL IGQEA VG Sbjct: 40 ERAQYGDEGLLQILRDMMIIREFETILASLKGKGAYCGIEFNYKGPAHLSIGQEAAAVGA 99 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASK------------------------------- 124 SL D + ++R HG +A G+ A + Sbjct: 100 AASLEPHDHIFGSHRSHGEFIAKGLSAIRKLPDDALRLIMESHERGTLLRTVETSLRSPK 159 Query: 125 ------------IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 ++AE+ R G ++G GGSMH F G Y + IVGA + TG A Sbjct: 160 TSETAENFLLLGLLAEIFMRSTGFNRGMGGSMHAFFPPFGTYPNNAIVGASAGIATGAAL 219 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAA------LW------NLNVIYVIENNQY 220 K + I V GDG+ G V+E+ N AA LW L V++ NN Y Sbjct: 220 RKKLTGASGITVANAGDGSTGCGPVWEAMNFAAMAQFETLWADAFKGGLPVLFFFTNNFY 279 Query: 221 AM-GTSVSRASAQTNFSKRGVSFN---IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 AM G ++ S+ G++ N I VDG + AV + + +GP + Sbjct: 280 AMGGQTIGETMGWDRLSRIGLAVNQQAIHAETVDGTNPLAVADAVARKRELLVQGRGPAL 339 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +++ YR GHS +D +YRT++E+ + HDPI RL + G + E+ Sbjct: 340 LDVECYRSSGHSTTDINSYRTKDEM-QAWEQHDPIILFSNRLQEAGIVTAGQVAELREQT 398 Query: 337 RKIINNSVEFAQSDKEPDPAELYSD 361 + + A P ++++D Sbjct: 399 TDRMRSITAIAVDPALTPPVDIHAD 423 >gi|322698845|gb|EFY90612.1| 2-oxoisovalerate dehydrogenase alpha subunit precursor [Metarhizium acridum CQMa 102] Length = 450 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 83/290 (28%), Positives = 138/290 (47%), Gaps = 8/290 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+EAV VG L D + YRE G G+ + M++L + KG+ Sbjct: 121 FYMVSAGEEAVSVGSSSVLDPEDPVYCQYREQGFFRERGMTTKEFMSQLFANKNDPGKGR 180 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQ 194 +H S + + + Q+ +G +A K ++ K+ V FG+GAA++ Sbjct: 181 NMPVHYGSKRLNIHTVSSPLATQIPQASGAGYALKMQKLQDPNSKAKVAVCFFGEGAASE 240 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + VI++ NN YA+ T + RG+ + I +++DG DI Sbjct: 241 GDFHAAMNIAATRSCPVIFICRNNGYAISTPTLDQYRGDGIASRGIGYGIDTIRIDGNDI 300 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV+ + KA G PI+IE +TYR HS SD + YR R E+ + + +PI Sbjct: 301 WAVREAVKKAREMALQDGGKPILIECMTYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIT 360 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++RK + E K+ ++RK I A+ +K+P ++ D+ Sbjct: 361 RLRKWMEAKGCWDETKEKDARDSLRKEILKGFSEAEKEKKPALRTMFEDV 410 >gi|295703462|ref|YP_003596537.1| pyruvate dehydrogenase E1 component subunit alpha [Bacillus megaterium DSM 319] gi|294801121|gb|ADF38187.1| pyruvate dehydrogenase E1 component, alpha subunit [Bacillus megaterium DSM 319] Length = 371 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 23/299 (7%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 56 MVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQIASHFALEKEDFILPGYRDVPQLIWH 114 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG--FYGGHGIVGAQVSLGTGIAFANKY 176 G+ + A L R G H G I+GAQ+ G+A K Sbjct: 115 GLPLYQ--AFLFSR---------GHFHGNQAPEGVDILSPQIIIGAQIVQTAGVALGLKK 163 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R + + GDG A+QG YE N A + I+V++NN++A+ T V + SA + Sbjct: 164 RGKKAVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRFAISTPVEKQSAARTIA 223 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPAN 294 ++ + IPG+QVDGMD AV + +A +GP +IE LTYRY H+M+ DP Sbjct: 224 QKAAAVGIPGVQVDGMDALAVYVAVSEARERAVNGEGPTLIETLTYRYGPHTMAGDDPTR 283 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEM---NVRKIINNSVEFAQ 348 YRT E++ DP+ + RK L K W E + K IE ++++ I + ++ + Sbjct: 284 YRT-AELDTEWEKKDPLVRFRK-FLEAKGIWNEEEENKVIEQAKEDIKQAIKKADDYPK 340 >gi|18415939|ref|NP_568209.1| 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative [Arabidopsis thaliana] gi|28393751|gb|AAO42286.1| putative branched-chain alpha keto-acid dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|28973423|gb|AAO64036.1| putative branched-chain alpha keto-acid dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|332003988|gb|AED91371.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Arabidopsis thaliana] Length = 472 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 1/284 (0%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 F IG+EA+ + +LT D + YRE G +L G + + G + KG Sbjct: 157 SFYATAIGEEAINIASAAALTPQDVIFPQYREPGVLLWRGFTLQEFANQCFGNKSDYGKG 216 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + +H S K ++ + Q+ G A++ K + D V FGDG ++G + Sbjct: 217 RQMPVHYGSNKLNYFTVSATIATQLPNAVGAAYSLKMDKKDACAVTYFGDGGTSEGDFHA 276 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 + NIAA+ V+++ NN +A+ T S +G ++ I ++VDG D A+ + Sbjct: 277 ALNIAAVMEAPVLFICRNNGWAISTPTSDQFRSDGVVVKGRAYGIRSIRVDGNDALAMYS 336 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 + A + PI+IE LTYR HS SD + YR+ EI +P+ + R + Sbjct: 337 AVHTAREMAIREQRPILIEALTYRVGHHSTSDDSTRYRSAGEIEWWNKARNPLSRFRTWI 396 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 N W S+ ++ ++K + ++ A+ ++P+ ++SD+ Sbjct: 397 ESNGWWSDKTESDLRSRIKKEMLEALRVAEKTEKPNLQNMFSDV 440 >gi|229541256|ref|ZP_04430316.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Bacillus coagulans 36D1] gi|229325676|gb|EEN91351.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Bacillus coagulans 36D1] Length = 404 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 87/293 (29%), Positives = 140/293 (47%), Gaps = 14/293 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + EQ R M+ R ++++ L G +G F GQEA + +L + D Sbjct: 74 MPDLTDEQLQEMMRRMVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQIASHFALEKED 132 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + G G+ KG K I+GAQ Sbjct: 133 FILPGYRDVPQLIWHGLPLEQAFLWSRGHVDGM---KG------IEKLNILPPQIIIGAQ 183 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K R + V GDG ++QG YE N A + +++++NNQ+A+ Sbjct: 184 YVQTAGVALGIKKRGKKAVAVTYTGDGGSSQGDFYEGINFAGAFKAPAVFIVQNNQFAIS 243 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S +A +++ V+ IPG+ VDGMD +V A + +A A +GP +IE + YR Sbjct: 244 TPRSVQTAAKTLAQKAVAAGIPGIVVDGMDPFSVYAAVKRARERALAGEGPSLIETICYR 303 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGDLKEIE 333 + H+MS DP YRT + NE + DP+ + RK L N W+ E + + IE Sbjct: 304 FGPHTMSGDDPTRYRTEDLDNEW-AKKDPLVRFRKFLEQKNLWSEEQENETIE 355 >gi|329890884|ref|ZP_08269227.1| 2-oxoisovalerate dehydrogenase subunit alpha [Brevundimonas diminuta ATCC 11568] gi|328846185|gb|EGF95749.1| 2-oxoisovalerate dehydrogenase subunit alpha [Brevundimonas diminuta ATCC 11568] Length = 409 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 82/278 (29%), Positives = 136/278 (48%), Gaps = 6/278 (2%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + + E + M+L R F+++ + + G F C G+EA+ V M L+ D Sbjct: 70 PKLDPETMRRGLKAMILTRAFDDRMHRAHRQGKTS-FYMKCTGEEAIAVAQGMILSREDM 128 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQ 163 YR+ G ++A + +M ++ KG+ + M+S K+ GF+ G +G Q Sbjct: 129 GFPTYRQQGLLIARDYPLATMMNQIYSNAEDPIKGRQLPI-MYSAKDYGFFTISGNLGTQ 187 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A+ R DKI + GDG+ + + + AA++ VI I NNQ+A+ Sbjct: 188 YVQAVGWGMASAIRGDDKIAITWIGDGSTAESDFHSALTFAAVYRAPVILNIVNNQWAIS 247 Query: 224 TSVSRASA-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + A T F+ +G+ + +P ++VDG D AV A A R ++G IIE+ TY Sbjct: 248 SFQGIAGGLDTTFASKGIGYGLPALRVDGNDFLAVWAATQWAEERARTNQGATIIELFTY 307 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 R HS S DP+ YR +E +E DPI ++++ L+ Sbjct: 308 RGAPHSTSDDPSRYRPGDE-HEKWPLGDPIARLKQHLI 344 >gi|195037833|ref|XP_001990365.1| GH18279 [Drosophila grimshawi] gi|193894561|gb|EDV93427.1| GH18279 [Drosophila grimshawi] Length = 439 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 80/279 (28%), Positives = 134/279 (48%), Gaps = 3/279 (1%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EA +G +L D + YRE G ++ G + + + G + +GK +H Sbjct: 128 GEEASHIGSAAALEMRDLIYGQYREAGVLVWRGFRIDQFVDQCYGNDDDMGRGKQMPVHY 187 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAA 205 S + F + Q+ G A+A K + ++ CVVC FG+GAA++G + +FN AA Sbjct: 188 GSKELNFVTISSPLSTQIPQAVGAAYALKMKPNNDACVVCYFGEGAASEGDAHAAFNFAA 247 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG-VSFNIPGMQVDGMDIRAVKATMDKA 264 VI NN +A+ T + + RG + + I ++VDG D+ AV + KA Sbjct: 248 TLECPVILFCRNNGFAISTPSNEQYRGDGIAGRGPMGYGIATIRVDGTDVFAVYNAIKKA 307 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKW 323 Y PI+ E + YR HS SD + YR+ EEI + PI +++ ++H W Sbjct: 308 REYVLRENKPIVFETMAYRVGHHSTSDDSTAYRSAEEIEVWNTVEHPISKLKSYMVHKGW 367 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +E KE VRK + + ++ +P+ E++ + Sbjct: 368 FNEQQEKEFVSGVRKQVLKQISISEKKLKPNWREMFEGV 406 >gi|308173424|ref|YP_003920129.1| pyruvate dehydrogenase (E1 subunit alpha) [Bacillus amyloliquefaciens DSM 7] gi|307606288|emb|CBI42659.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus amyloliquefaciens DSM 7] gi|328553646|gb|AEB24138.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus amyloliquefaciens TA208] gi|328911509|gb|AEB63105.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus amyloliquefaciens LL3] Length = 371 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 19/301 (6%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 54 RRMVYTRVLDQRSISLNRQGRLG-FYAPTAGQEASQIATHFALEKEDFVLPGYRDVPQLI 112 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G+ + S+G M N I+GAQ G+A K Sbjct: 113 WHGLPLYQAFL--------FSRGHFRGNQMPDDVNAL-SPQIIIGAQYIQTAGVALGLKK 163 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R + + GDG A+QG YE N A + I+V++NN+YA+ T V + SA + Sbjct: 164 RGKKAVAITYTGDGGASQGDFYEGINFAGAYKAPAIFVVQNNRYAISTPVEKQSAAQTIA 223 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPAN 294 ++ + I G+QVDGMD AV A +A +GP +IE LT+RY H+M+ DP Sbjct: 224 QKAAAAGIVGVQVDGMDALAVYAATAEARERAINGEGPTLIETLTFRYGPHTMAGDDPTK 283 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YRT+E NE DP+ + R L NK W+ E + K IE ++ I +++ ++D E Sbjct: 284 YRTKEIENEWEQK-DPLVRFRA-FLENKGLWSEEEESKVIEA-AKEEIKQAIK--KADAE 338 Query: 353 P 353 P Sbjct: 339 P 339 >gi|138894592|ref|YP_001125045.1| pyruvate dehydrogenase (lipoamide)subunit alpha [Geobacillus thermodenitrificans NG80-2] gi|134266105|gb|ABO66300.1| Pyruvate dehydrogenase (lipoamide)alpha subunit [Geobacillus thermodenitrificans NG80-2] Length = 369 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/293 (29%), Positives = 138/293 (47%), Gaps = 14/293 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + EQ R M+ R ++++ L G +G F GQEA + +L + D Sbjct: 39 MPDLSDEQLKELMRRMVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQIASHFALEKED 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + S+G + N I+GAQ Sbjct: 98 FILPGYRDVPQLVWHGLPLYQAFL--------FSRGHFHGNQIPEDVNAL-PPQIIIGAQ 148 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K R + + GDG +QG YE N A + I+V++NN++A+ Sbjct: 149 YIQAAGVALGLKMREKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAIS 208 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T V + + +++ V+ IPG+QVDGMD AV A + A +GP +IE L +R Sbjct: 209 TPVEKQTVAKTLAQKAVAAGIPGIQVDGMDALAVYAAVKAARERAINGEGPTLIETLCFR 268 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDLKEIE 333 Y H+MS DP YR++E NE + DP+ + RK L W+ E + + IE Sbjct: 269 YGPHTMSGDDPTRYRSKELENEW-AKKDPLVRFRKFLEAKGLWSEEEENRVIE 320 >gi|219558497|ref|ZP_03537573.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis T17] gi|289570657|ref|ZP_06450884.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis T17] gi|289544411|gb|EFD48059.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis T17] Length = 349 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/265 (31%), Positives = 132/265 (49%), Gaps = 14/265 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y +M++ R + + L G + + C GQEA VG L + D + YRE G Sbjct: 30 YEMMVVTRELDTEFVNLQRQGELALYTP-CRGQEAAQVGAAACLRKTDWLFPQYRELGVY 88 Query: 116 LACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 L G+ + G GG+ F+TK I G Q G A A Sbjct: 89 LVRGIPPGHVGVAWRGTWHGGLQ---------FTTKCCAPMSVPI-GTQTLHAVGAAMAA 138 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + D + V GDGA ++G V+E+ N AA++ ++ ++NNQ+A+ VSR +A + Sbjct: 139 QRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQWAISMPVSRQTAAPS 198 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + + + + +PG++VDG D+ A A M +A A RA GP +IE +TYR H+ + DP Sbjct: 199 IAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEAVTYRLGPHTTADDPT 258 Query: 294 NYRTREEINEMRSNHDPIEQVRKRL 318 YR++EE++ + DPI + R L Sbjct: 259 RYRSQEEVDRW-ATLDPIPRYRTYL 282 >gi|116611847|gb|ABK04571.1| Pyruvate dehydrogenase (acetyl-transferring) [Arthrobacter sp. FB24] Length = 365 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 86/320 (26%), Positives = 150/320 (46%), Gaps = 12/320 (3%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G E S + L+AY +++ RR ++ L G + + GQEA V + L Sbjct: 28 GHEYSLPGDAELLAAYEQLVVGRRVNDQNSALVRQGRMAVYPS-SHGQEACQVAAALCLA 86 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 +GD + YR+ ++A GVD + M T +G G H + + Sbjct: 87 DGDWIFPTYRDSVAVMARGVDPVQTM---TLFRGDWHSGYDPLKHKVGIQCT------PL 137 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q+ G+A A K R D + + GDGA ++G +E+ N AA+++L VI+ ++NNQY Sbjct: 138 TTQLLHAVGVAHAAKLRGEDTVVLAMCGDGATSEGDFHEALNFAAVFHLPVIFFVQNNQY 197 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ ++ S + + + V + + G +VDG D+ A+ A + +AV R GP+++E Sbjct: 198 AISVPLAHQSVAPSLAHKAVGYGMAGERVDGNDVVALLAVLGRAVKLAREGSGPLLVEAH 257 Query: 281 TYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR + H+ +D A YR E+ + + DP+++++ L + I + Sbjct: 258 TYRMQAHTNADDATRYRQDSEVAQWVAK-DPLKRMQTYLTARGLLDDDGAARIADKAEAV 316 Query: 340 INNSVEFAQSDKEPDPAELY 359 E D DP +L+ Sbjct: 317 ATQLREGLGEDVPVDPQDLF 336 >gi|304570651|ref|YP_832671.2| pyruvate dehydrogenase (acetyl-transferring) [Arthrobacter sp. FB24] Length = 407 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 86/320 (26%), Positives = 150/320 (46%), Gaps = 12/320 (3%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G E S + L+AY +++ RR ++ L G + + GQEA V + L Sbjct: 70 GHEYSLPGDAELLAAYEQLVVGRRVNDQNSALVRQGRMAVYPS-SHGQEACQVAAALCLA 128 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 +GD + YR+ ++A GVD + M T +G G H + + Sbjct: 129 DGDWIFPTYRDSVAVMARGVDPVQTM---TLFRGDWHSGYDPLKHKVGIQCT------PL 179 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q+ G+A A K R D + + GDGA ++G +E+ N AA+++L VI+ ++NNQY Sbjct: 180 TTQLLHAVGVAHAAKLRGEDTVVLAMCGDGATSEGDFHEALNFAAVFHLPVIFFVQNNQY 239 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ ++ S + + + V + + G +VDG D+ A+ A + +AV R GP+++E Sbjct: 240 AISVPLAHQSVAPSLAHKAVGYGMAGERVDGNDVVALLAVLGRAVKLAREGSGPLLVEAH 299 Query: 281 TYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR + H+ +D A YR E+ + + DP+++++ L + I + Sbjct: 300 TYRMQAHTNADDATRYRQDSEVAQWVAK-DPLKRMQTYLTARGLLDDDGAARIADKAEAV 358 Query: 340 INNSVEFAQSDKEPDPAELY 359 E D DP +L+ Sbjct: 359 ATQLREGLGEDVPVDPQDLF 378 >gi|223940458|ref|ZP_03632309.1| Pyruvate dehydrogenase (acetyl-transferring) [bacterium Ellin514] gi|223890861|gb|EEF57371.1| Pyruvate dehydrogenase (acetyl-transferring) [bacterium Ellin514] Length = 355 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 90/314 (28%), Positives = 142/314 (45%), Gaps = 3/314 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 EV F +E L AYR MLL R +EK LY G + G L GQEA+ + MSL +G Sbjct: 24 EVLSF-RETYLKAYRGMLLARILDEKFASLYRGGKIHGGVFLGKGQEALSIATGMSLRKG 82 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D R+ LA G + + G G +G+ G++H K+G+ +GA Sbjct: 83 DVFAPLIRDAAGRLAFGETVLEAVRTYLGSPLGPMRGRDGNVHRGRPKDGYLPMVSHLGA 142 Query: 163 QVSLGTGIAFANKYRR-SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 +S+ G+ A++++ + GDG + G +E+ N AA+ L I V+ NNQYA Sbjct: 143 MLSVVNGVLMAHRFKGIKGTVGAASIGDGGTSTGAFHEALNQAAVEKLPFILVVANNQYA 202 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 T SR A + + + + + G ++G ++ T+ AVA R GP +I Sbjct: 203 YSTPNSRQFACESLVDKAIGYGVEGHTLEGNNLAECLKTLQLAVARARNGHGPQLIVADL 262 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R GH D ++Y + D ++ + L WA +L++ + Sbjct: 263 LRLCGHGEHDDSSY-LDSKWKSTPCGRDCLQLAEEYLFQQNWAKAEELRQWRGEATNQVE 321 Query: 342 NSVEFAQSDKEPDP 355 +V AQ + PDP Sbjct: 322 EAVATAQREGAPDP 335 >gi|294498113|ref|YP_003561813.1| pyruvate dehydrogenase E1 component subunit alpha [Bacillus megaterium QM B1551] gi|294348050|gb|ADE68379.1| pyruvate dehydrogenase E1 component, alpha subunit [Bacillus megaterium QM B1551] Length = 371 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 23/299 (7%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 56 MVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQIASHFALEKEDFILPGYRDVPQLIWH 114 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF--YGGHGIVGAQVSLGTGIAFANKY 176 G+ + A L R G H G I+GAQ+ G+A K Sbjct: 115 GLPLYQ--AFLFSR---------GHFHGNQAPEGVDVLSPQIIIGAQIVQTAGVALGLKK 163 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R + + GDG A+QG YE N A + I+V++NN++A+ T V + SA + Sbjct: 164 RGKKAVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRFAISTPVEKQSAARTIA 223 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPAN 294 ++ + IPG+QVDGMD AV + +A +GP +IE LTYRY H+M+ DP Sbjct: 224 QKAAAVGIPGVQVDGMDALAVYVAVSEARERAVNGEGPTLIETLTYRYGPHTMAGDDPTR 283 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEM---NVRKIINNSVEFAQ 348 YRT E++ DP+ + RK L K W E + K IE ++++ I + ++ + Sbjct: 284 YRT-AELDTEWEKKDPLVRFRK-FLEAKGIWNEEEENKVIEQAKEDIKQAIKKADDYPK 340 >gi|239980739|ref|ZP_04703263.1| 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) E1-alpha chain [Streptomyces albus J1074] gi|291452597|ref|ZP_06591987.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces albus J1074] gi|291355546|gb|EFE82448.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces albus J1074] Length = 398 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/308 (27%), Positives = 147/308 (47%), Gaps = 12/308 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R ++L RR+ +A L G + + GQEA V + L E D + +YR+ Sbjct: 71 HRELVLGRRYNTQATALTKQGRLAVYPS-STGQEACEVAAALVLEERDWLFPSYRDTLAA 129 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G+D + + L G + + ST + Q+ G+A A + Sbjct: 130 VARGLDPMEALTLLRGDWHTGYDPRAVRIAPLSTP---------LATQLPHAVGLAHAAR 180 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + D + + GDG ++G +E+ N AA+W V+++++NN +A+ + + +A + Sbjct: 181 LKGDDVVALAMVGDGGTSEGDFHEALNFAAVWQAPVVFLVQNNGFAISVPLDKQTAAPSL 240 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 + + V + +PG VDG D AV + +AVA RA GP ++E +TYR H+ +D A Sbjct: 241 AHKAVGYGMPGRLVDGNDALAVHTVLAEAVAGARAGGGPTLVEAITYRIDAHTNADDATR 300 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR EE+ R+ HDP+E + L A E + + + + E +D E Sbjct: 301 YRGAEEVEAWRA-HDPVELMEGALRARGLADEAAFAAVREDAERFAASLRERMNADAELT 359 Query: 355 PAELYSDI 362 PA+L+ + Sbjct: 360 PADLFDHV 367 >gi|118466239|ref|YP_880907.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycobacterium avium 104] gi|118167526|gb|ABK68423.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycobacterium avium 104] Length = 363 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 89/315 (28%), Positives = 146/315 (46%), Gaps = 40/315 (12%) Query: 22 SAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSA------YRLMLLIRRFEEKAGQLYGM 75 +++ T + V + +G SE +EL A Y +M+L R + + L Sbjct: 4 TSQPPMTVDLQPVQLVAADGTPTSEHRYSRELPAETLSWLYEMMVLTRELDGEFVNLKRQ 63 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 G + F C GQEA VG L + D + YRE G L G+ + G Sbjct: 64 GQLALFAS-CRGQEAAQVGATACLRKTDWLFPQYRELGAFLVRGIPPGNV--------GA 114 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGI-----------VGAQVSLGTGIAFANKYRRSDKICV 184 + +G ++GG G +G Q G A A + D + + Sbjct: 115 VWRGT------------WHGGLGFTDKCCAPLSIPIGTQTLHAVGAAMAAQRLGEDSVTI 162 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 GDGA + G V+E+ N AA++ ++ ++NNQ+A+ V++ +A + + + + + + Sbjct: 163 AFLGDGATSVGDVHEALNFAAVFRTPCVFFVQNNQWAISLPVAKQTASPSLAHKAIGYGM 222 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINE 303 PG++VDG D+ A A +A A RA GP +IE +TYR H+ S DP YRT++E++ Sbjct: 223 PGIRVDGNDVLACYAVTAEAAARARAGGGPTLIEAITYRLGPHTTSDDPTRYRTQDEVDH 282 Query: 304 MRSNHDPIEQVRKRL 318 + DPI + R L Sbjct: 283 W-AALDPIPRYRSYL 296 >gi|297201031|ref|ZP_06918428.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sviceus ATCC 29083] gi|197712185|gb|EDY56219.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sviceus ATCC 29083] Length = 381 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 12/301 (3%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR+ +A L G + + GQEA + ++L + D + +YR+ +A GVD Sbjct: 61 RRYNTQATALTKQGRLAVYPS-STGQEACEIAAALALQDRDWLFPSYRDTLAAVARGVDP 119 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 + + L +G G H + + Q+ G+A A + + D + Sbjct: 120 VQALTLL---RGDWHTGYDPREHRVAPLCT------PLATQLPHAVGLAHAARLKGDDVV 170 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 + GDG ++G +E+ N AA+W V+++++NN +A+ +++ +A + + + V + Sbjct: 171 ALAMVGDGGTSEGDFHEALNFAAVWQAPVVFLVQNNGFAISVPLAKQTAAPSLAHKAVGY 230 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEI 301 +PG VDG D AV + AV + RA GP ++E +TYR H+ +D A YR E+ Sbjct: 231 GMPGRLVDGNDAAAVHEILTAAVRHARAGGGPTLVEAITYRVDAHTNADDATRYRGDAEV 290 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 R HDPI + L E ++ + + + E D DP +L++ Sbjct: 291 ETWR-GHDPIALLEHELTERGLIDEAGIEAVRQDAEEFAAGLRERMNQDPVLDPMDLFAH 349 Query: 362 I 362 + Sbjct: 350 V 350 >gi|297622460|ref|YP_003703894.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Truepera radiovictrix DSM 17093] gi|297163640|gb|ADI13351.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Truepera radiovictrix DSM 17093] Length = 347 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 16/279 (5%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F+ + + YR + R ++E+A L G +G + GQEA VG ++ D ++ Sbjct: 19 FDDDDLVRGYRALRRARFWDERASVLQRQGKLGVYPPYR-GQEAAQVGTMLAFEPSDWLV 77 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +YRE L G+ + ++ G +G ++ F + Q+ Sbjct: 78 PSYRESAAALTHGLPLATLILYWRAHPAGWRFPEGVNILPFYVP---------IATQLPQ 128 Query: 167 GTGIAFANKYRR----SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 G+A A + R S I GDG ++G +E+ N A+++ +++++NN +A+ Sbjct: 129 AVGLAHALRLRGAQNGSQPIVATFVGDGGTSEGDFHEALNFASVFEAPAVFIVQNNGWAI 188 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 +R + R + +PG+ VDG D+ AV +AVA R GP +IE +TY Sbjct: 189 SVPTTRQMKTKRVAARAAGYEMPGVTVDGNDLLAVWKVAQEAVARAREGGGPTLIEAMTY 248 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLH 320 R H+ S DP+ YRT EE DP++++R L H Sbjct: 249 RVAPHTTSDDPSRYRTEEEAASW-IGRDPVKRMRTALAH 286 >gi|320593484|gb|EFX05893.1| 2-oxoisovalerate dehydrogenase complex alpha [Grosmannia clavigera kw1407] Length = 431 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 80/290 (27%), Positives = 141/290 (48%), Gaps = 8/290 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+EA VG +LT D + YRE G G + M++L + + G+ Sbjct: 103 FYMVSSGEEAACVGTASALTADDVIFCQYREQGVFQQRGFTLREFMSQLFANKYDMGGGR 162 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQ 194 +H S + + +G Q+ G A+A K +R KI V FG+GAA++ Sbjct: 163 NMPVHYGSRRLNIHTISSPLGTQIPHAAGAAYAIKIQRMQNPAAPPKIAAVYFGEGAASE 222 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + V+++ NN Y++ T + RG+ + + ++VDG D+ Sbjct: 223 GDFHAALNIAATRSCPVVFICRNNGYSISTPALEQYRGDGIASRGLGYGMDTVRVDGNDL 282 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV+ M +A G P+++E LTYR HS SD + YR + E+ + + +P+ Sbjct: 283 WAVRTAMKRARELALQDGGKPVLLECLTYRIGHHSTSDDSFAYRAKVEVEDWKRRDNPVS 342 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++RK L ++ KE ++RK+I + A+ +++P L+ + Sbjct: 343 RLRKWLEARGCWNDAREKETRADIRKLILKAFGDAEKEQKPPIRNLFEGV 392 >gi|313884704|ref|ZP_07818460.1| pyruvate dehydrogenase E1 component, alpha subunit [Eremococcus coleocola ACS-139-V-Col8] gi|312620072|gb|EFR31505.1| pyruvate dehydrogenase E1 component, alpha subunit [Eremococcus coleocola ACS-139-V-Col8] Length = 369 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 89/308 (28%), Positives = 135/308 (43%), Gaps = 13/308 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E E+ + M+ R + ++ G +G F GQEA +G + T D Sbjct: 39 MPELTDEELVKFMEDMVFYREWNDRMKAFSRQGRLG-FVAPTSGQEASQLGTIAATTSDD 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YR+ ++ G+ K G G + Y I+GAQ Sbjct: 98 VIFPGYRDLPQLMQHGLPRYKAFLWSKGHVEG---------SQYPEDFHAYPPQIIIGAQ 148 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A K I + GDG ++QG VYE N A + ++VI+NN +A+ Sbjct: 149 YVQAAGAALGIKKNGRKAIAMTWTGDGGSSQGDVYEGMNYAGAFKAPAVFVIQNNGWAIS 208 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + +A +++GV+ IPG+QVDGMDI AV A A Y GP++IE L YR Sbjct: 209 TPRAYQTAAPTLAQKGVAAGIPGIQVDGMDILAVYAVAKAAREYAVEGNGPVLIETLCYR 268 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 Y HS+S DP Y+ E E DP+ + R L SE E+ N ++ Sbjct: 269 YGAHSLSGDDPKRYQP-EGAQEHWRGLDPLNRYRIFLTEKGLWSEEKEAEVVANAKETAK 327 Query: 342 NSVEFAQS 349 +++ A+S Sbjct: 328 AAIKEAES 335 >gi|56967004|pdb|1X7Y|A Chain A, Crystal Structure Of The Human Mitochondrial Branched-Chain Alpha-Ketoacid Dehydrogenase Length = 400 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 88/321 (27%), Positives = 143/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 106 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 107 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 167 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 227 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R H+ SD ++ YR+ +E+N PI ++R LL W E K R+ + Sbjct: 287 RIGHHNTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 346 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 347 EAFEQAERKPKPNPNLLFSDV 367 >gi|220702416|pdb|3DVA|A Chain A, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multi-Enzyme Complex gi|220702418|pdb|3DVA|C Chain C, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multi-Enzyme Complex gi|220702420|pdb|3DVA|E Chain E, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multi-Enzyme Complex gi|220702422|pdb|3DVA|G Chain G, Snapshots Of Catalysis In The E1 Subunit Of The Pyruvate Dehydrogenase Multi-Enzyme Complex Length = 369 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 91/301 (30%), Positives = 139/301 (46%), Gaps = 18/301 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + EQ R M+ R ++++ L G +G F GQEA + +L + D Sbjct: 39 MPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQIASHFALEKED 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF--YGGHGIVG 161 ++ YR+ I+ G+ + A L R G H G I+G Sbjct: 98 FILPGYRDVPQIIWHGLPLYQ--AFLFSR---------GHFHGNQIPEGVNVLPPQIIIG 146 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 AQ G+A K R + + GDG +QG YE N A + I+V++NN++A Sbjct: 147 AQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFA 206 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 T V + + +++ V+ IPG+QVDGMD AV A + A +GP +IE L Sbjct: 207 ASTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLC 266 Query: 282 YRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDLKEIEMNVRK 338 +RY H+MS DP YR++E NE + DP+ + RK L W+ E + IE + Sbjct: 267 FRYGPHTMSGDDPTRYRSKELENEW-AKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEE 325 Query: 339 I 339 I Sbjct: 326 I 326 >gi|315104726|gb|EFT76702.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL050PA2] Length = 351 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 88/273 (32%), Positives = 134/273 (49%), Gaps = 21/273 (7%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + A +M++ RR + +A L G +G + L +GQEA G ++L EGDQ+ YRE Sbjct: 27 VKALEMMVMTRRLDVEATALQRHGELGLWPPL-LGQEATQAGAWLALREGDQVFPTYREQ 85 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G A GV +A++ G G S ++ + G G + A + + Sbjct: 86 GLAHAMGVS----LADILGAWDGTSHCGWDTVATHFSAYPVMIGSGTLHA-------VGY 134 Query: 173 ANKYRRS-----DKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 A +R D V+ F GDGA ++G E++ AA N V++V NNQ+A+ Sbjct: 135 AMGVQRDVEAGGDPAAVLDFHGDGAMSEGDTNEAYVFAASMNAPVVFVCVNNQWAISEPT 194 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + S + F +R F IP +QVDG D+ A+ A + A+ Y R+ KGP+ +E TYR Sbjct: 195 TVQSPTSLF-RRATGFGIPAVQVDGNDVIAMMAVLRSALEYARSGKGPVFVEAWTYRMGA 253 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ + DP YR EE DPI ++R L Sbjct: 254 HTTTDDPTRYRAAEE-ESTWGKTDPIVRLRTYL 285 >gi|296388066|ref|ZP_06877541.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Pseudomonas aeruginosa PAb1] Length = 365 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 11/273 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLL R F++KA L G +G + +GQEA+ V + + D ++ YR+ Sbjct: 38 YRQMLLTRLFDQKAVALQRTGRIGTYAP-TLGQEAIGVAIGSQMRAEDVLVPYYRDTAVQ 96 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L GV I+ G + G + + F + Q G+A A + Sbjct: 97 LMRGVRMEDILLYWGGDERGSDYAEPLAAQDFPICVP-------IATQALHACGVASAFR 149 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R ++ V GDGA ++G E+ N+A W L V++V+ NNQ+A+ Sbjct: 150 IRGEHRVAVTTCGDGATSKGDFLEALNVAGAWQLPVLFVVNNNQWAISVPRRIQCGAPTL 209 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 +++ V PG QVDG D+ AV + A+ R KGP ++E ++YR H+ +D A+ Sbjct: 210 AEKAVGAGFPGEQVDGNDVLAVAERVRAALERARQGKGPTLLECISYRLCDHTTADDASR 269 Query: 295 YRTREEINEMRSNHDPIEQVRKRLL-HNKWASE 326 YR+ EE+N+ +PI+++R L +W E Sbjct: 270 YRSAEEVNQA-WREEPIKRLRAFLAGRGQWDEE 301 >gi|254494866|ref|ZP_01052061.2| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Polaribacter sp. MED152] gi|213690448|gb|EAQ41489.2| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Polaribacter sp. MED152] Length = 629 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 1/270 (0%) Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 IGQEA+ VG+ +L + ++ +R G + ++ A+ G+ G +KG+ S H Sbjct: 17 IGQEAISVGVTKALDTDEYILPMHRNLGVFTTREIPLYRLFAQWQGKMSGFTKGRDRSFH 76 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 + + G +G Q+ + GIA ANK + K+C V G+G ++G +E+ NIA+ Sbjct: 77 FGTQEFNIIGMISHLGPQLGVADGIALANKLQNKQKVCAVFTGEGGTSEGDFHEALNIAS 136 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 +W+L V++ +ENN Y + T S N + +G+ + + ++G +I V + + Sbjct: 137 VWSLPVLFCVENNGYGLSTPTSEQFNCKNIADKGIGYGMESHIIEGNNILEVYTKVKELA 196 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 R PI+IE T+R RGH + Y +E+ + DPI L + Sbjct: 197 ESMRLTPRPILIEFKTFRVRGHEEASGTKY-VPQELLDFWGAKDPIINFENYLRSKSILN 255 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 + E + + IN +E A ++++ P Sbjct: 256 DEIDNEFKTIITSEINEHLEIAYAEEKIIP 285 >gi|152968231|ref|YP_001364015.1| pyruvate dehydrogenase (acetyl-transferring) [Kineococcus radiotolerans SRS30216] gi|151362748|gb|ABS05751.1| Pyruvate dehydrogenase (acetyl-transferring) [Kineococcus radiotolerans SRS30216] Length = 390 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 93/320 (29%), Positives = 144/320 (45%), Gaps = 31/320 (9%) Query: 16 ALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAY--------RLMLLIRRFEE 67 A+ P + +R D V + +G V + E E+ R M+L+RR + Sbjct: 5 AVGPDRAGERQGAQQGDMVQLLGPDG--VRRTHPEHEVDLEPEELLALLRDMVLLRRLDA 62 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 + L G +G GQEA VG + DQ+ +YR+HG +L G+D I++ Sbjct: 63 EGEALQRQGQLG-LWPGSRGQEAAQVGSATACRRQDQVFPSYRDHGAVLGRGIDPVDILS 121 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV--SLGTGIAF------ANKYRRS 179 G G +H ++ ++ AQ+ ++G G+A Sbjct: 122 IFRGVDHGGWDPAEQRVHPYTL---------VIAAQMLPAVGYGMAVQRDGAVGTGDPER 172 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 D + FGDGA +QG+ E+ N AA++ V+++ +NNQ+A+ VSR S KR Sbjct: 173 DTAVITYFGDGATSQGEAAEALNWAAVFQAPVVFLCQNNQWAISEPVSRQSP-VPLHKRA 231 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTR 298 +PG+ VDG D+ AV A A+ R+ GP +E TYR H+ + DP YR Sbjct: 232 EGAGMPGVLVDGNDVLAVLAVTRAALERARSGGGPTFVEAFTYRMGAHTTADDPTRYRLS 291 Query: 299 EEINEMRSNHDPIEQVRKRL 318 E R DPI++ R L Sbjct: 292 AETEAWREK-DPIDRFRTYL 310 >gi|315187050|gb|EFU20807.1| Transketolase central region [Spirochaeta thermophila DSM 6578] Length = 818 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 103/396 (26%), Positives = 168/396 (42%), Gaps = 69/396 (17%) Query: 24 KRAATSSVDCVDIPFLEG---FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 ++ AT +D + + G E++ + KE+ L Y M IR FE + G G Sbjct: 13 RKRATLKIDPIPLNQYRGNTEEELARYGKERLLRIYYDMRTIREFESMLDAIKKQGAWEG 72 Query: 81 F-------CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA------CGVDASKI-- 125 HL IGQEA VG ++L D + ++R HG ILA +D ++ Sbjct: 73 IKYDHKGPAHLSIGQEAAAVGQALNLDVEDFIFGSHRSHGEILAKCYSAIWKLDEQRLRE 132 Query: 126 ----------------------------------MAELTGRQGGISKGKGGSMHMFSTKN 151 +AE+ R+ G ++G GGSMH F Sbjct: 133 VMEGYLDGEILAVVDRIPHTDVKDLAENFVLYGTLAEIFARKTGFNRGLGGSMHAFFVPF 192 Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA------ 205 G + IVG + G A + R I + GDG+ G V+E+ +A+ Sbjct: 193 GVMPNNAIVGGSADIAVGAALYKRINRKPGIVIANIGDGSTGCGPVWEAMMLASMDQYRK 252 Query: 206 LWNLNV------IYVIENNQYAM-GTSVSRASAQTNFSKRGVSFNIPGM---QVDGMDIR 255 LW V ++ NN YAM G + ++ G N M +VDG + Sbjct: 253 LWPEEVGGAPPMLFNFFNNFYAMGGQTFGETMGYQVLARIGAGVNPENMHAERVDGYNPL 312 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVR 315 AV + + A +GP++++ +TYR+ GHS SD ++YRT +E+ DP++ Sbjct: 313 AVADAVARKKELLLAGRGPVLLDTVTYRFSGHSPSDASSYRTEDEVKRW-EKVDPLKGYA 371 Query: 316 KRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 L+ + A+ DL++++ VR+ + V+ A D+ Sbjct: 372 DYLVKHGIATPEDLRKLDERVRQKLIPVVKLATDDE 407 >gi|283958282|ref|ZP_06375733.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|283790431|gb|EFC29248.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus aureus subsp. aureus A017934/97] Length = 330 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 93/306 (30%), Positives = 133/306 (43%), Gaps = 3/306 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM +L EGD YR+ + Sbjct: 18 YKWMDLGRKIDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYALEEGDITAPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ A G++ + S GK H S V Q+ G A A Sbjct: 77 TYMGISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSSPVATQIPHAVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K KI G+G++NQG +E N A + L + VI NN+YA+ S A Sbjct: 137 KMDGKKKIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + + QVDG D A+ M +A + +G +IE +T R HS D Sbjct: 197 LSDRALGYGLHSEQVDGNDPLAMYKAMKEARDRAISGQGSTLIEAVTSRMTAHSSDDDDQ 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE E D E+ +K LL + L EIE + IIN + + A+ P Sbjct: 257 YRTKEE-REALKKADCNEKFKKELLSAGIIDDAWLAEIEAEHKDIINKATKAAEDAPYPS 315 Query: 355 PAELYS 360 E Y+ Sbjct: 316 VEEAYA 321 >gi|56967000|pdb|1X7W|A Chain A, Crystal Structure Of The Human Mitochondrial Branched-Chain Alpha-Ketoacid Dehydrogenase Length = 400 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 88/321 (27%), Positives = 142/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 106 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 107 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 167 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 227 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R H SD ++ YR+ +E+N PI ++R LL W E K R+ + Sbjct: 287 RIGHHQTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 346 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 347 EAFEQAERKPKPNPNLLFSDV 367 >gi|56967006|pdb|1X7Z|A Chain A, Crystal Structure Of The Human Mitochondrial Branched-Chain Alpha-Ketoacid Dehydrogenase Length = 400 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 88/321 (27%), Positives = 142/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 106 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 107 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 167 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 227 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R H SD ++ YR+ +E+N PI ++R LL W E K R+ + Sbjct: 287 RIGHHDTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 346 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 347 EAFEQAERKPKPNPNLLFSDV 367 >gi|56967008|pdb|1X80|A Chain A, Crystal Structure Of The Human Mitochondrial Branched-Chain Alpha-Ketoacid Dehydrogenase Length = 400 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 88/321 (27%), Positives = 142/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 106 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 107 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 167 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 227 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R H SD ++ YR+ +E+N PI ++R LL W E K R+ + Sbjct: 287 RIGHHXTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 346 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 347 EAFEQAERKPKPNPNLLFSDV 367 >gi|289550712|ref|YP_003471616.1| Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Staphylococcus lugdunensis HKU09-01] gi|315658208|ref|ZP_07911080.1| 3-methyl-2-oxobutanoate dehydrogenase [Staphylococcus lugdunensis M23590] gi|289180244|gb|ADC87489.1| Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Staphylococcus lugdunensis HKU09-01] gi|315496537|gb|EFU84860.1| 3-methyl-2-oxobutanoate dehydrogenase [Staphylococcus lugdunensis M23590] Length = 332 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 96/315 (30%), Positives = 144/315 (45%), Gaps = 4/315 (1%) Query: 50 EQELSA-YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 E +L A ++ M L R+ +E+ L G + F GQEA +GM +L EGD Sbjct: 11 EDDLKAIFKGMDLGRKVDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYALKEGDISSPY 69 Query: 109 YREHGHILACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+ + G+ +IM G++ + S GK H G VG Q+ Sbjct: 70 YRDLAFVTYMGMSPYQIMLNSFGKKDDVNSGGKQMPAHYGYKAKGMLSQSSPVGTQIPHT 129 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A A K + + I V G+G+ NQG +E N A + L ++ VI NN+YA+ S Sbjct: 130 AGAALALKMDKKENIAVATIGEGSTNQGDFHEGLNFAGVHKLPLVCVIINNKYAISVPDS 189 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 A S R + + I G+ VDG D AV A M +A GP +IE +T R H Sbjct: 190 LQYAAEKLSDRAIGYGIKGITVDGNDPIAVYAAMKEARIRALNGDGPTLIEAVTARMTPH 249 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 S D YR++ I E +D + + LL + L +IE + IIN + + A Sbjct: 250 SSDDDDQYRSK-SIKEGLKANDCNVKFKSYLLDTGIIDQTWLDKIENEHKHIINQATKDA 308 Query: 348 QSDKEPDPAELYSDI 362 ++ P+ E Y+ + Sbjct: 309 EAADYPNVEEAYTHV 323 >gi|125622953|ref|YP_001031436.1| pyruvate dehydrogenase E1 component alpha subunit [Lactococcus lactis subsp. cremoris MG1363] gi|124491761|emb|CAL96680.1| pyruvate dehydrogenase E1 component alpha subunit [Lactococcus lactis subsp. cremoris MG1363] gi|300069693|gb|ADJ59093.1| pyruvate dehydrogenase E1 component alpha subunit [Lactococcus lactis subsp. cremoris NZ9000] Length = 374 Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 17/285 (5%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG + + + E+ + ++ ML R+ + ++ +L G +G F GQEA + + Sbjct: 37 EGLKRAGLSDEKLVELFKSMLFARQVDIRSMKLAKQGRMGFFGPHA-GQEASQMASAFAF 95 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG----FYG 155 T+ D + YR+ I A G K + G Q G + ++T +G + Sbjct: 96 TDEDWLFPGYRDLPQIYAKGWPIWKGLLWSRGHQLG---------NEYTTDDGKPVNSWF 146 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 I+GAQ G+A K R+ D + V GDG ++QG YE N A + ++ I Sbjct: 147 PQIIIGAQYVEAAGVALGLKKRKKDAVAFVYTGDGGSSQGDTYEGINFAGAYKAPLVAFI 206 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +NN YA+ T S SA + + +G + P + VDGMD A+ +A A+ A GP+ Sbjct: 207 QNNGYAISTPRSLQSAAPHLAAKGWAAGAPSIVVDGMDAIAMYLASKEARAWAVAGNGPV 266 Query: 276 IIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +IE +T R HS + DP YRT+E+I E +P+ ++R L Sbjct: 267 VIEAITNRLEPHSTAGDDPLRYRTKEDI-EAWWKKEPLVRMRNFL 310 >gi|56967002|pdb|1X7X|A Chain A, Crystal Structure Of The Human Mitochondrial Branched-Chain Alpha-Ketoacid Dehydrogenase Length = 400 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 88/321 (27%), Positives = 142/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 106 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 107 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 167 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 227 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R H SD ++ YR+ +E+N PI ++R LL W E K R+ + Sbjct: 287 RIGHHETSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 346 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 347 EAFEQAERKPKPNPNLLFSDV 367 >gi|27468116|ref|NP_764753.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus epidermidis ATCC 12228] gi|251810930|ref|ZP_04825403.1| 3-methyl-2-oxobutanoate dehydrogenase [Staphylococcus epidermidis BCM-HMP0060] gi|282876061|ref|ZP_06284928.1| dehydrogenase E1 component [Staphylococcus epidermidis SK135] gi|27315662|gb|AAO04797.1|AE016748_31 branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus epidermidis ATCC 12228] gi|251805610|gb|EES58267.1| 3-methyl-2-oxobutanoate dehydrogenase [Staphylococcus epidermidis BCM-HMP0060] gi|281295086|gb|EFA87613.1| dehydrogenase E1 component [Staphylococcus epidermidis SK135] gi|329737207|gb|EGG73461.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus epidermidis VCU028] Length = 332 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 91/303 (30%), Positives = 140/303 (46%), Gaps = 5/303 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM ++ +GD YR+ + Sbjct: 18 YKWMDLGRKTDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYAMQKGDISSPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ M G++ I S GK H + G V Q+ G A A Sbjct: 77 TYMGISPLDTMLSAFGKRDDINSGGKQMPSHFSHKEKGILSQSSPVATQIPHSVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K I G+G++NQG +E N AA+ L + VI NN+YA+ S A Sbjct: 137 KMDNKPNIATATVGEGSSNQGDFHEGMNFAAVHKLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + + G+QVDG D AV M +A A +GP +IE +T R HS D Sbjct: 197 LSDRALGYGMHGIQVDGNDPIAVYKAMKEARERALAGEGPTLIEAVTSRMTPHSSDDDDT 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE + ++ I + + LL +E L ++E +++IN + + A++ P Sbjct: 257 YRTKEERDLLKQEDCNI-KFKTALLDQGIINENWLSQLETEHKELINEATKSAEA--APY 313 Query: 355 PAE 357 P+E Sbjct: 314 PSE 316 >gi|50843533|ref|YP_056760.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes KPA171202] gi|50841135|gb|AAT83802.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes KPA171202] Length = 381 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 86/267 (32%), Positives = 131/267 (49%), Gaps = 9/267 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + A +M++ RR + +A L G +G + L +GQEA G ++L EGDQ+ YRE Sbjct: 57 VKALEMMVMTRRLDVEATALQRHGELGLWPPL-LGQEATQAGAWLALREGDQVFPTYREQ 115 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G A GV +A++ G G S ++ + G G + A V G+ Sbjct: 116 GLAHAMGVS----LADILGAWDGTSHCGWDTVATHFSAYPVMIGSGTLHA-VGYAMGVQR 170 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 + + GDGA ++G E++ AA N V++V NNQ+A+ + S Sbjct: 171 DVEAGGGPAAVLDFHGDGAMSEGDTNEAYVFAASMNAPVVFVCVNNQWAISEPTTVQSPT 230 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-D 291 + F +R F IP +QVDG D+ A+ A + A+ Y R+ KGP+ +E TYR H+ + D Sbjct: 231 SLF-RRATGFGIPAVQVDGNDVIAMMAVLRSALEYARSGKGPVFVEAWTYRMGAHTTTDD 289 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRL 318 P YRT EE DPI ++R L Sbjct: 290 PTRYRTAEE-ESTWGKTDPIVRLRTYL 315 >gi|59808237|gb|AAH89915.1| Bckdha protein [Rattus norvegicus] Length = 328 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 82/277 (29%), Positives = 130/277 (46%), Gaps = 1/277 (0%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+E VG +L D + YRE G ++ MA+ G KG+ +H Sbjct: 19 GEEGTHVGSAAALERTDLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDPGKGRQMPVHY 78 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 + F + Q+ G A+A K +++I + FG+GAA++G + FN AA Sbjct: 79 GCKERHFVTISSPLATQIPQAVGAAYAAKRANANQIVICYFGEGAASEGDAHAGFNFAAT 138 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 +I+ NN YA+ T S + RG + I ++VDG D+ AV +A Sbjct: 139 LECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARR 198 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 A P +IE +TYR HS SD ++ YR+ +E+N PI ++R+ LL+ W Sbjct: 199 RAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWD 258 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 E K RK + + E A+ +P+P+ L+SD+ Sbjct: 259 EEQEKAWRKQSRKKVMEAFEQAERKLKPNPSLLFSDV 295 >gi|18313489|ref|NP_560156.1| pyruvate dehydrogenase E1 alpha subunit [Pyrobaculum aerophilum str. IM2] gi|18161027|gb|AAL64338.1| pyruvate dehydrogenase E1 alpha subunit [Pyrobaculum aerophilum str. IM2] Length = 372 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 94/329 (28%), Positives = 153/329 (46%), Gaps = 8/329 (2%) Query: 39 LEGFEVSEFNKEQELS-AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 LE +EV E EL+ AYR M+L R + A + MG V G EA G + Sbjct: 32 LETYEVGYKPSEGELAKAYRWMVLGRVLDRYALMYHRMGKVKSTYGPHEGHEAADAGTAL 91 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +L D + YR ++A GV I A+ + G KG+ ++ K Sbjct: 92 ALRPEDWVAPYYRNLTLLIARGVPLEVIWAKFFAKLGDPDKGRNLTIEWGGFKQWRILSI 151 Query: 158 GI-VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 G +G Q G A+A KY + ++ GDG + + N A ++ + + I Sbjct: 152 GAPIGHQYIYAAGFAYALKYLKKKEVVAAYIGDGGTSTNGFHTGLNFAGVFKVPAAFFIY 211 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NNQYA+ VS +A + S + ++ + G+ DGMD+ AV T AV +A +G P Sbjct: 212 NNQYAISVPVSIQTAVSRLSTKAAAYGLVGVSADGMDLLAVVKTAMWAVE--KARRGEPT 269 Query: 276 IIEMLTYRYRGHSMSDPA--NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 ++E + YR+ H+ +D YR +E+ E R DP+ ++ K L+ SEGD+K I Sbjct: 270 LVEYVMYRFGPHTTADDPLTKYRDPKEVEEYR-RWDPLARLEKFLIRQGIYSEGDVKTIW 328 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + + + + A++ + EL +D+ Sbjct: 329 EEAEREVKEAAKEAEALPDVPAEELINDV 357 >gi|56966713|pdb|1W88|A Chain A, The Crystal Structure Of Pyruvate Dehydrogenase E1(D180n, E183q) Bound To The Peripheral Subunit Binding Domain Of E2 gi|56966715|pdb|1W88|C Chain C, The Crystal Structure Of Pyruvate Dehydrogenase E1(D180n, E183q) Bound To The Peripheral Subunit Binding Domain Of E2 gi|56966717|pdb|1W88|E Chain E, The Crystal Structure Of Pyruvate Dehydrogenase E1(D180n, E183q) Bound To The Peripheral Subunit Binding Domain Of E2 gi|56966719|pdb|1W88|G Chain G, The Crystal Structure Of Pyruvate Dehydrogenase E1(D180n, E183q) Bound To The Peripheral Subunit Binding Domain Of E2 Length = 368 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 94/324 (29%), Positives = 149/324 (45%), Gaps = 21/324 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + EQ R M+ R ++++ L G +G F GQEA + +L + D Sbjct: 38 MPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQIASHFALEKED 96 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF--YGGHGIVG 161 ++ YR+ I+ G+ + A L R G H G I+G Sbjct: 97 FILPGYRDVPQIIWHGLPLYQ--AFLFSR---------GHFHGNQIPEGVNVLPPQIIIG 145 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 AQ G+A K R + + GDG +QG Y+ N A + I+V++NN++A Sbjct: 146 AQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGNFYQGINFAGAFKAPAIFVVQNNRFA 205 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + T V + + +++ V+ IPG+QVDGMD AV A + A +GP +IE L Sbjct: 206 ISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLC 265 Query: 282 YRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +RY H+MS DP YR++E NE + DP+ + RK L SE E E NV + Sbjct: 266 FRYGPHTMSGDDPTRYRSKELENEW-AKKDPLVRFRKFLEAKGLWSE----EEENNVIEQ 320 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 ++ A + P + +D++ Sbjct: 321 AKEEIKEAIKKADETPKQKVTDLI 344 >gi|88796981|ref|ZP_01112571.1| 2-oxoisovalerate dehydrogenase complex, E1 component, alpha subunit [Reinekea sp. MED297] gi|88779850|gb|EAR11035.1| 2-oxoisovalerate dehydrogenase complex, E1 component, alpha subunit [Reinekea sp. MED297] Length = 389 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 80/329 (24%), Positives = 149/329 (45%), Gaps = 3/329 (0%) Query: 35 DIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG 94 D +G +F+++ + Y+ ++ R +E+ G + F +G+EA VG Sbjct: 28 DGTLYQGASAPDFSEDFAVKVYQDLVFTRVLDERMINAQRQGRIP-FYLASLGEEAASVG 86 Query: 95 MKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 +L++ D + YRE G + G A + M + + + KG+ +H S + Sbjct: 87 SAAALSDHDMIFAQYREQGALRLRGFTAQQFMDQCFSNELDLGKGRQMPIHYGSKALNYM 146 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 + Q+ G A+ K D + + FG+GAA++G + N+AA+ N +++ Sbjct: 147 TISSPLATQIPQAAGYAYGQKLAGLDAVTICYFGEGAASEGDFHAGVNMAAVLNCPTLFL 206 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 NN YA+ T + RG+ + I ++VDG D+ A+ A Y + P Sbjct: 207 CRNNGYAISTPADEQFKGDGVASRGIGYGIKTIRVDGNDLLAMYEATRIARDYALENNAP 266 Query: 275 IIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 ++IE ++YR HS S DP YR+++E + + DP+ + + L W + K + Sbjct: 267 VLIEAMSYRLGAHSTSDDPTGYRSKDEEAKW-AKKDPVLRYKHWLTKQGWWDDDKEKALY 325 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDI 362 R+ I + ++ A+ P L D+ Sbjct: 326 AEYREDILSQMKAAEKRPVPTLDHLIEDV 354 >gi|239942620|ref|ZP_04694557.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces roseosporus NRRL 15998] gi|239989079|ref|ZP_04709743.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces roseosporus NRRL 11379] gi|291446081|ref|ZP_06585471.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces roseosporus NRRL 15998] gi|291349028|gb|EFE75932.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces roseosporus NRRL 15998] Length = 386 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 75/320 (23%), Positives = 151/320 (47%), Gaps = 12/320 (3%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ + E L + ++ RR+ +A L G + + GQEA + + L E D Sbjct: 44 VADVDPELLLRLHAELVRGRRYNAQATALTKQGRLAVYPS-STGQEACEIAAALVLEERD 102 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +YR+ +A G+D + + L G + + + T + Q Sbjct: 103 WLFPSYRDTLAAVARGLDPVEALTLLRGDRHTGYDPREHRIAPLCTP---------LATQ 153 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A A + + D + + GDG ++G +E+ N AA+W V++ ++NN +A+ Sbjct: 154 LPHAVGLAHAARLKGDDVVALAMVGDGGTSEGDFHEALNFAAVWKAPVVFFVQNNGFAIS 213 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 +++ +A + + + V + +PG VDG D AV + +AVA R +GP ++E +TYR Sbjct: 214 VPLAKQTAAPSLAHKAVGYGMPGRLVDGNDAAAVHQVLSEAVARARRGEGPTLVEAVTYR 273 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ +D A YR E+ ++ HDP+ + + L + +++ + ++ Sbjct: 274 MEAHTNADDATRYRVDSEVEAWKA-HDPVRLLERELTERGLLDDAGIEQAKEAAERMAAA 332 Query: 343 SVEFAQSDKEPDPAELYSDI 362 + +D E P +L++ + Sbjct: 333 LRDRMNADPELTPMDLFTHV 352 >gi|108805282|ref|YP_645219.1| branched-chain alpha-keto acid dehydrogenase E1 component [Rubrobacter xylanophilus DSM 9941] gi|108766525|gb|ABG05407.1| branched-chain alpha-keto acid dehydrogenase E1 component [Rubrobacter xylanophilus DSM 9941] Length = 333 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 89/295 (30%), Positives = 134/295 (45%), Gaps = 4/295 (1%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVD 121 RR +E++ L G F C GQEA VG M L G D + YR+HG +L G+ Sbjct: 29 RRVDERSWILNRQGKAA-FVISCQGQEAAQVGAAMHLRPGYDYVYPYYRDHGIVLTLGMT 87 Query: 122 ASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 A M L R+ S G+ H S + + Q G A A K R D Sbjct: 88 ARDEMLALLAREEDPNSGGRQMPGHFSSRELNIVTASAPIAVQFPQAVGSALAFKMRGED 147 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 + + C G+ + ++G +E+ N A + L V+++I+NN YA+ A + ++R Sbjct: 148 GVVLACGGEASTSEGDWHEAMNFAGVHGLPVVFLIQNNHYAISVPEPLQVAGS-IARRAE 206 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREE 300 + PG++VDG D+ AV +A A R +GP +IE TYR HS D E Sbjct: 207 GYGFPGVEVDGNDVLAVYEAAGEAFARARKGEGPTLIEAKTYRLTAHSSDDDDRRYRERE 266 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 E DPI + + L+ N E I+ VR+ + + E+A++ DP Sbjct: 267 EVEQWRLKDPIPRFERYLMENGVLDEAARDRIDAEVREEVREASEYAENAPVADP 321 >gi|34534581|dbj|BAC87051.1| unnamed protein product [Homo sapiens] Length = 479 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 142/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 127 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 185 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 186 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 245 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG GAA++G + FN AA +I+ NN YA+ Sbjct: 246 QIPQAVGAAYAAKRANANRVVICYFGGGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 305 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 306 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 365 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R LL W E K R+ + Sbjct: 366 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 425 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 426 EAFEQAERKPKPNPNLLFSDV 446 >gi|116510885|ref|YP_808101.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Lactococcus lactis subsp. cremoris SK11] gi|116106539|gb|ABJ71679.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Lactococcus lactis subsp. cremoris SK11] Length = 374 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 17/285 (5%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG + + + E+ + ++ ML R+ + ++ +L G +G F GQEA + + Sbjct: 37 EGLKRAGLSDEKLVELFKSMLFARQVDIRSMKLAKQGRMGFFGPHA-GQEASQMASGFAF 95 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG----FYG 155 T+ D + YR+ I A G K + G Q G + ++T +G + Sbjct: 96 TDEDWLFPGYRDLPQIYAKGWPIWKGLLWSRGHQLG---------NEYTTDDGKPVNSWF 146 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 I+GAQ G+A K R+ D + V GDG ++QG YE N A + ++ I Sbjct: 147 PQIIIGAQYVEAAGVALGLKKRKKDAVAFVYTGDGGSSQGDTYEGINFAGAYKAPLVAFI 206 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +NN YA+ T S SA + + +G + P + VDGMD A+ +A A+ A GP+ Sbjct: 207 QNNGYAISTPRSLQSAAPHLAAKGWAAGAPSIVVDGMDAIAMYLASKEARAWAVAGNGPV 266 Query: 276 IIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +IE +T R HS + DP YRT+E+I E +P+ ++R L Sbjct: 267 VIEAITNRLEPHSTAGDDPLRYRTKEDI-EAWWKKEPLVRMRNFL 310 >gi|57866998|ref|YP_188655.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus epidermidis RP62A] gi|293366526|ref|ZP_06613203.1| branched-chain alpha-keto acid dehydrogenase [Staphylococcus epidermidis M23864:W2(grey)] gi|57637656|gb|AAW54444.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus epidermidis RP62A] gi|291319295|gb|EFE59664.1| branched-chain alpha-keto acid dehydrogenase [Staphylococcus epidermidis M23864:W2(grey)] gi|329735393|gb|EGG71685.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus epidermidis VCU045] Length = 332 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 91/303 (30%), Positives = 140/303 (46%), Gaps = 5/303 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM ++ +GD YR+ + Sbjct: 18 YKWMDLGRKTDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYAMQKGDISSPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ M G++ I S GK H + G V Q+ G A A Sbjct: 77 TYMGISPLDTMLSAFGKRDDINSGGKQMPSHFSHKEKGILSQSSPVATQIPHSVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K I G+G++NQG +E N AA+ L + VI NN+YA+ S A Sbjct: 137 KMDNKPNIATATVGEGSSNQGDFHEGMNFAAVHKLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + + G+QVDG D AV M +A A +GP +IE +T R HS D Sbjct: 197 LSDRALGYGMHGIQVDGNDPIAVYKAMKEARERALAGEGPTLIEAVTSRMTPHSSDDDDT 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE + ++ I + + LL +E L ++E +++IN + + A++ P Sbjct: 257 YRTKEERDLLKQEDCNI-KFKTALLDQGIINENWLSQLEKEHKELINEATKSAEA--APY 313 Query: 355 PAE 357 P+E Sbjct: 314 PSE 316 >gi|301776619|ref|XP_002923727.1| PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial-like [Ailuropoda melanoleuca] Length = 446 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 88/321 (27%), Positives = 143/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L YR M L+ + + G + F G+E VG +L Sbjct: 94 EDPHLPQEKVLKFYRSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 152 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 153 DLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDLGKGRQMPVHYGCRERHFVTISSPLAT 212 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 213 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 272 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 273 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 332 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R L W + K RK + Sbjct: 333 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLQSRGWWDDEQEKAWRKQSRKKVM 392 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P+ L+SD+ Sbjct: 393 EAFEQAERKPKPNPSLLFSDV 413 >gi|119961173|ref|YP_949570.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Arthrobacter aurescens TC1] gi|119948032|gb|ABM06943.1| putative pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Arthrobacter aurescens TC1] Length = 396 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 22/290 (7%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M IRRF+++A L G + + L GQEA +G + D + YREHG Sbjct: 62 YTDMARIRRFDQEATALQRQGELALWVPLT-GQEAAQIGSAHASQSQDYIFPTYREHGVA 120 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ----VSLGTGIA 171 L VD ++++ + G G + + H+++ ++ AQ V GI Sbjct: 121 LVRNVDLAELLKQFRGVSNGGWDPRENNFHLYTL---------VLAAQTLHAVGYAMGIQ 171 Query: 172 FANKYRRSD----KICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 K +D K V+ FGDGA+++G V+ES AA +N V++ +NN +A+ Sbjct: 172 RDQKLAAADSTDPKAAVIAYFGDGASSEGDVHESMVFAASYNAPVVFFCQNNHWAISVP- 230 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + + + R + PG++VDG D AV A + A+ + R +GP++IE TYR Sbjct: 231 TEVQTKVPLANRAKGYGFPGIRVDGNDAIAVHAVTEWALEHAREGRGPVLIEAYTYRVGA 290 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 H+ + DP YR E R DP++++ K L A E +++ + Sbjct: 291 HTTADDPTKYRESAEEAAWREK-DPLDRLEKYLRTEGLADEAFFDQVKAD 339 >gi|290963053|ref|YP_003494235.1| pyruvate dehydrogenase E1 protein subunit alpha [Streptomyces scabiei 87.22] gi|260652579|emb|CBG75712.1| PROBABLE PYRUVATE DEHYDROGENASE E1 COMPONENT (ALPHA SUBUNIT) PDHA (PYRUVATE DECARBOXYLASE) (PYRUVATE DEHYDROGENASE) (PYRUVIC DEHYDROGENASE) [Streptomyces scabiei 87.22] Length = 384 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 132/259 (50%), Gaps = 14/259 (5%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 A+R M+L RRF+ +A L G + + GQEA VG ++L D + YR+ Sbjct: 48 AHRRMVLGRRFDTQATALTKQGRLAVYPS-SRGQEACQVGAALALRPDDWLFPTYRDSVA 106 Query: 115 ILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 ++ G+D +++ L G G + + + QV TG+A + Sbjct: 107 LVTRGIDPVEVLTLLRGEWHCGYDPAATRTAPQCTP----------LATQVLHATGMAES 156 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 + + D + + GDGA ++G +E+ N AA++ V+++++NN+YA+ ++R +A Sbjct: 157 LRRKGEDGVAMALVGDGATSEGDFHEALNFAAVFRAPVVFLVQNNKYAISVPLARQTAAP 216 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + +GV + QVDG D AV A + +AVA+ RA GP ++E TYR H+ +D A Sbjct: 217 ALAYKGVGHGMRSEQVDGNDPVAVLAVLTEAVAHARAGHGPFLVEAHTYRMDAHTNADDA 276 Query: 294 N-YRTREEINEMRSNHDPI 311 YR +E+ R+ DP+ Sbjct: 277 TRYRDADEVERWRAA-DPL 294 >gi|169627996|ref|YP_001701645.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycobacterium abscessus ATCC 19977] gi|169239963|emb|CAM60991.1| Probable pyruvate dehydrogenase E1 component, alpha subunit [Mycobacterium abscessus] Length = 374 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 90/304 (29%), Positives = 146/304 (48%), Gaps = 15/304 (4%) Query: 19 PSVSAKRAATSSVDCVDI---PFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGM 75 P+ A A S+V +D P G + ++ L+ YR M+L RRF+E+A L Sbjct: 10 PAYQAFLPADSAVQFLDPEGRPVDGGARYPRPDADRLLAMYRNMVLGRRFDEQATALTKQ 69 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 G + + GQEA + M L D + YR+ + A G+D I+ L G Sbjct: 70 GRLAVYPS-SRGQEACQIAAAMCLHSDDWLFPTYRDSMALAARGIDTVDILRFLAGDWHC 128 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG 195 +T + Q+ G+A A + SD + GDGA ++G Sbjct: 129 CFDPAQHRTAPQATP---------LATQLLHAAGLAHALARKGSDTAVLALCGDGATSEG 179 Query: 196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIR 255 +E+ N AA++ VI++++NN +A+ ++R S + + +G+ + + QVDG D Sbjct: 180 DFHEALNFAAVFRAPVIFLVQNNGFAISVPLARQSVAPSLAHKGIGYGMGSEQVDGNDPV 239 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQV 314 A+ A +D A Y A GP+I+E TYR GH+ DP YRT +E++E + DPI+++ Sbjct: 240 AMLAVLDAAREYVLAGNGPVIVEAHTYRMSGHTNADDPLRYRTDDELDEWLAR-DPIQRL 298 Query: 315 RKRL 318 L Sbjct: 299 EIHL 302 >gi|325570612|ref|ZP_08146338.1| pyruvate dehydrogenase complex E1 component alpha subunit [Enterococcus casseliflavus ATCC 12755] gi|325156458|gb|EGC68638.1| pyruvate dehydrogenase complex E1 component alpha subunit [Enterococcus casseliflavus ATCC 12755] Length = 369 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 81/298 (27%), Positives = 138/298 (46%), Gaps = 17/298 (5%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + + + + D ++ YR+ ++ Sbjct: 54 MVWSRVLDQRSTALNRQGRLGFFAP-TTGQEASQLASQFAFEKEDVLLPGYRDVPQLIQH 112 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ + G G +++ I+GAQ G+A K R Sbjct: 113 GLPLKEAFLWSRGHVAG---------NLYPEDLKALPPQIIIGAQYVQAAGVALGLKKRN 163 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + GDG ++QG YE+ N A ++ N ++ I+NN +A+ T SA +++ Sbjct: 164 KKNVVFTYTGDGGSSQGDFYEAINFAGAYHANAVFYIQNNGFAISTPREVQSAAPTLAQK 223 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 + IPG+QVDGMD AV A + GP++IE LTYRY H++S DP YR Sbjct: 224 AAAAGIPGIQVDGMDPLAVYYVSKAAREWAANGNGPVLIETLTYRYGPHTLSGDDPTRYR 283 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +++ +E + DP+ + R L W+ E + + IE +I A++D+ P Sbjct: 284 SKDMDSEWQ-QKDPLVRFRTYLTEKGLWSEEKEEQVIEQTKEEI---KAAIAEADRVP 337 >gi|256824332|ref|YP_003148292.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component subunit alpha [Kytococcus sedentarius DSM 20547] gi|256687725|gb|ACV05527.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Kytococcus sedentarius DSM 20547] Length = 371 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 90/323 (27%), Positives = 153/323 (47%), Gaps = 34/323 (10%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ YR M+L RRF+++A L G + + GQ+A V +L E D YR+ Sbjct: 41 LALYRGMVLGRRFDKQATALTKQGRLAVYPS-SYGQDACQVATVQALREDDWFFPTYRDS 99 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS-----LG 167 ++ G+D +++ L G ++ G+ + + + L Sbjct: 100 MALVTRGIDPVQVLTLLKG--------------------DWHAGYDVAATRTAPQCTPLA 139 Query: 168 TGI-----AFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 T + A A R+ V+ F GDGA ++G +E N AA++N V++V++NN YA Sbjct: 140 TQLIHAAGAGAGAARKGSDAAVLAFIGDGATSEGDFHEGLNFAAVFNAPVVFVVQNNTYA 199 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + +S+ + + + +G+ + IP QVDG D AV A MD A+A R+ GP ++E+ T Sbjct: 200 ISVPLSKQTKAPSLAYKGIGYGIPSEQVDGNDAAAVAAVMDSALARARSGGGPTLVELHT 259 Query: 282 YRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YR H+ +D A YR +E+ E DPI ++ + LL E ++EI + Sbjct: 260 YRLDAHTNADDATRYRASDEV-EGWLTKDPIVRLEQYLLATGALDEARIEEIRAEGEEQS 318 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 + +D E P +L+ + Sbjct: 319 AALRDRMNADVEHQPLDLFDHVF 341 >gi|116617849|ref|YP_818220.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096696|gb|ABJ61847.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 378 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 17/316 (5%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 E FE +E + E ++ + M+L R+ + ++ +L G G F GQEA + + Sbjct: 41 EAFERAELSNEDLINIIKRMILSRQLDIRSTKLAKQGRFGFFAPTA-GQEASQMASSYAF 99 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN----GFYG 155 + D ++ YR+ I+ G K + G G ++++T++ + Sbjct: 100 NDDDWLMPGYRDIPQIVVKGWPIWKAILWSRGHVLG---------NVYTTEDDKPVNSWM 150 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 I+GAQ GIA K R + + GDG +QG YE N A +N N ++ + Sbjct: 151 PQIIIGAQYVEAAGIALGLKKRGKNAVVYAYTGDGGTSQGDFYEGINFAGAYNANAVFFV 210 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +NN YA+ T + +A + + +G + +P + VDG D AV +A A+ GP+ Sbjct: 211 QNNGYAISTPRALQTAAPHLAAKGWAAGLPSLVVDGNDPIAVYLASKEARAWAANGNGPV 270 Query: 276 IIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 +IE +T R HS + DP YRT+++I E +P+ ++RK L +E + Sbjct: 271 LIETITNRLEAHSTAGDDPLRYRTKDDIGEWWK-KEPLIRMRKLLQGQGIWNEEQEDDYV 329 Query: 334 MNVRKIINNSVEFAQS 349 V ++I++ ++ A S Sbjct: 330 KEVNQLIDDQIKIADS 345 >gi|258575165|ref|XP_002541764.1| 2-oxoisovalerate dehydrogenase alpha subunit [Uncinocarpus reesii 1704] gi|237902030|gb|EEP76431.1| 2-oxoisovalerate dehydrogenase alpha subunit [Uncinocarpus reesii 1704] Length = 448 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 14/293 (4%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + VG +L+ D + YRE G G + M++L + KG+ Sbjct: 121 FYMVSAGEEGIAVGSAAALSPDDVVFAQYRETGVFQQRGFSLKEFMSQLFANKNDNGKGR 180 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQ 194 +H T + + Q+ +G A+A K + + +I FG+GAA++ Sbjct: 181 NMPVHYGGTNVRAHTISSTLATQIPQASGAAYALKLKTLQNPNVAPQIVACYFGEGAASE 240 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + V+++ NN YA+ T + RGV + I ++VDG DI Sbjct: 241 GDFHAALNIAATRSCPVVFICRNNGYAISTPTLEQYRGDGIASRGVGYGIDTIRVDGNDI 300 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV+ +A + G PI+IE ++YR HS SD + YR R E+ + + +PI Sbjct: 301 FAVREVTKQARRMALENGGRPILIEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIT 360 Query: 313 QVRKRLLHNKWASEGDL-KEIEMNVRKIINNSVEFAQSDKEPDPA--ELYSDI 362 ++RK + NK DL +E +RK + EFA +++E PA EL++D+ Sbjct: 361 RLRK-WMENKGIWNEDLERETREQLRKAVLK--EFAAAEREQKPAIKELFTDV 410 >gi|239930129|ref|ZP_04687082.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291438469|ref|ZP_06577859.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces ghanaensis ATCC 14672] gi|291341364|gb|EFE68320.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces ghanaensis ATCC 14672] Length = 380 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 138/301 (45%), Gaps = 12/301 (3%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR+ +A L G + + GQEA V + L E D + +YR+ ++A GVD Sbjct: 61 RRYNAQATALTKQGRLAVYPS-STGQEACEVAAALVLEERDWLFPSYRDTLAVVARGVDP 119 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 + LT +G G H + + + Q+ G+A A + + D + Sbjct: 120 VEA---LTLLRGDWHTGYDPYEHRVAPLST------PLATQLPHAVGLAHAARLKGDDVV 170 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 + GDG ++G +E+ N AA+W V++ ++NN +A+ +++ +A + + + V + Sbjct: 171 ALALVGDGGTSEGDFHEALNFAAVWQAPVVFFVQNNGFAISVPLAKQTAAPSLAHKAVGY 230 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEI 301 +PG VDG D AV + AV + RA GP ++E +TYR H+ +D A YR E+ Sbjct: 231 GMPGRLVDGNDAAAVHEVLADAVRHARAGGGPTLVEAITYRVEAHTNADDATRYRGDAEV 290 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 E HDPI + + L E + + + + D DP +L++ Sbjct: 291 -ETWKQHDPIVLLERELTARGLLDEDGIDAARRDAETMAASLRAHMNQDPALDPMDLFTH 349 Query: 362 I 362 + Sbjct: 350 V 350 >gi|85708446|ref|ZP_01039512.1| 2-oxoisovalerate dehydrogenase alpha subunit [Erythrobacter sp. NAP1] gi|85689980|gb|EAQ29983.1| 2-oxoisovalerate dehydrogenase alpha subunit [Erythrobacter sp. NAP1] Length = 434 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 82/297 (27%), Positives = 147/297 (49%), Gaps = 10/297 (3%) Query: 59 MLLIRRFEEKA--GQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 M L R F+E+ GQ G F C G+EA + M+L D + +YR+ G ++ Sbjct: 95 MALTRAFDERMFRGQRQGKT---SFYMKCTGEEATSISAAMALASDDMVFPSYRQQGILI 151 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 A G +++ ++ +G KG+ + S ++ F+ G + Q G A A+ Sbjct: 152 ARGYPLIEMINQIYSNKGDKLKGRQLPIMYSSREHSFFSISGNLATQTPQAVGWAMASAI 211 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA-SAQTNF 235 + +I G+G+ +G + + A ++N VI + NNQ+A+ + A S +T F Sbjct: 212 KGDSRIAATWVGEGSTAEGDFHSACTFATVYNAPVILNVINNQWAISSFSGFAGSERTTF 271 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + R + + + G++VDG D A A A RA++GP +IE TYR GHS S DP+ Sbjct: 272 AARALGYGLAGLRVDGNDALACFAAQQWAANRARANQGPTLIEYFTYRAEGHSTSDDPSG 331 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 YR+ +E E DP+ +++ L+ +W E K +++ +++ + + A+ + Sbjct: 332 YRSAQEREEWPLG-DPVMRLKNHLIAIGEWDEERQEK-MDLEAAELVKKTTKEAEKN 386 >gi|325965167|ref|YP_004243073.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component subunit alpha [Arthrobacter phenanthrenivorans Sphe3] gi|323471254|gb|ADX74939.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Arthrobacter phenanthrenivorans Sphe3] Length = 412 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 81/278 (29%), Positives = 132/278 (47%), Gaps = 29/278 (10%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M IRRF+ +A L G + + L GQEA +G + D + YREHG Sbjct: 66 YADMAAIRRFDVEATALQRQGQLALWVPLT-GQEAAQIGSGRASQPQDYIFPTYREHGVA 124 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L VD ++++ + G G K + H+++ ++ AQ G +A Sbjct: 125 LTRNVDLAELLRQFRGVSNGGWNPKDTNFHLYTL---------VLAAQTLHAVG--YAMG 173 Query: 176 YRRSDKI--------------CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 +R K+ + FGDGA+++G V+ES A+ +N V++ +NN +A Sbjct: 174 IQRDQKLAAATGAAGAGEDAAVIAYFGDGASSEGDVHESMVFASSYNAPVVFFCQNNHWA 233 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + + + S R + PG++VDG D+ AV A + A+ + R KGP++IE T Sbjct: 234 ISVPTN-VQTRVPLSNRAKGYGFPGIRVDGNDVIAVHAVTEWALEHARQGKGPVLIEAFT 292 Query: 282 YRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 YR H+ + DP YR E + R+ DP+ ++ K L Sbjct: 293 YRVGAHTTADDPTKYRESAEEDAWRAK-DPLSRLEKYL 329 >gi|308176761|ref|YP_003916167.1| pyruvate dehydrogenase E1 component subunit alpha [Arthrobacter arilaitensis Re117] gi|307744224|emb|CBT75196.1| pyruvate dehydrogenase E1 component subunit alpha [Arthrobacter arilaitensis Re117] Length = 371 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 85/272 (31%), Positives = 138/272 (50%), Gaps = 14/272 (5%) Query: 49 KEQELSAY-RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE +L+ + R M+++RR + +A L G +G + L +GQEA +G + + D + Sbjct: 42 KEADLADFLRDMVVLRRMDNEATALQRQGQLGLWAPL-LGQEAAQIGSVRATEDDDFIFP 100 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YREHG A GV A +++ G Q S +++ + ++G+Q Sbjct: 101 SYREHGVAWARGVKAEDLLSVWRGAQA--SGWDPNEVNIACQQI-------VIGSQALHA 151 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G K+ ++ V FGDGA +QG V E+ AA + V++ +NNQ+A+ V Sbjct: 152 AGYGMGIKFDGGKQVSVAYFGDGATSQGDVNEAMVFAASYQAPVLFFCQNNQWAISEPVH 211 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 S +T + R F + +VDG DI AV A A+ + R GP IE +TYR H Sbjct: 212 LQS-RTQIADRAHGFGLKTWRVDGNDILAVYAATKAALNHARNGLGPTFIEAVTYRMGSH 270 Query: 288 SMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 + + DP YR E++ E ++ DPI+++ K L Sbjct: 271 TTADDPTRYRKNEQLEEWKAK-DPIDRLVKYL 301 >gi|196247800|ref|ZP_03146502.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. G11MC16] gi|196212584|gb|EDY07341.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. G11MC16] Length = 369 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 85/293 (29%), Positives = 138/293 (47%), Gaps = 14/293 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + EQ R M+ R ++++ L G +G F GQEA + +L + D Sbjct: 39 MPDLSDEQLKELMRRMVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQIASHFALEKED 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + S+G + N I+GAQ Sbjct: 98 FILPGYRDVPQLVWHGLPLYQAFL--------FSRGHFHGNQIPEDVNAL-PPQIIIGAQ 148 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K R + + GDG +QG YE N A + I+V++NN++A+ Sbjct: 149 YIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAIS 208 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T V + + +++ V+ IPG+QVDGMD AV A + A +GP +IE L +R Sbjct: 209 TPVEKQTVAKTLAQKAVAAGIPGIQVDGMDALAVYAAVKAARERAINGEGPTLIETLCFR 268 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDLKEIE 333 Y H+MS DP YR++E NE + DP+ + RK L W+ E + + IE Sbjct: 269 YGPHTMSGDDPTRYRSKELENEW-AKKDPLVRFRKFLEAKGLWSEEEENRVIE 320 >gi|23098867|ref|NP_692333.1| pyruvate dehydrogenase E1 alpha subunit [Oceanobacillus iheyensis HTE831] gi|22777094|dbj|BAC13368.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Oceanobacillus iheyensis HTE831] Length = 360 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 91/321 (28%), Positives = 148/321 (46%), Gaps = 25/321 (7%) Query: 31 VDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEA 90 V+ D+P L E+ E R M+ R ++++ L G +G F GQEA Sbjct: 25 VNKDDMPDLSDDELKEI--------MRRMVYTRILDQRSTALNRQGRLG-FYAPTAGQEA 75 Query: 91 VIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK 150 +G + +L + D ++ YR+ ++ G+ + G G + + + Sbjct: 76 SQLGSQFALEKEDFILPGYRDVPQLIWQGLPLYQAFLFSKGHFHG---------NQYPDE 126 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 I+GAQ G+A K R + + + GDG +QG YE N A + Sbjct: 127 LRALSPQIIIGAQYVQTAGVALGIKKRGNKNVAITYTGDGGTSQGDFYEGINFAGAYKAP 186 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 I+V++NN++A+ V + + +++ V+ I G+QVDGMD+ AV A A Sbjct: 187 AIFVVQNNRFAISVPVEKQTNAKTLAQKAVAAGIEGIQVDGMDVLAVYAATKFARERAVN 246 Query: 271 HKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEG 327 +GP +IE LTYR+ H++S DP YRT + NE DPI + R L K W+ E Sbjct: 247 GEGPTLIETLTYRFGPHTLSGDDPTRYRTEDMDNEW-EKKDPIVRFRTYLESKKLWSEED 305 Query: 328 DLKEIEM---NVRKIINNSVE 345 + IE +++K I + E Sbjct: 306 ENNAIEQAKEDIKKAIKQAEE 326 >gi|296170433|ref|ZP_06852021.1| pyruvate dehydrogenase complex E1 component [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894904|gb|EFG74625.1| pyruvate dehydrogenase complex E1 component [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 366 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 83/264 (31%), Positives = 130/264 (49%), Gaps = 12/264 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y +M++ R + + L G +G F C GQEA VG L + D + YRE G Sbjct: 44 YEMMVVTRELDTEFVNLKRQGELGLFAS-CRGQEAAQVGAVACLRKTDWLFPQYRELGAY 102 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G+ G G + +G F TK +G Q G A A + Sbjct: 103 LVRGIPP--------GHVGAVWRGTWHGGLEF-TKKCCAPTSIPIGTQALHAVGAAMAAQ 153 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 D + V GDGA + G V+E+ N AA++ ++ ++NNQ+A+ + + + + Sbjct: 154 RLGEDSVTVAFLGDGATSVGDVHEALNFAAVFATPCVFFVQNNQWAISVPIHKQTKAPSI 213 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + + + + +PG++VDG D+ A A M +A A RA GP +IE +TYR H+ S DP+ Sbjct: 214 AHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEAVTYRLGPHTTSDDPSR 273 Query: 295 YRTREEINEMRSNHDPIEQVRKRL 318 YRT+EE++ + DPI + R L Sbjct: 274 YRTQEEVDRW-AALDPIPRYRTYL 296 >gi|215404433|ref|ZP_03416614.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis 02_1987] gi|289746279|ref|ZP_06505657.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis 02_1987] gi|289686807|gb|EFD54295.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis 02_1987] Length = 367 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 83/265 (31%), Positives = 132/265 (49%), Gaps = 14/265 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y +M++ R + + L G + + C GQEA VG L + D + YRE G Sbjct: 48 YEMMVVTRELDTEFVNLQRQGELALYTP-CRGQEAAQVGAAACLRKTDWLFPQYRELGVY 106 Query: 116 LACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 L G+ + G GG+ F+TK I G Q G A A Sbjct: 107 LVRGIPPGHVGVAWRGTWHGGLQ---------FTTKCCAPMSVPI-GTQTLHAVGAAMAA 156 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + D + V GDGA ++G V+E+ + AA++ ++ ++NNQ+A+ VSR +A + Sbjct: 157 QRLDEDSVTVAFLGDGATSEGDVHEALDFAAVFTTPCVFYVQNNQWAISMPVSRQTAAPS 216 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + + + + +PG++VDG D+ A A M +A A RA GP +IE +TYR H+ + DP Sbjct: 217 IAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEAVTYRLGPHTTADDPT 276 Query: 294 NYRTREEINEMRSNHDPIEQVRKRL 318 YR++EE++ + DPI + R L Sbjct: 277 RYRSQEEVDRW-ATLDPIPRYRTYL 300 >gi|315107887|gb|EFT79863.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL030PA1] Length = 351 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 86/267 (32%), Positives = 131/267 (49%), Gaps = 9/267 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + A +M++ RR + +A L G +G + L +GQEA G ++L EGDQ+ YRE Sbjct: 27 VKALEMMVMTRRLDVEATALQRHGELGLWPPL-LGQEATQAGAWLALREGDQVFPTYREQ 85 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G A GV +A++ G G S ++ + G G + A V G+ Sbjct: 86 GLAHAMGVS----LADILGAWDGTSHCGWDTVATHFSAYPVMIGSGTLHA-VGYAMGVQR 140 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 + + GDGA ++G E++ AA N V++V NNQ+A+ + S Sbjct: 141 DVEAGGGPAAVLDFHGDGAMSEGDTNEAYVFAASMNAPVVFVCVNNQWAISEPTTVQSPT 200 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-D 291 + F +R F IP +QVDG D+ A+ A + A+ Y R+ KGP+ +E TYR H+ + D Sbjct: 201 SLF-RRATGFGIPAVQVDGNDVIAMMAVLRSALEYARSGKGPVFVEAWTYRMGAHTTTDD 259 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRL 318 P YRT EE DPI ++R L Sbjct: 260 PTRYRTAEE-ESTWGKTDPIVRLRTYL 285 >gi|257868007|ref|ZP_05647660.1| pyruvate dehydrogenase [Enterococcus casseliflavus EC30] gi|257802090|gb|EEV30993.1| pyruvate dehydrogenase [Enterococcus casseliflavus EC30] Length = 372 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 81/298 (27%), Positives = 138/298 (46%), Gaps = 17/298 (5%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + + + + D ++ YR+ ++ Sbjct: 57 MVWSRVLDQRSTALNRQGRLGFFAPTA-GQEASQLASQFAFEKEDVLLPGYRDVPQLIQH 115 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ + G G +++ I+GAQ G+A K R Sbjct: 116 GLPLKEAFLWSRGHVAG---------NLYPEDLKALPPQIIIGAQYVQAAGVALGLKKRN 166 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + GDG ++QG YE+ N A ++ N ++ I+NN +A+ T SA +++ Sbjct: 167 KKNVVFTYTGDGGSSQGDFYEAINFAGAYHANAVFYIQNNGFAISTPREVQSAAPTLAQK 226 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 + IPG+QVDGMD AV A + GP++IE LTYRY H++S DP YR Sbjct: 227 AAAAGIPGIQVDGMDPLAVYYVSKAAREWAANGNGPVLIETLTYRYGPHTLSGDDPTRYR 286 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +++ +E + DP+ + R L W+ E + + IE +I A++D+ P Sbjct: 287 SKDMDSEWQ-QKDPLVRFRTYLTEKGLWSEEKEEQVIEQTKEEI---KAAIAEADRVP 340 >gi|281340716|gb|EFB16300.1| hypothetical protein PANDA_012922 [Ailuropoda melanoleuca] Length = 409 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 88/321 (27%), Positives = 143/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L YR M L+ + + G + F G+E VG +L Sbjct: 57 EDPHLPQEKVLKFYRSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 115 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 116 DLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDLGKGRQMPVHYGCRERHFVTISSPLAT 175 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 176 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 235 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 236 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 295 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R L W + K RK + Sbjct: 296 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLQSRGWWDDEQEKAWRKQSRKKVM 355 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P+ L+SD+ Sbjct: 356 EAFEQAERKPKPNPSLLFSDV 376 >gi|167645834|ref|YP_001683497.1| 3-methyl-2-oxobutanoate dehydrogenase [Caulobacter sp. K31] gi|167348264|gb|ABZ70999.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Caulobacter sp. K31] Length = 409 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 83/300 (27%), Positives = 140/300 (46%), Gaps = 8/300 (2%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E L+ R MLL R F+E+ + + G F G+EA+ + L D Y Sbjct: 75 ETLLAGQRAMLLTRAFDERLFRAHRQGKTS-FYMKSTGEEAIGAAQSLFLDRDDMCFPTY 133 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R ++A + ++ KG+ + + K GFY G VG++ G Sbjct: 134 RVLSWLMARNYPLIDLCNQIFSNANDPLKGRQLPILYSARKYGFYSLSGNVGSRFGHAVG 193 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 A A+ ++ D I + G+G +G +E+ A+++ I + NNQ+A+ + A Sbjct: 194 WAMASAFKGGDSIALAYIGEGTTAEGDFHEALTFASVYRAPAILCVTNNQWAISSFSGIA 253 Query: 230 SA-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 A +T F+ + +++ +PG++VDG D AV A + A R + G +IE+ TYR GHS Sbjct: 254 GANETTFAAKALAYGLPGLRVDGNDFLAVWAATEWAAERARLNLGATLIELYTYRASGHS 313 Query: 289 MS-DPANYRTREEINEMRSNHDPIEQVRKRLLH-NKWASE---GDLKEIEMNVRKIINNS 343 S DP YR +E E DP+E+++ L+ W E + E++ VR + + Sbjct: 314 TSDDPTKYRPADEA-EAWPLGDPVERLKTHLIRLGAWDEERHAALIAELDAEVRAAVKEA 372 >gi|257874337|ref|ZP_05653990.1| pyruvate dehydrogenase [Enterococcus casseliflavus EC10] gi|257876903|ref|ZP_05656556.1| pyruvate dehydrogenase [Enterococcus casseliflavus EC20] gi|257808501|gb|EEV37323.1| pyruvate dehydrogenase [Enterococcus casseliflavus EC10] gi|257811069|gb|EEV39889.1| pyruvate dehydrogenase [Enterococcus casseliflavus EC20] Length = 369 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 81/298 (27%), Positives = 138/298 (46%), Gaps = 17/298 (5%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + + + + D ++ YR+ ++ Sbjct: 54 MVWSRVLDQRSTALNRQGRLGFFAPTA-GQEASQLASQFAFEKEDVLLPGYRDVPQLIQH 112 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ + G G +++ I+GAQ G+A K R Sbjct: 113 GLPLKEAFLWSRGHVAG---------NLYPEDLKALPPQIIIGAQYVQAAGVALGLKKRN 163 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + GDG ++QG YE+ N A ++ N ++ I+NN +A+ T SA +++ Sbjct: 164 KKNVVFTYTGDGGSSQGDFYEAINFAGAYHANAVFYIQNNGFAISTPREVQSAAPTLAQK 223 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 + IPG+QVDGMD AV A + GP++IE LTYRY H++S DP YR Sbjct: 224 AAAAGIPGIQVDGMDPLAVYYVSKAAREWAANGNGPVLIETLTYRYGPHTLSGDDPTRYR 283 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +++ +E + DP+ + R L W+ E + + IE +I A++D+ P Sbjct: 284 SKDMDSEWQ-QKDPLVRFRTYLTEKGLWSEEKEEQVIEQTKEEI---KAAIAEADRVP 337 >gi|90108861|pdb|2BFF|A Chain A, Reactivity Modulation Of Human Branched-Chain Alpha- Ketoacid Dehydrogenase By An Internal Molecular Switch Length = 400 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 88/321 (27%), Positives = 142/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 106 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 107 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 167 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 227 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+ PI ++R LL W E K R+ + Sbjct: 287 RIGHHSTSDDSSAYRSVDEVGYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 346 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 347 EAFEQAERKPKPNPNLLFSDV 367 >gi|326405656|gb|ADZ62727.1| pyruvate dehydrogenase E1 component subunit alpha [Lactococcus lactis subsp. lactis CV56] Length = 374 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 84/285 (29%), Positives = 138/285 (48%), Gaps = 17/285 (5%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 +G + + + E+ + ++ ML R+ + ++ +L G +G F GQEA + + Sbjct: 37 DGLKRAGLSDEKLVELFKSMLFARQVDIRSMKLAKQGRMGFFGPHA-GQEASQMASSFAF 95 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG----FYG 155 T+ D + YR+ I A G K + G Q G + ++T +G + Sbjct: 96 TDEDWLFPGYRDLPQIYAKGWPIWKGLLWSRGHQLG---------NEYTTDDGKPVNSWF 146 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 I+GAQ G+A K R+ D + V GDG ++QG YE N A + ++ I Sbjct: 147 PQIIIGAQYVEAAGVALGLKKRKKDAVAFVYTGDGGSSQGDTYEGINFAGAYKAPLVAFI 206 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +NN YA+ T S SA + + +G + P + VDGMD A+ +A A+ A GP+ Sbjct: 207 QNNGYAISTPRSLQSAAPHLAAKGWAAGAPSIVVDGMDAIAMYLASKEARAWAVAGNGPV 266 Query: 276 IIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +IE +T R HS + DP YRT+E+I E +P+ ++R L Sbjct: 267 VIEAITNRLEPHSTAGDDPLRYRTKEDI-EAWWKKEPLVRMRNFL 310 >gi|229822444|ref|YP_002883970.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Beutenbergia cavernae DSM 12333] gi|229568357|gb|ACQ82208.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Beutenbergia cavernae DSM 12333] Length = 411 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 88/282 (31%), Positives = 130/282 (46%), Gaps = 17/282 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ E YR M+L+R F+ +A L G +G +GQE +G +L D Sbjct: 65 IAHLTDEDLRGMYRDMVLVRAFDSEATSLQRQGELG-LWPPSLGQEGAQIGSGRALAAQD 123 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +YREHG GVD +I+ G G G + H + G H + A Sbjct: 124 YVFPSYREHGVAHTKGVDLRRILRLYRGIDHG---GWDPAEHNYHLATLVIGAHALHAAG 180 Query: 164 VSLG------TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 ++G G A + D+ V FGDGA QG V E+ AA N V++ +N Sbjct: 181 YAMGIQRDGDVGTGDAGR----DRAVVAYFGDGATAQGDVNEALVFAATANAPVVFFCQN 236 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 NQ+A+ ++ S + +RG F IP ++VDG D+ A A +A+ + GP I Sbjct: 237 NQWAI-SAPSSVQTRVPLVQRGGGFGIPSVRVDGNDVLASYAVTAEALERAHSGGGPTFI 295 Query: 278 EMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 E +TYR H+ S DP YR + E R DPI ++R L Sbjct: 296 EAVTYRMGAHTTSDDPTRYREQAEEERWRGR-DPISRLRALL 336 >gi|85373858|ref|YP_457920.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Erythrobacter litoralis HTCC2594] gi|84786941|gb|ABC63123.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Erythrobacter litoralis HTCC2594] Length = 429 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 62 IRRFEEKA--GQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACG 119 +R F+E+ GQ G F C G+EA V M+L D + +YR+ G ++A G Sbjct: 93 VRAFDERMFRGQRQGKT---SFYMKCTGEEATSVSAAMALASDDMVFPSYRQQGVLIARG 149 Query: 120 VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 +++ ++ + KG+ + S ++ F+ G + Q G A A+ + Sbjct: 150 YPMIEMINQIYSNKADKLKGRQLPIMYSSREHSFFSISGNLATQTPQAVGWAMASAIKND 209 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKR 238 +I G+G+ +G + + A ++N VI + NNQ+A+ + A A+ T F+ R Sbjct: 210 SRIAATWVGEGSTAEGDFHSACTFATVYNAPVIINVINNQWAISSFSGFAGAERTTFAAR 269 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRT 297 + + + G++VDG D AV A A RA++GP +IE TYR GHS S DP+ YR+ Sbjct: 270 ALGYGLAGLRVDGNDPLAVYAAERWAANRARANQGPTLIEFFTYRAEGHSTSDDPSGYRS 329 Query: 298 REEINEMRSNHDPIEQVRKRLL 319 +E E DPI +++ L+ Sbjct: 330 AQEREEWPLG-DPINRLKNHLI 350 >gi|326384370|ref|ZP_08206051.1| pyruvate dehydrogenase E1 component alpha subunit [Gordonia neofelifaecis NRRL B-59395] gi|326196968|gb|EGD54161.1| pyruvate dehydrogenase E1 component alpha subunit [Gordonia neofelifaecis NRRL B-59395] Length = 358 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 86/279 (30%), Positives = 133/279 (47%), Gaps = 13/279 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M+++RR + +A L G +G + L +GQEA +G +L D + +YREHG Sbjct: 39 YEDMVVVRRIDAEATALQRQGQLGLWAPL-LGQEAAQIGSARALEPDDFVFPSYREHGVA 97 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GV+ ++M G + G H ++ I+GAQ G Sbjct: 98 YCRGVELKEMMPFWRG-----TSLSGWDPHRYNIATPAI----IIGAQTLHAAGYGMGID 148 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + + + FGDGA +QG V E+ AA + V++ +NNQ+A+ V+ + + Sbjct: 149 FDGDNSAVITYFGDGATSQGDVSEAMGFAASFAAPVVFFCQNNQWAISEPVTLQT-RAPI 207 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + RG + +P ++VDG D+ AV A A+ R GP +IE +TYR H+ S DP Sbjct: 208 AHRGRGYGMPTVRVDGNDVLAVLAVTRAALELAREGGGPTLIEAVTYRRGPHTTSDDPTR 267 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 YR + E DPIE++R L S+ D K IE Sbjct: 268 YRAPADDAEW-IRRDPIERIRLLLEAAGALSDEDAKTIE 305 >gi|15672044|ref|NP_266218.1| PDH E1 component alpha subunit [Lactococcus lactis subsp. lactis Il1403] gi|281490536|ref|YP_003352516.1| pyruvate dehydrogenase E1 component subunit alpha [Lactococcus lactis subsp. lactis KF147] gi|12722903|gb|AAK04160.1|AE006244_9 PDH E1 component alpha subunit [Lactococcus lactis subsp. lactis Il1403] gi|281374354|gb|ADA63887.1| Pyruvate dehydrogenase E1 component, alpha subunit [Lactococcus lactis subsp. lactis KF147] Length = 374 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 86/294 (29%), Positives = 141/294 (47%), Gaps = 18/294 (6%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 +G + + + E+ + ++ ML R+ + ++ +L G +G F GQEA + + Sbjct: 37 DGLKRAGLSDEKLVELFKSMLFARQVDIRSMKLAKQGRMGFFGPHA-GQEASQMASSFAF 95 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG----FYG 155 T+ D + YR+ I A G K + G Q G + ++T +G + Sbjct: 96 TDEDWLFPGYRDLPQIYAKGWPIWKGLLWSRGHQLG---------NEYTTDDGKPVNSWF 146 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 I+GAQ G+A K R+ D + V GDG ++QG YE N A + ++ I Sbjct: 147 PQIIIGAQYVEAAGVALGLKKRKKDAVAFVYTGDGGSSQGDTYEGINFAGAYKAPLVAFI 206 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +NN YA+ T S SA + + +G + P + VDGMD A+ +A A+ A GP+ Sbjct: 207 QNNGYAISTPRSLQSAAPHLAAKGWAAGAPSIVVDGMDAIAMYLASKEARAWAVAGNGPV 266 Query: 276 IIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASE 326 +IE +T R HS + DP YRT+E+I E +P+ ++R L W +E Sbjct: 267 VIEAITNRLEPHSTAGDDPLRYRTKEDI-EAWWKKEPLVRMRNFLTEKGLWDTE 319 >gi|108862265|gb|ABG21900.1| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor, putative, expressed [Oryza sativa Japonica Group] Length = 436 Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 83/304 (27%), Positives = 137/304 (45%), Gaps = 2/304 (0%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 + G E +KE L Y M ++ + + G + F G+EA+ + + Sbjct: 132 ISGSRFQEVSKELALKMYNEMATLQVMDTIFFEAQRQGRIS-FYLTSHGEEAINIASAAA 190 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 LT D ++ YRE G +L G + + G + KG+ +H S + ++ Sbjct: 191 LTIDDIVLPQYREPGVLLWRGFTLQEFANQCFGNKLDYGKGRQMPIHYGSNRLNYFTVSS 250 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + Q+ G A++ K + D + FGDG ++G + + N AA+ VI+ NN Sbjct: 251 PIATQLPHAVGAAYSLKMDKKDACAITYFGDGGTSEGDFHAALNFAAVMEAPVIFFCRNN 310 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +A+ T S RG ++ + ++VDG D AV + + A PI++E Sbjct: 311 GWAISTPTSEQFRSDGAVIRGQAYGMRSIRVDGNDALAVYSAVHTAREMAIKEGRPILVE 370 Query: 279 MLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 LTYR HS SD + YR +EI R+ DPI + RK + N W + D E+ NVR Sbjct: 371 ALTYRVGHHSTSDDSTKYRPVDEIEHWRTARDPISRYRKWVQGNGWWCDEDESELRNNVR 430 Query: 338 KIIN 341 + + Sbjct: 431 QEVT 434 >gi|302535523|ref|ZP_07287865.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sp. C] gi|302444418|gb|EFL16234.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sp. C] Length = 381 Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 77/301 (25%), Positives = 143/301 (47%), Gaps = 12/301 (3%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR+ +A L G + + +GQEA + + L E D + +YR+ +A G+D Sbjct: 68 RRYNAQATALTRQGRLAVYPS-TVGQEAAEIAAALVLEEQDWLFPSYRDTLAAVARGLDP 126 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 + LT +G G H + + Q+ G+A A + R + + Sbjct: 127 VQA---LTLLRGDWHTGYDPREHRIAPLCT------PLATQLPHAVGLAHAARLRGDEVV 177 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 + GDG ++G +E+ N AA+W V+++++NN +A+ +++ +A + + V + Sbjct: 178 ALAMVGDGGTSEGDFHEALNFAAVWQAPVVFLVQNNGFAISVPLAKQTAAPTLAHKAVGY 237 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEI 301 +PG VDG D+ A+ + +AV R GP +IE +TYR H+ +D A YRT E+ Sbjct: 238 GMPGRLVDGNDVAAMHEVLTEAVKRARTGGGPTLIEAVTYRMEAHTNADDATRYRTDAEV 297 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 ++ HDP++ + + L E ++E + + E +D DP +L++ Sbjct: 298 EAWKA-HDPVQLLERELTARGILDEEGIREARDAAEAMAADLRERMNADPVTDPMDLFAH 356 Query: 362 I 362 + Sbjct: 357 V 357 >gi|296283920|ref|ZP_06861918.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Citromicrobium bathyomarinum JL354] Length = 430 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 83/282 (29%), Positives = 138/282 (48%), Gaps = 13/282 (4%) Query: 61 LIRRFEEK--AGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 L+R F+E+ GQ G F C G+EA + M+L D + +YR+ G ++A Sbjct: 94 LVRAFDERMFRGQRQGKT---SFYMKCTGEEATSISTSMALQSDDMVFPSYRQQGVLIAR 150 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G +++ ++ G KG+ + S ++ F+ G + QV G A A+ + Sbjct: 151 GYPLFEMINQIYSNSGDKLKGRQLPIMYSSREHSFFSISGNLATQVPQAVGWAMASAIKH 210 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA-SAQTNFSK 237 +I G+G+ +G + + A+++N VI + NNQ+A+ + A S + F+ Sbjct: 211 DTRIAATWVGEGSTAEGDFHAACTFASVYNAPVILNVINNQWAISSFSGFAGSERATFAS 270 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYR 296 R + + + G++VDG D A A A R + GP +IE TYR GHS S DP+ YR Sbjct: 271 RAIGYGLAGLRVDGNDPLACYAAQRWAANRARTNSGPTLIEFFTYRAEGHSTSDDPSGYR 330 Query: 297 TREEINEMRSNHDPIEQVRKRLLH-NKW----ASEGDLKEIE 333 + EE E DP+ +++ L+ +W +E DLK E Sbjct: 331 SAEE-REAWPLGDPVVRLKNHLIELGEWDEDRQAEMDLKAAE 371 >gi|302895938|ref|XP_003046849.1| hypothetical protein NECHADRAFT_83250 [Nectria haematococca mpVI 77-13-4] gi|256727777|gb|EEU41136.1| hypothetical protein NECHADRAFT_83250 [Nectria haematococca mpVI 77-13-4] Length = 454 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 98/337 (29%), Positives = 169/337 (50%), Gaps = 29/337 (8%) Query: 45 SEFNKEQELSAYRLMLLIRRFE------EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 SE E+ L Y+ ML + + ++ G+L F + G+EA++VG + Sbjct: 90 SEVTPERVLGWYKNMLTVNIMDGIMFDAQRHGRL-------SFYMVSHGEEALMVGSAAA 142 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMF-STKNGFYGGH 157 L GD + T YREHG L G + M +L G KG+ +H +K + Sbjct: 143 LDAGDVITTQYREHGVFLQRGYELKDFMCQLAGNHNDPGKGRNMPVHYSGKSKVNIHAVA 202 Query: 158 GIVGAQVSLGTGIAFANKYR------RSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 +G Q+ TG +A K ++ ++ V FG+GAA++G + + N+AA ++ V Sbjct: 203 STLGTQIPHATGAGYALKMEALENPDQAPRVAVSYFGEGAASEGDFHGALNVAATQDVPV 262 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV-KATMDKAVAYCRA 270 I++ NN +A+ T S+ + RG + I ++VDG DI AV +AT + A RA Sbjct: 263 IFICRNNGFAISTPTSQQYRGDGIAGRGAGYGIETLRVDGTDIFAVYQATKE---ARRRA 319 Query: 271 HKG---PIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRS-NHDPIEQVRKRLLHNKWAS 325 +G PI++E ++YR HS SD ++ YR+ +++ +S + P+ ++RK L H Sbjct: 320 LEGGGRPILLEFMSYRISHHSTSDDSSAYRSSSDVSYWKSDDRHPVARLRKWLEHQGVWD 379 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + E+ +RK I + A+ +K+P ++SD+ Sbjct: 380 QARDTELRAQLRKDIIRELSEAEKEKKPALRAIFSDV 416 >gi|229822755|ref|ZP_04448825.1| hypothetical protein GCWU000282_00044 [Catonella morbi ATCC 51271] gi|229787568|gb|EEP23682.1| hypothetical protein GCWU000282_00044 [Catonella morbi ATCC 51271] Length = 366 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 91/323 (28%), Positives = 144/323 (44%), Gaps = 19/323 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + E+ + M+ R E++ L G +G F GQEA +G +L D Sbjct: 36 LPDLSDEELVQLMEDMVWSRILHERSTALNRQGRLG-FYAPTFGQEASQLGSVAALKPED 94 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ K G G + + Y I+GAQ Sbjct: 95 YILPGYRDVPQLIKHGLPLHKAFLWSRGHVEG---------NNYPADFNAYPPQIIIGAQ 145 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K D + GDG ++QG YE N A + I+ I+NN +A+ Sbjct: 146 YVQAMGVALGLKKNGKDAVAATWTGDGGSSQGDFYEGINFAGAYKAPAIFFIQNNGWAIS 205 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T S SA +++ V+ IPG+QVDGMDI AV A A Y A GP++IE + YR Sbjct: 206 TPRSLQSAAPTLAQKAVAAGIPGIQVDGMDILAVYAVTKAARDYAVAGNGPVLIETMCYR 265 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKII 340 + H++S DP Y+ E R+ DP+ + R L W+ E + IE ++ + Sbjct: 266 FGPHTLSGDDPTRYQPDGVQEEWRAK-DPLIRFRTYLESKGLWSQEKEEAVIE-RTKEEV 323 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 +++ A P + SD L Sbjct: 324 KEAIKLADQ----APKQKISDFL 342 >gi|193641195|ref|XP_001950368.1| PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial-like [Acyrthosiphon pisum] Length = 403 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 80/277 (28%), Positives = 135/277 (48%), Gaps = 2/277 (0%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EA +G L D + YRE G +L G K M + G + KGK +H Sbjct: 99 GEEAAQIGSAAGLHVNDLVYAQYREAGVLLFRGYTPEKFMNQCFGNVDDLGKGKQMPVHY 158 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 S + F + Q+ G A++ K + ++ +V FG+GAA++G + +FN A+ Sbjct: 159 GSKNHNFVTLSSPLTTQLPQAVGSAYSFKRLKINRCTIVYFGEGAASEGDAHAAFNFAST 218 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 + +I+ NN YA+ T + RG + I ++VDG DI AV + KA Sbjct: 219 LDCPIIFFCRNNGYAISTPANEQYRGDGIVSRGPGYGIATIRVDGNDILAVYNAIIKARE 278 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 Y + P+I+E +TYR HS SD + YR+++EI E + +PI + ++ L N + Sbjct: 279 YVMNNTRPLILEAMTYRRGHHSTSDDSTAYRSKDEIKEWL-DKNPIIRFKRLLEKNNLWN 337 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + + E +K + S A +P+ E+++D+ Sbjct: 338 DQNEVEYANETKKQLMQSFTIASKKNKPNWREMFNDV 374 >gi|183983819|ref|YP_001852110.1| pyruvate dehydrogenase E1 component (alpha subunit) PdhA [Mycobacterium marinum M] gi|183177145|gb|ACC42255.1| pyruvate dehydrogenase E1 component (alpha subunit) PdhA [Mycobacterium marinum M] Length = 363 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 80/265 (30%), Positives = 130/265 (49%), Gaps = 14/265 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y +M++ R + + L G + F C GQEA VG L + D + YRE G Sbjct: 44 YEMMVVTRELDAEFINLKRQGELALFAS-CRGQEAAQVGATACLRKTDWLFPQYRELGAY 102 Query: 116 LACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 L G+ + A G GG+ K + +G Q G A A Sbjct: 103 LVRGIPPGHVGAAWRGTWHGGLEFTKKCCAPISVP----------IGTQALHAVGAAMAA 152 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + D + V GDGA ++G V+E+ N AA+++ ++ ++NNQ+A+ VS+ +A + Sbjct: 153 QRLGEDSVTVAFLGDGATSEGDVHEALNFAAVFDAGCVFYVQNNQWAISVPVSKQTAAPS 212 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + + + + +PG++VDG D+ A A +A A R GP +IE +TYR H+ + DP Sbjct: 213 IAHKAIGYGMPGIRVDGNDVLACYAVTAEAAARARRGDGPTLIEAVTYRVGAHTTADDPG 272 Query: 294 NYRTREEINEMRSNHDPIEQVRKRL 318 YR++EE++ + DPI + R L Sbjct: 273 RYRSQEEVDHWLA-LDPISRYRSYL 296 >gi|116255144|ref|YP_770978.1| putative dehydrogenase, fusion [Rhizobium leguminosarum bv. viciae 3841] gi|115259792|emb|CAK02884.1| putative dehydrogenase, fusion [Rhizobium leguminosarum bv. viciae 3841] Length = 804 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 104/385 (27%), Positives = 156/385 (40%), Gaps = 67/385 (17%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-------CHLCIGQEAVIVGM 95 E + + E L R M++IR FE L G G G HL IGQEA VG Sbjct: 18 ERARYGDEGLLQILRDMIIIREFETILASLKGKGAYCGIEFNYKGPAHLSIGQEAAAVGA 77 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASK------------------------------- 124 SL D + ++R HG +A G+ A + Sbjct: 78 AASLEPDDHIFGSHRSHGEFIAKGLSAIRKLPDDALRLIMESHERGTLLRTVETSLQGPK 137 Query: 125 ------------IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 +++E+ R G ++G GGSMH F G Y + IVGA + TG A Sbjct: 138 TSETAENFLLLGLLSEIFMRSTGFNRGMGGSMHAFFPPFGTYPNNAIVGASAGIATGAAL 197 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAA------LW------NLNVIYVIENNQY 220 K + I V GDG+ G V+E+ N AA LW L V++ NN Y Sbjct: 198 RKKLAGASGITVANAGDGSTGCGPVWEAMNFAAMAQFETLWADAFKGGLPVLFFFTNNFY 257 Query: 221 AM-GTSVSRASAQTNFSKRGVSFN---IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 AM G ++ S+ G++ N I VDG + AV + + +GP + Sbjct: 258 AMGGQTIGETMGWDRLSRIGLAVNQQAIHAETVDGTNPLAVADAVARKRELLVQGRGPAL 317 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +++ YR GHS +D +YRT++E+ + HDPI RL + G + E+ Sbjct: 318 LDVECYRSSGHSTTDINSYRTKDEM-QAWEQHDPIILFSNRLQEAGIVTAGQVAELREQT 376 Query: 337 RKIINNSVEFAQSDKEPDPAELYSD 361 + + A P ++++D Sbjct: 377 TDRMRSITAIAVDPALTPPVDIHAD 401 >gi|52080059|ref|YP_078850.1| pyruvate dehydrogenase (E1 subunit alpha) [Bacillus licheniformis ATCC 14580] gi|52785434|ref|YP_091263.1| PdhA [Bacillus licheniformis ATCC 14580] gi|319646164|ref|ZP_08000394.1| pyruvate dehydrogenase E1 component subunit alpha [Bacillus sp. BT1B_CT2] gi|52003270|gb|AAU23212.1| pyruvate dehydrogenase (E1 alpha subunit) [Bacillus licheniformis ATCC 14580] gi|52347936|gb|AAU40570.1| PdhA [Bacillus licheniformis ATCC 14580] gi|317391914|gb|EFV72711.1| pyruvate dehydrogenase E1 component subunit alpha [Bacillus sp. BT1B_CT2] Length = 371 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 85/272 (31%), Positives = 129/272 (47%), Gaps = 16/272 (5%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 54 RRMVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQIATHFALEKEDFVLPGYRDVPQLI 112 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G+ + S+G M N I+GAQ G+A K Sbjct: 113 WHGLPLYQAFL--------FSRGHFRGNQMPDDVNAL-SPQIIIGAQYIQTAGVALGLKK 163 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R + + GDG A+QG YE N A + I+V++NN+YA+ T V + SA + Sbjct: 164 RGKQAVAITYTGDGGASQGDFYEGINFAGAYKAPAIFVVQNNRYAISTPVEKQSAAQTIA 223 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPAN 294 ++ + I G+QVDGMD AV A +A +GP +IE L +RY H+M+ DP Sbjct: 224 QKAAAAGIVGVQVDGMDALAVYAATREARERAVNGEGPTLIETLCFRYGPHTMAGDDPTK 283 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNK--WA 324 YRT+E NE DP+ + RK L NK W+ Sbjct: 284 YRTKEIENEW-EQKDPLVRFRK-FLENKGLWS 313 >gi|254383335|ref|ZP_04998687.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces sp. Mg1] gi|194342232|gb|EDX23198.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces sp. Mg1] Length = 382 Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 127/257 (49%), Gaps = 12/257 (4%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR+ +A L G + + +GQEA + + L E D + +YR+ +A G+D Sbjct: 69 RRYNAQATALTRQGRLAVYPS-TVGQEACEIAAALVLEEQDWLFPSYRDTLAAVARGLDP 127 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 + + L G + + ST + Q+ G+A A + R D + Sbjct: 128 VQALTLLRGDWHTGYDPREHRIAPLSTP---------LATQLPHAVGLAHAARLRGDDVV 178 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 + GDG ++G +E+ N AA+W V+++++NN +A+ +++ +A + + V + Sbjct: 179 ALAMVGDGGTSEGDFHEALNFAAVWQAPVVFLVQNNGFAISVPLAKQTAAPTLAHKAVGY 238 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEI 301 +PG VDG D+ A+ + +AV R+ GP +IE +TYR H+ +D A YR E+ Sbjct: 239 GMPGRLVDGNDVAAMHEVLSEAVQRARSGGGPTLIEAVTYRIEAHTNADDATRYRGDAEV 298 Query: 302 NEMRSNHDPIEQVRKRL 318 ++ HDP++ + + L Sbjct: 299 EAWKA-HDPVQLLEREL 314 >gi|282863270|ref|ZP_06272329.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sp. ACTE] gi|282561605|gb|EFB67148.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces sp. ACTE] Length = 386 Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 78/312 (25%), Positives = 146/312 (46%), Gaps = 12/312 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L Y ++ RR+ +A L G + + GQEA V + L E D + +YR+ Sbjct: 53 LRLYAELVRGRRYNAQATALTKQGRLAVYPS-STGQEACEVAAALVLEERDWLFPSYRDT 111 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 +A G+D + + L G + + + T + Q+ G+A Sbjct: 112 LAAVARGLDPVEALTLLRGDRHTGYDPREHRIAPLCTP---------LATQLPHAVGLAH 162 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + + D + + GDG ++G +E+ N AA+W V+++++NN +A+ +++ +A Sbjct: 163 AARLKGDDVVALAMVGDGGTSEGDFHEALNFAAVWRAPVVFLVQNNGFAISVPLAKQTAA 222 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + + + V + +PG VDG D A+ + +AVA R+ GP ++E +TYR H+ +D Sbjct: 223 PSLAHKAVGYGMPGRLVDGNDAAAMHQVLGEAVARARSGGGPTLVEAVTYRMDAHTNADD 282 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 A YR ++ R+ HDPI + + L E + + ++ + E +D Sbjct: 283 ATRYRGDSDVEAWRA-HDPILLLERELTGRGLLDEEAVGTVREAAERMAADLREQMNADP 341 Query: 352 EPDPAELYSDIL 363 DP +L+S + Sbjct: 342 PLDPMDLFSHVF 353 >gi|83638773|gb|AAI09670.1| BCKDHA protein [Bos taurus] Length = 453 Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 87/321 (27%), Positives = 144/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L Y+ M L+ E + G + F G+E VG +L + Sbjct: 101 EDPHLPQEKVLKFYKSMTLLNTMERILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDDT 159 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 160 DLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDLGKGRQMPVHYGCRERHFVTISSPLAT 219 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 220 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 279 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 280 STPTSEQYRGDGIAARGPGYGILSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 339 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R L W + K RK + Sbjct: 340 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHHLQSRGWWDDEQEKAWRKQSRKKVM 399 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P+ ++SD+ Sbjct: 400 EAFEQAERKLKPNPSLIFSDV 420 >gi|325962774|ref|YP_004240680.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component subunit alpha [Arthrobacter phenanthrenivorans Sphe3] gi|323468861|gb|ADX72546.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Arthrobacter phenanthrenivorans Sphe3] Length = 389 Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 90/322 (27%), Positives = 151/322 (46%), Gaps = 13/322 (4%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 + V + EQ S + M +IRR + +A L G + + L +GQEA VG +L Sbjct: 45 YWVRDITDEQLCSLFEDMTVIRRIDVEATALQRQGELALWPPL-LGQEAAQVGSGRALRA 103 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D + ++YRE+G GVD + I+ + +G S T N I+G Sbjct: 104 DDFVFSSYRENGVAYCRGVDLTDIVR--------VWRGNASSGWDPYTIN-MATPQIIIG 154 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 AQ TG A + +D + V FGDGA ++G V E+ AA + + V++ NN +A Sbjct: 155 AQTLHATGYAMGIQNDGADSVAVTYFGDGATSEGDVNEAMVFAASFQVPVVFFCTNNHWA 214 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + V R + + + R F IP M+VDG D+ AV A A+ R GP IE ++ Sbjct: 215 ISEPV-RLQSHIHLADRATGFGIPSMRVDGNDVLAVMAATRVALDRARRGGGPTFIEAVS 273 Query: 282 YRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YR H+ + DP YR E+ + + DPI ++ L ++G ++++ + Sbjct: 274 YRMGPHTTADDPTRYRDANELEDWAAK-DPISRIAALLERKGLLTDGLQEQVKDKADAVA 332 Query: 341 NNSVEFAQSDKEPDPAELYSDI 362 + + +P+P +++ + Sbjct: 333 REMRKGCTTMPDPEPLDVFRHV 354 >gi|182437541|ref|YP_001825260.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces griseus subsp. griseus NBRC 13350] gi|326778196|ref|ZP_08237461.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces cf. griseus XylebKG-1] gi|178466057|dbj|BAG20577.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Streptomyces griseus subsp. griseus NBRC 13350] gi|326658529|gb|EGE43375.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces cf. griseus XylebKG-1] Length = 386 Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 76/289 (26%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ + E L + ++ RR+ +A L G + + GQEA + + L E D Sbjct: 44 VADVDPELLLRLHAELVRGRRYNAQATALTKQGRLAVYPS-STGQEACEIAAALVLEERD 102 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +YR+ +A G+D + + L G + + + T + Q Sbjct: 103 WLFPSYRDTLAAVARGLDPVEALTLLRGDRHTGYDPREHRIAPLCTP---------LATQ 153 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A A + + D + + GDG ++G +E+ N AA+W V+++++NN +A+ Sbjct: 154 LPHAVGLAHAARLKGDDVVALAMVGDGGTSEGDFHEALNFAAVWKAPVVFLVQNNGFAIS 213 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 +++ +A + + + V + +PG VDG D AV + +AVA R +GP ++E +TYR Sbjct: 214 VPLAKQTAAPSLAHKAVGYGMPGRLVDGNDAAAVHQVLGEAVARARRGEGPTLVEAVTYR 273 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 H+ +D A YR E+ ++ HDP+ RLL + G L E Sbjct: 274 MEAHTNADDATRYRVDSEVEAWKA-HDPV-----RLLERELTERGLLDE 316 >gi|116202753|ref|XP_001227188.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88177779|gb|EAQ85247.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 423 Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 97/358 (27%), Positives = 162/358 (45%), Gaps = 26/358 (7%) Query: 19 PSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLML------LIRRFEEKAGQL 72 P++ RA + VD FE + + E+ + YR ML LI ++ G+L Sbjct: 10 PALPTYRAIDQNGVAVD----PNFE-PDLSDEEVVKLYRDMLTVSVMDLIMFDAQRQGRL 64 Query: 73 YGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR 132 F + G+EAV V +L + D + YRE G G + M +L Sbjct: 65 -------SFYMVSAGEEAVSVATASALEKEDVIFCQYREQGVFKQRGFTLTDFMNQLFAN 117 Query: 133 QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVC 186 KG+ +H S + + + Q+ +G A+A K +R ++ Sbjct: 118 HKDPGKGRNMPVHYGSRELNIHTISSPLATQLPQASGAAYALKIQRMQDPSIPPRVVAAY 177 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPG 246 FG+GAA++G + + NIAA + VI+V NN YA+ T + RG+ + I Sbjct: 178 FGEGAASEGDFHAALNIAATRSCPVIFVCRNNGYAISTPTLEQYRGDGIASRGLGYGIET 237 Query: 247 MQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEM 304 ++VDG D AV+ M KA G P++IE +TYR HS SD + YR + E+ + Sbjct: 238 IRVDGNDFWAVREVMKKAREIALQDGGRPVLIEAMTYRVSHHSTSDDSFAYRAKVEVEDW 297 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + +PI ++RK + E KE ++R+ + + A+ +K+P ++ D+ Sbjct: 298 KRRDNPIARLRKWMEAKGCWDEHKEKEARESIRRDVLKAFSEAEREKKPPVRTMFEDV 355 >gi|148553705|ref|YP_001261287.1| 3-methyl-2-oxobutanoate dehydrogenase [Sphingomonas wittichii RW1] gi|148498895|gb|ABQ67149.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Sphingomonas wittichii RW1] Length = 409 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 83/273 (30%), Positives = 136/273 (49%), Gaps = 5/273 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R ML R F+++ +L+ G F +G+EA+ V ++L E D YR G ++ Sbjct: 82 RAMLATRLFDDRMFRLHRQGKTS-FYMKSLGEEAIGVAQSLALGERDMSFPTYRMLGWLM 140 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 A ++ E+ KGK + + GFY G VG++ G A A+ Y Sbjct: 141 ARDYPLIHLVNEIFSNAEDPLKGKQLPILYSARDYGFYSLSGNVGSRFGHAVGWAMASAY 200 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNF 235 + D I + G+G +G +E+ A+++ VI + NNQYA+ + A A+ T F Sbjct: 201 KGDDGIAIGYIGEGTTAEGDFHEALTFASVYRAPVILCVTNNQYAISSFSGIAGAEATTF 260 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + + +++ +PG++VDG D AV A A R + G +IE+ TYR GHS S DP Sbjct: 261 AAKAIAYGLPGLRVDGNDFLAVWAATTWAAERARTNHGATLIELFTYRAAGHSTSDDPTK 320 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLH-NKWASE 326 YR +E E DP++++++ L+ +W E Sbjct: 321 YRPADEA-EHWPLGDPVDRLKQHLIAIGEWDEE 352 >gi|197121831|ref|YP_002133782.1| pyruvate dehydrogenase (acetyl-transferring) [Anaeromyxobacter sp. K] gi|196171680|gb|ACG72653.1| Pyruvate dehydrogenase (acetyl-transferring) [Anaeromyxobacter sp. K] Length = 372 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 83/325 (25%), Positives = 153/325 (47%), Gaps = 15/325 (4%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + + E+ L+ +R ++ R + + L G +G F G+EA +VG ++ D Sbjct: 30 ATLSPEEALALHRHLVRARALDARMTALQRQGRIG-FYVGAEGEEACVVGAAAAMAPQDW 88 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YREH L G+ + L G G +++G+ H + +G Q+ Sbjct: 89 LFPCYREHAAALLRGLPLDAFLCNLFGNSGDLARGRQMPCHETWRPGHYASVSAPLGTQL 148 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G A+A + + D + + FGDGA + + + A + + V+++ N +A+ T Sbjct: 149 PHAVGAAWAARLKGEDMVSLTWFGDGATSTHDFHTALGFAGVHRVPVVFLCRANGWAIST 208 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + +A +++G+++ + G +VDG D+ AV A +A A A +GP ++E +TYR Sbjct: 209 PTAMQTAAETIAQKGIAYGVHGERVDGNDLLAVHAATRRARARAAAGEGPTLLECVTYRV 268 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD----LKEIEMNVRKI 339 H+ S DP YR E+ R+ DP+E++R L + G L+E + +R Sbjct: 269 GPHTTSDDPRGYRDEAEVAPWRAR-DPLERLRVHLERTGALAPGAHAALLREADEEIRAA 327 Query: 340 INNSVEFAQSDKEPDPAE--LYSDI 362 + A+ + P PA L+ D+ Sbjct: 328 V------ARVEALPPPARESLFDDV 346 >gi|94496507|ref|ZP_01303084.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Sphingomonas sp. SKA58] gi|94424253|gb|EAT09277.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Sphingomonas sp. SKA58] Length = 429 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 80/272 (29%), Positives = 134/272 (49%), Gaps = 4/272 (1%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E L R M L R F+ + + G F G+EAV +G M+L+ D +Y Sbjct: 87 ETLLKMLRYMALTRAFDARMFRAQRQGKTS-FYMKSTGEEAVSIGAAMALSRDDMCFPSY 145 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+ G ++A +M ++ +G KG+ + + + GF+ G + Q G Sbjct: 146 RQQGILIARDWSLVDMMNQIYSNKGDRMKGRQLPIMYSAREAGFFSISGNLTTQYPQAVG 205 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 A A+ + +I G+G+ +G + + A+++ VI + NNQ+A+ + A Sbjct: 206 WAMASAAKGDTRIAATWCGEGSTAEGDFHSACTFASVYRAPVILNVVNNQWAISSFSGFA 265 Query: 230 SAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 A+ T F+ R V + I G++VDG D+ AV A A RA+ GP +IE TYR GHS Sbjct: 266 GAEATTFAARAVGYGIAGLRVDGNDVLAVYAATRWAADRARANAGPTLIEHFTYRVEGHS 325 Query: 289 MS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 S DP+ YR+ EE ++ DP+ ++++ + Sbjct: 326 TSDDPSAYRSAEESSQWPLG-DPVARLKQHCI 356 >gi|332671065|ref|YP_004454073.1| pyruvate dehydrogenase E1 component subunit alpha [Cellulomonas fimi ATCC 484] gi|332340103|gb|AEE46686.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cellulomonas fimi ATCC 484] Length = 392 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 93/329 (28%), Positives = 157/329 (47%), Gaps = 27/329 (8%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ + + L+ Y M+++RRF+ +A L G +G + L GQEA VG +L D Sbjct: 58 VADVDDDALLALYEDMVVVRRFDTEAVALQRQGQLGLWPPLN-GQEAAQVGSARALRAND 116 Query: 104 QMITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 + +YRE+G G + ++ G Q G ++M + + +VGA Sbjct: 117 FVFGSYRENGVAYCRGATPTDLVRVWRGTTQSGWDPRD---LNMATPQI-------VVGA 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q TG A + D V FGDGA +QG V+E+ AA V++ +NNQ+A+ Sbjct: 167 QALHATGYALGCRLDGVDSAVVAYFGDGATSQGDVHEAMVFAASGGAPVVFFCQNNQWAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 V + +T + R + PG++VDG D+ AV A A+ R +GP ++E +TY Sbjct: 227 SEPVDLQT-RTPIATRAAGYGFPGVRVDGNDVLAVLAVTRAALDRARRGEGPTLVEAVTY 285 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R H+ SD + E + DP+ +V +RLL + A + + R + Sbjct: 286 RMGPHTTSDDPTRYADPAVREHWTARDPVTRV-ERLLRARGALD------DEGARAVAGR 338 Query: 343 SVEFAQSDKE------PDPAE-LYSDILI 364 + FAQ+ ++ P P++ L+ +L+ Sbjct: 339 ADAFAQAMRDGCYALTPPPSDTLFDHVLV 367 >gi|90108853|pdb|2BFB|A Chain A, Reactivity Modulation Of Human Branched-Chain Alpha- Ketoacid Dehydrogenase By An Internal Molecular Switch Length = 400 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 88/321 (27%), Positives = 143/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 106 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + AYRE G ++ MA+ G + KG+ +H + F + Sbjct: 107 DLVFGAYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 167 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 227 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R S SD ++ +R+ +E+N PI ++R LL W E K R+ + Sbjct: 287 RIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 346 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 347 EAFEQAERKPKPNPNLLFSDV 367 >gi|254774501|ref|ZP_05216017.1| PdhA [Mycobacterium avium subsp. avium ATCC 25291] Length = 355 Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 86/297 (28%), Positives = 138/297 (46%), Gaps = 40/297 (13%) Query: 40 EGFEVSEFNKEQELSA------YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 +G E +EL A Y +M+L R + + L G + F C GQEA V Sbjct: 14 DGTPTPEHRYSRELPAETLSWLYEMMVLTRELDGEFVNLKRQGQLALFAS-CRGQEAAQV 72 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 G L + D + YRE G L G+ + G + +G + Sbjct: 73 GATACLRKTDWLFPQYRELGAFLVRGIPPGNV--------GAVWRGT------------W 112 Query: 154 YGGHGI-----------VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 +GG G +G Q G A A + D + + GDGA + G V+E+ N Sbjct: 113 HGGLGFTDKCCAPLSIPIGTQTLHAVGAAMAAQRLGEDSVTIAFLGDGATSVGDVHEALN 172 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 AA++ ++ ++NNQ+A+ V++ +A + + + + + +PG++VDG D+ A A Sbjct: 173 FAAVFRTPCVFFVQNNQWAISLPVAKQTAAPSLAHKAIGYGMPGIRVDGNDVLACYAVTA 232 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 +A A RA GP +IE +TYR H+ S DP YRT++E++ + DPI + R L Sbjct: 233 EAAARARAGGGPTLIEAITYRLGPHTTSDDPTRYRTQDEVDHW-AALDPIPRYRSYL 288 >gi|157881366|pdb|2BFE|A Chain A, Reactivity Modulation Of Human Branched-Chain Alpha- Ketoacid Dehydrogenase By An Internal Molecular Switch Length = 399 Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 144/321 (44%), Gaps = 3/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 106 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + A RE G ++ MA+ G + KG+ +H + F + Sbjct: 107 DLVFGAAREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 167 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 227 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R GHS SD ++ +R+ +E+N PI ++R LL W E K R+ + Sbjct: 287 RI-GHSTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 345 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 346 EAFEQAERKPKPNPNLLFSDV 366 >gi|195395472|ref|XP_002056360.1| GJ10905 [Drosophila virilis] gi|194143069|gb|EDW59472.1| GJ10905 [Drosophila virilis] Length = 437 Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 86/310 (27%), Positives = 144/310 (46%), Gaps = 4/310 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R MLL+ ++ + G + F G+EA +G +L D + YRE G + Sbjct: 96 FRDMLLLSTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAALEMRDIIYGQYREAGVL 154 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G + + + G + +GK +H S + F + Q+ G A+A K Sbjct: 155 VWRGFRIDQFIDQCYGNDDDLGRGKQMPVHYGSKELNFVTISSPLSTQIPQAVGAAYALK 214 Query: 176 YRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + ++ CVVC FG+GAA++G + +FN AA VI NN +A+ T + Sbjct: 215 RQPNNDSCVVCYFGEGAASEGDAHAAFNFAATLECPVILFCRNNGFAISTPSNEQYRGDG 274 Query: 235 FSKRG-VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + RG + + I ++VDG D+ AV M A Y PI+ E L YR HS SD + Sbjct: 275 IAGRGPMGYGIATIRVDGTDVFAVYNAMKLAREYVLRENKPIVFEALAYRVGHHSTSDDS 334 Query: 294 N-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR+ EEI + PI +++ ++H W +E E VRK + + ++ + Sbjct: 335 TAYRSAEEIEVWNTLEHPISKLKSYMVHKGWFNEQQETEFVSGVRKQVLKQIAISEKKLK 394 Query: 353 PDPAELYSDI 362 P+ E++ + Sbjct: 395 PNWREMFEGV 404 >gi|314936360|ref|ZP_07843707.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus hominis subsp. hominis C80] gi|313654979|gb|EFS18724.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus hominis subsp. hominis C80] Length = 333 Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 90/305 (29%), Positives = 139/305 (45%), Gaps = 3/305 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM ++ EGD YR+ + Sbjct: 18 YKWMDLGRKLDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYAMKEGDISSPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ M G++ I S GK H + G V Q+ G A A Sbjct: 77 TYMGISPYDTMLASFGKKDDINSGGKQMPSHFSHREKGILSQSSPVATQIPHSVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + I G+G++NQG +E N A + NL + VI NN+YA+ S A T+ Sbjct: 137 KMNQQSNIATATVGEGSSNQGDFHEGLNFAGVHNLPFVCVIINNKYAISVPDSLQYAATH 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + I G VDG D A+ M +A +G +IE +T R HS D Sbjct: 197 LSDRAIGYGIHGETVDGNDPIAMYKAMKEARERALNGEGATLIEAITTRMTPHSSDDDDT 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR++EE + +++ D + + LL E L E++ + II+ + + A++ + PD Sbjct: 257 YRSKEERDAFKTS-DCNLKFKNELLDLGIIDEDWLNELDNAHKSIIDKATKDAENAQYPD 315 Query: 355 PAELY 359 E Y Sbjct: 316 VEETY 320 >gi|255932303|ref|XP_002557708.1| Pc12g08790 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582327|emb|CAP80506.1| Pc12g08790 [Penicillium chrysogenum Wisconsin 54-1255] Length = 448 Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 97/372 (26%), Positives = 168/372 (45%), Gaps = 32/372 (8%) Query: 16 ALNPSVSAKRAATSSVDCVDIPFL-----EGFEVSE------FNKEQELSAYRLMLLIR- 63 A+N +++ A + D IP +G+++ + E+ L+ Y+ ML + Sbjct: 45 AVNSKFTSEMAFLKASDLPAIPTYRVMDSDGYQIDKTRPAPNVTNEEVLTWYKNMLSVSV 104 Query: 64 ----RFE-EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 FE ++ G+L F + G+E + VG +LT D + YRE G Sbjct: 105 MDVVMFEAQRQGRL-------SFYMVSAGEEGITVGSAAALTPDDVVFAQYREAGVFQQR 157 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR- 177 G M++L +G+ +H + + Q+ G A+A K + Sbjct: 158 GFTLKNFMSQLFANANDTGRGRNMPVHYGQNYPRTHTISSPLATQIPQAAGAAYALKLQD 217 Query: 178 -----RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 R +I FG+GAA++G + + NIAA + V+++ NN YA+ T Sbjct: 218 LQNPNRDPRIVACYFGEGAASEGDFHAALNIAATRSCPVVFICRNNGYAISTPTLEQYRG 277 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSD 291 + RGV + I ++VDG D+ AV M +A + G P++IE ++YR HS SD Sbjct: 278 DGIASRGVGYGIDTIRVDGNDVFAVNEAMKEARRLALSDGGRPVLIEAMSYRVSHHSTSD 337 Query: 292 PA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 + YR R E+ + + +PI ++RK L + SE KE +RK + A+ + Sbjct: 338 DSFAYRARVEVEDWKRRDNPIIRLRKWLENQGIWSEEQEKETRDEMRKAVLKEFGEAEQE 397 Query: 351 KEPDPAELYSDI 362 K+P + ++D+ Sbjct: 398 KKPSLRDAFTDV 409 >gi|156544881|ref|XP_001607178.1| PREDICTED: similar to GA20891-PA [Nasonia vitripennis] Length = 417 Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 91/313 (29%), Positives = 151/313 (48%), Gaps = 7/313 (2%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + AY+ ML + + + G + F G+EAV +G +L D + YRE Sbjct: 75 VKAYKTMLQLNTMDTILYESQRQGRIS-FYMTNFGEEAVQIGSAAALLADDLIYAQYREA 133 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G +L S + + G I+KG+ +H S F + Q+ G A+ Sbjct: 134 GILLWRDFRVSDFVNQCYGNVEDINKGRQMPVHYGSKALNFMTISSPLTTQLPQAAGAAY 193 Query: 173 ANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A K K CV C FG+GAA++G + + N AA + V++V NN YA+ T + Sbjct: 194 AFKLS-GKKACVACYFGEGAASEGDAHAALNFAATLSCPVVFVCRNNGYAISTPSHQQYN 252 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + +G ++ I ++VDG D+ AV A Y K P++IE +TYR HS SD Sbjct: 253 GDGIAAKGPAYGISTIRVDGNDLIAVFNATRYARDYAVEKKKPVLIEAMTYRVGHHSTSD 312 Query: 292 PAN-YRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINNSVEFAQS 349 + YR+ EIN R+N PI ++R L K W + + I+ N + +I +++ A++ Sbjct: 313 DSTAYRSNSEINS-RANASPIRRLRSYLESRKLWDQAREDEAIKANKKSVI-DAIAAAET 370 Query: 350 DKEPDPAELYSDI 362 +P ++++D+ Sbjct: 371 KLKPGWKDMFADV 383 >gi|297277135|ref|XP_001101959.2| PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial isoform 3 [Macaca mulatta] Length = 444 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 90/321 (28%), Positives = 143/321 (44%), Gaps = 3/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 93 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 151 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 152 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 211 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 212 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 271 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 272 STPTSEQYRGDGIA-RGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 330 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R LL W E K RK + Sbjct: 331 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRKKVM 390 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 391 EAFEQAERKPKPNPNLLFSDV 411 >gi|316974965|gb|EFV58430.1| 2-oxoisovalerate dehydrogenase complex, E1 component, alpha subunit [Trichinella spiralis] Length = 683 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 9/323 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + F+ + + Y+ MLL+ +E G + F G+EA +G +L D Sbjct: 340 IKAFSADLCMRMYKKMLLVHVVDEILYNAQRQGRIS-FYLTNDGEEATQIGSASALQADD 398 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YRE G +L +M + G ++KG+ +H S + + Q Sbjct: 399 LIYAQYRELGTLLWRDFPLQSLMDQCVGNADDLNKGRQMPVHYGSKELNVVTISSTLATQ 458 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G A+A K R+ + + FGDGAA++G + +FN A V++ NN YA+ Sbjct: 459 MPQAVGSAYAMKLRKKQNLVICYFGDGAASEGDCHAAFNFAGTLRCPVVFFCRNNGYAIS 518 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA---HKGPIIIEML 280 T S A RG ++ + ++VDG D+ AV A + R H P +IE + Sbjct: 519 TCSSEQYAGDGIGSRGPAYGLNTVRVDGNDVFAVHM----ATLHARQMALHCEPCLIEAI 574 Query: 281 TYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR HS SD + YR+ EI + ++ P+ ++R L ++ E + ++ R+ Sbjct: 575 TYRLGHHSTSDDSTAYRSAAEIQLWQKSNSPLARLRAYLFNSGLLDEKQEQSLQKTYRQE 634 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 + NS+ ++ +P+ L++D+ Sbjct: 635 VLNSLILSEKKPKPEIETLFTDV 657 >gi|310794805|gb|EFQ30266.1| dehydrogenase E1 component [Glomerella graminicola M1.001] Length = 431 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 94/358 (26%), Positives = 159/358 (44%), Gaps = 26/358 (7%) Query: 19 PSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFE------EKAGQL 72 P+V R VD F V + +++ + Y+ M+ I + ++ G+L Sbjct: 46 PAVPTYRVVDQDGTVVDDAF-----VPDLGEKEIVKLYKDMIFISVMDLIMFDAQRQGRL 100 Query: 73 YGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR 132 F + G+EA+ VG L D + YRE G G M +L Sbjct: 101 -------SFYMVSAGEEALSVGSASVLAPEDVIFCQYREQGVFKQRGFTTEDFMNQLFAN 153 Query: 133 QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVC 186 +G+ +H S K + + Q+ +G A+A K +R ++ Sbjct: 154 SKDPGRGRNMPVHYGSKKLNIHTISSPLATQLPQASGAAYALKIQRMQDQSIPPRVVAAY 213 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPG 246 FG+GAA++G + + NIAA + VI++ NN YA+ T + RG+ + I Sbjct: 214 FGEGAASEGDFHAALNIAATRSCPVIFICRNNGYAISTPTLDQYRGDGIASRGLGYGIDT 273 Query: 247 MQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEM 304 ++VDG DI AV+ KA + G P++IE +TYR HS SD + YR R E+ + Sbjct: 274 IRVDGNDIWAVREATKKAREMALENGGRPVLIEAMTYRVSHHSTSDDSFAYRARVEVEDW 333 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + +PI ++RK + E KE + R+ + + + A+ +K+P ++ DI Sbjct: 334 KRRDNPITRLRKYMEAKGMWDESKEKECRESTRREVLKAFKEAEMEKKPPIRAMFEDI 391 >gi|302499489|ref|XP_003011740.1| hypothetical protein ARB_01968 [Arthroderma benhamiae CBS 112371] gi|302653960|ref|XP_003018795.1| hypothetical protein TRV_07197 [Trichophyton verrucosum HKI 0517] gi|291175293|gb|EFE31100.1| hypothetical protein ARB_01968 [Arthroderma benhamiae CBS 112371] gi|291182470|gb|EFE38150.1| hypothetical protein TRV_07197 [Trichophyton verrucosum HKI 0517] Length = 394 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 27/366 (7%) Query: 13 IKMALNPSVSAKRAATSSVDCVD----IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEK 68 + A NP++ R S VD P ++ EV + K + + +M +I ++ Sbjct: 4 VTPASNPAIPTYRVMDSEGVIVDKSRGPPDVKDEEVITWYKN--MLSVSIMDMIMFEAQR 61 Query: 69 AGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAE 128 G+L F + G+E + VG +L+ D + YRE G G + M++ Sbjct: 62 QGRL-------SFYMVSAGEEGIAVGSAAALSMKDVIFCQYRETGVFQQRGFTLKQFMSQ 114 Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR-----RSDKIC 183 L + KG+ +H + + Q+ +G A+A K + ++K Sbjct: 115 LFSNRNDSGKGRNMPVHYGGKDVNTHTISSTLATQIPHASGAAYALKMKALQDPNAEKQV 174 Query: 184 VVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 V C FG+GAA++G + + NIAA + VI++ NN YA+ T + RG+ + Sbjct: 175 VACYFGEGAASEGDFHAALNIAATRSCPVIFICRNNGYAISTPTLEQYRGDGIASRGIGY 234 Query: 243 NIPGMQVDGMDIRAVK-ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREE 300 I ++VDG DI AV+ AT++ P++IE ++YR HS SD + YR R E Sbjct: 235 GIDTIRVDGNDIFAVREATLEAKKRALEGSMRPVLIEAMSYRISHHSTSDDSFAYRARVE 294 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDL-KEIEMNVRKIINNSVEFAQSDKEPDPA--E 357 + + + +PI ++RK + NK DL +E +RK + EFA +++E PA E Sbjct: 295 VEDWKRRDNPISRLRK-WMENKGIWNEDLERETREQLRKDV--LAEFAAAEREKKPALKE 351 Query: 358 LYSDIL 363 +++D+ Sbjct: 352 MFTDVF 357 >gi|256379012|ref|YP_003102672.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Actinosynnema mirum DSM 43827] gi|255923315|gb|ACU38826.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Actinosynnema mirum DSM 43827] Length = 370 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 87/332 (26%), Positives = 153/332 (46%), Gaps = 30/332 (9%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 +EG + + E L +R M++ RRF+ +A L G + + GQEA VG ++ Sbjct: 27 VEGSPLRMPDDEVLLELHRRMVVGRRFDTQATALTRQGRLAVYPS-SRGQEACQVGAVLA 85 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 + E D + YR+ ++ GV A+ + L G H+ G+ Sbjct: 86 MRERDWLFPTYRDSVALVTRGVPAAGALTLLRG-----------DWHL-----GYDPREH 129 Query: 159 IVGAQVS-LGT------GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 VG Q + L T G A A +Y+ D +V GDGA ++G +E+ N A +W V Sbjct: 130 RVGPQCTPLATNTPHAVGFAHAARYKGEDTAALVLLGDGATSEGDTHEALNFAGVWKAPV 189 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 +++++NN YA+ +S+ +A + +G+ + I + VDG D AV A + +A+A Sbjct: 190 VFLVQNNGYAISVPLSKQTAAPTLAHKGIGYGIRSVLVDGNDAAAVHAVVSEALASGE-- 247 Query: 272 KGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 P+++E LTYR H+ +D A+ YR E+ + DP++++ L Sbjct: 248 --PVLVEALTYRIEAHTNADDASRYRDSAEVAHWLAR-DPVDRLASHLASRGLLDPARRD 304 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++ + +D DPA+L+ + Sbjct: 305 SVDAEAEEFAAALRAELNADARVDPADLFRHV 336 >gi|219111269|ref|XP_002177386.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411921|gb|EEC51849.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 341 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 82/311 (26%), Positives = 145/311 (46%), Gaps = 2/311 (0%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L A+R ++ +R + G + F C G+EA+ +G +L GD ++ YRE Sbjct: 6 LRAHRQIIRLRTMDTILMNAQRQGRIS-FYMTCTGEEAIHIGAASALNIGDPILAQYREQ 64 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G I+ G + + + + KG+ +H S ++ +G Q+ G+A+ Sbjct: 65 GLIMWRGFTLDQFTDQCFSNEADMGKGRQMPIHYGSRALNYHTISSPLGTQLPQAVGVAY 124 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 K + + V FGDG A+ + + N AA+ +++ NN YA+ TSV A Sbjct: 125 RLKLNGNRNVSVALFGDGCASTPDFHSALNFAAVLKSPTLFICRNNGYAISTSVEDQYAG 184 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM-SD 291 R + + G++VDG DI AV A + +A Y P++IE +TYR HS D Sbjct: 185 DGIICRAPGYGMAGIRVDGNDIFAVHAAVREAKQYALERHAPVLIECMTYRQGHHSTSDD 244 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YR+ EE+ DP+ ++ L ++W +E KEI ++ + ++ A+ Sbjct: 245 SSRYRSSEEVEAFAEICDPLTRLENFLTQHEWLNEEKAKEIRDEEKQAVIKAMNQAERKP 304 Query: 352 EPDPAELYSDI 362 P +++D+ Sbjct: 305 RPKLDYMFTDV 315 >gi|330906798|ref|XP_003295603.1| hypothetical protein PTT_01849 [Pyrenophora teres f. teres 0-1] gi|311332983|gb|EFQ96302.1| hypothetical protein PTT_01849 [Pyrenophora teres f. teres 0-1] Length = 466 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 8/281 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + +G +L+ D + YRE G L G S M +L G+ Sbjct: 128 FYMVSAGEEGIAIGSASALSPADVIFCQYRESGVYLQRGFPLSSFMNQLFANAKDNGLGR 187 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQ 194 +H S + + + Q+ G A+A K + ++ V FG+GAA++ Sbjct: 188 NMPVHYGSKELNIHTISSTLATQIPHAAGAAYALKMQNMQNPDTEPRVAVCFFGEGAASE 247 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + I++ NN YA+ T S + RG + I ++VDG DI Sbjct: 248 GDFHAALNIAATRQVPCIFICRNNGYAISTPTSDQYRGDGIASRGAGYGIATLRVDGNDI 307 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV+ A A + G P+++EM+ YR HS SD + YR R E+ + + +P+ Sbjct: 308 FAVRRATASARALALKNGGQPVLVEMMAYRVGHHSTSDDSFAYRQRVEVEDWKRRDNPLT 367 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++RK L + E KE+ + RK + + E A+ +K+P Sbjct: 368 RLRKWLEGKQLWDEDQEKELRGSTRKEVLRAFEEAEKEKKP 408 >gi|327310923|ref|YP_004337820.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component subunit alpha [Thermoproteus uzoniensis 768-20] gi|326947402|gb|AEA12508.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Thermoproteus uzoniensis 768-20] Length = 372 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 85/298 (28%), Positives = 143/298 (47%), Gaps = 8/298 (2%) Query: 40 EGFEVSEFNKEQELS-AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 E +E+ E EL+ AYR M++ R ++ A + MG V G EA G ++ Sbjct: 33 EAYEIGYKPTEGELAKAYRWMVVGRTLDKYALMYHRMGKVRSTYGPHEGHEAADAGTALA 92 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L D + YR ++A GV I A+ + G KG+ ++ K G Sbjct: 93 LRPEDWVAPHYRNLTLVIARGVPLEVIWAKFFAKSGDPDKGRNLTIEWGGFKKWRILSIG 152 Query: 159 I-VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 +G Q G A+A +Y + D++ GDG + G + N A ++ + + I N Sbjct: 153 APIGHQYVYAAGFAYALRYMKRDEVVAAYIGDGGTSTGGFHAGLNFAGVYKVPAAFFIYN 212 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PII 276 NQYA+ V+R +A + + ++ I G+ DGMD+ AV T AV +A +G P + Sbjct: 213 NQYAISMPVARQTAVERLATKAAAYGIEGVSADGMDLLAVVKTAKWAVE--KARRGEPAL 270 Query: 277 IEMLTYRYRGHSMSDPA--NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +E + YR+ H+ +D YR ++E+ E R DP+ ++ + L+ + SE D++ I Sbjct: 271 VEYVMYRFGPHTTADDPLTRYRDQKEVEEWR-RWDPLARLERFLIRSGIYSESDVRTI 327 >gi|254823116|ref|ZP_05228117.1| PdhA [Mycobacterium intracellulare ATCC 13950] Length = 355 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 87/299 (29%), Positives = 143/299 (47%), Gaps = 19/299 (6%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y LM++ R + + L G + F C GQEA +G L + D + YRE G Sbjct: 36 YELMVITRELDAEFVNLKRQGELALFAS-CRGQEAAQIGAAACLRKTDWLFPQYRELGAF 94 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G+ G G + +G F TK +G Q G A A + Sbjct: 95 LVRGIPP--------GHVGAVWRGTWHGGLEF-TKKCCAPLSIPIGTQTLHAVGAAMAAQ 145 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 D + + GDGA + G V+E+ N AA++ +++++NNQ+A+ T V + +A + Sbjct: 146 RLGEDSVTLAFLGDGATSTGDVHEALNFAAVFTTPCVFLVQNNQWAISTPVHKQTAAPSL 205 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + + + + +PG++VDG D+ A A +A A RA GP +IE +TYR H+ S DP+ Sbjct: 206 AHKAIGYGMPGVRVDGNDVLACYAVTAEAAARARAGGGPTLIEAITYRMGPHTTSDDPSR 265 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASE-------GDLKEIEMNVRKIINNSVEF 346 YRT++E++ + DPI + R L SE G + + +R + ++ +F Sbjct: 266 YRTQDEVDHW-AALDPIARYRCYLRAQGLWSERLEERVIGRAQRMRTELRDAVVDAPDF 323 >gi|1945277|emb|CAB08111.1| branched chain alpha-keto acid dehydrogenase E1-alpha subunit [Solanum lycopersicum] Length = 456 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 80/318 (25%), Positives = 149/318 (46%), Gaps = 2/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +E ++ Y M+ ++ + + G + F G+EA+ + +L+ D + Sbjct: 108 QLGEEVAVNMYSAMVTLKTMDTYLYEAQRQGRIS-FYMTTFGEEAINIASAAALSPHDFV 166 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + YRE G +L G + + G + KG+ +H S K+ + Q+S Sbjct: 167 LPQYREAGVLLWRGFTVQECTNQCFGNKDDKGKGRQMPVHYGSNKHNVITISSPLATQIS 226 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G+A++ K ++ V G+GA ++G + N AA+ VI++ NN +A+ T Sbjct: 227 QAAGVAYSLKMDKTGACAVAYTGEGATSEGDFHAGLNFAAVLEAPVIFLCRNNGWAISTP 286 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V +G+ + I ++VDG D+ AV + A + + PI++E +TYR Sbjct: 287 VHEQFRSDGIVSKGLGYGIRSIRVDGNDVIAVYNAVRAARTMAISEERPILVEAMTYRVG 346 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HS SD + YR EI ++ PI RK + N W S+ E+ +V+ + ++ Sbjct: 347 HHSTSDDSTKYRPTNEIEYWKTARCPINLFRKHIQRNGWWSDVQESELYTHVKNQVLEAI 406 Query: 345 EFAQSDKEPDPAELYSDI 362 + A+ ++P EL+SD+ Sbjct: 407 KTAEGMEKPALTELFSDV 424 >gi|323342556|ref|ZP_08082788.1| pyruvate dehydrogenase complex E1 component alpha subunit [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463668|gb|EFY08862.1| pyruvate dehydrogenase complex E1 component alpha subunit [Erysipelothrix rhusiopathiae ATCC 19414] Length = 365 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 13/291 (4%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 E EQ + +M+ R + + L G++G GQEA + + +L EGD Sbjct: 37 PELTDEQMVEMMEVMVWGREYNNRVSILSRQGIIGNLPP-TEGQEAAQLISQYALQEGDW 95 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 ++ YR+ ++ G++ + M G G + S+ F + I+GAQ+ Sbjct: 96 LLPTYRDVPPLIRHGIETRQAMNWYNGHTDGFAYDH--SIKAFPPQV-------IIGAQI 146 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G+ K + + + + GDG +QG YE N A +++ VI++ +NN + + Sbjct: 147 IQAAGVGLGLKKNKKENVAMTYIGDGGTSQGDFYEGLNFAGVYDAPVIFIAQNNGFGISV 206 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + S++G+ I + VDGMD AV A A Y A GP+++E LT+RY Sbjct: 207 PRSFQTKSATLSQKGIGVGIAHLFVDGMDPFAVYAATKAAREYAVAGNGPVLLEFLTFRY 266 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIE 333 H++S DP YR E ++ D + ++RK L W+ E + IE Sbjct: 267 GPHTLSDDPRRYRENELVDSWLPK-DQLIRMRKFLTEKGLWSEEQEAAIIE 316 >gi|116334012|ref|YP_795539.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Lactobacillus brevis ATCC 367] gi|116099359|gb|ABJ64508.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Lactobacillus brevis ATCC 367] Length = 371 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 93/330 (28%), Positives = 157/330 (47%), Gaps = 33/330 (10%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +++++ +Q + + M+ R E+ G +G F G+EA +G + E D Sbjct: 41 LAKYSDDQLVDFMKKMVWERTLHEQTMNFSRQGRLG-FYAPTAGEEASEMGSVTAFKEQD 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKG---GSMHMFSTKNGFYGGHGIV 160 ++ AYR+ ++ G +K G KG G+ H N + I+ Sbjct: 100 YLLPAYRDLPQMIQHGTTVAK----------GFLWSKGHVEGNQH--ENPNMMFP-QIII 146 Query: 161 GAQVSLGTGIAFA-NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 GAQ G+A K D++ GDG +QG YE N + + ++ ++NN Sbjct: 147 GAQYVETAGVALGIKKNGDEDRVAFAYTGDGGTSQGDWYEGVNFTSAYQAPAVFFVQNNG 206 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+ + +A +++ V+ +P +QVDGMDI AV A + A GP++IE Sbjct: 207 WAISVPRKKQTAAETLAQKAVAMGVPSVQVDGMDIVAVHEVSKAAREFAAAGNGPVVIET 266 Query: 280 LTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMN 335 LTYRY HS + DP+ YRT+EE + + DP+ ++RK +L +K W+ + + K ++ Sbjct: 267 LTYRYGAHSSAGDDPSRYRTKEE-EKPWFDADPLVRLRK-VLTDKGVWSQDQEDKLVD-- 322 Query: 336 VRKIINNSVEFAQSDKEPD--PAELYSDIL 363 EF Q+ KE + PA+ SD L Sbjct: 323 -----GYKDEFKQAMKEAEAAPAQKVSDFL 347 >gi|85057416|ref|YP_456332.1| pyruvate dehydrogenase E1 component alpha subunit [Aster yellows witches'-broom phytoplasma AYWB] gi|84789521|gb|ABC65253.1| pyruvate dehydrogenase E1 component alpha subunit [Aster yellows witches'-broom phytoplasma AYWB] Length = 363 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 82/282 (29%), Positives = 138/282 (48%), Gaps = 12/282 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L Y+ M+L R+ + A + G +G + L GQEA VG+ +L D + YR+ Sbjct: 38 LKMYKTMVLGRQADLAALKYQRQGRMGNYL-LNSGQEASQVGVAAALEPQDWVSPYYRDA 96 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G L GV K G + G K + I+G+ V+LG G+A Sbjct: 97 GIFLYRGVSLEKFYLYWYGNEKG---------SQLDPKLRILPTNIIIGSSVNLGAGLAL 147 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+K + ++ + GDG + N AA++ + ++ I+NN Y++ ++ S Sbjct: 148 ASKMQNKKEVTIATIGDGGTAHEEFNAGLNYAAVFGVPLVVFIQNNHYSISNPRNKVSKA 207 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +++ + IPG+QVDG DI AV +A R GP +IE ++YR HS +D Sbjct: 208 KTLAQKCYACGIPGIQVDGNDILAVYVAAQEAFNEARKGNGPTLIENVSYRLEAHSTNDN 267 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 A+ YR++EE E R DPI + +K L++ + ++ +++ E Sbjct: 268 ASVYRSKEEELEWRK-KDPIVRFQKYLMNKGYLTQKQVEQFE 308 >gi|327306820|ref|XP_003238101.1| 2-oxoisovalerate dehydrogenase alpha subunit [Trichophyton rubrum CBS 118892] gi|326458357|gb|EGD83810.1| 2-oxoisovalerate dehydrogenase alpha subunit [Trichophyton rubrum CBS 118892] Length = 447 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 104/374 (27%), Positives = 176/374 (47%), Gaps = 43/374 (11%) Query: 13 IKMALNPSVSAKRAATSSVDCVD----IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEK 68 + A NP++ R S VD P ++ EV + K + + +M +I ++ Sbjct: 57 VTPASNPAIPTYRVMDSEGMIVDKSRGPPDVKDEEVITWYKN--MLSVSIMDMIMFEAQR 114 Query: 69 AGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAE 128 G+L F + G+E + VG +L+ D + YRE G G + M++ Sbjct: 115 QGRL-------SFYMVSAGEEGIAVGSAAALSMKDVIFCQYRETGVFQQRGFTLKQFMSQ 167 Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYGGHGI--------VGAQVSLGTGIAFANKYR--- 177 L + KG+ +H YGG + + Q+ +G A+A K + Sbjct: 168 LFSNRNDSGKGRNMPVH--------YGGKDVNTHTISSTLATQIPHASGAAYALKMKALQ 219 Query: 178 --RSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 ++K V C FG+GAA++G + + NIAA + VI++ NN YA+ T Sbjct: 220 DPNAEKQVVACYFGEGAASEGDFHAALNIAATRSCPVIFICRNNGYAISTPTLEQYRGDG 279 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVK-ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + RG+ + I ++VDG DI AV+ AT++ P++IE ++YR HS SD + Sbjct: 280 IASRGIGYGIDTIRVDGNDIFAVREATLEAKKRALEGSMRPVLIEAMSYRISHHSTSDDS 339 Query: 294 -NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL-KEIEMNVRKIINNSVEFAQSDK 351 YR R E+ + + +PI ++RK + NK DL +E +RK + EFA +++ Sbjct: 340 FAYRARVEVEDWKRRDNPISRLRK-WMENKGIWNEDLERETREQLRKDV--LAEFAAAER 396 Query: 352 EPDPA--ELYSDIL 363 E PA E+++D+ Sbjct: 397 EKKPALKEMFTDVF 410 >gi|205373019|ref|ZP_03225825.1| dehydrogenase E1 component, alpha subunit (lipoamide) [Bacillus coahuilensis m4-4] Length = 371 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 93/311 (29%), Positives = 144/311 (46%), Gaps = 19/311 (6%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 N EQ R M+ R ++++ L G +G F GQEA V +L + D +I Sbjct: 44 LNDEQLQELMRRMVYTRVLDQRSISLNRQGRLG-FYAPTAGQEASQVASHFALEKEDYVI 102 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ I+ G+ ++ G G +G ++ I+GAQ Sbjct: 103 PGYRDVPQIIWHGLPLAQAFLFSRGHYKGNQIPEGVNI---------LPPQIIIGAQYVQ 153 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A K R + V GDG ++QG YE N A +N I+ ++NN +A+ T Sbjct: 154 TAGVALGIKKRGKKAVAVTYTGDGGSSQGDFYEGINFAGAYNAPAIFFVQNNGFAISTPR 213 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + + +++ VS IPG+ VDGMD AV A A +GP +IE L YRY Sbjct: 214 DKQTKGATIAQKAVSAGIPGVLVDGMDPLAVYAVTADARLRAVNGEGPTLIETLCYRYGP 273 Query: 287 HSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINN 342 H+M+ DP YR+ E E DP+ + RK L K W+ E + + IE ++ I N Sbjct: 274 HTMAGDDPTRYRSSEMDTEWEKK-DPLVRFRK-FLEGKGLWSEEKETEVIE-QAKEDIKN 330 Query: 343 SVEFAQSDKEP 353 +++ ++D P Sbjct: 331 AIK--EADNTP 339 >gi|34810149|pdb|1OLU|A Chain A, Roles Of His291-Alpha And His146-Beta' In The Reductive Acylation Reaction Catalyzed By Human Branched-Chain Alpha- Ketoacid Dehydrogenase gi|49259452|pdb|1V1R|A Chain A, Crosstalk Between Cofactor Binding And The Phosphorylation Loop Conformation In The Bckd Machine Length = 400 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 88/321 (27%), Positives = 142/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 106 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 107 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 167 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 227 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R S SD ++ YR+ +E+N PI ++R LL W E K R+ + Sbjct: 287 RIGHASTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 346 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 347 EAFEQAERKPKPNPNLLFSDV 367 >gi|224066765|ref|XP_002302204.1| predicted protein [Populus trichocarpa] gi|222843930|gb|EEE81477.1| predicted protein [Populus trichocarpa] Length = 380 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 78/283 (27%), Positives = 143/283 (50%), Gaps = 1/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F G+EA+ + +L+ D ++ YRE G +L G + ++ G + KG+ Sbjct: 66 FYMTSTGEEAINIASAAALSADDIILPQYREPGILLWRGFTIEEFASQCFGNKDDCGKGR 125 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 MH S K+ F + Q+S G+A++ K + D V GDG ++G + + Sbjct: 126 QMPMHYGSKKHNFVTISSPIATQLSQAVGVAYSLKMDKKDACVVTYTGDGGTSEGDFHAA 185 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N AA+ V+++ NN +A+ T++S RG ++ I ++VDG D AV + Sbjct: 186 LNFAAVTEAPVVFICRNNGWAISTNISEQFRSDGIVVRGQAYGIRSIRVDGNDALAVYSA 245 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A + + P+++E L+YR HS SD + YR+ +EI + +P+ + RK + Sbjct: 246 IHTAREMAISEQRPVLVEALSYRVGHHSTSDDSTKYRSVDEIEYWKMVRNPVNRFRKWVE 305 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 N W SE + E+ +++K + ++ A+ ++P EL+SD+ Sbjct: 306 RNGWWSEEEESELRSSMKKQLLQVIQVAEKKEKPPLKELFSDV 348 >gi|323360062|ref|YP_004226458.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Microbacterium testaceum StLB037] gi|323276433|dbj|BAJ76578.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Microbacterium testaceum StLB037] Length = 371 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 85/276 (30%), Positives = 132/276 (47%), Gaps = 13/276 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +++ + + + +R M+L RR + + L G + + C GQEAV VG +L GD Sbjct: 40 IADLSPHELRALHRDMVLTRRLDAEGVALQRQGQLALWAP-CRGQEAVQVGTAHALAPGD 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +YREHG +L G + + +G+ S + N I+GAQ Sbjct: 99 FVFPSYREHGVLLGRGAQPADYVLAW--------RGEEHSAYDHRAINAA-PPQIIIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A + S + V +GDGA +QG V E+ A+ + V++V NNQ+A+ Sbjct: 150 SLHATGWAMGAQRDGSTDVAVAYYGDGATSQGDVNEAMVFASSFGAPVVFVCSNNQWAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V+ A+ + R F IP +++DG D A A M A+ R +GP IE +TYR Sbjct: 210 EPVT-VQAKYPIAGRAPGFGIPSLRIDGNDALACVAAMRWALDRARRGEGPSFIEAVTYR 268 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ S DP YR E+ E + DPI ++ L Sbjct: 269 MGPHTTSDDPTRYRDAAEVEEW-TQRDPIARLEAYL 303 >gi|242242786|ref|ZP_04797231.1| 3-methyl-2-oxobutanoate dehydrogenase [Staphylococcus epidermidis W23144] gi|242233922|gb|EES36234.1| 3-methyl-2-oxobutanoate dehydrogenase [Staphylococcus epidermidis W23144] gi|319400854|gb|EFV89073.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus epidermidis FRI909] Length = 332 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 88/299 (29%), Positives = 137/299 (45%), Gaps = 3/299 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM ++ +GD YR+ + Sbjct: 18 YKWMDLGRKTDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYAMQKGDISSPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ M G++ I S GK H + G V Q+ G A A Sbjct: 77 TYMGISPLDTMLSAFGKRDDINSGGKQMPSHFSHKEKGILSQSSPVATQIPHSVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K I G+G++NQG +E N AA+ L + VI NN+YA+ S A Sbjct: 137 KMDNKPNIATATVGEGSSNQGDFHEGMNFAAVHKLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + + G+QVDG D AV M +A A +GP +IE +T R HS D Sbjct: 197 LSDRALGYGMHGIQVDGNDPIAVYKAMKEARERALAGEGPTLIEAVTSRMTPHSSDDDDT 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR++EE + ++ I + + LL +E L ++E +++IN + + A++ P Sbjct: 257 YRSKEERDLLKQEDCNI-KFKTALLDQGIINENWLSQLETEHKELINEATKSAEAAPYP 314 >gi|228475951|ref|ZP_04060659.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus hominis SK119] gi|228269774|gb|EEK11254.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus hominis SK119] Length = 333 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 90/305 (29%), Positives = 139/305 (45%), Gaps = 3/305 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM ++ EGD YR+ + Sbjct: 18 YKWMDLGRKLDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYAMKEGDISSPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ M G++ I S GK H + G V Q+ G A A Sbjct: 77 TYMGISPYDTMLASFGKKEDINSGGKQMPSHFSHREKGILSQSSPVATQIPHSVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + I G+G++NQG +E N A + NL + VI NN+YA+ S A T+ Sbjct: 137 KMNQQSNIATATVGEGSSNQGDFHEGLNFAGVHNLPFVCVIINNKYAISVPDSLQYAATH 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + I G VDG D A+ M +A +G +IE +T R HS D Sbjct: 197 LSDRAIGYGIHGETVDGNDPIAMYKAMKEARERALNGEGTTLIEAITTRMTPHSSDDDDT 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR++EE + +++ D + + LL E L E++ + II+ + + A++ + PD Sbjct: 257 YRSKEERDAFKTS-DCNLKFKNELLDLGIIDEDWLNELDNAHKSIIDKATKDAENAQYPD 315 Query: 355 PAELY 359 E Y Sbjct: 316 VEETY 320 >gi|326488135|dbj|BAJ89906.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 469 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 90/369 (24%), Positives = 162/369 (43%), Gaps = 34/369 (9%) Query: 27 ATSSVDCVDIPFLEGFEVSEFN-----KEQELSAYRLM------LLIRRFEEKAGQLYGM 75 A S + CVD P + V E N + + ++ YR++ + RF+E + L + Sbjct: 70 AASGLQCVDFPGGKLSFVGEMNFLPESQTERINCYRVLDDDGGTIYNSRFQEVSKDL-AL 128 Query: 76 GMVGGFCHLCI---------------------GQEAVIVGMKMSLTEGDQMITAYREHGH 114 M L I G+EA+ + +L+ D ++ YRE G Sbjct: 129 KMYSNMVTLQIMDTIFYEAQRQGRISFYLTSNGEEAINIASAAALSAQDIVLPQYREPGV 188 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +L G + +L G + KG+ +H S + ++ + Q+ G A++ Sbjct: 189 LLWRGFTPQEFANQLFGNKLDYGKGRQMPIHYGSNRLNYFTVSSPIATQLPQAVGAAYSL 248 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + + FGDG ++G + + N AA+ +I+ NN +A+ T + Sbjct: 249 KMDKKKACAITYFGDGGTSEGDFHAALNFAAVAEAPMIFFCRNNGWAISTPTAEQFRSDG 308 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 RG ++ I +++DG D AV + + A PI+IE +TYR HS SD + Sbjct: 309 VVTRGQAYGIRSIRLDGNDTLAVYSAVHTAREMAITEGRPILIEAMTYRVGHHSTSDDST 368 Query: 295 -YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR +E+ R+ DP+ + RK + N W ++ NVR+ + +++ A+ + Sbjct: 369 KYRPADEMEHWRTARDPVSRYRKWVQGNGWWCGTQESQLRNNVRQELLQAIQVAERMPKH 428 Query: 354 DPAELYSDI 362 AEL++D+ Sbjct: 429 GLAELFTDV 437 >gi|291412159|ref|XP_002722340.1| PREDICTED: branched chain keto acid dehydrogenase E1, alpha polypeptide [Oryctolagus cuniculus] Length = 443 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 142/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 91 EDPHLPQEKVLKFYQSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALENT 149 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G KG+ +H + F + Sbjct: 150 DLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDRGKGRQMPVHYGCKERHFVTISSPLAT 209 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 210 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 269 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 270 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 329 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R LL W E K RK + Sbjct: 330 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHFLLSRGWWDEEQEKAWRKQSRKKVM 389 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P P+ L+SD+ Sbjct: 390 EAFEQAERKLKPSPSLLFSDV 410 >gi|307293289|ref|ZP_07573135.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Sphingobium chlorophenolicum L-1] gi|306881355|gb|EFN12571.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Sphingobium chlorophenolicum L-1] Length = 435 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/276 (29%), Positives = 133/276 (48%), Gaps = 4/276 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + E L R M L R F+ + + G F G+EAV +G ++L D Sbjct: 89 KLPAETLLKMLRAMALTRAFDARMFRAQRQGKTS-FYMKSAGEEAVSIGAALALASDDMC 147 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +YR+ G ++A G +M ++ +G KG+ + + + GF+ G + Q Sbjct: 148 FPSYRQQGILIARGWSIIDMMNQIYSNKGDRLKGRQLPIMYSAREAGFFSISGNLTTQYP 207 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A A+ R +I G+G+ +G + + A+++ VI + NNQ+A+ + Sbjct: 208 QAVGWAMASAARGDTRIAATWCGEGSTAEGDFHSACTFASVYRAPVIMNVVNNQWAISSF 267 Query: 226 VSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 A A+ T F+ R + + I G++VDG D AV A A RA+ GP +IE TYR Sbjct: 268 SGFAGAEATTFAARAIGYGIAGLRVDGNDALAVYAATRWAADRARANAGPTLIEHFTYRV 327 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 GHS S DP+ YR+ +E + DPI +++K + Sbjct: 328 EGHSTSDDPSAYRSADEASHWPLG-DPIARLKKHCI 362 >gi|163844682|ref|YP_001622337.1| hypothetical protein BSUIS_B0519 [Brucella suis ATCC 23445] gi|163675405|gb|ABY39515.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 410 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 153/325 (47%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 72 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 131 PTYRQAGRLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHATLVFASTYKAPVVMNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 251 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ YR + E N+ DPI +++ L+ SE K+ E V I+ ++ Sbjct: 310 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQAEAEVMDIVVSA 368 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 369 QREAEAIGTLHDGRKPSMRDMFEDV 393 >gi|41408407|ref|NP_961243.1| PdhA [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396763|gb|AAS04626.1| PdhA [Mycobacterium avium subsp. paratuberculosis K-10] Length = 363 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 88/315 (27%), Positives = 146/315 (46%), Gaps = 40/315 (12%) Query: 22 SAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSA------YRLMLLIRRFEEKAGQLYGM 75 +++ T + V + +G E +EL A Y +M+L R + + L Sbjct: 4 TSQPPMTVDLQPVQLVAADGTPTPEHRYSRELPAETLSWLYEMMVLTRELDGEFVNLKRQ 63 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 G + F C GQEA VG L + D + YRE G L G+ + G Sbjct: 64 GQLALFAS-CRGQEAAQVGATACLRKTDWLFPQYRELGAFLVRGIPPGNV--------GA 114 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGI-----------VGAQVSLGTGIAFANKYRRSDKICV 184 + +G ++GG G +G Q G A A + D + + Sbjct: 115 VWRGT------------WHGGLGFTDKCCAPLSIPIGTQSLHAVGAAMAAQRLGEDSVTI 162 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 GDGA + G V+E+ N AA++ ++ ++NNQ+A+ V++ +A + + + + + + Sbjct: 163 AFLGDGATSVGDVHEALNFAAVFRTPCVFFVQNNQWAISLPVAKQTAAPSLAHKAIGYGM 222 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINE 303 PG++VDG D+ A A +A A RA +GP +IE +TYR H+ S DP YRT++E++ Sbjct: 223 PGIRVDGNDVLACYAVTAEAAARARAGRGPTLIEAITYRLGPHTTSDDPTRYRTQDEVDH 282 Query: 304 MRSNHDPIEQVRKRL 318 + DPI + R L Sbjct: 283 W-AALDPIPRYRSYL 296 >gi|326474913|gb|EGD98922.1| 2-oxoisovalerate dehydrogenase alpha subunit [Trichophyton tonsurans CBS 112818] gi|326483815|gb|EGE07825.1| 2-oxoisovalerate dehydrogenase subunit alpha [Trichophyton equinum CBS 127.97] Length = 447 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 86/294 (29%), Positives = 145/294 (49%), Gaps = 14/294 (4%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + VG +L+ D + YRE G G + M++L + KG+ Sbjct: 120 FYMVSAGEEGIAVGSAAALSMKDVIFCQYRETGVFQQRGFTLKQFMSQLFSNRNDSGKGR 179 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR-----RSDKICVVC-FGDGAANQ 194 +H + + Q+ +G A+A K + ++K V C FG+GAA++ Sbjct: 180 NMPVHYGGKDVNTHTISSTLATQIPHASGAAYALKMKALQDPNAEKQVVACYFGEGAASE 239 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + VI++ NN YA+ T + RG+ + I ++VDG DI Sbjct: 240 GDFHAALNIAATRSCPVIFICRNNGYAISTPTLEQYRGDGIASRGIGYGIDTIRVDGNDI 299 Query: 255 RAVK-ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV+ AT++ P++IE ++YR HS SD + YR R E+ + + +PI Sbjct: 300 FAVREATLEAKKRALEGSMRPVLIEAMSYRISHHSTSDDSFAYRARVEVEDWKRRDNPIS 359 Query: 313 QVRKRLLHNKWASEGDL-KEIEMNVRKIINNSVEFAQSDKEPDPA--ELYSDIL 363 ++RK + NK DL +E +RK + EFA +++E PA E+++D+ Sbjct: 360 RLRK-WMENKGIWNEDLERETREQLRKDV--LAEFAAAEREKKPALKEMFTDVF 410 >gi|256001534|gb|ACU52091.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] Length = 184 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 105/182 (57%), Gaps = 3/182 (1%) Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 RFE + + Y G+VGGF H IGQEAV + ++YR HG L + Sbjct: 1 RFEIRGEEAYLEGLVGGFYHSYIGQEAVATAAIACTGKDHWFFSSYRCHGVALLLDIPLR 60 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 ++ AEL G++ G + G+GGSMHM + GG GIVG Q+ L G AF+ KY+ S I Sbjct: 61 QLAAELLGKETGCALGRGGSMHMCGDR--LPGGFGIVGGQIPLAAGAAFSMKYQNSSSIS 118 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK-RGVSF 242 + GDGA QG +E+ N AL +L ++ +IENN ++MGT++ RA A+ ++ + +S+ Sbjct: 119 MCFIGDGAVAQGVFHETLNFVALHSLPLMLIIENNGWSMGTALHRAIAKQPIAESQAISY 178 Query: 243 NI 244 + Sbjct: 179 GL 180 >gi|284175938|ref|ZP_06389907.1| dehydrogenase E1 component [Sulfolobus solfataricus 98/2] Length = 147 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/140 (41%), Positives = 88/140 (62%), Gaps = 1/140 (0%) Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +L + D + + +R HGH +A G+D +++AE+ G++ G+ KGKGGSMH+F G G + Sbjct: 4 TLRDDDYITSTHRGHGHCIAKGLDVKRMLAEIMGKKTGVCKGKGGSMHIFDYSKGMLGAN 63 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GIVG G A A K + D++ GDGA NQG V ES N++A+W L V++++E+ Sbjct: 64 GIVGGGAPHAVGAALAFKLKGLDRVAAAFIGDGAMNQGVVLESLNLSAIWKLPVVFIVED 123 Query: 218 NQYAMGT-SVSRASAQTNFS 236 N YAM T S++ A Q + S Sbjct: 124 NMYAMSTRSLAPAKLQPSHS 143 >gi|295399647|ref|ZP_06809628.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus thermoglucosidasius C56-YS93] gi|312111831|ref|YP_003990147.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacillus sp. Y4.1MC1] gi|294978050|gb|EFG53647.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus thermoglucosidasius C56-YS93] gi|311216932|gb|ADP75536.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacillus sp. Y4.1MC1] Length = 369 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 91/283 (32%), Positives = 135/283 (47%), Gaps = 20/283 (7%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ R ++++ L G +G F GQEA + +L + D ++ YR+ I+ Sbjct: 52 RRMVYTRVLDQRSISLNRQGRLG-FYAPTAGQEASQIASHFALEKEDFILPGYRDVPQII 110 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF--YGGHGIVGAQVSLGTGIAFAN 174 G+ + A L R G H G I+GAQ G+A Sbjct: 111 WHGLPLYQ--AFLFSR---------GHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGL 159 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K R + + GDG +QG YE N A + I+V++NN++A+ T V + + Sbjct: 160 KKRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTIAKT 219 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DP 292 +++ V+ IPG+QVDGMD AV A + A +GP +IE L +RY H+MS DP Sbjct: 220 LAQKAVAAGIPGIQVDGMDPLAVYAAVRAARERAVNGEGPTLIETLCFRYGPHTMSGDDP 279 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIE 333 YRT+E NE DP+ + RK L NK W+ E + K IE Sbjct: 280 TRYRTKELENEWEKK-DPLVRFRK-FLENKGLWSEEEENKVIE 320 >gi|226943210|ref|YP_002798283.1| TPP-dependent dehydrogenase, E1 component subunit alpha [Azotobacter vinelandii DJ] gi|226718137|gb|ACO77308.1| TPP-dependent dehydrogenase, E1 component alpha subunit, E1_dh family [Azotobacter vinelandii DJ] Length = 362 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 83/291 (28%), Positives = 138/291 (47%), Gaps = 10/291 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M+L R F++KA L G +G + +GQEA+ V + + D ++ YR+ Sbjct: 35 YRQMVLTRLFDQKAVALQRTGRIGTYAPT-LGQEAIGVAIGSLMQAEDVLVPYYRDTAVQ 93 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L GV +I+ G + G + F + Q G+A A K Sbjct: 94 LMRGVCMEEILLYWGGDERGSDFVDPRAARDFPICVP-------IATQALHACGVATAFK 146 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R ++ V GDGA ++G E+ N+A W L V++V+ +NQ+A+ Sbjct: 147 IRGEHRVAVTTCGDGATSKGDFLEALNVAGAWQLPVVFVVNDNQWAISVPRRIQCGAPTL 206 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 +++ + I G QVDG DI AV M +A+A R KGP+++E L+YR H+ +D A Sbjct: 207 AQKAIGAGIHGEQVDGNDILAVCDRMRQALARARHGKGPVLLECLSYRLGDHTTADDATR 266 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 YR EE+ + +P++++R L EG + + + + + +VE Sbjct: 267 YRCAEEVRQA-WEEEPVKRLRAFLASQGVWDEGREQALVADCQAEVQRAVE 316 >gi|283457296|ref|YP_003361869.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha [Rothia mucilaginosa DY-18] gi|283133284|dbj|BAI64049.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Rothia mucilaginosa DY-18] Length = 388 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 88/314 (28%), Positives = 146/314 (46%), Gaps = 24/314 (7%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + N + AYRLM RRF+++A L G + + GQEA +G ++ D Sbjct: 33 IEDVNADTLREAYRLMYTTRRFDDEATALQRQGQLALWV-PSRGQEAAQIGSALAYAPND 91 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI--VG 161 + +YREH LA GVD + +T +G + G H F T + VG Sbjct: 92 YIFPSYREHAVALARGVDFRDL---ITIFRGSTTHGWDMKAHNFHTYTKVLAAQTLHAVG 148 Query: 162 --------AQVSLGTGIAFANKYRRSDKI-------CVVCFGDGAANQGQVYESFNIAAL 206 A + TG + + +D V FGDG++ +G +ES AA Sbjct: 149 YAMGLNFDADIEAETGTRRTGQGQATDPAEDTQKPAVAVYFGDGSSTEGDAHESMVFAAS 208 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 +N V++ ++NN++A+ ++ S R + G++VDG D+ AV A A+ Sbjct: 209 YNAPVLFFVQNNRWAISVPFE-VQSRVPVSTRAAGYGFEGIRVDGNDVLAVLAATCYAME 267 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 RA +GP++IE TYR H+ + DP YRT ++ E DP+ ++ K L N +A Sbjct: 268 KIRAGEGPVLIEAETYRLGPHTTADDPTKYRTDADL-EGPLRRDPMLRLEKHLRDNGYAD 326 Query: 326 EGDLKEIEMNVRKI 339 + E+ + +++ Sbjct: 327 DAFFAEVAESAQQV 340 >gi|223699653|gb|ACN19731.1| hypothetical protein lmo1052 [Listeria monocytogenes] Length = 275 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 3/162 (1%) Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 I+GAQ+ G+A K R+ D + + GDG ++QG YE N A ++ I+V++NN Sbjct: 50 IIGAQIVQAAGVALGLKKRKKDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNN 109 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 ++A+ T + SA +++ V+ IPG+QVDGMD AV A A A +GP +IE Sbjct: 110 KFAISTPREKQSAAETLAQKAVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIE 169 Query: 279 MLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +TYRY H++S DP +YRT+E E DPI + R L Sbjct: 170 TMTYRYGPHTLSGDDPTHYRTKELDGEWELK-DPIVRFRTFL 210 >gi|223043306|ref|ZP_03613353.1| 2-oxoisovalerate dehydrogenase subunit alpha (branched-chain alpha-keto acid dehydrogenase e1 component alpha chain) (bckdhe1-alpha) [Staphylococcus capitis SK14] gi|222443517|gb|EEE49615.1| 2-oxoisovalerate dehydrogenase subunit alpha (branched-chain alpha-keto acid dehydrogenase e1 component alpha chain) (bckdhe1-alpha) [Staphylococcus capitis SK14] Length = 332 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 90/308 (29%), Positives = 139/308 (45%), Gaps = 3/308 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM ++ EGD YR+ + Sbjct: 18 YKWMDLGRKVDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYAMEEGDISSPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFAN 174 G+ M G++ I+ G FS K+ G V Q+ G A A Sbjct: 77 TYMGITPLDTMLSAFGKRDDINSGGKQMPSHFSHKDKGILSQSSPVATQIPHSVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K I G+G++NQG +E N A + +L + VI NN+YA+ S A Sbjct: 137 KMDNKQNIATATVGEGSSNQGDFHEGLNFAGVHDLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + + G QVDG D AV M +A +G +IE +T R HS D Sbjct: 197 LSDRALGYGMYGEQVDGNDPIAVYKAMKEARNRALNGEGATLIEAVTSRMTPHSSDDDDK 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE + ++ I + + LL N+ E L ++E +++IN + + A+ P Sbjct: 257 YRTQEERDSLKEGDCNI-KFKSFLLENEIIDEQWLSDLEQEHKELINKATKAAEEAPYPS 315 Query: 355 PAELYSDI 362 E Y+ + Sbjct: 316 IEEAYTHV 323 >gi|116493501|ref|YP_805236.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Pediococcus pentosaceus ATCC 25745] gi|116103651|gb|ABJ68794.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Pediococcus pentosaceus ATCC 25745] Length = 372 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/301 (28%), Positives = 138/301 (45%), Gaps = 18/301 (5%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + +Q + + M+ R E++ +L G +G F IG+EA + + +GD + Sbjct: 47 LSDDQLVELMKQMVFSRVLHERSTKLAKQGRLG-FYAPTIGEEASQIASNYAFEKGDWLF 105 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ ++ G K G G + F NG+ I+GAQ Sbjct: 106 PGYRDIPQLVMKGWPIYKAFLWSRGHYEG---------NEFDDVNGWMP-QIIIGAQYVE 155 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A K R+ + GDG +QG YE N A +N ++ +NN+YA+ T Sbjct: 156 AAGAALGLKMRKQPNVAYAYTGDGGTSQGDFYEGMNFAGAYNAPAVFFSQNNEYAISTPR 215 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + + + +G + +P + VDGMD A+ KA + GP+ IE +T R Sbjct: 216 KLQTKAPHLAAKGWAAGLPSLVVDGMDPIAMYLASKKARQWAVDGNGPVFIETITNRLGA 275 Query: 287 HSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HSMS DP YRT+EEI+E + +P+ + RK L + SE EIE + +++N + Sbjct: 276 HSMSGDDPLRYRTQEEIDEW-TKKEPLIRFRKYLEGLGFWSE----EIENDWTEVVNEQI 330 Query: 345 E 345 + Sbjct: 331 D 331 >gi|328791099|ref|XP_396003.3| PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial-like isoform 1 [Apis mellifera] Length = 405 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 92/284 (32%), Positives = 139/284 (48%), Gaps = 16/284 (5%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+E + +G +LT D + YRE G +L G M + G SKGK +H Sbjct: 90 GEEGIQIGSAAALTLEDIIYAQYRETGVLLWRGHSIIDFMNQCYGNHKDASKGKQMPVHY 149 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-ICVVC-FGDGAANQGQVYESFNIA 204 S K F + Q+ G A+A ++RS K C +C FG+GAA++G + +FN A Sbjct: 150 GSKKLNFVTISSPLTTQLPQAVGTAYA--FKRSQKNACTICYFGEGAASEGDAHAAFNFA 207 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 A +I++ NN YA+ T + RG ++ I ++VDG D+ A+ A Sbjct: 208 ATLECPIIFICRNNGYAISTPSQEQFKGDGIAARGPAYGISTIRVDGNDVLAMYYATKTA 267 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLH-NK 322 C + P +IE +TYR HS SD + YR+ +EI+ + PI + R L Sbjct: 268 RELCIKNGKPYLIEAMTYRIGHHSTSDDSTVYRSTDEIDHWNC-YTPILRYRNYLESIGL 326 Query: 323 WASEGDLKEIEMNVRKIINNSV--EFAQSDKEPDPA--ELYSDI 362 W E D E+N K I NS+ FA+++KE P EL++D+ Sbjct: 327 WNKEQDR---ELN--KSIKNSILLAFAEAEKELKPCWKELFTDV 365 >gi|290958957|ref|YP_003490139.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces scabiei 87.22] gi|260648483|emb|CBG71594.1| E1-alpha branched-chain alpha keto acid dehydrogenase [Streptomyces scabiei 87.22] Length = 378 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 12/257 (4%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR+ +A L G + + GQEA V + L E D + +YR+ +A G+D Sbjct: 61 RRYNTQATALTKQGRLAVYPS-STGQEACEVAAALVLEERDWLFPSYRDTLAAVARGLDP 119 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 + + L +G G H + + Q+ G+A A + + D + Sbjct: 120 VQALTLL---RGDWHTGYDPHEHRVAPLCT------PLATQLPHAVGLAHAARLKGDDVV 170 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 + GDG ++G +E+ N AA+W V+++++NN +A+ +++ +A + + + V + Sbjct: 171 ALALVGDGGTSEGDFHEALNFAAVWQAPVVFLVQNNGFAISVPLAKQTAAPSLAHKAVGY 230 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEI 301 +PG VDG D AV + +AVA+ RA GP ++E +TYR H+ +D A YR E+ Sbjct: 231 GMPGRLVDGNDAAAVHQVLAEAVAHARAGGGPTLVEAVTYRIDAHTNADDATRYRGDAEV 290 Query: 302 NEMRSNHDPIEQVRKRL 318 R+ HDP+ + L Sbjct: 291 ETWRA-HDPVALLEHEL 306 >gi|314933691|ref|ZP_07841056.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus caprae C87] gi|313653841|gb|EFS17598.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Staphylococcus caprae C87] Length = 332 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 90/308 (29%), Positives = 139/308 (45%), Gaps = 3/308 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM ++ EGD YR+ + Sbjct: 18 YKWMDLGRKVDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYAMEEGDISSPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFAN 174 G+ M G++ I+ G FS K+ G V Q+ G A A Sbjct: 77 TYMGITPLDTMLSAFGKRDDINSGGKQMPSHFSHKDKGILSQSSPVATQIPHSVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K I G+G++NQG +E N A + +L + VI NN+YA+ S A Sbjct: 137 KMDNKQNIATATVGEGSSNQGDFHEGLNFAGVHDLPFVCVIINNKYAISVPDSLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + + G QVDG D AV M +A +G +IE +T R HS D Sbjct: 197 LSDRALGYGMYGEQVDGNDPIAVYKAMKEARNRSLNGEGATLIEAVTSRMTPHSSDDDDK 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE + ++ I + + LL N+ E L ++E +++IN + + A+ P Sbjct: 257 YRTQEERDSLKEGDCNI-KFKSFLLENEIIDEQWLSDLEQEHKELINKATKAAEEAPYPS 315 Query: 355 PAELYSDI 362 E Y+ + Sbjct: 316 IEEAYTHV 323 >gi|27806229|ref|NP_776931.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial precursor [Bos taurus] gi|129030|sp|P11178|ODBA_BOVIN RecName: Full=2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial; AltName: Full=Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; Short=BCKDE1A; Short=BCKDH E1-alpha; Flags: Precursor gi|163239|gb|AAA30595.1| alpha-keto acid dehydrogenase precursor [Bos taurus] Length = 455 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/321 (26%), Positives = 144/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L Y+ M L+ + + G + F G+E VG +L + Sbjct: 103 EDPHLPQEKVLKFYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDDT 161 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 162 DLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDLGKGRQMPVHYGCRERHFVTISSPLAT 221 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 222 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 281 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 282 STPTSEQYRGDGIAARGPGYGILSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 341 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R L W + K RK + Sbjct: 342 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHHLQSRGWWDDEQEKAWRKQSRKKVM 401 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P+ ++SD+ Sbjct: 402 EAFEQAERKLKPNPSLIFSDV 422 >gi|326528343|dbj|BAJ93353.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 469 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 90/369 (24%), Positives = 162/369 (43%), Gaps = 34/369 (9%) Query: 27 ATSSVDCVDIPFLEGFEVSEFN-----KEQELSAYRLM------LLIRRFEEKAGQLYGM 75 A S + CVD P + V E N + + ++ YR++ + RF+E + L + Sbjct: 70 AASGLQCVDFPGGKLSFVGEMNFLPESQTERINCYRVLDDDGGTIYNSRFQEVSKDL-AL 128 Query: 76 GMVGGFCHLCI---------------------GQEAVIVGMKMSLTEGDQMITAYREHGH 114 M L I G+EA+ + +L+ D ++ YRE G Sbjct: 129 KMYSNMVTLQIMDTIFYEAQRQGRISFYLTSNGEEAINIASAAALSAQDIVLPQYREPGV 188 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +L G + +L G + KG+ +H S + ++ + Q+ G A++ Sbjct: 189 LLWRGFTLQEFANQLFGNKLDYGKGRQMPIHYGSNRLNYFTVSSPIATQLPQAVGAAYSL 248 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + + FGDG ++G + + N AA+ +I+ NN +A+ T + Sbjct: 249 KMDKKKACAITYFGDGGTSEGDFHAALNFAAVAEAPMIFFCRNNGWAISTPTAEQFRSDG 308 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 RG ++ I +++DG D AV + + A PI+IE +TYR HS SD + Sbjct: 309 VVTRGQAYGIRSIRLDGNDTLAVYSAVHTAREMAITEGRPILIEAMTYRVGHHSTSDDST 368 Query: 295 -YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR +E+ R+ DP+ + RK + N W ++ NVR+ + +++ A+ + Sbjct: 369 KYRPADEMEHWRTARDPVSRYRKWVQGNGWWCGTQESQLRNNVRQELLQAIQVAERMPKH 428 Query: 354 DPAELYSDI 362 AEL++D+ Sbjct: 429 GLAELFTDV 437 >gi|319761347|ref|YP_004125284.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Alicycliphilus denitrificans BC] gi|330823222|ref|YP_004386525.1| 3-methyl-2-oxobutanoate dehydrogenase [Alicycliphilus denitrificans K601] gi|317115908|gb|ADU98396.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Alicycliphilus denitrificans BC] gi|329308594|gb|AEB83009.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Alicycliphilus denitrificans K601] Length = 411 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 82/263 (31%), Positives = 129/263 (49%), Gaps = 8/263 (3%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA-CGVDASKIMAELTGRQGGISKG 139 F C+G+EA+ V M+L +GD YR+ G +LA + +++ +L Q KG Sbjct: 105 FYMQCLGEEAIAVAHSMALQDGDMCFPTYRQQGLLLARDDISMVEMICQLMSNQRDPIKG 164 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + + + GF+ G + QV G A A+ + KI GDG+ + + Sbjct: 165 RQLPVMYSYKRAGFFSISGNLATQVPQAVGWAMASAIKGDTKIASAWIGDGSTAESDFHT 224 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVK 258 + A ++ VI + NNQ+A+ T + A + T F++RGV I ++VDG D AV Sbjct: 225 ALTFAHVYRAPVIINVVNNQWAISTFQAIAGGEGTTFAQRGVGVGIASLRVDGNDFLAVY 284 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKR 317 A A R++ GP +IE TYR HS S DP+ YR ++ DPIE+++K Sbjct: 285 AASQWAAERARSNCGPTLIEWETYRAGPHSTSDDPSKYRPADDWQRFPLG-DPIERLKKH 343 Query: 318 LLH-NKWAS---EGDLKEIEMNV 336 L+ +W+ E KE+E V Sbjct: 344 LIAIGEWSEARHEAAQKELEAEV 366 >gi|296477783|gb|DAA19898.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial precursor [Bos taurus] Length = 452 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/321 (26%), Positives = 144/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L Y+ M L+ + + G + F G+E VG +L + Sbjct: 103 EDPHLPQEKVLKFYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDDT 161 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 162 DLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDLGKGRQMPVHYGCRERHFVTISSPLAT 221 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 222 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 281 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 282 STPTSEQYRGDGIAARGPGYGILSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 341 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R L W + K RK + Sbjct: 342 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHHLQSRGWWDDEQEKAWRKQSRKKVM 401 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P+ ++SD+ Sbjct: 402 EAFEQAERKLKPNPSLIFSDV 422 >gi|78065831|ref|YP_368600.1| branched-chain alpha-keto acid dehydrogenase E1 component [Burkholderia sp. 383] gi|77966576|gb|ABB07956.1| branched-chain alpha-keto acid dehydrogenase E1 component [Burkholderia sp. 383] Length = 410 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 149/330 (45%), Gaps = 10/330 (3%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G + + + ++ R ML R F+ + + F L +G+EA+ M+L Sbjct: 66 GPWAPDLDDARLIAGLRAMLKTRIFDARMMIAQRQKKIS-FYMLSLGEEAIGTAHAMALR 124 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 +GD YR+ ++A V +++ +L +G KG+ + + GF+ G + Sbjct: 125 DGDMCFPTYRQQSILIARDVSLERMICQLMSNEGDPLKGRQLPVMYSDREAGFFSISGNL 184 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q G A A+ + KI GDGA + + + A ++ V+ + NNQ+ Sbjct: 185 ATQFIQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAPVVLNVVNNQW 244 Query: 221 AMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 A+ T + A + T F+ RGV I ++VDG D A+ A A R + GP +IE Sbjct: 245 AISTFQAIAGGEGTTFAGRGVGCGIASLRVDGNDFLAIYAASSWAAERARRNLGPTLIEW 304 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL-HNKW---ASEGDLKEIEM 334 +TYR HS S DP YR ++ + DPIE+ ++ L+ W A E E+E Sbjct: 305 VTYRAGAHSTSDDPTKYRPSDDWSHFPLG-DPIERFKRHLIVKGIWSDGAHEALTAELEA 363 Query: 335 NVRKIINNSVEFAQ--SDKEPDPAELYSDI 362 V + ++ D+ P PA ++ D+ Sbjct: 364 EVIAAQKEAEKYGTLADDRIPSPASMFDDV 393 >gi|258645172|ref|NP_001158255.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial isoform 2 precursor [Homo sapiens] gi|62089242|dbj|BAD93065.1| branched chain keto acid dehydrogenase E1, alpha polypeptide variant [Homo sapiens] Length = 444 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 143/321 (44%), Gaps = 3/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 93 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 151 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 152 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 211 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 212 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 271 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 272 STPTSEQYRGDGIA-RGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 330 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R LL W E K R+ + Sbjct: 331 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 390 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 391 EAFEQAERKPKPNPNLLFSDV 411 >gi|112962123|gb|ABI28741.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962127|gb|ABI28744.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962131|gb|ABI28747.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962135|gb|ABI28750.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962139|gb|ABI28753.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962143|gb|ABI28756.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962147|gb|ABI28759.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962151|gb|ABI28762.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962155|gb|ABI28765.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962159|gb|ABI28768.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962163|gb|ABI28771.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962167|gb|ABI28774.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962171|gb|ABI28777.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962175|gb|ABI28780.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962179|gb|ABI28783.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962183|gb|ABI28786.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962187|gb|ABI28789.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962191|gb|ABI28792.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962195|gb|ABI28795.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962199|gb|ABI28798.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962203|gb|ABI28801.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962207|gb|ABI28804.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962211|gb|ABI28807.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962215|gb|ABI28810.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962219|gb|ABI28813.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962223|gb|ABI28816.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962227|gb|ABI28819.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962231|gb|ABI28822.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962235|gb|ABI28825.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962239|gb|ABI28828.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962243|gb|ABI28831.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962247|gb|ABI28834.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962251|gb|ABI28837.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962255|gb|ABI28840.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962259|gb|ABI28843.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962263|gb|ABI28846.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962267|gb|ABI28849.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962271|gb|ABI28852.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962275|gb|ABI28855.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962279|gb|ABI28858.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962283|gb|ABI28861.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962287|gb|ABI28864.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962291|gb|ABI28867.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962295|gb|ABI28870.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962299|gb|ABI28873.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962303|gb|ABI28876.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962307|gb|ABI28879.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962311|gb|ABI28882.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962315|gb|ABI28885.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962319|gb|ABI28888.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962323|gb|ABI28891.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962327|gb|ABI28894.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962331|gb|ABI28897.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962335|gb|ABI28900.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962339|gb|ABI28903.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962343|gb|ABI28906.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962347|gb|ABI28909.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962351|gb|ABI28912.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962355|gb|ABI28915.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962359|gb|ABI28918.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962363|gb|ABI28921.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962367|gb|ABI28924.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112962371|gb|ABI28927.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] Length = 270 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 3/162 (1%) Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 I+GAQ+ G+A K R+ D + + GDG ++QG YE N A ++ I+V++NN Sbjct: 45 IIGAQIVQAAGVALGLKKRKKDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNN 104 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 ++A+ T + SA +++ V+ IPG+QVDGMD AV A A A +GP +IE Sbjct: 105 KFAISTPREKQSAAETLAQKAVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIE 164 Query: 279 MLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +TYRY H++S DP YRT+E E DPI + R L Sbjct: 165 TMTYRYGPHTLSGDDPTRYRTKELDGEWELK-DPIVRFRTFL 205 >gi|124021816|ref|YP_001016123.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, subunit alpha [Prochlorococcus marinus str. MIT 9303] gi|123962102|gb|ABM76858.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Prochlorococcus marinus str. MIT 9303] Length = 280 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 110/206 (53%), Gaps = 3/206 (1%) Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQE + +K + D+ +++R H LA D ++AEL G G +G GG Sbjct: 22 HLSIGQEYWLPLVKKFFQKTDRCFSSHRSHSMYLALACDPESLIAELHGSAFGSLQGLGG 81 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMH+ +G IVG+ ++LG G A + K+ ++D + + FGDGA +G +E N Sbjct: 82 SMHLKELDSGLEASIPIVGSSIALGVGSALSAKHSKNDVLTISYFGDGACEEGIFHECLN 141 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD-IRAVKATM 261 +AAL+ L ++++ ENN Y+ T S + ++ +S + +++ D +++TM Sbjct: 142 LAALYKLPILFICENNSYSCNTHYSNRQTANDMTRFPLSHGMTNFKINNFDPYLFIESTM 201 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGH 287 +K + R P+ +E+ +YR H Sbjct: 202 EKCFSLAR--DRPVFLEISSYRLYEH 225 >gi|294011285|ref|YP_003544745.1| 2-oxoisovalerate dehydrogenase alpha subunit [Sphingobium japonicum UT26S] gi|292674615|dbj|BAI96133.1| 2-oxoisovalerate dehydrogenase alpha subunit [Sphingobium japonicum UT26S] Length = 431 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 84/277 (30%), Positives = 134/277 (48%), Gaps = 6/277 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + E L R M L R F+ + + G F G+EAV +G +L D Sbjct: 85 KLPPEMLLKMLRNMALTRAFDARMFRAQRQGKTS-FYMKSTGEEAVSIGAAAALASDDMC 143 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQV 164 +YR+ G ++A G +M ++ +G KG+ + M+S ++ GF+ G + Q Sbjct: 144 FPSYRQQGILIARGWPIVDMMNQIYSNKGDRLKGRQLPI-MYSARDAGFFSISGNLTTQY 202 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G A A+ R +I G+G+ +G + + A+++ VI + NNQ+A+ + Sbjct: 203 PQAVGWAMASAARGDTRIAATWCGEGSTAEGDFHSACTFASVYRAPVIMNVVNNQWAISS 262 Query: 225 SVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 A A+ T F+ R + + I G++VDG D AV A A RA+ GP +IE TYR Sbjct: 263 FSGFAGAEATTFAARAIGYGIAGLRVDGNDALAVYAATRWAADRARANAGPTLIEHFTYR 322 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 GHS S DP YR+ +E + DPI ++RK + Sbjct: 323 VEGHSTSDDPGAYRSADEASHWPLG-DPIARLRKHCI 358 >gi|26553960|ref|NP_757894.1| pyruvate dehydrogenase E1 component subunit alpha [Mycoplasma penetrans HF-2] gi|26453968|dbj|BAC44298.1| pyruvate dehydrogenase E1 component subunit alpha [Mycoplasma penetrans HF-2] Length = 359 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 13/282 (4%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G+ + N+E E AY M+L RR +EK + G + F +G+EA+ V +S+ Sbjct: 26 GYRIPLSNEEIE-KAYYTMVLTRRMDEKMIKWQRQGKMLTFPP-NMGEEALQVATSISMD 83 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 + D A+R L GV KIM G + G + + F + + Sbjct: 84 KQDWFAPAFRSAAVFLHSGVPMWKIMLVWKGNEAG---------NAMPEELNFLPFNIPI 134 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 G Q S GI A Y+ + GDG +G+ YE+ N A++ N I+ + NNQ+ Sbjct: 135 GTQYSHAAGIGIALNYQNKPNVAYTVIGDGGTAEGEFYEALNFASVRNAQTIFTVNNNQW 194 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ T S+ + Q + + + ++ + ++VDG + A + A AY +K PI++E + Sbjct: 195 AISTPTSKETGQMDIASKAIAAGLDFIKVDGNCLFASVDAIRAARAYVLENKKPILVEFV 254 Query: 281 TYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHN 321 TYR H+ SD P YR+ EE + DPI ++ + + N Sbjct: 255 TYRKGPHTTSDNPRIYRS-EEYECEQEKKDPILRLERWMAQN 295 >gi|148557918|ref|YP_001257490.1| 2-oxoisovalerate dehydrogenase E1 component subunit alpha [Brucella ovis ATCC 25840] gi|148369203|gb|ABQ62075.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella ovis ATCC 25840] Length = 466 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 153/325 (47%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 128 LTDEELKDGLRHMMMLRTYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 186 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 187 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 246 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 247 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 306 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 307 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 365 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ YR + E N+ DPI +++ L+ SE K+ E V I+ ++ Sbjct: 366 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQAEAEVMDIVVSA 424 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 425 QREAEAIGTLHDGRKPSMRDMFEDV 449 >gi|112960411|gb|ABI27745.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960415|gb|ABI27748.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960419|gb|ABI27751.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960423|gb|ABI27754.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960427|gb|ABI27757.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960431|gb|ABI27760.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960435|gb|ABI27763.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960439|gb|ABI27766.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960443|gb|ABI27769.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960447|gb|ABI27772.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960451|gb|ABI27775.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960455|gb|ABI27778.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960459|gb|ABI27781.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960463|gb|ABI27784.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960467|gb|ABI27787.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960471|gb|ABI27790.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960475|gb|ABI27793.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960479|gb|ABI27796.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960483|gb|ABI27799.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960487|gb|ABI27802.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960491|gb|ABI27805.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960495|gb|ABI27808.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960499|gb|ABI27811.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960503|gb|ABI27814.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960507|gb|ABI27817.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960511|gb|ABI27820.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960515|gb|ABI27823.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960519|gb|ABI27826.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960523|gb|ABI27829.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960527|gb|ABI27832.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960531|gb|ABI27835.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] Length = 243 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 3/162 (1%) Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 I+GAQ+ G+A K R+ D + + GDG ++QG YE N A ++ I+V++NN Sbjct: 18 IIGAQIVQAAGVALGLKKRKKDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNN 77 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 ++A+ T + SA +++ V+ IPG+QVDGMD AV A A A +GP +IE Sbjct: 78 KFAISTPREKQSAAETLAQKAVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIE 137 Query: 279 MLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +TYRY H++S DP YRT+E E DPI + R L Sbjct: 138 TMTYRYGPHTLSGDDPTRYRTKELDGEWELK-DPIVRFRTFL 178 >gi|223699489|gb|ACN19608.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699493|gb|ACN19611.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699497|gb|ACN19614.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699501|gb|ACN19617.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699505|gb|ACN19620.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699509|gb|ACN19623.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699513|gb|ACN19626.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699517|gb|ACN19629.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699521|gb|ACN19632.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699525|gb|ACN19635.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699529|gb|ACN19638.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699533|gb|ACN19641.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699537|gb|ACN19644.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699541|gb|ACN19647.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699545|gb|ACN19650.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699549|gb|ACN19653.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699553|gb|ACN19656.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699557|gb|ACN19659.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699561|gb|ACN19662.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699565|gb|ACN19665.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699569|gb|ACN19668.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699573|gb|ACN19671.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699577|gb|ACN19674.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699581|gb|ACN19677.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699585|gb|ACN19680.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699589|gb|ACN19683.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699593|gb|ACN19686.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699597|gb|ACN19689.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699601|gb|ACN19692.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699605|gb|ACN19695.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699609|gb|ACN19698.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699613|gb|ACN19701.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699617|gb|ACN19704.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699621|gb|ACN19707.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699625|gb|ACN19710.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699629|gb|ACN19713.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699633|gb|ACN19716.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699637|gb|ACN19719.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699641|gb|ACN19722.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699645|gb|ACN19725.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699649|gb|ACN19728.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699657|gb|ACN19734.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699661|gb|ACN19737.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699665|gb|ACN19740.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699669|gb|ACN19743.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699673|gb|ACN19746.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699677|gb|ACN19749.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699681|gb|ACN19752.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699685|gb|ACN19755.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699689|gb|ACN19758.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699693|gb|ACN19761.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699697|gb|ACN19764.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699701|gb|ACN19767.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699705|gb|ACN19770.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699709|gb|ACN19773.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699713|gb|ACN19776.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699717|gb|ACN19779.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699721|gb|ACN19782.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699725|gb|ACN19785.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699729|gb|ACN19788.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699733|gb|ACN19791.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699737|gb|ACN19794.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699741|gb|ACN19797.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699745|gb|ACN19800.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699749|gb|ACN19803.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699753|gb|ACN19806.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699757|gb|ACN19809.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699761|gb|ACN19812.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699765|gb|ACN19815.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699769|gb|ACN19818.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699773|gb|ACN19821.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699777|gb|ACN19824.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699781|gb|ACN19827.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699785|gb|ACN19830.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699789|gb|ACN19833.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699793|gb|ACN19836.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699797|gb|ACN19839.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699801|gb|ACN19842.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699805|gb|ACN19845.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699809|gb|ACN19848.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699813|gb|ACN19851.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699817|gb|ACN19854.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699821|gb|ACN19857.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699825|gb|ACN19860.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699829|gb|ACN19863.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699833|gb|ACN19866.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699837|gb|ACN19869.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699841|gb|ACN19872.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699845|gb|ACN19875.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699849|gb|ACN19878.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699853|gb|ACN19881.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699857|gb|ACN19884.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699861|gb|ACN19887.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699865|gb|ACN19890.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699869|gb|ACN19893.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699873|gb|ACN19896.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699877|gb|ACN19899.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699881|gb|ACN19902.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699885|gb|ACN19905.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699889|gb|ACN19908.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699893|gb|ACN19911.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699897|gb|ACN19914.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699901|gb|ACN19917.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699905|gb|ACN19920.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699909|gb|ACN19923.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699913|gb|ACN19926.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699917|gb|ACN19929.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699921|gb|ACN19932.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699925|gb|ACN19935.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699929|gb|ACN19938.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699933|gb|ACN19941.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699937|gb|ACN19944.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699941|gb|ACN19947.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699945|gb|ACN19950.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699949|gb|ACN19953.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699953|gb|ACN19956.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699957|gb|ACN19959.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699961|gb|ACN19962.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699965|gb|ACN19965.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699969|gb|ACN19968.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699973|gb|ACN19971.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699977|gb|ACN19974.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699981|gb|ACN19977.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699985|gb|ACN19980.1| hypothetical protein lmo1052 [Listeria monocytogenes] gi|223699989|gb|ACN19983.1| hypothetical protein lmo1052 [Listeria monocytogenes] Length = 275 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 3/162 (1%) Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 I+GAQ+ G+A K R+ D + + GDG ++QG YE N A ++ I+V++NN Sbjct: 50 IIGAQIVQAAGVALGLKKRKKDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNN 109 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 ++A+ T + SA +++ V+ IPG+QVDGMD AV A A A +GP +IE Sbjct: 110 KFAISTPREKQSAAETLAQKAVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIE 169 Query: 279 MLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +TYRY H++S DP YRT+E E DPI + R L Sbjct: 170 TMTYRYGPHTLSGDDPTRYRTKELDGEWELK-DPIVRFRTFL 210 >gi|39943658|ref|XP_361366.1| hypothetical protein MGG_03840 [Magnaporthe oryzae 70-15] gi|145014529|gb|EDJ99097.1| hypothetical protein MGG_03840 [Magnaporthe oryzae 70-15] Length = 463 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/290 (28%), Positives = 139/290 (47%), Gaps = 8/290 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+EAV VG +L D + YRE G G+ M +L + +G+ Sbjct: 134 FYMVSAGEEAVCVGSASALEMRDVIFCQYREQGVYRHRGMTFRDFMNQLFANKYDPGQGR 193 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQ 194 +H S + + + Q+ +G A+A K +R +++ VV FG+GAA++ Sbjct: 194 NMPVHYGSKELNMHTISSPLATQIPQASGAAYAMKMQRIANPDAPERVAVVYFGEGAASE 253 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA VI++ NN Y++ T + RGV + I ++VDG DI Sbjct: 254 GDFHAALNIAATRACPVIFICRNNGYSISTPSLEQYKGDGIASRGVGYGIDTVRVDGNDI 313 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV+ KA + G P+++E LTYR HS SD + YR R E+ + + +PI Sbjct: 314 WAVRKATKKARELALENGGKPVLLECLTYRVGHHSTSDDSFAYRARVEVEDWKRRDNPIS 373 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++RK + + K + +RK I + A+ +K+P ++ D+ Sbjct: 374 RLRKWMESKDMWDDDKEKVMRDRLRKEILKAFSEAEKEKKPPIRAMFEDV 423 >gi|297249657|ref|ZP_06933358.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella abortus bv. 5 str. B3196] gi|297173526|gb|EFH32890.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella abortus bv. 5 str. B3196] Length = 444 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 153/325 (47%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 106 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 164 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 165 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 224 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 225 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 284 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 285 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 343 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ YR + E N+ DPI +++ L+ SE K+ E V I+ ++ Sbjct: 344 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQAEAEVMDIVVSA 402 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 403 QREAEAIGTLHDGRKPSMRDMFEDV 427 >gi|326410682|gb|ADZ67746.1| 2-oxoisovalerate dehydrogenase subunit alpha [Brucella melitensis M28] gi|326553974|gb|ADZ88613.1| 2-oxoisovalerate dehydrogenase subunit alpha [Brucella melitensis M5-90] Length = 450 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 153/325 (47%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 112 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 170 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 171 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 230 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 231 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 290 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 291 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 349 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ YR + E N+ DPI +++ L+ SE K+ E V I+ ++ Sbjct: 350 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQAEAEVMDIVVSA 408 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 409 QREAEAIGKLHDGRKPSMRDMFEDV 433 >gi|259046579|ref|ZP_05736980.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Granulicatella adiacens ATCC 49175] gi|259036744|gb|EEW37999.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Granulicatella adiacens ATCC 49175] Length = 368 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 84/297 (28%), Positives = 138/297 (46%), Gaps = 15/297 (5%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R E++ L G +G F GQEA + ++ + D ++ YR+ ++ Sbjct: 53 MVWSRILHERSTALNRQGRLG-FYAPTAGQEASQLASIKAIEKEDVLLPGYRDVPQLVKH 111 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ S+ G G +M+ I+GAQ G+A + R Sbjct: 112 GLPLSQAFLWSRGHVAG---------NMYPESLKALPPQIIIGAQYVQAAGVALGLQKRG 162 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + V GDG ++QG YE N A + I+ I+NN +A+ T +A +++ Sbjct: 163 KKNVAVTYTGDGGSSQGDFYEGINYAGAYKSPAIFFIQNNGWAISTPRELQTAAPTLAQK 222 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ IPG+QVDGMD AV A KA Y A GP++IE + +RY H++S DP Y+ Sbjct: 223 AVAAGIPGIQVDGMDPLAVYAVTKKAREYAVAGNGPVLIETICFRYGPHTLSGDDPTRYQ 282 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 E I + + DP+ + R L SE E+ ++ I +++ ++DK+P Sbjct: 283 P-EGIQDEWAKKDPLIRFRNYLTAKGLWSEEKENEVIEATKEEIKEAIK--EADKQP 336 >gi|112960407|gb|ABI27742.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] Length = 242 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 3/162 (1%) Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 I+GAQ+ G+A K R+ D + + GDG ++QG YE N A ++ I+V++NN Sbjct: 17 IIGAQIVQAAGVALGLKKRKKDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNN 76 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 ++A+ T + SA +++ V+ IPG+QVDGMD AV A A A +GP +IE Sbjct: 77 KFAISTPREKQSAAETLAQKAVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIE 136 Query: 279 MLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +TYRY H++S DP YRT+E E DPI + R L Sbjct: 137 TMTYRYGPHTLSGDDPTRYRTKELDGEWELK-DPIVRFRTFL 177 >gi|112960599|gb|ABI27886.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] Length = 238 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 3/162 (1%) Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 I+GAQ+ G+A K R+ D + + GDG ++QG YE N A ++ I+V++NN Sbjct: 13 IIGAQIVQAAGVALGLKKRKKDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNN 72 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 ++A+ T + SA +++ V+ IPG+QVDGMD AV A A A +GP +IE Sbjct: 73 KFAISTPREKQSAAETLAQKAVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIE 132 Query: 279 MLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +TYRY H++S DP YRT+E E DPI + R L Sbjct: 133 TMTYRYGPHTLSGDDPTRYRTKELDGEWELK-DPIVRFRTFL 173 >gi|112960563|gb|ABI27859.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] Length = 238 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 3/162 (1%) Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 I+GAQ+ G+A K R+ D + + GDG ++QG YE N A ++ I+V++NN Sbjct: 13 IIGAQIVQAAGVALGLKKRKKDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNN 72 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 ++A+ T + SA +++ V+ IPG+QVDGMD AV A A A +GP +IE Sbjct: 73 KFAISTPREKQSAAETLAQKAVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIE 132 Query: 279 MLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +TYRY H++S DP YRT+E E DPI + R L Sbjct: 133 TMTYRYGPHTLSGDDPTRYRTKELDGEWELK-DPIVRFRTFL 173 >gi|254702903|ref|ZP_05164731.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella suis bv. 3 str. 686] gi|261753509|ref|ZP_05997218.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella suis bv. 3 str. 686] gi|261743262|gb|EEY31188.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella suis bv. 3 str. 686] Length = 410 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 153/325 (47%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 72 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 131 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 AVGWAMASAINHDTKIAAAWIGDGSTAESDFHATLVFASTYKAPVVMNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 251 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ YR + E N+ DPI +++ L+ SE K+ E V I+ ++ Sbjct: 310 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQAEAEVMDIVVSA 368 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 369 QREAEAIGTLHDGRKPSMRDMFEDV 393 >gi|112960535|gb|ABI27838.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960539|gb|ABI27841.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960543|gb|ABI27844.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960547|gb|ABI27847.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960551|gb|ABI27850.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960555|gb|ABI27853.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960559|gb|ABI27856.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960567|gb|ABI27862.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960571|gb|ABI27865.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960575|gb|ABI27868.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960579|gb|ABI27871.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960583|gb|ABI27874.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960587|gb|ABI27877.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960591|gb|ABI27880.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960595|gb|ABI27883.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960603|gb|ABI27889.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960607|gb|ABI27892.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960611|gb|ABI27895.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960615|gb|ABI27898.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960619|gb|ABI27901.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960623|gb|ABI27904.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960627|gb|ABI27907.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960635|gb|ABI27913.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960639|gb|ABI27916.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960643|gb|ABI27919.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960647|gb|ABI27922.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] gi|112960651|gb|ABI27925.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] Length = 239 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 3/162 (1%) Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 I+GAQ+ G+A K R+ D + + GDG ++QG YE N A ++ I+V++NN Sbjct: 14 IIGAQIVQAAGVALGLKKRKKDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNN 73 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 ++A+ T + SA +++ V+ IPG+QVDGMD AV A A A +GP +IE Sbjct: 74 KFAISTPREKQSAAETLAQKAVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIE 133 Query: 279 MLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +TYRY H++S DP YRT+E E DPI + R L Sbjct: 134 TMTYRYGPHTLSGDDPTRYRTKELDGEWELK-DPIVRFRTFL 174 >gi|112960631|gb|ABI27910.1| pyruvate dehydrogenase complex E1 component alpha subunit [Listeria monocytogenes] Length = 237 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 3/162 (1%) Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 I+GAQ+ G+A K R+ D + + GDG ++QG YE N A ++ I+V++NN Sbjct: 12 IIGAQIVQAAGVALGLKKRKKDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNN 71 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 ++A+ T + SA +++ V+ IPG+QVDGMD AV A A A +GP +IE Sbjct: 72 KFAISTPREKQSAAETLAQKAVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIE 131 Query: 279 MLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +TYRY H++S DP YRT+E E DPI + R L Sbjct: 132 TMTYRYGPHTLSGDDPTRYRTKELDGEWELK-DPIVRFRTFL 172 >gi|170783367|ref|YP_001711701.1| pyruvate dehydrogenase E1 component subunit alpha [Clavibacter michiganensis subsp. sepedonicus] gi|169157937|emb|CAQ03147.1| pyruvate dehydrogenase E1 component, alpha subunit [Clavibacter michiganensis subsp. sepedonicus] Length = 370 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 105/354 (29%), Positives = 157/354 (44%), Gaps = 45/354 (12%) Query: 3 VAKQDVTVGDIKMA--LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLML 60 + + DVTV + A L PS SA+ FL FE +++ R M Sbjct: 1 MPESDVTVQLLTPAGELAPSDSAEE------------FLPYFE--RLTEDEHSGFLRDMR 46 Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 L R F+ +A L G +G + GQEA VG + D + AYREHG L GV Sbjct: 47 LTRAFDLEATNLQRQGHLGLWAP-STGQEAAQVGSGRATRPQDHVFPAYREHGVALIRGV 105 Query: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY---- 176 D I+ + G G + H+++ ++G+Q TG A + Sbjct: 106 DPVDIVRLMRGVTHGGWDPAVANFHLYTL---------VIGSQALHATGYAMGVAFDGDV 156 Query: 177 ----RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 D + +GDGA +QG V E+F AA + ++ ++NN +A+ VS S + Sbjct: 157 GTGDPDRDTAVIAYYGDGATSQGDVSEAFVFAASFQTPQVFFLQNNHWAISVPVSTQS-R 215 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-D 291 T R F +P QVDG D+ A A K + R GP IE LTYR H+ S D Sbjct: 216 TPLYLRSRGFGVPSTQVDGNDVFASYAVTAKHLDDARNGGGPSFIEALTYRVGAHTSSDD 275 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG-------DLKEIEMNVRK 338 P YRT +E+ + DPI ++ + L N+ A + + K++ +VR+ Sbjct: 276 PTKYRTDDELQGWVAK-DPIARL-EAYLRNQGAPQSLFDGIDEEAKDLAADVRR 327 >gi|315055917|ref|XP_003177333.1| 2-oxoisovalerate dehydrogenase subunit alpha [Arthroderma gypseum CBS 118893] gi|311339179|gb|EFQ98381.1| 2-oxoisovalerate dehydrogenase subunit alpha [Arthroderma gypseum CBS 118893] Length = 447 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 105/371 (28%), Positives = 177/371 (47%), Gaps = 37/371 (9%) Query: 13 IKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIR-----RFE- 66 + A NP++ R S VD + + E+ ++ Y+ ML + FE Sbjct: 57 VTPASNPAIPTYRVMDSEGVIVD----KSRGPPDVKDEEVITWYKNMLSVSIMDMIMFEA 112 Query: 67 EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIM 126 ++ G+L F + G+E + VG +L+ D + YRE G G + M Sbjct: 113 QRQGRL-------SFYMVSAGEEGIAVGSAAALSMKDVIFCQYRETGVFQQRGFTLKQFM 165 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR-----RSDK 181 ++L + KG+ +H + + Q+ +G A+A K + ++K Sbjct: 166 SQLFSNRNDSGKGRNMPVHYGGKDVNTHTISSTLATQIPHASGAAYALKMKALQDPNAEK 225 Query: 182 ICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 V C FG+GAA++G + + NIAA + VI++ NN YA+ T + RG+ Sbjct: 226 QVVACYFGEGAASEGDFHAALNIAATRSCPVIFICRNNGYAISTPTLEQYRGDGIASRGI 285 Query: 241 SFNIPGMQVDGMDIRAVK-ATMDKAVAYCRAHKG---PIIIEMLTYRYRGHSMSDPA-NY 295 + I ++VDG DI AV+ T++ A RA +G PI+IE ++YR HS SD + Y Sbjct: 286 GYGIDTIRVDGNDIFAVREVTLE---ARRRALEGSMRPILIEAMSYRISHHSTSDDSFAY 342 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL-KEIEMNVRKIINNSVEFAQSDKEPD 354 R R E+ + + +PI ++RK + NK DL +E +RK + EFA +++E Sbjct: 343 RARVEVEDWKRRDNPISRLRK-WMENKGIWNEDLERETREQLRKDV--LAEFASAEREKK 399 Query: 355 PA--ELYSDIL 363 PA E+++D+ Sbjct: 400 PALKEMFTDVF 410 >gi|257076290|ref|ZP_05570651.1| pyruvate dehydrogenase E1 component alpha subunit [Ferroplasma acidarmanus fer1] Length = 344 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 93/334 (27%), Positives = 159/334 (47%), Gaps = 20/334 (5%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E ++ +KE L+AY+ +++ R F++K G + + L +G EA+ +GM M++ + Sbjct: 3 EETDISKEGLLAAYKNIVMERLFDKKMLNASRQGFLPFYIPL-MGHEAIHIGMGMAIRDE 61 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D YR+ G ++ G+ I++++ G+ H K V Sbjct: 62 DFFYPYYRDFGVLIQMGIPIDTILSQVFATATDNEIGRDMPDHFSLKKYNIGAVITPVAG 121 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 ++ TGIA+A KYR+ + FGDGA + + + N A ++ L +++ ENNQ+A+ Sbjct: 122 HLTSATGIAYAKKYRKESGSVITTFGDGATSTPDFHVAMNFAGVYKLPMVFFCENNQFAI 181 Query: 223 GTSV----SRASAQTNFSKRGV------SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +A QT RG S+ G+++DG + V KA+ A + Sbjct: 182 SVPTYPTDDKAFNQTYEETRGAIYKKAESYGFSGIRIDGTNFIEVYRATRKALE--NASE 239 Query: 273 GPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK- 330 PI+IE +TYR HS + DP YRT + + E S DP+ +K L K ++ D+K Sbjct: 240 DPILIEAMTYRMGPHSTADDPNKYRT-DRVPE-GSEKDPLIVSQKLLKDMKVITDLDIKQ 297 Query: 331 ---EIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 E+E K+I+ + + DKE LY + Sbjct: 298 INDEMEETTSKLIDTYEKAPKPDKETMMGNLYEE 331 >gi|23500271|ref|NP_699711.1| 2-oxoisovalerate dehydrogenase E1 component subunit alpha [Brucella suis 1330] gi|23463879|gb|AAN33716.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella suis 1330] Length = 410 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 153/325 (47%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 72 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 131 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHATLVFASTYKAPVVMNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 251 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ YR + E N+ DPI +++ L+ SE K+ E V I+ ++ Sbjct: 310 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQAEAEVMDIVVSA 368 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 369 QREAEAIGTLHDGRKPSMRDMFEDV 393 >gi|152984784|ref|YP_001347093.1| pyruvate dehydrogenase E1 component subunit alpha [Pseudomonas aeruginosa PA7] gi|150959942|gb|ABR81967.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Pseudomonas aeruginosa PA7] Length = 365 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 14/292 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR MLL R F++KA L G +G + +GQEA+ V + + D ++ YR+ Sbjct: 38 YRQMLLTRLFDQKAVALQRTGRIGTYAP-TLGQEAIGVAIGSQMRAEDVLVPYYRDTAVQ 96 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L GV I+ G + G + + F + Q G+A A + Sbjct: 97 LMRGVRMEDILLYWGGDERGSDYAEPLAAQDFPICVP-------IATQALHACGVASAFR 149 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 R ++ V GDGA ++G E+ N+A W L V++V+ NNQ+A+ Sbjct: 150 IRGEHRVAVTTCGDGATSKGDFLEALNVAGAWQLPVLFVVNNNQWAISVPRRIQCGAPTL 209 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 +++ V PG QVDG D+ AV + A+ R KGP ++E ++YR H+ +D A+ Sbjct: 210 AEKAVGAGCPGEQVDGNDVLAVAERVRAALERARQGKGPSLLECISYRLCDHTTADDASR 269 Query: 295 YRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGD---LKEIEMNVRKIINN 342 YR+ EE+++ +PI ++R L +W E + L E + V++ + Sbjct: 270 YRSAEEVSQA-WREEPIRRLRAFLAGRGQWDEEREQALLGECQARVQEAVER 320 >gi|21355903|ref|NP_649905.1| CG8199 [Drosophila melanogaster] gi|7299201|gb|AAF54398.1| CG8199 [Drosophila melanogaster] gi|15291395|gb|AAK92966.1| GH19141p [Drosophila melanogaster] gi|220945584|gb|ACL85335.1| CG8199-PA [synthetic construct] Length = 439 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 84/310 (27%), Positives = 142/310 (45%), Gaps = 4/310 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M+L+ ++ + G + F G+EA +G +L D + YRE G + Sbjct: 98 FRDMVLLNTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAALEMRDLIYGQYREAGVL 156 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G + + + G + +GK +H S + F + Q+ G A+A K Sbjct: 157 VWRGFRIDQFIDQCYGNTDDLGRGKQMPVHYGSRELNFVTISSPLSTQMPQAVGAAYAMK 216 Query: 176 YRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 R ++ CVVC FG+GAA++G + +FN AA I NN +A+ T Sbjct: 217 LRPNNDACVVCYFGEGAASEGDAHAAFNFAATLGCPAILFCRNNGFAISTPSHEQYKGDG 276 Query: 235 FSKRG-VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + RG + + I ++VDG D+ AV M A Y P++ E L YR HS SD + Sbjct: 277 IAGRGPMGYGITTIRVDGTDVFAVYNAMKAAREYVLKENKPVVFEALAYRVGHHSTSDDS 336 Query: 294 N-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR EEI S PI ++++ ++H W E E ++RK + + ++ + Sbjct: 337 TAYRPAEEIEIWNSVEHPISKLKRYMVHKGWFDETVENEYVKDIRKKVLKQIAVSEKKLK 396 Query: 353 PDPAELYSDI 362 P+ E++ + Sbjct: 397 PNWREMFEGV 406 >gi|225686316|ref|YP_002734288.1| 2-oxoisovalerate dehydrogenase subunit alpha [Brucella melitensis ATCC 23457] gi|256262546|ref|ZP_05465078.1| 2-oxoisovalerate dehydrogenase E1 component [Brucella melitensis bv. 2 str. 63/9] gi|225642421|gb|ACO02334.1| 2-oxoisovalerate dehydrogenase subunit alpha [Brucella melitensis ATCC 23457] gi|263092327|gb|EEZ16580.1| 2-oxoisovalerate dehydrogenase E1 component [Brucella melitensis bv. 2 str. 63/9] Length = 410 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 153/325 (47%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 72 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 131 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 251 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ YR + E N+ DPI +++ L+ SE K+ E V I+ ++ Sbjct: 310 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQAEAEVMDIVVSA 368 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 369 QREAEAIGKLHDGRKPSMRDMFEDV 393 >gi|194014662|ref|ZP_03053279.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Bacillus pumilus ATCC 7061] gi|194013688|gb|EDW23253.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Bacillus pumilus ATCC 7061] Length = 371 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 94/301 (31%), Positives = 152/301 (50%), Gaps = 19/301 (6%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 54 RRMVFTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLATHFALEKEDFILPGYRDVPQLI 112 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G+ +K S+G M N I+GAQ+ G+A K Sbjct: 113 WHGLPLTKAFL--------FSRGHFVGNQMPEDLNAL-SPQIIIGAQIIQAAGVALGLKK 163 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R + + + GDG A+QG YE N A + I+V++NN+YA+ T V + SA + Sbjct: 164 RGKNAVAITYTGDGGASQGDFYEGINFAGAYKAPAIFVVQNNRYAISTPVEKQSAAQTIA 223 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPAN 294 ++ + I G+QVDGMD AV A +A +GP +IE LT+RY H+M+ DP Sbjct: 224 QKAAAAGIVGVQVDGMDALAVYAATAEARERAVNGEGPTLIETLTFRYGPHTMAGDDPTR 283 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YRT+E+ NE DP+ + RK L NK W+ E + K IE + ++ I +++ ++D++ Sbjct: 284 YRTKEDENEW-EQKDPLVRYRK-FLENKGLWSEEEENKVIE-DAKEQIKQAIK--EADEQ 338 Query: 353 P 353 P Sbjct: 339 P 339 >gi|195572250|ref|XP_002104109.1| GD18623 [Drosophila simulans] gi|194200036|gb|EDX13612.1| GD18623 [Drosophila simulans] Length = 439 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 84/310 (27%), Positives = 141/310 (45%), Gaps = 4/310 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M+L+ ++ + G + F G+EA +G +L D + YRE G + Sbjct: 98 FRDMVLLNTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAALEMRDLIYGQYREAGVL 156 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G + + + G + +GK +H S + F + Q+ G A+A K Sbjct: 157 VWRGFRIDQFIDQCYGNTDDLGRGKQMPVHYGSRELNFVTISSPLSTQMPQAVGAAYAMK 216 Query: 176 YRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 R + CVVC FG+GAA++G + +FN AA I NN +A+ T Sbjct: 217 LRPDNDACVVCYFGEGAASEGDAHAAFNFAATLGCPTILFCRNNGFAISTPSHEQYKGDG 276 Query: 235 FSKRG-VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + RG + + I ++VDG D+ AV M A Y P++ E L YR HS SD + Sbjct: 277 IAGRGPMGYGITTIRVDGTDVFAVYNAMKAAREYVLKENKPVVFEALAYRVGHHSTSDDS 336 Query: 294 N-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR EEI S PI ++++ ++H W E E ++RK + + ++ + Sbjct: 337 TAYRPAEEIEIWNSVEHPISKLKRYMVHKGWFDETVENEYVKDIRKKVLKQIAVSEKKLK 396 Query: 353 PDPAELYSDI 362 P+ E++ + Sbjct: 397 PNWREMFEGV 406 >gi|17989093|ref|NP_541726.1| 2-oxoisovalerate dehydrogenase alpha subunit [Brucella melitensis bv. 1 str. 16M] gi|254691111|ref|ZP_05154365.1| 2-oxoisovalerate dehydrogenase alpha subunit [Brucella abortus bv. 6 str. 870] gi|254695582|ref|ZP_05157410.1| 2-oxoisovalerate dehydrogenase alpha subunit [Brucella abortus bv. 3 str. Tulya] gi|254699770|ref|ZP_05161598.1| 2-oxoisovalerate dehydrogenase alpha subunit [Brucella suis bv. 5 str. 513] gi|256043415|ref|ZP_05446348.1| 2-oxoisovalerate dehydrogenase alpha subunit [Brucella melitensis bv. 1 str. Rev.1] gi|256111575|ref|ZP_05452570.1| 2-oxoisovalerate dehydrogenase alpha subunit [Brucella melitensis bv. 3 str. Ether] gi|256256298|ref|ZP_05461834.1| 2-oxoisovalerate dehydrogenase alpha subunit [Brucella abortus bv. 9 str. C68] gi|260564621|ref|ZP_05835106.1| 2-oxoisovalerate dehydrogenase E1 component [Brucella melitensis bv. 1 str. 16M] gi|260756709|ref|ZP_05869057.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella abortus bv. 6 str. 870] gi|260882525|ref|ZP_05894139.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella abortus bv. 9 str. C68] gi|261215979|ref|ZP_05930260.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella abortus bv. 3 str. Tulya] gi|261750237|ref|ZP_05993946.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella suis bv. 5 str. 513] gi|265989839|ref|ZP_06102396.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella melitensis bv. 1 str. Rev.1] gi|265993052|ref|ZP_06105609.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella melitensis bv. 3 str. Ether] gi|294853678|ref|ZP_06794350.1| 2-oxoisovalerate dehydrogenase subunit alpha [Brucella sp. NVSL 07-0026] gi|306845876|ref|ZP_07478444.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella sp. BO1] gi|17984939|gb|AAL53990.1| 2-oxoisovalerate dehydrogenase alpha subunit [Brucella melitensis bv. 1 str. 16M] gi|260152264|gb|EEW87357.1| 2-oxoisovalerate dehydrogenase E1 component [Brucella melitensis bv. 1 str. 16M] gi|260676817|gb|EEX63638.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella abortus bv. 6 str. 870] gi|260872053|gb|EEX79122.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella abortus bv. 9 str. C68] gi|260917586|gb|EEX84447.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella abortus bv. 3 str. Tulya] gi|261739990|gb|EEY27916.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella suis bv. 5 str. 513] gi|262763922|gb|EEZ09954.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella melitensis bv. 3 str. Ether] gi|263000508|gb|EEZ13198.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella melitensis bv. 1 str. Rev.1] gi|294819333|gb|EFG36333.1| 2-oxoisovalerate dehydrogenase subunit alpha [Brucella sp. NVSL 07-0026] gi|306273768|gb|EFM55606.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella sp. BO1] Length = 410 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 153/325 (47%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 72 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 131 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 251 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ YR + E N+ DPI +++ L+ SE K+ E V I+ ++ Sbjct: 310 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQAEAEVMDIVVSA 368 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 369 QREAEAIGTLHDGRKPSMRDMFEDV 393 >gi|254482351|ref|ZP_05095591.1| Dehydrogenase E1 component superfamily protein [marine gamma proteobacterium HTCC2148] gi|214037356|gb|EEB78023.1| Dehydrogenase E1 component superfamily protein [marine gamma proteobacterium HTCC2148] Length = 327 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 87/313 (27%), Positives = 143/313 (45%), Gaps = 10/313 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +Q + YR M+ +F + + G + GF H G A VG L + D + Sbjct: 3 LTSDQMVLLYRNMVRADQFNKMMYRRMMQGKLIGFYHPAEGAIAPGVGASTFLNQDDNLS 62 Query: 107 TAYREHG--HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +R HG H+L G+D +AE TG++ G KG+ + H ++ Y G +G Sbjct: 63 PHHRGHGITHMLCKGIDIKYYLAEHTGKETGCCKGRS-AFHFSFPEHKVYMMSGFIGYNF 121 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + G FA K R ++ + C GDG+ QG+ +E+ ++ W L VI+ ENN ++ + Sbjct: 122 APVVGWGFAAKRRAQGQVVMNCSGDGSYGQGRAHEAMLMSQNWQLPVIFFCENNGMSIFS 181 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + Q N + F +P + VDG D+ AV +A+ R GP IE T R+ Sbjct: 182 TAQEMHPQENIASLADGFGMPSIIVDGQDVFAVAEASLQAIERARTGGGPTFIEAKTLRF 241 Query: 285 RGHSMSDP----ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 H + P R+ EE MR +PI +R+L + ++ ++ +I + I Sbjct: 242 NEHDIGTPDLSGWEERSAEEHEAMRKR-EPIRIATERVLGDSLLTQNEIDQIIEDALAEI 300 Query: 341 NNSVEFAQSDKEP 353 +FA D+ P Sbjct: 301 EAVEQFA--DESP 311 >gi|320107218|ref|YP_004182808.1| dehydrogenase E1 component [Terriglobus saanensis SP1PR4] gi|319925739|gb|ADV82814.1| dehydrogenase E1 component [Terriglobus saanensis SP1PR4] Length = 727 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 147/331 (44%), Gaps = 30/331 (9%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-D 103 + ++Q ++ YRLM L R+ +++ L + F C G EA++V M++ G D Sbjct: 19 APLTRQQLVAFYRLMYLSRKTDDREILLKRQQKIY-FQISCAGHEALLVAAGMAMKPGYD 77 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 YR+ LA G + + G S G+ H +T+ Q Sbjct: 78 WFFPYYRDRAICLALGNTVEDQLLQAVGADDPASGGRQMPSHWTNTRLHIVSPSSSTATQ 137 Query: 164 VSLGTGIA-------------------------FANKYRRSDKICVVCFGDGAANQGQVY 198 + G G A F N SD++ G+G+ +QG+ + Sbjct: 138 LLHGVGCAEAGVYFTKHPEAAAAGEFGDGDYRKFKNVTFHSDEVVYASVGEGSTSQGEFW 197 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAV 257 E+ N A+ L +I+V+E+N YA+ T V + N S+ +F N +VDG D A Sbjct: 198 EALNTASNAKLPIIFVVEDNGYAISTPVETNTPGGNISRLVANFPNFHFEEVDGTDAIAS 257 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRK 316 M +AVAYCRA KGP ++ R HS+SD YR EE+ E + DPI +++ Sbjct: 258 YEAMQRAVAYCRARKGPALVHGHVIRPYSHSLSDDERLYRVAEEL-EADALRDPISRMQV 316 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 LL N +E +L +E +V + + + A Sbjct: 317 HLLQNGILTEDELHTLERDVTAEVQQAADNA 347 >gi|239637673|ref|ZP_04678645.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus warneri L37603] gi|239596891|gb|EEQ79416.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus warneri L37603] Length = 333 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 91/320 (28%), Positives = 143/320 (44%), Gaps = 3/320 (0%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 ++ + +E + Y+ M L R+ +E+ L G + F GQEA +GM ++ + Sbjct: 4 YKSAGLTEEDLKNMYKWMDLGRKLDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYAMEQ 62 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIV 160 GD YR+ + G+ M G++ I S GK H K G V Sbjct: 63 GDISSPYYRDLAFVTYMGMKPLDTMLASFGKRDDINSGGKQMPSHYSHRKKGILSQSSPV 122 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q+ G A A K + I G+G++NQG +E N A + L + VI NN+Y Sbjct: 123 ATQIPHSVGAALALKMDKKPNIATATVGEGSSNQGDFHEGLNFAGVHQLPFVCVIINNKY 182 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ S A N S R + + + G+QVDG D A+ M ++ +G +IE + Sbjct: 183 AISVPDSLQYAAKNLSDRAIGYGMEGVQVDGNDPIAMYKAMKESRKRALNGEGATLIEAI 242 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 T R HS D YRT+EE + ++ I + + LL + L EIE + II Sbjct: 243 TTRMTAHSSDDDDKYRTQEERDGLKEADCNI-RFKNHLLDLGIIDDAWLTEIEQEHKDII 301 Query: 341 NNSVEFAQSDKEPDPAELYS 360 N++ + A+ P E Y+ Sbjct: 302 NHATKAAEEAPYPSVEEAYA 321 >gi|72080455|ref|YP_287513.1| pyruvate dehydrogenase E1-alpha subunit [Mycoplasma hyopneumoniae 7448] gi|71913579|gb|AAZ53490.1| pyruvate dehydrogenase E1-alpha subunit [Mycoplasma hyopneumoniae 7448] Length = 374 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 126/252 (50%), Gaps = 11/252 (4%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +K++ AY+ M+L R+ + QL G + F G+EA+ V M+LT+ D + Sbjct: 46 LSKQEIKKAYKFMVLSRQQDTYMTQLQRQGRMLTFAP-NFGEEALQVASGMALTKDDWFV 104 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 A+R + +L GV M G + G ++ + +G Q S Sbjct: 105 PAFRSNATMLYLGVPMILQMQYWNGSEKG---------NVIPENVNVLPINIPIGTQFSH 155 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GIA+A K + + G+G +G+ YE+ NIA++W V++ + NNQ+A+ T Sbjct: 156 AAGIAYAAKLTGKKIVSMSFIGNGGTAEGEFYEALNIASIWKWPVVFCVNNNQWAISTPN 215 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + + + + ++ IPG++VDG D+ A + +AV Y R+ GP+++E +T+R Sbjct: 216 KYENGASTIAAKAMAAGIPGIRVDGNDLLASYEVIKEAVDYARSGNGPVLVEFVTWRQGV 275 Query: 287 HSMSD-PANYRT 297 H+ SD P YRT Sbjct: 276 HTSSDNPRIYRT 287 >gi|323448731|gb|EGB04626.1| hypothetical protein AURANDRAFT_32248 [Aureococcus anophagefferens] Length = 333 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 4/285 (1%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F G+EA V L D++ YRE G +L G + + G + KG+ Sbjct: 26 FYMQAAGEEAATVCSAAGLEPDDEVFGQYREQGCLLWRGFGLQAMADQCIGNVDSLDKGR 85 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S F + Q+ TG A A K + D++ FG+GAA++G + + Sbjct: 86 VMPIHYGSKALRFQTISSPLATQIPHATGAALAVKLAKEDRVVACYFGEGAASEGDAHPA 145 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N AA + ++++ NN YA+ T A + R ++ + ++VDG D A A Sbjct: 146 LNFAATLRVPALFIVRNNGYAISTPSDEQFAGDGIAPRALALGMDAIRVDGNDALATVAA 205 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEM--RSNHDPIEQVRKR 317 + A A RA P ++E++TYR HS SD A+ YR +E+ + R+ H P++++R Sbjct: 206 VRDARARVRATGAPALVELMTYRLSHHSTSDDASKYRGADELKALSVRARH-PVDRLRAY 264 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + + D + R + +++ A++ +P L+ D+ Sbjct: 265 MAERGHWDDDDEASARADTRAEVRAALDAAEAKDKPHVDTLFDDV 309 >gi|303311655|ref|XP_003065839.1| 2-oxoisovalerate dehydrogenase alpha subunit, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105501|gb|EER23694.1| 2-oxoisovalerate dehydrogenase alpha subunit, putative [Coccidioides posadasii C735 delta SOWgp] Length = 408 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 87/292 (29%), Positives = 144/292 (49%), Gaps = 14/292 (4%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + VG +L+ D + YRE G G + M++L + KG+ Sbjct: 83 FYMVSAGEEGIAVGSAAALSPDDVVFAQYRETGVFQQRGFTLKQFMSQLFANKNDNGKGR 142 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR-----RSDKICVVC-FGDGAANQ 194 +H + + + Q+ +G A+A K + K V C FG+GAA++ Sbjct: 143 NMPVHYGGSNVKTHTISSTLATQIPHASGAAYALKLKALQNPNEPKQIVACYFGEGAASE 202 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + V+++ NN YA+ T + RGV + I ++VDG DI Sbjct: 203 GDFHAALNIAATRSCPVVFICRNNGYAISTPTLEQYRGDGIASRGVGYGIDTIRVDGNDI 262 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQ 313 AV+ +A ++ PI+IE ++YR HS SD + YR R E+ + + +PI + Sbjct: 263 FAVREVTKEARRMALENR-PILIEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIIR 321 Query: 314 VRKRLLHNKWASEGDL-KEIEMNVRKIINNSVEFAQSDKEPDPA--ELYSDI 362 +RK + NK DL +E +RK + EFA +++E PA EL++D+ Sbjct: 322 LRK-WMENKGIWNEDLERETREQLRKDV--LTEFAAAEREQKPAIKELFTDV 370 >gi|320039736|gb|EFW21670.1| 2-oxoisovalerate dehydrogenase alpha subunit [Coccidioides posadasii str. Silveira] Length = 444 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 87/292 (29%), Positives = 144/292 (49%), Gaps = 14/292 (4%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + VG +L+ D + YRE G G + M++L + KG+ Sbjct: 119 FYMVSAGEEGIAVGSAAALSPDDVVFAQYRETGVFQQRGFTLKQFMSQLFANKNDNGKGR 178 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR-----RSDKICVVC-FGDGAANQ 194 +H + + + Q+ +G A+A K + K V C FG+GAA++ Sbjct: 179 NMPVHYGGSNVKTHTISSTLATQIPHASGAAYALKLKALQNPNEPKQIVACYFGEGAASE 238 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + V+++ NN YA+ T + RGV + I ++VDG DI Sbjct: 239 GDFHAALNIAATRSCPVVFICRNNGYAISTPTLEQYRGDGIASRGVGYGIDTIRVDGNDI 298 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQ 313 AV+ +A ++ PI+IE ++YR HS SD + YR R E+ + + +PI + Sbjct: 299 FAVREVTKEARRMALENR-PILIEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIIR 357 Query: 314 VRKRLLHNKWASEGDL-KEIEMNVRKIINNSVEFAQSDKEPDPA--ELYSDI 362 +RK + NK DL +E +RK + EFA +++E PA EL++D+ Sbjct: 358 LRK-WMENKGIWNEDLERETREQLRKDV--LTEFAAAEREQKPAIKELFTDV 406 >gi|49259447|pdb|1V16|A Chain A, Crosstalk Between Cofactor Binding And The Phosphorylation Loop Conformation In The Bckd Machine gi|49259450|pdb|1V1M|A Chain A, Crosstalk Between Cofactor Binding And The Phosphorylation Loop Conformation In The Bckd Machine Length = 400 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 87/321 (27%), Positives = 142/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 106 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 107 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 167 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 227 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R S SD ++ +R+ +E+N PI ++R LL W E K R+ + Sbjct: 287 RIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 346 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 347 EAFEQAERKPKPNPNLLFSDV 367 >gi|71023181|ref|XP_761820.1| hypothetical protein UM05673.1 [Ustilago maydis 521] gi|46100843|gb|EAK86076.1| hypothetical protein UM05673.1 [Ustilago maydis 521] Length = 786 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 76/320 (23%), Positives = 153/320 (47%), Gaps = 4/320 (1%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E+ +++ + YR MLL+ + + G + F G+E ++G L Sbjct: 416 EMINITQQEAVKMYRTMLLLPQIDVILYNAQRQGRIS-FMMTSYGEEGAVIGSAAGLDAK 474 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D++ YRE G +L M+++ G + + G+ +H ST++ F+ + Sbjct: 475 DEVFAQYRESGVLLWRDFSIDHFMSQVFGAEDDLCGGRQMPIHFGSTQHHFHTISSPLAT 534 Query: 163 QVSLGTGIAFANKYR--RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q+ G +A K R + + FG+GAA++G + N+A+ + VI+ + NN + Sbjct: 535 QIPQAAGAGYALKRTKGREGNVVICYFGEGAASEGDFHAGMNLASTTSSPVIFFVRNNGF 594 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ T + + RG + + ++VDG D AV++ + A + + + P++IE + Sbjct: 595 AISTPAAEQFRGDGIASRGPGYGMLTIRVDGNDALAVRSAVQAAKSKALSEQRPVLIEAM 654 Query: 281 TYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR HS SD ++ YR+++ + + +P+ ++R L W ++ +E + RK Sbjct: 655 TYRVGHHSTSDDSSAYRSKQAVESWKQMDNPLHRMRNYLTDRGWWNDELEEETKAGHRKK 714 Query: 340 INNSVEFAQSDKEPDPAELY 359 + ++ A+ K P + L+ Sbjct: 715 VIEAMARAEKKKRPKLSSLF 734 >gi|194903058|ref|XP_001980807.1| GG16874 [Drosophila erecta] gi|190652510|gb|EDV49765.1| GG16874 [Drosophila erecta] Length = 439 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 84/310 (27%), Positives = 143/310 (46%), Gaps = 4/310 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M+L+ ++ + G + F G+EA +G +L D + YRE G + Sbjct: 98 FRDMVLLNTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAALEMRDLIYGQYREAGVL 156 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G + + + G + +GK +H S + F + Q+ G A+A K Sbjct: 157 VWRGFRIDQFIDQCYGNTNDLGRGKQMPVHYGSRELNFVTISSPLSTQMPQAVGAAYAMK 216 Query: 176 YRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + ++ CVVC FG+GAA++G + +FN AA VI NN +A+ T Sbjct: 217 LKPNNDACVVCYFGEGAASEGDAHAAFNFAATLGSPVILFCRNNGFAISTPSREQYRGDG 276 Query: 235 FSKRG-VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + RG + + I ++VDG D+ AV M A Y P++ E L YR HS SD + Sbjct: 277 IAGRGPMGYGIATIRVDGTDVFAVYNAMKAAREYVLKENKPVVFEALAYRVGHHSTSDDS 336 Query: 294 N-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR EEI S PI ++++ ++H W E E ++RK + + ++ + Sbjct: 337 TAYRPAEEIEVWNSVEHPISKLKRYMVHKGWFDEDVENEYVKDIRKKVLKQIAASEKKLK 396 Query: 353 PDPAELYSDI 362 P+ E++ + Sbjct: 397 PNWREMFEGV 406 >gi|119193965|ref|XP_001247586.1| hypothetical protein CIMG_01357 [Coccidioides immitis RS] Length = 444 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 87/292 (29%), Positives = 144/292 (49%), Gaps = 14/292 (4%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + VG +L+ D + YRE G G + M++L + KG+ Sbjct: 119 FYMVSAGEEGIAVGSAAALSPDDVVFAQYRETGVFQQRGFTLKQFMSQLFANKNDNGKGR 178 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR-----RSDKICVVC-FGDGAANQ 194 +H + + + Q+ +G A+A K + K V C FG+GAA++ Sbjct: 179 NMPVHYGGSNVKTHTISSTLATQIPHASGAAYALKLKALQNPNEPKQIVACYFGEGAASE 238 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + V+++ NN YA+ T + RGV + I ++VDG DI Sbjct: 239 GDFHAALNIAATRSCPVVFICRNNGYAISTPTLEQYRGDGIASRGVGYGIDTIRVDGNDI 298 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQ 313 AV+ +A ++ PI+IE ++YR HS SD + YR R E+ + + +PI + Sbjct: 299 FAVREVTKEARRMALENR-PILIEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIIR 357 Query: 314 VRKRLLHNKWASEGDL-KEIEMNVRKIINNSVEFAQSDKEPDPA--ELYSDI 362 +RK + NK DL +E +RK + EFA +++E PA EL++D+ Sbjct: 358 LRK-WMENKGIWNEDLERETREQLRKDV--LTEFAAAEREQKPAIKELFTDV 406 >gi|107022318|ref|YP_620645.1| 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) [Burkholderia cenocepacia AU 1054] gi|116689265|ref|YP_834888.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Burkholderia cenocepacia HI2424] gi|170732566|ref|YP_001764513.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Burkholderia cenocepacia MC0-3] gi|206559589|ref|YP_002230350.1| 2-oxoisovalerate dehydrogenase subunit alpha [Burkholderia cenocepacia J2315] gi|254245806|ref|ZP_04939127.1| 3-methyl-2-oxobutanoate dehydrogenase [Burkholderia cenocepacia PC184] gi|105892507|gb|ABF75672.1| branched-chain alpha-keto acid dehydrogenase E1 component [Burkholderia cenocepacia AU 1054] gi|116647354|gb|ABK07995.1| branched-chain alpha-keto acid dehydrogenase E1 component [Burkholderia cenocepacia HI2424] gi|124870582|gb|EAY62298.1| 3-methyl-2-oxobutanoate dehydrogenase [Burkholderia cenocepacia PC184] gi|169815808|gb|ACA90391.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Burkholderia cenocepacia MC0-3] gi|198035627|emb|CAR51514.1| 2-oxoisovalerate dehydrogenase alpha subunit [Burkholderia cenocepacia J2315] Length = 410 Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 149/330 (45%), Gaps = 10/330 (3%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G + + + ++ R ML R F+ + + F L +G+EA+ M+L Sbjct: 66 GPWAPDLDDARLIAGLRAMLKTRIFDARMMIAQRQKKIS-FYMLSLGEEAIGTAHAMALR 124 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 +GD YR+ ++A V +++ +L +G KG+ + + GF+ G + Sbjct: 125 DGDMCFPTYRQQSILIARDVPLERMICQLMSNEGDPLKGRQLPVMYSDREAGFFSISGNL 184 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q G A A+ + KI GDGA + + + A ++ V+ + NNQ+ Sbjct: 185 ATQFIQAVGWAMASAIKGDTKIASAWIGDGATAEADFHTALTFAHVYRAPVVLNVVNNQW 244 Query: 221 AMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 A+ T + A + T F+ RGV I ++VDG D A+ A A R + GP +IE Sbjct: 245 AISTFQAIAGGEGTTFAGRGVGCGIASLRVDGNDFLAIYAASSWAAERARRNLGPTLIEW 304 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL-HNKW---ASEGDLKEIEM 334 +TYR HS S DP YR ++ + DPIE+ ++ L+ W A + E+E Sbjct: 305 VTYRAGAHSTSDDPTKYRPSDDWSHFPLG-DPIERFKRHLIVKGIWSDSAHDALTAELEA 363 Query: 335 NVRKIINNSVEFAQ--SDKEPDPAELYSDI 362 V + ++ D+ P PA ++ D+ Sbjct: 364 EVIAAQKEAEKYGTLADDRIPSPASMFDDV 393 >gi|306840565|ref|ZP_07473321.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella sp. BO2] gi|306289432|gb|EFM60659.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella sp. BO2] Length = 410 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 152/325 (46%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+ +R ++ + G F +G+EAV + +L +GD Sbjct: 72 LTDEELKDGLRHMMTLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 131 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 251 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ YR + E N+ DPI +++ L+ SE K+ E V I+ ++ Sbjct: 310 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGLWSEERHKQAEAEVMDIVVSA 368 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 369 QREAEAIGTLHDGRKPSMRDMFEDV 393 >gi|118619020|ref|YP_907352.1| pyruvate dehydrogenase E1 component (alpha subunit) PdhA [Mycobacterium ulcerans Agy99] gi|118571130|gb|ABL05881.1| pyruvate dehydrogenase E1 component (alpha subunit) PdhA [Mycobacterium ulcerans Agy99] Length = 355 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 80/265 (30%), Positives = 130/265 (49%), Gaps = 14/265 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y +M++ R + + L G + F C GQEA VG L + D + YRE G Sbjct: 36 YEMMVVTRELDAEFINLKRQGELALFAS-CRGQEAAQVGATACLRKTDWLFPQYRELGAY 94 Query: 116 LACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 L G+ + A G GG+ K + + +G Q G A A Sbjct: 95 LVRGIPPGHVGAAWRGTWHGGLEFTKKCCVPISVP----------IGTQALHAVGAAQAA 144 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + D + V GDGA ++G V+E+ N AA+++ ++ ++NNQ+A+ VS+ +A + Sbjct: 145 QRLGEDSVTVAFLGDGATSEGDVHEALNFAAVFDAGCVFYVQNNQWAISVPVSKQTAAPS 204 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + + + + +PG++VDG D+ A A A A R GP +IE +TYR H+ + DP Sbjct: 205 IAHKAIGYGMPGIRVDGNDVLACYAVTAVAAARARRGDGPTLIEAVTYRVGAHTTADDPG 264 Query: 294 NYRTREEINEMRSNHDPIEQVRKRL 318 YR++EE++ + DPI + R L Sbjct: 265 RYRSQEEVDHWLA-LDPISRYRSYL 288 >gi|256001536|gb|ACU52092.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] Length = 184 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 104/182 (57%), Gaps = 3/182 (1%) Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 FE + + Y G+VGGF H IGQEAV + ++YR HG L + Sbjct: 1 EFEIRGEEAYLEGLVGGFSHSYIGQEAVATAAIACTGKDHWFFSSYRCHGVALLLDIPLR 60 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 ++ AEL G++ G + G+GGSMHM + GG GIVG Q+ L G AF+ KY+ S I Sbjct: 61 QLAAELLGKETGCALGRGGSMHMCGDR--LPGGFGIVGGQIPLAAGAAFSMKYQNSSSIS 118 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK-RGVSF 242 + GDGA QG +E+ N AL +L ++ +IENN ++MGT++ RA A+ ++ + +S+ Sbjct: 119 MCFIGDGAVAQGVFHETLNFVALHSLPLMLIIENNGWSMGTALHRAIAKQPIAESQAISY 178 Query: 243 NI 244 + Sbjct: 179 GL 180 >gi|241999616|ref|XP_002434451.1| pyruvate dehydrogenase, putative [Ixodes scapularis] gi|215497781|gb|EEC07275.1| pyruvate dehydrogenase, putative [Ixodes scapularis] Length = 453 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 87/326 (26%), Positives = 148/326 (45%), Gaps = 4/326 (1%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L+ + + +E L YR M L+ + + G + F G+E G + Sbjct: 91 LDPSQDPQLPEEMLLRMYRGMTLLNSMDRILYESQRQGRIS-FYMTNYGEEGTHFGSAPA 149 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L +GD + YRE G ++ G M++ G + KG+G +H S K F Sbjct: 150 LDDGDLVFGQYREAGVLVWRGYPLPMFMSQCYGNELDECKGRGMPVHYGSKKYNFVTISS 209 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + Q+ G A+A K + + CV+C FG+GAA++G + + N AA + VI+ N Sbjct: 210 PLATQMPQAVGSAYALKLAQKNN-CVICYFGEGAASEGDAHAALNFAATLDCPVIFFCRN 268 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N YA+ T RG + I ++VDG D+ AV +A K P++I Sbjct: 269 NGYAISTPAFEQYKGDGIVARGPGYGIASIRVDGNDVLAVYNVTKEARQIAVEEKRPVLI 328 Query: 278 EMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E +TYR HS SD ++ YR+ +E+ PI + RK L+ + + + Sbjct: 329 EAMTYRIGHHSTSDDSSAYRSVDEVRSWDQKDHPISRFRKYLVRRDLWDDDKEADWKNET 388 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDI 362 +K + + A+ K+P + +++D+ Sbjct: 389 KKQLMQAFARAEKLKKPPVSYMFTDV 414 >gi|116490424|ref|YP_809968.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Oenococcus oeni PSU-1] gi|290889833|ref|ZP_06552920.1| hypothetical protein AWRIB429_0310 [Oenococcus oeni AWRIB429] gi|116091149|gb|ABJ56303.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Oenococcus oeni PSU-1] gi|290480443|gb|EFD89080.1| hypothetical protein AWRIB429_0310 [Oenococcus oeni AWRIB429] Length = 378 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 79/285 (27%), Positives = 137/285 (48%), Gaps = 17/285 (5%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + E ++ + + ++ + MLL R+ + ++ +L G G F GQEA + + Sbjct: 41 KALERADLSDDDLINIFHNMLLNRQLDIRSTKLARQGRFGFFAPTA-GQEASQMASAYAF 99 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG----FYG 155 + D + YR+ I+A G K + G G + ++T +G + Sbjct: 100 HDEDWLFPGYRDIPEIVAKGWPIWKAILWSRGHVVG---------NEYTTDDGKEVNSWF 150 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 I+GAQ G+A K R + GDG +QG YE N AA ++ N ++ + Sbjct: 151 PQIIIGAQYVEAAGVALGLKKRNKKAVSYAYTGDGGTSQGDFYEGMNFAAAYHANEVFFV 210 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +NN +A+ T +A + + +G + +P + VDG D AV +A A+ + KGP+ Sbjct: 211 QNNGFAISTPRKLQTAAPHLAAKGWAVGVPSLVVDGQDAIAVYLAAKEARAWAVSGKGPV 270 Query: 276 IIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +IE LT R+ HS + DP YRT+E+I + DP+ ++RK + Sbjct: 271 LIETLTDRFEAHSTAGDDPLRYRTKEDIADWWKK-DPLIRMRKYI 314 >gi|224029197|gb|ACN33674.1| unknown [Zea mays] Length = 293 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 70/249 (28%), Positives = 119/249 (47%), Gaps = 1/249 (0%) Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +L G + + G + KG+ +H S + ++ + Q+ G A++ Sbjct: 13 LLWRGFTLQEFANQCFGNKLDYGKGRQMPIHYGSNRLNYFTVSSPIATQLPHAVGAAYSL 72 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + D + FGDG ++G + + N AA+ VI+ NN +A+ T + Sbjct: 73 KMDKKDACAITYFGDGGTSEGDFHAALNFAAVMEAPVIFFCRNNGWAISTPTTEQFRSDG 132 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 RG ++ I G++VDG D AV + + A PI++E LTYR HS SD + Sbjct: 133 VVIRGQAYGIRGIRVDGNDALAVYSAIHAAREMAVTEGRPILVEALTYRVGHHSTSDDST 192 Query: 295 -YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR +EI R+ DPI + RK + N W S+ + E+ VRK + +++ A+ +P Sbjct: 193 KYRPVDEIEHWRTARDPISRYRKWVQGNDWWSDAEESELRSRVRKELLQAIQVAERMPKP 252 Query: 354 DPAELYSDI 362 EL++D+ Sbjct: 253 PVTELFTDV 261 >gi|118587574|ref|ZP_01544998.1| PDH E1 component, alpha subunit [Oenococcus oeni ATCC BAA-1163] gi|118432025|gb|EAV38767.1| PDH E1 component, alpha subunit [Oenococcus oeni ATCC BAA-1163] Length = 378 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 79/285 (27%), Positives = 137/285 (48%), Gaps = 17/285 (5%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + E ++ + + ++ + MLL R+ + ++ +L G G F GQEA + + Sbjct: 41 KALERADLSDDDLINIFHNMLLNRQLDIRSTKLARQGRFGFFAPTA-GQEASQMASAYAF 99 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG----FYG 155 + D + YR+ I+A G K + G G + ++T +G + Sbjct: 100 HDEDWLFPGYRDIPEIVAKGWPIWKAILWSRGHVVG---------NEYTTDDGKEVNSWF 150 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 I+GAQ G+A K R + GDG +QG YE N AA ++ N ++ + Sbjct: 151 PQIIIGAQYVEAAGVALGLKKRNKKAVSYAYTGDGGTSQGDFYEGMNFAAAYHANEVFFV 210 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +NN +A+ T +A + + +G + +P + VDG D AV +A A+ + KGP+ Sbjct: 211 QNNGFAISTPRKLQTAAPHLAAKGWAVGVPSLVVDGQDAIAVYLAAKEARAWAVSGKGPV 270 Query: 276 IIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +IE LT R+ HS + DP YRT+E+I + DP+ ++RK + Sbjct: 271 LIETLTDRFEAHSTAGDDPLRYRTKEDIADWWKK-DPLIRMRKYI 314 >gi|86158863|ref|YP_465648.1| pyruvate dehydrogenase (lipoamide) [Anaeromyxobacter dehalogenans 2CP-C] gi|85775374|gb|ABC82211.1| pyruvate dehydrogenase (lipoamide) [Anaeromyxobacter dehalogenans 2CP-C] Length = 409 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 82/325 (25%), Positives = 154/325 (47%), Gaps = 15/325 (4%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + + ++ L+ +R ++ R + + L G +G F G+EA +VG ++ D Sbjct: 67 ATLSPQEALALHRHLVRARALDARMTALQRQGRIG-FYVGAEGEEACVVGAAAAMAPQDW 125 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YREH L G+ + L G G +++G+ H + + +G Q+ Sbjct: 126 LFPCYREHAAALLRGLPLDAFLCNLFGNVGDLARGRQMPCHETWREGHYASVSAPLGTQL 185 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G A+A + + D + + FGDGA + + + A + + V+++ N +A+ T Sbjct: 186 PHAVGAAWAARLKGDDMVALTWFGDGATSTHDFHTALGFAGVHRVPVVFLCRANGWAIST 245 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + +A +++G+++ + G +VDG D+ AV A +A A A +GP ++E +TYR Sbjct: 246 PTAMQTAAETIAQKGLAYGVRGERVDGNDLLAVHAAARRARARAAAGEGPTLLECVTYRV 305 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD----LKEIEMNVRKI 339 H+ S DP YR E+ R+ DP+E++R L + G L+E + +R Sbjct: 306 GPHTTSDDPRGYRDEAEVAPWRAR-DPVERLRAYLEATGALAPGAHAALLREADEEIRAA 364 Query: 340 INNSVEFAQSDKEPDPAE--LYSDI 362 + A+ + P PA L+ D+ Sbjct: 365 V------ARVEALPPPARESLFDDV 383 >gi|187607469|ref|NP_001119816.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial [Ovis aries] gi|182382500|gb|ACB87532.1| branched chain keto acid dehydrogenase E1 alpha polypeptide [Ovis aries] Length = 447 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L Y+ M L+ + + G + F G+E VG +L + Sbjct: 95 EDPHLPQEKVLKFYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDDT 153 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 154 DLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDLGKGRQMPVHYGCRERHFVTISSPLAT 213 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 214 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 273 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 274 STPTSEQYRGDGIAARGPGYGILSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 333 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R L W + K RK + Sbjct: 334 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHHLQSRGWWDDEQEKAWRKQSRKKVM 393 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P ++SD+ Sbjct: 394 EAFEQAERKLKPNPNLIFSDV 414 >gi|305666956|ref|YP_003863243.1| pyruvate dehydrogenase subunit beta [Maribacter sp. HTCC2170] gi|88709185|gb|EAR01419.1| pyruvate dehydrogenase beta subunit [Maribacter sp. HTCC2170] Length = 634 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 63/233 (27%), Positives = 118/233 (50%), Gaps = 1/233 (0%) Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 IGQEA+ VG+ ++ E + ++ +R G + +++ ++ G++ G +KG+ S H Sbjct: 22 IGQEAISVGVTSAMKEDEYILPMHRNLGVFTTRKIPLNRLFSQWQGKESGFTKGRDRSFH 81 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 + + G +G Q+ + GIA AN + + V G+GA ++G +E+ N+AA Sbjct: 82 FGTQEYNIVGMISHLGPQLGVADGIALANLLKNQKHVTAVFTGEGATSEGDFHEALNVAA 141 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 +W+L V++ IENN Y + T + + + +G + + VDG +I V +D Sbjct: 142 VWDLPVLFCIENNGYGLSTPTNEQFKCEHLADKGKGYGMESHIVDGNNILEVYTKIDSLC 201 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 R PI++E T+R RGH + Y + +++ + DP+E + L Sbjct: 202 KSIRKDPRPILVEFKTFRMRGHEEASGTKYVPQHLLDQWAAK-DPLENYLEYL 253 >gi|94502291|ref|ZP_01308771.1| Pyruvate dehydrogenase E1 component alpha subunit [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|94451157|gb|EAT14102.1| Pyruvate dehydrogenase E1 component alpha subunit [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] Length = 167 Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 62/152 (40%), Positives = 92/152 (60%), Gaps = 1/152 (0%) Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L V+++ ENN+YAMGTSV R+S + K G S+ +P VDGMD + A++ Sbjct: 2 LPVVFICENNRYAMGTSVKRSSNIKDIYKIGFSYKMPSFCVDGMDPLKIYEHAYNAISRA 61 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 R GP +++LTYRYRGHSM+D YR+++E+NE + N DPI ++K +L NK +E Sbjct: 62 RNGNGPTFLDILTYRYRGHSMTDAETYRSKKEVNESK-NRDPILLIKKFILKNKIVTEKV 120 Query: 329 LKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 L + + K IN V+FA+ + +LYS Sbjct: 121 LNSFQDEINKKINECVKFAELSDSTNIEKLYS 152 >gi|170571054|ref|XP_001891582.1| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor [Brugia malayi] gi|158603850|gb|EDP39622.1| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor, putative [Brugia malayi] Length = 341 Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 80/278 (28%), Positives = 136/278 (48%), Gaps = 4/278 (1%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EA +G +L + D + YRE G +L G M + G I GK +H Sbjct: 32 GEEAAQIGSTAALEDTDLIYGQYRETGSLLYRGFPLENFMHQCYGNAKDIGGGKQMPIHY 91 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 S+++ F + Q+ G A+A K ++ +I + FG+GAA++G + + N+A+ Sbjct: 92 GSSEHHFVTISSTLATQLPQAVGSAYAFKREKNGRIVLAYFGEGAASEGDAHGAMNMAST 151 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV-KATMDKAV 265 VI+ NN YA+ T + + + + + I ++VDG D+ AV AT KA Sbjct: 152 LKCPVIFFCRNNGYAISTPTTEQYGGDGIAGKAIGYGIHVIRVDGNDLIAVYNAT--KAA 209 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 PI+IE +TYR HS S D A YR+ EE+N + N +PI + R L + +W Sbjct: 210 RQMAMENEPILIEAMTYRLGHHSTSDDSAAYRSNEEVNIWQQNDNPIVRFRTVLQNMEWW 269 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++ + +K I + +A+ +P+ ++ D+ Sbjct: 270 NDEEEMAYRQKAQKEIMKAFLYAEKIPKPNILSMFDDV 307 >gi|300173682|ref|YP_003772848.1| pyruvate dehydrogenase E1 component subunit alpha [Leuconostoc gasicomitatum LMG 18811] gi|299888061|emb|CBL92029.1| pyruvate dehydrogenase E1 component, alpha subunit [Leuconostoc gasicomitatum LMG 18811] Length = 378 Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 79/285 (27%), Positives = 139/285 (48%), Gaps = 17/285 (5%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 E + ++ +E ++ + MLL R+ + ++ +L G G F GQEA + + Sbjct: 41 ESLQRAQLTEEDFINIMKRMLLSRQLDIRSTKLAKQGRFGFFAPTA-GQEASQMASSYAF 99 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG----FYG 155 + D ++ YR+ I+ G K + G G ++F+T+ G + Sbjct: 100 KDEDWLMPGYRDIPQIVVKGWPIWKAILWSRGHALG---------NVFTTEEGKPVNSWM 150 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 I+GAQ GIA K R+ D + G+G ++QG YE N A + N ++ I Sbjct: 151 PQIIIGAQYVEAAGIALGMKKRQKDAVAYAYTGEGGSSQGDFYEGVNFAGAYKANAVFFI 210 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +NN +A+ T + +A T+ + +G + +P + VDG D AV +A A+ + KGP+ Sbjct: 211 QNNGFAISTPRALQTAATHLAAKGWAAGVPSIVVDGNDPIAVYLASKEARAWATSGKGPV 270 Query: 276 IIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 +IE LT R HS + DP YRT+ +I+ +P+ ++R+ + Sbjct: 271 LIETLTNRLEAHSTAGDDPLRYRTQADIDAAW-KKEPLIRMRQYM 314 >gi|193290664|gb|ACF17640.1| putative branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Capsicum annuum] Length = 462 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 1/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F G+EAV + +L+ D ++ YRE G +L G + + G + KG+ Sbjct: 148 FYMTSFGEEAVNIASAAALSPQDFVLPQYREAGVLLWRGFTVQECTNQCFGNKDDKGKGR 207 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S K+ + Q+S G+A++ K + V GDG ++G + Sbjct: 208 QMPVHYGSNKHNVITISSPLATQISQAAGVAYSLKMDKRGACAVAFTGDGGTSEGDFHAG 267 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N AA+ VI++ NN +A+ T V +G+ + I ++VDG D+ AV + Sbjct: 268 LNFAAVMEAPVIFICRNNGWAISTPVHEQFRSDGVVAKGLGYGIRSIRVDGNDVIAVYSA 327 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A PI++E +TYR HS SD + YR EI ++ +PI +K + Sbjct: 328 IGAARNMAINEGRPILVEAMTYRVGHHSTSDDSTKYRPMNEIEYWKTARNPISIFKKYIE 387 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 W SE E+ NV+K + +++ A+ ++P E+++D+ Sbjct: 388 RYGWWSEDKESELARNVKKQVLEAIKTAEGMEKPALTEMFTDV 430 >gi|171682550|ref|XP_001906218.1| hypothetical protein [Podospora anserina S mat+] gi|170941234|emb|CAP66884.1| unnamed protein product [Podospora anserina S mat+] Length = 449 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 82/291 (28%), Positives = 136/291 (46%), Gaps = 8/291 (2%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 F + G+EAV V +LT+ D + YRE G G + S M +L KG Sbjct: 119 SFYMVSAGEEAVSVATASALTKDDVVFCQYREQGVFKQRGFELSDFMNQLFANVKDPGKG 178 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAAN 193 + +H S + + + Q+ +G A+A K +R ++ FG+GAA+ Sbjct: 179 RNMPVHYGSRELNIHTISSPLATQLPQASGAAYALKIQRMQNPEMPPRVVAAYFGEGAAS 238 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 +G + + NIAA + VI++ NN YA+ T + RG+ + I ++VDG D Sbjct: 239 EGDFHAALNIAATRSCPVIFICRNNGYAISTPSLEQYRGDGIASRGLGYGIETIRVDGND 298 Query: 254 IRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPI 311 AV+ KA G P++IE +TYR HS SD + YR R E+ + + +PI Sbjct: 299 FWAVREATKKARELALQDGGKPVLIEAMTYRVSHHSTSDDSFAYRARVEVEDWKRRDNPI 358 Query: 312 EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++RK + E KE ++R+ + + A+ K+P ++ D+ Sbjct: 359 ARLRKWMESKGIWDEQKEKEARDSIRRDVLKAFAEAEKLKKPAIKNMFEDV 409 >gi|309358626|emb|CAP33942.2| hypothetical protein CBG_15770 [Caenorhabditis briggsae AF16] Length = 432 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 80/284 (28%), Positives = 132/284 (46%), Gaps = 3/284 (1%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F G+E VG +L D + YRE G +L G M + G + KG+ Sbjct: 113 FYMTSFGEEGNHVGSAAALESHDLIYGQYREAGVLLWRGYSMENFMNQCYGNADDLGKGR 172 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD-KICVVCFGDGAANQGQVYE 199 MH + + F + Q+ G A+A K ++ + +I VV FGDGAA++G + Sbjct: 173 QMPMHFGAKERNFVTISSPLTTQLPQAVGSAYAFKQQKDNQRIVVVYFGDGAASEGDAHA 232 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 +FN AA +I+ NN YA+ T S + +G ++ + ++VDG D+ AV Sbjct: 233 AFNFAATLKCPIIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGNDLLAVYN 292 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 +A ++ P++IE +TYR HS SD + YR+ EE+ PI + K + Sbjct: 293 ATKEARRVALTNR-PVLIEAMTYRLGHHSTSDDSTAYRSAEEVETWGDKDHPITRFNKYI 351 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 W +E K+ + V+K + A+ K+ +L+ D+ Sbjct: 352 TERGWWNEEKEKDWQKEVKKRVLTEFSAAEKRKKAHYHDLFDDV 395 >gi|86563357|ref|NP_001033377.1| hypothetical protein Y39E4A.3 [Caenorhabditis elegans] gi|72056625|emb|CAJ21557.1| C. elegans protein Y39E4A.3b, confirmed by transcript evidence [Caenorhabditis elegans] Length = 432 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 154/346 (44%), Gaps = 9/346 (2%) Query: 19 PSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMV 78 P++ R + D +D + F+++ L Y+ M + + G + Sbjct: 58 PALPIYRVTNAVGDVIDKS-----QDPNFDEQTSLKMYKTMTQLNIMDRILYDSQRQGRI 112 Query: 79 GGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK 138 F G+E VG +L D + YRE G +L G M + G + K Sbjct: 113 S-FYMTSFGEEGNHVGSAAALEPQDLIYGQYREAGVLLWRGYTMENFMNQCYGNADDLGK 171 Query: 139 GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR-SDKICVVCFGDGAANQGQV 197 G+ MH + + F + Q+ G A+A K ++ +++I VV FGDGAA++G Sbjct: 172 GRQMPMHFGTKERNFVTISSPLTTQLPQAVGSAYAFKQQKDNNRIAVVYFGDGAASEGDA 231 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 + +FN AA +I+ NN YA+ T S + +G ++ + ++VDG D+ AV Sbjct: 232 HAAFNFAATLKCPIIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGNDLLAV 291 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRK 316 +A ++ P++IE +TYR HS SD + YR+ +E+ PI + +K Sbjct: 292 YNATKEARRVALTNR-PVLIEAMTYRLGHHSTSDDSTAYRSSDEVQTWGDKDHPITRFKK 350 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + W +E E + V+K + A+ K+ +L+ D+ Sbjct: 351 YITERGWWNEEKEMEWQKEVKKRVLTEFAAAEKRKKAHYHDLFEDV 396 >gi|328475023|gb|EGF45813.1| branched-chain alpha-keto acid dehydrogenase E1 subunit [Listeria monocytogenes 220] Length = 215 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 111/203 (54%), Gaps = 4/203 (1%) Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V Q GI A K + G+G++NQG +E N A++ L V++VI NNQ Sbjct: 6 VTTQFPHAAGIGLAAKMAGDEIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQ 65 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ S+ A S R + + IPG +VDG ++ V A +A R +GP +IE Sbjct: 66 YAISVPASKQYAAEKLSDRAIGYGIPGERVDGTNMGEVYAAFKRAADRARNGEGPTLIET 125 Query: 280 LTYRYRGH-SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 ++YR+ H S D ++YR+REE++E + DP++ + LL + +E + EIE ++ K Sbjct: 126 VSYRFTPHSSDDDDSSYRSREEVDEAKGK-DPLKIFQAELLEEGYLTEEKIAEIEKSIAK 184 Query: 339 IINNSVEFAQSD--KEPDPAELY 359 +N + ++A+S EP+ + LY Sbjct: 185 EVNEATDYAESAAYAEPESSLLY 207 >gi|297158838|gb|ADI08550.1| 3-methyl-2-oxobutanoate dehydrogenase E1-alpha chain [Streptomyces bingchenggensis BCW-1] Length = 376 Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 81/305 (26%), Positives = 140/305 (45%), Gaps = 20/305 (6%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR+ +A L G + + GQEA V + L E D + +YR+ + G+D Sbjct: 61 RRYNTQATALTRQGRLAVYPS-STGQEACQVAAGLVLREQDWLFPSYRDTLAAVVRGLDP 119 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 + L G + + T + Q+ G+A A + + D + Sbjct: 120 VHALTLLRGDWHSGYDPRDHRVAPLCTP---------LATQLPHAVGLAHAARLKGDDVV 170 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 + GDG ++G +E+ N AA+W V+++I+NN +A+ +++ +A + + + V + Sbjct: 171 ALALVGDGGTSEGDFHEALNFAAVWRAPVVFLIQNNGFAISVPLAKQTAAPSLAHKAVGY 230 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEI 301 +PG VDG D AV + +AV RA GP ++E +TYR H+ +D A YR+ E+ Sbjct: 231 GMPGRLVDGNDAVAVHQVLGEAVRRARAGGGPTLVEAVTYRLEAHTNADDATRYRSDAEV 290 Query: 302 NEMRSNHDPI----EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 R+ HDPI E +R R L + A + E ++ + D DP + Sbjct: 291 EAWRA-HDPITLLEEAMRDRGLLDDQAVQSARDAAE----RMAADLRTRMHQDPALDPMD 345 Query: 358 LYSDI 362 L+ D+ Sbjct: 346 LFEDV 350 >gi|256001424|gb|ACU52036.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] Length = 184 Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 105/182 (57%), Gaps = 3/182 (1%) Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 +FE + + Y G+VGGF H IGQEAV + ++YR HG L + Sbjct: 1 QFEIRGEEAYLEGLVGGFYHSYIGQEAVATAAIACTGKDHWFFSSYRCHGVALLLDIPLR 60 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 ++ AEL G++ G + G+GGSMHM + GG GIVG Q+ L G AF+ KY+ S I Sbjct: 61 QLAAELLGKETGCALGRGGSMHMCGDR--LPGGFGIVGGQIPLAAGAAFSMKYQNSSSIS 118 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK-RGVSF 242 + GDGA QG +E+ N AL +L ++ +IENN ++MGT++ RA A+ ++ + +S+ Sbjct: 119 MCFIGDGAVAQGVFHETLNFVALHSLPLMLIIENNGWSMGTALHRAIAKQPIAESQAISY 178 Query: 243 NI 244 + Sbjct: 179 GL 180 >gi|157692136|ref|YP_001486598.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Bacillus pumilus SAFR-032] gi|157680894|gb|ABV62038.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Bacillus pumilus SAFR-032] Length = 371 Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 94/301 (31%), Positives = 155/301 (51%), Gaps = 19/301 (6%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 54 RRMVFTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLATHFALEKEDFILPGYRDVPQLI 112 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G+ +K A L R + ++ S + I+GAQ+ G+A K Sbjct: 113 WHGLPLTK--AFLFSRGHFVGNQMPEDVYALSPQI-------IIGAQIIQAAGVALGLKK 163 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R + + + GDG A+QG YE N A + I+V++NN+YA+ T V + SA + Sbjct: 164 RGKNAVAITYTGDGGASQGDFYEGINFAGAYKAPAIFVVQNNRYAISTPVEKQSAAQTIA 223 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPAN 294 ++ + I G+QVDGMD AV A +A +GP +IE LT+RY H+M+ DP Sbjct: 224 QKAAAAGIVGVQVDGMDALAVYAATAEARERAVNGEGPTLIETLTFRYGPHTMAGDDPTR 283 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YRT+E+ NE DP+ + RK L NK W+ E + K IE + ++ I +++ ++D++ Sbjct: 284 YRTKEDENEW-EQKDPLVRYRK-FLENKGLWSEEEENKVIE-DAKEQIKQAIK--EADEQ 338 Query: 353 P 353 P Sbjct: 339 P 339 >gi|86563355|ref|NP_001033376.1| hypothetical protein Y39E4A.3 [Caenorhabditis elegans] gi|30145768|emb|CAA16329.2| C. elegans protein Y39E4A.3a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 431 Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 154/346 (44%), Gaps = 9/346 (2%) Query: 19 PSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMV 78 P++ R + D +D + F+++ L Y+ M + + G + Sbjct: 57 PALPIYRVTNAVGDVIDKS-----QDPNFDEQTSLKMYKTMTQLNIMDRILYDSQRQGRI 111 Query: 79 GGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK 138 F G+E VG +L D + YRE G +L G M + G + K Sbjct: 112 S-FYMTSFGEEGNHVGSAAALEPQDLIYGQYREAGVLLWRGYTMENFMNQCYGNADDLGK 170 Query: 139 GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR-SDKICVVCFGDGAANQGQV 197 G+ MH + + F + Q+ G A+A K ++ +++I VV FGDGAA++G Sbjct: 171 GRQMPMHFGTKERNFVTISSPLTTQLPQAVGSAYAFKQQKDNNRIAVVYFGDGAASEGDA 230 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 + +FN AA +I+ NN YA+ T S + +G ++ + ++VDG D+ AV Sbjct: 231 HAAFNFAATLKCPIIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGNDLLAV 290 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRK 316 +A ++ P++IE +TYR HS SD + YR+ +E+ PI + +K Sbjct: 291 YNATKEARRVALTNR-PVLIEAMTYRLGHHSTSDDSTAYRSSDEVQTWGDKDHPITRFKK 349 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + W +E E + V+K + A+ K+ +L+ D+ Sbjct: 350 YITERGWWNEEKEMEWQKEVKKRVLTEFAAAEKRKKAHYHDLFEDV 395 >gi|189191114|ref|XP_001931896.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973502|gb|EDU41001.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 466 Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 79/281 (28%), Positives = 132/281 (46%), Gaps = 8/281 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + +G +L+ D + YRE G L G S M +L G+ Sbjct: 128 FYMVSAGEEGIAIGSASALSPADVIFCQYRESGVYLQRGFPLSSFMNQLFANAKDNGLGR 187 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQ 194 +H S + + + Q+ G A+A K + ++ V FG+GAA++ Sbjct: 188 NMPVHYGSKELNIHTISSTLATQIPHAAGAAYALKMQNMQNPDTEPRVAVCFFGEGAASE 247 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + I++ NN YA+ T S + RG + I ++VDG DI Sbjct: 248 GDFHAALNIAATRQVPCIFICRNNGYAISTPTSDQYRGDGIASRGAGYGIATLRVDGNDI 307 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV+ +A + G P+++EM+ YR HS SD + YR R E+ + + +P+ Sbjct: 308 FAVRRATAEARKLALKNGGQPVLVEMMAYRVGHHSTSDDSFAYRQRVEVEDWKRRDNPLT 367 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++RK L + E KE+ RK + + E A+ +K+P Sbjct: 368 RLRKWLEGKQLWDEDREKELRGTTRKEVLRAFEEAEKEKKP 408 >gi|54020423|ref|YP_115778.1| pyruvate dehydrogenase E1-alpha subunit [Mycoplasma hyopneumoniae 232] gi|71893468|ref|YP_278914.1| pyruvate dehydrogenase E1-alpha subunit [Mycoplasma hyopneumoniae J] gi|21307824|gb|AAL34978.1| pyruvate dehydrogenase E1-alpha subunit [Mycoplasma hyopneumoniae] gi|53987596|gb|AAV27797.1| pyruvate dehydrogenase (lipoamide) e1-alpha chain [Mycoplasma hyopneumoniae 232] gi|71851595|gb|AAZ44203.1| pyruvate dehydrogenase E1-alpha subunit [Mycoplasma hyopneumoniae J] gi|312601146|gb|ADQ90401.1| Pyruvate dehydrogenase E1-alpha subunit [Mycoplasma hyopneumoniae 168] Length = 374 Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 125/252 (49%), Gaps = 11/252 (4%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +K++ AY M+L R+ + QL G + F G+EA+ V M+LT+ D + Sbjct: 46 LSKQEIKKAYEFMVLSRQQDTYMTQLQRQGRMLTFAP-NFGEEALQVASGMALTKDDWFV 104 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 A+R + +L GV M G + G ++ + +G Q S Sbjct: 105 PAFRSNATMLYLGVPMILQMQYWNGSEKG---------NVIPENVNVLPINIPIGTQFSH 155 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GIA+A K + + G+G +G+ YE+ NIA++W V++ + NNQ+A+ T Sbjct: 156 AAGIAYAAKLTGKKIVSMSFIGNGGTAEGEFYEALNIASIWKWPVVFCVNNNQWAISTPN 215 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + + + + ++ IPG++VDG D+ A + +AV Y R+ GP+++E +T+R Sbjct: 216 KYENGASTIAAKAMAAGIPGIRVDGNDLLASYEVIKEAVDYARSGNGPVLVEFVTWRQGV 275 Query: 287 HSMSD-PANYRT 297 H+ SD P YRT Sbjct: 276 HTSSDNPRIYRT 287 >gi|220912169|ref|YP_002487478.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Arthrobacter chlorophenolicus A6] gi|219859047|gb|ACL39389.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Arthrobacter chlorophenolicus A6] Length = 395 Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 88/285 (30%), Positives = 136/285 (47%), Gaps = 18/285 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + E S + M +IRR + +A L G + + L +GQEA +G SL D Sbjct: 53 VQDITDEHLCSLFEDMTVIRRIDVEATALQRQGELALWPPL-LGQEAAQIGSGRSLRSDD 111 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + ++YRE+G GVD + ++ G G +++M + + I+GAQ Sbjct: 112 FVFSSYRENGVAYCRGVDLTDLLRVWRGNASG--GWDPYAINMATPQI-------IIGAQ 162 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A + +D + V FGDGA ++G V E+ AA + V++ NN +A+ Sbjct: 163 TLHATGYAMGIQNDGADSVAVTYFGDGATSEGDVNEALVFAASFQAPVVFFCTNNHWAIS 222 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V R + + R F IP ++VDG D+ AV A A+ R GP IE +TYR Sbjct: 223 EPV-RLQSHIQLADRAAGFGIPSLRVDGNDVLAVMAATRVALDRARRGGGPTFIEAVTYR 281 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQV-----RKRLLHNK 322 H+ + DP YR E+ + + DPI +V RK LL ++ Sbjct: 282 MGPHTTADDPTRYRDANELEDWAAK-DPISRVAALLERKGLLTDE 325 >gi|295397403|ref|ZP_06807492.1| pyruvate dehydrogenase complex E1 component alpha subunit [Aerococcus viridans ATCC 11563] gi|294974367|gb|EFG50105.1| pyruvate dehydrogenase complex E1 component alpha subunit [Aerococcus viridans ATCC 11563] Length = 367 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 88/308 (28%), Positives = 147/308 (47%), Gaps = 17/308 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + E+ + + M+ R E++ L G +G F +GQEA + + T+ D Sbjct: 37 MPDLSDEELVELMKRMVFSRTLHERSMALAKQGRLG-FYAPTLGQEASQMASSYAFTKDD 95 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YR+ ++A G+ S+ G G + + I+GAQ Sbjct: 96 WLFPGYRDIPQLIAHGLKISQAFLWSRGHVEG---------NNYPADLNAMPPQIIIGAQ 146 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A A K + GDG ++QG VYE N A+ + V++ I+NN +A+ Sbjct: 147 YIQAMGSARAQKLNGDKAVTFTYTGDGGSSQGDVYEGMNYASRYKAPVVFFIQNNGFAIS 206 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + +A +++ VS IPG+QVDG D AV A +A + A GP++IE +T R Sbjct: 207 TPRYKQTAAETLAQKAVSVGIPGIQVDGNDALAVYAVSKQAREWALAGNGPVLIETVTNR 266 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKI 339 HS S DP YRT+E+I+ + +P+ ++R L K W+ E + + +E VR+ Sbjct: 267 LGAHSTSGDDPKIYRTQEDIDSW-TKREPLIRMRA-FLEGKGLWSEEIENEYVE-QVREE 323 Query: 340 INNSVEFA 347 I + + A Sbjct: 324 IKEAAKEA 331 >gi|311029758|ref|ZP_07707848.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Bacillus sp. m3-13] Length = 371 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 94/314 (29%), Positives = 149/314 (47%), Gaps = 19/314 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + +Q R M+ R ++++ L G +G F GQEA + + +L D Sbjct: 41 MPELSDDQLKELMRRMVYTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASQFALEADD 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + S+G M N I+GAQ Sbjct: 100 FILPGYRDVPQMIWHGLPLYQAFL--------FSRGHFHGNQMPEGVN-LLPPQIIIGAQ 150 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K + + + GDG A+QG YE N A + I+V++NN++A+ Sbjct: 151 IIQTAGVALGLKKKGKKTVAITYTGDGGASQGDFYEGINFAGAYQAPAIFVVQNNRFAIS 210 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T V + SA +++ V+ IPG+QVDGMD AV A A +GP +IE LTYR Sbjct: 211 TPVEKQSAAGTIAQKAVAAGIPGIQVDGMDALAVYAATRDARERAVNGEGPTLIETLTYR 270 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKI 339 Y H+M+ DP YRT E+++ DP+ + RK L NK W+ + + K IE I Sbjct: 271 YGPHTMAGDDPTRYRT-SELDDEWEKKDPLVRFRK-FLENKGIWSEDAENKVIEEAKEDI 328 Query: 340 INNSVEFAQSDKEP 353 V ++D +P Sbjct: 329 ---KVAIKKADDQP 339 >gi|158291301|ref|XP_312823.4| AGAP003136-PA [Anopheles gambiae str. PEST] gi|157017709|gb|EAA08445.5| AGAP003136-PA [Anopheles gambiae str. PEST] Length = 415 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 81/309 (26%), Positives = 142/309 (45%), Gaps = 3/309 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M+L+ ++ + G + F G+EA +G +L+ D + YRE G + Sbjct: 75 FRDMVLLNTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAALSLEDWVYGQYREAGVL 133 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G S + + G KG+ +H S K F +G Q+ G A+A K Sbjct: 134 VWRGFTISDFINQCYGNAEDQGKGRQMPVHYGSRKLNFVTISSPLGTQIPQAAGAAYAFK 193 Query: 176 YRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + +++ CV+ FG+GAA++G + +FN AA + VI+ NN +A+ T Sbjct: 194 LQPNNQRCVITYFGEGAASEGDTHAAFNFAATLDSPVIFFCRNNGFAISTPSKEQYRGDG 253 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + R + + ++ DG D+ A A Y PI++E + YR HS SD + Sbjct: 254 IAGRAAGYGMAALRFDGTDVFATYNATKLAREYVLRENKPIVLEAMAYRIGHHSTSDDST 313 Query: 295 -YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR EE+ + PI +++ +L W E E +VRK + + + ++ +P Sbjct: 314 AYRPAEELEVWNTVEHPIAKLKHYMLRRGWFDEAKENEFVKSVRKQVLSQINQSERILKP 373 Query: 354 DPAELYSDI 362 D E++ D+ Sbjct: 374 DWREMFQDV 382 >gi|15966685|ref|NP_387038.1| 2-oxoisovalerate dehydrogenase alpha subunit protein [Sinorhizobium meliloti 1021] gi|307321156|ref|ZP_07600560.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Sinorhizobium meliloti AK83] gi|15075957|emb|CAC47511.1| Probable 2-oxoisovalerate dehydrogenase alpha subunit [Sinorhizobium meliloti 1021] gi|306893231|gb|EFN24013.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Sinorhizobium meliloti AK83] Length = 410 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 83/284 (29%), Positives = 138/284 (48%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E+ L+ R M+L+R F+ + G F +G+EAV + +L +GD Sbjct: 72 LSDEELLTGLRHMMLLRAFDARMLMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A ++M ++ + G+ + S ++GF+ G + Q Sbjct: 131 PTYRQAGLLIADDYPMVEMMNQIFSNELDPCHGRQLPVMYTSKEHGFFTISGNLATQYVQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ + +I GDG+ + + + A+ + VI I NNQ+A+ T Sbjct: 191 AVGWAMASAIKNDTRIAAGWIGDGSTAESDFHSALVFASTYKAPVILNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG+ F IP ++VDG D AV A A R + GP +IE +TYR Sbjct: 251 GIARGGSGT-FAARGLGFGIPALRVDGNDYLAVYAVARWAAERARLNLGPTLIEYVTYRV 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASE 326 HS S DP+ YR + E +E DP+ +++K L L W+ E Sbjct: 310 GAHSTSDDPSAYRPKTE-SEAWPLGDPVLRLKKHLILRGAWSEE 352 >gi|254711726|ref|ZP_05173537.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella pinnipedialis B2/94] gi|261319354|ref|ZP_05958551.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella pinnipedialis B2/94] gi|261298577|gb|EEY02074.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella pinnipedialis B2/94] Length = 410 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 88/325 (27%), Positives = 153/325 (47%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 72 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 131 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 251 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ YR + E N+ DPI +++ L+ SE K+ + V I+ ++ Sbjct: 310 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQADAEVMDIVVSA 368 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 369 QREAEAIGTLHDGRKPSMRDMFEDV 393 >gi|256001420|gb|ACU52034.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001422|gb|ACU52035.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001426|gb|ACU52037.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001428|gb|ACU52038.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001430|gb|ACU52039.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001432|gb|ACU52040.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001434|gb|ACU52041.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001436|gb|ACU52042.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001438|gb|ACU52043.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001440|gb|ACU52044.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001442|gb|ACU52045.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001444|gb|ACU52046.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001446|gb|ACU52047.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001448|gb|ACU52048.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001450|gb|ACU52049.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001452|gb|ACU52050.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001454|gb|ACU52051.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001456|gb|ACU52052.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001458|gb|ACU52053.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001460|gb|ACU52054.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001462|gb|ACU52055.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001464|gb|ACU52056.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001466|gb|ACU52057.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001468|gb|ACU52058.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001470|gb|ACU52059.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001472|gb|ACU52060.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001474|gb|ACU52061.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001476|gb|ACU52062.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001478|gb|ACU52063.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001480|gb|ACU52064.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001482|gb|ACU52065.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001484|gb|ACU52066.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001486|gb|ACU52067.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001488|gb|ACU52068.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001490|gb|ACU52069.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001492|gb|ACU52070.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001494|gb|ACU52071.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001496|gb|ACU52072.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001498|gb|ACU52073.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001500|gb|ACU52074.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001502|gb|ACU52075.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001504|gb|ACU52076.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001506|gb|ACU52077.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001508|gb|ACU52078.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001510|gb|ACU52079.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001512|gb|ACU52080.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001514|gb|ACU52081.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001516|gb|ACU52082.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001518|gb|ACU52083.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001520|gb|ACU52084.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001524|gb|ACU52086.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001526|gb|ACU52087.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001528|gb|ACU52088.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001530|gb|ACU52089.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001532|gb|ACU52090.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001540|gb|ACU52094.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001542|gb|ACU52095.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001544|gb|ACU52096.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001546|gb|ACU52097.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001548|gb|ACU52098.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001552|gb|ACU52100.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001554|gb|ACU52101.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001556|gb|ACU52102.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001558|gb|ACU52103.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001560|gb|ACU52104.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001562|gb|ACU52105.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001564|gb|ACU52106.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001566|gb|ACU52107.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001568|gb|ACU52108.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001570|gb|ACU52109.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001572|gb|ACU52110.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001574|gb|ACU52111.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001576|gb|ACU52112.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001578|gb|ACU52113.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001580|gb|ACU52114.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001582|gb|ACU52115.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001584|gb|ACU52116.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001586|gb|ACU52117.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001588|gb|ACU52118.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001590|gb|ACU52119.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001592|gb|ACU52120.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] Length = 184 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 104/182 (57%), Gaps = 3/182 (1%) Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 FE + + Y G+VGGF H IGQEAV + ++YR HG L + Sbjct: 1 EFEIRGEEAYLEGLVGGFYHSYIGQEAVATAAIACTGKDHWFFSSYRCHGVALLLDIPLR 60 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 ++ AEL G++ G + G+GGSMHM + GG GIVG Q+ L G AF+ KY+ S I Sbjct: 61 QLAAELLGKETGCALGRGGSMHMCGDR--LPGGFGIVGGQIPLAAGAAFSMKYQNSSSIS 118 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK-RGVSF 242 + GDGA QG +E+ N AL +L ++ +IENN ++MGT++ RA A+ ++ + +S+ Sbjct: 119 MCFIGDGAVAQGVFHETLNFVALHSLPLMLIIENNGWSMGTALHRAIAKQPIAESQAISY 178 Query: 243 NI 244 + Sbjct: 179 GL 180 >gi|161620586|ref|YP_001594472.1| 2-oxoisovalerate dehydrogenase subunit alpha [Brucella canis ATCC 23365] gi|260568182|ref|ZP_05838651.1| 2-oxoisovalerate dehydrogenase E1 component [Brucella suis bv. 4 str. 40] gi|161337397|gb|ABX63701.1| 2-oxoisovalerate dehydrogenase subunit alpha [Brucella canis ATCC 23365] gi|260154847|gb|EEW89928.1| 2-oxoisovalerate dehydrogenase E1 component [Brucella suis bv. 4 str. 40] Length = 410 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 88/325 (27%), Positives = 152/325 (46%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 72 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 131 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 AVGWAMASAINHDTKIAAAWIGDGSTAESDFHATLVFASTYKAPVVMNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 251 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ YR + E N+ DPI +++ L+ E K+ E V I+ ++ Sbjct: 310 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWPEERHKQAEAEVMDIVVSA 368 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 369 QREAEAIGTLHDGRKPSMRDMFEDV 393 >gi|256029642|ref|ZP_05443256.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella pinnipedialis M292/94/1] gi|256157791|ref|ZP_05455709.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella ceti M490/95/1] gi|256253244|ref|ZP_05458780.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella ceti B1/94] gi|261220357|ref|ZP_05934638.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella ceti B1/94] gi|265986645|ref|ZP_06099202.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella pinnipedialis M292/94/1] gi|265996296|ref|ZP_06108853.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella ceti M490/95/1] gi|260918941|gb|EEX85594.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella ceti B1/94] gi|262550593|gb|EEZ06754.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella ceti M490/95/1] gi|264658842|gb|EEZ29103.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella pinnipedialis M292/94/1] Length = 410 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 88/325 (27%), Positives = 153/325 (47%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 72 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 131 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 251 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ YR + E N+ DPI +++ L+ SE K+ + V I+ ++ Sbjct: 310 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQADAEVMDIVVSA 368 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 369 QREAEAIGTLHDGRKPSMRDMFEDV 393 >gi|195499464|ref|XP_002096959.1| GE25960 [Drosophila yakuba] gi|194183060|gb|EDW96671.1| GE25960 [Drosophila yakuba] Length = 439 Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 83/310 (26%), Positives = 143/310 (46%), Gaps = 4/310 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M+L+ ++ + G + F G+EA +G +L D + YRE G + Sbjct: 98 FRDMVLLNTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAALEMRDLIYGQYREAGVL 156 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G + + + G + +GK +H S + F + Q+ G A+A K Sbjct: 157 VWRGFRIDQFIDQCYGNTEDLGRGKQMPVHYGSRELNFVTISSPLSTQMPQAVGAAYAMK 216 Query: 176 YRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + ++ CVVC FG+GAA++G + +FN AA VI NN +A+ T Sbjct: 217 LKPNNDACVVCYFGEGAASEGDAHAAFNFAATLGSPVILFCRNNGFAISTPSHEQYRGDG 276 Query: 235 FSKRG-VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + RG + + I ++VDG D+ AV M A Y P++ E L YR HS SD + Sbjct: 277 IAGRGPMGYGITTIRVDGTDVFAVYNAMKAAREYVLKENKPVVFEALAYRVGHHSTSDDS 336 Query: 294 N-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR EEI + PI ++++ ++H W E E ++RK + + ++ + Sbjct: 337 TAYRPAEEIEVWNTVEHPISKLKRYMVHKGWFDEDVENEYVKDIRKKVLKQIAVSEKKLK 396 Query: 353 PDPAELYSDI 362 P+ E++ + Sbjct: 397 PNWREMFEGV 406 >gi|282890227|ref|ZP_06298757.1| hypothetical protein pah_c014o103 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499884|gb|EFB42173.1| hypothetical protein pah_c014o103 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 360 Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 85/312 (27%), Positives = 143/312 (45%), Gaps = 5/312 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 + Y M+ R +++ L G + F +G+EA V +L D M YRE Sbjct: 29 IRGYETMVQTRSVDDRMITLQRQGSIS-FALSSLGEEACAVASAAALDLADWMYPQYREL 87 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G + G + + + G + + G+ H S +G ++ G A+ Sbjct: 88 GVMFWRGFTIQQYLHHMFGNKEDLIMGRQMPNHFGSKALNVVPVSSPIGTKIPHAAGCAY 147 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K ++ + + V FGDGA ++G + N AA+ I+ NN YA+ T + A Sbjct: 148 AMKIQKEEAVAVAYFGDGATSEGDFHVGLNFAAVRKAPAIFFCRNNGYAISTPCTSQFAS 207 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-D 291 +G+ + I +VDG D AV T+ KA C GPI+IE +TYR HS S D Sbjct: 208 DGIYPKGIGYGIQAFRVDGNDFFAVHETVAKAKQLCLEGHGPILIEAMTYRMGAHSTSDD 267 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINNSVEFAQSD 350 P+ YR+ EE+ N P+ ++R L K W +E + + + ++K I+ +++ A+ Sbjct: 268 PSRYRSEEEVKSW-ENKCPVRRLRLYLESKKLWNAEKE-EALLAKIKKEIDEAIQVAKKT 325 Query: 351 KEPDPAELYSDI 362 + P + D+ Sbjct: 326 EHPPLHSMIEDV 337 >gi|220916623|ref|YP_002491927.1| Pyruvate dehydrogenase (acetyl-transferring) [Anaeromyxobacter dehalogenans 2CP-1] gi|219954477|gb|ACL64861.1| Pyruvate dehydrogenase (acetyl-transferring) [Anaeromyxobacter dehalogenans 2CP-1] Length = 410 Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 83/325 (25%), Positives = 151/325 (46%), Gaps = 15/325 (4%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + + L+ +R ++ R + + L G +G F G+EA +VG ++ D Sbjct: 68 ATLTPAEALALHRHLVRARALDARMTALQRQGRIG-FYVGAEGEEACVVGAAAAMAPQDW 126 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YREH L G+ + L G G +++G+ H + +G Q+ Sbjct: 127 LFPCYREHAAALLRGLPLDAFLCNLFGNSGDLARGRQMPCHETWRAGHYASVSAPLGTQL 186 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G A+A + + D + + FGDGA + + + A + + V+++ N +A+ T Sbjct: 187 PHAVGAAWAARLKGEDMVSLTWFGDGATSTHDFHTALGFAGVHRVPVVFLCRANGWAIST 246 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + +A +++G+++ + G +VDG D+ AV A +A A A +GP ++E +TYR Sbjct: 247 PTAMQTAAETIAQKGIAYGVRGERVDGNDLLAVHAATRRARARAAAGEGPTLLECVTYRV 306 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD----LKEIEMNVRKI 339 H+ S DP YR E+ R+ DPIE++R L + G L+E + +R Sbjct: 307 GPHTTSDDPRGYRDEAEVAPWRAR-DPIERLRVHLERIGALAPGAHAALLREADEEIRAA 365 Query: 340 INNSVEFAQSDKEPDPAE--LYSDI 362 + A+ + P PA L+ D+ Sbjct: 366 V------ARVEALPPPARESLFDDV 384 >gi|228935287|ref|ZP_04098113.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229157550|ref|ZP_04285627.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus ATCC 4342] gi|229198089|ref|ZP_04324800.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus m1293] gi|228585387|gb|EEK43494.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus m1293] gi|228626000|gb|EEK82750.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus ATCC 4342] gi|228824452|gb|EEM70258.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 356 Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 98/318 (30%), Positives = 153/318 (48%), Gaps = 27/318 (8%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + +Q R M+ R ++++ L G +G F GQEA + +L D Sbjct: 26 MPELSDDQLKELMRRMVYTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHFALEAED 84 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + S+G M N I+GAQ Sbjct: 85 FILPGYRDVPQLVWHGLPLYQAFL--------FSRGHFMGNQMPENVNAL-APQIIIGAQ 135 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K R + + GDG A+QG YE N A + I+V++NN+YA+ Sbjct: 136 IIQTAGVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAIS 195 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH----KGPIIIEM 279 T V + SA +++ V+ I G+QVDGMD AV A A A+ R +GP +IE Sbjct: 196 TPVEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYA----ATAFARERAVNGEGPTLIET 251 Query: 280 LTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMN 335 LT+RY H+M+ DP YRT++ NE DPI + R L NK W+ E + K IE Sbjct: 252 LTFRYGPHTMAGDDPTRYRTKDIENEW-EQKDPIVRFRA-FLENKGLWSQEVEEKVIE-E 308 Query: 336 VRKIINNSVEFAQSDKEP 353 ++ I ++ A++D+ P Sbjct: 309 AKEDIKQAI--AKADQAP 324 >gi|296110721|ref|YP_003621102.1| PDH E1 component alpha subunit [Leuconostoc kimchii IMSNU 11154] gi|295832252|gb|ADG40133.1| PDH E1 component alpha subunit [Leuconostoc kimchii IMSNU 11154] Length = 378 Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 17/268 (6%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 + MLL R+ + ++ +L G G F GQEA + + + D ++ YR+ I+ Sbjct: 58 KRMLLSRQLDIRSTKLAKQGRFGFFAPTA-GQEASQMASSYAFNDDDWLMPGYRDIPEIV 116 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG----FYGGHGIVGAQVSLGTGIAF 172 G K + G G ++F+T++G + I+GAQ GIA Sbjct: 117 VKGWPIWKAILWSRGHVLG---------NVFTTEDGKPVNSWMPQIIIGAQYVEAAGIAL 167 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 K R+ D + GDG ++QG YE N A + N ++ I+NN +A+ T +A Sbjct: 168 GLKKRQKDAVAYAYTGDGGSSQGDFYEGVNFAGAYKANAVFFIQNNGFAISTPRELQTAA 227 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-- 290 T+ + +G S +P + VDG D AV +A A+ + GP++IE LT R HS + Sbjct: 228 THLAAKGWSAGVPSIVVDGNDPVAVYLASKEARAWAVSGHGPVLIETLTNRLEAHSTAGD 287 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRL 318 DP YR +E+I+ +P+ ++RK + Sbjct: 288 DPLRYREQEDIDTWW-QKEPLLRMRKYM 314 >gi|167465151|ref|ZP_02330240.1| branched-chain alpha-keto acid dehydrogenase E1 component alpha chain (2-oxoisovalerate dehydrogenase alpha subunit) [Paenibacillus larvae subsp. larvae BRL-230010] Length = 323 Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 92/313 (29%), Positives = 146/313 (46%), Gaps = 16/313 (5%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 ++ Y+ M+ R+++E++ L G + F IGQEA VG +L G D + YR+ Sbjct: 11 INMYKKMVSARKYDERSVLLQRAGKIP-FHVSGIGQEAAQVGAAFALDLGQDYFLPYYRD 69 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG-FYGGHGIVGAQVSLGTGI 170 + +L+ G+ +M + +S G FS K G V QV G Sbjct: 70 YAFVLSVGITLKDLMLSAFAKAEDVSSGGRQMPGHFSYKEKRIVTGSSPVTTQVPHAVGF 129 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A K ++ + V FG+G++NQG +E N A + L VI + ENNQYA+ + Sbjct: 130 ALAAKMKKQPFVSFVTFGEGSSNQGDFHEGCNFAGVHKLPVILMCENNQYAISIPEHKQV 189 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDI----RAVKATMDKAV-AYCRAHKGPIIIEMLTYRYR 285 A R + + G +VDG D+ R VK ++AV Y GP +IE YR Sbjct: 190 A-GRVVDRAIGYGFHGERVDGNDVLDVYRVVKEARERAVNGY-----GPTLIEAYMYRLS 243 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HS +D YRT+EE+ R DPI + +K L+ E + + ++K + + Sbjct: 244 PHSTADDDMLYRTKEEVQANREK-DPIPRFKKYLVDCGLWDEEKEQMLADQLKKELQKAT 302 Query: 345 EFAQSDKEPDPAE 357 +A++ P P + Sbjct: 303 AYAEAAPFPQPED 315 >gi|30264044|ref|NP_846421.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. Ames] gi|42783068|ref|NP_980315.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus ATCC 10987] gi|47529480|ref|YP_020829.1| pyruvate dehydrogenase complex E1 component subunit alpha [Bacillus anthracis str. 'Ames Ancestor'] gi|47565848|ref|ZP_00236887.1| pyrubate dehydrogenase E1 comp [Bacillus cereus G9241] gi|49186881|ref|YP_030133.1| pyruvate dehydrogenase complex E1 component subunit alpha [Bacillus anthracis str. Sterne] gi|49478479|ref|YP_038034.1| pyruvate dehydrogenase complex E1 component subunit alpha [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141518|ref|YP_085312.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus E33L] gi|163941712|ref|YP_001646596.1| pyruvate dehydrogenase (acetyl-transferring) [Bacillus weihenstephanensis KBAB4] gi|165872874|ref|ZP_02217499.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. A0488] gi|167633626|ref|ZP_02391950.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. A0442] gi|167639487|ref|ZP_02397758.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. A0193] gi|170687267|ref|ZP_02878485.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. A0465] gi|170705715|ref|ZP_02896178.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. A0389] gi|177655195|ref|ZP_02936804.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. A0174] gi|190565844|ref|ZP_03018763.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis Tsiankovskii-I] gi|196035792|ref|ZP_03103194.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus W] gi|196038705|ref|ZP_03106013.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus NVH0597-99] gi|196045879|ref|ZP_03113108.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus 03BB108] gi|206978059|ref|ZP_03238943.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus H3081.97] gi|217961458|ref|YP_002340026.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus AH187] gi|218905103|ref|YP_002452937.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus AH820] gi|222097421|ref|YP_002531478.1| pyruvate dehydrogenase complex e1 component, alpha subunit [Bacillus cereus Q1] gi|225865954|ref|YP_002751332.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus 03BB102] gi|227816746|ref|YP_002816755.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. CDC 684] gi|229174641|ref|ZP_04302169.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus MM3] gi|229603348|ref|YP_002868272.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. A0248] gi|254683739|ref|ZP_05147599.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. CNEVA-9066] gi|254721574|ref|ZP_05183363.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. A1055] gi|254736084|ref|ZP_05193790.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. Western North America USA6153] gi|254743975|ref|ZP_05201658.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. Kruger B] gi|254754246|ref|ZP_05206281.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. Vollum] gi|254758063|ref|ZP_05210090.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. Australia 94] gi|301055463|ref|YP_003793674.1| pyruvate dehydrogenase complex E1 component subunit alpha [Bacillus anthracis CI] gi|122064634|sp|Q4MTG0|ODPA_BACCE RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|30258689|gb|AAP27907.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. Ames] gi|42738996|gb|AAS42923.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus ATCC 10987] gi|47504628|gb|AAT33304.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|47557128|gb|EAL15457.1| pyrubate dehydrogenase E1 comp [Bacillus cereus G9241] gi|49180808|gb|AAT56184.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. Sterne] gi|49330035|gb|AAT60681.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974987|gb|AAU16537.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus E33L] gi|163863909|gb|ABY44968.1| Pyruvate dehydrogenase (acetyl-transferring) [Bacillus weihenstephanensis KBAB4] gi|164711361|gb|EDR16913.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. A0488] gi|167512546|gb|EDR87921.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. A0193] gi|167531032|gb|EDR93719.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. A0442] gi|170129255|gb|EDS98119.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. A0389] gi|170668884|gb|EDT19629.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. A0465] gi|172080245|gb|EDT65336.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. A0174] gi|190562763|gb|EDV16729.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis Tsiankovskii-I] gi|195991441|gb|EDX55407.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus W] gi|196023319|gb|EDX61997.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus 03BB108] gi|196030428|gb|EDX69027.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus NVH0597-99] gi|206743686|gb|EDZ55109.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus H3081.97] gi|217063854|gb|ACJ78104.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus AH187] gi|218539871|gb|ACK92269.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus AH820] gi|221241479|gb|ACM14189.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus Q1] gi|225786207|gb|ACO26424.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus 03BB102] gi|227005295|gb|ACP15038.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. CDC 684] gi|228608843|gb|EEK66137.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus MM3] gi|229267756|gb|ACQ49393.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus anthracis str. A0248] gi|300377632|gb|ADK06536.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus biovar anthracis str. CI] gi|324327873|gb|ADY23133.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus thuringiensis serovar finitimus YBT-020] Length = 371 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 98/318 (30%), Positives = 153/318 (48%), Gaps = 27/318 (8%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + +Q R M+ R ++++ L G +G F GQEA + +L D Sbjct: 41 MPELSDDQLKELMRRMVYTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHFALEAED 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + S+G M N I+GAQ Sbjct: 100 FILPGYRDVPQLVWHGLPLYQAFL--------FSRGHFMGNQMPENVNAL-APQIIIGAQ 150 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K R + + GDG A+QG YE N A + I+V++NN+YA+ Sbjct: 151 IIQTAGVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAIS 210 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH----KGPIIIEM 279 T V + SA +++ V+ I G+QVDGMD AV A A A+ R +GP +IE Sbjct: 211 TPVEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYA----ATAFARERAVNGEGPTLIET 266 Query: 280 LTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMN 335 LT+RY H+M+ DP YRT++ NE DPI + R L NK W+ E + K IE Sbjct: 267 LTFRYGPHTMAGDDPTRYRTKDIENEW-EQKDPIVRFRA-FLENKGLWSQEVEEKVIE-E 323 Query: 336 VRKIINNSVEFAQSDKEP 353 ++ I ++ A++D+ P Sbjct: 324 AKEDIKQAI--AKADQAP 339 >gi|307108426|gb|EFN56666.1| hypothetical protein CHLNCDRAFT_22004 [Chlorella variabilis] Length = 396 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 2/277 (0%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EA +G +LT D + + YRE G IL G + + G +G+ +H Sbjct: 88 GEEATAIGSAAALTNDDVVFSQYREQGVILYRGFSVQDMAHQCFGNMHEQGRGRQMPIHY 147 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 S F+ + Q+ G A+A + + V FG+GAA++G + + N AA Sbjct: 148 GSKALNFHTISSTLATQLPHAVGAAYALRLDKKQACSVAYFGEGAASEGDFHAAMNFAAT 207 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 V+++ NN +A+ T + + RG + + ++VDG D RAV +A Sbjct: 208 LGAPVVFICRNNGWAISTPATDQYRGDGIAGRGPGYGMAALRVDGGDARAVFNATAEARR 267 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 P+++E ++YR HS SD ++ YR EE+ + R+ DP+ + ++ L+ W Sbjct: 268 IAIEEHVPVLVEAMSYRSGHHSTSDDSSRYRAAEEMRQWRAR-DPVTRFQRWLIDQGWWD 326 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + R+ + ++E AQ +P + ++SD+ Sbjct: 327 DAQDTAARQEARREVIQALETAQKAPKPPLSAMFSDV 363 >gi|307300279|ref|ZP_07580059.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Sinorhizobium meliloti BL225C] gi|306904445|gb|EFN35029.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Sinorhizobium meliloti BL225C] Length = 410 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 83/284 (29%), Positives = 138/284 (48%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E+ L+ R M+L+R F+ + G F +G+EAV + +L +GD Sbjct: 72 LSDEELLTGLRHMMLLRAFDARMLMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A ++M ++ + G+ + S ++GF+ G + Q Sbjct: 131 PTYRQAGLLIADDYPMVEMMNQIFSNELDPCHGRQLPVMYTSKEHGFFTISGNLATQYVQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ + +I GDG+ + + + A+ + VI I NNQ+A+ T Sbjct: 191 AVGWAMASAIKNDTRIAAGWIGDGSTAESDFHSALVFASTYKAPVILNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG+ F IP ++VDG D AV A A R + GP +IE +TYR Sbjct: 251 GIARGGSGT-FAARGLGFGIPALRVDGNDYLAVYAVARWAAERARLNLGPTLIEYVTYRV 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASE 326 HS S DP+ YR + E +E DP+ +++K L L W+ E Sbjct: 310 GAHSTSDDPSAYRPKTE-SEAWPLGDPVLRLKKHLILRGAWSEE 352 >gi|65321365|ref|ZP_00394324.1| COG1071: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Bacillus anthracis str. A2012] gi|118479184|ref|YP_896335.1| pyruvate dehydrogenase complex E1 component, subunit alpha [Bacillus thuringiensis str. Al Hakam] gi|228916609|ref|ZP_04080175.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929019|ref|ZP_04092051.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228947691|ref|ZP_04109981.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228987115|ref|ZP_04147240.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229013178|ref|ZP_04170322.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus mycoides DSM 2048] gi|229019175|ref|ZP_04176008.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus AH1273] gi|229025420|ref|ZP_04181835.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus AH1272] gi|229031605|ref|ZP_04187604.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus AH1271] gi|229061639|ref|ZP_04198978.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus AH603] gi|229093021|ref|ZP_04224152.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus Rock3-42] gi|229123493|ref|ZP_04252692.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus 95/8201] gi|229134782|ref|ZP_04263590.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus BDRD-ST196] gi|229140701|ref|ZP_04269249.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus BDRD-ST26] gi|229162906|ref|ZP_04290863.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus R309803] gi|229168713|ref|ZP_04296434.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus AH621] gi|229186212|ref|ZP_04313381.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus BGSC 6E1] gi|118418409|gb|ABK86828.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus thuringiensis str. Al Hakam] gi|228597388|gb|EEK55039.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus BGSC 6E1] gi|228614725|gb|EEK71829.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus AH621] gi|228620788|gb|EEK77657.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus R309803] gi|228642773|gb|EEK99056.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus BDRD-ST26] gi|228648635|gb|EEL04662.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus BDRD-ST196] gi|228659980|gb|EEL15621.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus 95/8201] gi|228690392|gb|EEL44178.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus Rock3-42] gi|228717646|gb|EEL69302.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus AH603] gi|228729699|gb|EEL80680.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus AH1271] gi|228735875|gb|EEL86455.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus AH1272] gi|228742115|gb|EEL92282.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus AH1273] gi|228748128|gb|EEL97989.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus mycoides DSM 2048] gi|228772709|gb|EEM21150.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228812211|gb|EEM58542.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228830826|gb|EEM76431.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843188|gb|EEM88270.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 374 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 98/318 (30%), Positives = 153/318 (48%), Gaps = 27/318 (8%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + +Q R M+ R ++++ L G +G F GQEA + +L D Sbjct: 44 MPELSDDQLKELMRRMVYTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHFALEAED 102 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + S+G M N I+GAQ Sbjct: 103 FILPGYRDVPQLVWHGLPLYQAFL--------FSRGHFMGNQMPENVNAL-APQIIIGAQ 153 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K R + + GDG A+QG YE N A + I+V++NN+YA+ Sbjct: 154 IIQTAGVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAIS 213 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH----KGPIIIEM 279 T V + SA +++ V+ I G+QVDGMD AV A A A+ R +GP +IE Sbjct: 214 TPVEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYA----ATAFARERAVNGEGPTLIET 269 Query: 280 LTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMN 335 LT+RY H+M+ DP YRT++ NE DPI + R L NK W+ E + K IE Sbjct: 270 LTFRYGPHTMAGDDPTRYRTKDIENEW-EQKDPIVRFRA-FLENKGLWSQEVEEKVIE-E 326 Query: 336 VRKIINNSVEFAQSDKEP 353 ++ I ++ A++D+ P Sbjct: 327 AKEDIKQAI--AKADQAP 342 >gi|322382752|ref|ZP_08056596.1| branched-chain alpha-keto acid dehydrogenase E1 subunit-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153221|gb|EFX45667.1| branched-chain alpha-keto acid dehydrogenase E1 subunit-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 311 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 92/310 (29%), Positives = 144/310 (46%), Gaps = 16/310 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 Y+ M+ R+++E++ L G + F IGQEA VG +L G D + YR++ Sbjct: 2 YKKMVSARKYDERSVLLQRAGKIP-FHVSGIGQEAAQVGAAFALDLGQDYFLPYYRDYAF 60 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG-FYGGHGIVGAQVSLGTGIAFA 173 +L+ G+ +M + +S G FS K G V QV G A A Sbjct: 61 VLSVGITLKDLMLSAFAKAEDVSSGGRQMPGHFSYKEKRIVTGSSPVTTQVPHAVGFALA 120 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K ++ + V FG+G++NQG +E N A + L VI + ENNQYA+ + A Sbjct: 121 AKMKKQPFVSFVTFGEGSSNQGDFHEGCNFAGVHKLPVILMCENNQYAISIPEHKQVA-G 179 Query: 234 NFSKRGVSFNIPGMQVDGMDI----RAVKATMDKAV-AYCRAHKGPIIIEMLTYRYRGHS 288 R + + G +VDG D+ R VK ++AV Y GP +IE YR HS Sbjct: 180 RVVDRAIGYGFHGERVDGNDVLDVYRVVKEARERAVNGY-----GPTLIEAYMYRLSPHS 234 Query: 289 MSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 +D YRT+EE+ R DPI + +K L+ E + + ++K + + +A Sbjct: 235 TADDDMLYRTKEEVQANREK-DPIPRFKKYLVDCGLWDEEKEQMLADQLKKELQKATAYA 293 Query: 348 QSDKEPDPAE 357 ++ P P + Sbjct: 294 EAAPFPQPED 303 >gi|49259445|pdb|1V11|A Chain A, Crosstalk Between Cofactor Binding And The Phosphorylation Loop Conformation In The Bckd Machine Length = 400 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 87/321 (27%), Positives = 141/321 (43%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 106 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 107 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 167 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 227 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 S SD ++ YR+ +E+N PI ++R LL W E K R+ + Sbjct: 287 AIGHASTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 346 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 347 EAFEQAERKPKPNPNLLFSDV 367 >gi|134100487|ref|YP_001106148.1| pyruvate dehydrogenase E1 component alpha subunit [Saccharopolyspora erythraea NRRL 2338] gi|291005035|ref|ZP_06563008.1| pyruvate dehydrogenase E1 component alpha subunit [Saccharopolyspora erythraea NRRL 2338] gi|133913110|emb|CAM03223.1| pyruvate dehydrogenase E1 component alpha subunit [Saccharopolyspora erythraea NRRL 2338] Length = 361 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 93/318 (29%), Positives = 154/318 (48%), Gaps = 26/318 (8%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L +R M++ RRF+ +A L G + + GQEA VG ++L E D + YR+ Sbjct: 38 LELHRRMVVGRRFDTQATALTKQGRLAVYPS-SRGQEACQVGAVLALEERDWLFPTYRDS 96 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS-LGT--- 168 +++ GVD + + L G S H+ G+ VG Q + L T Sbjct: 97 VALVSRGVDPVQTLTLLQG-----------SWHL-----GYDPYEHRVGPQCTPLATNTL 140 Query: 169 ---GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G+A A + + D + +V GDGA ++G +E+ N A +W V+++++NN YA+ Sbjct: 141 HAVGMAHAARLKGEDSVSLVLLGDGATSEGDTHEALNFAGVWQAPVVFLVQNNGYAISVP 200 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +S+ +A + + +G+ + + +DG D AV T+ +AVA RA GP +IE LTYR Sbjct: 201 MSKQNAAPSLAHKGIGYGVASELIDGNDPAAVYTTVREAVAAARAGAGPALIEALTYRVE 260 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 H+ +D AN YR E+ DP++++ + L E + + Sbjct: 261 AHTNADDANRYRDAGEVAAWLGK-DPVDRLERHLTSRGLLDEARRAAVAEEAEAFAASVR 319 Query: 345 EFAQSDKEPDPAELYSDI 362 D EPDPAEL++ + Sbjct: 320 NRMNVDVEPDPAELFTHV 337 >gi|319892500|ref|YP_004149375.1| Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Staphylococcus pseudintermedius HKU10-03] gi|317162196|gb|ADV05739.1| Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Staphylococcus pseudintermedius HKU10-03] gi|323464398|gb|ADX76551.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus pseudintermedius ED99] Length = 332 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 89/305 (29%), Positives = 135/305 (44%), Gaps = 3/305 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M L R+ +E+ L G + F C GQEA +G +L +GD YR+ + Sbjct: 18 YRAMDLGRKLDERMWLLNRAGKIP-FVISCQGQEATQIGTAYALQKGDITSPYYRDLALV 76 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFAN 174 G+ + M G++ IS G FS K G V Q+ G A Sbjct: 77 TYLGMTPLETMLSAFGKRDDISSGGKQMPSHFSKKEVGIMSQGSSVATQILHAVGAALTF 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K +I + G+G++NQG +E N A + NL I +IENN+YA+ S Sbjct: 137 KMDGKSQIALTTLGEGSSNQGDFHEGLNFAGVHNLPFICLIENNKYAISVSKEFQYGAKY 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + G +DG D AV + KA +G +IE + R HS D Sbjct: 197 LSDRAKGYGMFGETIDGNDPIAVYGAIKKARERAVNGEGASLIEAMCTRLTAHSSDDDDR 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT EE N + N D + ++ L+ E + IE ++ ++ + + A++ PD Sbjct: 257 YRTVEEKNADKEN-DCNLKFKQYLIDQSLVDETWFESIEKENQQWVHQATKEAEAAPYPD 315 Query: 355 PAELY 359 P+E Y Sbjct: 316 PSETY 320 >gi|299473224|emb|CBN78800.1| similar to 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor [Ectocarpus siliculosus] Length = 446 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 1/277 (0%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EA+ +G +L D T YRE G ++ + + KG+ +H Sbjct: 139 GEEALQMGGAAALDMNDMAFTQYREPGLLMWRDFGVQSFADQCLSNISDLGKGRQMPVHY 198 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 S + + +G Q+ G +A K D I V FGDGAA++G + + +AA Sbjct: 199 GSKELHYQTVSSPLGTQIPQAVGAGYALKLSGKDNIAVCYFGDGAASEGDFHAALALAAT 258 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 ++ V++V NN YA+ TSV+ R + + ++VDG D A+ A +A Sbjct: 259 RDVPVLFVCRNNGYAISTSVADQYRGDGIVSRAPGYGMHAVRVDGNDALAMFAATAEARR 318 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 C + K P+++E +TYR HS SD + YR+ E+ + ++NH PI + L W Sbjct: 319 VCLSQKKPVLMEAMTYRLGHHSTSDDWSRYRSSNEVKQWKANHHPIRRFYSYLEGKGWWD 378 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + + R+ + ++E A+ +P ++ D+ Sbjct: 379 SAKDRVLRDRERRSVLIALETAERKAKPSLGSMFEDV 415 >gi|260469853|ref|ZP_05814002.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Mesorhizobium opportunistum WSM2075] gi|259028377|gb|EEW29704.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Mesorhizobium opportunistum WSM2075] Length = 410 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/284 (28%), Positives = 134/284 (47%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ L R M+ +R F+ + G F +G+EAV + +L+ GD Sbjct: 72 LTDEELLEGLRHMMTLRTFDARMQMAQRQGKTS-FYMQHLGEEAVSCAFRKALSPGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A G +M ++ + KG+ + S ++GF+ G + Q Sbjct: 131 PTYRQAGLLIADGYPMVTMMNQIYSNEADPLKGRQLPIMYSSKEHGFFSISGNLATQYIQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ + NNQ+A+ T Sbjct: 191 AVGWAMASAISNDSKIAAAWIGDGSTAESDFHSALVFASTYKAPVVLNVVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG+ F IP ++VDG D AV A A R + GP ++E +TYR Sbjct: 251 GIARGGSGT-FAARGLGFGIPSLRVDGNDYLAVHAVAKWAAERARGNLGPTLVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLH-NKWASE 326 HS S DP+ YR + E ++ DPI +++ L+ W+ E Sbjct: 310 GAHSSSDDPSAYRPKTE-SDAWPLGDPIMRLKNHLIRLGVWSDE 352 >gi|228992710|ref|ZP_04152636.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus pseudomycoides DSM 12442] gi|229006270|ref|ZP_04163954.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus mycoides Rock1-4] gi|228754916|gb|EEM04277.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus mycoides Rock1-4] gi|228767042|gb|EEM15679.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus pseudomycoides DSM 12442] Length = 371 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 98/318 (30%), Positives = 152/318 (47%), Gaps = 27/318 (8%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E +Q R M+ R ++++ L G +G F GQEA + +L D Sbjct: 41 MPELTDDQLKELMRRMVYTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHFALEAED 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + S+G M N I+GAQ Sbjct: 100 FILPGYRDVPQLVWHGLPLYQAFL--------FSRGHFMGNQMPENVNAL-APQIIIGAQ 150 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K R + + GDG A+QG YE N A + I+V++NN+YA+ Sbjct: 151 IIQTAGVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAIS 210 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH----KGPIIIEM 279 T V + SA +++ V+ I G+QVDGMD AV A A A+ R +GP +IE Sbjct: 211 TPVEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYA----ATAFARERAVNGEGPTLIET 266 Query: 280 LTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMN 335 LT+RY H+M+ DP YRT++ NE DPI + R L NK W+ E + K IE Sbjct: 267 LTFRYGPHTMAGDDPTRYRTKDIENEW-EQKDPIVRFRA-FLENKGLWSQEVEEKVIE-E 323 Query: 336 VRKIINNSVEFAQSDKEP 353 ++ I ++ A++D+ P Sbjct: 324 AKEDIKQAI--AKADQAP 339 >gi|90108855|pdb|2BFC|A Chain A, Reactivity Modulation Of Human Branched-Chain Alpha- Ketoacid Dehydrogenase By An Internal Molecular Switch Length = 400 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 86/321 (26%), Positives = 142/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 106 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + +RE G ++ MA+ G + KG+ +H + F + Sbjct: 107 DLVFGQFREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 167 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 227 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R S SD ++ +R+ +E+N PI ++R LL W E K R+ + Sbjct: 287 RIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 346 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 347 EAFEQAERKPKPNPNLLFSDV 367 >gi|322368459|ref|ZP_08043028.1| putative branched-chain amino acid dehydrogenase E1 component alpha subunit [Haladaptatus paucihalophilus DX253] gi|320552475|gb|EFW94120.1| putative branched-chain amino acid dehydrogenase E1 component alpha subunit [Haladaptatus paucihalophilus DX253] Length = 348 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 81/276 (29%), Positives = 133/276 (48%), Gaps = 15/276 (5%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + F+ E + M+L RRF+E+A L G + + GQEA VG +++ + D Sbjct: 13 TPFSAEAARETFERMVLARRFDERAIALQRRGWMSSWPPYR-GQEASQVGAALAMADDDW 71 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR +G +A GV S I+ GR + S H T + + Q+ Sbjct: 72 LFPTYRSNGMQVARGVPISDILLFRRGRP------EFNSEHDIPT----FPQAVPIATQI 121 Query: 165 SLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A YR D+ V+C FGDGA ++G +E N A +++ V++ ENN +A+ Sbjct: 122 PHAAGAGMAMNYR-GDEDAVLCYFGDGATSEGDFHEGLNFAGVFDAPVVFFCENNNWAIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + +A + + + ++ G+QVDG D AV+ T+ A+ R K P+++E LTYR Sbjct: 181 LPRHKQTASDSIAVKAEAYGFEGVQVDGNDPLAVRETVADALDSARKGK-PVLVESLTYR 239 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ S DP+ Y E+ DP+++ L Sbjct: 240 QGAHTTSDDPSKYEDVEQDLPEWRKADPLDRYETWL 275 >gi|256059277|ref|ZP_05449479.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella neotomae 5K33] gi|261323229|ref|ZP_05962426.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella neotomae 5K33] gi|261299209|gb|EEY02706.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella neotomae 5K33] Length = 410 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 152/325 (46%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 72 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG + S ++GF+ G + Q + Sbjct: 131 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGGQLPVMYSSKEHGFFTISGNLATQYTQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 251 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ YR + E N+ DPI +++ L+ SE K+ E V I+ ++ Sbjct: 310 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQAEAEVMDIVVSA 368 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 369 QREAEAIGTLHDGRKPSMRDMFEDV 393 >gi|170089263|ref|XP_001875854.1| predicted protein [Laccaria bicolor S238N-H82] gi|164649114|gb|EDR13356.1| predicted protein [Laccaria bicolor S238N-H82] Length = 485 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/281 (26%), Positives = 140/281 (49%), Gaps = 5/281 (1%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTG-RQGGISKGKGGSMH 145 G+EA I+G +L D+++ YRE G +L G +MA+ G + G KG+ +H Sbjct: 159 GEEATIIGSAAALEMDDEILGQYREMGVLLWRGFAIDDVMAQCFGNEEDGSGKGRQMPVH 218 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKY---RRSDKICVVCFGDGAANQGQVYESFN 202 S K+ F+ + Q+ G+ +A K RRS I FG+GAA++G + Sbjct: 219 FGSPKHHFHTISSPLATQIPQAAGVGYALKRTPDRRSRSIAACYFGEGAASEGDFHAGLM 278 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A+ +++ NN +A+ T + + RG + I ++VDG D+ AV A + Sbjct: 279 LASTIPSPTLFIARNNGFAISTPSTEQYNGDGIASRGPGYGIDTVRVDGNDVLAVLAAIR 338 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHN 321 +A C +++E ++YR HS SD + YR R E+ + + +PI + R + Sbjct: 339 EARKRCLEQGRAVLVEAMSYRVSHHSTSDDSFAYRPRTEVEDRKKVDNPIMRFRLFMESQ 398 Query: 322 KWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 W + E++ +++ + + + A++ K + +EL++D+ Sbjct: 399 GWWNADAETELKARLKEDVMKAFKRAETLKRAELSELFTDV 439 >gi|256015303|ref|YP_003105312.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella microti CCM 4915] gi|255997963|gb|ACU49650.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella microti CCM 4915] Length = 410 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 88/325 (27%), Positives = 152/325 (46%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 72 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 131 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP +E +TYR Sbjct: 251 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTTVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ YR + E N+ DPI +++ L+ SE K+ E V I+ ++ Sbjct: 310 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQAEAEVMDIVVSA 368 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 369 QREAEAIGTLHDGRKPSMRDMFEDV 393 >gi|228998754|ref|ZP_04158340.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus mycoides Rock3-17] gi|229086537|ref|ZP_04218709.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus Rock3-44] gi|228696854|gb|EEL49667.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus Rock3-44] gi|228760929|gb|EEM09889.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus mycoides Rock3-17] Length = 374 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 98/318 (30%), Positives = 152/318 (47%), Gaps = 27/318 (8%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E +Q R M+ R ++++ L G +G F GQEA + +L D Sbjct: 44 MPELTDDQLKELMRRMVYTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHFALEAED 102 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + S+G M N I+GAQ Sbjct: 103 FILPGYRDVPQLVWHGLPLYQAFL--------FSRGHFMGNQMPENVNAL-APQIIIGAQ 153 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K R + + GDG A+QG YE N A + I+V++NN+YA+ Sbjct: 154 IIQTAGVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAIS 213 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH----KGPIIIEM 279 T V + SA +++ V+ I G+QVDGMD AV A A A+ R +GP +IE Sbjct: 214 TPVEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYA----ATAFARERAVNGEGPTLIET 269 Query: 280 LTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMN 335 LT+RY H+M+ DP YRT++ NE DPI + R L NK W+ E + K IE Sbjct: 270 LTFRYGPHTMAGDDPTRYRTKDIENEW-EQKDPIVRFRA-FLENKGLWSQEVEEKVIE-E 326 Query: 336 VRKIINNSVEFAQSDKEP 353 ++ I ++ A++D+ P Sbjct: 327 AKEDIKQAI--AKADQAP 342 >gi|146308267|ref|YP_001188732.1| pyruvate dehydrogenase (acetyl-transferring) [Pseudomonas mendocina ymp] gi|145576468|gb|ABP86000.1| Pyruvate dehydrogenase (acetyl-transferring) [Pseudomonas mendocina ymp] Length = 362 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 82/297 (27%), Positives = 136/297 (45%), Gaps = 18/297 (6%) Query: 27 ATSSVDCVDIP-FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLC 85 A C ++P + + F++ + YR MLL R F++KA L G +G + Sbjct: 14 APDGAPCAELPAWSDDFDLL-------IRLYRQMLLTRLFDQKAVALQRTGRIGTYAP-T 65 Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 IGQEA+ V + ++ D ++ YR+ + GV +I+ G + G + Sbjct: 66 IGQEAIGVAIGATMQADDVLVPYYRDTAVQVMRGVRMEEILLYWGGDERGSAYVDPAVAE 125 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 F + Q G+A A K R ++ V GDGA ++G E+ N+A Sbjct: 126 DFPLCVP-------IATQALHACGVASAFKIRGQHRVAVTTCGDGATSKGDFLEALNVAG 178 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 W L V++V+ NNQ+A+ +++ + G QVDG D+ AV M A+ Sbjct: 179 AWQLPVVFVVNNNQWAISVPRRIQCGAPTLAQKALGAGFAGEQVDGNDVLAVYDRMQVAL 238 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHN 321 R KGP +IE L+YR H+ +D A YR EE+ + +P+ +++ L+ Sbjct: 239 ERARQGKGPTLIECLSYRLGDHTTADDATRYRPAEEVKQA-WQEEPVARLQAFLVRQ 294 >gi|73947481|ref|XP_866392.1| PREDICTED: similar to branched chain keto acid dehydrogenase E1, alpha polypeptide isoform 2 [Canis familiaris] Length = 446 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 87/321 (27%), Positives = 140/321 (43%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 94 EDPHLPQEKVLKFYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 152 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G KG+ +H F + Sbjct: 153 DLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDPGKGRQMPVHYGCKDRHFVTISSPLAT 212 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 213 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 272 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 273 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 332 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R L W + K RK + Sbjct: 333 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLQSRGWWDDEQEKAWRKQSRKKVM 392 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 393 EAFEQAERKPKPNPNLLFSDV 413 >gi|296233895|ref|XP_002762220.1| PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial-like [Callithrix jacchus] Length = 449 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 91/324 (28%), Positives = 144/324 (44%), Gaps = 6/324 (1%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 95 EDPHLPKEKVLKFYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 153 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 154 DLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDLGKGRQMPVHYGCKERHFVTISSPLAT 213 Query: 163 QVSLG---TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 Q+ G G A+A K ++++ + FG+GAA++G + FN AA +I+ NN Sbjct: 214 QIPQGEEAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNG 273 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ T S + RG + I ++VDG D+ AV +A A P +IE Sbjct: 274 YAISTPTSEQYRGDGIA-RGPGYGILSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEA 332 Query: 280 LTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 +TYR HS SD ++ YR+ +E+N PI ++R LL W E K RK Sbjct: 333 MTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRK 392 Query: 339 IINNSVEFAQSDKEPDPAELYSDI 362 + + E A+ +P+P L+SD+ Sbjct: 393 KVMEAFEQAERKPKPNPNLLFSDV 416 >gi|229117465|ref|ZP_04246839.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus Rock1-3] gi|228665970|gb|EEL21438.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus Rock1-3] Length = 396 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 98/318 (30%), Positives = 153/318 (48%), Gaps = 27/318 (8%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + +Q R M+ R ++++ L G +G F GQEA + +L D Sbjct: 66 MPELSDDQLKELMRRMVYTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHFALEAED 124 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + S+G M N I+GAQ Sbjct: 125 FILPGYRDVPQLVWHGLPLYQAFL--------FSRGHFMGNQMPENVNAL-APQIIIGAQ 175 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K R + + GDG A+QG YE N A + I+V++NN+YA+ Sbjct: 176 IIQTAGVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAIS 235 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH----KGPIIIEM 279 T V + SA +++ V+ I G+QVDGMD AV A A A+ R +GP +IE Sbjct: 236 TPVEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYA----ATAFARERAVNGEGPTLIET 291 Query: 280 LTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMN 335 LT+RY H+M+ DP YRT++ NE DPI + RK L K W+ E + K IE Sbjct: 292 LTFRYGPHTMAGDDPTRYRTKDIENEW-EQKDPIVRFRK-FLETKGLWSQEVEEKVIE-E 348 Query: 336 VRKIINNSVEFAQSDKEP 353 ++ I ++ A++D+ P Sbjct: 349 AKEDIKQAI--AKADQAP 364 >gi|327348607|gb|EGE77464.1| 2-oxoisovalerate dehydrogenase alpha subunit [Ajellomyces dermatitidis ATCC 18188] Length = 460 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 85/328 (25%), Positives = 151/328 (46%), Gaps = 21/328 (6%) Query: 50 EQELSAYRLMLLIRRFE------EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 E+ +S Y+ ML + + ++ G+L F + G+E + VG +L D Sbjct: 91 EEVISWYKNMLTVSIMDVIMFDAQRQGRL-------SFYMVSAGEEGIAVGSAAALIPED 143 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YRE G G M++L + +G+ +H S+K Y + Q Sbjct: 144 VIFAQYRETGVFQQRGFTLKDFMSQLFANRNDSGRGRNMPVHYGSSKINTYTISSPLATQ 203 Query: 164 VSLGTGIAFANKYRR------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + G A+A K + ++ FG+GAA++G + + NIAA + V+++ N Sbjct: 204 IPQAAGAAYALKLQSLQNPNIPQRVVACYFGEGAASEGDFHAALNIAATRSCPVVFICRN 263 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PII 276 N YA+ T + RGV + I ++VDG DI AV +A + G P++ Sbjct: 264 NGYAISTPTLEQYRGDGIASRGVGYGIDTIRVDGNDIFAVHEVTKEARRMALENGGRPVL 323 Query: 277 IEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 IE ++YR HS SD + YR R E+ + + +PI ++RK + +E ++ Sbjct: 324 IEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPITRLRKWMEGEGIWNEDLERDTRDE 383 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDIL 363 +RK + A+ +K+P E+++D+ Sbjct: 384 LRKAVLREFSAAEKEKKPPLREMFNDVF 411 >gi|212639720|ref|YP_002316240.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component subunit alpha [Anoxybacillus flavithermus WK1] gi|212561200|gb|ACJ34255.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Anoxybacillus flavithermus WK1] Length = 371 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 88/305 (28%), Positives = 138/305 (45%), Gaps = 38/305 (12%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + EQ R M+ R +++ L G +G F GQEA + +L + D Sbjct: 41 MPDLTDEQLKELMRRMVYTRVLDQRCISLNRQGRLG-FYAPTAGQEASQLASHFALEKED 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + +FS + F+G G Sbjct: 100 FILPGYRDVPQMIWHGLPLYQAF-------------------LFS-RGHFHGNQIPEGVN 139 Query: 164 V-----------SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 V G+A K R + V GDG A+QG YE N A +N I Sbjct: 140 VLPPQIIIGAQIIQTAGVALGMKKRGKKAVAVTYTGDGGASQGDFYEGINFAGAFNAPAI 199 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 ++++NN++A+ T V + SA +++ V+ IPG+QVDGMD AV + A + Sbjct: 200 FIVQNNRFAISTPVEKQSAAKTIAQKAVAAGIPGIQVDGMDPLAVYVAVRDARERAINGE 259 Query: 273 GPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGD 328 GP +IE L +RY H+M+ DP YR++E NE DP+ + RK L NK W+ E + Sbjct: 260 GPTLIETLCFRYGPHTMAGDDPTRYRSKELENEW-EKKDPLVRFRK-FLENKGLWSEEEE 317 Query: 329 LKEIE 333 + IE Sbjct: 318 NRVIE 322 >gi|169236556|ref|YP_001689756.1| branched-chain amino acid dehydrogenase E1 component alpha subunit [Halobacterium salinarum R1] gi|167727622|emb|CAP14410.1| putative branched-chain amino acid dehydrogenase E1 component alpha subunit [Halobacterium salinarum R1] Length = 368 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 95/325 (29%), Positives = 146/325 (44%), Gaps = 16/325 (4%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L +VSE EQ + R M+ R F+E+A L G + G+ GQE VG + Sbjct: 30 LHAVDVSE---EQARAVLRDMVRARHFDERALALQRRGWMPGYPPFK-GQEGSQVGAAHA 85 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L D + YR + LA GV AS ++ GR H N F Sbjct: 86 LAGDDWLFPTYRSNAMQLARGVPASDLLLFRRGR---------AEFHSDHDHNVFPQAVP 136 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 I +Q+ G A Y S + + FGDGA ++G ++ N A +++ V++ ENN Sbjct: 137 I-ASQIPHAVGAGMAMSYTDSGQASLAYFGDGATSEGDFHQGMNFAGVFDAPVVFFCENN 195 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +A+ R +A + + + ++ G+QVDG D AV T+ A+A R PI++E Sbjct: 196 NWAISLPRERQTASDSIAAKADAYGFEGVQVDGNDPLAVYETVTDALAGAR-DGTPILVE 254 Query: 279 MLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 LTYR H+ S DP YR EE DP+++ L G ++E Sbjct: 255 SLTYRQGAHTTSDDPDRYRPEEEDLPAWRTADPVDRYADYLHDQGVIDAGFVEECFDAAA 314 Query: 338 KIINNSVEFAQSDKEPDPAELYSDI 362 I+++VE A++ P EL+ + Sbjct: 315 DEIDDAVETAEAAGAPAVDELFDHV 339 >gi|261205330|ref|XP_002627402.1| 2-oxoisovalerate dehydrogenase alpha subunit [Ajellomyces dermatitidis SLH14081] gi|239592461|gb|EEQ75042.1| 2-oxoisovalerate dehydrogenase alpha subunit [Ajellomyces dermatitidis SLH14081] gi|239611384|gb|EEQ88371.1| 2-oxoisovalerate dehydrogenase alpha subunit [Ajellomyces dermatitidis ER-3] Length = 448 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 85/328 (25%), Positives = 151/328 (46%), Gaps = 21/328 (6%) Query: 50 EQELSAYRLMLLIRRFE------EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 E+ +S Y+ ML + + ++ G+L F + G+E + VG +L D Sbjct: 91 EEVISWYKNMLTVSIMDVIMFDAQRQGRL-------SFYMVSAGEEGIAVGSAAALIPED 143 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YRE G G M++L + +G+ +H S+K Y + Q Sbjct: 144 VIFAQYRETGVFQQRGFTLKDFMSQLFANRNDSGRGRNMPVHYGSSKINTYTISSPLATQ 203 Query: 164 VSLGTGIAFANKYRR------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + G A+A K + ++ FG+GAA++G + + NIAA + V+++ N Sbjct: 204 IPQAAGAAYALKLQSLQNPNIPQRVVACYFGEGAASEGDFHAALNIAATRSCPVVFICRN 263 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PII 276 N YA+ T + RGV + I ++VDG DI AV +A + G P++ Sbjct: 264 NGYAISTPTLEQYRGDGIASRGVGYGIDTIRVDGNDIFAVHEVTKEARRMALENGGRPVL 323 Query: 277 IEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 IE ++YR HS SD + YR R E+ + + +PI ++RK + +E ++ Sbjct: 324 IEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPITRLRKWMEGEGIWNEDLERDTRDE 383 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDIL 363 +RK + A+ +K+P E+++D+ Sbjct: 384 LRKAVLREFSAAEKEKKPPLREMFNDVF 411 >gi|257069656|ref|YP_003155911.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Brachybacterium faecium DSM 4810] gi|256560474|gb|ACU86321.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Brachybacterium faecium DSM 4810] Length = 377 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/263 (29%), Positives = 128/263 (48%), Gaps = 3/263 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M++IR + +A L G +G + +GQEA +G + E D ++ YREHG Sbjct: 36 YRDMVMIRGADLEATNLQRQGQLGLWAS-ALGQEAAQIGAGHASREQDYLVPTYREHGVA 94 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 A G++ +++ G G H + G H VG + L Sbjct: 95 WARGIEPWRLLELFRGISHGGWDPNELRTHPYMIVLGSQAPHA-VGYAMGLQRDGVVGTG 153 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +D + FGDGA+++G+V ESF AA + V++ +NNQ+A+ ++ ++ Sbjct: 154 DLSTDAAVLALFGDGASSEGEVAESFTFAASFQAPVVFYTQNNQWAISVP-TQVQSRVPL 212 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 ++R + IP ++VDG D+ AV + A+ R +GP+ +E LTYR H+ SD A+ Sbjct: 213 AQRSRGWGIPSVRVDGNDVLAVLGAVRTALDSARDGRGPVFVEALTYRMAAHTTSDDASR 272 Query: 296 RTREEINEMRSNHDPIEQVRKRL 318 E + DPI ++R+ L Sbjct: 273 YRPAAEEEEWAAKDPILRLRRHL 295 >gi|27381442|ref|NP_772971.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bradyrhizobium japonicum USDA 110] gi|27354610|dbj|BAC51596.1| 2-oxoisovalerate dehydrogenase alpha subunit [Bradyrhizobium japonicum USDA 110] Length = 410 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/299 (26%), Positives = 142/299 (47%), Gaps = 6/299 (2%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V + + ++ ++ R M+ +R F+ + G F G+EAV +++L Sbjct: 66 GPWVPDLSLDELVAGLRHMMTLRTFDARMQMAQRQGKTS-FYMQHTGEEAVSCAFRIALG 124 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D YR+ G ++A +M ++ + KG+ + S ++GF+ G + Sbjct: 125 PDDMNFPTYRQAGLLIAHDYPLVDMMCQIYSNEHDPLKGRQLPVMYSSKRHGFFSISGNL 184 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q G A A+ +R ++I GDG+ + + + A+ + V+ + NNQ+ Sbjct: 185 ATQFVQAVGWAMASAIKRDNRIAAAWIGDGSTAESDFHAALVFASTYKAPVVLNVVNNQW 244 Query: 221 AMGT--SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 A+ T ++R + T F+ RG+ F IP ++VDG D A A A+ R + GP +IE Sbjct: 245 AISTFQGIARGGSGT-FAARGLGFGIPALRVDGNDYLATYAVAKWAIERARLNLGPTLIE 303 Query: 279 MLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +TYR HS S DP+ YR + E E DP+ ++++ L+ SE K+ E + Sbjct: 304 YVTYRAGAHSTSDDPSAYRPKHESEEWPLG-DPVIRLKQHLIAAGAWSEERHKQTEAEI 361 >gi|312221809|emb|CBY01749.1| similar to 2-oxoisovalerate dehydrogenase subunit alpha [Leptosphaeria maculans] Length = 464 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 8/281 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + +G +L+ D + YRE G L G M +L G G+ Sbjct: 129 FYMVSAGEEGIAIGTASALSPADVIFCQYRETGVYLQRGFTLPSFMNQLFANAGDTGLGR 188 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR-----SDKICVVCF-GDGAANQ 194 +H S + + + Q+ G A+A K + ++K VCF G+GAA++ Sbjct: 189 NMPIHYGSKELNIHTISSTLATQIPHAAGAAYALKMQNLQNPNAEKRVAVCFFGEGAASE 248 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + I++ NN YA+ T S + RG + I ++VDG DI Sbjct: 249 GDFHGALNIAATRQVPCIFICRNNGYAISTPTSDQYRGDGIASRGAGYGIATLRVDGNDI 308 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV+ +A G P++IEM+ YR HS SD + YR R E+ + + +P+ Sbjct: 309 FAVRRATKEARRLALEDGGRPVLIEMMAYRVGHHSTSDDSFAYRQRVEVEDWKRRDNPLT 368 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++RK L SE + + + RK + + E A+ ++P Sbjct: 369 RLRKWLESRNLWSEDEEQSLRAATRKEVLRAFEEAEKLQKP 409 >gi|289706650|ref|ZP_06502998.1| putative pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Micrococcus luteus SK58] gi|289556570|gb|EFD49913.1| putative pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Micrococcus luteus SK58] Length = 384 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 82/265 (30%), Positives = 127/265 (47%), Gaps = 15/265 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M ++RR + +A L G + + L +GQEA VG ++L D + +YRE+G Sbjct: 60 YRQMAVVRRLDVEATHLQRQGELALWPPL-LGQEAAQVGSAVALRPDDFVFPSYRENGVA 118 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFST-KNGFYGGHGIVGAQVSLGTGIAFAN 174 L GV A ++ +G + + + G I+GAQ G A Sbjct: 119 LLRGVPALDLL----------RVWRGSTFSSWDPNETGVATQQIIIGAQALHAVGYAMGV 168 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + ++D +V FGDGA +QG V E+ +A + V++ +NN +A+ V R + + Sbjct: 169 QRDQADVATIVYFGDGATSQGDVNEAMIFSASYQSPVVFFCQNNHWAISEPV-RLQTRRS 227 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 + R F IP M+VDG D+ AV A AV GP IE +TYR H+ + DP Sbjct: 228 IADRPWGFGIPSMRVDGNDVLAVLAATRAAVERAADGGGPTFIEAVTYRMGPHTTADDPT 287 Query: 294 NYRTREEINEMRSNHDPIEQVRKRL 318 YR E+ ++ DP+ +V L Sbjct: 288 RYRDDAELEAWKAR-DPLTRVEAHL 311 >gi|89902318|ref|YP_524789.1| 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) [Rhodoferax ferrireducens T118] gi|89347055|gb|ABD71258.1| branched-chain alpha-keto acid dehydrogenase E1 component [Rhodoferax ferrireducens T118] Length = 411 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 88/290 (30%), Positives = 136/290 (46%), Gaps = 15/290 (5%) Query: 57 RLMLLIRRFEEK---AGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 R M+L R F+ + A + M F C+G+EA+ ++L EGD YR+ G Sbjct: 82 RAMMLTRAFDARMLIAQRQKKMS----FYMQCLGEEAIATAHALALGEGDMCFPTYRQQG 137 Query: 114 HILAC-GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 +LA D ++ +L + KG+ + S K GF+ G + QV G A Sbjct: 138 LLLAREDNDLVSMICQLYSNERDPMKGRQLPVMYSSKKQGFFSISGNLATQVIQAVGWAM 197 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A+ + DK+ GDGA + + A ++ VI + NNQ+A+ T + A + Sbjct: 198 ASAIKGDDKVASAWIGDGATAEADFHTGLTFAHVYRAPVILNVVNNQWAISTFQAIAGGE 257 Query: 233 -TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS- 290 T F+ RGV I ++VDG D A A A+ R++ GP +IE +TYR HS S Sbjct: 258 GTTFAARGVGSGIASLRVDGNDFLAAYAASQWALERARSNFGPTLIEWVTYRAGPHSTSD 317 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLH-NKWAS---EGDLKEIEMNV 336 DP+ YR + DPI ++++ L+ W+ E KE+E V Sbjct: 318 DPSKYRPANDAARFPLG-DPIARLKQHLIKLGAWSDAEHEAAQKELEAQV 366 >gi|311112295|ref|YP_003983517.1| 3-methyl-2-oxobutanoate dehydrogenase [Rothia dentocariosa ATCC 17931] gi|310943789|gb|ADP40083.1| 3-methyl-2-oxobutanoate dehydrogenase [Rothia dentocariosa ATCC 17931] Length = 388 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 20/320 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + EQ AYRLM + RR +++ L G + + GQEA VG ++ D Sbjct: 33 VQDVDAEQLREAYRLMYITRRIDDEGTALQRQGQMALWV-PSRGQEAAQVGSALAFAPND 91 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA- 162 + +YREH A GVD +++ G K + H+++ H + A Sbjct: 92 YIFPSYREHAVAFARGVDFRELITVFRGSHTHGWDPKKHNFHVYTKVLAAQIPHAVGYAM 151 Query: 163 -------------QVSLGTGIAFANKYRRSDKICV-VCFGDGAANQGQVYESFNIAALWN 208 Q+ G G A N + K V V FGDG++ +G+ +E+ AA ++ Sbjct: 152 GLNFDADIAAETGQLQTGQGQA-TNPDTDTVKPAVGVYFGDGSSTEGEAHEAMAFAASYD 210 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 V++ ++NN++A+ ++ S R + G++VDG D+ A A+ Sbjct: 211 APVLFFVQNNRWAISVPFD-VQSRVPISTRAQGYGFEGLRVDGNDVLGTLAVTRYALDKI 269 Query: 269 RAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 R +GP++IE TYR H+ + DP YR EE+ + R N DP+ ++ K L N A + Sbjct: 270 RRGEGPVLIEAETYRLGPHTTADDPTKYRDDEELQQ-RLNADPLIRLEKYLRENGHADDA 328 Query: 328 DLKEIEMNVRKIINNSVEFA 347 +++ +++ N E A Sbjct: 329 FFEKLAEEAQELANGVREAA 348 >gi|328883652|emb|CCA56891.1| Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Streptomyces venezuelae ATCC 10712] Length = 386 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 81/320 (25%), Positives = 146/320 (45%), Gaps = 12/320 (3%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ + L Y ++ RR+ +A L G + + GQEA + ++L E D Sbjct: 53 VADADPALLLRLYAELIRGRRYNTQATALTKQGRLAVYPS-THGQEACEIAAALALEERD 111 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +YR+ +A G+D + + L G G H + + Q Sbjct: 112 WLFPSYRDTLAAVARGLDPVQALTLLRG-----DWHTGYDPHEYRIAPLCTP----LATQ 162 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A A + + D + + GDG ++G +E+ N AA+W V+++++NN +A+ Sbjct: 163 LPHAVGLAHAARLKGDDVVALAMVGDGGTSEGDFHEALNFAAVWQAPVVFLVQNNGFAIS 222 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 +++ +A + + + V + +PG VDG D AV + +AVA R GP ++E +TYR Sbjct: 223 VPLAKQTAAPSLAHKAVGYGMPGRLVDGNDAIAVHQVLTEAVARARRGGGPTLVEAVTYR 282 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ +D A YR E+ R+ HDPI + + L E + + Sbjct: 283 IDAHTNADDATRYRAAGEVETWRA-HDPILILERELTERGLLDEDGRRAAAEAAETMAAE 341 Query: 343 SVEFAQSDKEPDPAELYSDI 362 E +D DP +L+S + Sbjct: 342 LRERMNADPVLDPMDLFSHV 361 >gi|73947479|ref|XP_541602.2| PREDICTED: similar to branched chain keto acid dehydrogenase E1, alpha polypeptide isoform 1 [Canis familiaris] Length = 480 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 87/321 (27%), Positives = 140/321 (43%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 128 EDPHLPQEKVLKFYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 186 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G KG+ +H F + Sbjct: 187 DLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDPGKGRQMPVHYGCKDRHFVTISSPLAT 246 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 247 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 306 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 307 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 366 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R L W + K RK + Sbjct: 367 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLQSRGWWDDEQEKAWRKQSRKKVM 426 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 427 EAFEQAERKPKPNPNLLFSDV 447 >gi|300742367|ref|ZP_07072388.1| pyruvate dehydrogenase E1 component, alpha subunit [Rothia dentocariosa M567] gi|300381552|gb|EFJ78114.1| pyruvate dehydrogenase E1 component, alpha subunit [Rothia dentocariosa M567] Length = 399 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 87/320 (27%), Positives = 149/320 (46%), Gaps = 20/320 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + EQ AYRLM + RR +++ L G + + GQEA +G ++ D Sbjct: 44 VQDVDAEQLREAYRLMYITRRIDDEGTALQRQGQMALWA-PSRGQEAAQIGSALAFAPND 102 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA- 162 + +YREH A GVD +++ G Q K + H+++ H + A Sbjct: 103 YIFPSYREHAVAFARGVDFRELITIFRGSQTHGWDPKKHNFHVYTKVLAAQVTHAVGYAM 162 Query: 163 -------------QVSLGTGIAFANKYRRSDKICV-VCFGDGAANQGQVYESFNIAALWN 208 Q+ G G A N + K V V FGDG++ +G+V+E+ AA ++ Sbjct: 163 GLNFDADIAAETGQLQTGQGQA-TNPENDTVKPAVGVYFGDGSSTEGEVHEAMVFAASYD 221 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 V++ ++NN++A+ ++ S R + G++VDG D+ A A+ Sbjct: 222 APVLFFVQNNRWAISVPFD-VQSRVPISTRAQGYGFEGLRVDGNDVLGTLAATRYALDKI 280 Query: 269 RAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 R +GP++IE TYR H+ + DP YR EE+ + N DP+ ++ K L N A + Sbjct: 281 RRGEGPVLIEAETYRLGPHTTADDPTKYREDEELQQY-LNADPLIRLEKYLRENGHADDA 339 Query: 328 DLKEIEMNVRKIINNSVEFA 347 +++ +++ N E A Sbjct: 340 FFEKLADEAQELANGVREAA 359 >gi|257869891|ref|ZP_05649544.1| pyruvate dehydrogenase [Enterococcus gallinarum EG2] gi|257804055|gb|EEV32877.1| pyruvate dehydrogenase [Enterococcus gallinarum EG2] Length = 369 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 13/262 (4%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + + + D ++ YR+ ++ Sbjct: 54 MVWSRVLDQRSTALNRQGRLGFFAPTA-GQEASQLASHFAFEKEDVLLPGYRDVPQLIQH 112 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ + G G +++ I+GAQ G+A K R Sbjct: 113 GLPLKEAFLWSRGHVAG---------NLYPEDLQALPPQIIIGAQYVQAAGVALGLKKRN 163 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + GDG ++QG YE+ N A ++ N ++ I+NN +A+ T SA +++ Sbjct: 164 KKNVVFTYTGDGGSSQGDFYEAINFAGAYHANAVFYIQNNGFAISTPREVQSAAPTLAQK 223 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 + IPG+QVDGMD AV A + GP++IE LTYRY H++S DP YR Sbjct: 224 AAAAGIPGIQVDGMDPLAVYTVSKAAREWAANGNGPVLIETLTYRYGPHTLSGDDPTRYR 283 Query: 297 TREEINEMRSNHDPIEQVRKRL 318 +++ +E + DP+ + R L Sbjct: 284 SKDMDSEWQQK-DPLVRFRTYL 304 >gi|229918498|ref|YP_002887144.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Exiguobacterium sp. AT1b] gi|229469927|gb|ACQ71699.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Exiguobacterium sp. AT1b] Length = 361 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 90/313 (28%), Positives = 157/313 (50%), Gaps = 18/313 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + EQ R M+ R ++++A L G +G + + GQEA ++G + +L + D Sbjct: 32 MPDLTDEQLQELMRRMVYTRIWDQRAISLNRQGRLGFYAPVA-GQEATMIGTQYALDKED 90 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + G G +G ++ M I+GAQ Sbjct: 91 WILPGYRDIPQLVFHGLPLYQAFLFSRGHVAGNRIPEGVNVLM---------PQIIIGAQ 141 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K + + + GDG ++QG YE N A + I+V++NN++A+ Sbjct: 142 IIQTAGVAMGLKRNGNKNVAITYTGDGGSSQGDFYEGLNFAGAFKSPAIFVVQNNRFAIS 201 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTY 282 T V + +A +++ V+ I G+QVDGMD+ AV A + A A +G P +IE LTY Sbjct: 202 TPVEKQTAAKTIAQKAVAAGINGIQVDGMDVLAVLAATQQ--ARVDALEGTPTLIESLTY 259 Query: 283 RYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 RY H+++ DP YRT+E E + DP+ + R L + K +E E+ + + Sbjct: 260 RYGPHTLAGDDPTRYRTKELDTEYQE-KDPLVRFRLFLENKKLWNEDMENEVIEQAKADV 318 Query: 341 NNSVEFAQSDKEP 353 ++ +Q+DKEP Sbjct: 319 KEAI--SQADKEP 329 >gi|321473470|gb|EFX84437.1| hypothetical protein DAPPUDRAFT_301077 [Daphnia pulex] Length = 433 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/278 (26%), Positives = 133/278 (47%), Gaps = 3/278 (1%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+E +G +L D + YRE G ++ G + M + G KGK +H Sbjct: 123 GEEGTHIGSAAALDPKDLIFGQYREAGTLMWRGFTLDQFMNQCYGNVDDGGKGKQMPVHY 182 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAA 205 S + F +G Q+ G A+A K R + +CV+C FG+G +++G + + N +A Sbjct: 183 GSKELNFVTISSPLGTQMPQAVGAAYAYK-RSQNGLCVMCYFGEGTSSEGDAHAALNFSA 241 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + VI+ NN YA+ T + RG ++ + ++VDG D+ AV KA Sbjct: 242 TLDCPVIFFCRNNGYAISTPSKEQYRGDGIAGRGPAYGMLTIRVDGNDVFAVYNATLKAR 301 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 + P++IE +TYR HS SD + YR+ +E+ PI ++R +L W Sbjct: 302 QVAISEMRPVLIEAMTYRIGHHSTSDDSTAYRSVDEVRYWDERDHPISRLRNYMLSKGWW 361 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + KE + + ++ + + A+ +P+ E+++D+ Sbjct: 362 GDAQEKEWKEDCKRQVMTAFARAEKKLKPNWKEIFTDV 399 >gi|328906483|gb|EGG26258.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium sp. P08] Length = 411 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 82/274 (29%), Positives = 137/274 (50%), Gaps = 9/274 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + + + + A +M++ RR + +A L G +G + L +GQEA G ++L DQ+ Sbjct: 80 DLSDDDLVKALEMMVMTRRLDVEATALQRHGELGLWPPL-LGQEATQAGAWLALGGEDQV 138 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 YRE G A GV +A++ G G S ++ + G G + A V Sbjct: 139 FPTYREQGLAHAMGVS----LADILGAWDGTSHCGWDTVTTHFSAYPVMIGSGTLHA-VG 193 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 GI + + + GDGA ++G E++ AA N V++V NNQ+A+ + Sbjct: 194 YAMGIQRDVEAGGAPAAVLDFHGDGAMSEGDTNEAYVFAASMNAPVVFVCVNNQWAI-SE 252 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 ++ + ++ +R + F IP +QVDG D+ A+ A + A+ + R+ KGP+ +E T+R Sbjct: 253 PTKVQSPSSLFRRAIGFGIPAVQVDGNDVMAMTAVLRSALDHARSGKGPVFVEAWTFRMG 312 Query: 286 GHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ + DPA YRT EE DPI ++R L Sbjct: 313 AHTTTDDPARYRTAEE-ESTWGKTDPIIRLRIYL 345 >gi|146183541|ref|XP_001026420.2| Dehydrogenase E1 component family protein [Tetrahymena thermophila] gi|146143532|gb|EAS06175.2| Dehydrogenase E1 component family protein [Tetrahymena thermophila SB210] Length = 431 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 3/285 (1%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F G++A VG+ +L D + YRE G I+ G ++ + G + KG+ Sbjct: 113 FYMPSFGEQATTVGVGAALEFEDLVFPQYREQGTIIYRGYTVRDMLNQCIGNIHDLGKGR 172 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S F + QV +G + + R +K+ FG+GAA++G + + Sbjct: 173 QMPVHYGSKALNFVTVSSPLTTQVPQASGAGYGYRLRGENKVAATYFGEGAASEGDWHAA 232 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N AA + +++ NN+YA+ T V + + + + I +VDG D AV T Sbjct: 233 LNFAATLSCQTLFLCRNNKYAISTPVVDQYRGDGIAGKSIGYGIKTYRVDGNDALAVYHT 292 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLL 319 + +A Y +K P IE +TYR HS SD + YRT +EI+ +S ++PI ++ L Sbjct: 293 VKEARNYIVTNKAPAFIEFMTYRIGDHSTSDHSVMYRTEDEISSWKSTNNPITRLGLYLK 352 Query: 320 HN--KWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + + E KE+ ++K I +++ A K P L+ D+ Sbjct: 353 KSGRRVFDEAKDKEVRAAIKKDIIAALKEANEQKLPAWNTLFEDV 397 >gi|70726399|ref|YP_253313.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus haemolyticus JCSC1435] gi|68447123|dbj|BAE04707.1| branched-chain alpha-keto acid dehydrogenase E1 [Staphylococcus haemolyticus JCSC1435] Length = 333 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 88/305 (28%), Positives = 136/305 (44%), Gaps = 3/305 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M L R+ +E+ L G + F GQEA +GM ++ EGD YR+ + Sbjct: 18 YKWMDLGRKVDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYAMKEGDISSPYYRDLAFV 76 Query: 116 LACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ M G++ I S GK H + G V Q+ G A A Sbjct: 77 TFMGISPYDTMLASFGKKDDINSGGKQMPSHFSHREKGILSQSSPVATQIPHSVGAALAL 136 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + I G+G++NQG +E N A + L + VI NN+YA+ + A Sbjct: 137 KMDKKPNIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPNTLQYAAEK 196 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S R + + I G VDG D A+ M +A +G +IE +T+R HS D Sbjct: 197 LSDRALGYGIYGETVDGDDPIAMYKAMKEARERALNGEGATLIEAITHRMTPHSSDDDDT 256 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRT+EE +++ +D + + LL + ++ L IE ++IIN + + A+ P Sbjct: 257 YRTKEEREALKT-YDCNLKFKDYLLEKEIINQEWLDNIEQEHKEIINKATKDAEKAPYPS 315 Query: 355 PAELY 359 E Y Sbjct: 316 VEETY 320 >gi|149722315|ref|XP_001500344.1| PREDICTED: branched chain keto acid dehydrogenase E1, alpha polypeptide [Equus caballus] Length = 479 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 127 EDPNLPQEKVLKFYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 185 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 186 DLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDLGKGRQMPVHYGCKERHFVTISSPLAT 245 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 246 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 305 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 306 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 365 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E+N PI ++R L W + K+ RK + Sbjct: 366 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLQSRGWWDDEQEKDWRKQSRKKVM 425 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+ + L+SD+ Sbjct: 426 EAFEQAERKPKPNFSLLFSDV 446 >gi|150398024|ref|YP_001328491.1| 3-methyl-2-oxobutanoate dehydrogenase [Sinorhizobium medicae WSM419] gi|150029539|gb|ABR61656.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Sinorhizobium medicae WSM419] Length = 410 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 83/284 (29%), Positives = 137/284 (48%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E+ L+ R M+L+R F+ + G F +G+EAV + +L +GD Sbjct: 72 LSDEELLTGLRHMMLLRAFDARMLMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A ++M ++ + G+ + S +GF+ G + Q Sbjct: 131 PTYRQAGLLIADDYPMVEMMNQIFSNELDPCHGRQLPVMYTSKAHGFFTISGNLATQYVQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ + +I GDG+ + + + A+ + VI I NNQ+A+ T Sbjct: 191 AVGWAMASAIKNDTRIAAGWIGDGSTAESDFHSALVFASTYKAPVILNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG+ F IP ++VDG D AV A A R + GP +IE +TYR Sbjct: 251 GIARGGSGT-FAARGLGFGIPALRVDGNDYLAVYAVARWAAERARLNLGPTLIEYVTYRV 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASE 326 HS S DP+ YR + E +E DP+ +++K L L W+ E Sbjct: 310 GAHSTSDDPSAYRPKTE-SEAWPLGDPVLRLKKHLVLRGVWSEE 352 >gi|89099517|ref|ZP_01172392.1| PdhA [Bacillus sp. NRRL B-14911] gi|89085670|gb|EAR64796.1| PdhA [Bacillus sp. NRRL B-14911] Length = 371 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 90/287 (31%), Positives = 139/287 (48%), Gaps = 16/287 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + EQ R M+ R ++++ L G +G F GQEA + + +L + D Sbjct: 41 MPELSDEQLQELMRRMVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASQFALEKED 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + S+G M N I+GAQ Sbjct: 100 FILPGYRDVPQMIWHGLPLYQAFL--------FSRGHFHGNQMPEGVNTI-SPQIIIGAQ 150 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K R + + + GDG A+QG YE N A + I+V++NN++A+ Sbjct: 151 IIQAAGVALGMKKRGAGSVAITYTGDGGASQGDFYEGLNFAGAFKAPAIFVVQNNRFAIS 210 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T V + SA +++ V+ IPG+QVDGMD AV A + A +GP +IE +TYR Sbjct: 211 TPVEKQSAAKTVAQKAVAAGIPGVQVDGMDPLAVYAAVSDARKRAVNGEGPTLIETMTYR 270 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASE 326 Y H+M+ DP YRT + NE DP+ + RK L NK W E Sbjct: 271 YGPHTMAGDDPTRYRTTDLDNEW-EKKDPLVRFRK-FLENKGIWNEE 315 >gi|321259117|ref|XP_003194279.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Cryptococcus gattii WM276] gi|317460750|gb|ADV22492.1| Branched-chain alpha-keto acid dehydrogenase E1-alpha subunit, putative [Cryptococcus gattii WM276] Length = 520 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 92/315 (29%), Positives = 156/315 (49%), Gaps = 13/315 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M LI + Q G + F C G+EA IVG ++ D++ YRE + Sbjct: 155 YRTMTLIPIVDNVLYQSQRQGRIS-FYMQCAGEEAAIVGSAAAMLANDEIFGQYRESAAL 213 Query: 116 LACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 L G +MA+ G +KG+ +H S ++GF+ + Q+ G A+ Sbjct: 214 LHRGFKLDALMAQCFGNVDDKGTKGRMMPVHYSSPEHGFHTITSPLATQMPQAAGAAYML 273 Query: 175 KY---RRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 K R+ D CV+C FGDGAA++G + + + ++ I+ NN +A+ T + Sbjct: 274 KLDEDRQGD--CVICYFGDGAASEGDFHAALGMNSVLGGPCIWFCRNNGFAISTPIVDQY 331 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A + RG ++ + ++VDG D AV A + +A K +++E +TYR HS S Sbjct: 332 AGDGIASRGPAYGLDTIRVDGNDALAVHAAVCEARKRAVEGKKGVLVEAMTYRVGHHSTS 391 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D ++ YR EE+ E +PI ++R L+ KW SE + KE+ + + + F+++ Sbjct: 392 DDSSMYRPIEEVKEWSVVDNPIHRLRSYLVSRKWWSEEEEKELLKKNKAEVMKA--FSRA 449 Query: 350 DKEPDP--AELYSDI 362 +K P P E+++D+ Sbjct: 450 EKLPKPKLGEMFNDV 464 >gi|295673810|ref|XP_002797451.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial [Paracoccidioides brasiliensis Pb01] gi|226282823|gb|EEH38389.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial [Paracoccidioides brasiliensis Pb01] Length = 451 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/291 (27%), Positives = 136/291 (46%), Gaps = 8/291 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + VG +L+ D + YRE G G M++L + +G+ Sbjct: 124 FYMVSAGEEGIAVGSASALSPDDVVFVQYRETGVFQQRGFTLKDFMSQLFANRNDPGRGR 183 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQ 194 +H S K + + Q+ G A+A K + +I FG+GAA++ Sbjct: 184 NMPVHYGSQKFKTHTVSSPLATQIPQAAGAAYALKIQSLQNPNIPKRIVACYFGEGAASE 243 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + V+++ NN YA+ T + RGV + I ++VDG D Sbjct: 244 GDFHAALNIAATRSCPVVFICRNNGYAISTPTLEQYRGDGIASRGVGYGIDTIRVDGNDF 303 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV +A + G PI+IE ++YR HS SD + YR R E+ + + +PI Sbjct: 304 FAVHEATKEARRMALENGGRPILIEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIT 363 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++RK + + +E ++ VRK + A+ +K+P E+++D+ Sbjct: 364 RLRKWMENQGIWNEDLERDTRDEVRKAVLREFSAAEKEKKPPLREMFNDVF 414 >gi|158313434|ref|YP_001505942.1| pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EAN1pec] gi|158108839|gb|ABW11036.1| Pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EAN1pec] Length = 420 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/292 (26%), Positives = 138/292 (47%), Gaps = 14/292 (4%) Query: 37 PFLEGFEVSE---------FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIG 87 P L G E + + E + +R ++L RR+ ++A L G + + G Sbjct: 37 PLLPGPEPARVLGTPAARALDAELLRALHRRLVLGRRYNQQATTLARQGRIAVYP-ASTG 95 Query: 88 QEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMF 147 QEA + M L E D + YR+ +++ GV + ++A + G G + + Sbjct: 96 QEACQIAPAMVLRETDWLFPTYRDTLAVVSRGVRPADVLAMMRGHTHGGYDPREHRIAPL 155 Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 +T H + A + + R D + + GDGA ++G +E+ A + Sbjct: 156 ATPLATQACHAVGLAHAARLRAASDPGAPR--DVVALALVGDGATSEGDFHEALTFAGVL 213 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 N V+++++NN YA+ ++R SA + + V + + G VDG D AV + AV + Sbjct: 214 NAPVVFLVQNNGYAISVPLARQSAAPTLAHKAVGYGVIGRLVDGNDAPAVHTVLGAAVEH 273 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 RA +GP+++E +TYR H+ +D A YRT +E+ ++ DP+ + + L Sbjct: 274 ARAGRGPVLVEAVTYRMDAHTSADDATRYRTAQEVASWQAR-DPVTLLERHL 324 >gi|149191190|ref|ZP_01869447.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component, eukaryotic type, alpha subunit [Vibrio shilonii AK1] gi|148834939|gb|EDL51919.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component, eukaryotic type, alpha subunit [Vibrio shilonii AK1] Length = 363 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 19/317 (5%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 L YR M++ R ++ KA L G +G + HL G EA+ + + +LT D + YR+ Sbjct: 32 LQFYRDMVVARTYDAKAVALQRTGKLGTYPSHL--GAEAIGIAIGHALTSSDVFVPYYRD 89 Query: 112 HGHILACGVDASKIMAELTGRQGG----ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 + G+ K + G + G G + F + Q + Sbjct: 90 MPALWVRGIAIEKNLQYWGGDERGSDFEFDDGSPCTDPPFCVP---------IATQCTHA 140 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+A A K + + + +V GDGA ++G ES N A WN+ +I+V+ NNQ+A+ S Sbjct: 141 VGVASALKIKGNHDVALVTCGDGATSKGDFLESLNCAGAWNIPLIFVVNNNQWAISVPRS 200 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + V +PG+ VDG D+ A+ T+ +AV R KG +IE ++YR H Sbjct: 201 LQCGAEFLADKAVGAGLPGLTVDGNDVIAMYDTIVQAVDRARKGKGATLIEAISYRLSDH 260 Query: 288 SMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + +D A+ YR+ E+ + +++PI++++ L+ S+ + + + I+ +V Sbjct: 261 TTADDASRYRSDSELQQAW-DYEPIKRLKSYLIARSLWSDEQEQLLVQEAKTIVEEAVTR 319 Query: 347 AQSDKEPDPAELYSDIL 363 + P P E D L Sbjct: 320 YLA-TPPQPPESAFDYL 335 >gi|320095620|ref|ZP_08027281.1| hypothetical protein HMPREF9005_1893 [Actinomyces sp. oral taxon 178 str. F0338] gi|319977441|gb|EFW09123.1| hypothetical protein HMPREF9005_1893 [Actinomyces sp. oral taxon 178 str. F0338] Length = 817 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 107/406 (26%), Positives = 170/406 (41%), Gaps = 72/406 (17%) Query: 27 ATSSVDCVDIP-----FLEGFEVSEFNKEQELSAYRLMLLIRRFE------EKAGQLYGM 75 A V D+P F G EV+ ++ + M+++R FE +K G+ G+ Sbjct: 14 APGHVAFPDVPVNQYSFDLGTEVARHGEDGLVRMLHDMIVVRTFESMLDSIKKTGEWQGV 73 Query: 76 GMV-GGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA-CGV--------DASKI 125 G HL IGQE+ VG LT D + ++R HG ILA C D I Sbjct: 74 AYNHKGPAHLGIGQESAYVGQSAVLTPDDFIFGSHRSHGEILAKCYSAMHQMDEGDLEAI 133 Query: 126 M---------------------------------AELTGRQGGISKGKGGSMHMFSTKNG 152 M AE+ R+ G ++G GGSMH F G Sbjct: 134 MKGFLGGETLSYAERIDYKDTKDLTENFILFGALAEIFARKSGFNRGLGGSMHTFFLPFG 193 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA------AL 206 Y + IVG + G A + R I + GD A G V+E+ N A +L Sbjct: 194 SYPNNAIVGGSAPIANGAALFKRINRKPGIVISNVGDAALACGPVWEALNFASMDQFRSL 253 Query: 207 W------NLNVIYVIENNQYAM-GTSVSRASAQTNFSKRGVSFNIPGM---QVDGMDIRA 256 W N +++ NN Y M G + ++ G + N M +VDG++ A Sbjct: 254 WRAEDGGNPPILFNFFNNFYGMGGQTYGETMGYEVLARVGAALNPEAMHAERVDGINPLA 313 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRK 316 V + +GP++++ +TYR+ GHS SD ++YRT+EE+ E+ D I++ Sbjct: 314 VAEATARKKKILEEGRGPVLMDTITYRFSGHSPSDASSYRTKEEV-ELWEQVDCIKEYSD 372 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK-EPDPAELYSD 361 L+ N ++ + + ++ + ++ A D+ P A+ Y D Sbjct: 373 LLISNGLTTQSAIDDYTADLTGKLVKVLKLAIDDEATPRVADGYID 418 >gi|241896040|ref|ZP_04783336.1| pyruvate dehydrogenase (acetyl-transferring) [Weissella paramesenteroides ATCC 33313] gi|241870771|gb|EER74522.1| pyruvate dehydrogenase (acetyl-transferring) [Weissella paramesenteroides ATCC 33313] Length = 387 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 85/281 (30%), Positives = 138/281 (49%), Gaps = 17/281 (6%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 ++ SE E ++ + ML R+ + ++ +L G G F GQEA + + + Sbjct: 52 YKRSELTDEDLVAIMKKMLFSRQLDIRSTKLAKQGRFGFFAPTA-GQEASQMASAYAFGK 110 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG----FYGGH 157 D + YR+ I+ G K + L R G +KG + F+T++G + Sbjct: 111 EDWLFPGYRDIPEIVDKGWPVWKAI--LWSR--GHAKG-----NEFTTEDGEPVNSWMPQ 161 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 I+GAQ G+A K R+ D + GDG +QG YE N A+ + N ++ ++N Sbjct: 162 IIIGAQYVEAAGVALGLKKRKQDAVAYAYTGDGGTSQGDFYEGVNFASAYKANAVFFVQN 221 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N YA+ T + +A + + +G IP + VDGMD A+ +A A+ A GP++I Sbjct: 222 NGYAISTPRALQTAAPHLAAKGWGSGIPSLVVDGMDPLAMYLAAKEARAWAAAGNGPVLI 281 Query: 278 EMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRK 316 E LT R HS + DP YRT+E+I E +P+ ++RK Sbjct: 282 ETLTNRLEPHSTAGDDPLRYRTKEDIAEWWKK-EPLIRMRK 321 >gi|313836304|gb|EFS74018.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL037PA2] gi|314928768|gb|EFS92599.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL044PA1] gi|314971196|gb|EFT15294.1| pyruvate dehydrogenase E1 component, alpha subunit [Propionibacterium acnes HL037PA3] Length = 392 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 82/274 (29%), Positives = 137/274 (50%), Gaps = 9/274 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + + + + A +M++ RR + +A L G +G + L +GQEA G ++L DQ+ Sbjct: 61 DLSDDDLVKALEMMVMTRRLDVEATALQRHGELGLWPPL-LGQEATQAGAWLALGGEDQV 119 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 YRE G A GV +A++ G G S ++ + G G + A V Sbjct: 120 FPTYREQGLAHAMGVS----LADILGAWDGTSHCGWDTVTTHFSAYPVMIGSGTLHA-VG 174 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 GI + + + GDGA ++G E++ AA N V++V NNQ+A+ + Sbjct: 175 YAMGIQRDVEAGGAPAAVLDFHGDGAMSEGDTNEAYVFAASMNAPVVFVCVNNQWAI-SE 233 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 ++ + ++ +R + F IP +QVDG D+ A+ A + A+ + R+ KGP+ +E T+R Sbjct: 234 PTKVQSPSSLFRRAIGFGIPAVQVDGNDVMAMTAVLRSALDHARSGKGPVFVEAWTFRMG 293 Query: 286 GHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ + DPA YRT EE DPI ++R L Sbjct: 294 AHTTTDDPARYRTAEE-ESTWGKTDPIIRLRIYL 326 >gi|156389683|ref|XP_001635120.1| predicted protein [Nematostella vectensis] gi|156222210|gb|EDO43057.1| predicted protein [Nematostella vectensis] Length = 444 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 80/278 (28%), Positives = 131/278 (47%), Gaps = 3/278 (1%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EA G +L D ++ YRE G ++ G + M + Q KG+ +H Sbjct: 134 GEEATHFGSAAALEMEDLIMGQYREAGVLMWRGFTLADFMNQCYANQHDAGKGRQMPVHY 193 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAA 205 S + F + Q+ +G A+A K R+ CV+C FGDGAA++G + +FN AA Sbjct: 194 GSKELNFVTISSTLATQMPQASGAAYALK-RQGKGNCVMCYFGDGAASEGDAHSAFNFAA 252 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + VI+ NN YA+ T + RG S+ + ++VDG DI AV KA Sbjct: 253 TLDAPVIFFCRNNGYAISTPTREQYRGDGIACRGRSYGMLAIRVDGNDIFAVYNVTKKAR 312 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 P+++E +TYR HS SD ++ YR+ +E+N PI ++R + W Sbjct: 313 EIAVNENRPVLVEAMTYRIGHHSTSDDSSVYRSLKEVNYWDKEDHPISRLRYYMEDKGWW 372 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + ++ + R + + A+ +P EL+ D+ Sbjct: 373 DQDQEQQWKKEARLQVMQAFADAEKALKPPVKELFLDV 410 >gi|313608919|gb|EFR84677.1| 2-oxoisovalerate dehydrogenase subunit alpha [Listeria monocytogenes FSL F2-208] Length = 276 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 80/269 (29%), Positives = 129/269 (47%), Gaps = 5/269 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 +++ + Y ML+ RR +E+ L G + F GQE +G + + D Sbjct: 8 LTEDKLIKMYETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYA 66 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR+ +LA G+ A IM + + S G+ H +N V Q Sbjct: 67 LPYYRDLAVVLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKENRIVTQSSPVTTQF 126 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 GI A K + G+G++NQG +E N A++ L V++VI NNQYA+ Sbjct: 127 PHAAGIGLAAKMAGDEIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQYAISV 186 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S+ A S R + + IPG +VDG ++ V A +A R +GP +IE ++YR+ Sbjct: 187 PASKQYAAEKLSDRAIGYGIPGERVDGTNMGEVYAAFKRAADRARNGEGPTLIETVSYRF 246 Query: 285 RGH-SMSDPANYRTREEINEMRSNHDPIE 312 H S D ++YR+REE++E + DP++ Sbjct: 247 TPHSSDDDDSSYRSREEVDEAKGK-DPLK 274 >gi|226292010|gb|EEH47430.1| 2-oxoisovalerate dehydrogenase subunit alpha [Paracoccidioides brasiliensis Pb18] Length = 483 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/291 (27%), Positives = 136/291 (46%), Gaps = 8/291 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + VG +L+ D + YRE G G M++L + +G+ Sbjct: 156 FYMVSAGEEGIAVGSASALSPDDVVFVQYRETGVFQQRGFTLKDFMSQLFANRNDPGRGR 215 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQ 194 +H S K + + Q+ G A+A K + +I FG+GAA++ Sbjct: 216 NMPVHYGSQKFKTHTVSSPLATQIPQAAGAAYALKIQALQNPNIPKRIVACYFGEGAASE 275 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + V+++ NN YA+ T + RGV + I ++VDG D Sbjct: 276 GDFHAALNIAATRSCPVVFICRNNGYAISTPTLEQYRGDGIASRGVGYGIDTIRVDGNDF 335 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV +A + G PI+IE ++YR HS SD + YR R E+ + + +PI Sbjct: 336 FAVHEATKEARRMALENGGRPILIEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIT 395 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++RK + + +E ++ VRK + A+ +K+P E+++D+ Sbjct: 396 RLRKWMENQGIWNEDLERDTRDEVRKAVLREFSAAEKEKKPPLREMFNDVF 446 >gi|288920255|ref|ZP_06414569.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Frankia sp. EUN1f] gi|288348359|gb|EFC82622.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Frankia sp. EUN1f] Length = 420 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 5/264 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R ++L RRF ++A L G + + GQEA + M L E D + YR+ + Sbjct: 80 HRRLVLGRRFNQQATTLARQGSLAVYPS-STGQEACQIAAAMVLRETDWLFPTYRDTLAV 138 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A GV ++A + G + ST H + A + Sbjct: 139 MARGVAPMDVLALMRGHTHCGYDPRRYRTAPLSTPLATQACHAV--GLAHAARLRAAGDP 196 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 D + + GDG ++G +E+ A + N V+++++NN YA+ ++R SA Sbjct: 197 GGGHDVVALALIGDGGTSEGDFHEALTFAGVLNAPVVFLVQNNGYAISVPLTRQSAAPTL 256 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 + + V + I G VDG D AV A + AV + R+ +GP+++E +TYR H+ +D A Sbjct: 257 AHKAVGYGITGRLVDGNDAPAVHAVLGAAVEHARSGRGPVLVEAITYRLDAHTSADDATR 316 Query: 295 YRTREEINEMRSNHDPIEQVRKRL 318 YRT EE+ R+ DP+ + + L Sbjct: 317 YRTSEEVEAWRAR-DPLTLLERHL 339 >gi|307331247|ref|ZP_07610371.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces violaceusniger Tu 4113] gi|306883125|gb|EFN14187.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Streptomyces violaceusniger Tu 4113] Length = 380 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 76/308 (24%), Positives = 141/308 (45%), Gaps = 12/308 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R ++ RR+ +A L G + + GQEA V + L + D + +YR+ Sbjct: 54 HRELVRGRRYNTQATALTRQGRLAVYPS-STGQEACQVAAGLVLEDRDWLFPSYRD---T 109 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 LA V + LT +G G H + + Q+ G+A A + Sbjct: 110 LAAVVRGLDPVDALTLLRGDWHSGYDPHAHRVAPLCT------PLATQLPHAVGLAHAAR 163 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + D + + GDG ++G +E+ N AA+W+ V+++++NN +A+ +++ +A + Sbjct: 164 LKGDDVVALALVGDGGTSEGDFHEALNFAAVWHAPVVFLVQNNGFAISVPLAKQTAAPSL 223 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN- 294 + + V + +PG VDG D+ AV + +AV R GP ++E +TYR H+ +D A Sbjct: 224 AHKAVGYGMPGRLVDGNDVAAVHQVLAEAVRRARGGGGPTLVEAVTYRIEAHTNADDATR 283 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR E+ R+ HDPI + + + + + + ++ + D D Sbjct: 284 YRPDSEVEAWRA-HDPIALLEDAMRDRRLLDDEGARAARESAERLAADLRTRMHQDAVLD 342 Query: 355 PAELYSDI 362 P EL+ + Sbjct: 343 PMELFEHV 350 >gi|62317615|ref|YP_223468.1| 2-oxoisovalerate dehydrogenase E1 component subunit alpha [Brucella abortus bv. 1 str. 9-941] gi|83269598|ref|YP_418889.1| 2-oxoisovalerate dehydrogenase E1 component subunit alpha [Brucella melitensis biovar Abortus 2308] gi|189022867|ref|YP_001932608.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella abortus S19] gi|254698896|ref|ZP_05160724.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella abortus bv. 2 str. 86/8/59] gi|254732342|ref|ZP_05190920.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella abortus bv. 4 str. 292] gi|260544849|ref|ZP_05820670.1| 2-oxoisovalerate dehydrogenase E1 component [Brucella abortus NCTC 8038] gi|260760140|ref|ZP_05872488.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella abortus bv. 4 str. 292] gi|260763378|ref|ZP_05875710.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|62197808|gb|AAX76107.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella abortus bv. 1 str. 9-941] gi|82939872|emb|CAJ12881.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella melitensis biovar Abortus 2308] gi|189021441|gb|ACD74162.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella abortus S19] gi|260098120|gb|EEW81994.1| 2-oxoisovalerate dehydrogenase E1 component [Brucella abortus NCTC 8038] gi|260670458|gb|EEX57398.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella abortus bv. 4 str. 292] gi|260673799|gb|EEX60620.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] Length = 395 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 84/290 (28%), Positives = 137/290 (47%), Gaps = 6/290 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 72 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 131 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 251 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 GHS S DP+ YR + E N+ DPI +++ L+ SE K+ E Sbjct: 310 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQAE 358 >gi|183979313|dbj|BAG30755.1| similar to CG8199 [Papilio xuthus] Length = 431 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 87/332 (26%), Positives = 161/332 (48%), Gaps = 14/332 (4%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 ++ E +KE ++ YR M+ + + ++ + G + F G+E + +G Sbjct: 73 IIDSREEPNIDKESLINMYRNMIQLNQMDKILYESQRQGRIS-FYMTNYGEEGIHMGSAA 131 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +L+ D + YRE G +L + S+++ + G KG+ +H S ++ Sbjct: 132 ALSPRDLVFAQYREVGVLLHRAITVSELVNQCYGDCEDPGKGRQMPVHYGSKQHNIVTIS 191 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + Q+ G A+A K ++ CV+C FG+GAA++G + +FN AA + +I + Sbjct: 192 SPLATQLPQAVGAAYALKRMPNNDRCVICYFGEGAASEGDAHAAFNFAATLDCPIILMCR 251 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI----RAVKATMDKAVAYCRAHK 272 NN YA+ T S + RG +F + ++VDG D RAV + D AV+ Sbjct: 252 NNGYAISTPSSEQYRGDGIAARGPAFGLHTIRVDGTDTLAVYRAVASARDLAVS-----N 306 Query: 273 GPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGDLK 330 P++IE + YR HS SD ++ YR+ EEI + + P++++R L W +E + + Sbjct: 307 KPVLIEAMFYRVGHHSTSDDSSAYRSVEEIQKWAKDESPVQKLRLYLEGKGYWDAETETQ 366 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 ++ R + +++ A+ K P E+ D+ Sbjct: 367 CVK-EARDTVVRAMQDAEKKKLPHWKEMLEDV 397 >gi|51891721|ref|YP_074412.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Symbiobacterium thermophilum IAM 14863] gi|51855410|dbj|BAD39568.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Symbiobacterium thermophilum IAM 14863] Length = 334 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 93/272 (34%), Positives = 128/272 (47%), Gaps = 7/272 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 EQ L+ YR MLL RR +E+ G L G + G EA VG ++ G D Sbjct: 9 LTDEQALAIYRWMLLTRRLDERLGVLQRSGAIP-LALSSRGHEAAQVGAALAFARGKDWW 67 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQV 164 YR+ G +L G +M GR S G + + + + VG Q+ Sbjct: 68 FPYYRDLGAVLVAGTTPLDVMLSSFGRAADPSSGGRQTPYNWGDRRLNIVARSAPVGVQI 127 Query: 165 SLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A A RR D I V C FG+GAA+QG +E N AAL L VI+ +NN +A+ Sbjct: 128 PQAVGVAQA-AVRRGDPIVVYCSFGEGAASQGDFHEGLNWAALHRLPVIFFCQNNGWAIS 186 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 +SR A + + R + I G+ +DG D AV A + +AV RA GP +IE +R Sbjct: 187 VPLSRQVAGGSVAARAAGYGIEGVSLDGTDPFAVHAAVRRAVVRARAGGGPALIEARVHR 246 Query: 284 YRGHSMSD-PANYRTREEINEMRSNHDPIEQV 314 H+ D A YRT E+ R DP+ V Sbjct: 247 LDPHTCDDNHAAYRTGAELRAAREA-DPLPAV 277 >gi|330448099|ref|ZP_08311747.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492290|dbj|GAA06244.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 368 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 87/295 (29%), Positives = 142/295 (48%), Gaps = 9/295 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 L YR M+L+R +++KA L G +G + HL G EA+ + + ++ D YR+ Sbjct: 32 LRFYRDMVLVRHYDKKAIALQRTGKLGTYPSHL--GAEAIGIAIGHAMEPTDTFAPYYRD 89 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 + A GV K + G + G S + + F + Q S GIA Sbjct: 90 MPALWARGVSMEKNLQYWGGDELG-SDFPPAPNQLHNDDMPFCVP---IATQCSHAVGIA 145 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A K + + VV GDGA ++G ES N A +WN+ +++VI NNQ+A+ + Sbjct: 146 AAMKIKGLHRATVVTCGDGATSKGDFLESLNCAGIWNIPLVFVINNNQWAISVPLHLQCH 205 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + + I GM VDG DI A+ M ++ + KG +IE ++YR H+ +D Sbjct: 206 AEHLVDKAKGAGIEGMLVDGNDIIAMYDAMLYSLDKAKKGKGATLIEAISYRLCDHTTAD 265 Query: 292 PAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 A+ YR+ +E+ E +DP+ +++ L++ SE E + K IN +VE Sbjct: 266 DASRYRSDDEL-EQAWQYDPVARLKTYLINQGLWSEEQEIEWQHECDKYINEAVE 319 >gi|195330380|ref|XP_002031882.1| GM23814 [Drosophila sechellia] gi|194120825|gb|EDW42868.1| GM23814 [Drosophila sechellia] Length = 439 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 83/310 (26%), Positives = 140/310 (45%), Gaps = 4/310 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M+L+ ++ + G + F G+EA +G +L D + YRE G + Sbjct: 98 FRDMVLLNTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAALEMRDLIYGQYREAGVL 156 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G + + + G + +GK +H S + F + Q+ G A+A K Sbjct: 157 VWRGFRIDQFIDQCYGNTDDLGRGKQMPVHYGSRELNFVTISSPLSTQMPQAVGAAYAMK 216 Query: 176 YRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 R + CVVC FG+GAA++G + +FN AA I NN +A+ T Sbjct: 217 LRPDNDACVVCYFGEGAASEGDAHAAFNFAATLGCPTILFCRNNGFAISTPSHEQYKGDG 276 Query: 235 FSKRG-VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + RG + + I ++VDG D+ AV M A Y P++ E L YR HS SD + Sbjct: 277 IAGRGPMGYGITTIRVDGTDVFAVYNAMKAAREYVLKENKPVVFEALAYRVGHHSTSDDS 336 Query: 294 N-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR EEI S PI ++++ ++H W E E ++RK + + ++ + Sbjct: 337 TAYRPAEEIEIWNSVEHPISKLKRYMVHKGWFDETVENEYVKDIRKKVLKQIAVSEKKLK 396 Query: 353 PDPAELYSDI 362 + E++ + Sbjct: 397 SNWREMFEGV 406 >gi|315605069|ref|ZP_07880121.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315313176|gb|EFU61241.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 817 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 101/402 (25%), Positives = 164/402 (40%), Gaps = 72/402 (17%) Query: 31 VDCVDIP-----FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF---- 81 V DIP F E++ + K+ + M+++R FE + G G Sbjct: 18 VKFPDIPVNQYRFDRDTEIARYGKDGLVQMLHDMIVVRTFESMLDSIKKTGAWEGVEYNH 77 Query: 82 ---CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA--------------------- 117 HL IGQE+ VG L+ D + ++R HG ILA Sbjct: 78 RGPAHLGIGQESAYVGQSFVLSPQDFIFGSHRSHGEILAKCYSAMHQMDDGQLEDIMKGF 137 Query: 118 -----------CGVDASK----------IMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 G +K +AE+ R+ G ++G GGSMH F G Y Sbjct: 138 LGGETLSYAEKIGYSDTKDLTENFILFGALAEIFARKSGFNRGLGGSMHTFFLPFGSYPN 197 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA------ALW--- 207 + IVG + G A + R I + GD A G V+E+ N A +LW Sbjct: 198 NAIVGGSAPIANGAALFKRINRKPGIVISNVGDAALACGPVWEALNFASMDQFRSLWREE 257 Query: 208 ---NLNVIYVIENNQYAM-GTSVSRASAQTNFSKRGVSFNIPGM---QVDGMDIRAVKAT 260 N +++ NN Y M G + ++ G + N M +VDG++ AV Sbjct: 258 DGGNPPILFNFFNNFYGMGGQTFGETMGYEILARVGAALNPEAMHAERVDGLNPLAVADA 317 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 + +GP++++ +TYR+ GHS SD ++YRT+EE++ + D I++ L+ Sbjct: 318 TTRKKKILEEGRGPVLMDTITYRFSGHSPSDASSYRTKEEVD-LWEQVDCIKEYSDLLIS 376 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDK-EPDPAELYSD 361 N + D+ ++ + ++ A D+ P A+ Y D Sbjct: 377 NGLTTRDDIDSYTSSLTDKLVKVLKLAIDDEATPRVADGYID 418 >gi|237817164|ref|ZP_04596156.1| 2-oxoisovalerate dehydrogenase subunit alpha [Brucella abortus str. 2308 A] gi|237787977|gb|EEP62193.1| 2-oxoisovalerate dehydrogenase subunit alpha [Brucella abortus str. 2308 A] Length = 463 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 84/290 (28%), Positives = 137/290 (47%), Gaps = 6/290 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 140 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 198 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 199 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 258 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 259 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 318 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 319 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 377 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 GHS S DP+ YR + E N+ DPI +++ L+ SE K+ E Sbjct: 378 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQAE 426 >gi|225628956|ref|ZP_03786990.1| 2-oxoisovalerate dehydrogenase subunit alpha [Brucella ceti str. Cudo] gi|225616802|gb|EEH13850.1| 2-oxoisovalerate dehydrogenase subunit alpha [Brucella ceti str. Cudo] Length = 478 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 87/325 (26%), Positives = 152/325 (46%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 140 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 198 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 199 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 258 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 259 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 318 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 319 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 377 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ Y + E N+ DPI +++ L+ SE K+ + V I+ ++ Sbjct: 378 GGHSTSDDPSAYHPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQADAEVMDIVVSA 436 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 437 QREAEAIGTLHDGRKPSMRDMFEDV 461 >gi|83859626|ref|ZP_00953146.1| 2-oxoisovalerate dehydrogenase alpha subunit [Oceanicaulis alexandrii HTCC2633] gi|83851985|gb|EAP89839.1| 2-oxoisovalerate dehydrogenase alpha subunit [Oceanicaulis alexandrii HTCC2633] Length = 409 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 6/294 (2%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+L R ++E+ +L G + F G+EAV V M+L D + +YR+ G + A Sbjct: 83 MVLTRIYDERMLKLQRQGKMS-FYMKSTGEEAVAVAAAMALKPNDMVFPSYRQQGILFAR 141 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G + +M KG+ +H + F+ G +G Q G A A Y+ Sbjct: 142 GRNIVDMMCHCISNSRDNLKGRQLPVHYTWAEGSFFTISGNLGTQFPQAAGYAMACAYKG 201 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS--VSRASAQTNFS 236 D+I GDG +G + +A+ + VI+ + NNQ+A+ ++ ++R A T F+ Sbjct: 202 EDQIAASWIGDGTTAEGDFHAGLTLASTYRAPVIFNVVNNQWAISSTQNIARGDAPT-FA 260 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANY 295 +G+ + + ++VDG D AV A A R KG ++E+ TYR HS S DP Y Sbjct: 261 AKGLGYGLASIRVDGNDFLAVYAATQWAAERARQGKGATVLELFTYRADAHSTSDDPTKY 320 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 R + E + DPIE++++ L+ E ++E + ++ S + A+S Sbjct: 321 RPKTEFDRWPLG-DPIERLKQHLIGKGEWDEDRHAKLEEQMTALVVKSYKEAES 373 >gi|319780620|ref|YP_004140096.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166508|gb|ADV10046.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 410 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/284 (27%), Positives = 136/284 (47%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + ++ L+ R M+ +R F+ + G F +G+EAV + +L GD Sbjct: 72 LSSDELLTGLRHMMTLRTFDARMQMAQRQGKTS-FYMQHLGEEAVACAFRKALAPGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A G +M ++ + KG+ + S ++GF+ G + Q Sbjct: 131 PTYRQAGLLIADGYPMVTMMNQIYSNEADPLKGRQLPVMYSSKEHGFFSISGNLATQYIQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ +I GDG+ + + + A+ + V+ + NNQ+A+ T Sbjct: 191 AVGWAMASAISNDSRIAAAWIGDGSTAESDFHSALVFASTYKAPVVLNVVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG+ F IP ++VDG D AV A A R++ GP ++E +TYR Sbjct: 251 GIARGGSGT-FAARGLGFGIPSLRVDGNDYLAVHAVAKWAAERARSNLGPTLVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLH-NKWASE 326 HS S DP+ YR + E ++ DPI +++ L+ W+ E Sbjct: 310 GAHSSSDDPSAYRPKTE-SDAWPLGDPIVRLKNHLIALGVWSDE 352 >gi|171320119|ref|ZP_02909184.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Burkholderia ambifaria MEX-5] gi|171094628|gb|EDT39677.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Burkholderia ambifaria MEX-5] Length = 410 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 81/290 (27%), Positives = 132/290 (45%), Gaps = 9/290 (3%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F L +G+EA+ M+L GD YR+ ++A V +++ +L +G KG+ Sbjct: 105 FYMLSLGEEAIGAAHAMALRHGDMCFPTYRQQSILIARNVPLERMICQLMSNEGDPLKGR 164 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 + + GF+ G + Q G A A+ + KI GDGA + + + Sbjct: 165 QLPVMYSDREAGFFSISGNLATQFIQAVGWAMASAIKGDTKIASAWIGDGATAEADFHTA 224 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKA 259 A ++ V+ + NNQ+A+ T + A + T F+ RGV I ++VDG D A+ A Sbjct: 225 LTFAHVYRAPVVLNVVNNQWAISTFQAIAGGEGTTFAGRGVGCGIASLRVDGNDFLAIYA 284 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 A R + GP +IE +TYR HS S DP YR ++ DPI + ++ L Sbjct: 285 ASTWAAERARRNLGPTLIEWVTYRAGAHSTSDDPTKYRPSDDWAHFPLG-DPIARFKQHL 343 Query: 319 LHNK-W---ASEGDLKEIEMNVRKIINNSVEFAQ--SDKEPDPAELYSDI 362 + W A + E+E V + +F D+ P PA ++ D+ Sbjct: 344 IAKGIWSDSAHDALTAELEAEVIAAQQEAEKFGTLADDRIPSPASMFDDV 393 >gi|170699377|ref|ZP_02890423.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Burkholderia ambifaria IOP40-10] gi|170135691|gb|EDT03973.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Burkholderia ambifaria IOP40-10] Length = 410 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 87/330 (26%), Positives = 146/330 (44%), Gaps = 10/330 (3%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G + + + ++ R ML R F+ + + F L +G+EA+ M+L Sbjct: 66 GPWAPDLDDARLIAGMRAMLKTRIFDARMMIAQRQKKIS-FYMLSLGEEAIGTAHAMALR 124 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 GD YR+ ++A V +++ +L +G KG+ + + GF+ G + Sbjct: 125 HGDMCFPTYRQQSILIARDVPLERMICQLMSNEGDPLKGRQLPVMYSDREAGFFSISGNL 184 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q G A A+ + KI GDGA + + + A ++ V+ + NNQ+ Sbjct: 185 ATQFIQAVGWAMASAIKGDTKIASAWIGDGATAEADFHTALTFAHVYRAPVVLNVVNNQW 244 Query: 221 AMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 A+ T + A + T F+ RGV I ++VDG D A+ A A R + GP +IE Sbjct: 245 AISTFQAIAGGEGTTFAGRGVGCGIASLRVDGNDFLAIYAASTWAAERARRNLGPTLIEW 304 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-W---ASEGDLKEIEM 334 +TYR HS S DP YR ++ DPI + ++ L+ W A + E+E Sbjct: 305 VTYRAGAHSTSDDPTKYRPSDDWAHFPLG-DPIARFKQHLIAKGIWSDSAHDALTAELEA 363 Query: 335 NVRKIINNSVEFAQ--SDKEPDPAELYSDI 362 V + +F D+ P PA ++ D+ Sbjct: 364 EVIAAQKEAEKFGTLADDRIPSPASMFDDV 393 >gi|255326067|ref|ZP_05367154.1| 2-oxoisovalerate dehydrogenase subunit alpha [Rothia mucilaginosa ATCC 25296] gi|255296778|gb|EET76108.1| 2-oxoisovalerate dehydrogenase subunit alpha [Rothia mucilaginosa ATCC 25296] Length = 388 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 91/325 (28%), Positives = 144/325 (44%), Gaps = 31/325 (9%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + N + AYRLM RRF+++A L G + + GQEA VG ++ D Sbjct: 33 IEDVNADTLREAYRLMYTTRRFDDEATALQRQGQLALWV-PSRGQEAAQVGSALAYAPND 91 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI--VG 161 + +YREH L GVD + +T +G + G H F T + VG Sbjct: 92 YIFPSYREHAVALTRGVDFRDL---ITIFRGSTTHGWDMKAHNFHTYTKVLAAQTLHAVG 148 Query: 162 AQVSL---------------GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 + L G G A V FGDG++ +G +ES AA Sbjct: 149 YAMGLNFDADIEAETGARRTGQGQATDPAEDTQKPAVAVYFGDGSSTEGDAHESMVFAAS 208 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 +N V++ ++NN++A+ ++ S R + G++VDG D+ AV A A+ Sbjct: 209 YNAPVLFFVQNNRWAISVPFE-VQSRVPVSTRAAGYGFEGIRVDGNDVLAVLAATRYAME 267 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 RA +GP++IE TYR H+ + DP YRT ++ E DP+ ++ K L +A Sbjct: 268 KIRAGEGPVLIEAETYRLGPHTTADDPTKYRTDADL-EGPLRRDPMLRLEKHLREQGYAD 326 Query: 326 E-------GDLKEIEMNVRKIINNS 343 + ++I VR+ + NS Sbjct: 327 DAFFAEVAEAAQQIASGVREAVLNS 351 >gi|241554279|ref|YP_002979492.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863585|gb|ACS61247.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 410 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 153/330 (46%), Gaps = 18/330 (5%) Query: 12 DIKMALNPSVSAKRAATSSVDCVDIPF-------LEGFEVSEF----NKEQELSAYRLML 60 ++K+A SV +S D D+ + EG V + + E L+ R M+ Sbjct: 26 NVKIAKAGSVPRPEVDVASEDIRDLAYSIIRVLNREGEAVGPWAGSLSNEALLTGLRNMM 85 Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 +R F+ + G F +G+EAV + +L GD YR+ G ++A Sbjct: 86 KLRAFDARMLMAQRQGKTS-FYMQHLGEEAVSCAFRKALETGDMNFPTYRQAGLLIADDY 144 Query: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 ++M ++ + +G+ + S ++GF+ G + Q G A A+ + Sbjct: 145 PMVEMMNQIYSNESDPLRGRQLPIMYSSKEHGFFTISGNLATQYVQAVGWAMASAIKNDS 204 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT--SVSRASAQTNFSKR 238 +I GDG+ + + + A+ + VI I NNQ+A+ T ++R + T F+ R Sbjct: 205 RIAAAWIGDGSTAESDFHSALVFASTYKAPVILNIVNNQWAISTFQGIARGGSGT-FAAR 263 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRT 297 G+ F IP ++VDG D AV A A R + GP +IE +TYR HS S DP+ YR Sbjct: 264 GLGFGIPALRVDGNDYLAVHAVAYWAAERARRNLGPTLIEYVTYRVGAHSTSDDPSAYRP 323 Query: 298 REEINEMRSNHDPIEQVRKRLL-HNKWASE 326 + E +E DP+ +++K L+ W+ E Sbjct: 324 KTE-SEAWPLGDPVLRLKKHLIVKGAWSEE 352 >gi|90108857|pdb|2BFD|A Chain A, Reactivity Modulation Of Human Branched-Chain Alpha- Ketoacid Dehydrogenase By An Internal Molecular Switch Length = 400 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 86/321 (26%), Positives = 141/321 (43%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 106 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + RE G ++ MA+ G + KG+ +H + F + Sbjct: 107 DLVFGQAREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 166 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 167 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 226 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 227 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R S SD ++ +R+ +E+N PI ++R LL W E K R+ + Sbjct: 287 RIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVM 346 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 347 EAFEQAERKPKPNPNLLFSDV 367 >gi|260167270|ref|ZP_05754081.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Brucella sp. F5/99] gi|261756678|ref|ZP_06000387.1| 2-oxoisovalerate dehydrogenase E1 component [Brucella sp. F5/99] gi|261736662|gb|EEY24658.1| 2-oxoisovalerate dehydrogenase E1 component [Brucella sp. F5/99] Length = 410 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 87/325 (26%), Positives = 152/325 (46%), Gaps = 12/325 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 72 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 131 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 251 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHS S DP+ Y + E N+ DPI +++ L+ SE K+ + V I+ ++ Sbjct: 310 GGHSTSDDPSAYHPKAE-NDAWPLGDPILRLKNHLIKRGVWSEERHKQADAEVMDIVVSA 368 Query: 344 VEFAQS------DKEPDPAELYSDI 362 A++ ++P +++ D+ Sbjct: 369 QREAEAIGTLHDGRKPSMRDMFEDV 393 >gi|153010872|ref|YP_001372086.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Ochrobactrum anthropi ATCC 49188] gi|151562760|gb|ABS16257.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Ochrobactrum anthropi ATCC 49188] Length = 410 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 6/287 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+++R ++ + G F +G+EAV + +L +GD YR+ G ++ Sbjct: 82 RHMMILRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNFPTYRQAGLLI 140 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 A +M ++ + KG+ + S ++GF+ G + Q + G A A+ Sbjct: 141 ADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSQEHGFFTISGNLATQYTQAVGWAMASAI 200 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT--SVSRASAQTN 234 KI GDG+ + + + A+ + V+ I NNQ+A+ T ++R + T Sbjct: 201 SHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQGIARGGSGT- 259 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 F+ RG F IP ++VDG D AV A AV R + GP IIE +TYR GHS S DP+ Sbjct: 260 FAARGHGFGIPALRVDGNDYLAVHAVAKWAVERARRNLGPTIIEYVTYRAGGHSTSDDPS 319 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YR + E + DPI +++ L+ S+ K+ E V ++ Sbjct: 320 AYRPKAESDAWPLG-DPILRLKNHLIKRGVWSDERHKQAEAEVMDLV 365 >gi|254515621|ref|ZP_05127681.1| pyruvate dehydrogenase, alpha subunit (lipoamide) [gamma proteobacterium NOR5-3] gi|219675343|gb|EED31709.1| pyruvate dehydrogenase, alpha subunit (lipoamide) [gamma proteobacterium NOR5-3] Length = 327 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 84/316 (26%), Positives = 140/316 (44%), Gaps = 8/316 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + EQ+ + YR ++ F + G + GF H G A V L + D + Sbjct: 3 LSTEQKTTLYRNLIRADEFNRMMYRRMMQGKLIGFYHPAEGAIAPGVAAASFLNQDDNLS 62 Query: 107 TAYREHG--HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +R HG H+L+ G+D +AE TG+ G KG+ + H ++ Y G +G Sbjct: 63 PHHRGHGITHMLSKGIDIKYYLAEHTGKDTGCCKGRS-AFHFSFPEHKVYMMSGFIGYNF 121 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + G FA K R ++ + C GDG+ QG+ +E+ +A W L VI+ ENN ++ + Sbjct: 122 APVVGWGFAAKRRNQGQVVMNCSGDGSYGQGRAHEAMLMAQNWKLPVIFFCENNGMSIFS 181 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + + S + +P VDG D+ AV +A+A R GP IE T R+ Sbjct: 182 TAMEMHPKEHISSLADGYGMPSTIVDGQDVFAVAEACVEAIARARQGDGPTFIEAKTLRF 241 Query: 285 RGHSMSDP----ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 H + P R+ EE MR +P+ R+L ++ + +I + + Sbjct: 242 NEHDIGTPDLSGWEERSEEEHASMRER-EPVRIATARVLDEGLLNQAAIDQIIEETKAEV 300 Query: 341 NNSVEFAQSDKEPDPA 356 +FA S + P+ Sbjct: 301 QGVEDFADSSEIARPS 316 >gi|148555060|ref|YP_001262642.1| branched-chain alpha-keto acid dehydrogenase E1 component [Sphingomonas wittichii RW1] gi|148500250|gb|ABQ68504.1| branched-chain alpha-keto acid dehydrogenase E1 component [Sphingomonas wittichii RW1] Length = 419 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 6/274 (2%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 E L R M L R F+E+ + G F C G+EA VG +L D + Sbjct: 76 PETLLKILRSMALTRAFDERLYRAQRQGKTS-FYMKCTGEEATSVGAAHALDYDDMCFPS 134 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG-FYGGHGIVGAQVSLG 167 YR+ G ++A ++ ++ + KG+ + M+S + F+ G + Q Sbjct: 135 YRQQGLLIARDWPIVDMINQIYSNRADRLKGRQMPI-MYSVRQASFFSISGNLTTQYPQA 193 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A A+ R +I G+G+ +G + + AA++ VI + NNQ+A+ + Sbjct: 194 VGWAMASAARGDTRIAAAWCGEGSTAEGDFHSALTFAAVYRAPVILNVINNQWAISSFSG 253 Query: 228 RASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A A+ T F+ R + + I G++VDG D AV A A R + GP +IE TYR G Sbjct: 254 FAGAEATTFAARAIGYGIAGLRVDGNDALAVYAATQWAADRARNNHGPTLIEHFTYRAEG 313 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 HS S DP YR+ EE + DPI +++K ++ Sbjct: 314 HSTSDDPTKYRSAEEGGKWPLG-DPIARLKKHVV 346 >gi|254705975|ref|ZP_05167803.1| 2-oxoisovalerate dehydrogenase subunit alpha [Brucella pinnipedialis M163/99/10] Length = 355 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 72 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 131 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 191 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 251 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASE 326 GHS S DP+ YR + E N+ DPI +++ L+ W+ E Sbjct: 310 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEE 352 >gi|255030621|ref|ZP_05302572.1| hypothetical protein LmonL_18708 [Listeria monocytogenes LO28] Length = 257 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 79/253 (31%), Positives = 120/253 (47%), Gaps = 4/253 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGH 114 Y ML+ RR +E+ L G + F GQE +G + + D + YR+ Sbjct: 2 YETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYALPYYRDLAV 60 Query: 115 ILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +LA G+ A IM + + S G+ H N V Q GI A Sbjct: 61 VLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLA 120 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K + G+G++NQG +E N A++ L V++VI NNQYA+ S+ A Sbjct: 121 AKMAGDEIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQYAISVPASKQYAAE 180 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-SMSDP 292 S R + + IPG +VDG ++ V A +A R +GP +IE ++YR+ H S D Sbjct: 181 KLSDRAIGYGIPGERVDGTNMGEVYAAFKRAADRARNGEGPTLIETVSYRFTPHSSDDDD 240 Query: 293 ANYRTREEINEMR 305 ++YR+REE+NE + Sbjct: 241 SSYRSREEVNEAK 253 >gi|13473769|ref|NP_105337.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Mesorhizobium loti MAFF303099] gi|14024520|dbj|BAB51123.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Mesorhizobium loti MAFF303099] Length = 410 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 6/276 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E+ L R M+ +R F+ + G F +G+EAV + +L GD Sbjct: 72 LSNEELLEGLRHMMTLRTFDARMQMAQRQGKTS-FYMQHLGEEAVSCAFRKALEPGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A G +M ++ + KG+ + S ++GF+ G + Q Sbjct: 131 PTYRQAGLLIADGYPMVTMMNQIYSNEADPLKGRQLPIMYSSKEHGFFSISGNLATQYIQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ + NNQ+A+ T Sbjct: 191 AVGWAMASAISNDSKIAAAWIGDGSTAESDFHSALVFASTYKAPVVLNVVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG+ F IP ++VDG D AV A A R + GP ++E +TYR Sbjct: 251 GIARGGSGT-FAARGLGFGIPSLRVDGNDYLAVHAVAKWAAERARKNLGPTLVEYVTYRA 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL 319 HS S DP+ YR + E ++ DP+ +++ L+ Sbjct: 310 GAHSSSDDPSAYRPKTE-SDAWPLGDPVVRLKNHLI 344 >gi|309812942|ref|ZP_07706670.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Dermacoccus sp. Ellin185] gi|308433014|gb|EFP56918.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Dermacoccus sp. Ellin185] Length = 426 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 97/355 (27%), Positives = 158/355 (44%), Gaps = 18/355 (5%) Query: 5 KQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRR 64 K D+T G M + A S + V+ P++E + E+ + YR M+L+RR Sbjct: 50 KPDITDGGPDMV---QLIAPNGTRSPMTSVNEPYMEALKA--ITAEEVRAMYRDMVLVRR 104 Query: 65 FEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASK 124 F+ + L G +G + L +GQEA V +L E D YREHG G+ S+ Sbjct: 105 FDIEGYSLQRQGELGLWPQL-LGQEAAQVAAGHALREQDYGFPGYREHGVAFCRGIQPSQ 163 Query: 125 IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKI 182 + A G G G H F+T G + VG + L D Sbjct: 164 VFALYRGVTHG---GHDPRKHNFNTSTIVIGNQMLNAVGYAMGLRLDGVVGTGDVNVDAA 220 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 + GDG +QG E+ AA+ + +++ I+NN +A+ +R + KR F Sbjct: 221 VMAFTGDGGTSQGDFNEAMVYAAVNHSPMVFFIQNNGWAISEPNTRQFIIPPY-KRADGF 279 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEI 301 PG++ DG D+ A A +++ R+ GP ++E TYR H+ S DP+ YR + Sbjct: 280 GFPGVRTDGNDVLATYAVTRRSLDNARSGLGPTLVEAFTYRMGAHTTSDDPSRYRDSAHV 339 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE-PDP 355 ++ DPI ++R L A +++ +++ + E+ +S E PDP Sbjct: 340 EAWKAK-DPIARLRSLLERENHADAAFFDDVDAEAKEL---AAEWRRSCLEMPDP 390 >gi|156553528|ref|XP_001601296.1| PREDICTED: similar to GA20891-PA [Nasonia vitripennis] Length = 408 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 84/317 (26%), Positives = 149/317 (47%), Gaps = 5/317 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 NK+ + AY+ ML + + + G + F G+EAV +G + D + Sbjct: 61 NKDTLVKAYKSMLQLHTMDSILYESQRQGRIS-FYMTNFGEEAVQIGSAAAWLAEDLIYA 119 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YRE G +L G S+ + + G +KG+ +H S F + Q+ Sbjct: 120 QYRESGILLWRGFHISEFVNQCYGNHEDKNKGRQMPVHYGSKTLNFMTISSPLTTQLPQA 179 Query: 168 TGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A+ K R K CV C FG+GAA++G + + N AA ++++ NN YA+ T Sbjct: 180 AGAAYGIKLR-GKKACVACYFGEGAASEGDAHAALNFAATLACPIVFICRNNGYAISTPS 238 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + + +G ++ I ++VDG DI A+ + A Y ++ P++IE +TYR Sbjct: 239 HQQYNGDGIAAKGPAYGINTIRVDGNDILAIYNATEYARNYAVENQKPVLIEAMTYRVGH 298 Query: 287 HSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HS SD + YR+ EI+ R+N PI ++R L + +E+ ++ + ++ Sbjct: 299 HSTSDDSTAYRSNTEISS-RANDSPILRLRSYLESCNLWDQSKEEELSKESKRNVIEAIA 357 Query: 346 FAQSDKEPDPAELYSDI 362 A+ +P +++ D+ Sbjct: 358 AAEKKLKPGWKDMFEDV 374 >gi|256001522|gb|ACU52085.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001538|gb|ACU52093.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] gi|256001550|gb|ACU52099.1| pyruvate dehydrogenase alpha subunit [Chlamydia trachomatis] Length = 184 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 68/182 (37%), Positives = 103/182 (56%), Gaps = 3/182 (1%) Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 FE + + Y G+VGGF H IGQEAV + ++YR HG L + Sbjct: 1 EFEIRGEEAYLEGLVGGFYHSYIGQEAVATAAIACTGKDHWFFSSYRCHGVALLLDIPLR 60 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 ++ AEL G++ G + G+GGSMHM + GG GIVG Q+ L G AF+ KY+ S I Sbjct: 61 QLAAELLGKETGCALGRGGSMHMCGDR--LPGGFGIVGGQIPLAAGAAFSMKYQNSSSIS 118 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK-RGVSF 242 + GDGA QG + + N AL +L ++ +IENN ++MGT++ RA A+ ++ + +S+ Sbjct: 119 MCFIGDGAVAQGVFHVTLNFVALHSLPLMLIIENNGWSMGTALHRAIAKQPIAESQAISY 178 Query: 243 NI 244 + Sbjct: 179 GL 180 >gi|194246557|ref|YP_002004196.1| Thiamine pyrophosphate-dependent dehydrogenase, E1 component (alpha subunit) [Candidatus Phytoplasma mali] gi|193806914|emb|CAP18343.1| Thiamine pyrophosphate-dependent dehydrogenase, E1 component (alpha subunit) [Candidatus Phytoplasma mali] Length = 363 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 12/285 (4%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE L Y+ M+L R + KA Q G + + L IGQEA V +L + D + Sbjct: 34 KEILLKIYKTMILERIADIKAFQYQRQGRMLTYV-LNIGQEACQVAAAAALEKQDWVSPY 92 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 +R+ G L GV I G + KG M + + I+G+ +++G Sbjct: 93 FRDIGFYLYKGVPLKNIYLYWYGNE------KGSKME---PETRILPVNIIIGSGINIGA 143 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A A+K ++ D++ V GDG + + + N A+ + ++ +I+NNQYA+ T Sbjct: 144 GLALASKIQKKDEVVVATIGDGGTSHEEFFAGLNYASTFKAPLVVLIQNNQYAISTPRKI 203 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 AS +++ +F IPG+Q+DG D+ AV + + +AV R +G +IE TYR H+ Sbjct: 204 ASNAATLAQKCYAFGIPGIQIDGNDVLAVYSAVKEAVDNARKGEGSSLIEFYTYRMGAHT 263 Query: 289 MSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +D + YRT+EE S DPI + K LL K E D+K+I Sbjct: 264 TNDNTSLYRTKEE-ELAWSKKDPILRFEKYLLWKKVLEEKDIKKI 307 >gi|169606300|ref|XP_001796570.1| hypothetical protein SNOG_06188 [Phaeosphaeria nodorum SN15] gi|160706958|gb|EAT86019.2| hypothetical protein SNOG_06188 [Phaeosphaeria nodorum SN15] Length = 385 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 8/281 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + +G +L D YRE G L G + M +L G+ Sbjct: 49 FYMVSAGEEGISIGSASALHPSDVAFCQYREAGVYLQRGFTLAMFMNQLFANAKDHGLGR 108 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR------RSDKICVVCFGDGAANQ 194 +H S + + + Q+ G A+A K + + ++ V FG+GAA++ Sbjct: 109 NMPVHYGSKELNIHTISSTLATQIPHAAGAAYALKMQNLQNPNQEKRVAVCYFGEGAASE 168 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + I++ NN YA+ T S + RG + I ++VDG DI Sbjct: 169 GDFHAALNIAATRQVPCIFICRNNGYAISTPTSDQYRGDGIASRGAGYGIATLRVDGNDI 228 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV+ +A + G P+++EM+ YR HS SD + YR R E+ + + +PI Sbjct: 229 FAVRRATKQARLLALENGGQPVLVEMMAYRVGHHSTSDDSFAYRQRVEVEDWKRRDNPIT 288 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++RK L + + KE+ RK + + E A+ +K+P Sbjct: 289 RLRKWLEGRELWDDAQEKELRSTTRKEVLRAFEEAEKEKKP 329 >gi|30022061|ref|NP_833692.1| pyruvate dehydrogenase E1 component alpha subunit [Bacillus cereus ATCC 14579] gi|206971093|ref|ZP_03232044.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus AH1134] gi|218232014|ref|YP_002368773.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus B4264] gi|218899128|ref|YP_002447539.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus G9842] gi|296504466|ref|YP_003666166.1| pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis BMB171] gi|29897618|gb|AAP10893.1| Pyruvate dehydrogenase E1 component alpha subunit [Bacillus cereus ATCC 14579] gi|206733865|gb|EDZ51036.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus AH1134] gi|218159971|gb|ACK59963.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus B4264] gi|218543451|gb|ACK95845.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Bacillus cereus G9842] gi|296325518|gb|ADH08446.1| pyruvate dehydrogenase E1 component alpha subunit [Bacillus thuringiensis BMB171] gi|326941745|gb|AEA17641.1| pyruvate dehydrogenase E1 component alpha subunit [Bacillus thuringiensis serovar chinensis CT-43] Length = 371 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 96/317 (30%), Positives = 151/317 (47%), Gaps = 25/317 (7%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + +Q R M+ R ++++ L G +G F GQEA + +L D Sbjct: 41 MPELSDDQLKELMRRMVYTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHFALEAED 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + S+G M N I+GAQ Sbjct: 100 FILPGYRDVPQLVWHGLPLYQAFL--------FSRGHFMGNQMPENVNAL-APQIIIGAQ 150 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K R + + GDG A+QG YE N A + I+V++NN+YA+ Sbjct: 151 IIQTAGVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAIS 210 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH----KGPIIIEM 279 T V + SA +++ V+ I G+QVDGMD AV A A A+ R +GP +IE Sbjct: 211 TPVEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYA----ATAFARERAVNGEGPTLIET 266 Query: 280 LTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDLKEIEMNV 336 LT+RY H+M+ DP YRT++ NE DPI + RK L W+ E + IE Sbjct: 267 LTFRYGPHTMAGDDPTRYRTKDIENEW-EQKDPIVRFRKFLEAKGLWSQEVEETVIE-EA 324 Query: 337 RKIINNSVEFAQSDKEP 353 ++ I ++ A++D+ P Sbjct: 325 KEDIKQAI--AKADQAP 339 >gi|239833851|ref|ZP_04682179.1| 2-oxoisovalerate dehydrogenase subunit alpha [Ochrobactrum intermedium LMG 3301] gi|239821914|gb|EEQ93483.1| 2-oxoisovalerate dehydrogenase subunit alpha [Ochrobactrum intermedium LMG 3301] Length = 470 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 6/287 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+++R ++ + G F +G+EAV + +L +GD YR+ G ++ Sbjct: 142 RHMMILRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNFPTYRQAGLLI 200 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 A +M ++ + KG+ + S ++GF+ G + Q + G A A+ Sbjct: 201 ADDYPLVTMMNQIFSNEHDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQAVGWAMASAI 260 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT--SVSRASAQTN 234 KI GDG+ + + + A+ + V+ I NNQ+A+ T ++R + T Sbjct: 261 SHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQGIARGGSGT- 319 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 F+ RG F IP ++VDG D AV A AV R + GP IIE +TYR GHS S DP+ Sbjct: 320 FAARGHGFGIPALRVDGNDYLAVHAVAKWAVERARRNLGPTIIEYVTYRAGGHSTSDDPS 379 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YR + E + DPI +++ L+ S+ K+ E V ++ Sbjct: 380 AYRPKAESDAWPLG-DPILRLKNHLIKRDVWSDERHKQAEAEVMDLV 425 >gi|326803936|ref|YP_004321754.1| pyruvate dehydrogenase E1 component, alpha subunit [Aerococcus urinae ACS-120-V-Col10a] gi|326651482|gb|AEA01665.1| pyruvate dehydrogenase E1 component, alpha subunit [Aerococcus urinae ACS-120-V-Col10a] Length = 367 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 88/323 (27%), Positives = 144/323 (44%), Gaps = 19/323 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + +Q + + M+ R E++ L G +G F GQEA + + + D Sbjct: 37 MPDLTDDQLVEIMKRMVFSRTLHERSMALARQGRLG-FYAPTYGQEASQMASSYAFEQDD 95 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YR+ ++A G+ K G G + H + I+GAQ Sbjct: 96 WLFPGYRDIPQLVAKGLPVDKAFHWSRGHVEGNDYPE--DFHAMPPQI-------IIGAQ 146 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G G A K S + GDG ++QG YE++N A + +++ I+NN +A+ Sbjct: 147 LIQGMGNAVGQKLNGSKNVTYTYTGDGGSSQGDSYEAWNYAGRYKAPIVFFIQNNGFAIS 206 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + SA + +++ V+ +PG+QVDG D AV A +A + A GP++IE +T R Sbjct: 207 TPRHKQSAAKSLAQKAVAAGMPGVQVDGNDALAVYAVAKQAREWAAAGNGPVLIETITNR 266 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKII 340 HS S DP YRT E+I S +P+ + R L W + + +E + Sbjct: 267 LGAHSTSGDDPKIYRTDEDIQSWTS-REPLIRFRAYLEEKGLWDEQSESDYVES-----V 320 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 V+ A E P + SD L Sbjct: 321 KEEVQAAIKKAEAAPKQKVSDFL 343 >gi|289619360|emb|CBI53643.1| unnamed protein product [Sordaria macrospora] Length = 475 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 81/292 (27%), Positives = 137/292 (46%), Gaps = 12/292 (4%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+EAV VG +L+ D + YRE G G S M +L KG+ Sbjct: 146 FYMVSAGEEAVCVGSASALSSEDVVFCQYREQGVFKQRGFTLSDFMNQLFANHKDPGKGR 205 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQ 194 +H S + + + Q+ +G A+A K +R ++ FG+GAA++ Sbjct: 206 NMPVHYGSKELNIHTISSPLATQLPQASGAAYALKIQRMQNPTVPPRVVAAYFGEGAASE 265 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA +++ NN YA+ T + RG+ + I ++VDG D Sbjct: 266 GDFHAALNIAATRGCPAVFICRNNGYAISTPTLEQYRGDGIASRGLGYGIDTIRVDGNDF 325 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV+ +A G P++IE +TYR HS SD + YR + E+ + + +PI Sbjct: 326 WAVREVTKRARELALQDGGKPVLIEAMTYRVSHHSTSDDSFAYRAKVEVEDWKRRDNPIG 385 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA--ELYSDI 362 ++RK + E +E ++R+ I + F+Q++KE PA ++ D+ Sbjct: 386 RLRKWMEAKGIWDENKEREARDSIRREILKA--FSQAEKEKKPAIRTMFEDV 435 >gi|184199990|ref|YP_001854197.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Kocuria rhizophila DC2201] gi|183580220|dbj|BAG28691.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Kocuria rhizophila DC2201] Length = 403 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 79/272 (29%), Positives = 129/272 (47%), Gaps = 25/272 (9%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M RR +E+ L G + + L GQEA +G D++ +YREH Sbjct: 58 YRSMTRARRIDEEGTSLQRQGQLVLWVPLR-GQEAAQIGSTWPTRPTDRLYPSYREHAVA 116 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 GV+ S++M G + ++++++ ++G+QV G A Sbjct: 117 FERGVEPSELMRYFRGLTAAGWDPEEHNLNLYTV---------VLGSQVPHAVGYAMGTV 167 Query: 176 YRR------------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 R + V FGDGA+ +G+V+ES AA ++ V++ I+NNQ+A+ Sbjct: 168 MDRRAAEEAGTPLETEPEAVVAYFGDGASTEGEVHESMVFAASYDAPVLFFIQNNQWAIS 227 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + S + + R + G++VDG DI AV A A+ R +GP++IE TYR Sbjct: 228 VPFATQS-RVPLATRAAGYGFEGLRVDGNDILAVVAATRYALDKIRRGEGPVLIEAETYR 286 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQV 314 H+ + DP YR REE ++ DP+E++ Sbjct: 287 MGAHTTADDPTKYRKREEEDQW-GLLDPVERL 317 >gi|239917208|ref|YP_002956766.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Micrococcus luteus NCTC 2665] gi|281414319|ref|ZP_06246061.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Micrococcus luteus NCTC 2665] gi|239838415|gb|ACS30212.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit [Micrococcus luteus NCTC 2665] Length = 384 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 82/284 (28%), Positives = 133/284 (46%), Gaps = 16/284 (5%) Query: 37 PFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 P L+ + + + + + YR M ++RR + +A L G + + L +GQEA VG Sbjct: 42 PELDPW-IEDVDAAALAALYRQMAVVRRLDVEATHLQRQGELALWPPL-LGQEAAQVGSA 99 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 ++L D + +YRE+G L GV A ++ +G + + Sbjct: 100 VALRPDDFVFPSYRENGVALLRGVPALDLL----------RVWRGSTFSSWDPNETRVAT 149 Query: 157 HGIV-GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 I+ GAQ G A + ++D +V FGDGA +QG V E+ +A + V++ Sbjct: 150 QQIIIGAQALHAVGYAMGVQRDQADVATIVYFGDGATSQGDVNEAMVFSASYQAPVVFFC 209 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +NN +A+ V R + + + R F IP M+VDG D+ AV A AV GP Sbjct: 210 QNNHWAISEPV-RLQTRRSIADRPWGFGIPSMRVDGNDVLAVLAATRAAVERAADGGGPT 268 Query: 276 IIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 +E +TYR H+ + DP YR E+ ++ DP+ +V L Sbjct: 269 FVEAVTYRMGPHTTADDPTRYRDDAELEAWKAR-DPLTRVEAHL 311 >gi|261313408|ref|ZP_05952605.1| 2-oxoisovalerate dehydrogenase E1 component [Brucella pinnipedialis M163/99/10] gi|261302434|gb|EEY05931.1| 2-oxoisovalerate dehydrogenase E1 component [Brucella pinnipedialis M163/99/10] Length = 423 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 140 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 198 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 199 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 258 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ + V+ I NNQ+A+ T Sbjct: 259 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQWAISTFQ 318 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR Sbjct: 319 GIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRA 377 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASE 326 GHS S DP+ YR + E N+ DPI +++ L+ W+ E Sbjct: 378 GGHSTSDDPSAYRPKAE-NDAWPLGDPILRLKNHLIKRGVWSEE 420 >gi|228902478|ref|ZP_04066632.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis IBL 4222] gi|228922723|ref|ZP_04086021.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228941134|ref|ZP_04103689.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228954248|ref|ZP_04116275.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960234|ref|ZP_04121891.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar pakistani str. T13001] gi|228966995|ref|ZP_04128033.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar sotto str. T04001] gi|228974065|ref|ZP_04134637.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980658|ref|ZP_04140965.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis Bt407] gi|229047659|ref|ZP_04193245.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus AH676] gi|229071473|ref|ZP_04204694.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus F65185] gi|229081225|ref|ZP_04213734.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus Rock4-2] gi|229098438|ref|ZP_04229382.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus Rock3-29] gi|229104577|ref|ZP_04235241.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus Rock3-28] gi|229111443|ref|ZP_04240994.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus Rock1-15] gi|229129250|ref|ZP_04258222.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus BDRD-Cer4] gi|229146544|ref|ZP_04274914.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus BDRD-ST24] gi|229152172|ref|ZP_04280365.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus m1550] gi|229180247|ref|ZP_04307591.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus 172560W] gi|229192180|ref|ZP_04319147.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus ATCC 10876] gi|228591291|gb|EEK49143.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus ATCC 10876] gi|228603456|gb|EEK60933.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus 172560W] gi|228631134|gb|EEK87770.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus m1550] gi|228636906|gb|EEK93366.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus BDRD-ST24] gi|228654176|gb|EEL10042.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus BDRD-Cer4] gi|228671825|gb|EEL27118.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus Rock1-15] gi|228678824|gb|EEL33037.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus Rock3-28] gi|228684961|gb|EEL38895.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus Rock3-29] gi|228702087|gb|EEL54564.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus Rock4-2] gi|228711643|gb|EEL63597.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus F65185] gi|228723680|gb|EEL75039.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus cereus AH676] gi|228779062|gb|EEM27322.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis Bt407] gi|228785642|gb|EEM33649.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792729|gb|EEM40293.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar sotto str. T04001] gi|228799502|gb|EEM46462.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar pakistani str. T13001] gi|228805376|gb|EEM51968.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228818528|gb|EEM64598.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228836778|gb|EEM82121.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228857222|gb|EEN01728.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis IBL 4222] Length = 396 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 95/320 (29%), Positives = 153/320 (47%), Gaps = 31/320 (9%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + +Q R M+ R ++++ L G +G F GQEA + +L D Sbjct: 66 MPELSDDQLKELMRRMVYTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHFALEAED 124 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + S+G M N I+GAQ Sbjct: 125 FILPGYRDVPQLVWHGLPLYQAFL--------FSRGHFMGNQMPENVNAL-APQIIIGAQ 175 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K R + + GDG A+QG YE N A + I+V++NN+YA+ Sbjct: 176 IIQTAGVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAIS 235 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH----KGPIIIEM 279 T V + SA +++ V+ I G+QVDGMD AV A A A+ R +GP +IE Sbjct: 236 TPVEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYA----ATAFARERAVNGEGPTLIET 291 Query: 280 LTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL----LHNKWASEGDLKEIE 333 LT+RY H+M+ DP YRT++ NE DPI + RK L L ++ E ++E + Sbjct: 292 LTFRYGPHTMAGDDPTRYRTKDIENEW-EQKDPIVRFRKFLEAKGLWSQEVEETVIEEAK 350 Query: 334 MNVRKIINNSVEFAQSDKEP 353 ++++ I A++D+ P Sbjct: 351 EDIKQAI------AKADQAP 364 >gi|84683575|ref|ZP_01011478.1| 2-oxoisovalerate dehydrogenase alpha subunit [Maritimibacter alkaliphilus HTCC2654] gi|84668318|gb|EAQ14785.1| 2-oxoisovalerate dehydrogenase alpha subunit [Rhodobacterales bacterium HTCC2654] Length = 408 Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 92/332 (27%), Positives = 155/332 (46%), Gaps = 12/332 (3%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G + + ++ + R M+L+R ++ + G F +G+EA+ G + L Sbjct: 64 GDWAPDIDDDELRTGLRHMMLLREYDARMLMAQRQGK-SSFYMQHLGEEAISCGFRRELA 122 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 EGD YR+ G ++A +M ++ +G G+ + S +GF+ G + Sbjct: 123 EGDMNFPTYRQAGLLIADDYPMLLMMNQVYSNEGDTVHGRQLPVFYSSKDHGFFSISGNL 182 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q G A A+ + + I GDG+ + + A+ + V+ I NNQ+ Sbjct: 183 ATQYPQAVGWAMASAIKGATNIAAAWIGDGSTAENDFHAGLVFASTYKAPVVLNIVNNQW 242 Query: 221 AMGT--SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 A+ T ++R + T F+ RG F IP ++VDG D AV+A A RA+ GP +IE Sbjct: 243 AISTFQGIARGGSGT-FAARGHGFGIPALRVDGNDYLAVRAVARWAAQRARANLGPTLIE 301 Query: 279 MLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 +TYR GHS S DP+ YR +EE + DPI ++R L+ SE + E +R Sbjct: 302 YVTYRVAGHSTSDDPSAYRPKEEGSAWPLG-DPILRLRDHLIARGAWSEERHTQAEAEIR 360 Query: 338 KIINNSVEFAQ------SDKEPDPAELYSDIL 363 + + + A+ S + P PA ++ D+ Sbjct: 361 AEVIATQKEAEAIGTLTSGRLPSPAHMFEDVF 392 >gi|324516648|gb|ADY46592.1| 2-oxoisovalerate dehydrogenase subunit alpha [Ascaris suum] Length = 428 Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 96/362 (26%), Positives = 158/362 (43%), Gaps = 4/362 (1%) Query: 2 YVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLL 61 Y++ + V D L+P V +D D + + KE+ + Y+ M L Sbjct: 37 YLSNRKVRFTDKLEVLSPDVLPTFPIYRVLD-FDGNIINQANDPKLEKERYIKMYKDMTL 95 Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 + + G++ F G+EA+ VG L D + YRE G IL G Sbjct: 96 LHTMDNILLNSQRQGLLA-FYMTNYGEEALHVGCSAGLKNDDLIYAQYREVGVILQRGYT 154 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 + M G ++KG+ MH S ++ F + QV G A+A K ++ + Sbjct: 155 VLEFMNSAFGNCHDLAKGRQMPMHYGSKEHNFVYISSPLATQVPQSVGTAYAFKRAKNGR 214 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 I FGDGA+++G SFN A V++V NN YA+ T ++ RG Sbjct: 215 IVCCFFGDGASSEGDTSASFNFAGTLACPVMFVCRNNGYAISTPTAQQYRGDGIVSRGPG 274 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREE 300 F + ++VDG D+ A+ KA A P+++E L+YR HS SD + YR+ ++ Sbjct: 275 FGLHTIRVDGNDLLAM-YNATKAAREVAAQNKPVLLEALSYRIGDHSTSDDSTAYRSADD 333 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 + + + +PI + +K L+ SE + E + + + A K P L+S Sbjct: 334 LEKWNTLLNPITRFKKYLIKQNLWSENEETEWIKKAKADVLAAFAKASKAKLPPIDNLFS 393 Query: 361 DI 362 D+ Sbjct: 394 DV 395 >gi|325519537|gb|EGC98908.1| 2-oxoisovalerate dehydrogenase subunit alpha [Burkholderia sp. TJI49] Length = 410 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 149/330 (45%), Gaps = 10/330 (3%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G + + + ++ R ML R F+ + + F L +G+EA+ M+L Sbjct: 66 GPWAPDLDDARLIAGLRAMLKTRIFDARMMIAQRQKKIS-FYMLSLGEEAIGTAHAMALR 124 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 +GD YR+ ++A V +++ +L +G KG+ + + GF+ G + Sbjct: 125 DGDMCFPTYRQQSILIARDVPLERMICQLMSNEGDPLKGRQLPVMYSDREAGFFSISGNL 184 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q G A A+ + KI GDGA + + + A ++ V+ + NNQ+ Sbjct: 185 ATQFIQAVGWAMASAIKGDTKIASAWIGDGATAEADFHTALTFAHVYRAPVVLNVVNNQW 244 Query: 221 AMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 A+ T + A + T F+ RGV I ++VDG D A+ A A R + GP +IE Sbjct: 245 AISTFQAIAGGEGTTFAGRGVGCGIASLRVDGNDFLAIYAASSWAAERARRNLGPTLIEW 304 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-W---ASEGDLKEIEM 334 +TYR HS S DP+ YR ++ + DPI + ++ L+ W A + ++E Sbjct: 305 VTYRAGPHSTSDDPSKYRPGDDWSHFPLG-DPIARFKRHLIAKGIWSDAAHDALTADLEA 363 Query: 335 NVRKIINNSVEFAQ--SDKEPDPAELYSDI 362 V + ++ D+ P PA ++ D+ Sbjct: 364 EVIAAQKEAEKYGTLADDRIPSPASMFDDV 393 >gi|228909798|ref|ZP_04073621.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis IBL 200] gi|228850087|gb|EEM94918.1| Pyruvate dehydrogenase E1 component subunit alpha [Bacillus thuringiensis IBL 200] Length = 396 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 95/320 (29%), Positives = 153/320 (47%), Gaps = 31/320 (9%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E + +Q R M+ R ++++ L G +G F GQEA + +L D Sbjct: 66 MPELSDDQLKELMRRMVYTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHFALEAED 124 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + S+G M N I+GAQ Sbjct: 125 FILPGYRDVPQLVWHGLPLYQAFL--------FSRGHFMGNQMPENVNAL-APQIIIGAQ 175 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K R + + GDG A+QG YE N A + I+V++NN+YA+ Sbjct: 176 IIQTAGVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAIS 235 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH----KGPIIIEM 279 T V + SA +++ V+ I G+QVDGMD AV A A A+ R +GP +IE Sbjct: 236 TPVEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYA----ATAFARERAVNGEGPTLIET 291 Query: 280 LTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL----LHNKWASEGDLKEIE 333 LT+RY H+M+ DP YRT++ NE DPI + RK L L ++ E ++E + Sbjct: 292 LTFRYGPHTMAGDDPTRYRTKDIENEW-EQKDPIVRFRKFLEAKGLWSQEVEETVIEEAK 350 Query: 334 MNVRKIINNSVEFAQSDKEP 353 ++++ I A++D+ P Sbjct: 351 EDIKQAI------AKADQAP 364 >gi|315426829|dbj|BAJ48450.1| pyruvate dehydrogenase E1 component subunit alpha [Candidatus Caldiarchaeum subterraneum] Length = 267 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 4/205 (1%) Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V + G A + KY++ ++ + FGDGA ++G +E+ N A ++ +++V NNQ Sbjct: 46 VAVHIPSAVGFALSLKYKKLSEVVINYFGDGATSKGDFHEALNFAGVFKAPIVFVCVNNQ 105 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ VSR +A + S + ++ G+ VDG D+ A KAV R +GP +IE Sbjct: 106 YAISVPVSRQTAVEHLSVKAAAYGFEGVSVDGNDVVACYLAAKKAVEKARRGEGPTLIEA 165 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHN-KWASEGDLKEIEMNVR 337 +TYR H+ + DP+ YR +E+ EM DPI ++R LL W+ E D K + Sbjct: 166 VTYRIGPHTTADDPSRYRDDKEV-EMWRRRDPITRLRSHLLRRGLWSMEEDEK-LWRTTE 223 Query: 338 KIINNSVEFAQSDKEPDPAELYSDI 362 + I ++E + ++ P + D+ Sbjct: 224 QTIQKTIEECEKNRPLPPESILEDV 248 >gi|330686023|gb|EGG97646.1| 2-oxoisovalerate dehydrogenase subunit alpha [Staphylococcus epidermidis VCU121] Length = 312 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 87/308 (28%), Positives = 139/308 (45%), Gaps = 3/308 (0%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 ++ + +E + Y+ M L R+ +E+ L G + F GQEA +GM ++ + Sbjct: 4 YKSAGLTEEDLKNMYKWMDLGRKLDERLWLLNRAGKIP-FVVSGQGQEATQIGMAYAMEQ 62 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIV 160 GD YR+ + G+ M G++ I S GK H + G V Sbjct: 63 GDISSPYYRDLAFVTYMGMTPLDTMLASFGKRDDINSGGKQMPSHYSHREKGILSQSSPV 122 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q+ G A A K + I G+G++NQG +E N A + L + VI NN+Y Sbjct: 123 ATQIPHSVGAALALKMDKKPNIATATVGEGSSNQGDFHEGLNFAGVHQLPFVCVIINNKY 182 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ S A N S R + + + G+QVDG D A+ M ++ +G +IE + Sbjct: 183 AISVPDSLQYAAKNLSDRAIGYGMEGVQVDGNDPIAMYKAMKESRDRALNGEGATLIEAI 242 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 T R HS D YRT+EE + ++ I + + LL + L EIE + II Sbjct: 243 TTRMTAHSSDDDDKYRTQEERDGLKEADCNI-RFKNHLLDLGIIDDAWLSEIEQEHKDII 301 Query: 341 NNSVEFAQ 348 N++ + A+ Sbjct: 302 NHATKAAE 309 >gi|308190218|ref|YP_003923149.1| pyruvate dehydrogenase (acetyl-transferring) [Mycoplasma fermentans JER] gi|319777551|ref|YP_004137202.1| pyruvate dehydrogenase e1-alpha subunit [Mycoplasma fermentans M64] gi|307624960|gb|ADN69265.1| pyruvate dehydrogenase (acetyl-transferring) [Mycoplasma fermentans JER] gi|318038626|gb|ADV34825.1| Pyruvate dehydrogenase E1-alpha subunit [Mycoplasma fermentans M64] Length = 369 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 73/299 (24%), Positives = 145/299 (48%), Gaps = 12/299 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L AY+ M+L R+ + QL G + F +G+EA+ + M++ + D + A+R + Sbjct: 45 LEAYKWMVLSRQQDTYMLQLQRQGRMLTFPP-NLGEEALQIATAMAMEKKDWFVPAFRSN 103 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 +L GV ++ G++ G + K ++ + ++ Q+S GIA+ Sbjct: 104 AAMLRLGVPMIDLIRYWNGQEWGCNHPKDVNVMPVNI---------VIATQISQCAGIAY 154 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K ++ + + G+G +G+ E NIA + ++ + NNQ+A+ T S S Sbjct: 155 AQKQLKTGGVAISFIGNGGTTEGEFSEGVNIATVQEWPAVFCVNNNQWAISTPNSEESRS 214 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 + + +F G++VDG D+ A + +A+ Y R P+I+E LT+R H+ SD Sbjct: 215 ATIAAKAHAFGCAGVRVDGNDLLASYEVIKEAIDYARKESKPVIVEFLTWRQGPHTTSDN 274 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 P YR+ ++ E +P+ ++ + + K +E + ++I + + + + E + D Sbjct: 275 PKLYRSEKDEKE-NEKWEPMHRIERYMKDKKIITEKEKEKIWADALEQVKKTYEESLKD 332 >gi|297196578|ref|ZP_06913976.1| pyruvate dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] gi|262398718|emb|CBH31046.1| putative pyruvate-dehydrogenase E1 component, alpha subunit [Streptomyces pristinaespiralis] gi|297153292|gb|EDY67102.2| pyruvate dehydrogenase [Streptomyces pristinaespiralis ATCC 25486] gi|302607732|emb|CBW45645.1| pyruvate dehydrogenase E1 component alpha-subunit [Streptomyces pristinaespiralis] Length = 352 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 81/311 (26%), Positives = 139/311 (44%), Gaps = 12/311 (3%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ YR M+ R F+ +A G + + GQEA ++L D + YRE Sbjct: 26 LALYRAMVTGRAFDRQATAFTRQGRLAVYPS-SHGQEACQTASVLALRPTDWLFPTYRES 84 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 +L G+D +++ G + G H T + Q G+A Sbjct: 85 VALLTRGIDPVEVLTLFRG-----DRHCGYDPHAHRTAPQCTP----LATQCLHAAGLAD 135 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + R D + + GDGA ++G +E+ N AA+ V+++I+NNQYA+ +++ +A Sbjct: 136 AARMRGHDTVALAYIGDGATSEGDFHEAVNYAAVRRAPVVFLIQNNQYAISVPLAKQTAA 195 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSD 291 + + + G+++DG D AV + +A R GP ++E LTYR H+ D Sbjct: 196 RTLADKAAGYGAAGVRIDGNDAAAVHTAVARAAHRARTGGGPTVVEALTYRIEAHTNADD 255 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 YR+ EE+ ++ DP+ ++ RLL + E L I + + S Sbjct: 256 DTRYRSAEEVAAW-ADKDPVARLEHRLLADGVLDEDTLAGITREAQDLTARLRRTFASPP 314 Query: 352 EPDPAELYSDI 362 DPAE++ + Sbjct: 315 RRDPAEMFQHV 325 >gi|115351176|ref|YP_773015.1| 3-methyl-2-oxobutanoate dehydrogenase [Burkholderia ambifaria AMMD] gi|115281164|gb|ABI86681.1| branched-chain alpha-keto acid dehydrogenase E1 component [Burkholderia ambifaria AMMD] Length = 410 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 146/330 (44%), Gaps = 10/330 (3%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G + + + ++ R ML R F+ + + F + +G+EA+ M+L Sbjct: 66 GPWAPDLDDARLIAGMRAMLKTRIFDARMMIAQRQKKIS-FYMVSLGEEAIGAAHAMALR 124 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 GD YR+ ++A V +++ +L +G KG+ + + GF+ G + Sbjct: 125 HGDMCFPTYRQQSILIARDVPLERMICQLMSNEGDPLKGRQLPVMYSDREAGFFSISGNL 184 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q G A A+ + KI GDGA + + + A ++ V+ + NNQ+ Sbjct: 185 ATQFIQAVGWAMASAIKGDTKIASAWIGDGATAEADFHTALTFAHVYRAPVVLNVVNNQW 244 Query: 221 AMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 A+ T + A + T F+ RGV I ++VDG D A+ A A R + GP +IE Sbjct: 245 AISTFQAIAGGEGTTFAGRGVGCGIASLRVDGNDFLAIYAASTWAAERARRNLGPTLIEW 304 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-W---ASEGDLKEIEM 334 +TYR HS S DP YR ++ DPI + ++ L+ W A + E+E Sbjct: 305 VTYRAGAHSTSDDPTKYRPADDWAHFPLG-DPIARFKQHLIAKGIWSDSAHDALTAELEA 363 Query: 335 NVRKIINNSVEFAQ--SDKEPDPAELYSDI 362 V + +F D+ P PA ++ D+ Sbjct: 364 EVIAAQKEAEQFGTLVDDRIPSPASMFDDV 393 >gi|255292432|dbj|BAH89550.1| 2-oxoisovalerate dehydrogenase, alpha subunit [uncultured bacterium] Length = 411 Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 80/286 (27%), Positives = 131/286 (45%), Gaps = 5/286 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +++ +++ L R ML +R +++ G F C G+EA+ G + L +GD Sbjct: 70 IADMDRDALLLGLRDMLRMRAVDKRLLNAQRQGKTS-FYLQCTGEEAIGCGFQRQLEKGD 128 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 YR+ ++A +M ++ + +G+ + S GF+ G +G Q Sbjct: 129 MNFPTYRQQTLLIAADYPLKDLMGQIYSNECDPLEGRQLPIMHSSRDYGFFSISGNLGTQ 188 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A AN KI GDGA + + A+++ VI I NNQ+A+ Sbjct: 189 YIQAVGWAMANALSGDGKIAAGWIGDGATASNDFHSALLSASVYRPPVILNIVNNQWAIS 248 Query: 224 TSVSRASAQT-NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T A+ + ++ R + IP ++VDG D AV A A+ R GP+ IE TY Sbjct: 249 TYTGVATGGSRTYAARARGYGIPALRVDGNDYLAVTAVSKWAIDRARKGFGPVAIEWFTY 308 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASE 326 R HS S DP+ YR ++E DP+E++++ L L W+ E Sbjct: 309 RVAAHSTSDDPSAYRPKDEAGAWPLG-DPLERLKQHLILRGDWSEE 353 >gi|313110861|ref|ZP_07796707.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Pseudomonas aeruginosa 39016] gi|310883209|gb|EFQ41803.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Pseudomonas aeruginosa 39016] Length = 410 Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 86/312 (27%), Positives = 141/312 (45%), Gaps = 10/312 (3%) Query: 16 ALNPSVSAKRAATSSVDCVDIPFLE--GFEVSEFNK----EQELSAYRLMLLIRRFEEKA 69 A P V + AATS + + L+ G V +N EQ L R ML R F+ + Sbjct: 35 ARKPPVDVEPAATSDLAYSLVRVLDDDGHAVGPWNPQLSNEQLLRGMRAMLKTRLFDARM 94 Query: 70 GQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAEL 129 + F C+G+EA+ ++L +GD YR+ G ++ ++ +L Sbjct: 95 LTAQRQKKLS-FYMQCLGEEAIATAHTLALRDGDMCFPTYRQQGILITREYPLVDMICQL 153 Query: 130 TGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGD 189 + KG+ + S + GF+ G + Q G A+ + +I GD Sbjct: 154 LSNEADPLKGRQLPIMYSSKEAGFFSISGNLATQFIQAVGWGMASAIKGDTRIASAWIGD 213 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQ 248 GA + + + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++ Sbjct: 214 GATAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGTTFANRGVGCGIASLR 273 Query: 249 VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSN 307 VDG D AV A + A R + GP +IE +TYR HS S DP+ YR ++ Sbjct: 274 VDGNDFLAVYAASEWAAERARRNLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWTNFPLG 333 Query: 308 HDPIEQVRKRLL 319 DPI ++++ ++ Sbjct: 334 -DPIARLKRHMI 344 >gi|212531477|ref|XP_002145895.1| 2-oxoisovalerate dehydrogenase complex alpha subunit, putative [Penicillium marneffei ATCC 18224] gi|210071259|gb|EEA25348.1| 2-oxoisovalerate dehydrogenase complex alpha subunit, putative [Penicillium marneffei ATCC 18224] Length = 449 Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 23/335 (6%) Query: 43 EVSEFNKEQELSAYRLMLLIR-----RFE-EKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 E S+ + E+ ++ Y+ ML + FE ++ G+L F + G+E + VG Sbjct: 85 EPSDVSTEEVITWYKNMLTVNVMDVIMFEAQRQGRL-------SFYMVSAGEEGIAVGSA 137 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 +L + D + YRE G G + MA+L + +G+ +H + Sbjct: 138 SALQDHDVVFCQYREAGVFQQRGFTMKQFMAQLFANKHDSGRGRNMPVHYGLEYPRIFTI 197 Query: 157 HGIVGAQVSLGTGIAFANKYR-----RSDKICVVC-FGDGAANQGQVYESFNIAALWNLN 210 + Q+ TG A+A K + + V C FG+GAA++G + + N+AA + Sbjct: 198 SSPLATQLPQATGAAYALKIQALQNPNTPAGVVACYFGEGAASEGDFHAALNMAATRSCP 257 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 V+++ NN +A+ T + RG+ + I ++VDG DI AV+ +A Sbjct: 258 VVFICRNNGFAISTPTLEQYRGDGIASRGIGYGIDTIRVDGNDIFAVREATKEARRMALE 317 Query: 271 HKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 + G PI+IE ++YR HS SD + YR R E+ + + +PI ++RK L NK A + Sbjct: 318 NGGRPILIEAMSYRVSHHSTSDDSFTYRARVEVEDWKRRDNPIIRLRK-WLENKGAWNEE 376 Query: 329 L-KEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 L ++ ++R I A+ DK+P +++ D+ Sbjct: 377 LEQQTRADLRAAILKEFNAAERDKKPPLKDMFVDV 411 >gi|240277989|gb|EER41496.1| 2-oxoisovalerate dehydrogenase [Ajellomyces capsulatus H143] gi|325096050|gb|EGC49360.1| 2-oxoisovalerate dehydrogenase [Ajellomyces capsulatus H88] Length = 450 Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 8/291 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + VG +LT D + YRE G G M++L + KG+ Sbjct: 123 FYMVSAGEEGIAVGSAAALTPEDIVFAQYRETGVFQQRGFTLKDFMSQLFANRNDPGKGR 182 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQ 194 +H +K + + Q+ G A+A K + +I FG+GAA++ Sbjct: 183 NMPVHYGGSKVNTHTISSPLATQIPHAAGAAYALKLQSLQNPNIPQRIVTCYFGEGAASE 242 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + V+++ NN YA+ T + RG+ + I ++VDG DI Sbjct: 243 GDFHAALNIAATRSCPVVFICRNNGYAISTPTLEQYRGDGIASRGIGYGIDTIRVDGNDI 302 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV +A + G P++IE ++YR HS SD + YR R E+ + + +PI Sbjct: 303 FAVHEVTREARRMALENGGRPVLIEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIT 362 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++RK + ++ ++ +RK + A+ +K+P E+++D+ Sbjct: 363 RLRKWMEGEGIWNDDLERDTRDELRKAVLQEFSAAEKEKKPPLREMFNDVF 413 >gi|154274610|ref|XP_001538156.1| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor [Ajellomyces capsulatus NAm1] gi|150414596|gb|EDN09958.1| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor [Ajellomyces capsulatus NAm1] Length = 450 Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 8/291 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + VG +LT D + YRE G G M++L + KG+ Sbjct: 123 FYMVSAGEEGIAVGSAAALTPEDIVFAQYRETGVFQQRGFTLKDFMSQLFANRNDPGKGR 182 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQ 194 +H +K + + Q+ G A+A K + +I FG+GAA++ Sbjct: 183 NMPVHYGGSKVNTHTISSPLATQIPHAAGAAYALKLQSLQNPNIPQRIVTCYFGEGAASE 242 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + V+++ NN YA+ T + RG+ + I ++VDG DI Sbjct: 243 GDFHAALNIAATRSCPVVFICRNNGYAISTPTLEQYRGDGIASRGIGYGIDTIRVDGNDI 302 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV +A + G P++IE ++YR HS SD + YR R E+ + + +PI Sbjct: 303 FAVHEVTREARRMALENGGRPVLIEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIT 362 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++RK + ++ ++ +RK + A+ +K+P E+++D+ Sbjct: 363 RLRKWMEGEGIWNDDLERDTRDELRKAVLQEFSAAEKEKKPPLREMFNDVF 413 >gi|326693872|ref|ZP_08230877.1| pyruvate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Leuconostoc argentinum KCTC 3773] Length = 378 Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 82/313 (26%), Positives = 142/313 (45%), Gaps = 17/313 (5%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G ++ + E + + MLL R+ + ++ +L G G F GQEA + + Sbjct: 42 GLARADLSSEDLVQIMQRMLLSRQLDIRSTKLAKQGRFGFFAPTA-GQEASQMASSYAFN 100 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN----GFYGG 156 + D ++ YR+ I+ G K + G G ++F+T + + Sbjct: 101 DSDWLMPGYRDIPQIIVKGWPIWKAILWSRGHVLG---------NVFTTSDDQPVNAWMP 151 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 I+GAQ GI K R+ D + GDG ++QG YE N A + N ++ I+ Sbjct: 152 QIIIGAQYVEAAGIGLGLKKRQKDAVAYAYTGDGGSSQGDFYEGVNFAGAYQANAVFFIQ 211 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN YA+ T +A T+ + +G + +P + VDG D AV +A + + GP++ Sbjct: 212 NNGYAISTPRGLQTAATHLAAKGWAAGVPSVVVDGNDPIAVYLAAKEARQWAVSGNGPVL 271 Query: 277 IEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 IE LT R HS + DP YRT+++I+ + +P+ ++RK + E Sbjct: 272 IETLTDRLEPHSTAGDDPLRYRTQDDIDAWWA-KEPLIRMRKFMTEQGIWDEAKEDAYIA 330 Query: 335 NVRKIINNSVEFA 347 V +I+ ++ A Sbjct: 331 EVNAVIDEQIKIA 343 >gi|225557347|gb|EEH05633.1| 2-oxoisovalerate dehydrogenase alpha subunit [Ajellomyces capsulatus G186AR] Length = 450 Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 8/291 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + VG +LT D + YRE G G M++L + KG+ Sbjct: 123 FYMVSAGEEGIAVGSAAALTPEDIVFAQYRETGVFQQRGFTLKDFMSQLFANRNDPGKGR 182 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQ 194 +H +K + + Q+ G A+A K + +I FG+GAA++ Sbjct: 183 NMPVHYGGSKVNTHTISSPLATQIPHAAGAAYALKLQSLQNPNIPQRIVTCYFGEGAASE 242 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA + V+++ NN YA+ T + RG+ + I ++VDG DI Sbjct: 243 GDFHAALNIAATRSCPVVFICRNNGYAISTPTLEQYRGDGIASRGIGYGIDTIRVDGNDI 302 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV +A + G P++IE ++YR HS SD + YR R E+ + + +PI Sbjct: 303 FAVHEVTREARRMALENGGRPVLIEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIT 362 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++RK + ++ ++ +RK + A+ +K+P E+++D+ Sbjct: 363 RLRKWMEGEGIWNDDLERDTRDELRKAVLQEFSAAEKEKKPPLREMFNDVF 413 >gi|270289979|ref|ZP_06196205.1| pyruvate dehydrogenase E1 component subunit alpha [Pediococcus acidilactici 7_4] gi|304385766|ref|ZP_07368110.1| pyruvate dehydrogenase complex E1 component alpha subunit [Pediococcus acidilactici DSM 20284] gi|270281516|gb|EFA27348.1| pyruvate dehydrogenase E1 component subunit alpha [Pediococcus acidilactici 7_4] gi|304328270|gb|EFL95492.1| pyruvate dehydrogenase complex E1 component alpha subunit [Pediococcus acidilactici DSM 20284] Length = 372 Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 83/303 (27%), Positives = 136/303 (44%), Gaps = 18/303 (5%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + +Q + + M+ R E++ +L G +G F IG+EA + + +GD + Sbjct: 47 LSDDQMVELMKQMVFSRILHERSSKLSKQGRLG-FYAPTIGEEASQIASNYAFEKGDWLF 105 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ ++ G K G G + F NG++ I+GAQ Sbjct: 106 PGYRDIPQLIMKGWPIYKAFLWSRGHFEG---------NEFEDVNGWFP-QIIIGAQYVE 155 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A K R + GDG +QG YE N A ++ ++ +NN YA+ T Sbjct: 156 AAGAALGLKKRNKPNVAYAYTGDGGTSQGDFYEGMNFAGAYHAPAVFFAQNNGYAISTPR 215 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S + + + +G + +P VDGMD A+ +A + GP+ IE +T R Sbjct: 216 SVQTKAPHLAAKGWAAGLPSFVVDGMDPIAMYLAAKEARKWAVDGNGPVFIETITNRLGP 275 Query: 287 HSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HSMS DP YRT+E+I+ + +P+ + RK L SE +IE + I+N+ + Sbjct: 276 HSMSGDDPLRYRTQEDIDNW-TKREPLIRFRKYLTDRDLWSE----DIENDWADIVNSQI 330 Query: 345 EFA 347 + A Sbjct: 331 DDA 333 >gi|156539549|ref|XP_001599954.1| PREDICTED: similar to pyruvate dehydrogenase [Nasonia vitripennis] Length = 189 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 63/117 (53%), Positives = 76/117 (64%), Gaps = 2/117 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 K L Y+ + +RR E AG LY +V GFCHL GQEA VGM +L D +IT Sbjct: 70 TKADALKYYKQLHTVRRMETAAGNLYKEKIVRGFCHLYSGQEACAVGMVAALRPQDSVIT 129 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 AYR HG GV ++AELTGRQ G ++GKGGSMHM++ KN FYGG+GIVGAQV Sbjct: 130 AYRAHGWTYLMGVTPLGVLAELTGRQSGNARGKGGSMHMYA-KN-FYGGNGIVGAQV 184 >gi|170016782|ref|YP_001727701.1| pyruvate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Leuconostoc citreum KM20] gi|169803639|gb|ACA82257.1| Pyruvate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Leuconostoc citreum KM20] Length = 378 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/280 (27%), Positives = 133/280 (47%), Gaps = 17/280 (6%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E + + ++ + MLL R+ + ++ +L G G F GQEA + + + D Sbjct: 46 AELDDDDLINIMKRMLLSRQLDIRSTKLAKQGRFGFFAPTA-GQEASQMASSYAFNDDDW 104 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN----GFYGGHGIV 160 ++ YR+ I+ G K + G G ++F+T + + I+ Sbjct: 105 LMPGYRDIPQIIVKGWPIWKAILWSRGHVLG---------NVFTTADDKPVNSWMPQIII 155 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQ GIA K R+ D + GDG +QG YE N A + N ++ ++NN Y Sbjct: 156 GAQYVEAAGIALGLKKRQKDAVVYAYTGDGGTSQGDFYEGINFAGAYQANAVFFVQNNGY 215 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+ T +A + + +G + IP + VDG D A+ +A + + KGP++IE + Sbjct: 216 AISTPRRLQTAAKHLAAKGWAAGIPSLVVDGNDPIAMYLAAKEARTWATSGKGPVLIEAI 275 Query: 281 TYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 T R HS + DP YRT+++I+ +P+ ++RK + Sbjct: 276 TDRLEPHSTAGDDPLRYRTQDDIDAWW-QKEPLIRMRKYI 314 >gi|254293976|ref|YP_003059999.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Hirschia baltica ATCC 49814] gi|254042507|gb|ACT59302.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Hirschia baltica ATCC 49814] Length = 410 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/248 (30%), Positives = 117/248 (47%), Gaps = 6/248 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F C G+EA+ + L GD YR+ ++A G + + + G+ Sbjct: 105 FYLQCTGEEAIGCAFQKQLHPGDMNFPTYRQQSLLVASGYPLKSLFGQYYQNENDPLSGR 164 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 + GF+ G +G Q G A A +D I GDGA + + Sbjct: 165 QLPTLHSAKDYGFFTISGNLGTQYVQAVGWAMAAALTGTDNISAAWIGDGATASNDYHSA 224 Query: 201 FNIAALWNLNVIYVIENNQYAMGT--SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 AA++ VI + NNQ+A+ + ++ SA T F+ RGV + IP ++VDG D AV Sbjct: 225 MVTAAVYKPPVILNVVNNQWAISSFSGIAGGSAST-FASRGVGYGIPSIRVDGNDFLAVM 283 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKR 317 A A R GP++IE +TYR HS SD A+ YR +EE E DP+E++++ Sbjct: 284 AATKWATKRTRGGFGPVVIEWVTYRVAAHSTSDDASAYRPKEEA-EAWPLGDPVERLKQH 342 Query: 318 LLHN-KWA 324 L++ KW+ Sbjct: 343 LINRGKWS 350 >gi|238810086|dbj|BAH69876.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 371 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/299 (24%), Positives = 144/299 (48%), Gaps = 12/299 (4%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L AY+ M+L R+ + QL G + F +G+EA+ + M++ D + A+R + Sbjct: 47 LEAYKWMVLSRQQDTYMLQLQRQGRMLTFPP-NLGEEALQIATAMAMENKDWFVPAFRSN 105 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 +L GV ++ G++ G + K ++ + ++ Q+S GIA+ Sbjct: 106 AAMLRLGVPMIDLIRYWNGQEWGCNHPKDVNVMPVNI---------VIATQISQCAGIAY 156 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K ++ + + G+G +G+ E NIA + ++ + NNQ+A+ T S S Sbjct: 157 AQKQLKTGGVAISFIGNGGTTEGEFSEGVNIATVQEWPAVFCVNNNQWAISTPNSEESRS 216 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 + + +F G++VDG D+ A + +A+ Y R P+I+E LT+R H+ SD Sbjct: 217 ATIAAKAHAFGCAGVRVDGNDLLASYEVIKEAIDYARKESKPVIVEFLTWRQGPHTTSDN 276 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 P YR+ ++ E +P+ ++ + + K +E + ++I + + + + E + D Sbjct: 277 PKLYRSEKDEKE-NEKWEPMHRIERYMKDKKIITEKEKEKIWADALEQVKKTYEESLKD 334 >gi|227512179|ref|ZP_03942228.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus buchneri ATCC 11577] gi|227084573|gb|EEI19885.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus buchneri ATCC 11577] Length = 400 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 88/323 (27%), Positives = 147/323 (45%), Gaps = 23/323 (7%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F+ ++ ++ M+ R E+ G +G F +G+EA +G+ ++ + D + Sbjct: 71 FSDDELVTLMEKMVWERALHEQTMNFSRQGRLG-FYAPTLGEEASEMGIAHAMKKQDYLF 129 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 AYR+ ++ G T ++G + SKG + I+GAQ Sbjct: 130 PAYRDLPQLIQHGA---------TVKEGFLWSKGHYQCYDYVRRGVRAWIPQIIIGAQYV 180 Query: 166 LGTGIAFA-NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G A K D + V GDG +QG YE N A+ + ++ ++NN +A+ Sbjct: 181 QCAGAALGIKKNDEKDTVAYVFTGDGGTSQGDFYEGINFASSFQAPAVFFVQNNGWAISV 240 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +A +++GV+ +PG+QVDGMDI A A + A GP ++E LTYR+ Sbjct: 241 PRKTQTAAETLAQKGVASGVPGVQVDGMDILATYLVAKDARDFAAAGNGPALVETLTYRF 300 Query: 285 RGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 HS + DP+ YRT+EE + + DP+ ++RK L K L + + + + Sbjct: 301 GAHSSAGDDPSRYRTKEE-EKPWFDRDPLIRLRKVLTDKK------LWDQDKEDKLVAQY 353 Query: 343 SVEFAQS--DKEPDPAELYSDIL 363 +F Q D E P + SD L Sbjct: 354 KDQFKQDMKDAEAAPKQKVSDFL 376 >gi|145495258|ref|XP_001433622.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124400741|emb|CAK66225.1| unnamed protein product [Paramecium tetraurelia] Length = 177 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/129 (47%), Positives = 79/129 (61%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ Y+ M L RR E LY ++ GF HL GQE++ G+ LT D +ITAYR+H Sbjct: 42 LAYYKSMQLQRRMEIACDNLYKQRLIRGFLHLADGQESIYEGLHAGLTFDDCVITAYRDH 101 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L G +I+AE+ +Q G +KGKGGSMH + FYGGHGIVGAQ+ LGTG+AF Sbjct: 102 CIALLRGDTPHQIIAEMMAKQTGSTKGKGGSMHYYKKATNFYGGHGIVGAQIPLGTGLAF 161 Query: 173 ANKYRRSDK 181 A K + K Sbjct: 162 AQKVSQKAK 170 >gi|147902585|ref|NP_001090683.1| branched chain keto acid dehydrogenase E1, alpha polypeptide [Xenopus (Silurana) tropicalis] gi|117558555|gb|AAI27358.1| LOC100036656 protein [Xenopus (Silurana) tropicalis] Length = 291 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/251 (28%), Positives = 115/251 (45%), Gaps = 1/251 (0%) Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G ++ G MA+ G KGK +H F + Q+ G A+ Sbjct: 8 GVLMYRGYPLDLFMAQCYGNASDPGKGKQMPVHYGCKDLNFVTISSPLATQIPQAVGAAY 67 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 + K +D+ + FG+GAA++G + +FN +A V++ NN YA+ T S Sbjct: 68 SFKRENADRAVICYFGEGAASEGDAHAAFNFSATLECPVLFFCRNNGYAISTPTSEQYRG 127 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + RG + I ++VDG D+ AV +A A P +IE +TYR HS SD Sbjct: 128 DGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDD 187 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 ++ YR+ +E+N PI ++R +LH W E K RK++ + E A+ Sbjct: 188 SSAYRSVDEVNYWDKQDHPISRLRHYMLHKGWWDEEQEKIWRKKSRKMVMEAFEEAERKH 247 Query: 352 EPDPAELYSDI 362 +P ++SD+ Sbjct: 248 KPKVEHMFSDV 258 >gi|145591408|ref|YP_001153410.1| pyruvate dehydrogenase (acetyl-transferring) [Pyrobaculum arsenaticum DSM 13514] gi|145283176|gb|ABP50758.1| Pyruvate dehydrogenase (acetyl-transferring) [Pyrobaculum arsenaticum DSM 13514] Length = 370 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 92/309 (29%), Positives = 139/309 (44%), Gaps = 10/309 (3%) Query: 12 DIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQEL-SAYRLMLLIRRFEEKAG 70 +I N +S K V D E E+ E EL YR M+ R + A Sbjct: 3 EIDFNQNYKISVKEPQVLRVIEPDGTLREEAELGYKPSEGELVKLYRYMVTARVLDRHAL 62 Query: 71 QLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELT 130 L+ MG V G EA G L D + YR +L GV I A+ Sbjct: 63 LLHRMGKVKSTYGPHEGHEAADAGTVHVLKPEDWIAPYYRMLTALLIRGVPLQTIWAKFF 122 Query: 131 GRQGGISKGKGGSMHM--FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFG 188 +QG KG+ ++ F+ G I G Q G A+A +Y + D+I G Sbjct: 123 AKQGDPDKGRNLTVEWGGFAKWRILSVGAPI-GHQYIYAAGFAYALRYMKRDEIVAAYIG 181 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ 248 DG + + N A ++ L V++ + NNQYA+ V +A T + + ++ I G+ Sbjct: 182 DGGTSTNGFHTGLNFAGVFKLPVVFYVYNNQYAISVPVRSQTAVTRLAIKAAAYGIEGIA 241 Query: 249 VDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMS-DPAN-YRTREEINEMR 305 DGMD+ AV AV+ +A +G P+++E++TYR+ H+ + DPA YR E E R Sbjct: 242 TDGMDLLAVLKAAHYAVS--KARRGEPVLVELITYRFGPHTTADDPATRYRDPAEAEEWR 299 Query: 306 SNHDPIEQV 314 +DPI ++ Sbjct: 300 -RYDPIARL 307 >gi|167536618|ref|XP_001749980.1| hypothetical protein [Monosiga brevicollis MX1] gi|163771490|gb|EDQ85155.1| predicted protein [Monosiga brevicollis MX1] Length = 426 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 82/320 (25%), Positives = 147/320 (45%), Gaps = 5/320 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 SE +++ L Y+LM + ++ G + F G+E +G +L D Sbjct: 77 SEISQQNILDWYKLMNTTNQMDQLLYNAQRQGRIS-FYMTAYGEEGTHLGSAAALDPEDV 135 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YRE G ++ G +M + G + +G+ +H S ++ F+ + Q+ Sbjct: 136 VYAQYREVGVLMYRGFSLKNVMDQCYSNSGDLGRGRQMPVHYGSAEHNFHTISSPLATQL 195 Query: 165 SLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A+A K R + CV+C FGDG+A++G + N +A + VIY NN YA+ Sbjct: 196 PQAAGAAYALK-TRGKRNCVICYFGDGSASEGDSSVALNFSATLDCPVIYFCRNNGYAIS 254 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T R F + ++VDG D+ AV + A A + P++IE +TYR Sbjct: 255 TPTKDQYRGDGIVSRAAGFGLDYIRVDGNDVFAVYNAVKIARERTIAEQRPVLIEAMTYR 314 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 HS SD ++ YR +E++ S PI ++ + + + + E E++ +RK + Sbjct: 315 IGHHSTSDDSSAYRGMDEVDTF-SQDTPISRLERYMTNQGFWDEEKEAELQKTIRKEVRK 373 Query: 343 SVEFAQSDKEPDPAELYSDI 362 A++ +P ++ D+ Sbjct: 374 EFADAEARLKPSMRHMFEDV 393 >gi|332716274|ref|YP_004443740.1| 2-oxoisovalerate dehydrogenase subunit alpha [Agrobacterium sp. H13-3] gi|325062959|gb|ADY66649.1| 2-oxoisovalerate dehydrogenase alpha subunit [Agrobacterium sp. H13-3] Length = 412 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E L + M+ +R F+ + G F +G+EAV + +L++GD Sbjct: 74 LSDEDLLVGLKNMMRLRAFDARMLMAQRQGKTS-FYMQHLGEEAVSCAFRKALSKGDMNF 132 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + G+ + S ++GF+ G + Q Sbjct: 133 PTYRQAGLLIADDYPLVTMMNQIYSNELDPLHGRQLPVLYSSKEHGFFTVSGNLATQYVQ 192 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ + KI GDG+ + + + A+ + VI I NNQ+A+ T Sbjct: 193 AVGWAMASAIKGDTKIAAAWIGDGSTAESDFHSALVFASTYKAPVILNIVNNQWAISTFQ 252 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG+ F IP ++VDG D AV A AV R + GP +IE +TYR Sbjct: 253 GIARGGSGT-FAARGLGFGIPALRVDGNDYLAVYAVARWAVERARRNLGPTLIEYVTYRV 311 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASE 326 HS S DP+ YR + E +E DP+ +++K L L W+ E Sbjct: 312 GAHSTSDDPSAYRPKTE-SEAWPLGDPVLRLKKHLILRGVWSEE 354 >gi|227509424|ref|ZP_03939473.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227524091|ref|ZP_03954140.1| pyruvate dehydrogenase, acetyl-transferring [Lactobacillus hilgardii ATCC 8290] gi|227088722|gb|EEI24034.1| pyruvate dehydrogenase, acetyl-transferring [Lactobacillus hilgardii ATCC 8290] gi|227191136|gb|EEI71203.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 400 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 88/323 (27%), Positives = 147/323 (45%), Gaps = 23/323 (7%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F+ ++ ++ M+ R E+ G +G F +G+EA +G+ ++ + D + Sbjct: 71 FSDDELVTLMEKMVWERALHEQTMNFSRQGRLG-FYAPTLGEEASEMGIAHAMKKQDYLF 129 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 AYR+ ++ G T ++G + SKG + I+GAQ Sbjct: 130 PAYRDLPQLIQHGA---------TVKEGFLWSKGHYQCYDYVRRGVRAWIPQIIIGAQYV 180 Query: 166 LGTGIAFA-NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G A K D + V GDG +QG YE N A+ + ++ ++NN +A+ Sbjct: 181 QCAGAALGIKKNDEKDTVAYVFTGDGGTSQGDFYEGINFASSFQAPAVFFVQNNGWAISV 240 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +A +++GV+ +PG+QVDGMDI A A + A GP ++E LTYR+ Sbjct: 241 PRKTQTAAETLAQKGVASGVPGVQVDGMDILATYLVAKDARDFAAAGNGPALVETLTYRF 300 Query: 285 RGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 HS + DP+ YRT+EE + + DP+ ++RK L K L + + + + Sbjct: 301 GAHSSAGDDPSRYRTKEE-EKPWFDRDPLIRLRKVLTDKK------LWDQDKEDKLVAQY 353 Query: 343 SVEFAQS--DKEPDPAELYSDIL 363 +F Q D E P + SD L Sbjct: 354 KDQFKQDMKDAEAAPKQKVSDFL 376 >gi|145241874|ref|XP_001393583.1| 2-oxoisovalerate dehydrogenase subunit alpha [Aspergillus niger CBS 513.88] gi|134078125|emb|CAK40206.1| unnamed protein product [Aspergillus niger] Length = 444 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 92/321 (28%), Positives = 149/321 (46%), Gaps = 23/321 (7%) Query: 49 KEQELSAYRLMLLIR-----RFE-EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 KE+ L+ Y+ ML + FE ++ G+L F + G+E + VG +LT Sbjct: 85 KEEILAWYKNMLTVSVMDVIMFEAQRQGRL-------SFYMVSAGEEGISVGSAAALTPD 137 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G G M++L + SKG+ +H + + Sbjct: 138 DVVFAQYREAGVFQQRGFTLKNFMSQLFANRFDNSKGRNMPVHYGCNYPRTHTISSPLAT 197 Query: 163 QVSLGTGIAFANKYRR------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 Q+ +G A+A K + +I FG+GAA++G + NIAA + V+++ Sbjct: 198 QIPQASGAAYALKLQSLQNPDTPARIVACYFGEGAASEGDFHAGLNIAATRSCPVVFICR 257 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN YA+ T + RGV + I ++VDG DI AV M +A G P+ Sbjct: 258 NNGYAISTPTLEQYRGDGIASRGVGYGIDTIRVDGNDIFAVYEAMREARRLALQDGGKPV 317 Query: 276 IIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 +IE ++YR HS SD + YR R E+ + + +PI ++RK L + SE +E Sbjct: 318 LIEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIIRLRKWLENEGHWSEDLERETRD 377 Query: 335 NVRKIINNSVEFAQSDKEPDP 355 +RK + EF ++++E P Sbjct: 378 KIRKEVLR--EFGEAEREKKP 396 >gi|159185754|ref|NP_357136.2| 2-oxoisovalerate dehydrogenase alpha subunit [Agrobacterium tumefaciens str. C58] gi|159140888|gb|AAK89921.2| 2-oxoisovalerate dehydrogenase alpha subunit [Agrobacterium tumefaciens str. C58] Length = 412 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E L + M+ +R F+ + G F +G+EAV + +L++GD Sbjct: 74 LSDEDLLVGLKNMMRLRAFDARMLMAQRQGKTS-FYMQHLGEEAVSCAFRKALSKGDMNF 132 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + G+ + S ++GF+ G + Q Sbjct: 133 PTYRQAGLLIADDYPLVTMMNQIYSNELDPLHGRQLPVLYSSKEHGFFTVSGNLATQYVQ 192 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ + KI GDG+ + + + A+ + VI I NNQ+A+ T Sbjct: 193 AVGWAMASAIKGDTKIAAAWIGDGSTAESDFHSALVFASTYKAPVILNIVNNQWAISTFQ 252 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG+ F IP ++VDG D AV A AV R + GP +IE +TYR Sbjct: 253 GIARGGSGT-FAARGLGFGIPALRVDGNDYLAVYAVARWAVERARRNLGPTLIEYVTYRV 311 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASE 326 HS S DP+ YR + E +E DP+ +++K L L W+ E Sbjct: 312 GAHSTSDDPSAYRPKTE-SEAWPLGDPVLRLKKHLILRGVWSEE 354 >gi|172060189|ref|YP_001807841.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Burkholderia ambifaria MC40-6] gi|171992706|gb|ACB63625.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Burkholderia ambifaria MC40-6] Length = 410 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 86/330 (26%), Positives = 146/330 (44%), Gaps = 10/330 (3%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G + + + ++ R ML R F+ + + F + +G+EA+ M+L Sbjct: 66 GPWAPDLDDARLIAGMRAMLKTRIFDARMMIAQRQKKIS-FYMVSLGEEAIGAAHAMALR 124 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 GD YR+ ++A V +++ +L +G KG+ + + GF+ G + Sbjct: 125 HGDMCFPTYRQQSILIARDVPLERMICQLMSNEGDPLKGRQLPVMYSDREAGFFSISGNL 184 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q G A A+ + KI GDGA + + + A ++ V+ + NNQ+ Sbjct: 185 ATQFIQAVGWAMASAIKGDTKIASAWIGDGATAEADFHTALTFAHVYRAPVVLNVVNNQW 244 Query: 221 AMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 A+ T + A + T F+ RGV I ++VDG D A+ A A R + GP +IE Sbjct: 245 AISTFQAIAGGEGTTFAGRGVGCGIASLRVDGNDFLAIYAASTWAAERARRNLGPTLIEW 304 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-W---ASEGDLKEIEM 334 +TYR HS S DP YR ++ DPI + ++ L+ W A + E+E Sbjct: 305 VTYRAGAHSTSDDPTKYRPADDWAHFPLG-DPIARFKQHLIAKGIWSDSAHDALTAELEA 363 Query: 335 NVRKIINNSVEFAQ--SDKEPDPAELYSDI 362 V + +F D+ P PA ++ D+ Sbjct: 364 EVIAAQKEAEKFGTLADDRIPSPASMFDDV 393 >gi|221486126|gb|EEE24396.1| 2-oxoisovalerate dehydrogenase, putative [Toxoplasma gondii GT1] Length = 571 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 86/315 (27%), Positives = 150/315 (47%), Gaps = 6/315 (1%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 +G++ N E L AY+ M+ + ++ + G + + G+EA+ + ++L Sbjct: 213 DGWQCPMTNDEV-LEAYQFMVKLSIWDNMFYSVQRQGRISFYIQ-NQGEEALQTAVGLAL 270 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 + D + YRE G ++ G A + +L R+G SKG+ + + Sbjct: 271 DKKDHLFCQYRELGVLMLHGFTAEDALEQLFARRGDESKGRQMPISYSKHSVNLHTICTP 330 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + QV G +A K D+I V FG+GAA++G + + N AA ++V NN Sbjct: 331 LTTQVPHAAGAGYAFKLAGDDRIAVAFFGEGAASEGDFHAAMNFAATLKSQTLFVCRNNG 390 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ T V A + RG+S+ + ++VDG D+ A KA + + P++IE Sbjct: 391 YAISTPVKDQYAGDGIAIRGISYGMHTIRVDGNDLFASLLATKKAREIIVSQRQPVLIEF 450 Query: 280 LTYRYRGHSMSDPA-NYRTREEINEM-RSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNV 336 +TYR HS SD + YR E+ +S PI +VR+ L + N W+ + D +E+ + Sbjct: 451 MTYRVGHHSTSDDSFQYRPSGELEAWGQSGIHPIARVRRYLDNLNLWSDKQD-EELRKDA 509 Query: 337 RKIINNSVEFAQSDK 351 R + ++ + DK Sbjct: 510 RATMLRMMKVVEKDK 524 >gi|91094507|ref|XP_971663.1| PREDICTED: similar to CG8199 CG8199-PA [Tribolium castaneum] gi|270000751|gb|EEZ97198.1| hypothetical protein TcasGA2_TC004386 [Tribolium castaneum] Length = 420 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 3/277 (1%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EA+ +G +L D + YRE G ++ G A + + + G + + KG+ +H Sbjct: 113 GEEAIHIGSAAALDLEDVIYGQYREAGVLVWRGFTAQQFVDQCYGNRDDLGKGRQMPVHY 172 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 + F + Q+ G A+A K + ++ V +GDGAA++G + +FN A Sbjct: 173 GAKHLNFVTISSPLSTQMPQAVGAAYALKGK--GRVVVCYYGDGAASEGDAHAAFNFGAT 230 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 VI NN YA+ T V + RG +F I ++VDG D+ AV A Sbjct: 231 LECPVILFCRNNGYAISTPVKDQYRGDGVAARGPAFGIHTLRVDGNDVFAVYNATKLAKK 290 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 YC P+++E + YR HS SD + YR+++E+++ + +P +++ L+ S Sbjct: 291 YCLEESKPVVVEAMAYRLGHHSTSDDSTAYRSQDEVDQWATTDNPATKMKIYLMKKGLWS 350 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 E + K+ R+ + + + +P+ E + D+ Sbjct: 351 EDEEKKFLKEKREEVMTAFTAGEKKPKPNWNECFKDV 387 >gi|299534601|ref|ZP_07047933.1| pyruvate dehydrogenase E1 component, alpha subunit [Lysinibacillus fusiformis ZC1] gi|298729974|gb|EFI70517.1| pyruvate dehydrogenase E1 component, alpha subunit [Lysinibacillus fusiformis ZC1] Length = 371 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 13/262 (4%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + +L + D ++ YR+ I+ Sbjct: 55 MVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASHFALEQEDWILPGYRDVPQIVWH 113 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ K G G +G ++ I+GAQ G+A K R Sbjct: 114 GLPLEKAFLFSRGHFMGNQVPEGVNV---------LAPQIIIGAQYIQAAGVALGIKKRG 164 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + V GDG ++QG YE N A + I++++NNQYA+ T +A +++ Sbjct: 165 KKAVAVTYTGDGGSSQGDFYEGINFAGAFKSPAIFIVQNNQYAISTPRELQTAAKTIAQK 224 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 GV+ +P + VDGMD AV A +GP +IE + YRY H+M+ DP YR Sbjct: 225 GVAAGLPSILVDGMDALAVYVATRDARERAVNGEGPTLIETMCYRYGPHTMAGDDPTRYR 284 Query: 297 TREEINEMRSNHDPIEQVRKRL 318 T + NE + DP+ + RK L Sbjct: 285 TSDTDNEW-AQKDPLVRFRKYL 305 >gi|224155630|ref|XP_002188821.1| PREDICTED: similar to pyruvate dehydrogenase (lipoamide) alpha 1, partial [Taeniopygia guttata] Length = 90 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 52/90 (57%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +AALW L I+V ENN+Y MGTSV RA+A T++ KRG + IPG++VDGMDI V+ + Sbjct: 1 MAALWKLPCIFVCENNRYGMGTSVERAAASTDYYKRG--YFIPGLRVDGMDILCVREAVK 58 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 A YCR+ KGP+++E+ TYRY GHSMSDP Sbjct: 59 FAAEYCRSGKGPLVMELQTYRYHGHSMSDP 88 >gi|289663811|ref|ZP_06485392.1| pyruvate dehydrogenase E1 alpha subunit [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 362 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 82/309 (26%), Positives = 143/309 (46%), Gaps = 21/309 (6%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N +Q L+ ++ ML +R F+ K+ L G +G + CIG EA VG+ S+ GD Sbjct: 32 NPQQLLALFKRMLYVRTFDTKSVALQRTGKLGTYA-ACIGHEATHVGIGASMRSGDVFAP 90 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM-FSTKNGFYGGHGIVGAQVSL 166 +YRE+G + GV ++ G + G + + F + Q Sbjct: 91 SYREYGTMFERGVRPRDVLLYWGGDERGSDYPRDADAAIDFPICVP-------ISTQCLH 143 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A + K +R ++ V C GDG +++ Y + N A + L +I + NN +A+ Sbjct: 144 AAGAALSFKLQRKPQVAVACCGDGGSSKTDFYAALNSAGAYKLPLILCVINNGWAISVPR 203 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S + +++G++ + +QVDG D+ AV M +A A G +IE LTYR Sbjct: 204 SAQTGAQTLAQKGLAGGLHCLQVDGNDLVAVLEAMRQARVRALAGDGGTVIEFLTYRLSD 263 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLL---------HNKWASEGDLKEIEMNV 336 H+ +D A YR EE+ + + +P+ ++R+ L + W +E + ++ V Sbjct: 264 HTTADDARRYRGEEEVKQGWAR-EPLLRLRRYLTAQGLWDQAQEDAWKAECSAR-VDEEV 321 Query: 337 RKIINNSVE 345 +N V+ Sbjct: 322 NAYLNTPVQ 330 >gi|86741184|ref|YP_481584.1| pyruvate dehydrogenase [Frankia sp. CcI3] gi|86568046|gb|ABD11855.1| pyruvate dehydrogenase [Frankia sp. CcI3] Length = 388 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/267 (27%), Positives = 129/267 (48%), Gaps = 11/267 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y ++L RRF ++A L G + + GQEA + M L E D + +YR+ + Sbjct: 55 YHRLVLGRRFNQQATTLARQGRLAVYP-ASTGQEACQIAAAMVLRESDWLFPSYRDTLAV 113 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHM---FSTKNGFYGGHGIVGAQVSLGTGIAF 172 ++ GV + + LT +G G H ST H + A Sbjct: 114 VSRGV---RPVDALTLMRGNAHSGYDPREHRIAPLSTPLATQACHAV--GLAHAARLRAA 168 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 ++ + D + + GDG ++G +E+ N A + N V+++++NN YA+ +++ SA Sbjct: 169 SDPWAAEDVVALALIGDGGTSEGDFHEALNFAGVLNAPVVFLVQNNGYAISVPLAQQSAA 228 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + + V I G VDG D AV + AV + R+ +GP+++E +TYR H+ +D Sbjct: 229 PTLAHKAVGHGIIGRLVDGNDAPAVHGVLRAAVEHARSGRGPVLVEAVTYRLEAHTNADD 288 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRL 318 A YRT EE+ ++ DP+ + ++L Sbjct: 289 ATRYRTSEEVAAWQAR-DPLTLLERQL 314 >gi|164422564|ref|XP_960181.2| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor [Neurospora crassa OR74A] gi|157069720|gb|EAA30945.2| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor [Neurospora crassa OR74A] Length = 469 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 81/292 (27%), Positives = 136/292 (46%), Gaps = 12/292 (4%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+EAV VG +L+ D + YRE G G S M +L KG+ Sbjct: 140 FYMVSAGEEAVCVGSASALSPEDVVFCQYREQGVFKQRGFQLSDFMNQLFANHKDSGKGR 199 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQ 194 +H S + + + Q+ G A+A K +R ++ FG+GAA++ Sbjct: 200 NMPVHYGSKELNIHTISSPLATQLPQAAGAAYALKIQRMQNPTVPPRVVAAYFGEGAASE 259 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + + NIAA +++ NN YA+ T + RG+ + I ++VDG D Sbjct: 260 GDFHAALNIAATRGCPAVFICRNNGYAISTPTLEQYRGDGIASRGLGYGIETIRVDGNDF 319 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV+ +A G P++IE +TYR HS SD + YR + E+ + + +PI Sbjct: 320 WAVREVTKRARELALQDGGKPVLIEAMTYRVSHHSTSDDSFAYRAKVEVEDWKRRDNPIG 379 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA--ELYSDI 362 ++RK + E +E ++R+ I + F+Q++KE PA ++ D+ Sbjct: 380 RLRKWMEAKGIWDENMEREARDSIRRDILKA--FSQAEKEKKPAIRTMFEDV 429 >gi|88855175|ref|ZP_01129840.1| putative branched-chain alpha-keto acid dehydrogenase component [marine actinobacterium PHSC20C1] gi|88815703|gb|EAR25560.1| putative branched-chain alpha-keto acid dehydrogenase component [marine actinobacterium PHSC20C1] Length = 434 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 85/269 (31%), Positives = 124/269 (46%), Gaps = 13/269 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 VS+ +Q S Y ++++RR + +A L G +G + L GQEA VG +L D Sbjct: 103 VSDVTGDQLASLYEDLIIVRRIDTEATALQRQGELGLWPPL-FGQEAAQVGSARTLRPDD 161 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGS-MHMFSTKNGFYGGHGIVGA 162 + ++YRE+ GV ++ + +G S FS G I+GA Sbjct: 162 FVFSSYRENAVAYCRGVKLPDLVR--------VWRGTAASGWDPFSV--GMATPAVIIGA 211 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q TG A K D + V FGDGA ++G V E+ AA + VI+ +NNQ+A+ Sbjct: 212 QTLHATGYAVGCKKDGVDSVAVAYFGDGATSEGDVSEAMVFAASFKAPVIFFCQNNQWAI 271 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 V AQ + R F IP ++VDG D+ AV A A+ R GP IE +TY Sbjct: 272 SEPVG-LQAQRPIADRAPGFGIPSIRVDGNDVLAVMAATRSALDRARNGGGPTFIEAVTY 330 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPI 311 R H+ SD + + + DPI Sbjct: 331 RRGPHTTSDDPSRYVDPVVAKEWEARDPI 359 >gi|237834581|ref|XP_002366588.1| mitochondrial branched-chain alpha-keto acid dehydrogenase E1, putative [Toxoplasma gondii ME49] gi|211964252|gb|EEA99447.1| mitochondrial branched-chain alpha-keto acid dehydrogenase E1, putative [Toxoplasma gondii ME49] gi|221503622|gb|EEE29313.1| 2-oxoisovalerate dehydrogenase, putative [Toxoplasma gondii VEG] Length = 463 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 86/315 (27%), Positives = 150/315 (47%), Gaps = 6/315 (1%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 +G++ N E L AY+ M+ + ++ + G + + G+EA+ + ++L Sbjct: 105 DGWQCPMTNDEV-LEAYQFMVKLSIWDNMFYSVQRQGRISFYIQ-NQGEEALQTAVGLAL 162 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 + D + YRE G ++ G A + +L R+G SKG+ + + Sbjct: 163 DKKDHLFCQYRELGVLMLHGFTAEDALEQLFARRGDESKGRQMPISYSKHSVNLHTICTP 222 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + QV G +A K D+I V FG+GAA++G + + N AA ++V NN Sbjct: 223 LTTQVPHAAGAGYAFKLAGDDRIAVAFFGEGAASEGDFHAAMNFAATLKSQTLFVCRNNG 282 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ T V A + RG+S+ + ++VDG D+ A KA + + P++IE Sbjct: 283 YAISTPVKDQYAGDGIAIRGISYGMHTIRVDGNDLFASLLATKKAREIIVSQRQPVLIEF 342 Query: 280 LTYRYRGHSMSDPA-NYRTREEINEM-RSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNV 336 +TYR HS SD + YR E+ +S PI +VR+ L + N W+ + D +E+ + Sbjct: 343 MTYRVGHHSTSDDSFQYRPSGELEAWGQSGIHPIARVRRYLDNLNLWSDKQD-EELRKDA 401 Query: 337 RKIINNSVEFAQSDK 351 R + ++ + DK Sbjct: 402 RATMLRMMKVVEKDK 416 >gi|92399527|gb|ABE76505.1| mitochondrial branched-chain alpha-keto acid dehydrogenase E1 [Toxoplasma gondii] Length = 463 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 86/315 (27%), Positives = 150/315 (47%), Gaps = 6/315 (1%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 +G++ N E L AY+ M+ + ++ + G + + G+EA+ + ++L Sbjct: 105 DGWQCPMTNDEV-LEAYQFMVKLSIWDNMFYSVQRQGRISFYIQ-NQGEEALQTAVGLAL 162 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 + D + YRE G ++ G A + +L R+G SKG+ + + Sbjct: 163 DKKDHLFCQYRELGVLMLHGFTAEDALEQLFARRGDESKGRQMPISYSKHSVNLHTICTP 222 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + QV G +A K D+I V FG+GAA++G + + N AA ++V NN Sbjct: 223 LTTQVPHAAGAGYAFKLAGDDRIAVAFFGEGAASEGDFHAAMNFAATLKSQTLFVCRNNG 282 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ T V A + RG+S+ + ++VDG D+ A KA + + P++IE Sbjct: 283 YAISTPVKDQYAGDGIAIRGISYGMHTIRVDGNDLFASLLATKKAREIIVSQRQPVLIEF 342 Query: 280 LTYRYRGHSMSDPA-NYRTREEINEM-RSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNV 336 +TYR HS SD + YR E+ +S PI +VR+ L + N W+ + D +E+ + Sbjct: 343 MTYRVGHHSTSDDSFQYRPSGELEAWGQSGIHPIARVRRYLDNLNLWSDKQD-EELRKDA 401 Query: 337 RKIINNSVEFAQSDK 351 R + ++ + DK Sbjct: 402 RATMLRMMKVVEKDK 416 >gi|259503066|ref|ZP_05745968.1| pyruvate dehydrogenase complex E1 component [Lactobacillus antri DSM 16041] gi|259168932|gb|EEW53427.1| pyruvate dehydrogenase complex E1 component [Lactobacillus antri DSM 16041] Length = 371 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 135/288 (46%), Gaps = 16/288 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ F +Q + + M+ R E+ G +G F G+EA +G + + D Sbjct: 42 MANFTDDQLVDLMKKMVWERALHEQTMSFSQQGRLG-FYAPTWGEEASEMGTAAAFKKQD 100 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M AYR+ ++ G +++ G G ++F + I+GAQ Sbjct: 101 FMFPAYRDLPQLIQHGATVAQMYLWSKGHVKG---------NLFDARA--LRPQIIIGAQ 149 Query: 164 -VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V + G K D + G+G ++QG YE N A ++ +++I+NN +A+ Sbjct: 150 MVEMAGGALGIKKNGEKDTVAYAYTGEGGSSQGDTYEGMNFAGVFQAPAVFIIQNNGWAI 209 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +++GV+ IP +QVDGMD+ A +A + A GP++IE LTY Sbjct: 210 SYPRKLQTEAETIAQKGVAAGIPAVQVDGMDVLACYEVAKEAREFAAAGNGPVLIETLTY 269 Query: 283 RYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 R+ HS + DP+ YRT++E + + DP+ ++RK L K SE + Sbjct: 270 RFGAHSSAGDDPSRYRTKDE-EKPWFDKDPLIRLRKYLTEKKLWSEDE 316 >gi|269956884|ref|YP_003326673.1| Pyruvate dehydrogenase (acetyl-transferring) [Xylanimonas cellulosilytica DSM 15894] gi|269305565|gb|ACZ31115.1| Pyruvate dehydrogenase (acetyl-transferring) [Xylanimonas cellulosilytica DSM 15894] Length = 422 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 15/274 (5%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L Y M+++RR + +A L G + + L +GQEA VG +L D + ++YREH Sbjct: 72 LRLYEDMVVVRRIDAEATALQRQGELALWPPL-LGQEAAQVGSAHALRRDDFVFSSYREH 130 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 GV ++ E G G S +++M +T GGH + G ++G +A Sbjct: 131 AVAYVRGVTPVDLVREWRGVTG--SGWDPYAVNM-ATPQVIVGGHPLHGVGYAMGV-LAD 186 Query: 173 ANKYRRSDKICVVC-------FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 A + R D FGDGA +QG V E+F AA W+ V++ +NNQ+A+ Sbjct: 187 AERARAGDDTAAAETAAVVTYFGDGAMSQGAVSEAFVFAATWSAPVVFFCQNNQWAISEP 246 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V+ S + R F + G++VDG D+ AV A A+ R G ++E +TYR Sbjct: 247 VALQS-RVPLVNRAAGFGLAGVRVDGNDVLAVLAVTRAALHRARTGGGATLVEAVTYRRG 305 Query: 286 GHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ + DP YR E+ E DP+++ L Sbjct: 306 PHTTADDPTRYRDTAEV-EAWVRRDPVDRFAAHL 338 >gi|119960563|ref|YP_947289.1| pyruvate dehydrogenase E1 component, alpha subunit [Arthrobacter aurescens TC1] gi|119947422|gb|ABM06333.1| pyruvate dehydrogenase E1 component, alpha subunit [Arthrobacter aurescens TC1] Length = 365 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 86/276 (31%), Positives = 129/276 (46%), Gaps = 13/276 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + EQ S Y M +IRR + +A L G + + L +GQEA +G SL + D Sbjct: 27 VKDIGDEQLCSLYEDMTVIRRIDAEATALQRQGELALWPPL-LGQEAAQIGSSRSLRDDD 85 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +YRE G G S+I +G S G +T I+G+Q Sbjct: 86 FVFPSYRESGVAYVRGAHLSEIARVW---RGNASYGWDPLRINLATP------QIIIGSQ 136 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A + ++ + FGDGA ++G V E+ AA + V++ +NN +A+ Sbjct: 137 SLHATGYAMGVQLDGANTAVLAYFGDGATSEGDVNEAMVFAASYQAPVVFFCQNNHWAIS 196 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V R + + R F IP ++VDG D+ AV A A+ R GP IE +TYR Sbjct: 197 EPV-RIQSHVQLADRPTGFGIPSIRVDGNDVLAVMAATRVALDRARKGGGPTFIEAVTYR 255 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ + DP YR E+ + + DPI ++RK L Sbjct: 256 MGPHTTADDPTRYRDPIELEDWAAK-DPILRLRKLL 290 >gi|293189045|ref|ZP_06607776.1| putative transketolase, pyridine binding domain protein [Actinomyces odontolyticus F0309] gi|292822019|gb|EFF80947.1| putative transketolase, pyridine binding domain protein [Actinomyces odontolyticus F0309] Length = 817 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 92/352 (26%), Positives = 153/352 (43%), Gaps = 66/352 (18%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFE------EKAGQLYGMGMV-GGFCHLCIGQEAVIVGM 95 E++ + ++ + M+++R FE +K G G+ G HL IGQE+ VG Sbjct: 35 EIARYGEKGMVQMLHDMIVVRTFESMLDSIKKTGAWEGVEYNHPGPAHLGIGQESAYVGQ 94 Query: 96 KMSLTEGDQMITAYREHGHILA-C-----GVDASKI------------------------ 125 L+ D + ++R HG ILA C +D S++ Sbjct: 95 SYVLSPDDFIFGSHRSHGEILAKCYSAMHQMDESQLEGIMKDFLGGETLSYAEKIDYKDT 154 Query: 126 ------------MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +AE+ R+ G ++G GGSMH F G Y + IVG + G A Sbjct: 155 KDLTENFILFGALAEIFARKSGFNRGLGGSMHTFFLPFGSYPNNAIVGGSAPVANGAALF 214 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIA------ALW------NLNVIYVIENNQYA 221 + R I + GD A G V+E+ N A +LW N +++ NN Y Sbjct: 215 KRINRKPGIVISNVGDAALACGPVWEAMNFASMDQFRSLWREEDGGNPPILFNFFNNFYG 274 Query: 222 M-GTSVSRASAQTNFSKRGVSFNIPGM---QVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 M G + ++ G + N M +VDG++ AV + +GP+++ Sbjct: 275 MGGQTFGETMGYEILARVGAALNPEAMHAERVDGLNPLAVADATTRKKKILEEGRGPVLM 334 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 + +TYR+ GHS SD ++YRT+EE+ E+ D I++ L+ N ++ ++ Sbjct: 335 DTITYRFSGHSPSDASSYRTKEEV-ELWEQVDCIKEYSNLLISNGLTTQDEI 385 >gi|111223679|ref|YP_714473.1| putative branched-chain alpha-keto acid dehydrogenase E1-subunit alpha [Frankia alni ACN14a] gi|111151211|emb|CAJ62922.1| putative branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Frankia alni ACN14a] Length = 365 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 95/317 (29%), Positives = 145/317 (45%), Gaps = 25/317 (7%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M+L RR +E+A L G + + L GQEA VG ++ D + +YREH Sbjct: 41 YSSMVLARRLDEEATALQRQGELVLWIPLR-GQEAAQVGSAAAVRPRDFIFPSYREHAVA 99 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL-----GTGI 170 GV A++++ L +G S + T + IV A +L G G+ Sbjct: 100 WHRGVPAAEVIRLL----------RGVSHDGWDTAEHNMANYTIVLASQTLHAVGYGMGM 149 Query: 171 ----AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 A D +V GDGA +QG E+F AA + V+++ +NNQ+A+ T Sbjct: 150 VLDGAVGTGDPDRDGAVLVYLGDGAMSQGDANEAFVWAASFGAPVVFLCQNNQWAISTPT 209 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S ++R F PG++VDG D+ A+ A A+ + R GP++IE TYR Sbjct: 210 RRQSTM-QLARRADGFGFPGVRVDGNDVLAMHAVTTWALEHARGGGGPVLIEANTYRMAP 268 Query: 287 HSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 H+ SD A Y+ EE+ R+ DPIE R RLL S G E+ + + Sbjct: 269 HTTSDDATRYQPAEELAVWRAR-DPIE--RLRLLLAAEVSAGWFDEVREHADDAAGDLRR 325 Query: 346 FAQSDKEPDPAELYSDI 362 + P P ++ ++ Sbjct: 326 ACLAMDPPAPVTMFGNV 342 >gi|323493376|ref|ZP_08098498.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio brasiliensis LMG 20546] gi|323312199|gb|EGA65341.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio brasiliensis LMG 20546] Length = 368 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 89/318 (27%), Positives = 152/318 (47%), Gaps = 21/318 (6%) Query: 40 EGFEVSEFNKEQELSA----YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVG 94 +G V++ +L+ YR M+L R ++ KA L G +G + HL G EA VG Sbjct: 15 DGHSVNQLPAWADLATLTAFYRDMVLTRTYDNKAVALQRTGKLGTYPSHL--GSEAFGVG 72 Query: 95 MKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 + ++ D I YR+ + G+ K + G + +G H+ + G Sbjct: 73 IGHAMHPRDVFIPYYRDMPAMWVRGIAMEKNLQYWGGDE------RGSDFHVTPSNGGSP 126 Query: 155 GG-HGI-----VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 H + + Q + G+A A K +V GDGA ++G ES N A WN Sbjct: 127 EPCHDLPFCVPIATQCTHAVGVASALKIDNQHHAALVTCGDGATSKGDFLESINCAGAWN 186 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L +++V+ NNQ+A+ + A S + I G+ VDG D+ AV T+ A+ Sbjct: 187 LPLVFVVNNNQWAISVPRALQCAAEFLSDKAKGAGIIGVTVDGNDVVAVHDTVLAALDRA 246 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 R KGP +IE ++YR H+ +D A+ YR+ +E+N+ +PI++++ L+ N +E Sbjct: 247 RKGKGPTLIEAVSYRLSDHTTADDASRYRSSDELNQAW-QFEPIKRLKAYLVANGVWNEQ 305 Query: 328 DLKEIEMNVRKIINNSVE 345 +E + ++ + +VE Sbjct: 306 LEEEWLNSCKQQVEAAVE 323 >gi|178056466|ref|NP_001116555.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial [Sus scrofa] gi|169117920|gb|ACA43009.1| branched chain keto acid dehydrogenase E1 alpha polypeptide [Sus scrofa] Length = 447 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 84/321 (26%), Positives = 141/321 (43%), Gaps = 2/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 95 EDPHLPQEKVLKFYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 153 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ + KG+ +H + F + Sbjct: 154 DLVFGQYREAGVLMYRDYPLELFMAQCYSNVSDLGKGRQMPVHYGCRERHFVTISSPLAT 213 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 214 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 273 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 274 STPTSEQYRGDGIAARGPGYGILSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 333 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R HS SD ++ YR+ +E++ PI ++R L W + K RK + Sbjct: 334 RIGHHSTSDDSSAYRSVDEVSYWDKQDHPISRLRHYLQSRGWWDDEQEKAWRKQSRKKVM 393 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 + + A+ +P+P L+SD+ Sbjct: 394 EAFQQAERKLKPNPNLLFSDV 414 >gi|327441212|dbj|BAK17577.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component, eukaryotic type, alpha subunit [Solibacillus silvestris StLB046] Length = 371 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 88/314 (28%), Positives = 150/314 (47%), Gaps = 19/314 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + EQ + M+ +R ++++ L G +G F GQEA + +L + D Sbjct: 40 MPDLTDEQLVELMERMVYVRILDQRSISLNRQGRLG-FYAPTAGQEASQLASHYALEKED 98 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ I+ G+ K A L R I +++ + + I+GAQ Sbjct: 99 WILPGYRDVPQIVMHGLPLWK--AFLFSRGHFIGNQVPEGVNVLAPQI-------IIGAQ 149 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A + R S + + GDG ++QG YE N A + I++++NNQYA+ Sbjct: 150 YIQTAGVALGLQKRGSKTVAITYTGDGGSSQGDFYEGINFAGAFKSPAIFIVQNNQYAIS 209 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T +A +++G++ IP + VDGMD AV A A +GP +IE + YR Sbjct: 210 TPRELQTAAKTIAQKGIAAGIPSILVDGMDPLAVYAATKDARDRAVRGEGPTLIETMCYR 269 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKI 339 Y H+M+ DP YRT + NE + DP+ + R L K W + + IE ++ Sbjct: 270 YGPHTMAGDDPTRYRTTDIDNEWAAK-DPLVRFRT-FLEGKGLWDEQKEEAVIE-RAKEE 326 Query: 340 INNSVEFAQSDKEP 353 I ++++ Q+D+ P Sbjct: 327 IKDAIK--QADQAP 338 >gi|187735389|ref|YP_001877501.1| dehydrogenase E1 component [Akkermansia muciniphila ATCC BAA-835] gi|187425441|gb|ACD04720.1| dehydrogenase E1 component [Akkermansia muciniphila ATCC BAA-835] Length = 312 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 83/300 (27%), Positives = 130/300 (43%), Gaps = 4/300 (1%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY-REHGHILA 117 MLL R F+ K LY G + G +L G EA+ + LT G +I + RE + Sbjct: 1 MLLARAFDTKISSLYKAGKITGGVYLGRGHEAIAACGGVFLTAGYDVIAPFIREQAARVT 60 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY- 176 G + G G KG+ G++H G+ +G+ V+ G FA + Sbjct: 61 WGEPIIEAARAYLGSALGYMKGRDGNVHRGLPAEGYMAPISHLGSTVAFVIGCLFAKRLD 120 Query: 177 -RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + + V GDG + G +E+ N+A + L ++ V+ NNQ+A T R + + Sbjct: 121 GKLPGPVGVAFCGDGTTSTGAFHEAANMANVERLPLVLVVTNNQFAYSTPNIREFGEASL 180 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + RG + + DG D A T AV R +GP + T R GH D A+Y Sbjct: 181 ADRGRGYGFTVHETDGTDFMATLETFRTAVNNAREGRGPQWVLAKTLRMCGHGEHDDASY 240 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R E+ E DP+ ++LL W + + ++ + +V AQ + EPDP Sbjct: 241 IPR-ELKEEYEKKDPVAVAERQLLAAGWLTPEETAALKKQYADEVQLAVATAQREPEPDP 299 >gi|226360692|ref|YP_002778470.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Rhodococcus opacus B4] gi|226239177|dbj|BAH49525.1| branched-chain alpha-keto acid dehydrogenase E1 alpha subunit [Rhodococcus opacus B4] Length = 365 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 92/320 (28%), Positives = 143/320 (44%), Gaps = 23/320 (7%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + +Q Y +++ RR + +A L G +G + L +GQEA VG +L D Sbjct: 28 VRDIRPDQLRDLYEDLVVARRMDVEAVALQRQGELGLWAPL-LGQEAAQVGSARALRPDD 86 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +YREH GVD G + +G S S+ N +VG+Q Sbjct: 87 YAFISYREHAVAYCRGVD--------PGVMTRMWRGCAHSAWDPSSVN-VTNPAIVVGSQ 137 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A ++ + FGDGA +QG + E+ + +N V++ +NNQ+A+ Sbjct: 138 GLHATGYAMGAHLDGAEIATIAYFGDGATSQGDLAEALGFSMSFNAPVVFFCQNNQFAIS 197 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V S ++R + +P ++VDG D+ AV A +A R GP IE +TYR Sbjct: 198 EPVHLQSP-VPIAQRAAGYGMPALRVDGNDVLAVLAVTRQATQRAREGSGPTFIEAITYR 256 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN----VRK 338 H+ S DP YR E E+ DPI+++R+ L E L ++ + Sbjct: 257 MGPHTTSDDPTRYRAAAE-TEIWKARDPIDRMRRLLDREGLLGEEFLARVQATADAVAAR 315 Query: 339 IINNSVEFAQSDKEPDPAEL 358 + + +VE PDPA L Sbjct: 316 LRSGTVE------APDPAPL 329 >gi|158318984|ref|YP_001511492.1| pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EAN1pec] gi|158114389|gb|ABW16586.1| Pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EAN1pec] Length = 359 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 23/262 (8%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCI-----GQEAVIVGMKMSLTEGDQMITAYREHG 113 M+++RR +++ L G LC+ GQEA VG +L D +YREHG Sbjct: 44 MIIVRRLDDEGTALQRQG------ELCLWASLRGQEAAQVGSGRALGPSDMAFPSYREHG 97 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 VD + G G G + H F+ Y +VG+Q G A Sbjct: 98 VAWCREVDPLHVFGLFRGTSLG---GWDPAEHGFA----LYAI--VVGSQTLHAAGYAMG 148 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 D + FGDGA+++G V E+F A++++ +++ +NNQ+A+ R S + Sbjct: 149 ITRDGGDGAAISYFGDGASSEGDVSEAFGWASVFSAPLVFFCQNNQWAISEPYRRQS-RV 207 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DP 292 +R F P ++VDG D+ A A A+ R+ GP+++E LTYR H+ + DP Sbjct: 208 PVYQRARGFGFPSVRVDGNDVLATLAVTRWALRQARSGGGPVLVEALTYRINPHTTADDP 267 Query: 293 ANYRTREEINEMRSNHDPIEQV 314 + YR +E++ R DPIE++ Sbjct: 268 SRYRPADEVSSWRMR-DPIERL 288 >gi|302543917|ref|ZP_07296259.1| LOW QUALITY PROTEIN: putative 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Streptomyces hygroscopicus ATCC 53653] gi|302461535|gb|EFL24628.1| LOW QUALITY PROTEIN: putative 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Streptomyces himastatinicus ATCC 53653] Length = 375 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 127/279 (45%), Gaps = 11/279 (3%) Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 GQEA V + L E D + +YR+ + G+D + + L G + + Sbjct: 82 STGQEACQVAAGLVLEERDWLFPSYRDTLAAVVRGLDPVQALTLLRGDWHSGYDPREHRV 141 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 ST + Q+ G+A A + D + + GDG ++G +E+ N A Sbjct: 142 APLSTP---------LATQLPHAVGLAHAAHLKGDDVVALALVGDGGTSEGDFHEALNFA 192 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 A+W V+++++NN +A+ +++ +A + + + V + +PG VDG D AV + +A Sbjct: 193 AVWQAPVVFLVQNNGFAISVPLAKQTAAPSLAHKAVGYGMPGRLVDGNDAAAVHQVLGEA 252 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKW 323 V R GP ++E +TYR H+ +D A YR+ E+ R HDPI + + Sbjct: 253 VRRARGGGGPTLVEAVTYRIDAHTNADDATRYRSDAEVEAWR-EHDPIALLEAAIRDRGL 311 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + ++ + + ++ + D DP EL+ + Sbjct: 312 LGDDGIRAVRDSAERLAADLRTRMHQDPVLDPLELFEHV 350 >gi|297181713|gb|ADI17895.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (e1) component, eukaryotic type, alpha subunit [uncultured Chloroflexi bacterium HF0200_06I16] Length = 308 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 4/256 (1%) Query: 109 YREHGHILACGVDASKIMAELTGRQGG-ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+ +A G+ + M G+ G S G+ + + +V A ++ Sbjct: 52 YRDLALKVAAGLTPVQTMMSFMGKAGDPYSSGRQFPLQGADLPHNIIQISNVVAAGLTQS 111 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A + + +V FGDGA +QG+ +E+ N A++ L VI++ ENN+YA+ T S Sbjct: 112 VGYALGCRMAGEQTVVLVYFGDGATSQGETHEAMNFASIHKLPVIFICENNRYAISTPQS 171 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + R + PG VDGMD+ + +A+ + RA +GP+++EM+ R+ H Sbjct: 172 TQMVVEEVASRAAGYGFPGFTVDGMDLISCYEATREAITHARA-QGPVLLEMMVERFMSH 230 Query: 288 SM-SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + D YR E+ + R DP+ + LL ++ + EI K + + + Sbjct: 231 TTDDDDRRYRPEGEVEQAR-ERDPVSTFGQTLLDQGILTQSKIDEISAAALKATDEATDI 289 Query: 347 AQSDKEPDPAELYSDI 362 A + PD + L+ + Sbjct: 290 ADASSPPDESVLHDSV 305 >gi|154508699|ref|ZP_02044341.1| hypothetical protein ACTODO_01205 [Actinomyces odontolyticus ATCC 17982] gi|153798333|gb|EDN80753.1| hypothetical protein ACTODO_01205 [Actinomyces odontolyticus ATCC 17982] Length = 817 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 91/352 (25%), Positives = 153/352 (43%), Gaps = 66/352 (18%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFE------EKAGQLYGMGMV-GGFCHLCIGQEAVIVGM 95 E++ + ++ + M+++R FE +K G G+ G HL IGQE+ VG Sbjct: 35 EIARYGEKGMVQMLHDMIVVRTFESMLDSIKKTGAWEGVEYNHPGPAHLGIGQESAYVGQ 94 Query: 96 KMSLTEGDQMITAYREHGHILA-C-----GVDASKI------------------------ 125 L+ D + ++R HG ILA C +D S++ Sbjct: 95 SYVLSPDDFIFGSHRSHGEILAKCYSAMHQMDESQLEGIMKGFLGGETLSYAEKIDYKDT 154 Query: 126 ------------MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 +AE+ R+ G ++G GGSMH F G Y + IVG + G A Sbjct: 155 KDLTENFILFGALAEIFARKSGFNRGLGGSMHTFFLPFGSYPNNAIVGGSAPIANGAALF 214 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIA------ALW------NLNVIYVIENNQYA 221 + R I + GD A G V+E+ N A +LW N +++ NN Y Sbjct: 215 KRINRKPGIVISNIGDAAMACGPVWEAMNFASMDQFRSLWREEDGGNPPILFNFFNNFYG 274 Query: 222 M-GTSVSRASAQTNFSKRGVSFNIPGM---QVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 M G + ++ G + N M +VDG++ AV + +GP+++ Sbjct: 275 MGGQTFGETMGYEILARVGAALNPEAMHAERVDGLNPLAVADATTRKKKILEEGRGPVLM 334 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 + +TYR+ GHS SD ++YRT+EE++ + D I++ L+ N ++ ++ Sbjct: 335 DTITYRFSGHSPSDASSYRTKEEVD-LWEQVDCIKEYSNLLISNGLTTQDEI 385 >gi|134101992|ref|YP_001107653.1| putative 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) E1-alpha chain [Saccharopolyspora erythraea NRRL 2338] gi|291004975|ref|ZP_06562948.1| putative 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) E1-alpha chain [Saccharopolyspora erythraea NRRL 2338] gi|133914615|emb|CAM04728.1| putative 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) E1-alpha chain [Saccharopolyspora erythraea NRRL 2338] Length = 376 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/309 (25%), Positives = 141/309 (45%), Gaps = 12/309 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR ++ RR+ ++A L G + + GQEA V +L+ D + YR+ Sbjct: 53 YRDVVRGRRYNQQATALAKQGRLAVYPS-TTGQEACEVAAARALSPQDWIFPTYRDTLAA 111 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + GVD + +A + +G G H + + + Q+ G A A + Sbjct: 112 IVRGVDPVEALAVM---RGDWHHGYDPHEHRVAPLST------PLATQLPHAVGFARAAR 162 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + D + + GDG ++G +E+ N AA+W V+++++NN +A+ +++ +A Sbjct: 163 LKGEDTVVLAMVGDGGTSEGDFHEAVNFAAVWQAPVVFLVQNNGFAISVPLAKQTAALAL 222 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + + + IPG VDG D+ AV + AV R GP ++E +TYR H+ S D + Sbjct: 223 ADKAAGYGIPGRLVDGNDVAAVHQVLTAAVENARHGGGPTLVEAVTYRIDPHTNSDDDSR 282 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YR + + R HDP+ + + L S+ D+++ + + E PD Sbjct: 283 YRDPSDADTWR-EHDPVLVLERCLSDMGVLSDADIEDAARSADDFAADLRERHGHPPNPD 341 Query: 355 PAELYSDIL 363 P L+S + Sbjct: 342 PMTLFSHVF 350 >gi|331701104|ref|YP_004398063.1| pyruvate dehydrogenase E1 component subunit alpha [Lactobacillus buchneri NRRL B-30929] gi|329128447|gb|AEB73000.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Lactobacillus buchneri NRRL B-30929] Length = 373 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 86/323 (26%), Positives = 148/323 (45%), Gaps = 21/323 (6%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +F+ ++ ++ M+ R E+ G +G F G+EA +G+ ++ + D + Sbjct: 43 QFSDDELVTLMEKMVWERALHEQTMNFSRQGRLG-FYAPTYGEEASEMGIAHAMKKQDYL 101 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 AYR+ ++ G T ++G + SKG + + I+GAQ Sbjct: 102 FPAYRDLPQLIQHGA---------TVKEGYLWSKGHYQAYDYVRRGVRAFIPQIIIGAQY 152 Query: 165 SLGTGIAFA-NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A K D + GDG +QG YE N A+ + ++ ++NN +A+ Sbjct: 153 VQSAGAALGIKKNGEKDTVAYTFTGDGGTSQGDFYEGINFASSFQAPEVFFVQNNGWAIS 212 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 +A +++GV+ +PG+QVDGMDI A +A + A GP ++E LTYR Sbjct: 213 VPRKTQTAAETLAQKGVASGVPGVQVDGMDILATYLVAKEARDFVVAGNGPALVETLTYR 272 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKII 340 + HS + DP+ YRT+E+ + + DP+ ++RK L K W + + K + Sbjct: 273 FGAHSSAGDDPSRYRTKEQ-EKPWFDRDPLIRLRKVLTDKKLWDQDKEDKLVAQ-----Y 326 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 + + A D E P + SD L Sbjct: 327 KDEFKEAMKDAEAAPKQKVSDFL 349 >gi|146275966|ref|YP_001166126.1| dehydrogenase, E1 component [Novosphingobium aromaticivorans DSM 12444] gi|145322657|gb|ABP64600.1| dehydrogenase, E1 component [Novosphingobium aromaticivorans DSM 12444] Length = 315 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 81/243 (33%), Positives = 119/243 (48%), Gaps = 4/243 (1%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 G+ H GQEA +G +L D + R + G+D I+ +L G+ G + G Sbjct: 37 GWWHPGEGQEAAPIGATAALEADDYVWYQGRGCAWAIGKGMDPLPILGDLLGKTNGATGG 96 Query: 140 KGGSM-HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 KGG + H G G +G+ L G A A+K R+ ++ + FGDG A++G + Sbjct: 97 KGGGVPHWADYSLGIMGEGATLGSVYPLAAGSALASKIRKDGRVSLANFGDGTASRGTFH 156 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 E+ AA W L +IY ENN +GT + SA + + + IPG+ VDG D AV Sbjct: 157 ETMMHAAAWKLPLIYFCENNGLLVGTRTEQVSATADIANLAKGYGIPGVIVDGQDAVAVW 216 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 +A A RA KGP +IE R GH DP +YR + + + R DP++ + RL Sbjct: 217 EATREAAARARAGKGPTLIEAKVTRKHGHYAGDPQHYRDPDYLRDYR---DPLDLLAARL 273 Query: 319 LHN 321 N Sbjct: 274 AGN 276 >gi|209546465|ref|YP_002278383.1| 3-methyl-2-oxobutanoate dehydrogenase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537709|gb|ACI57643.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 410 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 81/284 (28%), Positives = 138/284 (48%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E+ L+ R M+ +R F+ + G F +G+EAV + +L +GD Sbjct: 72 LSDEELLTGLRNMMKLRAFDARMLMAQRQGKTS-FYMQHLGEEAVSCAFRKALNKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A ++M ++ + +G+ + S ++GF+ G + Q Sbjct: 131 PTYRQAGLLIADDYPMVEMMNQIYSNESDPLRGRQLPIMYSSKEHGFFTISGNLATQYVQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ + +I GDG+ + + + A+ + VI I NNQ+A+ T Sbjct: 191 AVGWAMASAIKNDSRIAAAWIGDGSTAESDFHSALVFASTYKAPVILNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG+ F IP ++VDG D AV A A R + GP +IE +TYR Sbjct: 251 GIARGGSGT-FAARGLGFGIPALRVDGNDYLAVHAVARWAAERARRNLGPTLIEYVTYRV 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL-HNKWASE 326 HS S DP+ YR + E +E DP+ +++K L+ W+ E Sbjct: 310 GAHSTSDDPSAYRPKTE-SEAWPLGDPVLRLKKHLIVKGAWSEE 352 >gi|163840257|ref|YP_001624662.1| pyruvate dehydrogenase E1 component alpha subunit [Renibacterium salmoninarum ATCC 33209] gi|162953733|gb|ABY23248.1| pyruvate dehydrogenase E1 component alpha subunit [Renibacterium salmoninarum ATCC 33209] Length = 377 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 90/320 (28%), Positives = 147/320 (45%), Gaps = 23/320 (7%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLML 60 M V +T ++ + S + + +++V +++P S + +Q+ Y+LM Sbjct: 3 MTVQVTRLTATPVRREADVSTAPRNERSTTVTTLEVP------PSNLSADQQRELYQLMA 56 Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILACG 119 +R + G++ G+ GQEA VG +L +G D + YRE G A G Sbjct: 57 AVRHLDVSTIGWQRQGIIPGYAP-GRGQEAAQVGSAYALEKGKDFIFPTYREVGVARAWG 115 Query: 120 VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 VD M+ + GG +++ F +V V G A ++ Sbjct: 116 VDMIAYMSTHK------ATWHGGLYDPMASR--FAPIQAVVAGSVLHAVGWAHGQTLDQA 167 Query: 180 D-----KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + + V FGDG ++QG V+E+ N AA++ VI+ ++NN +A+ R A + Sbjct: 168 EAGAPLNVAVTYFGDGGSSQGDVHEAMNFAAVFKAPVIFFVQNNGWAISVPTERQVAGGS 227 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 S R + I +Q+DG D+ AV A A AY A GP++IE +TYR HS S DP Sbjct: 228 VSARAAGYGIATVQIDGNDVEAVYAATKAARAYASAGNGPVLIEAMTYRRGPHSTSDDPG 287 Query: 294 NYRTREEINEMRSNHDPIEQ 313 YR+ EE DP+++ Sbjct: 288 RYRSLEE-ERAEGGQDPVDR 306 >gi|313228133|emb|CBY23283.1| unnamed protein product [Oikopleura dioica] Length = 416 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 86/320 (26%), Positives = 148/320 (46%), Gaps = 5/320 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +F KEQ + Y+ M+ F+ G V F G+EA +G +L D + Sbjct: 66 KFTKEQCVKMYKAMIKTNEFDRVMYDAQRQGRVS-FYMTNYGEEAAQIGSIAALNPDDLV 124 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 YRE G I G + + G G+ +H S + + + Q+ Sbjct: 125 YAQYREAGVIFYRGFTYQQACDQCYGNVDDKGAGRQMPVHYGSRELDYVTISSPLTTQLP 184 Query: 166 LGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G AFA + R +K V+C FG+G+A++G + +FN AA N VI+ NN +A+ T Sbjct: 185 QAAGSAFALR-RAGEKRVVMCYFGEGSASEGDAHAAFNFAATLNCPVIFFCRNNGFAIST 243 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 V + R + + ++VDG D+ AV KA + PI+IE +TYR Sbjct: 244 PVEDQYNGDGIASRAPGYGMMTIRVDGNDLMAVFNATVKAREIALSENRPILIEAITYRQ 303 Query: 285 RGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK-IINN 342 HS SD ++ YR+ +E+N + PI + R+ ++ W S + ++ +++K ++ Sbjct: 304 GHHSTSDDSSRYRSVDEVNMWQKTDHPISRFRQYMMTQGWWSMEEDAALQKSLKKDVLIF 363 Query: 343 SVEFAQSDKEPDPAELYSDI 362 + A+ K+P ++ D+ Sbjct: 364 PLVTAEKKKKPSIESMFDDV 383 >gi|86360115|ref|YP_472004.1| 2-oxoisovalerate dehydrogenase alpha subunit protein [Rhizobium etli CFN 42] gi|86284217|gb|ABC93277.1| 2-oxoisovalerate dehydrogenase alpha subunit protein [Rhizobium etli CFN 42] Length = 410 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 82/284 (28%), Positives = 137/284 (48%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 N E+ L+ R M+ +R F+ + G F +G+EAV + +L +GD Sbjct: 72 LNDEELLTGLRNMMKLRAFDARMLMAQRQGKTS-FYMQHLGEEAVSCAFRKALAKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A ++M ++ + G+ + S ++GF+ G + Q Sbjct: 131 PTYRQAGLLIADDYPMVEMMNQIYSNESDPLHGRQLPIMYSSKEHGFFTISGNLATQYVQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ + +I GDG+ + + + A+ + VI I NNQ+A+ T Sbjct: 191 AVGWAMASAIKNDSRIAAAWIGDGSTAESDFHSALVFASTYKAPVILNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG+ F IP ++VDG D AV A A R + GP +IE +TYR Sbjct: 251 GIARGGSGT-FAARGLGFGIPALRVDGNDYLAVHAVARWAAERARRNLGPTLIEHVTYRV 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL-HNKWASE 326 HS S DP+ YR + E +E DP+ +++K L+ W+ E Sbjct: 310 GAHSTSDDPSAYRPKTE-SEAWPLGDPVLRLKKHLIVKGVWSEE 352 >gi|15790810|ref|NP_280634.1| pyruvate dehydrogenase alpha subunit [Halobacterium sp. NRC-1] gi|10581366|gb|AAG20114.1| pyruvate dehydrogenase alpha subunit [Halobacterium sp. NRC-1] Length = 322 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 88/305 (28%), Positives = 137/305 (44%), Gaps = 13/305 (4%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R F+E+A L G + G+ GQE VG +L D + YR + LA Sbjct: 1 MVRARHFDERALALQRRGWMPGYPPFK-GQEGSQVGAAHALAGDDWLFPTYRSNAMQLAR 59 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GV AS ++ GR H N F I +Q+ G A Y Sbjct: 60 GVPASDLLLFRRGR---------AEFHSDHDHNVFPQAVPIA-SQIPHAVGAGMAMSYTD 109 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 S + + FGDGA ++G ++ N A +++ V++ ENN +A+ R +A + + + Sbjct: 110 SGQASLAYFGDGATSEGDFHQGMNFAGVFDAPVVFFCENNNWAISLPRERQTASDSIAAK 169 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRT 297 ++ G+QVDG D AV T+ A+A R PI++E LTYR H+ S DP YR Sbjct: 170 ADAYGFEGVQVDGNDPLAVYETVTDALAGAR-DGTPILVESLTYRQGAHTTSDDPDRYRP 228 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 EE DP+++ L G ++E I+++VE A++ P E Sbjct: 229 EEEDLPAWRTADPVDRYADYLHDQGVIDAGFVEECFDAAADEIDDAVETAEAAGAPAVDE 288 Query: 358 LYSDI 362 L+ + Sbjct: 289 LFDHV 293 >gi|119387480|ref|YP_918514.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Paracoccus denitrificans PD1222] gi|119378055|gb|ABL72818.1| branched-chain alpha-keto acid dehydrogenase E1 component [Paracoccus denitrificans PD1222] Length = 417 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 88/335 (26%), Positives = 150/335 (44%), Gaps = 15/335 (4%) Query: 37 PFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 P+ E +++ E L R M+ +R ++ + F +G+EA+ + Sbjct: 72 PWAEALDIT---PEDLLEGLRHMMTLRIYDARMLNAQRQQKTS-FYMQHLGEEAISCAFQ 127 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 +L GD YR+ G ++A G S +M ++ +G+ + S ++GF+ Sbjct: 128 RALAPGDMNFPTYRQAGLLIAAGYPLSAMMNQIFSNSEDPMRGRQLPVCYSSREHGFFTI 187 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 G + Q G A+ KI GDG+ + + + A+ + V+ I Sbjct: 188 SGNLATQFIQAVGWGMASAISGDRKISAAWIGDGSTAESDFHAALVFASTYKAPVVLNIV 247 Query: 217 NNQYAMGT--SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 NNQ+A+ T ++R + T F+ RG F IP ++VDG D AV A A R + GP Sbjct: 248 NNQWAISTFQGIARGGSGT-FAARGHGFGIPSLRVDGNDYLAVLAVAKWAAERARRNLGP 306 Query: 275 IIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 +IE +TYR GHS S DP+ YR EE DPI +++ L+ S+ + E Sbjct: 307 TLIEYVTYRAGGHSTSDDPSAYRPAEESTAWPLG-DPILRLKNHLIALGIWSDDRHAQAE 365 Query: 334 MNVRKIINNSVEFAQS------DKEPDPAELYSDI 362 + I + A++ + P PA+++ D+ Sbjct: 366 AEILAEITEQQKRAEAIGTLHHGQHPSPADMFEDV 400 >gi|119470054|ref|XP_001257999.1| 2-oxoisovalerate dehydrogenase complex alpha subunit, putative [Neosartorya fischeri NRRL 181] gi|119406151|gb|EAW16102.1| 2-oxoisovalerate dehydrogenase complex alpha subunit, putative [Neosartorya fischeri NRRL 181] Length = 446 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 89/329 (27%), Positives = 150/329 (45%), Gaps = 21/329 (6%) Query: 48 NKEQELSAYRLMLLIR-----RFE-EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 + E+ L+ Y+ ML + FE ++ G+L F + G+E + VG +LT Sbjct: 87 SNEEILTWYKNMLTVSVMDVIMFEAQRQGRL-------SFYMVSAGEEGISVGSAAALTP 139 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D + YRE G G M++L + +G+ +H S + + Sbjct: 140 DDVVFAQYRETGVFQQRGFTLKDFMSQLFANRNDNGRGRNMPVHYGSNYPRTHTISSPLA 199 Query: 162 AQVSLGTGIAFANKYR------RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 Q+ +G A+A K + +I FG+GAA++G + NIAA + V+++ Sbjct: 200 TQIPQASGAAYALKLQALQNPDTPPRIVACYFGEGAASEGDFHAGLNIAATRSCPVVFIC 259 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 NN YA+ T + RGV + I ++VDG DI AV M +A G P Sbjct: 260 RNNGYAISTPTLEQYRGDGIASRGVGYGIDTIRVDGNDIFAVYEAMREARRIALTDGGRP 319 Query: 275 IIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 ++IE ++YR HS SD + YR R E+ + + +PI ++RK L + +E +E Sbjct: 320 VLIEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIIRLRKWLENEGLWNEDMEQETR 379 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +RK + A+ +K+P + D+ Sbjct: 380 DQLRKAVLKEFGDAEREKKPPIRAAFEDV 408 >gi|227823512|ref|YP_002827485.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Sinorhizobium fredii NGR234] gi|227342514|gb|ACP26732.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Sinorhizobium fredii NGR234] Length = 410 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 84/284 (29%), Positives = 136/284 (47%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E+ L+ R M+L+R F+ + G F +G+EAV + +L GD Sbjct: 72 LSDEELLTGLRHMMLLRAFDARMLMAQRQGKTS-FYMQHLGEEAVSCAFRRALRRGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + G+ + S ++GF+ G + Q Sbjct: 131 PTYRQAGLLIADDYPMVDMMNQIFSNELDPCHGRQLPVMYTSKEHGFFTISGNLATQYVQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ + +I GDG+ + + S A+ + VI I NNQ+A+ T Sbjct: 191 AVGWAMASAIKNDTRIAAGWIGDGSTAESDFHSSLVFASTYKAPVILNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG+ F IP ++VDG D AV A A R + GP +IE +TYR Sbjct: 251 GIARGGSGT-FAARGLGFGIPALRVDGNDYLAVYAVARWAAERARRNLGPTLIEYVTYRV 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASE 326 HS S DP+ YR + E +E DP+ +++K L L W+ E Sbjct: 310 GAHSTSDDPSAYRPKTE-SEAWPLGDPVLRLKKHLILRGVWSDE 352 >gi|268316554|ref|YP_003290273.1| dehydrogenase E1 component [Rhodothermus marinus DSM 4252] gi|262334088|gb|ACY47885.1| dehydrogenase E1 component [Rhodothermus marinus DSM 4252] Length = 710 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 90/318 (28%), Positives = 142/318 (44%), Gaps = 10/318 (3%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-- 102 ++F+ + L YR MLL RR +EK L G GF H+ L++ Sbjct: 45 ADFDADTLLRVYRTMLLARRLDEKMLTLLKQGK--GFFHIGGAGHEAAQAAAGLLSKPGF 102 Query: 103 DQMITAYREH-GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D YR+ +++ G ++A L S G+ H VG Sbjct: 103 DWFWMYYRDLCTYLMLGGRPEDVLLAHLAKADDPNSGGRQMPAHYSDRAKNIVTPSSSVG 162 Query: 162 AQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 +Q G+A + RR +K V C G+GA +QG +E+ N AA V+Y I+NN+Y Sbjct: 163 SQFLPALGLAMGIQ-RRGEKAYVYCSAGEGATSQGAFHEALNWAARIKAPVLYFIQNNRY 221 Query: 221 AMGTSVSRASAQTNFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 A+ + +A N K G + + + VDG D A A+ + RA KGP+++ Sbjct: 222 AISVPIEEQTAGGNPYKLGAGYEGLARIHVDGTDFFKAYAATRAAIEHLRAGKGPVLLVA 281 Query: 280 LTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 R HS SD A YR EE+ + R DPI ++ + L ++EI VR+ Sbjct: 282 DVVRLLPHSSSDNHAKYRLPEELEKDR-QLDPILRMEQALQEAGLLDAEQIEEIRRAVRR 340 Query: 339 IINNSVEFAQSDKEPDPA 356 ++ + +A+ +PDP+ Sbjct: 341 QVDEAARWAEKQPDPDPS 358 >gi|70991847|ref|XP_750772.1| 2-oxoisovalerate dehydrogenase complex alpha subunit [Aspergillus fumigatus Af293] gi|66848405|gb|EAL88734.1| 2-oxoisovalerate dehydrogenase complex alpha subunit, putative [Aspergillus fumigatus Af293] gi|159124334|gb|EDP49452.1| 2-oxoisovalerate dehydrogenase complex alpha subunit, putative [Aspergillus fumigatus A1163] Length = 446 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 89/331 (26%), Positives = 151/331 (45%), Gaps = 21/331 (6%) Query: 46 EFNKEQELSAYRLMLLIR-----RFE-EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + E+ L+ Y+ ML + FE ++ G+L F + G+E + VG +L Sbjct: 85 DVSNEEILTWYKNMLTVSVMDVIMFEAQRQGRL-------SFYMVSAGEEGISVGSAAAL 137 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 T D + YRE G G M++L + +G+ +H S + Sbjct: 138 TPDDVVFAQYREAGVFQQRGFTLRDFMSQLFANRNDNGRGRNMPVHYGSNYPRTHTISSP 197 Query: 160 VGAQVSLGTGIAFANKYR------RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 + Q+ +G A+A K + +I FG+GAA++G + NIAA + V++ Sbjct: 198 LATQIPQASGAAYALKLQALQNPDTPPRIVACYFGEGAASEGDFHAGLNIAATRSCPVVF 257 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 + NN YA+ T + RGV + I ++VDG DI AV M +A G Sbjct: 258 ICRNNGYAISTPTLEQYRGDGIASRGVGYGIDTIRVDGNDIFAVYEAMREARRIALTDGG 317 Query: 274 -PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 P++IE ++YR HS SD + YR R E+ + + +PI ++RK L + +E +E Sbjct: 318 RPVLIEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIIRLRKWLENEGLWNEDMEQE 377 Query: 332 IEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +RK + A+ +K+P + D+ Sbjct: 378 TRDQLRKAVLKEFGDAEREKKPPIRAAFEDV 408 >gi|149184105|ref|ZP_01862445.1| PdhA [Bacillus sp. SG-1] gi|148848185|gb|EDL62495.1| PdhA [Bacillus sp. SG-1] Length = 317 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 83/279 (29%), Positives = 133/279 (47%), Gaps = 16/279 (5%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + +L + D ++ YR+ I+ Sbjct: 2 MVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQIASHYALEKDDWILPGYRDVPQIVWH 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ + G G +G +++ S + I+GAQ G+A K R Sbjct: 61 GLPLYQAFLFSRGHFKGNQPPEG--VNVLSPQI-------IIGAQYIQTAGVALGLKKRG 111 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + + GDG ++QG YE N A ++ I+V++NNQ+A+ T + +A +++ Sbjct: 112 KQSVAITYTGDGGSSQGDFYEGINFAGAFSAPAIFVVQNNQFAISTPRDKQTAGKTIAQK 171 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ IPG+ VDGMD AV A +A +GP +IE YRY H+M+ DP YR Sbjct: 172 AVAAGIPGVLVDGMDPLAVYAVTREARERAVNGEGPTLIETHCYRYGPHTMAGDDPTRYR 231 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIE 333 + E E DP+ + RK L K W E + + IE Sbjct: 232 SSEMDTEW-ERKDPLVRFRK-FLEGKGLWNEEKENEVIE 268 >gi|183983313|ref|YP_001851604.1| pyruvate dehydrogenase E1 component (alpha subunit) [Mycobacterium marinum M] gi|183176639|gb|ACC41749.1| pyruvate dehydrogenase E1 component (alpha subunit) [Mycobacterium marinum M] Length = 353 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 114/237 (48%), Gaps = 2/237 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR+M+ +R EE + + G+V G H IG+E ++ G+ L E D + +R + Sbjct: 10 YRMMVRMRLAEEALVEAWQEGLVPGEYHSAIGEEGIVAGILTQLFEFDTLALDHRNTAPL 69 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G+D +M E+ G GI+ G G MH+F + G GIVGA L G A A+ Sbjct: 70 VGRGIDLQALMLEVLGSDQGIASGMAGHMHIFD-PDLRAGADGIVGAAGPLAVGHAIAHT 128 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + + G+ A NQG + E++N+A WNL V++V ++N++ + T+ S+ + Sbjct: 129 QLHPGSVAIAFHGEAAMNQGMLMEAYNMAVAWNLPVVFVCKDNKWGI-TTYSKDQTGADP 187 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 R F + G + V A + + R+ GP + + R GH DP Sbjct: 188 ISRARGFGLEVASAAGHKVADVHAAAGRLIERARSGNGPGFLYVTCRRPGGHFEGDP 244 >gi|169826943|ref|YP_001697101.1| pyruvate dehydrogenase E1 component subunit alpha [Lysinibacillus sphaericus C3-41] gi|168991431|gb|ACA38971.1| Pyruvate dehydrogenase E1 component, alpha subunit [Lysinibacillus sphaericus C3-41] Length = 371 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 77/262 (29%), Positives = 122/262 (46%), Gaps = 13/262 (4%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + +L + D ++ YR+ I+ Sbjct: 55 MVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASHFALEQEDWILPGYRDVPQIVWH 113 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ K G G +G ++ I+GAQ G+A + R Sbjct: 114 GLPLDKAFLFSRGHFMGNQVPEGVNV---------LAPQIIIGAQYIQAAGVALGIQKRG 164 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + V GDG ++QG YE N A + I++++NNQYA+ T +A +++ Sbjct: 165 KKAVAVTYTGDGGSSQGDFYEGINFAGAFKSPAIFIVQNNQYAISTPRELQTAAKTIAQK 224 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 GV+ +P + VDGMD AV A +GP +IE + YRY H+M+ DP YR Sbjct: 225 GVAAGLPSILVDGMDALAVYVATRDARERAINGEGPTLIETMCYRYGPHTMAGDDPTRYR 284 Query: 297 TREEINEMRSNHDPIEQVRKRL 318 T + NE + DP+ + RK L Sbjct: 285 TSDTDNEW-AQKDPLVRFRKYL 305 >gi|115400449|ref|XP_001215813.1| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114191479|gb|EAU33179.1| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 443 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 87/318 (27%), Positives = 148/318 (46%), Gaps = 15/318 (4%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE+ ++ Y+ ML + + + G + F + G+E + VG +LT D + Sbjct: 85 KEEIVAWYKNMLTVSIMDVIMFEAQRQGRIS-FYMVSAGEEGIGVGTAAALTPDDVVFAQ 143 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YRE G G M++L + +G+ H S + + Q+ + Sbjct: 144 YRETGVYQQRGFTLKDFMSQLFANKYDSGRGRNMPCHYGSKYPRIHAISSTLATQIPHAS 203 Query: 169 GIAFANKYRR------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 G A+A K + +I FG+GAA++G + NIAA + V++V NN YA+ Sbjct: 204 GAAYALKMQTLQNPDIPPRIVACYFGEGAASEGDFHAGLNIAATRSCPVVFVCRNNGYAI 263 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLT 281 T + RGV + I ++VDG DI AV M +A + G P++IE ++ Sbjct: 264 STPTLEQYRGDGIASRGVGYGIDTIRVDGNDIFAVYEAMREARRVALSDGGKPVLIEAMS 323 Query: 282 YRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YR HS SD + YR R E+ + + +PI ++RK L + +E ++E + R+ + Sbjct: 324 YRVSHHSTSDDSFAYRARVEVEDWKRRDNPIIRLRKWLENEGLWNE----DMERDTRESL 379 Query: 341 NNSV--EFAQSDKEPDPA 356 + EF +++E PA Sbjct: 380 RREILKEFGDAERELKPA 397 >gi|261251357|ref|ZP_05943931.1| branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit [Vibrio orientalis CIP 102891] gi|260938230|gb|EEX94218.1| branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit [Vibrio orientalis CIP 102891] Length = 368 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 24/302 (7%) Query: 39 LEGFEVSEFNKEQELSA----YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIV 93 +G V++ +LS Y+ M+L R ++ KA L G +G + HL G EA V Sbjct: 14 FQGESVNQLPAWADLSTLVRFYKDMVLTRTYDNKAVALQRTGKLGTYPSHL--GSEAYGV 71 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 + ++ D + YR+ + G+ K + G + +G H+ + +G Sbjct: 72 AIGHAMHPRDVFVPYYRDMPAMWVRGIPMEKNLQYWGGDE------RGSDFHV-TPSDGE 124 Query: 154 YGGHG-------IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 H + Q + G+A A K +V GDGA ++G ES N A Sbjct: 125 SPEHCRDLPFCVPIATQCTHAVGVAAALKIEHQHHAALVTCGDGATSKGDFLESINCAGA 184 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 WNL +++V+ NNQ+A+ + SA S + I G+ VDG DI AV + A+ Sbjct: 185 WNLPLVFVVNNNQWAISVPRALQSAAEFLSDKAKGAGIQGVTVDGNDIVAVHDCVLAALD 244 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL-HNKWA 324 R KGP +IE ++YR H+ +D A+ YR+ +E++E ++PI +++ L+ N W+ Sbjct: 245 RARKGKGPTLIEAISYRLSDHTTADDASRYRSNDELSEAW-QYEPIVRLKAYLVAKNAWS 303 Query: 325 SE 326 E Sbjct: 304 DE 305 >gi|15597443|ref|NP_250937.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Pseudomonas aeruginosa PAO1] gi|107101693|ref|ZP_01365611.1| hypothetical protein PaerPA_01002737 [Pseudomonas aeruginosa PACS2] gi|116050194|ref|YP_790989.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Pseudomonas aeruginosa UCBPP-PA14] gi|218891779|ref|YP_002440646.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Pseudomonas aeruginosa LESB58] gi|254235265|ref|ZP_04928588.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Pseudomonas aeruginosa C3719] gi|254240688|ref|ZP_04934010.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Pseudomonas aeruginosa 2192] gi|296389345|ref|ZP_06878820.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Pseudomonas aeruginosa PAb1] gi|81622360|sp|Q9I1M2|ODBA_PSEAE RecName: Full=2-oxoisovalerate dehydrogenase subunit alpha; AltName: Full=Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; Short=BCKDH E1-alpha gi|9948273|gb|AAG05635.1|AE004650_6 2-oxoisovalerate dehydrogenase (alpha subunit) [Pseudomonas aeruginosa PAO1] gi|115585415|gb|ABJ11430.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Pseudomonas aeruginosa UCBPP-PA14] gi|126167196|gb|EAZ52707.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Pseudomonas aeruginosa C3719] gi|126194066|gb|EAZ58129.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Pseudomonas aeruginosa 2192] gi|218772005|emb|CAW27784.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Pseudomonas aeruginosa LESB58] Length = 410 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 84/310 (27%), Positives = 139/310 (44%), Gaps = 10/310 (3%) Query: 18 NPSVSAKRAATSSVDCVDIPFLE--GFEVSEFNK----EQELSAYRLMLLIRRFEEKAGQ 71 P V + A TS + + L+ G V +N EQ L R ML R F+ + Sbjct: 37 KPPVDVEPAETSDLAYSLVRVLDDDGHAVGPWNPQLSNEQLLRGMRAMLKTRLFDARMLT 96 Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTG 131 + F C+G+EA+ ++L +GD YR+ G ++ ++ +L Sbjct: 97 AQRQKKLS-FYMQCLGEEAIATAHTLALRDGDMCFPTYRQQGILITREYPLVDMICQLLS 155 Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 + KG+ + S + GF+ G + Q G A+ + +I GDGA Sbjct: 156 NEADPLKGRQLPIMYSSKEAGFFSISGNLATQFIQAVGWGMASAIKGDTRIASAWIGDGA 215 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVD 250 + + + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++VD Sbjct: 216 TAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGTTFANRGVGCGIASLRVD 275 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHD 309 G D AV A + A R + GP +IE +TYR HS S DP+ YR ++ D Sbjct: 276 GNDFLAVYAASEWAAERARRNLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWTNFPLG-D 334 Query: 310 PIEQVRKRLL 319 PI ++++ ++ Sbjct: 335 PIARLKRHMI 344 >gi|48477621|ref|YP_023327.1| pyruvate dehydrogenase E1 component alpha subunit [Picrophilus torridus DSM 9790] gi|48430269|gb|AAT43134.1| pyruvate dehydrogenase E1 component alpha subunit [Picrophilus torridus DSM 9790] Length = 333 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 80/320 (25%), Positives = 157/320 (49%), Gaps = 10/320 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG--GFCHLCIGQEAVIVGMKMSLTEGD 103 + +KE +SAYR M+L R ++K L G+ G F IG EA+ + M++ + D Sbjct: 5 DISKEDIISAYRNMVLERFLDKK---LLGINRQGFLPFYIPNIGHEALHAAIGMAIRDDD 61 Query: 104 QMITAYREHGHILA-CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 YR+ G +A G+D ++A++ + G+ +H+ + VG Sbjct: 62 FFYPYYRDLGSDIARVGLDF--VLAQMFSTEMDNELGRDMPLHISNKAKRVGPVITTVGG 119 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + TG+A++ KY++ I + FGDGA + + S N AA+++L ++++ ENNQ+A+ Sbjct: 120 HLMAATGVAYSYKYQKKPGIVITTFGDGATSTPDFHVSMNFAAVYSLPLLFICENNQWAI 179 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 V + + SK+ ++ G+++DG + + A+ +K P++I+ +TY Sbjct: 180 SYPVEEQT-KVEISKKAEAYGFTGIKIDGNNFIEAYHAIRNAIKDVEKNKMPLLIDAVTY 238 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R H+ +D N + INE DP+ + + K ++ ++ I+ + +++ Sbjct: 239 RMGPHTTADDPNKYRKTIINE-GDPLDPLSIIEDDIKKMKILNDEEISNIKNEINNMVSK 297 Query: 343 SVEFAQSDKEPDPAELYSDI 362 VE + +P L+ +I Sbjct: 298 EVERYEKMNKPGKETLFKNI 317 >gi|67522539|ref|XP_659330.1| hypothetical protein AN1726.2 [Aspergillus nidulans FGSC A4] gi|40744856|gb|EAA64012.1| hypothetical protein AN1726.2 [Aspergillus nidulans FGSC A4] gi|259487067|tpe|CBF85442.1| TPA: hypothetical protein similar to 2-oxo acid dehydrogenase, E1 component alpha subunit (Eurofung) [Aspergillus nidulans FGSC A4] Length = 464 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 92/326 (28%), Positives = 148/326 (45%), Gaps = 29/326 (8%) Query: 48 NKEQELSAYRLMLLIR-----RFE-EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 + E+ L+ YR ML + FE ++ G+L F + G+E + VG +LT Sbjct: 103 SNEEALAWYRNMLTVSIMDVIMFEAQRQGRL-------SFYMVSAGEEGISVGSAAALTP 155 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D + YRE G G M++L +G+ +H + + Sbjct: 156 DDVVFAQYRETGVFQQRGFALKNFMSQLFANANDNGRGRNMPVHYGCEYPKTHTISSTLA 215 Query: 162 AQVSLGTGIAFANKYR------RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 Q+ +G A+A K + +I FG+GAA++G + NIAA + V+++ Sbjct: 216 TQIPQASGAAYALKLQALQNPDTPPRIVACYFGEGAASEGDFHAGLNIAATRSCPVVFIC 275 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 NN YA+ T + RGV + I ++VDG DI AV M A + G P Sbjct: 276 RNNGYAISTPTLEQYRGDGIASRGVGYGIDTIRVDGNDIFAVYEAMKAARTLALSQGGKP 335 Query: 275 IIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE-I 332 ++IE ++YR HS SD + YR R E+ + + +PI ++RK L +EG E + Sbjct: 336 VLIEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPIIRLRKWL-----ENEGIWNEDM 390 Query: 333 EMNVRKIINNSV--EFAQSDKEPDPA 356 E R+ I V EF ++++ PA Sbjct: 391 ERQARESIRKEVLREFGEAERAKKPA 416 >gi|312373197|gb|EFR20989.1| hypothetical protein AND_17788 [Anopheles darlingi] Length = 437 Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 80/309 (25%), Positives = 145/309 (46%), Gaps = 3/309 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M+L+ ++ + G + F G+EA +G +L+ D + YRE G + Sbjct: 97 FRDMVLLNTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAALSIEDWVYGQYREAGVL 155 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G S + + G KG+ +H S K F +G Q+ G A+A K Sbjct: 156 VWRGFTISDFINQCYGNAEDQGKGRQMPVHYGSRKLNFVTISSPLGTQIPQAAGAAYAFK 215 Query: 176 YRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + +++ CVV FG+GAA++G + +FN AA + VI+ NN +A+ T + Sbjct: 216 LQPNNQRCVVTYFGEGAASEGDTHAAFNFAATLDCPVIFFCRNNGFAISTPSAEQYRGDG 275 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + R + + ++ DG D+ A A Y PI++E + YR HS SD + Sbjct: 276 IAGRASGYGMAALRFDGTDVFATYNATKLAREYVLRENKPIVLEAMAYRIGHHSTSDDST 335 Query: 295 -YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR EE+ + PI +++ ++ W +E + E +VRK + + + ++ +P Sbjct: 336 AYRPAEELEVWNTVEHPITKLKHYMIRRGWFNEEEENEFVKSVRKQVLSQINQSERIPKP 395 Query: 354 DPAELYSDI 362 + E++ D+ Sbjct: 396 NWREMFQDV 404 >gi|254994509|ref|ZP_05276699.1| branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit) [Listeria monocytogenes FSL J2-064] Length = 265 Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 4/259 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 +++ + Y ML+ RR +E+ L G + F GQE +G + + D Sbjct: 8 LTEDKLIKMYETMLMARRLDERMWLLNRSGKIP-FTISGQGQETAQIGAAFAFDLDKDYA 66 Query: 106 ITAYREHGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YR+ +LA G+ A IM + + S G+ H N V Q Sbjct: 67 LPYYRDLAVVLAFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQF 126 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 GI A K + G+G++NQG +E N A++ L V++VI NNQYA+ Sbjct: 127 PHAAGIGLAAKMAGDEIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNNQYAISV 186 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S+ A S R + + IPG +VDG ++ V A +A R +GP +IE ++YR+ Sbjct: 187 PASKQYAAEKLSDRAIGYGIPGERVDGTNMGEVYAAFKRAADRARNGEGPTLIETVSYRF 246 Query: 285 RGH-SMSDPANYRTREEIN 302 H S D ++YR+REE++ Sbjct: 247 TPHSSDDDDSSYRSREEVD 265 >gi|294155658|ref|YP_003560042.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycoplasma crocodyli MP145] gi|291599966|gb|ADE19462.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycoplasma crocodyli MP145] Length = 372 Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 78/308 (25%), Positives = 143/308 (46%), Gaps = 13/308 (4%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGD 103 S+ + EQ + AY+ M+L R+ + QL G + F IG+EA+ V ++ + D Sbjct: 38 SQLSNEQLIEAYKWMVLSRQQDVYMLQLQRQGRMLTFAP-NIGEEALQVATAFAMDKKKD 96 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + A+R + +L GV M G + G K ++ + ++G+Q Sbjct: 97 WFLPAFRSNAAMLVLGVPIINQMIYWNGNEKGSIMPKDSNVMPVNI---------VIGSQ 147 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G+A+A K +++ + V G+G +G+ E N A + ++ + NNQ+A+ Sbjct: 148 ISHNAGVAYAMKQQKTGGVSVTFIGNGGTTEGEFAEGVNFATVHEWPAVFCVNNNQWAIS 207 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + + + + +F G+ VDG D+ A + +A+ Y R P+I+E LT+R Sbjct: 208 TPNYYETISSTIAAKAHAFGCAGVLVDGNDLLASYDVIKEAIDYARKESKPVIVEFLTWR 267 Query: 284 YRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 H+ SD P YRT E E +P+ ++ L K + +K+I + + Sbjct: 268 QGPHTTSDNPRIYRTEEHEKE-NEKWEPMHRIENYLKSQKELDDSKIKQIWEDALSKVKT 326 Query: 343 SVEFAQSD 350 + E + D Sbjct: 327 TYEESMKD 334 >gi|322792274|gb|EFZ16258.1| hypothetical protein SINV_01411 [Solenopsis invicta] Length = 433 Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 86/289 (29%), Positives = 136/289 (47%), Gaps = 16/289 (5%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EAV +G +LT D + YRE G +L G +K M + G KG+ +H Sbjct: 113 GEEAVQIGSAAALTLEDTIYAQYREAGVLLHRGYPLAKFMNQCYGNCEDDGKGRQMPVHY 172 Query: 147 FSTKNGFYGGHGIVGAQV----------SLGTGIAFANKYRRSDKICVVC-FGDGAANQG 195 S + F + Q+ S G A+A K + K CV C FG+GAA++G Sbjct: 173 GSKEFNFTTISSPLTTQLPQDSEIKVFTSAAVGCAYAFKLDKK-KACVACYFGEGAASEG 231 Query: 196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIR 255 + +FN AA + VI++ NN YA+ T V + +G ++ I ++VDG D+ Sbjct: 232 DAHAAFNFAATLSCPVIFLCRNNGYAISTPVREQLKGDGIAAKGPAYGINTIRVDGNDVL 291 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQV 314 A+ KA +C P++IE +TYR HS SD + YR EI + H P+ + Sbjct: 292 AMYFATKKAREFCIEQGKPVLIEAMTYRIGHHSTSDDSTAYRPTNEIAQWNV-HTPLMKF 350 Query: 315 RKRLLH-NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 R L W E + + + ++I++ E + K P L++D+ Sbjct: 351 RLYLESLGLWCQEREQELVNSTKKEILHVFREAGRKSK-PHWKNLFTDV 398 >gi|315182728|gb|ADT89641.1| hypothetical pyruvate dehydrogenase E1 component, alpha subunit [Vibrio furnissii NCTC 11218] Length = 363 Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 157/333 (47%), Gaps = 24/333 (7%) Query: 37 PFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGM 95 P E +VS YR MLL R ++ KA L G +G + HL G EA+ + + Sbjct: 21 PLPEWADVSTLT-----GFYRDMLLTRTYDHKAVALQRTGKLGTYPSHL--GAEAIGIAV 73 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 +L D + YR+ + A GV K + G + G +H Sbjct: 74 GRALKVDDVFVPYYRDMPAMWARGVGMEKNLQYWGGDERGSDFTPDEHVHCRDLPFCV-- 131 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + Q + G+A A K + + + +V GDG ++G E+ N A W++ +++V+ Sbjct: 132 ---PIATQCTHAVGVASALKIQGNHQAALVMCGDGGTSKGDFLEAINCAGAWHIPLVFVV 188 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI----RAVKATMDKAVAYCRAH 271 NNQ+A+ A S++ + IPG+ VDG DI AV+ ++D+A R Sbjct: 189 NNNQWAISVPRHLQCAADFLSQKALGAGIPGLTVDGNDIVAMYDAVRTSLDRA----RKG 244 Query: 272 KGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 KG +IE ++YR H+ +D A+ YR+ +E+ + +P+ +++ L+++ +E D + Sbjct: 245 KGATLIEAVSYRLSDHTTADDASRYRSDDELQQA-WQFEPVARLKTYLMNSGVWTEQDEE 303 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + + + ++ ++V+ D P P E D L Sbjct: 304 QWLDHCKDVVEHAVQ-RYLDLTPQPPEAAFDFL 335 >gi|294896764|ref|XP_002775720.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239881943|gb|EER07536.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 379 Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 77/318 (24%), Positives = 146/318 (45%), Gaps = 3/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F +Q L +M+ I +++ + G + F G+EA +G+ +L E D + Sbjct: 52 FTNDQALHILDIMIRINAYDQVLYDVQRQGRIT-FYMTNFGEEATQIGVVAALKEQDMIW 110 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YRE G L G ++ + KG+ +H + +G + Sbjct: 111 PQYRELGVFLYRGFTTQQVTDQCMSTMYDQGKGRQMPVHYCYPEGNIQAVSSPLGVNIPH 170 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 +G ++ K +D+ V FGDGAA++G + N A+L I+V NN YA+ T V Sbjct: 171 ASGAGYSFKLDNADRCAVTFFGDGAASEGDFATAINFASLMKSQTIFVCRNNGYAISTPV 230 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S + RG+++ I ++VDG D+ AV +A + +GP+++E++TYR Sbjct: 231 SEQYTGDGIAIRGIAYGIHSLRVDGNDVIAVYEATKRAREITISGEGPVLLELMTYRRGH 290 Query: 287 HSMSDPAN-YRTREEINE-MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HS SD ++ YR E+ + DPI + L++ ++ + + R + + + Sbjct: 291 HSTSDDSSRYRPDAEVQSWLLDGIDPISRYYNLLVNMGLITKEEFLNLGKKYRAEVLDCL 350 Query: 345 EFAQSDKEPDPAELYSDI 362 + + K+ ++++D+ Sbjct: 351 KVSAKHKKAPIIDMFNDV 368 >gi|291336120|gb|ADD95703.1| hypothetical protein [uncultured organism MedDCM-OCT-S01-C7] Length = 114 Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 61/114 (53%), Positives = 77/114 (67%), Gaps = 4/114 (3%) Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 E N+A LWNL VIY++ENN YAMGT+V RA+A +F KR + IPG++VDG ++ AV+ Sbjct: 3 EGMNMAKLWNLPVIYLLENNNYAMGTAVDRAAANPDFYKRYDT--IPGIRVDGHNVLAVR 60 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPI 311 M A Y GPI +E TYRY GHSMSDP +YR R+EI E+R N D I Sbjct: 61 EYMKFAKDYA-LENGPIFVEAKTYRYHGHSMSDPGTSYRDRQEIIEVRRNTDCI 113 >gi|78046032|ref|YP_362207.1| putative pyruvate dehydrogenase E1 alpha subunit [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325927723|ref|ZP_08188951.1| pyruvate dehydrogenase E1 component, alpha subunit [Xanthomonas perforans 91-118] gi|78034462|emb|CAJ22107.1| putative pyruvate dehydrogenase E1 alpha subunit [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325541924|gb|EGD13438.1| pyruvate dehydrogenase E1 component, alpha subunit [Xanthomonas perforans 91-118] Length = 362 Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 80/293 (27%), Positives = 139/293 (47%), Gaps = 11/293 (3%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N +Q L+ ++ ML +R F+ K+ L G +G + CIG EA VG+ S+ GD Sbjct: 32 NPQQLLALFKRMLFVRTFDTKSVALQRTGKLGTYAA-CIGHEATHVGIGASMRSGDVFAP 90 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YRE+G + GV ++ G + G + + + + Q Sbjct: 91 SYREYGTMFERGVRPRDVLLYWGGDERGSDYPRDADAAID------FPICVPISTQCLHA 144 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A + K + ++ V C GDG +++ Y + N A + L +I + NN +A+ S Sbjct: 145 AGSALSFKLQGKPQVAVACCGDGGSSKTDFYAALNSAGAYKLPLILCVINNGWAISVPRS 204 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + +++G++ + +QVDG D+ AV M +A A G +IE LTYR H Sbjct: 205 AQTGAQTLAQKGLAGGLQCLQVDGNDLVAVLEAMRQARVRALAGDGGTVIEFLTYRLSDH 264 Query: 288 SMSDPA-NYRTREEINEMRSNHDPIEQVRKRLL-HNKW-ASEGDLKEIEMNVR 337 + +D A YR EE+ + + +P+ ++R+ L W A++ D + E + R Sbjct: 265 TTADDARRYRGEEEVKQGWA-REPLLRLRRYLTAQGLWDAAQEDAWKAECSAR 316 >gi|289671149|ref|ZP_06492224.1| pyruvate dehydrogenase E1 alpha subunit [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 362 Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 80/308 (25%), Positives = 142/308 (46%), Gaps = 19/308 (6%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N +Q L+ ++ ML +R F+ K+ L G +G + CIG EA VG+ S+ GD Sbjct: 32 NPQQLLALFKRMLFVRTFDTKSVALQRTGKLGTYAA-CIGHEATHVGIGASMRSGDVFAP 90 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YRE+G + GV ++ G + G + + + + Q Sbjct: 91 SYREYGTMFERGVRPRDVLLYWGGDERGSDYPRDADAAID------FPICVPISTQCLHA 144 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A + K + ++ V C GDG +++ Y + N A + L +I + NN +A+ S Sbjct: 145 AGSALSFKLQGKPQVAVACCGDGGSSKTDFYAALNSAGAYKLPLILCVINNGWAISVPRS 204 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + +++G++ + +QVDG D+ AV M +A A G +IE LTYR H Sbjct: 205 AQTGAQTLAQKGLAGGLQCLQVDGNDLVAVLEAMRQARVRALAGDGGTVIEFLTYRLSDH 264 Query: 288 SMSDPA-NYRTREEINEMRSNHDPIEQVRKRLL---------HNKWASEGDLKEIEMNVR 337 + +D A YR EE+ + + +P+ ++R+ L + W +E + ++ V Sbjct: 265 TTADDARRYRGEEEVKQGWA-REPLLRLRRYLTAQGLWDAAQEDAWKAECSAR-VDEEVN 322 Query: 338 KIINNSVE 345 +N V+ Sbjct: 323 AYLNTPVQ 330 >gi|308499206|ref|XP_003111789.1| hypothetical protein CRE_03031 [Caenorhabditis remanei] gi|308239698|gb|EFO83650.1| hypothetical protein CRE_03031 [Caenorhabditis remanei] Length = 432 Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 82/307 (26%), Positives = 135/307 (43%), Gaps = 9/307 (2%) Query: 19 PSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMV 78 P++ R + D +D + F++E L Y+ M + + G + Sbjct: 57 PAIPIYRVTNAVGDVIDKS-----QDPNFDEETALKMYKTMTQLNIMDRILYDSQRQGRI 111 Query: 79 GGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK 138 F G+E VG +L D + YRE G +L G M + G + K Sbjct: 112 S-FYMTSFGEEGNHVGSAAALDANDLIYGQYREAGVLLWRGYSMENFMNQCYGNADDLGK 170 Query: 139 GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD-KICVVCFGDGAANQGQV 197 G+ MH + + F + Q+ G A+A K ++ + +I VV FGDGAA++G Sbjct: 171 GRQMPMHFGTKERNFVTISSPLTTQLPQAVGSAYAFKQQKDNQRIVVVYFGDGAASEGDA 230 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 + +FN AA +I+ NN YA+ T S + +G ++ + ++VDG D+ AV Sbjct: 231 HAAFNFAATLKCPIIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGNDLLAV 290 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRK 316 +A ++ P++IE +TYR HS SD + YR+ EE+ PI + K Sbjct: 291 YNATKEARRVALTNR-PVLIEAMTYRLGHHSTSDDSTAYRSAEEVETWGDKDHPITRFNK 349 Query: 317 RLLHNKW 323 + W Sbjct: 350 YISERGW 356 >gi|157118694|ref|XP_001653215.1| pyruvate dehydrogenase [Aedes aegypti] gi|108875637|gb|EAT39862.1| pyruvate dehydrogenase [Aedes aegypti] Length = 438 Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 82/309 (26%), Positives = 145/309 (46%), Gaps = 3/309 (0%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M+L+ ++ + G + F G+EA +G +L+ D + YRE G + Sbjct: 98 FRDMVLLNTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAALSPDDWVYGQYREAGVL 156 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G S + + G + KG+ +H S K F +G Q+ G A+A K Sbjct: 157 VWRGFTISDFINQCYGNREDEGKGRQMPVHYGSKKLNFVTISSPLGTQIPQAVGAAYAFK 216 Query: 176 YRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + ++ CV+ FG+GAA++G + +FN AA + VI NN +A+ T Sbjct: 217 RQPNNDRCVITYFGEGAASEGDAHAAFNFAATLDCPVILFCRNNGFAISTPSKEQYRGDG 276 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + R + I ++ DG DI AV +A Y H PI++E + YR HS SD ++ Sbjct: 277 IAGRAAGYGIAALRFDGTDIFAVYNATKQAREYVLKHNKPIVLEAMQYRISHHSTSDDSS 336 Query: 295 -YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR EE+ + PI +++ + W +E + ++ +RK + + ++ +P Sbjct: 337 AYRPAEELEIWNTVEHPISKLKNYMKQRDWFNEEEEEKYVKAIRKQVLAQINQSEKIPKP 396 Query: 354 DPAELYSDI 362 D E++ D+ Sbjct: 397 DWREVFQDV 405 >gi|330718614|ref|ZP_08313214.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Leuconostoc fallax KCTC 3537] Length = 365 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 83/300 (27%), Positives = 136/300 (45%), Gaps = 19/300 (6%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 +Q + + M+L R +++ +L G +G F GQEA V + D ++ Y Sbjct: 44 DQLVELMKQMVLSRTLNDRSTRLAKQGRLGFFAPTA-GQEASQVASNYAFDSEDYVMPGY 102 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+ ++ G+ K G G + F G++ I+GAQ G Sbjct: 103 RDVPQLVLKGLPIYKAFLWSRGHYEG---------NEFGDVKGWFP-QIIIGAQYVETAG 152 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 IA K R + GDG +QG YE N A + ++ ++NN +A+ T Sbjct: 153 IALGFKKRGKKNVAYTYTGDGGTSQGDFYEGMNFAGHYQAPAVFFVQNNGFAISTPRHTQ 212 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 +A + + +G + +P + VDGMD AV A + GP++IE LT R+ HSM Sbjct: 213 TAAKHLAAKGWAAGLPSIVVDGMDPLAVYLAAKTARQWA-LENGPVLIETLTNRFGPHSM 271 Query: 290 S--DPANYRTREEINEMRSNHDPIEQVRKRL----LHNKWASEGDLKEIEMNVRKIINNS 343 S DP YR++E+I+E DP+ + RK L L N+ E +KE+ + + + + Sbjct: 272 SGDDPLRYRSQEDIDEWL-KMDPLIRFRKYLGDKGLWNEKTEESWVKEVNQQIDEAVKQA 330 >gi|281211384|gb|EFA85549.1| 3-methyl-2-oxobutanoate dehydrogenase [Polysphondylium pallidum PN500] Length = 458 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 85/323 (26%), Positives = 150/323 (46%), Gaps = 13/323 (4%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F +E Y+ MLL+ + + G + F G+EA+ +G +L+ D + Sbjct: 107 FGQELVTKMYKQMLLLNTMDSIFYDVQRQGRIS-FYMTSFGEEAIHIGSAQALSMDDTIF 165 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YRE G ++ G +I + + KG+ +H S + + Q+ Sbjct: 166 AQYRESGVLMWRGFTLDEIANQCCSNELDPGKGRQMPVHFGSKRINVQTISSPLTTQLPQ 225 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G ++A K +V FG+GAA++G + + N AA + I+ NN++A+ T Sbjct: 226 AVGSSYAQKLAGEKNCTIVYFGEGAASEGDFHAAMNFAATLSTPTIFFCRNNKWAISTPA 285 Query: 227 SRASAQTNFSKRGVS-FNIPGMQVDGMDIRAV----KATMDKAVAYCRAHKG-PIIIEML 280 S + RG S + + +VDG DI AV K D AV KG P++IE + Sbjct: 286 SEQYRGDGIAGRGPSAYGMTTFRVDGNDIWAVYNVTKMARDIAV-----EKGVPVLIEAM 340 Query: 281 TYR-YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR + D + YRT EEIN + +P+ +++ ++ W +E K R+ Sbjct: 341 TYRVSHHSTSDDSSRYRTTEEINHWKEKKNPVNRLKNYMIRKGWWTEELEKSTIKESREQ 400 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 + +++ A++ K+P +EL++D+ Sbjct: 401 VKAALQKAEAQKKPMISELFTDV 423 >gi|121699642|ref|XP_001268089.1| 2-oxoisovalerate dehydrogenase complex alpha subunit, putative [Aspergillus clavatus NRRL 1] gi|119396231|gb|EAW06663.1| 2-oxoisovalerate dehydrogenase complex alpha subunit, putative [Aspergillus clavatus NRRL 1] Length = 522 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 14/285 (4%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + VG +LT D + YRE G G M++L + +G+ Sbjct: 195 FYMVSAGEEGISVGSAAALTPDDVVFVQYRETGVFQQRGFTLKDFMSQLFANRNDNGRGR 254 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR------RSDKICVVCFGDGAANQ 194 +H S + + Q+ +G A+A K + +I FG+GAA++ Sbjct: 255 NMPVHYGSNYPRTHTVSSPLATQIPQASGAAYALKLQALQNPDTPPRIVACYFGEGAASE 314 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + NIAA + V+++ NN YA+ T + RGV + I ++VDG DI Sbjct: 315 GDFHAGLNIAATRSCPVVFICRNNGYAISTPTLEQYRGDGIASRGVGYGIDTIRVDGNDI 374 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIE 312 AV M +A G P++IE ++YR HS SD + YR R E+ + + +PI Sbjct: 375 FAVHEAMREARRIALTDGGRPVLIEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDNPII 434 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSV--EFAQSDKEPDP 355 ++RK L + +E ++E R + +V EF +++E P Sbjct: 435 RLRKWLENEGLWNE----DLEQETRDALRKAVLKEFGDAEREKKP 475 >gi|225717454|gb|ACO14573.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial precursor [Caligus clemensi] Length = 431 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 88/320 (27%), Positives = 152/320 (47%), Gaps = 8/320 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++E+ + Y+ M L+ ++ + G + F G+EA VG ++ D + Sbjct: 83 LDQEELIRMYKSMTLLNTMDKILYESRRQGRIS-FYMTNYGEEATHVGSAAAMDSRDIVY 141 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YRE G ++ G+ IM + + KGK +H S F + Q+ Sbjct: 142 GQYRETGVLIHRGMTLENIMNQCYSNRLDQGKGKQMPVHYGSKDLNFVTISSPLATQMPQ 201 Query: 167 GTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A+A K R + + V+C FG+GAA++G + +FN AA +I+ NN YA+ T Sbjct: 202 AAGTAYAFK-RAQNGLAVICYFGEGAASEGDAHAAFNFAATLECPIIFFCRNNGYAISTP 260 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V + RG ++ + ++VDG D+ AV +A + + P++IE +TYR Sbjct: 261 VEEQFKGDGVAVRGPAYGMSTIRVDGNDLFAVYNATKEARSIAVRYNRPVLIEAMTYRIG 320 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HS SD ++ YR+ +E+ PI + L ++ KE + RK + + Sbjct: 321 HHSTSDDSSAYRSVDEVRYWDVKDHPITRFSLYLKDKGLWNDDMEKEWRKDARKQVLEA- 379 Query: 345 EFAQSDKEPDPA--ELYSDI 362 FA+++KE PA E++SD+ Sbjct: 380 -FAKAEKELKPAIKEMFSDV 398 >gi|152985298|ref|YP_001348354.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Pseudomonas aeruginosa PA7] gi|150960456|gb|ABR82481.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Pseudomonas aeruginosa PA7] Length = 410 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 84/310 (27%), Positives = 139/310 (44%), Gaps = 10/310 (3%) Query: 18 NPSVSAKRAATSSVDCVDIPFLE--GFEVSEFNK----EQELSAYRLMLLIRRFEEKAGQ 71 P V + A TS + + L+ G V +N EQ L R ML R F+ + Sbjct: 37 KPPVDVEPAETSDLAYSLVRVLDDDGNAVGPWNPQLSDEQLLRGMRAMLKTRIFDARMLT 96 Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTG 131 + F C+G+EA+ ++L +GD YR+ G ++ ++ +L Sbjct: 97 AQRQKKLS-FYMQCLGEEAIATAHTLALRDGDMCFPTYRQQGILVTREYPLVDMICQLLS 155 Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 + KG+ + S + GF+ G + Q G A+ + +I GDGA Sbjct: 156 NEADPLKGRQLPIMYSSKEAGFFSISGNLATQFIQAVGWGMASAIKGDTRIASAWIGDGA 215 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVD 250 + + + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++VD Sbjct: 216 TAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGTTFANRGVGCGIASLRVD 275 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHD 309 G D AV A + A R + GP +IE +TYR HS S DP+ YR ++ D Sbjct: 276 GNDFLAVYAASEWAAERARRNLGPTLIEWVTYRAGPHSTSDDPSKYRPADDWTNFPLG-D 334 Query: 310 PIEQVRKRLL 319 PI ++++ ++ Sbjct: 335 PIARLKRHMI 344 >gi|163839304|ref|YP_001623709.1| pyruvate dehydrogenase E1 component alpha subunit [Renibacterium salmoninarum ATCC 33209] gi|162952780|gb|ABY22295.1| pyruvate dehydrogenase E1 component alpha subunit [Renibacterium salmoninarum ATCC 33209] Length = 427 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 83/272 (30%), Positives = 127/272 (46%), Gaps = 13/272 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V++ E S Y M++IRR + +A L G + + L +GQEA +G +L + D Sbjct: 95 VADVTDEDLASLYEDMIVIRRIDTEATALQRQGELALWAPL-LGQEAAQIGSGRALEKDD 153 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +YRE+G G++ + G G G + F+ I+GAQ Sbjct: 154 FVFPSYRENGVAYVRGINLVNSLRIWRGNTHG-----GWDPYEFNMATP----QIIIGAQ 204 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A +D + FGDGA +QG V E+ AA + V++ +NN +A+ Sbjct: 205 TLHATGYAMGVVNDGADSAVITYFGDGATSQGDVNEAMIFAASFQAPVVFFCQNNHWAIS 264 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V A + R F IP M+VDG D+ AV A A+ R+ GP IE +TYR Sbjct: 265 EPVG-LQAHKAIADRAPGFGIPSMRVDGNDVLAVLAATRVALDRARSGGGPSFIEAVTYR 323 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQV 314 H+ + DP YR E+ + + DPI ++ Sbjct: 324 MGPHTTADDPTRYRDANELEDWAAK-DPIARL 354 >gi|163790332|ref|ZP_02184764.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Carnobacterium sp. AT7] gi|159874403|gb|EDP68475.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Carnobacterium sp. AT7] Length = 369 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 82/312 (26%), Positives = 141/312 (45%), Gaps = 15/312 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + +Q + M+ R E++ L G +G F GQEA + + + D Sbjct: 39 MPDLSDDQLVELMEKMVWSRILHERSMALARQGRLG-FYAPTAGQEASQLASHYAFVKED 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ SK A L R + ++ + Sbjct: 98 VLLPGYRDIPQLIQHGLPVSK--AFLWSRGHSVGNEYPADLNAVPPQI-----IIGAQII 150 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 ++G G+ K R + GDG ++QG YE N A + V++ ++NN YA+ Sbjct: 151 QAMGVGVGL--KIRGKQNVAFTYTGDGGSSQGDFYEGLNYAGAYKAPVVFFVQNNGYAIS 208 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + +A T +++ V+ IPG+QVDGMD AV A +A + A GP++IE +T R Sbjct: 209 TPRHKQTAATTLAQKAVAAGIPGVQVDGMDALAVYAVTKQAREWALAGNGPVLIETITSR 268 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 + HS S DP YR ++ + DP+ + R L SE E+ ++ I Sbjct: 269 FGPHSTSGDDPTRYRDKDSFD-YWEQRDPLIRFRNFLTEKGLWSEEKENELIEKTKEDIK 327 Query: 342 NSVEFAQSDKEP 353 SV+ ++D+ P Sbjct: 328 ASVK--EADQAP 337 >gi|260770221|ref|ZP_05879154.1| branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit [Vibrio furnissii CIP 102972] gi|260615559|gb|EEX40745.1| branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit [Vibrio furnissii CIP 102972] Length = 363 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 84/329 (25%), Positives = 154/329 (46%), Gaps = 16/329 (4%) Query: 37 PFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGM 95 P E +VS YR MLL R ++ KA L G +G + HL G EA+ + + Sbjct: 21 PLPEWADVSTLT-----GFYRDMLLTRTYDHKAVALQRTGKLGTYPSHL--GAEAIGIAV 73 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 +L D + YR+ + A G+ K + G + G +H Sbjct: 74 GRALKMDDVFVPYYRDMPAMWARGIGMEKNLQYWGGDERGSDFTPDEHVHCRDLPFCV-- 131 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + Q + G+A A K + + + +V GDG ++G E+ N A W++ +++V+ Sbjct: 132 ---PIATQCTHAVGVASALKIQGNHQAALVMCGDGGTSKGDFLEAINCAGAWHIPLVFVV 188 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 NNQ+A+ A S++ + IPG+ VDG DI A+ + ++ R KG Sbjct: 189 NNNQWAISVPRHLQCAADFLSQKALGAGIPGLTVDGNDIVAMYDAVRTSLERARKGKGAT 248 Query: 276 IIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 +IE ++YR H+ +D A+ YR+ +E+ + +P+ +++ L+++ +E D ++ Sbjct: 249 LIEAVSYRLSDHTTADDASRYRSDDELQQAW-QFEPVARLKTYLMNSGVWTEQDEEQWLD 307 Query: 335 NVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + + ++ ++V+ D P P E D L Sbjct: 308 HCKDVVEHAVQ-RYLDLTPQPPEAAFDFL 335 >gi|83766924|dbj|BAE57064.1| unnamed protein product [Aspergillus oryzae] Length = 394 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 93/354 (26%), Positives = 157/354 (44%), Gaps = 23/354 (6%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIR-----RFE-EKAG 70 +NPS + +D + + + S + E+ L+ Y+ ML + FE ++ G Sbjct: 4 INPSETTNIPTYRVMDSDGVLLDKNRKPSGVSNEEILTWYKNMLTVSVMDVIMFEAQRQG 63 Query: 71 QLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELT 130 +L F + G+E + VG +LT D + YRE G G M++L Sbjct: 64 RL-------SFYMVSAGEEGISVGSAAALTPDDVVFAQYRETGVFQQRGFTLKDFMSQLF 116 Query: 131 GRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICV 184 +G+ +H S + + Q+ +G A+A K +I Sbjct: 117 ANCHDNGRGRNMPVHYGSNYPRMHTISSPLATQIPQASGAAYALKLESLQNPDTPPRIVA 176 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 FG+GAA++G + NIAA + V+++ NN YA+ T + RGV + I Sbjct: 177 CYFGEGAASEGDFHAGLNIAATRSCPVVFICRNNGYAISTPTLEQYRGDGIASRGVGYGI 236 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEIN 302 ++VDG DI AV M +A + G P++IE ++YR HS SD + YR R E+ Sbjct: 237 DTIRVDGNDIFAVYEAMREARRIALSDGGKPVLIEAMSYRVSHHSTSDDSFAYRARVEVE 296 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 + + +PI ++RK L + E + +RK + EF ++++E P Sbjct: 297 DWKRRDNPIIRLRKWLENEGLWDEDTERTTREQLRKEVLK--EFGEAEREKKPP 348 >gi|37676681|ref|NP_937077.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio vulnificus YJ016] gi|37201224|dbj|BAC97047.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio vulnificus YJ016] Length = 364 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 9/276 (3%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGD 103 S ++E+ + YR ML+ R ++ KA L G +G + HL G EA VG+ +L D Sbjct: 24 SWASEERLVQFYRDMLITRAYDNKAVALQRTGKLGTYPSHL--GSEAFGVGIGHALKPSD 81 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 I YR+ + G+ K + G + G S H+ + F + Q Sbjct: 82 VFIPYYRDMPAMWVRGIGMEKNLQYWGGDERG-SDFCPEESHLRCSDLPFCVP---IATQ 137 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A A K + + +V GDGA ++G ES N A +W+L +++V+ NNQ+A+ Sbjct: 138 CTHAVGVASALKIQGNHDAALVTCGDGATSKGDFLESINCAGVWHLPLVFVVNNNQWAIS 197 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 A S++ IPG+ VDG D+ AV ++ A+ R KG +IE ++YR Sbjct: 198 VPRQLQCAADLLSEKAKGAGIPGITVDGNDVVAVYDAVNNALDRARKGKGATLIEAISYR 257 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 H+ +D A+ YR+ +E+ + ++PI++++ L Sbjct: 258 LSDHTTADDASRYRSADELKQAW-QYEPIKRLQAYL 292 >gi|152976386|ref|YP_001375903.1| pyruvate dehydrogenase (acetyl-transferring) [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025138|gb|ABS22908.1| Pyruvate dehydrogenase (acetyl-transferring) [Bacillus cytotoxicus NVH 391-98] Length = 371 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 88/276 (31%), Positives = 132/276 (47%), Gaps = 24/276 (8%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ R ++++ L G +G F GQEA + +L D ++ YR+ ++ Sbjct: 54 RRMVYTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHFALEAEDFILPGYRDVPQLV 112 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G+ + S+G M N I+GAQ+ G+A K Sbjct: 113 WHGLPLYQAFL--------FSRGHFMGNQMPENVNAL-PPQIIIGAQIIQTAGVALGMKL 163 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 R + + GDG A+QG YE N A + I+V++NN+YA+ T V + SA + Sbjct: 164 RGKKSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAISTPVEKQSAAKTVA 223 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH----KGPIIIEMLTYRYRGHSMS-- 290 ++ V+ I G+QVDGMD AV A A A+ R +GP +IE LT+RY H+M+ Sbjct: 224 QKAVAAGIYGIQVDGMDPLAVYA----ATAFARERAVNGEGPTLIETLTFRYGPHTMAGD 279 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNK--WA 324 DP YRT++ NE DPI + R L NK W+ Sbjct: 280 DPTRYRTKDIENEW-EQKDPIVRFRA-FLENKGLWS 313 >gi|312868994|ref|ZP_07729172.1| pyruvate dehydrogenase E1 component, alpha subunit [Lactobacillus oris PB013-T2-3] gi|311095497|gb|EFQ53763.1| pyruvate dehydrogenase E1 component, alpha subunit [Lactobacillus oris PB013-T2-3] Length = 368 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 17/285 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ F +Q + + M+ R E+ G +G F G+EA +G + + D Sbjct: 39 MANFTDDQLVDLMKKMVWERALHEQTMSFSQQGRLG-FYAPTWGEEASEMGTAAAFKKQD 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + AYR+ ++ G +++ G G ++F + I+GAQ Sbjct: 98 FLFPAYRDLPQLIQHGATVAQMYLWSKGHVKG---------NLFDARA--LRPQIIIGAQ 146 Query: 164 -VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V + G K D + G+G ++QG YE N A ++ +++I+NN +A+ Sbjct: 147 MVEMAGGALGIKKNGEKDTVAYAYTGEGGSSQGDTYEGMNFAGVFQAPAVFIIQNNGWAI 206 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +++GV+ IP +QVDGMD+ A +A + A GP++IE LTY Sbjct: 207 SYPRKLQTEAETIAQKGVAAGIPAVQVDGMDVLACYEVAKEAREFAAAGNGPVLIETLTY 266 Query: 283 RYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WA 324 R+ HS + DP+ YRT++E + + DP+ ++RK L K W+ Sbjct: 267 RFGAHSSAGDDPSRYRTKDE-EKPWFDKDPLIRLRKYLTEKKLWS 310 >gi|227529039|ref|ZP_03959088.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus vaginalis ATCC 49540] gi|227351051|gb|EEJ41342.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus vaginalis ATCC 49540] Length = 380 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 15/250 (6%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GF G+EA +G + + D + AYR+ ++ G +A++ G KG Sbjct: 86 GFYAPTWGEEASEMGTAAAFKKNDFLFPAYRDLPQLIQHGA----TVAQMYLWSKGYLKG 141 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQ-VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 +MF + I+GAQ V + G K D + G+G ++QG Y Sbjct: 142 -----NMFDARA--LRPQIIIGAQMVEMAGGALGIKKNGEKDAVAYAYTGEGGSSQGDTY 194 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 E N A + +++I+NN +A+ + +++GV+ IPG+QVDGMD+ A Sbjct: 195 EGMNFAGAFQAPAVFIIQNNGWAISFPRKLQTYAQTIAQKGVAAGIPGVQVDGMDVLACY 254 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRK 316 +A + A GP++IE LTYR+ HS + DP+ YRT+EE + + DP+ ++RK Sbjct: 255 EVAKEAREFAAAGNGPVLIETLTYRFGAHSSAGDDPSRYRTKEE-EKPWFDKDPLIRLRK 313 Query: 317 RLLHNKWASE 326 L SE Sbjct: 314 YLTKKGLWSE 323 >gi|194389886|dbj|BAG60459.1| unnamed protein product [Homo sapiens] Length = 448 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 89/346 (25%), Positives = 143/346 (41%), Gaps = 27/346 (7%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 71 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 129 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 130 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 189 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 190 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 249 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 250 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 309 Query: 283 -------------------------RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRK 316 R HS SD ++ YR+ +E+N PI ++R Sbjct: 310 SSSPILPPDPHSREPTLTWGPLPLCRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRH 369 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 LL W E K R+ + + E A+ +P+P L+SD+ Sbjct: 370 YLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDV 415 >gi|294627208|ref|ZP_06705795.1| pyruvate dehydrogenase E1 alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294667685|ref|ZP_06732897.1| pyruvate dehydrogenase E1 alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292598447|gb|EFF42597.1| pyruvate dehydrogenase E1 alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292602525|gb|EFF45964.1| pyruvate dehydrogenase E1 alpha subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 362 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 81/309 (26%), Positives = 142/309 (45%), Gaps = 21/309 (6%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N +Q L+ ++ ML +R F+ K+ L G +G + CIG EA VG+ S+ GD Sbjct: 32 NPQQLLALFKRMLFVRTFDTKSVALQRTGKLGTYA-ACIGHEATHVGIGASMRSGDVFAP 90 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM-FSTKNGFYGGHGIVGAQVSL 166 +YRE+G + GV ++ G + G + + F + Q Sbjct: 91 SYREYGTMFERGVRPRDVLLYWGGDERGSDYPRDADAAIDFPICVP-------ISTQCLH 143 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A + K + + V C GDG +++ Y + N A + L +I + NN +A+ Sbjct: 144 AAGSALSFKLQGKQHVAVACCGDGGSSKTDFYAALNSAGAYKLPLILCVINNGWAISVPR 203 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S + +++G++ + +QVDG D+ AV M +A A +G +IE LTYR Sbjct: 204 SAQTGAQTLAQKGLAGGLHCLQVDGNDLVAVLEAMRQARVRALAGEGGTVIEFLTYRLSD 263 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLL---------HNKWASEGDLKEIEMNV 336 H+ +D A YR EE+ + + +P+ ++R+ L + W +E + ++ V Sbjct: 264 HTTADDARRYRGEEEVKQGWAR-EPLLRLRRYLTAQGLWDEAQEDAWKAECSAR-VDEEV 321 Query: 337 RKIINNSVE 345 +N V+ Sbjct: 322 NAYLNTPVQ 330 >gi|238501638|ref|XP_002382053.1| 2-oxoisovalerate dehydrogenase complex alpha subunit, putative [Aspergillus flavus NRRL3357] gi|317142748|ref|XP_001819066.2| 2-oxoisovalerate dehydrogenase subunit alpha [Aspergillus oryzae RIB40] gi|220692290|gb|EED48637.1| 2-oxoisovalerate dehydrogenase complex alpha subunit, putative [Aspergillus flavus NRRL3357] Length = 443 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 93/354 (26%), Positives = 157/354 (44%), Gaps = 23/354 (6%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIR-----RFE-EKAG 70 +NPS + +D + + + S + E+ L+ Y+ ML + FE ++ G Sbjct: 53 INPSETTNIPTYRVMDSDGVLLDKNRKPSGVSNEEILTWYKNMLTVSVMDVIMFEAQRQG 112 Query: 71 QLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELT 130 +L F + G+E + VG +LT D + YRE G G M++L Sbjct: 113 RL-------SFYMVSAGEEGISVGSAAALTPDDVVFAQYRETGVFQQRGFTLKDFMSQLF 165 Query: 131 GRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICV 184 +G+ +H S + + Q+ +G A+A K +I Sbjct: 166 ANCHDNGRGRNMPVHYGSNYPRMHTISSPLATQIPQASGAAYALKLESLQNPDTPPRIVA 225 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 FG+GAA++G + NIAA + V+++ NN YA+ T + RGV + I Sbjct: 226 CYFGEGAASEGDFHAGLNIAATRSCPVVFICRNNGYAISTPTLEQYRGDGIASRGVGYGI 285 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEIN 302 ++VDG DI AV M +A + G P++IE ++YR HS SD + YR R E+ Sbjct: 286 DTIRVDGNDIFAVYEAMREARRIALSDGGKPVLIEAMSYRVSHHSTSDDSFAYRARVEVE 345 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 + + +PI ++RK L + E + +RK + EF ++++E P Sbjct: 346 DWKRRDNPIIRLRKWLENEGLWDEDTERTTREQLRKEVLK--EFGEAEREKKPP 397 >gi|126649798|ref|ZP_01722034.1| pyruvate dehydrogenase E1 component alpha subunit [Bacillus sp. B14905] gi|126593517|gb|EAZ87462.1| pyruvate dehydrogenase E1 component alpha subunit [Bacillus sp. B14905] Length = 371 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 13/262 (4%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + +L + D ++ YR+ I+ Sbjct: 55 MVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASHFALEQEDWILPGYRDVPQIVWH 113 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ K G G +G ++ I+GAQ G+A + R Sbjct: 114 GLPLDKAFLFSRGHFMGNQVPEGVNV---------LAPQIIIGAQFIQAAGVALGIQKRG 164 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + V GDG ++QG YE N A + I++++NNQYA+ T +A +++ Sbjct: 165 KKAVAVTYTGDGGSSQGDFYEGINFAGAFKSPAIFIVQNNQYAISTPRELQTAAKTIAQK 224 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 GV+ +P + VDGMD AV A +GP +IE + YRY H+M+ DP YR Sbjct: 225 GVAAGLPSILVDGMDALAVYVATRDARERAVNGEGPTLIETMCYRYGPHTMAGDDPTRYR 284 Query: 297 TREEINEMRSNHDPIEQVRKRL 318 T + E + DP+ + RK L Sbjct: 285 TSDTDTEW-AQKDPLVRFRKYL 305 >gi|27366905|ref|NP_762432.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Vibrio vulnificus CMCP6] gi|27358472|gb|AAO07422.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Vibrio vulnificus CMCP6] Length = 364 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 9/276 (3%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGD 103 S ++E+ + YR ML+ R ++ KA L G +G + HL G EA VG+ +L D Sbjct: 24 SWASEERLVQFYRDMLITRAYDNKAVALQRTGKLGTYPSHL--GSEAFGVGIGHALKPSD 81 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 I YR+ + G+ K + G + G S H+ + F + Q Sbjct: 82 VFIPYYRDMPAMWVRGIGMEKNLQYWGGDERG-SDFCPEESHLRCSDLPFCVP---IATQ 137 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A A K + + +V GDGA ++G ES N A +W+L +++V+ NNQ+A+ Sbjct: 138 CTHAVGVASALKIQGNHDAALVTCGDGATSKGDFLESINCAGVWHLPLVFVVNNNQWAIS 197 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 A S++ IPG+ VDG D+ AV ++ A+ R KG +IE ++YR Sbjct: 198 VPRQLQCAADLLSEKAKGAGIPGITVDGNDVVAVYDAVNNALDRARKGKGATLIEAISYR 257 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 H+ +D A+ YR+ +E+ + ++PI++++ L Sbjct: 258 LSDHTTADDASRYRSADELKQAW-QYEPIKRLQAYL 292 >gi|71746538|ref|XP_822324.1| 2-oxoisovalerate dehydrogenase subunit alpha [Trypanosoma brucei] gi|70831992|gb|EAN77496.1| 2-oxoisovalerate dehydrogenase alpha subunit, putative [Trypanosoma brucei] Length = 416 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 10/255 (3%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA +VG L D+ YRE G +L G + +++A+ G + KG+ Sbjct: 100 FYLTALGEEATVVGTAAGLEIRDEAFLQYREAGFLLYRGYNIPQLVAQCMGNVEDVLKGR 159 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD-------KICVVCFGDGAAN 193 +H S + + + Q+ G +A + + ++ VV FG+GAA+ Sbjct: 160 QMPIHYGSRELNVHMVSSPLATQIPHAAGAGYAFRLENEELSDESKSRVAVVIFGEGAAS 219 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 +G + N AA N ++V+ NN YA+ T RG+ + IP +VDG D Sbjct: 220 EGDFHGGVNFAAATGSNTLFVVRNNGYAISTPARVQYKGDGVLARGIGYGIPSARVDGQD 279 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIE 312 + A+ + +A R P++IE L YR + HS SD + YR+ +EI + P++ Sbjct: 280 VLAILQAVQQARQIIRTTNQPVLIEALCYRLQHHSSSDDSGMYRSSDEIENFLA-LSPLD 338 Query: 313 QVRKRLL-HNKWASE 326 + K L+ + W +E Sbjct: 339 RFEKFLVKRDLWTAE 353 >gi|254229417|ref|ZP_04922833.1| dehydrogenase E1 component superfamily [Vibrio sp. Ex25] gi|151938108|gb|EDN56950.1| dehydrogenase E1 component superfamily [Vibrio sp. Ex25] Length = 398 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 79/280 (28%), Positives = 134/280 (47%), Gaps = 8/280 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR M+L R ++ KA L G +G + HL G EA+ + + +L D + YR+ Sbjct: 69 YRDMVLTRTYDNKAVALQRTGKLGTYPSHL--GAEAIGIAVGRALKADDVFVPYYRDMPA 126 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + G+ K + G + G GS + S F + Q + G+A A Sbjct: 127 MWCRGIGMEKNLQYWGGDERGSDFAPEGS-PIPSRDLPFCVP---IATQCTHAVGVASAL 182 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + + + +V GDG ++G ES N A WN+ +++V+ NNQ+A+ S A Sbjct: 183 KIQGNHEAALVMCGDGGTSKGDFLESINCAGAWNIPLVFVVNNNQWAISVPRSLQCAADF 242 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S++ IPG+ VDG D+ AV A+ R KG +IE ++YR H+ +D A Sbjct: 243 LSEKAQGAGIPGITVDGNDVVAVYDATKTALERARKGKGATLIEAVSYRLSDHTTADDAT 302 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHN-KWASEGDLKEIE 333 +E+ + ++PI +++ LL+ W+ E + + +E Sbjct: 303 RYRKEDDVQTAWQYEPIARLKTYLLNQGAWSDEQEQQWLE 342 >gi|327189784|gb|EGE56928.1| 2-oxoisovalerate dehydrogenase alpha subunit protein [Rhizobium etli CNPAF512] Length = 410 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 81/284 (28%), Positives = 135/284 (47%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E L+ R M+ +R F+ + G F +G+EAV + +L +GD Sbjct: 72 LTDEDLLTGLRNMMKLRAFDARMLMAQRQGKTS-FYMQHLGEEAVSCAFRKALNKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A ++M ++ + G+ + S ++GF+ G + Q Sbjct: 131 PTYRQAGLLIADDYPMVEMMNQIYSNESDPLHGRQLPIMYSSKEHGFFTISGNLATQYVQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ + +I GDG+ + + + A+ + VI I NNQ+A+ T Sbjct: 191 AVGWAMASAIKNDSRIAAAWIGDGSTAESDFHSALVFASTYKAPVILNIVNNQWAISTFQ 250 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R + T F+ RG+ F IP ++VDG D AV A A R + GP +IE +TYR Sbjct: 251 GIARGGSGT-FAARGLGFGIPALRVDGNDYLAVHAVARWAAERARRNLGPTLIEHVTYRV 309 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL-HNKWASE 326 HS S DP+ YR + E +E DP+ +++K L+ W+ E Sbjct: 310 GAHSTSDDPSAYRPKTE-SEAWPLGDPVLRLKKHLIVKGAWSEE 352 >gi|301348476|ref|ZP_07229217.1| acetoin:DCPIP oxidoreductase alpha subunit [Acinetobacter baumannii AB056] Length = 160 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 92/159 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +EQ L+AY+ M IR FE++ + G + GF HL G+EAV VG+ +LT+ D + Sbjct: 2 QLTEEQLLAAYKRMRDIREFEDRLHEENTNGDIPGFIHLYSGEEAVAVGICENLTDKDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D +M E+ G+ G+ +GKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHCIAKGCDIHAMMLEIFGKDDGLCRGKGGSMHIADLDKGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 L G A K ++ + + GDG +NQG +E+ N+A Sbjct: 122 LAIGAALTAKTLKTGGVGLSFTGDGGSNQGLTFEAMNMA 160 >gi|221484179|gb|EEE22475.1| 2-oxoisovalerate dehydrogenase, putative [Toxoplasma gondii GT1] Length = 516 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 86/329 (26%), Positives = 153/329 (46%), Gaps = 6/329 (1%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 LEG F + + R+M+ + ++ + G + F G+EA +VG Sbjct: 148 LLEGPSSLPFPLDLGVRMLRVMIQSQVYDSTFYDIQRQGRIS-FYMTSFGEEASLVGSAA 206 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +L + D ++ YRE ++ G+ I+A+L + KG+ +H +T Sbjct: 207 ALHKDDLLLLQYRELSALMWRGLTLDDILAQLFATKNDPGKGRQMPVHYGATNVNMMPIC 266 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + ++ G G+ +A ++ + + VV FG+GAA++G FN AA +++ N Sbjct: 267 SPLAVKIPQGAGVGYAYTLQKKNAVAVVYFGEGAASEGDASVGFNFAATLGSQTLFLCRN 326 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N YA+ T V R V++ I ++VDG D+ AV A + A A + P + Sbjct: 327 NGYAISTPVGEQYKGDGVGARAVAYGIDTVRVDGTDLVAVYAAVKAARELVVAQRKPAFV 386 Query: 278 EMLTYRYRGHSMSDPAN-YRTREEINEMR-SNHDPIEQVRKRLLHN-KWASEGDLKEIEM 334 EM+TYR HS SD + YR+ EE+ + + S PI + L + +W++E + + M Sbjct: 387 EMMTYRIGHHSTSDESGAYRSAEEVEQWQASAAHPIRRFATFLTNQGRWSAEEE-SALVM 445 Query: 335 NVRKIINNSVEFAQSDKEPDPAE-LYSDI 362 RK + + + K P ++SD+ Sbjct: 446 ETRKEVLAKIRVHEKMKHPPVLSGIFSDV 474 >gi|91225779|ref|ZP_01260808.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio alginolyticus 12G01] gi|269968070|ref|ZP_06182107.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio alginolyticus 40B] gi|91189668|gb|EAS75943.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio alginolyticus 12G01] gi|269827316|gb|EEZ81613.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio alginolyticus 40B] Length = 398 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/280 (27%), Positives = 135/280 (48%), Gaps = 8/280 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR M+L R ++ KA L G +G + HL G EA+ + + +L D + YR+ Sbjct: 69 YRDMVLTRTYDNKAVALQRTGKLGTYPSHL--GAEAIGIAVGRALKADDVFVPYYRDMPA 126 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + G+ K + G + G GS +++ Y + Q + G+A A Sbjct: 127 MWCRGIGMEKNLQYWGGDERGSDFAPEGSP--VPSRDLPYCVP--IATQCTHAVGVASAL 182 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + + + +V GDG ++G ES N A WN+ +++V+ NNQ+A+ S A Sbjct: 183 KIQGNHEAALVMCGDGGTSKGDFLESINCAGTWNIPLVFVVNNNQWAISVPRSLQCAADF 242 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S++ IPG+ VDG D+ AV A+ R KG +IE ++YR H+ +D A Sbjct: 243 LSEKAQGAGIPGITVDGNDVVAVYDATKTALERARKGKGATLIEAVSYRLSDHTTADDAT 302 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHN-KWASEGDLKEIE 333 +E+ + ++PI +++ LL+ W+ E + + ++ Sbjct: 303 RYRKEDDVQTAWQYEPIARLKTYLLNQGAWSDEQEQQWLD 342 >gi|5705948|gb|AAB19268.2| branched-chain alpha-keto acid dehydrogenase complex E1 alpha subunit [Homo sapiens] Length = 387 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 82/297 (27%), Positives = 129/297 (43%), Gaps = 2/297 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 91 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 149 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 150 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 209 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 210 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 269 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 270 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 329 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 R HS SD ++ YR+ +E+N PI ++R LL W E K R+ Sbjct: 330 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRR 386 >gi|124512994|ref|XP_001349853.1| branched-chain alpha keto-acid dehydrogenase, putative [Plasmodium falciparum 3D7] gi|23615270|emb|CAD52260.1| branched-chain alpha keto-acid dehydrogenase, putative [Plasmodium falciparum 3D7] Length = 429 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 87/308 (28%), Positives = 147/308 (47%), Gaps = 14/308 (4%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI--GQEAVIVGM 95 L+G E + F E+ L Y+ M+ ++E YG+ G + G+E + GM Sbjct: 71 LLDGHE-APFKDEEVLKIYKDMVEFSIWDEI---FYGIQRQGRISFYIVNEGEEGLQFGM 126 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 +L+ D + YRE G +L+ G + I+ +L G + +GKG M + TK Sbjct: 127 GKALSVDDHLYCQYRETGVLLSRGFTYTDILNQLFGTK--YDEGKGRQMCICYTKKDL-N 183 Query: 156 GHGI---VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 H I +G+Q+S G +A K + + V GDG++++G Y + N A++ + Sbjct: 184 IHTITTPLGSQLSHAAGCGYALKLKNQKAVAVTYCGDGSSSEGDFYAALNFASVRQSQTM 243 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +V +NN YA+ TS+ + R ++ I ++VDG D+ A K C Sbjct: 244 FVCKNNLYAISTSIKDQYRGDGIAPRALALGIESIRVDGNDLFASYLATKKLRDICIQES 303 Query: 273 GPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNH-DPIEQVRKRLLHNKWASEGDLK 330 P+ IE ++YRY HS SD ++ YR +EE R PI ++ L + SE + + Sbjct: 304 KPVFIEFMSYRYGHHSTSDDSSLYRPKEENEAWRQEGVHPISRIFLYLKNKNLYSEKEDQ 363 Query: 331 EIEMNVRK 338 E +V++ Sbjct: 364 EHRKSVKE 371 >gi|229822332|ref|YP_002883858.1| dehydrogenase E1 component [Beutenbergia cavernae DSM 12333] gi|229568245|gb|ACQ82096.1| dehydrogenase E1 component [Beutenbergia cavernae DSM 12333] Length = 706 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 85/282 (30%), Positives = 135/282 (47%), Gaps = 22/282 (7%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + S Y+ M+++RR + +A L G + + L +GQEA +G +L GD Sbjct: 25 VEDVDDAALRSLYQDMVVVRRLDAEATALQRQGELALWPPL-LGQEAAQIGSARALRPGD 83 Query: 104 QMITAYREHGHILACGV---DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 + ++YREH GV D ++ LT S +++M + + I+ Sbjct: 84 FVFSSYREHAVAYVRGVAVVDLIRVWRGLTA-----SGWDPFAVNMATPQV-------II 131 Query: 161 GAQVSLGTGIAFANKY---RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GAQ TG A + + + V FGDGA ++G V E+ AA + V++V +N Sbjct: 132 GAQTLHATGYAMGVTFDGEAGNGDVAVTYFGDGAMSEGDVNEAMVFAASFRAPVVFVCQN 191 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 NQ+A+ S F+ R F IP ++VDG D+ A+ A +AVA GP + Sbjct: 192 NQWAISEPAGLQS-PVPFAGRAAGFGIPSVRVDGNDVLAMLAVTREAVARAANGGGPTFV 250 Query: 278 EMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 E +TYR H+ + DP YR E++ R DPI ++ L Sbjct: 251 EAVTYRMGPHTTADDPTRYRDAAELDAWR-RRDPITRLEAHL 291 >gi|116254745|ref|YP_770581.1| putative 2-oxoisovalerate dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] gi|115259393|emb|CAK10528.1| putative 2-oxoisovalerate dehydrogenase [Rhizobium leguminosarum bv. viciae 3841] Length = 410 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 154/330 (46%), Gaps = 18/330 (5%) Query: 12 DIKMALNPSVSAKRAATSSVDCVDIPF-------LEGFEVSEF----NKEQELSAYRLML 60 ++K+A SV +S D D+ + EG V + + E L+ R M+ Sbjct: 26 NVKIAKAGSVPRPEVDVASEDIRDLAYSIIRVLNREGEAVGPWAGSLSDEALLTGLRDMM 85 Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 +R F+ + G F +G+EAV + +L +GD YR+ G ++A Sbjct: 86 KLRAFDARMLMAQRQGKTS-FYMQHLGEEAVSCAFRKALEKGDMNFPTYRQAGLLIADDY 144 Query: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 ++M ++ + +G+ + S ++GF+ G + Q G A A+ + Sbjct: 145 PMVEMMNQIYSNESDPLRGRQLPIMYSSKEHGFFTISGNLATQYVQAVGWAMASAIKNDS 204 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT--SVSRASAQTNFSKR 238 +I GDG+ + + + A+ + VI I NNQ+A+ T ++R + T F+ R Sbjct: 205 RIAAAWIGDGSTAESDFHSALVFASTYKAPVILNIVNNQWAISTFQGIARGGSGT-FAAR 263 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRT 297 G+ F IP ++VDG D AV A A R + GP +IE +TYR HS S DP+ YR Sbjct: 264 GLGFGIPALRVDGNDYLAVHAVAHWAAERARRNLGPTLIEYVTYRVGAHSTSDDPSAYRP 323 Query: 298 REEINEMRSNHDPIEQVRKRLL-HNKWASE 326 + E +E DP+ +++K L+ W+ E Sbjct: 324 KTE-SEAWPLGDPVLRLKKHLIVKGAWSEE 352 >gi|91786184|ref|YP_547136.1| branched-chain alpha-keto acid dehydrogenase E1 component [Polaromonas sp. JS666] gi|91695409|gb|ABE42238.1| branched-chain alpha-keto acid dehydrogenase E1 component [Polaromonas sp. JS666] Length = 421 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 78/273 (28%), Positives = 125/273 (45%), Gaps = 8/273 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACG-VDASKIMAELTGRQGGISKG 139 F C+G+EA+ ++L GD YR+ G +LA VD +++ +L + KG Sbjct: 105 FYMQCLGEEAIATAHALALQPGDMCFPTYRQQGLLLARDDVDMVEMICQLMSNERDPLKG 164 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + + + GF+ G + Q G A+ + KI GDGA + + Sbjct: 165 RQLPVMYSYKRAGFFTISGNLATQFIQAVGWGMASAIKGDSKIASAWIGDGATAEADFHT 224 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVK 258 + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++VDG D AV Sbjct: 225 ALTFAHVYRAPVILNVVNNQWAISTCQAIAGGEATTFAARGVGCGIASLRVDGNDFLAVY 284 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKR 317 A A R++ GP +IE +TYR HS S DP+ YR ++ DPI +++ Sbjct: 285 AASLWAAERARSNLGPTLIEWVTYRGGAHSTSDDPSRYRPVDDWAHFPLG-DPIARLKAH 343 Query: 318 LLHN-KWAS---EGDLKEIEMNVRKIINNSVEF 346 L+ W E KE+E V + + + Sbjct: 344 LMQTGAWTEQEHEATQKELEAQVSAALKEAERY 376 >gi|261331994|emb|CBH14987.1| 2-oxoisovalerate dehydrogenase alpha subunit,putative [Trypanosoma brucei gambiense DAL972] Length = 416 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/255 (27%), Positives = 120/255 (47%), Gaps = 10/255 (3%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA +VG L D+ YRE G +L G +++A+ G + KG+ Sbjct: 100 FYLTALGEEATVVGTAAGLEIRDEAFLQYREAGFLLYRGYKIPQLVAQCMGNVEDVLKGR 159 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD-------KICVVCFGDGAAN 193 +H S + + + Q+ G +A + + ++ VV FG+GAA+ Sbjct: 160 QMPIHYGSRELNVHMVSSPLATQIPHAAGAGYAFRLENEELSDESKSRVAVVIFGEGAAS 219 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 +G + N AA N ++V+ NN YA+ T RG+ + IP +VDG D Sbjct: 220 EGDFHGGVNFAAATGSNTLFVVRNNGYAISTPTRVQYKGDGVLARGIGYGIPSARVDGQD 279 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIE 312 + A+ + +A R P++IE L YR + HS SD + YR+ +EI + P++ Sbjct: 280 VLAILQAVQQARQIIRTTNQPVLIEALCYRLQHHSSSDDSGMYRSSDEIENFLA-LSPLD 338 Query: 313 QVRKRLL-HNKWASE 326 + K L+ + W +E Sbjct: 339 RFEKFLVKQDLWTAE 353 >gi|262396878|ref|YP_003288731.1| branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit [Vibrio sp. Ex25] gi|262340472|gb|ACY54266.1| branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit [Vibrio sp. Ex25] Length = 364 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 8/288 (2%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMI 106 + E + YR M+L R ++ KA L G +G + HL G EA+ + + +L D + Sbjct: 27 DTETLVGFYRDMVLTRTYDNKAVALQRTGKLGTYPSHL--GAEAIGIAVGRALKADDVFV 84 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ + G+ K + G + G GS + S F + Q + Sbjct: 85 PYYRDMPAMWCRGIGMEKNLQYWGGDERGSDFAPEGS-PIPSRDLPFCVP---IATQCTH 140 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A A K + + + +V GDG ++G ES N A WN+ +++V+ NNQ+A+ Sbjct: 141 AVGVASALKIQGNHEAALVMCGDGGTSKGDFLESINCAGAWNIPLVFVVNNNQWAISVPR 200 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S A S++ IPG+ VDG D+ AV A+ R KG +IE ++YR Sbjct: 201 SLQCAADFLSEKAQGAGIPGITVDGNDVVAVYDATKTALERARKGKGATLIEAVSYRLSD 260 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHN-KWASEGDLKEIE 333 H+ +D A +E+ + ++PI +++ LL+ W+ E + + +E Sbjct: 261 HTTADDATRYRKEDDVQTAWQYEPIARLKTYLLNQGAWSDEQEQQWLE 308 >gi|312884133|ref|ZP_07743845.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio caribbenthicus ATCC BAA-2122] gi|309368181|gb|EFP95721.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio caribbenthicus ATCC BAA-2122] Length = 368 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 86/313 (27%), Positives = 146/313 (46%), Gaps = 23/313 (7%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 ++ Y+ M+L R ++ KA L G +G + HL G EA +G+ +L D + YR+ Sbjct: 32 ITFYKDMVLTRTYDNKAVALQRTGKLGTYPSHL--GAEAFGIGIGHALHPRDVFVPYYRD 89 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG-------IVGAQV 164 + G+ K + G + +G ++ T G H + Q Sbjct: 90 MPAMWVRGIPMEKNLQYWGGDE------RGSDFNVMPTDGG-QPEHCNDLPFCVPIATQC 142 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + G+A A K +V GDGA ++ ES N A WNL +++VI NNQ+A+ Sbjct: 143 THAVGVASALKIDNHHHAALVTCGDGATSKADFLESINCAGAWNLPLVFVINNNQWAISV 202 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + S+ S + I G+ VDG D+ AV ++ A+ R KGP +IE ++YR Sbjct: 203 PRALQSSAEFLSDKAKGAGIRGITVDGNDVVAVHDSVRIALDRARKGKGPTLIEAVSYRL 262 Query: 285 RGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL-HNKWAS---EGDLKEIEMNVRKI 339 H+ +D A YR++ E+ E + +P+++++ L+ W+ E LKE + V K Sbjct: 263 SDHTTADDATRYRSKAELQEAW-DFEPVKRLKAFLVAQGVWSDFHEEQWLKECKHMVEKA 321 Query: 340 INNSVEFAQSDKE 352 ++N + E Sbjct: 322 VDNYINLPPQAPE 334 >gi|75764774|ref|ZP_00744167.1| Pyruvate dehydrogenase E1 component alpha subunit [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74487737|gb|EAO51560.1| Pyruvate dehydrogenase E1 component alpha subunit [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 265 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 104/192 (54%), Gaps = 15/192 (7%) Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A K R + + GDG A+QG YE N A + I+V++NN+YA+ T V + Sbjct: 50 GVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAISTPVEK 109 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH----KGPIIIEMLTYRY 284 SA +++ V+ I G+QVDGMD AV A A A+ R +GP +IE LT+RY Sbjct: 110 QSAAKTVAQKAVAAGIYGIQVDGMDPLAVYA----ATAFARERAVNGEGPTLIETLTFRY 165 Query: 285 RGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDLKEIEMNVRKIIN 341 H+M+ DP YRT++ NE DPI + RK L W+ E + IE ++ I Sbjct: 166 GPHTMAGDDPTRYRTKDIENEWEQK-DPIVRFRKFLEAKGLWSQEVEETVIE-EAKEDIK 223 Query: 342 NSVEFAQSDKEP 353 ++ A++D+ P Sbjct: 224 QAI--AKADQAP 233 >gi|320167657|gb|EFW44556.1| branched chain keto acid dehydrogenase E1 [Capsaspora owczarzaki ATCC 30864] Length = 437 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 3/279 (1%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EA +G +L + D + YRE G ++ G + M + KG+ +H Sbjct: 127 GEEATHIGSAAALDDRDMVFGQYREAGVLMWRGFTLDEFMNQCYSNSKDPGKGRQMPVHY 186 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAA 205 S + F + Q+ G A+A K R + + V+C FG+GAA++G + +FNIA+ Sbjct: 187 GSKRLNFQTISSPLATQMPQAAGAAYAFK-RAGNGLAVICYFGEGAASEGDAHAAFNIAS 245 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + I+ NN YA+ T + RG + I ++VDG D+ AV A Sbjct: 246 TTDAPCIFFCRNNGYAISTPTRDQYRGDGIASRGAGYGIDTIRVDGNDVFAVYNATKAAR 305 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 + P++IE +TYR HS SD ++ YR E+N PI ++R + Sbjct: 306 KFAVEQNRPVLIEAMTYRVGHHSTSDDSSAYRQATEVNRWVKEDHPITRLRLYMEKKGLW 365 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 E + ++ R + + + A+++ +P L++D+ Sbjct: 366 DEAREQALKKEARAQVLDHFQKAETELKPAIKHLFTDVF 404 >gi|320158785|ref|YP_004191163.1| branched-chain alpha-keto acid dehydrogenase, E1 component, subunit alpha [Vibrio vulnificus MO6-24/O] gi|319934097|gb|ADV88960.1| branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit [Vibrio vulnificus MO6-24/O] Length = 364 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 89/326 (27%), Positives = 155/326 (47%), Gaps = 13/326 (3%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGD 103 S ++E+ + YR ML+ R ++ KA L G +G + HL G EA VG+ +L D Sbjct: 24 SWASEERLVQFYRDMLITRAYDNKAVALQRTGKLGTYPSHL--GSEAFGVGIGHALKPSD 81 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 I YR+ + G+ K + G + G S H+ + F + Q Sbjct: 82 VFIPYYRDMPAMWVRGIGMEKNLQYWGGDERG-SDFCPEESHLRCSDLPFCVP---IATQ 137 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A A K + + +V GDGA ++G ES N A +W+L +++V+ NNQ+A+ Sbjct: 138 CTHAVGVASALKIQGNHDAALVTCGDGATSKGDFLESINCAGVWHLPLVFVVNNNQWAIS 197 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 A S++ IPG+ VDG D+ AV ++ A+ R KG +IE ++YR Sbjct: 198 VPRQLQCAADLLSEKAKGAGIPGITVDGNDVVAVYDAVNNALDRARKGKGATLIEAISYR 257 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL----LHNKWASEGDLKEIEMNVRK 338 H+ +D A+ YR+ +E+ + ++PI++++ L L N+ + L + V + Sbjct: 258 LSDHTTADDASRYRSADELKQAWL-YEPIKRLQAYLTAQGLWNEELEQQWLAHCKQQVEQ 316 Query: 339 IINNSVEFAQSDKEPDPAELYSDILI 364 + + + E LY+ + I Sbjct: 317 AVAHYLSLPPQAPESAFDYLYASLPI 342 >gi|289762665|ref|ZP_06522043.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis GM 1503] gi|289710171|gb|EFD74187.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis GM 1503] Length = 284 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 13/228 (5%) Query: 93 VGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKN 151 +G L + D + YRE G L G+ + G GG+ F+TK Sbjct: 1 MGAAACLRKTDWLFPQYRELGVYLVRGIPPGHVGVAWRGTWHGGLQ---------FTTKC 51 Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 I G Q G A A + D + V GDGA ++G V+E+ N AA++ Sbjct: 52 CAPMSVPI-GTQTLHAVGAAMAAQRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPC 110 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 ++ ++NNQ+A+ VSR +A + + + + + +PG++VDG D+ A A M +A A RA Sbjct: 111 VFYVQNNQWAISMPVSRQTAAPSIAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAG 170 Query: 272 KGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 GP +IE +TYR H+ + DP YR++EE++ + DPI + R L Sbjct: 171 DGPTLIEAVTYRLGPHTTADDPTRYRSQEEVDRW-ATLDPIPRYRTYL 217 >gi|198435681|ref|XP_002130232.1| PREDICTED: similar to Branched chain ketoacid dehydrogenase E1, alpha polypeptide [Ciona intestinalis] Length = 442 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 6/280 (2%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EA +G +L D + YRE G ++ G + M + + GK +H Sbjct: 131 GEEAAHIGSAAALEMKDLVFAQYREAGVLMWRGFRLDQFMDQCYANINDPASGKQMPVHY 190 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAA 205 S F + Q+ G A+A K R + CV+C FG+GAA++G + +FN AA Sbjct: 191 GSKDLNFVTISSPLATQMPQAAGAAYALK-RTNPGTCVICYFGEGAASEGDAHAAFNFAA 249 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + I+ NN YA+ T + RG + + ++VDG D AV KA Sbjct: 250 TLDAPCIFFCRNNGYAISTPAHEQYRGDGIASRGSGYGMLTIRVDGNDTLAVYNATRKAR 309 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLH--NK 322 P++IE +TYR HS S D + YRT E+ ++P+ + + + + N Sbjct: 310 QIALEESRPVLIEAMTYRVGDHSTSDDSSTYRTAGELEYWTKTNNPVTRFERYITNERNC 369 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 W++E D K + + K + + A+ +P P+ +++D+ Sbjct: 370 WSAEEDEK-LSKDCSKQVIEAFTAAEKRLKPSPSLVFTDV 408 >gi|331230249|ref|XP_003327789.1| branched chain alpha-keto acid dehydrogenase E1-alpha subunit [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309306779|gb|EFP83370.1| branched chain alpha-keto acid dehydrogenase E1-alpha subunit [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 441 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 93/356 (26%), Positives = 163/356 (45%), Gaps = 23/356 (6%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 LNP + K + + D+ LE N+ + Y +ML + + L G Sbjct: 59 LNP-IGKKNSNDQHIGLPDLAQLE-------NESFAVKVYEVMLGLPILDTFMSNLQRHG 110 Query: 77 MVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR-QGG 135 + F G+E +VG +L + D++ YRE G +L G + A+ G + Sbjct: 111 RIS-FYMTSYGEEGAVVGSAAALGDHDEVFAQYREQGILLWRGCSLDYLTAQCFGSVEDE 169 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA-----NKYRRSDKICVVCF-GD 189 SKG+ +H S K+ F+ + Q+ G A+A K R D CVVC+ G+ Sbjct: 170 SSKGRQMPVHYASKKHHFHSISSPLATQIPQAAGAAYALKRMRQKGERPDD-CVVCYLGE 228 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 GAA++G + N+A++ +++ I NN +A+ T S+ + R + I ++V Sbjct: 229 GAASEGDFHAGVNMASVLGGPIVFFIRNNGFAISTPSSQQFKGDGIASRAAGYGIDAIRV 288 Query: 250 DGMDIRAVKATMDKAVAYCRAHKG---PIIIEMLTYRYRGHSMSDPAN-YRTREEINEMR 305 DG D AV +A RA +G +++E +TYR HS SD ++ YR E+++ R Sbjct: 289 DGNDPLAVYLATREARR--RALEGAGRAVMVEAMTYRVGHHSTSDDSSAYRNPNEVDQWR 346 Query: 306 SNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 +PI ++R L W ++ + I+ SV+ + +P ++++D Sbjct: 347 KRDNPINRMRAFLESKGWWDPAKEEDRIKQWKNDISKSVKRTEKMSKPSLKDMWTD 402 >gi|297625420|ref|YP_003687183.1| 2-oxoisovalerate dehydrogenase subunit alpha (branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921185|emb|CBL55734.1| 2-oxoisovalerate dehydrogenase subunit alpha (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 370 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 82/285 (28%), Positives = 131/285 (45%), Gaps = 23/285 (8%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E + E + R M RRF+ + L G +G + L GQEA + + D + Sbjct: 28 EGSDEDLVDMLRQMTTARRFDVEGAALQRHGELGLWAPLS-GQEAYQAAVTKVMKPQDMV 86 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH-GIVGAQV 164 YRE L GV I+A +G S+ + + + I+GAQ Sbjct: 87 FGTYREQSIALQKGVPLGDILAVW----------RGSSLSRWIASDAQVAPYYMIIGAQP 136 Query: 165 SLGTGIAFANKYRRS--------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 G A ++ D + + +GDGA++QG V E+ AA V+++ Sbjct: 137 LHAVGYAMGVARDKAKHPTDPANDAVTLTIYGDGASSQGDVNEALVFAASQQAPVVFLNV 196 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ+A+ + S + +R + F IPG++VDG D A A ++ A R+ GP++ Sbjct: 197 NNQWAI-SEPSSVQTRIPLYQRAMGFGIPGIRVDGNDPLACHAVLNWAFDEVRSGSGPVL 255 Query: 277 IEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLH 320 +E +TYR H+ S DP YR+ + E ++ DPIE++R LL Sbjct: 256 VEAVTYRMGPHTTSDDPTKYRSSQVTEEWKAK-DPIERLRSYLLE 299 >gi|254467417|ref|ZP_05080827.1| 2-oxoisovalerate dehydrogenase, alpha subunit [Rhodobacterales bacterium Y4I] gi|206684418|gb|EDZ44901.1| 2-oxoisovalerate dehydrogenase, alpha subunit [Rhodobacterales bacterium Y4I] Length = 411 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 82/274 (29%), Positives = 128/274 (46%), Gaps = 7/274 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R ML +R F+ + G F +G+EAV +L GD YR+ G ++ Sbjct: 83 RHMLTLRTFDARMMNAQRQGKTS-FYMQHLGEEAVSCAFSRALRPGDMNFPTYRQAGLLI 141 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 A G +M ++ G+ + S ++GF+ G +G Q G A A+ Sbjct: 142 AGGYPMLTMMNQIYSNADDPLHGRQLPIMYSSKEHGFFSISGNLGTQFVQSVGWAMASAI 201 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT--SVSRASAQTN 234 KI GDG+ + + + A+ ++ V+ I NNQ+A+ T ++R T Sbjct: 202 SGDTKIATGWIGDGSTAESDFHAAMVFASTYSAPVVLNIVNNQWAISTFQGIARGGVGT- 260 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 F+ RG F I ++VDG D AV A A R GP +IE +TYR GHS S DP+ Sbjct: 261 FAARGHGFGIASIRVDGNDYLAVHAVAKWACERARRGHGPTLIEHVTYRAGGHSTSDDPS 320 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLH-NKWASE 326 YR++ E DPIE+++K L+ +W+ + Sbjct: 321 AYRSKSEAAAWPLG-DPIERLKKHLIAIGEWSED 353 >gi|99082618|ref|YP_614772.1| branched-chain alpha-keto acid dehydrogenase E1 component [Ruegeria sp. TM1040] gi|99038898|gb|ABF65510.1| branched-chain alpha-keto acid dehydrogenase E1 component [Ruegeria sp. TM1040] Length = 413 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E+ R M+L+R F+ + G F +G+EAV +L +GD Sbjct: 75 LSPEELREGLRDMMLLRAFDARMLNAQRQGKTS-FYMQHLGEEAVSCAFSRALKDGDMNF 133 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ G+ + S ++GF+ G +G Q Sbjct: 134 PTYRQAGLLIARDYPLVTMMNQIYSNADDPLHGRQLPIMYSSKEHGFFSISGNLGTQFVQ 193 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ +N V+ I NNQ+A+ T Sbjct: 194 AVGWAMASAISGDTKIAAGWIGDGSTAESDFHAAMVFASTYNAPVVLNIVNNQWAISTFQ 253 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R T F+ RG F I ++VDG D AV A A R GP +IE +TYR Sbjct: 254 GIARGGVGT-FAARGHGFGIASIRVDGNDYLAVNAVAKWAAERARLGLGPTLIEHVTYRA 312 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLH-NKWASE 326 GHS S DP+ YR+ +E DPI+++++ L+ +W+ E Sbjct: 313 GGHSTSDDPSAYRSADE-GAAWPLGDPIDRLKRHLIRIGEWSEE 355 >gi|259417175|ref|ZP_05741094.1| 2-oxoisovalerate dehydrogenase subunit alpha [Silicibacter sp. TrichCH4B] gi|259346081|gb|EEW57895.1| 2-oxoisovalerate dehydrogenase subunit alpha [Silicibacter sp. TrichCH4B] Length = 413 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 82/284 (28%), Positives = 131/284 (46%), Gaps = 7/284 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+L+R F+ + G F +G+EAV +L +GD Sbjct: 75 LTPEELREGLRDMMLLRAFDARMQNAQRQGKTS-FYMQHLGEEAVSCAFSRALQDGDMNF 133 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ G+ + S ++GF+ G +G Q Sbjct: 134 PTYRQAGLLIARDYPLVTMMNQIYSNADDPLHGRQLPIMYSSKEHGFFSISGNLGTQFVQ 193 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT-- 224 G A A+ KI GDG+ + + + A+ +N V+ I NNQ+A+ T Sbjct: 194 AVGWAMASAISGDTKIAAGWIGDGSTAESDFHAAMVFASTYNAPVVLNIVNNQWAISTFQ 253 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++R T F+ RG F I ++VDG D AV A A R GP +IE +TYR Sbjct: 254 GIARGGVGT-FAARGHGFGIASIRVDGNDYLAVNAVAKWAAERARLGLGPTLIEHVTYRA 312 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLH-NKWASE 326 GHS S DP+ YR+ +E DPI+++++ L+ +W+ E Sbjct: 313 GGHSTSDDPSAYRSADE-GAAWPLGDPIDRLKRHLIRIGEWSDE 355 >gi|332284089|ref|YP_004416000.1| 3-methyl-2-oxobutanoate dehydrogenase [Pusillimonas sp. T7-7] gi|330428042|gb|AEC19376.1| 3-methyl-2-oxobutanoate dehydrogenase [Pusillimonas sp. T7-7] Length = 410 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 71/241 (29%), Positives = 118/241 (48%), Gaps = 3/241 (1%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ V ++L++GD +YR+ ++A V +M +L G KG+ Sbjct: 105 FYMQSLGEEAIGVAQMLALSKGDMCFPSYRQQNLLIAQDVPLFDMMCQLFSNDGDRLKGR 164 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 + ++GF+ G + Q G A A+ + KI GDGA + Sbjct: 165 QLPVMYSMREHGFFSISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAAADFQTA 224 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKA 259 A ++ VI + NNQ+A+ + + A + T F++RGV I ++VDG D AV A Sbjct: 225 LTFAHVYRAPVILNVINNQWAISSFQALAGGESTTFAERGVGSGIASLRVDGNDFLAVHA 284 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 AV R + GP +IE ++YR HS S DP+ YR ++ DPI+++++ L Sbjct: 285 ASKWAVERARGNLGPTLIEWVSYRAGPHSTSDDPSKYRPADDWARFPLG-DPIDRLKRHL 343 Query: 319 L 319 + Sbjct: 344 I 344 >gi|328957241|ref|YP_004374627.1| pyruvate dehydrogenase E1 component subunit alpha [Carnobacterium sp. 17-4] gi|328673565|gb|AEB29611.1| pyruvate dehydrogenase E1 component subunit alpha [Carnobacterium sp. 17-4] Length = 369 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 76/277 (27%), Positives = 126/277 (45%), Gaps = 13/277 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + +Q + M+ R E++ L G +G F GQEA + + + D Sbjct: 39 MPDLSDDQLVELMEKMVWSRILHERSMALARQGRLG-FYAPTAGQEASQLASHYAFEKED 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ SK A L R + +H + Sbjct: 98 ELYPGYRDIPQLIQHGLPISK--AFLWSRGHSVGNEYPEDLHAVPPQI-----IIGAQII 150 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 ++G GI K R + GDG ++QG YE N A + V++ ++NN YA+ Sbjct: 151 QAMGAGIGL--KKRGKQNVAFTYTGDGGSSQGDFYEGLNFAGAYKAPVVFFVQNNGYAIS 208 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + +A T +++ V+ IPG+QVDGMD AV A +A + A GP++IE +T R Sbjct: 209 TPRHKQTAATTLAQKAVAAGIPGVQVDGMDPLAVYAVTKQAREWAVAGNGPVLIETITSR 268 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRL 318 + HS S DP YR ++ + DP+ + R L Sbjct: 269 FGPHSTSGDDPTRYRDQDSFDYWE-QRDPLIRFRNFL 304 >gi|326387809|ref|ZP_08209415.1| branched-chain alpha-keto acid dehydrogenase E1 component [Novosphingobium nitrogenifigens DSM 19370] gi|326207855|gb|EGD58666.1| branched-chain alpha-keto acid dehydrogenase E1 component [Novosphingobium nitrogenifigens DSM 19370] Length = 430 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 79/295 (26%), Positives = 141/295 (47%), Gaps = 4/295 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 RLM L R F+ + + G F G+EA V ++L + D + YR+ G ++ Sbjct: 83 RLMALTRAFDARMVRAQRQGKTS-FYMKSTGEEATAVATALALADDDMVFPTYRQQGLLI 141 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 A G +++ ++ + KG+ + + + G + Q+ G A A+ Sbjct: 142 ARGYPLVEMVDQIFSNRADRLKGRQLPIMYSARAQSVFSISGNLATQIPQAVGWAMASAI 201 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNF 235 R +I G+G++ +G + AA+++ V+ + NNQ+A+ + A A+ T F Sbjct: 202 RGDSRIATAFVGEGSSAEGDFHSGLTFAAVYHAPVVINLVNNQWAISSFSGFAGAERTTF 261 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + R + + I G++VDG D AV A + A RA+ GP +IE TYR GHS S DP Sbjct: 262 AARAIGYGIAGLRVDGNDPLAVFAAVRWAADRARANAGPTLIEHFTYRAEGHSTSDDPGQ 321 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 YR+ E E DP++++ + L+ G +++ V + ++V A++ Sbjct: 322 YRSAAERTEWPLG-DPVDRLMRHLVTLGVWDAGQQADMDAAVDAEVRDAVRAAEA 375 >gi|322498906|emb|CBZ33979.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 479 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 77/293 (26%), Positives = 128/293 (43%), Gaps = 24/293 (8%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F G+EA ++G L D++ YRE G + G + +A+ G KG+ Sbjct: 149 FYMTMFGEEAAVIGAAAGLASNDELFAQYREAGILTYRGYTIPEFIAQCMGNCECDLKGR 208 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY------RR-----------SDKIC 183 +H S + + Q+ G G +A + RR +IC Sbjct: 209 QMPIHYGSKRLNAQMVSSPLATQIPHGAGAGYAFRLENQALERRLPTGTLLSTIPEARIC 268 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 FG+GAA++G + N A+ + ++ + NN YA+ T R V + Sbjct: 269 ATFFGEGAASEGDFHAGLNFASTVGSHTLFFVRNNGYAISTPTHSQYMGDGILSRAVGYG 328 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEIN 302 +P +VDG+D AV T+ KA + P+++E LTYR HS SD + YR+R+EI Sbjct: 329 MPAARVDGLDALAVYHTVRKARELILNNHRPVLVEALTYRLSHHSTSDDSTAYRSRDEIE 388 Query: 303 EMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 PIE+ +R + + W E + +E R++++ E + +K P Sbjct: 389 HFAETFSPIERF-ERFMAERGWWTPEQSTEVVERTRREVLS---ELRRQEKLP 437 >gi|218754229|ref|ZP_03533025.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis GM 1503] Length = 294 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 13/222 (5%) Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGH 157 L + D + YRE G L G+ + G GG+ F+TK Sbjct: 17 LRKTDWLFPQYRELGVYLVRGIPPGHVGVAWRGTWHGGLQ---------FTTKCCAPMSV 67 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 I G Q G A A + D + V GDGA ++G V+E+ N AA++ ++ ++N Sbjct: 68 PI-GTQTLHAVGAAMAAQRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQN 126 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 NQ+A+ VSR +A + + + + + +PG++VDG D+ A A M +A A RA GP +I Sbjct: 127 NQWAISMPVSRQTAAPSIAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLI 186 Query: 278 EMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 E +TYR H+ + DP YR++EE++ + DPI + R L Sbjct: 187 EAVTYRLGPHTTADDPTRYRSQEEVDRW-ATLDPIPRYRTYL 227 >gi|237838509|ref|XP_002368552.1| 2-oxoisovalerate dehydrogenase, putative [Toxoplasma gondii ME49] gi|211966216|gb|EEB01412.1| 2-oxoisovalerate dehydrogenase, putative [Toxoplasma gondii ME49] gi|221505843|gb|EEE31488.1| 2-oxoisovalerate dehydrogenase, putative [Toxoplasma gondii VEG] Length = 516 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 85/329 (25%), Positives = 153/329 (46%), Gaps = 6/329 (1%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 LEG F + + R+M+ + ++ + G + F G+EA +VG Sbjct: 148 LLEGPSSLPFPLDLGVRMLRVMIQSQVYDSTFYDIQRQGRIS-FYMTSFGEEASLVGSAA 206 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +L + D ++ YRE ++ G+ I+A+L + KG+ +H +T Sbjct: 207 ALHKDDLLLLQYRELSALMWRGLTLDDILAQLFATKNDPGKGRQMPVHYGATNVNMMPIC 266 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + ++ G G+ +A ++ + + VV FG+GAA++G FN AA +++ N Sbjct: 267 SPLAVKIPQGAGVGYAYTLQKKNAVAVVYFGEGAASEGDASVGFNFAATLGSQTLFLCRN 326 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N YA+ T V R V++ I ++VDG D+ AV A + A A + P + Sbjct: 327 NGYAISTPVGEQYKGDGVGARAVAYGIDTVRVDGTDLVAVYAAVKAARELVVAQRKPAFV 386 Query: 278 EMLTYRYRGHSMSDPAN-YRTREEINEMR-SNHDPIEQVRKRLLHN-KWASEGDLKEIEM 334 EM+TYR HS SD + YR+ EE+ + + S PI + L + +W++E + + + Sbjct: 387 EMMTYRIGHHSTSDESGAYRSAEEVEQWQASAAHPIRRFATFLTNQGRWSAEEE-SALVV 445 Query: 335 NVRKIINNSVEFAQSDKEPDPAE-LYSDI 362 RK + + + K P ++SD+ Sbjct: 446 ETRKEVLAKIRVHEKMKHPPVLSGIFSDV 474 >gi|225714562|gb|ACO13127.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial precursor [Lepeophtheirus salmonis] Length = 429 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 82/317 (25%), Positives = 145/317 (45%), Gaps = 4/317 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +K++ + Y+ M L+ ++ + G + F G+EA VG +L D + Sbjct: 82 DKDELIRMYKSMTLLNTMDKILYESQRQGRIS-FYMTNYGEEATHVGSASALDPQDIVYG 140 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YRE G +L G +M + Q KGK +H + F + Q+ Sbjct: 141 QYRETGVLLHRGQTLDGLMNQCYSNQLDFGKGKQMPVHYGNKDLNFVTISSPLATQMPQA 200 Query: 168 TGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A+A K R + + V+C FG+GAA++G + +FN AA + +I+ NN YA+ T Sbjct: 201 VGTAYAFK-RAKNGLVVICYFGEGAASEGDAHAAFNFAATLDCPIIFFCRNNGYAISTPA 259 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + RG ++ I ++VDG D+ AV +A + P++IE +TYR Sbjct: 260 EEQFRSDGVAPRGPAYGISTIRVDGNDLFAVYNATKEARNTAVSENRPVLIEAMTYRIGH 319 Query: 287 HSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HS SD ++ YR+ +E+ PI + L + K+ + R+ + + Sbjct: 320 HSTSDDSSAYRSVDEVRYWDVKDHPITRFSLYLKDKGLWDDDTEKKWGQDARQQVLKAFA 379 Query: 346 FAQSDKEPDPAELYSDI 362 A+ + +P E+++D+ Sbjct: 380 RAEKELKPSIKEMFTDV 396 >gi|260201620|ref|ZP_05769111.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis T46] Length = 285 Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 13/222 (5%) Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGH 157 L + D + YRE G L G+ + G GG+ F+TK Sbjct: 8 LRKTDWLFPQYRELGVYLVRGIPPGHVGVAWRGTWHGGLQ---------FTTKCCAPMSV 58 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 I G Q G A A + D + V GDGA ++G V+E+ N AA++ ++ ++N Sbjct: 59 PI-GTQTLHAVGAAMAAQRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQN 117 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 NQ+A+ VSR +A + + + + + +PG++VDG D+ A A M +A A RA GP +I Sbjct: 118 NQWAISMPVSRQTAAPSIAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLI 177 Query: 278 EMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 E +TYR H+ + DP YR++EE++ + DPI + R L Sbjct: 178 EAVTYRLGPHTTADDPTRYRSQEEVDRW-ATLDPIPRYRTYL 218 >gi|166710347|ref|ZP_02241554.1| putative pyruvate dehydrogenase E1 alpha subunit [Xanthomonas oryzae pv. oryzicola BLS256] Length = 362 Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 86/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N + L+ ++ ML +R F+ K+ L G +G + CIG EA VG+ S+ GD Sbjct: 32 NPQHLLALFKRMLFVRSFDTKSVALQRTGKLGTYA-ACIGHEATHVGIGASMRSGDVFAP 90 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM-FSTKNGFYGGHGIVGAQVSL 166 +YRE+G + GV ++ G + G + + F + Q Sbjct: 91 SYREYGTMFERGVRPRDVLLYWGGDERGSDYPRDADAAIDFPICVP-------ISTQCLH 143 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A + K + ++ V C GDG +++ Y + N A + L +I + NN +A+ Sbjct: 144 AAGSALSFKLQGKPQVAVACCGDGGSSKIDFYAALNSAGAYTLPLILCVINNGWAISVPR 203 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S + +++G++ + +QVDG D+ AV M +A A G +IE LTYR Sbjct: 204 SAQTGAQTLAQKGLAGGLQCLQVDGNDLVAVLEAMRQARVRALAGDGGTVIEFLTYRLSD 263 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLL---------HNKWASEGDLKEIEMNV 336 H+ +D A YR EE+ + + +P+ ++R+ L + W +E + ++ V Sbjct: 264 HTTADDARRYRGEEELKQGWAR-EPLLRLRRYLTAQGLWDGAQEDAWKAECSAR-VDEEV 321 Query: 337 RKIINNSVE-----FAQSDKEPDPAELYS 360 +N V+ F +P PAEL + Sbjct: 322 NAYLNTPVQPVEAMFDHLYGDP-PAELLA 349 >gi|242773036|ref|XP_002478157.1| 2-oxoisovalerate dehydrogenase complex alpha subunit, putative [Talaromyces stipitatus ATCC 10500] gi|218721776|gb|EED21194.1| 2-oxoisovalerate dehydrogenase complex alpha subunit, putative [Talaromyces stipitatus ATCC 10500] Length = 448 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 89/358 (24%), Positives = 164/358 (45%), Gaps = 21/358 (5%) Query: 19 PSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIR-----RFE-EKAGQL 72 PS S +D + + E ++ + E+ ++ Y+ ML + FE ++ G+L Sbjct: 60 PSSSPAMPTYRVMDSDGVIVDKKHEPTDVSTEEIITWYKNMLTVNIMDVIMFEAQRQGRL 119 Query: 73 YGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR 132 F + G+E + VG +L + D + YRE G G + MA+L Sbjct: 120 -------SFYMVSAGEEGIAVGSASALEDHDVVFCQYRESGVFQQRGFTMKQFMAQLFAN 172 Query: 133 QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR-----RSDKICVVC- 186 + +G+ +H + + Q+ G A+A K + + V C Sbjct: 173 RHDSGQGRNMPVHYGLEYPRIFTISSPLATQLPQAAGAAYAMKIQALQNPNNPAGVVACY 232 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPG 246 FG+GAA++G + + N+AA + ++++ NN +A+ T + RG+ + I Sbjct: 233 FGEGAASEGDFHAALNMAATRSCPIVFICRNNGFAISTPTLEQYRGDGIASRGIGYGIDT 292 Query: 247 MQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEM 304 ++VDG DI AV+ +A + G PI+IE ++YR HS SD + YR R E+ + Sbjct: 293 IRVDGNDIFAVREATKEARRMALENGGRPILIEAMSYRVSHHSTSDDSFTYRARVEVEDW 352 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + +PI ++RK L +E ++ ++R I A+ +K+P E+++D+ Sbjct: 353 KRRDNPIIRLRKWLESKGAWNEELEQQARTDLRAAILKEFNAAEREKKPALKEMFNDV 410 >gi|194468418|ref|ZP_03074404.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Lactobacillus reuteri 100-23] gi|194453271|gb|EDX42169.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Lactobacillus reuteri 100-23] Length = 368 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 17/291 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ F+ E + + M+ R E+ G +G F G+EA +G + + D Sbjct: 39 MANFSDELLVDLMKKMVWERALHEQTMSFSKQGRLG-FYAPTWGEEASEMGTAAAFKKQD 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + AYR+ ++ G +++ G G ++F + I+GAQ Sbjct: 98 FLFPAYRDLPQLIQHGATVAQMYLWSKGHIKG---------NLFDARA--LRPQIIIGAQ 146 Query: 164 -VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V + G K D + G+G ++QG YE N A ++ + +++I+NN +A+ Sbjct: 147 MVEMAGGALGIKKNGEKDTVAYAYTGEGGSSQGDTYEGMNFAGVFQVPGVFIIQNNGWAI 206 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +++ V+ IPG+QVDGMD+ A +A + A GP++IE LTY Sbjct: 207 SFPRKLQTEAQTIAQKAVAAGIPGVQVDGMDVLACYEVAKEAREFAAAGNGPVLIETLTY 266 Query: 283 RYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLK 330 R+ HS + DP YRT +E ++ + DP+ ++RK L W+ E + K Sbjct: 267 RFGAHSSAGDDPTRYRTEDE-TKLWFDKDPLIRLRKYLTKKGLWSEEEEQK 316 >gi|75761046|ref|ZP_00741046.1| 2-oxoisovalerate dehydrogenase alpha subunit [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74491457|gb|EAO54673.1| 2-oxoisovalerate dehydrogenase alpha subunit [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 248 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 91/180 (50%), Gaps = 1/180 (0%) Query: 113 GHILACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 G +LA G+ A ++M + G S G+ H KN G V QV GIA Sbjct: 2 GVVLAFGMTAKELMLSAFAKAGDPNSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGIA 61 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A K + D + V FG+G++NQG +E N A + L VI++ ENN+YA+ V + A Sbjct: 62 LAGKMEKKDLVTFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMCENNKYAISIPVEKQLA 121 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 N S R + + +PG +DG D AV + +A R +GP +IE ++YR HS D Sbjct: 122 CKNVSDRAIGYGMPGYTIDGNDPLAVYKAVKEAADRGRRGEGPTLIETVSYRLTAHSSDD 181 >gi|313890342|ref|ZP_07823974.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pseudoporcinus SPIN 20026] gi|313121328|gb|EFR44435.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pseudoporcinus SPIN 20026] Length = 365 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 12/226 (5%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 GQEA G ++L + D YR+ + G+ S+ G ++ ++M Sbjct: 79 GQEASQYGAVLALDKKDVFAPTYRDVFAGVKFGLKLSQAFLWYKGHY--VANQYPKDLNM 136 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 +S N GG I +LG GIA + + ++ + GD A +QG YE+ N A + Sbjct: 137 YSP-NVIVGGTTIQ----ALGNGIA--KRMKGEKQVALSLCGDSATSQGDFYEALNFAGV 189 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 + N+I V++NN Y + S + +++ V+ IP +++DGMD AV T+ KA Sbjct: 190 FKANLIAVVQNNGYGISVPTSHQTKAATLAQKAVAAGIPAIRIDGMDPVAVYYTVKKARE 249 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPI 311 Y GP++IE +TYR+ H+MS DP YR EE+ E R DP+ Sbjct: 250 YA-IENGPVLIENMTYRFGPHTMSDDPKRYRADEEVEEWRQK-DPL 293 >gi|146086043|ref|XP_001465431.1| 2-oxoisovalerate dehydrogenase alpha subunit [Leishmania infantum JPCM5] gi|134069529|emb|CAM67852.1| putative 2-oxoisovalerate dehydrogenase alpha subunit [Leishmania infantum JPCM5] Length = 479 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 77/293 (26%), Positives = 128/293 (43%), Gaps = 24/293 (8%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F G+EA ++G L D++ YRE G + G + +A+ G KG+ Sbjct: 149 FYMTMFGEEAAVIGAAAGLASNDELFAQYREAGILTYRGYTIPEFIAQCMGNCECDLKGR 208 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY------RR-----------SDKIC 183 +H S + + Q+ G G +A + RR +IC Sbjct: 209 QMPIHYGSKRLNAQMVSSPLATQIPHGAGAGYAFRLENQALERRLPTGTLLSTIPEARIC 268 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 FG+GAA++G + N A+ + ++ + NN YA+ T R V + Sbjct: 269 ATFFGEGAASEGDFHAGLNFASTVGSHTLFFVRNNGYAISTPTHSQYMGDGILSRAVGYG 328 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEIN 302 +P +VDG+D AV T+ KA + P+++E LTYR HS SD + YR+R+EI Sbjct: 329 MPAARVDGLDALAVYHTVRKAREMILNNHRPVLVEALTYRLSHHSTSDDSTAYRSRDEIE 388 Query: 303 EMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 PIE+ +R + + W E + +E R++++ E + +K P Sbjct: 389 HFAETFSPIERF-ERFMAERGWWTPEQSTEVVERTRREVLS---ELRRQEKLP 437 >gi|254176370|ref|ZP_04883028.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia mallei ATCC 10399] gi|160697412|gb|EDP87382.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia mallei ATCC 10399] Length = 410 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 6/266 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R ML R F+ + Q+ F C+G+EA+ V ++L GD YR+ G ++ Sbjct: 82 RAMLKTRIFDARM-QITQRQKKISFYMQCLGEEAIAVAHTLALERGDMCFPTYRQQGILM 140 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANK 175 +M +L + KG+ + M+ST++ GF+ G + Q G A A+ Sbjct: 141 VREYPLVDMMCQLMSNERDPLKGRQLPV-MYSTRDAGFFSISGNLATQFIQAVGWAMASA 199 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TN 234 + +I GDGA + + + A ++ VI + NNQ+A+ T + A + Sbjct: 200 IKGDTRIASAWIGDGATAEADFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGAT 259 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 F+ RGV I ++VDG D AV A A R + GP +IE +TYR HS S DP Sbjct: 260 FAGRGVGCGIASLRVDGNDFLAVYAASRWAAERARRNLGPTLIEWVTYRAGPHSTSDDPT 319 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLL 319 YR ++ DP+E++++ ++ Sbjct: 320 KYRPGDDWTNFPLG-DPLERLKRHMI 344 >gi|238562318|ref|ZP_04610013.1| 2-oxoisovalerate dehydrogenase subunit alpha (branched-chain alpha-keto acid dehydrogenase e1 component alpha chain) (bckdhe1-alpha) [Burkholderia mallei GB8 horse 4] gi|254205416|ref|ZP_04911769.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia mallei JHU] gi|147755002|gb|EDK62066.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia mallei JHU] gi|238522838|gb|EEP86280.1| 2-oxoisovalerate dehydrogenase subunit alpha (branched-chain alpha-keto acid dehydrogenase e1 component alpha chain) (bckdhe1-alpha) [Burkholderia mallei GB8 horse 4] Length = 400 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 6/266 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R ML R F+ + Q+ F C+G+EA+ V ++L GD YR+ G ++ Sbjct: 72 RAMLKTRIFDARM-QIAQRQKKISFYMQCLGEEAIAVAHTLALERGDMCFPTYRQQGILM 130 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANK 175 +M +L + KG+ + M+ST++ GF+ G + Q G A A+ Sbjct: 131 VREYPLVDMMCQLMSNERDPLKGRQLPV-MYSTRDAGFFSISGNLATQFIQAVGWAMASA 189 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TN 234 + +I GDGA + + + A ++ VI + NNQ+A+ T + A + Sbjct: 190 IKGDTRIASAWIGDGATAEADFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGAT 249 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 F+ RGV I ++VDG D AV A A R + GP +IE +TYR HS S DP Sbjct: 250 FAGRGVGCGIASLRVDGNDFLAVYAASRWAAERARRNLGPTLIEWVTYRAGPHSTSDDPT 309 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLL 319 YR ++ DP+E++++ ++ Sbjct: 310 KYRPGDDWTNFPLG-DPLERLKRHMI 334 >gi|83717236|ref|YP_440491.1| 2-oxoisovalerate dehydrogenase, E1 component subunit alpha [Burkholderia thailandensis E264] gi|167579157|ref|ZP_02372031.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia thailandensis TXDOH] gi|167617273|ref|ZP_02385904.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia thailandensis Bt4] gi|83651061|gb|ABC35125.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia thailandensis E264] Length = 410 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 125/266 (46%), Gaps = 6/266 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R ML R F+ + Q+ F C+G+EA+ V ++L GD YR+ G ++ Sbjct: 82 RAMLKTRIFDARM-QIAQRQKKISFYMQCLGEEAIAVAHTLALERGDMCFPTYRQQGILM 140 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANK 175 +M +L + KG+ + M+ST+ GF+ G + Q G A A+ Sbjct: 141 VRDYPLVDMMCQLMSNERDPLKGRQLPV-MYSTREAGFFSISGNLATQFIQAVGWAMASA 199 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TN 234 + +I GDGA + + + A ++ VI + NNQ+A+ T + A + Sbjct: 200 IKGDTRIASAWIGDGATAEADFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGAT 259 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 F+ RGV I ++VDG D AV A A R + GP +IE +TYR HS S DP Sbjct: 260 FAGRGVGCGIASLRVDGNDFLAVYAASRWAAERARRNLGPTLIEWVTYRAGPHSTSDDPT 319 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLL 319 YR ++ DP+E++++ ++ Sbjct: 320 KYRPGDDWTHFPLG-DPLERLKRHMI 344 >gi|53716061|ref|YP_106531.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia mallei ATCC 23344] gi|124381521|ref|YP_001025124.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia mallei NCTC 10229] gi|126447708|ref|YP_001079473.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia mallei NCTC 10247] gi|167002194|ref|ZP_02267984.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia mallei PRL-20] gi|254203542|ref|ZP_04909903.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia mallei FMH] gi|52422031|gb|AAU45601.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia mallei ATCC 23344] gi|126240562|gb|ABO03674.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia mallei NCTC 10247] gi|147745781|gb|EDK52860.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia mallei FMH] gi|243062095|gb|EES44281.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia mallei PRL-20] gi|261826360|gb|ABM99989.2| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia mallei NCTC 10229] Length = 410 Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 6/266 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R ML R F+ + Q+ F C+G+EA+ V ++L GD YR+ G ++ Sbjct: 82 RAMLKTRIFDARM-QIAQRQKKISFYMQCLGEEAIAVAHTLALERGDMCFPTYRQQGILM 140 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANK 175 +M +L + KG+ + M+ST++ GF+ G + Q G A A+ Sbjct: 141 VREYPLVDMMCQLMSNERDPLKGRQLPV-MYSTRDAGFFSISGNLATQFIQAVGWAMASA 199 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TN 234 + +I GDGA + + + A ++ VI + NNQ+A+ T + A + Sbjct: 200 IKGDTRIASAWIGDGATAEADFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGAT 259 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 F+ RGV I ++VDG D AV A A R + GP +IE +TYR HS S DP Sbjct: 260 FAGRGVGCGIASLRVDGNDFLAVYAASRWAAERARRNLGPTLIEWVTYRAGPHSTSDDPT 319 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLL 319 YR ++ DP+E++++ ++ Sbjct: 320 KYRPGDDWTNFPLG-DPLERLKRHMI 344 >gi|149186676|ref|ZP_01864987.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Erythrobacter sp. SD-21] gi|148829584|gb|EDL48024.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Erythrobacter sp. SD-21] Length = 438 Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 78/273 (28%), Positives = 132/273 (48%), Gaps = 9/273 (3%) Query: 59 MLLIRRFEEKA--GQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 M + R F+E+ GQ G F C G+EA V M+L D + +YR+ G ++ Sbjct: 95 MAMTRAFDERMFRGQRQGKT---SFYMKCTGEEATSVSASMALAADDMVFPSYRQQGILI 151 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G +++ ++ +G KG+ + S ++ F+ G + Q G A A+ Sbjct: 152 QRGYPMIEMINQIYSNRGDKLKGRQLPIMYSSKEHSFFTISGNLATQTPQAVGWAMASAI 211 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNF 235 + +I G+G+ +G + + A ++N VI + NNQ+A+ + A A+ F Sbjct: 212 KGDSRIAATWVGEGSTAEGDFHSACLFATVYNAPVILNVVNNQWAISSFSGFAGAERATF 271 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + RGV + I ++VDG D A A RA+ GP +IE +YR GHS S DP+ Sbjct: 272 AARGVGYGIASLRVDGNDPLACYEAEQWAANRARANAGPTLIEFFSYRAEGHSTSDDPSG 331 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLH-NKWASE 326 YR+ +E +E DP+ +++ L+ +W E Sbjct: 332 YRSAQERDEWPLG-DPVMRLKNHLIEIGEWDEE 363 >gi|332523786|ref|ZP_08400038.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus porcinus str. Jelinkova 176] gi|332315050|gb|EGJ28035.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus porcinus str. Jelinkova 176] Length = 365 Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 12/226 (5%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 GQEA G ++L + D YR+ + G+ S+ G ++ ++M Sbjct: 79 GQEASQYGAVLALDKKDVFAPTYRDVFAGVKFGLKLSQAFLWYKGHY--VANQYPKDLNM 136 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 +S N GG I +LG GIA + + +I + GD A +QG YE+ N A + Sbjct: 137 YSP-NVIVGGTTIQ----ALGNGIA--KRMKGEKQIALSLCGDSATSQGDFYEALNFAGV 189 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 + N++ V++NN Y + S + +++ V+ IP +++DGMD AV T+ KA Sbjct: 190 FKANLVAVVQNNGYGISVPTSHQTKAATLAQKAVAAGIPAVRIDGMDPVAVYYTVKKARE 249 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPI 311 Y GP++IE +TYR+ H+MS DP YR EE+ E R DP+ Sbjct: 250 YA-IENGPVLIENMTYRFGPHTMSDDPKRYRADEEVEEWRQK-DPL 293 >gi|322491636|emb|CBZ26909.1| 2-oxoisovalerate dehydrogenase alpha subunit,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 479 Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 76/291 (26%), Positives = 124/291 (42%), Gaps = 20/291 (6%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F G+EA ++G L D++ YRE G + G + +A+ G KG+ Sbjct: 149 FYMTMFGEEAAVIGAAAGLASNDELFAQYREAGILTYRGYTIPEFIAQCMGNCECDLKGR 208 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY------RR-----------SDKIC 183 +H S + + Q+ G G +A + RR +IC Sbjct: 209 QMPIHYGSNRLHAQMVSSPLATQIPHGAGAGYAFRLENQALERRLPAGTLLSTIPEARIC 268 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 FG+GAA++G + N A+ + ++ + NN YA+ T R + Sbjct: 269 ATFFGEGAASEGDFHAGLNFASTVGSHTLFFVRNNGYAISTPTHSQYMGDGILSRAAGYG 328 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEIN 302 +P +VDG+D AV T+ KA + P+++E LTYR HS SD + YR+R+EI Sbjct: 329 MPAARVDGLDALAVYHTVRKAREMILNNHRPVLVEALTYRLSHHSTSDDSTAYRSRDEIE 388 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 PIE+ + + W + KE+ RK + + E + +K P Sbjct: 389 HFAETFSPIERFERFMAERGWWTPVQSKEVVEKTRKEVLS--ELRRQEKLP 437 >gi|217424130|ref|ZP_03455629.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei 576] gi|254192509|ref|ZP_04898948.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei S13] gi|169649267|gb|EDS81960.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei S13] gi|217392595|gb|EEC32618.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei 576] Length = 400 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 6/266 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R ML R F+ + Q+ F C+G+EA+ V ++L GD YR+ G ++ Sbjct: 72 RAMLKTRIFDARM-QIAQRQKKISFYMQCLGEEAIAVAHTLALERGDMCFPTYRQQGILM 130 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANK 175 +M +L + KG+ + M+ST++ GF+ G + Q G A A+ Sbjct: 131 VREYPLVDMMCQLMSNERDPLKGRQLPV-MYSTRDAGFFSISGNLATQFIQAVGWAMASA 189 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TN 234 + +I GDGA + + + A ++ VI + NNQ+A+ T + A + Sbjct: 190 IKGDTRIASAWIGDGATAEADFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGAT 249 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 F+ RGV I ++VDG D AV A A R + GP +IE +TYR HS S DP Sbjct: 250 FAGRGVGCGIASLRVDGNDFLAVYAASRWAAERARRNLGPTLIEWVTYRAGPHSTSDDPT 309 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLL 319 YR ++ DP+E++++ ++ Sbjct: 310 KYRPGDDWTNFPLG-DPLERLKRHMI 334 >gi|111222645|ref|YP_713439.1| putative branched-chain alpha keto acid dehydrogenase E1 subunit alpha [Frankia alni ACN14a] gi|111150177|emb|CAJ61872.1| putative branched-chain alpha keto acid dehydrogenase E1 alpha subunit [Frankia alni ACN14a] Length = 396 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 73/269 (27%), Positives = 129/269 (47%), Gaps = 11/269 (4%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F+ E + YR ++L RRF ++A L G + + GQEA V M L + D + Sbjct: 46 FDAEVQRELYRRIVLGRRFNQQATTLTRQGRLAVYP-ASTGQEACQVTAAMVLRDVDWLF 104 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH---MFSTKNGFYGGHGIVGAQ 163 +YR+ ++A GV + + LT +G G H ST H + Sbjct: 105 PSYRDTLAVVARGV---RPLDALTLMRGHAHSGYDPYSHRIAPLSTPLATQAPHAV--GL 159 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 A + + + + GDG ++G +E+ N A + V+++++NN YA+ Sbjct: 160 AHAARLRAATDPAAAENLVALALVGDGGTSEGDFHEALNFAGVLGAPVVFLVQNNGYAIS 219 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 ++ SA + + + V + I G VDG D A+ + + AV + R+ +GP+++E +TYR Sbjct: 220 VPLASQSAAPSLAHKAVGYGIAGRLVDGNDALAMHSVLSAAVDHARSGRGPVLVEAVTYR 279 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPI 311 H+ +D A YR+ E++ R+ DP+ Sbjct: 280 LDAHTNADDATRYRSAAEVDAWRAR-DPL 307 >gi|21241219|ref|NP_640801.1| pyruvate dehydrogenase E1 alpha subunit [Xanthomonas axonopodis pv. citri str. 306] gi|21106531|gb|AAM35337.1| pyruvate dehydrogenase E1 alpha subunit [Xanthomonas axonopodis pv. citri str. 306] Length = 362 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 11/273 (4%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N + L+ ++ ML +R F+ K+ L G +G + CIG EA VG+ S+ GD Sbjct: 32 NPQHLLALFKRMLFVRTFDTKSVALQRTGKLGTYA-ACIGHEATHVGIGASMRSGDVFAP 90 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM-FSTKNGFYGGHGIVGAQVSL 166 +YRE+G + GV ++ G + G + + F + Q Sbjct: 91 SYREYGTMFERGVRPRDVLLYWGGDERGSDYPRDADAAIDFPICVP-------ISTQCLH 143 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A + K + + V C GDG +++ Y + N A + L +I + NN +A+ Sbjct: 144 AAGSALSFKLQGKQHVAVACCGDGGSSKTDFYAALNSAGAYKLPLILCVINNGWAISVPR 203 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S + +++G++ + +QVDG D+ AV M +A A +G +IE LTYR Sbjct: 204 SAQTGAQTLAQKGLAGGLHCLQVDGNDLVAVLEAMRQARVRALAGEGGTVIEFLTYRLSD 263 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRL 318 H+ +D A YR EE+ + + +P+ ++R+ L Sbjct: 264 HTTADDARRYRGEEEVKQGWAR-EPLLRLRRYL 295 >gi|53723291|ref|YP_112276.1| 2-oxoisovalerate dehydrogenase alpha subunit [Burkholderia pseudomallei K96243] gi|76819484|ref|YP_336568.1| 2-oxoisovalerate dehydrogenase subunit alpha [Burkholderia pseudomallei 1710b] gi|126444383|ref|YP_001064184.1| 2-oxoisovalerate dehydrogenase E1 component subunit alpha [Burkholderia pseudomallei 668] gi|126456753|ref|YP_001077096.1| 2-oxoisovalerate dehydrogenase E1 component subunit alpha [Burkholderia pseudomallei 1106a] gi|134281769|ref|ZP_01768476.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei 305] gi|167725358|ref|ZP_02408594.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia pseudomallei DM98] gi|167744281|ref|ZP_02417055.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia pseudomallei 14] gi|167821486|ref|ZP_02453166.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia pseudomallei 91] gi|167851295|ref|ZP_02476803.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia pseudomallei B7210] gi|167899930|ref|ZP_02487331.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia pseudomallei 7894] gi|167908246|ref|ZP_02495451.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia pseudomallei NCTC 13177] gi|167916585|ref|ZP_02503676.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia pseudomallei 112] gi|167924441|ref|ZP_02511532.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia pseudomallei BCC215] gi|237509671|ref|ZP_04522386.1| 2-oxoisovalerate dehydrogenase subunit alpha (branched-chain alpha-keto acid dehydrogenase e1 component alpha chain) (bckdhe1-alpha) [Burkholderia pseudomallei MSHR346] gi|242312873|ref|ZP_04811890.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei 1106b] gi|254182491|ref|ZP_04889085.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei 1655] gi|254187046|ref|ZP_04893561.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei Pasteur 52237] gi|254265033|ref|ZP_04955898.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei 1710a] gi|254296568|ref|ZP_04964024.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei 406e] gi|52213705|emb|CAH39759.1| 2-oxoisovalerate dehydrogenase alpha subunit [Burkholderia pseudomallei K96243] gi|76583957|gb|ABA53431.1| 2-oxoisovalerate dehydrogenase alpha subunit [Burkholderia pseudomallei 1710b] gi|126223874|gb|ABN87379.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei 668] gi|126230521|gb|ABN93934.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei 1106a] gi|134246831|gb|EBA46918.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei 305] gi|157806363|gb|EDO83533.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei 406e] gi|157934729|gb|EDO90399.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei Pasteur 52237] gi|184213026|gb|EDU10069.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei 1655] gi|235001876|gb|EEP51300.1| 2-oxoisovalerate dehydrogenase subunit alpha (branched-chain alpha-keto acid dehydrogenase e1 component alpha chain) (bckdhe1-alpha) [Burkholderia pseudomallei MSHR346] gi|242136112|gb|EES22515.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei 1106b] gi|254216035|gb|EET05420.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei 1710a] Length = 410 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 6/266 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R ML R F+ + Q+ F C+G+EA+ V ++L GD YR+ G ++ Sbjct: 82 RAMLKTRIFDARM-QIAQRQKKISFYMQCLGEEAIAVAHTLALERGDMCFPTYRQQGILM 140 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANK 175 +M +L + KG+ + M+ST++ GF+ G + Q G A A+ Sbjct: 141 VREYPLVDMMCQLMSNERDPLKGRQLPV-MYSTRDAGFFSISGNLATQFIQAVGWAMASA 199 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TN 234 + +I GDGA + + + A ++ VI + NNQ+A+ T + A + Sbjct: 200 IKGDTRIASAWIGDGATAEADFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGAT 259 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 F+ RGV I ++VDG D AV A A R + GP +IE +TYR HS S DP Sbjct: 260 FAGRGVGCGIASLRVDGNDFLAVYAASRWAAERARRNLGPTLIEWVTYRAGPHSTSDDPT 319 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLL 319 YR ++ DP+E++++ ++ Sbjct: 320 KYRPGDDWTNFPLG-DPLERLKRHMI 344 >gi|111018575|ref|YP_701547.1| pyruvate dehydrogenase E1 component alpha subunit [Rhodococcus jostii RHA1] gi|110818105|gb|ABG93389.1| pyruvate dehydrogenase E1 component alpha subunit [Rhodococcus jostii RHA1] Length = 365 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 82/276 (29%), Positives = 128/276 (46%), Gaps = 13/276 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + +Q Y +++ RR + +A L G +G + + +GQEA VG +L D Sbjct: 28 VRDIGPDQLRGLYEDLVVARRMDVEAVALQRQGELGLWAPM-LGQEAAQVGSARALRSDD 86 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +YREH GVD +M + +G S S+ N +VG+Q Sbjct: 87 YAFISYREHAVAYCRGVDPG-VMTRMW-------RGCAHSAWDPSSVN-VTNPAIVVGSQ 137 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 TG A ++ + FGDGA +QG + E+ + +N V++ +NNQ+A+ Sbjct: 138 GLHATGYAMGAHLDGAEIATIAYFGDGATSQGDLAEALGFSMSFNAPVVFFCQNNQFAIS 197 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 V S ++R + +P ++VDG D+ AV A +A R GP IE +TYR Sbjct: 198 EPVHLQSP-VPIAQRAAGYGMPALRVDGNDVLAVLAVTRQATQRAREGSGPTFIEAVTYR 256 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 H+ S DP YR E E+ DPI ++R+ L Sbjct: 257 MGPHTTSDDPTRYRAAAE-TEVWKARDPINRMRRLL 291 >gi|121597380|ref|YP_990635.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia mallei SAVP1] gi|121225178|gb|ABM48709.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia mallei SAVP1] Length = 410 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 6/266 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R ML R F+ + Q+ F C+G+EA+ V ++L GD YR+ G ++ Sbjct: 82 RAMLKTRIFDARM-QIAQRQKKISFYMQCLGEEAIAVAHTLALERGDMCFPTYRQQGILM 140 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANK 175 +M +L + KG+ + M+ST++ GF+ G + Q G A A+ Sbjct: 141 VREYPLVDMMCQLMSNERDPLKGRQLPV-MYSTRDAGFFSISGNLATQFIQAVGWAMASA 199 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TN 234 + +I GDGA + + + A ++ VI + NNQ+A+ T + A + Sbjct: 200 IKGDTRIVSAWIGDGATAEADFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGAT 259 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 F+ RGV I ++VDG D AV A A R + GP +IE +TYR HS S DP Sbjct: 260 FAGRGVGCGIASLRVDGNDFLAVYAASRWAAERARRNLGPTLIEWVTYRAGPHSTSDDPT 319 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLL 319 YR ++ DP+E++++ ++ Sbjct: 320 KYRPGDDWTNFPLG-DPLERLKRHMI 344 >gi|225681277|gb|EEH19561.1| 2-oxoisovalerate dehydrogenase subunit alpha [Paracoccidioides brasiliensis Pb03] Length = 477 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 78/294 (26%), Positives = 135/294 (45%), Gaps = 20/294 (6%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F + G+E + VG +L+ D + YRE G G M++L + +G+ Sbjct: 156 FYMVSAGEEGIAVGSASALSPDDVVFVQYRETGVFQQRGFTLKDFMSQLFANRNDPGRGR 215 Query: 141 ---GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGA 191 + H S+ + Q+ G A+A K + +I FG+GA Sbjct: 216 ICQSITAHTVSSP---------LATQIPQAAGAAYALKIQALQNPNIPKRIVACYFGEGA 266 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 A++G + + NIAA + V+++ NN YA+ T + RGV + I ++VDG Sbjct: 267 ASEGDFHAALNIAATRSCPVVFICRNNGYAISTPTLEQYRGDGIASRGVGYGIDTIRVDG 326 Query: 252 MDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHD 309 D AV +A + G PI+IE ++YR HS SD + YR R E+ + + + Sbjct: 327 NDFFAVHEATKEARRMALENGGRPILIEAMSYRVSHHSTSDDSFAYRARVEVEDWKRRDN 386 Query: 310 PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 PI ++RK + + +E ++ VRK + A+ +K+P E+++D+ Sbjct: 387 PITRLRKWMENQGIWNEDLERDTRDEVRKAVLREFSAAEKEKKPPLREMFNDVF 440 >gi|126740932|ref|ZP_01756616.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Roseobacter sp. SK209-2-6] gi|126718032|gb|EBA14750.1| 2-oxoisovalerate dehydrogenase (alpha subunit) [Roseobacter sp. SK209-2-6] Length = 394 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 80/266 (30%), Positives = 124/266 (46%), Gaps = 6/266 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ +R F+ + G F +G+EAV +L +GD YR+ G ++ Sbjct: 83 RHMVTLRTFDARMQTAQRQGKTS-FYMQHLGEEAVSCAFARALEDGDMNFPTYRQAGLLV 141 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 A G +M ++ G+ + S ++GF+ G +G Q G A A+ Sbjct: 142 ASGYPMLTMMNQIYSNAHDPLHGRQLPIMYSSKEHGFFSISGNLGTQFVQSVGWAMASAI 201 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT--SVSRASAQTN 234 KI GDG+ + + + A+ + V+ I NNQ+A+ T ++R T Sbjct: 202 SGDTKIATGWIGDGSTAESDFHAAMVFASTYKAPVVLNIVNNQWAISTFQGIARGGVGT- 260 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 F+ RG F I ++VDG D AV A A R GP +IE +TYR GHS S DP+ Sbjct: 261 FAARGHGFGIASLRVDGNDYLAVHAVAKWAAERARRGFGPTLIEHVTYRAGGHSTSDDPS 320 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLL 319 YR+R E DPIE++++ L+ Sbjct: 321 AYRSRREAAAWPLG-DPIERLKQHLI 345 >gi|158314329|ref|YP_001506837.1| pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EAN1pec] gi|158109734|gb|ABW11931.1| Pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EAN1pec] Length = 358 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 85/279 (30%), Positives = 135/279 (48%), Gaps = 20/279 (7%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + Q S YR M+ RR +E+A L G + + L GQEA VG + D + Sbjct: 38 DSRQTESFYREMVRARRLDEEATALQRQGELVLWIPLR-GQEAAQVGSAAAAEPADFLFP 96 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ---- 163 +YREH + G+ + + L G G G ++ N ++ +Q Sbjct: 97 SYREHAVVWHRGIPPVEALRLLRGVTHG-----GWDPEAYNVANYVL----VLASQTLHA 147 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V G G+ + ++ +V GDGA +QG E+F AA + V++ +NNQ+A+ Sbjct: 148 VGYGLGVRLDGA---AGQVVMVYLGDGAMSQGDANEAFVWAASFGAPVVFFCQNNQWAIS 204 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T +R S ++R F PG++VDG D+ AV A A+ + R+ +GP++IE TYR Sbjct: 205 TPSARQSP-VPLARRAAGFGFPGVRVDGNDVLAVHAVTTWALEHARSGQGPVLIEANTYR 263 Query: 284 YRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHN 321 H+ SD A+ Y+ E+ R+ DPI++V L H Sbjct: 264 MAPHTTSDDASRYQEAAEVAAWRAR-DPIDRVALLLGHT 301 >gi|254712340|ref|ZP_05174151.1| 2-oxoisovalerate dehydrogenase alpha subunit [Brucella ceti M644/93/1] gi|254715412|ref|ZP_05177223.1| 2-oxoisovalerate dehydrogenase alpha subunit [Brucella ceti M13/05/1] gi|261217143|ref|ZP_05931424.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella ceti M13/05/1] gi|261320014|ref|ZP_05959211.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella ceti M644/93/1] gi|260922232|gb|EEX88800.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella ceti M13/05/1] gi|261292704|gb|EEX96200.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella ceti M644/93/1] Length = 408 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 80/295 (27%), Positives = 135/295 (45%), Gaps = 4/295 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E+ R M+++R ++ + G F +G+EAV + +L +GD Sbjct: 72 LTDEELKDGLRHMMMLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNF 130 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ G ++A +M ++ + KG+ + S ++GF+ G + Q + Sbjct: 131 PTYRQAGLLIADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQ 190 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A A+ KI GDG+ + + + A+ + V+ I N + + Sbjct: 191 AVGWAMASAISHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNWAISTFQGI 250 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +R + T F+ RG F IP ++VDG D AV A AV R + GP I+E +TYR G Sbjct: 251 ARGGSGT-FAARGHGFGIPSLRVDGNDYLAVHAVAKWAVERARRNLGPTIVEYVTYRAGG 309 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 HS S DP+ YR + E N+ +PI +++ L+ SE K+ + V I+ Sbjct: 310 HSTSDDPSAYRPKAE-NDAWPLGNPILRLKNHLIKRGVWSEERHKQADAEVMDIV 363 >gi|90577949|ref|ZP_01233760.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio angustum S14] gi|90441035|gb|EAS66215.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio angustum S14] Length = 369 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 81/293 (27%), Positives = 144/293 (49%), Gaps = 10/293 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR M+L+R +++KA L G +G + H IG EA+ + + ++ D ++ YR+ Sbjct: 35 YRDMVLVRHYDKKAIALQRTGKLGTYPSH--IGAEAIGIAIGSAMQSTDVLVPYYRDMPA 92 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + A G+ + + G + G S+ N + Q + GIA A Sbjct: 93 LWARGISMLQNLQYWGGDELG---SNFPSISPDIPHNDDMPFCVPISTQCTHAVGIAAAM 149 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + + V GDGA ++G ES N A +WN+ +++VI NNQ+A+ + + Sbjct: 150 KIKGLHRATVATCGDGATSKGDFLESLNCAGVWNIPLVFVINNNQWAISVPLHLQCHAEH 209 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + I G+ VDG DI A+ + K++ R KG +IE ++YR H+ +D A+ Sbjct: 210 LVDKAKGAGIKGIMVDGNDIVAMYDALLKSLDNARKGKGATLIEAVSYRLCDHTTADDAS 269 Query: 295 -YRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNVRKIINNSVE 345 YR EE+ + DPI +++ L++ N W+ + + +++ + IN +VE Sbjct: 270 RYRKDEEVKQAWQ-FDPISRLKTYLINQNLWSEAEESRWLDI-CHQRINQAVE 320 >gi|156976780|ref|YP_001447686.1| pyruvate dehydrogenase E1 component, alpha subunit [Vibrio harveyi ATCC BAA-1116] gi|156528374|gb|ABU73459.1| hypothetical protein VIBHAR_05555 [Vibrio harveyi ATCC BAA-1116] Length = 364 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 81/297 (27%), Positives = 146/297 (49%), Gaps = 19/297 (6%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y+ M+L R ++ KA L G +G + HL G EA+ + + +L D + YR+ Sbjct: 35 YQDMVLTRTYDNKAVALQRTGKLGTYPSHL--GSEAIGIAVGRALKASDVFVPYYRDMPA 92 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + G+ K + G + G GS F +++ + + Q + G+A A Sbjct: 93 MWCRGIGMEKNLQYWGGDERGSDFAPEGSP--FPSRDLPFCVP--IATQCTHAVGVASAL 148 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + + + +V GDGA ++G ES N A WN+ +++++ NNQ+A+ + A Sbjct: 149 KIQGNHEAALVMCGDGATSKGDFLESVNCAGAWNIPLVFIVNNNQWAISVPRTLQCAAEF 208 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S++ IPG+ VDG DI AV A+ R KG +IE ++YR H+ +D A Sbjct: 209 LSEKAKGAGIPGITVDGNDIVAVFDATMTALDRARKGKGATLIEAVSYRLSDHTTADDAT 268 Query: 295 -YRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDL-------KEIEMNVRKIIN 341 YR +E+ + ++P+ ++ K L N+ W++E + +++E+ V + +N Sbjct: 269 RYRNEDEV-QTAWQYEPVRRL-KAFLTNQGVWSNEKEQEWQAHCKEQVELAVERYLN 323 >gi|291241619|ref|XP_002740708.1| PREDICTED: receptor-type protein tyrosine phosphatase O-like [Saccoglossus kowalevskii] Length = 593 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 2/85 (2%) Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV LG GIAFA KY SD +CV FGDGAANQGQ++E+FN+A LW+L I+V ENN Y M Sbjct: 5 QVPLGAGIAFALKYNNSDNVCVSLFGDGAANQGQLFETFNMAKLWDLPAIFVCENNGYGM 64 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGM 247 GTSV RA+A T++ RG IPG+ Sbjct: 65 GTSVERAAASTDYFTRGDY--IPGI 87 >gi|171912933|ref|ZP_02928403.1| Pyruvate dehydrogenase (acetyl-transferring) [Verrucomicrobium spinosum DSM 4136] Length = 318 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 85/305 (27%), Positives = 138/305 (45%), Gaps = 15/305 (4%) Query: 59 MLLIRRFEEKAGQLYGMG--MVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY-REHGHI 115 M R EEK LY G +VGG +L GQEA V + + L++G + R+ Sbjct: 1 MTAARVLEEKLASLYRAGGRIVGGV-YLGKGQEAFSVALGLQLSKGRDIFAGLIRDQAGK 59 Query: 116 LACG---VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 LA G +DA++ G G +G+ G++H K G +G+ VS+ G+ Sbjct: 60 LAFGEPMLDATRTY---LGSALGPMRGRDGNIHRGRPKEGLPAMISHLGSMVSVVAGMLM 116 Query: 173 ANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 + + R D + GDG + G +E N+AA+ L ++ + NNQYA T +R Sbjct: 117 SRRLQGRLGDAVGGTAIGDGGTSTGAFHEGLNLAAVEKLPLVVAVANNQYAYSTPNNRQF 176 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A N R + + G +VDG D+ A A+ RA GP ++ R GH Sbjct: 177 ACANLVDRAKGYGVEGYEVDGKDLLACLQVFQHAITRARAGHGPQMVVGSLLRLGGHGEH 236 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 D A+Y + + D ++ + L WA+ +L + + +K ++ + AQ+ Sbjct: 237 DDASY-IPDTVKHSEHGRDCLQLAEECALERGWATMTELAALRESSQKEVDRA--LAQTS 293 Query: 351 KEPDP 355 +EP P Sbjct: 294 REPSP 298 >gi|300909946|ref|ZP_07127406.1| pyruvate dehydrogenase complex E1 component alpha subunit [Lactobacillus reuteri SD2112] gi|300892594|gb|EFK85954.1| pyruvate dehydrogenase complex E1 component alpha subunit [Lactobacillus reuteri SD2112] Length = 368 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 17/291 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ F+ E + + M+ R E+ G +G F G+EA +G + + D Sbjct: 39 MANFSDELLVDLMKKMVWARALHEQTMSFSKQGRLG-FYAPTWGEEASEMGTAAAFKKQD 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + AYR+ ++ G +++ G G ++F + I+GAQ Sbjct: 98 FLFPAYRDLPQLIQHGATVAQMYLWSKGHIKG---------NLFDARA--LRPQIIIGAQ 146 Query: 164 -VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V + G K D + G+G ++QG YE N A + + +++I+NN +A+ Sbjct: 147 MVEMAGGALGIKKNGEKDTVAYAYTGEGGSSQGDTYEGMNFAGAFQVPGVFIIQNNGWAI 206 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +++ V+ IPG+QVDGMD+ A +A + A GP++IE LTY Sbjct: 207 SFPRKLQTETQTIAQKAVAAGIPGVQVDGMDVLACYEVAKEAREFAAAGNGPVLIETLTY 266 Query: 283 RYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLK 330 R+ HS + DP YRT +E + DP+ ++RK L W+ E + K Sbjct: 267 RFGAHSSAGDDPTRYRTEDETKPW-FDKDPLIRLRKYLTKKGLWSEEEEQK 316 >gi|227544834|ref|ZP_03974883.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus reuteri CF48-3A] gi|227185181|gb|EEI65252.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus reuteri CF48-3A] Length = 371 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 17/291 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ F+ E + + M+ R E+ G +G F G+EA +G + + D Sbjct: 42 MANFSDELLVDLMKKMVWARALHEQTMSFSKQGRLG-FYAPTWGEEASEMGTAAAFKKQD 100 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + AYR+ ++ G +++ G G ++F + I+GAQ Sbjct: 101 FLFPAYRDLPQLIQHGATVAQMYLWSKGHIKG---------NLFDARA--LRPQIIIGAQ 149 Query: 164 -VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V + G K D + G+G ++QG YE N A + + +++I+NN +A+ Sbjct: 150 MVEMAGGALGIKKNGEKDTVAYAYTGEGGSSQGDTYEGMNFAGAFQVPGVFIIQNNGWAI 209 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +++ V+ IPG+QVDGMD+ A +A + A GP++IE LTY Sbjct: 210 SFPRKLQTETQTIAQKAVAAGIPGVQVDGMDVLACYEVAKEAREFAAAGNGPVLIETLTY 269 Query: 283 RYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLK 330 R+ HS + DP YRT +E + DP+ ++RK L W+ E + K Sbjct: 270 RFGAHSSAGDDPTRYRTEDETKPW-FDKDPLIRLRKYLTKKGLWSEEEEQK 319 >gi|84997269|ref|XP_953356.1| branched-chain alpha-keto acid dehydrogenase E1, subunit [Theileria annulata strain Ankara] gi|65304352|emb|CAI76731.1| branched-chain alpha-keto acid dehydrogenase E1, subunit, putative [Theileria annulata] Length = 454 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 117/239 (48%), Gaps = 20/239 (8%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAEL--------TGRQGGISK 138 G+EA +G ++L D + YRE G I G ++A+L GRQ IS Sbjct: 140 GEEATQLGAGLALKPQDHLFCQYRELGVIYLKGCTEDDVLAQLFSTYKDEGKGRQMPISY 199 Query: 139 GKGG-SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 K ++H +T + +Q+ +G +A K + +D + +V FG+GAA++G Sbjct: 200 SKREVNLHTITTP---------LSSQIPQASGSGYALKMQGADAVAMVFFGEGAASEGDC 250 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 + + N AA+ I+ NN Y++ T V + RGV+ IP ++VDG D+ A Sbjct: 251 HAAMNFAAVRQSQTIFACRNNSYSISTPVRDQYVGDGIAIRGVALGIPSIRVDGNDLFAS 310 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNH-DPIEQV 314 YC H PI+IE +TYR HS SD ++ YR + E ++ +PI+++ Sbjct: 311 YMASKYCREYCVKHSTPIVIEYMTYRVGHHSTSDESSQYRGKGEFEAWATDGVNPIKRL 369 >gi|325918814|ref|ZP_08180897.1| pyruvate dehydrogenase E1 component, alpha subunit [Xanthomonas vesicatoria ATCC 35937] gi|325534960|gb|EGD06873.1| pyruvate dehydrogenase E1 component, alpha subunit [Xanthomonas vesicatoria ATCC 35937] Length = 362 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 78/308 (25%), Positives = 140/308 (45%), Gaps = 19/308 (6%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N + L+ ++ ML +R F+ K+ L G +G + C+G EA VG+ S+ GD Sbjct: 32 NPQTLLALFKRMLFVRTFDSKSVALQRTGKLGTYAA-CLGHEATHVGIGASMRSGDVFAP 90 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YRE+G + GV ++ G + G + + + + Q Sbjct: 91 SYREYGTMFERGVRPRDVLLYWGGDERGSDYPRDADAAID------FPICVPISTQCLHA 144 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A + K + ++ V C GDG +++ Y + N A + L +I + NN +A+ S Sbjct: 145 AGSALSFKLQNKPQVAVACCGDGGSSKTDFYAALNSAGAYKLPLILCVINNGWAISVPRS 204 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + +++G++ + +QVDG D+ AV M +A A G +IE +TYR H Sbjct: 205 AQTGAQTLAQKGLAGGLHCLQVDGNDLIAVLEAMRQARERALAGDGGTVIEFMTYRLTDH 264 Query: 288 SMSDPA-NYRTREEINEMRSNHDPIEQVRKRLL---------HNKWASEGDLKEIEMNVR 337 + +D A YR EE+ + + +P+ ++R L + W +E + I+ V Sbjct: 265 TTADDARRYRGEEEVKQAWT-REPLLRLRTYLTAQGLWDQAQEDAWKAECGAR-IDEEVN 322 Query: 338 KIINNSVE 345 +N V+ Sbjct: 323 AYLNTPVQ 330 >gi|168048109|ref|XP_001776510.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672101|gb|EDQ58643.1| predicted protein [Physcomitrella patens subsp. patens] Length = 467 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 1/283 (0%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F G+EA+ + +L D + YRE G ++ G + + KG+ Sbjct: 152 FYLTTFGEEAINIASAAALNNDDMVYAQYREPGVLMWRGFTLKEFANQCFSNVADYGKGR 211 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S K + +G Q+ G A+A K + FG+GA+++G + + Sbjct: 212 QMPVHYGSAKLNYPTVSSPIGTQLPHAVGAAYAFKMDQKPLCTTTFFGEGASSEGDFHGA 271 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N AA+ + V+++ NN +A+ T S +G ++ + ++VDG D A+ AT Sbjct: 272 MNFAAVLEVPVLFICRNNGFAISTPASEQFKSDGVVAKGHAYGMRSIRVDGNDTLAMYAT 331 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLL 319 + A PI+IE LTYR HS SD + YR +E+ ++ DP+ + R+ L Sbjct: 332 VKAARKMAVEESRPILIEALTYRVGHHSTSDDSGKYRKGDEMQHWKTMRDPVLRFRRWLE 391 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 W +++ + R + ++++ A S + L++D+ Sbjct: 392 GEGWWDTDAEQKLRSDARNEVISALQSAGSQMKQPLTNLFTDV 434 >gi|297704870|ref|XP_002829312.1| PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial-like, partial [Pongo abelii] Length = 365 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 83/297 (27%), Positives = 129/297 (43%), Gaps = 3/297 (1%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 70 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 128 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 129 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 188 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 189 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 248 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S + RG + I ++VDG D+ AV +A A P +IE +TY Sbjct: 249 STPTSEQYRGDGIA-RGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 307 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 R HS SD ++ YR+ +E+N PI ++R LL W E K RK Sbjct: 308 RIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRK 364 >gi|163800431|ref|ZP_02194332.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio sp. AND4] gi|159175874|gb|EDP60668.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio sp. AND4] Length = 364 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 9/265 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y+ M+L R ++ KA L G +G + HL G EA+ + + +L D I YR+ Sbjct: 35 YQDMVLTRIYDNKAVALQRTGKLGTYPSHL--GSEAIGIAVGRALKASDVFIPYYRDMPA 92 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + GV K + G + G GS F +K+ + + Q + G+A A Sbjct: 93 MWCRGVGMEKNLQYWGGDERGSDFAPEGSP--FPSKDLPFCVP--IATQCTHAVGVAAAL 148 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + + +V GDG ++G ES N A WN+ +++V+ NNQ+A+ + A Sbjct: 149 KIQSNHDAALVMCGDGGTSKGDFLESINCAGAWNIPLVFVVNNNQWAISVPRTLQCAAEF 208 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S++ IPG+ VDG DI AV A+ R KG +IE ++YR H+ +D A Sbjct: 209 LSEKAKGAGIPGITVDGNDIIAVFDATMAALDRARKGKGATLIEAVSYRLSDHTTADDAT 268 Query: 295 -YRTREEINEMRSNHDPIEQVRKRL 318 YR+ +E+ + ++PI++++ L Sbjct: 269 RYRSEDEV-RIAWQYEPIQRLKSFL 292 >gi|157869088|ref|XP_001683096.1| 2-oxoisovalerate dehydrogenase alpha subunit [Leishmania major strain Friedlin] gi|68223979|emb|CAJ04806.1| putative 2-oxoisovalerate dehydrogenase alpha subunit [Leishmania major strain Friedlin] Length = 479 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/291 (26%), Positives = 123/291 (42%), Gaps = 20/291 (6%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F G+EA ++G L D++ YRE G + G + +A+ G +KG+ Sbjct: 149 FYMTMFGEEAAVIGAAAGLASNDELFAQYREAGILTYRGYTIPEFIAQCMGNCECDAKGR 208 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY------RR-----------SDKIC 183 +H S + + Q+ G G +A + RR +IC Sbjct: 209 QMPIHYGSKRLHAQMVSSPLATQIPHGAGAGYAFRLENQALERRLPAGTLLSTIPEARIC 268 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 FG+GAA++G + N A+ + ++ + NN YA+ T R V + Sbjct: 269 ATFFGEGAASEGDFHAGLNFASTVGSHTLFFVRNNGYAISTPTHSQYMGDGILSRAVGYG 328 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEIN 302 IP +VDG+D AV T+ KA P+++E LTYR HS SD + YR+R+EI Sbjct: 329 IPAARVDGLDALAVYHTVRKAREMILNSHRPVLVEALTYRLSHHSTSDDSTAYRSRDEIE 388 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 PIE+ + W + +E+ R + + E + +K P Sbjct: 389 HFAETFSPIERFEHFVTARGWWTPEQSREVVERTRSEVLS--ELRRQEKLP 437 >gi|289751106|ref|ZP_06510484.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis T92] gi|289691693|gb|EFD59122.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis T92] Length = 259 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/160 (35%), Positives = 93/160 (58%), Gaps = 2/160 (1%) Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 +G Q G A A + D + V GDGA ++G V+E+ N AA++ ++ ++NNQ Sbjct: 34 IGTQTLHAVGAAMAAQRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQ 93 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+ VSR +A + + + + + +PG++VDG D+ A A M +A A RA GP +IE Sbjct: 94 WAISMPVSRQTAAPSIAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEA 153 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 +TYR H+ + DP YR++EE++ + DPI + R L Sbjct: 154 VTYRLGPHTTADDPTRYRSQEEVDRW-ATLDPIPRYRTYL 192 >gi|254507939|ref|ZP_05120068.1| pyruvate dehydrogenase E1 component, alpha subunit [Vibrio parahaemolyticus 16] gi|219549175|gb|EED26171.1| pyruvate dehydrogenase E1 component, alpha subunit [Vibrio parahaemolyticus 16] Length = 363 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 82/297 (27%), Positives = 138/297 (46%), Gaps = 22/297 (7%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y+ M++ R ++ KA L G +G + HL G EA V + ++ D I YR+ Sbjct: 35 YKDMVMSRTYDNKAVALQRTGKLGTYPSHL--GAEAYGVAIGHAMHPNDVFIPYYRDMPA 92 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH----GIVGAQVSLGTGI 170 + GV K + G + G F+ K+G + Q + G+ Sbjct: 93 MWVRGVPMEKNLQYWGGDERGSD---------FNAKDGTPSADLPFCVPIATQCTHAVGV 143 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A K + ++ +V GDGA ++G ES N A WNL +++V+ NNQ+A+ Sbjct: 144 ASALKIEGNHRVALVTCGDGATSKGDFLESINCAGAWNLPLVFVVNNNQWAISVPRQLQC 203 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A +++ I G+ VDG DI A+ + A+ R KGP +IE ++YR H+ + Sbjct: 204 AADFLAEKAKGAGIEGITVDGNDIVAMHDAVLTALDRARKGKGPTLIEAISYRLSDHTTA 263 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHN-KWASEGD---LKEIEMNVRKIINN 342 D A YR+ +E+ + ++PI ++++ L W D LK + V + + N Sbjct: 264 DDATRYRSDDELKQAW-QYEPISRLKQHLSQTGAWDESQDESWLKACKETVEQAVAN 319 >gi|317404981|gb|EFV85342.1| 2-oxoisovalerate dehydrogenase alpha subunit [Achromobacter xylosoxidans C54] Length = 410 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 81/294 (27%), Positives = 132/294 (44%), Gaps = 17/294 (5%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ ++L +GD YR+ +LA V +M +L + KG+ Sbjct: 105 FYMQSLGEEAIGSAHALALEQGDMCFPTYRQQSILLARDVSLVTMMCQLMSNERDPLKGR 164 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 + +NGF+ G + Q G A+ + +I GDGA + + + Sbjct: 165 QLPVMYSDRENGFFTISGNLATQFIQAVGWGMASAIKGDTRIASGWIGDGATAEADFHTA 224 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKA 259 A ++ VI + NNQ+A+ T + A + F+ RGV I ++VDG D AV A Sbjct: 225 LTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGATFAGRGVGCGIASLRVDGNDFLAVYA 284 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 A R + GP +IE +TYR HS S DP+ YR ++ + DPIE+ +K L Sbjct: 285 ASRWAAERARRNLGPTLIEWVTYRAGPHSTSDDPSKYRPGDDWSHFPLG-DPIERFKKHL 343 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE----------PDPAELYSDI 362 + SE + VR ++ ++ AQ + E P A ++ D+ Sbjct: 344 ILRGIWSEAEHDA----VRAELDAEIQAAQKEAESYGTLVDGHVPSAASIFEDV 393 >gi|239814017|ref|YP_002942927.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Variovorax paradoxus S110] gi|239800594|gb|ACS17661.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Variovorax paradoxus S110] Length = 413 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 88/340 (25%), Positives = 151/340 (44%), Gaps = 11/340 (3%) Query: 18 NPSVSAKRAATSSVDCVDIPFLE------GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQ 71 P V A A TS + + L+ G E + E R M+ R F+ + Sbjct: 37 KPPVDASPADTSDLAYTLVRVLDDEGRAVGPWAPEADPELLRRGLRAMMKTRAFDARMLI 96 Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA-CGVDASKIMAELT 130 + + C+G+EA+ G + L +GD YR+ G +LA V +++ EL Sbjct: 97 AQRQKKISFYIQ-CLGEEAIATGHALVLQQGDMCFPTYRQQGLLLARDDVTLLELICELM 155 Query: 131 GRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDG 190 + KG+ + + GF+ G + Q G A+ + +I GDG Sbjct: 156 SNERDPLKGRQLPVCYSMKRAGFFSISGNLATQFIQAVGWGMASAIKGDTRIASGWIGDG 215 Query: 191 AANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQV 249 A + + + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++V Sbjct: 216 ATAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEATTFAARGVGCGIASLRV 275 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNH 308 DG D AV A A R++ GP +IE +TYR HS S DP+ YR ++ Sbjct: 276 DGNDFLAVLAASRWAAERARSNLGPTLIEWVTYRAGAHSTSDDPSRYRPADDWAHFPLG- 334 Query: 309 DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 DPI ++ + L S+ + ++ + ++ +N +++ A+ Sbjct: 335 DPIPRLAQHLRSIGAWSQQEHEQTQADLEAQVNTALKEAE 374 >gi|153833131|ref|ZP_01985798.1| pyruvate dehydrogenase E1 component, alpha subunit [Vibrio harveyi HY01] gi|148870561|gb|EDL69469.1| pyruvate dehydrogenase E1 component, alpha subunit [Vibrio harveyi HY01] Length = 364 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 80/297 (26%), Positives = 146/297 (49%), Gaps = 19/297 (6%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y+ M+L R ++ KA L G +G + HL G EA+ + + +L D + YR+ Sbjct: 35 YQDMVLTRTYDNKAVALQRTGKLGTYPSHL--GSEAIGIAVGRALKASDVFVPYYRDMPA 92 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + G+ K + G + G GS F +++ + + Q + G+A A Sbjct: 93 MWCRGIGMEKNLQYWGGDERGSDFAPEGSP--FPSRDLPFCVP--IATQCTHAVGVASAL 148 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + + + +V GDGA ++G ES N A WN+ +++++ NNQ+A+ + A Sbjct: 149 KIQGNHEAALVMCGDGATSKGDFLESVNCAGAWNIPLVFIVNNNQWAISVPRTLQCAAEF 208 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S++ IPG+ VDG D+ AV A+ R KG +IE ++YR H+ +D A Sbjct: 209 LSEKAKGAGIPGITVDGNDVVAVFDATMTALDRARKGKGATLIEAVSYRLSDHTTADDAT 268 Query: 295 -YRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDL-------KEIEMNVRKIIN 341 YR +E+ + ++P+ ++ K L N+ W++E + +++E+ V + +N Sbjct: 269 RYRNEDEV-QTAWQYEPVRRL-KAFLTNQGVWSNEKEQEWQAHCKEQVELAVERYLN 323 >gi|170053106|ref|XP_001862522.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial [Culex quinquefasciatus] gi|167873777|gb|EDS37160.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial [Culex quinquefasciatus] Length = 438 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 83/314 (26%), Positives = 143/314 (45%), Gaps = 9/314 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 +R M+L+ ++ + G + F G+EA +G +L+ D + YRE G + Sbjct: 98 FRDMVLLNTMDKILYESQRQGRIS-FYMTNFGEEASHIGSAAALSPEDWVYGQYREAGVL 156 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 + G S + + G + KG+ +H S K F +G Q+ G A+A K Sbjct: 157 VWRGFTISDFINQCYGNREDEGKGRQMPVHYGSKKLNFVTISSPLGTQIPQAVGAAYAFK 216 Query: 176 YRRSD--KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 R+ D ++ + FG+GAA++G + +FN AA + V+ NN +A+ T Sbjct: 217 -RQPDNQRVVITYFGEGAASEGDAHAAFNFAATLDCPVMLFCRNNGFAISTPSKEQYRGD 275 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + R + I ++ DG DI AV A Y + PI++E + YR HS SD + Sbjct: 276 GIAGRAAGYGIATLRFDGTDIFAVYNATKMAREYVLKNNKPIVMEAMQYRISHHSTSDDS 335 Query: 294 N-YRTREEINEMRSNHDPIEQVRKRLLHNKW---ASEG-DLKEIEMNVRKIINNSVEFAQ 348 YR E++ + PI +++ + W A+EG +K I V IN S + + Sbjct: 336 TAYRPAEDLEIWNTTEHPISKLKNFMKQRGWFDEAAEGAHVKAIRKQVLAQINQSEKIPK 395 Query: 349 SDKEPDPAELYSDI 362 +D ++Y ++ Sbjct: 396 ADWRETFQDVYHEM 409 >gi|215427880|ref|ZP_03425799.1| pyruvate dehydrogenase E1 component alpha subunit pdhA [Mycobacterium tuberculosis T92] gi|289444027|ref|ZP_06433771.1| pyruvate dehydrogenase E1 component pdhA [Mycobacterium tuberculosis T46] gi|289416946|gb|EFD14186.1| pyruvate dehydrogenase E1 component pdhA [Mycobacterium tuberculosis T46] Length = 230 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/160 (35%), Positives = 93/160 (58%), Gaps = 2/160 (1%) Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 +G Q G A A + D + V GDGA ++G V+E+ N AA++ ++ ++NNQ Sbjct: 5 IGTQTLHAVGAAMAAQRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQ 64 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+ VSR +A + + + + + +PG++VDG D+ A A M +A A RA GP +IE Sbjct: 65 WAISMPVSRQTAAPSIAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEA 124 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 +TYR H+ + DP YR++EE++ + DPI + R L Sbjct: 125 VTYRLGPHTTADDPTRYRSQEEVDRW-ATLDPIPRYRTYL 163 >gi|288921354|ref|ZP_06415635.1| Pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EUN1f] gi|288347265|gb|EFC81561.1| Pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EUN1f] Length = 374 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 85/287 (29%), Positives = 139/287 (48%), Gaps = 17/287 (5%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + Q S YR M+ RR +E+A L G + + L GQEA VG + GD + Sbjct: 35 DSRQTESFYREMVRARRLDEEATALQRQGELVLWIPLR-GQEAAQVGSAAAARPGDFLFP 93 Query: 108 AYREHGHILACGVDASKIMAELTG-RQGGISK---GKGGSMHMFSTKNGFYGGHGIVGAQ 163 +YREH G+ A +++ L G GG + + +++ G+G+ G + Sbjct: 94 SYREHAVAWHRGIPAVEVLRLLRGVTHGGWDPELYKVANYVLVLASQTLHAVGYGL-GVR 152 Query: 164 VSLGT--------GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + G G A ++ +V GDGA +QG E+F AA + + V++ Sbjct: 153 IDEGAAREGAAREGAAGEGTAVGDPQVVMVYLGDGAMSQGDANEAFVWAASFAVPVVFFC 212 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +NNQ+A+ T SR + ++R F PG++VDG D+ AV A A+ + R+ +GP+ Sbjct: 213 QNNQWAISTP-SRRQSPVPLARRAEGFGFPGVRVDGNDVLAVHAVTSWALEHARSGQGPV 271 Query: 276 IIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHN 321 ++E TYR H+ SD A Y+ E+ DPI+++ + L H Sbjct: 272 LVEANTYRMAPHTTSDDATRYQEPAEVAWW-GARDPIDRLERLLAHT 317 >gi|184153263|ref|YP_001841604.1| pyruvate dehydrogenase complex E1 component alpha subunit [Lactobacillus reuteri JCM 1112] gi|325682604|ref|ZP_08162121.1| pyruvate dehydrogenase complex E1 component alpha subunit [Lactobacillus reuteri MM4-1A] gi|183224607|dbj|BAG25124.1| pyruvate dehydrogenase complex E1 component alpha subunit [Lactobacillus reuteri JCM 1112] gi|324978443|gb|EGC15393.1| pyruvate dehydrogenase complex E1 component alpha subunit [Lactobacillus reuteri MM4-1A] Length = 371 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 17/291 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ F+ E + + M+ R E+ G +G F G+EA +G + + D Sbjct: 42 MANFSDELLVDLMKKMVWERALHEQTMSFSKQGRLG-FYAPTWGEEASEMGTAAAFKKQD 100 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + AYR+ ++ G +++ G G ++F + I+GAQ Sbjct: 101 FLFPAYRDLPQLIQHGATVAQMYLWSKGHIKG---------NLFDARA--LRPQIIIGAQ 149 Query: 164 -VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V + G K D + G+G ++QG YE N A + + +++I+NN +A+ Sbjct: 150 MVEMAGGALGIKKNGEKDTVAYAYTGEGGSSQGDTYEGMNFAGAFQVPGVFIIQNNGWAI 209 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +++ V+ IPG+QVDGMD+ A +A + A GP++IE LTY Sbjct: 210 SFPRKLQTEAQTIAQKAVAAGIPGVQVDGMDVLACYEVAKEAREFAAAGNGPVLIETLTY 269 Query: 283 RYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLK 330 R+ HS + DP YRT +E + DP+ ++RK L W+ E + K Sbjct: 270 RFGAHSSAGDDPTRYRTEDETKPW-FDKDPLIRLRKYLTKKGLWSEEEEQK 319 >gi|148543863|ref|YP_001271233.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus reuteri DSM 20016] gi|227364769|ref|ZP_03848818.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus reuteri MM2-3] gi|148530897|gb|ABQ82896.1| Pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus reuteri DSM 20016] gi|227070228|gb|EEI08602.1| pyruvate dehydrogenase (acetyl-transferring) [Lactobacillus reuteri MM2-3] Length = 368 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 17/291 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ F+ E + + M+ R E+ G +G F G+EA +G + + D Sbjct: 39 MANFSDELLVDLMKKMVWERALHEQTMSFSKQGRLG-FYAPTWGEEASEMGTAAAFKKQD 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + AYR+ ++ G +++ G G ++F + I+GAQ Sbjct: 98 FLFPAYRDLPQLIQHGATVAQMYLWSKGHIKG---------NLFDARA--LRPQIIIGAQ 146 Query: 164 -VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V + G K D + G+G ++QG YE N A + + +++I+NN +A+ Sbjct: 147 MVEMAGGALGIKKNGEKDTVAYAYTGEGGSSQGDTYEGMNFAGAFQVPGVFIIQNNGWAI 206 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +++ V+ IPG+QVDGMD+ A +A + A GP++IE LTY Sbjct: 207 SFPRKLQTEAQTIAQKAVAAGIPGVQVDGMDVLACYEVAKEAREFAAAGNGPVLIETLTY 266 Query: 283 RYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLK 330 R+ HS + DP YRT +E + DP+ ++RK L W+ E + K Sbjct: 267 RFGAHSSAGDDPTRYRTEDETKPW-FDKDPLIRLRKYLTKKGLWSEEEEQK 316 >gi|324558612|gb|ADY49835.1| Pyruvate dehydrogenase E1 component subunit alpha type I [Ascaris suum] Length = 85 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 52/80 (65%), Positives = 61/80 (76%), Gaps = 2/80 (2%) Query: 139 GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 GKGGSMHM+ FYGG+GIVGAQ LGTG+AFA K R+ +C FGDGAANQGQ++ Sbjct: 7 GKGGSMHMYGDN--FYGGNGIVGAQQPLGTGVAFAMKCRKMKNVCFTLFGDGAANQGQLF 64 Query: 199 ESFNIAALWNLNVIYVIENN 218 ES NIA LWN+ V+YV ENN Sbjct: 65 ESMNIAKLWNIPVVYVCENN 84 >gi|28900502|ref|NP_800157.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio parahaemolyticus RIMD 2210633] gi|260365654|ref|ZP_05778175.1| pyruvate dehydrogenase E1 component, alpha subunit [Vibrio parahaemolyticus K5030] gi|260877454|ref|ZP_05889809.1| pyruvate dehydrogenase E1 component, alpha subunit [Vibrio parahaemolyticus AN-5034] gi|260898935|ref|ZP_05907376.1| pyruvate dehydrogenase E1 component, alpha subunit [Vibrio parahaemolyticus Peru-466] gi|260901231|ref|ZP_05909626.1| pyruvate dehydrogenase E1 component, alpha subunit [Vibrio parahaemolyticus AQ4037] gi|28808882|dbj|BAC61990.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio parahaemolyticus RIMD 2210633] gi|308089200|gb|EFO38895.1| pyruvate dehydrogenase E1 component, alpha subunit [Vibrio parahaemolyticus Peru-466] gi|308090939|gb|EFO40634.1| pyruvate dehydrogenase E1 component, alpha subunit [Vibrio parahaemolyticus AN-5034] gi|308106818|gb|EFO44358.1| pyruvate dehydrogenase E1 component, alpha subunit [Vibrio parahaemolyticus AQ4037] gi|308111438|gb|EFO48978.1| pyruvate dehydrogenase E1 component, alpha subunit [Vibrio parahaemolyticus K5030] gi|328470451|gb|EGF41362.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio parahaemolyticus 10329] Length = 364 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 82/296 (27%), Positives = 142/296 (47%), Gaps = 17/296 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR M+L R +++KA L G +G + HL G EA+ + + +L D + YR+ Sbjct: 35 YRDMVLTRTYDQKAVALQRTGKLGTYPSHL--GSEAIGIAVGRALKTDDVFVPYYRDMPA 92 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + G+ K + G + G GS + S F + Q + G+A A Sbjct: 93 MWCRGIGMEKNLQYWGGDERGSDFAPEGS-PIPSRDLPFCVP---IATQCTHAVGVASAL 148 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + + + +V GDG ++G ES N A WN+ +++V+ NNQ+A+ S A Sbjct: 149 KIQGNHEAALVMCGDGGTSKGDFLESINCAGTWNIPLVFVVNNNQWAISVPRSLQCAAEF 208 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S++ IPG+ VDG D+ A+ A+ R KG +IE ++YR H+ +D A Sbjct: 209 LSEKAKGAGIPGITVDGNDVVAMYDATMTALERARKGKGATLIEAVSYRLSDHTTADDAT 268 Query: 295 -YRTREEINEMRSNHDPIEQVRKRLLHN-KWASE------GDLKE-IEMNVRKIIN 341 YR +++ + +P+ +++ L++ W+ E D KE +E+ V + +N Sbjct: 269 RYRNADDV-QTAWQFEPVSRLKTFLINQGAWSDEQEQQWQSDCKEQVELAVERYLN 323 >gi|307189817|gb|EFN74089.1| 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial [Camponotus floridanus] Length = 334 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 9/280 (3%) Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 I E +G+ T Q I + +L G K M + G KGK +H Sbjct: 26 ITNEPQFLGINNVFTNNIQFIN---QESVLLHRGYPLLKFMNQCYGNCDDEGKGKQMPIH 82 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIA 204 S + F +G Q+ G A+A K + + CVVC FG+GAA++G + +FN A Sbjct: 83 YGSKEFNFMTISSPLGTQLPQAAGAAYAFKLDKRNA-CVVCYFGEGAASEGDAHAAFNFA 141 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 A + +I++ NN YA+ T V + +G ++ I ++VDG D+ AV A Sbjct: 142 ATLSCPIIFICRNNGYAISTPVFEQFKGDGIAAKGPAYGINTIRVDGNDVLAVYYATKNA 201 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLH-NK 322 +C + P++IE +TYR HS SD + YR+ +EI + P+ + R L Sbjct: 202 RDFCIKQQKPVLIEAMTYRIGHHSTSDDSTAYRSSDEIAQWNI-QTPLAKFRFYLESLGL 260 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 W E + + I +I++ E A+ +P EL++D+ Sbjct: 261 WCQEKEQELINSTKEEILHFFKE-AEKKSKPYWKELFTDV 299 >gi|226228203|ref|YP_002762309.1| 2-oxo acid dehydrogenase E1 component alpha/beta subunit [Gemmatimonas aurantiaca T-27] gi|226091394|dbj|BAH39839.1| 2-oxo acid dehydrogenase E1 component alpha/beta subunit [Gemmatimonas aurantiaca T-27] Length = 714 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 93/359 (25%), Positives = 153/359 (42%), Gaps = 32/359 (8%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 MA + S R A +S P L +++Q L A+R+M RR ++K QL Sbjct: 1 MATSTRPSRARQAATSEPAPGAPAL--------SRDQLLDAFRVMYTSRRLDDKEIQLKR 52 Query: 75 MGMVGGFCHLC-IGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGR 132 + F + G EA++ ++ D YR+ L G+ ++++ G Sbjct: 53 QNRI--FFQISGAGHEAIMTAAGLATKPTYDWFYLYYRDRALCLQLGMTPAEMLYSAVG- 109 Query: 133 QGGISKGKGG------------SMHMFSTKNGFYGGHGIVGAQVSL-GTGIAFANKYRRS 179 I GG ++ S+ G + A+ +L A+ Sbjct: 110 -AAIDPNSGGRQMPSHWGHKDLNIVSVSSPTGTQFLQAVGNAEATLRAAKTDLADDSFHG 168 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 D++ +V GDG ++G+ +ES N A+ L V+Y++E+N YA+ V +A + SK Sbjct: 169 DEVTIVTTGDGTTSEGEFWESLNTASNLKLPVVYIVEDNGYAISVPVEVNTAGGSISKLV 228 Query: 240 VSFNIPGM---QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 SF PG+ +VDG D+ A M +AVAY R KGP ++ R HS+SD + Sbjct: 229 SSF--PGLYIQEVDGCDLLASYDVMQRAVAYARERKGPALVHAKVIRPYSHSLSDDEVFY 286 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 E E + DPI L+ A+E +++ I I + + A +P P Sbjct: 287 RPPEEREADAARDPITTFPAWLIAEGHATEAEIQAIRDAADAEILAATDDALEQPQPSP 345 >gi|15835233|ref|NP_296992.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Chlamydia muridarum Nigg] gi|270285406|ref|ZP_06194800.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Chlamydia muridarum Nigg] gi|270289420|ref|ZP_06195722.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Chlamydia muridarum Weiss] gi|301336803|ref|ZP_07225005.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Chlamydia muridarum MopnTet14] gi|7190657|gb|AAF39449.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Chlamydia muridarum Nigg] Length = 678 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 87/299 (29%), Positives = 139/299 (46%), Gaps = 7/299 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHL-CIGQEAVIVGMKMSLTEG-DQMITAYREHG 113 +RL +R E K L GG L C G E V SL G D YR+ G Sbjct: 16 FRLAWTLRFSERKMLLLSRQSGSGGSFQLSCAGHELAGVVAAKSLIPGKDWAFPYYRDQG 75 Query: 114 HILACGVDASKIMAELTGRQG-GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L G D S+I A R S G+ H K +VG Q G A+ Sbjct: 76 FPLGLGCDLSEIFASFLARTTQNHSDGRMMPYHYSHKKLRICCQSSVVGTQFLQAAGRAW 135 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K +++ V GDG+ +QG+ +E N A+L L ++ VI+NNQ+A+ + Sbjct: 136 AVKNSGKNEVVYVSGGDGSTSQGEFHEMLNFASLHQLPLVIVIQNNQWAISVPFADQCG- 194 Query: 233 TNFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + G S++ + +VDG D+ A+ T D AV+ R H P ++ + R HS SD Sbjct: 195 ADLVALGKSYSGLATYKVDGGDLSALTQTFDCAVSDARHHHIPALVIVDVVRLESHSNSD 254 Query: 292 -PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 YR+ EE+ + DP+ ++ K L+ + ++ +++I+ +++ I+ + E A+S Sbjct: 255 NQTKYRSEEELLYCQ-EQDPLVRLEKSLIDDFGVAQETIEQIKEELQETISKACELAES 312 >gi|167840924|ref|ZP_02467608.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia thailandensis MSMB43] Length = 410 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 75/265 (28%), Positives = 120/265 (45%), Gaps = 4/265 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R ML R F+ + Q+ F C+G+EA+ V ++L GD YR+ G ++ Sbjct: 82 RAMLKTRIFDARM-QIAQRQKKISFYMQCLGEEAIAVAHTLALERGDMCFPTYRQQGILM 140 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 +M +L KG+ + S GF+ G + Q G A A+ Sbjct: 141 VRDYSLVDMMCQLMSNARDPLKGRQLPVMYSSRDAGFFSISGNLATQFIQAVGWAMASAI 200 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNF 235 + +I GDGA + + + A ++ VI + NNQ+A+ T + A + F Sbjct: 201 KGDTRIASAWIGDGATAEADFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGATF 260 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + RGV I ++VDG D AV A A R + GP +IE +TYR HS S DP Sbjct: 261 AGRGVGCGIASLRVDGNDFLAVYAASRWAAERARRNLGPTLIEWVTYRAGPHSTSDDPTK 320 Query: 295 YRTREEINEMRSNHDPIEQVRKRLL 319 YR ++ DP+E++++ ++ Sbjct: 321 YRPGDDWTHFPLG-DPLERLKRHMV 344 >gi|326503402|dbj|BAJ86207.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 249 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 55/130 (42%), Positives = 75/130 (57%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +E L Y M+L R E+ Q+Y G + GF HL GQEAV +G L + D +++ Sbjct: 67 TREDALELYEDMILGRNSEDMCAQMYYRGKMFGFVHLYNGQEAVSIGFIKQLNQPDCVVS 126 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+H H L+ GV A ++MAEL G+ G +G+GGSMHMFS GG + + + Sbjct: 127 TYRDHVHALSKGVPAREVMAELFGKATGCCRGQGGSMHMFSEPRNLLGGFAFISEGIPVA 186 Query: 168 TGIAFANKYR 177 TG AFA KYR Sbjct: 187 TGAAFAAKYR 196 >gi|312069956|ref|XP_003137923.1| 2-oxoisovalerate dehydrogenase alpha subunit [Loa loa] gi|307766909|gb|EFO26143.1| 2-oxoisovalerate dehydrogenase alpha subunit [Loa loa] Length = 341 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 2/277 (0%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EA +G + + D M YRE G +L G M + G I GK +H Sbjct: 32 GEEATQIGSAAGIHDDDLMYGQYREAGSLLYRGFSLENFMNQCYGNAKDIGGGKQMPVHY 91 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 S ++ F + Q+ G A+A K R+ +I + FG+GA+++G + + N+A+ Sbjct: 92 GSVEHHFVTISSTLATQLPQAVGSAYAFKRERNGRIVMAYFGEGASSEGDTHGAMNMAST 151 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 +I+ NN YA+ T + + + + I ++VDG D+ AV KA Sbjct: 152 LKCPIIFFCRNNGYAISTPTTEQYGGDGVAGKAFGYGIHVIRVDGNDLIAVYDAT-KAAR 210 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 P++IE +TYR HS SD + YR EE+N + +P+ + L + W S Sbjct: 211 KIAEQNEPVLIEAMTYRLGHHSTSDDSTVYRPSEEVNIWQEKDNPVTRFCTFLRNKGWWS 270 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + + +++ I A+ +P+ ++ D+ Sbjct: 271 DEEDMAYRQKIQEEIMQVFLCAEKVSKPNILTMFDDV 307 >gi|21229907|ref|NP_635824.1| pyruvate dehydrogenase E1 alpha subunit [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766784|ref|YP_241546.1| pyruvate dehydrogenase E1 alpha subunit [Xanthomonas campestris pv. campestris str. 8004] gi|188989860|ref|YP_001901870.1| pyruvate dehydrogenase E1 component alpha subunit [Xanthomonas campestris pv. campestris str. B100] gi|21111414|gb|AAM39748.1| pyruvate dehydrogenase E1 alpha subunit [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572116|gb|AAY47526.1| pyruvate dehydrogenase E1 alpha subunit [Xanthomonas campestris pv. campestris str. 8004] gi|167731620|emb|CAP49798.1| pyruvate dehydrogenase E1 component alpha subunit [Xanthomonas campestris pv. campestris] Length = 362 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 80/309 (25%), Positives = 141/309 (45%), Gaps = 21/309 (6%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N +Q L+ ++ ML +R F+ K+ L G +G + +G EA VG+ S+ GD Sbjct: 32 NPQQLLALFKRMLFVRTFDSKSIALQRTGKLGTYAA-SLGHEATHVGIGASMRSGDVFAP 90 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM-FSTKNGFYGGHGIVGAQVSL 166 +YRE+G + GV ++ G + G + + F + Q Sbjct: 91 SYREYGTMFERGVRPRDVLLYWGGDERGSDYPRDADAAIDFPICVP-------ISTQCLH 143 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A + K + ++ V C GDG +++ Y + N A + L +I + NN +A+ Sbjct: 144 AAGAALSFKLQGKAQVAVACCGDGGSSKTDFYAALNSAGAYTLPLILCVINNGWAISVPR 203 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S + +++G++ + +QVDG D+ AV M +A A A G +IE LTYR Sbjct: 204 SAQTGAQTLAQKGLAGGLHCLQVDGNDLIAVLEAMRQARARALAGDGGTVIEFLTYRLTD 263 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLL---------HNKWASEGDLKEIEMNV 336 H+ +D A YR +E+ + + +P+ ++R+ L W +E + I+ V Sbjct: 264 HTTADDARRYRGEDEVKQAWT-REPMLRLRRYLTAQGLWDEAQEEAWKAECGAR-IDEEV 321 Query: 337 RKIINNSVE 345 +N V+ Sbjct: 322 NAYLNTPVQ 330 >gi|269961913|ref|ZP_06176269.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833361|gb|EEZ87464.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 380 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 13/294 (4%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y+ M+L R ++ KA L G +G + HL G EAV + + +L D + YR+ Sbjct: 51 YQDMVLTRTYDNKAVALQRTGKLGTYPSHL--GSEAVGIAVGRALKASDVFVPYYRDMPA 108 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + G+ K + G + G GS F +K+ + + Q + G+A A Sbjct: 109 MWCRGIGMEKNLQYWGGDERGSDFAPEGSP--FPSKDLPFCVP--IATQCTHAVGVAAAL 164 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + + +V GDG ++G ES N A WN+ +++V+ NNQ+A+ A Sbjct: 165 KIQGNHDAALVMCGDGGTSKGDFLESINCAGAWNIPLVFVVNNNQWAISVPRCLQCAAEF 224 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S++ IPG+ VDG D+ AV A+ R KG +IE ++YR H+ +D A Sbjct: 225 LSEKAKGAGIPGITVDGNDVVAVFDATINALERARKGKGATLIEAVSYRLSDHTTADDAT 284 Query: 295 -YRTREEINEMRSNHDPIEQVRKRLLHNK--WASEGDLKEIEMNVRKIINNSVE 345 YR +E+ + ++P+ ++ K L N+ W +E + +E + + ++ + +VE Sbjct: 285 RYRNEDEV-QTAWQYEPVRRL-KAFLTNQGVWNNEKE-QEWQTHCKEQVELAVE 335 >gi|156102723|ref|XP_001617054.1| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial [Plasmodium vivax SaI-1] gi|148805928|gb|EDL47327.1| 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial, putative [Plasmodium vivax] Length = 431 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 7/286 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI--GQEAVIVGMKMSLTEGDQ 104 F +E+ + Y+ M+ ++E YG+ G + G+E + G+ LT D Sbjct: 81 FEEEEIVKLYKQMVEFSIWDE---IFYGIQRQGRISFYIVNDGEEGIQFGLGKVLTPDDH 137 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + YRE G +L+ G D + I+ +L G + KG+ + S K + + +Q+ Sbjct: 138 LYCQYRETGILLSRGFDYADIINQLFGNKYDEGKGRQMCICYTSKKLNIHTITTPLASQL 197 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 S G +A K + + GDG++++G Y + N AA+ +++ +NN YA+ T Sbjct: 198 SHAAGCGYALKLKNEKAVAATFCGDGSSSEGDFYAALNFAAVRESQTMFICKNNLYAIST 257 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S+ + R ++ I ++VDG D+ A K C P+ +E + YRY Sbjct: 258 SIKDQYRGDGVAPRALALGIESVRVDGNDLFATYLAAKKMREICTEESKPVFMEFMAYRY 317 Query: 285 RGHSMSDPAN-YRTREEINEMRSNH-DPIEQVRKRLLHNKWASEGD 328 HS SD ++ YR +EE + + PI ++ L + K ++ D Sbjct: 318 GHHSTSDDSSLYRPKEENDAWKKEGVHPISRLFLYLKNKKLYTDKD 363 >gi|57209619|emb|CAI41289.1| pyruvate dehydrogenase (lipoamide) alpha 1 [Homo sapiens] Length = 180 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 72/140 (51%), Positives = 92/140 (65%), Gaps = 4/140 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 34 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 93 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 94 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 153 Query: 145 HMFSTKNGFYGGHGIVGAQV 164 HM++ KN FYGG+GIVGAQV Sbjct: 154 HMYA-KN-FYGGNGIVGAQV 171 >gi|293363256|ref|ZP_06610140.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycoplasma alligatoris A21JP2] gi|292553115|gb|EFF41864.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycoplasma alligatoris A21JP2] Length = 372 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 136/289 (47%), Gaps = 13/289 (4%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQ 104 + + E+ + AY+ M+L R+ + QL G + F IG+EA+ V ++ + D Sbjct: 39 QLSNEKLVEAYKWMVLSRQQDVYMLQLQRQGRMLTFAP-NIGEEALQVATAFAMDKKKDW 97 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + A+R + +L GV M G + G + T + + ++ +Q+ Sbjct: 98 FLPAFRSNAAMLVLGVPILNQMIYWNGNEKG---------SIMPTDSNVMPVNIVIASQI 148 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 S G+AFA K +++ + V G+G +G+ E N AA+ ++ + NNQ+A+ T Sbjct: 149 SHNAGVAFALKQQKTGGVAVTFIGNGGTTEGEFAEGVNFAAVQEWPAVFCVNNNQWAIST 208 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + + + +F G+ VDG D+ A + +A+ Y R P+I+E LT+R Sbjct: 209 PNHFESISSTIAAKAHAFGCAGLLVDGNDLLASYDVIKEAMDYARNESKPVIVEFLTWRQ 268 Query: 285 RGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 H+ SD P YR+ + E +P+ ++ L K + +K+I Sbjct: 269 GPHTTSDNPRIYRSENDEKE-NEKWEPMHRIENYLKSVKALDDEQIKKI 316 >gi|254523475|ref|ZP_05135530.1| pyruvate dehydrogenase E1 component, alpha subunit [Stenotrophomonas sp. SKA14] gi|219721066|gb|EED39591.1| pyruvate dehydrogenase E1 component, alpha subunit [Stenotrophomonas sp. SKA14] Length = 360 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 80/317 (25%), Positives = 142/317 (44%), Gaps = 30/317 (9%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 ++ ML +R F+ K+ L G +G + C+G EA VG+ ++ + D +YRE+G + Sbjct: 40 FKQMLFVRTFDSKSIALQRTGKLGTYAA-CLGHEAAHVGIGAAMQKDDVFAPSYREYGAM 98 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHM-FSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 GV ++ G + G G + F + Q G A Sbjct: 99 FMRGVRPHDVLMYWGGDERGNDYGGNAAKDFPFCVP---------ISTQCLHAAGAALKF 149 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + +I V GDG +++ Y + N A + L +I I NN +A+ S + Sbjct: 150 KLNKEPQIAVAVCGDGGSSKTDFYAALNSAGAYKLPLILCIVNNGWAISVPRSAQTGAET 209 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA- 293 +++G++ + +QVDG D+ AV A M++A A G ++E++TYR H+ +D A Sbjct: 210 LAQKGLAGGLHCLQVDGNDLIAVLAAMEQARERALAGDGGTVLELMTYRLSDHTTADDAR 269 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLH---------NKWASEGDLKEIEMNVRKIINNSV 344 YR E+ + +P+ ++RK L++ W +E + ++ V +N V Sbjct: 270 RYRDDAEVKDA-WQREPMLRLRKYLINAGVWSEDEETAWVAECGTR-VDEEVNLYLNTPV 327 Query: 345 E-------FAQSDKEPD 354 + F +D PD Sbjct: 328 QPVEAMFDFLYADPPPD 344 >gi|49240339|gb|AAT58041.1| pyruvate dehydrogenase E1 component alpha subunit [Mycoplasma synoviae] Length = 374 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 85/309 (27%), Positives = 152/309 (49%), Gaps = 20/309 (6%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQ 104 + +Q + Y+ M+L R+ + QL G + F +G+EA+ V +L + D Sbjct: 42 QLTDKQLVEGYKWMVLSRQQDTYMLQLQRQGRMLTFAP-NLGEEALQVATAFALDKKKDW 100 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + A+R + +LA GV M G + G +G ++ + ++G Q+ Sbjct: 101 FLPAFRSNATMLALGVPMVNQMLYWNGNERGSKIPEGVNVTPINI---------VIGTQI 151 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 S G+AFA K ++ + + G+G +G+ YE N A++ + ++ + NNQ+A+ T Sbjct: 152 SQAAGVAFALKQNKTGGVALCFIGNGGTAEGEFYEGMNFASVRSWPAVFCVNNNQWAIST 211 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + + + V+ +PG+ VDG D+ A + +AV + R P+++E +T+R Sbjct: 212 PNHLESISSTIAAKAVAAAVPGVVVDGNDLLASYDVIKEAVEFARKESRPVLVEFVTWRQ 271 Query: 285 RGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 H+ SD P YRT E E + +P+ ++ K LL K ++ KEIE KI +S Sbjct: 272 GPHTTSDNPRVYRTETEEKE-QEVWEPMHRIEKYLLDRKLLTK---KEIE----KIWADS 323 Query: 344 VEFAQSDKE 352 +E A+ E Sbjct: 324 LEVAKKTYE 332 >gi|190576160|ref|YP_001974005.1| putative pyruvate dehydrogenase E1 component subunit alpha [Stenotrophomonas maltophilia K279a] gi|190014082|emb|CAQ47721.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Stenotrophomonas maltophilia K279a] Length = 360 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 80/317 (25%), Positives = 142/317 (44%), Gaps = 30/317 (9%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 ++ ML +R F+ K+ L G +G + C+G EA VG+ ++ + D +YRE+G + Sbjct: 40 FKQMLFVRTFDSKSIALQRTGKLGTYAA-CLGHEAAHVGIGAAMQKDDVFAPSYREYGAM 98 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHM-FSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 GV ++ G + G G + F + Q G A Sbjct: 99 FMRGVRPHDVLMYWGGDERGNDYGGNAAKDFPFCVP---------ISTQCLHAAGAALKF 149 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + +I V GDG +++ Y + N A + L +I I NN +A+ S + Sbjct: 150 KLNKEPQIAVAVCGDGGSSKTDFYAALNSAGAYKLPLILCIVNNGWAISVPRSAQTGAET 209 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA- 293 +++G++ + +QVDG D+ AV A M++A A G ++E++TYR H+ +D A Sbjct: 210 LAQKGLAGGLHCLQVDGNDLIAVLAAMEQARERALAGDGGTVLELMTYRLSDHTTADDAR 269 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLH---------NKWASEGDLKEIEMNVRKIINNSV 344 YR E+ + +P+ ++RK L++ W +E + ++ V +N V Sbjct: 270 RYRDDAEVKDA-WQREPMLRLRKYLINAGVWSEEEETAWVAECGTR-VDEEVNLYLNTPV 327 Query: 345 E-------FAQSDKEPD 354 + F +D PD Sbjct: 328 QPVEAMFDFLYADPPPD 344 >gi|319788109|ref|YP_004147584.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Pseudoxanthomonas suwonensis 11-1] gi|317466621|gb|ADV28353.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Pseudoxanthomonas suwonensis 11-1] Length = 361 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 83/312 (26%), Positives = 137/312 (43%), Gaps = 14/312 (4%) Query: 40 EGFEVSEFNKEQE-----LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG 94 EG +V EF + L ++ ML +R F+ KA L G +G + +G EA VG Sbjct: 18 EGRQVREFPQALRDPAALLPLFKRMLFVRAFDSKAIALQRTGKLGTYAP-SLGHEATHVG 76 Query: 95 MKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 + S+ GD +YRE G + GV I+ G + +G S + Sbjct: 77 IGASMRSGDVFAPSYREIGTMFERGVRPRDILMYWGGDE------RGSDFPRDSDAVADF 130 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 + Q G A A K R + V GDG ++ Y + N A + L ++ Sbjct: 131 PICVPISTQCLHAAGTALAFKLRGQPHVAVATCGDGGTSKTDFYAALNSAGAYQLPLVLG 190 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 + NN +A+ S + +++G++ + +QVDG D+ AV M +A+ R+ +G Sbjct: 191 VVNNGWAISVPRSAQTGAQTLAQKGIAGGLHVLQVDGNDLVAVLDAMGQAMERARSGQGG 250 Query: 275 IIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 +IE LTYR H+ +D A YR E+ +PI ++R L SE + + Sbjct: 251 SVIEFLTYRLSDHTTADDARRYREDAEVKAA-WQREPIARLRTWLTAQGAWSEAEEAAWK 309 Query: 334 MNVRKIINNSVE 345 + + +N V+ Sbjct: 310 IECEREVNAEVD 321 >gi|167574075|ref|ZP_02366949.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia oklahomensis C6786] Length = 410 Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 76/266 (28%), Positives = 126/266 (47%), Gaps = 6/266 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R ML R F+ + Q+ F C+G+EA+ V ++L GD YR+ G ++ Sbjct: 82 RAMLKTRIFDARM-QIAQRQKKISFYMQCLGEEAIAVAHTLALERGDMCFPTYRQQGILM 140 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANK 175 +M +L + KG+ + M+ST+ GF+ G + Q G A A+ Sbjct: 141 VRDYPLVDMMCQLMSNERDPLKGRQLPV-MYSTREAGFFSISGNLATQFIQAVGWAMASA 199 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TN 234 + +I GDGA + + + A ++ VI + NNQ+A+ T + A + Sbjct: 200 IKGDTRIASAWIGDGATAEADFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGAT 259 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 F+ RGV I ++VDG D AV A A R + GP +IE +TYR HS S DP+ Sbjct: 260 FAGRGVGCGIASLRVDGNDFLAVYAASRWAAERARRNLGPTLIEWVTYRGGPHSTSDDPS 319 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLL 319 YR ++ DP++++++ ++ Sbjct: 320 KYRPGDDWTYFPLG-DPLDRLKRHMI 344 >gi|89076018|ref|ZP_01162381.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Photobacterium sp. SKA34] gi|89048253|gb|EAR53834.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Photobacterium sp. SKA34] Length = 369 Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 80/293 (27%), Positives = 148/293 (50%), Gaps = 10/293 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR M+L+R +++KA L G +G + HL G EA+ + + ++ D + YR+ Sbjct: 35 YRDMVLVRHYDKKAIALQRTGKLGTYPSHL--GSEAIGIAIGSAMQSTDVLAPYYRDMPT 92 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + A G+ + + G + G S S + + N + Q + GIA A Sbjct: 93 LWARGISMLQNLQYWGGDELG-SNFPSRSPDI--SHNDDMPFCVPISTQCTHAVGIAAAM 149 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + ++ V GDGA ++G ES N A +WN+ +++VI NNQ+A+ + + Sbjct: 150 KIKGLHRVTVATCGDGATSKGDFLESLNCAGVWNIPLVFVINNNQWAISVPLHLQCHAEH 209 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + I G+ VDG DI A+ + +++ R KG +IE ++YR H+ +D A+ Sbjct: 210 LVDKAKGAGIKGIMVDGNDIVAMYDALLQSLDQARKGKGATLIEAVSYRLCDHTTADDAS 269 Query: 295 -YRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGDLKEIEMNVRKIINNSVE 345 YR EE+ + +DPI +++ L++ N W+ + + +++ ++ IN +V+ Sbjct: 270 RYRDDEEVKQAW-QYDPIARLKTYLINQNLWSEVEESQWLDICYQR-INQAVD 320 >gi|115380324|ref|ZP_01467330.1| probable 3-methyl-2-oxobutanoate dehydrogenase alpha chain [Stigmatella aurantiaca DW4/3-1] gi|115362671|gb|EAU61900.1| probable 3-methyl-2-oxobutanoate dehydrogenase alpha chain [Stigmatella aurantiaca DW4/3-1] Length = 272 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 2/195 (1%) Query: 126 MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVV 185 +A+L G G +KG+ H FS + +G Q+ G A+A + + D + + Sbjct: 12 LAQLFGNSGDEAKGRQMPAHQFSRRVNQVSWSSCIGTQLPQAVGAAWAARRKGHDTVVLA 71 Query: 186 CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIP 245 C GDGA + G + + N A + +++ +NN +++ +S+ + + + ++ P Sbjct: 72 CLGDGATSTGDFHAAMNFAGVLQAPAVFLCQNNHWSISLHISQQTKSETLALKASAYGFP 131 Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEM 304 G++VDG D AV A AVA RA GP IE +TYR HS S DP Y+ E+ Sbjct: 132 GVRVDGNDAEAVYAATSSAVARARAGAGPSFIEAVTYRVGPHSSSDDPTLYQDAREVEAW 191 Query: 305 RSNHDPIEQVRKRLL 319 R+ DP+E++R RL+ Sbjct: 192 RAK-DPLERLRARLI 205 >gi|325919447|ref|ZP_08181472.1| pyruvate dehydrogenase E1 component, alpha subunit [Xanthomonas gardneri ATCC 19865] gi|325550067|gb|EGD20896.1| pyruvate dehydrogenase E1 component, alpha subunit [Xanthomonas gardneri ATCC 19865] Length = 362 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 74/273 (27%), Positives = 129/273 (47%), Gaps = 11/273 (4%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 N +Q L+ ++ ML +R F+ K+ L G +G + +G EA VG+ S+ GD Sbjct: 32 NSQQLLALFKRMLFVRTFDSKSVALQRTGKLGTYAA-SLGHEATHVGIGASMRRGDVFAP 90 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM-FSTKNGFYGGHGIVGAQVSL 166 +YRE+G + GV ++ G + G + + F + Q Sbjct: 91 SYREYGTMFERGVRPRDVLLYWGGDERGSDYPRDADAAIDFPICV-------PISTQCLH 143 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A + K + ++ V C GDG +++ Y + N A + L +I + NN +A+ Sbjct: 144 AAGSALSFKLQGKPQVAVACCGDGGSSKTDFYAALNSAGAYKLPLILCVINNGWAISVPR 203 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S + +++G++ + +QVDG D+ AV M +A A G +IE LTYR Sbjct: 204 SAQTGAQTLAQKGLAGGLHCLQVDGNDLVAVLEAMRQARVRALAGDGGTVIEFLTYRLSD 263 Query: 287 HSMSDPA-NYRTREEINEMRSNHDPIEQVRKRL 318 H+ +D A YR EE+ + + +P+ ++R+ L Sbjct: 264 HTTADDARRYRGEEEVKQGWA-REPLLRLRRYL 295 >gi|54302773|ref|YP_132766.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Photobacterium profundum SS9] gi|46916197|emb|CAG22966.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Photobacterium profundum SS9] Length = 385 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 83/313 (26%), Positives = 145/313 (46%), Gaps = 30/313 (9%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y M+L R ++ KA L G +G + HL G EA+ + + +L D I YR+ Sbjct: 35 YCDMVLTRTYDNKAVALQRTGKLGTYPSHL--GAEAIGIAIGRALRADDVFIPYYRDMPA 92 Query: 115 ILACGVDASKIMAELTGRQGG----ISKGKGGSMHMFSTKNGFYGGHGI----------- 159 + A G+ K + G + G ++ + + H Sbjct: 93 MWARGIAMEKNLQYWGGDERGSDFCVTNDQTSTNFTTPNNTTQSPAHSPNHSHCRDLPFC 152 Query: 160 --VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + Q + G+A A K K +V GDGA ++G ES N A WN+ +++V+ N Sbjct: 153 VPIATQCTHAVGVASALKIEGGHKAALVTCGDGATSKGDFLESINCAGTWNIPLVFVVNN 212 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI----RAVKATMDKAVAYCRAHKG 273 NQ+A+ S++ IPG+ VDG DI AV+ ++D+A R KG Sbjct: 213 NQWAISVPRRLQCGADFLSEKAKGAGIPGLTVDGNDIVAMFDAVQISLDRA----RKGKG 268 Query: 274 PIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +IE ++YR H+ +D A+ YR+ +E++E +PI +++ L+ SE D K+ Sbjct: 269 ATLIEAISYRLGDHTTADDASRYRSEDELHEAWG-FEPISRLKTYLMRQSLWSEQDDKQW 327 Query: 333 EMNVRKIINNSVE 345 + + ++++ +V+ Sbjct: 328 QEHCQEVVEQAVK 340 >gi|256395302|ref|YP_003116866.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Catenulispora acidiphila DSM 44928] gi|256361528|gb|ACU75025.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Catenulispora acidiphila DSM 44928] Length = 383 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 134/277 (48%), Gaps = 12/277 (4%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 +V E + ++ L+ +R M++ RRF+ +A + G + + GQEA +G ++L Sbjct: 43 DVPELDPKELLATWRAMVIGRRFDVQATTMVRQGRLAVYPS-SFGQEACEIGAILALRPT 101 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D YR+ ++ G+D + + L G G ++ T + Sbjct: 102 DWFFPTYRDCVSMVTRGIDPVQTLTLLRG-----DWHCGYDSQVWRTAPQCTP----LAT 152 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q G+A A K D + + GDG ++G +E+ N AA++ I+ ++NNQYA+ Sbjct: 153 QAPHAAGLALAAKLAGDDTVALAFCGDGGTSEGDFHEALNFAAVYQAPAIFFVQNNQYAI 212 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 +++ + + + V + + G++VDG D+ AV+ + +A R +GP +IE +TY Sbjct: 213 SVPLAKQTHAAALAHKAVGYGMAGVRVDGNDVIAVRRVVAEAAERARRGQGPTLIEAVTY 272 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 R + H+ +D A YR E+ E DP+ ++ L Sbjct: 273 RMQAHTNADDATRYRDESEV-EYWKVRDPLARLETYL 308 >gi|325116266|emb|CBZ51819.1| hypothetical protein NCLIV_016110 [Neospora caninum Liverpool] Length = 377 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 89/330 (26%), Positives = 148/330 (44%), Gaps = 22/330 (6%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG++ N E+ L AY+ M+ + ++ + G + + G+EA+ + ++L Sbjct: 24 EGWQCPMSN-EEVLEAYQFMVKLSIWDNMFYSVQRQGRISFYIQ-NQGEEALQTAVGLAL 81 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 + D + YRE G +L G A + +L R+G SKG+ + + Sbjct: 82 DKKDHLFCQYRELGVLLLHGFTAEDALEQLFARRGDESKGRQMPISYSKHNVNLHTICTP 141 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + QV +G +A K D+I V FG+GAA++G + + N AA ++V NN Sbjct: 142 LTTQVPHASGAGYAFKLGGEDRIAVAFFGEGAASEGDFHAAMNFAATLKSQTLFVCRNNG 201 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ T V A + RG+S+ + ++VDG D+ A KA P++IE Sbjct: 202 YAISTPVKDQYAGDGIAIRGISYGMRTIRVDGNDLFASFLATKKAREIIVTQHEPVLIEF 261 Query: 280 LTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLH-NKWASEGD--------- 328 +TYR HS SD + YR E+ + ++R+ L + N W+ + D Sbjct: 262 MTYRVGHHSTSDDSFQYRPSGELEAWGQS----ARLRRYLDNLNLWSDKQDEELRKEARS 317 Query: 329 -----LKEIEMNVRKIINNSVEFAQSDKEP 353 +K +E N R + V DKEP Sbjct: 318 TMLRMMKAVEKNKRCAVIGGVFDDVYDKEP 347 >gi|311105811|ref|YP_003978664.1| 2-oxoisovalerate dehydrogenase subunit alpha [Achromobacter xylosoxidans A8] gi|310760500|gb|ADP15949.1| 2-oxoisovalerate dehydrogenase subunit alpha [Achromobacter xylosoxidans A8] Length = 410 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 81/289 (28%), Positives = 128/289 (44%), Gaps = 5/289 (1%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G E + EQ + R ML R F+ + + F +G+EA+ M+L Sbjct: 66 GPWAPELSHEQLRAGMRNMLKTRLFDARMLTAQRKKKIS-FYMQSLGEEAIGTAHAMALE 124 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 +GD YR+ +LA V +M +L + KG+ + + GF+ G + Sbjct: 125 QGDMCFPTYRQQSILLARDVSLVTMMCQLMSNERDPLKGRQLPVMYSDRERGFFSISGNL 184 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q G A+ + +I GDGA + + + A ++ VI + NNQ+ Sbjct: 185 ATQFIQAVGWGMASAIKGDTRIASGWIGDGATAEADFHTALTFAHVYRAPVILNVVNNQW 244 Query: 221 AMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 A+ T + A + F+ RGV I ++VDG D AV + A R + GP +IE Sbjct: 245 AISTFQAIAGGEGATFAGRGVGCGIASLRVDGNDFLAVYSASSWAAERARRNLGPTLIEW 304 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL-LHNKWASE 326 +TYR HS S DP+ YR ++ + DPI + +K L L W+ E Sbjct: 305 VTYRAGPHSTSDDPSKYRPGDDWSHFPLG-DPIARFKKHLILLGIWSDE 352 >gi|167567002|ref|ZP_02359918.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia oklahomensis EO147] Length = 410 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 76/266 (28%), Positives = 126/266 (47%), Gaps = 6/266 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R ML R F+ + Q+ F C+G+EA+ V ++L GD YR+ G ++ Sbjct: 82 RAMLKTRIFDARM-QIAQRQKKISFYMQCLGEEAIAVAHTLALERGDMCFPTYRQQGILM 140 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANK 175 +M +L + KG+ + M+ST+ GF+ G + Q G A A+ Sbjct: 141 VRDYPLVDMMCQLMSNERDPLKGRQLPV-MYSTREAGFFSISGNLATQFIQAVGWAMASA 199 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TN 234 + +I GDGA + + + A ++ VI + NNQ+A+ T + A + Sbjct: 200 IKGDTRIASAWIGDGATAEADFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGAT 259 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 F+ RGV I ++VDG D AV A A R + GP +IE +TYR HS S DP+ Sbjct: 260 FAGRGVGCGIASLRVDGNDFLAVYAASRWAAERARRNLGPTLIEWVTYRGGPHSTSDDPS 319 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLL 319 YR ++ DP++++++ ++ Sbjct: 320 KYRPGDDWTCFPLG-DPLDRLKRHMI 344 >gi|167829832|ref|ZP_02461303.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia pseudomallei 9] gi|226199262|ref|ZP_03794822.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei Pakistan 9] gi|225928669|gb|EEH24696.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Burkholderia pseudomallei Pakistan 9] Length = 410 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 6/266 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R ML R F+ + Q+ F C+G+EA+ V ++L GD YR+ G ++ Sbjct: 82 RAMLKTRIFDARM-QIAQRQKKISFYMQCLGEEAIAVAHTLALERGDMCFPTYRQQGILM 140 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANK 175 +M +L + KG+ + M+ST++ GF+ G + Q G A A+ Sbjct: 141 VREYPLVDMMCQLMSNERDPLKGRQLPV-MYSTRDAGFFSISGNLATQFIQAVGWAMASA 199 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TN 234 + +I GDGA + + + A ++ VI + NNQ+A+ T + A + Sbjct: 200 IKGDTRIASAWIGDGATAEADFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGAT 259 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPA 293 F+ RGV I ++VDG D AV A A R + GP +IE +TYR HS S DP Sbjct: 260 FAGRGVGCGIASLRVDGNDFLAVYAASRWAAERARRNLGPTLIEWVTYRAGPHSTSDDPT 319 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLL 319 YR ++ DP+ ++++ ++ Sbjct: 320 KYRPGDDWTNFPLG-DPLGRLKRHMI 344 >gi|221060905|ref|XP_002262022.1| branched-chain alpha keto-acid dehydrogenase [Plasmodium knowlesi strain H] gi|193811172|emb|CAQ41900.1| branched-chain alpha keto-acid dehydrogenase,putative [Plasmodium knowlesi strain H] Length = 431 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 78/296 (26%), Positives = 139/296 (46%), Gaps = 20/296 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI--GQEAVIVGMKMSLTE 101 + F+ E+ ++ Y+ M+ ++E YG+ G + G+E + G+ LT Sbjct: 78 TAPFSDEEIVNLYKQMVEFSIWDE---IFYGIQRQGRISFYIVNDGEEGIQFGLGKVLTP 134 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM-FSTKNGFYGGHGI- 159 D + YRE G +L+ G D I+ +L G + +GKG M + +++KN H I Sbjct: 135 EDHLYCQYRETGILLSRGFDYPDIINQLFGNK--YDEGKGRQMCICYTSKN--LNIHTIT 190 Query: 160 --VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + +Q+S G +A K + + GDG++++G Y + N AA+ +++ +N Sbjct: 191 TPLASQLSHAAGCGYALKLKNQKAVAATFCGDGSSSEGDFYAALNFAAVRESQTMFICKN 250 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N YA+ TS+ + R ++ I ++VDG D+ A K C P+ + Sbjct: 251 NLYAISTSIKDQYRGDGVAPRALALGIESVRVDGNDLFATYLAAKKMREICTEQSKPVFM 310 Query: 278 EMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLH----NKWASEGD 328 E + YRY HS SD + YR +EE + + D + + + L+ N + E D Sbjct: 311 EFMAYRYGHHSTSDDSTLYRPKEENDAWKK--DGVHPISRLFLYLKNKNLYTDEDD 364 >gi|299138470|ref|ZP_07031649.1| dehydrogenase E1 component [Acidobacterium sp. MP5ACTX8] gi|298599716|gb|EFI55875.1| dehydrogenase E1 component [Acidobacterium sp. MP5ACTX8] Length = 723 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 91/331 (27%), Positives = 144/331 (43%), Gaps = 28/331 (8%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAY 109 Q + YRLM L RR +++ L + F C G EA++V +++ G D Y Sbjct: 23 QLIEFYRLMYLSRRTDDREILLKRQQKIF-FQISCAGHEALLVAAGLAMKPGYDWFFPYY 81 Query: 110 REHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 R+ LA G + + G S G+ H S + Q Sbjct: 82 RDRALCLALGNTVEDQLLQAVGAADDPASGGRQMPSHWTSRQLNIVSPSSSTATQCLHAI 141 Query: 169 GIAFANKYR----------------------RSDKICVVCFGDGAANQGQVYESFNIAAL 206 G A A +Y +D++ V G+G+ +QG+ +ES N A+ Sbjct: 142 GCAEAGRYFTQHPEAAKKADGDYREFKDVKFHADEVVYVSIGEGSTSQGEFWESLNTASN 201 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAV 265 L V+YV+E+N YA+ T V + N S+ +F N +VDG D A M +AV Sbjct: 202 SKLPVLYVVEDNGYAISTPVEANTPGGNISRLISNFPNFHFAEVDGTDAVASYQAMVEAV 261 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 AYCR+ KGP ++ R HS+SD YR+ EE+ + + DPI +++ LL Sbjct: 262 AYCRSGKGPALVHGHVVRPYSHSLSDDERQYRSEEEL-QADALRDPISRMQMWLLREGIL 320 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 + E+E V + + ++ + A + P P Sbjct: 321 DAQGINELERKVDEEVQHASDRALAAVLPQP 351 >gi|71894294|ref|YP_278402.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycoplasma synoviae 53] gi|71851082|gb|AAZ43691.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycoplasma synoviae 53] Length = 374 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 84/309 (27%), Positives = 152/309 (49%), Gaps = 20/309 (6%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQ 104 + +Q + Y+ M+L R+ + QL G + F +G+EA+ V +L + D Sbjct: 42 QLTDKQLVEGYKWMVLSRQQDTYMLQLQRQGRMLTFAP-NLGEEALQVATAFALDKKKDW 100 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + A+R + +LA GV M G + G +G ++ + ++G Q+ Sbjct: 101 FLPAFRSNATMLALGVPMVNQMLYWNGNERGSKIPEGVNVTPINI---------VIGTQI 151 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 S G+AFA K ++ + + G+G +G+ YE N A++ + ++ + NNQ+A+ T Sbjct: 152 SQAAGVAFALKQNKTGGVALCFIGNGGTAEGEFYEGMNFASVRSWPAVFCVNNNQWAIST 211 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + + + V+ +PG+ VDG D+ A + +AV + R P+++E +T+R Sbjct: 212 PNHLESISSTIAAKAVAAAVPGVVVDGNDLLASYDVIKEAVEFARKESRPVLVEFVTWRQ 271 Query: 285 RGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 H+ SD P YRT E + + +P+ ++ K LL K ++ KEIE KI +S Sbjct: 272 GPHTTSDNPRVYRTETE-EKKQEVWEPMHRIEKYLLDRKLLTK---KEIE----KIWADS 323 Query: 344 VEFAQSDKE 352 +E A+ E Sbjct: 324 LEVAKKTYE 332 >gi|319440879|ref|ZP_07990035.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Corynebacterium variabile DSM 44702] Length = 376 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 81/284 (28%), Positives = 132/284 (46%), Gaps = 15/284 (5%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F +Q + +ML R E+ G +G F +GQEA +G + D + Sbjct: 46 FTDDQLVHFMEIMLRERILHEQTTVFSKQGRLG-FYAPTLGQEASQLGSVTAFQPQDYLF 104 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGI-SKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +YR+ ++ G +T QG + S+G M ++ I+GAQ Sbjct: 105 PSYRDLPQMIEHGA--------ITPAQGFLWSRGHVQGNRMADGHRSWFP-QIIIGAQHI 155 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A K D + GDG+ +QG YE N A + ++ +I+NN +A+ Sbjct: 156 AAAGAALGLKKNGEDAVAFSYSGDGSTSQGDTYEGLNFAGAFQAPLVMIIQNNGWAISVP 215 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + +++ V+ +P +QVDGMDI AV A A + A GP++IE LTYR+ Sbjct: 216 RDYQTHTRTLAQKAVAAGVPSVQVDGMDILAVHAVAKAARDFAAAGNGPVMIETLTYRFG 275 Query: 286 GHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASE 326 HS + DP+ YRT E+ + + DP+ ++R+ L W++E Sbjct: 276 AHSSAGDDPSRYRTHEQ-EQPWFDKDPLNRLRELLTEKDLWSAE 318 >gi|293604895|ref|ZP_06687292.1| 2-oxoisovalerate dehydrogenase [Achromobacter piechaudii ATCC 43553] gi|292816723|gb|EFF75807.1| 2-oxoisovalerate dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 410 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 3/241 (1%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ ++L +GD YR+ +L+ V +M +L + KG+ Sbjct: 105 FYMQSLGEEAIGSAHALALEQGDMCFPTYRQQSLLLSRDVSLVTMMCQLMSNERDPLKGR 164 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 + +NGF+ G + Q G A A+ + +I GDGA + + + Sbjct: 165 QLPVMYSDRENGFFTISGNLATQFIQAVGWAMASAIKGDTRIASAWIGDGATAEADFHTA 224 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKA 259 A ++ VI + NNQ+A+ T + A + F+ RGV I ++VDG D AV + Sbjct: 225 LTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGATFAGRGVGCGIASLRVDGNDFLAVYS 284 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 A R + GP +IE +TYR HS S DP+ YR ++ DPIE+ +K L Sbjct: 285 ASRWAAERARRNLGPTLIEWVTYRAGPHSTSDDPSKYRPGDDWAHFPLG-DPIERFKKHL 343 Query: 319 L 319 + Sbjct: 344 I 344 >gi|194367518|ref|YP_002030128.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Stenotrophomonas maltophilia R551-3] gi|194350322|gb|ACF53445.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Stenotrophomonas maltophilia R551-3] Length = 360 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 14/274 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 ++ ML +R F+ K+ L G +G + C+G EA VG+ ++ + D +YRE+G + Sbjct: 40 FKQMLFVRTFDSKSIALQRTGKLGTYAA-CLGHEAAHVGIGAAMQKDDVFAPSYREYGAM 98 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHM-FSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 GV ++ G + G G + F + Q G A Sbjct: 99 FMRGVRPHDVLMYWGGDERGNDYGGNAAKDFPFCVP---------ISTQCLHAAGAALKF 149 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + +I V GDG +++ Y + N A + L +I I NN +A+ S + Sbjct: 150 KLNKEPQIAVAVCGDGGSSKTDFYAALNSAGAYKLPLILCIVNNGWAISVPRSAQTGAET 209 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA- 293 +++G++ + +QVDG D+ AV A M++A A G ++E++TYR H+ +D A Sbjct: 210 LAQKGLAGGLHCLQVDGNDLIAVLAAMEQARERALAGDGGTVLELMTYRLSDHTTADDAR 269 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLH-NKWASE 326 YR E+ + +P+ ++RK L++ W+ E Sbjct: 270 RYRDDAEVKDA-WQREPMLRLRKYLINAGVWSEE 302 >gi|114569255|ref|YP_755935.1| branched-chain alpha-keto acid dehydrogenase E1 component [Maricaulis maris MCS10] gi|114339717|gb|ABI64997.1| branched-chain alpha-keto acid dehydrogenase E1 component [Maricaulis maris MCS10] Length = 409 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/265 (28%), Positives = 129/265 (48%), Gaps = 4/265 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+L R ++++ +L G + F G+EAV V M+++ D + +YR+ G + Sbjct: 81 RHMVLTRVYDDRMLKLQRQGKMS-FYMKSTGEEAVAVAGAMAMSNDDMVFPSYRQQGILF 139 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 A G D +M KG+ +H + F+ G + Q+ G A A +Y Sbjct: 140 ARGRDIVDMMCHCISNSRDNLKGRQLPVHYTWAEGKFFSISGNLATQLPQAVGYAMACEY 199 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNF 235 R +I GDG+ +G + + +A+ + VI + NNQ+A+ T A+ + F Sbjct: 200 RGDGEIAATWIGDGSTAEGDFHGALVLASTYRAPVIVNVVNNQWAISTFQGIAAGEAPTF 259 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + +G+ + + +++DG D AV A A R G +IE TYR HS S DP+ Sbjct: 260 AYKGMGYGLASLRIDGNDFLAVYAATQWAAKRARDGHGATVIEHFTYRADAHSTSDDPSG 319 Query: 295 YRTREEINEMRSNHDPIEQVRKRLL 319 YR + E N + DPIE++++ L+ Sbjct: 320 YRPKGE-NAIWPLGDPIERLKQHLI 343 >gi|112943266|gb|ABI26302.1| pyruvate dehydrogenase complex E1 component alpha subunit [Lactobacillus reuteri] Length = 368 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 17/291 (5%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ F+ E + + M+ R E+ G +G F G+EA +G + + D Sbjct: 39 MANFSDELLVDLMKKMVWARALHEQTMSFSKQGRLG-FYAPTWGEEASEMGTAAAFKKQD 97 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + AYR+ ++ G +++ G G ++F + I+GAQ Sbjct: 98 FLFPAYRDLPQLIQHGATVAQMYLWSKGHIKG---------NLFDARA--LRPQIIIGAQ 146 Query: 164 -VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V + G K D + G+G ++QG YE N A + + +++I+NN +A+ Sbjct: 147 MVEMAGGALGIKKNGEKDTVAYAYTGEGGSSQGDTYEGMNFAGAFQVPGVFIIQNNGWAI 206 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +++ V+ IPG+QVDGMD+ A +A + GP++IE LTY Sbjct: 207 WFPRKLQTETQTIAQKAVAAGIPGVQVDGMDVLACYEGAKEAREFAGGGDGPVLIETLTY 266 Query: 283 RYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLK 330 R+ HS + DP YRT +E + DP+ ++RK L W+ E + K Sbjct: 267 RFGAHSSAGDDPTRYRTEDETKPW-FDKDPLIRLRKYLTKKGLWSEEEEQK 316 >gi|224010886|ref|XP_002294400.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220969895|gb|EED88234.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 337 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 7/285 (2%) Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C G+E + +G +L+ D + YRE G ++ G + + Q + KG+ + Sbjct: 26 CHGEEGMHIGSASALSPQDVVFAQYREQGILMWRGFTLEQFCNQCFSNQLDLGKGRQMPV 85 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY------RRSDKICVVCFGDGAANQGQVY 198 H + +G Q++ G A+ K R + + FGDGAA+ + Sbjct: 86 HYGCRALNYQTISSPLGTQLTQAVGAAYKLKLDAIANPERESAVSIAYFGDGAASSVDFH 145 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 + N AA + +I+ NN YA+ T VS + R + + G++VDG D+ AV Sbjct: 146 SACNFAATLRVPMIFFCRNNGYAISTPVSDQYSGDGIVSRAPGYGMNGIRVDGNDVFAVH 205 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKR 317 + + A P++IE +TYR HS SD + YR +E+ DP+ + Sbjct: 206 SVVQSARKLALETSSPVMIEAMTYRQGHHSTSDDSTRYRDSDEVQTATDVSDPLVRFDLF 265 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 L W + + IE R + ++E A++ +P ++ D+ Sbjct: 266 LRQFGWTDDNVVATIEDEERIAVLRAIEGAEALPDPKLEHMFEDV 310 >gi|159484068|ref|XP_001700082.1| mitochondrial pyruvate dehydrogenase complex, E1 component, alpha subunit [Chlamydomonas reinhardtii] gi|158272578|gb|EDO98376.1| mitochondrial pyruvate dehydrogenase complex, E1 component, alpha subunit [Chlamydomonas reinhardtii] Length = 497 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/106 (53%), Positives = 75/106 (70%), Gaps = 3/106 (2%) Query: 249 VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSN 307 VDGMD+ AVK + A AY A+ GPI++EM TYRY GHSMSDP + YRTR+EIN MR+ Sbjct: 357 VDGMDVLAVKNAVAFAKAYALAN-GPIVMEMDTYRYHGHSMSDPGSTYRTRDEINAMRTE 415 Query: 308 HDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 DPIE+V KRLL N DLK+I+ V+K ++++VE A+ + P Sbjct: 416 RDPIERV-KRLLLNNGVDPADLKKIDKEVKKEVDDAVEQAKQGQIP 460 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 19/111 (17%) Query: 23 AKRAATSSVDCVDIPF----LEGFE-VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 A AA+ S+ +P+ +E V E N E+ + Y+LM +RR E A +Y Sbjct: 284 ASAAASPSIKVEVMPYKVHRIEAPSNVVETNVEELTNFYKLMYKMRRMEIAADMMYKAKF 343 Query: 78 VGGFCHLCIGQEAV----IVGMK--------MSLTEGDQMIT--AYREHGH 114 + GFCHL GQEAV ++ +K +L G ++ YR HGH Sbjct: 344 IRGFCHLYDGQEAVDGMDVLAVKNAVAFAKAYALANGPIVMEMDTYRYHGH 394 >gi|330444340|ref|YP_004377326.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and subunit beta [Chlamydophila pecorum E58] gi|328807450|gb|AEB41623.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Chlamydophila pecorum E58] Length = 650 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 6/279 (2%) Query: 79 GGFCHLCIGQE-AVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG-I 136 G F C G E A IV K L E D YR+ G L G D ++I+A R Sbjct: 12 GTFQLSCAGHELAGIVAGKSLLPEKDWSFPYYRDQGFPLGLGGDLAEIVAAFLARTSSNH 71 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 S G+ H K +VG Q G A+A K+ ++D++ V GDGA +QG+ Sbjct: 72 SSGRMMPYHYSHKKLRICCQSSVVGTQFLQAAGRAWAVKHAQTDEVVYVSGGDGATSQGE 131 Query: 197 VYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN-IPGMQVDGMDIR 255 +E N AL L ++ VI+NNQ+A+ SA +F + G S+ + +VDG D Sbjct: 132 FHEMLNYVALHQLPLVTVIQNNQWAISVPWKEQSAM-DFVQLGRSYQGLAVHEVDGSDYM 190 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQV 314 A+ T AV R + P ++ + R + HS SD YR+ ++ E DP++++ Sbjct: 191 ALLETFSTAVKQARENATPALVLVDVVRLQPHSNSDDHTKYRSPLDL-EQSYVRDPLKRL 249 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + ++ S +L+EI + + + + A++ P Sbjct: 250 ERDVVELYGGSSEELREIYAQAEEEVARAFQIAEAKPFP 288 >gi|62184951|ref|YP_219736.1| putative oxidoreductase [Chlamydophila abortus S26/3] gi|62148018|emb|CAH63769.1| putative oxidoreductase [Chlamydophila abortus S26/3] Length = 678 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 87/312 (27%), Positives = 140/312 (44%), Gaps = 7/312 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHL-CIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 +L+ +R E K L GG L C G E V V SL G D YR+ G Sbjct: 17 KLVWSLRFAENKMLLLSRQSDSGGTFQLSCAGHELVGVVAGKSLLRGKDWSFPYYRDQGF 76 Query: 115 ILACGVDASKIMAELTGRQG-GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 + G D S+I A GR S G+ H K +VG+Q G A+A Sbjct: 77 PVGLGCDLSEIFASFLGRLAPNHSSGRMMPYHYSHKKLRICCQSSVVGSQFLQAAGRAWA 136 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K+ +S+++ V GDG+ +QG+ +E N AL L ++ V++NN +A+ + T Sbjct: 137 VKHTKSNEVVYVSGGDGSTSQGEFHEMLNYVALHKLPLVTVVQNNAWAISVPF-KDQCST 195 Query: 234 NFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 + + G S+ + +VDG D + T KAV R P +I + R HS SD Sbjct: 196 DLVRLGESYQGLSVYEVDGGDYFKLVDTFSKAVDQARHTSVPALILVDVMRLEPHSNSDN 255 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 YR+RE+++ +S HDP+ ++ + ++ S ++ +I+ + + E A+ Sbjct: 256 HEKYRSREDLDHCKS-HDPLIRLERLMIDECGISPAEILDIKAEAEAEVTRACEIAEGMP 314 Query: 352 EPDPAELYSDIL 363 P D+ Sbjct: 315 FPSKGSTSHDVF 326 >gi|323341611|ref|ZP_08081844.1| pyruvate dehydrogenase complex E1 component alpha subunit [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464036|gb|EFY09229.1| pyruvate dehydrogenase complex E1 component alpha subunit [Erysipelothrix rhusiopathiae ATCC 19414] Length = 376 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 90/325 (27%), Positives = 142/325 (43%), Gaps = 23/325 (7%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + E+ + + ML R +++ L G +G F GQEA + + +GD Sbjct: 45 LPDLKDEELVELFETMLWSRALNDRSTTLARQGRLGFFAPTA-GQEASQMASHFAFNKGD 103 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YR+ ++ G+ K G G + + I+GAQ Sbjct: 104 ILFPGYRDIPQLVKHGLPLHKAFLWSRGHVEG---------NNYPEDFNAMPPQIIIGAQ 154 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G A K R ++ GDG ++QG YE N A + V++ I+NN YA+ Sbjct: 155 IIQAAGAGIALKKRGKAQVAFTYTGDGGSSQGDTYEGLNYAGAFKAPVVFFIQNNGYAIS 214 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T +A +++ + IPG+QVDGMD AV A + GP++IE LT R Sbjct: 215 TPRHVQTAAPTLAQKAAAAGIPGVQVDGMDPLAVYVATKAARDWAIEGNGPVLIETLTSR 274 Query: 284 YRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEM--NVRK 338 + HS+S DP YRT+ +E DP+ ++R L W E KE+E+ + Sbjct: 275 FGPHSLSGDDPKRYRTQASFDEW-DKKDPLIRMRNFLTEKGLWDEE---KEVELIAQIDD 330 Query: 339 IINNSVEFAQSDKEPDPAELYSDIL 363 I +V+ A S P + SD L Sbjct: 331 EIKEAVKLADS----QPKQKVSDFL 351 >gi|15605063|ref|NP_219847.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis D/UW-3/CX] gi|255311145|ref|ZP_05353715.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis 6276] gi|255317446|ref|ZP_05358692.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis 6276s] gi|255506922|ref|ZP_05382561.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis D(s)2923] gi|3328760|gb|AAC67935.1| (pyruvate) Oxoisovalerate Dehydrogenase Alpha/Beta Fusion [Chlamydia trachomatis D/UW-3/CX] gi|289525381|emb|CBJ14858.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis Sweden2] gi|296434933|gb|ADH17111.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis E/150] gi|296435859|gb|ADH18033.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis G/9768] gi|296436785|gb|ADH18955.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis G/11222] gi|296437719|gb|ADH19880.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis G/11074] gi|296438653|gb|ADH20806.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis E/11023] gi|297140218|gb|ADH96976.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis G/9301] gi|297748470|gb|ADI51016.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis D-EC] gi|297749350|gb|ADI52028.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis D-LC] Length = 678 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 85/303 (28%), Positives = 139/303 (45%), Gaps = 7/303 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHL-CIGQEAVIVGMKMSLTEG-DQMITAYREHG 113 +RL +R E K L GG L C G E V SL G D YR+ G Sbjct: 16 FRLAWTLRFSERKMLLLSRQSGSGGSFQLSCAGHELAGVVAAKSLIPGKDWAFPYYRDQG 75 Query: 114 HILACGVDASKIMAELTGRQG-GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L G D S+I A R S G+ H K +VG Q G A+ Sbjct: 76 FPLGLGCDLSEIFASFLARTTQNHSAGRMMPYHYSHKKLRICCQSSVVGTQFLQAAGRAW 135 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 K ++ V GDG+ +QG+ +E N A+L L ++ I+NNQ+A+ + Sbjct: 136 GVKNSGKSEVVYVSGGDGSTSQGEFHEMLNFASLHQLPLVIAIQNNQWAISVPFADQCG- 194 Query: 233 TNFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + G S++ + +VDG D+ A+ T ++AV+ R P ++ + R HS SD Sbjct: 195 ADLVALGNSYSGLATYEVDGGDVSALTQTFERAVSDARHRHIPALVIVNVVRLESHSNSD 254 Query: 292 -PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 A YR+ E+++ ++ DP+ ++ K LL + + +++I+ +++ +N + E A+S Sbjct: 255 NQAKYRSEEDLSCCQA-QDPLVRLEKSLLDDFGVAHEVIEQIKAELQETVNQACELAESA 313 Query: 351 KEP 353 P Sbjct: 314 PFP 316 >gi|76789066|ref|YP_328152.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis A/HAR-13] gi|76167596|gb|AAX50604.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis A/HAR-13] Length = 678 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 85/303 (28%), Positives = 139/303 (45%), Gaps = 7/303 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHL-CIGQEAVIVGMKMSLTEG-DQMITAYREHG 113 +RL +R E K L GG L C G E V SL G D YR+ G Sbjct: 16 FRLAWTLRFSERKMLLLSRQSGSGGSFQLSCAGHELAGVVAAKSLIPGKDWAFPYYRDQG 75 Query: 114 HILACGVDASKIMAELTGRQG-GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L G D S+I A R S G+ H K +VG Q G A+ Sbjct: 76 FPLGLGCDLSEIFASFLARTTQNHSAGRMMPYHYSHKKLRICCQSSVVGTQFLQAAGRAW 135 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 K ++ V GDG+ +QG+ +E N A+L L ++ I+NNQ+A+ + Sbjct: 136 GVKNSGKSEVVYVSGGDGSTSQGEFHEMLNFASLHQLPLVIAIQNNQWAISVPFADQCG- 194 Query: 233 TNFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + G S++ + +VDG D+ A+ T ++AV+ R P ++ + R HS SD Sbjct: 195 ADLVALGNSYSGLATYEVDGGDVSALTQTFERAVSDVRHRHIPALVIVNVVRLESHSNSD 254 Query: 292 -PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 A YR+ E+++ ++ DP+ ++ K LL + + +++I+ +++ +N + E A+S Sbjct: 255 NQAKYRSEEDLSCCQA-QDPLVRLEKSLLDDFGVAHEVIEQIKAELQETVNQACELAESA 313 Query: 351 KEP 353 P Sbjct: 314 PFP 316 >gi|297620705|ref|YP_003708842.1| Pyruvate dehydrogenase, E1 component alpha subunit [Waddlia chondrophila WSU 86-1044] gi|297376005|gb|ADI37835.1| Pyruvate dehydrogenase, E1 component alpha subunit [Waddlia chondrophila WSU 86-1044] Length = 407 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 75/271 (27%), Positives = 120/271 (44%), Gaps = 3/271 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR+M L R +E+ L G++ F G+E V +L D M YRE Sbjct: 76 LKGYRIMCLTRHNDERMITLQRQGVIS-FAMSSKGEECCAVASAAALKASDWMYPQYREA 134 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G + G+ + + I G+ H S + +G ++ G A+ Sbjct: 135 GIVFWRGMSVEDYVNHMFCNAKDIILGRQMPNHFGSRELNIVTVSSPIGTKIPHAAGSAY 194 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A + ++ + + FG+GA+++G + AA+ VI+ NN YA+ T S+ Sbjct: 195 AMRVKKEKNVAICYFGEGASSEGDFHVGLTFAAVRKAPVIFFCRNNGYAISTPTSKQFGS 254 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-D 291 + G+ I +VDG D AV T+ A C KGP++IE +TYR HS S D Sbjct: 255 EGVAPEGIGHGITTYRVDGNDFFAVYETVLNARKECIQGKGPVLIEAMTYRMGAHSTSDD 314 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 P+ YR +E + PI ++++ L K Sbjct: 315 PSRYRDDKECRKW-EKRCPILRLKRYLEKKK 344 >gi|332186486|ref|ZP_08388230.1| dehydrogenase E1 component family protein [Sphingomonas sp. S17] gi|332013469|gb|EGI55530.1| dehydrogenase E1 component family protein [Sphingomonas sp. S17] Length = 416 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 4/265 (1%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+L+R F+E+ + G F +G+EAV V +L D +YR+ G ++ Sbjct: 76 RHMVLLRAFDERMFRAQRQGKTS-FYMKALGEEAVAVAAAHALDYEDMCFPSYRQQGLLI 134 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 A +M ++ GK + + + GF+ G + Q G A A+ Sbjct: 135 ARDWPLVDMMNQIYSNSADRLGGKQLPIMYSAKEAGFFSISGNLTTQYPQAVGWAMASAA 194 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNF 235 + +I V G+G+ +G + + AA++ V+ + NNQ+A+ + A A+ T F Sbjct: 195 KGDTRIAAVWCGEGSTAEGDFHSACTFAAVYRAPVVMNVVNNQWAISSFSGFAGAEATTF 254 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPAN 294 + R + + I G++VDG D AV A A R ++G +IE TYR GHS S DP Sbjct: 255 AARAIGYGIAGLRVDGNDALAVYAATQWAAERARTNQGATLIEHFTYRTEGHSTSDDPTQ 314 Query: 295 YRTREEINEMRSNHDPIEQVRKRLL 319 YR+ E DPI +++ L+ Sbjct: 315 YRSAGEPTAWPLG-DPIRRLKDHLI 338 >gi|330819430|ref|YP_004348292.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia gladioli BSR3] gi|327371425|gb|AEA62780.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia gladioli BSR3] Length = 565 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 135/302 (44%), Gaps = 8/302 (2%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G E ++++ + R ML R F+ + + + +G+EA+ +L Sbjct: 222 GPWAPELDRDRLRAGMRAMLKTRVFDARMLIAQRQKKISFYVQ-SLGEEAIGTAHSFALD 280 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 GD YR+ +L V +M +L + KG+ + + GF+ G + Sbjct: 281 NGDMCFPTYRQQSILLTREVPLVDLMCQLMSNERDPLKGRQLPVMYSNRAAGFFTISGNL 340 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 Q G A A+ + +I GDGA + + + A ++ VI + NNQ+ Sbjct: 341 ATQFIQAVGWAMASAIKGDTRIASAWIGDGATAEADFHTALTFAHVYRAPVILNVVNNQW 400 Query: 221 AMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 A+ T + A + + F+ RGV I ++VDG D AV + A R + GP +IE Sbjct: 401 AISTFQAIAGGEGSTFAGRGVGCGIASLRVDGNDFLAVYSASRWAAERARRNLGPTLIEW 460 Query: 280 LTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHN-KWASE--GDLK-EIEM 334 +TYR HS S DP+ YR ++ DPIE+ ++ L+ W+ + DLK E+E Sbjct: 461 VTYRAGPHSTSDDPSKYRPGDDWAHFPLG-DPIERFKRHLIREGHWSEQEHADLKGELEA 519 Query: 335 NV 336 V Sbjct: 520 EV 521 >gi|237802765|ref|YP_002887959.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis B/Jali20/OT] gi|231273999|emb|CAX10792.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis B/Jali20/OT] Length = 678 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 85/303 (28%), Positives = 139/303 (45%), Gaps = 7/303 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHL-CIGQEAVIVGMKMSLTEG-DQMITAYREHG 113 +RL +R E K L GG L C G E V SL G D YR+ G Sbjct: 16 FRLAWTLRFSERKMLLLSRQSGSGGSFQLSCAGHELAGVVAAKSLIPGKDWAFPYYRDQG 75 Query: 114 HILACGVDASKIMAELTGRQG-GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L G D S+I A R S G+ H K +VG Q G A+ Sbjct: 76 FPLGLGCDLSEIFASFLARTTQNHSAGRMMPYHYSHKKLRICCQSSVVGTQFLQAAGRAW 135 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 K ++ V GDG+ +QG+ +E N A+L L ++ I+NNQ+A+ + Sbjct: 136 GVKNSGKSEVVYVSGGDGSTSQGEFHEMLNFASLHQLPLVIAIQNNQWAISVPFADQCG- 194 Query: 233 TNFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + G S++ + +VDG D+ A+ T ++AV+ R P ++ + R HS SD Sbjct: 195 ADLVALGNSYSGLATYEVDGGDVSALTQTFERAVSDVRHRHIPALVIVNVVRLESHSNSD 254 Query: 292 -PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 A YR+ E+++ ++ DP+ ++ K LL + + +++I+ +++ +N + E A+S Sbjct: 255 NQAKYRSEEDLSCCQA-QDPLVRLEKSLLDDFGVAHEVIEQIKAELQETVNQACELAESA 313 Query: 351 KEP 353 P Sbjct: 314 PFP 316 >gi|15829235|ref|NP_326595.1| pyruvate dehydrogenase E1 component, alpha subunit [Mycoplasma pulmonis UAB CTIP] gi|14090179|emb|CAC13937.1| PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT [Mycoplasma pulmonis] Length = 368 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 134/291 (46%), Gaps = 14/291 (4%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + + E+ + AY M+ R+ + QL G + F G+EA+ V +++ + D Sbjct: 37 TSLSNEKIIEAYTWMVRSRQQDTYMTQLQRQGRMLTFAP-NFGEEALQVATSLAMEKDDW 95 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + A+R + +L GV M G + G +G ++ + + Q Sbjct: 96 FLPAFRSNATMLHLGVPMINQMVYWNGNERGSKIPEGVNVLPVNVP---------IATQY 146 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 S G+A+ K + V G+G +G+ YE+ N++++ N V++ + NNQ+++ T Sbjct: 147 SHAAGVAYGMKLLGKKNVAVTIIGNGGTAEGEFYEAMNVSSIHNWPVVFTVNNNQWSIST 206 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + + + IPG++VDG D+ A M +AV + + GP+++E T+R Sbjct: 207 P-EHLETKATIAAKAHAVGIPGVRVDGNDLLASYEVMKEAVEWAKEGNGPVLVEFYTWRQ 265 Query: 285 RGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIE 333 H+ SD P YRT E E P+ +++ ++ W E D K E Sbjct: 266 GVHTSSDNPRIYRTEEMEKEKEKWE-PMHRIKNYMIEKGFWTEEQDQKLWE 315 >gi|86741473|ref|YP_481873.1| pyruvate dehydrogenase [Frankia sp. CcI3] gi|86568335|gb|ABD12144.1| pyruvate dehydrogenase [Frankia sp. CcI3] Length = 417 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 87/294 (29%), Positives = 132/294 (44%), Gaps = 35/294 (11%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + E + Y M+L RR +E+A L G + + L GQEA VG + D + Sbjct: 71 DHELRMEFYTSMVLARRLDEEATALQRQGELVLWIPLR-GQEAAQVGSAAAARPRDYLFP 129 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ---- 163 +YREH GV A +++ L G G H + N ++ AQ Sbjct: 130 SYREHAVAWHRGVPAVEVIRLLRG-----VSHDGWDTHRHNMANYTI----VLAAQTLHA 180 Query: 164 VSLGTGIAFANKYRRSDKI------------------CVVCFGDGAANQGQVYESFNIAA 205 V G G+ +V GDGA +QG E+F AA Sbjct: 181 VGFGMGVLLDGAAGTGTGTGGTGGTGTGGTDTDTDMAVMVYLGDGAMSQGDANEAFVWAA 240 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + V++ +NNQ+A+ T SR + ++R F PG++VDG D+ AV A A+ Sbjct: 241 SFGAPVVFFCQNNQWAISTP-SRRQSPVRLARRADGFGFPGLRVDGNDVLAVHAVTTWAL 299 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 R+ +GP++IE TYR H+ SD A Y+ +EI ++ DPIE++R+ L Sbjct: 300 DRARSGRGPVLIEANTYRMAPHTTSDDATRYQPPDEITAWQAR-DPIERLRRLL 352 >gi|322435297|ref|YP_004217509.1| Transketolase central region [Acidobacterium sp. MP5ACTX9] gi|321163024|gb|ADW68729.1| Transketolase central region [Acidobacterium sp. MP5ACTX9] Length = 725 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 86/299 (28%), Positives = 132/299 (44%), Gaps = 28/299 (9%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 + EQ + YRLM L RR +++ L + F C G EA++V M+L D Sbjct: 21 LSNEQLIEFYRLMYLSRRVDDREIVLKRQQKIF-FQISCAGHEALLVAAGMALKPSYDWF 79 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGG-ISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 YR+ LA G A + + + G S G+ H S+K Q Sbjct: 80 FPYYRDRAICLALGNTAEEQLLQAVGAAADPASGGRQMPSHWSSSKLNIVTPSSSTATQC 139 Query: 165 SLGTGIAFANKYR----------------------RSDKICVVCFGDGAANQGQVYESFN 202 G A A +Y D++ V G+G+ +QG+ +ES N Sbjct: 140 LHAIGCAEAGRYFSQHPESAAKVDGDYREFKNVKFHGDEVVYVSIGEGSTSQGEFWESLN 199 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATM 261 A+ L V+YV+E+N YA+ T V + N S+ +F N ++DG D A M Sbjct: 200 TASNGKLPVVYVVEDNGYAISTPVEANTPGGNISRLIANFPNFHFAEIDGTDPIACYNAM 259 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 +AVAYCRA GP ++ R HS+SD YR++ E+ + + DPI +++ L+ Sbjct: 260 TEAVAYCRAGHGPALVHGHVVRPYSHSLSDDERLYRSQAEL-QADALRDPISRMQVWLM 317 >gi|323488854|ref|ZP_08094094.1| pyruvate dehydrogenase E1 component, alpha subunit [Planococcus donghaensis MPA1U2] gi|323397552|gb|EGA90358.1| pyruvate dehydrogenase E1 component, alpha subunit [Planococcus donghaensis MPA1U2] Length = 370 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 13/262 (4%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + +LT+ D ++ YR+ ++ Sbjct: 55 MVYTRILDQRSISLNRQGRLG-FYAPTAGQEASQLASHFALTKEDFILPGYRDVPQLIWH 113 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G + S+G M N I+GAQ+ G+A + R+ Sbjct: 114 GWPLHQAFL--------FSRGHFMGNQMPEGLN-ILPPQIIIGAQIIQAAGVALGMQKRK 164 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + + V GDG ++QG YE N A + I++++NNQYA+ T ++ +++ Sbjct: 165 KESVAVTYTGDGGSSQGDFYEGLNFAGAFRAPAIFIVQNNQYAISTPRELQTSAKTIAQK 224 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 V+ IPG+ VDGMD AV A A GP +IE L YRY H+M+ DP YR Sbjct: 225 AVAAGIPGVLVDGMDPLAVYAVTRDARERAVKGDGPTLIETLCYRYGPHTMAGDDPTRYR 284 Query: 297 TREEINEMRSNHDPIEQVRKRL 318 T +I+ DP+ + RK L Sbjct: 285 T-SDIDSEWEKKDPLVRFRKYL 305 >gi|255348704|ref|ZP_05380711.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis 70] gi|255503244|ref|ZP_05381634.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis 70s] Length = 678 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 85/303 (28%), Positives = 139/303 (45%), Gaps = 7/303 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHL-CIGQEAVIVGMKMSLTEG-DQMITAYREHG 113 +RL +R E K L GG L C G E V SL G D YR+ G Sbjct: 16 FRLAWTLRFSERKMLLLSRQSGSGGSFQLSCAGHELAGVVAAKSLIPGKDWAFPYYRDQG 75 Query: 114 HILACGVDASKIMAELTGRQG-GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L G D S+I A R S G+ H K +VG Q G A+ Sbjct: 76 FPLGLGCDLSEIFASFLARTTQNHSAGRMMPYHYSHKKLRICCQSSVVGTQFLQAAGRAW 135 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 K ++ V GDG+ +QG+ +E N A+L L ++ I+NNQ+A+ + Sbjct: 136 GVKNSGKSEVVYVSGGDGSTSQGEFHEMLNFASLHQLPLVIAIQNNQWAISVPFADQCG- 194 Query: 233 TNFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + G S++ + +VDG D+ A+ T ++AV+ R P ++ + R HS SD Sbjct: 195 ADLVALGNSYSGLATYEVDGGDVSALTQTFERAVSDARHRHIPALVIVNVVRLESHSNSD 254 Query: 292 -PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 A YR+ E+++ ++ DP+ ++ K LL + + +++I+ +++ +N + E A+S Sbjct: 255 NQAKYRSEEDLSCCQA-QDPLVRLEKSLLDDFGVAYEVIEQIKAELQETVNQACELAESA 313 Query: 351 KEP 353 P Sbjct: 314 PFP 316 >gi|156060159|ref|XP_001596002.1| hypothetical protein SS1G_02218 [Sclerotinia sclerotiorum 1980] gi|154699626|gb|EDN99364.1| hypothetical protein SS1G_02218 [Sclerotinia sclerotiorum 1980 UF-70] Length = 388 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 8/233 (3%) Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR------SDKICVVCFGDGA 191 +G+ +H S + + + Q+ G A+A K +R ++ FG+GA Sbjct: 117 RGRNMPVHYGSKELNIHSISSPLATQIPHAAGAAYALKMQRLSNPSLPPRVVACYFGEGA 176 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 A++G + + NIAA + VI++ NN YA+ T + RG + I ++VDG Sbjct: 177 ASEGDFHGALNIAATRSCPVIFICRNNGYAISTPTLEQYRGDGIASRGTGYGIDTIRVDG 236 Query: 252 MDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHD 309 DI AV KA G P++IE ++YR HS SD + YR R E+ + + + Sbjct: 237 NDIWAVLQVTKKARELALKDGGRPVLIEAMSYRISHHSTSDDSFAYRARVEVEDWKRRDN 296 Query: 310 PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 PI ++RK L K E E N++K + ++ A+ +K+P ++ D+ Sbjct: 297 PITRLRKYLEKRKVWDEAKEIEARTNIKKEVLKTLSEAEKEKKPPIKSMFEDV 349 >gi|307295438|ref|ZP_07575274.1| dehydrogenase E1 component [Sphingobium chlorophenolicum L-1] gi|306878477|gb|EFN09697.1| dehydrogenase E1 component [Sphingobium chlorophenolicum L-1] Length = 77 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 49/73 (67%), Positives = 61/73 (83%), Gaps = 1/73 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 YR M+LIRRFEEKAGQLYG+G++GGFCHL IGQEAV VG++ +L G D +IT YR+HGH Sbjct: 5 YRQMVLIRRFEEKAGQLYGLGLIGGFCHLYIGQEAVAVGIQSALEPGKDSVITGYRDHGH 64 Query: 115 ILACGVDASKIMA 127 +LA G+D + IMA Sbjct: 65 MLAYGIDPNVIMA 77 >gi|330810242|ref|YP_004354704.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring), (2-oxoisovalerate dehydrogenase), alpha subunit [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378350|gb|AEA69700.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring), (2-oxoisovalerate dehydrogenase), alpha subunit [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 411 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 120/250 (48%), Gaps = 6/250 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ ++L D YR+ ++A V ++ +L + KG+ Sbjct: 106 FYMQSLGEEAIGSAQALALNIDDMCFPTYRQQSILMAREVPLVDLICQLLSNERDPLKGR 165 Query: 141 GGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + M+S KN GF+ G + Q G G A+ + KI GDGA + + Sbjct: 166 QLPI-MYSVKNAGFFTISGNLATQFVQGVGWGMASAIKGDTKIASAWIGDGATAESDFHT 224 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVK 258 + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++VDG D AV Sbjct: 225 ALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEATTFAGRGVGCGIASLRVDGNDFMAVY 284 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKR 317 A A R + GP +IE +TYR HS S DP+ YR ++ + DPI ++++ Sbjct: 285 AASRWAAERARRNLGPALIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLG-DPIARLKQH 343 Query: 318 LLH-NKWASE 326 ++ +W+ E Sbjct: 344 MVKIGQWSEE 353 >gi|156089083|ref|XP_001611948.1| dehydrogenase E1 component family protein [Babesia bovis] gi|154799202|gb|EDO08380.1| dehydrogenase E1 component family protein [Babesia bovis] Length = 447 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 4/271 (1%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EA+ +G ++LT D + YRE G + G + +L +G KG+ + Sbjct: 135 GEEAMQIGCGLALTPEDHIFGQYRELGVLFCKGFTVDDALNQLFANKGDECKGRQMPISY 194 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 + + + +Q+ G +A K +++ V FG+GAA++G + + N+AA+ Sbjct: 195 SKKECNIHAICTPLTSQLPHAAGAGYALKLAKANACAVGFFGEGAASEGDFHAAMNMAAV 254 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 I+ NN YA+ T V + RGV++ +P ++VDG D+ A A Sbjct: 255 RQSQTIFACRNNGYAISTPVRDQYRGDGIAIRGVAYGMPSIRVDGNDLFASYIATKHARE 314 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNH-DPIEQVRKRLLHNK-W 323 +C H PI IE +TYR HS SD ++ YR E + S + I +V+ L W Sbjct: 315 HCIKHSTPICIEYMTYRLGHHSTSDESSQYRGAGEFDVWTSGGINAINRVKTYLEKRGIW 374 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 +E D +E++ RK + + + K D Sbjct: 375 DNERD-EELQKEARKYMLKKIREVEQIKHCD 404 >gi|296446210|ref|ZP_06888157.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylosinus trichosporium OB3b] gi|296256247|gb|EFH03327.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylosinus trichosporium OB3b] Length = 380 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 86/345 (24%), Positives = 154/345 (44%), Gaps = 19/345 (5%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLML 60 M + ++ V D+ + ++P + A C P E L Y M Sbjct: 12 MMLEAENAMVADVSIPIDP---LRFLAPDGALCGAPP------AEAIAPELALRLYHAMA 62 Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 R ++ KA L G +G F +GQEA+ VG+ ++ E D + +YR+HG L G+ Sbjct: 63 RTRAYDSKAVALQRTGKLGTFAS-ALGQEAIGVGVGAAMREEDVLAPSYRDHGAQLLRGM 121 Query: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 M E GG +G ++ + VG Q++ G A+A K R Sbjct: 122 S----MTENLVYWGGDERGSD-----YAVPRRDFPICVPVGTQIAHAVGAAYAFKLRGEA 172 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 + V GDG + G Y + N+A ++++ ++ V+ NNQ+A+ T S +A + + + Sbjct: 173 SVAVAIIGDGGTSTGDFYSALNMAGVFDVPLVVVVNNNQWAISTPCSLETAAPTIAHKAI 232 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREE 300 + + G++VDG D A+ ++A+ R+ G +IE L+YR H+ +D A + Sbjct: 233 AAGVAGLRVDGNDALAMHHVANRAIETARSGGGATLIEALSYRLGDHTTADDATRYRDPD 292 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + + +PI ++R L +E D + + + +VE Sbjct: 293 VVRRAATQEPIARLRNYLTKRGLWNEEDEARLGRENAEEVERAVE 337 >gi|104782857|ref|YP_609355.1| 2-oxoisovalerate dehydrogenase subunit alpha [Pseudomonas entomophila L48] gi|95111844|emb|CAK16568.1| 2-oxoisovalerate dehydrogenase, alpha subunit [Pseudomonas entomophila L48] Length = 410 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 11/291 (3%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ G ++L D YR+ ++A V +++ +L KG+ Sbjct: 105 FYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMAREVSLVEMICQLLSNTRDPLKGR 164 Query: 141 GGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + M+S + GF+ G + Q G A A+ + KI GDGA + + Sbjct: 165 QLPI-MYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHT 223 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVK 258 + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++VDG D AV Sbjct: 224 ALTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFIAVY 283 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKR 317 A A R GP +IE +TYR HS S DP+ YR ++ + DPI ++++ Sbjct: 284 AASRWAAERARCGLGPTLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLG-DPIARLKQH 342 Query: 318 LLH-NKWASEGDL---KEIEMNVRKIINNSVEFA--QSDKEPDPAELYSDI 362 L+ W+ E E+E V K ++ +F + P A ++ D+ Sbjct: 343 LIKAGHWSEEEHQAVSAELEAEVIKAQKDAEQFGTLSNGHIPSAASMFEDV 393 >gi|237804687|ref|YP_002888841.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis B/TZ1A828/OT] gi|231272987|emb|CAX09899.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis B/TZ1A828/OT] Length = 678 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 84/303 (27%), Positives = 138/303 (45%), Gaps = 7/303 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHL-CIGQEAVIVGMKMSLTEG-DQMITAYREHG 113 +RL +R E K L GG L C G E V SL G D YR+ G Sbjct: 16 FRLAWTLRFSERKMLLLSRQSGSGGSFQLSCAGHELAGVVAAKSLIPGKDWAFPYYRDQG 75 Query: 114 HILACGVDASKIMAELTGRQG-GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L G D S+I A R S G+ H K +VG Q G A+ Sbjct: 76 FPLGLGCDLSEIFASFLARTTQNHSAGRMMPYHYSHKKLRICCQSSVVGTQFLQAAGRAW 135 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 K ++ V GDG+ +QG+ +E N +L L ++ I+NNQ+A+ + Sbjct: 136 GVKNSGKSEVVYVSGGDGSTSQGEFHEMLNFVSLHQLPLVIAIQNNQWAISVPFADQCG- 194 Query: 233 TNFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + G S++ + +VDG D+ A+ T ++AV+ R P ++ + R HS SD Sbjct: 195 ADLVALGNSYSGLATYEVDGGDVSALTQTFERAVSDVRHRHIPALVIVNVVRLESHSNSD 254 Query: 292 -PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 A YR+ E+++ ++ DP+ ++ K LL + + +++I+ +++ +N + E A+S Sbjct: 255 NQAKYRSEEDLSCCQA-QDPLVRLEKSLLDDFGVAHEVIEQIKAELQETVNQACELAESA 313 Query: 351 KEP 353 P Sbjct: 314 PFP 316 >gi|111052873|gb|ABH03701.1| PdhG [Bacillus subtilis] Length = 280 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 75/250 (30%), Positives = 120/250 (48%), Gaps = 11/250 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + + +Q R M+ IR ++++ L G +G F GQEA + +L + D Sbjct: 41 MPDLSDDQLKELMRRMVYIRILDQRSISLSRQGRLG-FYAPTAGQEASQIASHFALEQDD 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + S+G M N I+GAQ Sbjct: 100 FILPGYRDVPQLIWHGLPLHQAFL--------FSRGHFKGNQMPEGVNAL-SPQIIIGAQ 150 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G+A K R + + GDG A+QG YE N A + I+V++NN+YA+ Sbjct: 151 IIQTAGVALGLKKRGKKAVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAIS 210 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T V + S+ +++ V+ I G+QVDGMD AV A +A +GP +IE LT+R Sbjct: 211 TPVEKQSSAQTIAQKAVAVGITGVQVDGMDALAVYAATAEARQRAINGEGPTLIETLTFR 270 Query: 284 YRGHSMS-DP 292 Y H+MS DP Sbjct: 271 YGPHTMSGDP 280 >gi|166154552|ref|YP_001654670.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis 434/Bu] gi|166155427|ref|YP_001653682.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335814|ref|ZP_07224058.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis L2tet1] gi|165930540|emb|CAP04035.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis 434/Bu] gi|165931415|emb|CAP06989.1| 2-oxoisovalerate dehydrogenase alpha subunit [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 678 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 84/303 (27%), Positives = 138/303 (45%), Gaps = 7/303 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHL-CIGQEAVIVGMKMSLTEG-DQMITAYREHG 113 +RL +R E K L GG L C G E V SL G D YR+ G Sbjct: 16 FRLAWTLRFSERKMLLLSRQSGSGGSFQLSCAGHELAGVVAAKSLIPGKDWAFPYYRDQG 75 Query: 114 HILACGVDASKIMAELTGRQG-GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L G D S+I A R S G+ H K +VG Q G A+ Sbjct: 76 FPLGLGCDLSEIFASFLARTTQNHSAGRMMPYHYSHKKLRICCQSSVVGTQFLQAAGRAW 135 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 K ++ V GDG+ +QG+ +E N A+L L ++ I+NNQ+A+ + Sbjct: 136 GVKNSGKSEVVYVSGGDGSTSQGEFHEMLNFASLHQLPLVIAIQNNQWAISVPFADQCG- 194 Query: 233 TNFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + G S++ + +VDG D+ + T ++AV+ R P ++ + R HS SD Sbjct: 195 ADLVALGNSYSGLATYEVDGGDVSVLTQTFERAVSDARHRHIPALVIVNVVRLESHSNSD 254 Query: 292 -PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 A YR+ E+++ ++ DP+ ++ K LL + + +++I+ +++ +N + E A+S Sbjct: 255 NQAKYRSEEDLSCCQA-QDPLVRLEKSLLDDFGVAHEVIEQIKAELQETVNQACELAESA 313 Query: 351 KEP 353 P Sbjct: 314 PFP 316 >gi|323499188|ref|ZP_08104166.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio sinaloensis DSM 21326] gi|323315821|gb|EGA68854.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Vibrio sinaloensis DSM 21326] Length = 363 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 19/280 (6%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y+ M++ R ++ KA L G +G + HL G E V + ++ D I YR+ Sbjct: 35 YQDMVMSRTYDNKAVALQRTGKLGTYPSHL--GAEGYGVAIGHAMHANDVFIPYYRDMPA 92 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH----GIVGAQVSLGTGI 170 + G+ K + G + G F+ +G + Q + G+ Sbjct: 93 MWVRGIPMEKNLQYWGGDERGSD---------FTALDGTPSRDLPFCVPIATQCTHAVGV 143 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A K K +V GDGA ++G ES N A WNL +++V+ NNQ+A+ + Sbjct: 144 ASALKIEGQHKAALVTCGDGATSKGDFLESINCAGAWNLPLVFVVNNNQWAISVPRNLQC 203 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A S++ I G+ VDG DI A+ + A+ R KGP +IE ++YR H+ + Sbjct: 204 AAEFLSEKAKGAGIKGVTVDGNDIVAMHDVVLAALDRARKGKGPTLIEAVSYRLSDHTTA 263 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLL-HNKWASEGD 328 D A YR+ +E+ + +DP+ ++++ L+ W E D Sbjct: 264 DDATRYRSDDELKQAW-RYDPVSRMKQYLITQGLWNEEKD 302 >gi|329942678|ref|ZP_08291457.1| transketolase, C-terminal domain protein [Chlamydophila psittaci Cal10] gi|332287273|ref|YP_004422174.1| putative oxoisovalerate dehydrogenase [Chlamydophila psittaci 6BC] gi|313847858|emb|CBY16852.1| putative oxidoreductase [Chlamydophila psittaci RD1] gi|325506658|gb|ADZ18296.1| putative oxoisovalerate dehydrogenase [Chlamydophila psittaci 6BC] gi|328814938|gb|EGF84927.1| transketolase, C-terminal domain protein [Chlamydophila psittaci Cal10] gi|328914519|gb|AEB55352.1| 2-oxoisovalerate dehydrogenase, E1 component, beta subunit [Chlamydophila psittaci 6BC] Length = 678 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 82/289 (28%), Positives = 130/289 (44%), Gaps = 6/289 (2%) Query: 79 GGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQG-GI 136 G F C G E V V SL G D YR+ G + G D S+I A R Sbjct: 40 GTFQLSCAGHELVGVVAGKSLIPGKDWSFPYYRDQGFPVGLGCDLSEIFASFLARLAPNH 99 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 S G+ H K +VG+Q G A+A K+ +S+++ V GDG+ +QG+ Sbjct: 100 SSGRMMPYHYSHKKLRICCQSSVVGSQFLQAAGRAWAVKHTKSNEVVYVSGGDGSTSQGE 159 Query: 197 VYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN-IPGMQVDGMDIR 255 +E N AL L V+ VI+NN +A+ + T+ + G S+ + +VDG D Sbjct: 160 FHEMLNYVALHKLPVVTVIQNNAWAISVPF-KDQCSTDLVRLGESYQGLSVYEVDGGDYF 218 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQV 314 + T KAV R P +I + R HS SD YR+RE+++ +SN DP+ ++ Sbjct: 219 ELVDTFSKAVDQARHASVPALILVNVMRLEPHSNSDNHEKYRSREDLDHCKSN-DPLVRL 277 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + ++ S ++ +I+ + + E A+ P D+ Sbjct: 278 ERLMIDECGISPAEILDIKAEAEFEVTRACEIAEGMPFPSKGSTSHDVF 326 >gi|70951003|ref|XP_744777.1| branched-chain alpha keto-acid dehydrogenase [Plasmodium chabaudi chabaudi] gi|56524869|emb|CAH76300.1| branched-chain alpha keto-acid dehydrogenase, putative [Plasmodium chabaudi chabaudi] Length = 432 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/263 (27%), Positives = 125/263 (47%), Gaps = 11/263 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI--GQEAVIVGMKMSLTE 101 + F+ E+ L+ Y+ M+ ++E YG+ G + G+E + G+ +LT Sbjct: 78 TAPFDDEEVLNLYKQMVEFSIWDEI---FYGIQRQGRISFYIVNDGEEGLHFGIGKALTV 134 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI-- 159 D + YRE G +L+ G I+ +L G + +GKG M + TK H I Sbjct: 135 DDHLYCQYRETGILLSRGFTYEDILNQLFGTKYD-DEGKGRQMCICYTKKDL-NIHTITT 192 Query: 160 -VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 +G+Q+S G +A K + GDG++++G Y + N A++ +++ +NN Sbjct: 193 PLGSQLSHAAGCGYALKLDNKKAVAATFCGDGSSSEGDFYAAVNFASVRQSQTMFICKNN 252 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 YA+ TS+ + R ++ + ++VDG D+ A K C P+ +E Sbjct: 253 LYAISTSIKDQYRGDGIAPRALALGVESIRVDGNDLFASYLATKKMRDICIQESKPVFME 312 Query: 279 MLTYRYRGHSMSDPAN-YRTREE 300 ++YRY HS SD + YR +EE Sbjct: 313 FMSYRYGHHSTSDDSTLYRPKEE 335 >gi|294506482|ref|YP_003570540.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Salinibacter ruber M8] gi|294342810|emb|CBH23588.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Salinibacter ruber M8] Length = 805 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 85/319 (26%), Positives = 138/319 (43%), Gaps = 10/319 (3%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-- 102 ++F + R M+L RR +EK L G G F C G EAV + G Sbjct: 134 ADFEPDDLRQRLRTMMLSRRLDEKMMTLLKQGE-GHFHIGCAGHEAVQSALSRYSRPGEG 192 Query: 103 ---DQMITAYREHGHILACGVDASK-IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 D YR+ L+ G+ + ++A L S G+ H Sbjct: 193 PGHDWFCFYYRDLCMALSLGMTTKEALLAHLAKADDPNSGGRQMPEHFGLKHLNVMTTAS 252 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 VGAQ + G G F + R D + GDGA +QG +E+ N AA ++++++N Sbjct: 253 SVGAQFNPGVGFGFGIQQRGEDSYVYISCGDGATSQGDFHEALNWAAREQAPALFLVQDN 312 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 +YA+ + +A K + + M+VDG D A A A+ + R KGP+ + Sbjct: 313 KYAISVPIEEQTAGGTPYKLAAGYEGLSRMRVDGTDFFASAAAAQAAIQHIRDGKGPVCL 372 Query: 278 EMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 R HS SD YRT +E+ R DPI+++ L+ +E D + ++ V Sbjct: 373 VADVVRLLPHSSSDDHTKYRTPDELEADR-KIDPIDRLEAALIGEGILTEADAEALQEEV 431 Query: 337 RKIINNSVEFAQSDKEPDP 355 + ++ + E+A+ +P P Sbjct: 432 HEEVDEATEWAKRQDDPSP 450 >gi|82594584|ref|XP_725487.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Plasmodium yoelii yoelii str. 17XNL] gi|23480511|gb|EAA17052.1| branched-chain alpha-keto acid dehydrogenase E1-alpha subunit [Plasmodium yoelii yoelii] Length = 431 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 12/263 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI--GQEAVIVGMKMSLTE 101 + F E+ L+ Y+ M+ ++E YG+ G + G+E + G+ +LT Sbjct: 78 TAPFEDEEVLNLYKQMVEFSIWDEI---FYGIQRQGRISFYIVNDGEEGLHYGIGKALTV 134 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI-- 159 D + YRE G +L+ G I+ +L G + +GKG M + TK H I Sbjct: 135 DDHLYCQYRETGILLSRGFTYEDILNQLFGTK--YDEGKGRQMCICYTKKDL-NIHTITT 191 Query: 160 -VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 +G+Q+S G +A K + GDG++++G Y + N A++ +++ +NN Sbjct: 192 PLGSQLSHAAGCGYALKLDNKKAVAATFCGDGSSSEGDFYAAVNFASVRQSQTMFICKNN 251 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 YA+ TS+ + R ++ + ++VDG D+ A K C P+ +E Sbjct: 252 LYAISTSIKDQYRGDGIAPRALALGVESIRVDGNDLFASYLATKKMRDICIQESKPVFME 311 Query: 279 MLTYRYRGHSMSDPAN-YRTREE 300 ++YRY HS SD + YR +EE Sbjct: 312 FMSYRYGHHSTSDDSTLYRPKEE 334 >gi|94968813|ref|YP_590861.1| dehydrogenase, E1 component [Candidatus Koribacter versatilis Ellin345] gi|94550863|gb|ABF40787.1| dehydrogenase, E1 component [Candidatus Koribacter versatilis Ellin345] Length = 736 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 50/375 (13%) Query: 25 RAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 + AT+S V+ + EG +E L AYRLM L RR +++ L V F + Sbjct: 9 KPATASTKAVNKTY-EGL-----TREDLLRAYRLMYLSRRIDDREILLKRQQRV--FFQI 60 Query: 85 C-IGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 G EA++V + L G D YR+ LA G+ A ++ L G G + G Sbjct: 61 SGAGHEAMLVAAGLLLKPGYDWFFPYYRDRALCLALGMTAEEM---LLGAVGAAADPNSG 117 Query: 143 SMHMFSTKNGFYG-----GHGIVGAQVSLGTGIAFANK---------------YRR---- 178 M + G G G G+Q+ G A A + YR Sbjct: 118 GRQM-PSHWGHKGLNIVTGSSPTGSQILHAVGCAEAGRLFNAHPDSAAKAEGDYREFKDV 176 Query: 179 ---SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 D++ V GDG +QG+ +E+ + A+ L V++V+E+N YA+ T V + N Sbjct: 177 VFHGDEVSYVSCGDGTTSQGEFWEALSSASNNKLPVLFVVEDNGYAISTPVEVNTPGGNI 236 Query: 236 SKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 SK F N + DG ++ +A+ Y RA KGP + R HS+SD Sbjct: 237 SKVVSGFPNFHFEECDGTEVLESYRAFKRAIDYIRAGKGPAFVHGHVIRPYSHSLSDDEK 296 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 E + +N DPI + K L+ A++ +LK+++ +V + +S + A + P Sbjct: 297 LYRPEAERKDEANRDPITKFYKWLVAESLATDKELKDLQTDVDTEVQDSSDRAV--EAPI 354 Query: 355 PA------ELYSDIL 363 PA LYS L Sbjct: 355 PALDSYSQHLYSSTL 369 >gi|268570941|ref|XP_002640879.1| Hypothetical protein CBG15770 [Caenorhabditis briggsae] Length = 467 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/246 (27%), Positives = 118/246 (47%), Gaps = 3/246 (1%) Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ KI +E T + + + MH + + F + Q+ G A+A K ++ Sbjct: 195 GLKLVKIGSESTKLKNELKLRRQMPMHFGAKERNFVTISSPLTTQLPQAVGSAYAFKQQK 254 Query: 179 SD-KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + +I VV FGDGAA++G + +FN AA +I+ NN YA+ T S + Sbjct: 255 DNQRIVVVYFGDGAASEGDAHAAFNFAATLKCPIIFFCRNNGYAISTPTSEQYGGDGIAG 314 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YR 296 +G ++ + ++VDG D+ AV +A ++ P++IE +TYR HS SD + YR Sbjct: 315 KGPAYGLHTIRVDGNDLLAVYNATKEARRVALTNR-PVLIEAMTYRLGHHSTSDDSTAYR 373 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 + EE+ PI + K + W +E K+ + V+K + A+ K+ Sbjct: 374 SAEEVETWGDKDHPITRFNKYITERGWWNEEKEKDWQKEVKKRVLTEFSAAEKRKKAHYH 433 Query: 357 ELYSDI 362 +L+ D+ Sbjct: 434 DLFDDV 439 >gi|313497748|gb|ADR59114.1| 2-oxoisovalerate dehydrogenase subunit alpha [Pseudomonas putida BIRD-1] Length = 410 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 6/250 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ G ++L D YR+ ++A V +++ +L + KG+ Sbjct: 105 FYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGR 164 Query: 141 GGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + M+S + GF+ G + Q G A A+ + KI GDGA + + Sbjct: 165 QLPI-MYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHT 223 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVK 258 + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++VDG D AV Sbjct: 224 ALTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVY 283 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKR 317 A A R GP +IE +TYR HS S DP+ YR ++ + DPI ++++ Sbjct: 284 AASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLG-DPIARLKQH 342 Query: 318 LLH-NKWASE 326 L+ W+ E Sbjct: 343 LIKIGHWSEE 352 >gi|167034957|ref|YP_001670188.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Pseudomonas putida GB-1] gi|166861445|gb|ABY99852.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Pseudomonas putida GB-1] Length = 410 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 6/250 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ G ++L D YR+ ++A V +++ +L + KG+ Sbjct: 105 FYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGR 164 Query: 141 GGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + M+S + GF+ G + Q G A A+ + KI GDGA + + Sbjct: 165 QLPI-MYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHT 223 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVK 258 + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++VDG D AV Sbjct: 224 ALTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVY 283 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKR 317 A A R GP +IE +TYR HS S DP+ YR ++ + DPI ++++ Sbjct: 284 AASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLG-DPIARLKQH 342 Query: 318 LLH-NKWASE 326 L+ W+ E Sbjct: 343 LIKIGHWSEE 352 >gi|26991090|ref|NP_746515.1| 3-methyl-2-oxobutanoate dehydrogenase [Pseudomonas putida KT2440] gi|24986126|gb|AAN69979.1|AE016636_2 2-oxoisovalerate dehydrogenase, alpha subunit [Pseudomonas putida KT2440] Length = 410 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 6/250 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ G ++L D YR+ ++A V +++ +L + KG+ Sbjct: 105 FYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGR 164 Query: 141 GGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + M+S + GF+ G + Q G A A+ + KI GDGA + + Sbjct: 165 QLPI-MYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHT 223 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVK 258 + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++VDG D AV Sbjct: 224 ALTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVY 283 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKR 317 A A R GP +IE +TYR HS S DP+ YR ++ + DPI ++++ Sbjct: 284 AASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLG-DPIARLKQH 342 Query: 318 LLH-NKWASE 326 L+ W+ E Sbjct: 343 LIKIGHWSEE 352 >gi|1352616|sp|P09060|ODBA_PSEPU RecName: Full=2-oxoisovalerate dehydrogenase subunit alpha; AltName: Full=Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; Short=BCKDH E1-alpha gi|75766368|pdb|2BP7|A Chain A, New Crystal Form Of The Pseudomonas Putida Branched-Chain Dehydrogenase (E1) gi|75766370|pdb|2BP7|C Chain C, New Crystal Form Of The Pseudomonas Putida Branched-Chain Dehydrogenase (E1) gi|75766372|pdb|2BP7|E Chain E, New Crystal Form Of The Pseudomonas Putida Branched-Chain Dehydrogenase (E1) gi|75766374|pdb|2BP7|G Chain G, New Crystal Form Of The Pseudomonas Putida Branched-Chain Dehydrogenase (E1) gi|790514|gb|AAA65614.1| keto acid dehydrogenase E1-alpha subunit [Pseudomonas putida] Length = 410 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 6/250 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ G ++L D YR+ ++A V +++ +L + KG+ Sbjct: 105 FYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGR 164 Query: 141 GGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + M+S + GF+ G + Q G A A+ + KI GDGA + + Sbjct: 165 QLPI-MYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHT 223 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVK 258 + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++VDG D AV Sbjct: 224 ALTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVY 283 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKR 317 A A R GP +IE +TYR HS S DP+ YR ++ + DPI ++++ Sbjct: 284 AASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLG-DPIARLKQH 342 Query: 318 LLH-NKWASE 326 L+ W+ E Sbjct: 343 LIKIGHWSEE 352 >gi|148546693|ref|YP_001266795.1| 3-methyl-2-oxobutanoate dehydrogenase [Pseudomonas putida F1] gi|148510751|gb|ABQ77611.1| branched-chain alpha-keto acid dehydrogenase E1 component [Pseudomonas putida F1] Length = 410 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 6/250 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ G ++L D YR+ ++A V +++ +L + KG+ Sbjct: 105 FYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGR 164 Query: 141 GGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + M+S + GF+ G + Q G A A+ + KI GDGA + + Sbjct: 165 QLPI-MYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHT 223 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVK 258 + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++VDG D AV Sbjct: 224 ALTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVY 283 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKR 317 A A R GP +IE +TYR HS S DP+ YR ++ + DPI ++++ Sbjct: 284 AASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLG-DPIARLKQH 342 Query: 318 LLH-NKWASE 326 L+ W+ E Sbjct: 343 LIKIGHWSEE 352 >gi|238059399|ref|ZP_04604108.1| dehydrogenase E1 component [Micromonospora sp. ATCC 39149] gi|237881210|gb|EEP70038.1| dehydrogenase E1 component [Micromonospora sp. ATCC 39149] Length = 203 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 83/142 (58%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++ + YR + LIRRFEE+A L G + G H +GQE + G+ +L + D + Sbjct: 41 TRDDPVRLYRTVRLIRRFEERAVALVRSGAIVGGIHPYLGQEGIAAGVCAALRDEDLVTG 100 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH+LA G D ++++AEL GR+ G+++G+GGSMH G G + IVGA ++ Sbjct: 101 THRGHGHVLAKGADPARMLAELLGRETGLNRGRGGSMHAADLGIGVLGANAIVGAAGAIL 160 Query: 168 TGIAFANKYRRSDKICVVCFGD 189 TG +A + R D + FGD Sbjct: 161 TGAVWARRRRGDDLVGATFFGD 182 >gi|238023732|ref|YP_002907964.1| 2-oxoisovalerate dehydrogenase, E1 component subunit alpha [Burkholderia glumae BGR1] gi|237878397|gb|ACR30729.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha subunit [Burkholderia glumae BGR1] Length = 410 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/290 (27%), Positives = 127/290 (43%), Gaps = 9/290 (3%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ +L GD +YR+ ++ V +M +L KG+ Sbjct: 105 FYMQSLGEEAIGTAHSFALDNGDMCFPSYRQQSILITREVPLVDLMCQLMSNDRDPLKGR 164 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 + + GF+ G + Q G A A+ + +I GDGA + + + Sbjct: 165 QLPVMYSNRAAGFFTISGNLATQFIQAVGWAMASAIKGDTRIASAWIGDGATAEADFHTA 224 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKA 259 A ++ VI + NNQ+A+ T + A + F+ RGV I ++VDG D AV A Sbjct: 225 LTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGATFAGRGVGCGIASLRVDGNDFLAVYA 284 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 A R + GP +IE +TYR HS S DP+ YR ++ DPIE+ ++ L Sbjct: 285 ASRWAAERARRNLGPTLIEWVTYRAGPHSTSDDPSKYRPGDDWTHFPLG-DPIERFKRHL 343 Query: 319 L-HNKWASE--GDLK-EIEMNVRKIINNSVEFAQ--SDKEPDPAELYSDI 362 + W+ + DLK +E V + F D+ D A + D+ Sbjct: 344 IGEGIWSEQEHADLKGALEAEVIAAQKEAERFGTLGDDRVADVASFFEDV 393 >gi|315281782|ref|ZP_07870339.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Listeria marthii FSL S4-120] gi|313614572|gb|EFR88159.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Listeria marthii FSL S4-120] Length = 197 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 3/133 (2%) Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDG ++QG YE N A ++ I+V++NN++A+ T + SA +++ V+ IPG+ Sbjct: 1 GDGGSSQGDFYEGMNFAGAYHAPAIFVVQNNKFAISTPREKQSAAETLAQKAVAAGIPGV 60 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMR 305 QVDGMD AV A A A +GP +IE +TYRY H++S DP YRT+E E Sbjct: 61 QVDGMDPLAVYAVTKFARERAVAGEGPTLIETMTYRYGPHTLSGDDPTRYRTKELDGEWE 120 Query: 306 SNHDPIEQVRKRL 318 DPI + R L Sbjct: 121 LK-DPIVRFRTFL 132 >gi|325274814|ref|ZP_08140841.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Pseudomonas sp. TJI-51] gi|324100059|gb|EGB97878.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Pseudomonas sp. TJI-51] Length = 410 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 6/250 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ G ++L D YR+ ++A V ++ +L + KG+ Sbjct: 105 FYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVDMICQLLSNERDPLKGR 164 Query: 141 GGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + M+S + GF+ G + Q G A A+ + KI GDGA + + Sbjct: 165 QLPI-MYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHT 223 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVK 258 + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++VDG D AV Sbjct: 224 ALTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVY 283 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKR 317 A A R GP +IE +TYR HS S DP+ YR ++ + DPI ++++ Sbjct: 284 AASRWAAERARRGMGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLG-DPIARLKQH 342 Query: 318 LLH-NKWASE 326 L+ W+ E Sbjct: 343 LIKIGHWSEE 352 >gi|71029424|ref|XP_764355.1| branched-chain alpha keto-acid dehydrogenase [Theileria parva strain Muguga] gi|68351309|gb|EAN32072.1| branched-chain alpha keto-acid dehydrogenase, putative [Theileria parva] Length = 464 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 29/235 (12%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYR----------EHGHILACGVDASKIMAEL------- 129 G+EA +G ++L D + YR E G I G ++A+L Sbjct: 140 GEEATQLGAGLALQPQDHLFCQYRYFTKDYKNFRELGVIYVKGCTEDDVLAQLFSTHKDE 199 Query: 130 -TGRQGGISKGKGG-SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 GRQ IS K ++H +T + +Q+ +G +A K + +D + +V F Sbjct: 200 GKGRQMPISYSKKEVNLHTITTP---------LSSQIPQASGSGYALKMQGADAVAMVFF 250 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 G+GAA++G + + N AA+ I+ NN Y++ T V + RGV+ IP + Sbjct: 251 GEGAASEGDCHAAMNFAAVRQAQTIFACRNNSYSISTPVRDQYIGDGIAIRGVALGIPSI 310 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEI 301 +VDG D+ A YC H PI+IE +TYR HS SD ++ YR + E Sbjct: 311 RVDGNDLFASYMATKYCREYCVKHSTPIVIEYMTYRIGHHSTSDESSQYRGKGEF 365 >gi|83816020|ref|YP_444719.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Salinibacter ruber DSM 13855] gi|83757414|gb|ABC45527.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Salinibacter ruber DSM 13855] Length = 700 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 85/319 (26%), Positives = 137/319 (42%), Gaps = 10/319 (3%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-- 102 ++F + R M+L RR +EK L G G F C G EAV + G Sbjct: 29 ADFEPDDLRQRLRTMMLSRRLDEKMMTLLKQGE-GHFHIGCAGHEAVQSALSRYSRPGEG 87 Query: 103 ---DQMITAYREHGHILACGVDASK-IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 D YR+ L+ G+ + ++A L S G+ H Sbjct: 88 PGHDWFCFYYRDLCMALSLGMTTKEALLAHLAKADDPNSGGRQMPEHFGLKHLNVMTTAS 147 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 VGAQ + G G F + R D + GDGA +QG +E+ N AA ++++++N Sbjct: 148 SVGAQFNPGVGFGFGIQQRGEDSYVYISCGDGATSQGDFHEALNWAAREQAPALFLVQDN 207 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 +YA+ + +A K + + M+VDG D A A A+ + R KGP+ + Sbjct: 208 KYAISVPIEEQTAGGTPYKLAAGYEGLSRMRVDGTDFFASAAAAQAAIQHIRDGKGPVCL 267 Query: 278 EMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 R HS SD YRT +E+ R DPI+++ L+ +E D + ++ V Sbjct: 268 VADVVRLLPHSSSDDHTKYRTPDELEADRKI-DPIDRLEAALIGEGILTEADAEALQEEV 326 Query: 337 RKIINNSVEFAQSDKEPDP 355 + ++ + E+A+ P P Sbjct: 327 HEEVDEATEWAKRQDGPSP 345 >gi|70729902|ref|YP_259641.1| 2-oxoisovalerate dehydrogenase E1 component subunit alpha [Pseudomonas fluorescens Pf-5] gi|68344201|gb|AAY91807.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Pseudomonas fluorescens Pf-5] Length = 411 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 6/250 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ ++L D YR+ ++A V +++ +L + KG+ Sbjct: 106 FYMQSLGEEAIGSAQALALNIDDMCFPTYRQQSILMAREVPLVEMICQLLSNERDPLKGR 165 Query: 141 GGSMHMFSTK-NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + M+S K +GF+ G + Q G G A+ + KI GDGA + + Sbjct: 166 QLPI-MYSVKESGFFTISGNLATQFVQGVGWGMASAIKGDTKIASAWIGDGATAESDFHT 224 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVK 258 + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++VDG D AV Sbjct: 225 ALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEATTFAGRGVGCGIASLRVDGNDFIAVY 284 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKR 317 A R + GP +IE +TYR HS S DP+ YR ++ + DPI ++++ Sbjct: 285 TASRWAAERARRNLGPTLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLG-DPIARLKQH 343 Query: 318 LLH-NKWASE 326 L+ +W+ E Sbjct: 344 LIKIGQWSEE 353 >gi|71411831|ref|XP_808139.1| 2-oxoisovalerate dehydrogenase alpha subunit [Trypanosoma cruzi strain CL Brener] gi|70872280|gb|EAN86288.1| 2-oxoisovalerate dehydrogenase alpha subunit, putative [Trypanosoma cruzi] Length = 431 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 84/291 (28%), Positives = 129/291 (44%), Gaps = 28/291 (9%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA--------ELTG 131 F +G+EA VG +L D++ YRE + G ++A EL G Sbjct: 113 SFYMTSMGEEASAVGTAAALDMRDELFLQYREAAALTYRGYTVKDMVAQCMGTIENELKG 172 Query: 132 RQGGISKG-KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY---RRSD----KIC 183 RQ I G + ++HM S+ V Q+ G + + R +D +IC Sbjct: 173 RQMPIHYGSRALNVHMISSP---------VATQIPHAAGTGYVCRLENERETDPNKKRIC 223 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 G+G+A+QG + N+AA N +++I NN YA+ T S A RG+ + Sbjct: 224 AAFVGEGSASQGDFHAGVNMAATMKSNTLFLIRNNGYAISTPSSSQYAGDGIFARGIGYG 283 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEIN 302 IP +VDG DI AV T+ KA R P+++E L YR HS SD + YR+REE+ Sbjct: 284 IPCARVDGNDILAVFQTVRKARELIRTTNQPVLVEALVYRSSHHSSSDDSTWYRSREEVE 343 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + P+ + K L + + + VR+ E + +K P Sbjct: 344 VFSNLFLPVARFEKYLERKSLWTPEQSRSLTQKVRQ--ETLAELHRQEKLP 392 >gi|57209618|emb|CAI41288.1| pyruvate dehydrogenase (lipoamide) alpha 1 [Homo sapiens] Length = 205 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/136 (50%), Positives = 88/136 (64%), Gaps = 4/136 (2%) Query: 27 ATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 72 ATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 131 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSM Sbjct: 132 CDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSM 191 Query: 145 HMFSTKNGFYGGHGIV 160 HM++ KN FYGG+GIV Sbjct: 192 HMYA-KN-FYGGNGIV 205 >gi|148656537|ref|YP_001276742.1| pyruvate dehydrogenase [Roseiflexus sp. RS-1] gi|148568647|gb|ABQ90792.1| branched-chain alpha-keto acid dehydrogenase E1 component [Roseiflexus sp. RS-1] Length = 334 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 84/320 (26%), Positives = 150/320 (46%), Gaps = 9/320 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 ++++ ++ R M+ R +++ L G F G EA +G ++ G D + Sbjct: 15 LSRQRLIAGLRTMIASRETDDRLWLLNRQGR-AHFVVTPAGHEATQLGCAWAIRVGHDYV 73 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ ++A G I+ R+ S G G M H S + G VG+ Sbjct: 74 VPYYRDMTLVMALGQSVLDILLHAMARRDDPSSG-GRQMFGHFSSRRLRIVSGSSSVGSH 132 Query: 164 VSLGTGIAFANKYRRSDKICVV-CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + GIA A + + I V+ FG+GA +G +E +A ++ L ++V ENNQYA+ Sbjct: 133 LVHVAGIALAFRVKGEQDIAVMGLFGEGATAEGAWHEGLTVAGIYQLPAVFVCENNQYAI 192 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 V++ + + + + G+ VDG D+ AV +A+ R+ GP ++E TY Sbjct: 193 SVPVNKEVPAPTVAAKAAGYGMHGVVVDGNDVFAVYEAAHQAMERARSGGGPTLLECKTY 252 Query: 283 RYRGH-SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R+R H S D YR EE+ R+ DPI++ L+ + + +++ + VR ++ Sbjct: 253 RFRPHTSADDDRRYRKPEEVEAWRAR-DPIKRFEHYLVEHGIITHDEIEAMRREVRAEVD 311 Query: 342 NSVEFAQSDKEPDPAELYSD 361 + + A + P P E +D Sbjct: 312 AATDAALAAPWP-PVESIAD 330 >gi|237715969|ref|ZP_04546450.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. D1] gi|262407582|ref|ZP_06084130.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 2_1_22] gi|294645732|ref|ZP_06723418.1| transketolase, C-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294808345|ref|ZP_06767100.1| transketolase, C-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229443616|gb|EEO49407.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. D1] gi|262354390|gb|EEZ03482.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 2_1_22] gi|292638938|gb|EFF57270.1| transketolase, C-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294444421|gb|EFG13133.1| transketolase, C-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 678 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 82/314 (26%), Positives = 140/314 (44%), Gaps = 9/314 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 Y LM L R +EKA + + G + + + + T G D + YR+ Sbjct: 19 YHLMTLGRALDEKAPSYLLQSLGWSYHAPYAGHDGIQLAIGQVFTLGEDFLFPYYRDMLT 78 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 +L+ G+ +I+ L G G GG S H + G G+A Sbjct: 79 VLSAGMTPEEII--LNGISKATDPGSGGRHMSNHFAKPEWHIENISSATGTHDLHAAGVA 136 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A Y + + G+ A ++G VYE+ N A+L L VI+VI++N Y + S +A Sbjct: 137 RAMVYYGHKGVAITSHGESATSEGFVYEAINGASLERLPVIFVIQDNGYGISVPKSEQTA 196 Query: 232 QTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 ++ F N+ + +G D+ M +A Y R + P+I++ R HS S Sbjct: 197 NRKVAENFSGFKNLKIIYCNGKDVFDSMNAMTEAHEYARETRNPVIVQANCVRIGSHSNS 256 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D YR E+ E + DP+ + R+ LL K +E +L++IE + +K ++ + A + Sbjct: 257 DKHTLYRDENEL-EYVKDADPLMKFRRMLLRYKRLTEEELQQIEADAKKELSAANRKALA 315 Query: 350 DKEPDPAELYSDIL 363 +PDP +Y ++ Sbjct: 316 APDPDPKSIYDFVM 329 >gi|298483509|ref|ZP_07001685.1| dehydrogenase E1 component [Bacteroides sp. D22] gi|298270266|gb|EFI11851.1| dehydrogenase E1 component [Bacteroides sp. D22] Length = 678 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 82/314 (26%), Positives = 140/314 (44%), Gaps = 9/314 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 Y LM L R +EKA + + G + + + + T G D + YR+ Sbjct: 19 YHLMTLGRALDEKAPSYLLQSLGWSYHAPYAGHDGIQLAIGQVFTLGEDFLFPYYRDMLT 78 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 +L+ G+ +I+ L G G GG S H + G G+A Sbjct: 79 VLSAGMTPEEII--LNGISKATDPGSGGRHMSNHFAKPEWHIENISSATGTHDLHAAGVA 136 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A Y + + G+ A ++G VYE+ N A+L L VI+VI++N Y + S +A Sbjct: 137 RAMVYYGHKGVAITSHGESATSEGFVYEAINGASLERLPVIFVIQDNGYGISVPKSEQTA 196 Query: 232 QTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 ++ F N+ + +G D+ M +A Y R + P+I++ R HS S Sbjct: 197 NRKVAENFSGFKNLKIIYCNGKDVFDSMNAMTEAHEYARETRNPVIVQANCVRIGSHSNS 256 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D YR E+ E + DP+ + R+ LL K +E +L++IE + +K ++ + A + Sbjct: 257 DKHTLYRDENEL-EYVKDADPLMKFRRMLLRYKRLTEEELQQIEADAKKELSAANRKALA 315 Query: 350 DKEPDPAELYSDIL 363 +PDP +Y ++ Sbjct: 316 APDPDPKSIYDFVM 329 >gi|237722254|ref|ZP_04552735.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 2_2_4] gi|229448064|gb|EEO53855.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 2_2_4] Length = 678 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 82/314 (26%), Positives = 140/314 (44%), Gaps = 9/314 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 Y LM L R +EKA + + G + + + + T G D + YR+ Sbjct: 19 YHLMTLGRALDEKAPSYLLQSLGWSYHAPYAGHDGIQLAIGQVFTLGEDFLFPYYRDMLT 78 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 +L+ G+ +I+ L G G GG S H + G G+A Sbjct: 79 VLSAGMTPEEII--LNGISKATDPGSGGRHMSNHFAKPEWHIENISSATGTHDLHAAGVA 136 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A Y + + G+ A ++G VYE+ N A+L L VI+VI++N Y + S +A Sbjct: 137 RAMVYYGHKGVAITSHGESATSEGFVYEAINGASLERLPVIFVIQDNGYGISVPKSEQTA 196 Query: 232 QTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 ++ F N+ + +G D+ M +A Y R + P+I++ R HS S Sbjct: 197 NRKVAENFSGFKNLKIIYCNGKDVFDSMNAMTEAHEYARETRNPVIVQANCVRIGSHSNS 256 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D YR E+ E + DP+ + R+ LL K +E +L++IE + +K ++ + A + Sbjct: 257 DKHTLYRDENEL-EYVKDADPLMKFRRMLLRYKRLTEEELQQIEADAKKELSAANRKALA 315 Query: 350 DKEPDPAELYSDIL 363 +PDP +Y ++ Sbjct: 316 APDPDPKSIYDFVM 329 >gi|295085129|emb|CBK66652.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Bacteroides xylanisolvens XB1A] Length = 678 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 82/314 (26%), Positives = 140/314 (44%), Gaps = 9/314 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 Y LM L R +EKA + + G + + + + T G D + YR+ Sbjct: 19 YHLMTLGRALDEKAPSYLLQSLGWSYHAPYAGHDGIQLAIGQVFTLGEDFLFPYYRDMLT 78 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 +L+ G+ +I+ L G G GG S H + G G+A Sbjct: 79 VLSAGMTPEEII--LNGISKATDPGSGGRHMSNHFAKPEWHIENISSATGTHDLHAVGVA 136 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A Y + + G+ A ++G VYE+ N A+L L VI+VI++N Y + S +A Sbjct: 137 RAMVYYGHKGVVITSHGESATSEGFVYEAINGASLERLPVIFVIQDNGYGISVPKSEQTA 196 Query: 232 QTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 ++ F N+ + +G D+ M +A Y R + P+I++ R HS S Sbjct: 197 NRKVAENFSGFKNLKIIYCNGKDVFDSMNAMTEAHEYARETRNPVIVQANCVRIGSHSNS 256 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D YR E+ E + DP+ + R+ LL K +E +L++IE + +K ++ + A + Sbjct: 257 DKHTLYRDENEL-EYVKDADPLMKFRRMLLRYKRLTEEELQQIEADAKKELSAANRKALA 315 Query: 350 DKEPDPAELYSDIL 363 +PDP +Y ++ Sbjct: 316 APDPDPKSIYDFVM 329 >gi|170722905|ref|YP_001750593.1| 3-methyl-2-oxobutanoate dehydrogenase [Pseudomonas putida W619] gi|169760908|gb|ACA74224.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Pseudomonas putida W619] Length = 410 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 72/250 (28%), Positives = 118/250 (47%), Gaps = 6/250 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ ++L D YR+ ++A V +++ +L + KG+ Sbjct: 105 FYMQSLGEEAIGSAQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGR 164 Query: 141 GGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + M+S + GF+ G + Q G A A+ + KI GDGA + + Sbjct: 165 QLPI-MYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHT 223 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVK 258 + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++VDG D AV Sbjct: 224 ALTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVY 283 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKR 317 A A R GP +IE +TYR HS S DP+ YR ++ + DPI ++++ Sbjct: 284 AASRWAAERARRGLGPCLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLG-DPIARLKQH 342 Query: 318 LLH-NKWASE 326 L+ W+ E Sbjct: 343 LIKIGHWSEE 352 >gi|291228000|ref|XP_002733969.1| PREDICTED: pyruvate dehydrogenase E1 alpha 2-like [Saccoglossus kowalevskii] Length = 2788 Score = 99.8 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 50/107 (46%), Positives = 73/107 (68%), Gaps = 8/107 (7%) Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVR 315 VK + KA KGP+++E+ TYRY GHSMSDP +YRTREEI E+R + DPI R Sbjct: 2667 VKEQLQKA-------KGPMVLEVATYRYGGHSMSDPGTSYRTREEIKEVRQSRDPITGFR 2719 Query: 316 KRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +R+ N A+ +LK+I+++VRK + ++V+ A+SD E ELY+D+ Sbjct: 2720 QRITSNGLATIDELKKIDLDVRKEVEDAVQKAKSDPEISVNELYTDV 2766 >gi|154337298|ref|XP_001564882.1| 2-oxoisovalerate dehydrogenase alpha subunit [Leishmania braziliensis MHOM/BR/75/M2904] gi|134061920|emb|CAM38961.1| putative 2-oxoisovalerate dehydrogenase alpha subunit [Leishmania braziliensis MHOM/BR/75/M2904] Length = 479 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 20/291 (6%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F G+EA ++G L D++ YRE G + G + +A+ G KG+ Sbjct: 149 FYMTMFGEEAAVIGAAAGLASNDELFAQYREAGILTYRGYTIPEFIAQCMGNCECDLKGR 208 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR-----------------SDKIC 183 +H ST+ + Q+ G G +A + +IC Sbjct: 209 QMPIHYGSTRLHAQMISSPLATQIPHGAGAGYAFRLDNFALATSLPSGTLLSTVPEARIC 268 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 FG+GAA++G + N A+ + ++ NN YA+ T R + + Sbjct: 269 ATFFGEGAASEGDFHAGLNFASTVGSHTLFFARNNGYAISTPTHSQYKGDGILSRAMGYG 328 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEIN 302 IP +VDG+D AV T+ KA P+++E LTYR HS SD +N YR+R+EI Sbjct: 329 IPAARVDGLDALAVYHTVRKAREMILNSHRPVLVEALTYRLSHHSSSDDSNAYRSRDEIV 388 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +PI++ + + W + KEI RK + + E + +K P Sbjct: 389 HFAETFNPIQRFEQFMTQLGWWTPEQSKEIVEKTRKEVLS--ELRRQEKLP 437 >gi|163857824|ref|YP_001632122.1| 2-oxoisovalerate dehydrogenase alpha subunit [Bordetella petrii DSM 12804] gi|163261552|emb|CAP43854.1| 2-oxoisovalerate dehydrogenase alpha subunit [Bordetella petrii] Length = 410 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 67/241 (27%), Positives = 110/241 (45%), Gaps = 3/241 (1%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ ++L GD YR+ +L V ++M +L + KG+ Sbjct: 105 FYMQSLGEEAIGSAHALALEPGDMCFPTYRQQSILLTRDVSLVEMMCQLMSNERDPLKGR 164 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 + + GF+ G + Q G A+ + +I GDGA + + + Sbjct: 165 QLPVMYSKREAGFFSISGNLATQFIQAVGWGMASAIKGDTRIASAWIGDGATAEADFHTA 224 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKA 259 A ++ VI + NNQ+A+ T + A + F+ RGV I ++VDG D AV A Sbjct: 225 LTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGATFAGRGVGCGIASLRVDGNDFLAVYA 284 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 A R + GP +IE +TYR HS S DP+ YR ++ + DPI + ++ L Sbjct: 285 ASQWAAERARRNLGPTLIEWVTYRAGPHSTSDDPSKYRPGDDWSHFPLG-DPIARFKRHL 343 Query: 319 L 319 + Sbjct: 344 I 344 >gi|254445008|ref|ZP_05058484.1| Dehydrogenase E1 component family [Verrucomicrobiae bacterium DG1235] gi|198259316|gb|EDY83624.1| Dehydrogenase E1 component family [Verrucomicrobiae bacterium DG1235] Length = 694 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 77/315 (24%), Positives = 140/315 (44%), Gaps = 7/315 (2%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E L YR M R + + +L+ G + G G E ++ + + + + ++ Sbjct: 34 EDLLLTYRWMAYSRFADMRILELFRQGRMKGTVTCSDGNEGLVAPLALMMDKSIDCVSWT 93 Query: 110 RE--HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 GH++ G I ++ G G ++G+ G+ H N Y +G S Sbjct: 94 HRGLPGHLVWSGHLGDHI-SQYLGNAGSPTQGREGNAHHGDPANRSYPMISHLGKMSSNV 152 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G + + + + V FGDG ++ G+++E+ N+A++ NL VI+V+ENN+YA T + Sbjct: 153 MGGTDSQRRKGHKAVGVTFFGDGGSSTGEIHEAMNLASVLNLPVIFVVENNKYAYSTPLD 212 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 A R + + + G+++D +I A+ RA P++IEM + R RGH Sbjct: 213 EQYAG-KLVDRAIGYGMKGIELDVANIEENMKVFWDAIEETRATSRPMLIEMHSLRLRGH 271 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D +Y + E D + R RL+ + D ++ + + +N +V A Sbjct: 272 AGYDTCDYIDPAQTAEWE-KQDALPNFRARLVEKGYGEHLDAEDALL--KFFVNETVAKA 328 Query: 348 QSDKEPDPAELYSDI 362 DPA L D+ Sbjct: 329 FEHPPCDPAGLIEDV 343 >gi|5822330|pdb|1QS0|A Chain A, Crystal Structure Of Pseudomonas Putida 2-Oxoisovalerate Dehydrogenase (Branched-Chain Alpha-Keto Acid Dehydrogenase, E1b) Length = 407 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 71/249 (28%), Positives = 114/249 (45%), Gaps = 4/249 (1%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ G ++L D YR+ + A V + + +L + KG+ Sbjct: 104 FYXQSLGEEAIGSGQALALNRTDXCFPTYRQQSILXARDVSLVEXICQLLSNERDPLKGR 163 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 + + GF+ G + Q G A A+ + KI GDGA + + + Sbjct: 164 QLPIXYSVREAGFFTISGNLATQFVQAVGWAXASAIKGDTKIASAWIGDGATAESDFHTA 223 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKA 259 A ++ VI + NNQ+A+ T + A + T F+ RGV I ++VDG D AV A Sbjct: 224 LTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYA 283 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 A R GP +IE +TYR HS S DP+ YR ++ + DPI ++++ L Sbjct: 284 ASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLG-DPIARLKQHL 342 Query: 319 LH-NKWASE 326 + W+ E Sbjct: 343 IKIGHWSEE 351 >gi|225874704|ref|YP_002756163.1| putative pyruvate dehydrogenase, E1 component [Acidobacterium capsulatum ATCC 51196] gi|225793106|gb|ACO33196.1| putative pyruvate dehydrogenase, E1 component [Acidobacterium capsulatum ATCC 51196] Length = 726 Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 88/345 (25%), Positives = 141/345 (40%), Gaps = 30/345 (8%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLC-IGQEAVIVGMKMSLTEG- 102 + ++EQ + YRLM L RR +++ L + F + G EA +V +++ G Sbjct: 18 TSLSREQLIEIYRLMYLSRRTDDREIMLKRQQKI--FFQISGAGHEAFLVAAALAMKPGY 75 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D YR+ LA G A + + + G S G+ H S K Sbjct: 76 DWFFPYYRDRALCLALGNTAEEQLLQAVGAADDPASGGRQMPSHWTSRKLNIVSPSSSTA 135 Query: 162 AQVSLGTGIAFANKYR----------------------RSDKICVVCFGDGAANQGQVYE 199 Q G A A +Y D++ V G+G+ +QG+ +E Sbjct: 136 TQCLQAIGCADAGRYFARHPEAAAKHDGDYRAYKDVQFHGDEVVYVSIGEGSTSQGEFWE 195 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVK 258 + ++A+ L V++ +E+N YA+ V + N SK F N +VDG D Sbjct: 196 ALSVASNLKLPVVFAVEDNGYAISVPVEVNTPGGNISKVVTGFPNFHFAEVDGTDPITSY 255 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 +AVAYCRA KGP ++ R HS+SD E + DP+ + + L Sbjct: 256 DAFREAVAYCRAGKGPALVHGHVIRPYSHSLSDDDKLYRPESERHADTQRDPLTKFQLYL 315 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + E + +IE V + + + E A + P PA + IL Sbjct: 316 VREGILDESGINKIERQVDEEVRQAAERAV--RAPLPASDKASIL 358 >gi|239986259|ref|ZP_04706923.1| pyruvate dehydrogenase (acetyl-transferring) [Streptomyces roseosporus NRRL 11379] Length = 300 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 82/294 (27%), Positives = 133/294 (45%), Gaps = 27/294 (9%) Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 S R ML+ R +E+A QL G + + C GQEA VG +++ + +YREH Sbjct: 16 SILRHMLIARGVDEEARQLQKQGALDLWLS-CQGQEAAQVGSAIAVGPEATIFPSYREHA 74 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG----FYGGHGIVGAQVSLGTG 169 L GV +++A+ GR F N F+ ++ AQ G G Sbjct: 75 VALTRGVTGDELLAQWAGR-------------TFCGWNPQDRRFFPYTLVLAAQTLHGVG 121 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 + + + D + VV GDGA ++G + E+ N+AA+ + +V+++ +NN G ++S+ Sbjct: 122 YSIGRRLQGLDDLVVVYVGDGATSEGDMSEAMNLAAVESASVLFICQNN----GWAISKP 177 Query: 230 SAQ---TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +A+ T + R F I + G D V +A + R + P +IE+ R G Sbjct: 178 AAEQMLTTVADRARGFGIESALIPGDDPELVHRECVRAADHIRNRRSPYLIEIQVGRIHG 237 Query: 287 HSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 HS SD YR ++I + DP+ RL + L +E VR I Sbjct: 238 HSTSDAQEVYRGEDDIARA-TAADPVVAYTGRLTEQGVVDDEWLLCVESEVRDI 290 >gi|268571015|ref|XP_002640903.1| Hypothetical protein CBG15799 [Caenorhabditis briggsae] Length = 259 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 3/221 (1%) Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD-KICVVCFGDGAANQGQVYESFN 202 MH + + F + Q+ G A+A K ++ + +I VV FGDGAA++G + +FN Sbjct: 3 MHFGAKERNFVTISSPLTTQLPQAVGSAYAFKQQKDNQRIVVVYFGDGAASEGDAHAAFN 62 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 AA +I+ NN YA+ T S + +G ++ + ++VDG D+ AV Sbjct: 63 FAATLKCPIIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGNDLLAVYNATK 122 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHN 321 +A ++ P++IE +TYR HS SD + YR+ EE+ PI + K + Sbjct: 123 EARRVALTNR-PVLIEAMTYRLGHHSTSDDSTAYRSAEEVETWGDKDHPITRFNKYITER 181 Query: 322 KWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 W +E K+ + V+K + A+ K+ +L+ D+ Sbjct: 182 GWWNEEKEKDWQKEVKKRVLTEFSAAEKRKKAHYHDLFDDV 222 >gi|293369923|ref|ZP_06616495.1| transketolase, C-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|292635005|gb|EFF53525.1| transketolase, C-terminal domain protein [Bacteroides ovatus SD CMC 3f] Length = 678 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 81/314 (25%), Positives = 141/314 (44%), Gaps = 9/314 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 Y LM L R +EKA + + G + + + + T G D + YR+ Sbjct: 19 YHLMTLGRALDEKAPSYLLQSLGWSYHAPYAGHDGIQLAVGQVFTLGEDFLFPYYRDMLT 78 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 +L+ G+ A +++ L G G GG S H + G G+A Sbjct: 79 VLSAGMTAEEVI--LNGISKATDPGSGGRHMSNHFAKPEWHIENISSATGTHDLHAAGVA 136 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A Y + + G+ A ++G VYE+ N A+L L VI+VI++N Y + S +A Sbjct: 137 RAMVYYGHKGVAITSHGESATSEGFVYEAINGASLERLPVIFVIQDNGYGISVPKSEQTA 196 Query: 232 QTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 ++ F N+ + +G D+ M +A Y + + P+I++ R HS S Sbjct: 197 NRKVAENFSGFKNLKIIYCNGKDVFDSMNAMTEAREYAISTRNPVIVQANCVRIGSHSNS 256 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D YR E+ E + DP+ + R+ LL K +E +L++IE + +K ++ + A + Sbjct: 257 DKHTLYRDENEL-EYVKDADPLMKFRRMLLRYKRLTEEELQQIEADAKKELSAANRKALA 315 Query: 350 DKEPDPAELYSDIL 363 +PDP +Y ++ Sbjct: 316 APDPDPKSIYDFVM 329 >gi|260170913|ref|ZP_05757325.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. D2] gi|315919243|ref|ZP_07915483.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. D2] gi|313693118|gb|EFS29953.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. D2] Length = 678 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 81/314 (25%), Positives = 141/314 (44%), Gaps = 9/314 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 Y LM L R +EKA + + G + + + + T G D + YR+ Sbjct: 19 YHLMTLGRALDEKAPSYLLQSLGWSYHAPYAGHDGIQLAVGQVFTLGEDFLFPYYRDMLT 78 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 +L+ G+ A +++ L G G GG S H + G G+A Sbjct: 79 VLSAGMTAEEVI--LNGISKATDPGSGGRHMSNHFAKPEWHIENISSATGTHDLHAAGVA 136 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A Y + + G+ A ++G VYE+ N A+L L VI+VI++N Y + S +A Sbjct: 137 RAMVYYGHKGVAITSHGESATSEGFVYEAINGASLERLPVIFVIQDNGYGISVPKSEQTA 196 Query: 232 QTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 ++ F N+ + +G D+ M +A Y + + P+I++ R HS S Sbjct: 197 NRKVAENFSGFKNLKIIYCNGKDVFDSMNAMTEAREYAISTRNPVIVQANCVRIGSHSNS 256 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D YR E+ E + DP+ + R+ LL K +E +L++IE + +K ++ + A + Sbjct: 257 DKHTLYRDENEL-EYVKDADPLMKFRRMLLRYKRLTEEELQQIEADAKKELSAANRKALA 315 Query: 350 DKEPDPAELYSDIL 363 +PDP +Y ++ Sbjct: 316 APDPDPKSIYDFVM 329 >gi|239939776|ref|ZP_04691713.1| pyruvate dehydrogenase (acetyl-transferring) [Streptomyces roseosporus NRRL 15998] Length = 302 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/294 (27%), Positives = 132/294 (44%), Gaps = 27/294 (9%) Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 S R ML+ R +E+A QL G + + C GQEA VG +++ + +YREH Sbjct: 18 SILRHMLIARGVDEEARQLQKQGALDLWLS-CQGQEAAQVGSAIAVGPEATIFPSYREHA 76 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG----FYGGHGIVGAQVSLGTG 169 L GV +++A+ GR F N F+ + AQ G G Sbjct: 77 VALTRGVTGDELLAQWAGR-------------TFCGWNPQDRRFFPYTLVFAAQTLHGVG 123 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 + + + D + VV GDGA ++G + E+ N+AA+ + +V+++ +NN G ++S+ Sbjct: 124 YSIGRRLQGLDDLVVVYVGDGATSEGDMSEAMNLAAVESASVLFICQNN----GWAISKP 179 Query: 230 SAQ---TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +A+ T + R F I + G D V +A + R + P +IE+ R G Sbjct: 180 AAEQMLTTVADRARGFGIESALIPGDDPELVHRECVRAADHIRNRRSPYLIEIQVGRIHG 239 Query: 287 HSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 HS SD YR ++I + DP+ RL + L +E VR I Sbjct: 240 HSTSDAQEVYRGEDDIARA-TAADPVVAYTGRLTEQGVVDDEWLLCVESEVRDI 292 >gi|156743006|ref|YP_001433135.1| pyruvate dehydrogenase [Roseiflexus castenholzii DSM 13941] gi|156234334|gb|ABU59117.1| Pyruvate dehydrogenase (acetyl-transferring) [Roseiflexus castenholzii DSM 13941] Length = 333 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 8/296 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 ++++ ++ R M+ R +++ L G F G EA +G ++ G D + Sbjct: 14 LSRQRLIAGLRTMIASRETDDRLWLLNRQGR-AHFVVTAAGHEATQLGCAWAIRVGHDYV 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 I YR+ ++A G ++ R+ S G G M H S + G VG+ Sbjct: 73 IPYYRDMTLVMALGQSVLDVLLHAMARRDDPSSG-GRQMFGHYSSRRLRIVSGSSSVGSH 131 Query: 164 VSLGTGIAFANKYRRSDKICVV-CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + G+ A + R I V+ FG+GA +G +E IA + L V++V +NNQY++ Sbjct: 132 LVHAAGLGLAFRARGEQDIAVMGLFGEGATAEGAWHEGLTIAGIHQLPVVFVCQNNQYSI 191 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 V R + + + + + G+ VDG D+ AV +A+ R GP ++E TY Sbjct: 192 SVPVHREVPVPDVAMKAAGYGMQGVVVDGNDVFAVYEAAHQAMERARNGGGPTLLECKTY 251 Query: 283 RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 R+R HS + D YR+ EE+ R+ DPI++ L+ + + +++ + VR Sbjct: 252 RFRPHSSADDDRKYRSAEEVESWRAR-DPIKRFEHYLVEHGIITSEEIEALRREVR 306 >gi|153807994|ref|ZP_01960662.1| hypothetical protein BACCAC_02280 [Bacteroides caccae ATCC 43185] gi|149129603|gb|EDM20817.1| hypothetical protein BACCAC_02280 [Bacteroides caccae ATCC 43185] Length = 677 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 9/314 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 Y LM L R +EKA + + G + + + + T G D + YR+ Sbjct: 18 YHLMTLGRALDEKAPSYLLQSLGWSYHAPYAGHDGIQLAIGQVFTLGEDFLFPYYRDMLT 77 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 +L+ G+ A +I+ L G G GG S H + G G+A Sbjct: 78 VLSAGMTAEEII--LNGISKATDPGSGGRHMSNHFAKPEWHIENISSATGTHDLHAAGVA 135 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A Y + + G+ A ++G VYE+ N A+L L VI+VI++N Y + S +A Sbjct: 136 RAMVYYGHKGVAITSHGESATSEGFVYEAINGASLERLPVIFVIQDNGYGISVPKSEQTA 195 Query: 232 QTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 ++ F N+ + +G D+ M +A Y + P+I++ R HS S Sbjct: 196 NRKVAENFSGFKNLKIIYCNGKDVFDSMNAMTEAREYAITTRNPVIVQANCVRIGSHSNS 255 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D YR E+ E DP+ + R+ LL K +E +L +IE + +K ++ + A S Sbjct: 256 DKHTLYRDENEL-EYVKEADPLMKFRRMLLRYKRLTEEELLQIETDAKKELSAANRKALS 314 Query: 350 DKEPDPAELYSDIL 363 +PDP +Y ++ Sbjct: 315 APDPDPKSIYDFVI 328 >gi|260777497|ref|ZP_05886391.1| branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit [Vibrio coralliilyticus ATCC BAA-450] gi|260607163|gb|EEX33437.1| branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit [Vibrio coralliilyticus ATCC BAA-450] Length = 364 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 74/267 (27%), Positives = 127/267 (47%), Gaps = 9/267 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y M++ R ++ KA L G +G + HL G EA + + +L D + YR+ Sbjct: 35 YCDMVVARTYDNKAVALQRTGKLGTYPSHL--GAEAFGIAIGHALRVQDVFVPYYRDMPA 92 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + G+ K + G + G S H+ F + Q + G+A A Sbjct: 93 MWVRGIGMEKNLQYWGGDERGSDFCPEDS-HISCRDLPFCVP---IATQCTHAVGVAAAL 148 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + +V GDGA ++G ES N A WN+ +++V+ NNQ+A+ + A Sbjct: 149 KIDGNHNAALVTCGDGATSKGDFLESINCAGAWNIPLVFVVNNNQWAISVPRALQCAADF 208 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S++ IPG+ VDG D+ A+ + A+ R KG +IE ++YR H+ +D A+ Sbjct: 209 LSEKAKGAGIPGITVDGNDVVAMFDAVATALDRARKGKGATLIEAVSYRLSDHTTADDAS 268 Query: 295 -YRTREEINEMRSNHDPIEQVRKRLLH 320 YR+ +E+N+ +PI +++ L+ Sbjct: 269 RYRSTDELNQAW-QFEPILRLKNYLIQ 294 >gi|71420819|ref|XP_811624.1| 2-oxoisovalerate dehydrogenase alpha subunit [Trypanosoma cruzi strain CL Brener] gi|70876306|gb|EAN89773.1| 2-oxoisovalerate dehydrogenase alpha subunit, putative [Trypanosoma cruzi] Length = 431 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 83/291 (28%), Positives = 129/291 (44%), Gaps = 28/291 (9%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA--------ELTG 131 F +G+EA VG +L D++ YRE + G ++A EL G Sbjct: 113 SFYMTSMGEEASAVGTAAALDMRDELFLQYREAAALTYRGYTVKDMVAQCMGTIENELKG 172 Query: 132 RQGGISKG-KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY---RRSD----KIC 183 RQ I G + ++HM S+ V Q+ G + + R +D +IC Sbjct: 173 RQMPIHYGSRALNVHMISSP---------VATQIPHAAGAGYVCRLENERETDPNKKRIC 223 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 G+G+A+QG + N+AA N +++I NN YA+ T S A RG+ + Sbjct: 224 AAFVGEGSASQGDFHAGVNMAATMKSNTLFLIRNNGYAISTPSSSQYAGDGVFARGIGYG 283 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEIN 302 IP +VDG DI AV T+ KA R P+++E L YR HS SD + YR+R+E+ Sbjct: 284 IPCARVDGNDILAVFQTVRKARELIRTTNQPVLVEALLYRSSHHSSSDDSTWYRSRDEVE 343 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + P+ + K L + + + VR+ E + +K P Sbjct: 344 VFSNLFLPVARFEKYLERKLLWTPEQSRSLSQKVRQ--ETLAELHRQEKLP 392 >gi|29345722|ref|NP_809225.1| 2-oxoisovalerate dehydrogenase subunit beta [Bacteroides thetaiotaomicron VPI-5482] gi|253567710|ref|ZP_04845121.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 1_1_6] gi|29337615|gb|AAO75419.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides thetaiotaomicron VPI-5482] gi|251841783|gb|EES69863.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 1_1_6] Length = 678 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 86/315 (27%), Positives = 141/315 (44%), Gaps = 11/315 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI-GQEAVIVGMKMSLTEG-DQMITAYREHG 113 Y LM L R +EKA Y + +G H G + + + + T G D + YR+ Sbjct: 19 YHLMTLGRALDEKAPS-YQLQSLGWSYHAPYAGHDGIQLAVGQVFTLGEDFLFPYYRDML 77 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 +L+ G+ A +I+ L G G GG S H + G G+ Sbjct: 78 TVLSAGMTAEEII--LNGISKATDPGSGGRHMSNHFAKPEWHIENISSATGTHDLHAAGV 135 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A Y + + G+ A ++G VYE+ N A+L L VI+VI++N Y + S + Sbjct: 136 ARAMVYYGHKGVAITSHGESATSEGFVYEAINGASLERLPVIFVIQDNGYGISVPKSEQT 195 Query: 231 AQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 A ++ F N+ + +G D+ M +A Y + + P+I++ R HS Sbjct: 196 ANRKVAENFSGFKNLKIIYCNGKDVFDSMNAMTEAREYAISTRNPVIVQANCVRIGSHSN 255 Query: 290 SDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 SD YR E+ E DP+ + R+ LL K +E +L +IE +K ++ + A Sbjct: 256 SDKHTLYRDENEL-EYVKEADPLMKFRRMLLRYKRLTEEELLQIEAESKKELSAANRKAL 314 Query: 349 SDKEPDPAELYSDIL 363 + EPDP +Y ++ Sbjct: 315 AAPEPDPKSIYDFVM 329 >gi|332827035|gb|EGJ99823.1| hypothetical protein HMPREF9455_00247 [Dysgonomonas gadei ATCC BAA-286] Length = 677 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 86/332 (25%), Positives = 145/332 (43%), Gaps = 19/332 (5%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ +KE Y LM L R +EKA + + G + + + M Sbjct: 1 MKKYDIKTTDKETLKKWYHLMTLGRAIDEKAPAYLLQSLGWSYHAPYAGHDGIQLAMGQV 60 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFY 154 G D M YR+ +L+ G+ A +++ L G GG S H + G Sbjct: 61 FKRGEDFMFPYYRDMLTVLSAGLTAEELI--LNGISKATDPASGGRHMSNHFAKPEWGIQ 118 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 S G A A Y + + GD + ++G VYE+ N A+ L I V Sbjct: 119 NVSSATANHDSQAVGTARAMVYYNHKGVAIASHGDSSTSEGYVYEAINGASKERLPFILV 178 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ------VDGMDIRAVKATMDKAVAYC 268 +++N Y G SV + N R S N G++ +G D+ M +A + Sbjct: 179 VQDNGY--GISVPKKDQTAN---RKASENFKGIKNLRIIYCNGKDVFDSMNAMTEAREFA 233 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 A++ P+I+ R HS SD YR E+ ++ DP+ + R+ LL K +E Sbjct: 234 IANRTPVIVHANCVRIGSHSNSDKHTLYRDENELKYVKEA-DPLMKFRRMLLRYKRFTEE 292 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 +LKEIE N +K ++ + + A + +P+PA ++ Sbjct: 293 ELKEIEANAKKELSAANKKALAAPDPNPASIF 324 >gi|298384623|ref|ZP_06994183.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Bacteroides sp. 1_1_14] gi|298262902|gb|EFI05766.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Bacteroides sp. 1_1_14] Length = 678 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 86/315 (27%), Positives = 141/315 (44%), Gaps = 11/315 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI-GQEAVIVGMKMSLTEG-DQMITAYREHG 113 Y LM L R +EKA Y + +G H G + + + + T G D + YR+ Sbjct: 19 YHLMTLGRALDEKAPS-YQLQSLGWSYHAPYAGHDGIQLAVGQVFTLGEDFLFPYYRDML 77 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 +L+ G+ A +I+ L G G GG S H + G G+ Sbjct: 78 TVLSAGMTAEEII--LNGISKATDPGSGGRHMSNHFAKPEWHIENISSATGTHDLHAAGV 135 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A Y + + G+ A ++G VYE+ N A+L L VI+VI++N Y + S + Sbjct: 136 ARAMVYYGHKGVAITSHGESATSEGFVYEAINGASLERLPVIFVIQDNGYGISVPKSEQT 195 Query: 231 AQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 A ++ F N+ + +G D+ M +A Y + + P+I++ R HS Sbjct: 196 ANRKVAENFSGFKNLKIIYCNGKDVFDSMNAMTEAREYAISTRNPVIVQANCVRIGSHSN 255 Query: 290 SDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 SD YR E+ E DP+ + R+ LL K +E +L +IE +K ++ + A Sbjct: 256 SDKHTLYRDENEL-EYVKEADPLMKFRRMLLRYKRLTEEELLQIEAESKKELSAANRKAL 314 Query: 349 SDKEPDPAELYSDIL 363 + EPDP +Y ++ Sbjct: 315 AAPEPDPKSIYDFVM 329 >gi|68076413|ref|XP_680126.1| branched-chain alpha keto-acid dehydrogenase [Plasmodium berghei strain ANKA] gi|56501010|emb|CAH98441.1| branched-chain alpha keto-acid dehydrogenase, putative [Plasmodium berghei] Length = 429 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 13/277 (4%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI--GQEAVIVGMKMSLTE 101 + F E+ L+ Y+ M+ ++E YG+ G + G+E + G+ +LT Sbjct: 78 TAPFEDEEVLNLYKQMVEFSIWDEI---FYGIQRQGRISFYIVNDGEEGLQYGIGKALTV 134 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI-- 159 D + YRE G +L+ G I+ +L G + +GKG M + TK H I Sbjct: 135 DDHL-CQYRETGILLSRGFTYEDILNQLFGTK--YDEGKGRQMCICYTKKDL-NIHSITT 190 Query: 160 -VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 +G+Q+S G +A K + GDG++++G Y + N +++ +++ +NN Sbjct: 191 PLGSQLSHAAGCGYALKLDNKKAVAATFCGDGSSSEGDFYAAVNFSSVRQSQTMFICKNN 250 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 YA+ TS+ + R +S + ++VDG D+ A K C P+ +E Sbjct: 251 LYAISTSIKDQYRGDGIAPRALSLGVESIRVDGNDLFASYLATKKMRDICVQESKPVFME 310 Query: 279 MLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQV 314 ++YRY HS SD ++ YR +E + PI ++ Sbjct: 311 FMSYRYGHHSTSDDSSLYRPKENDAWKKEGVHPISRL 347 >gi|302344396|ref|YP_003808925.1| dehydrogenase E1 component [Desulfarculus baarsii DSM 2075] gi|301641009|gb|ADK86331.1| dehydrogenase E1 component [Desulfarculus baarsii DSM 2075] Length = 326 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 149/320 (46%), Gaps = 9/320 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E E + Y + R F++ A + G + F H +G EA VG L D + Sbjct: 2 EITNELMIKLYTNLARTRAFDQAAVKWLAGGKLLSFYHPALGGEAPGVGGTTILRPDDVI 61 Query: 106 ITAYREHG--HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 R HG H++ G D MAE GR S G G +H + G YGG G +G+ Sbjct: 62 YPHLRGHGLPHLIGKGADPKTYMAEHCGRI-TGSGGGLGGVHAAYDELGIYGGGGTIGSA 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 L G A K ++ V FGDG++N+G +E+ N+AA+W L +++V ENN A Sbjct: 121 FPLSVGWGVACKKNGRGQVVVCFFGDGSSNRGPFHEAANMAAVWKLPIVWVCENNGIAQY 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + A + + + +PG+ VDG D+ AV + AV R GP ++E T R Sbjct: 181 VPIKDAYPLDDIASLAAGYGMPGVVVDGQDVVAVAEAVGAAVERARQGLGPAMVECKTAR 240 Query: 284 YRGHSMSDPANY----RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 + H + +P N R +EI E+R DP+E + +RL+ S L I+ ++ Sbjct: 241 FGSHGIGNPDNSHGAPRDPKEIEELR-KRDPLEIMERRLISQGVLSAEGLAAIKQAAQQE 299 Query: 340 INNSVEFAQSDKEP-DPAEL 358 + + +F P DPA L Sbjct: 300 VAETEKFIDESPFPDDPAML 319 >gi|312961843|ref|ZP_07776341.1| 2-oxoisovalerate dehydrogenase alpha subunit [Pseudomonas fluorescens WH6] gi|311284102|gb|EFQ62685.1| 2-oxoisovalerate dehydrogenase alpha subunit [Pseudomonas fluorescens WH6] Length = 411 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 85/297 (28%), Positives = 136/297 (45%), Gaps = 18/297 (6%) Query: 37 PFLEGFEVSEFNKEQELSAYRLMLLIRRFEEK---AGQLYGMGMVGGFCHLCIGQEAVIV 93 P+ EG V K R ML R F+ + A + M F +G+EA+ Sbjct: 68 PWAEGVPVDILRK-----GMRAMLKTRIFDNRMVVAQRQKKMS----FYMQSLGEEAIGS 118 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-G 152 ++L D YR+ ++A V ++ +L + KG+ + M+S K+ G Sbjct: 119 AQALALNIDDMCFPTYRQQSILMARDVPLVDLICQLLSNERDPLKGRQLPI-MYSVKDAG 177 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F+ G + Q G G A+ + KI GDGA + + + A ++ VI Sbjct: 178 FFTISGNLATQFVQGVGWGMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAPVI 237 Query: 213 YVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 + NNQ+A+ T + A + T F+ RGV I ++VDG D AV A A R + Sbjct: 238 LNVVNNQWAISTFQAIAGGEATTFAGRGVGCGIASLRVDGNDFIAVYAASAWAAERARRN 297 Query: 272 KGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLH-NKWASE 326 GP +IE +TYR HS S DP+ YR ++ + DPI ++++ L+ +W+ E Sbjct: 298 LGPTLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLG-DPIARLKQHLIRIGQWSEE 353 >gi|47212935|emb|CAF92612.1| unnamed protein product [Tetraodon nigroviridis] Length = 491 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 46/94 (48%), Positives = 58/94 (61%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E +E +EQ L YR M IRR E KA QLY ++ GFCHL GQEA G++ ++T Sbjct: 14 EKAELTREQGLQYYRTMQTIRRMELKADQLYKQKIIRGFCHLYDGQEACAAGIEAAITPS 73 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGI 136 D +ITAYR HG+ GV +I+AELTG GG Sbjct: 74 DHLITAYRAHGYTFTRGVSVKEILAELTGETGGT 107 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 45/72 (62%) Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 +YRTR+EI E+RS DPI ++ R+L N AS + KEI++++RK + + +F SD E Sbjct: 400 CSYRTRDEIQEVRSKSDPISMLKDRMLGNNMASVEEFKEIDISIRKEVEEAAQFCTSDPE 459 Query: 353 PDPAELYSDILI 364 P +L + I Sbjct: 460 PPLEDLCNHIFC 471 >gi|326433153|gb|EGD78723.1| hypothetical protein PTSG_11771 [Salpingoeca sp. ATCC 50818] Length = 387 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 5/231 (2%) Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAA 192 G +KG +H S K F+ +G Q+ +G A+A K + + CV+C FG+GAA Sbjct: 127 GACAKGYM-PVHYGSHKLNFHTISSPLGTQIPQASGAAYALKAKGKEN-CVICYFGEGAA 184 Query: 193 NQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 ++G + FN AA + VI+ NN YA+ T R + + ++VDG Sbjct: 185 SEGDAHAGFNFAATLDCPVIFFCRNNGYAISTPTHDQYRGDGIVSRAAGYGMDCIRVDGN 244 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPI 311 D+ AV A A+K P+++E +TYR HS SD + YR EE++ + + PI Sbjct: 245 DVFAVYLATKAAREATIANKRPVLVEAMTYRIGHHSTSDDSTTYRGAEEVSSFQQD-TPI 303 Query: 312 EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 E+++K L + + K ++ + K + + A+ K+P + ++ D+ Sbjct: 304 ERLQKYLRNQNLWDDDKEKALQEEIYKEVRQAFAAAEKKKKPSLSHMFEDV 354 >gi|332884328|gb|EGK04596.1| hypothetical protein HMPREF9456_00923 [Dysgonomonas mossii DSM 22836] Length = 676 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 84/335 (25%), Positives = 150/335 (44%), Gaps = 17/335 (5%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ +KE Y LM L R +EKA + + G + + + + Sbjct: 1 MKKYDIKTTDKETLKKWYHLMTLGRAIDEKAPAYLLQSLGWSYHAPYAGHDGIQLAVGQV 60 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFY 154 T+G D M YR+ +L+ G+ A +++ L G GG S H + Sbjct: 61 FTKGEDFMFPYYRDMLTVLSAGLTAEELI--LNGISKATDPASGGRHMSNHFAKPEWNIE 118 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G+A A KY + + G+ A ++G V+E+ N A+ L VI+V Sbjct: 119 NVSSATGNHDLHAVGVARAIKYYEKKGVAITSHGESAMSEGYVFEAINGASKEELPVIFV 178 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVS-----FNIPGMQVDGMDIRAVKATMDKAVAYCR 269 I++N Y G SV + N ++ V N+ M +G D+ M +A Y Sbjct: 179 IQDNGY--GISVPKKDQTAN--RKAVDNYSGIKNLKIMYCNGKDVFDSMNAMAEAREYAI 234 Query: 270 AHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 A++ P+++ R HS SD YR E+ ++ DP+ + R+ LL K +E + Sbjct: 235 ANQKPVLMHANCVRIGSHSNSDKHTLYRDENELKYVKEA-DPLHKFRRMLLRYKRFTEEE 293 Query: 329 LKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 L+ IE V+K ++ + + A + +PDP ++ ++ Sbjct: 294 LQAIEAEVKKEVSAANKKALAAPDPDPKSIFDFVI 328 >gi|289641199|ref|ZP_06473366.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Frankia symbiont of Datisca glomerata] gi|289508961|gb|EFD29893.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Frankia symbiont of Datisca glomerata] Length = 518 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 85/296 (28%), Positives = 130/296 (43%), Gaps = 53/296 (17%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M++ RR +E++ L G +G + L GQEA VG +L D + YREH Sbjct: 78 RDMVIARRLDEESTALQRQGELGLWASL-RGQEAAQVGSARALRTDDMVFPTYREHAVAW 136 Query: 117 ACGVDASKIMAELTG-RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA-N 174 GVD ++ G GG ++GF +VG+QV TG A Sbjct: 137 CRGVDPLDVLGLFRGVAHGGWD----------VDEHGFQTYAIVVGSQVLHATGYAMGVT 186 Query: 175 KYRRS--------------------------------DKI--CVVCFGDGAANQGQVYES 200 K R+ D + +V FGDGA++QG V E+ Sbjct: 187 KEARTGLGRRPVGTAHRPATDSTGGTAGDSDGTAGDGDDLPATLVYFGDGASSQGDVNEA 246 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRAS-AQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 FN A ++ V++ +NNQ+A+ R + F RG F I G++VDG D+ A A Sbjct: 247 FNWAGVFEAPVVFFCQNNQWAISEPTRRQTRVPIYFRARG--FGIAGVRVDGNDVLATLA 304 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQV 314 A+ R + P ++E +TYR H+ + DP+ YR E+ DP++++ Sbjct: 305 VTRWALHQARQGR-PALVEAVTYRMGAHTTADDPSRYRQASELARW-GALDPVQRM 358 >gi|229591396|ref|YP_002873515.1| 2-oxoisovalerate dehydrogenase subunit alpha [Pseudomonas fluorescens SBW25] gi|229363262|emb|CAY50355.1| 2-oxoisovalerate dehydrogenase alpha subunit [Pseudomonas fluorescens SBW25] Length = 411 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 84/297 (28%), Positives = 136/297 (45%), Gaps = 18/297 (6%) Query: 37 PFLEGFEVSEFNKEQELSAYRLMLLIRRFEEK---AGQLYGMGMVGGFCHLCIGQEAVIV 93 P+ +G V K R ML R F+ + A + M F +G+EA+ Sbjct: 68 PWADGVPVEILRK-----GMRAMLKTRIFDNRMVVAQRQKKMS----FYMQSLGEEAIGS 118 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-G 152 ++L D YR+ ++A V ++ +L + KG+ + M+S K+ G Sbjct: 119 AQALALNIDDMCFPTYRQQSILMARDVPLVDLICQLLSNERDPLKGRQLPI-MYSVKDAG 177 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F+ G + Q G G A+ + KI GDGA + + + A ++ VI Sbjct: 178 FFTISGNLATQFVQGVGWGMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAPVI 237 Query: 213 YVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 + NNQ+A+ T + A + T F+ RGV I ++VDG D AV A A R + Sbjct: 238 LNVVNNQWAISTFQAIAGGEATTFAGRGVGCGIASLRVDGNDFIAVYAASAWAAERARRN 297 Query: 272 KGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLH-NKWASE 326 GP +IE +TYR HS S DP+ YR ++ + DPI ++++ L+ +W+ E Sbjct: 298 LGPTLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLG-DPIARLKQHLIKIGQWSEE 353 >gi|153837566|ref|ZP_01990233.1| pyruvate dehydrogenase E1 component, alpha subunit [Vibrio parahaemolyticus AQ3810] gi|149749063|gb|EDM59874.1| pyruvate dehydrogenase E1 component, alpha subunit [Vibrio parahaemolyticus AQ3810] Length = 363 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 18/296 (6%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGF-CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR M+L R +++KA L G +G + HL G EA+ + + +L D + YR+ Sbjct: 35 YRDMVLTRTYDQKAVALQRTGKLGTYPSHL--GSEAIGIAVGRALKTDDVFVPYYRDMPA 92 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + G+ K + G + G GS + S F + Q + G+A A Sbjct: 93 MWCRGIGMEKNLQYWGGDERGSDFAPEGS-PIPSRDLPFCVP---IATQCTHAVGVASAL 148 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + + + +V GDG ++G ES N A WN+ +++V+ NNQ+A+ S A Sbjct: 149 KIQGNHEAALVMCGDGGTSKGDFLESINCAGTWNIPLVFVVNNNQWAISVPRSLQCAAEF 208 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S++ ++ VDG D+ A+ A+ R KG +IE ++YR H+ +D A Sbjct: 209 LSEKQKRWHSRDT-VDGNDVVAMYDATMTALERARKGKGATLIEAVSYRLSDHTTADDAT 267 Query: 295 -YRTREEINEMRSNHDPIEQVRKRLLHN-KWASE------GDLKE-IEMNVRKIIN 341 YR +++ + +P+ +++ L++ W+ E D KE +E+ V + +N Sbjct: 268 RYRNADDV-QTAWQFEPVSRLKTFLINQGAWSDEQEQQWQSDCKEQVELAVERYLN 322 >gi|160883681|ref|ZP_02064684.1| hypothetical protein BACOVA_01653 [Bacteroides ovatus ATCC 8483] gi|156110766|gb|EDO12511.1| hypothetical protein BACOVA_01653 [Bacteroides ovatus ATCC 8483] Length = 657 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 79/311 (25%), Positives = 139/311 (44%), Gaps = 9/311 (2%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILA 117 M L R +EKA + + G + + + + T G D + YR+ +L+ Sbjct: 1 MTLGRALDEKAPSYLLQSLGWSYHAPYAGHDGIQLAVGQVFTLGEDFLFPYYRDMLTVLS 60 Query: 118 CGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ A +++ L G G GG S H + G G+A A Sbjct: 61 AGMTAEEVI--LNGISKATDPGSGGRHMSNHFAKPEWHIENISSATGTHDLHAAGVARAM 118 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 Y + + G+ A ++G VYE+ N A+L L VI+VI++N Y + S +A Sbjct: 119 VYYGHKGVAITSHGESATSEGFVYEAINGASLERLPVIFVIQDNGYGISVPKSEQTANRK 178 Query: 235 FSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 ++ F N+ + +G D+ M +A Y + + P+I++ R HS SD Sbjct: 179 VAENFSGFKNLKIIYCNGKDVFDSMNAMTEAREYAISTRNPVIVQANCVRIGSHSNSDKH 238 Query: 294 N-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 YR E+ E + DP+ + R+ LL K +E +L++IE + +K ++ + A + + Sbjct: 239 TLYRDENEL-EYVKDADPLMKFRRMLLRYKRLTEEELQQIETDAKKELSAANRKALAAPD 297 Query: 353 PDPAELYSDIL 363 PDP +Y ++ Sbjct: 298 PDPKSIYDFVM 308 >gi|322830488|gb|EFZ33494.1| 2-oxoisovalerate dehydrogenase alpha subunit, putative [Trypanosoma cruzi] Length = 422 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 84/291 (28%), Positives = 129/291 (44%), Gaps = 28/291 (9%) Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA--------ELTG 131 F +G+EA VG +L D++ YRE + G ++A EL G Sbjct: 104 SFYMTSMGEEAAAVGTAAALDMRDELFLQYREAAALTYRGYTVKDVVAQCMGTIENELKG 163 Query: 132 RQGGISKG-KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY---RRSD----KIC 183 RQ I G + ++HM S+ V Q+ G + + R +D +IC Sbjct: 164 RQMPIHYGSRALNVHMISSP---------VATQIPHAAGAGYVCRLENERETDPNKKRIC 214 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 G+G+A+QG + N+AA N +++I NN YA+ T S A RG+ + Sbjct: 215 AAFVGEGSASQGDFHAGVNMAATMKSNTLFLIRNNGYAISTPSSSQYAGDGIFARGIGYG 274 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEIN 302 IP +VDG DI AV T+ KA R P+++E L YR HS SD + YR+REE+ Sbjct: 275 IPCARVDGNDILAVFQTVRKAREIIRTTNQPVLVEALVYRSSHHSSSDDSTWYRSREEVE 334 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + P+ + K L + + + VR+ E + +K P Sbjct: 335 VFSNLFLPVARFEKYLERKSLWTPEQSRSLSQKVRQ--ETLAELHRQEKLP 383 >gi|77459685|ref|YP_349192.1| branched-chain alpha-keto acid dehydrogenase E1 component [Pseudomonas fluorescens Pf0-1] gi|77383688|gb|ABA75201.1| 2-oxoisovalerate dehydrogenase alpha subunit [Pseudomonas fluorescens Pf0-1] Length = 411 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 6/250 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F +G+EA+ ++L D YR+ ++A V ++ +L + KG+ Sbjct: 106 FYMQSLGEEAIGSAQALALNIDDMCFPTYRQQSILMARDVPLVDLICQLLSNERDPLKGR 165 Query: 141 GGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + M+S K+ GF+ G + Q G G A+ + KI GDGA + + Sbjct: 166 QLPI-MYSVKDAGFFTISGNLATQFIQGVGWGMASAIKGDTKIASAWIGDGATAESDFHT 224 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVK 258 + A ++ VI + NNQ+A+ T + A + T F+ RGV I ++VDG D AV Sbjct: 225 ALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEATTFAGRGVGCGIASLRVDGNDFYAVY 284 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKR 317 A A R + GP +IE +TYR HS S DP+ YR ++ + DPI ++++ Sbjct: 285 AASAWAAERARRNLGPTMIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLG-DPIARLKQH 343 Query: 318 LLH-NKWASE 326 L+ W+ E Sbjct: 344 LIKVGHWSEE 353 >gi|145485785|ref|XP_001428900.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124395989|emb|CAK61502.1| unnamed protein product [Paramecium tetraurelia] Length = 406 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 149/332 (44%), Gaps = 10/332 (3%) Query: 39 LEGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG--GFCHLCIGQEAVIVGM 95 LEG ++ E+N + + ++ L+ EE LY G F G+ A VG Sbjct: 42 LEGNLIAKEYNNIPKETLNQIFDLMISIEEMDNLLYMSQRQGKISFYMTSFGETATTVGT 101 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 +L D + YRE G + G +I+ + G KG+ +H S Sbjct: 102 TAALQPQDFIFPQYREQGSFMWRGFTIEQIVNQCIGNHLDGGKGRQMPVHYGSKDLNIVT 161 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + QV +G + + +KI FG+GAA++G + + N A +++ Sbjct: 162 VSSPLTTQVPQASGAGYGFRVNGENKIAATWFGEGAASEGDFHSAMNFAQTLKCQTLFLC 221 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 NN YA+ T + + ++ + +++DG D+ AV + A +K P Sbjct: 222 RNNHYAISTPTDDQFRGDTIAGKAPAYGMRTLKIDGNDLLAVYNGVKYAREQIIKNKEPF 281 Query: 276 IIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQ----VRKRLLHNKWASEGDLK 330 IE +TYR HS SD + YR++EEI+ +S ++PI + ++K+ L ++ + D Sbjct: 282 FIEFITYRIGDHSTSDHSVLYRSQEEIDSWKSGNNPINRLGLFLKKQGLR-QFNDDHD-N 339 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +I +VR + +++ + P +L++D+ Sbjct: 340 QIRKDVRNRVIAALKHGSEQQSPSIQDLFTDV 371 >gi|312196561|ref|YP_004016622.1| pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EuI1c] gi|311227897|gb|ADP80752.1| Pyruvate dehydrogenase (acetyl-transferring) [Frankia sp. EuI1c] Length = 440 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/186 (34%), Positives = 93/186 (50%), Gaps = 11/186 (5%) Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 +V GDGA +QG E+F AA + V++ NNQ+A+ T SR S + + R F Sbjct: 240 VLVYLGDGAMSQGDANEAFVWAASFAAPVVFFCTNNQWAISTPASRQS-RVPLADRANGF 298 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEI 301 PG++VDG D+ AV + A+ R GP +IE TYR H+ S DPA YR E+ Sbjct: 299 GFPGVRVDGNDVVAVHSVTSWALERARRGDGPTLIEAYTYRMGPHTTSDDPARYRPAEQE 358 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD---KEPDPAEL 358 R+ DPI++V RLL AS+ D + +V ++ EP P Sbjct: 359 AVWRA-RDPIDRV-ARLL----ASDHDDAWFAAQRAEAEQAAVRLREAVLALPEPRPDAF 412 Query: 359 YSDILI 364 + D+L+ Sbjct: 413 FDDVLV 418 >gi|212693880|ref|ZP_03302008.1| hypothetical protein BACDOR_03402 [Bacteroides dorei DSM 17855] gi|237723977|ref|ZP_04554458.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. D4] gi|265751334|ref|ZP_06087397.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 3_1_33FAA] gi|212663412|gb|EEB23986.1| hypothetical protein BACDOR_03402 [Bacteroides dorei DSM 17855] gi|229437641|gb|EEO47718.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides dorei 5_1_36/D4] gi|263238230|gb|EEZ23680.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 3_1_33FAA] Length = 677 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 77/331 (23%), Positives = 145/331 (43%), Gaps = 9/331 (2%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ + E Y LM+L R +EKA + + G + + + + Sbjct: 1 MKKYDIKTTDTETLKKWYHLMVLGRALDEKAPSYLLQSLGWSYHAPYAGHDGIQLAVGQV 60 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFY 154 T+G D + YR+ +L+ G+ +++ L G G GG S H + Sbjct: 61 FTKGEDFLFPYYRDMLTVLSAGMSVEELI--LNGISKATDPGSGGRHMSNHFAKPEWHIE 118 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G+A A Y + + G+ A+++G VYE+ N A+ L VI+V Sbjct: 119 NVSSATGTHDLHAAGVARAMVYYGHKGVAITSHGESASSEGYVYEAINGASREGLPVIFV 178 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 ++N Y + + ++ F N+ + +G D+ M +A + AH+ Sbjct: 179 WQDNGYGISVPKKDQTVARKYADNFSGFKNLKIIHCNGKDVFDSMNAMSEAREFAIAHRT 238 Query: 274 PIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P+I+ R HS SD YR E+ ++ DP+ + R+ LL K +E +L++I Sbjct: 239 PVIVHANCVRIGSHSNSDKQTLYRDENELAYVKEA-DPLMKFRRMLLRYKRLTEEELQQI 297 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 E +K ++ + A + +PDP ++ +L Sbjct: 298 EAAAKKELSVANRKALAAPDPDPKSIFDYVL 328 >gi|325115937|emb|CBZ51491.1| hypothetical protein NCLIV_012850 [Neospora caninum Liverpool] Length = 335 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 1/249 (0%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 L G F+ ++ + R+M+ ++ + G + F G+EA +VG Sbjct: 44 LLRGSSSLPFSLDEAVRMMRVMIQSEVYDSTFYDIQRQGRIS-FYMTSFGEEASLVGSAA 102 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 +L + D ++ YRE ++ G+ I+A+L KG+ +H +T Sbjct: 103 ALQKDDLVLPQYRELPALMWRGLTLDDILAQLFATTKDPGKGRQMPVHYAATHVNMMPVC 162 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + ++ G G+ + K ++ D + V FG+GAA +G FN AA +++ N Sbjct: 163 SPLAVKIPQGAGVGYVYKLQKKDAVAAVYFGEGAACEGDASVGFNFAATLGSQTLFLCRN 222 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N YA+ T V R V+F I ++VDG D+ AV A + A + + P + Sbjct: 223 NAYAISTPVEEQYKGDGVGARAVAFGIDTIRVDGTDLVAVYAAVKAAREFVVSQHKPAFV 282 Query: 278 EMLTYRYRG 286 EM+TYR G Sbjct: 283 EMMTYRAGG 291 >gi|237708505|ref|ZP_04538986.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 9_1_42FAA] gi|229457434|gb|EEO63155.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 9_1_42FAA] Length = 677 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 77/331 (23%), Positives = 145/331 (43%), Gaps = 9/331 (2%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ + E Y LM+L R +EKA + + G + + + + Sbjct: 1 MKKYDIKTTDTETLKKWYHLMVLGRALDEKAPSYLLQSLGWSYHAPYAGHDGIQLAVGQV 60 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFY 154 T+G D + YR+ +L+ G+ +++ L G G GG S H + Sbjct: 61 FTKGEDFLFPYYRDMLTVLSAGMSVEELI--LNGISKATDPGSGGRHMSNHFAKPEWHIE 118 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G+A A Y + + G+ A+++G VYE+ N A+ L VI+V Sbjct: 119 NVSSATGTHDLHAAGVARAMVYYGHKGVAITSHGESASSEGYVYEAINGASREGLPVIFV 178 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 ++N Y + + ++ F N+ + +G D+ M +A + AH+ Sbjct: 179 WQDNGYGISVPKKDQTVARKYADNFSGFKNLKIIHCNGKDVFDSMNAMSEAREFAIAHRT 238 Query: 274 PIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P+I+ R HS SD YR E+ ++ DP+ + R+ LL K +E +L++I Sbjct: 239 PVIVHANCVRIGSHSNSDKQTLYRDENELAYVKEA-DPLMKFRRMLLRYKRLTEEELQQI 297 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 E +K ++ + A + +PDP ++ +L Sbjct: 298 ETVAKKELSVANRKALAAPDPDPKSIFDYVL 328 >gi|145523293|ref|XP_001447485.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414996|emb|CAK80088.1| unnamed protein product [Paramecium tetraurelia] Length = 406 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 7/287 (2%) Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 F G+ A VG +L D + YRE G + G +I+ + G KG+ Sbjct: 87 FYMTSFGETATTVGTTAALQPQDFIFPQYREQGSFMWRGFTIEQIVNQCIGNHLDGGKGR 146 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 +H S + QV +G + + +KI FG+GAA++G + + Sbjct: 147 QMPVHYGSKDLNIVTVSSPLTTQVPQASGAGYGFRVNGENKIAATWFGEGAASEGDFHSA 206 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N A +++ NN YA+ T + + ++ + +++DG D+ AV Sbjct: 207 MNFAQTLKCQTLFLCRNNHYAISTPTDDQFRGDTIAGKAPAYGMRTLKIDGNDLLAVYNG 266 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQ----VR 315 + A +K P IE +TYR HS SD + YR++EEI+ +S ++PI + ++ Sbjct: 267 VKYAREQIIKNKEPFFIEFITYRIGDHSTSDHSVLYRSQEEIDSWKSGNNPINRLGLFLK 326 Query: 316 KRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 K+ L ++ + D +I +VR + +++ + P +L++D+ Sbjct: 327 KQGLR-QFNDDHD-NQIRKDVRNRVIAALKHGSEQQSPSIQDLFTDV 371 >gi|15242835|ref|NP_198327.1| dehydrogenase E1 component family protein [Arabidopsis thaliana] gi|332006524|gb|AED93907.1| 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [Arabidopsis thaliana] Length = 365 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 94/182 (51%), Gaps = 2/182 (1%) Query: 183 CVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 C V F GDG ++G + N AA+ V+++ NN +A+ T +S +G + Sbjct: 29 CAVTFIGDGGTSEGDFHAGLNFAAVMEAPVVFICRNNGWAISTHISEQFRSDGIVVKGQA 88 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREE 300 + I ++VDG D AV + + A + P++IEM+ YR HS SD + YR +E Sbjct: 89 YGIRSIRVDGNDALAVYSAVCSAREMAVTEQRPVLIEMMIYRVGHHSTSDDSTKYRAADE 148 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 I + + + + + RK + N W SE D ++ N RK + +++ A+ ++ EL++ Sbjct: 149 IQYWKMSRNSVNRFRKSVEDNGWWSEEDESKLRSNARKQLLQAIQAAEKWEKQPLTELFN 208 Query: 361 DI 362 D+ Sbjct: 209 DV 210 >gi|95116519|gb|ABF56172.1| pyruvate dehydrogenase E1 component alpha subunit [Theobroma cacao] Length = 75 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 41/72 (56%), Positives = 53/72 (73%) Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVGAQV LG G+AFA KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Sbjct: 1 IVGAQVPLGCGLAFAQKYSKDENVTFALYGDGAANQGQLFEALNISALWDLPAILVCENN 60 Query: 219 QYAMGTSVSRAS 230 Y MGT+ RA+ Sbjct: 61 HYGMGTAEWRAA 72 >gi|299146287|ref|ZP_07039355.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Bacteroides sp. 3_1_23] gi|298516778|gb|EFI40659.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Bacteroides sp. 3_1_23] Length = 653 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 9/276 (3%) Query: 93 VGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFST 149 VG +L E D + YR+ +L+ G+ A +++ L G G GG S H Sbjct: 33 VGQVFTLGE-DFLFPYYRDMLTVLSAGMTAEEVI--LNGISKATDPGSGGRHMSNHFAKP 89 Query: 150 KNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL 209 + G G+A A Y + + G+ A ++G VYE+ N A+L L Sbjct: 90 EWHIENISSATGTHDLHAAGVARAMVYYGHKGVAITSHGESATSEGFVYEAINGASLERL 149 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYC 268 VI+VI++N Y + S +A ++ F N+ + +G D+ M +A Y Sbjct: 150 PVIFVIQDNGYGISVPKSEQTANRKVAENFSGFKNLKIIYCNGKDVFDSMNAMTEAREYA 209 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 + + P+I++ R HS SD YR E+ E + DP+ + R+ LL K +E Sbjct: 210 ISTRNPVIVQANCVRIGSHSNSDKHTLYRDENEL-EYVKDADPLMKFRRMLLRYKRLTEE 268 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +L++IE + +K ++ + A + +PDP +Y ++ Sbjct: 269 ELQQIEADAKKELSAANRKALAAPDPDPKSIYDFVM 304 >gi|317474904|ref|ZP_07934173.1| transketolase domain-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|316908807|gb|EFV30492.1| transketolase domain-containing protein [Bacteroides eggerthii 1_2_48FAA] Length = 681 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 9/331 (2%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ + E Y LM L R +EKA + + G + + + M Sbjct: 4 MKKYDIKTTDTETLKKWYYLMTLGRALDEKAPAYLLQSLGWSYHAPYAGHDGIQLAMGQV 63 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFY 154 T+G D + YR+ +L+ G+ +++ L G G GG S H + Sbjct: 64 FTQGEDFLFPYYRDMLTVLSAGMTPEELI--LNGISKATDPGSGGRHMSNHFAKPEWHIE 121 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G+A A Y + + G+ A+++G VYE+ N A+L L VI+V Sbjct: 122 NVSSATGTHDLHAAGVARAMVYYGHKGVVITSHGESASSEGFVYEAVNGASLERLPVIFV 181 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 ++N Y + +A + F N+ + +G D+ M +A Y ++ Sbjct: 182 WQDNGYGISVPKKDQTAARKVADNFSGFKNLKIIHCNGKDVFDSMNAMTEAREYALLNRN 241 Query: 274 PIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P+I+ R HS SD YR E+ +++ DP+ + R+ LL K +E +LK + Sbjct: 242 PVIVHANCVRIGSHSNSDKHTLYRDEGELAYVKAA-DPLMKFRRMLLRYKRFTEEELKAV 300 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 E +K ++ + A + +PDP +++ +L Sbjct: 301 EEKAKKDLSAANRKALAAPDPDPEAIFNYVL 331 >gi|218129122|ref|ZP_03457926.1| hypothetical protein BACEGG_00696 [Bacteroides eggerthii DSM 20697] gi|217988757|gb|EEC55076.1| hypothetical protein BACEGG_00696 [Bacteroides eggerthii DSM 20697] Length = 681 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 9/331 (2%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ + E Y LM L R +EKA + + G + + + M Sbjct: 4 MKKYDIKTTDTETLKKWYYLMTLGRALDEKAPAYLLQSLGWSYHAPYAGHDGIQLAMGQV 63 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFY 154 T+G D + YR+ +L+ G+ +++ L G G GG S H + Sbjct: 64 FTQGEDFLFPYYRDMLTVLSAGMTPEELI--LNGISKATDPGSGGRHMSNHFAKPEWHIE 121 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G+A A Y + + G+ A+++G VYE+ N A+L L VI+V Sbjct: 122 NVSSATGTHDLHAAGVARAMVYYGHKGVVITSHGESASSEGFVYEAVNGASLERLPVIFV 181 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 ++N Y + +A + F N+ + +G D+ M +A Y ++ Sbjct: 182 WQDNGYGISVPKKDQTAARKVADNFSGFKNLKIIHCNGKDVFDSMNAMTEAREYALLNRN 241 Query: 274 PIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P+I+ R HS SD YR E+ +++ DP+ + R+ LL K +E +LK + Sbjct: 242 PVIVHANCVRIGSHSNSDKHTLYRDEGELAYVKAA-DPLMKFRRMLLRYKRFTEEELKAV 300 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 E +K ++ + A + +PDP +++ +L Sbjct: 301 EEKAKKDLSAANRKALAAPDPDPEAIFNYVL 331 >gi|253990152|ref|YP_003041508.1| 3-methyl-2-oxobutanoate dehydrogenase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211639011|emb|CAR67625.1| similar to 3-methyl-2-oxobutanoate dehydrogenase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781602|emb|CAQ84765.1| similar to 3-methyl-2-oxobutanoate dehydrogenase [Photorhabdus asymbiotica] Length = 670 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 10/299 (3%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLL R F+ ++ + G F G E + V + + + D ++ YR+ +LA Sbjct: 36 MLLSREFDNRSAIVTRQGR-AWFHVSAAGHEGLAV-LPQLMEKNDVLVPYYRDRALVLAR 93 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ ++ EL G+ S G+ S H S ++ + + G Q TG A+A+ Sbjct: 94 GMSIVEMTRELMGKATSHSAGRTMSNHFCSKEHNIFSVVSLTGTQCIPATGAAWASVLDN 153 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + + V GD A QG+ YE+ + A L V++V+ +N+ + TS + + + Sbjct: 154 KNGLVVCGVGDAATRQGEFYEAVSFAVERRLPVVFVVSDNKLGISTSTEKMAPY----RL 209 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRT 297 G+ +VD V + R + P I+ R HS SD YRT Sbjct: 210 GIFDECLIRRVDARKPETVFPVAQEVFNKARFERTPCILVCRVDRLDSHSNSDSHKLYRT 269 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 +E+ ++ DPIE L +E +L E + ++ + E + EPDPA Sbjct: 270 PDELETLQ---DPIENYVAYLKEKGALNEQELAEQKEKIKADVAEIFERVYHEAEPDPA 325 >gi|307719652|ref|YP_003875184.1| hypothetical protein STHERM_c19760 [Spirochaeta thermophila DSM 6192] gi|306533377|gb|ADN02911.1| hypothetical protein STHERM_c19760 [Spirochaeta thermophila DSM 6192] Length = 1125 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 88/314 (28%), Positives = 133/314 (42%), Gaps = 23/314 (7%) Query: 53 LSAYRLMLLIR---RFEE---KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 L YR M R R EE K G+ + F G EA V + LTE D + Sbjct: 13 LDLYRYMFSAREIDRLEEDYTKRGEAF-------FTVSGAGHEASAVLAPL-LTEHDWLH 64 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 YR+ +LA G+D ++ L + S G+ S H+ + G VG Sbjct: 65 CHYRDKALMLARGLDPAQFFHSLFTNRESHSAGRQMSAHISAPHLKILSIVGPVGNSALQ 124 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A A + + + GDG QG+V E+ A L V++ IE+N+YA+ T Sbjct: 125 AVGVAKAVRDDEGAPVVLCSLGDGMTQQGEVLEAVAHAVRDRLPVLFFIEDNKYAIST-- 182 Query: 227 SRASAQTNFSKRG----VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 R +T + G + IP VDG D T+ VA R + P I+ Sbjct: 183 -RTEGKTFYELPGGRVDSFYGIPITYVDGTDAVTAYHTLRDVVARMRDDREPRIVVFDVE 241 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R H+ +D + YR +E +R DPI+++R L+ + + SE +L E E R + Sbjct: 242 RLCNHTNADDESIYRPEDERRRVREAADPIKKLRAALIESGF-SEAELLEKEAAWRAELE 300 Query: 342 NSVEFAQSDKEPDP 355 Q +P+P Sbjct: 301 GLAARCQLVPDPEP 314 >gi|329957451|ref|ZP_08297926.1| Transketolase protein [Bacteroides clarus YIT 12056] gi|328522328|gb|EGF49437.1| Transketolase protein [Bacteroides clarus YIT 12056] Length = 678 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 80/331 (24%), Positives = 143/331 (43%), Gaps = 9/331 (2%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ + E Y LM L R +EKA + + G + + + M Sbjct: 1 MKKYDIKTTDAETLKKWYYLMALGRALDEKAPAYLLQSLGWSYHAPYAGHDGIQLAMGQV 60 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFY 154 T+G D + YR+ +L+ G+ +++ L G G GG S H + Sbjct: 61 FTKGEDFLFPYYRDMLTVLSAGMTPEELI--LNGISKATDPGSGGRHMSNHFAKPEWHIE 118 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G+A A Y + + G+ A+++G VYE+ N A+L L VI+V Sbjct: 119 NISSATGTHDLHAAGVARAMVYYGHKGVVITSHGESASSEGFVYEAVNGASLERLPVIFV 178 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 ++N Y + +A + F N+ + +G D+ M +A Y ++ Sbjct: 179 WQDNGYGISVPKKDQTAARKVADNFSGFKNLKIIHCNGKDVFDSMNAMTEAREYALLNRN 238 Query: 274 PIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P+I+ R HS SD YR E+ +++ DP+ + R+ LL K +E DL I Sbjct: 239 PVIVHANCVRIGSHSNSDKHTLYRDEGELTYVKAA-DPLMKFRRMLLRYKRLTEEDLVAI 297 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 E +K ++ + A + +PDP ++ +L Sbjct: 298 EEKAKKDLSAANRKALAAPDPDPKTIFDYVL 328 >gi|15617957|ref|NP_224241.1| (pyruvate) oxoisovalerate dehydrogenase Alpha & Beta fusion [Chlamydophila pneumoniae CWL029] gi|15835570|ref|NP_300094.1| (pyruvate) oxoisovalerate dehydrogenase alpha and beta fusion [Chlamydophila pneumoniae J138] gi|16753012|ref|NP_445285.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Chlamydophila pneumoniae AR39] gi|33241372|ref|NP_876313.1| 2-oxoisovalerate dehydrogenase alpha and beta subunit [Chlamydophila pneumoniae TW-183] gi|4376286|gb|AAD18186.1| (pyruvate) Oxoisovalerate Dehydrogenase Alpha/Beta Fusion [Chlamydophila pneumoniae CWL029] gi|7189659|gb|AAF38548.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Chlamydophila pneumoniae AR39] gi|8978408|dbj|BAA98245.1| (pyruvate) oxoisovalerate dehydrogenase alpha and beta fusion [Chlamydophila pneumoniae J138] gi|33235880|gb|AAP97970.1| 2-oxoisovalerate dehydrogenase alpha and beta subunit [Chlamydophila pneumoniae TW-183] Length = 678 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 81/307 (26%), Positives = 130/307 (42%), Gaps = 14/307 (4%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITA 108 E + ++++LL R+ G G F C G E V SL G D Sbjct: 21 ELRFAEHKMLLLSRQ----------SGSGGTFQLSCAGHELAGVLAGKSLIPGKDWSFPY 70 Query: 109 YREHGHILACGVDASKIMAELTGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+ G + G D S+I A R S + H K +VG Q Sbjct: 71 YRDQGFPIGLGCDLSEIFASFLARTTPNHSSARMMPYHYSHKKLRICCQSSVVGTQFLQA 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A+A K+ +D++ V GDGA +QG+ +E N AL L +I VI+NN +A+ Sbjct: 131 AGRAWAVKHSSADEVVYVSGGDGATSQGEFHEMLNFVALHQLPLITVIQNNHWAISVPFE 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 S + +VDG + ++ T AV R H P +I + R H Sbjct: 191 DQCGADLASLGRCHQGLAVYEVDGGNYTSLTETFSHAVDQARQHSVPALILIDVVRLSSH 250 Query: 288 SMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 S SD YR+ ++ ++ + DP+ + K ++ S +++EI+ ++ + S E Sbjct: 251 SNSDNQEKYRSALDL-KLSMDKDPLILLEKEAINVFGLSPFEIEEIKAEAQEEVRKSCEI 309 Query: 347 AQSDKEP 353 A++ P Sbjct: 310 AEALPFP 316 >gi|269302907|gb|ACZ33007.1| putative dehydrogenase E1 component, alpha and beta subunit [Chlamydophila pneumoniae LPCoLN] Length = 678 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 81/307 (26%), Positives = 130/307 (42%), Gaps = 14/307 (4%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITA 108 E + ++++LL R+ G G F C G E V SL G D Sbjct: 21 ELRFAEHKMLLLSRQ----------SGSGGTFQLSCAGHELAGVLAGKSLIPGKDWSFPY 70 Query: 109 YREHGHILACGVDASKIMAELTGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+ G + G D S+I A R S + H K +VG Q Sbjct: 71 YRDQGFPIGLGCDLSEIFASFLARTTPNHSSARMMPYHYSHKKLRICCQSSVVGTQFLQA 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G A+A K+ +D++ V GDGA +QG+ +E N AL L +I VI+NN +A+ Sbjct: 131 AGRAWAVKHSSADEVVYVSGGDGATSQGEFHEMLNFVALHQLPLITVIQNNHWAISVPFE 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 S + +VDG + ++ T AV R H P +I + R H Sbjct: 191 DQCGADLASLGRCHQGLAVYEVDGGNYTSLTETFSHAVDQARQHSVPALILIDVVRLSSH 250 Query: 288 SMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 S SD YR+ ++ ++ + DP+ + K ++ S +++EI+ ++ + S E Sbjct: 251 SNSDNQEKYRSALDL-KLSMDKDPLILLEKEAINVFGLSPFEIEEIKAEAQEEVRRSCEI 309 Query: 347 AQSDKEP 353 A++ P Sbjct: 310 AEAFPFP 316 >gi|183984752|ref|YP_001853043.1| dehydrogenase [Mycobacterium marinum M] gi|183178078|gb|ACC43188.1| dehydrogenase [Mycobacterium marinum M] Length = 304 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 79/303 (26%), Positives = 129/303 (42%), Gaps = 22/303 (7%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L YR M ++R + ++ G++ +GQEAV +G +LTEGD ++ + R H Sbjct: 16 LEMYRRMWVLRLLDMALEEMRADGLMESPVSTALGQEAVSIGATAALTEGDLVLASRRAH 75 Query: 113 GHILACGVDAS--KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 L GVD ++AEL G+ + S + G L G Sbjct: 76 A--LHVGVDLPLGPMIAELIGQDSTCDHAD----QLNSPERS-----GAADQCPLLAVGH 124 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A++ SD++ + G N G ++ N+A LW+L V+ V+E+ G V+ Sbjct: 125 AYSQWLDNSDRVTLCITGPDDVNSGAFVQAANMAVLWHLPVVIVVES---VPGVGVAGRL 181 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 IP + VDG D++AV+ + AV RA GP ++ +TYR S Sbjct: 182 RGAPGHGGDACQRIPSVTVDGHDVQAVRRCVATAVQRARAGAGPTVVRAITYRS-----S 236 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 D ++ + DP+ RL A L ++E RK++ ++V A+S Sbjct: 237 DFPSFDGDYDAAATEPFLDPLVFTGGRLKAGG-ADAAQLCDVERTARKLVADAVALAKSG 295 Query: 351 KEP 353 P Sbjct: 296 TCP 298 >gi|193214148|ref|YP_001995347.1| dehydrogenase E1 component [Chloroherpeton thalassium ATCC 35110] gi|193087625|gb|ACF12900.1| dehydrogenase E1 component [Chloroherpeton thalassium ATCC 35110] Length = 698 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 85/327 (25%), Positives = 142/327 (43%), Gaps = 13/327 (3%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMI 106 +KEQ L AY + R+ + K L G F G E V M M + G D Sbjct: 30 SKEQILRAYTQIYRTRQLDNKLLILLRQGK-APFHVGAAGHEIAQVAMAMHIKPGQDWSY 88 Query: 107 TAYREHGHILACGVDASKIMAELTGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 YR+ + L G+ ++ E + IS G+ H G+Q Sbjct: 89 PYYRDLAYCLELGMSVEDVVLEFLAKDVSPISGGRQMYGHWSHNDLRIPTQSSPTGSQYL 148 Query: 166 LGTGIAFA----NKYRRS--DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G A A N+ R+ +I V G+GA ++G+ +E+ N A L V+++IE+N Sbjct: 149 HAAGTAIACKRENELRKEGEKEIVFVSSGEGATSEGEFHEALNWATREKLPVVFLIEDNG 208 Query: 220 YAMGTSVSRASAQTNFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 YA+ + + + K ++ + VDG + + A KAV CR GP +I Sbjct: 209 YAISVPIEEQTTGQSIYKVAAGYSGLTRFDVDGGNFFEMYAAAQKAVDICRRGDGPCLIR 268 Query: 279 MLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 R HS SD A YR+++E+ E D + ++ K +L S+ +L ++ + Sbjct: 269 ASVVRLLPHSSSDNQAAYRSQDEL-ESDKKRDGLLRLEKHILTEGVLSQKELTALQAEIY 327 Query: 338 KIINNSVEFAQSDKEPDPAELYSDILI 364 I +V +A ++P P E ++D ++ Sbjct: 328 NKIEAAVTWALKQEDPRP-ESHADFVV 353 >gi|29840089|ref|NP_829195.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Chlamydophila caviae GPIC] gi|29834437|gb|AAP05073.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Chlamydophila caviae GPIC] Length = 678 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 7/268 (2%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHL-CIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 +L+ +R E K L GG L C G E V SL G D YR+ G Sbjct: 17 KLVWTLRFAENKMLLLSRQSDSGGTFQLSCAGHELAGVIAGKSLIPGKDWSFPYYRDQGF 76 Query: 115 ILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 + G D S+I+A R S G+ H K +VG Q G A+A Sbjct: 77 PIGLGCDLSEILASFLARLTPNHSSGRMMPYHYSHKKLRICCQSSVVGTQFLQAAGRAWA 136 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K+ +S+++ V GDG+ +QG+ +E N AL L ++ V++NN +A+ + Sbjct: 137 TKHAKSNEVVYVSGGDGSTSQGEFHEMLNYVALHKLPLVTVVQNNSWAISVPF-KDQCSA 195 Query: 234 NFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 + ++ G S+ + +VDG D + KAV R P +I + R HS SD Sbjct: 196 DLARLGESYRGLSVYEVDGGDYFGLVDVFSKAVDQARHASVPALILINVMRLEPHSNSDN 255 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLL 319 YR+R++++ N+DP+ ++ ++++ Sbjct: 256 HEKYRSRDDLDYCM-NNDPLIRLERQMV 282 >gi|23016865|ref|ZP_00056617.1| COG1071: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Magnetospirillum magnetotacticum MS-1] Length = 311 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 96/198 (48%) Query: 82 CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKG 141 HL +G EA+ V + ++ EGD + +R + +A + ++EL R G++ G+ Sbjct: 39 VHLALGHEAIAVAVGAAMAEGDSLFLTHRNIHYNIARATSLAAEVSELALRPDGLAGGRL 98 Query: 142 GSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF 201 GSM+M + G I+G + + G A A S + V GDGA +G +ES Sbjct: 99 GSMNMSNPGRGLIYTSSILGNDLCVAAGAAMAETVLGSGAVPFVVTGDGALEEGVFFESL 158 Query: 202 NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 +A + ++ V+ENN +++ T + + + +F++P ++ G D+ A + Sbjct: 159 ELARSGDAPLVVVVENNGWSLATRIEERRCPIHVDRVAAAFDLPYGRLSGNDVATYAAEL 218 Query: 262 DKAVAYCRAHKGPIIIEM 279 + A + P+++E+ Sbjct: 219 IRLRGEALARRRPVVVEV 236 >gi|19070783|gb|AAL83994.1| pyruvate dehydrogenase E1 alpha subunit [Oryza sativa] Length = 126 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 47/103 (45%), Positives = 62/103 (60%) Query: 76 GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 G + GF HL GQEAV G L + D +++ YR+H H L+ GV A +MAEL G+ G Sbjct: 3 GKMFGFVHLYNGQEAVSTGFIKLLNQADCVVSTYRDHVHALSKGVPARSVMAELFGKATG 62 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 +G+GGSMHMFS + GG +G + + TG AFA KYR Sbjct: 63 CCRGQGGSMHMFSEPHNLLGGFAFIGEGIPVATGAAFAAKYRH 105 >gi|328462734|gb|EGF34632.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Lactobacillus rhamnosus MTCC 5462] Length = 189 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 89/159 (55%), Gaps = 7/159 (4%) Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 YE N A + ++++++N +A+ + +A +++ V+ +PG+QVDGMD AV Sbjct: 3 YEGVNFAGHFKAPALFIVQDNGFAISVPRASQTAAKTLAQKAVAAGVPGVQVDGMDALAV 62 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVR 315 +A A+ A GP++IE LTYRY H++S DP YR++ E +E+ DP+ ++R Sbjct: 63 YEVTKEARAWAAAGNGPVLIETLTYRYGPHTLSGDDPTRYRSK-ETDELWQKRDPLIRMR 121 Query: 316 KRLLHNK-WASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 L W+ + + IE V+ I +++ ++DK P Sbjct: 122 NYLTDKGLWSKDKEDALIE-KVKDEIKDAIN--KADKAP 157 >gi|154492243|ref|ZP_02031869.1| hypothetical protein PARMER_01877 [Parabacteroides merdae ATCC 43184] gi|154087468|gb|EDN86513.1| hypothetical protein PARMER_01877 [Parabacteroides merdae ATCC 43184] Length = 678 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 83/336 (24%), Positives = 144/336 (42%), Gaps = 19/336 (5%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ + E Y LM L R +EKA + + G + + + + Sbjct: 1 MKRYDIKTTDTETLRKWYYLMSLGRALDEKAPSYLLQSLGWSYHAPYAGHDGIQLAIGQV 60 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFY 154 G D + YR+ +L+ G+ A +I+ L G GG S H + Sbjct: 61 FHRGEDYLFPYYRDMLTVLSAGMTAEEII--LNGISKATDPSSGGRHMSNHFAKPEWHIE 118 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G+A A Y + + G+ A ++G VYE+ N A+ L VI+V Sbjct: 119 NISSATGTHDLHAVGVARAMVYYDHKGVAITSHGESATSEGYVYEAINGASNEQLPVIFV 178 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPG------MQVDGMDIRAVKATMDKAVAYC 268 +++N Y G SV + N R V+ N G + +G D+ M +A + Sbjct: 179 LQDNGY--GISVPKKDQTAN---RKVADNFSGFKNLRIIHCNGKDVFDSMNAMTEAREHA 233 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 P+I+ R HS SD YR E+ +++ DP+++ R+ LL +E Sbjct: 234 INTHNPVIVHANCVRIGSHSNSDKQTLYRDENELAYVKAA-DPLQKFRRMLLRYNRLTEE 292 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +LK+IE +K ++ + A + EPDPA ++ +L Sbjct: 293 ELKQIEAQAKKDLSTANRKAMAAPEPDPATIFDYVL 328 >gi|332666057|ref|YP_004448845.1| 3-methyl-2-oxobutanoate dehydrogenase [Haliscomenobacter hydrossis DSM 1100] gi|332334871|gb|AEE51972.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Haliscomenobacter hydrossis DSM 1100] Length = 693 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 81/325 (24%), Positives = 134/325 (41%), Gaps = 25/325 (7%) Query: 53 LSAYRLMLLIRRFEEKAGQLY--GMGMVGGFCHLCI-GQEAVIVGMKMSLTEGDQMITAY 109 L A+RLM + E LY +V + H G EA+ + + M L D + Y Sbjct: 16 LEAFRLMATAKSMSE----LYEENFKLVSKYVHATSRGHEAIQLALGMQLLPQDYLFPYY 71 Query: 110 REHGHILACGVDASKIMAELTG-RQGGISKGKGGSMHMF---STKNGFYGGHGIVGAQVS 165 R+ +L+ G+ ++M +L R S G+ H K G Q Sbjct: 72 RDDAMLLSIGMRPYELMLQLLAKRDDPFSGGRTYYAHPSLKDPNKPKIPHQSSATGMQAI 131 Query: 166 LGTGIAFANKYRRS---------DKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVI 215 TG+A YR + +K VVC GD + +G+V E+ +A L L ++Y++ Sbjct: 132 PATGVALGFWYREARALTKDYPLEKPIVVCSLGDASMTEGEVSEAMQMAVLKKLPILYLV 191 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ++N + + S + AQ+ + + G D A T+ +A+A R + P Sbjct: 192 QDNGWDISASAAEVRAQSAAEYAAGFKGLETRSIHGNDFFACYETLREAIATMRRERRPF 251 Query: 276 IIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 ++ H+ YR E + +R DP + L+ + ASE L+EI Sbjct: 252 LVHAEVPLLNHHTSGVRKEWYRDDLEGHLLR---DPFPLFWQYLMEDGIASEAQLQEINA 308 Query: 335 NVRKIINNSVEFAQSDKEPDPAELY 359 + + E AQ ++P PA LY Sbjct: 309 RAQAQVKADFEAAQQAEDPSPASLY 333 >gi|315186545|gb|EFU20304.1| Transketolase domain-containing protein [Spirochaeta thermophila DSM 6578] Length = 1127 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 4/271 (1%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G EA V + T D + YR+ +LA G+D+++ L + S G+ S H+ Sbjct: 47 GHEAAAVLAPL-FTAHDWLHCHYRDKALMLARGLDSAQFFHSLFTNRESHSAGRQMSAHI 105 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 + G VG G+A A + + + GDG QG+V E+ A Sbjct: 106 SAPHLKILSIVGPVGNSALQAVGVAKAVRDTEGAPVVLCSLGDGMIQQGEVLEAIAHAVR 165 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAV 265 L V++ IE+N+YA+ T + R SF IP VDG D T+ V Sbjct: 166 DGLPVLFFIEDNKYAISTRTRGKTFYELPEGRVDSFYGIPITYVDGTDAVTAYRTLKDVV 225 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 A R + P I+ R H+ +D + YR EE +R DPI+++R+ L+ N A Sbjct: 226 AGMREDRKPRIVVFDVERLCNHTNADDESVYRPEEERKRVREVADPIKKLRQVLIENGIA 285 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 E +L E RK + Q +P+P Sbjct: 286 EE-ELASREQEWRKELEELAARCQLVSDPEP 315 >gi|89898486|ref|YP_515596.1| oxoisovalerate dehydrogenase alpha-beta fusion [Chlamydophila felis Fe/C-56] gi|89331858|dbj|BAE81451.1| oxoisovalerate dehydrogenase alpha-beta fusion [Chlamydophila felis Fe/C-56] Length = 678 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 83/285 (29%), Positives = 125/285 (43%), Gaps = 13/285 (4%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHL-CIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 +L+ +R E K L GG L C G E V SL G D YR+ G Sbjct: 17 KLVWSLRFAENKMLLLSRQSGSGGTFQLSCAGHELAGVVAGKSLIPGKDWSFPYYRDQGF 76 Query: 115 ILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 + G D S+I A R S G+ H K +VG Q G A+A Sbjct: 77 PIGLGCDLSEIFASFLARLTPNHSSGRMMPYHYSHKKLRICCQSSVVGTQFLQAAGRAWA 136 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS----VSRA 229 K+ S++I V GDG+ +QG+ +E N AL L +I V++NN +A+ S Sbjct: 137 AKHTGSNEIVYVSGGDGSTSQGEFHEMLNYVALHQLPLITVVQNNAWAISVPFIDQCSAD 196 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 A+ RG+S +VDG D + KAV R P ++ + R HS Sbjct: 197 LARLGECYRGLSV----YEVDGGDYIGLVEAFSKAVDQARNASVPALVLINVMRLEPHSN 252 Query: 290 SD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 SD YR+RE+++ N+DP+ ++ + ++ S ++ EI+ Sbjct: 253 SDNHEKYRSREDLDHCL-NNDPLIRLERLMIEEYEISPSEILEIK 296 >gi|218261805|ref|ZP_03476520.1| hypothetical protein PRABACTJOHN_02191 [Parabacteroides johnsonii DSM 18315] gi|218223751|gb|EEC96401.1| hypothetical protein PRABACTJOHN_02191 [Parabacteroides johnsonii DSM 18315] Length = 678 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 82/336 (24%), Positives = 144/336 (42%), Gaps = 19/336 (5%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ + E Y LM L R +EKA + + G + + + + Sbjct: 1 MKRYDIKTTDTETLRKWYYLMSLGRALDEKAPSYLLQSLGWSYHAPYAGHDGIQLAIGQV 60 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFY 154 G D + YR+ +L+ G+ A +++ L G GG S H + Sbjct: 61 FRRGEDYLFPYYRDMLTVLSAGMTAEEVI--LNGISKATDPSSGGRHMSNHFAKPEWHIE 118 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G+A A Y + + G+ A ++G VYE+ N A+ L VI+V Sbjct: 119 NISSATGTHDLHAVGVARAMVYYDHKGVAITSHGESATSEGYVYEAINGASNEQLPVIFV 178 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPG------MQVDGMDIRAVKATMDKAVAYC 268 +++N Y G SV + N R V+ N G + +G D+ M +A + Sbjct: 179 LQDNGY--GISVPKKDQTAN---RKVADNFSGFKNLRIIHCNGKDVFDSMNAMTEAREHA 233 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 P+I+ R HS SD YR E+ +++ DP+++ R+ LL +E Sbjct: 234 INTHNPVIVHANCVRIGSHSNSDKQTLYRDENELAYVKAA-DPLQKFRRMLLRYNRLTED 292 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +LK+IE +K ++ + A + EPDPA ++ +L Sbjct: 293 ELKQIEAQAKKDLSAANRKALAAPEPDPATIFDYVL 328 >gi|301344735|ref|ZP_07225476.1| acetoin:DCPIP oxidoreductase alpha subunit [Acinetobacter baumannii AB056] Length = 159 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 2/159 (1%) Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + L VI+V ENN + GT A + + R F +P ++VDG D AV A+ Sbjct: 1 VLKLPVIFVFENNGFGEGTGHDYAVGSKDIAGRAAGFGLPAVKVDGTDFFAVYEAAQTAI 60 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 R +GP +IE +T R+ GH DP R++EE+ ++ N DP++ R+++ Sbjct: 61 ERARRGEGPSVIETITNRFYGHFEGDPGLIRSKEEVEFIKENKDPLKIFREKV--KGKID 118 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 E L EI+ + ++++V A++ P P +L +D+ + Sbjct: 119 EAKLDEIDAASKANVDDAVAKARAAAYPKPEQLLTDVYV 157 >gi|57209622|emb|CAI41292.1| pyruvate dehydrogenase (lipoamide) alpha 1 [Homo sapiens] Length = 109 Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%) Query: 277 IEMLTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ Sbjct: 1 MELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVE 60 Query: 336 VRKIINNSVEFAQSDKEPDPAEL 358 VRK I ++ +FA +D EP EL Sbjct: 61 VRKEIEDAAQFATADPEPPLEEL 83 >gi|215259851|gb|ACJ64417.1| mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha [Culex tarsalis] Length = 264 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 8/221 (3%) Query: 138 KGKGGSM--HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQ 194 +GKG M H S K F +G Q+ G A+A K +++ V+ FG+GAA++ Sbjct: 3 EGKGRQMPAHYGSKKLNFVTISSPLGTQIPQAVGAAYAFKRLPNNQRAVITYFGEGAASE 62 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G + +FN AA + V+ NN +A+ T + R + I ++ DG DI Sbjct: 63 GDAHAAFNFAATLDCPVMLFCRNNGFAISTPSKEQYRGDGIAGRAAGYGIAALRFDGTDI 122 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQ 313 AV A Y + PI++E + YR HS SD + YR E++ + PI + Sbjct: 123 FAVYNATKMAREYVLKNNKPIVMEAMQYRISHHSTSDDSTAYRPAEDLEIWNTTEHPISK 182 Query: 314 VRKRLLHNKW----ASEGDLKEIEMNVRKIINNSVEFAQSD 350 ++ + W A E ++K + V I+ S + ++D Sbjct: 183 LKAYMKQRGWFDEAAEEANVKAVRKQVLAQISQSEKIPKAD 223 >gi|289756929|ref|ZP_06516307.1| predicted protein [Mycobacterium tuberculosis T85] gi|289712493|gb|EFD76505.1| predicted protein [Mycobacterium tuberculosis T85] Length = 231 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 4/203 (1%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 G+ +V L G A+A R + ++ + D + E+ ++AA+W L V Sbjct: 13 GYRAAIRVVKQSPLLAIGHAYALWLRDTGRVTLCVTQDCDVDADAFNEAADLAAVWQLPV 72 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 + ++EN + A+ + R + + +R V++ +PG+ VDG D+ AV+ + AV RA Sbjct: 73 VILVENIRGALSVHLDRYTHEPRVYRRAVAYGMPGVSVDGNDVEAVRDCVANAVVRARAG 132 Query: 272 KGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 GP +++ +TYR S SD YR ++ DP+ R+RL+ + G L E Sbjct: 133 GGPTLVQAITYRTTDFSGSDRGGYR---DLAGSEQFLDPLIFARRRLIAAG-TTRGRLDE 188 Query: 332 IEMNVRKIINNSVEFAQSDKEPD 354 E + + ++V FA++ P+ Sbjct: 189 QERAACQQVADAVAFAKARARPN 211 >gi|320101971|ref|YP_004177562.1| 3-methyl-2-oxobutanoate dehydrogenase [Isosphaera pallida ATCC 43644] gi|319749253|gb|ADV61013.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Isosphaera pallida ATCC 43644] Length = 367 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 79/324 (24%), Positives = 131/324 (40%), Gaps = 37/324 (11%) Query: 53 LSAYRLMLLIRRFEE------KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG---- 102 + +RLM+L R EE K+GQ Y VGG G+EA V + + + +G Sbjct: 40 FTLHRLMVLGRTLEERMIKLSKSGQAYFW--VGG-----PGEEAFNVCLGLQVKKGRGPA 92 Query: 103 -DQMITAYREHGHILACGVDASKIMAELT-GRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D + YR +LA G+D + ++ R S G+ H ++ Sbjct: 93 FDYLHLHYRNSATLLAMGMDPRDAIRQMIMTRTDPFSMGRNFVGHFARADWNVVPVFSVI 152 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW------NLNVIYV 214 Q + G A K D I +V GD + +G F LW L V+++ Sbjct: 153 ENQYVIAPGTAMIQKRLGGDGISIVTGGDAGSAEG----DFASGLLWATRPRQELPVLFI 208 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 + +N Y + T + + K + IP VDG D+ A + + + YCR +GP Sbjct: 209 VTDNAYGISTLTTSQMDEARPLKMAKAHEIPCELVDGNDVVASWHALQRGIDYCRRERGP 268 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 +++ R GHS S A + + D I + +++ A+E DL ++ Sbjct: 269 YLLQARVSRLHGHSSSSGA--------GRIDTEADCIALLESKMIERGLANEADLDQVHR 320 Query: 335 NVRKIINNSVEFAQSDKEPDPAEL 358 R I +VE + P P ++ Sbjct: 321 ECRDQIERAVEEVLDEARPRPEDV 344 >gi|313675394|ref|YP_004053390.1| transketolase central region [Marivirga tractuosa DSM 4126] gi|312942092|gb|ADR21282.1| Transketolase central region [Marivirga tractuosa DSM 4126] Length = 695 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/285 (25%), Positives = 126/285 (44%), Gaps = 19/285 (6%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCH-LCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 AYRLM +R E + + + H G EA+ + M L D + YR+ Sbjct: 21 AYRLMHTAKRMAEIFDE--NKAIASKYVHSTSRGHEAIQLAASMQLKPIDYLAPYYRDES 78 Query: 114 HILACGVDASKIMAELTGRQGG-ISKGKGGSMHMFSTKNGFYG---GHGIVGAQVSLGTG 169 +L G++ ++M +L ++ S G+ H + G G QV TG Sbjct: 79 ILLGIGMEPYELMLQLMAKKDDPFSGGRSYYNHPSLKREGMPTIPHQSSATGMQVIPATG 138 Query: 170 IAFANKYRRS-------DKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA 221 +A K++ +K VVC GDG+ +G+V E+F +A L NL +IY++++N + Sbjct: 139 MAHGLKFKEEHGLGSEGEKPVVVCSLGDGSVTEGEVAEAFQMAVLKNLPIIYLVQDNDWG 198 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 + + A + + MQ +G D M +A+ + R KGP+++ Sbjct: 199 ISATGKEMRAMDAYEYAAGFKGLKRMQANGTDFEDSYTKMGEAIKHVRNRKGPVLLHA-N 257 Query: 282 YRYRGHSMSDPAN--YRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 GH S YR+ +++ E+ + DPI + K LL N ++ Sbjct: 258 CPLLGHHTSGVRKEWYRSADDL-ELHTLGDPIPKFHKYLLTNNFS 301 >gi|84626387|gb|ABC59733.1| pyruvate dehydrogenase E1 alpha [Spermophilus parryii] Length = 61 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 35/60 (58%), Positives = 50/60 (83%) Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG Sbjct: 2 DEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRG 61 >gi|255535522|ref|YP_003095893.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Flavobacteriaceae bacterium 3519-10] gi|255341718|gb|ACU07831.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Flavobacteriaceae bacterium 3519-10] Length = 690 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 21/293 (7%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMH 145 G EA+ + LT+ D + YR+ +L G + ++M +L + S G+ H Sbjct: 47 GHEAIQLATAYQLTKEDWVSPYYRDDSLLLGIGFEPYRLMLQLLAKADDPFSGGRSYYSH 106 Query: 146 MFSTKNGF---YGGHGIVGAQVSLGTGIA--------FANKYRRSDKICVVCFGDGAANQ 194 S + G Q TG+A F K ++ I + GD + + Sbjct: 107 PSSLEENLPKIIHQSSATGMQAIPTTGVAQGIKYIQEFNLKTYENNPIAICSMGDNSVTE 166 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS--FNIPGMQVDGM 252 G+V E+F AAL L +I+++++N++ G SV++ A+T+ + V+ + ++VDG Sbjct: 167 GEVSEAFQFAALHQLPIIFLVQDNEW--GISVTKEEARTSDAYEFVAGFTGLNRVRVDGT 224 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN--YRTREEINEMRSNHDP 310 D A M KAV + R P+++ T GH S YR E + R+ DP Sbjct: 225 DFVASYEAMKKAVDFVREEGQPVVVCAKTVLI-GHHTSGVRREFYRDEENLTTHRAK-DP 282 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +RKRL+ + A E L EIE N R+ + A + ++P P + + I Sbjct: 283 GVILRKRLIEDGVA-ENILNEIEKNARQQAEKDFKKAIAAEDPKPDTVKNHIF 334 >gi|37525807|ref|NP_929151.1| hypothetical protein plu1883 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785236|emb|CAE14176.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 665 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 128/301 (42%), Gaps = 10/301 (3%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLL R F+ ++ + G F G E + V + + + D ++ YR+ +LA Sbjct: 31 MLLSREFDNRSAIVTRQGR-AWFHVSAAGHEGLAV-LPQLMEKNDVLVPYYRDRALVLAR 88 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ ++ EL G+ S G+ S H S ++ + + G Q G A+A+ Sbjct: 89 GMSIVEMTRELMGKATSHSAGRTMSNHFCSKEHNIFSVVSLTGTQCIPAAGAAWASVLDN 148 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + + V GD A QG+ YE+ + A L V++V+ +N+ + TS + + + Sbjct: 149 KNGLVVCGVGDAATRQGEFYEAVSFAVEKRLPVVFVVSDNKLGISTSTEKMAPY----RL 204 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRT 297 G+ +VD + + R + P I+ R HS SD YRT Sbjct: 205 GIFNECLIRRVDARKPETLFTVAQEVFNKARFERTPCILVCRMDRLDSHSNSDSHKLYRT 264 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 +E+ ++ DPIE L +E L E + ++ + E ++EPDPA Sbjct: 265 PDELEVLQ---DPIENYVAYLKEKGAITEQALAEQKERIKADVAEIFERVYHEEEPDPAS 321 Query: 358 L 358 + Sbjct: 322 V 322 >gi|301168342|emb|CBW27932.1| putative pyruvate (oxoisovalerate) Dehydrogenase, alpha-beta fusion [Bacteriovorax marinus SJ] Length = 729 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 76/292 (26%), Positives = 124/292 (42%), Gaps = 24/292 (8%) Query: 87 GQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGI-SKGKGGSM 144 G E V+ ++ D I YR+ GV +++ + G G S G+ Sbjct: 72 GHEGVLTAAAFAMKPRYDWFIPYYRDRALCTGLGVTPYEMLCQANGNIGDTASHGRQMPA 131 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS---------------DKICVVCFGD 189 H + K G Q G+A A +Y S D++ GD Sbjct: 132 HWGNVKLNIVNKSSCTGTQFLQACGVAEAGEYLNSLDAQGDDVGTDNFKDDEVVYTSCGD 191 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 G +QG+ +E A + L V++ +E+N YA+ T + + SK F PG++V Sbjct: 192 GTTSQGEFWEGLTTACVNKLPVLFHVEDNGYAISTPTFVQTPGGSISKAMDEF--PGLKV 249 Query: 250 ---DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMR 305 DG AT +AV + RA KGP+++ R HS+SD + YRT+EE+ E + Sbjct: 250 LECDGNCPIESYATFVEAVKHIRAKKGPVLVHSHVTRPYSHSLSDDQSMYRTKEELAEEK 309 Query: 306 SNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 D K L+ +E ++KE+ V K + ++ A + + P P + Sbjct: 310 V-IDVFNSYPKTLIETGIMTESEVKELLDEVSKEVRQAMNDAIATEWPKPED 360 >gi|37520663|ref|NP_924040.1| 2-oxoisovalerate dehydrogenase E1 component subunits alpha and beta [Gloeobacter violaceus PCC 7421] gi|35211657|dbj|BAC89035.1| gll1094 [Gloeobacter violaceus PCC 7421] Length = 481 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 71/303 (23%), Positives = 134/303 (44%), Gaps = 10/303 (3%) Query: 58 LMLLIRRFEEKAGQLYGMGMVGGFCHLC-IGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 LML++R + + G L G G+ H+ +G E++I + L D + T YR+ +L Sbjct: 18 LMLIVREGDLREGNLMRQG--KGWIHIPGMGHESLI-AITHHLHREDYLFTYYRDRALML 74 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G A ++ + + G+G +H + + +Q G A+ K+ Sbjct: 75 GKGFTAQQLAWDYFACAKSSTGGRGMPVHCSAKHLNIFPPATPTASQCLPAVGAAWGIKH 134 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 + + GD + QG+ YE+ +A L VI+V+E+N Y + TS Q F Sbjct: 135 SEKTDVVICTIGDASVRQGEFYEAVCMAVQERLPVIFVVEDNAYGISTSTKH---QLPF- 190 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-Y 295 + G+ ++VDG + +A+ R GP I+ + R H+ SD Y Sbjct: 191 RLGIFNEEIFVRVDGRHPAEIFNHSGQAITKARQGNGPTILWVELDRLVSHTNSDDHRIY 250 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R +EEI+ M DP+ + + L++ + + + ++ I+ + A+ + P+P Sbjct: 251 RPKEEIDAMLQR-DPLSVLARHLINAGELTATEWQALQFKTAMTIDEIYQQAERENSPNP 309 Query: 356 AEL 358 ++ Sbjct: 310 DQI 312 >gi|227204467|dbj|BAH57085.1| AT1G59900 [Arabidopsis thaliana] gi|227204471|dbj|BAH57087.1| AT1G59900 [Arabidopsis thaliana] Length = 107 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 37/87 (42%), Positives = 64/87 (73%), Gaps = 1/87 (1%) Query: 279 MLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 M TYRY GHSMSDP + YRTR+EI+ +R DPIE+++K +L + A+E +LK++E +R Sbjct: 1 MDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIR 60 Query: 338 KIINNSVEFAQSDKEPDPAELYSDILI 364 K +++++ A+ P+P+EL++++ + Sbjct: 61 KEVDDAIAKAKDCPMPEPSELFTNVYV 87 >gi|193215996|ref|YP_001997195.1| dehydrogenase E1 component [Chloroherpeton thalassium ATCC 35110] gi|193089473|gb|ACF14748.1| dehydrogenase E1 component [Chloroherpeton thalassium ATCC 35110] Length = 702 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 5/281 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 Y+ + L R + +A GM + G + + + + ++ G D + YR+ Sbjct: 35 YKYLQLGRSLDLRAASYLKKGMGWSYHAPYQGHDGIQLALGLTFRAGKDFLFPYYRDMLT 94 Query: 115 ILACGVDASKIMAELTGRQGGISKG-KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 LA G+ +I+ R ++ G + S H + G + G G+A A Sbjct: 95 CLAAGLTPEEILLNGLSRDTDVAGGGRHMSNHFAKPEIRIQNGSSLTGNHSLHAVGVARA 154 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 K D+I G+ A ++G YE+ + A+ L VI+VI+NN+Y + V SA Sbjct: 155 IKKYNGDEIAFYSGGESACSEGYFYEAVSGASREMLPVIFVIQNNRYGISVPVKDQSANP 214 Query: 234 NFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 ++ F N+ + DG D+ M +A + G +I+ R HS SD Sbjct: 215 IVAENFSGFLNLRIIYCDGTDVFDSWRAMQEATKHVLDGNGAVIVHADCVRIGAHSNSDN 274 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 YR+ EE+ E DP+ + R L+ NK +E +LK I Sbjct: 275 HQLYRSPEEL-EKAKERDPLPRFRNHLIENKLLTEDELKAI 314 >gi|330752282|emb|CBL87237.1| 2-oxoisovalerate dehydrogenase E1 component subunits alpha and beta [uncultured Sphingobacteria bacterium] Length = 529 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 1/150 (0%) Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +A +K + KI V G+G ++G+ +E+ N+AA+W L VI++IENN Y + T Sbjct: 1 MALGHKLAKEKKISVAFTGEGGTSEGEFHEALNVAAVWKLPVIFIIENNGYGLSTETKEQ 60 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 A N + RG+ + + +DG +I V T+ + + P +IE T+R RGH Sbjct: 61 YACENLADRGLGYGMKSKVIDGNNILEVYQTIVQIKKEITKNPEPWLIECKTFRMRGHEE 120 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLL 319 + Y ++ + E + DPI + L+ Sbjct: 121 ASGTKYVPKKLL-EQWAKKDPIANFEQYLV 149 >gi|218673479|ref|ZP_03523148.1| dehydrogenase E1 component [Rhizobium etli GR56] Length = 117 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 46/113 (40%), Positives = 66/113 (58%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +++ + YR M +IRRFEE+ G + G HL G+EA VG+ + L EGD + Sbjct: 5 QLPQDKLIEVYRNMRMIRRFEERVMDEMATGDIPGNTHLYAGEEASAVGVCLHLDEGDYI 64 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 + +R HGH +A GVD +MAEL G+ G GKGGSMH+ + G G +G Sbjct: 65 SSTHRGHGHSIAKGVDIDSMMAELFGKASGTCGGKGGSMHIADLRKGMLGANG 117 >gi|167039404|ref|YP_001662389.1| dehydrogenase, E1 component [Thermoanaerobacter sp. X514] gi|300914050|ref|ZP_07131367.1| dehydrogenase E1 component [Thermoanaerobacter sp. X561] gi|307725268|ref|YP_003905019.1| dehydrogenase E1 component [Thermoanaerobacter sp. X513] gi|166853644|gb|ABY92053.1| dehydrogenase, E1 component [Thermoanaerobacter sp. X514] gi|300890735|gb|EFK85880.1| dehydrogenase E1 component [Thermoanaerobacter sp. X561] gi|307582329|gb|ADN55728.1| dehydrogenase E1 component [Thermoanaerobacter sp. X513] Length = 262 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/151 (35%), Positives = 75/151 (49%), Gaps = 11/151 (7%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLY----------GMGMVGGFCHLCIGQEAVIVGMKMS 98 KE + Y M+ IR +EE + Y G V G HL GQE V VG+ M Sbjct: 5 KETLIRMYLEMVTIRLYEETMAEAYQEGKYPVFNIASGPVPGEMHLAAGQEPVAVGVCMH 64 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L + D ++ +R H +A GVD ++ AE+ G+ G+ +GKGG MH+F F G Sbjct: 65 LKKEDAVVGTHRPHHFAIAKGVDLKRMTAEIFGKVTGLGRGKGGHMHLFDPDVHF-SCSG 123 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGD 189 IVGA + G A K R+ ++ V FG+ Sbjct: 124 IVGASIPQAVGAALTFKMRKEKRVAVAFFGE 154 >gi|268317105|ref|YP_003290824.1| Transketolase domain-containing protein [Rhodothermus marinus DSM 4252] gi|262334639|gb|ACY48436.1| Transketolase domain protein [Rhodothermus marinus DSM 4252] Length = 709 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 80/285 (28%), Positives = 126/285 (44%), Gaps = 15/285 (5%) Query: 87 GQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKG-GSM 144 G E V + LT D + T YR +LA GV + +A G+ G S G+ G + Sbjct: 64 GHELAQVLLGQLLTHPKDGVSTYYRSRPLMLALGVSPEEALAASLGKAGAYSDGRDVGVV 123 Query: 145 HMFSTKNG--FYGGHGIVGAQVSLGTGIAFANKYRRS--------DKICVVCFGDGAANQ 194 +NG G VG+Q + G G A A YRR + VV G+G+ Sbjct: 124 CNLPGRNGPTVLPMAGDVGSQYTPGVGWAQAICYRRDVLREEAYRGALAVVHGGEGSVAT 183 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMD 253 + + NIA L V++ IE+N YA+ + N SK SF N+ + DG Sbjct: 184 NGFWAALNIATTLRLPVLFYIEDNGYAISVPRELQTPGGNISKNLASFQNLQVLDGDGAR 243 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 + +AV R+ +GP+++ + R GHS D Y+ E+ E DP+ Sbjct: 244 PEEAARLLHEAVQRVRSGEGPVLLRLTMPRLSGHSGHDNQAYKP-PEVLEAERARDPLPA 302 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +R L+ + E E+E V + + ++E A + +PDP+ + Sbjct: 303 LRAFLVPAVLSPEA-WAELEAEVAREVEAALEAALARPDPDPSRV 346 >gi|91217141|ref|ZP_01254103.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Psychroflexus torquis ATCC 700755] gi|91184741|gb|EAS71122.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Psychroflexus torquis ATCC 700755] Length = 686 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 70/293 (23%), Positives = 125/293 (42%), Gaps = 26/293 (8%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMH 145 G E + + M L D + YR+ +LA G+ +M +L + + S G+ H Sbjct: 42 GHEVIQTAVGMQLQPQDYIYPYYRDDSILLAIGMQPKDLMLQLLAKKEDPFSAGRTYYSH 101 Query: 146 MF---STKNGFYGGHGIVGAQVSLGTGIAFANKYRR----------SDKICVVC-FGDGA 191 + K G Q TG A Y+ S+ VVC GD + Sbjct: 102 PSLNDADKPKIPHQSSATGMQAIPATGAAMGFWYKEHKDSKFDIQNSESPVVVCSLGDAS 161 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 +G++ E+F +AAL L +IY++++N + + + AQ F + + +DG Sbjct: 162 VTEGEIAEAFQMAALKQLPIIYLVQDNGWDISANAEETRAQDAFEYAKGFHGLEAISIDG 221 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIE----MLTYRYRGHSMSDPANYRTREEINEMRSN 307 D +K + R + P ++ +L + G M YR E ++MR Sbjct: 222 TDFIESYTEFEKVLNTVRKERRPFLVHAKCPLLNHHTSGVRME---FYRDDLEESKMR-- 276 Query: 308 HDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 DP +++K+LL N + +EG+L IE + + + A ++P P +L++ Sbjct: 277 -DPYPKLKKQLLENGF-TEGELDAIEKAAKAEVAKDYQEALLAEDPKPEDLFT 327 >gi|300778930|ref|ZP_07088788.1| 3-methyl-2-oxobutanoate dehydrogenase [Chryseobacterium gleum ATCC 35910] gi|300504440|gb|EFK35580.1| 3-methyl-2-oxobutanoate dehydrogenase [Chryseobacterium gleum ATCC 35910] Length = 690 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 21/285 (7%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMH 145 G EA+ + L + D + YR+ +L G + ++M +L + S G+ H Sbjct: 47 GHEAIQLATAYQLKKEDWISPYYRDESILLGIGFEPYQLMLQLLAKADDPFSGGRSYYSH 106 Query: 146 MFS---TKNGFYGGHGIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQ 194 S K G Q TG+A KY + ++ + V GD + + Sbjct: 107 PSSRDENKPKIIHQSSATGMQTIPTTGVAQGIKYIQDFNLQNFENNPVVVCSLGDNSVTE 166 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS--FNIPGMQVDGM 252 G+V E+ AAL L +I+++++N++ G SV++ A+T + V+ + M+VDG Sbjct: 167 GEVSEALQFAALHQLPIIFLVQDNEW--GISVTKEEARTCDAYDFVAGFTGLSRMRVDGT 224 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN--YRTREEINEMRSNHDP 310 D M KAV + R + P+++ T GH S YR E++ + R+ DP Sbjct: 225 DFVESFEAMKKAVDFVRTERKPLVVCAKTVLI-GHHTSGVRREFYRDEEDLTKHRAK-DP 282 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 E +RK LL + A E LK+I R + E A++ ++P P Sbjct: 283 GEILRKYLLESG-ADEDLLKQITKKARLEAEEAFEKAKNAEDPKP 326 >gi|332519737|ref|ZP_08396201.1| Transketolase central region [Lacinutrix algicola 5H-3-7-4] gi|332044296|gb|EGI80490.1| Transketolase central region [Lacinutrix algicola 5H-3-7-4] Length = 697 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 66/308 (21%), Positives = 133/308 (43%), Gaps = 37/308 (12%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG-ISKGKGGSMH 145 G EA+ + + M L D YR+ +L+ G++ +M +L ++ S G+ H Sbjct: 42 GHEAIQIALGMQLLPQDYAFPYYRDDAMLLSFGLEPYDLMLQLLAKKDDPFSGGRTYYSH 101 Query: 146 MF---STKNGFYGGHGIVGAQVSLGTGIAFANKYRR----------SDK----------- 181 K G Q TG+A KY+ SD Sbjct: 102 PSLKDDDKPKIPHQSSATGMQTIPATGVAMGMKYKELQGLDDYSLESDPVSSSAVENALN 161 Query: 182 -ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 I V GD + +G++ E+F +AAL + ++Y++++N + + + + AQ F Sbjct: 162 PITVCSLGDASVTEGEIAEAFQMAALKQMPILYLVQDNGWDISANAAETRAQNAFEYAQG 221 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII----IEMLTYRYRGHSMSDPANYR 296 + + +DG + ++K + R + P + + +L + G M Sbjct: 222 FKGLEAISIDGANFTESYQALEKVIETIRTERRPFLVHAKVPLLNHHTSGVRME-----W 276 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 R++++E RS DP ++++LL + SE +++EIE + + + + E A ++P P Sbjct: 277 YRDDLDEARS-RDPYPVIKQQLLDAGF-SEQEVEEIENSAKAKVQSDFEKALKAEDPKPE 334 Query: 357 ELYSDILI 364 +L+++ + Sbjct: 335 DLFTNDFV 342 >gi|130381649|dbj|BAF48991.1| branched-chain alpha-keto acid decarboxylase [Streptomyces virginiae] Length = 677 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 79/310 (25%), Positives = 129/310 (41%), Gaps = 28/310 (9%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+L R + ++G + G + H+ + + L D + YR+ +LA Sbjct: 42 MMLSRECDRRSGIVLRQGQ--AWFHISSAGHEALAALCELLEPEDLIFPHYRDRTLMLAR 99 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+DA +L + G S G+ S H + G+Q G A+A+ Sbjct: 100 GMDAEGQARDLMAKGGSHSAGRNMSSHFSHRPGNVFSLASPTGSQCLPAAGAAWASVLSG 159 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 K+ V GD + QG+ +E+ A L V++++ +N+Y + T S Q + Sbjct: 160 ERKVVVCSIGDASTRQGEFFEALAFAVERKLPVVFLVSDNRYGISTPTDGLSPQ----RL 215 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRT 297 G+ + VDG D AV A + RA +GP ++ R H+ SD YRT Sbjct: 216 GLMPDAITKVVDGSDPDAVHAAAAAVLPDVRAGRGPAVLWCRLDRLDSHTSSDDQRLYRT 275 Query: 298 REEINEMRSNHDPIEQVRKRL-----LHNKWASEGDLKEIEMNVRKIINNSVE--FAQSD 350 ++E+ MR DP+ RL + WA + VR + + VE F + Sbjct: 276 KDELAAMR---DPVALFTDRLEAEGTIVPGWADQ---------VRARLADDVEEVFDRVA 323 Query: 351 KEP--DPAEL 358 EP DP E+ Sbjct: 324 GEPSADPGEV 333 >gi|300782277|ref|YP_003762568.1| pyruvate/2-oxoglutarate dehydrogenase E1 component subunit alpha [Amycolatopsis mediterranei U32] gi|299791791|gb|ADJ42166.1| pyruvate/2-oxoglutarate dehydrogenase E1 component subunit alpha [Amycolatopsis mediterranei U32] Length = 247 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 83/311 (26%), Positives = 124/311 (39%), Gaps = 74/311 (23%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 AYR+M IR EE+ G VGG EA+ G+ + L D + +R HGH Sbjct: 8 AYRVMRTIRAVEERVRATGGNRYVGG--------EALAAGVCLHLDSRDAIAGTHRRHGH 59 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 +A GVD ++AE+ H T + +G L G A A Sbjct: 60 RIAKGVDVRAVLAEI-------------QQHRLITTD-------TLGGVPLLICGAAIAA 99 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + + + V GD G E+ +A+ W+L VI+V EN YA Sbjct: 100 KQQDTGGVGVAFLGDA---PGTTLEALTLASAWHLPVIFVTENPGYA------------- 143 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 R +PG+ +DG D AV +AV R GP ++E R+ G + Sbjct: 144 --DRVAGLGVPGVVIDGSDFFAVHEAAGEAVGRARDGGGPTLLEAGFPRHVGDCLH---R 198 Query: 295 YRTR-EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +RTR + E+R EQV L I+ V +++ +SV +S Sbjct: 199 FRTRVTDSGELR------EQV--------------LDAIDAEVAQLVEDSVAAPKS---- 234 Query: 354 DPAELYSDILI 364 P L +D+ + Sbjct: 235 APDALETDVYV 245 >gi|298207630|ref|YP_003715809.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Croceibacter atlanticus HTCC2559] gi|83850266|gb|EAP88134.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Croceibacter atlanticus HTCC2559] Length = 688 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 65/293 (22%), Positives = 125/293 (42%), Gaps = 26/293 (8%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAE-LTGRQGGISKGKGGSMH 145 G E + + M L D + YR+ +L+ G+ +M + L + S G+ H Sbjct: 44 GHEVIQNAVGMQLLPQDYVFPYYRDDSILLSIGMTPYDLMLQVLAKKDDPFSGGRTYYSH 103 Query: 146 MF---STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD-----------KICVVCFGDGA 191 + K G Q TG+A YR I V GD + Sbjct: 104 PSLKDADKPKIPHQSSATGMQAIPATGVAMGMWYREDQNLGYDSKTSELPITVCSLGDAS 163 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 +G++ E+F +AAL L ++Y++++N + + + + AQ + + + +DG Sbjct: 164 VTEGEIAEAFQMAALKQLPILYLVQDNGWDISANEAETRAQNAYEYAAGFHGLEAVTIDG 223 Query: 252 MDIRAVKATMDKAVAYCRAHKGPII----IEMLTYRYRGHSMSDPANYRTREEINEMRSN 307 D +T+ K + R + P + + +L + G M R++++E ++ Sbjct: 224 TDFEESYSTIQKVIKTMREERRPFLVHAKVPLLNHHTSGVRME-----FYRDDLDEAKT- 277 Query: 308 HDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 DP +++K LL N + E DL IE V+ + + + A ++P P +L++ Sbjct: 278 RDPYPKLQKLLLDNGFI-EKDLTAIETEVKSEVEEAYQKALKAEDPKPEDLFT 329 >gi|329961772|ref|ZP_08299803.1| Transketolase protein [Bacteroides fluxus YIT 12057] gi|328531513|gb|EGF58353.1| Transketolase protein [Bacteroides fluxus YIT 12057] Length = 678 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/331 (25%), Positives = 143/331 (43%), Gaps = 9/331 (2%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ + E Y LM L R +EKA + + G + + + M Sbjct: 1 MKKYDIKTTDAESLKKWYYLMTLGRALDEKAPAYLLQSLGWSYHAPYAGHDGIQLAMGQV 60 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFY 154 T G D + YR+ +L+ G+ +++ L G G GG S H + Sbjct: 61 FTRGEDFLFPYYRDMLTVLSAGMTVEELI--LNGISKATDPGSGGRHMSNHFAKPEWHIE 118 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G+A A Y + + G+ AA++G VYE+ N A+L L VI+V Sbjct: 119 NISSATGTHDLHAAGVARAMVYYGHKGVVITSHGESAASEGFVYEAVNGASLERLPVIFV 178 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 ++N Y + +A + F N+ + +G D+ M +A Y ++ Sbjct: 179 WQDNGYGISVPKKDQTAARKVADNFSGFKNLKIIHCNGKDVFDSMNAMAEAREYALLNRN 238 Query: 274 PIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P+I++ R HS SD YR E+ ++ DP+ + R+ LL K +E +LKEI Sbjct: 239 PVIVQANCVRIGSHSNSDKHTLYRDEGELAYVKEA-DPLMKFRRMLLRYKRLTEEELKEI 297 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 E RK + + A + +PDP ++ +L Sbjct: 298 EERARKELTAANRKALAAPDPDPKTIFDYVL 328 >gi|182416011|ref|YP_001821077.1| transketolase central region [Opitutus terrae PB90-1] gi|177843225|gb|ACB77477.1| Transketolase central region [Opitutus terrae PB90-1] Length = 694 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 88/335 (26%), Positives = 154/335 (45%), Gaps = 18/335 (5%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L E+ + E L Y M L R + + L+ G++ G G E +IV + + Sbjct: 7 LRAVELESPSSETLLQIYAWMQLARTGDNRILDLFRQGLIKGTVTGGQGNEGLIVPLAL- 65 Query: 99 LTEGDQMITAYREH---GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 L + +T + GH++ G + + + G +K + G++H KN Sbjct: 66 LADKAIDVTCFTHRDLGGHLIWSG-HLCQHLNQYFANAGSPTKAREGNVHRGDPKNRSLP 124 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 +GA + G+ + + R + FGDG+++ G V+ES N+A+L NL +++VI Sbjct: 125 MISHLGAMLGPVLGMTDSQRRRGHRAVGFAFFGDGSSSTGDVHESLNLASLLNLPILFVI 184 Query: 216 ENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDG-MDIRAVKATMDKAVAYCRAHKG 273 ENN YA T +S + T +R + I G+ +D D+ A T+ A+ R+ Sbjct: 185 ENNCYAYSTPMSEQFCEGTALWRRAAGYGIEGLALDATTDVAATARTLAAAIEKVRSTSR 244 Query: 274 PIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD---LK 330 P++IE T R RGH+ D +Y E +E DP+ + R++L A+ G L Sbjct: 245 PMLIEAQTLRLRGHAAYDTCDYLKPGE-SEGFFARDPLPKFRQQL-----AAAGHGARLD 298 Query: 331 EIEMNVRKIINNSVEFAQSDKEP--DPAELYSDIL 363 I+ + I ++ + + + P D A L +D+ Sbjct: 299 AIDAELSAFIEACIKVSLAVERPAVDVAALQADVF 333 >gi|260177225|gb|ACX33947.1| KAS III-domain containing protein [uncultured bacterium EC5] Length = 1118 Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 130/315 (41%), Gaps = 7/315 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++EF + L YR + R ++ +L G F + + + L D Sbjct: 1 MNEFLRSDALRLYRWVRTARCIDDMERELVARGE--AFFQVSGAGHEAGAALALVLNPED 58 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YR+ +LA G+ + L S G+ S H+ + G VG Sbjct: 59 YLHCHYRDKALMLARGIPVLEFFDSLLCSGASHSAGRQMSAHLSAPALKILSVVGPVGNS 118 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G+A K + S I + GDG QG+V ES A L V+++IE+N +++ Sbjct: 119 ALQAAGVAEQIKNQPSHPIVLCSLGDGMTQQGEVMESIAEAVRSALPVLFLIEDNHFSIS 178 Query: 224 TSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T + ++ + SF + +VDG D A +T+ V R + P++ M Sbjct: 179 TPTGGKTFFSHPNGDAESFYGLAIHRVDGTDPVACLSTLRTLVNNMRESRAPVLCVMQVE 238 Query: 283 RYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 R H+ +D YR E + +R DPI ++R +L+ + A L ++ +R + Sbjct: 239 RLTSHTNADDDTVYRDPEAVQRLRETADPIAKLRAQLMASGIADSA-LTALDQEIRAEVR 297 Query: 342 NSVEFAQSDKEPDPA 356 + E A P PA Sbjct: 298 AAAEKALD--HPAPA 310 >gi|256839627|ref|ZP_05545136.1| 2-oxoisovalerate dehydrogenase beta subunit [Parabacteroides sp. D13] gi|298375324|ref|ZP_06985281.1| dehydrogenase E1 component [Bacteroides sp. 3_1_19] gi|256738557|gb|EEU51882.1| 2-oxoisovalerate dehydrogenase beta subunit [Parabacteroides sp. D13] gi|298267824|gb|EFI09480.1| dehydrogenase E1 component [Bacteroides sp. 3_1_19] Length = 677 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 81/334 (24%), Positives = 144/334 (43%), Gaps = 15/334 (4%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ +KE + LM L R +EKA + + G + + + M Sbjct: 1 MKKYDIKTTDKETLRKWFYLMTLGRAIDEKAPSYLLQSLGWSYHAPYAGHDGIQLAMGQV 60 Query: 99 L-TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 + D + YR+ +L+ G+ A +I+ + ++ G + FS Sbjct: 61 FDKDTDFLFPYYRDMLTVLSAGMTAEEIILNGISKATDLTSGGRHMSNHFSKMEWHIENV 120 Query: 158 GIVGAQVSL-GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 A L G+A A Y + + G+ AA++G VYE+ N A+ L VI+V + Sbjct: 121 SSATATHDLHAAGVARAMVYYGQKGVAITSHGESAASEGYVYEAINGASNERLPVIFVFQ 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPG------MQVDGMDIRAVKATMDKAVAYCRA 270 +N Y G SV + N R V+ N G + +G D+ M +A Y A Sbjct: 181 DNGY--GISVPKKDQTAN---RKVADNFSGFKNLRIIHCNGKDVFDSMNAMTEAKEYAIA 235 Query: 271 HKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 ++ P+I++ R HS SD YR E+ ++S DP+ + + L+ +E +L Sbjct: 236 NRTPVIVQANCVRIGSHSNSDKHTLYRDENELTYVKSA-DPLYKFHRMLIRYGRFTEEEL 294 Query: 330 KEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 KEI K + + A + +PDP+ + +L Sbjct: 295 KEIADLAAKDLKAANRKAMAAPDPDPSTVKDYVL 328 >gi|150007337|ref|YP_001302080.1| 2-oxoisovalerate dehydrogenase subunit beta [Parabacteroides distasonis ATCC 8503] gi|255014033|ref|ZP_05286159.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 2_1_7] gi|301310662|ref|ZP_07216601.1| putative dehydrogenase E1 component, alpha and beta subunit [Bacteroides sp. 20_3] gi|149935761|gb|ABR42458.1| 2-oxoisovalerate dehydrogenase beta subunit [Parabacteroides distasonis ATCC 8503] gi|300832236|gb|EFK62867.1| putative dehydrogenase E1 component, alpha and beta subunit [Bacteroides sp. 20_3] Length = 677 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 81/334 (24%), Positives = 144/334 (43%), Gaps = 15/334 (4%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ +KE + LM L R +EKA + + G + + + M Sbjct: 1 MKKYDIKTTDKETLRKWFYLMTLGRAIDEKAPSYLLQSLGWSYHAPYAGHDGIQLAMGQV 60 Query: 99 L-TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 + D + YR+ +L+ G+ A +I+ + ++ G + FS Sbjct: 61 FDKDTDFLFPYYRDMLTVLSAGMTAEEIILNGISKATDLTSGGRHMSNHFSKMEWHIENV 120 Query: 158 GIVGAQVSL-GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 A L G+A A Y + + G+ AA++G VYE+ N A+ L VI+V + Sbjct: 121 SSATATHDLHAAGVARAMVYYGQKGVAITSHGESAASEGYVYEAINGASNERLPVIFVFQ 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPG------MQVDGMDIRAVKATMDKAVAYCRA 270 +N Y G SV + N R V+ N G + +G D+ M +A Y A Sbjct: 181 DNGY--GISVPKKDQTAN---RKVADNFSGFKNLRIIHCNGKDVFDSMNAMTEAKEYAIA 235 Query: 271 HKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 ++ P+I++ R HS SD YR E+ ++S DP+ + + L+ +E +L Sbjct: 236 NRTPVIVQANCVRIGSHSNSDKHTLYRDENELTYVKSA-DPLYKFHRMLIRYGRFTEEEL 294 Query: 330 KEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 KEI K + + A + +PDP+ + +L Sbjct: 295 KEIADLAAKDLKAANRKAMAAPDPDPSTVKDYVL 328 >gi|324537100|gb|ADY49490.1| Pyruvate dehydrogenase E1 component subunit alpha type II [Ascaris suum] Length = 151 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/94 (42%), Positives = 52/94 (55%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 ++ L+ Y M IRR E AG LY + GFCHL G+EA VG+K ++ D +IT Sbjct: 58 TRDDALNIYTRMQTIRRLEAAAGNLYKEQKIRGFCHLYAGEEACAVGIKSAMEPNDAIIT 117 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKG 141 +YR HG CG ++ ELTGR G GKG Sbjct: 118 SYRCHGWTYLCGPSVVPVLCELTGRMNGNVHGKG 151 >gi|308390294|gb|ADO32593.1| putative thiamine pyrophosphate dependent dehydrogenase [Rhizobium tropici CIAT 899] Length = 286 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 15/285 (5%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 +EG +E+ K+ +R+ + R + + G + F G E+ + + Sbjct: 1 MEGRFTTEYLKQ----LHRIFFVSREIDRLEREFIKQG-IAHFHVSGAGHESTAL-LNEF 54 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L + D + YR+ +LA G+ + + L S G+ S H+ S G Sbjct: 55 LQDDDWLHLHYRDKALMLARGMPIREFFSSLLATANSHSAGRQMSAHLSSRALNITSIVG 114 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 VG G+A + K++ I + C GDG QG+ E+ A V++VIE+N Sbjct: 115 PVGNNALHAVGVAASLKHKPGMPIAICCAGDGTTQQGEFLEAVAEAVRSQYPVVFVIEDN 174 Query: 219 QYAMGTSVSRASAQTNFS----KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 +++ T R QT F + I ++ DG D+ A + KAV + R ++ P Sbjct: 175 SFSIST---RTGKQTFFDLPTGPASSFYGIDIIRTDGDDLAASRDAFHKAVRHSRNNRTP 231 Query: 275 IIIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRL 318 I+ + R H+ D YRT EI E S+ DP+ +R L Sbjct: 232 SIVLLNVERLSDHTNADDQKTYRTLLEI-EAGSSRDPLPNLRAML 275 >gi|163786334|ref|ZP_02180782.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Flavobacteriales bacterium ALC-1] gi|159878194|gb|EDP72250.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Flavobacteriales bacterium ALC-1] Length = 682 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 59/292 (20%), Positives = 136/292 (46%), Gaps = 26/292 (8%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG-ISKGKGGSMH 145 G EA+ + + + + D YR+ +L+ G++ +M +L ++ S G+ H Sbjct: 40 GHEAIQIALGLQVLPQDYAFPYYRDDAMLLSFGLEPYDLMLQLLAKKDDPFSGGRSYYSH 99 Query: 146 MF---STKNGFYGGHGIVGAQVSLGTGIAFANKYRR---------SDKICVVCFGDGAAN 193 + K G Q TG+A +Y+ + I + GD + Sbjct: 100 PSLKDNNKPKIPHQSSATGMQAIPATGVAMGMQYKELQGLNDESIENPISICSLGDASVT 159 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN-IPGMQVDGM 252 +G++ E+F +AAL + ++Y++++N + + + + AQ N ++ F+ + + +DG Sbjct: 160 EGEIAEAFQMAALKQMPILYLVQDNGWDISANEAETRAQ-NAAEYAAGFHGLEAISIDGA 218 Query: 253 DIRAVKATMDKAVAYCRAHKGPII----IEMLTYRYRGHSMSDPANYRTREEINEMRSNH 308 + ++K + R + P + + +L + G M R++++E RS Sbjct: 219 NFIESYVALEKVIKTIREERRPFLVHAKVPLLNHHTSGVRME-----WYRDDLDEARS-R 272 Query: 309 DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 DP ++++LL N ++S+ ++++IE + + + + A ++P P +L++ Sbjct: 273 DPYPVLKQQLLDNGFSSK-EVEDIENEAKSKVASDFKKALQAEDPKPEDLFT 323 >gi|262382089|ref|ZP_06075227.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 2_1_33B] gi|262297266|gb|EEY85196.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 2_1_33B] Length = 677 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 80/334 (23%), Positives = 143/334 (42%), Gaps = 15/334 (4%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ +KE + LM L R +EKA + + G + + + M Sbjct: 1 MKKYDIKTTDKETLRKWFYLMTLGRAIDEKAPSYLLQSLGWSYHAPYAGHDGIQLAMGQV 60 Query: 99 L-TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 + D + YR+ +L+ G+ A +I+ + ++ G + FS Sbjct: 61 FDKDTDFLFPYYRDMLTVLSAGMTAEEIILNGISKATDLTSGGRHMSNHFSKMEWHIENV 120 Query: 158 GIVGAQVSL-GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 A L G+A A Y + + G+ AA++G VYE+ N A+ L VI+V + Sbjct: 121 SSATATHDLHAAGVARAMVYYGQKGVAITSHGESAASEGYVYEAINGASNERLPVIFVFQ 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPG------MQVDGMDIRAVKATMDKAVAYCRA 270 +N Y G SV + N R V+ N G + +G D+ M +A Y A Sbjct: 181 DNGY--GISVPKKDQTAN---RKVADNFSGFKNLRIIHCNGKDVFDSMNAMTEAKEYAIA 235 Query: 271 HKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 ++ P+I++ R HS SD YR E+ ++S DP+ + + L+ +E +L Sbjct: 236 NRTPVIVQANCVRIGSHSNSDKHTLYRDENELTYVKSA-DPLYKFHRMLIRYGRFTEEEL 294 Query: 330 KEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 KEI K + + + +PDP+ + +L Sbjct: 295 KEIADLAAKDLKAANRKVMAAPDPDPSTVKDYVL 328 >gi|300722714|ref|YP_003712004.1| putative Pyruvate dehydrogenase [Xenorhabdus nematophila ATCC 19061] gi|297629221|emb|CBJ89818.1| putative Pyruvate dehydrogenase (acetyl-transferring) [Xenorhabdus nematophila ATCC 19061] Length = 664 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 72/309 (23%), Positives = 133/309 (43%), Gaps = 20/309 (6%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 ++ R M L R ++++ G F G E + V ++ LT D + YR+ Sbjct: 24 MALLRTMQLSREIDKRSALFTRQGR-AWFHMSAAGHEGLAVLAQL-LTPSDLIFPHYRDR 81 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 +LA G+ + EL + S G+ + H NG + +Q TG A+ Sbjct: 82 ALVLARGMSTEAMARELMAKADSHSGGRNMTNHFCDHANGIFSIASPTASQCLPATGAAW 141 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A K + ++ V GD + QG+ YE+ A L +++V+ +N++ + T+ Sbjct: 142 AAKLEKQPRLIVCGIGDASTRQGEFYEAVCFAVEKQLPIVFVVSDNRWGISTATQET--- 198 Query: 233 TNFSKRGVSFNI----PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 T F+ + S + Q D + ++ DKA R P ++ T R HS Sbjct: 199 TPFNLKIFSDELIRHADARQPDTL-FEIAQSVFDKA----RNQHIPAVLVCRTDRLDSHS 253 Query: 289 MS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 S D YR+ EE+ M+ DPI +++ + + ++ D ++ + + + + F Sbjct: 254 SSDDQKKYRSPEELASMQ---DPIAYWVEKMQAHNYLNQDDCQKQQQEIIEEVAGI--FE 308 Query: 348 QSDKEPDPA 356 + +E DPA Sbjct: 309 RVYQEADPA 317 >gi|89890474|ref|ZP_01201984.1| putative pyruvate/2-oxoglutarate dehydrogenase, El component: transketolase [Flavobacteria bacterium BBFL7] gi|89517389|gb|EAS20046.1| putative pyruvate/2-oxoglutarate dehydrogenase, El component: transketolase [Flavobacteria bacterium BBFL7] Length = 692 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 70/303 (23%), Positives = 133/303 (43%), Gaps = 38/303 (12%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQ-----GGISKGKG 141 G E + + M L D + YR+ +L+ G+ +M +L ++ GG + Sbjct: 40 GHEVIQTALGMQLLPQDFVFPYYRDDAMLLSVGMKPYDLMLQLLAKKDDPFSGGRTYYSH 99 Query: 142 GSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS-------------------DKI 182 S++ K G Q TG+A YR S D + Sbjct: 100 PSLNDID-KPKIPHQSSATGMQAIPATGVALGIHYRESLTDEQRAAVDASSDSSVTSDSV 158 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 V GD + +G++ E+F +AAL L ++Y++++N + + + + AQ N ++ F Sbjct: 159 VVCSLGDASVTEGEIAEAFQMAALKQLPILYLVQDNGWDISANEAETRAQ-NAAEYAAGF 217 Query: 243 N-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE----MLTYRYRGHSMSDPANYRT 297 + I + +DG D T+ + + R + P ++ +L + G M Sbjct: 218 HGIEAISIDGTDFEESYKTLKEVIEKIRTERRPFLVHAKVPLLNHHTSGVRME-----FY 272 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 R+++ E RS DP ++R+ LL N + SE D+ + + N++E A + +P+PA+ Sbjct: 273 RDDLEEARS-RDPYPRMRQLLLDNGF-SEQDVDGYDAFAKAESKNALEQAMTMPDPEPAD 330 Query: 358 LYS 360 L++ Sbjct: 331 LFT 333 >gi|163754062|ref|ZP_02161185.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Kordia algicida OT-1] gi|161326276|gb|EDP97602.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Kordia algicida OT-1] Length = 690 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 67/302 (22%), Positives = 131/302 (43%), Gaps = 36/302 (11%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG-ISKGKGGSMH 145 G EA+ + M L D YR+ +L+ G+ +M +L ++ S G+ H Sbjct: 40 GHEAIQCAVGMQLLPQDYAFPYYRDDAMLLSIGMRPYDLMLQLLAKKDDPFSGGRTYYSH 99 Query: 146 MF---STKNGFYGGHGIVGAQVSLGTGIAFANKY-------------------RRSDKIC 183 + K G Q TG+A KY R + I Sbjct: 100 PSLRETDKPKIPHQSSATGMQTIPATGVAMGMKYKEIQGIEDQAAKDSPFDDTRDLNPIT 159 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 V GD + +G++ E+F +AAL L ++Y++++N + + + + AQ N ++ F Sbjct: 160 VCSLGDASVTEGEIAEAFQMAALKQLPILYLVQDNGWDISANAAETRAQ-NAAEYAEGFK 218 Query: 244 -IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII----IEMLTYRYRGHSMSDPANYRTR 298 + + +DG + T+ K + R + PI+ + +L + G M R Sbjct: 219 GLDAVSIDGANFIESYETLKKVIKTIRDERRPILVHAKVPLLNHHTSGVRME-----WYR 273 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +++ E RS DP ++++LL + +++E + +IE + + + A ++P PA+L Sbjct: 274 DDLEEARS-RDPYPVIKQQLLDHGFSAEA-VDKIEADAIAQVKTDFQEALKAEDPTPADL 331 Query: 359 YS 360 ++ Sbjct: 332 FT 333 >gi|148553685|ref|YP_001261267.1| transketolase domain-containing protein [Sphingomonas wittichii RW1] gi|148498875|gb|ABQ67129.1| Transketolase domain protein [Sphingomonas wittichii RW1] Length = 692 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 17/225 (7%) Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKG-GSMHMFSTKNGFYGGH--GIVGAQVS 165 YR +LA GVD + + GR GG S G+ G + F +G G VGAQ + Sbjct: 78 YRSRPLLLALGVDVADALGSAMGRAGGYSDGRDIGVVFNFPNPDGASALPMCGGVGAQYT 137 Query: 166 LGTGIAFANKYRRS-------DK-ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G A A +Y R+ DK + VV GDG+ + + IA L +++ IE+ Sbjct: 138 PTAGWAQAIEYYRTVVKDPAYDKALAVVLGGDGSVASNGFWAALTIATTQKLPMLFYIED 197 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV---DGMDIRAVKATMDKAVAYCRAHKGP 274 N + + + + N + S+ G+++ DG D +D A +Y R + P Sbjct: 198 NGFGISVPSTFQTPGGNIAANLGSWQ--GLEIFSGDGTDPAEAARLVDAATSYVRDRRAP 255 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 ++ + R +GHS D Y++ + E DP+ +++ L+ Sbjct: 256 AMLRLTVPRLQGHSFQDTQTYKS-SNVVEAEWARDPLPKLKSYLV 299 >gi|294055734|ref|YP_003549392.1| Transketolase central region [Coraliomargarita akajimensis DSM 45221] gi|293615067|gb|ADE55222.1| Transketolase central region [Coraliomargarita akajimensis DSM 45221] Length = 1007 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 75/307 (24%), Positives = 133/307 (43%), Gaps = 11/307 (3%) Query: 57 RLMLLIRRFEEKAGQLYGMGMV---GGFCHLC-IGQEAVIVGMKMSLTEGDQMITAYREH 112 R LL + + G L ++ G+ H+ +G EA + + + L D YR+ Sbjct: 17 RKSLLSTLWRSRLGDLREQSLIRQGQGWFHISGMGHEA-MAAIAVQLEADDYAFPYYRDR 75 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 LA G+ + ++ S G+ + H S + + VGA + G A+ Sbjct: 76 AFCLARGLSDDDLAMAFYAKRESSSGGRQLTGHFSSRELNIWSHPSPVGAHMLPACGAAW 135 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 + + V G+ + QG+ YE+ A NL +++V+++N+ A+ T+ SR Sbjct: 136 GMQLDGKRNVVYVSTGEASTRQGEFYEAVCFAKERNLPMLFVVQDNRIAISTTTSR---- 191 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 TN GV VDG D+ AV +A+ R +GP + R HS +D Sbjct: 192 TNPLSMGVLNADDWTLVDGCDVDAVAEASARALEQIRGGEGPAFLWCQVERLSNHSSADD 251 Query: 293 AN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 YR E+I M+ D ++ ++RL+ +E + E+E + + ++ FA Sbjct: 252 QRMYRAAEDIAAMQ-ERDVLQLYQQRLIDEGLLTETEAAEMEERLTSDLRSTYRFASGQA 310 Query: 352 EPDPAEL 358 +P+ EL Sbjct: 311 DPEAMEL 317 >gi|297196472|ref|ZP_06913870.1| branched-chain alpha-keto acid decarboxylase [Streptomyces pristinaespiralis ATCC 25486] gi|297153228|gb|EFH32223.1| branched-chain alpha-keto acid decarboxylase [Streptomyces pristinaespiralis ATCC 25486] Length = 676 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/300 (23%), Positives = 123/300 (41%), Gaps = 12/300 (4%) Query: 58 LMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 LMLL R + ++G + G + H+ + + L D + YR+ +LA Sbjct: 24 LMLLSRECDRRSGIVLRQGE--AWFHISSAGHEALAALCELLEPDDLLFPHYRDRALMLA 81 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 G+D +L ++ S G+ S H + G+Q G A+A + R Sbjct: 82 RGMDPEAQARDLMAKEKSHSAGRNMSAHFGHRPGNVFSIASPTGSQCLPAAGAAWAARLR 141 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 S + V GD + QG+ +E+ A L V++++ +N Y + T S Sbjct: 142 GSTQAVVCSIGDASTRQGEFFEALAFAVERALPVVFLVADNGYGISTPTD------TMSP 195 Query: 238 RGVSFNIPGMQ--VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + PG VDG D AV A+A RA +GP ++ R H+ SD ++ Sbjct: 196 HALGLLPPGRTTVVDGADPDAVHTASAAALAAARAGEGPTVLWCRLDRLESHTSSD--DH 253 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R ++ + DPI+ RL +G L++I + + I + + ++ DP Sbjct: 254 RVYRSAADLAALRDPIDLFAARLTAEGVLEDGRLEDIRARLAREIEDVYDRVATEPTADP 313 >gi|86132055|ref|ZP_01050651.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Dokdonia donghaensis MED134] gi|85817389|gb|EAQ38569.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Dokdonia donghaensis MED134] Length = 693 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 66/302 (21%), Positives = 129/302 (42%), Gaps = 35/302 (11%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAE-LTGRQGGISKGKGGSMH 145 G E + + M L D YR+ +LA G+ ++M + L + S G+ H Sbjct: 40 GHEVIQTAIGMQLQPQDYAFPYYRDDSMLLAIGMKPYELMLQVLAKKDDPFSAGRTYYSH 99 Query: 146 MF---STKNGFYGGHGIVGAQVSLGTGIAFANKYRR--SDKIC----------------- 183 K G Q TG+A Y+ S+K+ Sbjct: 100 PSLRDDDKPKIPHQSSATGMQAIPATGVAMGFYYKEGLSEKLSTVLNETENVSSSTEAPF 159 Query: 184 VVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 VVC GD + +G++ E+F +AAL L ++Y++++N + + + + AQ F Sbjct: 160 VVCSLGDASVTEGEIAEAFQMAALKQLPILYLVQDNGWDISANAAETRAQNAFEYAQGFH 219 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE----MLTYRYRGHSMSDPANYRTR 298 + + +DG D T++K + R + P ++ +L + G M R Sbjct: 220 GLEAVTIDGTDFEESYTTLEKVIKTIRTERRPFLVHAKVPLLNHHTSGVRME-----WYR 274 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +++ E +S DP ++ + LL+N + + +++E+ + + + AQ ++P PA+L Sbjct: 275 DDLEEAQS-RDPYPKMIELLLNNGF-DKKEIEEMTAFAKAEVQKDFDKAQQAEDPVPADL 332 Query: 359 YS 360 ++ Sbjct: 333 FT 334 >gi|310822133|ref|YP_003954491.1| 2-oxoisovalerate dehydrogenase complex (E1 component) subunit alpha [Stigmatella aurantiaca DW4/3-1] gi|309395205|gb|ADO72664.1| 2-oxoisovalerate dehydrogenase complex (E1 component), alpha subunit [Stigmatella aurantiaca DW4/3-1] Length = 337 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 17/265 (6%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG---- 102 ++E + + LM+ R EE+ Q+Y G G F G+EA V + M + +G Sbjct: 18 LDRELLVRIHDLMVKARVLEERLIQMYKQGH-GFFWIGGPGEEAFNVPLGMLMKKGQGPA 76 Query: 103 -DQMITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D + YR+ +LA G + + ++ S G+ + H + Sbjct: 77 FDYLHAHYRQSATLLALGEEPIGALRQMKNTATDPYSGGRNFAGHFSKKAWNIAPVSSPI 136 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN------LNVIYV 214 Q ++ G A A K D I +V GD +G F +W+ L ++ + Sbjct: 137 EVQYAIAPGTAMAQKRHGGDGITIVTGGDAGTAEG----DFASCLIWSSRPANPLPILII 192 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 + NN + + T+ +T+ + RG +FNI ++G D + +A+ Y R + P Sbjct: 193 VTNNHWGISTAAEGQHGETHIADRGRAFNIRSKTINGNDPAESYRELKEAMEYVRQERKP 252 Query: 275 IIIEMLTYRYRGHSMSDPANYRTRE 299 ++E R GHS + AN+ T E Sbjct: 253 FLLEARVSRLYGHSSASGANFVTNE 277 >gi|327404440|ref|YP_004345278.1| 3-methyl-2-oxobutanoate dehydrogenase [Fluviicola taffensis DSM 16823] gi|327319948|gb|AEA44440.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Fluviicola taffensis DSM 16823] Length = 724 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 73/331 (22%), Positives = 142/331 (42%), Gaps = 33/331 (9%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI-GQEAVIVGMKMSLTEGDQMIT 107 KE L A+RLM + EK + + H G EA+ + + + L D + Sbjct: 45 KEVLLKAFRLMATAKTLAEKYEA--NKEITAKYVHATSRGHEAIQLAVGLQLKPQDWVSP 102 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKG----------KGGSMHMFSTKNGFYGGH 157 YR+ +L G+ +M ++ ++ G K M ++ G Sbjct: 103 YYRDDSILLGIGMTPYDLMLQVFAKKDDPFSGGRTYYSHPSLKRDDMPKIPHQSSATGMQ 162 Query: 158 GIVGAQVSLG------TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 I +++G TGIA Y+ + + V GD + +G+V E+F +AAL + Sbjct: 163 AIPTTGIAMGIQYKEKTGIA--EDYKGENPVVVCSLGDASCTEGEVSEAFQMAALKQFPI 220 Query: 212 IYVIENNQYAMGTSVSRASAQ--TNFSK--RGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 +Y++++N + + + + AQ T++++ +G+ +DG D T+ + Sbjct: 221 VYLVQDNGWDISANAAETRAQDITHYAQGFKGIEVR----TIDGSDFDLSFQTVQEVFEI 276 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 R + P II GH S R+++ E + DP ++++ + + E Sbjct: 277 VRKERRPFIIHA-KVPLLGHHTSGVRKEWYRDDLEEA-ATRDPYPKLKEII--RELEGEA 332 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 D+ IE VRK+++ E A + ++P P+ + Sbjct: 333 DVINIEAEVRKLVDEDYEKALNAEDPIPSSV 363 >gi|302607839|emb|CBW45750.1| branched-chain alpha-keto acid decarboxylase [Streptomyces pristinaespiralis] Length = 688 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 71/300 (23%), Positives = 123/300 (41%), Gaps = 12/300 (4%) Query: 58 LMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 LMLL R + ++G + G + H+ + + L D + YR+ +LA Sbjct: 36 LMLLSRECDRRSGIVLRQGE--AWFHISSAGHEALAALCELLEPDDLLFPHYRDRALMLA 93 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 G+D +L ++ S G+ S H + G+Q G A+A + R Sbjct: 94 RGMDPEAQARDLMAKEKSHSAGRNMSAHFGHRPGNVFSIASPTGSQCLPAAGAAWAARLR 153 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 S + V GD + QG+ +E+ A L V++++ +N Y + T S Sbjct: 154 GSTQAVVCSIGDASTRQGEFFEALAFAVERALPVVFLVADNGYGISTPTD------TMSP 207 Query: 238 RGVSFNIPGMQ--VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + PG VDG D AV A+A RA +GP ++ R H+ SD ++ Sbjct: 208 HALGLLPPGRTTVVDGADPDAVHTASAAALAAARAGEGPTVLWCRLDRLESHTSSD--DH 265 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R ++ + DPI+ RL +G L++I + + I + + ++ DP Sbjct: 266 RVYRSAADLAALRDPIDLFAARLTAEGVLEDGRLEDIRARLAREIEDVYDRVATEPTADP 325 >gi|284174330|ref|ZP_06388299.1| dehydrogenase E1 component [Sulfolobus solfataricus 98/2] Length = 128 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 1/127 (0%) Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 +R + F IP ++VDGMD+ AV +AV R GP ++ TYR+ GH D YR Sbjct: 1 ERALGFGIPAVEVDGMDVLAVYEVAKEAVDKARKGGGPSLLHCKTYRFFGHFEGDSLVYR 60 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 +EE EM DPI R +L+ N ++ +L +I+ + I +++FA+ P+ Sbjct: 61 DKEE-EEMWRKRDPITLFRDKLVSNDIVNQEELDKIDREAKTEIEQALKFAEESPYPEVE 119 Query: 357 ELYSDIL 363 E +D+ Sbjct: 120 EALTDVF 126 >gi|324518839|gb|ADY47215.1| Pyruvate dehydrogenase E1 component subunit alpha type II [Ascaris suum] Length = 190 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 62/94 (65%), Gaps = 1/94 (1%) Query: 270 AHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 A KGP+++EM TYRY GHS++DP +YRTREE+ E+R D I +++++ +E + Sbjct: 21 AGKGPLMLEMSTYRYGGHSVADPGTSYRTREEVEEVRRTRDAINGFKEKIIPTGLLTEDE 80 Query: 329 LKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 LKEI+ +RK ++ + + A++ KE L +D+ Sbjct: 81 LKEIDKKIRKEVDEAAKMARTGKEATTDLLLTDL 114 >gi|225166286|ref|ZP_03727980.1| transketolase [Opitutaceae bacterium TAV2] gi|224799469|gb|EEG18004.1| transketolase [Opitutaceae bacterium TAV2] Length = 239 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 2/170 (1%) Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 G + + G++H N +G+ +S G+A A + I + FGDG ++ Sbjct: 62 GSPTLAREGNVHHGDPANRSLPMISHLGSMISNVAGLADAQRRSGKPAIGIAIFGDGGSS 121 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS-RASAQTNFSKRGVSFNIPGMQVDGM 252 G ++E+ N+AAL +L V+++IENNQ A T + + A R ++ I G +D Sbjct: 122 TGDIHETLNLAALLSLPVVFIIENNQIAYSTPTNEQYPADVALWTRAAAYGIEGRPLDAT 181 Query: 253 -DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEI 301 D V + + V R PI++E R RGH+ D +Y T ++I Sbjct: 182 ADPVEVARQLSEIVEKVRTTGRPILVEANVLRLRGHAAYDTRDYLTPDQI 231 >gi|108760073|ref|YP_632732.1| 2-oxoisovalerate dehydrogenase complex, E1 component subunit alpha [Myxococcus xanthus DK 1622] gi|108463953|gb|ABF89138.1| 2-oxoisovalerate dehydrogenase complex, E1 component, alpha subunit [Myxococcus xanthus DK 1622] Length = 336 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 17/267 (6%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-- 102 + +E + + LM+ R EE+ Q+Y G G F G+EA V + + + +G Sbjct: 15 APLERELLVRIHDLMVKTRVLEERLIQMYKQGH-GYFWIGGPGEEAFNVSLGLLMKKGQG 73 Query: 103 ---DQMITAYREHGHILACGVDASKIMAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHG 158 D + YR+ G +LA G + + ++ S G+ + H + K Sbjct: 74 PDFDYLHAHYRQSGTLLALGEEPIGSLRQMKNTATDPYSGGRNFAGHYSARKYNVAPVSS 133 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN------LNVI 212 + Q ++ G A K D I +V GD +G F +W+ L ++ Sbjct: 134 PIEVQYAIAPGTAMVQKRHGGDGITIVTGGDAGTAEG----DFASCLVWSSRPANPLPIL 189 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 ++ NN++ + T+ + S RG +F I ++G D + +A+AY R + Sbjct: 190 IIVTNNKWGISTAAEGQHGEQRISDRGKAFGIRSKTINGNDAVEAYTELREAMAYVRTER 249 Query: 273 GPIIIEMLTYRYRGHSMSDPANYRTRE 299 P ++E R GHS + ANY + E Sbjct: 250 KPFLLEANVSRLYGHSSASGANYVSNE 276 >gi|68060708|ref|XP_672343.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56489326|emb|CAI01710.1| hypothetical protein PB300355.00.0 [Plasmodium berghei] Length = 246 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 1/142 (0%) Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 +G+Q+S G +A K + GDG++++G Y + N +++ +++ +NN Sbjct: 8 LGSQLSHAAGCGYALKLDNKKAVAATFCGDGSSSEGDFYAAVNFSSVRQSQTMFICKNNL 67 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YA+ TS+ + R +S + ++VDG D+ A K C P+ +E Sbjct: 68 YAISTSIKDQYRGDGIAPRALSLGVESIRVDGNDLFASYLATKKMRDICVQESKPVFMEF 127 Query: 280 LTYRYRGHSMSDPAN-YRTREE 300 ++YRY HS SD ++ YR +EE Sbjct: 128 MSYRYGHHSTSDDSSLYRPKEE 149 >gi|298242176|ref|ZP_06965983.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Ktedonobacter racemifer DSM 44963] gi|297555230|gb|EFH89094.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Ktedonobacter racemifer DSM 44963] Length = 698 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 113/274 (41%), Gaps = 8/274 (2%) Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQ-GGISKGKGGS 143 C G E + + +L E D + YR+ L D + E R G + G+ Sbjct: 51 CAGHEG-MAAVVAALQENDWLALYYRDLAAWLQRTGDVYGPLREAYSRSTGPMCSGRNMP 109 Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 H S + G VG G+ F+ K S + + GDG + Sbjct: 110 SHYSSRSHRILPGVSEVGGLAPFAGGVGFSLKQHASKDLIMCSTGDGGSATNDFSVLLRQ 169 Query: 204 AALWNLNVIYVIENNQYAMGTS--VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 +A+ L V+ VIE+N +A+ T V A + ++K + +VDG DI A Sbjct: 170 SAVHQLPVLMVIEDNNWAITTPSVVQYAGSLVEWAK---GAGVYAEEVDGTDIMATYEAS 226 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLH 320 + +A R+ +GP+++ + HS S D +YR +EEI DP++ + L+ Sbjct: 227 KRFMARIRSGQGPVLMHLRLGLLDPHSSSTDIKSYRKKEEIALTTETKDPVKNFGRWLVA 286 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 N EGD + + +R ++ + EPD Sbjct: 287 NGHLQEGDPERMRKEIRSELDRVEREVLQEPEPD 320 >gi|257092859|ref|YP_003166500.1| transketolase domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045383|gb|ACV34571.1| Transketolase domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 1120 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 69/302 (22%), Positives = 123/302 (40%), Gaps = 5/302 (1%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 YR M++ R + + G G H+ + L D + YR+ + Sbjct: 16 YRTMVMSREVDLIEQEYTGRGE--AVFHVSGAGHEASAALSPFLGPQDWLHCHYRDKALM 73 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 +A G+ + L + S+G+ + HM + G VG G+A A K Sbjct: 74 MARGIAPQQFFLALFNKDASHSRGRQMNAHMSCPQLRILSLVGPVGNSALQAVGVANAVK 133 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS-RASAQTN 234 + + GDG QG+V E+ A NL V++++++N+ A+ TS + + QT Sbjct: 134 GDADQPVVLCSLGDGMTQQGEVLEALAHAVRENLPVLFLVQDNKLAISTSTTAKTFYQTP 193 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + IP +++G + T VA R + P I+ M R H+ +D Sbjct: 194 AGDASEFYGIPIHRINGRYPQTCLETFATLVAAMRKDRSPAIVIMDVDRLHSHTNADDQR 253 Query: 295 -YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YR+ E+ +++ + DPI + + L + E + ++R + AQ EP Sbjct: 254 IYRSVGELEQVKESGDPIVNL-EIWLKAQGVPEDFFAGLGDSLRADLKIQASLAQRSPEP 312 Query: 354 DP 355 P Sbjct: 313 SP 314 >gi|152997133|ref|YP_001341968.1| transketolase domain-containing protein [Marinomonas sp. MWYL1] gi|150838057|gb|ABR72033.1| Transketolase domain protein [Marinomonas sp. MWYL1] Length = 701 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 124/267 (46%), Gaps = 21/267 (7%) Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKG-GSMHMFST--KNG--FYGGHGIVGAQ 163 YR +++ G+D +++A + GG S G+ G + + + G + G VGAQ Sbjct: 81 YRSRPFVMSLGIDLDEVVASPMAKAGGYSDGRDIGVVCNYPNVDRKGAMLFPMCGGVGAQ 140 Query: 164 VSLGTGIAFANKYRRSD--------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + +G A + Y ++ I V GD + + + + NI+ NL ++ I Sbjct: 141 YTPISGWAQSILYHKNQLNDSSYAGAIAVSMGGDSSMSTNGFWSALNISTTNNLPHLFYI 200 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSF----NIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 E+N Y G SV + QT + + N+ + DG D + +AV Y R+ Sbjct: 201 EDNGY--GISVPQ-EVQTPGGDQVANLKAYKNLKIIDGDGTDPELTPVLIKEAVEYVRSG 257 Query: 272 KGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 KG ++ + R GH+ D Y+ + I + ++ DP+ ++++ LL N + + + + Sbjct: 258 KGTCLLRLKVPRLCGHTFQDTQTYKNEDFIADEQA-RDPLPKLKRYLLDNGFMTADEWHD 316 Query: 332 IEMNVRKIINNSVEFAQSDKEPDPAEL 358 +E + I SV+ A+ ++PDP L Sbjct: 317 LEDECYRDIRLSVDKAKERQQPDPENL 343 >gi|222086759|ref|YP_002545293.1| 2-oxoisovalerate dehydrogenase beta subunit protein [Agrobacterium radiobacter K84] gi|221724207|gb|ACM27363.1| 2-oxoisovalerate dehydrogenase beta subunit protein [Agrobacterium radiobacter K84] Length = 1107 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 114/260 (43%), Gaps = 10/260 (3%) Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L + D + YR+ +LA G+ + + L S G+ S H+ S G Sbjct: 55 LHDDDWLHLHYRDKALMLARGMPIREFFSSLLATGNSHSAGRQMSAHLSSRALNITSIVG 114 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 VG G + A K++ I + C GDG QG+ E+ A V++V+E+N Sbjct: 115 PVGNNALHAVGASAALKHKAGMPIAICCVGDGTTQQGEFLEAVAEAVRGQYPVVFVVEDN 174 Query: 219 QYAMGTSVSRASAQTNFS-KRGVSFNIPGMQV---DGMDIRAVKATMDKAVAYCRAHKGP 274 +++ T R QT F G + + G+ + +G D+ A + KAV + R ++ P Sbjct: 175 SFSIST---RTRKQTFFDLPTGPAPSFYGLDIIRAEGDDLAASREAFRKAVRHSRNNRTP 231 Query: 275 IIIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 ++ + R H+ D YRT++EI E + DP+ +R LL + L +IE Sbjct: 232 SLVVINMERLTDHTNADDQKTYRTQDEI-ENAAYRDPLINLRVALL-KAGIDDTALDKIE 289 Query: 334 MNVRKIINNSVEFAQSDKEP 353 ++ + A+ + P Sbjct: 290 KDLTAEVQAEAALARKEDAP 309 >gi|84625509|ref|YP_452881.1| putative pyruvate dehydrogenase E1 alpha subunit [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575030|ref|YP_001911959.1| pyruvate dehydrogenase E1 component, alpha subunit [Xanthomonas oryzae pv. oryzae PXO99A] gi|84369449|dbj|BAE70607.1| putative pyruvate dehydrogenase E1 alpha subunit [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519482|gb|ACD57427.1| pyruvate dehydrogenase E1 component, alpha subunit [Xanthomonas oryzae pv. oryzae PXO99A] Length = 221 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 1/145 (0%) Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + Q G A + K + ++ V C GDG +++ Y + N A + L +I + NN Sbjct: 3 ISTQCLHAAGSALSFKLQGKPQVAVACCGDGGSSKIDFYAALNSAGAYTLPLILCVINNG 62 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+ S + ++RG++ + +QVDG D+ AV M +A A G +IE Sbjct: 63 WAISVPRSAQTGAQTLAQRGLAGGLQCLQVDGNDLVAVLEAMRQARVRALAGDGGTVIEF 122 Query: 280 LTYRYRGHSMSDPA-NYRTREEINE 303 LTYR H+ +D A YR EE+ + Sbjct: 123 LTYRLSDHTTADDARRYRGEEELKQ 147 >gi|265763011|ref|ZP_06091579.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 2_1_16] gi|263255619|gb|EEZ26965.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 2_1_16] Length = 678 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 80/336 (23%), Positives = 142/336 (42%), Gaps = 19/336 (5%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ +++ Y LM L R +EKA + + G + + + + Sbjct: 1 MKKYDIKTTDEQTLRKWYHLMTLGRALDEKAPAYLLQSLGWSYHAPYAGHDGIQLAIGQV 60 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFY 154 T G D + YR+ +L+ G+ +++ L G G G S H + Sbjct: 61 FTLGEDYLFPYYRDMLTVLSAGMTPEELI--LNGISKATDPGSAGRHMSNHFAKPEWHIE 118 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G+ A Y + + G+ A ++G VYE+ N A+ L VI+V Sbjct: 119 NISSATGTHDLHAAGVGRAMVYYGHKGVAITSHGESATSEGFVYEAINGASNERLPVIFV 178 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPG------MQVDGMDIRAVKATMDKAVAYC 268 ++N Y G SV + N R V+ N G + +G D+ M +A + Sbjct: 179 FQDNGY--GISVPKKDQTAN---RKVADNFSGFKNLRIIHCNGKDVFDSMNAMAEAREFA 233 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 A++ P+I+ R HS SD YR E+ ++ DP+ + R+ LL K +E Sbjct: 234 IANRTPVIVHANCVRIGSHSNSDKHTLYRDENELAYVKEA-DPLMKFRRMLLRYKRLTEE 292 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DL++IE +K + + A + +P P +Y +L Sbjct: 293 DLQQIEAAAKKELAAANRKALAAPDPTPESIYDFVL 328 >gi|150376254|ref|YP_001312850.1| transketolase domain-containing protein [Sinorhizobium medicae WSM419] gi|150030801|gb|ABR62917.1| Transketolase domain protein [Sinorhizobium medicae WSM419] Length = 692 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 16/242 (6%) Query: 91 VIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKG-GSMHMFST 149 +++G++++ D YR +LA GVD + + GR GG S G+ G + + Sbjct: 61 ILLGLQLT-GRHDAACGYYRSRPLLLALGVDPADALGSAMGRAGGYSDGRDIGVVFNYPN 119 Query: 150 KNGFYGGH--GIVGAQVSLGTGIA---------FANKYRRSDKICVVCFGDGAANQGQVY 198 +G G VG+Q + G A N+ R D I VV GDG+ + Sbjct: 120 PDGASALPMCGGVGSQYTPTAGWAQAITYFNQVLGNEEYRED-IAVVLGGDGSVASNGFW 178 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAV 257 + IA L +++ IE+N + + S + + N + + N+ + DG D Sbjct: 179 SALTIATTQGLPLLFYIEDNGFGISVPSSFQTPEGNIAGNLAGWKNLTVLDGDGSDPAEA 238 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 AV R + P+++ + R GHS D Y++ EE+ + HDP+ ++R Sbjct: 239 ARLTKSAVERVREGRMPVLLRLEVPRLEGHSFQDTQAYKS-EELVKSEWAHDPLPRLRDH 297 Query: 318 LL 319 L+ Sbjct: 298 LV 299 >gi|53712912|ref|YP_098904.1| 2-oxoisovalerate dehydrogenase subunit beta [Bacteroides fragilis YCH46] gi|52215777|dbj|BAD48370.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides fragilis YCH46] Length = 678 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 80/336 (23%), Positives = 142/336 (42%), Gaps = 19/336 (5%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ +++ Y LM L R +EKA + + G + + + + Sbjct: 1 MKKYDIKTTDEQTLRKWYHLMTLGRALDEKAPAYLLQSLGWSYHAPYAGHDGIQLAIGQV 60 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFY 154 T G D + YR+ +L+ G+ +++ L G G G S H + Sbjct: 61 FTLGEDYLFPYYRDMLTVLSAGMTPEELI--LNGISKATDPGSAGRHMSNHFAKPEWHIE 118 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G+ A Y + + G+ A ++G VYE+ N A+ L VI+V Sbjct: 119 NISSATGTHDLHAAGVGRAMVYYGHKGVAITSHGESATSEGFVYEAINGASNERLPVIFV 178 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPG------MQVDGMDIRAVKATMDKAVAYC 268 ++N Y G SV + N R V+ N G + +G D+ M +A + Sbjct: 179 FQDNGY--GISVPKKDQTAN---RKVADNFSGFKNLRIIHCNGKDVFDSMNAMTEAREFA 233 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 A++ P+I+ R HS SD YR E+ ++ DP+ + R+ LL K +E Sbjct: 234 IANRTPVIVHANCVRIGSHSNSDKHTLYRDENELAYVKEA-DPLMKFRRMLLRYKRLTEE 292 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DL++IE +K + + A + +P P +Y +L Sbjct: 293 DLQQIEAAAKKELAAANRKALAAPDPIPESIYDFVL 328 >gi|60681130|ref|YP_211274.1| putative 2-oxoisovalerate dehydrogenase, alpha and beta subunits [Bacteroides fragilis NCTC 9343] gi|253563101|ref|ZP_04840558.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 3_2_5] gi|60492564|emb|CAH07336.1| putative 2-oxoisovalerate dehydrogenase, alpha and beta subunits [Bacteroides fragilis NCTC 9343] gi|251946877|gb|EES87159.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides sp. 3_2_5] Length = 678 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 80/336 (23%), Positives = 142/336 (42%), Gaps = 19/336 (5%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ +++ Y LM L R +EKA + + G + + + + Sbjct: 1 MKKYDIKTTDEQTLRKWYHLMTLGRALDEKAPAYLLQSLGWSYHAPYAGHDGIQLAIGQV 60 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFY 154 T G D + YR+ +L+ G+ +++ L G G G S H + Sbjct: 61 FTLGEDYLFPYYRDMLTVLSAGMTPEELI--LNGISKATDPGSAGRHMSNHFAKPEWHIE 118 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G+ A Y + + G+ A ++G VYE+ N A+ L VI+V Sbjct: 119 NISSATGTHDLHAAGVGRAMVYYGHKGVAITSHGESATSEGFVYEAINGASNERLPVIFV 178 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPG------MQVDGMDIRAVKATMDKAVAYC 268 ++N Y G SV + N R V+ N G + +G D+ M +A + Sbjct: 179 FQDNGY--GISVPKKDQTAN---RKVADNFSGFKNLRIIHCNGKDVFDSMNAMTEAREFA 233 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 A++ P+I+ R HS SD YR E+ ++ DP+ + R+ LL K +E Sbjct: 234 IANRTPVIVHANCVRIGSHSNSDKHTLYRDENELAYVKEA-DPLMKFRRMLLRYKRLTEE 292 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DL++IE +K + + A + +P P +Y +L Sbjct: 293 DLQQIEAAAKKELAAANRKALAAPDPIPESIYDFVL 328 >gi|324524216|gb|ADY48374.1| 2-oxoisovalerate dehydrogenase subunit alpha [Ascaris suum] Length = 148 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 2/143 (1%) Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G A+A K ++ ++ +V +GDGAA++G + ++ A V++ NN YA+ T S Sbjct: 6 GSAYAFKRAKNGRVVIVYYGDGAASEGDAHAAYGFAGTLKCPVVFFCRNNGYAISTPTSE 65 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + G + ++VDG D AV + KA P++IE +TYR HS Sbjct: 66 QYGGDGIASMGPPHALNTIRVDGNDFFAVY-NVTKAAREMALQNQPVMIEAMTYRAGHHS 124 Query: 289 MSDPAN-YRTREEINEMRSNHDP 310 SD + YR+REE+ +S +P Sbjct: 125 TSDDSTLYRSREEVMTWKSKENP 147 >gi|52545799|emb|CAH56215.1| hypothetical protein [Homo sapiens] Length = 403 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 3/232 (1%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ L Y+ M L+ + + G + F G+E VG +L Sbjct: 93 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNT 151 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + YRE G ++ MA+ G + KG+ +H + F + Sbjct: 152 DLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLAT 211 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ G A+A K ++++ + FG+GAA++G + FN AA +I+ NN YA+ Sbjct: 212 QIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAI 271 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 T S + RG + I ++VDG D+ AV A RA GP Sbjct: 272 STPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATGGPKA--RASVGP 321 >gi|168001944|ref|XP_001753674.1| predicted protein [Physcomitrella patens subsp. patens] gi|162695081|gb|EDQ81426.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1041 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 97/183 (53%), Gaps = 8/183 (4%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N RS + ++ GDG+ + QG VYE+ +++ L N + I+++ NNQ A T Sbjct: 404 YSNDKDRSKNMAILLHGDGSFSGQGVVYETLHLSDLPNYTIGGTIHIVVNNQVAFTTDPK 463 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + N P V+G D+ AV + A + K ++++++ YR GH Sbjct: 464 SSRSSPYCTDVAKALNAPIFHVNGDDVEAVVHACELAAEWRHKFKADVVVDIVCYRRFGH 523 Query: 288 SMSDPANYRTREEINEMRSNHDP-IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + D ++ T+ + ++ NH P ++ KRL+ K S+ ++ +++ NV +I+N EF Sbjct: 524 NEIDEPSF-TQPTMYKVIRNHPPALDSYMKRLIDEKHLSQEEVSDLQNNVFRILNE--EF 580 Query: 347 AQS 349 +S Sbjct: 581 DKS 583 >gi|149371903|ref|ZP_01891222.1| (pyruvate) Oxoisovalerate Dehydrogenase Alpha and Beta Fusion [unidentified eubacterium SCB49] gi|149355043|gb|EDM43604.1| (pyruvate) Oxoisovalerate Dehydrogenase Alpha and Beta Fusion [unidentified eubacterium SCB49] Length = 693 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 70/322 (21%), Positives = 136/322 (42%), Gaps = 57/322 (17%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQ-----GGISKGKG 141 G E + + M L D M YR+ +LA G+ ++M ++ ++ GG + Sbjct: 22 GHEIIQTAVGMQLQPQDYMFPYYRDDSMLLAIGMTPYELMLQVLAKKDDPFSGGRTYYSH 81 Query: 142 GSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI------------------- 182 S++ K G Q TG+A YR + Sbjct: 82 PSLNDID-KPKIPHQSSATGMQAIPATGVALGFHYREGGNVKANNTQYSSIVEELANVDG 140 Query: 183 ------------------CVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VVC GD + +G++ E+F +AAL L ++Y++++N + + Sbjct: 141 VYNQKVHTQDARLDGNAPVVVCSLGDASVTEGEIAEAFQMAALKQLPILYLVQDNGWDIS 200 Query: 224 TSVSRASAQTNFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE---- 278 + + AQ N ++ F+ + + +DG D T+++ + R + P ++ Sbjct: 201 ANEAETRAQ-NAAEYAAGFHGLESVSIDGTDFEESYKTINQVIEKIRTERRPFLVHAKVP 259 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 +L + G M R++++E RS DP ++ K LL + SE ++ EIE + Sbjct: 260 LLNHHTSGVRME-----FYRDDLDEARS-RDPYPKMLK-LLSDYNVSEKEIGEIETEIGN 312 Query: 339 IINNSVEFAQSDKEPDPAELYS 360 + +S++ A ++P PA+L++ Sbjct: 313 EVRSSLDRALEAEDPKPADLFT 334 >gi|255008422|ref|ZP_05280548.1| putative 2-oxoisovalerate dehydrogenase, alpha and beta subunits [Bacteroides fragilis 3_1_12] gi|313146148|ref|ZP_07808341.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides fragilis 3_1_12] gi|313134915|gb|EFR52275.1| 2-oxoisovalerate dehydrogenase beta subunit [Bacteroides fragilis 3_1_12] Length = 678 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 80/336 (23%), Positives = 141/336 (41%), Gaps = 19/336 (5%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ +++ Y LM L R +EKA + + G + + + + Sbjct: 1 MKKYDIKTTDEQTLRKWYHLMTLGRALDEKAPAYLLQSLGWSYHAPYAGHDGIQLAIGQV 60 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFY 154 T G D + YR+ +L+ G+ +++ L G G G S H + Sbjct: 61 FTLGEDYLFPYYRDMLTVLSAGMTPEELI--LNGISKATDPGSAGRHMSNHFAKPEWHIE 118 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G+ A Y + + G+ A ++G VYE+ N A+ L VI+V Sbjct: 119 NISSATGTHDLHAAGVGRAMVYYGHKGVAITSHGESATSEGFVYEAINGASNERLPVIFV 178 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPG------MQVDGMDIRAVKATMDKAVAYC 268 ++N Y G SV + N R V+ N G + +G D+ M +A + Sbjct: 179 FQDNGY--GISVPKKDQTAN---RKVADNFSGFKNLRIIHCNGKDVFDSMNAMTEAREFA 233 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 A++ P+I+ R HS SD YR E+ ++ DP+ + R+ LL K +E Sbjct: 234 IANRTPVIVHANCVRIGSHSNSDKHTLYRDENELAYVKEA-DPLMKFRRMLLRYKRLTEE 292 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DL +IE +K + + A + +P P +Y +L Sbjct: 293 DLLQIEAAAKKELAAANRKALAAPDPKPESIYDFVL 328 >gi|189468403|ref|ZP_03017188.1| hypothetical protein BACINT_04800 [Bacteroides intestinalis DSM 17393] gi|189436667|gb|EDV05652.1| hypothetical protein BACINT_04800 [Bacteroides intestinalis DSM 17393] Length = 678 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 81/314 (25%), Positives = 137/314 (43%), Gaps = 9/314 (2%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 Y LM L R +EKA + F G + + + + T+G D + YR+ Sbjct: 18 YYLMTLGRALDEKAPAYLLQSLGWSFHAPYAGHDGIQLAIGQVFTKGEDFLFPYYRDMLT 77 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 L+ G+ A +++ L G G GG S H + G G+A Sbjct: 78 ALSAGMTAEELI--LNGISKATDPGSGGRHMSNHFAKPEWHIENISSATGTHDLHAAGVA 135 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A Y + + G+ A+++G VYE+ N A+L L VI+V ++N Y + +A Sbjct: 136 RAMVYYDHKGVVITSHGESASSEGFVYEAVNGASLERLPVIFVWQDNGYGISVPKKDQTA 195 Query: 232 QTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + F N+ + +G D+ M +A Y ++ P+I+ R HS S Sbjct: 196 ARKVADNFSGFKNLKIIHCNGKDVFDSMNAMTEAREYALLNRNPVIVHANCVRIGSHSNS 255 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D YR E+ ++ DP+ + R+ LL K +E +LKEIE +K + + A + Sbjct: 256 DKDTLYRDENELAYVKEA-DPLLKFRRMLLRYKRLTEEELKEIEEKAKKDLAAANRKALT 314 Query: 350 DKEPDPAELYSDIL 363 +PDP +++ +L Sbjct: 315 APDPDPKTIFNYVL 328 >gi|87240847|gb|ABD32705.1| Pyruvate dehydrogenase E1 component alpha subunit, putative [Medicago truncatula] Length = 104 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 3/89 (3%) Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G S RA++ K+G +F +PG+ VDGMD+ V+ +A+ R +GP +IE Sbjct: 16 WAIGMSHLRATSDPQIWKKGPTFGMPGVHVDGMDVLKVRQVAKEAIGRARRGEGPTLIEC 75 Query: 280 LTYRYRGHSMSDP---ANYRTREEINEMR 305 TYR+RGHS++DP N R+ I+ ++ Sbjct: 76 ETYRFRGHSLADPDELCNPAGRDPISSLK 104 >gi|301166524|emb|CBW26100.1| putative 2-oxoisovalerate dehydrogenase, alpha and beta subunits [Bacteriovorax marinus SJ] Length = 682 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 75/319 (23%), Positives = 127/319 (39%), Gaps = 19/319 (5%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAV--IVGMKMSLTEGDQMITAYREHG 113 Y LM + R + +A + + G +A+ +G +L E D + YR+ Sbjct: 23 YTLMTVGRLIDLRAPNYLKQAIGWSYHAPYAGHDAIQLAIGQVFTLNE-DHLFPYYRDML 81 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 L+ G A +++ L G GG S H + + G G+ Sbjct: 82 TALSAGCTAEELI--LNGISKATDLASGGRHMSNHFAKPEWNIHNVSSCTGNHTLHAVGV 139 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 A A K + + G+ + ++G YE+ N A+ L V++V ++N Y G SV + Sbjct: 140 ARAMKKYDHKGVAISSQGESSVSEGYCYEAINGASREKLPVVFVFQDNGY--GISVPK-- 195 Query: 231 AQTNFSKRGVSFNIPGMQ------VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + V+ N G++ DG D+ M A + + P+I+ R Sbjct: 196 -EVQCANEFVADNFTGLKNLRIIHCDGKDVFDSMNAMKAARQHALENSEPVIVHAECVRM 254 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 HS SD E+ E DP RK L+ K ++ +L EI+ +K + + Sbjct: 255 GSHSNSDKHELYRDEKEREEAIAKDPYAAFRKLLIKEKIFTDKELTEIDDESKKTVLEAH 314 Query: 345 EFAQSDKEPDPAELYSDIL 363 A PDPA +Y +L Sbjct: 315 SAAMKAPNPDPASIYDFVL 333 >gi|301162618|emb|CBW22165.1| putative 2-oxoisovalerate dehydrogenase, alpha and beta subunits [Bacteroides fragilis 638R] Length = 678 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 79/336 (23%), Positives = 141/336 (41%), Gaps = 19/336 (5%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 ++ +++ +++ Y LM L R +EKA + + G + + + + Sbjct: 1 MKKYDIKTTDEQTLRKWYHLMTLGRALDEKAPAYLLQSLGWSYHAPYAGHDGIQLAIGQV 60 Query: 99 LTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFY 154 T G D + YR+ +L+ G+ +++ L G G G S H + Sbjct: 61 FTLGEDYLFPYYRDMLTVLSAGMTPEELI--LNGISKATDPGSAGRHMSNHFAKPEWHIE 118 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G+ A Y + + G+ A ++G VYE+ N A+ L VI+V Sbjct: 119 NISSATGTHDLHAAGVGRAMVYYGHKGVAITSHGESATSEGFVYEAINGASNERLPVIFV 178 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPG------MQVDGMDIRAVKATMDKAVAYC 268 ++N Y G SV + N R V+ N G + +G D+ M +A + Sbjct: 179 FQDNGY--GISVPKKDQTAN---RKVADNFSGFKNLRIIHCNGKDVFDSMNAMTEAREFA 233 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 A++ P+I+ R HS SD YR E+ ++ DP+ + R+ LL K + Sbjct: 234 IANRTPVIVHANCVRIGSHSNSDKHTLYRDENELAYVKEA-DPLMKFRRMLLRYKRLTAE 292 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DL++IE +K + + A + +P P +Y +L Sbjct: 293 DLQQIEAAAKKELAAANRKALAAPDPIPESIYDFVL 328 >gi|54289531|gb|AAV32072.1| pyruvate dehydrogenase E1 alpha subunit [Nyctotherus ovalis] Length = 136 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 11/125 (8%) Query: 22 SAKRAATSSVDCVDIPFLEGFEV--------SEFNKEQELSAYRLMLLIRRFEEKAGQLY 73 SA+ A+T + +P E F + ++ N+++ L Y M RR E ++Y Sbjct: 15 SARFASTVEIK---LPQYEVFNLDKSILPTKAQTNRDEMLKYYHDMNFQRRVEIMCDEIY 71 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQ 133 V GFCHL GQEAV VG++ +T+ D +ITAYR HG +L G A++++AE+ G+ Sbjct: 72 KKKEVRGFCHLMDGQEAVSVGVEAGITKEDHLITAYRCHGVLLGRGETAARLIAEMMGKA 131 Query: 134 GGISK 138 G SK Sbjct: 132 TGASK 136 >gi|307316839|ref|ZP_07596281.1| Transketolase domain protein [Sinorhizobium meliloti AK83] gi|306897461|gb|EFN28205.1| Transketolase domain protein [Sinorhizobium meliloti AK83] Length = 692 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 13/219 (5%) Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKG-GSMHMFSTKNGFYGGH--GIVGAQVS 165 YR +LA GVD + + GR GG S G+ G + + +G G VG Q + Sbjct: 78 YRSRPLLLALGVDPADALGSAMGRAGGYSDGRDIGVVFNYPNPHGASALPMCGGVGTQYT 137 Query: 166 LGTGIAFANKY--------RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G A A Y I VV GDG+ + + IA L +++ IE+ Sbjct: 138 PTAGWAQAITYFSEVLGKEEYQKDIAVVLGGDGSVASNGFWSALTIATTQGLPLLFYIED 197 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + S + + N + + N+ + DG D AV R + P++ Sbjct: 198 NGFGISVPSSFQTPEGNIAGNLAGWKNLTVLDGDGSDPEEAARLTKGAVELVREGRMPVL 257 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVR 315 + + R GHS D Y++ EE+ HDP+ ++R Sbjct: 258 LRLEVPRLEGHSFQDTQTYKS-EELVRSEWAHDPLPRLR 295 >gi|54289525|gb|AAV32069.1| pyruvate dehydrogenase E1 alpha subunit [Nyctotherus ovalis] Length = 135 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 8/118 (6%) Query: 29 SSVDCVDIPFLEGF--------EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 +S + +P E F + + ++ L YR M RR E ++Y V G Sbjct: 18 ASTATIKLPEYEVFNLDKSALPKTASTTSDEMLRYYREMNFQRRVEIMCDEIYKKKEVRG 77 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK 138 FCHL GQEAV VG++ +T+ D +ITAYR HG +L G A +++AE+ G+ G SK Sbjct: 78 FCHLMDGQEAVSVGVEAGITKDDHLITAYRCHGVLLGRGETADRLLAEMMGKSTGASK 135 >gi|16263771|ref|NP_436563.1| putative pyruvate dehydrogenase E1 component,alpha and beta subunits protein [Sinorhizobium meliloti 1021] gi|15139895|emb|CAC48423.1| pyruvate dehydrogenase (acetyl-transferring) [Sinorhizobium meliloti 1021] Length = 692 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 13/219 (5%) Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKG-GSMHMFSTKNGFYGGH--GIVGAQVS 165 YR +LA GVD + + GR GG S G+ G + + +G G VG Q + Sbjct: 78 YRSRPLLLALGVDPADALGSAMGRAGGYSDGRDIGVVFNYPNPHGASALPMCGGVGTQYT 137 Query: 166 LGTGIAFANKY--------RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G A A Y I VV GDG+ + + IA L +++ IE+ Sbjct: 138 PTAGWAQAITYFSEVLGKEEYQKDIAVVLGGDGSVASNGFWSALTIATTQGLPLLFYIED 197 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + S + + N + + N+ + DG D AV R + P++ Sbjct: 198 NGFGISVPSSFQTPEGNIAGNLAGWKNLTVLDGDGSDPEEAARLTKGAVELVREGRMPVL 257 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVR 315 + + R GHS D Y++ EE+ HDP+ ++R Sbjct: 258 LRLEVPRLEGHSFQDTQTYKS-EELVRSEWAHDPLPRLR 295 >gi|307301436|ref|ZP_07581196.1| Transketolase domain protein [Sinorhizobium meliloti BL225C] gi|306903493|gb|EFN34081.1| Transketolase domain protein [Sinorhizobium meliloti BL225C] Length = 692 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 13/219 (5%) Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKG-GSMHMFSTKNGFYGGH--GIVGAQVS 165 YR +LA GVD + + GR GG S G+ G + + +G G VG Q + Sbjct: 78 YRSRPLLLALGVDPADALGSAMGRAGGYSDGRDIGVVFNYPNPHGASALPMCGGVGTQYT 137 Query: 166 LGTGIAFANKY--------RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G A A Y I VV GDG+ + + IA L +++ IE+ Sbjct: 138 PTAGWAQAITYFSEVLGKEEYQKDIAVVLGGDGSVASNGFWSALTIATTQGLPLLFYIED 197 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + S + + N + + N+ + DG D AV R + P++ Sbjct: 198 NGFGISVPSSFQTPEGNIAGNLAGWKNLTVLDGDGSDPEEAARLTKGAVELVREGRMPVL 257 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVR 315 + + R GHS D Y++ EE+ HDP+ ++R Sbjct: 258 LRLEVPRLEGHSFQDTQTYKS-EELVRSEWAHDPLPRLR 295 >gi|56695497|ref|YP_165845.1| dehydrogenase/transketolase family protein [Ruegeria pomeroyi DSS-3] gi|56677234|gb|AAV93900.1| dehydrogenase/transketolase family protein [Ruegeria pomeroyi DSS-3] Length = 740 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 87/339 (25%), Positives = 131/339 (38%), Gaps = 28/339 (8%) Query: 47 FNKEQELSAYRLMLLIR------RFEEKAGQ-LYGMGMVG--GFCHLCIGQEAVIVGMKM 97 + Q +S YR +L R R +KAGQ Y +G G G + + Sbjct: 40 LTQAQAVSLYRAQVLSRALDRTSRAMQKAGQGFYTIGSSGHEGMAAVAQALRPTDIAFLH 99 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 Q+ A + G +A + S ++ GG K G M + H Sbjct: 100 YRDAAFQIARAEQVPGQQIAWDMLLSFACSKEDPASGGRHKVLGSKALMIPPQTSTIASH 159 Query: 158 --GIVGAQVSLGTGIAFANKYRR--SDKICVVCFGDGAANQGQVYESFNIAALWN----- 208 VGA SLG ++R+ D I + FGD +AN + N A W Sbjct: 160 LPKAVGAAYSLGAARRHPPEHRQLPEDGIAMCSFGDASANHSTAQGAINTAG-WTSVQSI 218 Query: 209 -LNVIYVIENNQYAMGTSVSRASAQTNFSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVA 266 L +++V E+N + T R Q + R G+ + Q +G+DI A +A Sbjct: 219 PLPLLFVCEDNGIGISTKTPRGWIQASMEHRPGIRY----FQANGLDIYETYAVAQEAAD 274 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDP-IEQVRKRLLHNKWA 324 Y R + P + + T R GH+ +D P Y TR E+ E DP + VR A Sbjct: 275 YVRNRRKPAFLHLKTVRLYGHAGADVPTTYLTRAEV-EAEEAMDPLLHSVRLLAEDGALA 333 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 SE L E +I +VE A AE+ + ++ Sbjct: 334 SEEALAIYEQTCARIDRIAVEAATRPHLASAAEVAASLI 372 >gi|261349314|gb|ACX71217.1| putative pyruvate dehydrogenase E1 component [Streptococcus suis] Length = 89 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 1/88 (1%) Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 +D I + GD A N+G +ES N+AA+WNL VI+ I NN+Y + T +S ++ + +R Sbjct: 1 TDNIVIAFSGDSATNEGSFHESMNLAAVWNLPVIFFITNNRYGISTDISYSTKIPHLYQR 60 Query: 239 GVSFNIPGMQV-DGMDIRAVKATMDKAV 265 ++ IPG V DG D+ AV M + + Sbjct: 61 AAAYGIPGHYVEDGNDVIAVYEKMQEVI 88 >gi|58583700|ref|YP_202716.1| pyruvate dehydrogenase E1 alpha subunit [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428294|gb|AAW77331.1| pyruvate dehydrogenase E1 alpha subunit [Xanthomonas oryzae pv. oryzae KACC10331] Length = 222 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 2/146 (1%) Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + Q G A + K + ++ V C GDG +++ Y + N A + L +I + NN Sbjct: 3 ISTQCLHAAGSALSFKLQGKPQVAVACCCGDGGSSKIDFYAALNSAGAYTLPLILCVINN 62 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +A+ S + ++RG++ + +QVDG D+ AV M +A A G +IE Sbjct: 63 GWAISVPRSAQTGAQTLAQRGLAGGLQCLQVDGNDLVAVLEAMRQARVRALAGDGGTVIE 122 Query: 279 MLTYRYRGHSMSDPA-NYRTREEINE 303 LTYR H+ +D A YR EE+ + Sbjct: 123 FLTYRLSDHTTADDARRYRGEEELKQ 148 >gi|303286695|ref|XP_003062637.1| predicted protein [Micromonas pusilla CCMP1545] gi|226456154|gb|EEH53456.1| predicted protein [Micromonas pusilla CCMP1545] Length = 1067 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 15/225 (6%) Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA---FANKYRRSDKICVVCFGDGA-ANQG 195 +GG MH+ N H V +G A + N R + V+ GDGA + QG Sbjct: 399 RGGRMHLSLVANP---SHLEAVNTVVIGKARAKQFYENDVERGKHMAVLLHGDGAFSGQG 455 Query: 196 QVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRASAQTNFSKRGVSFNIPGMQVD 250 VYE+ +++ L + ++V+ NNQ A T SR+S +G+ NIP V+ Sbjct: 456 IVYETLDMSQLPEYTIGGTLHVVVNNQVAFTTDPKYSRSSPYCTDVAKGI--NIPVFHVN 513 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDP 310 G D+ AV M+ A+ + + K ++++++ YR GH+ D + ++ + Sbjct: 514 GDDVEAVARVMELAIEWRQQWKQDVVVDIVCYRKYGHNEIDEPMFTQPLMYKAIKKHPSA 573 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 +Q ++L+ + + GD+K + +V K + S E ++ D P P Sbjct: 574 HQQYAEKLMGDGTLTPGDVKLVHDSVLKTLEESFEDSK-DYVPKP 617 >gi|54289529|gb|AAV32071.1| pyruvate dehydrogenase E1 alpha subunit [Nyctotherus ovalis] Length = 136 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 10/125 (8%) Query: 22 SAKRAATSSVDCVDIPFLEGFEVSE--------FNKEQELSAYRLMLLIRRFEEKAGQLY 73 SA R A S+V+ V +P E F + + +++ L Y M RR E ++Y Sbjct: 14 SAARFA-STVE-VKLPQYEVFNLDKSVLPTKATTTRDELLKCYHEMNFQRRVEIMCDEIY 71 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQ 133 V GFCHL GQEAV VG++ +T+ D +ITAYR HG +L G A++++AE+ G+ Sbjct: 72 KKKEVRGFCHLMDGQEAVSVGVEAGITKEDHIITAYRCHGMLLGRGETAARLIAEMMGKA 131 Query: 134 GGISK 138 G SK Sbjct: 132 TGASK 136 >gi|224100929|ref|XP_002312072.1| predicted protein [Populus trichocarpa] gi|222851892|gb|EEE89439.1| predicted protein [Populus trichocarpa] Length = 1021 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 5/186 (2%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + ++ GDG+ A QG VYE+ +++AL N I+++ NNQ A T Sbjct: 383 YSNDSDRTKNMGILIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPR 442 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + N P V+G D+ AV + A + + ++++++ YR GH Sbjct: 443 AGRSSQYCTDVAKALNAPIFHVNGDDMEAVVRVCELAAEWRQTFHSDVVVDLVCYRRFGH 502 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D ++ + +R++ +E +K+LL + +E D+ I+ V I+N A Sbjct: 503 NEIDEPSFTQPKMYQVIRNHPSALEIYKKKLLESGQVTEEDISRIQEKVLSILNEEF-LA 561 Query: 348 QSDKEP 353 D P Sbjct: 562 SKDYVP 567 >gi|225449605|ref|XP_002279332.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1000 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 91/187 (48%), Gaps = 5/187 (2%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ I V+ GDG+ A QG VYE+ +++AL N I+++ NNQ A T Sbjct: 362 YSNDLDRTKNIGVLIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPR 421 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + N P V+G D+ AV + A + + ++++++ YR GH Sbjct: 422 SGRSSQYCTDVAKALNAPIFHVNGDDMEAVVHVCELAAEWRQTFHSDVVVDVVCYRRFGH 481 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D ++ + +R++ +E +K+LL A++ D+ ++ V I+N A Sbjct: 482 NEIDEPSFTQPKMYKVIRNHPSALEIYQKKLLELGQATQEDIDRVQNKVNTILNEEF-LA 540 Query: 348 QSDKEPD 354 D P+ Sbjct: 541 SKDYVPN 547 >gi|224109580|ref|XP_002315242.1| predicted protein [Populus trichocarpa] gi|222864282|gb|EEF01413.1| predicted protein [Populus trichocarpa] Length = 1021 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 5/186 (2%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + ++ GDG+ A QG VYE+ +++AL N I+++ NNQ A T Sbjct: 383 YSNDSDRTKNMGILIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPR 442 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + N P V+G D+ AV + A + + ++++++ YR GH Sbjct: 443 AGRSSQYCTDVAKALNAPIFHVNGDDMEAVVHVCELAAEWRQTFHSDVVVDLVCYRRFGH 502 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D ++ + +R++ +E +K+LL + +E D+ I+ V I+N A Sbjct: 503 NEIDEPSFTQPKMYQVIRNHPSALEIYKKKLLESGQVTEEDISRIQEKVLSILNEEF-LA 561 Query: 348 QSDKEP 353 D P Sbjct: 562 SKDYVP 567 >gi|168705031|ref|ZP_02737308.1| 2-oxoisovalerate dehydrogenase complex, E1 component, alpha subunit [Gemmata obscuriglobus UQM 2246] Length = 376 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 71/295 (24%), Positives = 120/295 (40%), Gaps = 45/295 (15%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMG----MVGGFCHLCIGQEAVIVGMKMSLTEG--- 102 E L+ +R ML R EE++ ++ G +GG G+EA V + + + G Sbjct: 39 EVALTVFRQMLRTRALEERSIKMSKSGEAYFWIGG-----PGEEAFNVCLGLQINRGRGP 93 Query: 103 --DQMITAYREHGHILACG---VDASKIMA-ELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 D + YR G +LA G +D ++ +A T R S+G+ H + Sbjct: 94 AHDYLHLHYRNAGVMLAMGMPMIDHTRQLAMRATDRH---SRGRNFVGHYAVPEWNVVPV 150 Query: 157 HGIVGAQVSLGTGIAFANKYR------RSDKICVVCFGDGAANQGQVYESFNIAALWN-- 208 ++ Q ++ G A K ++ I VV G+ +G N W+ Sbjct: 151 TSVIEVQFAMAPGTALVQKRHGLKNPAEAEGITVVVGGEAGTAEGDFESCLN----WSTR 206 Query: 209 ----LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 L V+ V+ NN Y + T + A + R + + + ++G D A +D+A Sbjct: 207 PGNELPVLMVVTNNNYGISTDLGTVHAHRPIADRAIPYGVRCETINGNDPVAAWHGIDRA 266 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 + YCR + P ++E + R GHS S A E DPI ++L+ Sbjct: 267 MRYCRRERKPYLLEAVVSRLHGHSSSSGAQRNWTEA--------DPIAAFEQKLI 313 >gi|296086274|emb|CBI31715.3| unnamed protein product [Vitis vinifera] Length = 899 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 91/187 (48%), Gaps = 5/187 (2%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ I V+ GDG+ A QG VYE+ +++AL N I+++ NNQ A T Sbjct: 298 YSNDLDRTKNIGVLIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPR 357 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + N P V+G D+ AV + A + + ++++++ YR GH Sbjct: 358 SGRSSQYCTDVAKALNAPIFHVNGDDMEAVVHVCELAAEWRQTFHSDVVVDVVCYRRFGH 417 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D ++ + +R++ +E +K+LL A++ D+ ++ V I+N A Sbjct: 418 NEIDEPSFTQPKMYKVIRNHPSALEIYQKKLLELGQATQEDIDRVQNKVNTILNEEF-LA 476 Query: 348 QSDKEPD 354 D P+ Sbjct: 477 SKDYVPN 483 >gi|42558168|dbj|BAD11091.1| E1 component of 2-oxo acid dehydrogenase [Moorella thermoacetica] Length = 174 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 73/159 (45%), Gaps = 3/159 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 L Y MLL R+ +E+ + G + F C GQEA VG +L D ++ YR+ Sbjct: 17 LEMYETMLLARKLDERMWLVNRAGKIP-FVISCQGQEAAQVGAAFALDRTKDYVLPYYRD 75 Query: 112 HGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 G +L G+ A ++M A + S G+ H KN G V QV G Sbjct: 76 MGVVLTFGMTARELMLAAFAKAEDPNSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGF 135 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL 209 A A K + D + V FG+G++NQG +E N A + L Sbjct: 136 ALAAKMEKKDFVAFVTFGEGSSNQGDFHEGANFAGVHKL 174 >gi|42558174|dbj|BAD11096.1| E1 component of 2-oxo acid dehydrogenase [Geobacillus thermocatenulatus] Length = 173 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 71/156 (45%), Gaps = 3/156 (1%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYRE 111 L Y MLL R+ +E+ L G + F C GQEA VG +L D ++ YR+ Sbjct: 17 LEMYETMLLARKLDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDRTKDYVLPYYRD 75 Query: 112 HGHILACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 G +L G+ ++M A + S G+ H KN G V QV G Sbjct: 76 MGVVLTFGMTPRELMLAAFAKAEDPNSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGF 135 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 A A K + D + V FG+G++NQG +E N A + Sbjct: 136 ALAAKMEKKDFVAFVTFGEGSSNQGDFHEGANFAGV 171 >gi|115378157|ref|ZP_01465331.1| branched chain keto acid dehydrogenase (E1) alpha subunit [Stigmatella aurantiaca DW4/3-1] gi|21733727|emb|CAD27919.1| branched chain keto acid dehydrogenase (E1) alpha subunit [Stigmatella aurantiaca DW4/3-1] gi|115364831|gb|EAU63892.1| branched chain keto acid dehydrogenase (E1) alpha subunit [Stigmatella aurantiaca DW4/3-1] Length = 295 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 21/241 (8%) Query: 71 QLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-----DQMITAYREHGHILACGVDASKI 125 Q +G +GG G+EA V + M + +G D + YR+ +LA G + Sbjct: 4 QGHGFFWIGG-----PGEEAFNVPLGMLMKKGQGPAFDYLHAHYRQSATLLALGEEPIGA 58 Query: 126 MAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 + ++ S G+ + H + Q ++ G A A K D I + Sbjct: 59 LRQMKNTATDPYSGGRNFAGHFSKKAWNIAPVSSPIEVQYAIAPGTAMAQKRHGGDGITI 118 Query: 185 VCFGDGAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 V GD +G F +W+ L ++ ++ NN + + T+ +T+ + R Sbjct: 119 VTGGDAGTAEG----DFASCLIWSSRPANPLPILIIVTNNHWGISTAAEGQHGETHIADR 174 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 G +FNI ++G D + +A+ Y R + P ++E R GHS + AN+ T Sbjct: 175 GRAFNIRSKTINGNDPAESYRELKEAMEYVRQERKPFLLEARVSRLYGHSSASGANFVTN 234 Query: 299 E 299 E Sbjct: 235 E 235 >gi|7480529|pir||T36512 probable branched-chain alpha keto acid dehydrogenase E1 alpha chain - Streptomyces coelicolor Length = 179 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 2/142 (1%) Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 M + + +A + + + V + +PG VDG D AV + AV + RA GP ++E +T Sbjct: 1 MSVPLDKQTAAPSLAHKAVGYGMPGRLVDGNDAAAVHEVLSDAVRHARAGGGPTLVEAVT 60 Query: 282 YRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YR H+ +D A YR E+ R HDP+E + + L E ++ + + Sbjct: 61 YRVDAHTNADDATRYRGDAEVETWR-RHDPVELLERELTERGLLDEDGIRAAREDAETMA 119 Query: 341 NNSVEFAQSDKEPDPAELYSDI 362 + D E DP EL++ + Sbjct: 120 ADLRARMNQDPELDPLELFAHV 141 >gi|224535145|ref|ZP_03675684.1| hypothetical protein BACCELL_00005 [Bacteroides cellulosilyticus DSM 14838] gi|224523242|gb|EEF92347.1| hypothetical protein BACCELL_00005 [Bacteroides cellulosilyticus DSM 14838] Length = 280 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 110/266 (41%), Gaps = 9/266 (3%) Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGH 114 Y LM L R +EKA + F G + + + + T+G D + YR+ Sbjct: 18 YYLMTLGRALDEKAPAYLLQSLGWSFHAPYAGHDGIQLAIGQVFTKGEDFLFPYYRDMLT 77 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGG---SMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 L+ G+ A +++ L G G GG S H + G G+A Sbjct: 78 ALSAGMTAEELI--LNGISKATDPGSGGRHMSNHFAKPEWHIENISSATGTHDLHAAGVA 135 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 A Y + + G+ A+++G VYE+ N A+L L VI+V ++N Y + +A Sbjct: 136 RAMVYYDHKGVVITSHGESASSEGFVYEAVNGASLERLPVIFVWQDNGYGISVPKKDQTA 195 Query: 232 QTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + F N+ + +G D+ M +A Y ++ P+I+ R HS S Sbjct: 196 ARKVADNFSGFKNLKIIHCNGKDVFDSMNAMTEAREYALLNRNPVIVHANCVRIGSHSNS 255 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVR 315 D YR E+ ++ DP+ + R Sbjct: 256 DKDTLYRDENELAYVKEA-DPLLKFR 280 >gi|326494940|dbj|BAJ85565.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1016 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 4/183 (2%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + V+ GDG+ + QG VYE+ +++AL N I+++ NNQ A T Sbjct: 378 YSNDLDRTKNLGVLLHGDGSFSGQGVVYETLHLSALPNYTTGGTIHLVVNNQVAFTTDPM 437 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + P V+G D+ AV T + A + + ++++++ YR GH Sbjct: 438 SGRSSQYCTDVAKALDAPIFHVNGDDLEAVVYTCELAAEWRQTFHSDVVVDIVCYRRFGH 497 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D ++ + +R++ +E + +LL + S+ D+ +I V I+N + + Sbjct: 498 NEIDEPSFTQPKMYKVIRNHPSALEMYQNQLLESGKISKEDIDKIHKKVSTILNEEFKKS 557 Query: 348 QSD 350 + D Sbjct: 558 KDD 560 >gi|559800|gb|AAC13778.1| branched-chain keto acid dehydrogenase E1 alpha subunit [Myxococcus xanthus] Length = 295 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 21/241 (8%) Query: 71 QLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-----DQMITAYREHGHILACGVDASKI 125 Q +G +GG G+EA V + + + +G D + YR+ G +LA G + Sbjct: 4 QGHGYFWIGG-----PGEEAFNVSLGLLMKKGQGPDFDYLHAHYRQSGTLLALGEEPIGS 58 Query: 126 MAELTGR-QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 + ++ S G+ + H + K + Q ++ G A K D I + Sbjct: 59 LRQMKNTATDPYSGGRNFAGHYSARKYNVAPVSSPIEVQYAIAPGTAMVQKRHGGDGITI 118 Query: 185 VCFGDGAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 V GD +G F +W+ L ++ ++ NN++ + T+ + S R Sbjct: 119 VTGGDAGTAEGD----FASCLVWSSRPANPLPILIIVTNNKWGISTAAEGQHGEQRISDR 174 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 G +F I ++G D + +A+AY R + P ++E R GHS + ANY + Sbjct: 175 GKAFGIRSKTINGNDAVEAYTELREAMAYVRTERKPFLLEANVSRLYGHSSASGANYVSN 234 Query: 299 E 299 E Sbjct: 235 E 235 >gi|326531426|dbj|BAJ94174.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1018 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 94/183 (51%), Gaps = 8/183 (4%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + ++ GDG+ A QG VYE+ +++AL N I+++ NNQ A T Sbjct: 381 YSNDDDRTKNMGILIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPR 440 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + N+P V+G D+ AV + A + + ++++++ YR GH Sbjct: 441 AGRSSQYCTDVAKAVNVPIFHVNGDDLEAVVRVCELAAEWRQTFHSDVVVDLICYRRFGH 500 Query: 288 SMSDPANYRTREEINEMRSNH-DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + D ++ T+ ++ ++ NH ++ ++LL ++ D+ I V +I+N EF Sbjct: 501 NEIDEPSF-TQPKMYQVIKNHPSSLKLYEQKLLETGEVAKEDVDRIHDKVNRILNE--EF 557 Query: 347 AQS 349 A+S Sbjct: 558 AKS 560 >gi|256420583|ref|YP_003121236.1| transketolase central region [Chitinophaga pinensis DSM 2588] gi|256035491|gb|ACU59035.1| Transketolase central region [Chitinophaga pinensis DSM 2588] Length = 681 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 17/208 (8%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTG-RQGGISKGKGGSMH 145 G EA+ + M L D YR+ +LA G ++M +L R S G+ H Sbjct: 33 GHEAIQIATGMQLQPWDYASPYYRDDSMLLAMGFTPYELMLQLLAKRDDPASAGRSYYSH 92 Query: 146 MFST---KNGFYGGHGIVGAQVSLGTGIAFANKY------------RRSDKICVVC-FGD 189 S K G QV TG+A +Y + + V+C GD Sbjct: 93 PSSLDPDKPVIPHQSSATGMQVIPATGMAQGIRYLEKTGSPLLKTGPKGELPVVLCSLGD 152 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 G+ +G+V E++ A LW L VIY++++N++ + S + + M+V Sbjct: 153 GSVTEGEVSEAWQSAVLWELPVIYLVQDNEWGISASSEETRVMDAYEYAAGFKGMERMRV 212 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIII 277 DG + + A++Y R + P+++ Sbjct: 213 DGSNFEECYHAIGAAISYVRQERKPMLV 240 >gi|146278760|ref|YP_001168919.1| transketolase, central region [Rhodobacter sphaeroides ATCC 17025] gi|145557001|gb|ABP71614.1| branched-chain alpha-keto acid dehydrogenase E1 component [Rhodobacter sphaeroides ATCC 17025] Length = 727 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 19/168 (11%) Query: 160 VGAQVSLGTGIAFANKYRR--SDKICVVCFGDGAANQGQVYESFNIAALWN------LNV 211 VGA SLG ++R D + + FGD +AN +FN A W L + Sbjct: 153 VGAAYSLGLARRRPPEHRSLPEDALVMASFGDASANHSTAQGAFNTAG-WTAFQSVPLPL 211 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYC 268 ++V E+N + T R + +F R PG++ +G+DI A +A Y Sbjct: 212 LFVCEDNGIGISTKTPRGWIEASFRAR------PGLRYFRANGLDISETYAVAAEAADYV 265 Query: 269 RAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVR 315 R+ + P + + R GH+ +D P Y +REE+ +N + VR Sbjct: 266 RSRRKPAFLHLRNVRLYGHAGADLPTTYLSREEVEAEEANDPLLHSVR 313 >gi|297816834|ref|XP_002876300.1| hypothetical protein ARALYDRAFT_485968 [Arabidopsis lyrata subsp. lyrata] gi|297322138|gb|EFH52559.1| hypothetical protein ARALYDRAFT_485968 [Arabidopsis lyrata subsp. lyrata] Length = 1017 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 8/183 (4%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + ++ GDG+ A QG VYE+ +++AL N I+++ NNQ A T Sbjct: 382 YSNDLDRTKNLGILIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPK 441 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + P V+G D+ AV + A + + ++++++ YR GH Sbjct: 442 AGRSSQYCTDVAKALSAPIFHVNGDDVEAVVHACELAAEWRQTFHSDVVVDLVCYRRFGH 501 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + D ++ T+ ++ ++ NH Q+ K+LL S+ D+ I+ V I+N EF Sbjct: 502 NEIDEPSF-TQPKMYKVIKNHPSTLQIYHKKLLECGEVSQQDIDRIQEKVNTILNE--EF 558 Query: 347 AQS 349 S Sbjct: 559 VSS 561 >gi|307297867|ref|ZP_07577672.1| dehydrogenase E1 component [Sphingobium chlorophenolicum L-1] gi|306877337|gb|EFN08574.1| dehydrogenase E1 component [Sphingobium chlorophenolicum L-1] Length = 40 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 28/39 (71%), Positives = 32/39 (82%) Query: 274 PIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIE 312 PI++EM TYRYRGHSMSDPA YR+REE+ MR DPIE Sbjct: 1 PILLEMKTYRYRGHSMSDPAKYRSREEVQSMRDKSDPIE 39 >gi|116309350|emb|CAH66433.1| OSIGBa0096P03.7 [Oryza sativa Indica Group] Length = 1016 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 95/188 (50%), Gaps = 7/188 (3%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + V+ GDG+ + QG VYE+ +++AL N I+++ NNQ A T Sbjct: 378 YSNDLDRTKNLGVLLHGDGSFSGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPR 437 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + P V+G D+ AV + A + + ++++++ YR GH Sbjct: 438 AGRSSQYCTDVAKALDAPIFHVNGDDLEAVVHVCELAAEWRQTFHSDVVVDIVCYRRFGH 497 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D ++ + +R++ +E + RLL + S+ D+ +++ V I+N+ EF Sbjct: 498 NEIDEPSFTQPKMYKIIRNHQSALEIYQNRLLESGKISKEDIDKMQKKVSTILND--EF- 554 Query: 348 QSDKEPDP 355 Q+ KE P Sbjct: 555 QNSKEYIP 562 >gi|218194753|gb|EEC77180.1| hypothetical protein OsI_15669 [Oryza sativa Indica Group] Length = 1016 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 95/188 (50%), Gaps = 7/188 (3%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + V+ GDG+ + QG VYE+ +++AL N I+++ NNQ A T Sbjct: 378 YSNDLDRTKNLGVLLHGDGSFSGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPR 437 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + P V+G D+ AV + A + + ++++++ YR GH Sbjct: 438 AGRSSQYCTDVAKALDAPIFHVNGDDLEAVVHVCELAAEWRQTFHSDVVVDIVCYRRFGH 497 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D ++ + +R++ +E + RLL + S+ D+ +++ V I+N+ EF Sbjct: 498 NEIDEPSFTQPKMYKIIRNHQSALEIYQNRLLESGKISKEDIDKMQKKVSTILND--EF- 554 Query: 348 QSDKEPDP 355 Q+ KE P Sbjct: 555 QNSKEYIP 562 >gi|297602611|ref|NP_001052638.2| Os04g0390000 [Oryza sativa Japonica Group] gi|255675403|dbj|BAF14552.2| Os04g0390000 [Oryza sativa Japonica Group] Length = 1001 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 95/188 (50%), Gaps = 7/188 (3%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + V+ GDG+ + QG VYE+ +++AL N I+++ NNQ A T Sbjct: 363 YSNDLDRTKNLGVLLHGDGSFSGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPR 422 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + P V+G D+ AV + A + + ++++++ YR GH Sbjct: 423 AGRSSQYCTDVAKALDAPIFHVNGDDLEAVVHVCELAAEWRQTFHSDVVVDIVCYRRFGH 482 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D ++ + +R++ +E + RLL + S+ D+ +++ V I+N+ EF Sbjct: 483 NEIDEPSFTQPKMYKIIRNHQSALEIYQNRLLESGKISKEDIDKMQKKVSTILND--EF- 539 Query: 348 QSDKEPDP 355 Q+ KE P Sbjct: 540 QNSKEYIP 547 >gi|7076784|emb|CAB75899.1| 2-oxoglutarate dehydrogenase, E1 subunit-like protein [Arabidopsis thaliana] Length = 1009 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 8/183 (4%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + ++ GDG+ A QG VYE+ +++AL N I+++ NNQ A T Sbjct: 382 YSNDLDRTKNLGILIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPR 441 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + P V+G D+ AV + A + + ++++++ YR GH Sbjct: 442 AGRSSQYCTDVAKALSAPIFHVNGDDVEAVVHACELAAEWRQTFHSDVVVDLVCYRRFGH 501 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + D ++ T+ ++ ++ NH Q+ K+LL S+ D+ I+ V I+N EF Sbjct: 502 NEIDEPSF-TQPKMYKVIKNHPSTLQIYHKKLLECGEVSQQDIDRIQEKVNTILNE--EF 558 Query: 347 AQS 349 S Sbjct: 559 VAS 561 >gi|30694242|ref|NP_191101.2| 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative [Arabidopsis thaliana] gi|332645860|gb|AEE79381.1| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] Length = 1017 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 8/183 (4%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + ++ GDG+ A QG VYE+ +++AL N I+++ NNQ A T Sbjct: 382 YSNDLDRTKNLGILIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPR 441 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + P V+G D+ AV + A + + ++++++ YR GH Sbjct: 442 AGRSSQYCTDVAKALSAPIFHVNGDDVEAVVHACELAAEWRQTFHSDVVVDLVCYRRFGH 501 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + D ++ T+ ++ ++ NH Q+ K+LL S+ D+ I+ V I+N EF Sbjct: 502 NEIDEPSF-TQPKMYKVIKNHPSTLQIYHKKLLECGEVSQQDIDRIQEKVNTILNE--EF 558 Query: 347 AQS 349 S Sbjct: 559 VAS 561 >gi|115474297|ref|NP_001060747.1| Os07g0695800 [Oryza sativa Japonica Group] gi|34394039|dbj|BAC84070.1| putative 2-oxoglutarate dehydrogenase, E1 subunit [Oryza sativa Japonica Group] gi|113612283|dbj|BAF22661.1| Os07g0695800 [Oryza sativa Japonica Group] gi|215713493|dbj|BAG94630.1| unnamed protein product [Oryza sativa Japonica Group] Length = 1008 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 95/183 (51%), Gaps = 8/183 (4%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + ++ GDG+ A QG VYE+ +++AL + I+++ NNQ A T Sbjct: 371 YSNDLDRTKNMGILIHGDGSFAGQGVVYETLHLSALPSYTTGGTIHIVVNNQVAFTTDPR 430 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + N P V+G D+ AV + A + + ++++++ YR GH Sbjct: 431 AGRSSQYCTDVAKALNAPIFHVNGDDLEAVVRVCELAAEWRQTFHSDVVVDLICYRRFGH 490 Query: 288 SMSDPANYRTREEINEMRSNH-DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + D ++ T+ ++ ++ NH ++ ++LL S+ D+++I V +I+N EF Sbjct: 491 NEIDEPSF-TQPKMYQVIKNHPSSLKLYEQKLLGTGEVSKEDVQKIHEKVNRILNE--EF 547 Query: 347 AQS 349 A+S Sbjct: 548 AKS 550 >gi|227819380|ref|YP_002823351.1| transketolase [Sinorhizobium fredii NGR234] gi|227338379|gb|ACP22598.1| transketolase, central region [Sinorhizobium fredii NGR234] Length = 692 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 13/223 (5%) Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKG-GSMHMFSTKNGFYGGH--GIVGAQVS 165 YR +L+ GVD + + R GG S G+ G + + NG G VG+Q + Sbjct: 78 YRSRPLLLSLGVDPADALGSAMARAGGYSDGRDIGVVFNYPNPNGASALPMCGGVGSQYT 137 Query: 166 LGTGIA-----FANKYRRSD---KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G A F+ + + + I VV GDG+ + + +A L +++ IE+ Sbjct: 138 PTAGWAQAITYFSEQLKNENYDRDIAVVLGGDGSVASNGFWSALTVATTQGLPMLFYIED 197 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + + + N + ++ N+ + DG D AV R + P++ Sbjct: 198 NGFGISVPSTLQTPDGNIAANLAAWKNLAILDGDGSDPEEAARLTKGAVDLVRDERMPVL 257 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 + + R GHS D Y++ EE+ DP+ +++ L+ Sbjct: 258 LRLKVPRLEGHSFQDTQTYKS-EELVRSEWARDPLPRLKDYLV 299 >gi|293331403|ref|NP_001169536.1| hypothetical protein LOC100383412 [Zea mays] gi|224029953|gb|ACN34052.1| unknown [Zea mays] Length = 814 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 93/183 (50%), Gaps = 8/183 (4%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + ++ GDG+ A QG VYE+ +++AL N I+++ NNQ A T Sbjct: 177 YSNDADRTKNMGILIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPR 236 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + N P V+G D+ AV + A + + ++++++ YR GH Sbjct: 237 AGRSSQYCTDVAKALNAPIFHVNGDDLEAVVCVCELAAEWRQTFHSDVVVDLICYRRFGH 296 Query: 288 SMSDPANYRTREEINEMRSNH-DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + D ++ T+ ++ ++ NH ++ ++LL + D++ I V +I+N EF Sbjct: 297 NEIDEPSF-TQPKMYQVIKNHPSSLKLYEQKLLGTGEVMKEDVQRIHDKVNRILNE--EF 353 Query: 347 AQS 349 A+S Sbjct: 354 AKS 356 >gi|302793194|ref|XP_002978362.1| hypothetical protein SELMODRAFT_152569 [Selaginella moellendorffii] gi|300153711|gb|EFJ20348.1| hypothetical protein SELMODRAFT_152569 [Selaginella moellendorffii] Length = 969 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 6/179 (3%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 +++ Y R + ++ GDG+ + QG VYE+ +++ L N I+++ NNQ A T Sbjct: 335 YSDDYERKKNMAILLHGDGSFSGQGVVYETLHLSDLPNYTTGGTIHIVVNNQVAFTTDPR 394 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + N P V+G D+ AV + A + K ++++++ YR GH Sbjct: 395 SSRSSPYCTDVAKALNAPIFHVNGDDVEAVVHACELAAEWRCQFKADVVVDIVCYRRFGH 454 Query: 288 SMSDPANYRTREEINEMRSNHD-PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + D ++ T+ ++ ++ NH +E K+L+ + SE +K+I V I++ E Sbjct: 455 NEIDEPSF-TQPKMYQVIKNHPTSLELYEKKLIESGQISEETVKKIHDKVYGILSEEFE 512 >gi|255575120|ref|XP_002528465.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] gi|223532141|gb|EEF33948.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] Length = 1021 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 7/187 (3%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R + ++ GDG+ A QG VYE+ +++AL N + I+++ NNQ A T + Sbjct: 383 YSNDEDRIKNMGILIHGDGSFAGQGVVYETLHLSALPNYSTGGTIHIVVNNQVAFTTDPT 442 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + N P V+G D+ AV + A + + ++++++ YR GH Sbjct: 443 AGRSSQYCTDVAKALNAPIFHVNGDDVEAVVHACELAAEWRQTFHSDVVVDLVCYRRFGH 502 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRK-RLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + D ++ T+ ++ ++ NH Q+ K +LL + E D+ I+ V I+N Sbjct: 503 NEIDEPSF-TQPKMYQVIRNHPSSLQIYKNKLLESGQVGEEDISRIQEKVITILNEEF-L 560 Query: 347 AQSDKEP 353 A D P Sbjct: 561 ASKDYVP 567 >gi|226226462|ref|YP_002760568.1| 2-oxo acid dehydrogenase E1 component alpha/beta subunit [Gemmatimonas aurantiaca T-27] gi|226089653|dbj|BAH38098.1| 2-oxo acid dehydrogenase E1 component alpha/beta subunit [Gemmatimonas aurantiaca T-27] Length = 711 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 118/266 (44%), Gaps = 21/266 (7%) Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKG-GSMHMFSTKN--GFYGGHGIVGAQVS 165 YR +L+ G+ + GR GG S G+ G + + + G VG+Q + Sbjct: 91 YRSRPMLLSLGLPIDDALGSPLGRSGGFSDGRDIGVVCNLARPDRCTVLPMAGDVGSQYT 150 Query: 166 LGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G A + Y R + + V GD + + + +A L +++ IE+ Sbjct: 151 PAAGWAQSVIYHRDTLKDASYARSMSVALGGDASVATSGFWAALTMATTLKLPMLFYIED 210 Query: 218 NQYAMGTSVSRASAQT---NFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 N +G SV R QT + +K SF N+ G+D +++AV + R KG Sbjct: 211 NN--LGISV-RGDMQTPGADIAKNLASFGNLFIRNGSGIDPHEAAGLLEEAVTHIRDGKG 267 Query: 274 PIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 P ++ + R HS D YR+ +EI + + DP+ ++R+ L+ SE + + + Sbjct: 268 PALVRLTVPRLSSHSGPDNQKGYRSEQEIADDLTR-DPLPRLREYLV-PALLSESEWEAL 325 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAEL 358 E V + + ++ A++ PDP+ + Sbjct: 326 EAEVARDVQAGLDAARARPMPDPSTV 351 >gi|254994178|ref|ZP_05276368.1| pyruvate dehydrogenase E1 component subunit alpha [Listeria monocytogenes FSL J2-064] Length = 155 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 3/91 (3%) Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 SA +++ V+ IPG+QVDGMD AV A A A +GP +IE +TYRY H++ Sbjct: 1 SAAETLAQKAVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIETMTYRYGPHTL 60 Query: 290 S--DPANYRTREEINEMRSNHDPIEQVRKRL 318 S DP YRT+E E DPI + R L Sbjct: 61 SGDDPTRYRTKELDGEWELK-DPIVRFRTFL 90 >gi|87199067|ref|YP_496324.1| branched-chain alpha-keto acid dehydrogenase E1 component [Novosphingobium aromaticivorans DSM 12444] gi|87134748|gb|ABD25490.1| branched-chain alpha-keto acid dehydrogenase E1 component [Novosphingobium aromaticivorans DSM 12444] Length = 738 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 15/214 (7%) Query: 160 VGAQVSLGTG--IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW------NLNV 211 VGA S+G + F + D + + FGD +AN + N A W + + Sbjct: 159 VGAAFSIGIARRMGFDDTVLSKDGVVLCSFGDASANHSTALGAINTAC-WAAFQGTPMPI 217 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 I++ E+N + T + NFS R IP DG D+ A +A+ R Sbjct: 218 IFLCEDNGIGISTRTPPGWIEANFSGRAGLNYIP---CDGSDLVDTCAAARQALEIARRQ 274 Query: 272 KGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 + P+ + M T R GH+ +D YR++EEI DP+ L+ S ++ Sbjct: 275 RKPVFLHMKTVRLYGHAGNDVQLAYRSKEEIRA-EEERDPLLASAALLIEEGVMSAAQVR 333 Query: 331 EIEMNVRKIINNSVEFA-QSDKEPDPAELYSDIL 363 + + + VE A + K PD A + + I+ Sbjct: 334 GVYDEIEATLERQVELAIKRPKLPDAAAVMASIV 367 >gi|296169484|ref|ZP_06851104.1| dehydrogenase E1 component [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895750|gb|EFG75445.1| dehydrogenase E1 component [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 304 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/302 (24%), Positives = 128/302 (42%), Gaps = 42/302 (13%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E+ N ++L YR M ++R + + G++ G GQEA+ VG +L G Sbjct: 6 ELPAANVGEQLELYRRMWVLRLLDMALEESRIDGLLDGPMVAAFGQEALAVGAVAALRPG 65 Query: 103 DQMITAYR--EH----GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK-NGFYG 155 D M TA R EH G +L G ++++A + ++ + F+T+ + Sbjct: 66 DVMSTAIRHFEHARQVGRVLPLGPAIAEMIAP---SRAAVADAQESP---FATEWKQIFA 119 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + + G A+A + + + + G A + + + +IA W L V++V+ Sbjct: 120 TSDPLRKSILFALGDAYAQRLAGAGGVTLCVVGTDAVDSAEFKSAASIALSWRLPVVFVV 179 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 EN + G+ V R + + +P + DG D+ AV ++ +AV +GP Sbjct: 180 ENIRD--GSGVRRGPRERH--------GLPVLSADGKDVEAVHDSVTRAVRRASVGEGPT 229 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 ++E +TYR + PA DP+ R+RL S G L E+E Sbjct: 230 MVEAVTYR-----TNHPAGV-------------DPLVFARRRLTRAG-VSAGHLYEVERR 270 Query: 336 VR 337 R Sbjct: 271 AR 272 >gi|149543950|ref|XP_001517857.1| PREDICTED: similar to branched chain ketoacid dehydrogenase E1, alpha polypeptide, partial [Ornithorhynchus anatinus] Length = 495 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 1/126 (0%) Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YR 296 RG + I ++VDG D+ AV +A A P +IE +TYR HS SD ++ YR Sbjct: 337 RGPGYGIMSIRVDGNDVFAVYNATREARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYR 396 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 + +E+N PI ++R LL W E + K RK++ + E A+ +P+ Sbjct: 397 SVDEVNYWDKQDHPISRLRHHLLSKGWWGEEEEKTWRKQSRKLVMEAFEAAERKLKPNLN 456 Query: 357 ELYSDI 362 L+SD+ Sbjct: 457 LLFSDV 462 >gi|260797441|ref|XP_002593711.1| hypothetical protein BRAFLDRAFT_64002 [Branchiostoma floridae] gi|229278939|gb|EEN49722.1| hypothetical protein BRAFLDRAFT_64002 [Branchiostoma floridae] Length = 315 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 8/200 (4%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG--GFCHLCIGQEAVIVGMK 96 L+ E + +K+ L YR M+++ + G LY G F G+E +G Sbjct: 25 LKSSEDPQLSKDTVLEMYRKMVMLSTMD---GILYNAQRQGRISFYMTNYGEEGTHIGSA 81 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 +L D YRE G L G M + +KG+ ++ S ++ F Sbjct: 82 AALDPQDMAFGQYREAGVFLWRGYTLDDFMNQCFSNDLDYNKGRAFPVNFGSKEHNFATY 141 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYV- 214 + Q+ G A+A K R +CVVC FGDGAA++G + +FN AA + VI+ Sbjct: 142 SSPLATQMPHAAGAAYALK-RAGTGLCVVCYFGDGAASEGDAHAAFNFAATLDCPVIFFW 200 Query: 215 IENNQYAMGTSVSRASAQTN 234 I ++ + +S R + N Sbjct: 201 IGDHSTSDDSSAYRTHDEVN 220 >gi|242072742|ref|XP_002446307.1| hypothetical protein SORBIDRAFT_06g013940 [Sorghum bicolor] gi|241937490|gb|EES10635.1| hypothetical protein SORBIDRAFT_06g013940 [Sorghum bicolor] Length = 1025 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 90/182 (49%), Gaps = 6/182 (3%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + V+ GDG+ + QG VYE+ +++AL N I+++ NNQ A T Sbjct: 387 YSNDRDRTKNLGVLLHGDGSFSGQGVVYETLHLSALENYTTGGTIHIVVNNQVAFTTDPE 446 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + P V+G D+ AV + A + + ++++++ YR GH Sbjct: 447 SGRSSQYCTDVAKALDAPIFHVNGDDLEAVVHVCELAAEWRQTFHSDVVVDIVCYRRFGH 506 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D ++ + +R++ +E +++LL + S+ D+ ++ V I+N EF Sbjct: 507 NEIDEPSFTQPKMYKVIRNHPSALEIYQRKLLESGKISKEDIDKLNKKVSTILNE--EFQ 564 Query: 348 QS 349 S Sbjct: 565 NS 566 >gi|28416717|gb|AAO42889.1| At3g55410 [Arabidopsis thaliana] gi|110743207|dbj|BAE99494.1| 2-oxoglutarate dehydrogenase, E1 subunit - like protein [Arabidopsis thaliana] Length = 1017 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 8/183 (4%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + ++ GDG+ A QG VYE+ +++AL N I+++ NNQ T Sbjct: 382 YSNDLDRTKNLGILIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVVFTTDPR 441 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + P V+G D+ AV + A + + ++++++ YR GH Sbjct: 442 AGRSSQYCTDVAKALSAPIFHVNGDDVEAVVHACELAAEWRQTFHSDVVVDLVCYRRFGH 501 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 + D ++ T+ ++ ++ NH Q+ K+LL S+ D+ I+ V I+N EF Sbjct: 502 NEIDEPSF-TQPKMYKVIKNHPSTLQIYHKKLLECGEVSQQDIDRIQEKVNTILNE--EF 558 Query: 347 AQS 349 S Sbjct: 559 VAS 561 >gi|242072740|ref|XP_002446306.1| hypothetical protein SORBIDRAFT_06g013930 [Sorghum bicolor] gi|241937489|gb|EES10634.1| hypothetical protein SORBIDRAFT_06g013930 [Sorghum bicolor] Length = 1025 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 90/182 (49%), Gaps = 6/182 (3%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + V+ GDG+ + QG VYE+ +++AL N I+++ NNQ A T Sbjct: 387 YSNDRDRTKNLGVLLHGDGSFSGQGVVYETLHLSALENYTTGGTIHIVVNNQVAFTTDPK 446 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + P V+G D+ AV + A + + ++++++ YR GH Sbjct: 447 SGRSSQYCTDVAKALDAPIFHVNGDDLEAVVHVCELAAEWRQTFHSDVVVDIVCYRRFGH 506 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D ++ + +R++ +E +++LL + S+ D+ ++ V I+N EF Sbjct: 507 NEIDEPSFTQPKMYKVIRNHPSALEIYQRKLLESGKISKEDIDKLNKKVSTILNE--EFQ 564 Query: 348 QS 349 S Sbjct: 565 NS 566 >gi|293335820|ref|NP_001169698.1| hypothetical protein LOC100383579 [Zea mays] gi|224031001|gb|ACN34576.1| unknown [Zea mays] Length = 1025 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 90/182 (49%), Gaps = 6/182 (3%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++N R+ + V+ GDG+ + QG VYE+ +++AL N I+++ NNQ A T Sbjct: 387 YSNDRDRTKNLGVLLHGDGSFSGQGVVYETLHLSALENYTTGGTIHIVVNNQVAFTTDPR 446 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + P V+G D+ AV + A + + ++++++ YR GH Sbjct: 447 SGRSSQYCTDVAKALDAPIFHVNGDDLEAVVHVCELAAEWRQTFHSDVVVDIVCYRRFGH 506 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D ++ + +R++ +E +++LL + S+ D+ ++ V I+N EF Sbjct: 507 NEIDEPSFTQPKMYKVIRNHPSALEIYQRKLLESGKISKEDIDKLNKKVSTILNE--EFQ 564 Query: 348 QS 349 S Sbjct: 565 NS 566 >gi|302838682|ref|XP_002950899.1| E1 subunit of 2-oxoglutarate dehydrogenase [Volvox carteri f. nagariensis] gi|300264016|gb|EFJ48214.1| E1 subunit of 2-oxoglutarate dehydrogenase [Volvox carteri f. nagariensis] Length = 1040 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 89/184 (48%), Gaps = 4/184 (2%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 +++ + R + ++ GDGA + QG VYE+ +++ L + V I+++ NNQ A T Sbjct: 390 YSDDHERLRNMAILLHGDGAFSGQGIVYETLDMSGLPDYTVGGTIHLVVNNQVAFTTDPK 449 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + S N P V+ D+ +V A + +A K ++++++ YR GH Sbjct: 450 DSRSSPYCTDVAKSLNCPIFHVNADDVESVVRVCQLAAEWRQAWKSDVVVDLVCYRKHGH 509 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D + ++++ E +RLL ++ +++ I ++ ++N S E A Sbjct: 510 NEIDEPMFTQPLMYKKIKAKKHSHEMYAERLLEEGTFTKEEIRAIHDKIQSLLNESFEAA 569 Query: 348 QSDK 351 + K Sbjct: 570 KDYK 573 >gi|225574078|ref|ZP_03782689.1| hypothetical protein RUMHYD_02140 [Blautia hydrogenotrophica DSM 10507] gi|225038704|gb|EEG48950.1| hypothetical protein RUMHYD_02140 [Blautia hydrogenotrophica DSM 10507] Length = 279 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +++ +G+A A KYR+ D GDG +G +E N AA L N+I ++ Sbjct: 122 GSLGNGIAIASGMAIAGKYRKKDYTVYAIVGDGELQEGVCWEGINAAAGHKLDNLIVFLD 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + G +V N +R +F ++DG DI A+KA ++KA Sbjct: 182 KNGWQSGGTVEETIGSNNLKERFEAFQWDTQEIDGHDIDAIKAAIEKA 229 >gi|302773560|ref|XP_002970197.1| hypothetical protein SELMODRAFT_93779 [Selaginella moellendorffii] gi|300161713|gb|EFJ28327.1| hypothetical protein SELMODRAFT_93779 [Selaginella moellendorffii] Length = 972 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 90/179 (50%), Gaps = 6/179 (3%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 +++ + R + ++ GDG+ + QG VYE+ +++ L N I+++ NNQ A T Sbjct: 335 YSDDFERKKNMAILLHGDGSFSGQGVVYETLHLSDLPNYTTGGTIHIVVNNQVAFTTDPR 394 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + N P V+G D+ AV + A + K ++++++ YR GH Sbjct: 395 SSRSSPYCTDVAKALNAPIFHVNGDDVEAVVHACELAAEWRCQFKADVVVDIVCYRRFGH 454 Query: 288 SMSDPANYRTREEINEMRSNHD-PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + D ++ T+ ++ ++ NH +E K+L+ + SE +K+I V I++ E Sbjct: 455 NEIDEPSF-TQPKMYQVIKNHPTSLELYEKKLIESGQISEETVKKIHDKVYGILSEEFE 512 >gi|260574064|ref|ZP_05842069.1| Transketolase central region [Rhodobacter sp. SW2] gi|259023530|gb|EEW26821.1| Transketolase central region [Rhodobacter sp. SW2] Length = 729 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 19/168 (11%) Query: 160 VGAQVSLGTGIAFANKYRR--SDKICVVCFGDGAANQGQVYESFNIAALWN------LNV 211 VGA ++G ++++ D I + FGD +AN +FN A W L + Sbjct: 154 VGAAYAIGAAKRRPPEHKQLPDDAIVMCSFGDASANHSTAQGAFNTAG-WTAYQSIPLPL 212 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYC 268 ++V E+N + T + + FS R PG+Q DG+DI A + Sbjct: 213 LFVCEDNGIGISTKTPKGWIEAGFSAR------PGLQYFACDGLDIFETYRVAQAAAQFT 266 Query: 269 RAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVR 315 R + P + + T R GH+ +D P Y +REE+ +N + VR Sbjct: 267 RQRRKPAFLHIRTIRLYGHAGADVPTTYLSREEVEAEEANDPLLHAVR 314 >gi|167041487|gb|ABZ06237.1| putative dehydrogenase E1 component [uncultured marine microorganism HF4000_007I05] Length = 279 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 18/240 (7%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQE---AVIVGMKMSLTEGDQMITAY 109 L + R FEE+ + + ++ GQE A I + + + + Sbjct: 8 LKVFEKASYCRHFEEQVIKNIKKKNINIPTYVSAGQEFISATIATICENKKIKPMIFGQH 67 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R H ++ G D K++ EL GR+ G ++ GGS + S +G G++G+ +G G Sbjct: 68 RCHSIYISFGGDKIKLIDELLGRKTGCTRSMGGSASIHSKDINMFGHDGLMGSNGPIGVG 127 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 FA+K K ++ GD AA + V+ S A+ N+ ++ +IE+N ++ T + Sbjct: 128 ACFASK-----KPTIIFLGDAAAEEDYVFGSLGWASTKNIPLLTIIEDNNLSILTE-KKV 181 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA-HKGPIIIEMLTYRYRGHS 288 + SF I +D + +K Y ++ K P ++ + T+R H+ Sbjct: 182 RRNWEVDEVARSFKIESYNLDDNPLNLLK--------YSKSFFKNPCLLNVNTHRIYWHA 233 >gi|307323009|ref|ZP_07602262.1| dehydrogenase E1 component [Sinorhizobium meliloti AK83] gi|306891346|gb|EFN22279.1| dehydrogenase E1 component [Sinorhizobium meliloti AK83] Length = 55 Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 28/42 (66%), Positives = 35/42 (83%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIG 87 +F K+++L AYR +LLIRRFEEKAGQLY M ++ GFCHL IG Sbjct: 4 KFGKDEDLHAYREVLLIRRFEEKAGQLYCMSLIRGFCHLYIG 45 >gi|221091885|ref|XP_002158470.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 138 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 65/130 (50%) Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 C G+EA+ G +L + D + + YRE G ++ G M + G + + G+ + Sbjct: 9 CYGEEAIHFGSASALNDVDLIFSQYREQGVLMWRGFPLESFMNQCYGNENDLGLGRQMPV 68 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 H S + F + Q+ G A+A K ++S+ V FG+GAA++G + +FN A Sbjct: 69 HYGSKVHNFVTISSTLATQMPNAVGAAYALKMQKSNSCAVCYFGEGAASEGDAHAAFNFA 128 Query: 205 ALWNLNVIYV 214 A + +I++ Sbjct: 129 ATLDCPIIFI 138 >gi|110740037|dbj|BAF01922.1| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] Length = 673 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 85/172 (49%), Gaps = 4/172 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GDG+ A QG VYE+ +++AL N ++++ NNQ A T + Sbjct: 40 RTKNMGILIHGDGSFAGQGVVYETLHLSALPNYCTGGTVHIVVNNQVAFTTDPREGRSSQ 99 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + + P V+ DI AV + A + + ++++++ YR GH+ D Sbjct: 100 YCTDVAKALSAPIFHVNADDIEAVVHACELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEP 159 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 ++ + +RS+ ++ +++LL + ++ D+ +I+ V I+N E Sbjct: 160 SFTQPKMYKVIRSHPSSLQIYQEKLLQSGQVTQEDIDKIQKKVSSILNEEYE 211 >gi|2827711|emb|CAA16684.1| oxoglutarate dehydrogenase - like protein [Arabidopsis thaliana] Length = 973 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 85/172 (49%), Gaps = 4/172 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GDG+ A QG VYE+ +++AL N ++++ NNQ A T + Sbjct: 392 RTKNMGILIHGDGSFAGQGVVYETLHLSALPNYCTGGTVHIVVNNQVAFTTDPREGRSSQ 451 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + + P V+ DI AV + A + + ++++++ YR GH+ D Sbjct: 452 YCTDVAKALSAPIFHVNADDIEAVVHACELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEP 511 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 ++ + +RS+ ++ +++LL + ++ D+ +I+ V I+N E Sbjct: 512 SFTQPKMYKVIRSHPSSLQIYQEKLLQSGQVTQEDIDKIQKKVSSILNEEYE 563 >gi|4210330|emb|CAA11552.1| 2-oxoglutarate dehydrogenase, E1 subunit [Arabidopsis thaliana] Length = 1027 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 85/172 (49%), Gaps = 4/172 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GDG+ A QG VYE+ +++AL N ++++ NNQ A T + Sbjct: 392 RTKNMGILIHGDGSFAGQGVVYETLHLSALPNYCTGGTVHIVVNNQVAFTTDPREGRSSQ 451 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + + P V+ DI AV + A + + ++++++ YR GH+ D Sbjct: 452 YCTDVAKALSAPIFHVNADDIEAVVHACELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEP 511 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 ++ + +RS+ ++ +++LL + ++ D+ +I+ V I+N E Sbjct: 512 SFTQPKMYKVIRSHPSSLQIYQEKLLQSGQVTQEDIDKIQKKVSSILNEEYE 563 >gi|15239128|ref|NP_201376.1| 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative [Arabidopsis thaliana] gi|10177333|dbj|BAB10682.1| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] gi|18389254|gb|AAL67070.1| putative 2-oxoglutarate dehydrogenase E1 component [Arabidopsis thaliana] gi|20465597|gb|AAM20281.1| putative 2-oxoglutarate dehydrogenase E1 component [Arabidopsis thaliana] gi|332010718|gb|AED98101.1| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] Length = 1025 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 85/172 (49%), Gaps = 4/172 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GDG+ A QG VYE+ +++AL N ++++ NNQ A T + Sbjct: 392 RTKNMGILIHGDGSFAGQGVVYETLHLSALPNYCTGGTVHIVVNNQVAFTTDPREGRSSQ 451 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + + P V+ DI AV + A + + ++++++ YR GH+ D Sbjct: 452 YCTDVAKALSAPIFHVNADDIEAVVHACELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEP 511 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 ++ + +RS+ ++ +++LL + ++ D+ +I+ V I+N E Sbjct: 512 SFTQPKMYKVIRSHPSSLQIYQEKLLQSGQVTQEDIDKIQKKVSSILNEEYE 563 >gi|219123641|ref|XP_002182131.1| 2-oxoglutarate dehydrogenase E1 component [Phaeodactylum tricornutum CCAP 1055/1] gi|217406732|gb|EEC46671.1| 2-oxoglutarate dehydrogenase E1 component [Phaeodactylum tricornutum CCAP 1055/1] Length = 1073 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 6/156 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ +A + + +V I+VI NNQ T+ + + S Sbjct: 441 VPILLHGDAAFAGQGVVYETMQMAEVPDFDVGGTIHVIINNQIGFTTNPIHSRSTPYSSD 500 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 G +FN P +G D AV ++ AV + +IIEM+ YR GH+ D + T Sbjct: 501 LGKAFNCPIFHCNGDDPLAVSTALETAVEWRHEWGMDVIIEMVCYRRNGHNELDQPAF-T 559 Query: 298 REEINEMRSNHDP-IEQVRKRLLHNKWASEGDLKEI 332 + ++ + S H P ++ KRL+ S+ + +EI Sbjct: 560 QPKLYKEISRHPPTLDIFEKRLIEEGTLSKEECQEI 595 >gi|149056580|gb|EDM08011.1| branched chain ketoacid dehydrogenase E1, alpha polypeptide, isoform CRA_b [Rattus norvegicus] Length = 152 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 1/118 (0%) Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEM 304 ++VDG D+ AV +A A P +IE +TYR HS SD ++ YR+ +E+N Sbjct: 2 SIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYW 61 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 PI ++R+ LL+ W E K RK + + E A+ +P+P+ L+SD+ Sbjct: 62 DKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVMEAFEQAERKLKPNPSLLFSDV 119 >gi|254820487|ref|ZP_05225488.1| dehydrogenase E1 component superfamily protein [Mycobacterium intracellulare ATCC 13950] Length = 276 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 64/247 (25%), Positives = 106/247 (42%), Gaps = 17/247 (6%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM-ITAYR-EHGHIL 116 M ++R + + G++ + GQEAV VG +L GD + TA R H + Sbjct: 1 MWVLRLLDMALEEARSDGLIDEAVRMEFGQEAVAVGTAAALRPGDIVNATAPRIRHAQHV 60 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 + ++AE G+ G S+ G + + N ++G G A A + Sbjct: 61 GLALPLGPVIAETIGKARGASRKPGAADWKQALAN-----ESVLGQSTLFALGDANAQRM 115 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 K+ + G A+ + + IA W L V++V+EN + G R + +T+ Sbjct: 116 TGEGKVTLCVVGGRDAHSVEFTTAAKIAVTWRLPVVFVVENIRG--GPDARRRAYETD-- 171 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 +P VDG D+ AV A++ +AV A GP ++E +TYR DP + Sbjct: 172 ------GMPMRSVDGRDVAAVSASVAEAVQRASAGGGPTLVEAITYRTNHPVAMDPLVFA 225 Query: 297 TREEINE 303 R+ I E Sbjct: 226 RRQLIAE 232 >gi|126738660|ref|ZP_01754365.1| dehydrogenase/transketolase family protein [Roseobacter sp. SK209-2-6] gi|126720459|gb|EBA17165.1| dehydrogenase/transketolase family protein [Roseobacter sp. SK209-2-6] Length = 729 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 23/170 (13%) Query: 160 VGAQVSLGTGIAFANKYRR------SDKICVVCFGDGAANQGQVYESFNIAALWN----- 208 VGA S+G A ++R D I + FGD +AN +FN A W Sbjct: 154 VGAAYSIGA----AKRHRPEHQAMADDAIVMCSFGDASANHSTAQGAFNTAG-WTSVQST 208 Query: 209 -LNVIYVIENNQYAMGTSVSRASAQTNFSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVA 266 L +++V E+N + T + + + S R G+ + + DG+DI A A +A Sbjct: 209 PLPLLFVCEDNGIGISTKTPKGWIEASMSARPGIKY----FKADGLDIYAAHAVAQEATE 264 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVR 315 Y R+ + P + + T R GH+ +D P Y ++ E+ N + VR Sbjct: 265 YVRSRRKPAFLHIGTVRLYGHAGADVPTTYLSKAEVEGDEGNDPLLHSVR 314 >gi|290997005|ref|XP_002681072.1| 2-oxoglutarate dehydrogenase [Naegleria gruberi] gi|284094695|gb|EFC48328.1| 2-oxoglutarate dehydrogenase [Naegleria gruberi] Length = 977 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 90/178 (50%), Gaps = 10/178 (5%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + V+ GD A A QG +YE+ ++ L I+V+ NNQ T+ R+S T Sbjct: 361 REKVLPVLLHGDAAFAGQGVIYETMGLSQLDEYGTGGTIHVVVNNQIGFTTN-PRSSRST 419 Query: 234 NFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 ++ F N P V+ D AV A Y + + G ++I+++ YR RGH+ D Sbjct: 420 SYCTDIAKFLNAPVFHVNADDPNAVVKVCKLAAEYRQQYHGDVVIDIVCYRKRGHNELDE 479 Query: 293 ANYRTREEINEMRSNHDP-IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 + T+ + + + +P I + RK+LL +E LK+++ V+ + + VEFA++ Sbjct: 480 PMF-TQPLMYQAIAKQEPVISKYRKQLLKEGIVNEEHLKQVDEQVKNVFD--VEFARA 534 >gi|297794187|ref|XP_002864978.1| E1 subunit of 2-oxoglutarate dehydrogenase [Arabidopsis lyrata subsp. lyrata] gi|297310813|gb|EFH41237.1| E1 subunit of 2-oxoglutarate dehydrogenase [Arabidopsis lyrata subsp. lyrata] Length = 1025 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 84/168 (50%), Gaps = 4/168 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQT 233 R+ + V+ GDG+ A QG VYE+ +++AL N ++++ NNQ A T + Sbjct: 392 RTKNMGVLIHGDGSFAGQGVVYETLHLSALPNYCTGGTVHIVVNNQVAFTTDPREGRSSQ 451 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + + P V+ DI AV + A + + ++++++ YR GH+ D Sbjct: 452 YCTDVAKALSAPIFHVNADDIEAVVHVCELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEP 511 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 ++ + +R++ ++ +++LL + +E D+ +I+ V I+N Sbjct: 512 SFTQPKMYKVIRNHPSSLQIYQEKLLQSGQVTEEDIDKIQKKVSSILN 559 >gi|237835223|ref|XP_002366909.1| 2-oxoglutarate dehydrogenase, putative [Toxoplasma gondii ME49] gi|211964573|gb|EEA99768.1| 2-oxoglutarate dehydrogenase, putative [Toxoplasma gondii ME49] Length = 1116 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%) Query: 166 LGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 L G A A +Y D+ + V+ GD + A QG VYE+ ++ L N V I+++ Sbjct: 455 LVIGQARAQQYYSEDEDSTKVLPVILHGDASVAGQGVVYETLQMSQLPNYRVGGTIHIVV 514 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ T+ +S+ + + + P V+ D AV + A+ Y + KG + Sbjct: 515 NNQIGFTTNPVDSSSGRYCTDIAKALDAPVFHVNADDPEAVTFVSELALEYRQRFKGDVF 574 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 I+++ YR GH+ D + N + + +RLL+ +E DL++++ N+ Sbjct: 575 IDLIGYRRLGHNELDMPKFTQPRMYNLISKKKSVFDIYSERLLNEGVVTEADLQQLKQNI 634 Query: 337 RKIINNSVE 345 N E Sbjct: 635 LAFYNAEYE 643 >gi|326781943|ref|YP_004322345.1| transketolase central region-containing protein [Synechococcus phage S-SM2] gi|310003133|gb|ADO97531.1| transketolase central region-containing protein [Synechococcus phage S-SM2] Length = 402 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 10/167 (5%) Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 +R F +K + + G + HL G E ++ + ++ EGD +++ +R H L G+ Sbjct: 11 LRSFVDKIAEHHDAGRLPFALHLPGGNEEQLIDIFSNINEGDYVLSTHRNMYHALLHGLP 70 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 ++ ++ G SM MF + FY I+G V++ GIA+A K + SD+ Sbjct: 71 PEEVEEKIL---------NGRSMFMFDRERNFYVS-AIIGGPVAIAVGIAWALKRKGSDQ 120 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 GDG + G E+ ++L ++IE++ A+ R Sbjct: 121 RVWCFLGDGTEDTGHFAEAVRYVNGFDLPCTFIIEDDCMAVEAPKER 167 >gi|221485793|gb|EEE24063.1| 2-oxoglutarate dehydrogenase, putative [Toxoplasma gondii GT1] Length = 1116 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%) Query: 166 LGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 L G A A +Y D+ + V+ GD + A QG VYE+ ++ L N V I+++ Sbjct: 455 LVIGQARAQQYYSEDEDSTKVLPVILHGDASVAGQGVVYETLQMSQLPNYRVGGTIHIVV 514 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ T+ +S+ + + + P V+ D AV + A+ Y + KG + Sbjct: 515 NNQIGFTTNPVDSSSGRYCTDIAKALDAPVFHVNADDPEAVTFVSELALEYRQRFKGDVF 574 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 I+++ YR GH+ D + N + + +RLL+ +E DL++++ N+ Sbjct: 575 IDLIGYRRLGHNELDMPKFTQPRMYNLISKKKSVFDIYSERLLNEGVVTEADLQQLKQNI 634 Query: 337 RKIINNSVE 345 N E Sbjct: 635 LAFYNAEYE 643 >gi|260431315|ref|ZP_05785286.1| dehydrogenase/transketolase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415143|gb|EEX08402.1| dehydrogenase/transketolase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 729 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 17/194 (8%) Query: 134 GGISKGKGGSMHMFSTKNGFYGGH--GIVGAQVSLGTGIAFANKYRR--SDKICVVCFGD 189 GG K G M + H VGA SLG ++R+ D I + FGD Sbjct: 126 GGRHKVLGSKALMIPPQTSTIASHLPKAVGAAYSLGAARRLDPEHRQLPEDGIAMCSFGD 185 Query: 190 GAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRASAQTNFSKR-GVSF 242 +AN + N A W L +++V E+N + + Q + R G+ + Sbjct: 186 ASANHSTAQGAINTAG-WTSVQSIPLPLLFVCEDNGIGISVKTPKGWIQASMEHRPGIRY 244 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEI 301 Q +G+DI A +A Y R + P + + T R GH+ +D P Y +R E+ Sbjct: 245 ----FQANGLDIFETFAVAQQAADYVRTRRKPAFLHLKTVRLYGHAGADVPTTYLSRAEV 300 Query: 302 NEMRSNHDPIEQVR 315 +N + VR Sbjct: 301 EADEANDPLLHSVR 314 >gi|86136893|ref|ZP_01055471.1| dehydrogenase/transketolase family protein [Roseobacter sp. MED193] gi|85826217|gb|EAQ46414.1| dehydrogenase/transketolase family protein [Roseobacter sp. MED193] Length = 731 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 81/194 (41%), Gaps = 17/194 (8%) Query: 134 GGISKGKGGSMHMFSTKNGFYGGH--GIVGAQVSLGTGIAFANKYR--RSDKICVVCFGD 189 GG K G M + H VGA S+G A ++R R D I + FGD Sbjct: 128 GGRHKVLGSKALMIPPQTSTIASHLPKAVGAAYSIGAAKRHAPEHRVLRDDSIVMCSFGD 187 Query: 190 GAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRASAQTNFSKR-GVSF 242 +AN + N A W L +++V E+N + T + + + R G+ + Sbjct: 188 ASANHSTAQGAINTAG-WTSVQSTPLPLLFVCEDNGIGISTKTPQGWIEASMRARPGIKY 246 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEI 301 Q DG+DI A A +A Y R K P + + T R GH+ +D P Y + E+ Sbjct: 247 ----FQADGLDIYAAHAVAQEAANYVRRRKKPAFLHLRTVRLYGHAGADVPTTYLPKSEV 302 Query: 302 NEMRSNHDPIEQVR 315 +N + VR Sbjct: 303 EADEANDPLLHTVR 316 >gi|118468547|ref|YP_886807.1| transketolase, central region [Mycobacterium smegmatis str. MC2 155] gi|118169834|gb|ABK70730.1| transketolase, central region [Mycobacterium smegmatis str. MC2 155] Length = 719 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 79/335 (23%), Positives = 129/335 (38%), Gaps = 58/335 (17%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 + +L++ L L R + Y +G G G AV ++++ D + Y Sbjct: 44 DAQLASRHLDLAARWLRAQGKGFYTIGSSGHE-----GNAAVAAALRLT----DPALLHY 94 Query: 110 REHGHILA-----CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI----- 159 R G A CG D I L G S+ G H +G H + Sbjct: 95 RSGGFYAARAAQACGTD--PIRDVLLGVLAATSEPISGGRHKV------FGRHDLNVIPQ 146 Query: 160 ---VGAQVSLGTGIAFANKYRR---------SDKICVVCFGDGAANQGQVYESFNIAAL- 206 + + + G+AFA R D + V FGD +AN + N AAL Sbjct: 147 TSTIASHLPRAVGVAFAIARARKLGVPCAWPDDAVTVCSFGDASANHSTAVGAIN-AALH 205 Query: 207 -----WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ---VDGMDIRAVK 258 + +++V E+N + T R + R PG+Q DG D+ + Sbjct: 206 AAYQGLPMPLLFVCEDNGIGISTRTPRGWIANAYGNR------PGLQYFAADGSDLSSAY 259 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKR 317 T A + R H+ P + + T R GH+ SD +YR EEI + DP+ K Sbjct: 260 DTAQAAADWVRRHRKPAFLHLSTVRLMGHAGSDYEPSYRRPEEI-VADFDRDPVLNTAKM 318 Query: 318 LL-HNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 L+ H + + L+ E ++I+ + E + + + Sbjct: 319 LVAHGILSPDQALQRYEDKRAEVIDCARELSAAPQ 353 >gi|1763350|gb|AAB39723.1| pyruvate dehydrogenase E1-alpha- subunit [Homo sapiens] gi|1763352|gb|AAB39724.1| pyruvate dehydrogenase E1-alpha- subunit [Homo sapiens] gi|1763354|gb|AAB39725.1| pyruvate dehydrogenase E1-alpha- subunit [Homo sapiens] gi|1763356|gb|AAB39726.1| pyruvate dehydrogenase E1-alpha- subunit [Homo sapiens] Length = 59 Score = 63.2 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 29/59 (49%), Positives = 43/59 (72%) Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 1 YRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 59 >gi|159039146|ref|YP_001538399.1| transketolase domain-containing protein [Salinispora arenicola CNS-205] gi|157917981|gb|ABV99408.1| Transketolase domain protein [Salinispora arenicola CNS-205] Length = 805 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 26/215 (12%) Query: 163 QVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWN-----LNVIYVIE 216 QV+L + R VVC FGD + N + N A ++ L V+++ E Sbjct: 220 QVTLDAAPWPPDVARWPPDAVVVCSFGDASVNHASATAALNTAGWYDHTGLRLPVLFLCE 279 Query: 217 NNQYAMGTSVSRAS---AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 +N +G SV A +K G+ + DG ++ A D+AV + R H+ Sbjct: 280 DN--GLGISVRSPKGWVAAVLRAKPGIRY----FTADGTNLVEAYAVADEAVRWVRRHRR 333 Query: 274 PIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEG-DL-- 329 P ++ + T R GH+ +D YRT EI + DP+ V RLL + G DL Sbjct: 334 PAVLHLSTVRLMGHAGADAETAYRTTTEI-AADLDRDPL-LVTARLLTGAGVAAGADLLA 391 Query: 330 --KEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 EI VR+I E K DPAE+ + + Sbjct: 392 RYDEIGWQVRRIAE---EVLDEPKLADPAEVVAPL 423 >gi|254510891|ref|ZP_05122958.1| Dehydrogenase E1 component family protein [Rhodobacteraceae bacterium KLH11] gi|221534602|gb|EEE37590.1| Dehydrogenase E1 component family protein [Rhodobacteraceae bacterium KLH11] Length = 730 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 17/194 (8%) Query: 134 GGISKGKGGSMHMFSTKNGFYGGH--GIVGAQVSLGTGIAFANKYR--RSDKICVVCFGD 189 GG K G M + H VGA +LG A ++R D I + FGD Sbjct: 126 GGRHKVLGSRALMIPPQTSTIASHLPKAVGAAYALGAARRNAPEHRVLPEDGIAICSFGD 185 Query: 190 GAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRASAQTNFSKR-GVSF 242 +AN + N A W L +++V E+N + + Q + R G+ + Sbjct: 186 ASANHSTAQGAINTAG-WTSVQSTPLPLLFVCEDNGIGISVKTPKGWIQASMEHRPGIRY 244 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEI 301 Q +G+DI A +AV Y R + P + + T R GH+ +D P Y + E+ Sbjct: 245 ----FQANGLDIYETYAVAKEAVDYVRKRRKPAFLHLRTVRLYGHAGADVPTTYLPKAEV 300 Query: 302 NEMRSNHDPIEQVR 315 +N + VR Sbjct: 301 EADEANDPLLHSVR 314 >gi|256822758|ref|YP_003146721.1| 2-oxoglutarate dehydrogenase, E1 subunit [Kangiella koreensis DSM 16069] gi|256796297|gb|ACV26953.1| 2-oxoglutarate dehydrogenase, E1 subunit [Kangiella koreensis DSM 16069] Length = 939 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 15/212 (7%) Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC-----VVCFGDGA-AN 193 +GG +H+ F H + + V LG+ A + RR DK C ++ GD A Sbjct: 312 EGGPVHL---ALAFNPSHLEIVSPVVLGS--VRARQERRKDKDCDQVIPILIHGDSAITG 366 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG V E+FN++ + I+V+ NNQ TS + T + + P V Sbjct: 367 QGVVMETFNMSQARGFYIGGSIHVVINNQVGFTTSKLHDTRSTAYCTDVAKMIEAPVFHV 426 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHD 309 +G D AV A+ + + K ++I+++ YR GH+ +D N +++ + Sbjct: 427 NGDDPEAVLYVSRLALEFRKKFKKDVVIDLVCYRRHGHNEADEPNATQPLMYQKIKKHPT 486 Query: 310 PIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 P + RL+ N S GD K++ + R +++ Sbjct: 487 PRKIYEDRLVDNNVVSSGDAKKMLDDYRDLLD 518 >gi|327403294|ref|YP_004344132.1| 2-oxoglutarate dehydrogenase, E1 subunit [Fluviicola taffensis DSM 16823] gi|327318802|gb|AEA43294.1| 2-oxoglutarate dehydrogenase, E1 subunit [Fluviicola taffensis DSM 16823] Length = 907 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 8/192 (4%) Query: 169 GIAFA---NKYRRSDKIC-VVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQY 220 GIA A N ++ +K+C V+ GD A A QG VYE +A L I+V+ NNQ Sbjct: 305 GIARAKLDNHFQDENKVCPVMIHGDAAVAGQGIVYEVIQMALLDGYRAGGTIHVVVNNQV 364 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 T+ A + T + + P V+G DI AV TM+ A+ Y + + I++L Sbjct: 365 GFTTNFHDARSSTYCTDVAKTTLTPVFHVNGDDIEAVIQTMEIAMEYRQKFHRDVFIDLL 424 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YR GH+ D + N + + +P + K+LL S K IE + Sbjct: 425 CYRKYGHNEGDEPKFTQPNLYNIIAKHPNPKDIYLKQLLAEGSLSAETAKTIEDEYNAHL 484 Query: 341 NNSVEFAQSDKE 352 + E A+ +++ Sbjct: 485 ESEFETARKNEK 496 >gi|291336119|gb|ADD95702.1| hypothetical protein [uncultured organism MedDCM-OCT-S01-C7] Length = 87 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/77 (45%), Positives = 44/77 (57%) Query: 71 QLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELT 130 +LY + GF HL GQEA+ VG +LT D I AYR HG G +I+AE+ Sbjct: 7 KLYKQAQIRGFLHLYDGQEAICVGHDNALTREDAFIGAYRIHGWAYMRGFSVHEIIAEMM 66 Query: 131 GRQGGISKGKGGSMHMF 147 G+ G S GKGGSMH + Sbjct: 67 GKITGGSDGKGGSMHYY 83 >gi|149181241|ref|ZP_01859740.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Bacillus sp. SG-1] gi|148851140|gb|EDL65291.1| pyruvate dehydrogenase E1 (lipoamide) alpha subunit [Bacillus sp. SG-1] Length = 145 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 1/116 (0%) Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS-DPANYRTREEINEM 304 G+++DG DI AV KA+ R +GP +IE +T+RY H+ + DP YR + E +E Sbjct: 5 GVRIDGNDIFAVYFETLKALERARNGEGPTLIEAVTWRYGAHTTADDPTKYRDQSESDER 64 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 R DPI ++++ + W + ++ ++ +VE +S E DP ++ Sbjct: 65 RKLGDPIARLQRYMERQGWWDQEWADSVQKEYTAEMDQAVEELESYPEADPKVIFD 120 >gi|255646507|gb|ACU23731.1| unknown [Glycine max] Length = 318 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/139 (24%), Positives = 65/139 (46%) Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 +G+EAV + +L D ++ YRE G +L G + + + G KG+ +H Sbjct: 178 MGEEAVNIASAAALAPDDIILLQYREPGVLLWRGFTLQQFVHQCFGNTHDFGKGRQMPIH 237 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 S ++ ++ + Q+ G A++ K V GDGA ++G + + N AA Sbjct: 238 YGSNQHNYFTVSSPIATQLPQAVGAAYSLKMDGKSACAVTFCGDGATSEGDFHAAMNFAA 297 Query: 206 LWNLNVIYVIENNQYAMGT 224 + V+++ NN +A+ + Sbjct: 298 VMEAPVVFICRNNGWAISS 316 >gi|225574551|ref|ZP_03783161.1| hypothetical protein RUMHYD_02628 [Blautia hydrogenotrophica DSM 10507] gi|225038238|gb|EEG48484.1| hypothetical protein RUMHYD_02628 [Blautia hydrogenotrophica DSM 10507] Length = 289 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 1/110 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A A K R D V GDG ++GQ++E+ A+ W L N+ +I+ Sbjct: 131 GSLGQGLSCGVGMALAAKRRGEDYRVFVLTGDGELDEGQIWEAVMAASAWKLDNLTMMID 190 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 NN+ + + N +++ F ++DG D+ + T+DK A Sbjct: 191 NNRLQLDGPCEQLIPHLNLTQKMREFGFETYEIDGNDMGEIVETLDKIKA 240 >gi|119384344|ref|YP_915400.1| transketolase, central region [Paracoccus denitrificans PD1222] gi|119374111|gb|ABL69704.1| Transketolase, central region [Paracoccus denitrificans PD1222] Length = 693 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/248 (23%), Positives = 108/248 (43%), Gaps = 28/248 (11%) Query: 91 VIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK 150 +++G+++ D + YR +LA G++ ++ + R GG S G+ + +F+ Sbjct: 62 ILLGLQLD-DPHDAVCGYYRSRPMLLALGLEPTEALVSAMARSGGYSDGRDIGV-VFNLP 119 Query: 151 NGFYGG------HGIVGAQVSLGTGIAFANKYRRS-------DK-ICVVCFGDGAANQGQ 196 N GG G VG Q + G A A +Y D+ I V GDG+ Sbjct: 120 NP--GGPSALPMSGGVGTQYTPTAGWAQAIRYHAEVLGQPGYDRAIAVALGGDGSVASNG 177 Query: 197 VYESFNIAALWNLNVIYVIENNQYAM----GTSVSRASAQTNFSK-RGVSFNIPGMQVDG 251 + + A + L +++ IE+N Y + G V + N S +G++ + DG Sbjct: 178 FWSALGAATVGRLPMLFCIEDNGYGISVPSGVQVPGGNIAANLSGWQGLAI----LDGDG 233 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPI 311 D +AV + R + P+++ + R +GHS D Y+ +E + S DP+ Sbjct: 234 ADPAEAAVLTAEAVDHVRDSRAPVLLRLSVPRLQGHSYQDTQGYKPQELVAREWSR-DPL 292 Query: 312 EQVRKRLL 319 ++ L+ Sbjct: 293 PRLHAHLV 300 >gi|87122580|ref|ZP_01078458.1| putative pyruvate dehydrogenase E1 component,alpha and beta subunits protein [Marinomonas sp. MED121] gi|86162117|gb|EAQ63404.1| putative pyruvate dehydrogenase E1 component,alpha and beta subunits protein [Marinomonas sp. MED121] Length = 720 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 113/262 (43%), Gaps = 21/262 (8%) Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKNG--FYGGHGIVGAQ 163 YR +L+ G+ +A + GG S G+ + + +NG + G VG+Q Sbjct: 95 YRSRPFVLSLGLSMDDALASGMAKSGGYSDGRDIGVVCNYANQERNGAMLFPMCGGVGSQ 154 Query: 164 VSLGTGIAFANKYRRSD--------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 S +G A + Y R I + GD + + + + NI+ NL ++ I Sbjct: 155 YSPISGWAQSIVYYRDQLKDDAYKGAIGLSMGGDSSMSTSGFWAALNISTTNNLPHLFYI 214 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSF----NIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 E+N Y G SV + + QT + + N+ + DG D A +++AV Y R+ Sbjct: 215 EDNGY--GISVPQ-TVQTPGGDQVANLAAYKNLKIIDGDGTDPYTAPALIEEAVEYVRSG 271 Query: 272 KGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 KG ++ + R GH+ D Y+ + + + ++ DP+ ++R+ L E + Sbjct: 272 KGTCLLRLKVPRLCGHTFQDTQTYKPADLLVQEKT-QDPLPKLREFLQDKGIMDEQQWRA 330 Query: 332 IEMNVRKIINNSVEFAQSDKEP 353 +E K + +V + EP Sbjct: 331 LEAQTHKEVLAAVARVKLRPEP 352 >gi|149921729|ref|ZP_01910177.1| pyruvate dehydrogenase (lipoamide) [Plesiocystis pacifica SIR-1] gi|149817467|gb|EDM76939.1| pyruvate dehydrogenase (lipoamide) [Plesiocystis pacifica SIR-1] Length = 308 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 24/254 (9%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EAV V + + E D + R+ L G+ ++I+ +L G+ ++G+G + Sbjct: 62 GEEAVSVAVGSLVGEEDWVFVGNRDAAVALTRGLPLTEILRQLLGQASAETRGRGLPGSL 121 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 S ++ G +G + L G A + + V FG+G G +ES +A Sbjct: 122 SSREHKLMGASEALGMNLGLAVGHAHGQRLFSRGRASVAIFGEGLTTTGMFHESLALALA 181 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 +++V ++ + G + ++R + + + DG D V+ + A A Sbjct: 182 HTAPMVFVCKSQLWPEGAPAEAGLMGDSVAERVRARGMWSRRCDGADAVGVRRAI--AAA 239 Query: 267 YCRAH--KGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK-- 322 RAH GP ++E++ DP R DP+E+VR RLL ++ Sbjct: 240 LHRAHDGAGPGLVEVVVTPL----AQDPPAER------------DPVERVR-RLLDSRGE 282 Query: 323 WASE-GDLKEIEMN 335 W D+ E E++ Sbjct: 283 WTQPFQDVTEAEIH 296 >gi|42522535|ref|NP_967915.1| 3-methyl-2-oxobutanoate dehydrogenase [Bdellovibrio bacteriovorus HD100] gi|39575067|emb|CAE78908.1| 3-methyl-2-oxobutanoate dehydrogenase [Bdellovibrio bacteriovorus HD100] Length = 376 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/325 (21%), Positives = 122/325 (37%), Gaps = 15/325 (4%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMG----MVGGFCHLCIGQEAVIVGMKMSLTEG 102 ++E L + LM+ R EE+ ++Y G +GG G ++ K S E Sbjct: 50 LSEEILLRMHNLMVKSRVLEERLIKIYKAGEAYFWIGGPGEEAWGVALGMLARKGSGPEN 109 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKG-KGGSMHMFSTKNGFYGGHGIVG 161 D + YR ++A G+D + + R S G + S H + + Sbjct: 110 DWLHLHYRCTPTMVALGMDMIDSIRLMMNRATDPSTGGRNFSSHYCFPQWNVAPVTSPLE 169 Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL--WNLNVIYVIENNQ 219 Q + G A K I +V GD +G +A+ L ++ ++NN Sbjct: 170 VQYPIACGTAHVQKRAGKGAISIVTGGDAGTAEGDFASCLILASRKGQELPMLITVQNNG 229 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 Y + T +TN + R +FNI ++G D + + + Y R P IE Sbjct: 230 YGISTPYEGQHGETNIADRAAAFNIRSRVINGNDPIETYLALKEEMEYIRKTGKPSFIEA 289 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 R GHS +D AN + DP+ K L+ K+I + Sbjct: 290 KVTRLYGHSSADGANKKPHL--------FDPVLTFEKNLIDAGILDPKVAKKIWEDYEAE 341 Query: 340 INNSVEFAQSDKEPDPAELYSDILI 364 ++ E A+ + P P ++ + + Sbjct: 342 GVSAQEQARQEPVPTPESVWDHVYV 366 >gi|330469474|ref|YP_004407217.1| transketolase domain-containing protein [Verrucosispora maris AB-18-032] gi|328812445|gb|AEB46617.1| transketolase domain-containing protein [Verrucosispora maris AB-18-032] Length = 874 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 19/195 (9%) Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWN-----LNVIYVIENNQYAMGTSVSRASAQT 233 D I V FGD A N +FN A ++ + V++V E+N + T Sbjct: 306 PDAIVVCSFGDAAINHADATAAFNTAGWYDHTGLRIPVLFVCEDNGLGGSLRSPQGWVAT 365 Query: 234 NF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +K G+ + DG D+ A +A A+ R H+ P ++ + T R GH +D Sbjct: 366 ALRAKPGIRY----FAADGADLVATYEVAREAAAWVRRHRRPAVLHLSTVRLLGHVGADA 421 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL----KEIEMNVRKIINNSVEFA 347 + YR+ EEI + DP+ +RL+ A +L EI +R++ ++ Sbjct: 422 ESAYRSAEEIAADLAG-DPLVATARRLVEAGLAGGAELLDRYDEIGWQIRRLAEQVLD-- 478 Query: 348 QSDKEPDPAELYSDI 362 K +PAE+ + + Sbjct: 479 -EPKLSNPAEVIAPL 492 >gi|19112564|ref|NP_595772.1| 2-oxoglutarate dehydrogenase (lipoamide) (e1 component of oxoglutarate dehydrogenase complex) (predicted) [Schizosaccharomyces pombe 972h-] gi|74626854|sp|O74378|ODO1_SCHPO RecName: Full=2-oxoglutarate dehydrogenase, mitochondrial; AltName: Full=2-oxoglutarate dehydrogenase complex component E1; Short=OGDC-E1; AltName: Full=Alpha-ketoglutarate dehydrogenase; Flags: Precursor gi|3417411|emb|CAA20299.1| 2-oxoglutarate dehydrogenase (lipoamide) (e1 component of oxoglutarate dehydrogenase complex) (predicted) [Schizosaccharomyces pombe] Length = 1009 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 33/297 (11%) Query: 87 GQEAVIVGMKM----SLTEGDQMIT---AYREHGHILACGV--DASKIMAELTGRQGGIS 137 G EA++ GMK S+ EG I A+R ++L V A I +E G Q Sbjct: 275 GCEAMVPGMKALIDRSVDEGISNIVIGMAHRGRLNLLHNIVRKPAQAIFSEFRGTQDPDD 334 Query: 138 KGKG------GSMHMFSTKNGFYGGHGIVG------AQVSLGTGIAFANKYRRSDK---- 181 +G G G + T +G +V A+ + G A ++ SD+ Sbjct: 335 EGSGDVKYHLGMNYQRPTPSGKRVSLSLVANPSHLEAEDPVVLGKVRAIQHYTSDEASHE 394 Query: 182 --ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF 235 + ++ GD A A QG VYE+F + AL + ++++ NNQ T A + Sbjct: 395 QSMGILIHGDAAFAAQGVVYETFGLHALPGYSTGGTVHIVINNQIGFTTDPRFARSTPYC 454 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + S P V+G D+ AV A + +A K ++++++ YR GH+ +D ++ Sbjct: 455 TDIAKSMEAPIFHVNGDDVEAVTFICQLAADWRKAFKTDVVVDIVCYRRHGHNETDQPSF 514 Query: 296 RTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 T+ + + + H P ++ ++LL K S+ ++ E V I+ +S E +++ K Sbjct: 515 -TQPRMYKAIAKHPPTFKIYTQQLLQEKTVSKAEVDAQEKRVWDILESSFESSKNYK 570 >gi|254796932|ref|YP_003081769.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Neorickettsia risticii str. Illinois] gi|254590180|gb|ACT69542.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Neorickettsia risticii str. Illinois] Length = 902 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 4/172 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A + QG VYE+ + L N VI++I NNQ TS Q S G Sbjct: 327 VLLHGDAAFSGQGVVYETMLLEELPNYESGGVIHIILNNQIGFTTSPRDVRKQHYPSFIG 386 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 SF+IP V+G D AV A + II++++YR GH+ D + E Sbjct: 387 ESFDIPIFHVNGDDPEAVFYVTLLAAEFRNTFNKSAIIDIISYRRYGHNEIDEPKFTQPE 446 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + + + ++ +RL+ S+ E+ N R +++ ++ A++ K Sbjct: 447 MYDVIEGHKRSVDIYAERLIKEGVISQDKFVELTQNFRGLLDKELKEAKTYK 498 >gi|224034853|gb|ACN36502.1| unknown [Zea mays] Length = 129 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 1/90 (1%) Query: 274 PIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 PI++E LTYR HS SD + YR +EI R+ DPI + RK + N W S+ + E+ Sbjct: 8 PILVEALTYRVGHHSTSDDSTKYRPVDEIEHWRTARDPISRYRKWVQGNDWWSDAEESEL 67 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 VRK + +++ A+ +P EL++D+ Sbjct: 68 RSRVRKELLQAIQVAERMPKPPVTELFTDV 97 >gi|103488439|ref|YP_618000.1| transketolase, central region [Sphingopyxis alaskensis RB2256] gi|98978516|gb|ABF54667.1| branched-chain alpha-keto acid dehydrogenase E1 component [Sphingopyxis alaskensis RB2256] Length = 733 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 24/202 (11%) Query: 160 VGAQVSLG-------TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW----- 207 VGA S+G TG+ + D + + FGD +AN +FN A W Sbjct: 158 VGAAFSIGIARRLGMTGLPLPD-----DAVVLASFGDASANHSTAQGAFNTAG-WAAYQG 211 Query: 208 -NLNVIYVIENNQYAMGTSVSRASAQTNFSKR-GVSFNIPGMQVDGMDIRAVKATMDKAV 265 + ++++ E+N + T + F R G+ + +Q DG D+ A +A Sbjct: 212 SPMPLVFLCEDNGIGISTRTPAGWIEAQFRHRAGLHY----IQCDGTDLAAAYKGAKEAA 267 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 Y R + P+ + M T R GH+ SD + + E DP+ + ++ W S Sbjct: 268 DYARRTRRPVFLHMATVRLYGHAGSDVQGAYLPKALIEADEARDPLLKGAALMIEQGWMS 327 Query: 326 EGDLKEIEMNVRKIINNSVEFA 347 D+ + + + E A Sbjct: 328 AADVADAYQEIGATLARQAEAA 349 >gi|119775927|ref|YP_928667.1| transketolase, central region [Shewanella amazonensis SB2B] gi|119768427|gb|ABM00998.1| branched-chain alpha-keto acid dehydrogenase E1 component [Shewanella amazonensis SB2B] Length = 761 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 16/121 (13%) Query: 180 DKICVVCFGDGAANQGQVYESFNIAALW------NLNVIYVIENNQYAMGTSVSRASAQT 233 D I + FGD +AN + N AA W + +++V E+N + T + Sbjct: 183 DAIAMCNFGDASANHASAQTAIN-AACWAAFQNIPMPLMFVCEDNGIGISTPTPKGWIGA 241 Query: 234 NFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 NFS+R PG++ DG+D+ +A +CR+H+ P+ + + T R GH+ S Sbjct: 242 NFSQR------PGLKYFCCDGLDLLDTYKVAKEAAHWCRSHRQPVFLHVRTVRLMGHAGS 295 Query: 291 D 291 D Sbjct: 296 D 296 >gi|71082942|ref|YP_265661.1| 2-oxoglutarate dehydrogenase E1 component [Candidatus Pelagibacter ubique HTCC1062] gi|71062055|gb|AAZ21058.1| 2-oxoglutarate dehydrogenase E1 component [Candidatus Pelagibacter ubique HTCC1062] Length = 967 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 10/218 (4%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA---FANKYRRSDKICVVCFGDGA-ANQGQ 196 G S+H+ T N H V LG A F R+ I ++ GD A A QG Sbjct: 330 GNSVHVSLTDNP---SHLEAVNPVVLGQTRAKQFFHKDKERNKVIPILIHGDAAFAGQGV 386 Query: 197 VYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 V E F ++ L N I++I NNQ TS A + S + P + V+G D Sbjct: 387 VTECFAMSGLPGHNTGGTIHIIVNNQIGFTTSPRFARSSPYPSDVAKMVDAPILHVNGDD 446 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 AV A + ++++++ YR GH+ D ++ ++RS+ P+E Sbjct: 447 PEAVVYATRIATEFRLKFNRDVVVDLICYRRFGHNEGDEPSFTQPLMYKKIRSHPTPVEM 506 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 K+L++ SE +L + + + + ++++ + A+ K Sbjct: 507 YGKKLVNENTLSESELSKFKTDFKNLLDDQYKNAKDYK 544 >gi|319787340|ref|YP_004146815.1| transketolase domain-containing protein [Pseudoxanthomonas suwonensis 11-1] gi|317465852|gb|ADV27584.1| Transketolase domain-containing protein [Pseudoxanthomonas suwonensis 11-1] Length = 754 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 27/211 (12%) Query: 165 SLGTGIAFANKYR-------RSDKICVVCFGDGAANQGQVYESFNIAALWNL------NV 211 +LGT +A R D I + FGD +AN +FN AA W V Sbjct: 173 ALGTAVAIEQARRIGHALPVPDDSIAICSFGDASANHATAQTAFNAAA-WTAYQKLPAPV 231 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM---QVDGMDIRAVKATMDKAVAYC 268 ++V E+N +G SV R N+PG+ DG+D+ ++ AV +C Sbjct: 232 LFVCEDN--GIGISVKTPDGWIGNRFR----NMPGLDYFHADGLDLANGYGQVEAAVEHC 285 Query: 269 RAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 R + P + + T R GH+ +D +R+ EE+ + + DP+ + L + S+ Sbjct: 286 RRTRRPTFLHLRTTRIMGHAGTDFEIEWRSIEELCAVEAT-DPLLRSAAIALESGLYSKD 344 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +L E+ + R+ + + ++D+ P A L Sbjct: 345 ELLELYESTRRRCFAAAD--EADRRPKLASL 373 >gi|126459507|ref|YP_001055785.1| transketolase subunit A [Pyrobaculum calidifontis JCM 11548] gi|126249228|gb|ABO08319.1| transketolase subunit A [Pyrobaculum calidifontis JCM 11548] Length = 267 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 7/146 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +SL G+A + R + + GDG ++GQ +ESF +AA + L N++ +++ Sbjct: 117 GSLGQGISLAVGLALGLRLRGEEGRVYLVTGDGELDEGQSWESFAVAAHYGLNNLVTIVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + + + R S +QVDG D+R V +KA R P++ Sbjct: 177 LNDVQLDGHSHEVLKKGDLAGRFKSLGFEVLQVDGHDVREVVEAFEKAEKSDR----PVV 232 Query: 277 IEMLTYRYRG-HSMSDPANYR-TREE 300 I T R RG S+ D A R R+E Sbjct: 233 ILAKTVRGRGVPSIEDTAKQRLPRDE 258 >gi|297838787|ref|XP_002887275.1| hypothetical protein ARALYDRAFT_894802 [Arabidopsis lyrata subsp. lyrata] gi|297333116|gb|EFH63534.1| hypothetical protein ARALYDRAFT_894802 [Arabidopsis lyrata subsp. lyrata] Length = 131 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 42/147 (28%) Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI---IIE 278 MGT+ ++ T + KRG +PG++ G D H P+ I+E Sbjct: 1 MGTAEWMSAKSTAYFKRGD--YVPGLK--GND----------------HHTLPLFEQILE 40 Query: 279 MLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 M TYRY GHSMSDP + YRT +EI+ +R DP ++VRK ++ + A+E +LKE + Sbjct: 41 MDTYRYHGHSMSDPGSTYRTCDEISGVRQVRDPKDRVRKLIISHDIATEKELKESPV--- 97 Query: 338 KIINNSVEFAQSDKEPDPAELYSDILI 364 PD +EL+++I + Sbjct: 98 ---------------PDSSELFTNIYL 109 >gi|313677701|ref|YP_004055697.1| transketolase domain-containing protein [Marivirga tractuosa DSM 4126] gi|312944399|gb|ADR23589.1| Transketolase domain-containing protein [Marivirga tractuosa DSM 4126] Length = 804 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 30/215 (13%) Query: 160 VGAQVSLGTGIAFANKYRRSDK----------------ICVVCFGDGAANQGQVYESFNI 203 AQ+ G+AFA+K R +K + G+ + ++G YES N Sbjct: 144 TAAQMPRLVGLAFASKLFRENKELNKKEFEQYSIDGNEVAFGTIGNASTSEGMFYESINA 203 Query: 204 AALWNLNVIYVIENNQYAMGT---------SVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 A + + ++ I ++ Y + S+S A A +K + I + V+G D Sbjct: 204 AGVLQIPMLISIWDDHYGISVPQEFHTTKGSISEALAGFQRTKDKNGYEI--LTVNGWDY 261 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTY-RYRGHSMS-DPANYRTREEINEMRSNHDPIE 312 A+ T KA R P ++ +L + +GHS S Y+++E ++ + +D + Sbjct: 262 EALVDTYQKAAKISREEHVPSMVHVLEMTQPQGHSTSGSHERYKSKERLD-WEAEYDCLN 320 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 Q RK +L +K ASE +L +IE +K ++ + A Sbjct: 321 QFRKYILDHKIASEKELDKIEEEAKKTAKDAKDAA 355 >gi|1763358|gb|AAB39727.1| pyruvate dehydrogenase E1-alpha- subunit [Homo sapiens] gi|1763360|gb|AAB39728.1| pyruvate dehydrogenase E1-alpha- subunit [Homo sapiens] Length = 59 Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 28/59 (47%), Positives = 42/59 (71%) Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTREEI E+RS DPI ++ R++++ AS +LKEI++ V K I ++ +FA +D EP Sbjct: 1 YRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVXKEIEDAAQFATADPEP 59 >gi|254781051|ref|YP_003065464.1| alpha-ketoglutarate decarboxylase [Candidatus Liberibacter asiaticus str. psy62] gi|254040728|gb|ACT57524.1| alpha-ketoglutarate decarboxylase [Candidatus Liberibacter asiaticus str. psy62] Length = 957 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 6/177 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG V E+F ++ L V I++I NNQ T+ S A + T Sbjct: 367 RSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCT 426 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S S IP V+G D AV + AV++ ++I+++ YR GH+ D Sbjct: 427 YASDISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEP 486 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 ++ +RS+ ++ L+ N+ S+ +L+ + N K + E+ +S+ Sbjct: 487 SFTQPMMYKTIRSHKSVLQLYADSLMKNQVISKQELQSLANNWHKYLE--AEYKESE 541 >gi|254497993|ref|ZP_05110756.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Legionella drancourtii LLAP12] gi|254352770|gb|EET11542.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Legionella drancourtii LLAP12] Length = 745 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 76/316 (24%), Positives = 123/316 (38%), Gaps = 48/316 (15%) Query: 42 FEVSEFNKEQELSAY------RLMLLI-RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG 94 E +E +K+ + + RL+ LI R+ +EK Y +G G + IGQ Sbjct: 30 LETAELDKKTAIDLFDSQIKSRLLDLIARQLKEKGLSFYTIGSSGHEGNALIGQ------ 83 Query: 95 MKMSLTEGDQMITAYREHGHIL-----ACGVDA------SKIMAELTGRQGGISKGKGGS 143 D YR + GVD S + A GG K G Sbjct: 84 ---VFRPEDMAFLHYRSGAFYIQRAKKVPGVDGVRDILLSLVAAACDPISGGRHKVFGSV 140 Query: 144 MHMFSTKNGFYGGH--GIVGAQVSL--GTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 + H +GA +S+ IAF D + + FGD + N Sbjct: 141 PLNIPPQTSTIASHLPKALGAALSIKCAKDIAFPGSLN-PDSVVLCSFGDASTNHASAQT 199 Query: 200 SFNIAAL-----WNLNVIYVIENNQYAMGTSVSRAS---AQTNFSKRGVSFNIPGMQVDG 251 +FN + + L ++++ E+N +G SV + AQ+ ++ G+ + + DG Sbjct: 200 TFNACSWIAQQHYPLPIVFICEDN--GIGISVRTPTNWIAQSIGARPGIHY----IACDG 253 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDP 310 ++I V A +A R K P+ + M R GH+ SD + Y T+ EI E +HDP Sbjct: 254 LNIADVYAKAQEAEYLARIKKQPVFLHMRCVRLLGHAGSDIESQYLTQAEI-EFTESHDP 312 Query: 311 IEQVRKRLLHNKWASE 326 + L W ++ Sbjct: 313 LLHTAGILYREGWMTQ 328 >gi|91762634|ref|ZP_01264599.1| 2-oxoglutarate dehydrogenase E1 component [Candidatus Pelagibacter ubique HTCC1002] gi|91718436|gb|EAS85086.1| 2-oxoglutarate dehydrogenase E1 component [Candidatus Pelagibacter ubique HTCC1002] Length = 967 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 10/218 (4%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA---FANKYRRSDKICVVCFGDGA-ANQGQ 196 G S+H+ T N H V LG A F R+ I ++ GD A A QG Sbjct: 330 GNSVHVSLTDNP---SHLEAVNPVVLGQTRAKQFFHKDKERNKVIPILIHGDAAFAGQGV 386 Query: 197 VYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 V E F ++ L N I++I NNQ TS A + S + P + V+G D Sbjct: 387 VAECFAMSGLPGHNTGGTIHIIVNNQIGFTTSPRFARSSPYPSDVAKMVDAPILHVNGDD 446 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 AV A + ++++++ YR GH+ D ++ ++RS+ P+E Sbjct: 447 PEAVVYATRIATEFRLKFNRDVVVDLICYRRFGHNEGDEPSFTQPLMYKKIRSHPTPVEL 506 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 K+L++ SE +L + + + + ++++ + A+ K Sbjct: 507 YGKKLVNENTLSENELSKFKTDFKNLLDDQYKNAKDYK 544 >gi|229819770|ref|YP_002881296.1| 2-oxoglutarate dehydrogenase, E1 subunit [Beutenbergia cavernae DSM 12333] gi|229565683|gb|ACQ79534.1| 2-oxoglutarate dehydrogenase, E1 subunit [Beutenbergia cavernae DSM 12333] Length = 1294 Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRASAQTNFSK 237 V+ GD A A QG V E+ N++ L +++I NNQ + G S SR++ T Sbjct: 708 VLIHGDAAFAGQGVVTETLNLSQLRGYRTGGTVHIIVNNQVGFTTGASSSRSTLYTTDVA 767 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 +G+ IP +V+G D AV + A AY + +II+M+ YR RGH SM+ Sbjct: 768 KGL--QIPVFRVNGDDPEAVSRVAELAYAYRQEFHKDVIIDMVCYRRRGHNEGDDPSMTQ 825 Query: 292 PANYRTREEINEMRS 306 P Y E +R+ Sbjct: 826 PVMYSLIENKRSVRT 840 >gi|253701991|ref|YP_003023180.1| transketolase [Geobacter sp. M21] gi|251776841|gb|ACT19422.1| Transketolase domain protein [Geobacter sp. M21] Length = 263 Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 12/162 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +SLG G+A A + S V GDG N+G V+E +A+ L N+ +++ Sbjct: 109 GSLGHGLSLGIGMAIAQRGSASPGRVFVILGDGECNEGSVWEGVMLASTLGLSNLTAIVD 168 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + Q N S+R SF VDG D+ A++A + K GP + Sbjct: 169 YNKLQSFGRTNNVINQANMSQRWESFGWEACDVDGHDLEALEAALQK------PQSGPRV 222 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 + T + +G S + R E + N D +EQ L Sbjct: 223 LVAHTVKGKGVSFME-----DRLEWHYKSPNDDQLEQALTEL 259 >gi|331092478|ref|ZP_08341301.1| hypothetical protein HMPREF9477_01944 [Lachnospiraceae bacterium 2_1_46FAA] gi|330400981|gb|EGG80581.1| hypothetical protein HMPREF9477_01944 [Lachnospiraceae bacterium 2_1_46FAA] Length = 278 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K R+ D GDG +GQV+E+ +AA NL N++ +++ Sbjct: 115 GSLGQGISAAVGMAISGKLRKKDYRVYTLLGDGEIQEGQVWEAAMLAAHHNLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + S+ ++ K+ +FN + VDG D A+ A +A Sbjct: 175 NNNLQIDGSIDEVNSPYPIDKKFEAFNFHVINVDGHDFDALDAAFKEA 222 >gi|332559770|ref|ZP_08414092.1| Branched-chain alpha-keto acid dehydrogenase E1 component [Rhodobacter sphaeroides WS8N] gi|332277482|gb|EGJ22797.1| Branched-chain alpha-keto acid dehydrogenase E1 component [Rhodobacter sphaeroides WS8N] Length = 727 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 19/168 (11%) Query: 160 VGAQVSLGTGIAFANKYR--RSDKICVVCFGDGAANQGQVYESFNIAALWN------LNV 211 VGA SLG ++R D + + FGD +AN +FN A W L + Sbjct: 153 VGAAYSLGLARRRPPEHRALPEDALVMASFGDASANHSTAQGAFNTAG-WTAFQSVPLPL 211 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYC 268 ++V E+N + T R + +F R PG++ +G+D+ A +A AY Sbjct: 212 LFVCEDNGIGISTRTPRGWIEASFRAR------PGLRYFRANGLDMSETYAVAAEAAAYV 265 Query: 269 RAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVR 315 R + P + + T R GH+ +D P Y +REE+ +N + VR Sbjct: 266 RNRRKPAFLHLGTVRLYGHAGADLPTTYMSREEVEAEEANDPLLHSVR 313 >gi|168003650|ref|XP_001754525.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694146|gb|EDQ80495.1| predicted protein [Physcomitrella patens subsp. patens] Length = 972 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 40/182 (21%), Positives = 88/182 (48%), Gaps = 4/182 (2%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 + +R + V+ GDG+ + QG VYE+ +++ L N I+++ NNQ A T Sbjct: 339 YGQDKQRLKNMAVILHGDGSFSGQGVVYETLHLSDLPNYTTGGSIHIVVNNQVAFTTDPK 398 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + P V+G D+ AV D A + ++++++ YR GH Sbjct: 399 FSRSSPYCTDVAKALCAPIFHVNGDDVEAVTRVCDLAAKWRCHFLSDVVVDIVCYRRFGH 458 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D + + ++S+ + + K+L+ N + G++++++ V I+N+ E + Sbjct: 459 NEIDEPLFTQPTMYHVIKSHPNSLAIYEKKLIENGLLANGEIEKMKAKVIGILNSEFESS 518 Query: 348 QS 349 ++ Sbjct: 519 KN 520 >gi|77464872|ref|YP_354376.1| branched-chain alpha-keto acid dehydrogenase E1 component [Rhodobacter sphaeroides 2.4.1] gi|77389290|gb|ABA80475.1| branched-chain alpha-keto acid dehydrogenase E1 component [Rhodobacter sphaeroides 2.4.1] Length = 727 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 19/168 (11%) Query: 160 VGAQVSLGTGIAFANKYR--RSDKICVVCFGDGAANQGQVYESFNIAALWN------LNV 211 VGA SLG ++R D + + FGD +AN +FN A W L + Sbjct: 153 VGAAYSLGLARRRPPEHRALPEDALVMASFGDASANHSTAQGAFNTAG-WTAFQSVPLPL 211 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYC 268 ++V E+N + T R + +F R PG++ +G+D+ A +A AY Sbjct: 212 LFVCEDNGIGISTRTPRGWIEASFRAR------PGLRYFRANGLDMSETYAVAAEAAAYV 265 Query: 269 RAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVR 315 R + P + + T R GH+ +D P Y +REE+ +N + VR Sbjct: 266 RNRRKPAFLHLGTVRLYGHAGADLPTTYMSREEVETEEANDPLLHSVR 313 >gi|221640793|ref|YP_002527055.1| Branched-chain alpha-keto acid dehydrogenase E1 component [Rhodobacter sphaeroides KD131] gi|221161574|gb|ACM02554.1| Branched-chain alpha-keto acid dehydrogenase E1 component [Rhodobacter sphaeroides KD131] Length = 727 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 19/168 (11%) Query: 160 VGAQVSLGTGIAFANKYR--RSDKICVVCFGDGAANQGQVYESFNIAALWN------LNV 211 VGA SLG ++R D + + FGD +AN +FN A W L + Sbjct: 153 VGAAYSLGLARRRPPEHRALPEDALVMASFGDASANHSTAQGAFNTAG-WTAFQSVPLPL 211 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYC 268 ++V E+N + T R + +F R PG++ +G+D+ A +A AY Sbjct: 212 LFVCEDNGIGISTRTPRGWIEASFRAR------PGLRYFRANGLDMSETYAVAAEAAAYV 265 Query: 269 RAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVR 315 R + P + + T R GH+ +D P Y +REE+ +N + VR Sbjct: 266 RNRRKPAFLHLGTVRLYGHAGADLPTTYMSREEVEAEEANDPLLHSVR 313 >gi|270157747|ref|ZP_06186404.1| 2-oxoisovalerate dehydrogenase E1 component [Legionella longbeachae D-4968] gi|289163984|ref|YP_003454122.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Legionella longbeachae NSW150] gi|269989772|gb|EEZ96026.1| 2-oxoisovalerate dehydrogenase E1 component [Legionella longbeachae D-4968] gi|288857157|emb|CBJ10973.1| putative pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Legionella longbeachae NSW150] Length = 745 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 17/195 (8%) Query: 179 SDKICVVCFGDGAANQGQVYESFNIAAL-----WNLNVIYVIENNQYAMGTSVSRASAQT 233 SD + + FGD + N + N + + L ++++ E+N + R + Sbjct: 179 SDSVILCSFGDASTNHASAQATLNACSWMAQQNYPLPIVFICEDNGIGISVPTPRDWIER 238 Query: 234 NFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + R PG+ DG++I A +A R K P+ + M R GH+ S Sbjct: 239 SIGAR------PGLHYLSCDGLNIADAYAVAQEAEYLARIKKQPVFLHMRCVRLLGHAGS 292 Query: 291 D-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN-NSVEFAQ 348 D + Y T+EEI E R DP+ L W S D+ + N + +I +VE + Sbjct: 293 DIESQYCTQEEI-EAREADDPLLHTAGLLYQEGWMSIQDMLSLYQNNKDLIEAKAVEAIR 351 Query: 349 SDKEPDPAELYSDIL 363 K E+ S ++ Sbjct: 352 QPKLSSADEIMSSLI 366 >gi|114707321|ref|ZP_01440218.1| 2-oxoglutarate dehydrogenase, E1 component [Fulvimarina pelagi HTCC2506] gi|114537202|gb|EAU40329.1| 2-oxoglutarate dehydrogenase, E1 component [Fulvimarina pelagi HTCC2506] Length = 995 Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 5/185 (2%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 +RS + ++ GD A A QG V E FN++AL V I+ I NNQ T+ + + Sbjct: 392 QRSKVLPLLLHGDAAFAGQGVVPECFNLSALRGHRVAGSIHFIINNQIGFTTNPRFSRSS 451 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 452 PYPSDVAKMVEAPIFHVNGDDPEAVVYAAKIATEFRMKFHKPVVIDMFCYRRHGHNEGDE 511 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 + + +R++ +E K+L+ ++ D+ + + RK ++ E +QS K Sbjct: 512 PAFTQPKMYKVIRNHPTTLEVYSKKLVEEGLLTQQDVDDRIADFRKSLDEDFEASQSYK- 570 Query: 353 PDPAE 357 P+ A+ Sbjct: 571 PNKAD 575 >gi|126463714|ref|YP_001044828.1| transketolase, central region [Rhodobacter sphaeroides ATCC 17029] gi|126105378|gb|ABN78056.1| branched-chain alpha-keto acid dehydrogenase E1 component [Rhodobacter sphaeroides ATCC 17029] Length = 727 Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 19/168 (11%) Query: 160 VGAQVSLGTGIAFANKYR--RSDKICVVCFGDGAANQGQVYESFNIAALWN------LNV 211 VGA SLG ++R D + + FGD +AN +FN A W L + Sbjct: 153 VGAAYSLGLARRRPPEHRALSEDALVMASFGDASANHSTAQGAFNTAG-WTAFQSVPLPL 211 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYC 268 ++V E+N + T R + +F R PG++ +G+D+ A +A AY Sbjct: 212 LFVCEDNGIGISTRTPRGWIEASFRAR------PGLRYFRANGLDMSETYAVAAEAAAYV 265 Query: 269 RAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVR 315 R + P + + T R GH+ +D P Y +REE+ +N + VR Sbjct: 266 RNRRRPAFLHLGTVRLYGHAGADLPTTYMSREEVEAEEANDPLLHSVR 313 >gi|110638391|ref|YP_678600.1| transketolase [Cytophaga hutchinsonii ATCC 33406] gi|110281072|gb|ABG59258.1| transketolase [Cytophaga hutchinsonii ATCC 33406] Length = 802 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 83/355 (23%), Positives = 144/355 (40%), Gaps = 51/355 (14%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KE+ L YRL R+ A + MG F G+E + M EGD Sbjct: 12 LTKEEILQDYRLACESRQTSILARKEVFMGK-AKFGIFGTGKELAQICMAKFFKEGDFRS 70 Query: 107 TAYREHGHILACG-VDASKIMAELTGRQG-GISKGKGGSMHM--FSTKNGFYGGH----- 157 YR+ ++A G + + A+L G GG M + +ST+N G Sbjct: 71 GYYRDQTFVMATGELSIEQYFAQLYGHADVNHDPHSGGRMMIGHYSTRNLDEQGRFKDLT 130 Query: 158 ---------GIVGAQVSLGTGIAFANKYRRSD--------------KICVVCFGDGAANQ 194 GAQ+ G+A+A+K R++ ++ G+GA + Sbjct: 131 KIKVSTPDISPTGAQMPRLVGLAWASKLFRNNPELQSMTNFSHNGNEVAFGTIGNGAMAE 190 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN-------IPGM 247 G +E+ N A + + ++ I ++ YA+ + + + S F I M Sbjct: 191 GVFFEAINAAGVLQIPMLISIWDDAYAISVPQRYQTTKEDISSMFEGFRRDHNERGIEIM 250 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY-RYRGHSMS-DPANYRTREEINEMR 305 +V G D A+ +A CR P+++ + + GHS S Y+T+E ++ Sbjct: 251 KVKGWDYEALCYAYKEATRLCREEHVPVLMHVCEMTQPMGHSTSGSHERYKTKERLD-WE 309 Query: 306 SNHDPIEQVRKRLLHNKWASEGDLKEIEM-NVRKI-------INNSVEFAQSDKE 352 +D ++ R+ +L N +E DL +IE +V K+ +N V++ + D E Sbjct: 310 EEYDCNKKFREWILENGVCTEDDLLKIEAESVEKVKLARQRAWDNFVKYLKDDHE 364 >gi|91794367|ref|YP_564018.1| transketolase, central region [Shewanella denitrificans OS217] gi|91716369|gb|ABE56295.1| branched-chain alpha-keto acid dehydrogenase E1 component [Shewanella denitrificans OS217] Length = 761 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 16/152 (10%) Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRASAQT 233 D I V FGD +AN + N AA W L +++V E+N + T + Sbjct: 180 DSIVVCNFGDASANHASAQTAIN-AACWTAYQQVPLPLLFVCEDNGIGISTRTPKGWITA 238 Query: 234 NFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 NFS+R PG++ DG D+ +A Y R H+ P+ + + T R GH+ S Sbjct: 239 NFSQR------PGLKYFYCDGRDLLDTYRVGKQAADYARKHRKPVFLHVRTVRLMGHAGS 292 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 D +++ DP+ ++L+ K Sbjct: 293 DAEIAYMKKDYILQNEAQDPLLVSAQQLIEAK 324 >gi|269957271|ref|YP_003327060.1| 2-oxoglutarate dehydrogenase, E1 subunit [Xylanimonas cellulosilytica DSM 15894] gi|269305952|gb|ACZ31502.1| 2-oxoglutarate dehydrogenase, E1 subunit [Xylanimonas cellulosilytica DSM 15894] Length = 1267 Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 60/132 (45%), Gaps = 10/132 (7%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG V E N+A L I+VI NNQ T S + + T + Sbjct: 686 ILVHGDAAFAGQGVVPEVLNLAQLRGYRTGGTIHVIVNNQVGFTTGPSSSRSTTYATDIA 745 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSDPA 293 F IP + V+G D AV + A AY ++I+M+ YR RGH SM+ P Sbjct: 746 KGFQIPVLHVNGDDPEAVVRVAELAFAYREQFDRDVVIDMICYRRRGHNEGDDPSMTQPL 805 Query: 294 NYRTREEINEMR 305 Y E +R Sbjct: 806 MYNLIESKRSVR 817 >gi|1763364|gb|AAB39730.1| pyruvate dehydrogenase E1-alpha- subunit [Homo sapiens] Length = 59 Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 28/59 (47%), Positives = 40/59 (67%) Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTREEI E+RS DPI ++ R++++ AS +LKEI V K I ++ +FA +D EP Sbjct: 1 YRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIXXEVXKEIEDAAQFATADPEP 59 >gi|296270128|ref|YP_003652760.1| transketolase central region [Thermobispora bispora DSM 43833] gi|296092915|gb|ADG88867.1| Transketolase central region [Thermobispora bispora DSM 43833] Length = 790 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 24/209 (11%) Query: 160 VGAQVSLGTGIAFANKYRRS---------DKICVVCFGDGAANQGQVYESFNIAAL---- 206 + + + G+AFA + R+ D I V FGD + N FN AA Sbjct: 205 IASHLPRAVGVAFAIERARALGLSTRWPEDAIVVCSFGDASVNHASALTGFNTAAYTRFR 264 Query: 207 -WNLNVIYVIENNQYAMGTSVSRASAQTNFSK-RGVSFNIPGMQVDGMDIRAVKATMDKA 264 L V++V E+N +G SV ++ RG+ + DG D+ +A Sbjct: 265 GLRLPVLFVCEDN--GIGISVKTPPGWVEQARHRGLEY----FAADGCDLAEAYDAACRA 318 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 Y R+ + P + + T R GH+ SD YRTR+EI DP+ + L+ Sbjct: 319 AEYVRSTRAPAFLHLRTVRLMGHAGSDVEIAYRTRKEI-AADLERDPLVGTARLLVAAGL 377 Query: 324 ASEGDL-KEIEMNVRKIINNSVEFAQSDK 351 A +L K E ++ ++E A+ + Sbjct: 378 AQPDELVKRYEAEREHVLALAMECARRPR 406 >gi|326771984|ref|ZP_08231269.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Actinomyces viscosus C505] gi|326638117|gb|EGE39018.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Actinomyces viscosus C505] Length = 1275 Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 10/132 (7%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ N++ L ++++ NNQ T + A + T + Sbjct: 664 VLVHGDAAFAGQGVVYETLNMSQLPAYRTGGTVHIVVNNQIGFTTGSASARSTTYATDLA 723 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSDPA 293 +P V+ D V T A Y R +II+++ YR RGH SM+ P Sbjct: 724 KGLQVPIFHVNADDPETVARTARHAYEYRRTFHKDVIIDLICYRRRGHNEGDDPSMTQPL 783 Query: 294 NYRTREEINEMR 305 YR + ++ R Sbjct: 784 MYRLIDSLDSTR 795 >gi|163739883|ref|ZP_02147290.1| dehydrogenase/transketolase family protein [Phaeobacter gallaeciensis BS107] gi|161386917|gb|EDQ11279.1| dehydrogenase/transketolase family protein [Phaeobacter gallaeciensis BS107] Length = 675 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 21/196 (10%) Query: 134 GGISKGKGGSMHMFSTKNGFYGGH--GIVGAQVSLGTGIAFANKYR--RSDKICVVCFGD 189 GG K G M + H VGA S+G ++R D + + FGD Sbjct: 72 GGRHKVLGSKALMIPPQTSTIASHLPKAVGAAYSIGAARRHDPEHRVLAEDGLVMCSFGD 131 Query: 190 GAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 +AN + N A W L +++V E+N + + + + S R Sbjct: 132 ASANHSTAQGAINTAC-WTSVQSTPLPLLFVCEDNGIGISVKTPKGWIEASMSHR----- 185 Query: 244 IPGM---QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTRE 299 PGM Q DG+++ AT A Y R + P + + T R GH+ +D P Y ++ Sbjct: 186 -PGMRYFQADGLNMHDGYATAQAAADYVRLRRKPAFLHLRTVRLYGHAGADVPTTYLSKA 244 Query: 300 EINEMRSNHDPIEQVR 315 E+ +N + VR Sbjct: 245 EVEADEANDPLLHSVR 260 >gi|269837788|ref|YP_003320016.1| Transketolase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269787051|gb|ACZ39194.1| Transketolase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 284 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 4/130 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G A A + D V GDG +GQV+E+ AA + N+I +++ Sbjct: 130 GSLGQGLSIGLGHALAARLDGRDYQVYVMLGDGEIQEGQVWEAAMAAAHQKVNNLIAIVD 189 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN Y ++VS+ + + + +F +++DG D+ V+ D +A GP++ Sbjct: 190 NNGYQQTSAVSQVTDPALYDDKWAAFGWKVLEIDGHDLGQVR---DALIAARDEKSGPVV 246 Query: 277 IEMLTYRYRG 286 I T + +G Sbjct: 247 IIAHTVKGKG 256 >gi|219122190|ref|XP_002181434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407420|gb|EEC47357.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 207 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 4/160 (2%) Query: 175 KYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRAS 230 + R + + ++ GD A A QG VYE+ +A + + +V I+VI NNQ T+ + Sbjct: 8 RRRYRNVLPILLHGDAAFAGQGVVYETMQMAEVPDFDVGGTIHVIINNQIGFTTNPLHSL 67 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + S+ G +FN P +G D AV ++ AV + +IIEM+ YR G + Sbjct: 68 SVPYSSELGKAFNCPTFHCNGDDPLAVSTALETAVEWHHDWGMDVIIEMVCYRCNGPNKL 127 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 D + + E+ + ++ K L+ S+ D+K Sbjct: 128 DQPAFAQPKLYKEISQHPPTLDIFEKGLIEEGTLSKEDVK 167 >gi|218283928|ref|ZP_03489796.1| hypothetical protein EUBIFOR_02392 [Eubacterium biforme DSM 3989] gi|218215507|gb|EEC89045.1| hypothetical protein EUBIFOR_02392 [Eubacterium biforme DSM 3989] Length = 291 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A ANK ++D GDG +GQV+E+ AA + L N+ +++ Sbjct: 135 GSLGQGISCAVGMALANKLDKNDHRIYTVLGDGECQEGQVWEATMSAAHYKLDNLCIIVD 194 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + V + K+ +FN + +DG D ++A + +A R KG P Sbjct: 195 NNNLQIDGHVDEGMSVYPLDKKFEAFNCHVINIDGHDFDQLRAALKEA----RETKGMPT 250 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 251 VIVAKTIKGKGVSF 264 >gi|225867726|ref|YP_002743674.1| transketolase subunit [Streptococcus equi subsp. zooepidemicus] gi|225701002|emb|CAW97756.1| putative transketolase subunit [Streptococcus equi subsp. zooepidemicus] Length = 285 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 14/152 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV-IE 216 G +G +S+ TGIA+A +S GDG N+GQ +E+ +AA L+ +V ++ Sbjct: 120 GSLGQGISVATGIAYAQALEQSPYYTYTIVGDGELNEGQCWEAIQLAAHQQLSHFFVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + + +F ++ +F ++VDG D++A+ + +A+ +HK P Sbjct: 180 DNKKQLDGTTKAICRPGDFVEKFTAFGFESLRVDGRDVQAIFEAI-RALQASSSHK-PKC 237 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNH 308 I + T + +G S E+ M +NH Sbjct: 238 IVLDTVKGQGVS-----------ELESMAANH 258 >gi|254475031|ref|ZP_05088417.1| Dehydrogenase E1 component family protein [Ruegeria sp. R11] gi|214029274|gb|EEB70109.1| Dehydrogenase E1 component family protein [Ruegeria sp. R11] Length = 729 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 21/196 (10%) Query: 134 GGISKGKGGSMHMFSTKNGFYGGH--GIVGAQVSLGTGIAFANKYR--RSDKICVVCFGD 189 GG K G M + H VGA S+G ++R D + + FGD Sbjct: 126 GGRHKVLGSKALMIPPQTSTIASHLPKAVGAAYSIGAARRHDPEHRVLPQDGLVMCSFGD 185 Query: 190 GAANQGQVYESFNIAALW------NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 +AN + N A W L +++V E+N + T + + + S R Sbjct: 186 ASANHSTAQGAINTAC-WASVQSTPLPLLFVCEDNGIGISTKTPKGWIEASMSHR----- 239 Query: 244 IPGM---QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTRE 299 PGM Q DG++I +A Y R + P + + T R GH+ +D P Y ++ Sbjct: 240 -PGMRYFQADGLNIHDTYEVACEAARYVREQRKPAFLHVRTVRLYGHAGADVPTTYLSKA 298 Query: 300 EINEMRSNHDPIEQVR 315 E+ +N + VR Sbjct: 299 EVEADEANDPLLHSVR 314 >gi|229006484|ref|ZP_04164135.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus mycoides Rock1-4] gi|228754768|gb|EEM04162.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus mycoides Rock1-4] Length = 152 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 62/134 (46%) Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENN+YA+ V + A N S R + + +PG VDG D AV + +A R +GP Sbjct: 3 ENNKYAISIPVEKQLACKNVSDRAIGYGMPGYTVDGNDPLAVYKAVKEAADRGRRGEGPT 62 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +IE ++YR HS D +E E D I L +E K++ Sbjct: 63 LIETVSYRLTAHSSDDDDRVYRDKEEVEEAKKKDSIFTFAAYLKEVGVLTEESEKQMLDE 122 Query: 336 VRKIINNSVEFAQS 349 + I+N + E+A++ Sbjct: 123 IMHIVNEATEYAEN 136 >gi|256377866|ref|YP_003101526.1| transketolase [Actinosynnema mirum DSM 43827] gi|255922169|gb|ACU37680.1| Transketolase central region [Actinosynnema mirum DSM 43827] Length = 583 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 18/139 (12%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G+A A + R ++ V GDGA G +E+ N A+ +L V+ V+ +N + G Sbjct: 126 LSYADGLARAARSRGEERHVVAVVGDGALTGGMAWEALNSIAVSDLPVVVVLNDNGRSHG 185 Query: 224 TS----------VSRASAQTN-FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 + + R +A ++ F+ GV + P VDG DI A ++ A+ R ++ Sbjct: 186 PTAGAVGRHLAALRRGTAVSSVFADLGVRYLGP---VDGHDI----AELEAALTSAREYR 238 Query: 273 GPIIIEMLTYRYRGHSMSD 291 GP+++ LT + GH+ ++ Sbjct: 239 GPVVVHCLTRKGFGHAPAE 257 >gi|126668802|ref|ZP_01739749.1| 2-oxoisovalerate dehydrogenase [Marinobacter sp. ELB17] gi|126626735|gb|EAZ97385.1| 2-oxoisovalerate dehydrogenase [Marinobacter sp. ELB17] Length = 728 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 18/164 (10%) Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRASAQ 232 +D + + FGD + N + N A W + +I+V E+N + T + Sbjct: 175 TDSLVLCSFGDASLNHSTAQGAINTAC-WTAYQGLPMPLIFVCEDNGLGISTPTPQGWVA 233 Query: 233 TNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + R PG+ +G+D+ +A R H+ P+ + M R GH+ Sbjct: 234 ASMANR------PGLNYIACNGLDLVDTWQAASRAAILARTHRQPVFLHMRCVRLYGHAG 287 Query: 290 SDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 SD Y ++ +I M +N DP+ RLL S DL ++ Sbjct: 288 SDAQQAYLSQAQIQAM-TNEDPLAHGAARLLRETRLSRADLGQL 330 >gi|254464986|ref|ZP_05078397.1| Dehydrogenase E1 component family [Rhodobacterales bacterium Y4I] gi|206685894|gb|EDZ46376.1| Dehydrogenase E1 component family [Rhodobacterales bacterium Y4I] Length = 729 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 17/194 (8%) Query: 134 GGISKGKGGSMHMFSTKNGFYGGH--GIVGAQVSLGTGIAFANKYR--RSDKICVVCFGD 189 GG K G M + H VGA S+G +++ D I + FGD Sbjct: 126 GGRHKVLGSKALMIPPQTSTIASHLPKAVGAAYSIGAAKRHQPEHQVLPEDAIVMCSFGD 185 Query: 190 GAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRASAQTNFSKR-GVSF 242 +AN + N A W L +++V E+N + T + + + + R G+ + Sbjct: 186 ASANHSTAQGAINTAG-WTSVQAVPLPLLFVCEDNGIGISTKTPKGWIEASMAHRPGIKY 244 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEI 301 + DG+DI +A Y R K P + + T R GH+ +D P Y + E+ Sbjct: 245 ----FKADGLDIYNAFQVAQEAAEYVRTRKKPAFLHLRTVRLYGHAGADVPTTYLAKAEV 300 Query: 302 NEMRSNHDPIEQVR 315 +N + VR Sbjct: 301 EADEANDPLLHSVR 314 >gi|225869598|ref|YP_002745545.1| transketolase subunit [Streptococcus equi subsp. equi 4047] gi|225699002|emb|CAW92085.1| putative transketolase subunit [Streptococcus equi subsp. equi 4047] Length = 285 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 11/167 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN--VIYVI 215 G +G +S+ TGIA+A +S GDG N+GQ +E+ +AA L+ +++V Sbjct: 120 GSLGQGISVATGIAYAQALEQSPHYTYAIVGDGELNEGQCWEAIQLAAHQQLSHFIVFVD 179 Query: 216 ENNQYAMGTS--VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 +N + GT+ + R +F ++ +F ++VDG D++A+ + +A+ +HK Sbjct: 180 DNKKQLDGTTEAICRPG---DFVEKFTAFGFESLRVDGRDVQAIFEAI-RALQASSSHK- 234 Query: 274 PIIIEMLTYRYRGHSM--SDPANYRTREEINEMRSNHDPIEQVRKRL 318 P I + T + +G S S AN+ R E + ++R L Sbjct: 235 PKCIVLDTVKGQGVSQLESMAANHHLRPTAAEKEMLAAAVRKLRASL 281 >gi|124087857|ref|XP_001346905.1| 2-oxoglutarate dehydrogenase [Paramecium tetraurelia strain d4-2] gi|50057294|emb|CAH03278.1| 2-oxoglutarate dehydrogenase, putative [Paramecium tetraurelia] Length = 964 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 8/168 (4%) Query: 184 VVCFGDGA-ANQGQVYESF---NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYES N+ N VI+V+ NNQ T+ + + + Sbjct: 352 IIIHGDAAMAGQGVVYESLQLENLTGYSNEGVIHVVVNNQIGFTTTPIDSRSGLYCTDVA 411 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + ++P + V+ D V+ AV + + K I+I+++ YR GH+ D + T+ Sbjct: 412 KAIDVPIIHVNADDPDLVEEIFKIAVRFRQQFKKDIVIDLIGYRRYGHNEQDQPAF-TQP 470 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 ++ E+ + P+ Q+ + L D E+ K +NNS+E A Sbjct: 471 QMYEIINKQKPVFQLYDQQLRKNGVITDDFASTEI---KKLNNSLETA 515 >gi|145474809|ref|XP_001423427.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124390487|emb|CAK56029.1| unnamed protein product [Paramecium tetraurelia] Length = 957 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 8/168 (4%) Query: 184 VVCFGDGA-ANQGQVYESF---NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYES N+ N VI+V+ NNQ T+ + + + Sbjct: 352 IIIHGDAAMAGQGVVYESLQLENLTGYSNEGVIHVVVNNQIGFTTTPIDSRSGLYCTDVA 411 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + ++P + V+ D V+ AV + + K I+I+++ YR GH+ D + T+ Sbjct: 412 KAIDVPIIHVNADDPDLVEEIFKIAVRFRQQFKKDIVIDLIGYRRYGHNEQDQPAF-TQP 470 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 ++ E+ + P+ Q+ + L D E+ K +NNS+E A Sbjct: 471 QMYEIINKQKPVFQLYDQQLRKNGVITDDFASTEI---KKLNNSLETA 515 >gi|170725397|ref|YP_001759423.1| transketolase central region [Shewanella woodyi ATCC 51908] gi|169810744|gb|ACA85328.1| Transketolase central region [Shewanella woodyi ATCC 51908] Length = 747 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 17/156 (10%) Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALW------NLNVIYVIENNQYAMGTSVSRASAQ 232 SD + + FGD +AN + N +A W L ++++ E+N + T + Sbjct: 179 SDSVVLCNFGDASANHASAQSAIN-SACWAAYQQVPLPLVFICEDNGIGISTRTPKGWIA 237 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 +FS+R ++ DG DI +A Y R H+ P+ + + T R GH+ SD Sbjct: 238 ASFSQRA---SLKYFYCDGRDILDTYKVSREAADYARVHRKPVFLHVRTVRLMGHAGSDA 294 Query: 293 A-NYRTREEINEMRSNHDPI-----EQVRKRLLHNK 322 Y +E I E + DP+ + + RL+++K Sbjct: 295 EIAYMKKEHIFENEA-QDPLIVTAQQLIEARLMNSK 329 >gi|329945368|ref|ZP_08293131.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Actinomyces sp. oral taxon 170 str. F0386] gi|328528990|gb|EGF55921.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Actinomyces sp. oral taxon 170 str. F0386] Length = 1268 Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 10/132 (7%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ N++ L ++VI NNQ T + A + + Sbjct: 652 VLVHGDAAFAGQGVVYETLNMSQLPAYRTGGTVHVIVNNQIGFTTGSASARSTIYATDLA 711 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSDPA 293 +P V+ D V T A Y R +II+++ YR RGH SM+ P Sbjct: 712 KGLQVPIFHVNADDPETVARTARHAYEYRRTFHKDVIIDLICYRRRGHNEGDDPSMTQPL 771 Query: 294 NYRTREEINEMR 305 YR + ++ R Sbjct: 772 MYRLIDSLDSTR 783 >gi|118462818|ref|YP_880139.1| dehydrogenase E1 component superfamily protein [Mycobacterium avium 104] gi|118164105|gb|ABK65002.1| dehydrogenase E1 component superfamily protein [Mycobacterium avium 104] Length = 297 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 75/314 (23%), Positives = 125/314 (39%), Gaps = 57/314 (18%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD--QMIT 107 + L YR M ++R + + + + GQEAV VG +L GD T Sbjct: 7 DDRLEPYRRMWVLRLLDMALDESAVGAAIDDDAPVDFGQEAVAVGAVAALRPGDLVNATT 66 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 H + G+ +AEL G G G GGS K+G + + +LG Sbjct: 67 PRFRHAQQIGLGLPLGPAIAELLGTTRG---GAGGS-----RKSGAADWKQALANESALG 118 Query: 168 TGIAFA----NKYRRSDK----ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 FA N R + +C + D + + + IAA W L V++V++N + Sbjct: 119 QSTLFALGDANAQRMAGDGRVTLCAIAGSD--THSVEFATAAKIAASWRLPVVFVVQNVR 176 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 G R + ++ +P VDG D+ AV ++ +AV + A GP ++E Sbjct: 177 G--GPDARRCAYRSE--------TMPMALVDGRDVVAVGDSVGQAVRHASAGDGPSLVEA 226 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNH----DPIEQVRKRLLHNKWASEGDLKEIEMN 335 +TY R+NH DP+ R+RL+ + L E+E Sbjct: 227 ITY----------------------RTNHPVAIDPLVLARRRLMADG-VDPDRLVEVERG 263 Query: 336 VRKIINNSVEFAQS 349 R ++ ++ A++ Sbjct: 264 ARHLVAEAMACAKA 277 >gi|90421035|ref|ZP_01228938.1| 2-oxoglutarate dehydrogenase, E1 component [Aurantimonas manganoxydans SI85-9A1] gi|90334670|gb|EAS48447.1| 2-oxoglutarate dehydrogenase, E1 component [Aurantimonas manganoxydans SI85-9A1] Length = 994 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 4/176 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG V E F +++L V ++ I NNQ T+ + + Sbjct: 392 RSKIMPLLIHGDAAFAGQGVVAECFGLSSLRGHRVAGSLHFIINNQIGFTTNPRLSRSSP 451 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV + A Y P++I+M YR GH+ D Sbjct: 452 YPSDVAKMVEAPIFHVNGDDPEAVVYAVKVATEYRMKFHKPVVIDMFCYRRYGHNEGDEP 511 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 + +R + +E K+L+ SE D++E + RK + E QS Sbjct: 512 AFTQPIMYKAIRQHPTTLEIYTKKLIAEGVVSEADVEERKAEWRKTLEAEFEAGQS 567 >gi|270261675|ref|ZP_06189948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia odorifera 4Rx13] gi|270045159|gb|EFA18250.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia odorifera 4Rx13] Length = 612 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 87/184 (47%), Gaps = 24/184 (13%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT--GIAFANKYRRSDKICV 184 +TGR+G +S + KGG Y G + S+ G+A A + +R + C+ Sbjct: 82 ITGRRGQMSNLRHKGGISGFPRRDESPYDSFGTAHSSTSISAALGMAHAARLQRQARRCI 141 Query: 185 VCFGDGAANQGQVYESFNIAAL-WNLNVIYVIENNQYAMGTSVSR----------ASAQT 233 GDGA + G +E+ N A L +L ++ ++ +N ++ SV + + Sbjct: 142 AVIGDGALSAGLAFEAMNNATLDPDLPLLVILNDNDMSISPSVGALKQHLVALHGGESAS 201 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG--HSMSD 291 FS G ++ P VDG D+ AT+ A+ R +G ++ ++T + +G H+ +D Sbjct: 202 LFSTLGFDYSGP---VDGHDL----ATLIPALERMRDRRGVQLLHVITRKGQGFSHAEAD 254 Query: 292 PANY 295 P NY Sbjct: 255 PVNY 258 >gi|219120052|ref|XP_002180773.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407489|gb|EEC47425.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 623 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 6/151 (3%) Query: 171 AFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV 226 A A + RS + ++ GD A A QG VYE+ +A + + +V I+VI NNQ T+ Sbjct: 475 ALARRRYRS-VLPILLHGDAAFAGQGVVYETMQMAEVPDFDVGGTIHVIINNQIGFTTNP 533 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + + S+ G +FN P +G D AV ++ AV + +IIEM+ YR G Sbjct: 534 LHSLSMPYSSELGKAFNCPIFHCNGDDPLAVSTALETAVEWRHEWGMDVIIEMVCYRCNG 593 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 + D + T+ ++ + S H P + ++ Sbjct: 594 PNKLDQPAF-TQPKLYKEISQHPPTLDIFEK 623 >gi|159469438|ref|XP_001692870.1| 2-oxoglutarate dehydrogenase, E1 subunit [Chlamydomonas reinhardtii] gi|158277672|gb|EDP03439.1| 2-oxoglutarate dehydrogenase, E1 subunit [Chlamydomonas reinhardtii] Length = 1037 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 89/184 (48%), Gaps = 4/184 (2%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++ + R + ++ GDGA + QG VYE+ +++ L + V I+++ NNQ A T Sbjct: 386 YSEDHERGRHLAILLHGDGAFSGQGIVYETLDMSGLPDYTVGGTIHLVVNNQVAFTTDPK 445 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + S N P V+ D+ +V A + +A K ++++++ YR GH Sbjct: 446 DSRSSPYCTDVAKSLNCPIFHVNADDVESVVRVCQLAAEWRQAWKSDVVVDLVCYRKHGH 505 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D + +++++ + +RL+ ++ +++++ + + +N + E A Sbjct: 506 NEIDEPMFTQPLMYKKIKAHKHSAQLYAERLIAEGTFTKEEVQQVRDRIMQHLNAAFEGA 565 Query: 348 QSDK 351 + K Sbjct: 566 KDYK 569 >gi|88608632|ref|YP_506459.1| alpha-ketoglutarate decarboxylase [Neorickettsia sennetsu str. Miyayama] gi|88600801|gb|ABD46269.1| 2-oxoglutarate dehydrogenase, E1 component [Neorickettsia sennetsu str. Miyayama] Length = 905 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 4/172 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A + QG VYE+ + L N VI++I NNQ TS Q S G Sbjct: 330 VLLHGDAAFSGQGVVYETMLLEELPNYESGGVIHIILNNQIGFTTSPQDVRKQRYPSFIG 389 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 SF+IP V+G D AV A + I+++++YR GH+ D + E Sbjct: 390 ESFDIPIFHVNGDDPEAVFYVTLLAAEFRNTFNKSAIVDIVSYRRHGHNEIDEPRFTQPE 449 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + + + ++ +RL+ S+ E+ N +++ ++ A++ K Sbjct: 450 MYDVIERHKRSVDIYVERLIKEGVISQDKFVELTQNFGGLLDKELKEAKTYK 501 >gi|145475541|ref|XP_001423793.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124390854|emb|CAK56395.1| unnamed protein product [Paramecium tetraurelia] Length = 893 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 5/137 (3%) Query: 164 VSLGTGIAFANKYRRSDKIC-VVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENN 218 VS G A + Y D++ + GD A A QG VYES ++ L N + +++I+NN Sbjct: 279 VSQGKAKAKQDDYGNIDQVLNLQLHGDAAFAGQGIVYESMLLSGLDNYSNGGTVHIIQNN 338 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 Q T++ + S +++ P + V+G D+ + AV Y + K I+I+ Sbjct: 339 QIGYTTNIKDSRFSRYSSDLLLAYRYPILHVNGEDVETLHKVSKFAVEYRQKFKKDILID 398 Query: 279 MLTYRYRGHSMSDPANY 295 ++TYR GH+ D ++ Sbjct: 399 IVTYRKYGHNEVDEPSF 415 >gi|224009017|ref|XP_002293467.1| 2-oxoglutarate dehydrogenase E1 component [Thalassiosira pseudonana CCMP1335] gi|220970867|gb|EED89203.1| 2-oxoglutarate dehydrogenase E1 component [Thalassiosira pseudonana CCMP1335] Length = 1015 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 5/183 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ + + + V ++VI NNQ T+ + + S Sbjct: 388 VPILLHGDAAFAGQGVVYETMQMMGVDDFKVGGTLHVIVNNQIGFTTNPINSRSTPYASD 447 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 G +FN P +G D AV ++ AV + ++I+M+ YR GH+ D + Sbjct: 448 LGKAFNCPIFHCNGDDPVAVSRALETAVEWRHEWGTDVVIDMICYRRNGHNELDQPMFTQ 507 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 + + + +E K+L+ S+ +++EI + E +++ K P P + Sbjct: 508 PKLYKAITRHPSTLEIFEKKLIEEGTMSKEEVEEIRAFTLQSYETDYEASKTYK-PKPED 566 Query: 358 LYS 360 S Sbjct: 567 WLS 569 >gi|198419922|ref|XP_002119259.1| PREDICTED: similar to branched chain ketoacid dehydrogenase E1, alpha polypeptide, partial [Ciona intestinalis] Length = 183 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 4/149 (2%) Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN YA+ T + RG + + ++VDG D AV KA P++ Sbjct: 2 NNGYAISTPAHEQYRGDGIASRGSGYGMLTIRVDGNDTLAVYNATRKARQIALEESRPVL 61 Query: 277 IEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLH--NKWASEGDLKEIE 333 IE +TYR HS SD ++ YRT E+ ++P+ + + + + N W++E D K + Sbjct: 62 IEAMTYRVGDHSTSDDSSTYRTAGELEYWTKTNNPVTRFERYITNERNCWSAEEDEK-LS 120 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + K + + A+ +P P+ +++D+ Sbjct: 121 KDCSKRVIEAFTAAEKRLKPSPSLVFTDV 149 >gi|312131677|ref|YP_003999017.1| transketolase domaiN-containing protein [Leadbetterella byssophila DSM 17132] gi|311908223|gb|ADQ18664.1| Transketolase domain-containing protein [Leadbetterella byssophila DSM 17132] Length = 803 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 49/217 (22%), Positives = 97/217 (44%), Gaps = 25/217 (11%) Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS--------------DKICVV 185 KG +++ KN G Q+ G+A+A+K R+ +++C Sbjct: 127 KGEWVNLKEKKNSVMDVSSTAG-QIPRALGLAYASKLYRNIPELQTENPFSNQGNEVCYA 185 Query: 186 CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN-- 243 GD + +QG +E+ N A + + ++ + ++ Y + +S + + + SK F Sbjct: 186 TIGDASTSQGMFFETINAAGVLQVPLVVSVWDDGYGISVPISYQTVKESISKALEGFRKE 245 Query: 244 -----IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR-GHSMS-DPANYR 296 I + V G D A+ A KA + R H P+++ + + GHS S Y+ Sbjct: 246 NDTNGIKIIAVKGWDYPALVAAYKKAEDWARIHHIPVLVHVQEITQQLGHSASGSHERYK 305 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 + + + + + D + + +L N+ ASE +L++IE Sbjct: 306 SADRL-QWEVDFDCNPRFKAWILENELASESELEDIE 341 >gi|296129070|ref|YP_003636320.1| 2-oxoglutarate dehydrogenase, E1 subunit [Cellulomonas flavigena DSM 20109] gi|296020885|gb|ADG74121.1| 2-oxoglutarate dehydrogenase, E1 subunit [Cellulomonas flavigena DSM 20109] Length = 1250 Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 45/134 (33%), Positives = 63/134 (47%), Gaps = 14/134 (10%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRASAQTNFSK 237 ++ GD A A QG V+E+ N+A L I+VI NNQ + G S SR+S Sbjct: 665 ILIHGDAAFAGQGVVFETLNLAQLRGYRTGGTIHVIVNNQVGFTTGPSSSRSSQYATDVA 724 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 +G+ +P V+G D AV + A Y +II+M+ YR RGH SM+ Sbjct: 725 KGL--QVPIFHVNGDDPEAVVRVAELAFEYREQFDRDVIIDMVCYRRRGHNEGDDPSMTQ 782 Query: 292 PANYRTREEINEMR 305 P Y E +R Sbjct: 783 PLMYNLIEAKRSVR 796 >gi|89891601|ref|ZP_01203105.1| pyruvate/2-oxoglutarate dehydrogenase [Flavobacteria bacterium BBFL7] gi|89516148|gb|EAS18811.1| pyruvate/2-oxoglutarate dehydrogenase [Flavobacteria bacterium BBFL7] Length = 804 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 13/187 (6%) Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 F+NK +++ G+ + ++G +ESFN A + + ++ + +++Y + + Sbjct: 174 FSNK---GNEVAWGTIGNASTSEGHFWESFNAAGVLQVPMVISVWDDEYGISVHARHQTT 230 Query: 232 QTNFSKRGVSFN-------IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM--LTY 282 + + SK F M V G D + T +KA R P++I + LT Sbjct: 231 KESISKIQAGFQRDHEDAGFEIMTVKGWDYVELVETYEKASKIAREEHVPVLIHVQELT- 289 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 + +GHS S E+ + +D Q RK LL N++A++ +L IE +++K + + Sbjct: 290 QPQGHSTSGSHERYKNEDRLDWERTYDCNVQFRKWLLDNEFATDDELSAIEKDIKKQVRD 349 Query: 343 SVEFAQS 349 + A S Sbjct: 350 GKKAAWS 356 >gi|265985491|ref|ZP_06098226.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella sp. 83/13] gi|264664083|gb|EEZ34344.1| 3-methyl-2-oxobutanoate dehydrogenase [Brucella sp. 83/13] Length = 304 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 1/164 (0%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ +R ++ + G F +G+EAV + +L +GD YR+ G ++ Sbjct: 82 RHMMTLRAYDARMMMAQRQGKTS-FYMQHLGEEAVSCAFRKALRKGDMNFPTYRQAGLLI 140 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 A +M ++ + KG+ + S ++GF+ G + Q + G A A+ Sbjct: 141 ADDYPLVTMMNQIFSNEQDPLKGRQLPVMYSSKEHGFFTISGNLATQYTQAVGWAMASAI 200 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 KI GDG+ + + + A+ + V+ I NNQ+ Sbjct: 201 SHDTKIAAAWIGDGSTAESDFHAALVFASTYKAPVVMNIVNNQW 244 >gi|307353529|ref|YP_003894580.1| transketolase domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307156762|gb|ADN36142.1| Transketolase domain protein [Methanoplanus petrolearius DSM 11571] Length = 273 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 16/170 (9%) Query: 151 NGFYGGH------------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 NGF GH G +G +S+ G++ A KY + V GDG ++GQ++ Sbjct: 100 NGFLQGHPDCKIPGVEVSGGSLGQGLSIANGLSIAAKYDNKNSKIYVLLGDGECDEGQIW 159 Query: 199 ESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 E+ ++A + L N+I +++ N + + F+++ SF +++DG D+ + Sbjct: 160 EAAMLSAHYKLDNIIAIVDRNGLQIDGQTEKVMCLEPFARKWESFGWNIIEIDGNDMSQI 219 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSN 307 + A C K P +I T++ +G S + N + NE N Sbjct: 220 INAFKE--AKCLTGK-PTVIIAYTFKGKGVSFMEWVNSFHGKAPNETEMN 266 >gi|262195868|ref|YP_003267077.1| transketolase [Haliangium ochraceum DSM 14365] gi|262079215|gb|ACY15184.1| Transketolase domain protein [Haliangium ochraceum DSM 14365] Length = 730 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 2/156 (1%) Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR-SDKICVVCFGDGAAN 193 G S+G+ H+ G VG Q+ G A K + D + + GDG Sbjct: 113 GYSRGRQMVNHLIEPDIGILPVQSPVGMQLGKAAGYAMGYKLKGIRDGMTMAVIGDGTTA 172 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 + ++E+ N A++W L ++ ++ +N A+ T S NF+ +F + DG D Sbjct: 173 ESDLHEAMNAASVWELPLLILVTDNAVAISTQPSEGRGIKNFAAYAEAFGMAHFSCDGRD 232 Query: 254 IRAVKATMDKAVAYCR-AHKGPIIIEMLTYRYRGHS 288 +A +Y R A G I+ R GHS Sbjct: 233 FHDSFQATCEAASYVREAQAGAIMHVQNLPRLNGHS 268 >gi|254524274|ref|ZP_05136329.1| pyruvate dehydrogenase E1 component, beta subunit, putative [Stenotrophomonas sp. SKA14] gi|219721865|gb|EED40390.1| pyruvate dehydrogenase E1 component, beta subunit, putative [Stenotrophomonas sp. SKA14] Length = 759 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 25/176 (14%) Query: 165 SLGTGIAFANKYR-------RSDKICVVCFGDGAANQGQVYESFNIAALWNL------NV 211 +LGT +A + R +D I + FGD +AN +FN A +W+ V Sbjct: 176 ALGTALAIESGKRLGQPLPIPADSIVLCSFGDASANHATAQTAFNTA-MWSAYQKLPAPV 234 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYC 268 ++V E+N + FS++ PG+ DG+D+ A + AV +C Sbjct: 235 LFVCEDNGLGISVKTPDGWIAERFSRQ------PGLDYFFADGLDLAVGHAQVQAAVEHC 288 Query: 269 RAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 R + P + + T R GH+ +D +R E+ + DP+ + + + + W Sbjct: 289 RRTRRPTFLHLRTTRLMGHAGTDFEVEWRALPELCAAEA-QDPLLRSAQIAMESGW 343 >gi|298706574|emb|CBJ29533.1| Oxoglutarate dehydrogenase, N-terminal part [Ectocarpus siliculosus] Length = 866 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 4/180 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 K + + V+ GD A A QG VYE+ ++ + + V I+VI NNQ T + Sbjct: 354 TKESKQRSMSVLIHGDAAFAGQGVVYETMQLSRVNDFAVGGTIHVIVNNQVGFTTDPRNS 413 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + S G +F IP +G D +V + AV + + + II+M+ YR GH+ Sbjct: 414 RSTEYCSDLGKTFEIPIFHCNGDDPMSVCTAFELAVEWRQQYGEDCIIDMICYRRMGHNE 473 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + ++ + D +LL A++ +L EI+ +V + E ++S Sbjct: 474 IDQPLFTQPVLYKQISQHPDTAAIFESKLLREGVATQDELDEIKNSVVESYEKDFEESKS 533 >gi|198435284|ref|XP_002132037.1| PREDICTED: similar to MGC68840 protein [Ciona intestinalis] Length = 930 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 8/181 (4%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 R S C++ GD + QG V E N++ L + ++ +++I NNQ T ++ + Sbjct: 325 RGSKATCLLLHGDASFTGQGIVMEGLNMSRLPHFDIGGTVHLIVNNQVGFTTPPNKGRSS 384 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 S G P + V+G + V AVAY + ++ III++L +R GH+ D Sbjct: 385 LYTSDIGKMIGCPVIHVNGAEPEQVLRAAKLAVAYRQKYRKEIIIDLLCFRRWGHNELDD 444 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 + + + H ++ +L NK SE +++ + + +N+S SD Sbjct: 445 PTMTQPLMYDVINNRHSIPDEYAGKLKENKILSENEIESWKTEEQSRLNDSF----SDNR 500 Query: 353 P 353 P Sbjct: 501 P 501 >gi|325066817|ref|ZP_08125490.1| alpha-ketoglutarate decarboxylase [Actinomyces oris K20] Length = 1275 Score = 57.0 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 10/132 (7%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ N++ L ++++ NNQ T + A + + Sbjct: 664 VLVHGDAAFAGQGVVYETLNMSQLPAYRTGGTVHIVVNNQIGFTTGSASARSTIYATDLA 723 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSDPA 293 +P V+ D V T A Y R +II+++ YR RGH SM+ P Sbjct: 724 KGLQVPIFHVNADDPETVARTARHAYEYRRTFHKDVIIDLICYRRRGHNEGDDPSMTQPL 783 Query: 294 NYRTREEINEMR 305 YR + ++ R Sbjct: 784 MYRLIDSLDSTR 795 >gi|153003699|ref|YP_001378024.1| 2-oxoglutarate dehydrogenase E1 component [Anaeromyxobacter sp. Fw109-5] gi|152027272|gb|ABS25040.1| 2-oxoglutarate dehydrogenase, E1 subunit [Anaeromyxobacter sp. Fw109-5] Length = 940 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 13/136 (9%) Query: 174 NKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV 226 ++YR +D+ + ++ GD A A QG V ES ++ L V I+VI NNQ TS Sbjct: 332 DRYRDTDRHRSLPILVHGDAAFAAQGVVAESLQMSELEGYAVGGTIHVIVNNQVGFTTSP 391 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 A + T + IP + V+G D+ A+ + AV + + ++I++ TYR G Sbjct: 392 RDARSTTYATGPARMLQIPIIHVNGEDLEAIAQAVLLAVDFRQRFHRDVVIDLWTYRRHG 451 Query: 287 HSMSD------PANYR 296 H+ D P YR Sbjct: 452 HNEGDEPAFTQPVMYR 467 >gi|320534472|ref|ZP_08034942.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Actinomyces sp. oral taxon 171 str. F0337] gi|320133303|gb|EFW25781.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Actinomyces sp. oral taxon 171 str. F0337] Length = 1274 Score = 57.0 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 10/132 (7%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ N++ L ++++ NNQ T + A + + Sbjct: 663 VLVHGDAAFAGQGVVYETLNMSQLPAYRTGGTVHIVVNNQIGFTTGSASARSTIYATDLA 722 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSDPA 293 +P V+ D V T A Y R +II+++ YR RGH SM+ P Sbjct: 723 KGLQVPIFHVNADDPETVARTARHAYEYRRTFHKDVIIDLICYRRRGHNEGDDPSMTQPL 782 Query: 294 NYRTREEINEMR 305 YR + ++ R Sbjct: 783 MYRLIDSLDSTR 794 >gi|219128808|ref|XP_002184596.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404046|gb|EEC43995.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 153 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 5/147 (3%) Query: 175 KYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRAS 230 + R + ++ GD A A QG VYE+ +A + + +V I+VI NNQ T+ + Sbjct: 8 RRRYRSVLPILLHGDAAFAGQGVVYETMQMAEVPDFDVGGTIHVIINNQIGFTTNPLHSL 67 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + S G +FN P +G D AV ++ AV + +IIEM+ YR G + Sbjct: 68 SMPYSSTLGKAFNCPIFHCNGDDPLAVSTALETAVEWRHEWGMDVIIEMVCYRRNGPNKL 127 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKR 317 D + T+ ++ + S H P + ++ Sbjct: 128 DQPAF-TQPKLYKEISQHPPTLDIFEK 153 >gi|190575094|ref|YP_001972939.1| putative oxidoreductase/transketolase [Stenotrophomonas maltophilia K279a] gi|190013016|emb|CAQ46648.1| putative oxidoreductase/transketolase [Stenotrophomonas maltophilia K279a] Length = 759 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 25/176 (14%) Query: 165 SLGTGIAFANKYR-------RSDKICVVCFGDGAANQGQVYESFNIAALWNL------NV 211 +LGT +A + R +D I + FGD +AN +FN A +W+ + Sbjct: 176 ALGTALAIESGKRLGQALPIPTDSIVLCSFGDASANHATAQTAFNTA-MWSAYQKLPAPI 234 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYC 268 ++V E+N + FS + PG+ DG+D+ A + AV +C Sbjct: 235 LFVCEDNGLGISVKTPDGWIAERFSHQ------PGLDYFFADGLDLATGHAQVQAAVEHC 288 Query: 269 RAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 R + P + + T R GH+ +D +R E+ + DP+ + + L + W Sbjct: 289 RRTRRPTFLHLRTTRLMGHAGTDFEVEWRALPELCAAEA-QDPLLRSAQIALESGW 343 >gi|315925761|ref|ZP_07921968.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoramibacter alactolyticus ATCC 23263] gi|315620870|gb|EFV00844.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoramibacter alactolyticus ATCC 23263] Length = 609 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 33/166 (19%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GHG G VS G G+A A + SD V GDG++ G YE+ N A Sbjct: 121 SPTDCFDTGHG--GNSVSAGLGMACACELAGSDDAVVAVIGDGSSTSGMFYEALNCAGRL 178 Query: 208 NLNVIYVIENNQYAMGTSVS---------RASAQTN-----------FSKRGVSFNIPGM 247 N I ++ +N+ ++ ++S RA+AQT F+ G+++ P Sbjct: 179 KRNFIIILNDNEMSISRNISGLAHYLSSLRAAAQTEAESTVASLRAGFAHFGITYFGP-- 236 Query: 248 QVDGMDIRAVKATMDKA--VAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +DG ++ + T+ A + +C +II LT + RG+ ++ Sbjct: 237 -IDGHNVPQLVKTLQTARRIDHC------VIIHTLTQKGRGYPPAE 275 >gi|229006485|ref|ZP_04164136.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus mycoides Rock1-4] gi|228754769|gb|EEM04163.1| 2-oxoisovalerate dehydrogenase subunit alpha [Bacillus mycoides Rock1-4] Length = 158 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 6/144 (4%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQM 105 + EQ + YR MLL R+ +E+ L G + F C GQEA VG +L E D Sbjct: 16 LSDEQVVEMYRTMLLARKIDERMWLLNRAGKIP-FVISCQGQEAAQVGAAFALDREKDYA 74 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGGHGIVGAQ 163 + YR+ G +LA G+ A ++M + G + G G M H KN G V Q Sbjct: 75 LPYYRDMGVVLAFGMTAKELMLSGFAKAGDPNSG-GRQMPGHFGQKKNRIVTGSSPVTTQ 133 Query: 164 VSLGTGIAFANKYRRSDKICVVCF 187 V GIA A K + ++ VC+ Sbjct: 134 VPHAVGIALARKDGK-ERFSNVCY 156 >gi|221632502|ref|YP_002521723.1| transketolase [Thermomicrobium roseum DSM 5159] gi|221155778|gb|ACM04905.1| transketolase [Thermomicrobium roseum DSM 5159] Length = 280 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G A A + D V GDG +GQV+E+ AA W + N++ +++ Sbjct: 126 GSLGQGLSIGLGHALAARLDGRDYHVFVLLGDGEIEEGQVWEAAMAAAHWRVSNLVAIVD 185 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N Y V+ + ++ + +F +V+G D+ AV + A AY GP+ Sbjct: 186 HNGYQQTGPVAAVTDPREYAMKWRAFGWHVEEVNGHDLEAVHEVLRFARAY---RDGPVC 242 Query: 277 IEMLTYRYRGHSM 289 I T + +G S Sbjct: 243 IIAHTVKGKGVSF 255 >gi|329116612|ref|ZP_08245329.1| Transketolase, thiamine pyrophosphate binding domain protein [Streptococcus parauberis NCFD 2020] gi|326907017|gb|EGE53931.1| Transketolase, thiamine pyrophosphate binding domain protein [Streptococcus parauberis NCFD 2020] Length = 284 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 5/164 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV-IE 216 G +G VS+ TGIA+A +SD GDG N+GQ +E+F AA L+ ++V ++ Sbjct: 120 GSLGQGVSVATGIAYAQVIEKSDHFTYTIVGDGELNEGQCWEAFQFAAHQKLSNLFVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + ++ ++ +F ++VDG I A+ + A+ + K P Sbjct: 180 DNKKQLDGLTEEICQPGDYVQKFEAFGFEAVRVDGSSILAIYDAI-LALKLSNSSK-PKC 237 Query: 277 IEMLTYRYRGHSMSD--PANYRTREEINEMRSNHDPIEQVRKRL 318 I + T + +G S+ + +N+ R + ++ + +RK L Sbjct: 238 IVLDTIKGQGVSLIENMTSNHHLRPDQAQLSALSSAANDLRKEL 281 >gi|302776648|ref|XP_002971476.1| hypothetical protein SELMODRAFT_95372 [Selaginella moellendorffii] gi|300160608|gb|EFJ27225.1| hypothetical protein SELMODRAFT_95372 [Selaginella moellendorffii] Length = 971 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 7/188 (3%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++ R + V+ GDG+ + QG VYE+ +++ L N I+++ NNQ A T Sbjct: 337 YSQDVERKRNMAVLLHGDGSFSGQGVVYETLHLSDLPNYTTGGTIHIVVNNQVAFTTDPK 396 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + N P V+G D+ AV A + K ++++++ YR GH Sbjct: 397 SSRSSPYCTDVAKALNAPIFHVNGDDVEAVVHACAMAAEWRCHFKADVVVDIVCYRRFGH 456 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D N+ + ++ + ++ K+L + D+ + V I+N EF Sbjct: 457 NEIDEPNFTQPKMYQVIKGHPTSLDIYEKKLAQVGQLKKEDIARVHDKVMAILNE--EF- 513 Query: 348 QSDKEPDP 355 QS K+ P Sbjct: 514 QSSKDYIP 521 >gi|300024731|ref|YP_003757342.1| 2-oxoglutarate dehydrogenase, E1 subunit [Hyphomicrobium denitrificans ATCC 51888] gi|299526552|gb|ADJ25021.1| 2-oxoglutarate dehydrogenase, E1 subunit [Hyphomicrobium denitrificans ATCC 51888] Length = 986 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 6/177 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E F ++ L I+ I NNQ T+ + + Sbjct: 386 RTPVLPLLIHGDAAFAGQGVVAECFGLSGLRGHRTAGSIHFIINNQIGFTTAPHHSRSSP 445 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G + AV A + + + P++I+M YR GH+ +D Sbjct: 446 YCSDVALMIEAPIFHVNGDNPEAVVHVAKIATEFRQRFQKPVVIDMFCYRRHGHNETDEP 505 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 + ++++ +E + L+ + + + EI+ +VR ++N EFA SD Sbjct: 506 MFTQPAMYKRIKAHPTAVEIYSQSLIDEEVITVAEFDEIKASVRSNLDN--EFAVSD 560 >gi|227540559|ref|ZP_03970608.1| oxoglutarate dehydrogenase [Sphingobacterium spiritivorum ATCC 33300] gi|227239641|gb|EEI89656.1| oxoglutarate dehydrogenase [Sphingobacterium spiritivorum ATCC 33300] Length = 916 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 12/191 (6%) Query: 179 SDKIC-VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 S KI ++ GD A A QG VYE ++ L I+++ NNQ T+ A + T Sbjct: 327 SSKIAPIMIHGDAAVAGQGIVYEVIQMSKLDGYKTGGTIHIVINNQVGFTTNFKDARSST 386 Query: 234 ---NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + +K +S P V+G D+ A+ ++ AV Y + +K + I++L YR GH+ + Sbjct: 387 YCTDIAKVTLS---PVFHVNGDDVEALVYAINLAVEYRQKYKTDVFIDLLCYRRFGHNEA 443 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA-QS 349 D + + + +P E ++LL KE+E R ++ + ++ A +S Sbjct: 444 DEPKFTQPLLYKAIEKHANPREIYAQKLLDQGSVDANLAKEMEKEFRSLLQSRLDEAKES 503 Query: 350 DKEPDPAELYS 360 K D ++S Sbjct: 504 QKLNDETPMFS 514 >gi|300771339|ref|ZP_07081215.1| 2-oxoglutarate dehydrogenase E1 component [Sphingobacterium spiritivorum ATCC 33861] gi|300762009|gb|EFK58829.1| 2-oxoglutarate dehydrogenase E1 component [Sphingobacterium spiritivorum ATCC 33861] Length = 914 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 12/191 (6%) Query: 179 SDKIC-VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 S KI ++ GD A A QG VYE ++ L I+++ NNQ T+ A + T Sbjct: 327 SSKIAPIMIHGDAAVAGQGIVYEVIQMSKLDGYKTGGTIHIVINNQVGFTTNFKDARSST 386 Query: 234 ---NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + +K +S P V+G D+ A+ ++ AV Y + +K + I++L YR GH+ + Sbjct: 387 YCTDIAKVTLS---PVFHVNGDDVEALVYAINLAVEYRQKYKTDVFIDLLCYRRFGHNEA 443 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA-QS 349 D + + + +P E ++LL KE+E R ++ + ++ A +S Sbjct: 444 DEPKFTQPLLYKAIEKHANPREIYAQKLLDQGSVDANLAKEMEKEFRSLLQSRLDEAKES 503 Query: 350 DKEPDPAELYS 360 K D ++S Sbjct: 504 QKLNDETPMFS 514 >gi|302765184|ref|XP_002966013.1| hypothetical protein SELMODRAFT_83943 [Selaginella moellendorffii] gi|300166827|gb|EFJ33433.1| hypothetical protein SELMODRAFT_83943 [Selaginella moellendorffii] Length = 971 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 7/188 (3%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++ R + V+ GDG+ + QG VYE+ +++ L N I+++ NNQ A T Sbjct: 337 YSQDVERKRNMAVLLHGDGSFSGQGVVYETLHLSDLPNYTTGGTIHIVVNNQVAFTTDPK 396 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + N P V+G D+ AV A + K ++++++ YR GH Sbjct: 397 SSRSSPYCTDVAKALNAPIFHVNGDDVEAVVHACAMAAEWRCHFKADVVVDIVCYRRFGH 456 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D N+ + ++ + ++ K+L + D+ + V I+N EF Sbjct: 457 NEIDEPNFTQPKMYQVIKGHPTSLDIYEKKLAQVGQLKKEDIARVHDKVMAILNE--EF- 513 Query: 348 QSDKEPDP 355 QS K+ P Sbjct: 514 QSSKDYIP 521 >gi|255037381|ref|YP_003088002.1| Transketolase domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254950137|gb|ACT94837.1| Transketolase domain protein [Dyadobacter fermentans DSM 18053] Length = 804 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 45/202 (22%), Positives = 90/202 (44%), Gaps = 24/202 (11%) Query: 160 VGAQVSLGTGIAFANKY--------------RRSDKICVVCFGDGAANQGQVYESFNIAA 205 Q+ G+A+A+K R+ ++ GD + +QG +E+ N A Sbjct: 143 TAGQIPRSVGLAYASKLFRENADLHSMTTFSRKGSEVVFSTIGDASTSQGMFWEAMNAAG 202 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSK--RGVSFNIPG-----MQVDGMDIRAVK 258 + + +I + ++ Y + + + + + SK G+ N G V+G D A+ Sbjct: 203 VLQIPLIVSVWDDGYGISVPIEYQTTKGSISKALAGLQRNEDGDGIEIFTVNGWDYPALV 262 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTY-RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRK 316 T KA R P+++ + + +GHS S Y++++ + R HD + R Sbjct: 263 ETYQKAAKVSREQHVPVLVHVTELTQPQGHSTSGSHERYKSKQRLQWER-EHDCNVRFRD 321 Query: 317 RLLHNKWASEGDLKEIEMNVRK 338 +L N +A++ +L+EIE ++ Sbjct: 322 WILKNGYATDDELEEIEREAKE 343 >gi|83952272|ref|ZP_00961004.1| possible 2-oxoisovalerate dehydrogenase; E1 component, alpha and beta subunit [Roseovarius nubinhibens ISM] gi|83837278|gb|EAP76575.1| possible 2-oxoisovalerate dehydrogenase; E1 component, alpha and beta subunit [Roseovarius nubinhibens ISM] Length = 730 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 15/166 (9%) Query: 160 VGAQVSLGTGIAFANKYR--RSDKICVVCFGDGAANQGQVYESFNIAALWN------LNV 211 +G SLG A +++ D I FGD +AN +FN A W L + Sbjct: 154 LGVAYSLGMARRRAPEHQALPEDSIVYCSFGDASANHSTAQGAFNTAG-WTSYQSVPLPL 212 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 ++V E+N + + +F++R G+ + DG+D+ +A Y R Sbjct: 213 LFVCEDNGIGISVKTPKGWIAASFAQRPGIKY----FHCDGLDMFETYRVAQEAAEYVRT 268 Query: 271 HKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVR 315 + P + + T R GH+ +D P Y + E+ +N + VR Sbjct: 269 RRKPAFLHIRTVRLYGHAGADVPTTYMPKSEVEADEANDPLLHSVR 314 >gi|332671158|ref|YP_004454166.1| 2-oxoglutarate dehydrogenase, E1 subunit [Cellulomonas fimi ATCC 484] gi|332340196|gb|AEE46779.1| 2-oxoglutarate dehydrogenase, E1 subunit [Cellulomonas fimi ATCC 484] Length = 1269 Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 66/232 (28%), Positives = 95/232 (40%), Gaps = 37/232 (15%) Query: 108 AYREHGHILA--CGVDASKIMAELTGRQGGIS-KGKGGSMHMFSTKNGFYGGHGIVGAQV 164 A+R ++LA G ++I +E G Q S +G G + T+ F G QV Sbjct: 587 AHRGRLNVLANIAGKSYAQIFSEFEGNQDPKSVQGSGDVKYHLGTEGAFTAESGAT-TQV 645 Query: 165 SLGT-------------GIAFANKYRRS------DKICVVCFGDGA-ANQGQVYESFNIA 204 L GI A + R + ++ GD A A QG V+E+ N+A Sbjct: 646 YLAANPSHLEAVDPVLEGIVRAKQDRIDLGGDGFSVLPILIHGDAAFAGQGVVFETLNLA 705 Query: 205 ALWNLNV---IYVIENNQ--YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 L I+VI NNQ + G S SR+S +G+ +P V+G D A Sbjct: 706 QLRGYRTGGTIHVIINNQVGFTTGPSSSRSSQYATDVVKGL--QVPVFHVNGDDPEACVR 763 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSDPANYRTREEINEMR 305 + A Y ++I+ML YR RGH SM+ P Y E +R Sbjct: 764 VAELAFEYREQFDRDVVIDMLCYRRRGHNEGDDPSMTQPLMYNLIEAKRSVR 815 >gi|163731454|ref|ZP_02138901.1| pyruvate dehydrogenase E1 component, beta subunit, putative [Roseobacter litoralis Och 149] gi|161394908|gb|EDQ19230.1| pyruvate dehydrogenase E1 component, beta subunit, putative [Roseobacter litoralis Och 149] Length = 729 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 19/155 (12%) Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRASAQT 233 D + + FGD +AN + N AA W+ + ++ V E+N + T Sbjct: 176 DAVVMCSFGDASANHSTAQGAIN-AACWSSYQSVPMPLLLVCEDNGIGISTPTPEGWIAA 234 Query: 234 NFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 NF+ R PG++ +G+D+ A A AY R H+ P + + T R GH+ S Sbjct: 235 NFAHR------PGLRYFACNGLDMTETLAVAGAAAAYVRRHRKPAFLHLRTIRLYGHAGS 288 Query: 291 D-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 D A YR+ + I +N + V RL+H + A Sbjct: 289 DVEATYRSPQAIAADEANDPLLHSV--RLMHERQA 321 >gi|89095249|ref|ZP_01168171.1| 2-oxoglutarate dehydrogenase, E1 component [Oceanospirillum sp. MED92] gi|89080503|gb|EAR59753.1| 2-oxoglutarate dehydrogenase, E1 component [Oceanospirillum sp. MED92] Length = 944 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 65/237 (27%), Positives = 99/237 (41%), Gaps = 27/237 (11%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG +H+ F H + A V G+ A + RR D + V GD A Q Sbjct: 315 GGEVHI---AMAFNPSHLEIAAPVVEGS--VRARQDRREDAAGDSVVPVNIHGDQAFCGQ 369 Query: 195 GQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS-FNIPGMQVD 250 G V E+F ++ A I+++ NNQ TS S T +S P V+ Sbjct: 370 GVVMETFQMSQTRAYKTGGTIHLVINNQVGFTTSKQEDSRSTEYSTDVAKMIQAPIFHVN 429 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD------PANYRTREEINEM 304 G D AV+ AV Y K ++I++ YR RGH+ +D P Y +I + Sbjct: 430 GDDPEAVRFVTQLAVDYRNEFKKDVVIDLFCYRRRGHNEADEPSGTQPLMY---AQIKKQ 486 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 ++ D Q +L+ + + KE+E RK++ N +S AEL+ D Sbjct: 487 KTTRDLYAQ---QLIAEGVITAEESKEMEKEYRKLLENGEHVVKSLVHEPNAELFVD 540 >gi|254773763|ref|ZP_05215279.1| dehydrogenase E1 component superfamily protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 297 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 75/314 (23%), Positives = 125/314 (39%), Gaps = 57/314 (18%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD--QMIT 107 + L YR M ++R + + V + GQEAV VG +L GD T Sbjct: 7 DDRLEPYRRMWVLRLLDMALDESAVGAAVDDDAPVDFGQEAVAVGAVAALRPGDLVNATT 66 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 H + G+ +AEL G G G GGS K+G + + +LG Sbjct: 67 PRFRHAQQIGLGLPLGPAIAELLGTTRG---GAGGS-----RKSGAADWKQALANESALG 118 Query: 168 TGIAFA----NKYRRSDK----ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 FA N R + +C + D + + + IAA W L V++V++N + Sbjct: 119 QSTLFALGDANAQRMAGDGRVTLCAIAGSD--THSVEFATAAKIAASWRLPVVFVVQNVR 176 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 G R + ++ +P VDG D+ AV ++ +AV + A GP ++E Sbjct: 177 G--GPDARRCAYRSE--------TMPMALVDGRDVVAVGDSVGQAVRHASAGDGPSLVEA 226 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNH----DPIEQVRKRLLHNKWASEGDLKEIEMN 335 +TY R+NH DP+ R++L+ + L E+E Sbjct: 227 ITY----------------------RTNHPVAIDPLVLARRQLMADG-VDPDRLVEVERG 263 Query: 336 VRKIINNSVEFAQS 349 R ++ ++ A++ Sbjct: 264 ARHLVAEAMACAKA 277 >gi|134102819|ref|YP_001108480.1| alpha-ketoglutarate decarboxylase [Saccharopolyspora erythraea NRRL 2338] gi|291005881|ref|ZP_06563854.1| alpha-ketoglutarate decarboxylase [Saccharopolyspora erythraea NRRL 2338] gi|133915442|emb|CAM05555.1| 2-oxoglutarate dehydrogenase E1 component [Saccharopolyspora erythraea NRRL 2338] Length = 1206 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 12/185 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N++ L ++VI NNQ T+ + + + Sbjct: 627 LPVLLHGDAAFAGQGVVAETLNLSLLRGYRTGGTVHVIVNNQVGYTTAPEHSRSSKYSTD 686 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV Y +A ++I+M+ YR RGH SM+ Sbjct: 687 VAKMIGAPVFHVNGDDPEACVWVAKLAVEYRQAFGKDVVIDMVCYRRRGHNEGDDPSMTQ 746 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 PA Y +++ +R + E + R +E LK+ + + N E + Sbjct: 747 PAMYDAIDKMRSVRKTY--TEALIGRGDITVEEAEKALKDYASQLEHVFNEVRELEKHPP 804 Query: 352 EPDPA 356 EP P+ Sbjct: 805 EPSPS 809 >gi|219125144|ref|XP_002182847.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405641|gb|EEC45583.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 153 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 5/140 (3%) Query: 175 KYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRAS 230 + R + + ++ GD A A QG VYE+ +A + + +V I+VI NNQ T+ + Sbjct: 8 RRRYRNVLPILLHGDAAFAGQGVVYETMQMAEVPDFDVGGTIHVIINNQIGFTTNPLHSL 67 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + S+ G +F+ P +G D AV ++ AV + +IIEM+ YR G + Sbjct: 68 SMPYASELGKAFSCPIFHCNGDDPLAVSTVLETAVEWRHEWGMDVIIEMVCYRRNGPNKL 127 Query: 291 DPANYRTREEINEMRSNHDP 310 D + T+ ++ + S H P Sbjct: 128 DQPAF-TQPKLYKEISQHPP 146 >gi|163750080|ref|ZP_02157323.1| 2-oxoisovalerate dehydrogenase [Shewanella benthica KT99] gi|161330137|gb|EDQ01119.1| 2-oxoisovalerate dehydrogenase [Shewanella benthica KT99] Length = 747 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 18/151 (11%) Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALW------NLNVIYVIENNQYAMGTSVSRASAQ 232 +D + + FGD +AN + N +A W + ++++ E+N + T + Sbjct: 179 TDSLVLCNFGDASANHASALSAIN-SACWAAYQQVPMPLVFICEDNGIGISTPTPKGWIS 237 Query: 233 TNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 NFS+R PG++ DG DI A + R H+ P+ + + T R GH+ Sbjct: 238 ANFSQR------PGLKYFSCDGRDILDCYKISKAAADFARMHRKPVFLHVRTVRLMGHAG 291 Query: 290 SDPA-NYRTREEINEMRSNHDPIEQVRKRLL 319 SD Y +++I + S DP+ ++L+ Sbjct: 292 SDAEIAYMKKQQIFDNES-QDPLLVTAQQLI 321 >gi|328864878|gb|EGG13264.1| 2-oxoglutarate dehydrogenase [Dictyostelium fasciculatum] Length = 1056 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 10/179 (5%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++ RS + +V GD + A QG VYE+ +++ L + + ++++ NNQ T+ S Sbjct: 431 YSGDQERSKALAIVLHGDASMAGQGVVYETLHLSNLTHYSTGGTVHIVVNNQIGFTTNPS 490 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + G + +IP V+G D +V A + + K +I++++ YR GH Sbjct: 491 SSRSSQYCTDVGKAIDIPIFHVNGDDTESVVHVCKLAAEWRQKFKRDVIVDIVCYRRFGH 550 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN-VRKIINNSVE 345 + +D + N++ IE+ ++L+ EG L + N V+ +I + E Sbjct: 551 NETDQPKFTQPLMYNKISQQVPVIEKYSQQLI-----GEGILTGDQFNQVKAVIREAYE 604 >gi|219130374|ref|XP_002185342.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403257|gb|EEC43211.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 153 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 5/147 (3%) Query: 175 KYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRAS 230 + R + + ++ GD A A QG VYE+ +A + + +V I+VI NNQ + + + Sbjct: 8 RRRYRNVLPILLHGDAAFAGQGVVYETMQMADVPDFDVGGTIHVIINNQIGLTINPLHSL 67 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + S G +FN P +G D AV ++ AV + +IIEM+ YR G + Sbjct: 68 STPYSSDLGKAFNCPIFHCNGDDPLAVSTALETAVEWRHEWGMDVIIEMVCYRRNGPNKL 127 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKR 317 D + T+ ++ + S H P + ++ Sbjct: 128 DQPAF-TQPKLYKELSRHPPTLDIFEK 153 >gi|294139584|ref|YP_003555562.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and subunit beta [Shewanella violacea DSS12] gi|293326053|dbj|BAJ00784.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit, putative [Shewanella violacea DSS12] Length = 742 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 25/174 (14%) Query: 160 VGAQVS--LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW------NLNV 211 VGA +S L ++ A K +D + + FGD +AN + N +A W + + Sbjct: 152 VGAALSIPLTERLSLAAKMP-ADSVVLCNFGDASANHASALSAIN-SACWAAYQQVPMPL 209 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYC 268 +++ E+N + T + NFS+R PG++ DG DI A + Sbjct: 210 VFICEDNGIGISTPTPKGWISANFSQR------PGLKYFYCDGRDILDCYKVSKAAADFA 263 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPA-NYRTREEI--NEMRSNHDPIEQVRKRLL 319 R H+ P+ + + T R GH+ SD Y +++I NE + DP+ ++L+ Sbjct: 264 RMHRKPVFLHVRTVRLMGHAGSDAEIAYMKKQQIFYNE---SQDPLLVTAQQLI 314 >gi|227542553|ref|ZP_03972602.1| alpha-ketoglutarate decarboxylase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181751|gb|EEI62723.1| alpha-ketoglutarate decarboxylase [Corynebacterium glucuronolyticum ATCC 51866] Length = 1261 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 5/142 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 I + GD A A G V E+ N+A L V ++++ NNQ T+ + + Sbjct: 671 IPIQLHGDAAFAGLGVVQETLNLAQLRGYTVGGTVHIVVNNQIGFTTTPDSGRSSHYATD 730 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +G +++ P ++G D AV A Y R + I+M+ YR RGH+ +D + T Sbjct: 731 QGKAYDCPVFHLNGDDPEAVVWVGQLATEYRRRFGKDVFIDMICYRRRGHNEADDPSM-T 789 Query: 298 REEINEMRSNHDPIEQVRKRLL 319 + + E+ NH+ + R L Sbjct: 790 QPRLYELIDNHESVRTTYTRDL 811 >gi|148652078|ref|YP_001279171.1| 2-oxoglutarate dehydrogenase E1 component [Psychrobacter sp. PRwf-1] gi|148571162|gb|ABQ93221.1| 2-oxoglutarate dehydrogenase E1 component [Psychrobacter sp. PRwf-1] Length = 958 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 22/209 (10%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQ 219 G A + RR+DK + +V GD A A QG V E+F ++ A ++++ NNQ Sbjct: 340 GSVRARQVRRNDKDGNLVLPLVVHGDAAIAAQGVVQETFQMSQTRAYTTGGTVHIVINNQ 399 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS + T + + + P + V+G D AV A+ Y I+I+ Sbjct: 400 VGFTTSRQEDARSTEYCTDIAKMVHAPILHVNGDDPEAVVFAAQMALDYRHEFHKDIVID 459 Query: 279 MLTYRYRGHSMSD------PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 + YR GH+ +D P Y +++ R+ Q ++L+ SEGD K + Sbjct: 460 LFCYRRNGHNEADEPSATQPLMYSIIKKLPTTRT------QYAQKLMSQGVISEGDDKTL 513 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSD 361 E R+ ++ A S + ELY D Sbjct: 514 EDEYREALDKGEYVANSLVQQPNEELYVD 542 >gi|147679085|ref|YP_001213300.1| transketolase, N-terminal subunit [Pelotomaculum thermopropionicum SI] gi|146275182|dbj|BAF60931.1| transketolase, N-terminal subunit [Pelotomaculum thermopropionicum SI] Length = 292 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + D V GDG +GQV+E+ AA + L NV ++ Sbjct: 135 GSLGQGLSAANGMALAAKIDKKDYRVYVLLGDGEVQEGQVWEAAMSAAHYKLDNVTAFLD 194 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + + V + +++ +F + +DG D + + A +D+A RA KG P+ Sbjct: 195 HNGFQIDGPVREVMSPEPLAEKWRAFGWHVISIDGHDFKQILAALDEA----RAVKGKPV 250 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 251 MIVAETVKGKGVSF 264 >gi|295099360|emb|CBK88449.1| Transketolase, N-terminal subunit [Eubacterium cylindroides T2-87] Length = 271 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A ANK ++D GDG +GQV+E+ AA L N+ +I+ Sbjct: 115 GSLGQGISCAVGMALANKLDKNDHRIYTLCGDGECQEGQVWEAIMAAAHHKLDNLCIIID 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + V + +++ +FN +++DG D ++A +A R KG P Sbjct: 175 NNNLQIDGKVEDVMSIYPLNEKMKAFNCHVIEIDGHDFDQIRAAFKEA----RETKGQPT 230 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 231 VIIAKTIKGKGVSF 244 >gi|110680127|ref|YP_683134.1| pyruvate dehydrogenase E1 component, beta subunit, putative [Roseobacter denitrificans OCh 114] gi|109456243|gb|ABG32448.1| pyruvate dehydrogenase E1 component, beta subunit, putative [Roseobacter denitrificans OCh 114] Length = 729 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 19/155 (12%) Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRASAQT 233 D + + FGD +AN + N AA W+ + ++ V E+N + T Sbjct: 176 DAVVMCSFGDASANHSTAQGAIN-AACWSSYQSVPMPLLLVCEDNGIGISTPTPEGWIAA 234 Query: 234 NFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 NF+ R PG++ +G+D+ A A AY R H+ P + + T R GH+ S Sbjct: 235 NFAHR------PGLRYFACNGLDMTETLAVAGAAAAYVRRHRKPAFLHLRTVRLYGHAGS 288 Query: 291 D-PANYRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 D A YR+ + I +N + V RL+H + A Sbjct: 289 DVEATYRSPQAIAADEANDPLLHSV--RLMHERAA 321 >gi|315042810|ref|XP_003170781.1| 2-oxoglutarate dehydrogenase E1 component [Arthroderma gypseum CBS 118893] gi|311344570|gb|EFR03773.1| 2-oxoglutarate dehydrogenase E1 component [Arthroderma gypseum CBS 118893] Length = 1051 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 4/166 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ AL + I+++ NNQ T A + S Sbjct: 430 VLLHGDAAFAAQGIVYETMGFHALPAYSTGGTIHIVVNNQIGFTTDPRFARSTPYCSDIA 489 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+++ YR +GH+ +D + Sbjct: 490 KAIDAPVFHVNGDDVEALNHVCQLAADWRAQFKSDVVIDIVCYRKQGHNETDQPAFTQPL 549 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + S I++ +LL K ++ D+ E + V ++N+S E Sbjct: 550 MYKRIASQQSQIDKYVDKLLKEKTFTKEDIDEHKKWVWGMLNDSFE 595 >gi|194366413|ref|YP_002029023.1| transketolase domain-containing protein [Stenotrophomonas maltophilia R551-3] gi|194349217|gb|ACF52340.1| Transketolase domain protein [Stenotrophomonas maltophilia R551-3] Length = 759 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 25/176 (14%) Query: 165 SLGTGIAFANKYR-------RSDKICVVCFGDGAANQGQVYESFNIAALWNL------NV 211 +LGT +A + R +D I + FGD ++N +FN A +W+ + Sbjct: 176 ALGTALAIESGKRLGQPLPIPADSIVLCSFGDASSNHATAQTAFNTA-MWSAYQKLPAPI 234 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYC 268 ++V E+N + FS + PG+ DG+D+ A + AV +C Sbjct: 235 LFVCEDNGLGISVKTPEGWIAERFSHQ------PGLDYFFADGLDLAVGHAQVQAAVEHC 288 Query: 269 RAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 R + P + + T R GH+ +D +R E+ + DP+ + + L + W Sbjct: 289 RRTRRPTFLHLRTTRLMGHAGTDFEVEWRALPELCAAEA-QDPLLRSAQIALESGW 343 >gi|326800612|ref|YP_004318431.1| transketolase domain-containing protein [Sphingobacterium sp. 21] gi|326551376|gb|ADZ79761.1| Transketolase domain-containing protein [Sphingobacterium sp. 21] Length = 805 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 72/354 (20%), Positives = 144/354 (40%), Gaps = 50/354 (14%) Query: 28 TSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIG 87 T +D + F E F+ + N + + R L+ R E G+ G+ G G Sbjct: 9 TDPIDTSKLSF-EDFKATVLNDYRIICESREASLLGRKEVLTGKA-KFGIFGD------G 60 Query: 88 QEAVIVGMKMSLTEGDQMITAYREHGHILACGV-DASKIMAELTGRQGGISKGKGGSMHM 146 +E + M EGD YR+ A G+ + + +++ ++ G M Sbjct: 61 KEVAQIAMAKVFKEGDWRSGYYRDQTFAFATGISNVYEFFSQMYAHPDIEAEPASGGRMM 120 Query: 147 ---FSTKNGFYGGHGI--------------VGAQVSLGTGIAFANKYRRSDK-------- 181 F+T+ G + G Q+ G+A A+K R +K Sbjct: 121 NGHFATRELNADGSWVNQTQLKNSSADVSTTGGQIPRLLGLAQASKVYRENKELAYLTHF 180 Query: 182 ------ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + G+ + ++G +E+FN A + + + + ++ Y + + + + Sbjct: 181 SNNGNEVAFGTIGNASTSEGVFFEAFNAAGVLQIPLAISVWDDGYGISVPNKYQTTKEDI 240 Query: 236 SK--RGVSFNIPG-----MQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY-RYRGH 287 S+ RG + G +V G D + T ++A+ CR P+ I ++ + +GH Sbjct: 241 SEVLRGFQRDEKGEGYEIFKVRGWDYPGLCETYERAIRMCREEHVPVFIHVIEMTQPQGH 300 Query: 288 SMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 S S Y++++ ++ S +D + Q+RK +L + A+E +L IE ++ + Sbjct: 301 STSGSHERYKSKDRLD-WESEYDCLVQMRKWMLESAIATEDELVIIEQQAKEFV 353 >gi|227487913|ref|ZP_03918229.1| alpha-ketoglutarate decarboxylase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092119|gb|EEI27431.1| alpha-ketoglutarate decarboxylase [Corynebacterium glucuronolyticum ATCC 51867] Length = 1261 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 5/142 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 I + GD A A G V E+ N+A L V ++++ NNQ T+ + + Sbjct: 671 IPIQLHGDAAFAGLGVVQETLNLAQLRGYTVGGTVHIVVNNQIGFTTTPDSGRSSHYATD 730 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +G +++ P ++G D AV A Y R + I+M+ YR RGH+ +D + T Sbjct: 731 QGKAYDCPVFHLNGDDPEAVVWVGQLATEYRRRFGKDVFIDMICYRRRGHNEADDPSM-T 789 Query: 298 REEINEMRSNHDPIEQVRKRLL 319 + + E+ NH+ + R L Sbjct: 790 QPRLYELIDNHESVRTTYTRNL 811 >gi|126434544|ref|YP_001070235.1| branched-chain alpha-keto acid dehydrogenase E1 component [Mycobacterium sp. JLS] gi|126234344|gb|ABN97744.1| branched-chain alpha-keto acid dehydrogenase E1 component [Mycobacterium sp. JLS] Length = 721 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 15/175 (8%) Query: 180 DKICVVCFGDGAANQGQVYESFNIAAL-----WNLNVIYVIENNQYAMGTSVSRASAQTN 234 D + V FGD + N + N A + +++V E+N + T R Sbjct: 177 DAVTVCSFGDASVNHSTAVGALNTAMHTAYQGMPMPLLFVCEDNGIGISTRTPRGWVART 236 Query: 235 FSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-- 291 +S+R G+ + DG D+ A T A + R H+ P + + T R GH+ SD Sbjct: 237 YSQREGLQY----FAADGTDLAATIETTRAAAEFVRTHRRPAFLHLSTVRLMGHAGSDYE 292 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD-LKEIEMNVRKIINNSVE 345 P R E + + + DP+ K L+ S + L+ E R++++ + E Sbjct: 293 PGYRRPDEIVADF--DRDPVLCAAKALVAQGILSPVEVLERYEATRRQVLDMAAE 345 >gi|163745796|ref|ZP_02153155.1| dehydrogenase/transketolase family protein [Oceanibulbus indolifex HEL-45] gi|161380541|gb|EDQ04951.1| dehydrogenase/transketolase family protein [Oceanibulbus indolifex HEL-45] Length = 724 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 26/209 (12%) Query: 134 GGISKGKGGSMHMFSTKNGFYGGH--GIVGAQVSLGTGIAFANKYRRS----DKICVVCF 187 GG K G M + H VGA S+G +A N+ + D I + F Sbjct: 126 GGRHKVLGSRPLMIPPQTSTIASHLPKAVGAAHSIG--MARRNRPEHAILPRDAIAMCSF 183 Query: 188 GDGAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 GD +AN + N AA W L +++V E+N + T + + S R Sbjct: 184 GDASANHSTAQGAIN-AACWTAVQGVPLPLLFVCEDNGIGISTKTPTGWIKASMSAR--- 239 Query: 242 FNIPGMQV---DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRT 297 PG++ DG+D+ A A +A Y R H+ P + + T R GH+ +D A +Y Sbjct: 240 ---PGLKYFEGDGLDLHAAFAAAKEAADYVRVHRKPAFLHLRTVRLYGHAGADVATSYLP 296 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASE 326 R E+ +N DP+ + L+ ++E Sbjct: 297 RAEVEADEAN-DPLLHSARLLVEAGGSAE 324 >gi|166154275|ref|YP_001654393.1| alpha-ketoglutarate decarboxylase [Chlamydia trachomatis 434/Bu] gi|166155150|ref|YP_001653405.1| alpha-ketoglutarate decarboxylase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335526|ref|ZP_07223770.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis L2tet1] gi|165930263|emb|CAP03749.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis 434/Bu] gi|165931138|emb|CAP06703.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 903 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 11/179 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + V+ GD A A QG VYE+F ++ + + ++++ NNQ T+ R S T + + Sbjct: 318 LAVLMHGDAALAGQGVVYETFQLSGIPGYSTEGTVHIVVNNQIGF-TAQPRESRSTPYCT 376 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 IP +V+G D+ A M+ A+ +II++ YR GH+ SD + Sbjct: 377 DIAKMMGIPVFRVNGEDVLACLQVMEYAIHIRERFHCDVIIDLCCYRKYGHNESDDPSVT 436 Query: 297 TREEINEMRSNHDPIEQVRKRLLHN-KW-ASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 E++ E ++ LLH+ +W S +L+ I+ + ++N E+A S K+P Sbjct: 437 APFLYEEIKKKKQGSELFKEILLHHPEWNISSNELERIDTEIAHVLNQ--EYA-SLKDP 492 >gi|114776482|ref|ZP_01451527.1| 2-oxoglutarate dehydrogenase, E1 component [Mariprofundus ferrooxydans PV-1] gi|114553312|gb|EAU55710.1| 2-oxoglutarate dehydrogenase, E1 component [Mariprofundus ferrooxydans PV-1] Length = 940 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 16/192 (8%) Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA- 191 + GG +H+ GF H + V LG+ A + RR DK + V+ GD A Sbjct: 307 RTPGGVVHL---SLGFNPSHLEIITPVVLGS--VRARQCRRGDKARREVMGVLVHGDAAF 361 Query: 192 ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ 248 A QG V ES ++ L + I+++ NNQ + A + T + + P + Sbjct: 362 AGQGVVAESLELSKLNGFRIGGTIHIVVNNQIGFTVNPHDARSTTYCTDIAKIIHAPILH 421 Query: 249 VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNH 308 V+G D A ++ AV Y I+I+++ YR GH+ +D T+ + + H Sbjct: 422 VNGDDPEACCQAVEIAVDYRNTFHEDIVIDLICYRRHGHNETDSPEV-TQPLMYRRIAEH 480 Query: 309 DPIEQV-RKRLL 319 +EQV R RL+ Sbjct: 481 PTVEQVYRDRLI 492 >gi|313675831|ref|YP_004053827.1| 2-oxoglutarate dehydrogenase, e1 subunit [Marivirga tractuosa DSM 4126] gi|312942529|gb|ADR21719.1| 2-oxoglutarate dehydrogenase, E1 subunit [Marivirga tractuosa DSM 4126] Length = 910 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 4/167 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L + ++++ NNQ T A + + Sbjct: 326 LPILIHGDAAVAGQGIVYETTQMSLLEGYSTGGTVHLVINNQVGFTTDYDDARSSIYCTD 385 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P + V+G D AV + AV Y I I++L YR GH+ SD + Sbjct: 386 IAKMIDAPVLHVNGDDAEAVNFAANLAVEYRNKFHKDIFIDLLCYRRHGHNESDEPKFTQ 445 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 + N++ + +P E K+L +K++E + +K + + + Sbjct: 446 PKLYNKIAKHPNPREVYVKKLTERGDLDNDSVKKLEKDFKKQLQDRL 492 >gi|52842787|ref|YP_096586.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629898|gb|AAU28639.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 756 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 12/168 (7%) Query: 180 DKICVVCFGDGAANQGQVYESFNIAAL-----WNLNVIYVIENNQYAMGTSVSRASAQTN 234 D + + FGD + N + N + + L ++++ E+N + + +++ Sbjct: 191 DSVILCSFGDASTNHATSQATLNACSWITQQNYPLPIVFICEDNGIGISVPTPSSWIKSS 250 Query: 235 FSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-P 292 S R G+ + ++ DG++I V A +A R K P+ + M R GH+ SD Sbjct: 251 VSSRPGIHY----IECDGLNIADVFAKAQEADYLARVKKQPVFLHMRCVRLLGHAGSDIE 306 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 + Y T+EEI E R +DP+ L W S + E+ + R +I Sbjct: 307 SQYNTQEEI-EQREANDPLLHTAGILYREGWMSLQAMVELYQDNRALI 353 >gi|54295417|ref|YP_127832.1| hypothetical protein lpl2503 [Legionella pneumophila str. Lens] gi|53755249|emb|CAH16743.1| hypothetical protein lpl2503 [Legionella pneumophila str. Lens] Length = 745 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 12/168 (7%) Query: 180 DKICVVCFGDGAANQGQVYESFNIAAL-----WNLNVIYVIENNQYAMGTSVSRASAQTN 234 D + + FGD + N + N + + L ++++ E+N + + +++ Sbjct: 180 DSVILCSFGDASTNHATSQATLNACSWITQQNYPLPIVFICEDNGIGISVPTPSSWIKSS 239 Query: 235 FSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-P 292 S R G+ + ++ DG++I V A +A R K P+ + M R GH+ SD Sbjct: 240 VSSRPGIHY----IECDGLNIADVFAKAQEADYLARVKKQPVFLHMRCVRLLGHAGSDIE 295 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 + Y T+EEI E R +DP+ L W S + E+ + R +I Sbjct: 296 SQYNTQEEI-EQREANDPLLHTAGILYREGWMSLQAMVELYQDNRALI 342 >gi|222150038|ref|YP_002550995.1| 2-oxoglutarate dehydrogenase E1 component [Agrobacterium vitis S4] gi|221737020|gb|ACM37983.1| oxoglutarate dehydrogenase E1 component [Agrobacterium vitis S4] Length = 998 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++VI NNQ T+ + + Sbjct: 395 RAKVLPLLLHGDAAFAGQGVVAEILGLSGLRGHRVAGTMHVIINNQIGFTTNPGFSRSSP 454 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++++M YR GH+ D Sbjct: 455 YPSDVAKMIEAPIFHVNGDDPEAVVYAAKVATEFRMKFHKPVVVDMFCYRRFGHNEGDEP 514 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ + E+R++ ++ RL+ +EGDL++++ + R + E QS K P Sbjct: 515 SFTQPKMYKEIRAHKTVVQVYGDRLIAEGVITEGDLEKMKADWRANLEQEFEAGQSYK-P 573 Query: 354 DPAE 357 + A+ Sbjct: 574 NKAD 577 >gi|307611460|emb|CBX01129.1| hypothetical protein LPW_28281 [Legionella pneumophila 130b] Length = 745 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 12/168 (7%) Query: 180 DKICVVCFGDGAANQGQVYESFNIAAL-----WNLNVIYVIENNQYAMGTSVSRASAQTN 234 D + + FGD + N + N + + L ++++ E+N + + +++ Sbjct: 180 DSVILCSFGDASTNHATSQATLNACSWITQQNYPLPIVFICEDNGIGISVPTPSSWIKSS 239 Query: 235 FSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-P 292 S R G+ + ++ DG++I V A +A R K P+ + M R GH+ SD Sbjct: 240 VSSRPGIHY----IECDGLNIADVFAKAQEADYLARVKKQPVFLHMRCVRLLGHAGSDIE 295 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 + Y T+EEI E R +DP+ L W S + E+ + R +I Sbjct: 296 SQYNTQEEI-EQREANDPLLHTAGILYREGWMSLQAMVELYQDNRALI 342 >gi|271967681|ref|YP_003341877.1| 2-oxoisovalerate dehydrogenase [Streptosporangium roseum DSM 43021] gi|270510856|gb|ACZ89134.1| 2-oxoisovalerate dehydrogenase [Streptosporangium roseum DSM 43021] Length = 736 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 20/158 (12%) Query: 160 VGAQVSLGTGIAFANKYRRS---------DKICVVCFGDGAANQGQVYESFNIAALWN-- 208 + + + G+AFA + R D I V FGD + N N AA + Sbjct: 153 IASHLPRAVGVAFAIERARQLGLAGAWPGDAIAVCGFGDASVNHASALSGLNTAAYGSYQ 212 Query: 209 ---LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + V++V E+N +G SV ++ + + + DG D+ V A Sbjct: 213 GLAMPVLFVCEDN--GLGISVRTPDGWVEAARHRL---LEYFEADGCDLADVHDVARAAA 267 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEIN 302 + R H+ P ++ + T R GH+ SD +YRT+ EIN Sbjct: 268 EHVRRHRSPALLHISTVRLMGHAGSDVELSYRTKREIN 305 >gi|281208341|gb|EFA82517.1| 2-oxoglutarate dehydrogenase [Polysphondylium pallidum PN500] Length = 1030 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/197 (21%), Positives = 94/197 (47%), Gaps = 11/197 (5%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 +A ++ + ++ GD + A QG VYE+ +++ L N + I+++ NNQ T+ S Sbjct: 404 YAGDTEQNTALAIILHGDASIAGQGVVYETLHLSKLANYSTGGTIHIVVNNQIGFTTNPS 463 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + ++P V+G D+ AV A + + K +I++++ YR GH Sbjct: 464 SSRSSMYCTDVAKTIDVPIFHVNGDDVEAVVRVCKLAAEWRQRFKRDVIVDIVCYRRFGH 523 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE-- 345 + +D + ++ +E+ K+L+ K + +++ R +I ++ E Sbjct: 524 NETDQPKFTQPLMYTKIGQQTPVMEKYSKQLIDEKVLTSDQYQQM----RSVIRDAYEKG 579 Query: 346 FAQSDK-EPDPAELYSD 361 F + K P P++ + + Sbjct: 580 FQEGMKYTPKPSDWFEN 596 >gi|317151803|ref|YP_004119851.1| transketolase domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316942054|gb|ADU61105.1| Transketolase domain-containing protein [Desulfovibrio aespoeensis Aspo-2] Length = 273 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 15/198 (7%) Query: 96 KMSLTEGDQMITAYREHGHILACGVDAS-----KIMAELTGRQGGISKG-KGGSMHMFST 149 K L EG + + HG I + A + E G+ G + K + + T Sbjct: 55 KEPLAEGRDRLVISKGHGSISLYPILADLGFIDPLELERPGQPGALLKAIPDPHIPGYET 114 Query: 150 KNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL 209 NG G HGI +G G+A + + S VV GDG ++G ++E +AA L Sbjct: 115 VNGSLG-HGI-----GVGAGMALGLRAKWSGSRVVVLCGDGELHEGAMWEGVMLAARHQL 168 Query: 210 -NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 N+ +++NN+ M + + +F +VDG D+ AV+A + +A+ Sbjct: 169 ANLTLIVDNNRQCMLDFSQEVLGLAPLADKFRAFGWDTAEVDGHDVAAVRAVLQQALV-- 226 Query: 269 RAHKGPIIIEMLTYRYRG 286 R GP+ + T + RG Sbjct: 227 RTSGGPMAVVANTIKGRG 244 >gi|154484282|ref|ZP_02026730.1| hypothetical protein EUBVEN_01994 [Eubacterium ventriosum ATCC 27560] gi|149734759|gb|EDM50676.1| hypothetical protein EUBVEN_01994 [Eubacterium ventriosum ATCC 27560] Length = 278 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K +D GDG + +GQV+E+ A L N++ +++ Sbjct: 115 GSLGQGISTAVGMAMAGKMDNADYRVYTMVGDGESEEGQVWEASMFAGFRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + ++ + F K+ +FN ++++G D +++ + +A R KG P Sbjct: 175 NNNLQIDGAIDEVCSPYPFDKKFEAFNFHVIKINGHDFDEIRSALKEA----RETKGMPT 230 Query: 276 IIEMLTYRYRGHSM 289 I M T + +G S Sbjct: 231 AIIMNTVKGKGVSF 244 >gi|15644626|ref|NP_228762.1| transketolase, N-terminal subunit [Thermotoga maritima MSB8] gi|222100596|ref|YP_002535164.1| transketolase, N-terminal subunit [Thermotoga neapolitana DSM 4359] gi|221572986|gb|ACM23798.1| transketolase, N-terminal subunit [Thermotoga neapolitana DSM 4359] Length = 286 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +++G G+A A K D V GDG ++G V+E+ +A+ ++L N+I +++ Sbjct: 120 GALGHGLAIGVGMALAGKMDGKDYKVYVLMGDGELDEGSVWEAAQVASHYSLDNLIGIVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + SKR +F ++VDG D ++ T V+ R P + Sbjct: 180 RNRLQISGHTEEVLKLEPLSKRWEAFGWNVLEVDGHDFESLYKTF---VSIPRETGKPHL 236 Query: 277 IEMLTYRYRGHSMSD---------PANYRTREEINEMRSNHDPIEQ 313 I T + +G S + P++ R+ I E+ +E+ Sbjct: 237 IIANTIKGKGISFIEGRVEWHHKVPSDEEYRKAIEELEEQLKTLEE 282 >gi|54298569|ref|YP_124938.1| hypothetical protein lpp2633 [Legionella pneumophila str. Paris] gi|53752354|emb|CAH13786.1| hypothetical protein lpp2633 [Legionella pneumophila str. Paris] Length = 745 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 12/168 (7%) Query: 180 DKICVVCFGDGAANQGQVYESFNIAAL-----WNLNVIYVIENNQYAMGTSVSRASAQTN 234 D + + FGD + N + N + + L ++++ E+N + + +++ Sbjct: 180 DSVILCSFGDASTNHATSQATLNACSWITQQNYPLPIVFICEDNGIGISVPTPSSWIKSS 239 Query: 235 FSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-P 292 S R G+ + ++ DG++I V A +A R K P+ + M R GH+ SD Sbjct: 240 VSSRPGIHY----IECDGLNIADVFAKAQEADYLARVKKQPVFLHMRCVRLLGHAGSDIE 295 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 + Y T+EEI E R +DP+ L W S + E+ + R +I Sbjct: 296 SQYNTQEEI-EQREANDPLLHTAGILYREGWMSLQAMVELYQDNRALI 342 >gi|24213924|ref|NP_711405.1| alpha-ketoglutarate decarboxylase [Leptospira interrogans serovar Lai str. 56601] gi|45658316|ref|YP_002402.1| 2-oxoglutarate dehydrogenase E1 component [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|81407018|sp|Q72PJ7|ODO1_LEPIC RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|81589764|sp|Q8F6S7|ODO1_LEPIN RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|24194778|gb|AAN48423.1| alpha-ketoglutarate decarboxylase [Leptospira interrogans serovar Lai str. 56601] gi|45601558|gb|AAS71039.1| oxoglutarate dehydrogenase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 920 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 11/166 (6%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG V E+ N+ L +++ NNQ T + + Sbjct: 332 RSKYMPILIHGDAAFAGQGVVAETLNLMNLEGYTTGGTFHIVVNNQIGFTTLPDESRSTL 391 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + F IP + V+G D AV + + Y + K II+++ YR GH+ +D Sbjct: 392 YATDLAKGFQIPIIHVNGDDPEAVYRVVKLGMEYRQKFKKDFIIDLVCYRRLGHNETDEP 451 Query: 294 NYRTREEINEMRSNHDP-IEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + T+ ++ + NH P ++ KRL+ EGD+ + +++ K Sbjct: 452 AF-TQPKMYAIIKNHPPTVKLYEKRLVE-----EGDIPQEDIDFIK 491 >gi|148358689|ref|YP_001249896.1| 2-oxoisovalerate dehydrogenase E1 component subunits alpha/beta [Legionella pneumophila str. Corby] gi|296108222|ref|YP_003619923.1| 2-oxoisovalerate dehydrogenase beta subunit [Legionella pneumophila 2300/99 Alcoy] gi|148280462|gb|ABQ54550.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Legionella pneumophila str. Corby] gi|295650124|gb|ADG25971.1| 2-oxoisovalerate dehydrogenase beta subunit [Legionella pneumophila 2300/99 Alcoy] Length = 745 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 12/168 (7%) Query: 180 DKICVVCFGDGAANQGQVYESFNIAAL-----WNLNVIYVIENNQYAMGTSVSRASAQTN 234 D + + FGD + N + N + + L ++++ E+N + + +++ Sbjct: 180 DSVILCSFGDASTNHATSQATLNACSWITQQNYPLPIVFICEDNGIGISVPTPSSWIKSS 239 Query: 235 FSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-P 292 S R G+ + ++ DG++I V A +A R K P+ + M R GH+ SD Sbjct: 240 VSSRPGIHY----IECDGLNIADVFAKAQEADYLARVKKQPVFLHMRCVRLLGHAGSDIE 295 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 + Y T+EEI E R +DP+ L W S + E+ + R +I Sbjct: 296 SQYNTQEEI-EQREANDPLLHTAGILYKEGWMSLQAMVELYQDNRALI 342 >gi|302502401|ref|XP_003013191.1| hypothetical protein ARB_00375 [Arthroderma benhamiae CBS 112371] gi|302659068|ref|XP_003021229.1| hypothetical protein TRV_04661 [Trichophyton verrucosum HKI 0517] gi|291176754|gb|EFE32551.1| hypothetical protein ARB_00375 [Arthroderma benhamiae CBS 112371] gi|291185117|gb|EFE40611.1| hypothetical protein TRV_04661 [Trichophyton verrucosum HKI 0517] Length = 1050 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 4/166 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I+++ NNQ T A + S Sbjct: 429 VLLHGDAAFAAQGIVYETMGFHSLPAYSTGGTIHIVVNNQIGFTTDPRFARSTPYCSDIA 488 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+++ YR +GH+ +D + Sbjct: 489 KAIDAPVFHVNGDDVEALNHVCQLAADWRAQFKSDVVIDIVCYRKQGHNETDQPAFTQPL 548 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + S I++ ++LL K ++ D+ E + V ++N+S E Sbjct: 549 MYKRIASQQSQIDKYVEKLLKEKTFTKEDIDEHKKWVWGMLNDSFE 594 >gi|327295470|ref|XP_003232430.1| oxoglutarate dehydrogenase [Trichophyton rubrum CBS 118892] gi|326465602|gb|EGD91055.1| oxoglutarate dehydrogenase [Trichophyton rubrum CBS 118892] Length = 1050 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 4/166 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I+++ NNQ T A + S Sbjct: 429 VLLHGDAAFAAQGIVYETMGFHSLPAYSTGGTIHIVVNNQIGFTTDPRFARSTPYCSDIA 488 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+++ YR +GH+ +D + Sbjct: 489 KAIDAPVFHVNGDDVEALNHVCQLAADWRAQFKSDVVIDIVCYRKQGHNETDQPAFTQPL 548 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + S I++ ++LL K ++ D+ E + V ++N+S E Sbjct: 549 MYKRIASQQSQIDKYVEKLLKEKTFTKEDIDEHKKWVWGMLNDSFE 594 >gi|326485345|gb|EGE09355.1| 2-oxoglutarate dehydrogenase E1 component [Trichophyton equinum CBS 127.97] Length = 1050 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 4/166 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I+++ NNQ T A + S Sbjct: 429 VLLHGDAAFAAQGIVYETMGFHSLPAYSTGGTIHIVVNNQIGFTTDPRFARSTPYCSDIA 488 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+++ YR +GH+ +D + Sbjct: 489 KAIDAPVFHVNGDDVEALNHVCQLAADWRAQFKSDVVIDIVCYRKQGHNETDQPAFTQPL 548 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + S I++ ++LL K ++ D+ E + V ++N+S E Sbjct: 549 MYKRIASQQSQIDKYVEKLLKEKTFTKEDIDEHKKWVWGMLNDSFE 594 >gi|326475719|gb|EGD99728.1| 2-oxoglutarate dehydrogenase E1 component [Trichophyton tonsurans CBS 112818] Length = 1013 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 4/166 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I+++ NNQ T A + S Sbjct: 392 VLLHGDAAFAAQGIVYETMGFHSLPAYSTGGTIHIVVNNQIGFTTDPRFARSTPYCSDIA 451 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+++ YR +GH+ +D + Sbjct: 452 KAIDAPVFHVNGDDVEALNHVCQLAADWRAQFKSDVVIDIVCYRKQGHNETDQPAFTQPL 511 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + S I++ ++LL K ++ D+ E + V ++N+S E Sbjct: 512 MYKRIASQQSQIDKYVEKLLKEKTFTKEDIDEHKKWVWGMLNDSFE 557 >gi|58616992|ref|YP_196191.1| alpha-ketoglutarate decarboxylase [Ehrlichia ruminantium str. Gardel] gi|58416604|emb|CAI27717.1| 2-oxoglutarate dehydrogenase E1 component [Ehrlichia ruminantium str. Gardel] Length = 913 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 7/181 (3%) Query: 184 VVCFGDGAA-NQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A QG V E+ ++ L+ V I+++ NNQ T+ + + S Sbjct: 326 VLVHGDAAVIGQGIVAETLTLSNLFGYKVCGVIHIVVNNQVGFTTNPEDSRSSLYCSDIA 385 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + P V+G + AV + AV Y + ++I+++ YR GH+ D + Sbjct: 386 RIIDAPVFHVNGDSMEAVTTAVKLAVEYRQKFNKDVVIDIVCYRRYGHNEGDEPLFTQPV 445 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE-PDPAEL 358 N + + P++ ++L++NK ++ D ++ ++ S EFA S+ PD A+ Sbjct: 446 MYNRIIKHKTPMKLYAEQLINNKVITQEDFNVLQDQFHSVL--SEEFASSENYFPDQADW 503 Query: 359 Y 359 + Sbjct: 504 F 504 >gi|57238996|ref|YP_180132.1| 2-oxoglutarate dehydrogenase E1 component [Ehrlichia ruminantium str. Welgevonden] gi|57161075|emb|CAH57982.1| 2-oxoglutarate dehydrogenase E1 component [Ehrlichia ruminantium str. Welgevonden] Length = 913 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 7/181 (3%) Query: 184 VVCFGDGAA-NQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A QG V E+ ++ L+ V I+++ NNQ T+ + + S Sbjct: 326 VLVHGDAAVIGQGIVAETLTLSNLFGYKVCGVIHIVVNNQVGFTTNPEDSRSSLYCSDIA 385 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + P V+G + AV + AV Y + ++I+++ YR GH+ D + Sbjct: 386 RIIDAPVFHVNGDSMEAVTTAVKLAVEYRQKFNKDVVIDIVCYRRYGHNEGDEPLFTQPV 445 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE-PDPAEL 358 N + + P++ ++L++NK ++ D ++ ++ S EFA S+ PD A+ Sbjct: 446 MYNRIIKHKTPMKLYAEQLINNKVITQEDFNVLQDQFHSVL--SEEFASSENYFPDQADW 503 Query: 359 Y 359 + Sbjct: 504 F 504 >gi|325107360|ref|YP_004268428.1| 2-oxoglutarate dehydrogenase E1 component [Planctomyces brasiliensis DSM 5305] gi|324967628|gb|ADY58406.1| 2-oxoglutarate dehydrogenase E1 component [Planctomyces brasiliensis DSM 5305] Length = 961 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 4/194 (2%) Query: 162 AQVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIEN 217 AQ L + + ++ + V+ GD A +G V E+ N++ L +V ++V+ N Sbjct: 353 AQGRLRSKMDRYRDFKHERGMTVMIHGDAAFIGEGVVQETLNLSELPGYSVGGTLHVVVN 412 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 NQ T+ ++ + T + IP V+G D AV + A+ + R +II Sbjct: 413 NQIGFTTTKEQSRSSTYATDVAKMLQIPIFHVNGEDPEAVAQVVGLALDFRRTFHRDVII 472 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 +M +R GH+ SD + ++++ E +LL + + + ++I R Sbjct: 473 DMYCFRKLGHNESDEPEFTQPIMYSDIKKRQSVFESYLDQLLGMRGITREEAEQIVEQRR 532 Query: 338 KIINNSVEFAQSDK 351 +++ +E A+ D+ Sbjct: 533 QVLEAELEAARRDQ 546 >gi|260062817|ref|YP_003195897.1| 2-oxoisovalerate dehydrogenase, E1 component subunit beta [Robiginitalea biformata HTCC2501] gi|88784385|gb|EAR15555.1| 2-oxoisovalerate dehydrogenase, E1 component beta subunit [Robiginitalea biformata HTCC2501] Length = 803 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 76/350 (21%), Positives = 136/350 (38%), Gaps = 49/350 (14%) Query: 49 KEQELSAYRLMLLIRR--FEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KEQ L YR +L R + L G G F G+E + M + GD Sbjct: 17 KEQILQDYRTAVLSRECSILGRREVLTGKAKFGIFGD---GKELPQLAMARAYRNGDFRS 73 Query: 107 TAYREHGHILACGVDASK-------------IMAELTGRQ-----GGISKGKGGSMHMFS 148 YR+ ++A G+ K + GRQ G S + GS + Sbjct: 74 GYYRDQTFMMALGLLTPKDFFHGLYATTDISLEPMSAGRQMGGHFGTYSLNEDGSWKDLT 133 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRS-------------DKICVVCFGDGAANQG 195 + AQ+ G+A A+K R+ +++ G+ + ++G Sbjct: 134 AQPNSSPDISPTAAQMPRLLGLAQASKIYRNLESVPSDGFSNQGNEVAWGTIGNASTSEG 193 Query: 196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF----NIPG---MQ 248 +E+ N A + + +I + ++ Y + + + + S+ F PG + Sbjct: 194 HFFETINAAGVLQVPMIVSVWDDAYGISVPAEYQTTKEDISEILKGFQRTETAPGYEIFK 253 Query: 249 VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY-RYRGHSMSDPANYRTREEINEMRSN 307 V G D A+ T + A R + P++I + + +GHS S +E + Sbjct: 254 VQGWDYTALIHTYENAADIARENHVPVLIHVTELTQPQGHSTSGSHERYKSDERLKWEKK 313 Query: 308 HDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS-----VEFAQSDKE 352 HD + R+ +L N+ SE +L ++E V+K + ++ EF Q +E Sbjct: 314 HDCNTRFREWILENRIVSEEELSDLEKAVKKEVRSAKKDAWAEFLQPHRE 363 >gi|294054624|ref|YP_003548282.1| 2-oxoglutarate dehydrogenase, E1 subunit [Coraliomargarita akajimensis DSM 45221] gi|293613957|gb|ADE54112.1| 2-oxoglutarate dehydrogenase, E1 subunit [Coraliomargarita akajimensis DSM 45221] Length = 913 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 8/187 (4%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E FN + L I+++ NNQ TS + A + Sbjct: 326 RKRVLPILIHGDAAVAGQGIVSEVFNFSQLEGYRTGGTIHIVVNNQIGFTTSPTDARSSR 385 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + P V+G D AV A M+ A Y + ++I+M +R GH+ SD Sbjct: 386 YCTDVAKIVEAPIFHVNGNDPLAVVAAMEAAFDYRQTFGCDVVIDMYCWRKHGHNESDEP 445 Query: 294 NYRTREEINEMRSNHDPI-EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF--AQSD 350 + T+ + + S+ PI + +RL++N S+ D+ +E + + + + E A+ + Sbjct: 446 AF-TQPVLYKTISSMKPIGRSLAERLINNGEFSKDDIDGLENSYMERLEAAFERVKAEEN 504 Query: 351 KEPDPAE 357 + DP E Sbjct: 505 VKSDPFE 511 >gi|76788767|ref|YP_327853.1| alpha-ketoglutarate decarboxylase [Chlamydia trachomatis A/HAR-13] gi|237802489|ref|YP_002887683.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis B/Jali20/OT] gi|237804404|ref|YP_002888558.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis B/TZ1A828/OT] gi|76167297|gb|AAX50305.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis A/HAR-13] gi|231272704|emb|CAX09607.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis B/TZ1A828/OT] gi|231273723|emb|CAX10501.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis B/Jali20/OT] Length = 903 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 13/180 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG-TSVSRASAQTNF- 235 + V+ GD A A QG VYE+F ++ + + ++++ NNQ MG T+ R S T + Sbjct: 318 LAVLMHGDAALAGQGVVYETFQLSGIPGYSTEGTVHIVVNNQ--MGFTAQPRESRSTPYC 375 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + IP +V+G DI A M+ A+ +II++ YR GH+ SD Sbjct: 376 TDIAKMMGIPVFRVNGEDILACLQVMEYAIHIRERFHCDVIIDLCCYRKYGHNESDDPFV 435 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHN-KW-ASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 E++ E ++ LLH+ +W S +L+ I+ + ++N E+A S K+P Sbjct: 436 TAPFLYEEIKKKKQGSELFKEILLHHPEWNISSDELERIDTEIAHVLNQ--EYA-SLKDP 492 >gi|296435571|gb|ADH17745.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis G/9768] gi|296436495|gb|ADH18665.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis G/11222] gi|296437431|gb|ADH19592.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis G/11074] gi|297139930|gb|ADH96688.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis G/9301] Length = 905 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 13/180 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG-TSVSRASAQTNF- 235 + V+ GD A A QG VYE+F ++ + + ++++ NNQ MG T+ R S T + Sbjct: 318 LAVLMHGDAALAGQGVVYETFQLSGIPGYSTEGTVHIVVNNQ--MGFTAQPRESRSTPYC 375 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + IP +V+G DI A M+ A+ +II++ YR GH+ SD Sbjct: 376 TDIAKMMGIPVFRVNGEDILACLQVMEYAIHIRERFHCDVIIDLCCYRKYGHNESDDPFV 435 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHN-KW-ASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 E++ E ++ LLH+ +W S +L+ I+ + ++N E+A S K+P Sbjct: 436 TAPFLYEEIKKKKQGSELFKEILLHHPEWNISSDELERIDTEIAHVLNQ--EYA-SLKDP 492 >gi|254442372|ref|ZP_05055848.1| 2-oxoglutarate dehydrogenase, E1 component [Verrucomicrobiae bacterium DG1235] gi|198256680|gb|EDY80988.1| 2-oxoglutarate dehydrogenase, E1 component [Verrucomicrobiae bacterium DG1235] Length = 912 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 6/184 (3%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R + V+ GD A A QG V E N + L +++I NNQ T+ A Sbjct: 321 NDTNRDKVLPVLVHGDAAFAGQGIVTEVLNSSQLPGYRTGGTLHIIVNNQIGFTTTPKEA 380 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + P V+G D AV A+ Y + ++I+M YR GH+ Sbjct: 381 RSTRYCTDVAKMIEAPIFHVNGDDPLAVVYVTMLAIEYRQKFNADVVIDMYCYRKHGHNE 440 Query: 290 SDPANYRTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + T E+ + S H P+ ++ RL+ + S+ +++++ + NS+E + Sbjct: 441 ADEPMF-TNPELYDKISKHPPVSEILTNRLIEDGTLSKEEIEKLRSEYENSLANSLERVK 499 Query: 349 SDKE 352 E Sbjct: 500 KSAE 503 >gi|15604773|ref|NP_219557.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis D/UW-3/CX] gi|3328447|gb|AAC67645.1| Oxoglutarate Dehydrogenase [Chlamydia trachomatis D/UW-3/CX] gi|297748184|gb|ADI50730.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis D-EC] gi|297749064|gb|ADI51742.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis D-LC] Length = 905 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 13/180 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG-TSVSRASAQTNF- 235 + V+ GD A A QG VYE+F ++ + + ++++ NNQ MG T+ R S T + Sbjct: 318 LAVLMHGDAALAGQGVVYETFQLSGIPGYSTEGTVHIVVNNQ--MGFTAQPRESRSTPYC 375 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + IP +V+G DI A M+ A+ +II++ YR GH+ SD Sbjct: 376 TDIAKMMGIPVFRVNGEDILACLQVMEYAIHIRERFHCDVIIDLCCYRKYGHNESDDPFV 435 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHN-KW-ASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 E++ E ++ LLH+ +W S +L+ I+ + ++N E+A S K+P Sbjct: 436 TAPFLYEEIKKKKQGSELFKEILLHHPEWNISSDELERIDTEIAHVLNQ--EYA-SLKDP 492 >gi|289525099|emb|CBJ14570.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis Sweden2] gi|296434641|gb|ADH16819.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis E/150] gi|296438358|gb|ADH20511.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis E/11023] Length = 903 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 11/179 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + V+ GD A A QG VYE+F ++ + + ++++ NNQ T+ R S T + + Sbjct: 318 LAVLMHGDAALAGQGVVYETFQLSGIPGYSTEGTMHIVVNNQIGF-TAQPRESRSTPYCT 376 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 IP +V+G D+ A M+ A+ +II++ YR GH+ SD + Sbjct: 377 DIAKMMGIPVFRVNGEDVLACLQVMEYAIHIRERFHCDVIIDLCCYRKYGHNESDDPSVT 436 Query: 297 TREEINEMRSNHDPIEQVRKRLLHN-KW-ASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 E++ E ++ LLH+ +W S +L+ I+ + ++N E+A S K+P Sbjct: 437 APFLYEEIKKKKQGSELFKEILLHHPEWNISSDELERIDTEIAHVLNQ--EYA-SLKDP 492 >gi|163743372|ref|ZP_02150752.1| dehydrogenase/transketolase family protein [Phaeobacter gallaeciensis 2.10] gi|161383366|gb|EDQ07755.1| dehydrogenase/transketolase family protein [Phaeobacter gallaeciensis 2.10] Length = 729 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 21/196 (10%) Query: 134 GGISKGKGGSMHMFSTKNGFYGGH--GIVGAQVSLGTGIAFANKYR--RSDKICVVCFGD 189 GG K G M + H VGA S+G ++R D + + FGD Sbjct: 126 GGRHKVLGSKALMIPPQTSTIASHLPKAVGAAYSIGAARRHDPEHRVLAEDGLVMCSFGD 185 Query: 190 GAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 +AN + N A W L +++V E+N + + + + S R Sbjct: 186 ASANHSTAQGAINTAC-WTSVQSTPLPLLFVCEDNGIGISVKTPKGWIEASMSHR----- 239 Query: 244 IPGM---QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTRE 299 PGM Q DG+++ AT A Y R + P + + T R GH+ +D P Y ++ Sbjct: 240 -PGMRYFQADGLNMHDAYATAQAAAEYVRLRRKPAFLHLRTVRLYGHAGADVPTTYLSKA 298 Query: 300 EINEMRSNHDPIEQVR 315 E+ +N + VR Sbjct: 299 EVEADEANDPLLHSVR 314 >gi|149006896|ref|ZP_01830577.1| transketolase N-terminal subunit [Streptococcus pneumoniae SP18-BS74] gi|149007863|ref|ZP_01831450.1| transketolase N-terminal subunit [Streptococcus pneumoniae SP18-BS74] gi|147760590|gb|EDK67564.1| transketolase N-terminal subunit [Streptococcus pneumoniae SP18-BS74] gi|147761497|gb|EDK68462.1| transketolase N-terminal subunit [Streptococcus pneumoniae SP18-BS74] Length = 285 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 16/162 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + R+S GDG N+GQ +E+ A+ L N+I ++ Sbjct: 120 GSLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK-GPI 275 +N+ + +F ++ +F ++V G DIR + + V ++H P Sbjct: 180 DNKKQLDGFTKDICNPGDFVEKFSAFGFESIRVKGSDIREI---YEGIVQLKQSHNSSPK 236 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 I + T + +G +E+ EM+SNH V +R Sbjct: 237 CIVLDTIKGQG-----------VQELEEMKSNHHLRPTVEER 267 >gi|254282071|ref|ZP_04957039.1| dehydrogenase/transketolase family protein [gamma proteobacterium NOR51-B] gi|219678274|gb|EED34623.1| dehydrogenase/transketolase family protein [gamma proteobacterium NOR51-B] Length = 729 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 18/144 (12%) Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALW------NLNVIYVIENNQYAMGTSVSRASA 231 R D I FGD +AN + N AA W L +++V E+N + Sbjct: 174 RRDSIVACTFGDASANHSTAQGAINTAA-WMGYRGLRLPILFVCEDNGIGISVPTPEGWI 232 Query: 232 QTNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++F R PG++ DG++ A +AV + R + P + + R GH+ Sbjct: 233 ASSFQHR------PGLRYFYADGLNAYDAYAVAREAVEHVREQRQPAFLHLSMVRLLGHA 286 Query: 289 MSDPA-NYRTREEINEMRSNHDPI 311 SDP +YR+ E+I DPI Sbjct: 287 GSDPEISYRSSEDIAS-DEQQDPI 309 >gi|238922755|ref|YP_002936268.1| transketolase domain protein [Eubacterium rectale ATCC 33656] gi|238874427|gb|ACR74134.1| transketolase domain protein [Eubacterium rectale ATCC 33656] gi|291527024|emb|CBK92610.1| Transketolase, N-terminal subunit [Eubacterium rectale M104/1] Length = 284 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 15/153 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN-----LNVI 212 G +G VS+ G+A A KY + D GDG +GQ++E AA+W N++ Sbjct: 121 GSLGQGVSVAVGMAAAGKYDKKDYRVYTLTGDGEIQEGQIWE----AAMWAGHRKLDNLV 176 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +++NN + SV + K+ +FN + +DG D ++A +A R K Sbjct: 177 VIVDNNNLQIDGSVEDVCSPYPIDKKFEAFNFHVINIDGNDFDQIRAAFKEA----RETK 232 Query: 273 G-PIIIEMLTYRYRGHS-MSDPANYRTREEINE 303 G P I T + +G S M + A + + +E Sbjct: 233 GMPTAIIAKTVKGKGVSFMENAAGWHGKAPNDE 265 >gi|149374986|ref|ZP_01892759.1| 2-oxoglutarate dehydrogenase, E1 component [Marinobacter algicola DG893] gi|149360875|gb|EDM49326.1| 2-oxoglutarate dehydrogenase, E1 component [Marinobacter algicola DG893] Length = 945 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 24/210 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + ++ GD A A QG V E+F ++ V I+++ NNQ Sbjct: 340 GSVRARQTRRNDPNGTQCVPIIMHGDAAFAGQGVVMETFQMSQTRGYGVGGTIHIVINNQ 399 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS + T + + P + V+ D AV A+ Y K ++I+ Sbjct: 400 VGFTTSKQEDARSTEYCTDVAKMIQAPILHVNADDPEAVMFVTQMAMDYRHEFKNDVVID 459 Query: 279 MLTYRYRGHSMSD------PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 ++ YR RGH+ +D P Y ++ R+ + ++L+ + SE + K+I Sbjct: 460 LVCYRRRGHNEADEPAATQPVMYEKIRKLTTTRNLY------AEKLVADGVISEDEAKQI 513 Query: 333 EMNVRKIINNSVEFAQS-DKEPDPAELYSD 361 E++ R ++ +S KEP+ +LY D Sbjct: 514 ELDYRDELDKGDHVVKSLVKEPN-KDLYVD 542 >gi|148985015|ref|ZP_01818258.1| probable transketolase [Streptococcus pneumoniae SP3-BS71] gi|147922713|gb|EDK73830.1| probable transketolase [Streptococcus pneumoniae SP3-BS71] gi|301800022|emb|CBW32615.1| Transketolase [Streptococcus pneumoniae OXC141] Length = 270 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 1/88 (1%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G G +G S+G G+A+ NK ++SDK V GDG N+GQV+E+F NL N++++ Sbjct: 106 GLGSLGQGPSIGVGMAWVNKRKKSDKKIFVMLGDGELNEGQVWEAFYTCRNLNLQNLVFI 165 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSF 242 I+ N + + N +++ SF Sbjct: 166 IDRNFLQLDGKCEDVANFPNLAQKISSF 193 >gi|311694412|gb|ADP97285.1| alpha-ketoglutarate decarboxylase [marine bacterium HP15] Length = 940 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 18/207 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + ++ GD A A QG V E+F ++ V I+++ NNQ Sbjct: 335 GSVRARQTRRNDNEGTKVVPIIMHGDAAFAGQGVVMETFQMSQTRGFGVGGTIHIVINNQ 394 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS + T + + P + V+ D AV A+ Y K ++I+ Sbjct: 395 VGFTTSKQEDARSTEYCTDVAKMIQAPILHVNADDPEAVMFVTQMAMDYRNEFKNDVVID 454 Query: 279 MLTYRYRGHSMSD-PANYRT--REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 ++ YR RGH+ +D PA + E+I ++++ + +L+ +E + K++E + Sbjct: 455 LVCYRRRGHNEADEPAATQPVMYEKIRKLKTTRN---LYVDQLVEAGVITEEEAKQMEND 511 Query: 336 VRKIINNSVEFAQS-DKEPDPAELYSD 361 R ++N +S KEP+ ELY D Sbjct: 512 YRDALDNGEHVVKSLVKEPN-KELYVD 537 >gi|222153853|ref|YP_002563030.1| transketolase subunit [Streptococcus uberis 0140J] gi|222114666|emb|CAR43728.1| putative transketolase subunit [Streptococcus uberis 0140J] Length = 285 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 16/153 (10%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S TGIA+ K + + GDG N+GQ +E+ AA L N+I ++ Sbjct: 120 GSLGQGISAATGIAYGQKINQEPFVTYTIVGDGELNEGQCWEAIQFAAHQKLSNLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV-KATMDKAVAYCRAHKGPI 275 +N+ + S +F + +F ++VDG +I A+ +A MD + A + P Sbjct: 180 DNKKQLDGLTSDICQSGDFVAKFEAFGFEAIRVDGQNIAAIHQALMDFKNS---ASEKPK 236 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNH 308 I + T + +G +EI M SNH Sbjct: 237 CIVLDTVKGQG-----------VKEIENMASNH 258 >gi|88801563|ref|ZP_01117091.1| 2-oxoglutarate dehydrogenase, E1 component [Polaribacter irgensii 23-P] gi|88782221|gb|EAR13398.1| 2-oxoglutarate dehydrogenase, E1 component [Polaribacter irgensii 23-P] Length = 911 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 6/175 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG YE +A L I+++ NNQ T+ A + T + Sbjct: 329 LSIIIHGDAAIAGQGIAYEIVQMAKLNGYKTGGTIHIVVNNQIGFTTNYLDARSSTYCTD 388 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 G P + V+ D AV M A+A+ + I I++L YR GH+ D + T Sbjct: 389 VGKVTLSPVLHVNADDTEAVCHAMQMALAFRMKFESDIFIDLLGYRKYGHNEGDEPRF-T 447 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + ++ + + H ++ + +RLL E L EI + ++ + ++ DK Sbjct: 448 QPKLYKAIAKHQNVKDIYAERLLKEGSIDENYLTEITSEFKNMLEKEFDLSKEDK 502 >gi|269123904|ref|YP_003306481.1| Transketolase domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268315230|gb|ACZ01604.1| Transketolase domain protein [Streptobacillus moniliformis DSM 12112] Length = 271 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 7/130 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TGIA A K ++ + GDG A +GQV+E+ A NL N+I I+ Sbjct: 113 GSLGQGISIATGIAKALKIQKKENRVFTIIGDGEAQEGQVWEAMQFIAHHNLNNLIVFID 172 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + + +F ++ SF + V G DI A+K A + P++ Sbjct: 173 YNKQQLDGYLEDICKPYSFEEKVKSFGLEASTVKGDDIEAIKK------AILLQGEKPLV 226 Query: 277 IEMLTYRYRG 286 I + T + +G Sbjct: 227 IILDTIKGQG 236 >gi|256420692|ref|YP_003121345.1| transketolase domain protein [Chitinophaga pinensis DSM 2588] gi|256035600|gb|ACU59144.1| Transketolase domain protein [Chitinophaga pinensis DSM 2588] Length = 799 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 81/345 (23%), Positives = 134/345 (38%), Gaps = 56/345 (16%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQ--LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 EF KE L+ YRL R A + L G G F G+E + M GD Sbjct: 19 EFRKEV-LNDYRLACESREVSLLARKEVLTGKAKFGIFGD---GKEVAQIAMAKYFQPGD 74 Query: 104 QMITAYREHGHILACGVDA-----SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 YR+ A G+ S++ A+ S G+ + H F+T N G+ Sbjct: 75 FRSGYYRDQTFAFATGIATPEQFFSQMYADPDLANEPFSGGRQMNSH-FATPNLAKDGNW 133 Query: 159 I--------------VGAQVSLGTGIAFANKYRRS--------------DKICVVCFGDG 190 + AQ+ G+AFA+K R ++IC GD Sbjct: 134 LDLTSIKNTATDMSPTAAQMPRALGLAFASKLFRDVEVLKEFSKLSNNGNEICFATIGDA 193 Query: 191 AANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR---------ASAQTNFSKRGVS 241 + ++G +E+ N A + + + + ++ Y G SV R ++A F K S Sbjct: 194 STSEGHFWETMNAAGVLQVPLAVFVWDDGY--GISVPRKYQTTKDSISAALEGFRKTEDS 251 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII--IEMLTYRYRGHSMS-DPANYRTR 298 V G D A+ T + + R P + +E +T + +GHS S Y+++ Sbjct: 252 NGFDIYTVKGWDYAAMCETFEAGIRKMRETHIPALFHVEEMT-QPQGHSTSGSHERYKSK 310 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 E ++ D Q+R+ +L N + E L +E + + N+ Sbjct: 311 ERLS-WEKEFDCNNQMRQWILENALSDEATLLAVEAEAKTVAQNA 354 >gi|121601785|ref|YP_988364.1| alpha-ketoglutarate decarboxylase [Bartonella bacilliformis KC583] gi|120613962|gb|ABM44563.1| 2-oxoglutarate dehydrogenase, E1 component [Bartonella bacilliformis KC583] Length = 999 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 4/146 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + V+ GD A A QG + E+F ++ L +V I+VI NNQ TS + + + Sbjct: 396 RSKVMPVLIHGDAAFAGQGVLQETFGLSGLKGYHVAGSIHVIINNQIGFTTSPNFSRSSP 455 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV A + + P+II+M+ YR GH+ D Sbjct: 456 YSSDVAKMIDAPVFHVNGDDPEAVVFVAKVATEFRQIFHKPVIIDMVCYRRYGHNEGDEP 515 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLL 319 ++ +R++ ++ RL+ Sbjct: 516 SFTQPVMYKAIRNHQTTVQIYSDRLI 541 >gi|291526535|emb|CBK92122.1| Transketolase, N-terminal subunit [Eubacterium rectale DSM 17629] Length = 284 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 15/153 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN-----LNVI 212 G +G VS+ G+A A KY + D GDG +GQ++E AA+W N++ Sbjct: 121 GSLGQGVSVAVGMAAAGKYDKKDYRVYTLTGDGEIQEGQIWE----AAMWAGHRKLDNLV 176 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +++NN + S+ + K+ +FN + +DG D ++A +A R K Sbjct: 177 VIVDNNNLQIDGSIEDVCSPYPIDKKFEAFNFHVINIDGNDFDQIRAAFKEA----RETK 232 Query: 273 G-PIIIEMLTYRYRGHS-MSDPANYRTREEINE 303 G P I T + +G S M + A + + +E Sbjct: 233 GMPTAIIAKTVKGKGVSFMENAAGWHGKAPNDE 265 >gi|116328746|ref|YP_798466.1| alpha-ketoglutarate decarboxylase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331657|ref|YP_801375.1| alpha-ketoglutarate decarboxylase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121490|gb|ABJ79533.1| Oxoglutarate dehydrogenase (lipoamide), dehydrogenase (E1) component [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125346|gb|ABJ76617.1| Oxoglutarate dehydrogenase (lipoamide), dehydrogenase (E1) component [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 920 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 9/165 (5%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E+ N+ L +++ NNQ T + + Sbjct: 332 RTKYMPILIHGDAAFAGQGVVAETLNLMNLEGYTTGGTFHIVVNNQIGFTTLPDESRSTL 391 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + F IP + V+G D AV + + Y + K II+++ YR GH+ +D Sbjct: 392 YATDLAKGFQIPIIHVNGDDPEAVYRVVKLGMEYRQKFKKDFIIDLVCYRRLGHNETDEP 451 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + T+ ++ NH P +L + EGD+++ +++ K Sbjct: 452 AF-TQPKMYATIKNHPPT----VKLYEKRLVEEGDIQQEDIDFIK 491 >gi|183220459|ref|YP_001838455.1| 2-oxoglutarate dehydrogenase E1 component [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910572|ref|YP_001962127.1| 2-oxoglutarate dehydrogenase E1 component [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775248|gb|ABZ93549.1| Oxoglutarate dehydrogenase (lipoamide), dehydrogenase (E1) component [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778881|gb|ABZ97179.1| 2-oxoglutarate dehydrogenase E1 component (Alpha-ketoglutarate dehydrogenase) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 922 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 4/147 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + V GD A A QG V E+ N+ L V +++ NNQ T S + + Sbjct: 336 RSKFMPVAIHGDAAFAGQGVVAETLNMMNLEGYTVGGTFHIVINNQIGFTTLPSESRSTL 395 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + F +P V+G D A A+ Y + K +II+++ YR GH+ +D Sbjct: 396 YATDLAKGFQVPIFHVNGDDPEAAYRVTKLALEYRQKFKKDVIIDLICYRRLGHNETDEP 455 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLH 320 ++ + + ++ + I +RLL Sbjct: 456 SFTQPQMYDIIKKHPKTISLYEQRLLQ 482 >gi|269121958|ref|YP_003310135.1| transketolase [Sebaldella termitidis ATCC 33386] gi|268615836|gb|ACZ10204.1| Transketolase domain protein [Sebaldella termitidis ATCC 33386] Length = 277 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV-IE 216 G +G VSL TGIA A K D GDG N+GQ +E+F A NLN + V ++ Sbjct: 116 GSLGQGVSLATGIAMAEKLSGKDNRVFTILGDGELNEGQCWEAFQFIAHHNLNNLTVFVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N+ + ++ + +++ +F ++V G DI + Sbjct: 176 YNKLQLDGTLEEIIKPFSLTEKFKTFGFDSVEVKGDDIEGI 216 >gi|89093478|ref|ZP_01166426.1| 1-deoxyxylulose-5-phosphate synthase [Oceanospirillum sp. MED92] gi|89082168|gb|EAR61392.1| 1-deoxyxylulose-5-phosphate synthase [Oceanospirillum sp. MED92] Length = 590 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 72/315 (22%), Positives = 129/315 (40%), Gaps = 48/315 (15%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 S+ +R AT +D V+ P + N+ +EL++ + +A LY +G G Sbjct: 4 SIPTQRPATPLLDQVNDP--ASLRTLKHNQLEELAS----------QLRAYLLYSVGQSG 51 Query: 80 GFCHLCIGQEAVIVGMKMSL-TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK 138 G +G + + + L T D ++ + GH C KI+ E I + Sbjct: 52 GHFGAGLGVIELTIALHYLLNTPKDNLV---WDVGH--QCY--PHKILTERREAMPKIRQ 104 Query: 139 GKGGSMHMFSTKNGFYG-GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 G G S ++ F G G +S G+A A+K + + V GDGA G Sbjct: 105 GDGPSPFPKREESPFDSFGVGHSSTSISAALGMAIADKLQGIESKTVAVIGDGAMTAGMA 164 Query: 198 YESFNIAALWNLNVIYVIENNQ------------YAMGTSVSRASAQTNFSK-RGVSFNI 244 +E+ N AA + N++ ++ +N Y +R++ +T + + F Sbjct: 165 FEALNHAAHTDTNLLVILNDNDMSISHNEGGLATYLAKNLKNRSAGETTAALFEALDFEY 224 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEIN 302 G VDG D + T++K + GP + ++T + +G + DP Y +I Sbjct: 225 TG-PVDGHDFNQLLPTLEKVLNT----PGPQFLHLITTKGKGFQPAEDDPVGYHAITKI- 278 Query: 303 EMRSNHDPIEQVRKR 317 +PI Q +++ Sbjct: 279 ------EPISQPKEK 287 >gi|292571776|gb|ADE29691.1| 2-oxoglutarate dehydrogenase E1 component [Rickettsia prowazekii Rp22] Length = 967 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L NV ++ + NNQ + + +RAS Sbjct: 371 KRSKIKAILVHGDAAFCGQGVVAESLSMSPLTAYNVGGILHFVINNQLGFTANAADTRAS 430 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV D AV Y + +++E++ YR GH+ Sbjct: 431 RYSTEFAK---IISAPILHVNGDDIEAVLKATDIAVEYRQKFSKDVVVEIICYRKYGHNE 487 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N ++S P Sbjct: 488 GDEPMYTQSKMYNIIKSKPTP 508 >gi|254784774|ref|YP_003072202.1| 1-deoxy-D-xylulose-5-phosphate synthase [Teredinibacter turnerae T7901] gi|237687158|gb|ACR14422.1| 1-deoxy-D-xylulose-5-phosphate synthase [Teredinibacter turnerae T7901] Length = 613 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 74/341 (21%), Positives = 135/341 (39%), Gaps = 65/341 (19%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 + +R AT +D +D P + LSA RL + + E +A LY +G GG Sbjct: 5 IPNQRPATPLLDSIDTP----------ADLRRLSAERLAQVAQ--ELRAFLLYSVGHTGG 52 Query: 81 FCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGIS 137 +G + + + L T D++I ++ + H + G + +QGGIS Sbjct: 53 HFGAGLGVVELTIALHYLLHTPEDRLIWDVGHQAYPHKILTGRREQLLTIR---QQGGIS 109 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 G S + F GH +S G+A A+ + + CV GDGA G Sbjct: 110 ---GFPKRAESVFDSFGVGHS--STSLSAALGMALASAQQGIPRQCVAVIGDGAMTAGMA 164 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSV-------------------SRASAQTN---- 234 +E+ N A +++ V+ +N ++ +V + A AQ Sbjct: 165 FEALNHAVHTQADLLVVLNDNTMSISPNVGGLASYFAGVLENSAEQAGAHAKAQVQSAPP 224 Query: 235 ----------FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 F++ G S++ P +DG D + A++ GP ++ ++T + Sbjct: 225 ASASSSASALFTELGFSYSGP---IDGHDFD----QLLPAISSVLNTSGPRLLHVVTRKG 277 Query: 285 RGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 +G + + DP Y +I ++ P ++ R + + W Sbjct: 278 KGFAPAEKDPVGYHALNKIERESASVTPDKRRRYQQVFGDW 318 >gi|296808057|ref|XP_002844367.1| 2-oxoglutarate dehydrogenase E1 component [Arthroderma otae CBS 113480] gi|238843850|gb|EEQ33512.1| 2-oxoglutarate dehydrogenase E1 component [Arthroderma otae CBS 113480] Length = 1051 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 4/166 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ AL + I+++ NNQ T A + S Sbjct: 430 VLLHGDAAFAAQGIVYETMGFHALPAYSTGGTIHIVVNNQIGFTTDPRFARSTPYCSDIA 489 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+++ YR +GH+ +D + Sbjct: 490 KAIDAPVFHVNGDDVEALNYVCQLAADWRAQFKSDVVIDIVCYRKQGHNETDQPAFTQPL 549 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + S I++ +LL K ++ D+ E + V ++N+S + Sbjct: 550 MYKRIASQQSQIDKYVDKLLKEKTFTKEDIDEHKKWVWGMLNDSFD 595 >gi|330813455|ref|YP_004357694.1| 2-oxoglutarate dehydrogenase E1 component [Candidatus Pelagibacter sp. IMCC9063] gi|327486550|gb|AEA80955.1| 2-oxoglutarate dehydrogenase E1 component [Candidatus Pelagibacter sp. IMCC9063] Length = 983 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 12/218 (5%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA---FANKYRRSDKICVVCFGDGA-ANQGQ 196 G S+H+ T N H V LG A F +R I ++ GD A A QG Sbjct: 342 GNSVHVSLTANP---SHLEAVNPVVLGQTRAKQFFHKDIKRDKVIPILLHGDAAFAGQGV 398 Query: 197 VYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 V E F ++ + N+ I++I NNQ T+ S A + S+ P V+G D Sbjct: 399 VAECFAMSGVPGHNIGGTIHIIVNNQIGFTTTPSFARSSPYPSEVAKMVQAPIFHVNGDD 458 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 + AV A Y + K ++I++ YR GH+ D ++ +++++ + Sbjct: 459 VEAVVYVTKVATEYRQKFKRDVVIDIFCYRRFGHNEGDEPSFTQPLMYQKIKNHPSILTA 518 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 K+L+ ++ +++ + + +K ++ EF +S K Sbjct: 519 YSKQLIEEGLFTKEQIEKQKSDYKKKLDK--EFEESKK 554 >gi|15604055|ref|NP_220570.1| 2-oxoglutarate dehydrogenase E1 component [Rickettsia prowazekii str. Madrid E] gi|6647694|sp|Q9ZDY3|ODO1_RICPR RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|3860746|emb|CAA14647.1| 2-OXOGLUTARATE DEHYDROGENASE E1 COMPONENT (sucA) [Rickettsia prowazekii] Length = 936 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L NV ++ + NNQ + + +RAS Sbjct: 340 KRSKIKAILVHGDAAFCGQGVVAESLSMSPLTAYNVGGILHFVINNQLGFTANAADTRAS 399 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV D AV Y + +++E++ YR GH+ Sbjct: 400 RYSTEFAK---IISAPILHVNGDDIEAVLKATDIAVEYRQKFSKDVVVEIICYRKYGHNE 456 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N ++S P Sbjct: 457 GDEPMYTQSKMYNIIKSKPTP 477 >gi|332071399|gb|EGI81893.1| transketolase, thiamine diphosphate binding domain protein [Streptococcus pneumoniae GA41301] Length = 285 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 14/152 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + R+S GDG N+GQ +E+ A+ L N+I ++ Sbjct: 120 GSLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + NF ++ +F ++V G DIR + + + + I+ Sbjct: 180 DNKKQLDGFTKDICNPGNFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIV 239 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNH 308 ++ + +G + +E+ EM+SNH Sbjct: 240 LDTI----KGQGV---------QELEEMKSNH 258 >gi|238060414|ref|ZP_04605123.1| transketolase [Micromonospora sp. ATCC 39149] gi|237882225|gb|EEP71053.1| transketolase [Micromonospora sp. ATCC 39149] Length = 918 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 22/180 (12%) Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWN-----LNVIYVIENNQYAMGTSVSRASA-- 231 D I V FGD + N +FN A ++ + V++V E+N +G SV Sbjct: 350 PDAIVVCSFGDASVNHASATAAFNTAGWYDHTGLRIPVLFVCEDN--GLGISVRSPEGWV 407 Query: 232 -QTNFSKRGVSFNIPGMQVDGMD-IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T +K G+ + DG D +RA +A + +A + R H+ P ++ + T R GH+ Sbjct: 408 EATLRAKPGIRY----FSADGTDPLRAYEAAV-EAAGWVRRHRRPAVLHLTTVRLMGHAG 462 Query: 290 SDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL----KEIEMNVRKIINNSV 344 +D YR+ EI + DP+ + L+ A+ +L E VR+I ++ Sbjct: 463 ADAETAYRSSGEI-AADLDRDPLLATARLLVEAGVATTEELLARYDERGWQVRRIAEEAL 521 >gi|321398447|emb|CAM69042.2| putative 2-oxoglutarate dehydrogenase subunit [Leishmania infantum JPCM5] gi|322500158|emb|CBZ35234.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1006 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 10/147 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV--SRASAQ-TN 234 + ++ GD A A QG YE+ L N +V ++++ NNQ T+ SRASA T+ Sbjct: 374 LPILIHGDAAFAGQGSCYETMGFCELENFHVGGTLHLVINNQIGFTTNPKDSRASAYCTD 433 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 SK N P M V+G D+ A A + + III+++ YR GH+ +D + Sbjct: 434 LSKVN---NAPVMHVNGDDVDACVKAAKIAARFRQQFHHDIIIDLVCYRRYGHNETDLPD 490 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHN 321 + + N++R + ++ K L+ + Sbjct: 491 FTQPQLYNQIRQHPSVVDIYTKTLIRD 517 >gi|88798682|ref|ZP_01114265.1| 2-oxoglutarate dehydrogenase (E1 subunit) [Reinekea sp. MED297] gi|88778445|gb|EAR09637.1| 2-oxoglutarate dehydrogenase (E1 subunit) [Reinekea sp. MED297] Length = 947 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 101/238 (42%), Gaps = 29/238 (12%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG +H+ F H + + V G+ A + RR D + V GD A A Q Sbjct: 316 GGELHL---ALAFNPSHLEIASPVVEGS--VRARQDRRKDSQGDLVVPVSIHGDAAFAGQ 370 Query: 195 GQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVD 250 G V E+F ++ A +++I NNQ TS + T + + P V+ Sbjct: 371 GVVMETFQMSQTRAYGTGGTVHIIINNQVGFTTSRQDDARSTEYCTDIAKMVQAPIFHVN 430 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSDPANYRTREEINEM 304 G D AV A Y + K ++I+++ YR RGH +M+ P Y+T + Sbjct: 431 GDDPEAVVFVTQLAADYRQQFKRDVVIDLVCYRRRGHNEADEPAMTQPMMYQT------I 484 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS-DKEPDPAELYSD 361 R + E L + S D+K+I + R + + A+S KEP+ EL+ D Sbjct: 485 RKHKTTFELYCNSLEEQGFLSRADIKQITDDYRAALESGEHVAKSLVKEPN-KELFVD 541 >gi|1763362|gb|AAB39729.1| pyruvate dehydrogenase E1-alpha- subunit [Homo sapiens] Length = 59 Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 38/59 (64%) Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTREEI E+RS DPI ++ R++++ AS +LK + K I ++ +FA +D EP Sbjct: 1 YRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKXXXVEXXKEIEDAAQFATADPEP 59 >gi|325089830|gb|EGC43140.1| 2-oxoglutarate dehydrogenase [Ajellomyces capsulatus H88] Length = 1039 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 5/181 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T A + S Sbjct: 417 VLLHGDAAFAAQGVVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRFARSTPYCSDIA 476 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+++ YR +GH+ +D ++ Sbjct: 477 KAIDAPVFHVNGDDVEALNYVCQMAADWRATFKRDVVIDIVCYRKQGHNETDQPSFTQPL 536 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 + + +++ +L+ K S+ D++E + V ++N+S + ++ D +P E Sbjct: 537 MYKRIAEQTNQLDKYVDKLISEKTFSKADIEEHKKWVWGMLNDSFDRSK-DYQPSSKEWL 595 Query: 360 S 360 + Sbjct: 596 T 596 >gi|300113085|ref|YP_003759660.1| transaldolase [Nitrosococcus watsonii C-113] gi|299539022|gb|ADJ27339.1| transaldolase [Nitrosococcus watsonii C-113] Length = 982 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 8/152 (5%) Query: 141 GGSMHMFSTKNGFYG--GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 G S+ T N + G +G ++ GIA AN+ D GDG ++G V+ Sbjct: 470 GSSLEGHPTPNNPWVKVATGSLGQGLAAANGIALANRLDDVDARIYCLLGDGECSEGSVW 529 Query: 199 ESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 E+ A+L +L N++ +++ N A FS+R SF + VDG D+ A+ Sbjct: 530 EAAQFASLNHLSNLVAIVDVNALAQSDPAPYQHDTDVFSRRFQSFGWEAITVDGHDLGAI 589 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + +++A GP I T + +G S Sbjct: 590 LSALEQA-----KKTGPTAIIAKTEKGKGVSF 616 >gi|226362257|ref|YP_002780035.1| hypothetical protein ROP_28430 [Rhodococcus opacus B4] gi|226240742|dbj|BAH51090.1| hypothetical protein [Rhodococcus opacus B4] Length = 736 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 115/287 (40%), Gaps = 39/287 (13%) Query: 98 SLTEGDQMITAYREHGHILACG--VDASKIMAE-LTGRQGGISKGKGGSMHMFSTKNGFY 154 +L D + YR G LA VD S + + L G + G H + Sbjct: 86 ALRPTDPALLHYRSGGFFLARAQQVDGSDPLRDILLGLVAATEEPISGGRHKV------F 139 Query: 155 GGHGI--------VGAQVSLGTGIAF----ANKYR-----RSDKICVVCFGDGAANQGQV 197 G H + + + + G+AF A K R +D + V FGD +AN Sbjct: 140 GRHDLNIIPQTSTIASHLPRAVGVAFSIARAAKLRVPSPWPADAVAVCSFGDASANHSTA 199 Query: 198 YESFNIAAL-----WNLNVIYVIENNQYAMGTSVSRASAQTNFSKR-GVSFNIPGMQVDG 251 + N A L ++ V E+N + T NF R G+++ + DG Sbjct: 200 VGAINTAVQSAFQGLPLPLLLVCEDNGIGISTKTPPGWIAANFGNRAGLAY----FEADG 255 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDP 310 D+ A AT +A + R ++ P + + T R GH+ SD + YRT EI + + DP Sbjct: 256 FDLPATYATATRAADWVRRNRKPAFLHLRTVRLMGHAGSDLESAYRTSAEITD-DFDRDP 314 Query: 311 IEQVRKRLLHNKWASEGD-LKEIEMNVRKIINNSVEFAQSDKEPDPA 356 + + L+ + S D L E +++ + E A+ + PA Sbjct: 315 VLCTARLLIDHGHLSPTDVLARYEDKRTEVLQLAREVAELPQLNSPA 361 >gi|13235414|emb|CAC33736.1| sucA [Rickettsia typhi] Length = 771 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L NV ++ + NNQ + + +RAS Sbjct: 341 KRSKVKAILLHGDAAFCGQGVVAESLSMSPLTAYNVGGILHFVINNQLGFTANAADTRAS 400 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV D AV Y + +++E++ YR GH+ Sbjct: 401 RYSTEFAKIIAA---PILHVNGDDIEAVLKATDIAVEYRQKFSKDVVVEIICYRKYGHNE 457 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N ++S P Sbjct: 458 GDEPMYTQSKMYNIIKSKPTP 478 >gi|327282918|ref|XP_003226189.1| PREDICTED: probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial-like [Anolis carolinensis] Length = 924 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 4/176 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + + QG V E+F I+ L + + I++I NNQ T R + S Sbjct: 331 ICLQVHGDASFSGQGIVPETFTISNLPHFRIGGSIHLIVNNQLGYTTPAERGRSSLYCSD 390 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 G + V+G D V AV Y R + +I+++L YR GH+ D + Sbjct: 391 IGKIVGCAVIHVNGDDPEEVIRAARLAVEYQRHFRKDVIVDLLCYRQWGHNELDEPFFTN 450 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +RS + +RL+ +E ++ EI+ + +N + S P Sbjct: 451 PTMYKIIRSRKSIPDTYAERLVTQGLMTEEEVSEIKTSYYSKLNEHLANMTSYTPP 506 >gi|255506628|ref|ZP_05382267.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis D(s)2923] Length = 905 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 13/180 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG-TSVSRASAQTNF- 235 + V+ GD A A QG VYE+F ++ + + ++++ NNQ MG T+ R S T + Sbjct: 318 LAVLMHGDAALAGQGVVYETFQLSGIPGYSTEGTVHIVVNNQ--MGFTAQPRESRSTPYC 375 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + IP +V+G DI A M+ A+ +II++ YR GH+ D + Sbjct: 376 TDIAKMMGIPVFRVNGEDILACLQVMEYAIHIRERFHCDVIIDLCCYRKYGHNEIDDPSV 435 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHN-KW-ASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 E++ E ++ LLH+ +W S +L+ I+ + ++N E+A S K+P Sbjct: 436 TAPFLYEEIKKKKQGSELFKEILLHHPEWNISSDELERIDTEIAHVLNQ--EYA-SLKDP 492 >gi|225559813|gb|EEH08095.1| 2-oxoglutarate dehydrogenase [Ajellomyces capsulatus G186AR] Length = 1058 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 5/181 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T A + S Sbjct: 436 VLLHGDAAFAAQGVVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRFARSTPYCSDIA 495 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+++ YR +GH+ +D ++ Sbjct: 496 KAIDAPVFHVNGDDVEALNYVCQMAADWRATFKRDVVIDIVCYRKQGHNETDQPSFTQPL 555 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 + + +++ +L+ K S+ D++E + V ++N+S + ++ D +P E Sbjct: 556 MYKRIAEQTNQLDKYVDKLISEKTFSKADIEEHKKWVWGMLNDSFDRSK-DYQPSSKEWL 614 Query: 360 S 360 + Sbjct: 615 T 615 >gi|51473380|ref|YP_067137.1| alpha-ketoglutarate decarboxylase [Rickettsia typhi str. Wilmington] gi|81390233|sp|Q68XI7|ODO1_RICTY RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|51459692|gb|AAU03655.1| Alpha-ketoglutaric dehydrogenase [Rickettsia typhi str. Wilmington] Length = 933 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L NV ++ + NNQ + + +RAS Sbjct: 341 KRSKVKAILLHGDAAFCGQGVVAESLSMSPLTAYNVGGILHFVINNQLGFTANAADTRAS 400 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV D AV Y + +++E++ YR GH+ Sbjct: 401 RYSTEFAKIIAA---PILHVNGDDIEAVLKATDIAVEYRQKFSKDVVVEIICYRKYGHNE 457 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N ++S P Sbjct: 458 GDEPMYTQSKMYNIIKSKPTP 478 >gi|282861593|ref|ZP_06270657.1| Transketolase domain protein [Streptomyces sp. ACTE] gi|282563409|gb|EFB68947.1| Transketolase domain protein [Streptomyces sp. ACTE] Length = 303 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +++GTG A A++ RSD+ C V GDG +G V+E+ ++A+ L + +++ Sbjct: 143 GSLGHGLAVGTGHALAHRLERSDRRCFVVMGDGELQEGSVWEAASVASAQRLGRLTAIVD 202 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + + A + R +F ++ DG D A+ + A Sbjct: 203 RNGLQISGATEAVGALEPLADRWRAFGWRVLEADGHDTGALTEALSLA 250 >gi|255310856|ref|ZP_05353426.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis 6276] gi|255317156|ref|ZP_05358402.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis 6276s] Length = 905 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 13/180 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG-TSVSRASAQTNF- 235 + V+ GD A A QG VYE+F ++ + + ++++ NNQ MG T+ R S T + Sbjct: 318 LAVLMHGDAALAGQGVVYETFQLSGIPGYSTEGTVHIVVNNQ--MGFTAQPRESRSTPYC 375 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + IP +V+G DI A M+ A+ +II++ YR GH+ D + Sbjct: 376 TDIAKMMGIPVFRVNGEDILACLQVMEYAIHIRERFHCDVIIDLCCYRKYGHNEIDDPSV 435 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHN-KW-ASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 E++ E ++ LLH+ +W S +L+ I+ + ++N E+A S K+P Sbjct: 436 TAPFLYEEIKKKKQGSELFKEILLHHPEWNISSDELERIDTEIAHVLNQ--EYA-SLKDP 492 >gi|325290626|ref|YP_004266807.1| transketolase subunit A [Syntrophobotulus glycolicus DSM 8271] gi|324966027|gb|ADY56806.1| transketolase subunit A [Syntrophobotulus glycolicus DSM 8271] Length = 274 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ GIA + + + SD+ GDG ++GQ +E+ AA + L NV +++ Sbjct: 120 GSLGQGLSIANGIALSCRLKGSDQRAYCMLGDGELHEGQCWEAMLTAAHFKLNNVCAIVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + S+ + + + +F+ +++DG D+ + +A Y KGP + Sbjct: 180 YNKLQLDGSLDEVKSLGDLRAKWDAFDWHTIEIDGHDLSQIYDAFAEAENY---KKGPSV 236 Query: 277 IEMLTYRYRGHSM 289 I T + +G S Sbjct: 237 IIANTIKGKGVSF 249 >gi|291546694|emb|CBL19802.1| Transketolase, N-terminal subunit [Ruminococcus sp. SR1/5] Length = 279 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 7/134 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K D GDG +GQV+E+ A L N++ +++ Sbjct: 115 GSLGQGISAAAGMALSAKLSNDDYRVYTLLGDGEIEEGQVWEAAMFAGFRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + ++ + K+ +FN + V DG D+ +KA D+A RA KG P Sbjct: 175 NNGLQIDGDIADVCSPYPIDKKFEAFNFHVINVADGNDMDQLKAAFDEA----RATKGMP 230 Query: 275 IIIEMLTYRYRGHS 288 I M T + +G S Sbjct: 231 TAIIMKTVKGKGVS 244 >gi|299743948|ref|XP_001836087.2| oxoglutarate dehydrogenase [Coprinopsis cinerea okayama7#130] gi|298405893|gb|EAU85723.2| oxoglutarate dehydrogenase [Coprinopsis cinerea okayama7#130] Length = 1005 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 4/152 (2%) Query: 184 VVCFGDGA-ANQGQVYESF---NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ N+ + I++I NNQ T + + S Sbjct: 393 VLLHGDAAFAGQGVVYETMGLHNLPSYGTGGTIHLIVNNQIGFTTDPRFSRSTPYPSDIA 452 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 S + P V+G +I AV A Y K ++I+++ YR GH+ +D ++ Sbjct: 453 KSIDAPIFHVNGDNIEAVNFVCQLAADYRAKWKKDVVIDIVCYRRYGHNETDQPSFTQPR 512 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 ++ P+ Q K L++ +E D++E Sbjct: 513 MYEAIKKQPTPLTQYAKFLVNRGTFTERDIEE 544 >gi|149194461|ref|ZP_01871558.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caminibacter mediatlanticus TB-2] gi|149135636|gb|EDM24115.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caminibacter mediatlanticus TB-2] Length = 605 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 13/165 (7%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQ-G 134 GG +G +I+GM E D I +++ + H L G + T RQ G Sbjct: 33 GGHLSSTLGAVELIIGMHYVFDVEKDPFIFDVSHQAYAHKLLTG----RWEEFETLRQFG 88 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 GIS G + S + F GH +S+ G A A K + D+I VV GDGA + Sbjct: 89 GIS---GYTRPSESKYDYFSAGHS--STSISVAVGAAKAIKLKNEDRIPVVLIGDGAMSA 143 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 G VYE+ N L V+ ++ +N+ ++G + S K G Sbjct: 144 GMVYEALNELGDLKLPVVIILNDNEMSIGRPIGAISKYLTKLKAG 188 >gi|325283964|ref|YP_004256505.1| 2-oxoglutarate dehydrogenase, E1 subunit [Deinococcus proteolyticus MRP] gi|324315773|gb|ADY26888.1| 2-oxoglutarate dehydrogenase, E1 subunit [Deinococcus proteolyticus MRP] Length = 963 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 5/120 (4%) Query: 177 RRSDKICVVCFGDGAA-NQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 RR + + + GD A QG V E+ N++ L I ++ NNQ S R S Sbjct: 344 RRDNVLAITVHGDAAVIGQGVVMETLNMSRLRGFTTGGAIRIVINNQVGFTISDPRDSRS 403 Query: 233 TNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + + N P M V+G D+ AV D A+AY + + I+++++R GH+ +D Sbjct: 404 SRYCTDVAKIANAPVMHVNGDDLEAVAFAADLALAYRQQFGKDVFIDLVSFRRHGHNEAD 463 >gi|86747404|ref|YP_483900.1| 2-oxoglutarate dehydrogenase E1 component [Rhodopseudomonas palustris HaA2] gi|86570432|gb|ABD04989.1| 2-oxoglutarate dehydrogenase E1 component [Rhodopseudomonas palustris HaA2] Length = 985 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L I+ I NNQ T + + Sbjct: 383 RVSVLPLLMHGDAAFAGQGVVAECFGLSDLKGYRTGGSIHFIVNNQIGFTTYPRYSRSSP 442 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV AV Y + P++I+M YR GH+ D Sbjct: 443 YPSDVAKMIDAPIFHVNGDDPEAVVFAAKIAVEYRQKFHKPVVIDMFCYRRHGHNEGDEP 502 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + ++ + +E KRL+ + +EG++++ + + R ++ +E A S P Sbjct: 503 AFTQPMMYRKIAGHPSALELYSKRLIADGVITEGEVEKAKADWRARLDAELE-AGSSYRP 561 Query: 354 DPAE 357 + A+ Sbjct: 562 NKAD 565 >gi|302899706|ref|XP_003048110.1| hypothetical protein NECHADRAFT_79926 [Nectria haematococca mpVI 77-13-4] gi|256729042|gb|EEU42397.1| hypothetical protein NECHADRAFT_79926 [Nectria haematococca mpVI 77-13-4] Length = 977 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 82/197 (41%), Gaps = 30/197 (15%) Query: 125 IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV--GAQVSL---------------G 167 I+AE +GR G G + +G H I G +VSL Sbjct: 285 ILAEFSGRVTADLPGMAGDVKYHLGHDG----HRITPEGHRVSLSLLANPSHLEAVDPVA 340 Query: 168 TGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENN 218 TG A+A + R DK +C+ GD A A QG VYE+ ++ L +V I +I NN Sbjct: 341 TGSAYATQKLRGDKDRTRAMCLALHGDAAFAGQGVVYETLGLSRLDGYDVGGTIRIIVNN 400 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 Q T + + S + P + V+ D+ AV A + + I+I+ Sbjct: 401 QIGFTTDAECSRSTPYASDLAKYTDSPIIHVNADDVEAVTFVCQLAADWRARFQEDIVID 460 Query: 279 MLTYRYRGHSMSDPANY 295 ++ YR GH+ D N+ Sbjct: 461 LVCYRKFGHNEFDQPNF 477 >gi|91975024|ref|YP_567683.1| 2-oxoglutarate dehydrogenase E1 component [Rhodopseudomonas palustris BisB5] gi|91681480|gb|ABE37782.1| 2-oxoglutarate dehydrogenase E1 component [Rhodopseudomonas palustris BisB5] Length = 985 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 5/180 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E F ++ L I+ I NNQ T + + S Sbjct: 387 LPLLMHGDAAFAGQGVVAECFGLSDLKGYRTGGSIHFIVNNQIGFTTYPRYSRSSPYPSD 446 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P V+G D AV AV Y + P++I+M YR GH+ D + Sbjct: 447 VAKMIDAPIFHVNGDDPEAVVFAAKIAVEYRQKFHKPVVIDMFCYRRHGHNEGDEPAFTQ 506 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 ++ + +E KRL+ + +EG++++ + + R ++ +E A S P+ A+ Sbjct: 507 PMMYRKIAGHPSALELYSKRLIADGVITEGEVEKAKADWRARLDAELE-AGSSYRPNKAD 565 >gi|255348417|ref|ZP_05380424.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis 70] gi|255502959|ref|ZP_05381349.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia trachomatis 70s] Length = 903 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 11/179 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + V+ GD A A QG VYE+F ++ + + ++++ NNQ T+ R S T + + Sbjct: 318 LAVLMHGDAALAGQGVVYETFQLSGIPGYSTEGTMHIVVNNQIGF-TAQPRESRSTPYCT 376 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 IP +V+G D+ A M+ A+ +II++ YR GH+ SD + Sbjct: 377 DIAKMMGIPVFRVNGEDVLACLQVMEYAIHIRERFHCDVIIDLCCYRKYGHNESDDPSVT 436 Query: 297 TREEINEMRSNHDPIEQVRKRLLHN-KW-ASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 E++ E ++ LLH+ +W S +L+ ++ + ++N E+A S K+P Sbjct: 437 APFLYEEIKKKKQGSELFKEILLHHPEWNISSDELERMDTEIAHVLNQ--EYA-SLKDP 492 >gi|111017836|ref|YP_700808.1| transketolase, N-terminal subunit [Rhodococcus jostii RHA1] gi|110817366|gb|ABG92650.1| transketolase, N-terminal subunit [Rhodococcus jostii RHA1] Length = 287 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 2/132 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S GTGIA + + V GDG ++GQ++E+ AA ++ N+I +++ Sbjct: 128 GSLGHALSTGTGIALGTRLQGRPSNVFVLLGDGELHEGQIWEAALGAAHHDVANLIAIVD 187 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N +++ + + + +F +VDG D+RA+ AT +A+ P + Sbjct: 188 RNDHSLDGRIDTVTNIEPLGDKWRAFGWDAYEVDGHDVRALLATF-RAIVEDPERTRPAV 246 Query: 277 IEMLTYRYRGHS 288 I T + +G S Sbjct: 247 IIANTVKGKGIS 258 >gi|110635726|ref|YP_675934.1| alpha-ketoglutarate decarboxylase [Mesorhizobium sp. BNC1] gi|110286710|gb|ABG64769.1| 2-oxoglutarate dehydrogenase E1 component [Chelativorans sp. BNC1] Length = 994 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 17/190 (8%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG V E ++ L V ++VI NNQ T+ + + Sbjct: 392 RSRVMPLLIHGDAAFAGQGVVAECLGLSGLRGHRVAGTVHVIINNQIGFTTNPRFSRSSP 451 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-- 291 S P V+G D AV A + A + P++I+M YR GH+ D Sbjct: 452 YPSDVAKMIEAPIFHVNGDDPEAVVYAAKVATEFRMAFQKPVVIDMFCYRRFGHNEGDEP 511 Query: 292 ----PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 P YRT +RS+ +E ++L+ ++ D+ ++ R + + Sbjct: 512 AFTQPIMYRT------IRSHPTTVEVYSRKLIDEGLVTKDDIDQMRAEWRATLEAEFDAG 565 Query: 348 QSDKEPDPAE 357 QS K P+ A+ Sbjct: 566 QSYK-PNKAD 574 >gi|322492905|emb|CBZ28185.1| putative 2-oxoglutarate dehydrogenase subunit [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1006 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 10/147 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV--SRASAQ-TN 234 + ++ GD A A QG YE+ L N +V ++++ NNQ T+ SRASA T+ Sbjct: 374 LPILIHGDSAFAGQGSCYETMGFCELENFHVGGTLHLVINNQIGFTTNPKDSRASAYCTD 433 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 SK N P M V+G D+ A A + + III+++ YR GH+ +D + Sbjct: 434 LSKVN---NAPVMHVNGDDVDACVKAAKIAARFRQQFHHDIIIDLVCYRRYGHNETDLPD 490 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHN 321 + + N++R + ++ K L+ + Sbjct: 491 FTQPKLYNQIRQHPSVVDIYTKTLIKD 517 >gi|259047672|ref|ZP_05738073.1| transketolase [Granulicatella adiacens ATCC 49175] gi|259035863|gb|EEW37118.1| transketolase [Granulicatella adiacens ATCC 49175] Length = 285 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/162 (21%), Positives = 72/162 (44%), Gaps = 1/162 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S TGIA+ K + + GDG N+GQ +E+ A+ LN I ++ Sbjct: 120 GSLGQGISAATGIAYGQKIKDAPYYTYTIVGDGELNEGQCWEAIQFASHHQLNRFIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + + +F ++ +F ++VDG D+ A+ +++ I+ Sbjct: 180 DNKKQLDGRTADICNPLDFVEKFKAFGFETLRVDGQDVEAIFEAIEQLKQSTLPFPKCIV 239 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 ++ + + AN+ R + + +EQ+R+ L Sbjct: 240 LDTVKGQGVKGVEQIEANHHLRPTPEQKEMLNQAVEQLREEL 281 >gi|149369617|ref|ZP_01889469.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [unidentified eubacterium SCB49] gi|149357044|gb|EDM45599.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [unidentified eubacterium SCB49] Length = 916 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 10/187 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT---N 234 + +V GD A A QG VYE +A L I+V+ NNQ T+ A + T + Sbjct: 333 VPIVVHGDAAIAGQGVVYEFVQMAQLEAYQTGGTIHVVANNQVGFTTNYLDARSSTYCTD 392 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 +K +S P + V+ D+ AV A+ Y + I++L YR GH+ D Sbjct: 393 IAKVTLS---PVLHVNADDVEAVCHAFTFALDYRMKFGRDVFIDILGYRKYGHNEGDEPR 449 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 + + + + +P + K+L+ + G +K+IE+ + + N +E ++ + + Sbjct: 450 FTQPKLYKSISKHENPRDIYAKKLVEDGVIDAGYVKKIEVAYKNDLENDLEASRKNDKTV 509 Query: 355 PAELYSD 361 E+ +D Sbjct: 510 ITEILAD 516 >gi|317056643|ref|YP_004105110.1| transketolase domain-containing protein [Ruminococcus albus 7] gi|315448912|gb|ADU22476.1| Transketolase domain-containing protein [Ruminococcus albus 7] Length = 279 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G VS+ G+A + KY+ +D GDG +GQV+E+ AA + L N++ +++ Sbjct: 117 GSLGQGVSVAAGMALSAKYQGADYKVYTVLGDGEIQEGQVWEASMFAAHYKLDNLVMIVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN + +S + + +F + ++ D D +++ ++A C P + Sbjct: 177 NNGLQIDGKISDVMSPYPIVDKFKAFGLHVVEADAHDFDSLEKAFNEAETVCGQ---PTV 233 Query: 277 IEMLTYRYRGHS-MSDPANYR 296 I M + + +G S M D ++ Sbjct: 234 IVMKSTKGKGVSFMEDNVSWH 254 >gi|170089717|ref|XP_001876081.1| 2-oxoglutarate dehydrogenase complex E1 component, mitochondrial precursor [Laccaria bicolor S238N-H82] gi|164649341|gb|EDR13583.1| 2-oxoglutarate dehydrogenase complex E1 component, mitochondrial precursor [Laccaria bicolor S238N-H82] Length = 1012 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 8/177 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAAL-W--NLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ + L W I++I NNQ T + + + S Sbjct: 393 VLLHGDAAFAGQGIVYETMGLHNLPWYGTGGTIHLIVNNQIGFTTDPRFSRSTSYPSDLA 452 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P + V+G ++ AV A Y +K ++I+++ YR GH+ +D ++ Sbjct: 453 KTIDAPILHVNGDNVEAVNFVCQLAADYRAKYKKDVVIDIVCYRRYGHNETDQPSFTQPR 512 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV----EFAQSDKE 352 + P+ Q K L+ +E D++E + V ++ + ++ S KE Sbjct: 513 MYKAIEKQPTPLTQYTKFLVGRGTFTEKDIEEHKTWVLGMLEKAAAGAKDYVPSSKE 569 >gi|110739609|dbj|BAF01713.1| 2-oxoglutarate dehydrogenase, E1 subunit - like protein [Arabidopsis thaliana] Length = 611 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 7/156 (4%) Query: 198 YESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 YE+ +++AL N I+++ NNQ A T + + + + P V+G D+ Sbjct: 3 YETLHLSALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALSAPIFHVNGDDV 62 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV + A + + ++++++ YR GH+ D ++ T+ ++ ++ NH Q+ Sbjct: 63 EAVVHACELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSF-TQPKMYKVIKNHPSTLQI 121 Query: 315 -RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 K+LL S+ D+ I+ V I+N EF S Sbjct: 122 YHKKLLECGEVSQQDIDRIQEKVNTILNE--EFVAS 155 >gi|224092774|ref|XP_002189880.1| PREDICTED: similar to probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial [Taeniopygia guttata] Length = 924 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD A + QG V E+ ++ L + V I++I NNQ T R + S Sbjct: 331 ICLQVHGDAAFSGQGIVPETLTLSNLPHFRVGGSIHLIVNNQLGYTTPPERGRSSLYCSD 390 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G D V AV Y R + +I+++L YR GH+ ++ Sbjct: 391 IGKIIGCAVIHVNGDDPEEVVRATRLAVEYQRQFRRDVIVDLLCYRQWGHNELDEPFFTN 450 Query: 292 PANY---RTREEINEMRSNH 308 P+ Y R+R+ I +M + H Sbjct: 451 PSMYKIIRSRKSIPDMYAEH 470 >gi|260907538|ref|ZP_05915860.1| alpha-ketoglutarate decarboxylase [Brevibacterium linens BL2] Length = 1253 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 14/136 (10%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N++ L I++I NNQ +G + ASA+++F Sbjct: 672 LPVLVHGDAAFAGQGVVTETLNLSELRGYRTGGTIHIIINNQ--VGFTTPPASARSSFYC 729 Query: 238 RGV--SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SM 289 V S N P V+G D AV A Y + +II+++ YR RGH SM Sbjct: 730 TDVAKSINAPIFHVNGDDPEAVVRAARLAFEYRQEFNRDVIIDLVCYRRRGHNEGDDPSM 789 Query: 290 SDPANYRTREEINEMR 305 + P Y E+ +R Sbjct: 790 TQPLMYSLIEKKGSVR 805 >gi|119868059|ref|YP_938011.1| branched-chain alpha-keto acid dehydrogenase E1 component [Mycobacterium sp. KMS] gi|119694148|gb|ABL91221.1| branched-chain alpha-keto acid dehydrogenase E1 component [Mycobacterium sp. KMS] Length = 721 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 15/176 (8%) Query: 179 SDKICVVCFGDGAANQGQVYESFNIAAL-----WNLNVIYVIENNQYAMGTSVSRASAQT 233 +D + V FGD + N + N A + +++V E+N + T R Sbjct: 176 ADAVTVCSFGDASVNHSTAVGALNTAMHTAYQGMPMPLLFVCEDNGIGISTRTPRGWVAR 235 Query: 234 NFSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 +S+R G+ + DG D+ A T A + R H+ P + + T R GH+ SD Sbjct: 236 TYSQREGLQY----FAADGSDLAATLETTRAAAEFVRTHRRPAFLHLSTVRLMGHAGSDY 291 Query: 292 -PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD-LKEIEMNVRKIINNSVE 345 P R E + + + DP+ K + S + L+ E R++++ + E Sbjct: 292 EPGYRRPDEIVADF--DRDPVLCAAKASVAQGILSPVEVLERYEATRRQVLDMAAE 345 >gi|145344821|ref|XP_001416923.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577149|gb|ABO95216.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 994 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 18/163 (11%) Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-AN 193 +GG +H+ N + + A ++ TG A ++ D + ++ GDGA + Sbjct: 327 RGGQIHLSLVANPSH-----LEAVNTVVTGKTRAKQFYTKDPNGDRSMPILLHGDGAFSG 381 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRASAQTNFSKRGVSFNIPGMQ 248 QG VYE+ +++ L +V ++++ NNQ A T SR+SA +G+ +P Sbjct: 382 QGIVYETLDMSKLPEYSVGGTLHIVVNNQVAFTTDPKYSRSSAYCTDVAKGM--EVPVFH 439 Query: 249 VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+G D+ AV M+ A + K +++++ YR GH+ D Sbjct: 440 VNGDDVEAVAWVMELATEWRMKWKTDAVVDIVCYRKYGHNEID 482 >gi|316931841|ref|YP_004106823.1| 2-oxoglutarate dehydrogenase, E1 subunit [Rhodopseudomonas palustris DX-1] gi|315599555|gb|ADU42090.1| 2-oxoglutarate dehydrogenase, E1 subunit [Rhodopseudomonas palustris DX-1] Length = 985 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 4/176 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L I+ I NNQ T + + Sbjct: 383 RVSVLPLLMHGDAAFAGQGVVAECFALSDLKGYRTGGSIHFIVNNQIGFTTYPRYSRSSP 442 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV AV Y + P++I+M YR GH+ D Sbjct: 443 YPSDVAKMIDAPIFHVNGDDPEAVVFAAKIAVEYRQKFHKPVVIDMFCYRRHGHNEGDEP 502 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 ++ ++ + +E KRL+ + +EG++++ + R ++ E A S Sbjct: 503 SFTQPLMYRKIAGHPTTLEIYSKRLIADGVITEGEVEKARADWRARLDAEFEAASS 558 >gi|261191769|ref|XP_002622292.1| 2-oxoglutarate dehydrogenase E1 component [Ajellomyces dermatitidis SLH14081] gi|239589608|gb|EEQ72251.1| 2-oxoglutarate dehydrogenase E1 component [Ajellomyces dermatitidis SLH14081] Length = 1066 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 5/181 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T A + S Sbjct: 444 VLLHGDAAFAAQGVVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRFARSTPYCSDIA 503 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+++ YR +GH+ +D ++ Sbjct: 504 KAIDAPVFHVNGDDVEALNYVCQMAADWRATFKRDVVIDIVCYRKQGHNETDQPSFTQPL 563 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 + + +++ +L+ K S+ D++E + V ++N+S + ++ D +P E Sbjct: 564 MYKRIAEQTNQLDKYVDKLIREKTFSKEDIEEHKKWVWGMLNDSFDRSK-DYQPSSKEWL 622 Query: 360 S 360 + Sbjct: 623 T 623 >gi|225859901|ref|YP_002741411.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae 70585] gi|225720143|gb|ACO15997.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae 70585] Length = 285 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 14/161 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + R+S GDG N+GQ +E+ A+ L N+I ++ Sbjct: 120 GSLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + +F ++ +F ++V G DIR + + + + I+ Sbjct: 180 DNKKQLDGFTKDICNPGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIV 239 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 ++ + +G + +E+ EM+SNH V +R Sbjct: 240 LDTI----KGQGV---------QELEEMKSNHHLRPTVEER 267 >gi|83648761|ref|YP_437196.1| 2-oxoisovalerate dehydrogenase [Hahella chejuensis KCTC 2396] gi|83636804|gb|ABC32771.1| 2-oxoisovalerate dehydrogenase [Hahella chejuensis KCTC 2396] Length = 745 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 20/204 (9%) Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWN------LNVI 212 VGA S+G D V+C FGD + N + N + W L ++ Sbjct: 159 VGAAYSIGLNRRLRLNGEMPDDAVVLCSFGDASLNHSTAQGAINTSC-WTAYQRVPLPLL 217 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM---QVDGMDIRAVKATMDKAVAYCR 269 +V E+N + + + N S+R PG+ + DG++ V AT +A + R Sbjct: 218 WVCEDNGIGISVRTPQGWVEANMSRR------PGLHYLRCDGLNFADVYATAHRAESIVR 271 Query: 270 AHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 + P + M R GH+ SD Y + +EI E DP+ + L+ + S D Sbjct: 272 KRREPAFLHMSCVRLMGHAGSDAQQAYLSMKEI-EAHEAQDPLLHSARLLIEHGILSAHD 330 Query: 329 LKEI-EMNVRKIINNSVEFAQSDK 351 + E+ + +++ + E Q K Sbjct: 331 IIELYQATTERVVKVAEEAIQRPK 354 >gi|39933266|ref|NP_945542.1| 2-oxoglutarate dehydrogenase E1 component [Rhodopseudomonas palustris CGA009] gi|192288617|ref|YP_001989222.1| 2-oxoglutarate dehydrogenase E1 component [Rhodopseudomonas palustris TIE-1] gi|39652891|emb|CAE25633.1| putative alpha-ketoglutarate dehydrogenase (E1 subunit) [Rhodopseudomonas palustris CGA009] gi|192282366|gb|ACE98746.1| 2-oxoglutarate dehydrogenase, E1 subunit [Rhodopseudomonas palustris TIE-1] Length = 985 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 4/172 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E F ++ L I+ I NNQ T + + S Sbjct: 387 LPLLMHGDAAFAGQGVVAECFALSDLKGYRTGGSIHFIVNNQIGFTTYPRYSRSSPYPSD 446 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P V+G D AV AV Y + P++I+M YR GH+ D ++ Sbjct: 447 VAKMIDAPIFHVNGDDPEAVVFAAKIAVEYRQKFHKPVVIDMFCYRRHGHNEGDEPSFTQ 506 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 ++ + +E KRL+ + +EG++++ + R ++ E A S Sbjct: 507 PLMYRKIAGHPTTLEIYSKRLIADGVITEGEVEKARADWRARLDAEFEAASS 558 >gi|239608649|gb|EEQ85636.1| 2-oxoglutarate dehydrogenase E1 component [Ajellomyces dermatitidis ER-3] gi|327353787|gb|EGE82644.1| 2-oxoglutarate dehydrogenase E1 component [Ajellomyces dermatitidis ATCC 18188] Length = 1066 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 5/181 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T A + S Sbjct: 444 VLLHGDAAFAAQGVVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRFARSTPYCSDIA 503 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+++ YR +GH+ +D ++ Sbjct: 504 KAIDAPVFHVNGDDVEALNYVCQMAADWRATFKRDVVIDIVCYRKQGHNETDQPSFTQPL 563 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 + + +++ +L+ K S+ D++E + V ++N+S + ++ D +P E Sbjct: 564 MYKRIAEQTNQLDKYVDKLIREKTFSKEDIEEHKKWVWGMLNDSFDRSK-DYQPSSKEWL 622 Query: 360 S 360 + Sbjct: 623 T 623 >gi|197302305|ref|ZP_03167364.1| hypothetical protein RUMLAC_01032 [Ruminococcus lactaris ATCC 29176] gi|197298736|gb|EDY33277.1| hypothetical protein RUMLAC_01032 [Ruminococcus lactaris ATCC 29176] Length = 278 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K +D GDG +GQV+E+ +AA L N++ +++ Sbjct: 115 GSLGQGISAAVGMAIAGKMDDADYRVYTLLGDGEIQEGQVWEASMLAASHKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + ++ ++ K+ +FN +++DG D + A +A Sbjct: 175 NNNLQIDGTIEEVNSPYPIDKKFEAFNFHVIKIDGNDFDQIDAAFKEA 222 >gi|148998074|ref|ZP_01825587.1| transketolase N-terminal subunit [Streptococcus pneumoniae SP11-BS70] gi|168576000|ref|ZP_02721905.1| transketolase, N- subunit [Streptococcus pneumoniae MLV-016] gi|307068745|ref|YP_003877711.1| transketolase, N-terminal subunit [Streptococcus pneumoniae AP200] gi|147756084|gb|EDK63127.1| transketolase N-terminal subunit [Streptococcus pneumoniae SP11-BS70] gi|183578030|gb|EDT98558.1| transketolase, N- subunit [Streptococcus pneumoniae MLV-016] gi|306410282|gb|ADM85709.1| Transketolase, N-terminal subunit [Streptococcus pneumoniae AP200] Length = 285 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 14/161 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + R+S GDG N+GQ +E+ A+ L N+I ++ Sbjct: 120 GSLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + +F ++ +F ++V G DIR + + + + I+ Sbjct: 180 DNKKQLDGFTKDICNPGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIV 239 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 ++ + +G + +E+ EM+SNH V +R Sbjct: 240 LDTI----KGQGV---------QELEEMKSNHHLRPTVEER 267 >gi|148988768|ref|ZP_01820183.1| hypothetical protein CGSSp6BS73_06818 [Streptococcus pneumoniae SP6-BS73] gi|149011990|ref|ZP_01833138.1| dihydroxy-acid dehydratase [Streptococcus pneumoniae SP19-BS75] gi|168494114|ref|ZP_02718257.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae CDC3059-06] gi|307128391|ref|YP_003880422.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae 670-6B] gi|147763945|gb|EDK70878.1| dihydroxy-acid dehydratase [Streptococcus pneumoniae SP19-BS75] gi|147925579|gb|EDK76655.1| hypothetical protein CGSSp6BS73_06818 [Streptococcus pneumoniae SP6-BS73] gi|183575854|gb|EDT96382.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae CDC3059-06] gi|306485453|gb|ADM92322.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae 670-6B] Length = 285 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 14/161 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + R+S GDG N+GQ +E+ A+ L N+I ++ Sbjct: 120 GSLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + +F ++ +F ++V G DIR + + + + I+ Sbjct: 180 DNKKQLDGFTKDICNPGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIV 239 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 ++ + +G + +E+ EM+SNH V +R Sbjct: 240 LDTI----KGQGV---------QELEEMKSNHHLRPTVEER 267 >gi|255076061|ref|XP_002501705.1| predicted protein [Micromonas sp. RCC299] gi|226516969|gb|ACO62963.1| predicted protein [Micromonas sp. RCC299] Length = 996 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 39/188 (20%), Positives = 86/188 (45%), Gaps = 5/188 (2%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 + N R + V+ GDGA + QG VYE+ +++ L + I+++ NNQ A T Sbjct: 357 YENDGNRKKHMAVLLHGDGAFSGQGIVYETLDMSQLPEYTIGGTIHIVVNNQVAFTTDPK 416 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + P V+G D+ AV M+ A + + ++++++ YR GH Sbjct: 417 YSRSSPYCTDVAKCVDAPVFHVNGDDVEAVARVMELATEWRQEFGRDVVVDIVCYRKYGH 476 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D + +++++ EQ +L+ + ++ ++ + + ++ E + Sbjct: 477 NEIDEPMFTQPLMYKKIKTHRSAHEQYCDKLVAEGTLTREEIAQMHEEILRKLDQDFEDS 536 Query: 348 QSDKEPDP 355 + D P P Sbjct: 537 K-DYRPKP 543 >gi|148984428|ref|ZP_01817716.1| dihydroxy-acid dehydratase [Streptococcus pneumoniae SP3-BS71] gi|168486234|ref|ZP_02710742.1| transketolase N- section [Streptococcus pneumoniae CDC1087-00] gi|221232840|ref|YP_002511994.1| transketolase subunit [Streptococcus pneumoniae ATCC 700669] gi|147923205|gb|EDK74319.1| dihydroxy-acid dehydratase [Streptococcus pneumoniae SP3-BS71] gi|183570661|gb|EDT91189.1| transketolase N- section [Streptococcus pneumoniae CDC1087-00] gi|220675302|emb|CAR69895.1| putative transketolase subunit [Streptococcus pneumoniae ATCC 700669] gi|301800875|emb|CBW33532.1| putative transketolase subunit [Streptococcus pneumoniae OXC141] Length = 285 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 14/161 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + R+S GDG N+GQ +E+ A+ L N+I ++ Sbjct: 120 GSLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + +F ++ +F ++V G DIR + + + + I+ Sbjct: 180 DNKKQLDGFTKDICNPGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIV 239 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 ++ + +G + +E+ EM+SNH V +R Sbjct: 240 LDTI----KGQGV---------QELEEMKSNHHLRPTVEER 267 >gi|297623140|ref|YP_003704574.1| 2-oxoglutarate dehydrogenase, E1 subunit [Truepera radiovictrix DSM 17093] gi|297164320|gb|ADI14031.1| 2-oxoglutarate dehydrogenase, E1 subunit [Truepera radiovictrix DSM 17093] Length = 924 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 4/177 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A +G V ES N++ L V ++VI NNQ T S A + Sbjct: 336 REQGLTILIHGDAAFIGEGVVQESLNLSELPGYRVGGTLHVIVNNQIGFTTGPSDARSSV 395 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S +P V+G D AV ++ A+ + R K ++I++ YR GH+ D Sbjct: 396 YASDVAKMLQVPIFHVNGEDPEAVAQVVNLALDFRREFKRDVVIDLYCYRKYGHNEGDEP 455 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 + + +R E +RLL ++ D +I R ++ + A+++ Sbjct: 456 AFTQPLLYSAIRKRKGVREGYMERLLKLGKITQEDADKIADARRDLLERELSAARAE 512 >gi|119476706|ref|ZP_01617016.1| 2-oxoglutarate dehydrogenase (E1 subunit) [marine gamma proteobacterium HTCC2143] gi|119449962|gb|EAW31198.1| 2-oxoglutarate dehydrogenase (E1 subunit) [marine gamma proteobacterium HTCC2143] Length = 966 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 29/198 (14%) Query: 118 CGVDASKIMAELTGR------------QGGIS--KGKGGSMHMFSTKNGFYGGHGIVGAQ 163 G + +++ AE GR QG S + GG +H+ F H +GA Sbjct: 297 LGKNPAELFAEFEGRAEYHGSADVKYHQGFSSTVETPGGEVHL---ALAFNPSHLEIGAP 353 Query: 164 VSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYV 214 V G+ A + RR D + ++ GD A A QG V E+F ++ A I+V Sbjct: 354 VVEGS--VRARQDRRKDSEGKKVVPIILHGDAAFAGQGVVMETFQMSQTRAYKTGGTIHV 411 Query: 215 IENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 + NNQ TS + T + + P V+G D AV AV Y + Sbjct: 412 VINNQVGFTTSEREDARSTEYCTDVAKMVQAPIFHVNGDDPEAVLLVSQMAVDYRQQFNK 471 Query: 274 PIIIEMLTYRYRGHSMSD 291 ++I+++ YR RGH+ +D Sbjct: 472 DVVIDLICYRRRGHNEAD 489 >gi|108798944|ref|YP_639141.1| branched-chain alpha-keto acid dehydrogenase E1 component [Mycobacterium sp. MCS] gi|108769363|gb|ABG08085.1| branched-chain alpha-keto acid dehydrogenase E1 component [Mycobacterium sp. MCS] Length = 687 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 15/176 (8%) Query: 179 SDKICVVCFGDGAANQGQVYESFNIAAL-----WNLNVIYVIENNQYAMGTSVSRASAQT 233 +D + V FGD + N + N A + +++V E+N + T R Sbjct: 142 ADAVTVCSFGDASVNHSTAVGALNTAMHTAYQGMPMPLLFVCEDNGIGISTRTPRGWVAR 201 Query: 234 NFSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 +S+R G+ + DG D+ A T A + R H+ P + + T R GH+ SD Sbjct: 202 TYSQREGLQY----FAADGSDLAATLETTRAAAEFVRTHRRPAFLHLSTVRLMGHAGSDY 257 Query: 292 -PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD-LKEIEMNVRKIINNSVE 345 P R E + + + DP+ K + S + L+ E R++++ + E Sbjct: 258 EPGYRRPDEIVADF--DRDPVLCAAKASVAQGILSPVEVLERYEATRRQVLDMAAE 311 >gi|311743939|ref|ZP_07717745.1| 2-oxoglutarate dehydrogenase E1 component [Aeromicrobium marinum DSM 15272] gi|311313069|gb|EFQ82980.1| 2-oxoglutarate dehydrogenase E1 component [Aeromicrobium marinum DSM 15272] Length = 1249 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 88/211 (41%), Gaps = 17/211 (8%) Query: 109 YRE-HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +RE G+I V S + G +G + G G S+ + N H V V G Sbjct: 596 FREFEGNIDPRTVQGSGDVKYHLGVEGEFTSGNGDSIKVSIAANP---SHLEVVDPVLEG 652 Query: 168 TGIAFANKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQY 220 A ++ R ++ + V+ GD A A QG V E+ N++ L I+VI NNQ Sbjct: 653 IARAKQDRLNRGEEFPVLPVLVHGDAAFAGQGVVAETLNLSLLRGYRTGGTIHVIVNNQV 712 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 TS S + + T + + P V+G D A A Y R ++I+++ Sbjct: 713 GFTTSPSASRSSTYCTDVARMISAPVFHVNGDDPEACIRVAQLAYDYRRTFNKDVVIDLI 772 Query: 281 TYRYRGH------SMSDPANYRTREEINEMR 305 YR RGH S + P Y T E +R Sbjct: 773 CYRRRGHNEGDDPSFTQPLMYDTIETKKSVR 803 >gi|159045106|ref|YP_001533900.1| putative bifunctional enzyme [Dinoroseobacter shibae DFL 12] gi|157912866|gb|ABV94299.1| putative bifunctional enzyme [Dinoroseobacter shibae DFL 12] Length = 743 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 13/165 (7%) Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVC--FGDGAANQGQVYESFNIAALW-----NLNVI 212 VGA S+ ++R D +VC FGD + N +FN A+ L ++ Sbjct: 168 VGAAYSIAPAARHKPEHRVLDPDGIVCCSFGDASVNHSTAQGAFNTASCTAYRNIPLPLL 227 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 +V E+N + T + R G+++ DG DI +A + R Sbjct: 228 FVCEDNGIGISTKTPPGWISASLGARPGITY----FHADGRDIYETFRVAREAAHHVRNK 283 Query: 272 KGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVR 315 + P I+ + T R GH+ +D P +Y R E+ ++ + VR Sbjct: 284 RRPAILHLETIRLYGHAGADVPTSYLPRAEVEAAEADDPLLHMVR 328 >gi|298208669|ref|YP_003716848.1| (pyruvate) Oxoisovalerate Dehydrogenase Alpha and Beta Fusion [Croceibacter atlanticus HTCC2559] gi|83848592|gb|EAP86461.1| (pyruvate) Oxoisovalerate Dehydrogenase Alpha and Beta Fusion [Croceibacter atlanticus HTCC2559] Length = 801 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 70/304 (23%), Positives = 120/304 (39%), Gaps = 41/304 (13%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACG-VDASKIMAEL------------TGRQ 133 G+E + + + GD YR+ ++A G ++ + A L GRQ Sbjct: 54 GKEVPQLALAKAFKNGDFRSGYYRDQTFMMAIGALNIQQFFAGLYANTDLEKEPMSAGRQ 113 Query: 134 GG-----ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK-YRRSDKICVVCF 187 G S K GS + Q+ G+A A+K YR D I F Sbjct: 114 MGGHFATHSLNKDGSWKNLMQQKNSSADISPTAGQMPRLLGLAQASKIYRHVDGIDAEKF 173 Query: 188 ------------GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 G+ + ++G +E+ N A + + ++ + +++Y + + + N Sbjct: 174 SDKGNEIAWGTIGNASTSEGLFWETINAAGVLQVPMVMSVWDDEYGISVHARHQTTKENI 233 Query: 236 SKRGVSFN-------IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM--LTYRYRG 286 S F M V G D A+ T KA A R P++I + LT + +G Sbjct: 234 STILSGFQRDDEHKGFEIMVVKGWDYAALVDTYQKASALAREKHVPVLIHVNQLT-QPQG 292 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS S E+ +D Q+R+ ++ N A+E L EIE +++K + + + Sbjct: 293 HSTSGSHERYKSEDRLAWEKEYDCNVQMRQWMITNNIATEEQLSEIEKDIKKQVRDGKKA 352 Query: 347 AQSD 350 A SD Sbjct: 353 AWSD 356 >gi|149437025|ref|XP_001515774.1| PREDICTED: similar to dehydrogenase E1 and transketolase domain containing 1 [Ornithorhynchus anatinus] Length = 1004 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + V I++I NNQ T R + S Sbjct: 412 ICLQVHGDASFCGQGIVPETFTLSNLPHFRVGGSIHLIVNNQLGYTTPAERGRSSLYSSD 471 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G D V AV Y R + +I+++L YR GH+ ++ Sbjct: 472 IGKIVGCAIIHVNGDDPEEVVRATRLAVEYQRQFRKDVIVDLLCYRQWGHNELDEPFFTN 531 Query: 292 PANY---RTREEINEMRSNH 308 PA Y R+R+ I + + H Sbjct: 532 PAMYKIIRSRKSIPDTYAEH 551 >gi|182680505|ref|YP_001834651.1| 2-oxoglutarate dehydrogenase E1 component [Beijerinckia indica subsp. indica ATCC 9039] gi|182636388|gb|ACB97162.1| 2-oxoglutarate dehydrogenase, E1 subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 1006 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG + E F ++ L ++ I NNQ T + + Sbjct: 403 RNQILPLLIHGDAAFAGQGVIAECFGLSGLKGHRTGGSVHFIINNQIGFTTYPRFSRSSP 462 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P + V+G D AV A+ + + P++I+M YR GH+ D Sbjct: 463 YPSDVAKMIEAPIIHVNGDDPEAVVYAAKIAIEFRQKFHKPVVIDMFCYRRFGHNEGDEP 522 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + E+RS+ +E +L+ ++G++++++ + R+ + E Q+ K P Sbjct: 523 GFTQPVMYKEIRSHKTTLELYAGKLIAEGLVTDGEVEKLKNDWRQRLEAEFEAGQAYK-P 581 Query: 354 DPAE 357 + A+ Sbjct: 582 NKAD 585 >gi|315604850|ref|ZP_07879908.1| 2-oxoglutarate dehydrogenase E1 component [Actinomyces sp. oral taxon 180 str. F0310] gi|315313389|gb|EFU61448.1| 2-oxoglutarate dehydrogenase E1 component [Actinomyces sp. oral taxon 180 str. F0310] Length = 1297 Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 I ++ GD A QG V E+FN++ L I+++ NNQ T ++ + + Sbjct: 691 IPILIHGDAAFIGQGVVQETFNLSQLEGYKTGGTIHIVVNNQIGFTTGPTQGRSTGYATD 750 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 +P + V+ D AV A Y A +II+ML YR RGH SM+ Sbjct: 751 LAKGLQVPILHVNADDPEAVIRCAHLAFEYRNAFHKDVIIDMLCYRRRGHNEGDDPSMTQ 810 Query: 292 PANYRTREEINEMRS 306 P Y + I R+ Sbjct: 811 PVMYSLIDRIPSTRA 825 >gi|317506196|ref|ZP_07964017.1| oxoglutarate dehydrogenase [Segniliparus rugosus ATCC BAA-974] gi|316255541|gb|EFV14790.1| oxoglutarate dehydrogenase [Segniliparus rugosus ATCC BAA-974] Length = 1129 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 10/137 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GDGA A QG V E+ N++ L N+ ++++ NNQ A TS + + Sbjct: 544 MALALHGDGAFAGQGVVAETLNMSGLTGYNIGGTVHIVVNNQIAFTTSPDEGRSSVYCTD 603 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 + P V+G D A AV + ++I+++ YR RGH SM+ Sbjct: 604 VAKTIGAPVFHVNGDDPEAAVWVAQLAVDFRERFHRDVVIDLICYRQRGHNEGDDPSMTQ 663 Query: 292 PANYRTREEINEMRSNH 308 P Y E +R ++ Sbjct: 664 PTMYDVIENKRSVRKSY 680 >gi|149245522|ref|XP_001527238.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] gi|146449632|gb|EDK43888.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] Length = 1014 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 5/180 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESF---NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG VYE+ N+ A I+VI NNQ T A + S Sbjct: 405 MSVLLHGDAAFAAQGVVYETMGFANLPAYSTGGTIHVIVNNQIGFTTDPRFARSTLYPSD 464 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 S N P V+ D+ A + A + + +II+++ YR GH+ +D + Sbjct: 465 IAKSINAPIFHVNADDVEACTFVFNLAAEWRATYHTDVIIDVVGYRKHGHNETDQPAFTQ 524 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 E+ I+ K+L+ + D++E + V I+ S A+ D EP E Sbjct: 525 PLMYQEISKKKSVIDIYAKQLIDEGTFTAEDIEEHKKWVWNILEESFSKAK-DYEPTSRE 583 >gi|289167015|ref|YP_003445282.1| transketolase n-terminal section [Streptococcus mitis B6] gi|288906580|emb|CBJ21413.1| transketolase n-terminal section [Streptococcus mitis B6] Length = 285 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 14/161 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ K R+S GDG N+GQ +E+ A+ L N++ ++ Sbjct: 120 GSLGQGISVATGLAYGQKIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLMVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + +F ++ +F ++V+G DIR + + + + I+ Sbjct: 180 DNKKQLDGFTKDICNPGDFVEKFSAFGFESIRVNGSDIREIYEGIIQLKQSNNSSPKCIV 239 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 ++ + +G + E+ EM+SNH V +R Sbjct: 240 LDTI----KGQGV---------RELEEMKSNHHLRPTVEER 267 >gi|297183587|gb|ADI19714.1| hypothetical protein [uncultured bacterium EB000_36F02] Length = 958 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 63/295 (21%), Positives = 121/295 (41%), Gaps = 30/295 (10%) Query: 87 GQEAVIVGMKMSLTEGDQMIT-------AYREHGHILACGVDAS--KIMAELTGRQGGIS 137 G E++I ++ + G Q+ ++R ++LA + S +I E G Sbjct: 240 GAESLIPALEQIIKRGGQLKIKEVKIGMSHRGRVNVLANLLQKSYKRIFNEFVGEFASTP 299 Query: 138 KGKGGSM--HMFSTKNGFYGGHGI------------VGAQVSLGTGIA---FANKYRRSD 180 + G + H+ ++ N +GG+ + V LG A F +R+ Sbjct: 300 EESAGDVKYHLGASSNREFGGNWVHISLTDNPSHLEAVNPVVLGQTRAKQFFHQDAKRNK 359 Query: 181 KICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFS 236 I ++ GD A A QG V E F ++ L N I++I NNQ TS A + S Sbjct: 360 VIPILIHGDAAFAGQGIVAECFAMSGLKGHNTGGTIHIIVNNQIGFTTSPRFARSSPYPS 419 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 G P + +G D AV A+ + + ++I+M+ YR GH+ D ++ Sbjct: 420 DLGKVIESPILHCNGDDPEAVVHCAKIAIEFRQKFNKDVVIDMICYRRFGHNEGDEPSFT 479 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 ++R + + +L+ ++ + +++ + ++N + A+ K Sbjct: 480 QPLMYKKIRHHPTTLNVYANKLIKENVITQEEFDKMKKEFKNLLNEQFKTAKDYK 534 >gi|291548740|emb|CBL25002.1| Transketolase, N-terminal subunit [Ruminococcus torques L2-14] Length = 278 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K +D GDG +GQV+E+ +AA L N++ +++ Sbjct: 115 GSLGQGISAAVGMAIAGKLDNADYRVYTLLGDGEIQEGQVWEASMLAAHRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + +++ ++ K+ +FN + +DG D + A +A Sbjct: 175 NNNLQIDGAITEVNSPYPIDKKFEAFNFHVINIDGNDFDQIDAAFKEA 222 >gi|254501476|ref|ZP_05113627.1| 2-oxoglutarate dehydrogenase, E1 component [Labrenzia alexandrii DFL-11] gi|222437547|gb|EEE44226.1| 2-oxoglutarate dehydrogenase, E1 component [Labrenzia alexandrii DFL-11] Length = 995 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG V E F ++AL I+VI NNQ T+ + + Sbjct: 392 RSSVLPLLLHGDAAFAGQGVVAECFGLSALRGHRTGGSIHVIINNQIGFTTNPRFSRSSP 451 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+ D AV A+ Y + P++I+M+ YR GH+ D Sbjct: 452 YPSDMAKVIESPIFHVNADDPEAVVFAAKIAIEYRQTFGRPVVIDMICYRRFGHNEGDEP 511 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + ++R + ++ RL+ S+ D+ ++ R ++ + Q+ K P Sbjct: 512 AFTQPIMYRKIRKHQTTLQLYSDRLIKEGVMSQADVDRMKAEWRSHLDTEFDSGQAFK-P 570 Query: 354 DPAE 357 + A+ Sbjct: 571 NKAD 574 >gi|332188902|ref|ZP_08390606.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Sphingomonas sp. S17] gi|332011062|gb|EGI53163.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Sphingomonas sp. S17] Length = 993 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 13/187 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V+E + + N ++ I NNQ TS A + S Sbjct: 377 VPVLIHGDAAFAGQGIVWECLGFSGIRGYNTGGCVHFIINNQVGFTTSPQFARSSPYPSD 436 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 P V+G D AV A+ + + I+I+M YR GH+ D + Sbjct: 437 VAKGVQAPVFHVNGDDPEAVTFATKMAIEFRQKFHRDIVIDMWCYRRFGHNEGDEPGFTQ 496 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEG--DLKEIEMNVRKIINN-SVEF-AQSDKEP 353 N++RS+ E KRL+ +EG D ++ N+++ I EF A + +P Sbjct: 497 PLMYNKIRSHPGVAETYAKRLV-----AEGVVDQAWVDENIKQYITRCEGEFEAGASYKP 551 Query: 354 DPAELYS 360 + A+ ++ Sbjct: 552 NKADWFA 558 >gi|326911145|ref|XP_003201922.1| PREDICTED: probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial-like [Meleagris gallopavo] Length = 907 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GDGA + QG V E+ ++ L + V I++I NNQ T R + S Sbjct: 314 ICLQVHGDGAFSGQGIVPETLTLSNLPHFRVGGSIHLIVNNQLGYTTPPERGRSSLYCSD 373 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G D V AV Y R + +I+++L YR GH+ ++ Sbjct: 374 IGKIVGCAVIHVNGDDPEEVVRATRLAVEYQRQFRRDVIVDLLCYRQWGHNELDEPFFTN 433 Query: 292 PANY---RTREEINEMRSNH 308 P+ Y R+R+ I + + H Sbjct: 434 PSMYKIIRSRKSIPDTYAEH 453 >gi|164661599|ref|XP_001731922.1| hypothetical protein MGL_1190 [Malassezia globosa CBS 7966] gi|159105823|gb|EDP44708.1| hypothetical protein MGL_1190 [Malassezia globosa CBS 7966] Length = 1023 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 19/202 (9%) Query: 180 DKICVVCFGDGA-ANQGQVYES---FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + + ++ GD A A QG VYE+ +N+ I+++ NNQ T A + Sbjct: 393 NSMALLMHGDAAFAGQGVVYETMGMYNLPKYATGGTIHIVVNNQIGFTTDPRFARSTPYP 452 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 S + + P V+G D+ AV AV + K ++I+++ YR GH+ D + Sbjct: 453 SDIAKAIDAPIFHVNGDDVEAVNFVCQLAVEWRHQFKKDVVIDLVCYRRHGHNEIDQPAF 512 Query: 296 RTREEINEMRSNHDP-IEQVRKRLLHN----KWASEGDLKEIEMNVRKIINNSVEFAQSD 350 T+ + + S P ++Q RL+ K EG L+ I + + S F + Sbjct: 513 -TQPRMYKAISQQKPTLQQYIDRLVEEGSLGKKEVEGHLQWIWEMLTEAFEKSKSFVPEE 571 Query: 351 KE---------PDPAELYSDIL 363 ++ P P E+ IL Sbjct: 572 RQWLSSAWEGFPSPTEMQEKIL 593 >gi|149020039|ref|ZP_01835013.1| dihydroxy-acid dehydratase [Streptococcus pneumoniae SP23-BS72] gi|147930717|gb|EDK81698.1| dihydroxy-acid dehydratase [Streptococcus pneumoniae SP23-BS72] Length = 285 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 14/152 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + R+S GDG N+GQ +E+ A+ L N+I ++ Sbjct: 120 GSLGQGISVATGLAYGQRIRKSPFYTYAVVGDGELNEGQCWEAIQFASHQQLSNLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + +F ++ +F ++V G DIR + + + + I+ Sbjct: 180 DNKKQLDGFTKDICNPGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIV 239 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNH 308 ++ + +G + +E+ EM+SNH Sbjct: 240 LDTI----KGQGV---------QELEEMKSNH 258 >gi|108805327|ref|YP_645264.1| 2-oxoglutarate dehydrogenase E1 component [Rubrobacter xylanophilus DSM 9941] gi|108766570|gb|ABG05452.1| 2-oxoglutarate dehydrogenase E1 component [Rubrobacter xylanophilus DSM 9941] Length = 946 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 6/156 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + +V GD A +G E+ N+ L V I++I NNQ T A + T S Sbjct: 346 LSIVLHGDAAFPGEGVAAETLNLYRLPGYRVGGTIHIITNNQLGFTTEKEDARSTTYASD 405 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + IP + V+ D A A + A AY + +I+++ YR GH+ D Y T Sbjct: 406 LAKGYEIPVVHVNADDPEACLAAVSLAYAYRQRFHKDFMIDLIGYRRYGHNEGDEPVY-T 464 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWA-SEGDLKEI 332 + + E NH + ++ R L + SEG+ +++ Sbjct: 465 QPVMYEKIRNHPTVREIWARTLEERGVISEGEAEKM 500 >gi|329897265|ref|ZP_08272003.1| 2-oxoglutarate dehydrogenase E1 component [gamma proteobacterium IMCC3088] gi|328921261|gb|EGG28657.1| 2-oxoglutarate dehydrogenase E1 component [gamma proteobacterium IMCC3088] Length = 948 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 82/197 (41%), Gaps = 29/197 (14%) Query: 119 GVDASKIMAELTGRQGGISKG--------------KGGSMHMFSTKNGFYGGHGIVGAQV 164 G S++ AE GR S G GG +H+ F H + + V Sbjct: 282 GKKPSELFAEFEGRASYQSSGDVKYHQGFSSNIMTPGGELHL---ALAFNPSHLEIVSPV 338 Query: 165 SLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVI 215 G+ A + RR DK + +V GD A A QG V E+F ++ A I+++ Sbjct: 339 VEGS--VRARQDRRDDKTGSMVVPIVIHGDAAFAGQGVVMETFQMSQTRAYKTGGTIHIV 396 Query: 216 ENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 NNQ TS+ + T + + P V+G D AV AV Y Sbjct: 397 LNNQVGFTTSLREDARSTEYCTDIAKMVQAPIFHVNGDDPEAVLFVTQMAVDYRNEFGKD 456 Query: 275 IIIEMLTYRYRGHSMSD 291 ++I+++ YR RGH+ +D Sbjct: 457 VVIDLVCYRRRGHNEAD 473 >gi|326799097|ref|YP_004316916.1| 2-oxoglutarate dehydrogenase, E1 subunit [Sphingobacterium sp. 21] gi|326549861|gb|ADZ78246.1| 2-oxoglutarate dehydrogenase, E1 subunit [Sphingobacterium sp. 21] Length = 937 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 4/166 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYE ++ L + I+++ NNQ T+ A + T + Sbjct: 334 ILIHGDAAIAGQGIVYEVAQMSKLDGYSTGGTIHLVINNQIGFTTNFKDARSSTYCTDLA 393 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 P V+G D+ A+ ++ AV Y + + + I++L YR GH+ +D + + Sbjct: 394 KVTLSPVFHVNGDDVEALIFAINMAVEYRQRYHTDVYIDVLCYRRYGHNEADEPKFTQPK 453 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + S+ +P E K+L+ KE+E + + ++ ++ Sbjct: 454 LYKAIASHPNPREIYNKKLMEQGSVDANLAKEMEKDFKALLQQRLD 499 >gi|290982219|ref|XP_002673828.1| oxoglutarate dehydrogenase [Naegleria gruberi] gi|284087414|gb|EFC41084.1| oxoglutarate dehydrogenase [Naegleria gruberi] Length = 949 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 5/120 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S+ C++ GD + A QG V E+F ++ L I++I NNQ TS + + + Sbjct: 331 SNAACILMHGDASFAGQGIVAETFTLSRLPLFRTGGTIHIILNNQIGFTTSPTLSRSTRY 390 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 G P + V+ D+ AVK M + Y II+E++ YR GH+ + +PA Sbjct: 391 SGDVGKMVGCPILAVNAEDVEAVKKVMSISAKYRNKFAKDIIVELVGYRRHGHNELDEPA 450 >gi|189346887|ref|YP_001943416.1| 2-oxoglutarate dehydrogenase E1 component [Chlorobium limicola DSM 245] gi|189341034|gb|ACD90437.1| 2-oxoglutarate dehydrogenase, E1 subunit [Chlorobium limicola DSM 245] Length = 943 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RRSD+ + ++ GD A A QG + E+ N+A ++++ NNQ Sbjct: 336 GAVKARQVRRSDRDGSQVLPILVHGDAAFAGQGVIMETLNLALTRGYGTGGTVHIVINNQ 395 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P + V+G D AV A+ Y +A K ++I+ Sbjct: 396 IGFTTSDPRDSRSTTYCTDVVKMIEAPVLHVNGDDPEAVVLAAQMALDYRQAFKRDVVID 455 Query: 279 MLTYRYRGHSMSD 291 ++ +R GH+ D Sbjct: 456 IICFRKLGHNEQD 468 >gi|111657378|ref|ZP_01408134.1| hypothetical protein SpneT_02001408 [Streptococcus pneumoniae TIGR4] Length = 260 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 14/152 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + R+S GDG N+GQ +E+ A+ L N+I ++ Sbjct: 95 GSLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVD 154 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + +F ++ +F ++V G DIR + + + + I+ Sbjct: 155 DNKKQLDGFTKDICNPGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIV 214 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNH 308 ++ + +G + +E+ EM+SNH Sbjct: 215 LDTI----KGQGV---------QELEEMKSNH 233 >gi|168491658|ref|ZP_02715801.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae CDC0288-04] gi|183573980|gb|EDT94508.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae CDC0288-04] Length = 285 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 14/161 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + R+S GDG N+GQ +E+ A+ L N+I ++ Sbjct: 120 GSLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + +F ++ +F +++ G DIR + + + + I+ Sbjct: 180 DNKKQLDGFTKDICNPGDFVEKFSAFGFESIRIKGSDIREIYEGIVQLKQSNNSSPKCIV 239 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 ++ + +G + +E+ EM+SNH V +R Sbjct: 240 LDTI----KGQGV---------QELEEMKSNHHLRPTVEER 267 >gi|332071204|gb|EGI81699.1| transketolase, thiamine diphosphate binding domain protein [Streptococcus pneumoniae GA17545] gi|332198945|gb|EGJ13026.1| transketolase, thiamine diphosphate binding domain protein [Streptococcus pneumoniae GA47901] Length = 285 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 14/152 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + R+S GDG N+GQ +E+ A+ L N+I ++ Sbjct: 120 GSLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + +F ++ +F ++V G DIR + + + + I+ Sbjct: 180 DNKKQLDGFTKDICNPGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIV 239 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNH 308 ++ + +G + +E+ EM+SNH Sbjct: 240 LDTI----KGQGV---------QELEEMKSNH 258 >gi|189501770|ref|YP_001957487.1| hypothetical protein Aasi_0324 [Candidatus Amoebophilus asiaticus 5a2] gi|189497211|gb|ACE05758.1| hypothetical protein Aasi_0324 [Candidatus Amoebophilus asiaticus 5a2] Length = 792 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 65/302 (21%), Positives = 120/302 (39%), Gaps = 42/302 (13%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMH 145 G+E + M GD YR+ +LA G + + A+L + G Sbjct: 42 GKEVAQLAMAKVFQAGDIRSGYYRDQTFMLAIGELTIQQYFAQLYAHASITADPASGGRM 101 Query: 146 MFS-------TKNGFY----------GGHGIVGAQVSLGTGIAFANKYRRSD-------- 180 M S +NG + G GAQ+ G+A+A+K R++ Sbjct: 102 MNSHFGNRMLDENGNWKKLVSLKNSAGDLSPTGAQMPRLVGLAYASKLYRNNPLLANLTD 161 Query: 181 ------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG-------TSVS 227 +I G+ + ++G +E+ N A + + ++ + ++ Y + T S Sbjct: 162 FSNNGNEIAFGTIGNASTSEGMFFEAINAAGVLQIPMLVSVWDDDYGISVPQNYHTTKHS 221 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY-RYRG 286 + A F + + V G D +AV T +A CR P+II + + +G Sbjct: 222 ISQALAGFQRTEQETGLEIFTVKGWDYQAVCETYQRAADLCRTQHVPVIIHVQEMTQPQG 281 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HS S Y++ E + + +D +++R+ LL N A+ L IE ++ + + + Sbjct: 282 HSTSGSHERYKSAERLM-WEAEYDCNKKMREWLLVNNLATASQLDTIEKEAKETVKSQKD 340 Query: 346 FA 347 A Sbjct: 341 AA 342 >gi|149002966|ref|ZP_01827877.1| dihydroxy-acid dehydratase [Streptococcus pneumoniae SP14-BS69] gi|168484045|ref|ZP_02708997.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae CDC1873-00] gi|225855620|ref|YP_002737132.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae JJA] gi|225861947|ref|YP_002743456.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae Taiwan19F-14] gi|237649518|ref|ZP_04523770.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae CCRI 1974] gi|237822703|ref|ZP_04598548.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae CCRI 1974M2] gi|298230058|ref|ZP_06963739.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254096|ref|ZP_06977682.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae str. Canada MDR_19A] gi|298501632|ref|YP_003723572.1| transketolase [Streptococcus pneumoniae TCH8431/19A] gi|147758969|gb|EDK65964.1| dihydroxy-acid dehydratase [Streptococcus pneumoniae SP14-BS69] gi|172042663|gb|EDT50709.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae CDC1873-00] gi|225723968|gb|ACO19821.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae JJA] gi|225727108|gb|ACO22959.1| transketolase, thiamine disphosphate-binding subunit [Streptococcus pneumoniae Taiwan19F-14] gi|298237227|gb|ADI68358.1| transketolase [Streptococcus pneumoniae TCH8431/19A] gi|327388867|gb|EGE87215.1| transketolase, thiamine diphosphate binding domain protein [Streptococcus pneumoniae GA04375] gi|332198550|gb|EGJ12633.1| transketolase, thiamine diphosphate binding domain protein [Streptococcus pneumoniae GA41317] Length = 285 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 14/152 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + R+S GDG N+GQ +E+ A+ L N+I ++ Sbjct: 120 GSLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + +F ++ +F ++V G DIR + + + + I+ Sbjct: 180 DNKKQLDGFTKDICNPGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIV 239 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNH 308 ++ + +G + +E+ EM+SNH Sbjct: 240 LDTI----KGQGV---------QELEEMKSNH 258 >gi|302812353|ref|XP_002987864.1| hypothetical protein SELMODRAFT_426604 [Selaginella moellendorffii] gi|300144483|gb|EFJ11167.1| hypothetical protein SELMODRAFT_426604 [Selaginella moellendorffii] Length = 305 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 33/50 (66%) Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFST 149 +GD + + YR H H L+ GV A ++M+EL G+ +G+GGS+HMFS Sbjct: 95 AQGDYICSTYRNHVHALSKGVPARQVMSELFGKSTSCCRGQGGSLHMFSA 144 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 12/117 (10%) Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMR 305 G+ VDGMD+ V +A+A R +T R H S E Sbjct: 156 GVHVDGMDVLKVGEVAKEAIARAR---------RVTAR---HYWSLNFGLSFCPEQKSKY 203 Query: 306 SNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 DPI +K LL + ASE +LK IE + +I+ ++VEFA P ++L ++ Sbjct: 204 DACDPIAPFKKYLLEERLASEAELKAIEKKIEEIVEDAVEFADVSLLPAHSQLLENV 260 >gi|262277900|ref|ZP_06055693.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [alpha proteobacterium HIMB114] gi|262225003|gb|EEY75462.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [alpha proteobacterium HIMB114] Length = 977 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 21/249 (8%) Query: 124 KIMAELTGRQGGISKGKGGSM--HMFSTKNGFYGG------------HGIVGAQVSLGTG 169 KI E G G S G G + H+ ++ N + G H V LG Sbjct: 304 KIFKEFAGDPGIASGGVSGDVKYHLGASANREFDGNLVHVSLTANPSHLEAVNPVVLGQT 363 Query: 170 IAFANKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAM 222 A + ++ D+ I ++ GD A A QG V E F ++ L N+ I++I NNQ Sbjct: 364 RAKQDFHKDKDRKRVIPILLHGDAAFAGQGIVAECFAMSGLTGHNIGGTIHIIVNNQIGF 423 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T + + S+ P V+G D AV A Y + ++I++ Y Sbjct: 424 TTQPEFSRSSPYPSEVAKMVQAPIFHVNGDDPEAVTYCAKIATEYRQKFNRDVVIDIFCY 483 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH+ D ++ +++ + + + K+L+ SE K N +KI++ Sbjct: 484 RKFGHNEGDEPSFTQPLMYKKIKKHESTLSKYSKQLIDEGSISEEYFKNELANYQKILDE 543 Query: 343 SVEFAQSDK 351 E +++ K Sbjct: 544 EFEASKNYK 552 >gi|169834105|ref|YP_001695489.1| transketolase [Streptococcus pneumoniae Hungary19A-6] gi|225857702|ref|YP_002739213.1| transketolase [Streptococcus pneumoniae P1031] gi|168996607|gb|ACA37219.1| transketolase [Streptococcus pneumoniae Hungary19A-6] gi|225725550|gb|ACO21402.1| transketolase [Streptococcus pneumoniae P1031] Length = 285 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 14/152 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + R+S GDG N+GQ +E+ A+ L N+I ++ Sbjct: 120 GSLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + +F ++ +F ++V G DIR + + + + I+ Sbjct: 180 DNKKQLDGFTKDICNSGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIV 239 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNH 308 ++ + +G + +E+ EM+SNH Sbjct: 240 LDTI----KGQGV---------QELEEMKSNH 258 >gi|15901942|ref|NP_346546.1| transketolase, N-terminal subunit [Streptococcus pneumoniae TIGR4] gi|15903978|ref|NP_359528.1| putative transketolase n-terminal section [Streptococcus pneumoniae R6] gi|116515337|ref|YP_817346.1| transketolase N-terminal subunit [Streptococcus pneumoniae D39] gi|14973640|gb|AAK76186.1| transketolase, N-terminal subunit [Streptococcus pneumoniae TIGR4] gi|15459635|gb|AAL00739.1| Putative transketolase n-terminal section [Streptococcus pneumoniae R6] gi|116075913|gb|ABJ53633.1| transketolase N-terminal subunit [Streptococcus pneumoniae D39] gi|301795052|emb|CBW37518.1| putative transketolase subunit [Streptococcus pneumoniae INV104] Length = 285 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 14/152 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + R+S GDG N+GQ +E+ A+ L N+I ++ Sbjct: 120 GSLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + +F ++ +F ++V G DIR + + + + I+ Sbjct: 180 DNKKQLDGFTKDICNPGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIV 239 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNH 308 ++ + +G + +E+ EM+SNH Sbjct: 240 LDTI----KGQGV---------QELEEMKSNH 258 >gi|90421715|ref|YP_530085.1| 2-oxoglutarate dehydrogenase E1 component [Rhodopseudomonas palustris BisB18] gi|90103729|gb|ABD85766.1| 2-oxoglutarate dehydrogenase E1 component [Rhodopseudomonas palustris BisB18] Length = 991 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 23/201 (11%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L I+ I NNQ T + + Sbjct: 389 RVSVLPLLMHGDAAFAGQGVVAECFGLSDLKGYRTGGSIHFIVNNQIGFTTYPRYSRSSP 448 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV AV + + P++I+M YR GH+ D Sbjct: 449 YPSDVAKMIDAPIFHVNGDDPEAVVFAAKIAVEFRQKFHKPVVIDMFCYRRHGHNEGDEP 508 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE-------- 345 + ++ ++ +E KRL+ + +EG++++ + + R ++ +E Sbjct: 509 AFTQPAMYRKIAAHPSTLEIYSKRLVADGVITEGEIEKAKADWRARLDAELEAGTGYRPN 568 Query: 346 -----------FAQSDKEPDP 355 F +D+E DP Sbjct: 569 KADWLDGKWAGFKTADQEEDP 589 >gi|323142788|ref|ZP_08077501.1| Transketolase, thiamine diphosphate binding domain protein [Succinatimonas hippei YIT 12066] gi|322417433|gb|EFY08054.1| Transketolase, thiamine diphosphate binding domain protein [Succinatimonas hippei YIT 12066] Length = 269 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S GIA K ++ D GDG ++GQV+E+ AA + L N+ +++ Sbjct: 114 GSLGQGISAACGIAMGAKLKKEDFHVYAILGDGELDEGQVWEALMFAAHYKLDNLTVIVD 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + S N R +F + +++DG ++ V+ +++A R KG P Sbjct: 174 HNGLQIDGPNSEVMDLANLKARFDAFGLNTIEIDGNNLNEVR----QSLALAREVKGKPT 229 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 230 LILANTVKGKGVSF 243 >gi|325104697|ref|YP_004274351.1| Transketolase domain-containing protein [Pedobacter saltans DSM 12145] gi|324973545|gb|ADY52529.1| Transketolase domain-containing protein [Pedobacter saltans DSM 12145] Length = 803 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 64/300 (21%), Positives = 124/300 (41%), Gaps = 42/300 (14%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASK-IMAELT------------GRQ 133 G+E V M + GD YR+ + A G+ K A+L GRQ Sbjct: 57 GKEIAQVAMSKAFKNGDWRSGYYRDQTVMFATGMATVKQFFAQLYAHPDLDHEPHSGGRQ 116 Query: 134 -----GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK-YRRS-------- 179 S GS + Q++ G+A A+K YR++ Sbjct: 117 MNAHFASRSINPDGSWKDLTQMKNSASDVSSTATQMARLIGLAQASKLYRQNPELKEFSQ 176 Query: 180 -----DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 +++ G+ + ++G +E+ N A + + + I ++ Y + + + + Sbjct: 177 FSINGNEVAFGTIGNASTSEGLFFEAINAAGVLQIPLAISIWDDGYGISVPNKYQTTKED 236 Query: 235 FSKRGVSF----NIPGMQ---VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY-RYRG 286 S+ F + PG++ V G D A+ T + A+ CR P++I + + +G Sbjct: 237 ISEVLKGFQRTKDKPGIEIFKVKGWDYVALCETYETAIKMCREEHVPVLIHVTEMTQPQG 296 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HS S Y++ E + E +D I Q+RK +L + A+E ++ E+E ++ + +++ Sbjct: 297 HSTSGSHERYKSNERL-EWEREYDCIAQMRKWMLESAIATEEEISELEDTIKNEVRTTIK 355 >gi|91205914|ref|YP_538269.1| alpha-ketoglutarate decarboxylase [Rickettsia bellii RML369-C] gi|122425343|sp|Q1RHI4|ODO1_RICBR RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|91069458|gb|ABE05180.1| 2-oxoglutarate dehydrogenase E1 component [Rickettsia bellii RML369-C] Length = 927 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L N V++ + NNQ + + +RAS Sbjct: 338 KRSKVKAILVHGDAAFCGQGVVAESLSMSPLAAYNIGGVLHFVINNQLGFTANAADTRAS 397 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K +P + V+G DI AV + AV Y + +I+E++ YR GH+ Sbjct: 398 RYSTEFAK---IIAVPILHVNGDDIEAVLKATNIAVEYRQKFGKDVIVEIICYRKYGHNE 454 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N ++S P Sbjct: 455 GDEPMYTQGKMYNIIKSKLTP 475 >gi|15618293|ref|NP_224578.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydophila pneumoniae CWL029] gi|15835911|ref|NP_300435.1| alpha-ketoglutarate decarboxylase [Chlamydophila pneumoniae J138] gi|16752661|ref|NP_444926.1| alpha-ketoglutarate decarboxylase [Chlamydophila pneumoniae AR39] gi|33241723|ref|NP_876664.1| alpha-ketoglutarate decarboxylase [Chlamydophila pneumoniae TW-183] gi|4376656|gb|AAD18522.1| Oxoglutarate Dehydrogenase [Chlamydophila pneumoniae CWL029] gi|7189302|gb|AAF38225.1| 2-oxoglutarate dehydrogenase, E1 component [Chlamydophila pneumoniae AR39] gi|8978750|dbj|BAA98586.1| oxoglutarate dehydrogenase [Chlamydophila pneumoniae J138] gi|33236232|gb|AAP98321.1| 2-oxoglutarate dehydrogenase, E1 subunit [Chlamydophila pneumoniae TW-183] Length = 908 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 9/187 (4%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 + + ++ GD A + QG VYE+ ++ + + ++++ NN Y T+V R S Sbjct: 318 KEQSSLAILVHGDAAFSGQGVVYETLQLSRVPGYSTEGTLHIVVNN-YIGFTAVPRESRS 376 Query: 233 TNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 T + + IP +V+ D+ A ++ A+ +II++ YR GH+ SD Sbjct: 377 TPYCTDIAKMLGIPVFRVNSEDVVACIEAIEYALQVRERFSCDVIIDLCCYRKYGHNESD 436 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWA--SEGDLKEIEMNVRKIINNSVEFAQ- 348 + ++++ E R+ LL ++A SE L IE +++ +N + + Sbjct: 437 DPSVTAPLLYDQIKRKKSIRELFRQYLLEGQFADISEETLASIEKEIQESLNREFQVLKG 496 Query: 349 SDKEPDP 355 +D EP P Sbjct: 497 TDPEPFP 503 >gi|118081972|ref|XP_423753.2| PREDICTED: similar to Dehydrogenase E1 and transketolase domain containing 1 [Gallus gallus] Length = 1189 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GDGA + QG V E+ ++ L + V I++I NNQ T R + S Sbjct: 596 ICLQVHGDGAFSGQGIVPETLTLSNLPHFRVGGSIHLIVNNQLGYTTPPERGRSSLYCSD 655 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G D V AV Y R + +I+++L YR GH+ ++ Sbjct: 656 IGKIVGCAVIHVNGDDPEEVVRATRLAVEYQRHFRRDVIVDLLCYRQWGHNELDEPFFTN 715 Query: 292 PANY---RTREEINEMRSNH 308 P+ Y R+R+ I + + H Sbjct: 716 PSMYKIIRSRKSIPDTYAEH 735 >gi|149179253|ref|ZP_01857817.1| alpha-ketoglutarate decarboxylase [Planctomyces maris DSM 8797] gi|148841900|gb|EDL56299.1| alpha-ketoglutarate decarboxylase [Planctomyces maris DSM 8797] Length = 958 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 5/121 (4%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A +G V ES N++ L I+V+ NNQ T +++ + T Sbjct: 366 RTKGMVLLIHGDAAFAGEGVVQESLNLSELRGYRTGGTIHVVVNNQIGFTTDPAQSRSST 425 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-P 292 + IP V+G D AV + A+ + + ++I+M YR RGH+ D P Sbjct: 426 YATDVAKMLQIPIFHVNGEDPEAVAQVVRLAMDFRKEFHRDVVIDMYCYRRRGHNEGDEP 485 Query: 293 A 293 A Sbjct: 486 A 486 >gi|302825385|ref|XP_002994313.1| hypothetical protein SELMODRAFT_432239 [Selaginella moellendorffii] gi|300137809|gb|EFJ04627.1| hypothetical protein SELMODRAFT_432239 [Selaginella moellendorffii] Length = 113 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 1/96 (1%) Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPI 311 MD+ V +A+A + GPI++E TY Y +S P + + +PI Sbjct: 1 MDVLKVGEVAKEAIARAQRGDGPILVECETYWYIEVILS-PIRTSSASLQKSKHATCNPI 59 Query: 312 EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 +K LL + ASE +LK IE + +I+ ++VEFA Sbjct: 60 APFKKYLLEERLASEAELKAIEKKIEEIVEDAVEFA 95 >gi|256833025|ref|YP_003161752.1| 2-oxoglutarate dehydrogenase, E1 subunit [Jonesia denitrificans DSM 20603] gi|256686556|gb|ACV09449.1| 2-oxoglutarate dehydrogenase, E1 subunit [Jonesia denitrificans DSM 20603] Length = 1258 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 25/164 (15%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRASAQTNF 235 + ++ GD A A QG V E N++ L I++I NNQ + G S SR++ Sbjct: 665 LPILVHGDAAFAGQGVVMEVLNLSQLRGYRTGGTIHLIINNQVGFTTGPSNSRSTHYATD 724 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SM 289 +G + +P V+G D AV A Y +II+M+ YR RGH SM Sbjct: 725 VAKG--YQVPVFHVNGDDPEAVVRIARLAFDYRERFNQDVIIDMVCYRRRGHNEGDDPSM 782 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 + P Y E N +R +L AS GD+ + E Sbjct: 783 TQPLMYNLIEAKNSVR-----------KLYTETLASRGDISDEE 815 >gi|225571139|ref|ZP_03780137.1| hypothetical protein CLOHYLEM_07227 [Clostridium hylemonae DSM 15053] gi|225159970|gb|EEG72589.1| hypothetical protein CLOHYLEM_07227 [Clostridium hylemonae DSM 15053] Length = 278 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K D GDG +GQV+E+ +AA L N++ +++ Sbjct: 115 GSLGQGISAAVGMALSAKLSGDDYRVYTLLGDGEIQEGQVWEAAMLAAHRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + ++ ++ K+ +FN + +DG D A+ A +A +A KG P Sbjct: 175 NNNLQIDGAIDEVNSPYPIDKKFEAFNFHVINIDGHDFDAIDAAFKEA----KAVKGQPT 230 Query: 276 IIEMLTYRYRGHSM 289 I T + +G S Sbjct: 231 AIIAKTVKGKGVSF 244 >gi|220933271|ref|YP_002512170.1| alpha-ketoglutarate decarboxylase [Thioalkalivibrio sp. HL-EbGR7] gi|219994581|gb|ACL71183.1| alpha-ketoglutarate decarboxylase [Thioalkalivibrio sp. HL-EbGR7] Length = 948 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 11/136 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + VV GD + A QG V E+ NI+ + ++++ NNQ TS R + T++ + Sbjct: 358 LPVVVHGDASFAGQGVVMETLNISQTRGFSTKGTVHIVINNQIGFTTSTMRDARSTDYCT 417 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD----- 291 N P + V+G D AV + A Y A + ++I+++ YR GH+ +D Sbjct: 418 DVAKMVNAPILHVNGDDPEAVVFAVQIAFDYRMAFRKDVVIDLVCYRRHGHNEADEPAVT 477 Query: 292 -PANYRTREEINEMRS 306 PA Y+ ++ R+ Sbjct: 478 QPAMYQAIRKLPTTRA 493 >gi|317500929|ref|ZP_07959139.1| transketolase [Lachnospiraceae bacterium 8_1_57FAA] gi|331089171|ref|ZP_08338074.1| hypothetical protein HMPREF1025_01657 [Lachnospiraceae bacterium 3_1_46FAA] gi|316897632|gb|EFV19693.1| transketolase [Lachnospiraceae bacterium 8_1_57FAA] gi|330405948|gb|EGG85474.1| hypothetical protein HMPREF1025_01657 [Lachnospiraceae bacterium 3_1_46FAA] Length = 278 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 7/149 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G VS G+A A K D GDG +GQV+E+ +A+ L N++ +++ Sbjct: 115 GSLGQGVSAAVGMAIAAKISGDDYRVYTLLGDGEIQEGQVWEAAMLASHHKLDNLLVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + +++ ++ K+ +FN + +DG D + A +A ++ KG P Sbjct: 175 NNNLQIDGEITKVNSPYPIDKKFEAFNFHVINIDGNDFDQIDAAFKEA----KSVKGRPT 230 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINE 303 +I T + +G S M + A + + +E Sbjct: 231 VIIAKTVKGKGVSFMENQAGWHGKAPNDE 259 >gi|332288477|ref|YP_004419329.1| 2-oxoglutarate dehydrogenase E1 component [Gallibacterium anatis UMN179] gi|330431373|gb|AEC16432.1| 2-oxoglutarate dehydrogenase E1 component [Gallibacterium anatis UMN179] Length = 937 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 16/178 (8%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNG-------FYGGHGIVGAQVSLGTGIAFANK---YRR 178 LT R G + +G S + F T++G F H + + V +G+ A N+ R Sbjct: 287 LTDRTGDVKYHQGFSSN-FMTEHGLVHLALAFNPSHLEIVSPVVIGSVRARQNRSHDTER 345 Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 + + V GD A A QG V E+ N++A V I ++ NNQ TS + T Sbjct: 346 QNVLAVTVHGDSAVAGQGIVQETLNMSATRGYTVGGTIRIVINNQIGFTTSNPHDTRSTE 405 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + + P + V+G D AV AV Y K I I++++YR GH+ +D Sbjct: 406 YCTDIAKMIQAPIIHVNGDDPEAVAFAGRIAVEYRAKFKRDIFIDLISYRRHGHNEAD 463 >gi|118590558|ref|ZP_01547960.1| alpha-ketoglutarate decarboxylase [Stappia aggregata IAM 12614] gi|118437021|gb|EAV43660.1| alpha-ketoglutarate decarboxylase [Stappia aggregata IAM 12614] Length = 995 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++AL ++VI NNQ T+ + + Sbjct: 392 RGTVLPLLLHGDAAFAGQGVVAECFGLSALRGHRTGGSVHVIINNQIGFTTNPRFSRSSP 451 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+ D AV A+ Y + P++I+M+ YR GH+ D Sbjct: 452 YPSDMAKVIEAPIFHVNADDPEAVVFAAKIAIEYRQTFHRPVVIDMICYRRFGHNEGDEP 511 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + ++R + ++ +RL+ ++ +++ ++ + RK +++ + Q+ K P Sbjct: 512 AFTQPIMYRKIRKHATTLQLYSERLIKEGVLTQDEIEHMKADWRKHLDDEFDAGQAFK-P 570 Query: 354 DPAE 357 + A+ Sbjct: 571 NKAD 574 >gi|114762322|ref|ZP_01441780.1| putative transketolase alpha subunit protein [Pelagibaca bermudensis HTCC2601] gi|114544940|gb|EAU47944.1| putative transketolase alpha subunit protein [Roseovarius sp. HTCC2601] Length = 282 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 3/111 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G A K +RSD++ DG +G +E+ A W L N+I +++ Sbjct: 122 GSLGHGLGIAVGAALGLKRKRSDRVVYNLMSDGELGEGSTWEAVMSAVQWKLDNLICLVD 181 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 NNQ A G S A AQ + + +F +VDG D+ A+ A D A A Sbjct: 182 FNNQQADGPSRD-ALAQVPEAPKWEAFGWHAQEVDGNDLSALVAAFDTARA 231 >gi|210076290|ref|XP_504734.2| YALI0E33517p [Yarrowia lipolytica] gi|199426995|emb|CAG80338.2| YALI0E33517p [Yarrowia lipolytica] Length = 1004 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 4/166 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ + +L + I++I NNQ T + + S Sbjct: 387 VLMHGDAAFAGQGVVYETMGMHSLPAYSTGGTIHIIVNNQIGFTTDPRFSRSTPYPSDLA 446 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 S + P V+ D+ AV + A + K +II+++ YR GH+ +D ++ Sbjct: 447 KSIDAPIFHVNADDMEAVDFIFNLAADWRATFKSDVIIDLVCYRKFGHNETDQPSFTQPL 506 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 ++ +P++ +LL K ++ D++E + V ++ S + Sbjct: 507 MYKKIADKPNPLDIYVDKLLKEKTFTKEDIEEHKQWVWGMLEESFK 552 >gi|58578933|ref|YP_197145.1| alpha-ketoglutarate decarboxylase [Ehrlichia ruminantium str. Welgevonden] gi|58417559|emb|CAI26763.1| 2-oxoglutarate dehydrogenase E1 component [Ehrlichia ruminantium str. Welgevonden] Length = 913 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 7/181 (3%) Query: 184 VVCFGDGAA-NQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A QG V E+ ++ L+ V I+++ NNQ T+ + + S Sbjct: 326 VLVHGDAAVIGQGIVAETLTLSNLFGYKVCGVIHIVVNNQVGFTTNPEDSRSSLYCSDIA 385 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + P V+G + AV + AV Y + ++I+++ YR H+ D + Sbjct: 386 RIIDAPVFHVNGDSMEAVTTAVKLAVEYRQKFNKDVVIDIVCYRRYEHNEGDEPLFTQPV 445 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE-PDPAEL 358 N + + P++ ++L++NK ++ D ++ ++ S EFA S+ PD A+ Sbjct: 446 MYNRIIKHKTPMKLYAEQLINNKVITQEDFNVLQDQFHSVL--SEEFASSENYFPDQADW 503 Query: 359 Y 359 + Sbjct: 504 F 504 >gi|302817517|ref|XP_002990434.1| hypothetical protein SELMODRAFT_131626 [Selaginella moellendorffii] gi|300141819|gb|EFJ08527.1| hypothetical protein SELMODRAFT_131626 [Selaginella moellendorffii] Length = 83 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 34/48 (70%) Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 +GD + + YR H H ++ G+ A ++M+EL G+ G +G+GGSMHMFS Sbjct: 27 QGDYICSTYRNHVHAVSKGIPARQVMSELFGKSTGCCRGQGGSMHMFS 74 >gi|293189468|ref|ZP_06608188.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Actinomyces odontolyticus F0309] gi|292821558|gb|EFF80497.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Actinomyces odontolyticus F0309] Length = 1304 Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 I ++ GD A QG V E+FN++ L I++I NNQ T ++ + + Sbjct: 698 IPILIHGDAAFIGQGVVQETFNLSQLEGYKTGGTIHIIVNNQIGFTTGPTQGRSTGYATD 757 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 +P + V+ D AV A Y A +II+M+ YR RGH SM+ Sbjct: 758 LAKGLQVPILHVNADDPEAVIRCAHLAFEYRNAFHKDVIIDMVCYRRRGHNEGDDPSMTQ 817 Query: 292 PANYRTREEINEMRS 306 P Y + I R+ Sbjct: 818 PVMYSLIDRIPSTRA 832 >gi|103487709|ref|YP_617270.1| 2-oxoglutarate dehydrogenase E1 component [Sphingopyxis alaskensis RB2256] gi|98977786|gb|ABF53937.1| 2-oxoglutarate dehydrogenase E1 component [Sphingopyxis alaskensis RB2256] Length = 940 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 17/189 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V+E + + N I+ I NNQ TS A + S Sbjct: 334 LPVLIHGDAAFAGQGIVWECLGFSGIRGYNTGGCIHFIVNNQIGFTTSPQFARSSPYPSD 393 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 P + V+G D AV A+ + + K ++I+M YR GH+ D ++ T Sbjct: 394 VAKGVQAPILHVNGDDPEAVTFACKLAIDFRQQFKRDVVIDMWCYRRFGHNEGDEPSF-T 452 Query: 298 REEINEMRSNHDPIEQV------RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + + E H P+ Q+ + ++ WA D + E+ R + + E A+S K Sbjct: 453 QPLMYERIRKHPPVSQLCAAKLEAEGVIEPGWA---DARRAELVAR--LESDFEAAKSYK 507 Query: 352 EPDPAELYS 360 P+ A+ ++ Sbjct: 508 -PNKADWFA 515 >gi|307710984|ref|ZP_07647407.1| transketolase family protein [Streptococcus mitis SK321] gi|307617224|gb|EFN96401.1| transketolase family protein [Streptococcus mitis SK321] Length = 285 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 14/161 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + R+S GDG N+GQ +E+ A+ L N+I ++ Sbjct: 120 GSLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + +F ++ +F ++V+G DIR + + + + I+ Sbjct: 180 DNKKQLDGFTKDICNPGDFVEKFSAFGFESIRVNGSDIREIYEGIVRLKQSNDSSPKCIV 239 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 + D + E+ EM+SNH V +R Sbjct: 240 L-------------DTTKGQGVRELEEMKSNHHLRPTVEER 267 >gi|308801643|ref|XP_003078135.1| putative 2-oxoglutarate dehydrogenase E1 component (ISS) [Ostreococcus tauri] gi|116056586|emb|CAL52875.1| putative 2-oxoglutarate dehydrogenase E1 component (ISS) [Ostreococcus tauri] Length = 1122 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 18/163 (11%) Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-AN 193 +GG +H+ N + + A ++ TG A ++ D + V+ GDGA + Sbjct: 410 RGGQIHLSVVANPSH-----LEAVNTVVTGKTRAKQFYTKDPKGERSMAVLLHGDGAFSG 464 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRASAQTNFSKRGVSFNIPGMQ 248 QG VYE+ +++ L V ++++ NNQ A T SR+S +G+ +P Sbjct: 465 QGIVYETLDMSKLPEYQVGGTLHIVVNNQVAFTTDPKYSRSSPYCTDVAKGM--EVPIFH 522 Query: 249 VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+G D+ AV M+ A + K +++++ YR GH+ D Sbjct: 523 VNGDDVEAVAWVMELATEWRMKWKTDAVVDIVCYRKYGHNEID 565 >gi|254487729|ref|ZP_05100934.1| dehydrogenase/transketolase family protein [Roseobacter sp. GAI101] gi|214044598|gb|EEB85236.1| dehydrogenase/transketolase family protein [Roseobacter sp. GAI101] Length = 728 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 82/192 (42%), Gaps = 22/192 (11%) Query: 134 GGISKGKGGSMHMFSTKNGFYGGH--GIVGAQVSLGTGIAFANKYR--RSDKICVVCFGD 189 GG K G M + H VGA ++G ++R D I + FGD Sbjct: 126 GGRHKVLGSRALMIPPQTSTIASHLPKAVGAAHAIGLARRNPPEHRILPRDGIAMCSFGD 185 Query: 190 GAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 +AN + N AA W + +++V E+N + T + + S R Sbjct: 186 ASANHSTAQGAIN-AACWTSVQGVPMPLLFVCEDNGIGISTKTPFGWIKASMSAR----- 239 Query: 244 IPGM---QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTRE 299 PGM + DG+D+ A A +A + R H+ P + + T R GH+ +D A +Y + Sbjct: 240 -PGMAYFEADGLDLFAAYAAAKEAADFVRTHRKPAFLHLRTVRLYGHAGADVATSYLPKA 298 Query: 300 EINEMRSNHDPI 311 E+ +N DP+ Sbjct: 299 EVEADEAN-DPL 309 >gi|329571265|gb|EGG52959.1| pyruvate dehydrogenase E1 component subunit alpha domain protein [Enterococcus faecalis TX1467] Length = 133 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 3/69 (4%) Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHD 309 MD AV A +A + A GP++IE LTYRY H++S DP YR++E +E D Sbjct: 1 MDPLAVYAIAKEARDWSAAGNGPVLIETLTYRYGPHTLSGDDPTRYRSKEMDDEW-VQKD 59 Query: 310 PIEQVRKRL 318 P+ + RK L Sbjct: 60 PLTRFRKYL 68 >gi|271969479|ref|YP_003343675.1| alpha-ketoglutarate decarboxylase [Streptosporangium roseum DSM 43021] gi|270512654|gb|ACZ90932.1| alpha-ketoglutarate decarboxylase [Streptosporangium roseum DSM 43021] Length = 1241 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 8/120 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N++ L ++++ NNQ +G + S AS++++ Sbjct: 658 LPVLVHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHIVVNNQ--VGFTTSPASSRSSVYA 715 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 V+ I P + V+G D AV A Y +A + ++I+++ YR RGH+ SD ++ Sbjct: 716 TDVARMIQAPILHVNGDDPEAVVRVGKLAFEYRQAFRKDVVIDLICYRRRGHNESDNPSF 775 >gi|284992550|ref|YP_003411104.1| 2-oxoglutarate dehydrogenase, E1 subunit [Geodermatophilus obscurus DSM 43160] gi|284065795|gb|ADB76733.1| 2-oxoglutarate dehydrogenase, E1 subunit [Geodermatophilus obscurus DSM 43160] Length = 1294 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N++ L ++V+ NNQ TS +++ + + Sbjct: 713 LPVLLHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHVVINNQVGFTTSPAQSRSSLYSTD 772 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 N P V+G D A AV Y +A K ++++++ YR RGH SM+ Sbjct: 773 VARMVNAPIFHVNGDDPEACVRVARLAVEYRQAFKKDVVVDLVCYRRRGHNEGDDPSMTQ 832 Query: 292 PANY 295 P Y Sbjct: 833 PLMY 836 >gi|317128669|ref|YP_004094951.1| 2-oxoglutarate dehydrogenase, E1 subunit [Bacillus cellulosilyticus DSM 2522] gi|315473617|gb|ADU30220.1| 2-oxoglutarate dehydrogenase, E1 subunit [Bacillus cellulosilyticus DSM 2522] Length = 943 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 19/191 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + ++ GD A QG V E+ N+ L + I++I NN T++S S TN+ S Sbjct: 356 LAILIHGDAAFPGQGIVAETLNLGKLKGYSTGGTIHIIANNIIGF-TTISEDSRSTNYAS 414 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANY 295 F IP + V+ D A A + A+ Y III+++ YR GH+ M +P Sbjct: 415 DLAKGFEIPIIHVNADDPEACLAAIHLAIQYRNTFHKDIIIDLVGYRRFGHNEMDEPL-- 472 Query: 296 RTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLK--------EIEMNVRKIIN-NSVE 345 T+ ++ + H+ + Q+ K+L SE L+ E+E + +K+ + E Sbjct: 473 VTQPKLYKKIKKHETVCQIYEKKLKEQSVVSEDTLQSMREKYLAELEQHFKKVKDGKKSE 532 Query: 346 FAQSDKEPDPA 356 + D P P Sbjct: 533 LKEEDTLPPPP 543 >gi|153815989|ref|ZP_01968657.1| hypothetical protein RUMTOR_02234 [Ruminococcus torques ATCC 27756] gi|145846636|gb|EDK23554.1| hypothetical protein RUMTOR_02234 [Ruminococcus torques ATCC 27756] Length = 272 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 7/149 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G VS G+A A K D GDG +GQV+E+ +A+ L N++ +++ Sbjct: 109 GSLGQGVSAAVGMAIAAKISGDDYRVYTLLGDGEIQEGQVWEAAMLASHHKLDNLLVIVD 168 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + +++ ++ K+ +FN + +DG D + A +A ++ KG P Sbjct: 169 NNNLQIDGEITKVNSPYPIDKKFEAFNFHVINIDGNDFDQIDAAFKEA----KSVKGRPT 224 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINE 303 +I T + +G S M + A + + +E Sbjct: 225 VIIAKTVKGKGVSFMENQAGWHGKAPNDE 253 >gi|51103083|gb|AAT96229.1| transketolase [Pseudomonas viridiflava] Length = 282 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 92/227 (40%), Gaps = 17/227 (7%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 IRR + GQ+ G G VG G L + K E +Q Y GH A Sbjct: 20 IRRHALRMGQVQGQGYVGQALGAADLLAVSYFHAMSYKSEDPEWEQRDRFYLSIGH-YAI 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FAN 174 + A+ I AE+ + G S S + G I G + G GIA Sbjct: 79 ALYAALIEAEIIPLDELETYGSDDSRLPMSGMAAYTPGMEITGGSLGHGLGIAVGACLGL 138 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQ 232 K + S DG N+G +E+ A+ W L N+I +I+ NNQ A G S S A Sbjct: 139 KRKSSASFVYNLLSDGELNEGSTWEAAMSASHWKLDNLIAIIDVNNQQADGHS-SEVLAF 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--PIII 277 R +F +VDG D++A+ A D A R H G P +I Sbjct: 198 EPIVDRWQAFGWFTQRVDGNDLQALVAAFDAA----RQHPGAQPRVI 240 >gi|41406786|ref|NP_959622.1| hypothetical protein MAP0688 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395136|gb|AAS03005.1| hypothetical protein MAP_0688 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 297 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 75/312 (24%), Positives = 124/312 (39%), Gaps = 53/312 (16%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD--QMIT 107 + L YR M ++R + + + + GQEAV VG +L GD T Sbjct: 7 DDRLEPYRRMWVLRLLDMALDESGVGAAIDDDAPVDFGQEAVAVGAVAALRPGDLVNATT 66 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 H + G+ +AEL G G G GGS K+G + + +LG Sbjct: 67 PRFRHAQQIGLGLPLGPAIAELLGTTRG---GAGGS-----RKSGAADWKQALANESALG 118 Query: 168 TGIAFA----NKYRRS-DKICVVCFGDGAANQG-QVYESFNIAALWNLNVIYVIENNQYA 221 FA N R + D +C G+ + + IAA W L V++V++N + Sbjct: 119 QSTLFALGDANAQRMAGDGRVTLCAIAGSDTHSVEFATAAKIAASWRLPVVFVVQNVRG- 177 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 G R + ++ +P VD D+ AV ++ +AV A GP ++E +T Sbjct: 178 -GPDARRCAYRSE--------TMPMALVDDRDVVAVGDSVGQAVRRASAGGGPSLVEAIT 228 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNH----DPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 Y R+NH DP+ R+RL+ + + L E+E R Sbjct: 229 Y----------------------RTNHPVAIDPLVLARRRLMADGIDPD-RLVEVERGAR 265 Query: 338 KIINNSVEFAQS 349 ++ ++ A++ Sbjct: 266 HLVAEAMACAKA 277 >gi|226325907|ref|ZP_03801425.1| hypothetical protein COPCOM_03720 [Coprococcus comes ATCC 27758] gi|225205449|gb|EEG87803.1| hypothetical protein COPCOM_03720 [Coprococcus comes ATCC 27758] Length = 278 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 7/149 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K D GDG +GQV+E+ +A L N++ +++ Sbjct: 115 GSLGQGISAAVGMAISAKLSNDDYRVYTLLGDGEIQEGQVWEASMLAGFRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + + ++ K+ +FN + +DG D + A +A R KG P Sbjct: 175 NNNLQIDGRIDEVNSPYPIDKKFEAFNFHVINIDGHDFDQIAAAFKEA----RETKGMPT 230 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINE 303 I T + +G S M D A + + +E Sbjct: 231 AIIAKTIKGKGVSFMEDQAGWHGKAPNDE 259 >gi|328951361|ref|YP_004368696.1| 2-oxoglutarate dehydrogenase, E1 subunit [Marinithermus hydrothermalis DSM 14884] gi|328451685|gb|AEB12586.1| 2-oxoglutarate dehydrogenase, E1 subunit [Marinithermus hydrothermalis DSM 14884] Length = 930 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/202 (23%), Positives = 97/202 (48%), Gaps = 11/202 (5%) Query: 164 VSLGTGIAFANKY---RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 V+LG A +++ R+ + ++ GD A A +G V E+ N++ L V ++VI Sbjct: 323 VALGRTRAKQDRFGDAARTRGMALIVHGDAAFAGEGIVQETLNLSRLPAYEVGGTLHVIV 382 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ TS + + +P V+G D AV + A+ + + ++ Sbjct: 383 NNQVGFTTSPEEGRSTLYATDVAKMLQVPIFHVNGEDPEAVAHVVALALEFRKTFHRDVV 442 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPI-EQVRKRLLHNKWASEGDLKEIEMN 335 I++ +R RGH+ +D ++ T+ + + + H+P+ ++ R +L+ E + + I Sbjct: 443 IDLYAFRRRGHNEADEPSF-TQPLMYKAIARHEPLYKRYRAQLVQEGVIREAEAEAIARA 501 Query: 336 VRKIINNSVEFAQSDKEPDPAE 357 R+ + +E A+ +EP P + Sbjct: 502 YREHLEAELEAAK--REPTPPK 521 >gi|154505552|ref|ZP_02042290.1| hypothetical protein RUMGNA_03089 [Ruminococcus gnavus ATCC 29149] gi|153794210|gb|EDN76630.1| hypothetical protein RUMGNA_03089 [Ruminococcus gnavus ATCC 29149] Length = 278 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K +D GDG +GQV+E+ +AA L N++ +++ Sbjct: 115 GSLGQGISAAVGMAIAGKLDNADYRVYTLLGDGEIQEGQVWEAAMLAAHKKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + ++ ++ K+ +FN + +DG D + A +A Sbjct: 175 NNNLQIDGAIDEVNSPYPIDKKFEAFNFHVINIDGNDFDQIDAAFKEA 222 >gi|322819452|gb|EFZ26570.1| 2-oxoglutarate dehydrogenase subunit, putative [Trypanosoma cruzi] Length = 1007 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 9/197 (4%) Query: 165 SLGTGIAFANKYRRSDKIC-----VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVI 215 SL G A A + ++D C ++ GD A QG YE L N V I++I Sbjct: 355 SLVLGKARARQLYKNDTDCAEVLPILIHGDSAIMGQGSCYEVMGFCGLENYRVGGTIHII 414 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 NNQ T S++ + S N P + V+G D+ A A + + I Sbjct: 415 LNNQIGFTTEPSQSRSSIYCSDLSKVNNAPVLHVNGDDVEACVRAGRIATLFRQEFHRDI 474 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 II+++ YR GH+ +D ++ + +RS+ ++ L+ + +E +K + Sbjct: 475 IIDLICYRRNGHNEADLPDFTQPHLYHAIRSHPTLVDIYSNVLVQDGLITEEAVKAKKKE 534 Query: 336 VRKIINNSVEFAQSDKE 352 + +++ AQS ++ Sbjct: 535 YEGQMRQALDAAQSSQD 551 >gi|71409705|ref|XP_807183.1| 2-oxoglutarate dehydrogenase subunit [Trypanosoma cruzi strain CL Brener] gi|70871129|gb|EAN85332.1| 2-oxoglutarate dehydrogenase subunit, putative [Trypanosoma cruzi] Length = 1007 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 11/198 (5%) Query: 165 SLGTGIAFANKYRRSDKIC-----VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVI 215 SL G A A + ++D C ++ GD A QG YE L N V I++I Sbjct: 355 SLVLGKARARQLYKNDTDCAEVLPILIHGDSAIMGQGSCYEVMGFCGLENYRVGGTIHII 414 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA-VKATMDKAVAYCRAHKGP 274 NNQ T S++ + S N P + V+G D+ A V+A A+ H+ Sbjct: 415 LNNQIGFTTEPSQSRSSIYCSDLSKVNNAPVLHVNGDDVEACVRAGRIAALFRQEFHRD- 473 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 III+++ YR GH+ +D ++ + +RS+ ++ L+ + +E +K + Sbjct: 474 IIIDLICYRRNGHNEADLPDFTQPHLYHAIRSHPTLVDIYSNVLVQDGLITEEAVKAKKK 533 Query: 335 NVRKIINNSVEFAQSDKE 352 + +++ AQS ++ Sbjct: 534 EYEGQMRQALDAAQSSQD 551 >gi|161598675|ref|NP_939364.2| alpha-ketoglutarate decarboxylase [Corynebacterium diphtheriae NCTC 13129] Length = 1237 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 19/159 (11%) Query: 174 NKYRRSDKICVVCF---GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV 226 NK +D VV GD A A G V E+ N+A L V I++I NNQ T+ Sbjct: 639 NKGDSTDGYSVVPMMLHGDAAFAGLGIVQETLNLAQLRGYTVGGTIHIIVNNQIGFTTTP 698 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + + ++ P V+G D AV A Y R + I+M++YR RG Sbjct: 699 DSGRSSHYATDLAKAYGCPVFHVNGDDPEAVVWVGRLATEYRRQFGKDVFIDMISYRRRG 758 Query: 287 H------SMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 H SM+ P Y+ + N +R EQ ++ LL Sbjct: 759 HNEADDPSMTQPEMYKLIDARNTVR------EQYKEDLL 791 >gi|326336169|ref|ZP_08202341.1| 2-oxoglutarate dehydrogenase E1 component [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691678|gb|EGD33645.1| 2-oxoglutarate dehydrogenase E1 component [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 932 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 8/179 (4%) Query: 174 NKYRR--SDKICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 N Y+ S + +V GD A + QG VYE + L I+++ NNQ T+ S Sbjct: 337 NHYKENPSKVLPIVVHGDAAVSGQGIVYEVMQMERLRGYKTHGTIHIVINNQIGFTTNPS 396 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + T + F IP + V+ D AV M A+ Y I ++++ YR GH Sbjct: 397 DSRSTTYCTDIAKGFQIPILHVNADDTEAVVRVMLLALDYRMTFGQDIFLDVIGYRKYGH 456 Query: 288 SMSDPANYRTREEINEMRSNH-DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + D + T+ + ++ NH +P ++L++ S +++ E N R ++ +E Sbjct: 457 NEGDEPRF-TQPALYKLIGNHSNPTVIYTEKLVNQGIISAKEIEAYEENYRNHLDTELE 514 >gi|312196066|ref|YP_004016127.1| transketolase domain-containing protein [Frankia sp. EuI1c] gi|311227402|gb|ADP80257.1| Transketolase domain-containing protein [Frankia sp. EuI1c] Length = 623 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 68/134 (50%), Gaps = 8/134 (5%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G + G G+A A KY + ++ V+C GD +G ++E+ + A ++ L N+I + Sbjct: 126 GSLGQGLPYGVGVAIAGKYLDKSPYRVWVLC-GDSEMAEGSMWEALDKAHVYGLSNLIAI 184 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ++ N+ + +++R +F +++DG D+ A+ A + +A + GP Sbjct: 185 VDVNRLGQRGATELGWDLDTYARRAAAFGAHTIEIDGHDVDAIDAALTEADGF----DGP 240 Query: 275 IIIEMLTYRYRGHS 288 ++I T + G S Sbjct: 241 VVILAKTIKGDGFS 254 >gi|307545702|ref|YP_003898181.1| 2-oxoglutarate dehydrogenase, E1 component [Halomonas elongata DSM 2581] gi|307217726|emb|CBV42996.1| 2-oxoglutarate dehydrogenase, E1 component [Halomonas elongata DSM 2581] Length = 943 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 15/161 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG +H+ + F H + A V G+ A + RRSD + + GD A A Q Sbjct: 313 GGEVHLALS---FNPSHLEIVAPVVEGS--VRARQDRRSDPDGGKVLPINVHGDAAFAGQ 367 Query: 195 GQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVD 250 G V E+F ++ A I+++ NNQ TS R S T + + P V+ Sbjct: 368 GVVMETFQMSQTRAFETGGTIHIVINNQVGFTTSHPRDSRSTEYCTDIAKMVQAPIFHVN 427 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 G D AV A+ Y + K ++I+++ YR RGH+ +D Sbjct: 428 GDDPDAVLHATQVALDYRQQFKKDVVIDLVCYRRRGHNEAD 468 >gi|73544295|ref|XP_848042.1| 2-oxoglutarate dehydrogenase subunit [Leishmania major strain Friedlin] gi|321438396|emb|CBZ12150.1| putative 2-oxoglutarate dehydrogenase subunit [Leishmania major strain Friedlin] Length = 1006 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 10/147 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV--SRASAQ-TN 234 + ++ GD A A QG YE+ L N +V ++++ NNQ T+ SRASA T+ Sbjct: 374 LPILIHGDAAFAGQGSCYETMGFCELENFHVGGTLHLVINNQIGFTTNPKDSRASAYCTD 433 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 SK N P M V+G D+ A A + + III+++ YR GH+ +D + Sbjct: 434 LSKVN---NAPVMHVNGDDVDACVKAAKIAARFRQQFHHDIIIDLVCYRRYGHNETDLPD 490 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHN 321 + + +++R + ++ K L+ + Sbjct: 491 FTQPQLYHQIRQHPSVVDIYTKTLIKD 517 >gi|145595884|ref|YP_001160181.1| transketolase domain-containing protein [Salinispora tropica CNB-440] gi|145305221|gb|ABP55803.1| branched-chain alpha-keto acid dehydrogenase E1 component [Salinispora tropica CNB-440] Length = 792 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 25/198 (12%) Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWN-----LNVIYVIENNQYAMGTSVSRAS--- 230 + + + FGD + N + N A ++ L V+++ E+N +G SV Sbjct: 224 PESVVLCSFGDASVNHASATAALNAAGWYDHNGLRLPVLFLCEDN--GLGISVRSPQGWV 281 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A +K GV + + DG D+ A +AV + R H+ P ++ + T R GH+ + Sbjct: 282 AAVLRAKPGVRY----LTADGTDLVEAYAMAAEAVQWVRRHRRPAVLHLSTVRLMGHAGA 337 Query: 291 DPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEG-----DLKEIEMNVRKIINNSV 344 D YRT +E+ DP+ V RLL + G EI VR+I Sbjct: 338 DAETAYRTTDEMT-ADLERDPL-LVTARLLTGAGIATGAALLARYDEIGWQVRRIAE--- 392 Query: 345 EFAQSDKEPDPAELYSDI 362 E + K DPAE+ + + Sbjct: 393 EVLEEPKLADPAEILAPL 410 >gi|85709014|ref|ZP_01040080.1| 2-oxoglutarate dehydrogenase, E1 component [Erythrobacter sp. NAP1] gi|85690548|gb|EAQ30551.1| 2-oxoglutarate dehydrogenase, E1 component [Erythrobacter sp. NAP1] Length = 943 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 11/190 (5%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRAS 230 ++ + V+ GD A A QG V+ES +++ + + ++ I NNQ TS +R+S Sbjct: 342 KKEQVLPVLIHGDAAFAGQGVVWESLSLSGVPGYDTGGCLHFIINNQIGFTTSPMFARSS 401 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + +GV P + V+G D AV AV Y + ++I+M YR GH+ Sbjct: 402 PYPSDVAKGVM--APILHVNGDDPEAVTFACKLAVEYRQRFHRDVVIDMWCYRRFGHNEG 459 Query: 291 DPANYRTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + T+ + ++ S H + +V +RL+ +GD +++ + + E A+S Sbjct: 460 DEPKF-TQPIMYDVISKHPKVSRVYEERLIAEGVIDDGDRQKMADEFVSHLEDEFEAAKS 518 Query: 350 DKEPDPAELY 359 K P+ A+ + Sbjct: 519 YK-PNEADWF 527 >gi|38199857|emb|CAE49520.1| 2-oxoglutarate dehydrogenase, E1 and E2 components [Corynebacterium diphtheriae] Length = 1243 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 19/159 (11%) Query: 174 NKYRRSDKICVVCF---GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV 226 NK +D VV GD A A G V E+ N+A L V I++I NNQ T+ Sbjct: 645 NKGDSTDGYSVVPMMLHGDAAFAGLGIVQETLNLAQLRGYTVGGTIHIIVNNQIGFTTTP 704 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + + ++ P V+G D AV A Y R + I+M++YR RG Sbjct: 705 DSGRSSHYATDLAKAYGCPVFHVNGDDPEAVVWVGRLATEYRRQFGKDVFIDMISYRRRG 764 Query: 287 H------SMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 H SM+ P Y+ + N +R EQ ++ LL Sbjct: 765 HNEADDPSMTQPEMYKLIDARNTVR------EQYKEDLL 797 >gi|295394626|ref|ZP_06804845.1| 2-oxoglutarate dehydrogenase E1 component [Brevibacterium mcbrellneri ATCC 49030] gi|294972519|gb|EFG48375.1| 2-oxoglutarate dehydrogenase E1 component [Brevibacterium mcbrellneri ATCC 49030] Length = 1272 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 14/126 (11%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG VYE+ N++ L I+V+ NNQ +G + AS+++++ Sbjct: 691 LPVLVHGDAAFAGQGVVYETLNLSELRGYTTGGTIHVVINNQ--VGFTTPPASSRSSYYC 748 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SM 289 V+ I P + V+G D AV A Y + I+I+++ YR RGH SM Sbjct: 749 TDVAKAISAPVIHVNGDDPEAVYHAAQLAFDYRQEFNRDIVIDLVCYRRRGHNEGDDPSM 808 Query: 290 SDPANY 295 + P Y Sbjct: 809 TQPVMY 814 >gi|254514201|ref|ZP_05126262.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [gamma proteobacterium NOR5-3] gi|219676444|gb|EED32809.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [gamma proteobacterium NOR5-3] Length = 946 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 45/266 (16%) Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA--CGVDASKIMAELTGR--- 132 +GG+ G + +++GM A+R ++L G + S++ AE GR Sbjct: 251 IGGY-----GAKEIVIGM------------AHRGRLNVLVNILGKNPSELFAEFEGRAIY 293 Query: 133 --QGGISKGKGGSMHMFSTKN------GFYGGHGIVGAQVSLGTGIAFANKYRRSDK--- 181 G + +G S +M ++ F H + + V G+ A + RR D Sbjct: 294 ESSGDVKYHQGFSSNMMTSGGEVHLALAFNPSHLEIVSPVVEGS--VRARQDRRDDPNGS 351 Query: 182 --ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 +V GD A A QG V E+F ++ A ++++ NNQ TSV S T + Sbjct: 352 SVWPIVLHGDAAFAGQGVVMETFQMSQTRAYKTGGTVHIVLNNQVGFTTSVREDSRSTEY 411 Query: 236 -SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 + P V+ D AV A+ Y K ++I+++ YR RGH+ +D PA Sbjct: 412 CTDVAKMVQAPIFHVNADDPEAVLFVTQMAIDYRNEFKRDVVIDLVCYRRRGHNEADEPA 471 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLL 319 T+ ++ E H + R L Sbjct: 472 V--TQPQMYEAIRKHPTTRDIYARRL 495 >gi|148992022|ref|ZP_01821796.1| transketolase N-terminal subunit [Streptococcus pneumoniae SP9-BS68] gi|168489195|ref|ZP_02713394.1| transketolase N- section [Streptococcus pneumoniae SP195] gi|182685067|ref|YP_001836814.1| transketolase, N-terminal subunit [Streptococcus pneumoniae CGSP14] gi|194397231|ref|YP_002038716.1| transketolase N-terminal section [Streptococcus pneumoniae G54] gi|303254934|ref|ZP_07341018.1| transketolase [Streptococcus pneumoniae BS455] gi|303259633|ref|ZP_07345609.1| transketolase, N-terminal subunit [Streptococcus pneumoniae SP-BS293] gi|303262078|ref|ZP_07348023.1| transketolase, N-terminal subunit [Streptococcus pneumoniae SP14-BS292] gi|303264535|ref|ZP_07350454.1| transketolase, N-terminal subunit [Streptococcus pneumoniae BS397] gi|303267207|ref|ZP_07353073.1| transketolase, N-terminal subunit [Streptococcus pneumoniae BS457] gi|303269717|ref|ZP_07355471.1| transketolase, N-terminal subunit [Streptococcus pneumoniae BS458] gi|147929071|gb|EDK80082.1| transketolase N-terminal subunit [Streptococcus pneumoniae SP9-BS68] gi|182630401|gb|ACB91349.1| transketolase, N-terminal subunit [Streptococcus pneumoniae CGSP14] gi|183572333|gb|EDT92861.1| transketolase N- section [Streptococcus pneumoniae SP195] gi|194356898|gb|ACF55346.1| transketolase N-terminal section [Streptococcus pneumoniae G54] gi|301802800|emb|CBW35574.1| putative transketolase subunit [Streptococcus pneumoniae INV200] gi|302598116|gb|EFL65178.1| transketolase [Streptococcus pneumoniae BS455] gi|302636718|gb|EFL67208.1| transketolase, N-terminal subunit [Streptococcus pneumoniae SP14-BS292] gi|302639185|gb|EFL69644.1| transketolase, N-terminal subunit [Streptococcus pneumoniae SP-BS293] gi|302640750|gb|EFL71143.1| transketolase, N-terminal subunit [Streptococcus pneumoniae BS458] gi|302643271|gb|EFL73552.1| transketolase, N-terminal subunit [Streptococcus pneumoniae BS457] gi|302645905|gb|EFL76133.1| transketolase, N-terminal subunit [Streptococcus pneumoniae BS397] gi|332071566|gb|EGI82059.1| transketolase, thiamine diphosphate binding domain protein [Streptococcus pneumoniae GA17570] gi|332198743|gb|EGJ12825.1| transketolase, thiamine diphosphate binding domain protein [Streptococcus pneumoniae GA47368] Length = 285 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 14/152 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + R+S GDG N+GQ +E+ A+ L N+I ++ Sbjct: 120 GSLGQGISVATGLAYGQRIRKSPFYTYAIVGDGELNEGQCWEAIQFASHQQLSNLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + +F ++ +F ++V G DIR + + + + I+ Sbjct: 180 ENKKQLDGFTKDICNPGDFVEKFSAFGFESIRVKGSDIREIYEGIVQLKQSNNSSPKCIV 239 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNH 308 ++ + +G + +E+ EM+SNH Sbjct: 240 LDTI----KGQGV---------QELEEMKSNH 258 >gi|297562611|ref|YP_003681585.1| 2-oxoglutarate dehydrogenase, E1 subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847059|gb|ADH69079.1| 2-oxoglutarate dehydrogenase, E1 subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 1219 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N++ L ++VI NNQ TS S + + + Sbjct: 636 LPILIHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHVIVNNQVGFTTSPSDSRSSVYATD 695 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+G D AV A AY +A ++I+++ YR RGH+ D Sbjct: 696 VARMVQAPIFHVNGDDPEAVVRVAHLAFAYRQAFNKDVVIDLVCYRRRGHNEGD 749 >gi|71020737|ref|XP_760599.1| hypothetical protein UM04452.1 [Ustilago maydis 521] gi|46100487|gb|EAK85720.1| hypothetical protein UM04452.1 [Ustilago maydis 521] Length = 1221 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 19/210 (9%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVS 227 FA + + ++ GD A A QG VYE+ + L N ++++ NNQ T Sbjct: 585 FAKDKEHATSMALLMHGDAAFAGQGVVYETMGMYNLPNYATGGTVHIVVNNQIGFTTDPR 644 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 A + S S + P V+G D+ AV A + K ++I+++ YR GH Sbjct: 645 FARSTPYPSDIAKSIDAPIFHVNGDDVEAVTFVSQLAADWRATFKKDVVIDLVCYRRHGH 704 Query: 288 SMSDPANYRTREEINEMRSNHDP-IEQVRKRLLHNKWASEGDLKEIEMNV----RKIINN 342 + +D ++ T+ + + DP + + RL+ ++ D++E + V + + Sbjct: 705 NETDQPSF-TQPRMYAAIAKQDPTLSKYAARLVDEGSFTKSDIEEHQKWVWGMLEEAFDK 763 Query: 343 SVEFAQSDKE---------PDPAELYSDIL 363 S + ++E P P +L IL Sbjct: 764 SKNYRPEEREWLSSAWEGFPSPKQLAEQIL 793 >gi|330809890|ref|YP_004354352.1| transketolase, N-terminal domain protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377998|gb|AEA69348.1| putative transketolase, N-terminal domain protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 282 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 91/226 (40%), Gaps = 11/226 (4%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 IRR + GQ+ G G VG G L + K E +Q Y GH A Sbjct: 20 IRRHALRMGQVQGQGYVGQALGAADLLAVSYFHALNYKPDNPEWEQRDRFYLSIGH-YAI 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FAN 174 + A+ I AE+ + G S S + G I G + G GIA Sbjct: 79 ALYAALIEAEIIPLDELETYGSDDSRLPMSGMAAYTPGMEITGGSLGQGLGIAVGACLGL 138 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQ 232 K ++S DG N+G +E+ A+ W L N+I +++ NNQ A G S S A Sbjct: 139 KRKQSASFVYNLLSDGELNEGSTWEAVMSASHWKLDNLIAIVDVNNQQADGHS-SEVLAF 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 R +F +VDG D+ A+ D A ++ A II + Sbjct: 198 EPIVDRWQAFGWFTQRVDGNDLDALVKAFDAARSHPAAQPRVIICD 243 >gi|260836705|ref|XP_002613346.1| hypothetical protein BRAFLDRAFT_68313 [Branchiostoma floridae] gi|229298731|gb|EEN69355.1| hypothetical protein BRAFLDRAFT_68313 [Branchiostoma floridae] Length = 156 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 4/129 (3%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 G+EA +G +L D + YRE G L G +M + + KG+ ++ Sbjct: 28 GEEAAHMGSAAALDPADVIFGQYREAGVFLWRGFTLDDMMNQCFSTHRDVHKGRMVPINY 87 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-ICVVC-FGDGAANQGQVYESFNIA 204 S F +G Q+ G A+A R S K +CV C FGDGA+++G + FN A Sbjct: 88 GSRDINFVSMSSPLGTQMPQAAGAAYA--MRMSGKPLCVACYFGDGASSEGDAHAGFNFA 145 Query: 205 ALWNLNVIY 213 A + +I+ Sbjct: 146 ATLDCPLIF 154 >gi|328545845|ref|YP_004305954.1| Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component [polymorphum gilvum SL003B-26A1] gi|326415585|gb|ADZ72648.1| Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component [Polymorphum gilvum SL003B-26A1] Length = 995 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG V E F ++AL I+VI NNQ T+ + + Sbjct: 392 RSKVLPLLLHGDAAFAGQGVVAECFGLSALRGHRTGGSIHVIINNQIGFTTNPRFSRSSP 451 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + + P++I+M+ YR GH+ D Sbjct: 452 YPSDVAKVIEAPIFHVNGDDPEAVVYAAKIATEFRQIFGRPVVIDMICYRRFGHNEGDEP 511 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + ++R + ++ RL+ + +++E++ RK ++ E Q+ K P Sbjct: 512 AFTQPIMYRKIRKHPTTLQIYADRLIAEGVITAEEVEELKAAWRKHLDEEFEAGQTYK-P 570 Query: 354 DPAE 357 + A+ Sbjct: 571 NKAD 574 >gi|115522325|ref|YP_779236.1| 2-oxoglutarate dehydrogenase E1 component [Rhodopseudomonas palustris BisA53] gi|115516272|gb|ABJ04256.1| 2-oxoglutarate dehydrogenase E1 component [Rhodopseudomonas palustris BisA53] Length = 985 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 4/173 (2%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 +R + ++ GD A A QG V E F ++ L I+ I NNQ T + + Sbjct: 382 QRVSVLPLLMHGDAAFAGQGVVAECFGLSDLKGYRTGGSIHFIVNNQIGFTTYPRYSRSS 441 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 S + P V+G D AV AV + + P++I+M YR GH+ D Sbjct: 442 PYPSDVAKMIDAPIFHVNGDDPEAVVFAAKIAVEFRQKFHKPVVIDMFCYRRHGHNEGDE 501 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + ++ ++ ++ KRL+ + +EG++++ + + R ++ +E Sbjct: 502 PAFTQPAMYRKIAAHPSTLDIYSKRLIADGVITEGEIEKAKADWRARLDAELE 554 >gi|316969726|gb|EFV53782.1| dehydrogenase E1 component superfamily [Trichinella spiralis] Length = 199 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 5/86 (5%) Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 + N+A LW+L ++V ENN Y MGTSV R+SA T + RG +PG+ M+ + ++ Sbjct: 89 ALNMAKLWHLPCVFVCENNGYGMGTSVERSSASTEYYTRG--DYVPGLW--NME-KQIRK 143 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYR 285 ++KA+A P + + T Y+ Sbjct: 144 EVEKALAEALQDPEPPLELLYTDVYK 169 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 27/43 (62%) Query: 89 EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTG 131 EAV VGMK ++ E D +ITAYR HG L G+ ++ AEL Sbjct: 47 EAVAVGMKAAMNEDDSIITAYRCHGWSLLSGITLKQVFAELAA 89 >gi|317144488|ref|XP_001820159.2| 2-oxoglutarate dehydrogenase [Aspergillus oryzae RIB40] Length = 1061 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 83/174 (47%), Gaps = 5/174 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T + + S Sbjct: 440 VLLHGDAAFAGQGVVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRYSRSTPYCSDIA 499 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 S + P V+G D+ AV A + K ++I+++ YR +GH+ +D ++ Sbjct: 500 KSIDAPVFHVNGDDVEAVNYVCQVAADWRAEFKSDVVIDIVCYRKQGHNETDQPSFTQPL 559 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + + + +++ ++L+ ++ D+ E + V ++N+S + ++ D +P Sbjct: 560 MYKRIAAQKNQLDKYVEKLITEGTFTKEDIDEHKKWVWGMLNDSFDRSK-DYQP 612 >gi|254774264|ref|ZP_05215780.1| alpha-ketoglutarate decarboxylase [Mycobacterium avium subsp. avium ATCC 25291] Length = 1132 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+ L V I++I NNQ T+ + + + Sbjct: 543 VPMMLHGDAAFAGQGVVAETLNLTHLPGYRVGGTIHIIVNNQIGFTTAPEHSRSSEYCTD 602 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 603 VAKMIGAPIFHVNGDDPEACAWVAKLAVDFRQKFKKDVVIDMLCYRKRGHNEGDDPSMTN 662 Query: 292 PANY 295 PA Y Sbjct: 663 PAMY 666 >gi|227501632|ref|ZP_03931681.1| alpha-ketoglutarate decarboxylase [Corynebacterium accolens ATCC 49725] gi|227077657|gb|EEI15620.1| alpha-ketoglutarate decarboxylase [Corynebacterium accolens ATCC 49725] Length = 1257 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 5/136 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAAL---WNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD + G V E+ N++ L N ++++ NNQ T+ + + Sbjct: 666 VPVMLHGDASFTGLGVVQETINLSQLRGFTNGGTVHIVVNNQVGFTTTPDSGRSTHYVTD 725 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 F+ P V+G D AV A Y R + I+++ YR RGH+ +D + T Sbjct: 726 LAKGFDCPVFHVNGDDPEAVVWVGQMAAEYRRQFGKDVFIDLVVYRLRGHNEADDPSM-T 784 Query: 298 REEINEMRSNHDPIEQ 313 + ++ + NH+P+ + Sbjct: 785 QPQLYSVIENHEPVRE 800 >gi|168334995|ref|ZP_02693111.1| putative transketolase, N-terminal subunit [Epulopiscium sp. 'N.t. morphotype B'] Length = 277 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A A K + GDG N+GQV+E+ AA + L N++ +++ Sbjct: 119 GSLGQGISVAVGMAIAGKRDAKNYRVFTLLGDGETNEGQVWEAAQTAAKYQLDNLVVIVD 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 NN S + +K+ +F +DG D+ AV Sbjct: 179 NNNLQNDDSCDVVMPTLDLAKKFEAFGFETFAIDGHDMNAV 219 >gi|295680924|ref|YP_003609498.1| transketolase [Burkholderia sp. CCGE1002] gi|295440819|gb|ADG19987.1| Transketolase domain protein [Burkholderia sp. CCGE1002] Length = 281 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 7/131 (5%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + SD F DG ++G V+E AA Sbjct: 109 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRKASDSFVYTLFSDGELDEGAVWEGLMSAA 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 W L N+I +++ NNQ A G S ++ A + +F +VDG DI AVK D Sbjct: 169 HWKLDNLIALVDVNNQQADGPS-TQIMAFEPLVDKLEAFGWYTQRVDGNDIDAVKRAFDN 227 Query: 264 AVAYCRAHKGP 274 A R H P Sbjct: 228 A----RHHDKP 234 >gi|240851386|ref|YP_002972789.1| alpha-ketoglutarate dehydrogenase [Bartonella grahamii as4aup] gi|240268509|gb|ACS52097.1| alpha-ketoglutarate dehydrogenase [Bartonella grahamii as4aup] Length = 999 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 12/174 (6%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG + E+F ++ L V ++VI NNQ TS + + Sbjct: 396 RSKVMPLLIHGDAAFAGQGVIQETFGLSGLKGYRVAGSLHVIINNQIGFTTSPRFSRSSP 455 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV A + + P++I+M YR GH+ D Sbjct: 456 YPSDVAKMIDAPIFHVNGDDPEAVVFVAKIATEFRQIFHKPVVIDMFCYRRYGHNEGDEP 515 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG--DLKEIEMNVRKIINNSVE 345 ++ T+ + + NH Q L ++ +EG L+EIE +K+ + +E Sbjct: 516 SF-TQPLMYKAIRNHKTTLQ----LYSDQLVAEGVISLEEIEQQ-KKLWRDKLE 563 >gi|51102969|gb|AAT96117.1| transketolase [Pseudomonas viridiflava] Length = 282 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 91/227 (40%), Gaps = 17/227 (7%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 IRR + GQ+ G G VG G L + K E +Q Y GH A Sbjct: 20 IRRHALRMGQVQGQGYVGQALGAADLLAVSYFHAMSYKPEDPEWEQRDRFYLSIGHY-AI 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FAN 174 + A+ I AE+ + G S S + G I G + G GIA Sbjct: 79 ALYAALIEAEVIPLDELETYGSDDSRLPMSGMAAYTPGMEITGGSLGHGLGIAVGACLGL 138 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQ 232 K + S DG N+G +E+ A+ W L N+I +I+ NNQ A G S S A Sbjct: 139 KRKNSASFVYNLLSDGELNEGSTWEAAMSASHWKLDNLIAIIDVNNQQADGHS-SEVLAF 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--PIII 277 R +F +VDG D+ A+ A D A R H G P +I Sbjct: 198 EPIVDRWQAFGWFTQRVDGNDLHALVAAFDAA----RQHPGAQPRVI 240 >gi|83768018|dbj|BAE58157.1| unnamed protein product [Aspergillus oryzae] Length = 1019 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 83/174 (47%), Gaps = 5/174 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T + + S Sbjct: 398 VLLHGDAAFAGQGVVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRYSRSTPYCSDIA 457 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 S + P V+G D+ AV A + K ++I+++ YR +GH+ +D ++ Sbjct: 458 KSIDAPVFHVNGDDVEAVNYVCQVAADWRAEFKSDVVIDIVCYRKQGHNETDQPSFTQPL 517 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + + + +++ ++L+ ++ D+ E + V ++N+S + ++ D +P Sbjct: 518 MYKRIAAQKNQLDKYVEKLITEGTFTKEDIDEHKKWVWGMLNDSFDRSK-DYQP 570 >gi|148259730|ref|YP_001233857.1| transketolase domain-containing protein [Acidiphilium cryptum JF-5] gi|146401411|gb|ABQ29938.1| Transketolase domain protein [Acidiphilium cryptum JF-5] Length = 298 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 3/99 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G V + G+A K ++SD F DG N+G ++E AA W L N+I +++ Sbjct: 135 GSLGHGVGIAVGMALGLKRKKSDAFVYTLFSDGELNEGSIWEGVMGAAHWQLDNLIGIVD 194 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 N+Q A G S S S++ +R +F +VDG DI Sbjct: 195 VNDQQADGPS-SAMSSREPLHERFRAFGWHTQRVDGNDI 232 >gi|332881900|ref|ZP_08449542.1| Transketolase protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680135|gb|EGJ53090.1| Transketolase protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 781 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 66/297 (22%), Positives = 121/297 (40%), Gaps = 43/297 (14%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA-----------SKIMAELT--GRQ 133 G+E V M + EGD YR+ ++A GV + I A+ T GRQ Sbjct: 40 GKEVPQVAMARAFREGDFRSGYYRDQTFMMAIGVHTVEHFFAGLYAHADIEADPTSAGRQ 99 Query: 134 GG-----ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS--------- 179 G S + G + Q+ G+A A+K R+ Sbjct: 100 MGGHFTTHSLDENGEWKNLLKQKNSSSDISCTAGQMPRLLGLAQASKVYRALPNAAAEGF 159 Query: 180 ----DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG-------TSVSR 228 +++ G+ + ++G +E+ N A + + ++ + +++Y + T S Sbjct: 160 SDHGNEVAWGTIGNASTSEGHFFETLNAAGVMQVPMVMSVWDDEYGISVPKEYHTTKESI 219 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM--LTYRYRG 286 + F + I M V+G D A+ KA A R P+++ + LT + +G Sbjct: 220 SEVMKGFVRDDKHAGIELMVVNGWDYPALYEAYQKAAAIAREQHVPVLVHVRELT-QPQG 278 Query: 287 HSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 HS S Y++ E + E D I ++R+ +L + +A+E +L IE +K + + Sbjct: 279 HSTSGSHERYKSAERL-EWEKEFDCISKMREWILASGYATEEELATIEQQAKKRVKD 334 >gi|84500192|ref|ZP_00998458.1| 2-oxoglutarate dehydrogenase, E1 component [Oceanicola batsensis HTCC2597] gi|84392126|gb|EAQ04394.1| 2-oxoglutarate dehydrogenase, E1 component [Oceanicola batsensis HTCC2597] Length = 989 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 11/224 (4%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF---GDGA-ANQGQ 196 G ++H+ T N H V LG A ++ SD+ V+ GD A A QG Sbjct: 346 GNTVHLSLTANP---SHLEAVNPVVLGKARAKQDQLNDSDRTAVLPILLHGDAAFAGQGV 402 Query: 197 VYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 V E F ++ L I+++ NNQ T+ + + + + P V+G D Sbjct: 403 VAECFGLSGLRGHRTGGTIHIVVNNQIGFTTAPHFSRSSPYPTDIALMVEAPIFHVNGDD 462 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 AV A + + ++I+M YR GH+ D + +++ + + Sbjct: 463 PEAVVHAARVATEFRQKFHKDVVIDMFCYRRFGHNEGDEPMFTNPLMYKKIKGHKTTLSL 522 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 RL+ + EG++++++ + + +N E A D +P+ A+ Sbjct: 523 YTDRLVKDGLIPEGEIEDMKASFQSYLNEEFE-AGKDYKPNKAD 565 >gi|126668311|ref|ZP_01739270.1| alpha-ketoglutarate decarboxylase [Marinobacter sp. ELB17] gi|126627228|gb|EAZ97866.1| alpha-ketoglutarate decarboxylase [Marinobacter sp. ELB17] Length = 945 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 23/235 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG +H+ F H + + V +G+ A + RR DK + V+ GD A A Q Sbjct: 317 GGEIHL---ALAFNPSHLEIVSPVVVGS--VRARQTRREDKDGRQVLPVIMHGDAAFAGQ 371 Query: 195 GQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVD 250 G V E+F ++ ++++ NNQ TS + T + + P + V+ Sbjct: 372 GVVMETFQMSQTRGFGTGGTVHIVINNQVGFTTSRQEDARSTEYCTDIAKMVQAPILHVN 431 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTR--EEINEMRSN 307 D AV A+ Y KG ++I+++ YR RGH+ +D PA + E+I ++++ Sbjct: 432 ADDPEAVLFVTRMAMDYRNEFKGDVVIDLVCYRRRGHNEADEPAATQPMMYEKIRKLKTT 491 Query: 308 HDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS-DKEPDPAELYSD 361 + L+ SE K++E + R +++ ++ KEP+ A+L+ D Sbjct: 492 RN---IYVDSLIDAGVVSEDFAKQMENDYRTVLDKGEHVVKALVKEPN-AKLHVD 542 >gi|154339796|ref|XP_001565855.1| 2-oxoglutarate dehydrogenase subunit [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063173|emb|CAM45373.1| putative 2-oxoglutarate dehydrogenase subunit [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1007 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 22/192 (11%) Query: 166 LGTGIAFANKYRRSDKIC-----VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 L G A A + D C ++ GD A A QG YE+ L N +V ++++ Sbjct: 353 LVLGKAHARQVYTDDVECTTVLPILIHGDAAFAGQGSCYETMGFCELENFHVGGTLHLVI 412 Query: 217 NNQYAMGTSV--SRASAQ-TNFSKRGVSFNIPGMQVDGMDIRA-VKATMDKAVAYCRAHK 272 NNQ T+ SRASA T+ SK N P M V+G D+ A VKA A + H+ Sbjct: 413 NNQIGFTTNPKDSRASAYCTDLSKVN---NAPVMHVNGDDVDACVKAAKIAARFRHQFHR 469 Query: 273 GPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 III+++ YR GH+ +D ++ T+ ++ E H + + + L +G L Sbjct: 470 D-IIIDLVCYRRNGHNETDMPDF-TQPQLYEQIRRHPCLVDIYTKTL----IEDGTLTAE 523 Query: 333 EMNVRKIINNSV 344 E V K +SV Sbjct: 524 EAKVEKTEWDSV 535 >gi|51103030|gb|AAT96177.1| transketolase [Pseudomonas viridiflava] Length = 282 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 91/227 (40%), Gaps = 17/227 (7%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 IRR + GQ+ G G VG G L + K E +Q Y GH A Sbjct: 20 IRRHALRMGQVQGQGYVGQALGAADLLAVSYFHAMSYKSEDPEWEQRDRFYLSIGH-YAI 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FAN 174 + A+ I AE+ + G S S + G I G + G GIA Sbjct: 79 ALYAALIEAEIIPLDELETYGSDDSRLPMSGMAAYTPGMEITGGSLGHGLGIAVGACLGL 138 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQ 232 K + S DG N+G +E+ A+ W L N+I +I+ NNQ A G S S A Sbjct: 139 KRKNSASFVYNLLSDGELNEGSTWEAAMSASHWKLDNLIAIIDVNNQQADGHS-SEVLAF 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--PIII 277 R +F +VDG D+ A+ A D A R H G P +I Sbjct: 198 EPIVDRWQAFGWFTQRVDGNDLPALVAAFDAA----RQHPGAQPRVI 240 >gi|254823059|ref|ZP_05228060.1| alpha-ketoglutarate decarboxylase [Mycobacterium intracellulare ATCC 13950] Length = 1128 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+ L V I++I NNQ T+ + + + Sbjct: 539 VPMMLHGDAAFAGQGVVAETLNLTHLPGYRVGGTIHIIANNQIGFTTAPEYSRSSEYCTD 598 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 599 VAKMIGAPIFHVNGDDPEACAWVAKLAVDFRQEFKKDVVIDMLCYRKRGHNEGDDPSMTN 658 Query: 292 PANY 295 PA Y Sbjct: 659 PAMY 662 >gi|171185256|ref|YP_001794175.1| transketolase domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934468|gb|ACB39729.1| Transketolase domain protein [Thermoproteus neutrophilus V24Sta] Length = 267 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A + R + GDG ++GQ +ESF +AA + L N++ +++ Sbjct: 117 GSLGQGISIAVGLALGLRLRGEPGRVYLVTGDGELDEGQSWESFAVAAHYGLNNLVTIVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + + + R S +VDG D+ + ++KA R+ K P+I Sbjct: 177 LNGVQLDGHSEEVLRKGDLAARFRSLGFEVFEVDGHDVGQIIEALEKAE---RSAKPPVI 233 Query: 277 IEMLTYRYRG-HSMSDPANYR 296 I T R RG + D A R Sbjct: 234 IAK-TVRGRGVPPIEDTAKQR 253 >gi|163761405|ref|ZP_02168479.1| alpha-ketoglutarate decarboxylase [Hoeflea phototrophica DFL-43] gi|162281400|gb|EDQ31697.1| alpha-ketoglutarate decarboxylase [Hoeflea phototrophica DFL-43] Length = 996 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 5/180 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + S Sbjct: 397 MPLLLHGDAAFAGQGVVAEILGLSGLRGHRVAGTVHFIINNQIGFTTNPGFSRSSPYPSD 456 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 P V+G D AV A + P++I+M YR GH+ D ++ Sbjct: 457 VAKMIEAPIFHVNGDDPEAVVYAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEPSFTQ 516 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 + ++RS+ + +RL+ +EG+ ++++ + R + + QS K P+ A+ Sbjct: 517 PKMYKKIRSHETTVTLYARRLVEEGVITEGEFEKMKADWRAHLEGEFDIGQSYK-PNKAD 575 >gi|326403303|ref|YP_004283384.1| transketolase [Acidiphilium multivorum AIU301] gi|325050164|dbj|BAJ80502.1| transketolase [Acidiphilium multivorum AIU301] Length = 298 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 3/99 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G V + G+A K ++SD F DG N+G ++E AA W L N+I +++ Sbjct: 135 GSLGHGVGIAVGMALGLKRKKSDAFVYTLFSDGELNEGSIWEGVMGAAHWQLDNLIGIVD 194 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 N+Q A G S S S++ +R +F +VDG DI Sbjct: 195 VNDQQADGPS-SAMSSREPLHERFRAFGWHTQRVDGNDI 232 >gi|41408634|ref|NP_961470.1| alpha-ketoglutarate decarboxylase [Mycobacterium avium subsp. paratuberculosis K-10] gi|81413742|sp|Q73WX4|KGD_MYCPA RecName: Full=2-oxoglutarate decarboxylase; AltName: Full=2-oxoglutarate carboxy-lyase; AltName: Full=Alpha-ketoglutarate decarboxylase gi|41396992|gb|AAS04853.1| SucA [Mycobacterium avium subsp. paratuberculosis K-10] Length = 1247 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+ L V I++I NNQ T+ + + + Sbjct: 658 VPMMLHGDAAFAGQGVVAETLNLTHLPGYRVGGTIHIIVNNQIGFTTAPEHSRSSEYCTD 717 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 718 VAKMIGAPIFHVNGDDPEACAWVAKLAVDFRQKFKKDVVIDMLCYRKRGHNEGDDPSMTN 777 Query: 292 PANY 295 PA Y Sbjct: 778 PAMY 781 >gi|306834674|ref|ZP_07467757.1| 2-oxoglutarate dehydrogenase E1 component [Corynebacterium accolens ATCC 49726] gi|304569445|gb|EFM44927.1| 2-oxoglutarate dehydrogenase E1 component [Corynebacterium accolens ATCC 49726] Length = 613 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 5/136 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAAL---WNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD + G V E+ N++ L N ++++ NNQ T+ + + Sbjct: 22 VPVMLHGDASFTGLGVVQETINLSQLRGFTNGGTVHIVVNNQVGFTTTPDSGRSTHYVTD 81 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 F+ P V+G D AV A Y R + I+++ YR RGH+ +D + T Sbjct: 82 LAKGFDCPVFHVNGDDPEAVVWVGQMAAEYRRQFGKDVFIDLVVYRLRGHNEADDPSM-T 140 Query: 298 REEINEMRSNHDPIEQ 313 + ++ + NH+P+ + Sbjct: 141 QPQLYSVIENHEPVRE 156 >gi|227498060|ref|ZP_03928233.1| 2-oxoglutarate decarboxylase [Actinomyces urogenitalis DSM 15434] gi|226832528|gb|EEH64911.1| 2-oxoglutarate decarboxylase [Actinomyces urogenitalis DSM 15434] Length = 1295 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 101/257 (39%), Gaps = 39/257 (15%) Query: 87 GQEAVIVGMKMSLTEG-----DQMI--TAYREHGHILA--CGVDASKIMAELTGRQGGIS 137 G E++IV + L E D+++ A+R ++L G ++ E G + Sbjct: 563 GGESLIVLLDRLLDEAAHDGLDEVVIGMAHRGRLNVLTNIAGKSYGQVFDEFDGNGVIVG 622 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT-------------GIAFANKYR--RSDK- 181 G G + T+ G Y G V +VSL GI A + R DK Sbjct: 623 AGTGDVKYHLGTE-GVYTGTEGVTTRVSLAANPSHLETVDGVVEGIVRAKQDRIGLGDKG 681 Query: 182 ---ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 + V+ GD A A QG VYE+ N++ L ++V+ NNQ T + + T Sbjct: 682 YTVMPVLVHGDAAFAGQGVVYETLNMSQLRAYRTGGTVHVVVNNQIGFTTGSASGRSTTY 741 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------S 288 + +P V+ D V A Y +II+++ YR RGH S Sbjct: 742 ATDLAKGLQVPIFHVNADDPETVARAARHAYEYRATFHKDVIIDLICYRRRGHNEGDDPS 801 Query: 289 MSDPANYRTREEINEMR 305 M+ P Y + + R Sbjct: 802 MTQPVMYHLIDSLPSTR 818 >gi|7108690|gb|AAF36517.1|AF132072_1 pyruvate dehydrogenase E1 component alpha subunit precursor [Bos taurus] Length = 89 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 27/43 (62%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQE 89 +E L YR+M +RR E KA QLY ++ GFCHLC GQE Sbjct: 47 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQE 89 >gi|254250554|ref|ZP_04943873.1| Transketolase, N-terminal subunit [Burkholderia cenocepacia PC184] gi|124879688|gb|EAY67044.1| Transketolase, N-terminal subunit [Burkholderia cenocepacia PC184] Length = 281 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 7/131 (5%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + SD F DG ++G ++E AA Sbjct: 109 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRKGSDAFVYTLFSDGELDEGAIWEGLMSAA 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 W L N+I +++ NNQ A G S ++ A + +F +VDG DI AVK D Sbjct: 169 HWKLDNLIAIVDVNNQQADGPS-TQVMAFEPLVDKLEAFGWYVQRVDGNDIDAVKRAFDD 227 Query: 264 AVAYCRAHKGP 274 A R H P Sbjct: 228 A----RRHDAP 234 >gi|107029162|ref|YP_626257.1| transketolase-like [Burkholderia cenocepacia AU 1054] gi|116687033|ref|YP_840280.1| transketolase domain-containing protein [Burkholderia cenocepacia HI2424] gi|105898326|gb|ABF81284.1| Transketolase-like protein [Burkholderia cenocepacia AU 1054] gi|116652748|gb|ABK13387.1| Transketolase domain protein [Burkholderia cenocepacia HI2424] Length = 281 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 7/131 (5%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + SD F DG ++G ++E AA Sbjct: 109 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRKGSDAFVYTLFSDGELDEGAIWEGLMSAA 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 W L N+I +++ NNQ A G S ++ A + +F +VDG DI AVK D Sbjct: 169 HWKLDNLIAIVDVNNQQADGPS-TQVMAFEPLVDKLQAFGWYVQRVDGNDIDAVKRAFDD 227 Query: 264 AVAYCRAHKGP 274 A R H P Sbjct: 228 A----RRHDAP 234 >gi|256419438|ref|YP_003120091.1| transketolase domain protein [Chitinophaga pinensis DSM 2588] gi|256034346|gb|ACU57890.1| Transketolase domain protein [Chitinophaga pinensis DSM 2588] Length = 280 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 2/130 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G A + K D++ GDG +GQ +E+ A + N+I ++ Sbjct: 116 GSLGQGMSVAIGAALSKKLNNDDRLVFSLHGDGELEEGQNWEAIMFAPHHKVDNLIVTVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + +V + + + SF + +DG ++ V AT++KAV+ PI+ Sbjct: 176 WNGQQIDGTVEQVGGLGDLEPKFASFGWKVLHMDGNNMDEVVATLEKAVSLT-GQGQPIV 234 Query: 277 IEMLTYRYRG 286 I M T +G Sbjct: 235 ILMKTVMGKG 244 >gi|15966806|ref|NP_387159.1| alpha-ketoglutarate decarboxylase [Sinorhizobium meliloti 1021] gi|15076078|emb|CAC47632.1| Probable 2-oxoglutarate dehydrogenase E1 component protein [Sinorhizobium meliloti 1021] gi|15283981|gb|AAK00591.2| 2-oxoglutarate dehydrogenase E1 subunit [Sinorhizobium meliloti] Length = 998 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 395 RVKVMPLILHGDAAFAGQGVVAEILGLSGLRGHRVGGTVHFIINNQIGFTTNPAFSRSSP 454 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 455 YPSDVAKMIEAPIFHVNGDDPEAVVYAAKVATEFRMKFHKPVVIDMFCYRRFGHNEGDEP 514 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + + +R++ ++ RL+ SEG++++++ + R + E QS K P Sbjct: 515 AFTQPKMYKAIRAHKTVVQLYSDRLIAEGLISEGEVEKMKADWRAHLEQEFEAGQSYK-P 573 Query: 354 DPAE 357 + A+ Sbjct: 574 NKAD 577 >gi|22536383|ref|NP_687234.1| transketolase [Streptococcus agalactiae 2603V/R] gi|76787590|ref|YP_328930.1| transketolase [Streptococcus agalactiae A909] gi|76799222|ref|ZP_00781398.1| transketolase, N-terminal subunit [Streptococcus agalactiae 18RS21] gi|77405340|ref|ZP_00782435.1| transketolase, N-terminal subunit [Streptococcus agalactiae H36B] gi|77410974|ref|ZP_00787330.1| transketolase, N-terminal subunit [Streptococcus agalactiae CJB111] gi|22533210|gb|AAM99106.1|AE014201_4 transketolase, N-terminal subunit [Streptococcus agalactiae 2603V/R] gi|76562647|gb|ABA45231.1| transketolase, N-terminal subunit, putative [Streptococcus agalactiae A909] gi|76585425|gb|EAO62007.1| transketolase, N-terminal subunit [Streptococcus agalactiae 18RS21] gi|77163029|gb|EAO73984.1| transketolase, N-terminal subunit [Streptococcus agalactiae CJB111] gi|77176018|gb|EAO78792.1| transketolase, N-terminal subunit [Streptococcus agalactiae H36B] Length = 285 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 5/109 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TGIA+A K S GDG N+GQ +E+ AA L ++I ++ Sbjct: 120 GSLGQGISIATGIAYAQKIENSSYYTYTIVGDGELNEGQCWEAIQFAAHHQLHHLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 +N+ + + +F + +F ++V G DI A+ DKA+ Sbjct: 180 DNKKQLDGLTADICNPGDFVAKFEAFGFDAVRVKGDDIEAI----DKAI 224 >gi|325294005|ref|YP_004279869.1| 2-oxoglutarate dehydrogenase, E1 component [Agrobacterium sp. H13-3] gi|325061858|gb|ADY65549.1| 2-oxoglutarate dehydrogenase, E1 component [Agrobacterium sp. H13-3] Length = 998 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 7/185 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 395 RAKVLPLLLHGDAAFAGQGVVAEILGLSGLRGHRVAGTMHFIINNQIGFTTNPAFSRSSP 454 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A Y P++I+M YR GH+ D Sbjct: 455 YPSDVAKMIEAPIFHVNGDDPEAVVYAAKVATEYRMKFHKPVVIDMFCYRRFGHNEGDEP 514 Query: 294 NYRTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 + T+ ++ ++ H + ++ RL+ +EGD ++I+ + R + E QS K Sbjct: 515 AF-TQPKMYKVIRGHKTVARIYADRLIAEGLITEGDFEKIKADWRAHLEQEFEAGQSYK- 572 Query: 353 PDPAE 357 P+ A+ Sbjct: 573 PNKAD 577 >gi|307301634|ref|ZP_07581393.1| 2-oxoglutarate dehydrogenase, E1 subunit [Sinorhizobium meliloti BL225C] gi|307316342|ref|ZP_07595786.1| 2-oxoglutarate dehydrogenase, E1 subunit [Sinorhizobium meliloti AK83] gi|306898182|gb|EFN28924.1| 2-oxoglutarate dehydrogenase, E1 subunit [Sinorhizobium meliloti AK83] gi|306903332|gb|EFN33921.1| 2-oxoglutarate dehydrogenase, E1 subunit [Sinorhizobium meliloti BL225C] Length = 998 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 395 RVKVMPLILHGDAAFAGQGVVAEILGLSGLRGHRVGGTVHFIINNQIGFTTNPAFSRSSP 454 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 455 YPSDVAKMIEAPIFHVNGDDPEAVVYAAKVATEFRMKFHKPVVIDMFCYRRFGHNEGDEP 514 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + + +R++ ++ RL+ SEG++++++ + R + E QS K P Sbjct: 515 AFTQPKMYKAIRAHKTVVQLYSDRLIAEGLISEGEVEKMKADWRAHLEQEFEAGQSYK-P 573 Query: 354 DPAE 357 + A+ Sbjct: 574 NKAD 577 >gi|153854733|ref|ZP_01995967.1| hypothetical protein DORLON_01965 [Dorea longicatena DSM 13814] gi|149752640|gb|EDM62571.1| hypothetical protein DORLON_01965 [Dorea longicatena DSM 13814] Length = 278 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 7/149 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K D GDG +GQV+E+ +A L N++ +++ Sbjct: 115 GSLGQGISAAVGMAISAKLSNDDYRVYTLLGDGEIQEGQVWEASMLAGHRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + ++ ++ K+ +FN + +DG D ++A +A R KG P Sbjct: 175 NNNLQIDGKITDVNSPYPIDKKFEAFNFHVINIDGNDFDQIEAAFKEA----RKTKGMPT 230 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINE 303 I T + +G S M D A + + +E Sbjct: 231 AIIAKTIKGKGVSFMEDQAGWHGKAPNDE 259 >gi|170734756|ref|YP_001773870.1| transketolase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169820794|gb|ACA95375.1| Transketolase domain protein [Burkholderia cenocepacia MC0-3] Length = 281 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 7/131 (5%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + SD F DG ++G ++E AA Sbjct: 109 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRKGSDAFVYTLFSDGELDEGAIWEGLMSAA 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 W L N+I +++ NNQ A G S ++ A + +F +VDG DI AVK D Sbjct: 169 HWKLDNLIAIVDVNNQQADGPS-TQVMAFEPLVDKLEAFGWYVQRVDGNDIDAVKRAFDD 227 Query: 264 AVAYCRAHKGP 274 A R H P Sbjct: 228 A----RRHDAP 234 >gi|188580838|ref|YP_001924283.1| 2-oxoglutarate dehydrogenase E1 component [Methylobacterium populi BJ001] gi|179344336|gb|ACB79748.1| 2-oxoglutarate dehydrogenase, E1 subunit [Methylobacterium populi BJ001] Length = 1009 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 9/165 (5%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L I+ I NNQ T + + Sbjct: 406 RRKVLPLLIHGDAAFAGQGVVAECFGLSGLKGHRTGGSIHFIINNQIGFTTDPRFSRSSP 465 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P +G D AV A Y + P++I+ML YR GH+ D Sbjct: 466 YPSDVAKMVEAPIFHCNGDDPEAVTFAAKVATEYRQKFGKPVVIDMLCYRRFGHNEGDEP 525 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + + +R + +E K+L+ +GDL + +++ RK Sbjct: 526 AFTQPKMYQRIRKHPTALETYGKKLV-----EQGDLTQEQLDARK 565 >gi|315122389|ref|YP_004062878.1| alpha-ketoglutarate decarboxylase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495791|gb|ADR52390.1| alpha-ketoglutarate decarboxylase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 967 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 9/200 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALWNLNV-- 211 G V A+ L T ++ SD+ + ++ GD A QG V E+ ++ L V Sbjct: 344 GSVRARQDLKTNVSGEESVSLSDRSKFLPIIIHGDAAFIGQGVVSETLALSGLHGYTVAG 403 Query: 212 -IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 I++I NNQ T+ S A + S S IP V+G D +V + AV Y Sbjct: 404 NIHLIVNNQIGFTTNPSSARSSPYSSDIAKSIGIPIFHVNGDDPESVVRVIRMAVLYRMK 463 Query: 271 HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 ++I++L YR GH+ D ++ +RS+ ++ L+ +K S + + Sbjct: 464 FHKSVVIDILCYRRFGHNECDDPSFTQPVMYQRIRSHKSVLQIYADTLVQDKVISTQEFQ 523 Query: 331 EIEMNVRKIINNSVEFAQSD 350 + N R + EF +S+ Sbjct: 524 SLVSNWRTYLEK--EFKESE 541 >gi|110639731|ref|YP_679941.1| 2-oxoglutarate dehydrogenase E1 component [Cytophaga hutchinsonii ATCC 33406] gi|110282412|gb|ABG60598.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Cytophaga hutchinsonii ATCC 33406] Length = 946 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 6/181 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG VYE ++ L I+ + NNQ T A + + Sbjct: 355 LPVLIHGDAAVAAQGIVYEIVQMSKLAGYQTGGTIHFVINNQVGFTTDFEDARSSIYCTD 414 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P M V+G D AV M A Y + I I+M+ YR GH+ SD + Sbjct: 415 VAKIVDAPVMHVNGDDPEAVTFCMRLAAEYRQKFNEDIFIDMVCYRRHGHNESDEPKFTQ 474 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 + N + + +P E ++L+ K ++ R ++ + + Q ++P P Sbjct: 475 PKLYNVISRHANPRELYNQKLIERGDVDAEIAKNMDREFRDMLQDRLN--QVKQKPLPYS 532 Query: 358 L 358 L Sbjct: 533 L 533 >gi|147900249|ref|NP_001084395.1| probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial precursor [Xenopus laevis] gi|82186203|sp|Q6P286|DHTK1_XENLA RecName: Full=Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; AltName: Full=Dehydrogenase E1 and transketolase domain-containing protein 1; Flags: Precursor gi|40352990|gb|AAH64683.1| MGC68840 protein [Xenopus laevis] Length = 927 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 4/167 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 +C+ GD + + QG V E+F ++ L + + I++I NNQ T R + S Sbjct: 334 VCLQVHGDASISGQGIVTETFTLSNLPHYRIGGSIHLIVNNQLGYTTPAERGRSSLYSSD 393 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 G + V+G D V AV Y R + +II++L YR GH+ D + Sbjct: 394 VGKIVGCAVIHVNGDDPEEVLRATRLAVEYQRCFRKDVIIDLLCYRQWGHNELDEPFFTN 453 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +RS + +RL+ +E + EI N+ + Sbjct: 454 PSMYKIIRSRKSIPDVYSERLIAEGLMTEEEATEIRTTYYSKFNDHL 500 >gi|319744143|gb|EFV96516.1| transketolase [Streptococcus agalactiae ATCC 13813] Length = 285 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 5/109 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TGIA+A K S GDG N+GQ +E+ AA L ++I ++ Sbjct: 120 GSLGQGISIATGIAYAQKIENSSYYTYTIVGDGELNEGQCWEAIQFAAHHQLHHLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 +N+ + + +F + +F ++V G DI A+ DKA+ Sbjct: 180 DNKKQLDGLTADICNPGDFVAKFEAFGFDAVRVKGDDIEAI----DKAI 224 >gi|255767453|ref|NP_389819.3| 2-oxoglutarate dehydrogenase E1 component [Bacillus subtilis subsp. subtilis str. 168] gi|321311580|ref|YP_004203867.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus subtilis BSn5] gi|254763409|sp|P23129|ODO1_BACSU RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|225185080|emb|CAB13829.3| 2-oxoglutarate dehydrogenase (E1 subunit) [Bacillus subtilis subsp. subtilis str. 168] gi|320017854|gb|ADV92840.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus subtilis BSn5] Length = 944 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 8/177 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A +G V E+ N+++L V I++I NN T + + + S Sbjct: 356 LAILIHGDAAFPGEGIVAETLNLSSLKGYQVGGAIHIIANNMIGFTTESAESRSTKYASD 415 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 + IP + V+ D A + + AV Y + +I+++ YR GH+ M +P+ Sbjct: 416 LAKGYEIPIVHVNADDPEACLSAVKFAVEYRKTFNKDFLIDLIGYRRYGHNEMDEPST-- 473 Query: 297 TREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 T+ + + H ++Q+ ++L+ +E ++ IE +V K I ++ + S KE Sbjct: 474 TQPMLYDAVRKHPTVKQIFAEKLVKEGVVTEEVVQNIEKSVTKRIEDAYQKVPSKKE 530 >gi|301604552|ref|XP_002931921.1| PREDICTED: probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 803 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 4/167 (2%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 +C+ GD + + QG V E+F ++ L + + I++I NNQ T R + S Sbjct: 332 VCLQVHGDASVSGQGIVTETFTLSNLPHYRIGGSIHLIVNNQLGYTTPAERGRSSLYSSD 391 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 G + V+G D V AV Y R + II+++L YR GH+ D + Sbjct: 392 VGKIVGCAVIHVNGDDPEEVLRATRLAVEYQRCFRKDIIVDLLCYRQWGHNELDEPFFTN 451 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +RS + +RL+ +E + EI + +N+ + Sbjct: 452 PSMYKIIRSRKSIPDIYSERLVAEGLMTEEEASEIRTSYYSKLNDHL 498 >gi|330444426|ref|YP_004377412.1| 2-oxoglutarate dehydrogenase, E1 component [Chlamydophila pecorum E58] gi|328807536|gb|AEB41709.1| 2-oxoglutarate dehydrogenase, E1 component [Chlamydophila pecorum E58] Length = 924 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 9/171 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + V+ GD A + QG VYE+F ++ + + ++++ NN T+ SR S T + + Sbjct: 340 LAVLIHGDAAFSGQGVVYETFQLSQIPGYSTEGTLHIVINNHIGF-TAHSRESRSTPYCT 398 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 IP +V+G D+ A M+ A+ +II+ YR GH+ SD + Sbjct: 399 DIAKMLGIPVFRVNGEDVLACLEAMEHALKVRERFGCDVIIDFCCYRKYGHNESDDPSVT 458 Query: 297 TREEINEMRSNHDPIEQVRKRLL--HNKWASEGDLKEIEMNVRKIINNSVE 345 + +++++ ++++ K L H SE DL IE V ++N + Sbjct: 459 APKLYDQIKTKAS-VQKLFKEFLQTHVPQISEKDLLLIENEVYDLLNREYQ 508 >gi|254254923|ref|ZP_04948240.1| Transketolase [Burkholderia dolosa AUO158] gi|124899568|gb|EAY71411.1| Transketolase [Burkholderia dolosa AUO158] Length = 281 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 7/175 (4%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + SD F DG ++G ++E AA Sbjct: 109 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRKGSDAFVYTLFSDGELDEGAIWEGLMSAA 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 W L N+I +++ NNQ A G S ++ A + +F +VDG DI AVK D Sbjct: 169 HWKLDNLIAIVDVNNQQADGPS-TQIMAFEPLVDKLEAFGWYVQRVDGNDIDAVKRAFDN 227 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSDP--ANYRTREEINEMRSNHDPIEQVRK 316 A + R P I+ T RG + N+ R + +E + D +E R+ Sbjct: 228 ARDHDRPQ--PRIVVCDTKMGRGVPFLEAREKNHFIRVDAHEWKLALDALEAGRR 280 >gi|213405791|ref|XP_002173667.1| 2-oxoglutarate dehydrogenase E1 [Schizosaccharomyces japonicus yFS275] gi|212001714|gb|EEB07374.1| 2-oxoglutarate dehydrogenase E1 [Schizosaccharomyces japonicus yFS275] Length = 1016 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 7/183 (3%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ + AL + I++I NNQ T A + + Sbjct: 406 VLLHGDAAFAAQGVVYETLGLNALPGYSTGGTIHIIVNNQIGFTTDPRFARSTPYCTDIA 465 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + P V+G D AV A + + K II+++ YR GH+ +D + T+ Sbjct: 466 KTIGAPIFHVNGDDTEAVTFVCQLAADWRKTFKSDCIIDIICYRRHGHNETDQPLF-TQP 524 Query: 300 EINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 + + + H ++ ++L+ K S+ D++ + V I+ S E + D + D E Sbjct: 525 RMYKTIAKHPSTYKIYSEQLVEEKTLSKQDIEAHQKKVWDILQQSFE-SSKDYKVDHTEW 583 Query: 359 YSD 361 S+ Sbjct: 584 LSN 586 >gi|157364183|ref|YP_001470950.1| transketolase domain-containing protein [Thermotoga lettingae TMO] gi|157314787|gb|ABV33886.1| Transketolase domain protein [Thermotoga lettingae TMO] Length = 277 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +++G GIA A K R D V GDG ++G V+E+ A+ ++L N+I +++ Sbjct: 112 GALGHGLAVGVGIALAEKMSRKDYKVYVLMGDGELDEGSVWEAAQTASHYSLCNLIGIVD 171 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N+ + N + +F + VDG +I + Sbjct: 172 RNKLQISGPTEEIMKLENLEAKWSTFGWKVLHVDGHNIEQL 212 >gi|320581271|gb|EFW95492.1| Component of the mitochondrial alpha-ketoglutarate dehydrogenase complex [Pichia angusta DL-1] Length = 995 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 7/181 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG VYE+ AL ++VI NNQ T A + S Sbjct: 381 LAVLLHGDAAFAGQGVVYETMGFTALPAYATGGTVHVIVNNQIGFTTDPRFARSTPYPSD 440 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 S N P V+ D+ +V + A + A +I++++ YR GH+ +D ++ Sbjct: 441 IAKSINAPIFHVNADDVESVVYMFNLAAEWRAAFNSDVILDVVGYRKHGHNETDQPSFTQ 500 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS-DKEPDPA 356 + ++ +LL +E D+ E + V + S F +S D +PD Sbjct: 501 PLMYERIAHKKQVLDMYIDKLLKEGTFTEEDINEHKQWVWNTLEES--FGKSKDYKPDSR 558 Query: 357 E 357 E Sbjct: 559 E 559 >gi|111148990|emb|CAJ60670.1| Transketolase (TK) [Frankia alni ACN14a] Length = 580 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 8/134 (5%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G + G G+A A KY + ++ V+C GD +G V+E+ + A+ +NL N+I + Sbjct: 83 GSLGQGLPDGVGVALAGKYLDKVPYRVWVIC-GDSEMAEGSVWEALDKASYYNLSNLIAI 141 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ++ N+ ++KR SF + +DG DI A +D+A+A P Sbjct: 142 VDVNRLGQRGPTELGWDLDTYAKRVESFGARAVVIDGHDI----AAIDEALAGAEDATRP 197 Query: 275 IIIEMLTYRYRGHS 288 +I T++ G S Sbjct: 198 TVILARTHKGAGFS 211 >gi|297570946|ref|YP_003696720.1| 2-oxoglutarate dehydrogenase, E1 subunit [Arcanobacterium haemolyticum DSM 20595] gi|296931293|gb|ADH92101.1| 2-oxoglutarate dehydrogenase, E1 subunit [Arcanobacterium haemolyticum DSM 20595] Length = 1238 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 14/126 (11%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALW---NLNVIYVIENNQYAMGTSVS--RASAQTNF 235 + ++ GD A + QG V+E FN++ L N I+++ NNQ TS S R+S T Sbjct: 654 LPILIHGDAALSGQGVVWEVFNLSQLPAYKNGGTIHIVVNNQIGFTTSPSSGRSSRYTTD 713 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SM 289 +G+ IP V+G D AV A + A +I+++ YR RGH SM Sbjct: 714 IAKGL--QIPIFHVNGDDPEAVARMARMAQEFREAFHKDVIVDISCYRRRGHNEGDDPSM 771 Query: 290 SDPANY 295 + P Y Sbjct: 772 TQPVMY 777 >gi|157692631|ref|YP_001487093.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus pumilus SAFR-032] gi|166918817|sp|A8FE66|ODO1_BACP2 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|157681389|gb|ABV62533.1| oxoglutarate dehydrogenase (succinyl-transferring) E1 subunit [Bacillus pumilus SAFR-032] Length = 944 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 16/181 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A +G V E+ N++ L V I++I NN T + + + S Sbjct: 356 LAILIHGDAAFPGEGIVAETLNLSQLVGYQVGGTIHIIANNMIGFTTESNESRSTKYASD 415 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 F IP + V+ D A A + AV Y + K +I+++ YR GH+ M +P+ Sbjct: 416 LAKGFEIPIVHVNADDPEACLAAVQLAVEYRKRFKKDFLIDLIGYRRYGHNEMDEPST-- 473 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDL-----KEIEMNVRKIINNSVEFAQSDK 351 T+ + + H + K + +K SEG L +EIE V I + + S K Sbjct: 474 TQPMLYDAVRKHKTV----KNIFADKLVSEGLLTKEQREEIEQAVATRIEEAYQKVPSKK 529 Query: 352 E 352 E Sbjct: 530 E 530 >gi|115391169|ref|XP_001213089.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114194013|gb|EAU35713.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 1054 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 84/181 (46%), Gaps = 5/181 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I+++ NNQ T A + S Sbjct: 433 VLLHGDAAFAAQGVVYETMGFHSLPAYSTGGTIHIVVNNQIGFTTDPRFARSTPYCSDIA 492 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 S + P V+G D+ AV A + K ++I+++ YR +GH+ +D ++ Sbjct: 493 KSIDAPVFHVNGDDVEAVNHVCQVAADWRAEFKSDVVIDIVCYRKQGHNETDQPSFTQPL 552 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 + + +++ ++L+ ++ D+ E + V ++N+S + ++ D +P E Sbjct: 553 MYKRIAEQKNQLDKYVEKLIAEGTFTKEDIDEHKKWVWGMLNDSFDRSK-DYQPTSKEWL 611 Query: 360 S 360 + Sbjct: 612 T 612 >gi|18312975|ref|NP_559642.1| transketolase (N terminal section) [Pyrobaculum aerophilum str. IM2] gi|18160473|gb|AAL63824.1| transketolase (N terminal section) [Pyrobaculum aerophilum str. IM2] Length = 267 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +SL G+A K + + GDG ++GQ +ESF +AA +NL N++ +++ Sbjct: 117 GSLGQGISLAVGLALGMKIKGEKGRVYLVVGDGELDEGQSWESFAVAAHYNLTNLVTIVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + + + R S ++ DG +I + A ++KA R P + Sbjct: 177 FNGVQLDGHSEEVLRKGDLAGRFKSLGFEVIEADGHNIGEIIAALEKAERGER----PAV 232 Query: 277 IEMLTYRYRG-HSMSDPANYR 296 I T R RG + D A R Sbjct: 233 IIAKTIRGRGIAQIEDTAKQR 253 >gi|313496382|gb|ADR57748.1| Transketolase family protein [Pseudomonas putida BIRD-1] Length = 282 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 91/221 (41%), Gaps = 15/221 (6%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 IRR + GQ+ G G VG G L + + E +Q Y GH A Sbjct: 20 IRRHALRMGQVQGQGYVGQALGAADLLAVSYFHALRYQPHNPEWEQRDRFYLSIGH-YAI 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FAN 174 + A+ I A + + + G S S + G I G + G GIA Sbjct: 79 ALYAALIEAGVIPLEELETYGSDDSRLPMSGMAAYTPGMEITGGSLGHGLGIAVGACLGL 138 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQ 232 K ++SD DG N+G +E+ A+ W L N+I +I+ NNQ A G S S A Sbjct: 139 KRKKSDSFVYNLLSDGELNEGSTWEAAMSASHWKLNNLIAIIDVNNQQADGYS-SEVLAF 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 R +F +VDG DI A+ A D A R H+G Sbjct: 198 EPIVDRWQAFGWFTQRVDGNDIGALVAAFDAA----RNHQG 234 >gi|296447745|ref|ZP_06889660.1| 2-oxoglutarate dehydrogenase, E1 subunit [Methylosinus trichosporium OB3b] gi|296254722|gb|EFH01834.1| 2-oxoglutarate dehydrogenase, E1 subunit [Methylosinus trichosporium OB3b] Length = 1005 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 9/195 (4%) Query: 164 VSLGTGIAFANKYRRSD--KICVVCF---GDGA-ANQGQVYESFNIAALWNLNV---IYV 214 V LG A ++Y +D + CV+ GD A A QG V E F ++ L ++ Sbjct: 374 VVLGKVRAKQDQYHCADNERRCVMPLLIHGDAAFAGQGVVAECFGLSGLKGHRTGGSVHF 433 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 I NNQ T + + S P V+G D AV A + + + P Sbjct: 434 IINNQIGFTTYPRYSRSSPYPSDVAKMVEAPIFHVNGDDPEAVVYAARVATEFRQQFQKP 493 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 ++I+M YR GH+ D + ++RS+ + ++L+ + D++ I+ Sbjct: 494 VVIDMWCYRRFGHNEGDEPAFTQPLMYKKIRSHKTTFDLYAEKLIGEGLVTRDDVEAIKT 553 Query: 335 NVRKIINNSVEFAQS 349 R+ + +E AQS Sbjct: 554 EWRQRLEQEMEAAQS 568 >gi|302529971|ref|ZP_07282313.1| oxoglutarate dehydrogenase E1 component [Streptomyces sp. AA4] gi|302438866|gb|EFL10682.1| oxoglutarate dehydrogenase E1 component [Streptomyces sp. AA4] Length = 1229 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N+A L ++VI NNQ T+ + + + Sbjct: 650 LPVLMHGDAAFAGQGVVAETLNLALLRGYRTGGTVHVIVNNQVGFTTAPEHSRSSQYATD 709 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV Y +A ++I+++ YR RGH SM+ Sbjct: 710 VAKMIGAPVFHVNGDDPEAAYWVAKLAVDYRQAFHKDVVIDLVCYRRRGHNEGDDPSMTQ 769 Query: 292 PANY 295 PA Y Sbjct: 770 PAMY 773 >gi|162139918|ref|YP_712252.2| transketolase [Frankia alni ACN14a] Length = 624 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 8/134 (5%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G + G G+A A KY + ++ V+C GD +G V+E+ + A+ +NL N+I + Sbjct: 127 GSLGQGLPDGVGVALAGKYLDKVPYRVWVIC-GDSEMAEGSVWEALDKASYYNLSNLIAI 185 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ++ N+ ++KR SF + +DG DI A +D+A+A P Sbjct: 186 VDVNRLGQRGPTELGWDLDTYAKRVESFGARAVVIDGHDI----AAIDEALAGAEDATRP 241 Query: 275 IIIEMLTYRYRGHS 288 +I T++ G S Sbjct: 242 TVILARTHKGAGFS 255 >gi|295669416|ref|XP_002795256.1| 2-oxoglutarate dehydrogenase E1 [Paracoccidioides brasiliensis Pb01] gi|226285190|gb|EEH40756.1| 2-oxoglutarate dehydrogenase E1 [Paracoccidioides brasiliensis Pb01] Length = 1072 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 5/181 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T A + S Sbjct: 449 VLLHGDAAFAAQGVVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRFARSTPYCSDIA 508 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+++ YR +GH+ +D + Sbjct: 509 KAIDAPVFHVNGDDVEALNYVCQMAADWRATFKRDVVIDIVCYRKQGHNETDQPAFTQPL 568 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 + + +++ +L+ K + D++E + V ++N+S + ++ D +P E Sbjct: 569 MYKRIAEQTNQLDKYVDKLIKEKTFTHEDIEEHKKWVWGMLNDSFDRSK-DYQPSSKEWL 627 Query: 360 S 360 + Sbjct: 628 T 628 >gi|311745624|ref|ZP_07719409.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Algoriphagus sp. PR1] gi|126575058|gb|EAZ79408.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Algoriphagus sp. PR1] Length = 930 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 14/181 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE +A L N I+ + NNQ T A + + Sbjct: 348 LPILIHGDAAVAGQGIVYEVTQMADLKGYNTGGTIHFVINNQVGFTTDFDDARSSIYCTD 407 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P + V+G AV A + + I ++M+ YR GH+ SD + Sbjct: 408 VAKIIDAPVIHVNGDSAEAVVFAAKLAAEFRQKFSRDIFVDMVCYRRHGHNESDEPKFTQ 467 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDL-----KEIEMNVRKIINNSVEFAQSDKE 352 E N + + +P E KRL +GDL K+++ R+++ + + + Sbjct: 468 PELYNLISKHPNPREIYVKRL-----TEKGDLDAKIAKQMDAEFRQLLQDRLNMVKEKPL 522 Query: 353 P 353 P Sbjct: 523 P 523 >gi|25010269|ref|NP_734664.1| hypothetical protein gbs0194 [Streptococcus agalactiae NEM316] gi|77407915|ref|ZP_00784666.1| transketolase, N-terminal subunit [Streptococcus agalactiae COH1] gi|77413807|ref|ZP_00789987.1| transketolase, N-terminal subunit [Streptococcus agalactiae 515] gi|23094621|emb|CAD45839.1| Unknown [Streptococcus agalactiae NEM316] gi|77160169|gb|EAO71300.1| transketolase, N-terminal subunit [Streptococcus agalactiae 515] gi|77173462|gb|EAO76580.1| transketolase, N-terminal subunit [Streptococcus agalactiae COH1] Length = 285 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 5/109 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TGIA+A K S GDG N+GQ +E+ AA L ++I ++ Sbjct: 120 GSLGQGISIATGIAYAQKIENSSYYTYTIVGDGELNEGQCWEAIQFAAHHQLHHLIVFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 +N+ + + +F + +F ++V G DI A+ DKA+ Sbjct: 180 DNKKQLDGLTADICNPGDFVAKFEAFGFDAVRVKGDDIEAI----DKAI 224 >gi|51102906|gb|AAT96056.1| transketolase [Pseudomonas viridiflava] Length = 282 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 92/227 (40%), Gaps = 17/227 (7%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 IRR + GQ+ G G VG G L + K E +Q Y GH A Sbjct: 20 IRRHALRMGQVQGQGYVGQALGAADLLAVSYFHAMSYKPEDPEWEQRDRFYLSIGH-YAI 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FAN 174 + A+ I AE+ + G S S + G I G + G GIA Sbjct: 79 ALYAALIEAEIIPLDELETYGSDDSRLPMSGMAAYTPGMEITGGSLGHGLGIAVGACLGL 138 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQ 232 K + S DG N+G +E+ A+ W L N+I +I+ NNQ A G + S A Sbjct: 139 KRKNSASFVYNLLSDGELNEGSTWEAAMSASHWKLDNLIAIIDVNNQQADGHA-SEVLAF 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--PIII 277 R +F +VDG D++A+ A D A R H G P +I Sbjct: 198 EPIVDRWQAFGWFTQRVDGNDLQALVAAFDAA----RQHPGAQPRVI 240 >gi|217978644|ref|YP_002362791.1| 2-oxoglutarate dehydrogenase E1 component [Methylocella silvestris BL2] gi|217504020|gb|ACK51429.1| 2-oxoglutarate dehydrogenase, E1 subunit [Methylocella silvestris BL2] Length = 1018 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/172 (21%), Positives = 76/172 (44%), Gaps = 4/172 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD + A QG + E F ++ L I+ I NNQ TS + + Sbjct: 416 RTKVLPLLLHGDASFAGQGVIAECFGLSGLKGYRTGGSIHFIVNNQIGFTTSPRYSRSSP 475 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P + V+G D AV A+ + + P++++M YR GH+ D Sbjct: 476 YPSDTAKMIEAPIIHVNGDDPEAVVYAAKIAIEFRQKFHKPVVVDMFCYRRFGHNEGDEP 535 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 ++ ++R++ ++ ++LL + G++ +++ + R + E Sbjct: 536 SFTQPIMYKKIRAHRTTLDIYAEKLLAEGVVAPGEISQLQADWRSHLEAEFE 587 >gi|156097843|ref|XP_001614954.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor [Plasmodium vivax SaI-1] gi|148803828|gb|EDL45227.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative [Plasmodium vivax] Length = 1059 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 78/313 (24%), Positives = 123/313 (39%), Gaps = 36/313 (11%) Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL--ACGVDASKIMAELTGRQG- 134 V G L G +A+I M TE M ++R ++L +M E G+ G Sbjct: 280 VDGCETLITGMKALISRAAMVHTESVLMSMSHRGRLNVLFNVLHKPLENMMCEFRGKTGF 339 Query: 135 ---------GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT------GIAFANKYRRS 179 + G + F ++ Y GIV L + G A A +Y + Sbjct: 340 TDNIWGNTGDVKYHLGVEIDHFDEESNRYIHMGIVDNSSHLESVDPILMGQARAQQYYCN 399 Query: 180 DK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRAS 230 DK + + GD + A QG YE+ ++ L + NV I+++ NNQ T A Sbjct: 400 DKEKEKVLPITIHGDASIAGQGIAYETLQMSKLPSYNVGGTIHIVVNNQIGFTTYPVDAR 459 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + +IP + V+ D AV + A+ II+++ YR GH+ Sbjct: 460 SGKYCTDIAKCIDIPIIHVNADDPEAVTYVFELALDIRNKFHIDTIIDIVGYRRFGHNEL 519 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG--DLKEIEMNVRKIINNSVEFAQ 348 D + T + ++ + H+ + L K EG L+E E N KI N E + Sbjct: 520 DMPKF-TNPLLYDIITRHESVLD----LYSKKLIREGVISLEEFEQNKAKIYNLYEEVYE 574 Query: 349 SDKE--PDPAELY 359 K P P E Y Sbjct: 575 KSKSFVPTPKEKY 587 >gi|302689387|ref|XP_003034373.1| hypothetical protein SCHCODRAFT_81665 [Schizophyllum commune H4-8] gi|300108068|gb|EFI99470.1| hypothetical protein SCHCODRAFT_81665 [Schizophyllum commune H4-8] Length = 1001 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 5/122 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG VYE+ + L N V I++I NNQ T A + S Sbjct: 389 MSVLLHGDAAFAGQGVVYETMGMHDLPNYGVGGTIHLIVNNQIGFTTDPRFARSTPYPSD 448 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PANYR 296 S + P V+G ++ AV A Y +K ++++++ YR GH+ +D PA + Sbjct: 449 IAKSIDAPIFHVNGDNVEAVNFVCQLAADYRAKYKRDVVVDIVCYRRHGHNETDQPAFTQ 508 Query: 297 TR 298 R Sbjct: 509 PR 510 >gi|168334260|ref|ZP_02692457.1| Transketolase domain protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 264 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 8/134 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSD-KICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S G G+A KY + D ++ VVC G+G +GQ++E+ AA + L N+ + Sbjct: 108 GSLGQGLSAGNGMAMCGKYDKKDYRVYVVC-GEGEIQEGQIWEAAMTAAHYKLDNLTLFV 166 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 ++N+ + + + S + +F + ++G D A+K +A+A +A+KG P Sbjct: 167 DSNKLQIDGPTEEVMSVGDISAKFSAFGWNTLTINGHDEAAIK----EAIASAKAYKGKP 222 Query: 275 IIIEMLTYRYRGHS 288 I T + +G S Sbjct: 223 TAIVCETIKGKGVS 236 >gi|296393143|ref|YP_003658027.1| 2-oxoglutarate dehydrogenase, E1 subunit [Segniliparus rotundus DSM 44985] gi|296180290|gb|ADG97196.1| 2-oxoglutarate dehydrogenase, E1 subunit [Segniliparus rotundus DSM 44985] Length = 1273 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 10/142 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 R+ + + GDGA A QG V E+ N++ L N+ ++++ NNQ A TS + Sbjct: 683 RQFPVMALALHGDGAFAGQGVVAETLNMSGLTGYNIGGTVHIVVNNQIAFTTSPDNGRSS 742 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH----- 287 + + P V+G D A AV + ++I+++ YR RGH Sbjct: 743 VYCTDVAKTVGAPIFHVNGDDPEAAVWVAQLAVDFRERFHRDVVIDLVCYRQRGHNEGDD 802 Query: 288 -SMSDPANYRTREEINEMRSNH 308 SM+ P Y E +R + Sbjct: 803 PSMTQPTMYDVIENKRSVRKGY 824 >gi|311068612|ref|YP_003973535.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus atrophaeus 1942] gi|310869129|gb|ADP32604.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus atrophaeus 1942] Length = 944 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 8/177 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A +G V E+ N+++L V I++I NN T + + S Sbjct: 356 LAILIHGDAAFPGEGIVAETLNLSSLNGYQVGGAIHIIANNMIGFTTESDESRSTKYASD 415 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 + IP + V+ D A + + AV Y + +I+++ YR GH+ M +P+ Sbjct: 416 LAKGYEIPIVHVNADDPEACLSAVKFAVEYRKKFNKDFLIDLIGYRRYGHNEMDEPST-- 473 Query: 297 TREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 T+ + + H ++Q+ ++L+ SE ++ IE +V K I ++ + + KE Sbjct: 474 TQPMLYDAVRKHPTVKQIFAEKLIKEGQISEETVQNIEQSVAKRIEDAYQKVPAKKE 530 >gi|310814641|ref|YP_003962605.1| 2-oxoglutarate dehydrogenase, E1 component [Ketogulonicigenium vulgare Y25] gi|308753376|gb|ADO41305.1| 2-oxoglutarate dehydrogenase, E1 component [Ketogulonicigenium vulgare Y25] Length = 990 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 17/190 (8%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E F ++ L I+++ NNQ T+ S + + Sbjct: 386 RTKVLPILLHGDAAFAGQGVVAECFGLSGLVGHKTGGTIHIVVNNQIGFTTAPSYSRSSP 445 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-- 291 + + P V+G D AV A + + ++I++ YR GH+ D Sbjct: 446 YPTDIALMVEAPIFHVNGDDPEAVVHAAKVATEFRQLFHKDVVIDIFCYRRFGHNEGDEP 505 Query: 292 ----PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 PA Y+T ++ + + RL+ + EG+++E++ + +N+ E A Sbjct: 506 MFTNPAMYKT------IKGHKTTLTLYTDRLVADGLIPEGEIEEMKARFQSHLNDEFEAA 559 Query: 348 QSDKEPDPAE 357 ++ K P+ A+ Sbjct: 560 KTFK-PNKAD 568 >gi|157826725|ref|YP_001495789.1| 2-oxoglutarate dehydrogenase E1 component [Rickettsia bellii OSU 85-389] gi|157802029|gb|ABV78752.1| alpha-ketoglutarate decarboxylase [Rickettsia bellii OSU 85-389] Length = 927 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L N V++ + NNQ + + +RAS Sbjct: 338 KRSKVKAILVHGDAAFCGQGVVAESLSMSPLAAYNIGGVLHFVINNQLGFTANAADTRAS 397 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV + AV Y + +I+E++ YR GH+ Sbjct: 398 RYSTEFAKIIAA---PILHVNGDDIEAVLKATNIAVEYRQKFGKDVIVEIICYRKYGHNE 454 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N ++S P Sbjct: 455 GDEPMYTQGKMYNIIKSKLTP 475 >gi|262039635|ref|ZP_06012926.1| putative transketolase N- section [Leptotrichia goodfellowii F0264] gi|261746321|gb|EEY33869.1| putative transketolase N- section [Leptotrichia goodfellowii F0264] Length = 283 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 14/166 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV-IE 216 G +G +S+ TGIA A K + GDG N+GQ +E+F A NLN + V ++ Sbjct: 122 GSLGQGISIATGIATALKMDKKSNRVFSIIGDGEINEGQCWEAFQFIAHHNLNNLTVFLD 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + ++ +F + +F + + G DI+ + + K + ++ P+ Sbjct: 182 YNKQQLDGTLEEIIKPFSFENKLKAFGFDTVTIKGDDIKGIYEMVKKPR---KENEKPLF 238 Query: 277 IEMLTYRYRG----HSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 + + T + +G M + + R EE+ + IE+V ++L Sbjct: 239 VILDTVKGQGVEYIEKMKNSHHLRLTEELKK------EIEEVIEKL 278 >gi|73538602|ref|YP_298969.1| transketolase, N-terminal [Ralstonia eutropha JMP134] gi|72121939|gb|AAZ64125.1| Transketolase, N-terminal [Ralstonia eutropha JMP134] Length = 281 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 7/130 (5%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + SD F DG ++G ++E A+ Sbjct: 109 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRKGSDAFVYTLFSDGELDEGAIWEGIQSAS 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 W L N+I +++ NNQ A G S S+ A ++ +F +VDG DI AV A D Sbjct: 169 HWKLDNLIGIVDVNNQQADGPS-SQIMAFEPLVEKLQAFGWFTQRVDGNDIDAVAAAFDT 227 Query: 264 AVAYCRAHKG 273 A R H G Sbjct: 228 A----RKHPG 233 >gi|56693310|ref|NP_001008619.1| probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial [Danio rerio] gi|56269724|gb|AAH86742.1| Dehydrogenase E1 and transketolase domain containing 1 [Danio rerio] Length = 925 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 14/141 (9%) Query: 177 RRSDK-ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASA 231 R DK IC+ GD + + QG V E+F ++ L + V I++I NNQ T R + Sbjct: 326 RPGDKVICLQVHGDASFSGQGIVPETFTLSNLPHYRVGGSIHLIVNNQVGYTTPSERGRS 385 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS--- 288 S G + V+G D V AV Y R + +I+++L YR GH+ Sbjct: 386 SLYCSDVGKMVGCAIIHVNGDDAEEVLRATRLAVEYQRRFRKDVIVDLLCYRQWGHNELD 445 Query: 289 ---MSDPANY---RTREEINE 303 ++PA Y R+R+ I + Sbjct: 446 EPFFTNPAMYKIIRSRKSIPD 466 >gi|320094263|ref|ZP_08026062.1| 2-oxoglutarate dehydrogenase E1 component [Actinomyces sp. oral taxon 178 str. F0338] gi|319978802|gb|EFW10346.1| 2-oxoglutarate dehydrogenase E1 component [Actinomyces sp. oral taxon 178 str. F0338] Length = 1227 Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 15/187 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 I V+ GD A QG V E+ N++ + I+VI +NQ T + + + Sbjct: 627 IPVLIHGDAAFVGQGVVQETLNMSQVEGYKTGGTIHVIVDNQIGFTTGPASGRSTRYPTD 686 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAY-CRAHKGPIIIEMLTYRYRGH------SMS 290 IP + V+ D AV A Y CR HK +II+M+ YR RGH SM+ Sbjct: 687 LAKGLQIPILHVNADDPEAVVRCARLAFQYRCRFHKD-VIIDMVCYRRRGHNEGDDPSMT 745 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 P Y I RS + R RL + + + + E + +I++ + Sbjct: 746 QPVMYSLINRIPSTRSVYVRNLVGRGRLTEEQ--ARASIAKYEAELSRILDETRSGGHEG 803 Query: 351 K-EPDPA 356 + PDP+ Sbjct: 804 RPAPDPS 810 >gi|313903878|ref|ZP_07837267.1| transketolase subunit A [Thermaerobacter subterraneus DSM 13965] gi|313466066|gb|EFR61591.1| transketolase subunit A [Thermaerobacter subterraneus DSM 13965] Length = 284 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 6/140 (4%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G +S+ G+A A K D V GDG +GQV+E+ AA L N Sbjct: 117 GIEASTGSLGQGLSIAAGMALAGKLDGKDYRVFVLLGDGEIQEGQVWEAAMFAAHHRLDN 176 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +I +++ N+Y + +V + + +F ++DG D+ V +++A RA Sbjct: 177 LIAILDYNRYQLDDAVDAIVRVEPLADKWRAFGWDVEEIDGHDLGQVVPALERA----RA 232 Query: 271 HKG-PIIIEMLTYRYRGHSM 289 G P++I T + +G S Sbjct: 233 GTGRPVMIIAHTVKGKGVSF 252 >gi|160152553|sp|Q5PRA2|DHTK1_DANRE RecName: Full=Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; AltName: Full=Dehydrogenase E1 and transketolase domain-containing protein 1; Flags: Precursor Length = 920 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 14/141 (9%) Query: 177 RRSDK-ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASA 231 R DK IC+ GD + + QG V E+F ++ L + V I++I NNQ T R + Sbjct: 321 RPGDKVICLQVHGDASFSGQGIVPETFTLSNLPHYRVGGSIHLIVNNQVGYTTPSERGRS 380 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS--- 288 S G + V+G D V AV Y R + +I+++L YR GH+ Sbjct: 381 SLYCSDVGKMVGCAIIHVNGDDAEEVLRATRLAVEYQRRFRKDVIVDLLCYRQWGHNELD 440 Query: 289 ---MSDPANY---RTREEINE 303 ++PA Y R+R+ I + Sbjct: 441 EPFFTNPAMYKIIRSRKSIPD 461 >gi|88703462|ref|ZP_01101178.1| 2-oxoglutarate dehydrogenase, E1 component [Congregibacter litoralis KT71] gi|88702176|gb|EAQ99279.1| 2-oxoglutarate dehydrogenase, E1 component [Congregibacter litoralis KT71] Length = 951 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 43/243 (17%) Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA--CGVDASKIMAELTGR 132 M +GG+ G + +++GM A+R ++L G + S++ AE GR Sbjct: 253 MQRIGGY-----GAKEIVIGM------------AHRGRLNVLVNILGKNPSELFAEFEGR 295 Query: 133 -----QGGISKGKGGSMHMFSTKN------GFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 G + +G S +M + F H + + V G+ A + RR D Sbjct: 296 ATYESSGDVKYHQGFSSNMMTPGGEVHLALAFNPSHLEIVSPVVEGS--VRARQDRRDDP 353 Query: 182 -----ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQ 232 +V GD A A QG V E+F ++ A ++++ NNQ TS+ S Sbjct: 354 DGHSVWPIVLHGDAAFAGQGVVMETFQMSQTRAYKTGGTVHIVLNNQVGFTTSLREDSRS 413 Query: 233 TNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 T + + P V+ D AV A+ Y K ++I+++ YR RGH+ +D Sbjct: 414 TEYCTDVAKMVQAPIFHVNADDPEAVLFVTQMAIDYRNEFKRDVVIDLVCYRRRGHNEAD 473 Query: 292 -PA 293 PA Sbjct: 474 EPA 476 >gi|307942804|ref|ZP_07658149.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Roseibium sp. TrichSKD4] gi|307773600|gb|EFO32816.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Roseibium sp. TrichSKD4] Length = 994 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 4/146 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS+ + ++ GD A A QG V E F ++AL I+VI NNQ T+ + + Sbjct: 391 RSNVLPLLLHGDAAFAGQGVVAECFGLSALRGHRTGGSIHVIINNQIGFTTNPRFSRSSP 450 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P + V+ D AV A+ Y + P++I+M+ YR GH+ D Sbjct: 451 YPSDMAKVIESPILHVNADDPEAVVFAAKVAIEYRQTFGRPVVIDMICYRRFGHNEGDEP 510 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLL 319 + ++R + ++ RLL Sbjct: 511 AFTQPIMYRKIRKHQTTLQLYSDRLL 536 >gi|222055044|ref|YP_002537406.1| 2-oxoglutarate dehydrogenase, E1 subunit [Geobacter sp. FRC-32] gi|221564333|gb|ACM20305.1| 2-oxoglutarate dehydrogenase, E1 subunit [Geobacter sp. FRC-32] Length = 890 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 14/168 (8%) Query: 178 RSDKIC---------VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGT 224 R D+ C V+ GD A + QG V E+FN++ L ++++ NNQ T Sbjct: 305 RQDRCCDSRGDLVLPVLIHGDAAFSGQGVVAETFNLSQLEGYRTGGTVHIVLNNQIGFTT 364 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + A + + P V G D AV A+ Y +A + +++E++ YR Sbjct: 365 LAADARSSCYATDGAKMVQAPVFHVQGDDPEAVVHATRLALEYRQAFRRDVVVEVICYRR 424 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 GH+ D Y T+ + E N P+ ++ L ++ +L+++ Sbjct: 425 YGHNEGD-EPYFTQPLMYEKIKNRQPLHELYAMKLRDEGVDGAELEKL 471 >gi|116624386|ref|YP_826542.1| alpha-ketoglutarate decarboxylase [Candidatus Solibacter usitatus Ellin6076] gi|116227548|gb|ABJ86257.1| 2-oxoglutarate dehydrogenase E1 component [Candidatus Solibacter usitatus Ellin6076] Length = 1220 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 91/214 (42%), Gaps = 28/214 (13%) Query: 108 AYREHGHILA--CGVDASKIMAELTGR-QGGISKGKG------GSMHMFSTKNG------ 152 A+R +ILA G D +I +E G G ++G G G+ M T NG Sbjct: 522 AHRGRLNILANTVGKDVKQIFSEFEGEIDPGSTQGSGDVKYHLGATGMRRTSNGREIVVS 581 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAAL 206 + A + GI + R D I V+ GD A A QG V E+ N++ L Sbjct: 582 VSPNPSHLEAVDPVVEGIVRPKQDRLGDTERERVIPVLIHGDAAFAGQGVVTETLNLSQL 641 Query: 207 WNLNV---IYVIENNQYAMGT--SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 + I++I NNQ T SR++ + RGV P V+G D A + Sbjct: 642 EGYSTGGTIHLIINNQIGFTTLPDESRSTPYSTDVARGV--QAPIFHVNGDDPEAAIRVV 699 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 A Y + K ++I+M+ YR GH+ D +Y Sbjct: 700 QIAFDYRQQFKTDVVIDMICYRRHGHNEGDDPSY 733 >gi|291484530|dbj|BAI85605.1| alpha-ketoglutarate decarboxylase [Bacillus subtilis subsp. natto BEST195] Length = 944 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 8/177 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A +G V E+ N+++L V I++I NN T + + + S Sbjct: 356 LAILIHGDAAFPGEGIVAETLNLSSLKGYQVGGAIHIIANNMIGFTTESAESRSTKYASD 415 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 + IP + V+ D A + + AV Y + +I+++ YR GH+ M +P+ Sbjct: 416 LAKGYEIPIVHVNADDPEACLSAVKFAVEYRKTFNKDFLIDLIGYRRYGHNEMDEPST-- 473 Query: 297 TREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 T+ + + H ++Q+ ++L+ +E ++ IE +V K I ++ + S KE Sbjct: 474 TQPMLYDAVRKHPTVKQIFAEKLVKEGVLTEEVVQNIEKSVTKRIEDAYQKVPSKKE 530 >gi|242373717|ref|ZP_04819291.1| alpha-ketoglutarate decarboxylase [Staphylococcus epidermidis M23864:W1] gi|242348685|gb|EES40287.1| alpha-ketoglutarate decarboxylase [Staphylococcus epidermidis M23864:W1] Length = 939 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 78/162 (48%), Gaps = 6/162 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ +L +++I NN+ T + T + Sbjct: 357 MPIIIHGDAAYPGQGINFETMNLGSLQGYTTGGSLHIITNNRIGFTTEPVDGRSTTYSTD 416 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P + V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 417 VAKGYDVPILHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRYGHNEMDEPSITN 476 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRK 338 + +R H+ +E + K+L+ + SE ++ EI NV+K Sbjct: 477 PVPYHNIRK-HESVEILYGKKLVEDGIISEDEMNEIIDNVQK 517 >gi|159185304|ref|NP_355572.2| alpha-ketoglutarate decarboxylase [Agrobacterium tumefaciens str. C58] gi|159140562|gb|AAK88357.2| oxoglutarate dehydrogenase E1 component [Agrobacterium tumefaciens str. C58] Length = 998 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 7/185 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 395 RAKVLPLLLHGDAAFAGQGVVAEILGLSGLRGHRVAGTMHFIINNQIGFTTNPAFSRSSP 454 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A Y P++I+M YR GH+ D Sbjct: 455 YPSDVAKMIEAPIFHVNGDDPEAVVYAAKVATEYRMKFHKPVVIDMFCYRRFGHNEGDEP 514 Query: 294 NYRTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 + T+ ++ ++ H + ++ RL+ +EGD ++++ + R + E QS K Sbjct: 515 AF-TQPKMYKVIRGHKTVARIYADRLIAEGLITEGDFEKVKADWRAHLEQEFEAGQSYK- 572 Query: 353 PDPAE 357 P+ A+ Sbjct: 573 PNKAD 577 >gi|150398138|ref|YP_001328605.1| 2-oxoglutarate dehydrogenase E1 component [Sinorhizobium medicae WSM419] gi|150029653|gb|ABR61770.1| 2-oxoglutarate dehydrogenase, E1 subunit [Sinorhizobium medicae WSM419] Length = 998 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 395 RVKVMPLILHGDAAFAGQGVVAEILGLSGLRGHRVGGTVHFIINNQIGFTTNPAFSRSSP 454 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 455 YPSDVAKMIEAPIFHVNGDDPEAVVYAAKVATEFRMKFHKPVVIDMFCYRRFGHNEGDEP 514 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +RS+ ++ RL+ S+G++++++ + R + E QS K P Sbjct: 515 AFTQPRMYKAIRSHKTVVQLYSDRLIAEGLISDGEVEKMKADWRAHLEQEFEAGQSYK-P 573 Query: 354 DPAE 357 + A+ Sbjct: 574 NKAD 577 >gi|54025548|ref|YP_119790.1| putative transketolase [Nocardia farcinica IFM 10152] gi|54017056|dbj|BAD58426.1| putative transketolase [Nocardia farcinica IFM 10152] Length = 731 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 30/193 (15%) Query: 140 KGGSMHMFSTKNG-FYGGHGIVGAQVSLGTGIAFA-NKYRR--------SDKICVVCFGD 189 GG +F +K + +Q+ G+AFA + R +D I + FGD Sbjct: 126 SGGRHKVFGSKAAHIVPQTSTIASQLPRAVGLAFALERAARLGLPTEWPADAIVLCSFGD 185 Query: 190 GAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRAS---AQTNFSKRGV 240 +AN + N AAL + +++V E+N +G SV A ++ G+ Sbjct: 186 ASANHSTATGAIN-AALHTAFQGVPMPILFVCEDN--GLGISVPTPPGWIAHAYGARPGL 242 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTRE 299 + + DG D T +AV + R H+GP + + T R GH+ SD + YR Sbjct: 243 HY----LHADGCDPADALTTCARAVDWVRTHRGPAFLHLSTVRLLGHAGSDAESAYRRPA 298 Query: 300 EI-NEMRSNHDPI 311 E+ ++R DP+ Sbjct: 299 ELAADLR--RDPL 309 >gi|330686141|gb|EGG97760.1| putative 2-oxoglutarate dehydrogenase E1 component [Staphylococcus epidermidis VCU121] Length = 613 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 9/158 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T + + T + Sbjct: 352 MPIIIHGDAAYPGQGINFETMNLGDLKGYSTGGSLHIITNNRIGFTTEPTDGRSTTYSTD 411 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P + V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 412 VAKGYDVPILHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRYGHNEMDEPSITN 471 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 + +R HD +E V + K EG + E EMN Sbjct: 472 PLPYHNIRK-HDSVELVYGK----KLVDEGIISEDEMN 504 >gi|269127876|ref|YP_003301246.1| 2-oxoglutarate dehydrogenase, E1 subunit [Thermomonospora curvata DSM 43183] gi|268312834|gb|ACY99208.1| 2-oxoglutarate dehydrogenase, E1 subunit [Thermomonospora curvata DSM 43183] Length = 1229 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N++ L ++++ NNQ T+ + + + Sbjct: 646 LPVLIHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHIVVNNQVGFTTAPQHSRSSVYATD 705 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 P V+G D A A Y +A K ++I+M+ YR RGH+ SD ++ Sbjct: 706 VARMIQAPIFHVNGDDPEACARVARLAFEYRQAFKKDVVIDMVCYRRRGHNESDNPSF 763 >gi|328715019|ref|XP_001944790.2| PREDICTED: transketolase-like protein 2-like [Acyrthosiphon pisum] Length = 624 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 19/171 (11%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G +S+ G+A+ KY C GDG + +G V+E+ N A+++NL N++ Sbjct: 121 GTGSLGQGLSVACGMAYVGKYFDKSSYRTFCLLGDGESAEGSVWEALNFASVYNLDNLVV 180 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 + + N+ + +R +F + + VDG DI + KA KG Sbjct: 181 IFDINRLGQSGPTPLQHDMEVYRQRVTAFGLNAIVVDGHDIE----ELTKAFHEASITKG 236 Query: 274 -PIIIEMLTYRYRGH-SMSD-------PANYRT---REEIN-EMRSNHDPI 311 P I T++ +G ++ D P N +T EEIN ++R+ P+ Sbjct: 237 KPTAILAKTFKGKGFINIEDAEKWHGTPLNDKTVKVLEEINGQIRNKKMPV 287 >gi|225682695|gb|EEH20979.1| 2-oxoglutarate dehydrogenase E1 [Paracoccidioides brasiliensis Pb03] Length = 1072 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 5/181 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T A + S Sbjct: 449 VLLHGDAAFAAQGVVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRFARSTPYCSDIA 508 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+++ YR +GH+ +D + Sbjct: 509 KAIDAPVFHVNGDDVEALNYVCQMAADWRATFKRDVVIDIVCYRKQGHNETDQPAFTQPL 568 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 + + +++ +L+ K + D++E + V ++N+S + ++ D +P E Sbjct: 569 MYKRIAEQTNQLDKYVDKLIKEKTFTHEDIEEHKKWVWGMLNDSFDRSK-DYQPSSKEWL 627 Query: 360 S 360 + Sbjct: 628 T 628 >gi|124003707|ref|ZP_01688555.1| (pyruvate) Oxoisovalerate Dehydrogenase Alpha and Beta Fusion, putative [Microscilla marina ATCC 23134] gi|123990762|gb|EAY30229.1| (pyruvate) Oxoisovalerate Dehydrogenase Alpha and Beta Fusion, putative [Microscilla marina ATCC 23134] Length = 802 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 63/301 (20%), Positives = 124/301 (41%), Gaps = 48/301 (15%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACG-VDASKIMAELTGRQG----GISKGKG 141 G+E + M + GD YR+ + A G + + A+L +S G+ Sbjct: 51 GKEVAQLAMAQAFRPGDFRSGYYRDQTFMFAIGELTMEQYFAQLYAHTSVEAEPVSAGRM 110 Query: 142 GSMHMFSTK------------NGFYGGHGI--VGAQVSLGTGIAFANK-YRRSDKICVVC 186 + H F T+ N + I Q+ GIA+A+K YR++ + V Sbjct: 111 MNGH-FGTRLLDDEGKWKNQSNAYNASADISPTAGQMPRILGIAYASKLYRQNPDLQVFT 169 Query: 187 -------------FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT--------- 224 G+ + ++G YE+ N A + + ++ + +++Y + Sbjct: 170 DFSDQGNEISFGTIGNASTSEGLFYETINAAGVLQVPMLMSVWDDEYGISVPKEYHTTKG 229 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML-TYR 283 S+S+ A +K+ + I V G D A+ T KA CR P+++ ++ + Sbjct: 230 SISKVLAGFKRTKKEQGYEI--FTVKGWDYEALFETYQKAAEICRTEHVPVLVHVIEVTQ 287 Query: 284 YRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 +GHS S Y+ ++ + E D I+++R+ ++ +AS ++ IE + N Sbjct: 288 PQGHSTSGSHERYKPKDRL-EWEKEFDCIKKMREWIVTQGYASNDEVDTIEKTAKTNAKN 346 Query: 343 S 343 + Sbjct: 347 A 347 >gi|46203354|ref|ZP_00051633.2| COG0567: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Magnetospirillum magnetotacticum MS-1] Length = 680 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 9/165 (5%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L I+ I NNQ T + + Sbjct: 117 RRKVLPLLIHGDAAFAGQGVVAECFGLSGLKGHRTGGSIHFIINNQIGFTTDPRFSRSSP 176 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P +G D AV A Y + P++I+ML YR GH+ D Sbjct: 177 YPSDVAKMVEAPIFHCNGDDPEAVTFAAKVATEYRQKFGKPVVIDMLCYRRFGHNEGDEP 236 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + + +R + +E K+L+ +GDL + +++ RK Sbjct: 237 AFTQPKMYQRIRKHPTVLETYGKKLV-----EQGDLTQEQLDARK 276 >gi|331004846|ref|ZP_08328263.1| 2-oxoglutarate dehydrogenase E1 component [gamma proteobacterium IMCC1989] gi|330421300|gb|EGG95549.1| 2-oxoglutarate dehydrogenase E1 component [gamma proteobacterium IMCC1989] Length = 944 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 21/184 (11%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG +HM F H + + V +G+ A + RR D + + GD A + Q Sbjct: 316 GGELHM---AMAFNPSHLEIASPVVVGS--VRARQDRRKDTTGDIVVPISIHGDAAFSGQ 370 Query: 195 GQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVD 250 G V+E+F ++ A ++++ NNQ T+ + T + F P V+ Sbjct: 371 GVVFETFQMSQTRAYKTGGTLHIVINNQVGFTTNNPDDARSTYYCTDVAKFVGAPIFHVN 430 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD------PANYRTREEINEM 304 G D AV AV Y K ++I+++ YR RGH+ +D P Y+ +++ Sbjct: 431 GDDPEAVMFVTQLAVDYRYEFKKDVVIDLVCYRRRGHNETDEPSSTQPLMYQVIKKLKTT 490 Query: 305 RSNH 308 R+ + Sbjct: 491 RTKY 494 >gi|293401634|ref|ZP_06645776.1| transketolase, N- subunit [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304892|gb|EFE46139.1| transketolase, N- subunit [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 274 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 11/146 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A AN+ + GDG +G+V+E+ AA + L N+ +I+ Sbjct: 115 GSLGQGISAAVGMALANRLDGNTHRIYALLGDGECQEGEVWEALMSAAHYQLDNLCVIID 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH--KG- 273 +N + V + + ++F +Q++G D+ A+K A+ +AH KG Sbjct: 175 HNGLQIDGKVDDVMKVDSLYDKAIAFGCHALQINGHDMDAIK------TAFVQAHQIKGK 228 Query: 274 PIIIEMLTYRYRGHS-MSDPANYRTR 298 P +I T + +G S M + A + + Sbjct: 229 PTVIIADTIKGKGVSFMENEAGWHGK 254 >gi|46200720|ref|ZP_00207814.1| COG3959: Transketolase, N-terminal subunit [Magnetospirillum magnetotacticum MS-1] Length = 285 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 14/129 (10%) Query: 143 SMHMFSTKNGFYGGH-------------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGD 189 ++ F K+ GGH G +G +S+G G+A A + ++ D V GD Sbjct: 100 TLGTFCKKDSILGGHPEANKIPGVEASTGALGHGLSIGVGMALAARVQKRDSRVFVVMGD 159 Query: 190 GAANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ 248 G N+G V+E+ A L N++ +++ N+ ++ +F ++ Sbjct: 160 GEINEGSVWEAAMSAGKHRLSNLVAIVDYNKIQSYAFTDEVQPLDPLPEKWAAFGFDAIE 219 Query: 249 VDGMDIRAV 257 VDG D+ A+ Sbjct: 220 VDGHDVEAL 228 >gi|297835124|ref|XP_002885444.1| 1-deoxyxylulose-5-phosphate synthase [Arabidopsis lyrata subsp. lyrata] gi|297331284|gb|EFH61703.1| 1-deoxyxylulose-5-phosphate synthase [Arabidopsis lyrata subsp. lyrata] Length = 655 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 33/187 (17%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ G M NG G G G +S G G+A + + Sbjct: 130 ILTGRRGKMKTIRQTNGLSGYTNRRESEHDSFGTGHSSTTISAGLGMAVGRDLKGMNNSV 189 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY----------------AMGTSVS 227 V GDGA GQ YE+ N A + ++I ++ +N+ A+ ++S Sbjct: 190 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPTPPVGALSCALS 249 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + T F + G + P VDG +I + + ++K + GP++I ++T + RG+ Sbjct: 250 SGTGSTLFEELGFHYVGP---VDGHNIDDLVSILEKVKS--TKPIGPVLIHVVTEKGRGY 304 Query: 288 SMSDPAN 294 ++ A+ Sbjct: 305 PYAERAD 311 >gi|163816064|ref|ZP_02207434.1| hypothetical protein COPEUT_02244 [Coprococcus eutactus ATCC 27759] gi|158448874|gb|EDP25869.1| hypothetical protein COPEUT_02244 [Coprococcus eutactus ATCC 27759] Length = 275 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 7/144 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A A K + D GDG +GQ++E+ A L N+ +++ Sbjct: 115 GSLGQGLSVAVGMALAAKMQGKDYRTYCLCGDGEIQEGQIWEAAMFAGHRKLDNLCVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + +V + ++ +FN + ++G D + D+A A ++HKG P Sbjct: 175 NNNLQIDGTVEDVCSPYPIDEKFKAFNFHVININGNDFDEI----DRAFAEAKSHKGEPT 230 Query: 276 IIEMLTYRYRGHS-MSDPANYRTR 298 I T + +G S M D A + + Sbjct: 231 AIIAHTIKGKGVSFMEDKAGWHGK 254 >gi|226290128|gb|EEH45612.1| 2-oxoglutarate dehydrogenase E1 [Paracoccidioides brasiliensis Pb18] Length = 1072 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 5/181 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T A + S Sbjct: 449 VLLHGDAAFAAQGVVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRFARSTPYCSDIA 508 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+++ YR +GH+ +D + Sbjct: 509 KAIDAPVFHVNGDDVEALNYVCQMAADWRATFKRDVVIDIVCYRKQGHNETDQPAFTQPL 568 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 + + +++ +L+ K + D++E + V ++N+S + ++ D +P E Sbjct: 569 MYKRIAEQTNQLDKYVDKLIKEKTFTHEDIEEHKKWVWGMLNDSFDRSK-DYQPSSKEWL 627 Query: 360 S 360 + Sbjct: 628 T 628 >gi|323453278|gb|EGB09150.1| hypothetical protein AURANDRAFT_37323 [Aureococcus anophagefferens] Length = 1023 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESF---NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG VYE+ N+ A I+VI NNQ + + S Sbjct: 388 LPVIIHGDAAFAGQGVVYETMQMVNLEAYKTGGTIHVICNNQVGFTCLPEQGRSTMYSSD 447 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 G +F P V+ D AV + AVA+ K +II+++ YR GH+ D + Sbjct: 448 LGKAFGCPIFHVNADDPEAVCRVFETAVAWRHEFKTDVIIDLIGYRKFGHNEIDEPTF 505 >gi|260893697|ref|YP_003239794.1| Transketolase domain protein [Ammonifex degensii KC4] gi|260865838|gb|ACX52944.1| Transketolase domain protein [Ammonifex degensii KC4] Length = 279 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 57/113 (50%), Gaps = 2/113 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A A K R S V GDG +GQV+E+ A + L N++ +++ Sbjct: 124 GSLGQGLSVGVGMALAAKLRGSGCRVFVLLGDGECQEGQVWEAAMAAGHYRLNNLVAIVD 183 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 N+ + + A + + +FN +++DG + + +++ V Y + Sbjct: 184 RNRLQIDGETEKVMALEPLAAKWRAFNWSVIEIDGHNFEEIVPALER-VGYAQ 235 >gi|193216266|ref|YP_001997465.1| alpha-ketoglutarate decarboxylase [Chloroherpeton thalassium ATCC 35110] gi|193089743|gb|ACF15018.1| 2-oxoglutarate dehydrogenase, E1 subunit [Chloroherpeton thalassium ATCC 35110] Length = 1233 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 17/197 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQ 219 G+A A + R DK + ++ GD A A QG V E+ N++ L I++I NNQ Sbjct: 632 GVARAKQDRAGDKEGKKVMPLLLHGDAAFAGQGVVAETLNLSQLTGYCTNGTIHLIINNQ 691 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD----IRAVKATMDKAVAYCRAHKGPI 275 T+ + A + + P V+G D IR + +D + + R + Sbjct: 692 IGFTTTPAEARSSRYATDVAKMVQAPVFHVNGDDPEACIRVARMALDYRLRFGRD----V 747 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +I+M+ YR GH+ D Y +++ E +RLL SE +L ++ Sbjct: 748 VIDMICYRRHGHNEGDDPAYTQPVLYKKIKEKKPVNELYAERLLKEGIISEAELAQMYGE 807 Query: 336 VRKIINNSVEFAQSDKE 352 ++ ++ + E A+ E Sbjct: 808 IKAELDKAYEEAKQTSE 824 >gi|119873261|ref|YP_931268.1| transketolase domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119674669|gb|ABL88925.1| transketolase subunit A [Pyrobaculum islandicum DSM 4184] Length = 267 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A + R + GDG ++GQ +ESF +AA + L N++ +++ Sbjct: 117 GSLGQGISMAVGLALGLRLRGEPGRVYLVTGDGELDEGQSWESFAVAAHYGLNNLVTIVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + + + R S +++G DI + T++KA R P+I Sbjct: 177 LNGVQLDGHCEEVLRKGDLAARFRSLGFEVFEINGHDIGQIVETLEKAEKSARP---PVI 233 Query: 277 IEMLTYRYRG-HSMSDPANYR 296 I T R RG + D A R Sbjct: 234 IAK-TIRGRGVPPIEDTAKQR 253 >gi|51102951|gb|AAT96100.1| transketolase [Pseudomonas viridiflava] Length = 282 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 92/227 (40%), Gaps = 17/227 (7%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 IRR + GQ+ G G VG G L + K E +Q Y GH A Sbjct: 20 IRRHALRMGQVQGQGYVGQALGAADLLAVSYFHAMSYKSEDPEWEQRDRFYLSIGH-YAI 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FAN 174 + A+ I AE+ + G S S + G I G + G GIA Sbjct: 79 ALYAALIEAEIIPLDELETYGSDDSRLPMSGMAAYTPGMEITGGSLGHGLGIAVGACLGL 138 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQ 232 K + S DG N+G +E+ A+ W L N+I +I+ NNQ A G + S A Sbjct: 139 KRKNSASFVYNMLSDGELNEGSTWEAAMSASHWKLDNLIAIIDVNNQQADGHA-SEVLAF 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--PIII 277 R +F +VDG D++A+ A D A R H G P +I Sbjct: 198 EPIVDRWQAFGWFTQRVDGNDLQALVAAFDAA----RQHPGAQPRVI 240 >gi|319938358|ref|ZP_08012753.1| transketolase [Coprobacillus sp. 29_1] gi|319806446|gb|EFW03110.1| transketolase [Coprobacillus sp. 29_1] Length = 276 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G ++LG GIA A K D V GDG +G V+ES AA + L N+ +++ Sbjct: 114 GALGHGLALGVGIAIAAKKMNRDYRTYVLMGDGELAEGSVWESAMAAAFYQLDNLCTIVD 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N+ + + A N ++ SF +++DG + + + +KA Sbjct: 174 RNRLQISGNTEDIMALENLKEKWQSFGFEVLEIDGNNYHQIIDSFEKA 221 >gi|240138207|ref|YP_002962679.1| 2-oxoglutarate dehydrogenase complex, E1 component, 2-oxoglutarate decarboxylase, thiamine binding [Methylobacterium extorquens AM1] gi|22652788|gb|AAN03815.1|AF497852_1 2-oxoglutarate dehydrogenase E1 component [Methylobacterium extorquens AM1] gi|240008176|gb|ACS39402.1| 2-oxoglutarate dehydrogenase complex, E1 component, 2-oxoglutarate decarboxylase, thiamine binding [Methylobacterium extorquens AM1] Length = 996 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 14/179 (7%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E ++ L I+ I NNQ T + + Sbjct: 393 RRRVLPLLIHGDAAFAGQGVVAECLGLSGLKGHRTGGSIHFIINNQIGFTTDPRFSRSSP 452 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P +G D AV AV Y + P++I+ML YR GH+ D Sbjct: 453 YPSDVAKMVEAPIFHCNGDDPEAVTFAAKVAVEYRQKFGKPVVIDMLCYRRFGHNEGDEP 512 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK-----IINNSVEFA 347 + + +R + +E K+L+ ++GDL + +++ RK I+ + +E A Sbjct: 513 AFTQPKMYQRIRKHPTALETYGKKLV-----AQGDLTQEQLDARKAEFRAILESELEVA 566 >gi|68536459|ref|YP_251164.1| alpha-ketoglutarate decarboxylase [Corynebacterium jeikeium K411] gi|68264058|emb|CAI37546.1| 2-oxoglutarate dehydrogenase E1 component [Corynebacterium jeikeium K411] Length = 1239 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 19/180 (10%) Query: 169 GIAFANKYRRSDKICVVCF---GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYA 221 GIA A + + +K V+ GD A G V E+ N+A L V +++I NNQ Sbjct: 641 GIARAKQDQLHEKHTVMPLLLHGDAAFTGLGIVQETINLARLEAYEVGGTVHIIVNNQIG 700 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 T+ + + F+ P V+G D AV AV Y + I+++T Sbjct: 701 FTTTPDAGRSTHYATDLAKGFDSPVFHVNGDDPEAVVWVARLAVDYRNRFGKDVFIDLVT 760 Query: 282 YRYRGH------SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 YR RGH SM+ P Y+ I E +S+ D Q + LL +E D++ ++ + Sbjct: 761 YRRRGHNEADDPSMTQPLMYKL---IGETKSSRD---QYTETLLGRGDLTEEDIERVQRD 814 >gi|254560767|ref|YP_003067862.1| 2-oxoglutarate dehydrogenase complex, E1 component, 2-oxoglutarate decarboxylase [Methylobacterium extorquens DM4] gi|254268045|emb|CAX23916.1| 2-oxoglutarate dehydrogenase complex, E1 component, 2-oxoglutarate decarboxylase, thiamine binding [Methylobacterium extorquens DM4] Length = 996 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 14/179 (7%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E ++ L I+ I NNQ T + + Sbjct: 393 RRRVLPLLIHGDAAFAGQGVVAECLGLSGLKGHRTGGSIHFIINNQIGFTTDPRFSRSSP 452 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P +G D AV AV Y + P++I+ML YR GH+ D Sbjct: 453 YPSDVAKMVEAPIFHCNGDDPEAVTFAAKVAVEYRQKFGKPVVIDMLCYRRFGHNEGDEP 512 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK-----IINNSVEFA 347 + + +R + +E K+L+ ++GDL + +++ RK I+ + +E A Sbjct: 513 AFTQPKMYQRIRKHPTALETYGKKLV-----AQGDLTQEQLDARKAEFRAILESELEVA 566 >gi|227823642|ref|YP_002827615.1| 2-oxoglutarate dehydrogenase E1 component [Sinorhizobium fredii NGR234] gi|227342644|gb|ACP26862.1| 2-oxoglutarate dehydrogenase, E1 component [Sinorhizobium fredii NGR234] Length = 998 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG + E ++ L V ++ I NNQ T+ + + + Sbjct: 395 RVKVMPLLLHGDAAFAGQGVISEILGLSGLRGHRVAGTVHFIINNQIGFTTNPAFSRSSP 454 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++++M YR GH+ D Sbjct: 455 YPSDVAKMIEAPIFHVNGDDPEAVVYAAKVATEFRMKFHKPVVVDMFCYRRFGHNEGDEP 514 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + + +R++ ++ +RL+ +EGD+++++ + R + E QS K P Sbjct: 515 AFTQPKMYKAIRAHKTVVQVYSQRLVAEGLMNEGDVEKMKADWRAHLEQEFEAGQSYK-P 573 Query: 354 DPAE 357 + A+ Sbjct: 574 NKAD 577 >gi|260577589|ref|ZP_05845528.1| 2-oxoglutarate dehydrogenase, E1 component [Corynebacterium jeikeium ATCC 43734] gi|258604313|gb|EEW17551.1| 2-oxoglutarate dehydrogenase, E1 component [Corynebacterium jeikeium ATCC 43734] Length = 1239 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 19/180 (10%) Query: 169 GIAFANKYRRSDKICVVCF---GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYA 221 GIA A + + +K V+ GD A G V E+ N+A L V +++I NNQ Sbjct: 641 GIARAKQDQLHEKHTVMPLLLHGDAAFTGLGIVQETINLARLEAYEVGGTVHIIVNNQIG 700 Query: 222 MGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 T+ + + F+ P V+G D AV AV Y + I+++T Sbjct: 701 FTTTPDAGRSTHYATDLAKGFDSPVFHVNGDDPEAVVWVARLAVDYRNRFGKDVFIDLVT 760 Query: 282 YRYRGH------SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 YR RGH SM+ P Y+ I E +S+ D Q + LL +E D++ ++ + Sbjct: 761 YRRRGHNEADDPSMTQPLMYKL---IGETKSSRD---QYTETLLGRGDLTEEDIERVQRD 814 >gi|92116163|ref|YP_575892.1| 2-oxoglutarate dehydrogenase E1 component [Nitrobacter hamburgensis X14] gi|91799057|gb|ABE61432.1| 2-oxoglutarate dehydrogenase E1 component [Nitrobacter hamburgensis X14] Length = 989 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 4/173 (2%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 +R + ++ GD A A QG V E F ++ L I+ I NNQ T + + Sbjct: 386 QRDSVLPLLMHGDAAFAGQGVVAECFALSDLKGYRTGGSIHFIVNNQIGFTTYPRYSRSS 445 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 S + P V+G D AV A+ + + P++I+M YR GH+ D Sbjct: 446 PYPSDLAKMIDAPIFHVNGDDPEAVVFAAKVAIEFRQKFHKPVVIDMFCYRRHGHNEGDE 505 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 ++ ++ ++ +E KRL ++G++++++ + R ++ E Sbjct: 506 PSFTNPMMYKKIAAHPSTLELYAKRLSTEGVITDGEIEKLKADWRARLDAEFE 558 >gi|332977247|gb|EGK14042.1| 2-oxoglutarate dehydrogenase E1 component [Psychrobacter sp. 1501(2011)] Length = 959 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 24/210 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQ 219 G A + RR D + +V GD A A QG V E+F ++ A ++++ NNQ Sbjct: 342 GSVRARQVRRDDTDGNLVLPLVVHGDAAIAAQGVVQETFQMSQTRAYTTGGTVHIVINNQ 401 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS + T + + + P + V+G D AV A+ Y I+I+ Sbjct: 402 VGFTTSRQEDARSTEYCTDIAKMVHAPILHVNGDDPEAVVFAAQMALDYRHEFHKDIVID 461 Query: 279 MLTYRYRGHSMSD------PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 + YR GH+ +D P Y +++ R+ Q ++LL SEG+ K + Sbjct: 462 LFCYRRNGHNEADEPSATQPLMYAIIKKLPTTRT------QYAQKLLAEGVISEGEDKTL 515 Query: 333 EMNVRKIINNSVEFAQS-DKEPDPAELYSD 361 E R+ ++ S +EP+ ELY D Sbjct: 516 EDEYREALDKGEYVVNSLVREPN-KELYVD 544 >gi|319892415|ref|YP_004149290.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus pseudintermedius HKU10-03] gi|317162111|gb|ADV05654.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus pseudintermedius HKU10-03] Length = 928 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/171 (22%), Positives = 82/171 (47%), Gaps = 18/171 (10%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S+ + ++ GD A QG +E+ N+ L + +++I NN+ T + T Sbjct: 343 SNAMPIIVHGDAAYPGQGVNFETMNLGNLDGFSTGGTLHIITNNRIGFTTDPEDGRSTTY 402 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------S 288 + +++P M V+ ++ A +D A+ + +A ++I+++ YR GH + Sbjct: 403 ATDVAKGYDVPIMHVNADNVEATIEAIDIAMEFRKAFNKDVVIDLVGYRRFGHNEMDEPT 462 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRK 338 +++P Y+ ++ HD E + K+L+ S+ ++ E+ NV+K Sbjct: 463 LTNPLPYKQIQK-------HDTSEVIYGKQLIDEGIMSQDEMDEVMENVQK 506 >gi|296330467|ref|ZP_06872946.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674747|ref|YP_003866419.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus subtilis subsp. spizizenii str. W23] gi|296152364|gb|EFG93234.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412991|gb|ADM38110.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus subtilis subsp. spizizenii str. W23] Length = 944 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 89/183 (48%), Gaps = 8/183 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A +G V E+ N+++L V I++I NN T + + + S Sbjct: 356 LAILIHGDAAFPGEGIVAETLNLSSLKGYQVGGAIHIIANNMIGFTTESAESRSTNYASD 415 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 + IP + V+ D A + + AV Y + +I+++ YR GH+ M +P+ Sbjct: 416 LAKGYEIPIVHVNADDPEACLSAVKFAVEYRKTFNKDFLIDLIGYRRYGHNEMDEPST-- 473 Query: 297 TREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 T+ + + H ++Q+ ++L++ +E ++ IE +V K I ++ + + KE Sbjct: 474 TQPMLYDAVRKHPTVKQIFAEKLVNEGVLTEEVVQNIEKSVTKRIEDAYQKVPAKKEHTA 533 Query: 356 AEL 358 +E+ Sbjct: 534 SEI 536 >gi|163851073|ref|YP_001639116.1| alpha-ketoglutarate decarboxylase [Methylobacterium extorquens PA1] gi|163662678|gb|ABY30045.1| 2-oxoglutarate dehydrogenase, E1 subunit [Methylobacterium extorquens PA1] Length = 996 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E ++ L I+ I NNQ T + + Sbjct: 393 RRRVLPLLIHGDAAFAGQGVVAECLGLSGLKGHRTGGSIHFIINNQIGFTTDPRFSRSSP 452 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P +G D AV AV Y + P++I+ML YR GH+ D Sbjct: 453 YPSDVAKMVEAPIFHCNGDDPEAVTFAAKVAVEYRQKFGKPVVIDMLCYRRFGHNEGDEP 512 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + + +R + +E K+L+ ++GDL + +++ RK Sbjct: 513 AFTQPKMYQRIRKHPTALETYGKKLV-----AQGDLTQEQLDARK 552 >gi|218529903|ref|YP_002420719.1| 2-oxoglutarate dehydrogenase E1 component [Methylobacterium chloromethanicum CM4] gi|218522206|gb|ACK82791.1| 2-oxoglutarate dehydrogenase, E1 subunit [Methylobacterium chloromethanicum CM4] Length = 996 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E ++ L I+ I NNQ T + + Sbjct: 393 RRRVLPLLIHGDAAFAGQGVVAECLGLSGLKGHRTGGSIHFIINNQIGFTTDPRFSRSSP 452 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P +G D AV AV Y + P++I+ML YR GH+ D Sbjct: 453 YPSDVAKMVEAPIFHCNGDDPEAVTFAAKVAVEYRQKFGKPVVIDMLCYRRFGHNEGDEP 512 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + + +R + +E K+L+ ++GDL + +++ RK Sbjct: 513 AFTQPKMYQRIRKHPTALETYGKKLV-----AQGDLTQEQLDARK 552 >gi|94496914|ref|ZP_01303488.1| 2-oxoglutarate dehydrogenase, E1 component [Sphingomonas sp. SKA58] gi|94423590|gb|EAT08617.1| 2-oxoglutarate dehydrogenase, E1 component [Sphingomonas sp. SKA58] Length = 931 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 5/137 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V+E + + N I+ + NNQ TS A + S Sbjct: 329 LPVLIHGDAAFAGQGIVWECLGFSGIRGYNTGGCIHFVVNNQVGFTTSPQFARSSPYPSD 388 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 P + V+G D AV A+ Y + I+I+M YR GH+ D ++ Sbjct: 389 VAKGVQAPILHVNGDDPEAVTFACKLAIEYRQTFHRDIVIDMWCYRRFGHNEGDEPSFTQ 448 Query: 298 REEINEMRSNHDPIEQV 314 + ++R H P+ V Sbjct: 449 PQMYAKIR-QHPPVSDV 464 >gi|323464482|gb|ADX76635.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus pseudintermedius ED99] Length = 928 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 38/171 (22%), Positives = 82/171 (47%), Gaps = 18/171 (10%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S+ + ++ GD A QG +E+ N+ L + +++I NN+ T + T Sbjct: 343 SNAMPIIVHGDAAYPGQGVNFETMNLGNLDGFSTGGTLHIITNNRIGFTTDPEDGRSTTY 402 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------S 288 + +++P M V+ ++ A +D A+ + +A ++I+++ YR GH + Sbjct: 403 ATDVAKGYDVPIMHVNADNVEATIEAIDIAMEFRKAFNKDVVIDLVGYRRFGHNEMDEPT 462 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRK 338 +++P Y+ ++ HD E + K+L+ S+ ++ E+ NV+K Sbjct: 463 LTNPLPYKQIQK-------HDTSEVIYGKQLIDEGIMSQDEMDEVMENVQK 506 >gi|294012418|ref|YP_003545878.1| 2-oxoglutarate dehydrogenase E1 component [Sphingobium japonicum UT26S] gi|292675748|dbj|BAI97266.1| 2-oxoglutarate dehydrogenase E1 component [Sphingobium japonicum UT26S] Length = 936 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 9/144 (6%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRAS 230 R + V+ GD A A QG V+E + + N I+ I NNQ TS SR S Sbjct: 329 RHEQVLPVLIHGDAAFAGQGIVWECLGFSGVSGYNTGGCIHFIVNNQIGFTTSPQFSRGS 388 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + +GV P + ++G D AV A+ Y + I+I+M YR GH+ Sbjct: 389 PYPSDVAKGV--QAPILHINGDDPEAVTFACKLAMEYRQTFHRDIVIDMWCYRRFGHNEG 446 Query: 291 DPANYRTREEINEMRSNHDPIEQV 314 D ++ + ++R H P+ V Sbjct: 447 DEPSFTQPQMYAKIR-QHPPVSDV 469 >gi|172063943|ref|YP_001811594.1| transketolase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171996460|gb|ACB67378.1| Transketolase domain protein [Burkholderia ambifaria MC40-6] Length = 281 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 7/131 (5%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + SD F DG ++G ++E AA Sbjct: 109 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRKGSDAFVYTLFSDGELDEGAIWEGLMSAA 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 W L N+I +++ NNQ A G S ++ A + +F +VDG D+ AVK D Sbjct: 169 HWKLDNLIAIVDVNNQQADGPS-TQVMAFEPLVDKLEAFGWYVQRVDGNDVDAVKRAFDN 227 Query: 264 AVAYCRAHKGP 274 A R H P Sbjct: 228 A----RGHAKP 234 >gi|319404897|emb|CBI78498.1| alpha-ketoglutarate dehydrogenase [Bartonella rochalimae ATCC BAA-1498] Length = 999 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 15/189 (7%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A + QG + E+F ++ L V I+VI NNQ T+ + + Sbjct: 396 RSKVLPLLIHGDAAFSGQGVIQETFGLSDLRGYRVAGSIHVIINNQIGFTTNPRFSRSSP 455 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV A + + P++I+M YR GH+ D Sbjct: 456 YPSDVAKMIDAPIFHVNGDDPEAVVFVAKVATEFRQIFHKPVVIDMFCYRRYGHNEGDEP 515 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG--DLKEIEMN---VRKIINNSVEFAQ 348 ++ T+ + + NH Q L N+ +EG D +E+E R + + E + Sbjct: 516 SF-TQPLMYKAIRNHKTTVQ----LYSNQLIAEGVIDPQEVEQKKQMWRDKLESEFEASA 570 Query: 349 SDKEPDPAE 357 S K PD A+ Sbjct: 571 SYK-PDKAD 578 >gi|118470040|ref|YP_885985.1| benzoylformate decarboxylase [Mycobacterium smegmatis str. MC2 155] gi|118171327|gb|ABK72223.1| benzoylformate decarboxylase [Mycobacterium smegmatis str. MC2 155] Length = 537 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 22/113 (19%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN---- 208 F G G +G V GIA ++ R D+ V GDG+ ++I A+W Sbjct: 398 FATGSGGIGWGVPAAVGIALGDRARGVDRTVVATIGDGSFQ-------YSIQAIWTAAQH 450 Query: 209 -LNVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 L +++V+ N +YA+ S F+ + N+PG+Q+ G+DI ++ A Sbjct: 451 KLPIVFVVLRNGEYAILKS---------FADLEKTPNVPGLQLPGLDISSIAA 494 >gi|302205938|gb|ADL10280.1| Putative 2-oxoglutarate dehydrogenase E1 component [Corynebacterium pseudotuberculosis C231] gi|308276173|gb|ADO26072.1| Putative 2-oxoglutarate dehydrogenase E1 component [Corynebacterium pseudotuberculosis I19] Length = 1228 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 9/179 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A G V E+ N+A L V ++++ NNQ T+ A + + Sbjct: 641 MPIMLHGDAAFAGLGIVQETLNLAQLRGYTVGGTVHIVVNNQIGFTTTPDSARSSHYATD 700 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 ++ P V+G D AV A Y R + I+M++YR RGH+ +D + Sbjct: 701 LAKAYGCPVFHVNGDDPEAVVWVGKLATEYRREFGKDVFIDMISYRRRGHNEADDPSMTQ 760 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR---KIINNSVEFAQSDKEP 353 E + + EQ ++ LL + D ++++ + + I N V+ +S+K+P Sbjct: 761 PEMYKLIGARKTVREQYKENLLGRGELTAEDAEKVQRDFHDQMESIFNDVK--ESEKKP 817 >gi|325261764|ref|ZP_08128502.1| transketolase, N- subunit [Clostridium sp. D5] gi|324033218|gb|EGB94495.1| transketolase, N- subunit [Clostridium sp. D5] Length = 279 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 7/135 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G VS G+A A K R GDG +GQV+E+ +A L N++ +++ Sbjct: 115 GSLGQGVSAAVGMALAAKLSRDSYRTYALLGDGEIQEGQVWEAAMLAGHHKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + ++ + K+ +FN + V DG D +KA D+A + KG P Sbjct: 175 NNGLQIDGAIDDVCSPYPIDKKFEAFNFHVINVADGNDFDQLKAAFDEA----KNTKGMP 230 Query: 275 IIIEMLTYRYRGHSM 289 I M T + +G S Sbjct: 231 TAIVMKTVKGKGVSF 245 >gi|194016830|ref|ZP_03055443.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Bacillus pumilus ATCC 7061] gi|194011436|gb|EDW21005.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Bacillus pumilus ATCC 7061] Length = 944 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 16/181 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A +G V E+ N++ L V I++I NN T + + + S Sbjct: 356 LAILIHGDAAFPGEGIVAETLNLSQLVGYQVGGTIHIIANNMIGFTTESNESRSTKYASD 415 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 F IP + V+ D A A + AV Y + K +I+++ YR GH+ M +P+ Sbjct: 416 LAKGFEIPIVHVNADDPEACLAAVQLAVEYRKRFKKDFLIDLIGYRRYGHNEMDEPST-- 473 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDL-----KEIEMNVRKIINNSVEFAQSDK 351 T+ + + H + K + +K +EG L +EIE V I + + S K Sbjct: 474 TQPMLYDAVRKHKTV----KNIFADKLVTEGLLTKEQREEIEQAVATRIEEAYQKVPSKK 529 Query: 352 E 352 E Sbjct: 530 E 530 >gi|256379029|ref|YP_003102689.1| transketolase [Actinosynnema mirum DSM 43827] gi|255923332|gb|ACU38843.1| Transketolase central region [Actinosynnema mirum DSM 43827] Length = 618 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 31/182 (17%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYGG----HGIV-----GAQVSLGTGIAFANKYRRS 179 LTGR G +G F +G+ H +V +S GIA A + + S Sbjct: 106 LTGRAAGFDGLRG-----FGGLSGYPSAAESQHDVVENSHSSTALSYADGIARALRLQGS 160 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN----- 234 D+ V GDGA G +E+ N A + VI V+ +N + + +A Sbjct: 161 DRRVVAVVGDGALTGGMAWEALNNLASADYPVIVVVNDNARSYAPTAGGLAAHLGRLRER 220 Query: 235 -----FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 F + G+ + P VDG D+ A++ + +A A R P+++ T + RG+ Sbjct: 221 RAHPVFEELGLPYLGP---VDGHDVPALEGVLAEAAALGR----PVVVHCATRKGRGYPP 273 Query: 290 SD 291 ++ Sbjct: 274 AE 275 >gi|321252061|ref|XP_003192274.1| oxoglutarate dehydrogenase (succinyl-transferring) [Cryptococcus gattii WM276] gi|317458742|gb|ADV20487.1| Oxoglutarate dehydrogenase (succinyl-transferring), putative [Cryptococcus gattii WM276] Length = 958 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 83/202 (41%), Gaps = 17/202 (8%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + V+ GD A A QG VYE+ + L N I++I NNQ T A + Sbjct: 338 SSAMGVLLHGDAAFAGQGVVYETMGMQNLPNYGTGGTIHLIVNNQIGFTTDPRFARSTPY 397 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S S + P V+ D+ AV A + K ++I+++ YR GH+ +D + Sbjct: 398 PSDIAKSIDAPIFHVNSDDVEAVNYVCTLAADWRATFKKDVVIDIVCYRRYGHNETDQPS 457 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV----RKIINNSVEFAQSD 350 + + ++ + +L+ SE ++ E V K + S ++ S Sbjct: 458 FTQPKMYKAIQKQPTVLSIYTDKLIKEGTFSEKEIDEHRQWVWGMLEKAYDGSKDYKPSP 517 Query: 351 KE---------PDPAELYSDIL 363 +E P P EL ++L Sbjct: 518 REWLSSSWEGFPSPKELAEEVL 539 >gi|113461102|ref|YP_719170.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus somnus 129PT] gi|170717679|ref|YP_001784754.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus somnus 2336] gi|112823145|gb|ABI25234.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus somnus 129PT] gi|168825808|gb|ACA31179.1| 2-oxoglutarate dehydrogenase, E1 subunit [Haemophilus somnus 2336] Length = 931 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 96/243 (39%), Gaps = 19/243 (7%) Query: 119 GVDASKIMAELTGRQGGISKGK----GGSMHMFSTKNG-------FYGGHGIVGAQVSLG 167 G S++ E G+ G G G F T +G F H + V LG Sbjct: 274 GKKPSELFDEFAGKHSGSGTGDVKYHQGFSSDFMTDDGIVHLALAFNPSHLEIVNPVVLG 333 Query: 168 TGIAFANKYR---RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQY 220 + A N+ + RS + + GD A A QG V E+ N++ + V I V+ NNQ Sbjct: 334 SVRARQNRIQDVERSQVLPITVHGDSAVAGQGIVQETLNMSEVRGYTVGGTIRVVINNQI 393 Query: 221 AMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 TS + + T + + P + V+G D AV AV + K I I++ Sbjct: 394 GFTTSNLQDTRSTEYCTDIAKMIEAPVIHVNGDDPEAVAYAARMAVEFRAKFKRDIFIDL 453 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 ++YR GH+ +D +R + P + RL+ E E+ R Sbjct: 454 VSYRRHGHNEADEPAVTQPLMYERIRKHPTPPKVYTNRLVTEGIIDEAYAIELANKYRDA 513 Query: 340 INN 342 ++N Sbjct: 514 LDN 516 >gi|319789128|ref|YP_004150761.1| Transketolase domain-containing protein [Thermovibrio ammonificans HB-1] gi|317113630|gb|ADU96120.1| Transketolase domain-containing protein [Thermovibrio ammonificans HB-1] Length = 287 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 6/110 (5%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 GHGI GA V + G+ + SD GDG A +G V+E+ A+ +NL N++ + Sbjct: 133 GHGI-GAAVGMAMGLKLSG----SDSKVYCMIGDGEAQEGSVWEASMAASHYNLDNLVVI 187 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ++NN + V + ++ +F ++++G D + +KA +D+A Sbjct: 188 LDNNNLQIDGPVDEVMSIYPAVEKWKAFGWHVVEINGHDFKEIKAALDEA 237 >gi|148554219|ref|YP_001261801.1| 2-oxoglutarate dehydrogenase E1 component [Sphingomonas wittichii RW1] gi|148499409|gb|ABQ67663.1| 2-oxoglutarate dehydrogenase E1 component [Sphingomonas wittichii RW1] Length = 970 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 5/141 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG + E F + L N I+ + NNQ TS A + Sbjct: 372 RSKVLPILLHGDAAFAGQGIIMECFGFSGLRGYNTGGTIHFVINNQVGFTTSPQFARSSP 431 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P + V+G D AV A + + K ++I+M YR GH+ D Sbjct: 432 YPSDIAKMVQAPILHVNGDDPEAVTFACKVATEFRQTFKRDVVIDMWCYRRFGHNEGDEP 491 Query: 294 NYRTREEINEMRSNHDPIEQV 314 + T+ + E H P+ + Sbjct: 492 GF-TQPLMYEAIRKHPPVSAI 511 >gi|331686262|gb|AED87011.1| 2-oxoglutarate dehydrogenase [Sterkiella histriomuscorum] Length = 1026 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 6/175 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYES + L N V I+V+ NNQ T+ ++ + + Sbjct: 419 VPILIHGDAAFAGQGIVYESMQMQDLINFTVGGTIHVVVNNQIGFTTTPHKSRSGVYCTD 478 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + + P V+ + V A Y +K ++I+++ YR GH+ D + T Sbjct: 479 IAKAIDAPIFHVNADSMEDVAKVFAIAAEYRSKYKEDVVIDLIGYRKMGHNELDAPQF-T 537 Query: 298 REEINEMRSNHDPIEQ-VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + + + + P+ Q K L+ N S+ + +++ + K +N + E ++S K Sbjct: 538 QPLMYKKIAQMTPVAQKYEKELVGNGIVSQETVDKMKDRIVKELNRAYEASKSHK 592 >gi|25027746|ref|NP_737800.1| alpha-ketoglutarate decarboxylase [Corynebacterium efficiens YS-314] gi|259506853|ref|ZP_05749753.1| 2-oxoglutarate dehydrogenase E1 component [Corynebacterium efficiens YS-314] gi|19912871|dbj|BAB88665.1| 2-oxoglutarate dehydrogenase [Corynebacterium efficiens] gi|23493029|dbj|BAC18000.1| 2-oxoglutarate dehydrogenase E1 component [Corynebacterium efficiens YS-314] gi|259165579|gb|EEW50133.1| 2-oxoglutarate dehydrogenase E1 component [Corynebacterium efficiens YS-314] Length = 1234 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 5/134 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A G V E+ N+AAL +V I+++ NNQ T+ + + + Sbjct: 652 VPLLLHGDAAFAGLGIVPETINLAALRGYDVGGTIHIVVNNQIGFTTTPDSSRSMHYATD 711 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +F P V+G D AV A Y R + I+++ YR RGH+ +D + T Sbjct: 712 CAKAFGCPVFHVNGDDPEAVVWVGQLATEYRRRFGKDVFIDLICYRLRGHNEADDPSM-T 770 Query: 298 REEINEMRSNHDPI 311 + ++ E+ + D + Sbjct: 771 QPKMYELITGRDSV 784 >gi|108802905|ref|YP_642842.1| transketolase [Rubrobacter xylanophilus DSM 9941] gi|108764148|gb|ABG03030.1| Transketolase-like protein [Rubrobacter xylanophilus DSM 9941] Length = 626 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 8/135 (5%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G + +G G+A A K+ R ++ V+C GD +G ++E+F AA + L N++ V Sbjct: 122 GSLGQGLPIGVGLALAGKHLDRLPYRVWVLC-GDSEMAEGSMWEAFQHAAHYGLDNLVAV 180 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ++ N+ ++ R +F +Q+DG D+ + D+A A P Sbjct: 181 LDMNRLGQTRETMDGWNGDAYAGRARAFGWHAIQIDGHDVEEI----DRAYAEALEQDKP 236 Query: 275 IIIEMLTYRYRGHSM 289 +++ T + RG S Sbjct: 237 VLVIARTRKGRGVSF 251 >gi|146090727|ref|XP_001466329.1| 2-oxoglutarate dehydrogenase subunit [Leishmania infantum JPCM5] Length = 1006 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 15/146 (10%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV--SRASAQ-TN 234 + ++ GD A A QG YE+ L N +V ++++ NNQ T+ SRASA T+ Sbjct: 374 LPILIHGDAAFAGQGSCYETMGFCELENFHVGGTLHLVINNQIGFTTNPKDSRASAYCTD 433 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 SK N P M V+G D+ A A + + III+++ YR GH+ +D + Sbjct: 434 LSKVN---NAPVMHVNGDDVDACVKAAKIAARFRQQFHHDIIIDLVCYRRYGHNETDLPD 490 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLH 320 + + P Q R+R LH Sbjct: 491 FTPAAAVQP----DSPAPQ-RRRHLH 511 >gi|17542494|ref|NP_500617.1| hypothetical protein T22B11.5 [Caenorhabditis elegans] gi|74959777|sp|O61199|ODO1_CAEEL RecName: Full=2-oxoglutarate dehydrogenase, mitochondrial; AltName: Full=2-oxoglutarate dehydrogenase complex component E1; Short=OGDC-E1; AltName: Full=Alpha-ketoglutarate dehydrogenase; Flags: Precursor gi|14916356|gb|AAB94185.2| Hypothetical protein T22B11.5 [Caenorhabditis elegans] Length = 1029 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 4/171 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+FN+ L + I+++ NNQ T + + + Sbjct: 408 MAILLHGDAAFAGQGVVLETFNLDDLPSYTTHGAIHIVVNNQIGFTTDPRSSRSSPYCTD 467 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 G P V+ D AV + A + + K +I++++ YR GH+ D + Sbjct: 468 VGRVVGCPIFHVNVDDPEAVMHVCNVAADWRKTFKKDVIVDLVCYRRHGHNELDEPMFTQ 527 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++ +E+ ++++L+ A+E +KE I+ ++ E AQ Sbjct: 528 PLMYQRIKQTKTALEKYQEKILNEGVANEQYVKEELTKYGSILEDAYENAQ 578 >gi|300789765|ref|YP_003770056.1| 2-oxoglutarate decarboxylase [Amycolatopsis mediterranei U32] gi|299799279|gb|ADJ49654.1| 2-oxoglutarate decarboxylase [Amycolatopsis mediterranei U32] Length = 1216 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N++ L ++VI NNQ T+ + + + Sbjct: 637 LPVLMHGDAAFAGQGVVAETLNLSLLRGYRTGGTVHVIVNNQVGFTTAPEHSRSSQYATD 696 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV Y +A ++I+++ YR RGH SM+ Sbjct: 697 VAKMIGSPIFHVNGDDPEAAHWVAKLAVEYRQAFHKDVVIDLICYRRRGHNEGDDPSMTQ 756 Query: 292 PANY 295 PA Y Sbjct: 757 PAMY 760 >gi|302185773|ref|ZP_07262446.1| transketolase, N-terminal subunit, putative [Pseudomonas syringae pv. syringae 642] Length = 282 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 92/227 (40%), Gaps = 17/227 (7%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 IRR + GQ+ G G VG G L + + + +Q Y GH A Sbjct: 20 IRRHALRMGQVQGQGYVGQALGAADLLAVSYFHALNYRPEDPDWEQRDRFYLSIGH-YAI 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FAN 174 + A+ I A++ + G S S + G I G + G GIA Sbjct: 79 ALYAALIEADIIPLDELETYGSDDSRLPMSGMATYTPGMEITGGSLGHGLGIAVGACLGL 138 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQ 232 K + S DG N+G +E+ A+ W L N+I +I+ NNQ A G S S A Sbjct: 139 KRKNSSSFVYNLLSDGELNEGSTWEAAMSASHWKLDNLIAIIDVNNQQADGHS-SEVLAF 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--PIII 277 R +F +VDG D+ A+ A DKA R H G P +I Sbjct: 198 EPIVDRWQAFGWFTQRVDGNDLDALVAAFDKA----RQHDGTQPRVI 240 >gi|120554081|ref|YP_958432.1| 2-oxoglutarate dehydrogenase E1 component [Marinobacter aquaeolei VT8] gi|120323930|gb|ABM18245.1| 2-oxoglutarate dehydrogenase E1 component [Marinobacter aquaeolei VT8] Length = 945 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 24/210 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR D + +V GD A A QG V E+F ++ V I+++ NNQ Sbjct: 340 GSVRARQDRRGDTDGSTVVPIVMHGDAAFAGQGVVMETFQMSQTRGFGVGGTIHIVINNQ 399 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS + T + + P + V+ D AV A+ Y K ++I+ Sbjct: 400 VGFTTSKQEDARSTEYCTDVAKMVQAPILHVNADDPEAVMFATQMAMDYRNEFKRDVVID 459 Query: 279 MLTYRYRGHSMSD------PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 ++ YR RGH+ +D P Y ++ R+ + +L+ +E + K++ Sbjct: 460 LVCYRRRGHNEADEPAATQPLMYDKIRKLKTTRAIY------ADQLVEAGVITEDEAKQM 513 Query: 333 EMNVRKIINNSVEFAQS-DKEPDPAELYSD 361 E + R ++ +S KEP+ ELY D Sbjct: 514 ETDYRDALDKGDHVVKSLVKEPN-KELYVD 542 >gi|308492295|ref|XP_003108338.1| hypothetical protein CRE_10246 [Caenorhabditis remanei] gi|308249186|gb|EFO93138.1| hypothetical protein CRE_10246 [Caenorhabditis remanei] Length = 1031 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 4/171 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+FN+ L + I+++ NNQ T + + + Sbjct: 405 MAILLHGDAAFAGQGVVLETFNLDDLPSYTTHGAIHIVVNNQIGFTTDPRSSRSSPYCTD 464 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 G P V+ D AV + A + + K +I++++ YR GH+ D + Sbjct: 465 VGRVVGCPIFHVNVDDPEAVMHVCNVAADWRKTFKKDVIVDLVCYRRHGHNELDEPMFTQ 524 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++ +E+ ++++L+ A+E +KE I+ ++ E AQ Sbjct: 525 PLMYQRIKETKTALEKYQEKILNEGVANEQYVKEELTKYGAILEDAYENAQ 575 >gi|108800937|ref|YP_641134.1| alpha-ketoglutarate decarboxylase [Mycobacterium sp. MCS] gi|119870077|ref|YP_940029.1| alpha-ketoglutarate decarboxylase [Mycobacterium sp. KMS] gi|122976640|sp|Q1B4V6|KGD_MYCSS RecName: Full=2-oxoglutarate decarboxylase; AltName: Full=2-oxoglutarate carboxy-lyase; AltName: Full=Alpha-ketoglutarate decarboxylase gi|160395551|sp|A1UK81|KGD_MYCSK RecName: Full=2-oxoglutarate decarboxylase; AltName: Full=2-oxoglutarate carboxy-lyase; AltName: Full=Alpha-ketoglutarate decarboxylase gi|108771356|gb|ABG10078.1| 2-oxoglutarate dehydrogenase E1 component [Mycobacterium sp. MCS] gi|119696166|gb|ABL93239.1| 2-oxoglutarate dehydrogenase E1 component [Mycobacterium sp. KMS] Length = 1269 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 12/182 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L I++I NNQ TS + A + + Sbjct: 679 VPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHLIVNNQIGFTTSPAAAKSSEYCTD 738 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I++L YR RGH SM+ Sbjct: 739 VAKMIGAPIFHVNGDDPEAAVWVSRLAVDFRQKFKKDVVIDLLCYRRRGHNEGDDPSMTQ 798 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 P+ Y + +R ++ E + R + +E L++ + + ++ N E + + Sbjct: 799 PSMYDVIDTKRGVRKSY--TEALIGRGDISMKEAEDALRDYQGQLEQVFNEVRELEKHEI 856 Query: 352 EP 353 EP Sbjct: 857 EP 858 >gi|51893449|ref|YP_076140.1| transketolase N-terminal subunit [Symbiobacterium thermophilum IAM 14863] gi|51857138|dbj|BAD41296.1| transketolase N-terminal subunit [Symbiobacterium thermophilum IAM 14863] Length = 273 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S G G+A A + R V GDG +GQV+E+ +A L + +++ Sbjct: 118 GSLGQGLSAGVGMALAARIRGEGWRTYVLLGDGEIQEGQVWEAAMLAGELRLTGLTAILD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + S + A R F +VDG D+ A+ A +D+ A P++ Sbjct: 178 FNRLSQTRSTTGAHPPDLLPGRWRGFGWEVREVDGHDVSALAAALDRP-----ADGRPLL 232 Query: 277 IEMLTYRYRGHSM 289 + T + RG S Sbjct: 233 VVAHTVKGRGVSF 245 >gi|118472055|ref|YP_889299.1| alpha-ketoglutarate decarboxylase [Mycobacterium smegmatis str. MC2 155] gi|160395549|sp|A0R2B1|KGD_MYCS2 RecName: Full=2-oxoglutarate decarboxylase; AltName: Full=2-oxoglutarate carboxy-lyase; AltName: Full=Alpha-ketoglutarate decarboxylase gi|118173342|gb|ABK74238.1| 2-oxoglutarate dehydrogenase, E1 component [Mycobacterium smegmatis str. MC2 155] Length = 1227 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L I+++ NNQ T+ + + + + Sbjct: 638 VPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTD 697 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + +A K ++I+ML YR RGH SM+ Sbjct: 698 VAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPSMTQ 757 Query: 292 PANY 295 P Y Sbjct: 758 PYMY 761 >gi|127511834|ref|YP_001093031.1| transketolase, central region [Shewanella loihica PV-4] gi|126637129|gb|ABO22772.1| branched-chain alpha-keto acid dehydrogenase E1 component [Shewanella loihica PV-4] Length = 763 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 12/157 (7%) Query: 180 DKICVVCFGDGAANQGQVYESFNIAALW------NLNVIYVIENNQYAMGTSVSRASAQT 233 D + FGD +AN + N AA W L +++V E+N + T+ Sbjct: 180 DSLVFCNFGDASANHASAQTAIN-AAGWAAYQQVPLPLLFVCEDNGIGISTATPNGWIAA 238 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 NF R I DG D+ +A Y R + P+ + + T R GH+ SD Sbjct: 239 NFKDRA---GIKYFYCDGRDLLDCYRVSRQAAEYARVKRKPVFLHVRTVRLMGHAGSDAE 295 Query: 294 -NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 Y ++++I + + DP+ K+++ K S ++ Sbjct: 296 IAYLSKQKIFDNEA-QDPLLLSAKQIIEAKLMSPDEI 331 >gi|332668389|ref|YP_004451177.1| transketolase central region [Haliscomenobacter hydrossis DSM 1100] gi|332337203|gb|AEE54304.1| Transketolase central region [Haliscomenobacter hydrossis DSM 1100] Length = 804 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 72/341 (21%), Positives = 137/341 (40%), Gaps = 46/341 (13%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++F++++ L +R+ + R A + G F G+E V M + +GD Sbjct: 17 AKFDRDEVLEDFRICCVSREVSLMARKEVLTGK-AKFAVTGDGKEVPQVAMAKAFLKGDY 75 Query: 105 MITAYREHGHILACG-VDASKIMAELTG--RQGGISKGKGGSMHMFSTKNGFYGGH---- 157 YR+ + A G V A+L S G+ + H + Y G Sbjct: 76 RAGYYRDQTWMFALGIVSLEDYFAQLYADTENDPYSGGRQMNNHFATPIVDPYTGEWANQ 135 Query: 158 ----------GIVGAQVSLGTGIAFANK-YR-------------RSDKICVVCFGDGAAN 193 Q++ G AFA+K YR R +++C GD + + Sbjct: 136 LEQYNVSADVSCTAGQMARALGFAFASKKYRESETLSEGTPFSHRGNEVCFSTIGDASTS 195 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 +G +E N A + + ++ + ++ Y + V + + + SK F P G+ Sbjct: 196 EGIFWEVINAAGVLQVPLVISVWDDGYGISVPVEYQTTKGSISKALKGFE-PDENGQGVT 254 Query: 254 IRAVK--------ATMDKAVAYCRAHKGP--IIIEMLTYRYRGHSMS-DPANYRTREEIN 302 I A K A + + R + P I IE +T + +GHS S Y+++E + Sbjct: 255 IYAEKAWRYPELVALYQRVIQDARVNHQPALIHIEEVT-QPQGHSTSGSHERYKSKERLQ 313 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 R + D I Q+ + ++ A+ ++++I+ RK + ++ Sbjct: 314 WER-DFDCILQMEQWMILEGLATPDEIRQIKDKARKTVKDA 353 >gi|126436562|ref|YP_001072253.1| alpha-ketoglutarate decarboxylase [Mycobacterium sp. JLS] gi|160395550|sp|A3Q3N5|KGD_MYCSJ RecName: Full=2-oxoglutarate decarboxylase; AltName: Full=2-oxoglutarate carboxy-lyase; AltName: Full=Alpha-ketoglutarate decarboxylase gi|126236362|gb|ABN99762.1| 2-oxoglutarate dehydrogenase E1 component [Mycobacterium sp. JLS] Length = 1264 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 12/182 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L I++I NNQ TS + A + + Sbjct: 674 VPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHLIVNNQIGFTTSPAAAKSSEYCTD 733 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I++L YR RGH SM+ Sbjct: 734 VAKMIGAPIFHVNGDDPEAAVWVSRLAVDFRQKFKKDVVIDLLCYRRRGHNEGDDPSMTQ 793 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 P+ Y + +R ++ E + R + +E L++ + + ++ N E + + Sbjct: 794 PSMYDVIDTKRGVRKSY--TEALIGRGDISMKEAEDALRDYQGQLEQVFNEVRELEKHEI 851 Query: 352 EP 353 EP Sbjct: 852 EP 853 >gi|90021751|ref|YP_527578.1| 2-oxoglutarate dehydrogenase E1 component [Saccharophagus degradans 2-40] gi|89951351|gb|ABD81366.1| 2-oxoglutarate dehydrogenase E1 component [Saccharophagus degradans 2-40] Length = 953 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 15/161 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG MH+ F H + + V G+ A + RR DK + VV GD A A Q Sbjct: 324 GGEMHL---ALAFNPSHLEIVSPVVEGS--VRARQDRRGDKDGHTVVPVVVHGDAAFAGQ 378 Query: 195 GQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVD 250 G V E+F ++ A ++++ NNQ TS + + T + + P V+ Sbjct: 379 GVVMETFQMSQTRAYKTGGTVHLVINNQVGFTTSRADDARSTAYCTDVAKMIETPIFHVN 438 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 G D AV A Y K ++I+++ YR RGH+ +D Sbjct: 439 GDDPEAVVYVTQLAADYRNEFKKDVVIDLVCYRRRGHNETD 479 >gi|77163803|ref|YP_342328.1| transketolase [Nitrosococcus oceani ATCC 19707] gi|254436127|ref|ZP_05049634.1| Transketolase, thiamine diphosphate binding domain protein [Nitrosococcus oceani AFC27] gi|76882117|gb|ABA56798.1| Transketolase [Nitrosococcus oceani ATCC 19707] gi|207089238|gb|EDZ66510.1| Transketolase, thiamine diphosphate binding domain protein [Nitrosococcus oceani AFC27] Length = 606 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G ++ GIA AN+ D GDG ++G V+E+ A+L +L N++ +++ Sbjct: 112 GSLGQGLAAANGIALANRLDGIDARIYCLLGDGECSEGSVWEAAQFASLNHLSNLVAIVD 171 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N A FS+R SF + +DG D+ A+ + +++A GP Sbjct: 172 VNALAQSGPAPYQHDIEVFSRRFQSFGWETITIDGHDLGAILSALEQA-----KKTGPTA 226 Query: 277 IEMLTYRYRGHSM 289 I T + +G S Sbjct: 227 IIAKTEKGKGVSF 239 >gi|163849250|ref|YP_001637294.1| 2-oxoglutarate dehydrogenase E1 component [Chloroflexus aurantiacus J-10-fl] gi|222527235|ref|YP_002571706.1| 2-oxoglutarate dehydrogenase E1 component [Chloroflexus sp. Y-400-fl] gi|163670539|gb|ABY36905.1| 2-oxoglutarate dehydrogenase, E1 subunit [Chloroflexus aurantiacus J-10-fl] gi|222451114|gb|ACM55380.1| 2-oxoglutarate dehydrogenase, E1 subunit [Chloroflexus sp. Y-400-fl] Length = 940 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 5/147 (3%) Query: 180 DKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF 235 + + ++ GD A QG V E+ N++ L + I++I NNQ T + + + Sbjct: 334 ESLAILIHGDAAFPGQGIVAETLNLSRLKGYHTGGTIHIIINNQIGFTTDSNDSRSTLYA 393 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 S IP + V+ D+ A A A AY + +I+++ YR GH+ D + Sbjct: 394 SDLARGLEIPVVHVNADDVEACIAAARMASAYREKFQKDFLIDLVGYRRWGHNEGDEPEF 453 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNK 322 T+ ++ E NH + ++ R L + Sbjct: 454 -TQPKMYERIRNHPTVREIWARELERR 479 >gi|239636906|ref|ZP_04677905.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus warneri L37603] gi|239597580|gb|EEQ80078.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus warneri L37603] Length = 934 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T + + T + Sbjct: 352 MPIIIHGDAAYPGQGINFETMNLGDLKGYSTGGSLHIITNNRIGFTTEPTDGRSTTYSTD 411 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P + V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 412 VAKGYDVPILHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRYGHNEMDEPSITN 471 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +R HD +E V + K EG + E EMN Sbjct: 472 PLPYQNIRK-HDSVELVYGK----KLVDEGIISEDEMN 504 >gi|325680318|ref|ZP_08159878.1| Transketolase, thiamine pyrophosphate binding domain protein [Ruminococcus albus 8] gi|324108027|gb|EGC02283.1| Transketolase, thiamine pyrophosphate binding domain protein [Ruminococcus albus 8] Length = 279 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 5/141 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G VS+ G+A + KY+ GDG +GQV+E+ AA + L N++ +++ Sbjct: 117 GSLGQGVSVAAGMALSAKYQGETYRVYTVLGDGEIEEGQVWEAAMFAAHYKLDNLVMIVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN + +S + + +F + ++ D D +++ ++A C P + Sbjct: 177 NNGLQIDGKISEVMSPYPIVDKFKAFGLHVVEADAHDFDSLEKAFNEAETVCGQ---PTV 233 Query: 277 IEMLTYRYRGHS-MSDPANYR 296 I M + + +G S M D ++ Sbjct: 234 IVMKSTKGKGVSYMEDNVSWH 254 >gi|238060864|ref|ZP_04605573.1| alpha-ketoglutarate decarboxylase [Micromonospora sp. ATCC 39149] gi|237882675|gb|EEP71503.1| alpha-ketoglutarate decarboxylase [Micromonospora sp. ATCC 39149] Length = 1267 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 10/125 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A A QG V E+ N++ L ++V+ NNQ T+ + + + Sbjct: 687 LPLAVHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHVVVNNQVGFTTAPEHSRSSLYSTD 746 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P + V+G D AV A Y +A ++I+M+ YR RGH SMS+ Sbjct: 747 VARMIEAPILHVNGDDPEAVVRVARLAFEYRQAFNKDVVIDMVCYRRRGHNEGDDPSMSN 806 Query: 292 PANYR 296 P Y+ Sbjct: 807 PQMYK 811 >gi|331686264|gb|AED87012.1| 2-oxoglutarate dehydrogenase [Sterkiella nova] Length = 1026 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 6/175 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYES + L N V I+V+ NNQ T+ ++ + + Sbjct: 419 VPILIHGDAAFAGQGIVYESMQMQDLINFTVGGTIHVVVNNQIGFTTTPHKSRSGVYCTD 478 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + + P V+ + V A Y +K ++I+++ YR GH+ D + T Sbjct: 479 IAKAIDAPIFHVNADSMEDVAKVFAIAAEYRSKYKEDVVIDLIGYRKMGHNELDAPQF-T 537 Query: 298 REEINEMRSNHDPIEQ-VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + + + + P+ Q K L+ N S+ + +++ + K +N + E ++S K Sbjct: 538 QPLMYKKIAQMTPVAQKYEKELVGNGIVSQETVDKMKDRIVKELNRAYEASKSHK 592 >gi|254470891|ref|ZP_05084294.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Pseudovibrio sp. JE062] gi|211960033|gb|EEA95230.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Pseudovibrio sp. JE062] Length = 989 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + + ++ GD A A QG V E F ++AL I+ I NNQ T+ + + Sbjct: 386 RDNVLPLLLHGDAAFAGQGVVAECFGLSALRGHRTGGSIHFIINNQIGFTTNPRFSRSSP 445 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A+ Y + P++I+M+ YR GH+ D Sbjct: 446 YPSDVAKVIEAPIFHVNGDDPEAVTYAAKIAIEYRQKFGRPVVIDMICYRRFGHNEGDEP 505 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + ++R + ++ +L+ S D+++ + + R ++ E Q+ K P Sbjct: 506 AFTQPIMYRKIRKHATTLQIYADKLVKEGLMSAEDVEKAKADWRAHLDREFETGQTYK-P 564 Query: 354 DPAE 357 + A+ Sbjct: 565 NKAD 568 >gi|56459288|ref|YP_154569.1| oxoisovalerate dehydrogenase alpha and beta subunits [Idiomarina loihiensis L2TR] gi|56178298|gb|AAV81020.1| Probable oxoisovalerate dehydrogenase alpha and beta subunits [Idiomarina loihiensis L2TR] Length = 728 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 17/134 (12%) Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWN------LNVIYVIENNQYAMGTSVSRASAQT 233 D I + FGD +AN + N A W+ + ++YV E+N + TS R Sbjct: 176 DAIVLCNFGDASANHSTAVGALN-ATGWSAYQGMPMPILYVCEDNGIGISTSTPRGWTAH 234 Query: 234 NFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 N P ++ DG ++ A +A Y R + P I+ + T R+ GH+ + Sbjct: 235 QLQ------NYPAIRYYYADGANVSETYAVARQAAEYIRRTRKPAILHLKTQRFFGHAGA 288 Query: 291 DP-ANYRTREEINE 303 D YR+ E I + Sbjct: 289 DAEVAYRSNESIEQ 302 >gi|146163023|ref|XP_001010650.2| Transketolase, pyridine binding domain containing protein [Tetrahymena thermophila] gi|146146152|gb|EAR90405.2| Transketolase, pyridine binding domain containing protein [Tetrahymena thermophila SB210] Length = 654 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 13/167 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ +KY S C GDG +G V+E+ + A ++ L N+I V+ Sbjct: 152 GSLGQGLGVACGMAYTSKYHDSLNNRFWCILGDGECAEGSVWEAAHFAGIYKLDNLIAVV 211 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-- 273 + N+ + S + KR +F + VDG DI A + KA C+ HK Sbjct: 212 DVNRLGQSEATSLGHNTNVYKKRFEAFGWNALVVDGHDIEA----LIKAFNECK-HKANQ 266 Query: 274 PIIIEMLTYRYRG-HSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 P II T + +G ++ D N+ + N++ D I+ + ++L+ Sbjct: 267 PSIIIAKTLKGKGLPNIEDQENWHGKPVGNKID---DLIKHLEEQLV 310 >gi|312888231|ref|ZP_07747808.1| Transketolase domain protein [Mucilaginibacter paludis DSM 18603] gi|311299262|gb|EFQ76354.1| Transketolase domain protein [Mucilaginibacter paludis DSM 18603] Length = 809 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 70/311 (22%), Positives = 127/311 (40%), Gaps = 54/311 (17%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASK-IMAELTG----RQGGISKGKG 141 G+E + M S GD YR+ + A G+ K A+L + S G+ Sbjct: 59 GKEVAQLAMAKSFRPGDWRAGYYRDQTFMFATGMSTLKEFFAQLYANPDVEKDPASAGRQ 118 Query: 142 GSMHMFSTKNGFYGGH--------------GIVGAQVSLGTGIAFANKYRRSDK------ 181 + H F+T+ G G + G+A+A+K R +K Sbjct: 119 MNCH-FATRTINQQGEWNNLTEMMNCAADISTTGGHMPRLLGLAYASKLFRQNKELEHLS 177 Query: 182 --------ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 + G+ + ++G +E+FN A + + + I ++ Y G SV A+ Sbjct: 178 NFSINGNEVAFGTIGNASTSEGLFFEAFNAAGVLQVPMAISIWDDAY--GISVP---AKY 232 Query: 234 NFSKRGVSFNIPGMQ------------VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 +K +S + G Q V G D A+ T +KA++ CR P++I + Sbjct: 233 QTTKEDISEILKGFQREEGTNGYEIFKVRGWDYVALCETYEKAISICRQEHVPVMIHVTE 292 Query: 282 Y-RYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 + +GHS S Y+++E + HD + Q+RK ++ + A+ +L +E +K Sbjct: 293 MTQPQGHSTSGSHERYKSKERL-AWEDEHDCLLQMRKWMVESAIATSEELDLLEEEAKKY 351 Query: 340 INNSVEFAQSD 350 + + A +D Sbjct: 352 VRSCQREAWND 362 >gi|149917440|ref|ZP_01905938.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Plesiocystis pacifica SIR-1] gi|149821777|gb|EDM81173.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit [Plesiocystis pacifica SIR-1] Length = 757 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 8/164 (4%) Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR---SDKICVVCFGDGAAN 193 S G+ + H S +G Q LG G+ +A+ +R+ D + V GDG Sbjct: 119 SGGRQMTAHFNSPDMNILPAQSSLGMQ--LGKGVGYAHGFRKKGHDDGLTVTIIGDGTMA 176 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 + ++E A++ + + +I +N A+ + + +F DG D Sbjct: 177 ESDLHEGMTGASILSTPSLIIITDNNVAISVTPEDGRGIRDIEAYAKAFGFEYFTADGND 236 Query: 254 IRAVKATMDKAVAYCRAHKGPII--IEMLTYRYRGHSMSDPANY 295 + T +A YCR ++ P + I+ L+ R GHS + N+ Sbjct: 237 FIDIYETTKRAATYCRDNQRPALFWIQNLS-RLNGHSNAGVYNF 279 >gi|114800323|ref|YP_759042.1| 2-oxoglutarate dehydrogenase E1 component [Hyphomonas neptunium ATCC 15444] gi|114740497|gb|ABI78622.1| 2-oxoglutarate dehydrogenase, E1 component [Hyphomonas neptunium ATCC 15444] Length = 1002 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 59/141 (41%), Gaps = 10/141 (7%) Query: 175 KYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRAS 230 K RS K+ ++ GD A A QG V E F ++ L I+ I NNQ TS + Sbjct: 387 KLDRSHKMPLLLHGDAAFAGQGVVAECFALSGLQGYRTGGTIHFIVNNQIGFTTSPMYSR 446 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH--- 287 + S + P V+G D AV A Y + ++I+M YR GH Sbjct: 447 SSPYPSDVALMVQAPIFHVNGDDPEAVVYAAKVATEYRQKFAKDVVIDMFCYRRFGHNEG 506 Query: 288 ---SMSDPANYRTREEINEMR 305 +M+ P YR +E R Sbjct: 507 DDPTMTQPVMYRVIKERPSTR 527 >gi|294994806|ref|ZP_06800497.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis 210] Length = 1231 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 642 VPLMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSSEYCTD 701 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D +A AV + + K ++I+ML YR RGH SM++ Sbjct: 702 VAKMIGAPIFHVNGDDPKACVWVARLAVDFRQRFKKDVVIDMLCYRRRGHNEGDDPSMTN 761 Query: 292 PANY 295 P Y Sbjct: 762 PYMY 765 >gi|168701056|ref|ZP_02733333.1| alpha-ketoglutarate decarboxylase [Gemmata obscuriglobus UQM 2246] Length = 1000 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 16/175 (9%) Query: 131 GRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVV 185 G + GG++H+ T N + IV V G A + R DK + V+ Sbjct: 279 GFSADVETADGGTVHLSVTPNPSH--LEIVNPVVE---GRVRAKQRRHGDKERVTGVPVL 333 Query: 186 CFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 GD A A QG + E+FN+ L I+V+ NNQ T+ R S T + Sbjct: 334 IHGDAAFAGQGVIMETFNLMNLAGYRTGGTIHVVVNNQIGFTTN-PRDSRSTQYCTDIAK 392 Query: 242 F-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 F P + V+ D A A + A+ + + K ++I+++ YR GH+ D Y Sbjct: 393 FIQAPILHVNAEDPEACVAAAEFALEFRQQFKCDVVIDLVCYRRWGHNEGDNPGY 447 >gi|320167571|gb|EFW44470.1| dehydrogenase E1 and transketolase domain-containing protein [Capsaspora owczarzaki ATCC 30864] Length = 949 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 14/139 (10%) Query: 180 DKI-CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 DK+ C+ GD A A QG V ES +A L + +V +++I NNQ T RA + Sbjct: 355 DKVMCLQLHGDAAFAAQGVVTESLGMANLPHYSVGGTVHMIVNNQLGFTTPSDRARSSRY 414 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------S 288 S G + P + V+G V A+ Y + I+I+++ YR GH S Sbjct: 415 CSDVGKMIDCPVIHVNGDHPEEVVRAARLAMEYRMKFRKDILIDLICYRRMGHNELDDPS 474 Query: 289 MSDPA---NYRTREEINEM 304 M+ P N RT + + +M Sbjct: 475 MTQPVMYKNIRTHKSVPKM 493 >gi|237785254|ref|YP_002905959.1| alpha-ketoglutarate decarboxylase [Corynebacterium kroppenstedtii DSM 44385] gi|237758166|gb|ACR17416.1| 2-oxoglutarate dehydrogenase, E1 component [Corynebacterium kroppenstedtii DSM 44385] Length = 1300 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 9/161 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A G + E+ N++ L V +++ NNQ T+ + + Sbjct: 708 MPILVHGDAAMTGLGIMQETVNLSQLRGYTVGGTVHIAVNNQIGFTTTPDSGRSSQYATD 767 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +F P V+G D AV AV Y R + I+++ YR RGH+ +D + T Sbjct: 768 LAKAFGCPVFHVNGNDPEAVVWVAKLAVEYRRQFGKDVFIDLICYRRRGHNEADDPSM-T 826 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + E+ ++ N + + R L GDL E E+ + K Sbjct: 827 QPEMYQIIDNKPTVRDIYTRSL----VGRGDLSEDEVEIVK 863 >gi|111020290|ref|YP_703262.1| pyruvate dehydrogenase (acetyl-transferring) beta subunit [Rhodococcus jostii RHA1] gi|110819820|gb|ABG95104.1| probable pyruvate dehydrogenase (acetyl-transferring) beta subunit [Rhodococcus jostii RHA1] Length = 740 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 12/161 (7%) Query: 179 SDKICVVCFGDGAANQGQVYESFNIAAL-----WNLNVIYVIENNQYAMGTSVSRASAQT 233 +D I V FGD +AN + N A L ++ V E+N + T + Sbjct: 181 ADAIAVGSFGDASANHSTAVGAINTAVHAAYQGLPLPLLLVCEDNGIGISTKTPKGWIAA 240 Query: 234 NFSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 NF R G+ + + DG D+ A AT A + R ++ P + + T R GH+ SD Sbjct: 241 NFGDRAGLEY----FEADGSDLPAAYATAVSAAEWVRRNRKPAFLHLRTIRLMGHAGSDV 296 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 A YRT EI DP+ K L+ S ++ ++ Sbjct: 297 EAAYRTSAEIT-ADFERDPVLCTAKLLIERGHLSPTEILDL 336 >gi|114050833|ref|NP_001040158.1| transketolase [Bombyx mori] gi|87248239|gb|ABD36172.1| transketolase [Bombyx mori] Length = 622 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 5/133 (3%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G +++ G+A+ KY V C GDG A +G ++ES + A+ + L N++ Sbjct: 118 GTGSLGQGLAVAAGMAYVGKYFDQAPYRVYCLVGDGEAAEGSIWESLHFASHYKLDNLVV 177 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 + + N+ S + R +F + + VDG D+ + D+A + Sbjct: 178 IFDVNRLGQSEPTSLQHQLEVYDARLKAFGLNSLVVDGHDVTELVKAFDEAASVT---GK 234 Query: 274 PIIIEMLTYRYRG 286 P + TY+ RG Sbjct: 235 PTALVAKTYKGRG 247 >gi|269120083|ref|YP_003308260.1| transketolase [Sebaldella termitidis ATCC 33386] gi|268613961|gb|ACZ08329.1| Transketolase domain protein [Sebaldella termitidis ATCC 33386] Length = 273 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G++G +S+G G+A K ++ V GDG ++GQV+E+ A + L N++ +++ Sbjct: 112 GLLGQGLSIGIGMALGKKLKKDGNRVYVILGDGELHEGQVWEALMSAPHYKLDNLVAILD 171 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + V++ + +FN M+++G + + + KA P+ Sbjct: 172 YNRLSSKDDVNKVMNLEPLRDKIKAFNWELMEINGHSMEEITEVLGKAKEIVEK---PVF 228 Query: 277 IEMLTYRYRGHSM 289 I T + +G S Sbjct: 229 IIADTVKGKGVSF 241 >gi|268552375|ref|XP_002634170.1| Hypothetical protein CBG01737 [Caenorhabditis briggsae] gi|74847278|sp|Q623T0|ODO1_CAEBR RecName: Full=2-oxoglutarate dehydrogenase, mitochondrial; AltName: Full=2-oxoglutarate dehydrogenase complex component E1; Short=OGDC-E1; AltName: Full=Alpha-ketoglutarate dehydrogenase; Flags: Precursor gi|187037980|emb|CAP22897.1| hypothetical protein CBG_01737 [Caenorhabditis briggsae AF16] Length = 1027 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 4/171 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+FN+ L + I+++ NNQ T + + + Sbjct: 406 MAILLHGDAAFAGQGVVLETFNLDDLPSYTTHGAIHIVVNNQIGFTTDPRSSRSSPYCTD 465 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 G P V+ D AV + A + + K +I++++ YR GH+ D + Sbjct: 466 VGRVVGCPIFHVNVDDPEAVMHVCNVAADWRKTFKKDVIVDLVCYRRHGHNELDEPMFTQ 525 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++ +E+ ++++L+ A+E +KE I+ ++ E AQ Sbjct: 526 PLMYQRIKQTKTALEKYQEKILNEGVANEQYVKEELTKYGAILEDAYENAQ 576 >gi|223983513|ref|ZP_03633698.1| hypothetical protein HOLDEFILI_00979 [Holdemania filiformis DSM 12042] gi|223964508|gb|EEF68835.1| hypothetical protein HOLDEFILI_00979 [Holdemania filiformis DSM 12042] Length = 271 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 6/131 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A ANK +++ V GDG + +GQV+E+ AA + L N+ +++ Sbjct: 113 GSLGQGISCAVGMALANKLDQNEHRIYVLIGDGESEEGQVWEACMAAAHYQLDNLCVILD 172 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + + + F + +F ++++G + + +DKA + KG P Sbjct: 173 YNHLQIDGDLQEVISPEPFQPKFAAFGFHTLEINGHCMTEILTALDKA----KTLKGKPT 228 Query: 276 IIEMLTYRYRG 286 +I T + +G Sbjct: 229 VIIAHTVKGKG 239 >gi|167772745|ref|ZP_02444798.1| hypothetical protein ANACOL_04127 [Anaerotruncus colihominis DSM 17241] gi|167665223|gb|EDS09353.1| hypothetical protein ANACOL_04127 [Anaerotruncus colihominis DSM 17241] Length = 286 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 6/136 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G SL G+A K R++D + GDG ++GQV+E AA L+ +I ++ Sbjct: 118 GSLGQGASLAAGMALGLKMRKNDAYTYLILGDGECDEGQVWEMALFAAQQKLDHLIAFVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N+ + A + ++ F ++VDG D+ A+ ++ A ++ G P Sbjct: 178 LNRQQLDGYTDEILALGDLRRKFEDFGWHAVEVDGHDVSAIHDAIEDA----KSRAGVPS 233 Query: 276 IIEMLTYRYRGHSMSD 291 +I + T + +G S+++ Sbjct: 234 MIVLDTVKGKGWSVTE 249 >gi|115359160|ref|YP_776298.1| transketolase domain-containing protein [Burkholderia ambifaria AMMD] gi|115284448|gb|ABI89964.1| Transketolase domain protein [Burkholderia ambifaria AMMD] Length = 281 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 7/131 (5%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K SD F DG ++G ++E AA Sbjct: 109 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRNGSDAFVYTLFSDGELDEGAIWEGLMSAA 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 W L N+I +++ NNQ A G S ++ A + +F +VDG DI AVK D Sbjct: 169 HWKLDNLIAIVDVNNQQADGPS-TQVMAFEPLVDKLEAFGWYTQRVDGNDIDAVKRAFDN 227 Query: 264 AVAYCRAHKGP 274 A R H P Sbjct: 228 A----RRHAEP 234 >gi|284042509|ref|YP_003392849.1| 2-oxoglutarate dehydrogenase, E1 subunit [Conexibacter woesei DSM 14684] gi|283946730|gb|ADB49474.1| 2-oxoglutarate dehydrogenase, E1 subunit [Conexibacter woesei DSM 14684] Length = 1425 Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 5/179 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 +V GD A QG V E+FN+ AL V I++I+NNQ T A + S Sbjct: 830 IVLHGDAAFPGQGVVAETFNLQALDGYTVGGTIHLIQNNQVGFTTDPDDARSTRWASDMA 889 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 F++P + V+ D+ A A + A AY + ++I+++ YR GH+ +D Y E Sbjct: 890 KGFDVPIIHVNADDVAASVAAVRLAHAYRQEFGHDVVIDLIGYRRFGHNEADEPAYTQPE 949 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV-RKIINNSVEFAQSDKEPDPAE 357 +R + + K+L+ ++ D+ I V +K+ E P E Sbjct: 950 MYTRIRRHPTMPQLFGKQLVDAGVVTQDDVDAITNEVWQKLTEQHQELKARLAAASPVE 1008 >gi|320006735|gb|ADW01585.1| Transketolase domain-containing protein [Streptomyces flavogriseus ATCC 33331] Length = 275 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 1/107 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +SLG G A A + SD+ C V GDG +G V+E+ A L+ ++ +++ Sbjct: 110 GSLGHGLSLGVGFALAARLDGSDRRCFVVLGDGELQEGSVWEAAMAAGSQKLDRLVAIVD 169 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 N + R SF ++VDG D ++ + + Sbjct: 170 RNGLQISGDTEETMGLEPLGDRWRSFGWTVLEVDGHDPEQLRTALSR 216 >gi|218296108|ref|ZP_03496877.1| 2-oxoglutarate dehydrogenase, E1 subunit [Thermus aquaticus Y51MC23] gi|218243485|gb|EED10014.1| 2-oxoglutarate dehydrogenase, E1 subunit [Thermus aquaticus Y51MC23] Length = 894 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 13/195 (6%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 F ++ RR + V+ GD A +G V E+ N++ L V ++V+ NNQ T S Sbjct: 305 FGDRERRRG-LAVLVHGDSAFIGEGIVQETLNLSQLPGYGVGGTLHVVANNQLGFTTLPS 363 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 ++ + P V+ + + + A+AY + + ++I+++ YR RGH Sbjct: 364 EYTSCRYPTDIAKMLGAPIFHVNAEALDELWFVLRLALAYRQRYGKDVVIDLVGYRRRGH 423 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK---IINNSV 344 + +D ++ E+ +P + +RLL +EG + + E+ + + Sbjct: 424 NETDEPSFTQPTMYAEIARRPEPWKVYAERLL-----AEGAISQEEIGAWQEAYLERLES 478 Query: 345 EFAQSDKEPDPAELY 359 EFA+ EP P L+ Sbjct: 479 EFARVKAEPGPVVLH 493 >gi|145222806|ref|YP_001133484.1| alpha-ketoglutarate decarboxylase [Mycobacterium gilvum PYR-GCK] gi|315443273|ref|YP_004076152.1| 2-oxoglutarate dehydrogenase E1 component [Mycobacterium sp. Spyr1] gi|145215292|gb|ABP44696.1| 2-oxoglutarate dehydrogenase E1 component [Mycobacterium gilvum PYR-GCK] gi|315261576|gb|ADT98317.1| 2-oxoglutarate dehydrogenase E1 component [Mycobacterium sp. Spyr1] Length = 1283 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 13/193 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L I++I NNQ TS + + + + Sbjct: 694 VPMMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIIVNNQIGFTTSPTDSRSSEYCTD 753 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM+ Sbjct: 754 VAKMIGAPIFHVNGDDPEAAVWVAKLAVDFRQKFKKDVVIDMLCYRRRGHNEGDDPSMTQ 813 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 P Y + +R + E + R + +E L++ + + ++ N + + + Sbjct: 814 PYMYDVIDTKRGVRKTY--TEALIGRGDISMKEAEDALRDYQGQLERVFNEVRDLEKHEI 871 Query: 352 EPDPAELYSDILI 364 EP A + SD ++ Sbjct: 872 EPS-ASVESDQMV 883 >gi|256380243|ref|YP_003103903.1| alpha-ketoglutarate decarboxylase [Actinosynnema mirum DSM 43827] gi|255924546|gb|ACU40057.1| 2-oxoglutarate dehydrogenase, E1 subunit [Actinosynnema mirum DSM 43827] Length = 1242 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N+A + ++VI NNQ T+ + + + Sbjct: 664 LPVAMHGDAAFAGQGVVAETLNLALVRGYRTGGTVHVIVNNQVGFTTAPENSRSSKYSTD 723 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV Y +A ++I+M+ YR RGH SM+ Sbjct: 724 VAKMIGAPVFHVNGDDPEACYWVAKLAVDYRQAFNKDVVIDMVCYRRRGHNEGDDPSMTQ 783 Query: 292 PANY 295 PA Y Sbjct: 784 PAMY 787 >gi|269838082|ref|YP_003320310.1| 2-oxoglutarate dehydrogenase, E1 subunit [Sphaerobacter thermophilus DSM 20745] gi|269787345|gb|ACZ39488.1| 2-oxoglutarate dehydrogenase, E1 subunit [Sphaerobacter thermophilus DSM 20745] Length = 936 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 9/180 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A +G V E+ N++ L V +++I NNQ T +A + S Sbjct: 340 LSILIHGDAAFPGEGIVAETLNLSRLAGYQVGGTLHIIANNQIGFTTEPWQARSTHYASD 399 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 F IP + V+ D A AVAY + +I+++ YR GH+ D + T Sbjct: 400 PARGFEIPIVHVNADDPVACLIATRLAVAYRQRFHKDFLIDLIGYRRWGHNEGDEPGF-T 458 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGD----LKEIEMNVRKIINNSVEFAQSDKEP 353 + + E+ S H + + L ++ D +K+ +N + I N+V + EP Sbjct: 459 QPRMYEIVSRHPTVRDIWVASLVDEGVVTKDEADSMKQAALNKLQEIRNAVAHGEEGGEP 518 >gi|42524145|ref|NP_969525.1| alpha-ketoglutarate decarboxylase [Bdellovibrio bacteriovorus HD100] gi|39576353|emb|CAE80518.1| oxoglutarate dehydrogenase [Bdellovibrio bacteriovorus HD100] Length = 901 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 14/174 (8%) Query: 164 VSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 V+LG A ++ S K + V+ GD A A QG V E+ +A + + + I++I Sbjct: 293 VALGMARAAQDQIGASGKKNVVPVLIHGDAAFAGQGIVQETLQMAGVHSHSTGGTIHIII 352 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNI-PGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +NQ TS + + T ++ P + V+G D+ + MD A+ Y + + Sbjct: 353 DNQVGFTTS-GKDTRSTRYASDAAKMTFTPVLHVNGDDVESAVRAMDIALRYRQEFGKDV 411 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 +I +L YR GH+ D + T+ ++ E+ H + + L K A+EG + Sbjct: 412 VINLLCYRKYGHNEGDEPAF-TQPQMYELIKTHATV----RELFAKKLAAEGSV 460 >gi|88860189|ref|ZP_01134828.1| 2-oxoglutarate decarboxylase [Pseudoalteromonas tunicata D2] gi|88818183|gb|EAR27999.1| 2-oxoglutarate decarboxylase [Pseudoalteromonas tunicata D2] Length = 938 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 39/229 (17%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHIL--ACGVDASKIMAELTGRQGGISKG----- 139 GQE V++GM A+R ++L G + S++ E G+ S G Sbjct: 253 GQEEVVIGM------------AHRGRLNVLINVMGKNPSELFDEFAGKIKSSSSGDVKYH 300 Query: 140 ---------KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR---SDKICVVCF 187 KGG++HM + F H + V +G+ A ++ R S + + Sbjct: 301 MGYSSDFTTKGGNVHMVLS---FNPSHLEIVNPVVMGSVRARLDRLGRNTGSKALPITIH 357 Query: 188 GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSF 242 GD A A QG V E+FN++ +V + ++ NNQ TS T + + Sbjct: 358 GDSAIAGQGVVQETFNLSQTRAFSVGGTVRIVVNNQVGFTTSKKEDVRSTEYCTDIAKMV 417 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV A+ + K ++I+++ YR GH+ +D Sbjct: 418 QAPIFHVNADDPEAVALVTHIALDFRNQFKRDVVIDLVCYRRHGHNEAD 466 >gi|210616977|ref|ZP_03291312.1| hypothetical protein CLONEX_03534 [Clostridium nexile DSM 1787] gi|210149500|gb|EEA80509.1| hypothetical protein CLONEX_03534 [Clostridium nexile DSM 1787] Length = 278 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K D GDG +GQV+E+ +A+ L N++ +++ Sbjct: 115 GSLGQGISAAVGMALSAKLSNEDYRVYTLLGDGEIQEGQVWEAAMLASHRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + ++ + K+ +FN + VDG D A+ A +A Sbjct: 175 NNGLQIDGAIDEVCSPYPIDKKFEAFNFHVINVDGHDFDALDAAFKEA 222 >gi|145592305|ref|YP_001154307.1| transketolase domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145284073|gb|ABP51655.1| transketolase subunit A [Pyrobaculum arsenaticum DSM 13514] Length = 268 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +SL G+A + + + GDG ++GQ +ESF +AA +NL N++ +++ Sbjct: 118 GSLGQGISLAVGLALGLRLKGERGRVYLVVGDGELDEGQSWESFAVAAHYNLANLVTIVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + + + R S +VDG D+ + + +++A R P + Sbjct: 178 LNGVQLDGHSEEVLRKGDLAGRFKSLGFEVFEVDGHDVGQLISALERAEKSER----PAV 233 Query: 277 IEMLTYRYRG-HSMSDPANYR 296 I T R +G ++ D A R Sbjct: 234 IIAKTVRGKGVPAIEDTAKQR 254 >gi|86739985|ref|YP_480385.1| transketolase [Frankia sp. CcI3] gi|86566847|gb|ABD10656.1| Transketolase-like [Frankia sp. CcI3] Length = 624 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 8/134 (5%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G + G G+A A KY + ++ V+C GD +G V+E+ + A+ +NL N+I + Sbjct: 127 GSLGQGLPDGVGVALAGKYLDKVPYRVWVIC-GDSEMAEGSVWEALDKASYYNLSNLIAI 185 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ++ N+ +++R SF + VDG DI A+ A + A R P Sbjct: 186 VDVNRLGQRGPTELGWDLDTYARRVESFGARAVVVDGHDIAAIDAVLADAEDVTR----P 241 Query: 275 IIIEMLTYRYRGHS 288 +I T + G S Sbjct: 242 TVILARTRKGEGFS 255 >gi|154509469|ref|ZP_02045111.1| hypothetical protein ACTODO_02001 [Actinomyces odontolyticus ATCC 17982] gi|153799103|gb|EDN81523.1| hypothetical protein ACTODO_02001 [Actinomyces odontolyticus ATCC 17982] Length = 1304 Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 10/135 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 I ++ GD A QG V E+ N++ L I++I NNQ T ++ + + Sbjct: 698 IPILIHGDAAFIGQGVVQETLNLSQLEGYKTGGTIHIIVNNQIGFTTGPTQGRSTGYATD 757 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 +P + V+ D AV A Y A +II+M+ YR RGH SM+ Sbjct: 758 LAKGLQVPILHVNADDPEAVIRCAHLAFEYRNAFHKDVIIDMVCYRRRGHNEGDDPSMTQ 817 Query: 292 PANYRTREEINEMRS 306 P Y + I R+ Sbjct: 818 PVMYSLIDRIPSTRA 832 >gi|255985847|ref|YP_354049.3| 2-oxoglutarate dehydrogenase E1 component [Rhodobacter sphaeroides 2.4.1] gi|77388963|gb|ABA80148.1| 2-oxoglutarate dehydrogenase E1 component [Rhodobacter sphaeroides 2.4.1] Length = 992 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L I+++ NNQ T+ S + + Sbjct: 390 RHTVLPILLHGDAAFAGQGVVAECFGLSGLVGHRTGGTIHIVVNNQIGFTTAPSFSRSSP 449 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+G D AV A + + ++I++ YR GH+ D Sbjct: 450 YPTDIALMVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDIFCYRRFGHNEGDEP 509 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + ++ + ++ +RL+ + EG++++++ + +N E A D +P Sbjct: 510 MFTNPSMYTSIKKHKTTLQLYTERLVRDGLIPEGEIEDMKAAFQAKLNEEFE-AGKDFKP 568 Query: 354 DPAE 357 + A+ Sbjct: 569 NKAD 572 >gi|126463385|ref|YP_001044499.1| 2-oxoglutarate dehydrogenase E1 component [Rhodobacter sphaeroides ATCC 17029] gi|332559438|ref|ZP_08413760.1| 2-oxoglutarate dehydrogenase E1 component [Rhodobacter sphaeroides WS8N] gi|126105049|gb|ABN77727.1| 2-oxoglutarate dehydrogenase E1 component [Rhodobacter sphaeroides ATCC 17029] gi|332277150|gb|EGJ22465.1| 2-oxoglutarate dehydrogenase E1 component [Rhodobacter sphaeroides WS8N] Length = 987 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L I+++ NNQ T+ S + + Sbjct: 385 RHTVLPILLHGDAAFAGQGVVAECFGLSGLVGHRTGGTIHIVVNNQIGFTTAPSFSRSSP 444 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+G D AV A + + ++I++ YR GH+ D Sbjct: 445 YPTDIALMVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDIFCYRRFGHNEGDEP 504 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + ++ + ++ +RL+ + EG++++++ + +N E A D +P Sbjct: 505 MFTNPSMYTSIKKHKTTLQLYTERLVRDGLIPEGEIEDMKAAFQAKLNEEFE-AGKDFKP 563 Query: 354 DPAE 357 + A+ Sbjct: 564 NKAD 567 >gi|170697100|ref|ZP_02888195.1| Transketolase domain protein [Burkholderia ambifaria IOP40-10] gi|170137936|gb|EDT06169.1| Transketolase domain protein [Burkholderia ambifaria IOP40-10] Length = 281 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 7/131 (5%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K SD F DG ++G ++E AA Sbjct: 109 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRNGSDAFVYTLFSDGELDEGAIWEGLMSAA 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 W L N+I +++ NNQ A G S ++ A + +F +VDG DI AVK D Sbjct: 169 HWKLDNLIAIVDVNNQQADGPS-TQVMAFEPLVDKLEAFGWYTQRVDGNDIDAVKRAFDN 227 Query: 264 AVAYCRAHKGP 274 A R H P Sbjct: 228 A----RRHAKP 234 >gi|154287386|ref|XP_001544488.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor [Ajellomyces capsulatus NAm1] gi|150408129|gb|EDN03670.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor [Ajellomyces capsulatus NAm1] Length = 1054 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 18/151 (11%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T A + S Sbjct: 444 VLLHGDAAFAAQGVVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRFARSTPYCSDIA 503 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY---- 295 + + P V+G D+ A+ A + K ++I+++ YR +GH+ +D ++ Sbjct: 504 KAIDAPVFHVNGDDVEALNYVCQMAADWRATFKRDVVIDIVCYRKQGHNETDQPSFTQPL 563 Query: 296 ---RTREEINEMRSNHDPIEQVRKRLLHNKW 323 R E+ N++ + D IE+ H KW Sbjct: 564 MYKRIAEQTNQLDNKAD-IEE------HKKW 587 >gi|309775286|ref|ZP_07670295.1| transketolase, N- subunit [Erysipelotrichaceae bacterium 3_1_53] gi|308916949|gb|EFP62680.1| transketolase, N- subunit [Erysipelotrichaceae bacterium 3_1_53] Length = 284 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S GIA K + S++ + GDG N+GQ +E+F A + L N I VI+ Sbjct: 118 GSLGQGTSAAAGIATGLKMKGSNRYVYMIVGDGELNEGQCWEAFQYVANYKLNNCIVVID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 +N+ + + + +F V G DI A+ A +D+A A Sbjct: 178 DNKRQLDGFTKDVMNPFSIPDKMKAFGFDVQVVKGDDIEAIDAAIDRAKA 227 >gi|85374427|ref|YP_458489.1| 2-oxoglutarate dehydrogenase E1 component [Erythrobacter litoralis HTCC2594] gi|84787510|gb|ABC63692.1| SucA, 2-oxoglutarate dehydrogenase, E1 component [Erythrobacter litoralis HTCC2594] Length = 950 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V+ES +++ + N I+ I NNQ TS A + S Sbjct: 341 LPVLIHGDAAFAGQGVVWESLSLSGIPGYNTGGCIHFIINNQIGFTTSPKFARSSPYPSD 400 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 P + V+G D AV A+ Y + ++I+M YR GH+ D + Sbjct: 401 VAKGIQAPILHVNGDDPEAVTFACKLAIEYRQTFGRDVVIDMWCYRRFGHNEGDEPKF 458 >gi|330915031|ref|XP_003296878.1| hypothetical protein PTT_07092 [Pyrenophora teres f. teres 0-1] gi|311330771|gb|EFQ95025.1| hypothetical protein PTT_07092 [Pyrenophora teres f. teres 0-1] Length = 1043 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 4/164 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ L + + I++I NNQ T + + S Sbjct: 421 VLLHGDAAFAAQGVVYETMGFHQLPSYHTGGTIHIIVNNQIGFTTDPRFSRSTPYCSDIA 480 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+M+ YR +GH+ +D + Sbjct: 481 KAIDAPVFHVNGDDVEALNFVCQLAADFRAEFKKDVVIDMVCYRKQGHNETDQPFFTQPL 540 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 ++ ++ K+LL K ++ D+ E + V +++ S Sbjct: 541 MYKKISQQPQTLDIYTKKLLEEKTFTKEDIDEHKAWVWGMLDES 584 >gi|300309645|ref|YP_003773737.1| transketolase N-terminal subunit [Herbaspirillum seropedicae SmR1] gi|300072430|gb|ADJ61829.1| transketolase N-terminal subunit protein [Herbaspirillum seropedicae SmR1] Length = 272 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 5/152 (3%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G+ +G +G + + TG+A K SD+ V GDG ++G +E+ A+ L N Sbjct: 111 GYETVNGSLGHGLGVATGMALGLKRSGSDRSVFVVAGDGELHEGANWEAIMFASQHKLDN 170 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 + ++++N+ +M + + R +F M+VDG D+ AV+A + + A+ Sbjct: 171 LHLIVDDNRISMLGYTEDIVSHGELATRLSAFGWDCMEVDGHDVLAVQAALLQQKAHAAG 230 Query: 271 HKGPIIIEMLTYRYRGHSMSDPANYRTREEIN 302 II L +GH + N IN Sbjct: 231 KPKAIIARTL----KGHGVPGLENAPLSHIIN 258 >gi|289626368|ref|ZP_06459322.1| transketolase, N-terminal subunit, putative [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 282 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 91/227 (40%), Gaps = 17/227 (7%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 IRR + GQ+ G G VG G L + + E +Q Y GH A Sbjct: 20 IRRHALRMGQVQGQGYVGQALGAADLLAVSYFHALNYRPEDPEWEQRDRFYLSIGH-YAI 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FAN 174 + A+ I AE+ + G S S + G I G + G GIA Sbjct: 79 ALYAALIEAEIVPLDELETYGSDDSRLPMSGMATYTPGMEITGGSLGHGLGIAVGACLGL 138 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQ 232 K + S DG N+G +E+ A+ W L N+I +++ NNQ A G S S A Sbjct: 139 KRKASRSFVYNLLSDGELNEGSTWEAAMSASHWKLDNLIAIVDVNNQQADGHS-SEVLAF 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--PIII 277 R +F +VDG D+ A+ A D A R H G P +I Sbjct: 198 EPIVDRWQAFGWFTQRVDGNDLDALVAAFDNA----RQHDGTQPRVI 240 >gi|225446107|ref|XP_002270336.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 731 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 28/224 (12%) Query: 13 IKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQL 72 +K ALN S ++ +TS +D ++ P + LS L +L E+ + Sbjct: 70 VKRALN--FSGEKPSTSILDTINHP----------KHMKNLSIEELEMLADELREEL--V 115 Query: 73 YGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI---TAYREHGH-ILACGVDASKIMAE 128 Y + GG +G + V + D I ++ + H IL + + Sbjct: 116 YVVSKTGGHLSASLGVAELTVALHHVFNTPDDKIIWDVGHQAYPHKILTARRSRMHTIRQ 175 Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFG 188 +G G + + S + F GH +S G G+A A R + + G Sbjct: 176 TSGLAGFPKRDE-------SVHDAFGAGHS--STSISAGLGMAVARDLLRKNNHVIAVIG 226 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVI-ENNQYAMGTSVSRASA 231 DGA GQ YE+ N A + N+I ++ +NNQ ++ T+ + A Sbjct: 227 DGAMTAGQAYEAMNNAGYLDSNLIIILNDNNQVSLPTATADGPA 270 >gi|189190882|ref|XP_001931780.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973386|gb|EDU40885.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1043 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 4/164 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ L + + I++I NNQ T + + S Sbjct: 421 VLLHGDAAFAAQGVVYETMGFHQLPSYHTGGTIHIIVNNQIGFTTDPRFSRSTPYCSDIA 480 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+M+ YR +GH+ +D + Sbjct: 481 KAIDAPVFHVNGDDVEALNFVCQLAADFRAEFKKDVVIDMVCYRKQGHNETDQPFFTQPL 540 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 ++ ++ K+LL K ++ D+ E + V +++ S Sbjct: 541 MYKKISQQPQTLDIYTKKLLEEKTFTKEDIDEHKAWVWGMLDES 584 >gi|302672165|ref|YP_003832125.1| transketolase subunit A TktA3 [Butyrivibrio proteoclasticus B316] gi|302396638|gb|ADL35543.1| transketolase subunit A TktA3 [Butyrivibrio proteoclasticus B316] Length = 276 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A + K D GDG +GQV+E+ A L N++ +++ Sbjct: 115 GSLGQGISVACGMALSAKLNNKDYRTYTLLGDGEIEEGQVWEAAMFAGFRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + + + + K+ +FN + VD D A++A +A Sbjct: 175 NNGLQIDGPIDQVCSPYPIDKKFEAFNFHVINVDAHDFDALRAAFKEA 222 >gi|229088570|ref|ZP_04220229.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock3-44] gi|228694745|gb|EEL48062.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock3-44] Length = 955 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 7/135 (5%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I++I NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHIIANNSVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A D A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAADLAIQYRTLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNH 308 T+ ++ + NH Sbjct: 467 --VTQPQVYKKIKNH 479 >gi|221640456|ref|YP_002526718.1| 2-oxoglutarate dehydrogenase E1 component [Rhodobacter sphaeroides KD131] gi|221161237|gb|ACM02217.1| 2-oxoglutarate dehydrogenase E1 component [Rhodobacter sphaeroides KD131] Length = 992 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L I+++ NNQ T+ S + + Sbjct: 390 RHTVLPILLHGDAAFAGQGVVAECFGLSGLVGHRTGGTIHIVVNNQIGFTTAPSFSRSSP 449 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+G D AV A + + ++I++ YR GH+ D Sbjct: 450 YPTDIALMVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDIFCYRRFGHNEGDEP 509 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + ++ + ++ +RL+ + EG++++++ + +N E A D +P Sbjct: 510 MFTNPSMYTSIKKHKTTLQLYTERLVRDGLIPEGEIEDMKAAFQAKLNEEFE-AGKDFKP 568 Query: 354 DPAE 357 + A+ Sbjct: 569 NKAD 572 >gi|171317180|ref|ZP_02906381.1| Transketolase domain protein [Burkholderia ambifaria MEX-5] gi|171097673|gb|EDT42505.1| Transketolase domain protein [Burkholderia ambifaria MEX-5] Length = 281 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 57/131 (43%), Gaps = 7/131 (5%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K SD F DG ++G ++E AA Sbjct: 109 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRNGSDAFVYTLFSDGELDEGAIWEGLMSAA 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 W L N+I +++ NNQ A G S + A + +F +VDG DI AVK D Sbjct: 169 HWKLDNLIAIVDVNNQQADGPS-THVMAFEPLVDKLEAFGWYTQRVDGNDIDAVKRAFDN 227 Query: 264 AVAYCRAHKGP 274 A R H P Sbjct: 228 A----RRHADP 234 >gi|157825366|ref|YP_001493086.1| 2-oxoglutarate dehydrogenase E1 component [Rickettsia akari str. Hartford] gi|157799324|gb|ABV74578.1| alpha-ketoglutarate decarboxylase [Rickettsia akari str. Hartford] Length = 928 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 20/187 (10%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L ++ ++ + NNQ + + +RAS Sbjct: 340 QRSKVKAILVHGDAAFCGQGVVAESLSMSQLTAYDIGGILHFVINNQLGFTANATDTRAS 399 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV + A+ Y + +++E++ YR GH+ Sbjct: 400 RYSTEFAKISAA---PILHVNGDDIEAVLKATNIALEYRQKFSKDVVVEIICYRKYGHNE 456 Query: 290 SDPANYRTREEINEMRSNHDP-----IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 D Y + N ++S P E V++ ++ N + ++ LKE E R ++ Sbjct: 457 GDEPMYTQGKMYNIIKSKPTPGNIYANELVKRGIIDNNYYAK--LKE-EFKTR--LDKEY 511 Query: 345 EFAQSDK 351 E AQS K Sbjct: 512 EQAQSYK 518 >gi|297735368|emb|CBI17808.3| unnamed protein product [Vitis vinifera] Length = 808 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 28/224 (12%) Query: 13 IKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQL 72 +K ALN S ++ +TS +D ++ P + LS L +L E+ + Sbjct: 147 VKRALN--FSGEKPSTSILDTINHP----------KHMKNLSIEELEMLADELREEL--V 192 Query: 73 YGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI---TAYREHGH-ILACGVDASKIMAE 128 Y + GG +G + V + D I ++ + H IL + + Sbjct: 193 YVVSKTGGHLSASLGVAELTVALHHVFNTPDDKIIWDVGHQAYPHKILTARRSRMHTIRQ 252 Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFG 188 +G G + + S + F GH +S G G+A A R + + G Sbjct: 253 TSGLAGFPKRDE-------SVHDAFGAGHS--STSISAGLGMAVARDLLRKNNHVIAVIG 303 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVI-ENNQYAMGTSVSRASA 231 DGA GQ YE+ N A + N+I ++ +NNQ ++ T+ + A Sbjct: 304 DGAMTAGQAYEAMNNAGYLDSNLIIILNDNNQVSLPTATADGPA 347 >gi|170699122|ref|ZP_02890177.1| Transketolase domain protein [Burkholderia ambifaria IOP40-10] gi|170135997|gb|EDT04270.1| Transketolase domain protein [Burkholderia ambifaria IOP40-10] Length = 268 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A A K +D+ C GDG N+G ++E+ AA + L N+I +++ Sbjct: 110 GSLGHGLSVGVGLALAAKRNGTDQKCYALVGDGELNEGAIWEAALFAAQFKLDNLIVIVD 169 Query: 217 NNQY-AMGTS---VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N + AMGT+ + + F +F + VDG D A+ Sbjct: 170 VNGFQAMGTTDEVIGLGDIRAKFE----AFGFDAISVDGHDETAI 210 >gi|146304627|ref|YP_001191943.1| transketolase subunit A [Metallosphaera sedula DSM 5348] gi|145702877|gb|ABP96019.1| transketolase subunit A [Metallosphaera sedula DSM 5348] Length = 273 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 9/134 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A K + V GDG ++G+V+E+ A NL N++ +IE Sbjct: 124 GSLGQGLSFGIGVATGIKMAKGTGRVFVIMGDGEQDEGEVWEAMTHAVARNLDNLVAIIE 183 Query: 217 NNQYAMGTSVSRASAQTNFSK--RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 N + + S + + R V + + DG DI +V +T+D+A+ + P Sbjct: 184 MNGFQLDESTKNVKPKEFLPEVWRAVGWRV--FNCDGHDIASVISTVDEALKTGK----P 237 Query: 275 IIIEMLTYRYRGHS 288 +I T R +G + Sbjct: 238 AVIFAETKRGKGFT 251 >gi|262201823|ref|YP_003273031.1| 2-oxoglutarate dehydrogenase, E1 subunit [Gordonia bronchialis DSM 43247] gi|262085170|gb|ACY21138.1| 2-oxoglutarate dehydrogenase, E1 subunit [Gordonia bronchialis DSM 43247] Length = 1308 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 12/185 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L ++++ NNQ T+ + + + Sbjct: 720 LPLMLHGDAAFAGQGVVPETLNLAMLPGYRTGGTVHIVVNNQVGFTTAPEHSRSSEYCTD 779 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV Y + + ++I+++ +R RGH SM+ Sbjct: 780 VAKMIGAPIFHVNGDDPEACVWVAKLAVDYRQTYHKDVVIDLVCFRRRGHNEGDDPSMTQ 839 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 PA Y + +R ++ E + R + +E L++ + + ++ N E + Sbjct: 840 PAMYDVIDTKRGVRKSY--TEALIGRGDISTKEAEDALRDYQGQLERVFNEVKELEKYRP 897 Query: 352 EPDPA 356 EP P+ Sbjct: 898 EPSPS 902 >gi|291543964|emb|CBL17073.1| Transketolase, N-terminal subunit [Ruminococcus sp. 18P13] Length = 279 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + KY + D GDG +GQV+E+ AA + L N+ +++ Sbjct: 117 GSLGQGISAACGMALSAKYNQKDYRVYTVLGDGEIEEGQVWEAAMFAAHYGLDNLTAIVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + ++ S+ + +F + +D D + ++ D+A Sbjct: 177 NNGLQIDGPITEVSSPEPIPDKFAAFGWHVITMDAHDFQDIERAFDEA 224 >gi|172061331|ref|YP_001808983.1| transketolase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171993848|gb|ACB64767.1| Transketolase domain protein [Burkholderia ambifaria MC40-6] Length = 268 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A A K +D+ C GDG N+G ++E+ AA + L N+I +++ Sbjct: 110 GSLGHGLSVGVGLALAAKRNGTDQKCYALVGDGELNEGAIWEAALFAAQFKLDNLIVIVD 169 Query: 217 NNQY-AMGTS---VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N + AMGT+ + + F +F + VDG D A+ Sbjct: 170 VNGFQAMGTTDEVIGLGDIRAKFE----AFGFDAISVDGHDETAI 210 >gi|330998802|ref|ZP_08322529.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Parasutterella excrementihominis YIT 11859] gi|329576016|gb|EGG57535.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Parasutterella excrementihominis YIT 11859] Length = 507 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 23/180 (12%) Query: 129 LTGR-QGGISKGKGGSMHMFSTKNG------FYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR Q + K K + F+ N FY GH +SL G+A A ++ D Sbjct: 2 LTGRAQYYLDKSKFTEIGEFTDPNESPEYDIFYAGH--TSPSISLAFGLAKARSLKKEDF 59 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS------RASAQTNF 235 V GDG+ + G +E N A N N I ++ +NQ A+ + R +TN Sbjct: 60 NIVAFIGDGSLSGGVAFEGLNNAGKLNDNFIVIVNDNQMAIAENHGSLYDNLRELRETNG 119 Query: 236 SKRGVSFNIPGMQ----VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 F G +G D+ +V + KA + K PI++ + T + G++ ++ Sbjct: 120 QSEHNYFKSLGYDYIYVAEGNDLESVINALKKA----KDTKNPIVVHLNTQKGEGYAPAE 175 >gi|284033067|ref|YP_003382998.1| 2-oxoglutarate dehydrogenase, E1 subunit [Kribbella flavida DSM 17836] gi|283812360|gb|ADB34199.1| 2-oxoglutarate dehydrogenase, E1 subunit [Kribbella flavida DSM 17836] Length = 1285 Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 19/188 (10%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG V E+ N++ L I+VI NNQ TS + + + + Sbjct: 704 VLVHGDAAFAGQGVVAETLNLSQLRGYRTGGTIHVIVNNQVGFTTSPASSRSSMYCTDVA 763 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 P V+G D A A Y +A ++I+++ YR RGH+ D ++ T+ Sbjct: 764 RMVQAPIFHVNGDDPEACIRVASLAFEYRQAFNKDVVIDLVCYRRRGHNEGDDPSF-TQP 822 Query: 300 EINEMRSNHDPIEQVR--KRLLHNKWASEGDL--KEIEMNVR----KIINNSVEFAQSDK 351 + +D IEQ R ++L GD+ +E E +R ++ E ++ Sbjct: 823 LM------YDLIEQKRSVRKLYTEALIGRGDITVEEAEQAMRDFQQRLERVFTEVREAKS 876 Query: 352 EPDPAELY 359 +PD Y Sbjct: 877 QPDTPAPY 884 >gi|307293435|ref|ZP_07573281.1| 2-oxoglutarate dehydrogenase, E1 subunit [Sphingobium chlorophenolicum L-1] gi|306881501|gb|EFN12717.1| 2-oxoglutarate dehydrogenase, E1 subunit [Sphingobium chlorophenolicum L-1] Length = 936 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 9/139 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRASAQTNF 235 + V+ GD A A QG V+E + + N I+ I NNQ TS SR S + Sbjct: 334 LPVLIHGDAAFAGQGIVWECLGFSGVSGYNTGGCIHFIVNNQIGFTTSPQFSRGSPYPSD 393 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 +GV P + ++G D AV A+ Y + I+I+M YR GH+ D ++ Sbjct: 394 VAKGV--QAPILHINGDDPEAVTFACKLAMEYRQTFHRDIVIDMWCYRRFGHNEGDEPSF 451 Query: 296 RTREEINEMRSNHDPIEQV 314 + ++R H P+ V Sbjct: 452 TQPQMYAKIR-QHPPVSDV 469 >gi|238800242|gb|ACR46716.2| putative transketolase N-terminal subunit [Pseudomonas syringae pv. tabaci] gi|330984931|gb|EGH83034.1| transketolase, N-terminal subunit [Pseudomonas syringae pv. lachrymans str. M301315] Length = 282 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 90/226 (39%), Gaps = 11/226 (4%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 IRR + GQ+ G G VG G L + + E +Q Y GH A Sbjct: 20 IRRHALRMGQVQGQGYVGQALGAADLLAVSYFHALNYRPEDPEWEQRDRFYLSIGH-YAI 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FAN 174 + A+ I AE+ + G S S + G I G + G GIA Sbjct: 79 ALYAALIEAEIVPLDELETYGSDDSRLPMSGMATYTPGMEITGGSLGHGLGIAVGACLGL 138 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQ 232 K + S DG N+G +E+ A+ W L N+I +++ NNQ A G S S A Sbjct: 139 KRKASRSFVYNLLSDGELNEGSTWEAAMSASHWKLDNLIAIVDVNNQQADGHS-SEVLAF 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 R +F +VDG D+ A+ A D A + A II + Sbjct: 198 EPIVDRWQAFGWFTQRVDGNDLNALVAAFDAARQHVGAQPRVIICD 243 >gi|148657499|ref|YP_001277704.1| 2-oxoglutarate dehydrogenase E1 component [Roseiflexus sp. RS-1] gi|148569609|gb|ABQ91754.1| 2-oxoglutarate dehydrogenase E1 component [Roseiflexus sp. RS-1] Length = 951 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 20/188 (10%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A QG V E+ N++ L + I++I NNQ TS + Sbjct: 360 RHASLPILIHGDAAFPGQGIVAETLNLSNLAGYSTGGTIHIIVNNQIGFTTSPHEGRSTL 419 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S F IP + V+ D+ A A AY +I+++ YR GH+ D Sbjct: 420 YASDLAKGFEIPIVHVNADDVEGCIAVARMAYAYRERFGKDFLIDLVGYRRWGHNEGDEP 479 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWAS----EG--DLKEIEMNVRKIINNSVEFA 347 + T+ + + + H + + +WAS EG E E VRK+ + ++ A Sbjct: 480 AF-TQPRMYAIIARHPTVRE--------QWASKLIAEGVVSATEAEEMVRKVWDR-LQQA 529 Query: 348 QSDKEPDP 355 +SD E P Sbjct: 530 RSDAEAHP 537 >gi|58039347|ref|YP_191311.1| 2-oxoglutarate dehydrogenase E1 component [Gluconobacter oxydans 621H] gi|58001761|gb|AAW60655.1| 2-Oxoglutarate dehydrogenase E1 component [Gluconobacter oxydans 621H] Length = 885 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 41/181 (22%), Positives = 83/181 (45%), Gaps = 5/181 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG VYE+ +++ L ++VI NNQ T S A + Sbjct: 294 RQHHLGILVHGDAAFAGQGVVYETLSLSKLEGYRTGGTVHVIINNQIGFTTVQSDAHSGL 353 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + S P + V+G D AV A + R + I+++++ YR GH+ +D Sbjct: 354 HNTDIAKSVQAPILHVNGDDPEAVSRCAFLAHEWRRTFQSDIVLDVVCYRRHGHNEADEP 413 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + ++ ++S L+ +E +++E+ + ++ + E +++ +P Sbjct: 414 AFTQPAMVHAIQSRATTRSLYADHLIRTGVMTEAEVEEMWAHFQRRLEEQFEKSKT-YQP 472 Query: 354 D 354 D Sbjct: 473 D 473 >gi|266622651|ref|ZP_06115586.1| transketolase [Clostridium hathewayi DSM 13479] gi|288865606|gb|EFC97904.1| transketolase [Clostridium hathewayi DSM 13479] Length = 279 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K ++ D GDG +GQV+E+ A L N++ +++ Sbjct: 116 GSLGQGISAAVGMALSAKLQKKDYRVYTLLGDGEIEEGQVWEAAMFAGYRKLDNLVVIVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + V + K+ +FN + +DG D + +++A A R KG P Sbjct: 176 NNGLQIDGPVDEVCSPYPIDKKFEAFNFHVICIDGHDF----SQIEQAFAEARNTKGMPT 231 Query: 276 IIEMLTYRYRGHSM 289 I T + +G S Sbjct: 232 AIIAKTIKGKGVSF 245 >gi|302869667|ref|YP_003838304.1| 2-oxoglutarate dehydrogenase, E1 subunit [Micromonospora aurantiaca ATCC 27029] gi|302572526|gb|ADL48728.1| 2-oxoglutarate dehydrogenase, E1 subunit [Micromonospora aurantiaca ATCC 27029] Length = 1247 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 101/249 (40%), Gaps = 48/249 (19%) Query: 82 CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA--CGVDASKIMAELTGRQGGISKG 139 C G + V++GM A+R ++LA G KI +E G S Sbjct: 557 CSAEAGLDEVVIGM------------AHRGRLNVLANIVGKPYEKIFSEFEGHLDPRSTQ 604 Query: 140 KGGSMHMFSTKNGFY----GGHGIVGAQVSLGT----------GIAFANKYRRSDKI--- 182 G + +NG + G H + + V+ + GI A + R K+ Sbjct: 605 GSGDVKYHLGQNGKFTTPDGEHAVKVSVVANPSHLEAVDPVLEGIVRAKQDRIDLKLEGY 664 Query: 183 ---CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRASAQT 233 + GD A A QG V E+ N++ L ++V+ NNQ T+ SR+S + Sbjct: 665 TVLPLAVHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHVVVNNQVGFTTAPEYSRSSLYS 724 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------ 287 R + P V+G D AV A Y +A ++I+M+ YR RGH Sbjct: 725 TDVARMI--QAPIFHVNGDDPEAVVRVARLAFEYRQAFNKDVVIDMVCYRRRGHNEGDDP 782 Query: 288 SMSDPANYR 296 SMS+P Y+ Sbjct: 783 SMSNPEMYK 791 >gi|152965196|ref|YP_001360980.1| alpha-ketoglutarate decarboxylase [Kineococcus radiotolerans SRS30216] gi|151359713|gb|ABS02716.1| 2-oxoglutarate dehydrogenase, E1 subunit [Kineococcus radiotolerans SRS30216] Length = 1287 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 10/137 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N++ L ++V+ NNQ T+ + + + + Sbjct: 699 LPVLLHGDAAFAGQGVVAETLNLSQLRGYRTGGSVHVVINNQVGFTTAPASSRSSVYCTD 758 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 G P V+G D A A + +A + ++I+M+ YR RGH SM+ Sbjct: 759 VGRMIQAPIFHVNGDDPEACVRVAQLAFEFRQAFEKDVVIDMVCYRRRGHNEGDDPSMTQ 818 Query: 292 PANYRTREEINEMRSNH 308 P Y E+ +R ++ Sbjct: 819 PLMYNLIEKKRSVRKSY 835 >gi|311032776|ref|ZP_07710866.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus sp. m3-13] Length = 958 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 24/194 (12%) Query: 169 GIAFANKYRRSDK----------ICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYV 214 G+A A++ RS+K V+ GD A +G V E+ N+ L I++ Sbjct: 339 GVARASQEDRSEKGYPKQNKQSSFSVLVHGDAAFPGEGVVAETLNLTKLKGYATGGTIHI 398 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 I NN T+ S + + S + IP + V+ D + A M A Y + + Sbjct: 399 IANNLLGFTTNYSDSRSTKYASDLAKGYEIPVIHVNADDPESCLAVMVFAYEYRKRFEKD 458 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 I+I+++ YR GH+ D AN T+ + E +NH I + + L N+ G L E E Sbjct: 459 IVIDLIGYRRFGHNEMDDANV-TQPLLYEKINNHPVIAEKYGKELVNR----GILSEEEF 513 Query: 335 NVRKIINNSVEFAQ 348 +K EF Q Sbjct: 514 TGKK-----TEFMQ 522 >gi|32475700|ref|NP_868694.1| 2-oxoglutarate dehydrogenase E1 component [Rhodopirellula baltica SH 1] gi|32446242|emb|CAD76071.1| alpha-ketoglutarate dehydrogenase E1 [Rhodopirellula baltica SH 1] gi|327541382|gb|EGF27922.1| alpha-ketoglutarate decarboxylase [Rhodopirellula baltica WH47] Length = 969 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 9/193 (4%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R D + ++ GD A A +G V E+ N++ L ++V+ NNQ T + T Sbjct: 379 RQDVMTILIHGDAAFAGEGVVQETLNLSELKGYRTGGTLHVVINNQVGFTTEPDEGRSTT 438 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + IP V+G D AV + A+ + + ++I++ YR GH+ D Sbjct: 439 YATDIAKMLQIPIFHVNGEDPEAVAQVVSLAMDFRKEFHRDVVIDLYAYRRWGHNEGDEP 498 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE- 352 + + E+ +Q RLL +E + EI + + + + EF S E Sbjct: 499 RFTQPQMYAEIDRRPGVRQQYLNRLLKLGKITEAEADEISRDRTEKLES--EFEASKHES 556 Query: 353 --PDPAELYSDIL 363 PD L ++ + Sbjct: 557 FVPDTQTLAANWM 569 >gi|148550476|ref|YP_001270578.1| transketolase domain-containing protein [Pseudomonas putida F1] gi|148514534|gb|ABQ81394.1| transketolase subunit A [Pseudomonas putida F1] Length = 282 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 67/227 (29%), Positives = 93/227 (40%), Gaps = 17/227 (7%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 IRR + GQ+ G G VG G L + + E +Q Y GH A Sbjct: 20 IRRHALRMGQVQGQGYVGQALGAADLLAVSYFHALRYQPHNPEWEQRDRFYLSIGH-YAI 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FAN 174 + A+ I A + + + G S S + G I G + G GIA Sbjct: 79 ALYAALIEAGVIPLEELETYGSDDSRLPMSGMAAYTPGMEITGGSLGHGLGIAVGACLGL 138 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQ 232 K + SD DG N+G +E+ A+ W L N+I +++ NNQ A G S S A Sbjct: 139 KRKNSDSFVYNLLSDGELNEGSTWEAAMSASHWKLNNLIAIVDVNNQQADGYS-SEVLAF 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--PIII 277 R +F +VDG DI A+ A D A R H+G P +I Sbjct: 198 EPIVDRWQAFGWFTQRVDGNDIGALVAAFDAA----RNHQGAQPRVI 240 >gi|261868414|ref|YP_003256336.1| 2-oxoglutarate dehydrogenase E1 component [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413746|gb|ACX83117.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Aggregatibacter actinomycetemcomitans D11S-1] Length = 935 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 5/166 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + V GD A A QG V E+ N++ V I ++ NNQ TS + T F + Sbjct: 353 LAVTVHGDSAVAGQGIVQETLNMSNARGYKVGGTIRIVINNQIGFTTSNPNDTRSTEFCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 P + V+G D AV AV Y A K I I++++YR GH+ +D Sbjct: 413 DIAKMIQAPIIHVNGDDPEAVVFAARMAVEYRNAFKRDIFIDLISYRRHGHNEADEPLAT 472 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 ++ + P + RL+ SE D EI R ++N Sbjct: 473 QPMMYGIIKKHPTPPKVYAARLIQEGTISEEDATEITNLYRDALDN 518 >gi|255505904|ref|ZP_05348816.3| transketolase [Bryantella formatexigens DSM 14469] gi|255265214|gb|EET58419.1| transketolase [Bryantella formatexigens DSM 14469] Length = 299 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 7/135 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K D GDG +GQV+E+ A L N++ +++ Sbjct: 135 GSLGQGISAACGMALSAKMSNEDYRVYTLLGDGEIQEGQVWEAAMFAGARKLDNLVVIVD 194 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + + K+ +FN + V DG D +KA D+A RA KG P Sbjct: 195 NNGLQIDGRIEDVCNPYPIDKKFEAFNFHVINVADGNDFDQLKAAFDEA----RATKGMP 250 Query: 275 IIIEMLTYRYRGHSM 289 I M T + +G S Sbjct: 251 TAIVMKTVKGKGVSF 265 >gi|327440164|dbj|BAK16529.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase component [Solibacillus silvestris StLB046] Length = 935 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 5/141 (3%) Query: 175 KYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRAS 230 K+ S+ ++ GD A A QG V E FN + + +I NN T + + Sbjct: 344 KHDPSNAFGIILHGDAAFAGQGIVTEGFNFSQTEGFTTGGTVQIIANNMIGFTTELHDSR 403 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + S ++IP + V+ V A Y K I+I+++ YR GH+ + Sbjct: 404 SSIYSSDPAKGYDIPVIHVNADSPETVAAVGRFVAEYRAKFKKDIVIDLIGYRRYGHNET 463 Query: 291 DPANYRTREEINEMRSNHDPI 311 D T E ++ S H+PI Sbjct: 464 DDPTV-TNPETYKLVSKHEPI 483 >gi|303256946|ref|ZP_07342960.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderiales bacterium 1_1_47] gi|302860437|gb|EFL83514.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderiales bacterium 1_1_47] Length = 585 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 23/180 (12%) Query: 129 LTGR-QGGISKGKGGSMHMFSTKNG------FYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR Q + K K + F+ N FY GH +SL G+A A ++ D Sbjct: 80 LTGRAQYYLDKSKFTEIGEFTDPNESPEYDIFYAGH--TSPSISLAFGLAKARSLKKEDF 137 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS------RASAQTNF 235 V GDG+ + G +E N A N N I ++ +NQ A+ + R +TN Sbjct: 138 NIVAFIGDGSLSGGVAFEGLNNAGKLNDNFIVIVNDNQMAIAENHGSLYDNLRELRETNG 197 Query: 236 SKRGVSFNIPGMQ----VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 F G +G D+ +V + KA + K PI++ + T + G++ ++ Sbjct: 198 QSEHNYFKSLGYDYIYVAEGNDLESVINALKKA----KDTKNPIVVHLNTQKGEGYAPAE 253 >gi|260425472|ref|ZP_05779452.1| 2-oxoglutarate dehydrogenase E1 component [Citreicella sp. SE45] gi|260423412|gb|EEX16662.1| 2-oxoglutarate dehydrogenase E1 component [Citreicella sp. SE45] Length = 662 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 41/188 (21%), Positives = 81/188 (43%), Gaps = 5/188 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R + ++ GD A A QG V E F ++ L I+++ NNQ T+ + Sbjct: 54 NDVERRQVLPILLHGDAAFAGQGVVAECFALSGLRGHRTGGTIHIVVNNQIGFTTAPHFS 113 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D AV A + + ++I+M YR GH+ Sbjct: 114 RSSPYPTDNALVVEAPIFHVNGDDPEAVVHAAKVATEFRQKFGKDVVIDMFCYRRFGHNE 173 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + +++S+ + RL+ + EG++++++ + +N E ++ Sbjct: 174 GDEPMFTNPVMYKQIKSHKTTLTLYTDRLVKDGLIPEGEIEDMKAAFQAHLNEEFEAGKT 233 Query: 350 DKEPDPAE 357 K P+ A+ Sbjct: 234 YK-PNKAD 240 >gi|84684238|ref|ZP_01012140.1| 2-oxoglutarate dehydrogenase, E1 component [Maritimibacter alkaliphilus HTCC2654] gi|84667991|gb|EAQ14459.1| 2-oxoglutarate dehydrogenase, E1 component [Rhodobacterales bacterium HTCC2654] Length = 991 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 11/224 (4%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQ 196 G ++H+ T N H V LG A ++ + + I V+ GD A A QG Sbjct: 348 GNTVHLSLTANP---SHLEAVNPVVLGKARAKGDQLKDPEHHKVIPVLLHGDAAFAGQGV 404 Query: 197 VYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 V E F ++ + I+++ NNQ T+ S + + + P V+G D Sbjct: 405 VAECFQLSGIRGHRTGGTIHIVVNNQIGFTTAPSFSRTSPYPTDIALMVEAPIFHVNGDD 464 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 AV A + + ++I++ YR GH+ D + E++++ ++ Sbjct: 465 PEAVVHAAKVATEFRQKFHKDVVIDIFCYRRFGHNEGDEPMFTNPLMYKEIKTHKTTLQL 524 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 RL+ + EG++++++ + +N E + D +P+ A+ Sbjct: 525 YTDRLVKDGLIPEGEIEDMKAAFQAHLNEEFETGK-DYKPNKAD 567 >gi|332289246|ref|YP_004420098.1| transketolase [Gallibacterium anatis UMN179] gi|330432142|gb|AEC17201.1| transketolase [Gallibacterium anatis UMN179] Length = 273 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ +GIAF+++ R GDG N+GQ +E+F A L N+ +++ Sbjct: 114 GSLGQGLSIASGIAFSHQLRNLPNRTFCIVGDGELNEGQCWEAFQFIAHHRLTNLTVMVD 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N+ + +++ N ++ +F + VDG D++ + Sbjct: 174 YNKMQLDGALTEIIDPFNLQEKFTAFGFNCLAVDGADVQML 214 >gi|166363844|ref|YP_001656117.1| transketolase-like protein [Microcystis aeruginosa NIES-843] gi|166086217|dbj|BAG00925.1| transketolase-like protein [Microcystis aeruginosa NIES-843] Length = 274 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 3/102 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G GIA A+K + + + C GDG N+G ++E+ A+ + L N++ +++ Sbjct: 109 GSLGHGLSVGVGIALASKIKGTGQRCFALVGDGEINEGSIWEALLFASHFQLSNLLVIVD 168 Query: 217 NNQY-AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N Y AMGT+ + + +F +VDG D +A+ Sbjct: 169 ANGYQAMGTT-QEVMNLGQIADKFRAFGFDCREVDGHDEKAL 209 >gi|218961550|ref|YP_001741325.1| putative Transketolase [Candidatus Cloacamonas acidaminovorans] gi|167730207|emb|CAO81119.1| putative Transketolase [Candidatus Cloacamonas acidaminovorans] Length = 630 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 7/140 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S GTG A A++ + V GDG +GQ+ E+ A + L N+I +I+ Sbjct: 120 GNLGQGLSAGTGFALASRINKIPYNVYVFMGDGEQQKGQISEARRFAVKYCLNNIIAIID 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NQ + S+ Q N K S M+VDG +I + +D A RA + P + Sbjct: 180 YNQLQISGSIHNVMPQ-NIRKNWESDGWKVMEVDGHNIPLILTALDNA----RAFQQPTM 234 Query: 277 IEMLTYRYRGHS-MSDPANY 295 I T +G + M + A Y Sbjct: 235 ILAHTVMGKGVTFMENNAQY 254 >gi|163869362|ref|YP_001610618.1| 2-oxoglutarate dehydrogenase E1 component [Bartonella tribocorum CIP 105476] gi|161019065|emb|CAK02623.1| alpha-ketoglutarate dehydrogenase [Bartonella tribocorum CIP 105476] Length = 999 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG + E+F ++ L V ++VI NNQ T+ + + Sbjct: 396 RSKVLPLLIHGDAAFAGQGVIQETFGLSGLKGYRVAGSLHVIINNQIGFTTAPRFSRSSP 455 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV A+ + + P++I+M YR GH+ D Sbjct: 456 YPSDVAKMIDAPIFHVNGDDPEAVVFVAKIAMEFRQIFHKPVVIDMFCYRRYGHNEGDEP 515 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ +L+ S ++++ + R + + +E + S K P Sbjct: 516 SFTQPLMYKAIRNHKTTLQIYSDQLIAEGIVSSEEIEQQKKLWRDKLEDELEASASYK-P 574 Query: 354 DPAE 357 + A+ Sbjct: 575 NKAD 578 >gi|146276134|ref|YP_001166293.1| 2-oxoglutarate dehydrogenase E1 component [Rhodobacter sphaeroides ATCC 17025] gi|145554375|gb|ABP68988.1| 2-oxoglutarate dehydrogenase E1 component [Rhodobacter sphaeroides ATCC 17025] Length = 987 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L I+++ NNQ T+ S + + Sbjct: 385 RHTVLPILLHGDAAFAGQGVVAECFGLSGLVGHRTGGTIHIVVNNQIGFTTAPSFSRSSP 444 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+G D AV A + + ++I++ YR GH+ D Sbjct: 445 YPTDIALMVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDIFCYRRFGHNEGDEP 504 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + ++ + ++ +RL+ + EG++++++ + +N E A D +P Sbjct: 505 MFTNPAMYTSIKKHKTTLQLYTERLVQDGLIPEGEIEDMKAAFQARLNEEFE-AGKDFKP 563 Query: 354 DPAE 357 + A+ Sbjct: 564 NKAD 567 >gi|269925454|ref|YP_003322077.1| 2-oxoglutarate dehydrogenase, E1 subunit [Thermobaculum terrenum ATCC BAA-798] gi|269789114|gb|ACZ41255.1| 2-oxoglutarate dehydrogenase, E1 subunit [Thermobaculum terrenum ATCC BAA-798] Length = 945 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 10/179 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG V E+ N++ L I++I NNQ T S + T Sbjct: 347 LAILIHGDAAFPGQGIVAETLNLSRLPGYRTGGTIHIIANNQLGFTTEPSEGRSTTYAGD 406 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 F IP + V+ D A T A Y + +I+++ YR GH+ SD ++ T Sbjct: 407 LAKGFEIPTVHVNADDPHACILTARLAETYRETFRKDFMIDLIGYRRYGHNESDEPSF-T 465 Query: 298 REEINEMRSNHDPIEQV-RKRLLHNKWASEGDLK----EIEMNVRKIINNSVEFAQSDK 351 + + E H + ++ ++L+ S +++ ++E +R+ + VE +S + Sbjct: 466 QPLMYEKIRKHPTVREIFAQKLIQRGIVSTEEVQAFVSKVEGKLRRAMQAEVEDGRSPE 524 >gi|170740405|ref|YP_001769060.1| 2-oxoglutarate dehydrogenase E1 component [Methylobacterium sp. 4-46] gi|168194679|gb|ACA16626.1| 2-oxoglutarate dehydrogenase, E1 subunit [Methylobacterium sp. 4-46] Length = 986 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 4/179 (2%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 +R+ + ++ GD A A QG V E ++ L I+ I NNQ T + + Sbjct: 382 QRTSVLPLLIHGDAAFAGQGVVAECLGLSGLKGHRTGGSIHFIINNQIGFTTDPRFSRSS 441 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 S P +G D AV A Y + P++I+ML YR GH+ D Sbjct: 442 PYPSDVAKMVEAPIFHCNGDDPEAVVFAAKVATEYRQKFHKPVVIDMLCYRRFGHNEGDE 501 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + + +R + +E KRL+ E DL+ + R +++ + A + K Sbjct: 502 PAFTQPKMYKIIRKHPSTLEIYGKRLVEAGAVKEADLEARKSEFRSTLDSEFDVANAYK 560 >gi|317122774|ref|YP_004102777.1| transketolase subunit A [Thermaerobacter marianensis DSM 12885] gi|315592754|gb|ADU52050.1| transketolase subunit A [Thermaerobacter marianensis DSM 12885] Length = 290 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 6/140 (4%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G +S+ G+A A K D V GDG +GQ++E+ A L N Sbjct: 117 GIEASTGSLGQGLSIAAGMALAGKLDGKDYRVFVLLGDGEIQEGQIWEAAMFAGHHRLDN 176 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +I +++ N+Y + +V + + + +F ++DG D+ V +++A RA Sbjct: 177 LIAILDYNRYQLDDAVEAIVSLEPVADKWRAFGWDVEEIDGHDLAQVVPALERA----RA 232 Query: 271 HKG-PIIIEMLTYRYRGHSM 289 G P++I T + +G S Sbjct: 233 GTGRPVMIIAHTVKGKGVSF 252 >gi|209883734|ref|YP_002287591.1| oxoglutarate dehydrogenase [Oligotropha carboxidovorans OM5] gi|209871930|gb|ACI91726.1| oxoglutarate dehydrogenase [Oligotropha carboxidovorans OM5] Length = 983 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 8/185 (4%) Query: 180 DKICVVCF---GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 D+I V+ GD A A QG V E F ++ L ++ I NNQ T + + Sbjct: 382 DRISVLPLLMHGDAAFAGQGVVAECFALSDLKGYRTGGSVHFIVNNQIGFTTYPRYSRSS 441 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 S + P V+G D AV A+ + + P++I+M YR GH+ D Sbjct: 442 PYPSDVAKMIDAPIFHVNGDDPEAVVFAAKVAIEFRQRFHKPVVIDMFCYRRHGHNEGDE 501 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 + ++ + ++ KRL+ + +EG++++ + + R ++ +E S K Sbjct: 502 PAFTQPVMYKKIGGHASTLDIYSKRLIADGVVTEGEVEKAKADWRARLDAELEAGTSYK- 560 Query: 353 PDPAE 357 P+ A+ Sbjct: 561 PNKAD 565 >gi|115940270|ref|XP_001195501.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 855 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 13/191 (6%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A +Y R D + ++ GD A A QG VYE+F+++ L + I+V+ NNQ Sbjct: 463 AEQYYRGDTEGDQVMSILMHGDAAFAGQGIVYETFHLSDLPEYSTHGTIHVVINNQIGFT 522 Query: 224 TS--VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 T SR+S R V N P V+ D AV A + +K ++I+++ Sbjct: 523 TDPRFSRSSPYCTDVARVV--NAPIFHVNADDPEAVNHVCQVASKWRCRYKSDVVIDLVC 580 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR GH+ D + ++R + ++Q ++ + +E + +E + KI Sbjct: 581 YRRNGHNEMDEPLFTQPLMYKKIRGHRPVLKQYAEQKIQEGIMTEQEFEEEQDGYDKICE 640 Query: 342 NSVEFAQSDKE 352 ++ + A+ E Sbjct: 641 DAYQNAKKVTE 651 >gi|302308342|ref|NP_985230.2| AER374Cp [Ashbya gossypii ATCC 10895] gi|299789409|gb|AAS53054.2| AER374Cp [Ashbya gossypii ATCC 10895] Length = 1004 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 19/198 (9%) Query: 184 VVCFGDGA-ANQGQVYES---FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ ++ A I+VI NNQ T A + + S G Sbjct: 392 VLLHGDAAFAAQGVVYETMGFLHLPAYSTGGTIHVITNNQIGFTTDPRFARSTSYPSDIG 451 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+ DI AV + A + II+++ +R GH+ +D ++ Sbjct: 452 KTIDAPIFHVNANDIEAVNFIFNLAAEWRATFHTDAIIDVVGWRKHGHNETDQPSFTQPL 511 Query: 300 EINEMRSNHDPIEQVRKRLL------------HNKWASEGDLKEIEMNVRKIINNSVEFA 347 ++ I+ K+LL H KW G +E ++ +S E+ Sbjct: 512 MYKQIAKQPSVIDVYTKKLLDEGSMTNEQIDTHKKWVW-GLFEEAFSKAKEYKPSSREWL 570 Query: 348 QSDKE--PDPAELYSDIL 363 + E P EL ++IL Sbjct: 571 TAAWENFKSPKELATEIL 588 >gi|296416600|ref|XP_002837963.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633857|emb|CAZ82154.1| unnamed protein product [Tuber melanosporum] Length = 1047 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 21/199 (10%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ AL + I++I NNQ T A + S Sbjct: 431 VLVHGDAAFAAQGVVYETMGFHALPAYSTGGTIHLIVNNQIGFTTDPRFARSTPYCSDIA 490 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 S + P V+ D+ AV + A + K ++I+++ YR GH+ +D ++ Sbjct: 491 KSIDAPIFHVNADDVEAVNFVCELASDWRAEFKRDVVIDLVCYRKYGHNETDQPSFTQPL 550 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS-DKEP----- 353 ++ +++ RL +E D++E + V ++ +S FA+S D +P Sbjct: 551 MYRKIAEKQPALDRYISRLKAEGTFTESDIQEHKDWVWSMLEDS--FAKSKDYQPTAREW 608 Query: 354 ---------DPAELYSDIL 363 P EL ++IL Sbjct: 609 LASAWNGFKTPKELSTEIL 627 >gi|315503851|ref|YP_004082738.1| 2-oxoglutarate dehydrogenase, e1 subunit [Micromonospora sp. L5] gi|315410470|gb|ADU08587.1| 2-oxoglutarate dehydrogenase, E1 subunit [Micromonospora sp. L5] Length = 1247 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 101/249 (40%), Gaps = 48/249 (19%) Query: 82 CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA--CGVDASKIMAELTGRQGGISKG 139 C G + V++GM A+R ++LA G KI +E G S Sbjct: 557 CSAEAGLDEVVIGM------------AHRGRLNVLANIVGKPYEKIFSEFEGHLDPRSTQ 604 Query: 140 KGGSMHMFSTKNGFY----GGHGIVGAQVS----------LGTGIAFANKYRRSDKI--- 182 G + +NG + G H + + V+ + GI A + R K+ Sbjct: 605 GSGDVKYHLGQNGKFTTPDGEHAVKVSVVANPSHLEAVDPVLEGIVRAKQDRIDLKLEGY 664 Query: 183 ---CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRASAQT 233 + GD A A QG V E+ N++ L ++V+ NNQ T+ SR+S + Sbjct: 665 TVLPLAVHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHVVVNNQVGFTTAPEYSRSSLYS 724 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------ 287 R + P V+G D AV A Y +A ++I+M+ YR RGH Sbjct: 725 TDVARMI--QAPIFHVNGDDPEAVVRVARLAFEYRQAFNKDVVIDMVCYRRRGHNEGDDP 782 Query: 288 SMSDPANYR 296 SMS+P Y+ Sbjct: 783 SMSNPEMYK 791 >gi|195144318|ref|XP_002013143.1| GL23966 [Drosophila persimilis] gi|194102086|gb|EDW24129.1| GL23966 [Drosophila persimilis] Length = 626 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 2/101 (1%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++G G+A+ K + ++D V GDG + +G V+ES + A +NL N+ Sbjct: 120 GTGSLGQGVAVGAGMAYVGKNFDKADYRTYVIVGDGESAEGSVWESLHFAGYYNLDNLCV 179 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + + N+ + S + R SF + VDG DI Sbjct: 180 IFDVNRLGQSEATSLQHKMEVYRDRLESFGFNALVVDGHDI 220 >gi|312132149|ref|YP_003999489.1| 2-oxoglutarate dehydrogenase, e1 subunit [Leadbetterella byssophila DSM 17132] gi|311908695|gb|ADQ19136.1| 2-oxoglutarate dehydrogenase, E1 subunit [Leadbetterella byssophila DSM 17132] Length = 916 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 15/193 (7%) Query: 180 DKIC-VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 DKI ++ GD + A QG VYE ++ L V I+ I NNQ T A + Sbjct: 333 DKILPIIIHGDASLAGQGVVYEVNQMSNLPGYYVGGAIHFIINNQIGFTTDNRDARSSIY 392 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S + P + V+G D AV M+ A+ + + I I+M+ YR GH+ +D Sbjct: 393 SSDVAKMLDTPILHVNGDDAEAVVYAMELAIEFRQEFNKDIYIDMICYRKYGHNEADEPK 452 Query: 295 YRTREEINEMRSNH-DPIEQVRKRLLHNKWASEGD---LKE-----IEMNVRKIINNSVE 345 + T+ + E+ S H P E ++L + ++ D LKE ++ + K+ N + Sbjct: 453 F-TQPGMYEIISKHPSPREIYIEKLKSDGTITDNDARTLKEQFDNNLQDLLSKVKQNQLP 511 Query: 346 FAQSDKEPDPAEL 358 + E D AEL Sbjct: 512 YELPKLERDWAEL 524 >gi|167759650|ref|ZP_02431777.1| hypothetical protein CLOSCI_02008 [Clostridium scindens ATCC 35704] gi|167662776|gb|EDS06906.1| hypothetical protein CLOSCI_02008 [Clostridium scindens ATCC 35704] Length = 278 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K GDG +GQV+E+ +AA L N++ +++ Sbjct: 115 GSLGQGISAAVGMAISAKLSGDGYRVYTLLGDGEIQEGQVWEASMLAAHRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 NN + ++ ++ K+ +FN + +DG D A+ A +A RA KG Sbjct: 175 NNNLQIDGAIDEVNSPYPIDKKFEAFNFHVINIDGHDFDAIDAAFKEA----RATKG 227 >gi|149279051|ref|ZP_01885185.1| alpha-ketoglutarate decarboxylase [Pedobacter sp. BAL39] gi|149230330|gb|EDM35715.1| alpha-ketoglutarate decarboxylase [Pedobacter sp. BAL39] Length = 931 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 20/177 (11%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT---NFS 236 ++ GD + A QG VYE +A L I++I NNQ T+ A + T + + Sbjct: 328 ILIHGDASIAGQGIVYEVIQMAGLDGYKTGGTIHLIINNQIGFTTNYKDARSSTYCTDIA 387 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 K +S P V+G D+ A+ ++ A+ Y + +K + I++L YR GH+ +D + Sbjct: 388 KVTLS---PVFHVNGDDVEALVYAINLAMEYRQKYKNDVFIDILCYRRFGHNEADEPKFT 444 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDL-----KEIEMNVRKIINNSVEFAQ 348 + + +P + ++L+ SEG L KE+E R I+ + A+ Sbjct: 445 QPLLYKTIEKHANPRDIYVQQLI-----SEGKLEASLAKEMEKEFRGILQERLNEAK 496 >gi|83647432|ref|YP_435867.1| 2-oxoglutarate dehydrogenase E1 component [Hahella chejuensis KCTC 2396] gi|83635475|gb|ABC31442.1| 2-oxoglutarate dehydrogenase, E1 component [Hahella chejuensis KCTC 2396] Length = 946 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 24/210 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR D + V+ GD A A QG V E+F ++ V +++I NNQ Sbjct: 340 GSVRARQDRRDDTAGDAVVPVIMHGDAAFAGQGVVMETFQMSQTRGYGVGGTVHIIINNQ 399 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 T + T + + P V+G D AV A+ Y K ++I+ Sbjct: 400 VGFTTHRREDARSTEYCTDVAKMVQAPIFHVNGDDPEAVLFVTQVAMDYRNTFKKDVVID 459 Query: 279 MLTYRYRGHSMSD------PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +L YR RGH+ +D P Y+ + + R + +RL++ +E + + Sbjct: 460 LLCYRRRGHNEADEPSATQPLMYQCIKSLPTTRQIY------AQRLINEGVITEEESARL 513 Query: 333 EMNVRKIINNSVEFAQS-DKEPDPAELYSD 361 E R +++ +S KEP+ EL+ D Sbjct: 514 ENEYRDLLDKGDHVVKSLVKEPN-KELFVD 542 >gi|328774065|gb|EGF84102.1| hypothetical protein BATDEDRAFT_34093 [Batrachochytrium dendrobatidis JAM81] Length = 1230 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 9/145 (6%) Query: 169 GIAF--ANKYRRSDKICVVCFGDGA-ANQGQVYESF---NIAALWNLNVIYVIENNQYAM 222 GI F ++ RS + V+ GD A A QG VYE+ ++ A I+++ NNQ Sbjct: 414 GIQFYQNDEVERSKAMAVLLHGDAAFAAQGVVYETLGMVDLPAYTTGGTIHIVVNNQVGF 473 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T A + S + N P + V+G D+ AV A + K ++++++ Y Sbjct: 474 TTDPRFARSTPYCSDVAKTVNAPIIHVNGDDVEAVVFACQLASEWRAEFKKDVVLDIVCY 533 Query: 283 RYRGHSMSDPANYRTR---EEINEM 304 R GH+ D + ++IN+M Sbjct: 534 RRYGHNEIDQPGFTQPLMYQKINQM 558 >gi|70606022|ref|YP_254892.1| transketolase [Sulfolobus acidocaldarius DSM 639] gi|68566670|gb|AAY79599.1| thiamine diphosphate-binding domain transketolase [Sulfolobus acidocaldarius DSM 639] Length = 271 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 16/164 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A K R V GDG ++GQV+E+ A L N+I IE Sbjct: 122 GSLGQGLSFGIGVAQGIKMRGGSGRVYVVMGDGEQDEGQVWEAMTHAVARKLDNLIAFIE 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + S + S + DG D ++ +T+D+A+ K P++ Sbjct: 182 INGFQLDDSTGSVKPKEFLPDVWRSVGWKVLNCDGHDFISLISTIDEAI----KAKAPVV 237 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 I T R +G + E + RS+ D RK LL+ Sbjct: 238 IFANTVRGKG--------FPVIENTKKQRSSPD---DARKYLLN 270 >gi|255533597|ref|YP_003093969.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pedobacter heparinus DSM 2366] gi|255346581|gb|ACU05907.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pedobacter heparinus DSM 2366] Length = 931 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 20/177 (11%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT---NFS 236 ++ GD + A QG VYE +A L I++I NNQ T+ A T + + Sbjct: 328 ILIHGDASVAGQGIVYEVIQMAGLDGYKTGGTIHLIINNQIGFTTNFKDARTSTYCTDIA 387 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 K +S P V+G D+ A+ ++ A+ Y + +K + I++L YR GH+ SD + Sbjct: 388 KVTLS---PVFHVNGDDVEALVYAINLAMEYRQKYKNDVFIDILCYRRFGHNESDEPKFT 444 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDL-----KEIEMNVRKIINNSVEFAQ 348 + + +P + ++L+ +EG L KE+E R I+ + A+ Sbjct: 445 QPLLYKAIEKHANPRDIYIQQLI-----TEGKLEASLAKEMEKEFRGILQERLNEAK 496 >gi|221314158|ref|ZP_03595963.1| alpha-ketoglutarate decarboxylase [Bacillus subtilis subsp. subtilis str. NCIB 3610] Length = 941 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 4/175 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A +G V E+ N+++L V I++I NN T + + + S Sbjct: 355 LAILIHGDAAFPGEGIVAETLNLSSLKGYQVGGAIHIIANNMIGFTTESAESRSTKYASD 414 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + IP + V+ D A + + AV Y + +I+++ YR GH+ D + Sbjct: 415 LAKGYEIPIVHVNADDPEACLSAVKFAVEYRKTFNKDFLIDLIGYRRYGHNEMDEPSTTQ 474 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 + +R + + K+L+ +E ++ IE +V K I ++++ S KE Sbjct: 475 PMLYDAVRKHPTSNKFSLKKLVKEGVVTEEVVQNIEKSVTKRIEDAIQKVPSKKE 529 >gi|148272502|ref|YP_001222063.1| alpha-ketoglutarate decarboxylase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830432|emb|CAN01367.1| 2-oxoglutarate dehydrogenase E1 component [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 1272 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 27/215 (12%) Query: 118 CGVDASKIMAELTGRQGGIS-KGKGGSMHMFSTKNGFYGGHG-----IVGAQVS------ 165 G +I E G Q + +G G + T+ F G HG + A S Sbjct: 602 AGKSYGQIFREFEGTQDPRTVQGSGDVKYHLGTEGTFRGVHGEEMPVYLAANPSHLEAVN 661 Query: 166 -LGTGIAFANKYRRS----DKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 + GI A + R+ + ++ GD + A QG V+E+ ++ L ++++ Sbjct: 662 GVLEGIVRAKQDRKPIGSFSVLPILVHGDASMAGQGVVFETLQLSQLRAYRTGGTVHIVI 721 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ T S + + + S P V+G D AV A + + K ++ Sbjct: 722 NNQVGFTTPPSESRSSVYSTDVAKSIQAPIFHVNGDDPEAVARVAHLAFEFRQEFKKDVV 781 Query: 277 IEMLTYRYRGH------SMSDPANYRTREEINEMR 305 I+++ YR RGH SM+ P Y E +R Sbjct: 782 IDLVCYRRRGHNEGDDPSMTQPLMYNLIEAKRSVR 816 >gi|66814432|ref|XP_641395.1| oxoglutarate dehydrogenase [Dictyostelium discoideum AX4] gi|74855873|sp|Q54VG0|DHTK1_DICDI RecName: Full=Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial; AltName: Full=Oxoglutarate dehydrogenase A; Flags: Precursor gi|60469409|gb|EAL67403.1| oxoglutarate dehydrogenase [Dictyostelium discoideum AX4] Length = 900 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 4/173 (2%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S+ +C++ GD A A QG V E+ ++ L N+ ++VI NNQ T + + Sbjct: 294 SESLCLMLHGDAAVAGQGVVTETLQLSQLSGFNIGGCVHVIVNNQIGFTTVPTNGRSNRY 353 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S G P + V+ V+ AV Y + K III+++ +R GH+ D + Sbjct: 354 SSDIGKFIGAPIIVVNSQSPEQVEKVSRLAVEYRQKFKKDIIIDLIGWRKFGHNEVDEPS 413 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + +R ++ +++ SE +L E + I+ + + Sbjct: 414 FTQPTMYQNIRKRQSIPQKYATQIISQGIFSEQELLEFTQKEQAILEEQFQLS 466 >gi|18677186|gb|AAL78225.1|AF345797_1 putative pyruvate dehydrogenase [Heterodera glycines] Length = 132 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 42/66 (63%) Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 TR+EI E+R + DPI + R++ +E +LK+I+ VR+ ++ +V+ A SD+ P Sbjct: 1 TRDEIQEVRKSRDPITSFKDRIVTAGLVTEEELKDIDKKVRQEVDEAVKVALSDEVLPPE 60 Query: 357 ELYSDI 362 L+SD+ Sbjct: 61 TLFSDL 66 >gi|121637177|ref|YP_977400.1| alpha-ketoglutarate decarboxylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|215445426|ref|ZP_03432178.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis T85] gi|224989652|ref|YP_002644339.1| alpha-ketoglutarate decarboxylase [Mycobacterium bovis BCG str. Tokyo 172] gi|289446839|ref|ZP_06436583.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis CPHL_A] gi|289757346|ref|ZP_06516724.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis T85] gi|31618030|emb|CAD94141.1| PROBABLE 2-OXOGLUTARATE DEHYDROGENASE SUCA (Alpha-ketoglutarate dehydrogenase) [Mycobacterium bovis AF2122/97] gi|121492824|emb|CAL71295.1| alpha-ketoglutarate decarboxylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772765|dbj|BAH25571.1| alpha-ketoglutarate decarboxylase [Mycobacterium bovis BCG str. Tokyo 172] gi|289419797|gb|EFD16998.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis CPHL_A] gi|289712910|gb|EFD76922.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis T85] gi|326902871|gb|EGE49804.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis W-148] Length = 1214 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 625 VPLMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSSEYCTD 684 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 685 VAKMIGAPIFHVNGDDPEACVWVARLAVDFRQRFKKDVVIDMLCYRRRGHNEGDDPSMTN 744 Query: 292 PANY 295 P Y Sbjct: 745 PYMY 748 >gi|66806367|ref|XP_636906.1| 2-oxoglutarate dehydrogenase, E1 subunit [Dictyostelium discoideum AX4] gi|74852748|sp|Q54JE4|ODO1_DICDI RecName: Full=2-oxoglutarate dehydrogenase, mitochondrial; AltName: Full=2-oxoglutarate dehydrogenase complex component E1; Short=OGDC-E1; AltName: Full=Alpha-ketoglutarate dehydrogenase; Flags: Precursor gi|60465316|gb|EAL63408.1| 2-oxoglutarate dehydrogenase, E1 subunit [Dictyostelium discoideum AX4] Length = 1013 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/183 (20%), Positives = 83/183 (45%), Gaps = 8/183 (4%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++ + + V GD + A QG VYE+ +++ L N + ++++ NNQ T+ Sbjct: 386 YSKDTEQKKSMAVQLHGDASVAGQGVVYETLHLSNLDNYSTGGTVHIVVNNQIGFTTNPK 445 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + +IP V+G ++ AV A + + K + ++++ YR GH Sbjct: 446 YSRSSKYCTDVAKTIDIPVFHVNGDNVEAVVKVCKIAAEWRQKFKRDVFVDIVCYRKHGH 505 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + +D + +++ IE+ +L+ K ++ E + ++ II+ S E Sbjct: 506 NETDQPKFTQPIMYDKIGKQQPIIEKYSNKLIAEKVITQ----EQYLQMKNIIHESYEKG 561 Query: 348 QSD 350 D Sbjct: 562 YQD 564 >gi|289573908|ref|ZP_06454135.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis K85] gi|289538339|gb|EFD42917.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis K85] Length = 1214 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 625 VPLMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSSEYCTD 684 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 685 VAKMIGAPIFHVNGDDPEACVWVARLAVDFRQRFKKDVVIDMLCYRRRGHNEGDDPSMTN 744 Query: 292 PANY 295 P Y Sbjct: 745 PYMY 748 >gi|170747355|ref|YP_001753615.1| 2-oxoglutarate dehydrogenase E1 component [Methylobacterium radiotolerans JCM 2831] gi|170653877|gb|ACB22932.1| 2-oxoglutarate dehydrogenase, E1 subunit [Methylobacterium radiotolerans JCM 2831] Length = 995 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 4/178 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L ++ I NNQ T + + Sbjct: 392 RRTVLPLLIHGDAAFAGQGVVAECFGLSGLKGHRTGGSVHFIINNQIGFTTDPRFSRSSP 451 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P +G D AV AV Y + P++I+ML YR GH+ D Sbjct: 452 YPSDVAKMVEAPIFHCNGDDPEAVTFAAKVAVEYRQKFGKPVVIDMLCYRRFGHNEGDEP 511 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + + +R + +E ++L+ N ++ L + R ++++ ++ A + K Sbjct: 512 AFTQPKMYQRIRKHPSVLENYGRKLVENGSVTQEALDARKAEFRGMLDSELDVANNYK 569 >gi|193215789|ref|YP_001996988.1| transketolase domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193089266|gb|ACF14541.1| Transketolase domain protein [Chloroherpeton thalassium ATCC 35110] Length = 285 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 1/102 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ GIA K +++ V GDG N+G V+ES +AA L N++ +++ Sbjct: 116 GSLGHLLSVSIGIAMDIKLKKASNKVYVILGDGELNEGSVWESCQVAAAKKLDNLVAIVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 N++ S K+ +F +V G D +A++ Sbjct: 176 RNEFQANIRTEELSPLEPIEKKFEAFGWTTKRVAGHDFQALE 217 >gi|160934742|ref|ZP_02082128.1| hypothetical protein CLOLEP_03617 [Clostridium leptum DSM 753] gi|156866195|gb|EDO59567.1| hypothetical protein CLOLEP_03617 [Clostridium leptum DSM 753] Length = 280 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G VS+ G+A KY + GDG +GQ++E+ AA + L N+ +++ Sbjct: 118 GSLGQGVSVAAGMALGAKYENKNLRVYTATGDGEIQEGQIWEALMFAAHYKLDNLCVIVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + VS+ + ++ +F + +DG ++A +KA Sbjct: 178 NNNLQIDGEVSKVMSPYPIDEKLKAFGFEVICIDGHSFDEIEAAFEKA 225 >gi|253580406|ref|ZP_04857671.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848136|gb|EES76101.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 279 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 7/135 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K GDG +GQV+E+ A L N++ +++ Sbjct: 115 GSLGQGISAAVGMALSAKLSNESYRVYTLLGDGEIQEGQVWEAAMFAGFRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + V + K+ +FN + V DG D+ ++A D+A +A KG P Sbjct: 175 NNGLQIDGKVDEVCSPYPIDKKFEAFNFHVINVADGNDMDQLRAAFDEA----KATKGMP 230 Query: 275 IIIEMLTYRYRGHSM 289 I M T + +G S Sbjct: 231 TAIIMKTVKGKGVSF 245 >gi|325521739|gb|EGD00490.1| putative transketolase [Burkholderia sp. TJI49] Length = 281 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 7/131 (5%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + +D F DG ++G ++E AA Sbjct: 109 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRKNADAFVYTLFSDGELDEGAIWEGLMSAA 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 W L N+I +++ NNQ A G S ++ A + +F +V+G DI AVK D Sbjct: 169 HWKLDNLIAMVDVNNQQADGPS-TQIMAFEPLVDKLEAFGWYAQRVNGNDIEAVKQAFDN 227 Query: 264 AVAYCRAHKGP 274 A R H P Sbjct: 228 A----RNHDKP 234 >gi|325969900|ref|YP_004246091.1| transketolase [Spirochaeta sp. Buddy] gi|324025138|gb|ADY11897.1| Transketolase [Spirochaeta sp. Buddy] Length = 272 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 10/139 (7%) Query: 145 HMFSTKN-GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 H ++ K G G +G VS+G G+A A + RR D GDG +G ++E+ Sbjct: 101 HPYAPKTKGLDATTGSLGNGVSIGLGMALAARIRRKDYQVYAITGDGELGEGMIWEAAMA 160 Query: 204 AALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD----IRAVK 258 A+ + N+ I+NN Y G +V S + +F +DG D +RAV+ Sbjct: 161 ASHHKVGNLTVFIDNNNYQSGGTVGEVSGPYPIEDKWQAFGWHVQTIDGHDMDQILRAVE 220 Query: 259 ---ATMDKAVA-YCRAHKG 273 DK A C+ KG Sbjct: 221 IAHLVTDKPSAIVCKTVKG 239 >gi|309792472|ref|ZP_07686936.1| alpha-ketoglutarate decarboxylase [Oscillochloris trichoides DG6] gi|308225460|gb|EFO79224.1| alpha-ketoglutarate decarboxylase [Oscillochloris trichoides DG6] Length = 932 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 5/147 (3%) Query: 180 DKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF 235 + + ++ GD A QG V E+ N++ L ++ I+VI NNQ T + + Sbjct: 337 ESLAILVHGDAAFPGQGIVAETLNLSRLKGYHIGGAIHVILNNQIGFTTDYHDSRSTHYA 396 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 S F IP + V+ + A A A AY + +I+++ YR GH+ D + Sbjct: 397 SDLARGFEIPIVHVNADEPEACIAAARMAWAYREKFQKDFLIDLVGYRRWGHNEGDEPEF 456 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNK 322 T+ + E NH + ++ R L + Sbjct: 457 -TQPRMYEKIRNHPTVREIWARELERR 482 >gi|115679076|ref|XP_789717.2| PREDICTED: similar to MGC137985 protein, partial [Strongylocentrotus purpuratus] Length = 717 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 13/195 (6%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A +Y R D + ++ GD A A QG VYE+F+++ L + I+V+ NNQ Sbjct: 321 GKTRAEQYYRGDTEGDQVMSILMHGDAAFAGQGIVYETFHLSDLPEYSTHGTIHVVINNQ 380 Query: 220 YAMGTS--VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 T SR+S R V N P V+ D AV A + +K ++I Sbjct: 381 IGFTTDPRFSRSSPYCTDVARVV--NAPIFHVNADDPEAVNHVCQVASKWRCRYKSDVVI 438 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 +++ YR GH+ D + ++R + ++Q ++ + +E + +E + Sbjct: 439 DLVCYRRNGHNEMDEPLFTQPLMYKKIRGHRPVLKQYAEQKIQEGIMTEQEFEEEQDGYD 498 Query: 338 KIINNSVEFAQSDKE 352 KI ++ + A+ E Sbjct: 499 KICEDAYQNAKKVTE 513 >gi|90416065|ref|ZP_01223998.1| 2-oxoglutarate dehydrogenase (E1 subunit) [marine gamma proteobacterium HTCC2207] gi|90332439|gb|EAS47636.1| 2-oxoglutarate dehydrogenase (E1 subunit) [marine gamma proteobacterium HTCC2207] Length = 945 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 15/161 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG +HM GF H + V +G+G A + RR DK + ++ GD A A Q Sbjct: 316 GGEVHM---ALGFNPSHLEISCPVVIGSGRARQD--RRDDKTGEKVVPILMHGDAAFAGQ 370 Query: 195 GQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVD 250 G V E+F ++ A I+++ NNQ TS + T + + P + V+ Sbjct: 371 GVVMETFQLSQTRAYKTGGSIHIVINNQVGFTTSRQEDARSTEYCTDIAKMVQAPILHVN 430 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 G + AV A Y ++I+++ YR RGH+ +D Sbjct: 431 GDNPDAVMFAAMLATDYRYEFGKDVVIDLVCYRRRGHNETD 471 >gi|330829375|ref|YP_004392327.1| Oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Aeromonas veronii B565] gi|328804511|gb|AEB49710.1| Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component [Aeromonas veronii B565] Length = 935 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 69/273 (25%), Positives = 113/273 (41%), Gaps = 37/273 (13%) Query: 115 ILACGVDASKIMAELTGRQGGISKGKGG-SMHM-----FSTKNG-------FYGGHGIVG 161 I G A + E G+ G S G G HM F+T G F H + Sbjct: 271 INVLGKRAQDLFDEFAGKHGE-SWGTGDVKYHMGFSSDFATPGGNVHLALAFNPSHLEIV 329 Query: 162 AQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---I 212 V +G+ A + RR DK + + GD A A QG V E+FN++ V + Sbjct: 330 NPVVIGSVRARMD--RRGDKDGSSVLPITIHGDSAMAGQGVVAETFNMSQTRAYGVGGTV 387 Query: 213 YVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 ++ NNQ TS R T + + + P + V+G D AV A+ Y Sbjct: 388 RIVINNQVGFTTSYIRDLRSTEYCTDIAKAVQAPVLHVNGDDPEAVVLVTQIALDYRNTF 447 Query: 272 KGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 K ++IE++ YR GH+ +D + +++ + P +++ ++ +EG L Sbjct: 448 KRDVVIELVCYRRHGHNEADEPSATQPLMYQKIKQHPTP-----RKIYADQLVAEGSLA- 501 Query: 332 IEMNVRKIINNSVEF----AQSDKEPDPAELYS 360 + +++N E + KE P EL+S Sbjct: 502 -QERATELVNEYREALDRGERVSKEWRPMELHS 533 >gi|292491668|ref|YP_003527107.1| transaldolase [Nitrosococcus halophilus Nc4] gi|291580263|gb|ADE14720.1| transaldolase [Nitrosococcus halophilus Nc4] Length = 981 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G ++ GIA AN+ D GDG ++G V+E+ A+L L N++ +++ Sbjct: 489 GSLGQGLAAANGIALANRLDDIDARVYCLLGDGECSEGSVWEAAQFASLNKLSNLVAIVD 548 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N A F+ R SF +++DG D+ A+ ++A GP Sbjct: 549 VNALAQSGPAPYQHDTQVFAHRFQSFGWEAIEIDGHDLTAILNAFEQA-----KKAGPTA 603 Query: 277 IEMLTYRYRGHSM 289 I T + +G S Sbjct: 604 IIAKTEKGKGVSF 616 >gi|296120890|ref|YP_003628668.1| 2-oxoglutarate dehydrogenase, E1 subunit [Planctomyces limnophilus DSM 3776] gi|296013230|gb|ADG66469.1| 2-oxoglutarate dehydrogenase, E1 subunit [Planctomyces limnophilus DSM 3776] Length = 928 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 71/290 (24%), Positives = 114/290 (39%), Gaps = 55/290 (18%) Query: 60 LLIRRFE-EKAGQLYGMGMVGGFCHLCI------GQEAVIVGMKMSLTEGDQMITAYREH 112 ++R+F+ K+ L G + L I G E +I+GM A+R Sbjct: 205 FILRKFQGAKSFSLEGGETLIPLLELAINKSASQGVEEIILGM------------AHRGR 252 Query: 113 GHILAC--GVDASKIMAELTGRQGGISKGKG------GSMHMFSTKNG--------FYGG 156 ++LA G A I E + G+G G + ++T +G F Sbjct: 253 LNVLASIMGKPARAIFREFADLDPQLHLGRGDVKYHLGYSNDYTTADGKKVHLSLCFNPS 312 Query: 157 HGIVGAQVSLGTGIAFANKYRRSD-----KICVVCFGDGA-ANQGQVYESFNIAALWNLN 210 H V+LG A + RR D + ++ GD A A +G E N++ L + Sbjct: 313 HLEFVNTVALGR--VRAKQDRRQDVERRKSMALLIHGDAAFAGEGITQEMLNLSELESTR 370 Query: 211 V---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 ++VI NNQ T + + + IP V+G D AV ++ A+ + Sbjct: 371 TGGTVHVIVNNQIGFTTPPHQGRSTAYATDVAKMLQIPIFHVNGEDPEAVAQVVELAMDF 430 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSD------PANYRTREEINEMR---SNH 308 + ++I+M YR RGH+ D P Y+ + MR SNH Sbjct: 431 RCEFQRDVVIDMYCYRLRGHNEQDEPRFTNPGMYKAIDRRQPMRVTYSNH 480 >gi|190893735|ref|YP_001980277.1| oxoglutarate dehydrogenase E1 protein [Rhizobium etli CIAT 652] gi|190699014|gb|ACE93099.1| oxoglutarate dehydrogenase E1 protein [Rhizobium etli CIAT 652] Length = 994 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG + E ++ L V ++VI NNQ T+ + + + Sbjct: 391 RSKVLPLLIHGDAAFAGQGVIAEILGLSGLRGHRVAGTMHVIINNQIGFTTNPAFSRSSP 450 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P + V+G D AV A + P++++M YR GH+ D Sbjct: 451 YPSDVAKMIEAPILHVNGDDPEAVVYAAKVATEFRMKFHKPVVLDMFCYRRYGHNEGDEP 510 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ + +R + ++ +RL+ ++G++++++ + R + + Q K P Sbjct: 511 SFTQPKMYKVIRGHKTVLQLYAERLVREGLVTDGEVEKMKADWRAHLEQEFDAGQHYK-P 569 Query: 354 DPAE 357 + A+ Sbjct: 570 NKAD 573 >gi|170782429|ref|YP_001710762.1| alpha-ketoglutarate decarboxylase [Clavibacter michiganensis subsp. sepedonicus] gi|169156998|emb|CAQ02168.1| putative dehydrogenase complex protein [Clavibacter michiganensis subsp. sepedonicus] Length = 1268 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 27/215 (12%) Query: 118 CGVDASKIMAELTGRQGGIS-KGKGGSMHMFSTKNGFYGGHG-----IVGAQVS------ 165 G +I E G Q + +G G + T+ F G HG + A S Sbjct: 598 AGKSYGQIFREFEGTQDPRTVQGSGDVKYHLGTEGTFRGVHGEEMPVYLAANPSHLEAVN 657 Query: 166 -LGTGIAFANKYRRS----DKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 + GI A + R+ + ++ GD + A QG V+E+ ++ L ++++ Sbjct: 658 GVLEGIVRAKQDRKPIGSFSVLPILVHGDASMAGQGVVFETLQLSQLRAYRTGGTVHIVI 717 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ T S + + + S P V+G D AV A + + K ++ Sbjct: 718 NNQVGFTTPPSESRSSVYSTDVAKSIQAPIFHVNGDDPEAVARVAHLAFEFRQEFKKDVV 777 Query: 277 IEMLTYRYRGH------SMSDPANYRTREEINEMR 305 I+++ YR RGH SM+ P Y E +R Sbjct: 778 IDLVCYRRRGHNEGDDPSMTQPLMYNLIEAKRSVR 812 >gi|115647024|ref|XP_792602.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115940260|ref|XP_001195164.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 761 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 13/195 (6%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A +Y R D + ++ GD A A QG VYE+F+++ L + I+V+ NNQ Sbjct: 141 GKTRAEQYYRGDTEGDQVMSILMHGDAAFAGQGIVYETFHLSDLPEYSTHGTIHVVINNQ 200 Query: 220 YAMGTS--VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 T SR+S R V N P V+ D AV A + +K ++I Sbjct: 201 IGFTTDPRFSRSSPYCTDVARVV--NAPIFHVNADDPEAVNHVCQVASKWRCRYKSDVVI 258 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 +++ YR GH+ D + ++R + ++Q ++ + +E + +E + Sbjct: 259 DLVCYRRNGHNEMDEPLFTQPLMYKKIRGHRPVLKQYAEQKIQEGIMTEQEFEEEQDGYD 318 Query: 338 KIINNSVEFAQSDKE 352 KI ++ + A+ E Sbjct: 319 KICEDAYQNAKKVTE 333 >gi|221230016|ref|YP_002503432.1| alpha-ketoglutarate decarboxylase [Mycobacterium leprae Br4923] gi|13093089|emb|CAC31476.1| 2-oxoglutarate dehydrogenase, E1 and E2 components [Mycobacterium leprae] gi|219933123|emb|CAR71190.1| 2-oxoglutarate dehydrogenase, E1 and E2 components [Mycobacterium leprae Br4923] Length = 1260 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 10/148 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IY 213 G+V A+ L N+ + ++ GD A A QG V E+ N+A L V I+ Sbjct: 648 GLVRAKQDLLNKDTNGNQDEAFSVVPMMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIH 707 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 +I NNQ T+ + + + P V+G D A AV + + K Sbjct: 708 IIVNNQIGFTTAPEYSRSSEYCTDVAKMIGAPIFHVNGDDPEACVWVAKLAVDFRQRFKK 767 Query: 274 PIIIEMLTYRYRGH------SMSDPANY 295 ++I+ML YR RGH SM++P Y Sbjct: 768 DVVIDMLCYRRRGHNEGDDPSMTNPYMY 795 >gi|289442683|ref|ZP_06432427.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis T46] gi|289569253|ref|ZP_06449480.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis T17] gi|289749791|ref|ZP_06509169.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis T92] gi|289753319|ref|ZP_06512697.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis EAS054] gi|289415602|gb|EFD12842.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis T46] gi|289543007|gb|EFD46655.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis T17] gi|289690378|gb|EFD57807.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis T92] gi|289693906|gb|EFD61335.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis EAS054] Length = 1214 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 625 VPLMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSSEYCTD 684 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 685 VAKMIGAPIFHVNGDDPEACVWVARLAVDFRQRFKKDVVIDMLCYRRRGHNEGDDPSMTN 744 Query: 292 PANY 295 P Y Sbjct: 745 PYMY 748 >gi|227495004|ref|ZP_03925320.1| 2-oxoglutarate decarboxylase [Actinomyces coleocanis DSM 15436] gi|226831456|gb|EEH63839.1| 2-oxoglutarate decarboxylase [Actinomyces coleocanis DSM 15436] Length = 1213 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 83/217 (38%), Gaps = 29/217 (13%) Query: 108 AYREHGHILA--CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 A+R ++LA G ++I +E G S G + G Y +VS Sbjct: 534 AHRGRLNVLANIAGKSYAQIFSEFEGNYDPRSVQGSGDVKYHLGTEGIYSASDGYATKVS 593 Query: 166 LGT-------------GIAFANKYRRSDK----ICVVCFGDGA-ANQGQVYESFNIAAL- 206 L GI A + S+ + ++ GD A QG VYE+ N++ L Sbjct: 594 LAANPSHLEAVNGVLQGIVRAKHDKLSEPGYPVLPILIHGDAAFIGQGVVYETLNMSQLK 653 Query: 207 --WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N +VI NNQ TS + + + IP V+ D V T A Sbjct: 654 AYRNGGTFHVIVNNQIGFTTSPTSGRSTRYCTDLAKGLQIPIFHVNADDPEMVVRTAKVA 713 Query: 265 VAYCRAHKGPIIIEMLTYRYRGH------SMSDPANY 295 + + +II+++ YR RGH SM+ P Y Sbjct: 714 FEFRKEFNKDVIIDLICYRRRGHNEGDDPSMTQPVMY 750 >gi|225628123|ref|ZP_03786158.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella ceti str. Cudo] gi|256158424|ref|ZP_05456322.1| 2-oxoglutarate dehydrogenase E1 component [Brucella ceti M490/95/1] gi|256253844|ref|ZP_05459380.1| 2-oxoglutarate dehydrogenase E1 component [Brucella ceti B1/94] gi|260169350|ref|ZP_05756161.1| 2-oxoglutarate dehydrogenase E1 component [Brucella sp. F5/99] gi|261220980|ref|ZP_05935261.1| 2-oxoglutarate dehydrogenase E1 component [Brucella ceti B1/94] gi|261758866|ref|ZP_06002575.1| 2-oxoglutarate dehydrogenase E1 component [Brucella sp. F5/99] gi|265996939|ref|ZP_06109496.1| 2-oxoglutarate dehydrogenase E1 component [Brucella ceti M490/95/1] gi|225616948|gb|EEH13995.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella ceti str. Cudo] gi|260919564|gb|EEX86217.1| 2-oxoglutarate dehydrogenase E1 component [Brucella ceti B1/94] gi|261738850|gb|EEY26846.1| 2-oxoglutarate dehydrogenase E1 component [Brucella sp. F5/99] gi|262551407|gb|EEZ07397.1| 2-oxoglutarate dehydrogenase E1 component [Brucella ceti M490/95/1] Length = 1004 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 402 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P + V+G D AV A + P++I+M YR GH+ D Sbjct: 462 YPSDVAKMIEAPILHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 521 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ ++L+ ++ D+ ++ + R+ + E QS K P Sbjct: 522 SFTQPLMYKAIRAHKTTVQLYGEKLIAEGLVTQDDIDRMKADWRQKLEGEFEAGQSYK-P 580 Query: 354 DPAE 357 + A+ Sbjct: 581 NKAD 584 >gi|161723268|ref|NP_301802.2| alpha-ketoglutarate decarboxylase [Mycobacterium leprae TN] gi|160395563|sp|Q9CC97|KGD_MYCLE RecName: Full=2-oxoglutarate decarboxylase; AltName: Full=2-oxoglutarate carboxy-lyase; AltName: Full=Alpha-ketoglutarate decarboxylase Length = 1238 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 10/148 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IY 213 G+V A+ L N+ + ++ GD A A QG V E+ N+A L V I+ Sbjct: 626 GLVRAKQDLLNKDTNGNQDEAFSVVPMMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIH 685 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 +I NNQ T+ + + + P V+G D A AV + + K Sbjct: 686 IIVNNQIGFTTAPEYSRSSEYCTDVAKMIGAPIFHVNGDDPEACVWVAKLAVDFRQRFKK 745 Query: 274 PIIIEMLTYRYRGH------SMSDPANY 295 ++I+ML YR RGH SM++P Y Sbjct: 746 DVVIDMLCYRRRGHNEGDDPSMTNPYMY 773 >gi|237744020|ref|ZP_04574501.1| transketolase subunit A [Fusobacterium sp. 7_1] gi|229431249|gb|EEO41461.1| transketolase subunit A [Fusobacterium sp. 7_1] Length = 270 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + V GDG +GQ++E+ AA + L N+ ++ Sbjct: 116 GSLGQGLSVANGMALNAKMFNENYRTYVILGDGEVQEGQIWEAAMTAAHYKLNNLCAFLD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + +VS K+ +F +++DG D + + +DKA R KG P Sbjct: 176 NNNLQIDGNVSEIMGVEPLDKKWEAFGWNVIKIDGHDFEQILSALDKA----RECKGKPT 231 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 232 MIIAKTIKGKGVSF 245 >gi|260204502|ref|ZP_05771993.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis K85] Length = 1231 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 642 VPLMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSSEYCTD 701 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 702 VAKMIGAPIFHVNGDDPEACVWVARLAVDFRQRFKKDVVIDMLCYRRRGHNEGDDPSMTN 761 Query: 292 PANY 295 P Y Sbjct: 762 PYMY 765 >gi|215403087|ref|ZP_03415268.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis 02_1987] gi|215410884|ref|ZP_03419692.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis 94_M4241A] gi|260186182|ref|ZP_05763656.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis CPHL_A] gi|289744993|ref|ZP_06504371.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis 02_1987] gi|298524750|ref|ZP_07012159.1| 2-oxoglutarate dehydrogenase E1 component [Mycobacterium tuberculosis 94_M4241A] gi|289685521|gb|EFD53009.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis 02_1987] gi|298494544|gb|EFI29838.1| 2-oxoglutarate dehydrogenase E1 component [Mycobacterium tuberculosis 94_M4241A] Length = 1231 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 642 VPLMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSSEYCTD 701 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 702 VAKMIGAPIFHVNGDDPEACVWVARLAVDFRQRFKKDVVIDMLCYRRRGHNEGDDPSMTN 761 Query: 292 PANY 295 P Y Sbjct: 762 PYMY 765 >gi|49474814|ref|YP_032856.1| alpha-ketoglutarate decarboxylase [Bartonella quintana str. Toulouse] gi|49240318|emb|CAF26800.1| Alpha-ketoglutarate dehydrogenase [Bartonella quintana str. Toulouse] Length = 999 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 12/174 (6%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG + E+F ++ L V I+VI NNQ T + + Sbjct: 396 RAKVLPLLIHGDAAFAGQGVIQETFGLSGLKGYRVAGSIHVIVNNQIGFTTDPRFSRSSP 455 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV A + + P++I+M YR GH+ D Sbjct: 456 YPSDVAKMIDAPIFHVNGDDPEAVVFIAKIATEFRQIFHKPVVIDMFCYRRYGHNEGDEP 515 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG--DLKEIEMNVRKIINNSVE 345 ++ T+ + + NH Q L ++ EG L+EIE +K+ + +E Sbjct: 516 SF-TQPLMYKAIRNHKTTLQ----LYGDQLVKEGVISLEEIEQQ-KKLWRDKLE 563 >gi|332975527|gb|EGK12417.1| 2-oxoglutarate dehydrogenase E1 component [Desmospora sp. 8437] Length = 957 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 5/125 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + ++ GD A +G V E+ N++ L N I++I NNQ T + + T Sbjct: 355 SKALAILIHGDAAFPGEGIVAETLNLSRLRGYNTGGTIHIIANNQLGFTTKSMDSRSTTY 414 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F IP + V+ D A A + A Y +I+++ YR GH+ M DP Sbjct: 415 ASDLAKGFEIPVVHVNADDPEACLAAVRLAFEYRSKFGKDFLIDLIGYRRFGHNEMDDPV 474 Query: 294 NYRTR 298 + R Sbjct: 475 ATQPR 479 >gi|215426560|ref|ZP_03424479.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis T92] gi|215430129|ref|ZP_03428048.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis EAS054] gi|219557142|ref|ZP_03536218.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis T17] gi|260200297|ref|ZP_05767788.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis T46] Length = 1231 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 642 VPLMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSSEYCTD 701 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 702 VAKMIGAPIFHVNGDDPEACVWVARLAVDFRQRFKKDVVIDMLCYRRRGHNEGDDPSMTN 761 Query: 292 PANY 295 P Y Sbjct: 762 PYMY 765 >gi|145299313|ref|YP_001142154.1| 2-oxoglutarate dehydrogenase E1 component [Aeromonas salmonicida subsp. salmonicida A449] gi|142852085|gb|ABO90406.1| 2-oxoglutarate dehydrogenase, E1 component [Aeromonas salmonicida subsp. salmonicida A449] Length = 936 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 84/200 (42%), Gaps = 26/200 (13%) Query: 115 ILACGVDASKIMAELTGRQGGISKGKGG-SMHM-----FSTKNG-------FYGGHGIVG 161 I G A ++ E G+ G S G G HM F+T G F H + Sbjct: 271 INVLGKRAQELFDEFAGKHGE-SWGTGDVKYHMGFSSDFATPGGNVHLALAFNPSHLEIV 329 Query: 162 AQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---I 212 V +G+ A RR DK + + GD A A QG V E+FN++ V + Sbjct: 330 NPVVIGS--VRARMDRRGDKDGSSVLPITIHGDSAIAGQGVVAETFNMSQTRAYGVGGTV 387 Query: 213 YVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 ++ NNQ TS R T + + + P + V+G D AV A+ Y Sbjct: 388 RIVINNQVGFTTSNMRDVRSTEYCTDIAKAVQAPVLHVNGDDPEAVVLVTQIALDYRNTF 447 Query: 272 KGPIIIEMLTYRYRGHSMSD 291 K ++IE++ YR GH+ +D Sbjct: 448 KRDVVIELVCYRRHGHNEAD 467 >gi|260494394|ref|ZP_05814525.1| transketolase [Fusobacterium sp. 3_1_33] gi|260198540|gb|EEW96056.1| transketolase [Fusobacterium sp. 3_1_33] Length = 270 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + V GDG +GQ++E+ AA + L N+ ++ Sbjct: 116 GSLGQGLSVANGMALNAKMFNENYRTYVILGDGEIQEGQIWEAAMTAAHYKLDNLCTFLD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + +VS K+ +F +++DG D + + +DKA R KG P Sbjct: 176 NNNLQIDGNVSEIMGVEPLDKKWEAFGWNVIKIDGHDFEQILSALDKA----RECKGKPT 231 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 232 MIIAKTIKGKGVSF 245 >gi|117923925|ref|YP_864542.1| transketolase subunit A [Magnetococcus sp. MC-1] gi|117607681|gb|ABK43136.1| transketolase subunit A [Magnetococcus sp. MC-1] Length = 268 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 103/226 (45%), Gaps = 21/226 (9%) Query: 96 KMSLTEGDQMITAYREHGHILA-CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 ++ +++G +++ Y ILA CG + + ++ +Q + + T NG Sbjct: 59 RLIMSKGHGLVSLYP----ILADCGYFPMEELPKIATQQSYLGVIPDAGIPGVETTNGAL 114 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSD-KICVVCFGDGAANQGQVYESFNIAALWNL-NVI 212 G HG+ +G G+A A K + S ++CVVC GDG N+G V+E+ A L N++ Sbjct: 115 G-HGL-----GVGAGMAIALKAQGSQARVCVVC-GDGEMNEGSVWEAIMFAPKHGLNNLM 167 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 VI++N+ +M + F + +F ++DG D+ V+ M + + + Sbjct: 168 LVIDDNKISMLGFQREILNLSPFVDKLSAFGWDCHRLDGHDMAQVQTRMQQ--LWLNPGQ 225 Query: 273 GPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 P + + T + +G A R + + +HD +E + L Sbjct: 226 RPCAVVLDTVKGKG-----VAALENRALSHVLSLSHDQVETAIQEL 266 >gi|308173900|ref|YP_003920605.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus amyloliquefaciens DSM 7] gi|307606764|emb|CBI43135.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus amyloliquefaciens DSM 7] Length = 944 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 16/181 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A +G V E+ N+++L V I++I NN T + + S Sbjct: 356 LAILIHGDAAFPGEGIVAETLNLSSLKGYQVGGAIHIIANNMIGFTTESDESRSTKYASD 415 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 + IP + V+ D A + + AV Y + +I+++ YR GH+ M +P+ Sbjct: 416 LAKGYEIPIVHVNADDPEACLSAVKFAVEYRKRFNKDFLIDLIGYRRYGHNEMDEPST-- 473 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE-----IEMNVRKIINNSVEFAQSDK 351 T+ + + H + KR+ K SEG + E IE V K I ++ + + K Sbjct: 474 TQPMLYDAVRKHPTV----KRIFAEKLVSEGLISEEKAQNIEATVTKRIEDAYKKVPAKK 529 Query: 352 E 352 E Sbjct: 530 E 530 >gi|301167477|emb|CBW27060.1| 2-oxoglutarate dehydrogenase E1 component [Bacteriovorax marinus SJ] Length = 910 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 4/165 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+ + NNQ T S A + + Sbjct: 330 VPIIIHGDAAVAGQGIVYETLQMSELPAYRSGGSIHFVINNQIGFTTDFSDARSSNYSTS 389 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + NIP + V+G V + A+ + + K I I+M+ YR GH+ D Y Sbjct: 390 VAKTLNIPIIHVNGDYPEHVVYACELAMEFRQKFKKDIFIDMVCYRKHGHNEGDEPKYTQ 449 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 + +P E RL+ + ++ KE++ + ++++ Sbjct: 450 PHLYGLISKVKNPRELYLDRLITSGSINKSLAKEMQDEFKALLSD 494 >gi|161511534|ref|NP_854934.2| alpha-ketoglutarate decarboxylase [Mycobacterium bovis AF2122/97] gi|160395561|sp|Q7U0A6|KGD_MYCBO RecName: Full=2-oxoglutarate decarboxylase; AltName: Full=2-oxoglutarate carboxy-lyase; AltName: Full=Alpha-ketoglutarate decarboxylase gi|160395562|sp|A1KI36|KGD_MYCBP RecName: Full=2-oxoglutarate decarboxylase; AltName: Full=2-oxoglutarate carboxy-lyase; AltName: Full=Alpha-ketoglutarate decarboxylase Length = 1231 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 642 VPLMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSSEYCTD 701 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 702 VAKMIGAPIFHVNGDDPEACVWVARLAVDFRQRFKKDVVIDMLCYRRRGHNEGDDPSMTN 761 Query: 292 PANY 295 P Y Sbjct: 762 PYMY 765 >gi|328553176|gb|AEB23668.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus amyloliquefaciens TA208] gi|328912050|gb|AEB63646.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus amyloliquefaciens LL3] Length = 944 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 16/181 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A +G V E+ N+++L V I++I NN T + + S Sbjct: 356 LAILIHGDAAFPGEGIVAETLNLSSLKGYQVGGAIHIIANNMIGFTTESDESRSTKYASD 415 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 + IP + V+ D A + + AV Y + +I+++ YR GH+ M +P+ Sbjct: 416 LAKGYEIPIVHVNADDPEACLSAVKFAVEYRKRFNKDFLIDLIGYRRYGHNEMDEPST-- 473 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE-----IEMNVRKIINNSVEFAQSDK 351 T+ + + H + KR+ K SEG + E IE V K I ++ + + K Sbjct: 474 TQPMLYDAVRKHPTV----KRIFAEKLVSEGLISEEKAQNIEATVTKRIEDAYKKVPAKK 529 Query: 352 E 352 E Sbjct: 530 E 530 >gi|289761396|ref|ZP_06520774.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis GM 1503] gi|289708902|gb|EFD72918.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis GM 1503] Length = 891 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 302 VPLMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSSEYCTD 361 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 362 VAKMIGAPIFHVNGDDPEACVWVARLAVDFRQRFKKDVVIDMLCYRRRGHNEGDDPSMTN 421 Query: 292 PANY 295 P Y Sbjct: 422 PYVY 425 >gi|7248873|gb|AAF43700.1|AF235020_1 2-oxoglutarate dehydrogenase [Brucella melitensis] Length = 712 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 110 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 169 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 170 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 229 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ ++L+ ++ D+ ++ + R+ + E QS K P Sbjct: 230 SFTQPLMYKAIRAHKTTVQLYGEKLIAEGLVTQDDIDRMKADWRQKLEGEFEAGQSYK-P 288 Query: 354 DPAE 357 + A+ Sbjct: 289 NKAD 292 >gi|160395557|sp|A1TDK2|KGD_MYCVP RecName: Full=2-oxoglutarate decarboxylase; AltName: Full=2-oxoglutarate carboxy-lyase; AltName: Full=Alpha-ketoglutarate decarboxylase Length = 1243 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L I++I NNQ TS + + + Sbjct: 654 VPMMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIIVNNQIGFTTSPYDSRSSEYCTD 713 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM+ Sbjct: 714 VAKMIGAPIFHVNGDDPEACVWVAKLAVDFRQKFKKDVVIDMLCYRRRGHNEGDDPSMTQ 773 Query: 292 PANY 295 P Y Sbjct: 774 PTMY 777 >gi|154501135|ref|ZP_02039173.1| hypothetical protein BACCAP_04824 [Bacteroides capillosus ATCC 29799] gi|150269827|gb|EDM97362.1| hypothetical protein BACCAP_04824 [Bacteroides capillosus ATCC 29799] Length = 304 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 25/183 (13%) Query: 144 MHMFSTKNGFYGGH-------------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDG 190 M +F + +G Y GH G +G +S G+A A K D GDG Sbjct: 112 MQLFRSIDGHYSGHPDMVHVKGVDMSTGSLGQGISAAVGMALAGKIDSKDYRVYAILGDG 171 Query: 191 AANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 ++GQV+E+ A ++L N+ V++ N+ + + + + + +F ++V Sbjct: 172 ELDEGQVWEAAMSADKYHLDNLCAVVDYNKMQIDGTTDDVMPLGDLAAKWAAFGWHVIEV 231 Query: 250 DGMDIRAVKATMDKA----------VAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 DG D A+ ++A +A+ KG +E + Y + G + +D + + Sbjct: 232 DGHDYAALADAFEQAKTVKGKPTVVLAHTVKGKGVSFMEGV-YTWHGKAPNDEQYAQAKS 290 Query: 300 EIN 302 E+ Sbjct: 291 ELE 293 >gi|269303254|gb|ACZ33354.1| 2-oxoglutarate dehydrogenase, E1 component [Chlamydophila pneumoniae LPCoLN] Length = 908 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 86/187 (45%), Gaps = 9/187 (4%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 + + ++ GD A + QG VYE+ ++ + + ++++ NN Y T+V R S Sbjct: 318 KEQSSLAILVHGDAAFSGQGVVYETLQLSRVPGYSTEGTLHIVVNN-YIGFTAVPRESRS 376 Query: 233 TNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 T + + IP +V+ D+ A ++ A+ +II++ YR GH+ SD Sbjct: 377 TPYCTDIAKMLGIPVFRVNSEDVVACIEAIEYALQVRERFSCDVIIDLCCYRKYGHNESD 436 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWA--SEGDLKEIEMNVRKIINNSVEFAQ- 348 + ++++ E R+ LL ++A SE L IE +++ +N + + Sbjct: 437 DPSVTAPLLYDQIKRKKSIRELFRQHLLEGQFADISEETLASIEKEIQESLNCEFQVLKG 496 Query: 349 SDKEPDP 355 + EP P Sbjct: 497 TGPEPFP 503 >gi|229101945|ref|ZP_04232659.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock3-28] gi|228681528|gb|EEL35691.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock3-28] Length = 955 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S V+ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVVLVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRTLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|225011189|ref|ZP_03701649.1| 2-oxoglutarate dehydrogenase, E1 subunit [Flavobacteria bacterium MS024-3C] gi|225004650|gb|EEG42612.1| 2-oxoglutarate dehydrogenase, E1 subunit [Flavobacteria bacterium MS024-3C] Length = 923 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 4/171 (2%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAAL--WNLN-VIYVIENNQYAMGTSVSRASAQTN 234 S + +V GD A A QG VYE +A L + N I+++ NNQ T+ A + T Sbjct: 331 SKVLPIVLHGDAAIAGQGLVYEVVQMAQLDGYKTNGTIHIVVNNQIGFTTNYLDARSSTY 390 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + G P + V+ D AV A+ Y K + I++L YR GH+ D Sbjct: 391 CTDVGKVTLSPVLHVNADDAEAVVHAALFALEYRMRFKRDVFIDLLGYRKYGHNEGDEPR 450 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + + + + +P E RL+ + +K +E + + + + +E Sbjct: 451 FTQPKLYKAIAKHQNPKEIYTARLIEEGIITPDFVKGLEQSYKDSLESDLE 501 >gi|72160970|ref|YP_288627.1| alpha-ketoglutarate decarboxylase [Thermobifida fusca YX] gi|71914702|gb|AAZ54604.1| 2-oxoglutarate dehydrogenase E1 component [Thermobifida fusca YX] Length = 1214 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 8/120 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV--SRASAQTNF 235 + ++ GD A A QG V E+ N++ L I++I NNQ TS SR+S Sbjct: 630 LPILIHGDAAFAGQGVVAETLNLSQLRGYRTGGTIHIIVNNQVGFTTSPKDSRSSVYATD 689 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 R V P V+G D AV A AY + ++I+++ YR RGH+ +D ++ Sbjct: 690 VARMV--QAPIFHVNGDDPEAVVRVARLAFAYRQEFNKDVVIDLVCYRRRGHNEADNPSF 747 >gi|148661035|ref|YP_001282558.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis H37Ra] gi|308375412|ref|ZP_07443803.2| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu007] gi|308376673|ref|ZP_07439612.2| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu008] gi|2695834|emb|CAA15904.1| PROBABLE 2-OXOGLUTARATE DEHYDROGENASE SUCA (Alpha-ketoglutarate dehydrogenase) [Mycobacterium tuberculosis H37Rv] gi|148505187|gb|ABQ72996.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis H37Ra] gi|308346378|gb|EFP35229.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu007] gi|308350319|gb|EFP39170.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu008] Length = 1214 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 625 VPLMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSSEYCTD 684 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 685 VAKMIGAPIFHVNGDDPEACVWVARLAVDFRQRFKKDVVIDMLCYRRRGHNEGDDPSMTN 744 Query: 292 PANY 295 P Y Sbjct: 745 PYVY 748 >gi|301168318|emb|CBW27908.1| putative transketolase, thiamine disphosphate-binding N subunit [Bacteriovorax marinus SJ] Length = 265 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 14/118 (11%) Query: 147 FSTKNGFYGGH-------------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 F +G GGH G +G +S+G G+A + + + ++ VV GDG N Sbjct: 89 FCKIDGILGGHPSRLKVPGVDVSTGSLGHGLSVGIGMAHSLRLSQKERKVVVILGDGECN 148 Query: 194 QGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD 250 +G ++E+ A+ L N+I +I++N+Y + FS++ SF +VD Sbjct: 149 EGSIWEAALSASKHKLNNLIVLIDHNKYQSYGPNTEVCPLDPFSRKWESFGFETFEVD 206 >gi|229114800|ref|ZP_04244214.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock1-3] gi|228668865|gb|EEL24293.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock1-3] Length = 955 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S V+ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVVLVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRTLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|120405429|ref|YP_955258.1| alpha-ketoglutarate decarboxylase [Mycobacterium vanbaalenii PYR-1] gi|119958247|gb|ABM15252.1| 2-oxoglutarate dehydrogenase E1 component [Mycobacterium vanbaalenii PYR-1] Length = 1262 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L I++I NNQ TS + + + Sbjct: 673 VPMMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIIVNNQIGFTTSPYDSRSSEYCTD 732 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM+ Sbjct: 733 VAKMIGAPIFHVNGDDPEACVWVAKLAVDFRQKFKKDVVIDMLCYRRRGHNEGDDPSMTQ 792 Query: 292 PANY 295 P Y Sbjct: 793 PTMY 796 >gi|312220445|emb|CBY00386.1| similar to 2-oxoglutarate dehydrogenase E1 component [Leptosphaeria maculans] Length = 1045 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 17/197 (8%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ L + I++I NNQ T + + S Sbjct: 423 VLLHGDAAFAGQGIVYETMGFHQLPQYHTGGTIHIIVNNQIGFTTDPRFSRSTPYCSDIA 482 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+M+ YR +GH+ +D + Sbjct: 483 KAIDAPVFHVNGDDVEALNFVCQLAADFRAQFKKDVVIDMVCYRKQGHNETDQPFFTQPL 542 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII----NNSVEFAQSDKE--- 352 ++ ++ ++LL K ++ D+ E + V ++ N S ++ + KE Sbjct: 543 MYKKIAQQPQTLDIYTQKLLEEKTFTKEDIDEHKAWVWGMLDESFNRSKDYTPTAKEWLT 602 Query: 353 ------PDPAELYSDIL 363 P EL +++L Sbjct: 603 SAWNGFKSPKELATEVL 619 >gi|288556781|ref|YP_003428716.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus pseudofirmus OF4] gi|288547941|gb|ADC51824.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus pseudofirmus OF4] Length = 948 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 5/120 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L +++I NN T + + T Sbjct: 358 SKAYSILIHGDAAFPGQGIVTETLNLSRLTGYQTGGSLHIIANNNIGFTTETYDSRSTTY 417 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F IP + V+ D A A M A Y + K +I+++ YR GH+ M +PA Sbjct: 418 ASDPAKGFEIPIVHVNADDPEACLAAMHLAFQYRKRFKKDFLIDLIGYRRFGHNEMDEPA 477 >gi|254364147|ref|ZP_04980193.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis str. Haarlem] gi|134149661|gb|EBA41706.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis str. Haarlem] Length = 1147 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 558 VPLMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSSEYCTD 617 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 618 VAKMIGAPIFHVNGDDPEACVWVARLAVDFRQRFKKDVVIDMLCYRRRGHNEGDDPSMTN 677 Query: 292 PANY 295 P Y Sbjct: 678 PYVY 681 >gi|284039761|ref|YP_003389691.1| transketolase [Spirosoma linguale DSM 74] gi|283819054|gb|ADB40892.1| Transketolase domain protein [Spirosoma linguale DSM 74] Length = 801 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 26/187 (13%) Query: 163 QVSLGTGIAFANKYRRSD--------------KICVVCFGDGAANQGQVYESFNIAALWN 208 QV G+A+A+K R++ +I GD + +QG +E+ N A + Sbjct: 146 QVPRSLGLAYASKLFRNNPELSDLTTFSHNGNEIVFSTIGDASTSQGMFWEAMNAAGVLQ 205 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN-------IPGMQVDGMDIRAVKATM 261 + ++ + ++ Y + V + + + SK F I V G D A+ T Sbjct: 206 VPLLMSVWDDGYGISVPVEYQTVKGSISKALAGFQRDSHDKGIEIFTVKGWDYPALLETY 265 Query: 262 DKAVAYCRAHKGPII--IEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRL 318 +A CR P++ I+ LT + +GHS S Y++++ + + HD R+ + Sbjct: 266 QQAAHICRTEHVPVLVHIQELT-QPQGHSTSGSHERYKSKQRL-AWEAEHDCNVLFRRWI 323 Query: 319 LHNKWAS 325 L N +A+ Sbjct: 324 LENGYAT 330 >gi|227876254|ref|ZP_03994370.1| 2-oxoglutarate decarboxylase [Mobiluncus mulieris ATCC 35243] gi|307701268|ref|ZP_07638290.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Mobiluncus mulieris FB024-16] gi|227843215|gb|EEJ53408.1| 2-oxoglutarate decarboxylase [Mobiluncus mulieris ATCC 35243] gi|307613662|gb|EFN92909.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Mobiluncus mulieris FB024-16] Length = 1267 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 10/135 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A QG VYE+ N++ L +++I NNQ TS + A + + Sbjct: 679 MPVLIHGDAAFVGQGVVYETLNMSQLKAYKTGGTLHIIVNNQIGFTTSPTNARSTIYCTD 738 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 +P V+ D V A + + +II+ML YR RGH SM+ Sbjct: 739 LAKGLQVPIFHVNADDPEMVTRVAGLAYRFQQKFHKDVIIDMLCYRRRGHNEGDDPSMTQ 798 Query: 292 PANYRTREEINEMRS 306 P Y + + R+ Sbjct: 799 PVMYGLIDNLPSTRT 813 >gi|198452989|ref|XP_002137577.1| GA26462 [Drosophila pseudoobscura pseudoobscura] gi|198132166|gb|EDY68135.1| GA26462 [Drosophila pseudoobscura pseudoobscura] Length = 626 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 2/101 (1%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++G G+A+ K + ++D V GDG + +G V+ES + A +NL N+ Sbjct: 120 GTGSLGQGVAVGAGMAYVGKNFDKADYRTYVIVGDGESAEGSVWESLHFAGYYNLDNLCV 179 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + + N+ + S + R SF + VDG DI Sbjct: 180 IFDVNRLGQSEATSLQHNMEVYRDRLESFGFNALVVDGHDI 220 >gi|119513276|ref|ZP_01632317.1| transketolase [Nodularia spumigena CCY9414] gi|119462064|gb|EAW43060.1| transketolase [Nodularia spumigena CCY9414] Length = 629 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 6/112 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKI---CVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G +G + +G GIA A KY D++ V GD +G V+E+F+ AA + L N+I Sbjct: 118 GSLGQGLPIGVGIALAGKYL--DQLPYHTWVLLGDSETAEGSVWEAFDHAAHYTLDNLIA 175 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 +I+ N+ ++KR +F +++DG D+ + AV Sbjct: 176 IIDVNRLGQRGQTELGWNTKAYAKRATAFGWQAIEIDGHDLTDIDQAYSAAV 227 >gi|229074619|ref|ZP_04207642.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock4-18] gi|228708501|gb|EEL60651.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock4-18] Length = 955 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S V+ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVVLVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRTLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|229095848|ref|ZP_04226827.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock3-29] gi|228687681|gb|EEL41580.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock3-29] Length = 955 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S V+ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVVLVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRTLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|15840693|ref|NP_335730.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis CDC1551] gi|148822465|ref|YP_001287219.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis F11] gi|161352467|ref|NP_215764.2| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis H37Rv] gi|167969566|ref|ZP_02551843.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis H37Ra] gi|254231505|ref|ZP_04924832.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis C] gi|254550254|ref|ZP_05140701.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|306775417|ref|ZP_07413754.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu001] gi|306781671|ref|ZP_07420008.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu002] gi|306788332|ref|ZP_07426654.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu004] gi|306792658|ref|ZP_07430960.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu005] gi|306797064|ref|ZP_07435366.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu006] gi|306967333|ref|ZP_07479994.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu009] gi|306971525|ref|ZP_07484186.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu010] gi|307079239|ref|ZP_07488409.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu011] gi|307083808|ref|ZP_07492921.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu012] gi|160395558|sp|A5U1U6|KGD_MYCTA RecName: Full=2-oxoglutarate decarboxylase; AltName: Full=2-oxoglutarate carboxy-lyase; AltName: Full=Alpha-ketoglutarate decarboxylase gi|160395583|sp|O50463|KGD_MYCTU RecName: Full=2-oxoglutarate decarboxylase; AltName: Full=2-oxoglutarate carboxy-lyase; AltName: Full=Alpha-ketoglutarate decarboxylase gi|13880881|gb|AAK45544.1| 2-oxoglutarate dehydrogenase E1 component [Mycobacterium tuberculosis CDC1551] gi|124600564|gb|EAY59574.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis C] gi|148720992|gb|ABR05617.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis F11] gi|308216037|gb|EFO75436.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu001] gi|308325632|gb|EFP14483.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu002] gi|308335019|gb|EFP23870.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu004] gi|308338828|gb|EFP27679.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu005] gi|308342513|gb|EFP31364.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu006] gi|308354949|gb|EFP43800.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu009] gi|308358896|gb|EFP47747.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu010] gi|308362859|gb|EFP51710.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu011] gi|308366525|gb|EFP55376.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu012] gi|323720205|gb|EGB29304.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis CDC1551A] Length = 1231 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 642 VPLMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSSEYCTD 701 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 702 VAKMIGAPIFHVNGDDPEACVWVARLAVDFRQRFKKDVVIDMLCYRRRGHNEGDDPSMTN 761 Query: 292 PANY 295 P Y Sbjct: 762 PYVY 765 >gi|319899502|ref|YP_004159599.1| alpha-ketoglutarate dehydrogenase [Bartonella clarridgeiae 73] gi|319403470|emb|CBI77050.1| alpha-ketoglutarate dehydrogenase [Bartonella clarridgeiae 73] Length = 999 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 15/189 (7%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A + QG + E+F ++ L V I+VI NNQ T+ + + Sbjct: 396 RSKVMPLLIHGDAAFSGQGVIQETFGLSDLRGYRVAGSIHVIINNQIGFTTNPRFSRSSP 455 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV A + + P++I+M YR GH+ D Sbjct: 456 YPSDVAKMIDAPIFHVNGDDPEAVVFVAKVATEFRQIFHKPVVIDMFCYRRYGHNEGDEP 515 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG--DLKEIEMN---VRKIINNSVEFAQ 348 ++ T+ + + NH I Q L ++ +EG D +E E R + N E + Sbjct: 516 SF-TQPLMYKAIRNHKTIVQ----LYSDQLIAEGVIDPQEFEQKKKMWRDKLENEFEASA 570 Query: 349 SDKEPDPAE 357 S K P+ A+ Sbjct: 571 SYK-PNKAD 578 >gi|306819529|ref|ZP_07453236.1| 2-oxoglutarate dehydrogenase E1 component [Mobiluncus mulieris ATCC 35239] gi|304647821|gb|EFM45139.1| 2-oxoglutarate dehydrogenase E1 component [Mobiluncus mulieris ATCC 35239] Length = 1267 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 10/135 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A QG VYE+ N++ L +++I NNQ TS + A + + Sbjct: 679 MPVLIHGDAAFVGQGVVYETLNMSQLKAYKTGGTLHIIVNNQIGFTTSPTNARSTIYCTD 738 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 +P V+ D V A + + +II+ML YR RGH SM+ Sbjct: 739 LAKGLQVPIFHVNADDPEMVTRVAGLAYRFQQKFHKDVIIDMLCYRRRGHNEGDDPSMTQ 798 Query: 292 PANYRTREEINEMRS 306 P Y + + R+ Sbjct: 799 PVMYGLIDNLPSTRT 813 >gi|322436376|ref|YP_004218588.1| 2-oxoglutarate dehydrogenase, E1 subunit [Acidobacterium sp. MP5ACTX9] gi|321164103|gb|ADW69808.1| 2-oxoglutarate dehydrogenase, E1 subunit [Acidobacterium sp. MP5ACTX9] Length = 840 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 18/152 (11%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG + ES N+A L NV I+VI NN T+V S + F+ Sbjct: 262 LPLIIHGDAAFAGQGILAESLNMAVLHGYNVGGTIHVIVNNLLGF-TAVPEESNSSRFAT 320 Query: 238 R-GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD----- 291 IP V+ D AV A Y K ++++++ YR GHS D Sbjct: 321 DIAKRLPIPIFHVNAEDPDAVLRVAAIAAEYRHKFKSDVVVDLIGYRRHGHSEVDDPTVT 380 Query: 292 -PANYRTREEINEMRSNH------DPIEQVRK 316 P Y +++ E+ + DP E+ K Sbjct: 381 SPKRYALIKDLPELYKTYAKRIGVDPTEEAAK 412 >gi|117925684|ref|YP_866301.1| 2-oxoglutarate dehydrogenase E1 component [Magnetococcus sp. MC-1] gi|117609440|gb|ABK44895.1| 2-oxoglutarate dehydrogenase E1 component [Magnetococcus sp. MC-1] Length = 981 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 10/167 (5%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG V ES ++ L I++I NNQ T+ + + S Sbjct: 373 LIMHGDAAFAGQGLVPESLALSGLKGYQTGGTIHLIVNNQIGFTTNPRNSRSSPYPSDVA 432 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 P V+G D AV A+ Y +A ++I+M YR GH+ D ++ T+ Sbjct: 433 KMIQAPIFHVNGDDPEAVVHAARIAIEYRQAFSKDVVIDMWCYRRHGHNEGDEPSF-TQP 491 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE-MNVRKIINNSVE 345 + +NH QV + K EG LKE E + K +N +E Sbjct: 492 IMYRAIANHPTTRQVYAQ----KLEREGVLKEGEGEQIYKEFHNELE 534 >gi|293392043|ref|ZP_06636377.1| alpha-ketoglutarate decarboxylase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952577|gb|EFE02696.1| alpha-ketoglutarate decarboxylase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 935 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 5/166 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + V GD A A QG V E+ N++ V I ++ NNQ TS + T F + Sbjct: 353 LAVTVHGDSAVAGQGIVQETLNMSNARGYKVGGTIRIVINNQIGFTTSNPNDTRSTEFCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 P + V+G D AV AV Y A K I I++++YR GH+ +D Sbjct: 413 DIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNAFKRDIFIDLISYRRHGHNEADEPLAT 472 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 ++ + P + RL+ SE D E+ R ++N Sbjct: 473 QPMMYGIIKKHPTPPKVYAARLIQEVTISEEDATEMTNLYRDALDN 518 >gi|147677531|ref|YP_001211746.1| deoxyxylulose-5-phosphate synthase [Pelotomaculum thermopropionicum SI] gi|189027780|sp|A5D2Z6|DXS_PELTS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|146273628|dbj|BAF59377.1| deoxyxylulose-5-phosphate synthase [Pelotomaculum thermopropionicum SI] Length = 637 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 51/189 (26%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +LG IA K + + V+ GDGA G +E+ N A Sbjct: 107 SVHDAFGTGHSSTSISAALGMAIARDLKGEKYSVVAVI--GDGAMTGGIAFEALNHAGHL 164 Query: 208 NLNVIYVIENNQY-------AMGTSVSRASAQTNFSK---------RGVSFN-------- 243 N+I V+ +N+ AM ++R +S+ R + Sbjct: 165 KCNLIVVLNDNEMSIAQNVGAMSGYLTRLRTDPMYSRGKEEIEQLLRRIPIGSALLRLGE 224 Query: 244 ----------IPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 +PGM VDG D+RA+ + A RA KGP+++ +LT Sbjct: 225 RVKDSLKYLVVPGMIFEELGFTYLGPVDGHDLRAITTVLQHA----RARKGPVLVHVLTK 280 Query: 283 RYRGHSMSD 291 + +G+S ++ Sbjct: 281 KGKGYSPAE 289 >gi|323356953|ref|YP_004223349.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Microbacterium testaceum StLB037] gi|323273324|dbj|BAJ73469.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Microbacterium testaceum StLB037] Length = 1225 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 26/237 (10%) Query: 135 GISKGKGGSMHMFSTKNGFYGGHG------IVGAQVSLGT------GIAFANKYRRS--- 179 G +G G + T+ F G +G + L T GI A + R+ Sbjct: 585 GSKRGSGDVKYHLGTEGTFVGDNGEELPVYLAANPSHLETVDGVLEGIVRAKQDRKPIGS 644 Query: 180 -DKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 + ++ GD A A QG V E+ ++ L I+V+ NNQ T+ + A Sbjct: 645 FSWLPILVHGDAAFAGQGVVVETLQMSQLRGYRTGGTIHVVVNNQVGFTTTPTDARTSVY 704 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + + P + V+G D AV + A Y ++I+++ YR RGH+ D + Sbjct: 705 ATDVAKTIQAPVLHVNGDDPEAVVRAAELAFLYREEFHRDVVIDLVCYRRRGHNEGDDPS 764 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM-NVRKIINNSVEFAQSD 350 + +N ++ +RL GD+ E E ++ N +E A +D Sbjct: 765 M-----TQPLMTNLIEAKRSVRRLYTEALVGRGDITEDEYEQAKQDFQNRLEVAFAD 816 >gi|306783968|ref|ZP_07422290.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu003] gi|308331204|gb|EFP20055.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis SUMu003] Length = 1231 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 642 VPLMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSSEYCTD 701 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 702 VAKMIGAPIFHVNGDDPEACVWVARLAVDFRQRFKKDVVIDMLCYRRRGHNEGDDPSMTN 761 Query: 292 PANY 295 P Y Sbjct: 762 PYVY 765 >gi|253799707|ref|YP_003032708.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis KZN 1435] gi|289554963|ref|ZP_06444173.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis KZN 605] gi|297633797|ref|ZP_06951577.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis KZN 4207] gi|297730783|ref|ZP_06959901.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis KZN R506] gi|313658114|ref|ZP_07814994.1| alpha-ketoglutarate decarboxylase [Mycobacterium tuberculosis KZN V2475] gi|253321210|gb|ACT25813.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis KZN 1435] gi|289439595|gb|EFD22088.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis KZN 605] gi|328459453|gb|AEB04876.1| 2-oxoglutarate dehydrogenase sucA [Mycobacterium tuberculosis KZN 4207] Length = 1231 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 642 VPLMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSSEYCTD 701 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + K ++I+ML YR RGH SM++ Sbjct: 702 VAKMIGAPIFHVNGDDPEACVWVARLAVDFRQRFKKDVVIDMLCYRRRGHNEGDDPSMTN 761 Query: 292 PANY 295 P Y Sbjct: 762 PYVY 765 >gi|117927794|ref|YP_872345.1| alpha-ketoglutarate decarboxylase [Acidothermus cellulolyticus 11B] gi|117648257|gb|ABK52359.1| 2-oxoglutarate dehydrogenase E1 component [Acidothermus cellulolyticus 11B] Length = 1233 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 4/108 (3%) Query: 188 GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 GD A A QG V E+ N++ L I+V+ NNQ T+ S A + + Sbjct: 662 GDAAFAGQGVVAETLNLSQLRGYRTGGTIHVVVNNQVGFTTAPSAARSSVYATDVARMIQ 721 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+G D A A+ + +A K ++I+++ YR RGH+ +D Sbjct: 722 APIFHVNGDDPEAAVRVARIALDFRQAFKKDVVIDLVCYRRRGHNEAD 769 >gi|284931472|gb|ADC31410.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mycoplasma gallisepticum str. F] Length = 581 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/159 (22%), Positives = 77/159 (48%), Gaps = 15/159 (9%) Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 + G G + +K +Y G G +S+ +G+ F+N+ +++ + GDG+ G Sbjct: 94 TNGLSGLQDLNESKYDYYAG-GHTSNSLSVASGLVFSNQLLDKEQLIIPVIGDGSIANGI 152 Query: 197 VYESFNIAALWNLNVIYVIENNQYAMGTS--------VSRASAQTNFSKRGVSFNIPGMQ 248 +E+ N + + +I ++ +NQ ++ + + QTNF K+ N ++ Sbjct: 153 AFEAINNISFHHHKMIIILNDNQMSISENFGEFNKLLTNLKDDQTNFFKQ---LNYEYLK 209 Query: 249 V-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + DG D+ + A ++KA + + P+I+ + T + +G Sbjct: 210 IEDGHDLDQIFAGLEKAKELVK--QKPMIVHVKTIKGKG 246 >gi|269977994|ref|ZP_06184947.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Mobiluncus mulieris 28-1] gi|269933841|gb|EEZ90422.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Mobiluncus mulieris 28-1] Length = 1267 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 10/135 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A QG VYE+ N++ L +++I NNQ TS + A + + Sbjct: 679 MPVLIHGDAAFVGQGVVYETLNMSQLKAYKTGGTLHIIVNNQIGFTTSPTNARSTIYCTD 738 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 +P V+ D V A + + +II+ML YR RGH SM+ Sbjct: 739 LAKGLQVPIFHVNADDPEMVTRVAGLAYRFQQKFHKDVIIDMLCYRRRGHNEGDDPSMTQ 798 Query: 292 PANYRTREEINEMRS 306 P Y + + R+ Sbjct: 799 PVMYGLIDNLPSTRT 813 >gi|229828868|ref|ZP_04454937.1| hypothetical protein GCWU000342_00953 [Shuttleworthia satelles DSM 14600] gi|229792031|gb|EEP28145.1| hypothetical protein GCWU000342_00953 [Shuttleworthia satelles DSM 14600] Length = 626 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 60/221 (27%) Query: 129 LTGRQGGISKGKG-GSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+G + + G + F + + F GH +S G G+A A + + D Sbjct: 80 LTGRKGDFDRLRAMGGLAGFPKREESDCDIFGTGHS--STSISAGLGLAVARELKGEDYK 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM-----GTSVSRASAQT---- 233 GDGA G VYE+ N AA + N + ++ +N ++ G S++ A +T Sbjct: 138 IFSVIGDGAMTGGMVYEALNNAAEFKKNFVIILNDNNMSISRNVGGLSMNLARMRTSENY 197 Query: 234 -NF------------------------SKRGV-SFNIPGM-----------QVDGMDIRA 256 NF +K G+ IPGM +DG DI Sbjct: 198 KNFKSGMQSSLEKIPVYGNRIVDRMRKTKEGIKQLVIPGMMFEQMGIMYLGPIDGSDIEG 257 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD--PANY 295 ++ +A +GP+I+ +LT + RG + ++ PA + Sbjct: 258 MRQIFLEATKI----EGPVIVHVLTTKGRGFAPAERHPAKF 294 >gi|115442688|ref|XP_001218151.1| hypothetical protein ATEG_09529 [Aspergillus terreus NIH2624] gi|114188020|gb|EAU29720.1| hypothetical protein ATEG_09529 [Aspergillus terreus NIH2624] Length = 1008 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 10/193 (5%) Query: 162 AQVSLGTGIAFANKYRR----SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IY 213 +Q +L G+A A +++ + + + D A A QG VYE+ +A L + I+ Sbjct: 372 SQNTLAQGMARALQHQSGGDTASTLVLNSHTDAAFAGQGVVYETLGLAGLKSYGTGGTIH 431 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 ++ NNQ T A S S N P V+ D+ AV A AY + Sbjct: 432 LLINNQIGFTTDAESARTSPYASDIAKSINAPVFHVNADDVEAVVFLCKLAAAYRAEFRK 491 Query: 274 PIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDP-IEQVRKRLLHNKWASEGDLKEI 332 ++++ YR RGH+ D + T+ + E +N P +E +L+ + + +++ Sbjct: 492 DCWVDVICYRRRGHNEMDQPAF-TQPLMYEQIANKVPQLELYVAQLVKEGTVTREEAQQM 550 Query: 333 EMNVRKIINNSVE 345 E +V K + S E Sbjct: 551 EQDVWKKLTASFE 563 >gi|13235421|emb|CAC33613.1| sucA [Rickettsia montanensis] Length = 770 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L ++ ++ + NNQ + T+ +RAS Sbjct: 340 KRSKVKAILVHGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANTADTRAS 399 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV + AV Y + +++E++ YR GH+ Sbjct: 400 RYSTEFAKIIAA---PILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKYGHNE 456 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N +++ P Sbjct: 457 GDEPMYTQGKMYNIIKNKLTP 477 >gi|146332527|gb|ABQ22769.1| mitochondrial 2-oxoisovalerate dehydrogenase alpha subunit precursor-like protein [Callithrix jacchus] Length = 115 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Query: 282 YRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 YR HS SD ++ YR+ +E+N PI ++R LL W E K RK + Sbjct: 1 YRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRKKV 60 Query: 341 NNSVEFAQSDKEPDPAELYSDI 362 + E A+ +P+P L+SD+ Sbjct: 61 MEAFEQAERKPKPNPNLLFSDV 82 >gi|145608396|ref|XP_001408601.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|145015872|gb|EDK00362.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 1008 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 17/197 (8%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE +L + I+++ NNQ T A + + Sbjct: 386 VLLHGDAAIAGQGVVYECLGFHSLPGYSTGGTIHLVVNNQIGFTTDPRFARSTAYCTDIA 445 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+ D+ AV A + + +II+++ YR GH+ +D ++ Sbjct: 446 KAIDAPVFHVNADDVEAVNYMCQLAADWRAEFQQDVIIDLVCYRKHGHNETDQPSFTQPL 505 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV----EFAQSDKE--- 352 +++S +E K+L+ + ++ D++E + V ++ +S E+ + KE Sbjct: 506 MYKKIQSKDSQLETYIKKLIEDGTFTKEDIEEHKKWVWGMLEDSFSKSKEYQPTSKEWTT 565 Query: 353 ------PDPAELYSDIL 363 P EL +++L Sbjct: 566 SAWNGFKSPKELATEVL 582 >gi|256028566|ref|ZP_05442400.1| transketolase subunit A [Fusobacterium sp. D11] gi|289766486|ref|ZP_06525864.1| transketolase subunit A [Fusobacterium sp. D11] gi|289718041|gb|EFD82053.1| transketolase subunit A [Fusobacterium sp. D11] Length = 270 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + V GDG +GQ++E+ AA + L N+ ++ Sbjct: 116 GSLGQGLSVANGMALNAKMFNENYRTYVILGDGEIQEGQIWEAAMTAAHYKLDNLCAFLD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + +VS K+ +F +++DG D + + +DKA R KG P Sbjct: 176 NNNLQIDGNVSEIMGVEPLDKKWEAFGWNVIKIDGHDFEQILSALDKA----RECKGKPT 231 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 232 MIIAKTIKGKGVSF 245 >gi|118619605|ref|YP_907937.1| alpha-ketoglutarate decarboxylase [Mycobacterium ulcerans Agy99] gi|160395554|sp|A0PVU7|KGD_MYCUA RecName: Full=2-oxoglutarate decarboxylase; AltName: Full=2-oxoglutarate carboxy-lyase; AltName: Full=Alpha-ketoglutarate decarboxylase gi|118571715|gb|ABL06466.1| alpha-ketoglutarate decarboxylase Kgd [Mycobacterium ulcerans Agy99] Length = 1238 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 649 VPMMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSTEYCTD 708 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 + P V+G D A AV + + +II+ML YR RGH SM++ Sbjct: 709 VAKTIGAPIFHVNGDDPEACVWVARLAVDFRQRFNKDVIIDMLCYRRRGHNEGDDPSMTN 768 Query: 292 PANY 295 P Y Sbjct: 769 PRMY 772 >gi|114565811|ref|YP_752965.1| transketolase-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336746|gb|ABI67594.1| transketolase subunit A [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 275 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A + + D GDG +G V+E+ AA + L N++ +++ Sbjct: 121 GSLGQGISWAVGMALAARIDQRDYRVYALLGDGELEEGMVWEAAMAAAHYRLDNLLALVD 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + ++ + + + V+F +++DG D R + ++ A R+ KG P Sbjct: 181 NNGLQIDGKIAEVMSPEPIADKFVAFGWNTLEIDGHDHRQIMEALNSA----RSFKGSPT 236 Query: 276 IIEMLTYRYRGHS 288 I T + +G S Sbjct: 237 AIIAHTTKGKGCS 249 >gi|325184868|emb|CCA19360.1| unnamed protein product [Albugo laibachii Nc14] Length = 1038 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 4/112 (3%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD + + QG VYE+ ++A L N + I+V+ NNQ T + + + S G Sbjct: 410 LLLHGDASFSGQGVVYETMHLAGLENYDTGGTIHVVVNNQIGFTTDPTNSRSSQYCSDVG 469 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + +IP + V+ D AV + A + + + +II + YR GH+ D Sbjct: 470 KAMDIPILHVNADDPIAVVKVFELAAEWRQIWRSDVIINLTCYRKFGHNEID 521 >gi|269794283|ref|YP_003313738.1| 2-oxoglutarate dehydrogenase E1 component [Sanguibacter keddieii DSM 10542] gi|269096468|gb|ACZ20904.1| 2-oxoglutarate dehydrogenase E1 component [Sanguibacter keddieii DSM 10542] Length = 1283 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRASAQTNF 235 + ++ GD A A QG V E N+A L I+V+ NNQ + G S SR++ Sbjct: 697 LPILIHGDAAFAGQGVVTEVLNLAQLRGYRTGGTIHVVINNQVGFTTGPSSSRSTLYCTD 756 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SM 289 +G+ +P V+G D AV A + +II+M+ YR RGH SM Sbjct: 757 VAKGL--QVPIFHVNGDDPEAVVRVAQLAFEFREQFDRDVIIDMVCYRRRGHNEGDDPSM 814 Query: 290 SDPANYRTREEINEMR 305 + P Y E +R Sbjct: 815 TQPLMYNLIEAKRSVR 830 >gi|153813530|ref|ZP_01966198.1| hypothetical protein RUMOBE_03952 [Ruminococcus obeum ATCC 29174] gi|149830401|gb|EDM85493.1| hypothetical protein RUMOBE_03952 [Ruminococcus obeum ATCC 29174] Length = 279 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 8/150 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K GDG +GQV+E+ A L N++ V++ Sbjct: 115 GSLGQGISAAVGMALSAKLSNESYRVYTLLGDGEIQEGQVWEAAMFAGFRKLDNLVVVVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + V + K+ +FN + V DG D+ +KA D+A + KG P Sbjct: 175 NNGLQIDGKVDEVCSPYPIDKKFEAFNFHVINVADGNDMDQLKAAFDEA----KTVKGMP 230 Query: 275 IIIEMLTYRYRGHS-MSDPANYRTREEINE 303 I M T + +G S M + A + + +E Sbjct: 231 TAIIMKTVKGKGVSFMENQAGWHGKAPNDE 260 >gi|15805318|ref|NP_294010.1| 2-oxoglutarate dehydrogenase E1 component [Deinococcus radiodurans R1] gi|6457960|gb|AAF09869.1|AE001890_1 2-oxoglutarate dehydrogenase, E1 component [Deinococcus radiodurans R1] Length = 956 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 21/175 (12%) Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA- 191 + GG MH+ F H + + V G+ A + RR D + + GD A Sbjct: 303 RTPGGPMHL---AMAFNPSHLEIVSPVVHGS--VRARQDRRGDTERKQVLPITVHGDAAV 357 Query: 192 ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGM 247 + QG V E+ N + L I ++ NNQ S R S + + N P M Sbjct: 358 SGQGVVMETLNFSRLRGFTTGGAIRIVINNQIGFTISDPRDSRSSRYCTDVAKIANAPVM 417 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSDPANYR 296 V+G D AV D A+AY + + I+++ +R GH+ M+ P YR Sbjct: 418 HVNGDDPEAVAFCGDLALAYRQEFGKDVFIDLICFRRNGHNEGDEPRMTQPVMYR 472 >gi|320449361|ref|YP_004201457.1| oxoglutarate dehydrogenase, E1 component [Thermus scotoductus SA-01] gi|320149530|gb|ADW20908.1| oxoglutarate dehydrogenase, E1 component [Thermus scotoductus SA-01] Length = 910 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 9/199 (4%) Query: 164 VSLGTGIAFANKYR---RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 V+LG A ++++ R + ++ GD A +G V E+ N++ L V ++V+ Sbjct: 309 VTLGRLRAKQDRFQDRERKRGLAILVHGDSAFIGEGIVQETLNLSRLPGYRVGGTLHVVA 368 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ T ++ + P V+ + + + A+ Y + ++ Sbjct: 369 NNQLGFTTLPEEYTSCRYPTDIAKMVGAPVFHVNAEALDELWFVLGLALEYRQRFGKDVV 428 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 I+++ YR RGH+ +D + + +P + +RLL +EG+LK E Sbjct: 429 IDLVGYRRRGHNETDEPTFTQPPMYALISKKPEPWKVYGERLLAEGVVAEGELKAKEEAY 488 Query: 337 RKIINNSVEFAQSDKEPDP 355 + N EFA+ EP P Sbjct: 489 --LANLESEFARVKAEPGP 505 >gi|192359900|ref|YP_001981991.1| 2-oxoglutarate dehydrogenase E1 component [Cellvibrio japonicus Ueda107] gi|190686065|gb|ACE83743.1| 2-oxoglutarate dehydrogenase, E1 component [Cellvibrio japonicus Ueda107] Length = 943 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 42/279 (15%) Query: 46 EFNKEQELSAYRLML----LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 EF KEQ L+ + L R + K G+ GG + + V +K + T Sbjct: 201 EFTKEQRLALLERLTAAEGLERHLDSKYPGTKRFGLEGGESFIPL----VDALVKRAGTY 256 Query: 102 GDQMITAYREH-GHILAC----GVDASKIMAELTGRQGGISKG--------------KGG 142 G + I H G + A G +++ AE G++ + G GG Sbjct: 257 GAKEIVLGMAHRGRLNALVNVFGKSPAELFAEFDGKRSLNTSGDVKYHSGFSSNVMTPGG 316 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQ 196 +HM F H + + V G+ A + RR+D + +V GD A A QG Sbjct: 317 ELHM---AMAFNPSHLEIVSPVVEGS--VRARQDRRNDNSGAKVVPIVVHGDAAFAGQGV 371 Query: 197 VYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGM 252 V E+F ++ A ++++ NNQ T+ S T + + P V+G Sbjct: 372 VMETFQMSQTRAYGTGGTLHIVINNQVGFTTNKREDSRSTEYCTDVAKMIETPIFHVNGD 431 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 D AV A+ Y K ++I+++ YR RGH+ +D Sbjct: 432 DPEAVLFIAQLAMDYRYEFKKDVVIDLVCYRRRGHNETD 470 >gi|82751005|ref|YP_416746.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus RF122] gi|123549163|sp|Q2YY05|ODO1_STAAB RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|82656536|emb|CAI80958.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus RF122] Length = 932 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 12/188 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GDGA QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDGAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKII---NNSVEFAQSDKEP 353 +R N D +E V K+L++ SE ++ V+K + ++ + A P Sbjct: 469 PVPYQNIRKN-DSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKMDNP 527 Query: 354 D---PAEL 358 D PAEL Sbjct: 528 DMEKPAEL 535 >gi|331698866|ref|YP_004335105.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pseudonocardia dioxanivorans CB1190] gi|326953555|gb|AEA27252.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pseudonocardia dioxanivorans CB1190] Length = 1263 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L ++V+ NNQ T+ ++ + + Sbjct: 679 LPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTVHVVVNNQVGFTTAPEQSRSSQYCTD 738 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV Y ++I+M+ YR RGH SM+ Sbjct: 739 VAKMIGAPVFHVNGDDPEACVWVAKLAVEYRERWNNDVVIDMICYRRRGHNEGDDPSMTQ 798 Query: 292 PANY 295 PA Y Sbjct: 799 PAMY 802 >gi|183984166|ref|YP_001852457.1| alpha-ketoglutarate decarboxylase Kgd [Mycobacterium marinum M] gi|183177492|gb|ACC42602.1| alpha-ketoglutarate decarboxylase Kgd [Mycobacterium marinum M] Length = 1251 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 662 VPMMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSTEYCTD 721 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 + P V+G D A AV + + +II+ML YR RGH SM++ Sbjct: 722 VAKTIGAPIFHVNGDDPEACVWVARLAVDFRQRFNKDVIIDMLCYRRRGHNEGDDPSMTN 781 Query: 292 PANY 295 P Y Sbjct: 782 PRMY 785 >gi|197121243|ref|YP_002133194.1| 2-oxoglutarate dehydrogenase E1 component [Anaeromyxobacter sp. K] gi|196171092|gb|ACG72065.1| 2-oxoglutarate dehydrogenase, E1 subunit [Anaeromyxobacter sp. K] Length = 939 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 10/133 (7%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 + + R + V+ GD A A QG V E+ N++ L V I+VI NNQ TS A Sbjct: 332 HDFERVRSLPVLVHGDAAFAGQGIVAEALNMSQLEAYGVGGTIHVIVNNQVGFTTSPRDA 391 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-- 287 + T + IP + V+G D+ AV + A + + ++I++ YR GH Sbjct: 392 RSTTYCTGPARMLQIPIIHVNGEDLEAVAQAVLLAADFRQRFHRDVVIDLWAYRRHGHNE 451 Query: 288 ----SMSDPANYR 296 S + P YR Sbjct: 452 GDEPSFTQPVMYR 464 >gi|158425637|ref|YP_001526929.1| 2-oxoglutarate dehydrogenase E1 component [Azorhizobium caulinodans ORS 571] gi|158332526|dbj|BAF90011.1| 2-oxoglutarate dehydrogenase [Azorhizobium caulinodans ORS 571] Length = 985 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 11/224 (4%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF---GDGA-ANQGQ 196 G +H+ T N H + V LG A ++ +D++ V+ GD A A QG Sbjct: 344 GNRVHVSLTANP---SHLEIVDPVVLGKARAKQDQMHDTDRVAVLPLLIHGDAAFAGQGV 400 Query: 197 VYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 V E ++ L ++VI NNQ T+ + + S P V+G D Sbjct: 401 VAECLGLSGLKGHRTGGSLHVIINNQIGFTTNPRYSRSSPYPSDVAKMIEAPIFHVNGDD 460 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 AV A+ + + P++I++ YR GH+ D ++ +R + +E Sbjct: 461 PEAVTFCAKVAIEFRQRFHKPVVIDIFCYRRFGHNEGDEPSFTQPHMYKVIRQHPTTLEL 520 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 K+L + G+L ++ R + E Q K P+ A+ Sbjct: 521 YGKKLEAEGVIAAGELDQMRAEWRNRLEGEYEAGQHYK-PNKAD 563 >gi|167755267|ref|ZP_02427394.1| hypothetical protein CLORAM_00772 [Clostridium ramosum DSM 1402] gi|237735015|ref|ZP_04565496.1| transketolase [Mollicutes bacterium D7] gi|167705317|gb|EDS19896.1| hypothetical protein CLORAM_00772 [Clostridium ramosum DSM 1402] gi|229381791|gb|EEO31882.1| transketolase [Coprobacillus sp. D7] Length = 266 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S GI ANKY+ ++ V GDG +GQVYE+ A+ + L + I ++ Sbjct: 111 GSLGQGISAAVGITLANKYKNNNYYTYVICGDGEFEEGQVYEALMAASHYQLSHFILFLD 170 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + + F ++ ++F + ++G D ++A ++ A Sbjct: 171 YNGLQIDGKIVDVIGPQPFLEKFLAFGFEVININGHDFDEIEAAVEMA 218 >gi|220915947|ref|YP_002491251.1| 2-oxoglutarate dehydrogenase, E1 subunit [Anaeromyxobacter dehalogenans 2CP-1] gi|219953801|gb|ACL64185.1| 2-oxoglutarate dehydrogenase, E1 subunit [Anaeromyxobacter dehalogenans 2CP-1] Length = 939 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 10/133 (7%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 + + R + V+ GD A A QG V E+ N++ L V I+VI NNQ TS A Sbjct: 332 HDFERVRSLPVLVHGDAAFAGQGIVAEALNMSQLEAYGVGGTIHVIVNNQVGFTTSPRDA 391 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-- 287 + T + IP + V+G D+ AV + A + + ++I++ YR GH Sbjct: 392 RSTTYCTGPARMLQIPIIHVNGEDLEAVAQAVLLAADFRQRFHRDVVIDLWAYRRHGHNE 451 Query: 288 ----SMSDPANYR 296 S + P YR Sbjct: 452 GDEPSFTQPVMYR 464 >gi|163747641|ref|ZP_02154987.1| putative transketolase alpha subunit protein [Oceanibulbus indolifex HEL-45] gi|161379060|gb|EDQ03483.1| putative transketolase alpha subunit protein [Oceanibulbus indolifex HEL-45] Length = 216 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 5/122 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G A K + S DG +G +E+ A W L N+I +++ Sbjct: 56 GSLGHGLGIAVGAALGLKRKESPAFVYNLMSDGELGEGSTWEAVMSAVQWKLDNLICLVD 115 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 NNQ A G + + A AQ + K+ +F +VDG D+ AV D+ A H GP Sbjct: 116 FNNQQADGPTRA-ALAQGDEEKKWAAFGWHAQRVDGNDLDAVVTAFDE--ARNTDHAGPR 172 Query: 276 II 277 +I Sbjct: 173 VI 174 >gi|152979227|ref|YP_001344856.1| 2-oxoglutarate dehydrogenase, E1 subunit [Actinobacillus succinogenes 130Z] gi|150840950|gb|ABR74921.1| 2-oxoglutarate dehydrogenase, E1 subunit [Actinobacillus succinogenes 130Z] Length = 941 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 31/248 (12%) Query: 119 GVDASKIMAELTGRQGGISKG--------------KGGSMHMFSTKNGFYGGHGIVGAQV 164 G + S++ E G+ G G +GG +H+ F H + + V Sbjct: 279 GKEPSQLFDEFAGKHSGDRTGDVKYHQGYSSDFMTEGGVVHL---ALAFNPSHLEIVSPV 335 Query: 165 SLGTGIAFANKYRRSDK-----ICVVCFGDGAA-NQGQVYESFNIAALWNLNV---IYVI 215 +G+ A + R D+ + V GD A QG V E+ N++A NV I V+ Sbjct: 336 VIGS--VRARQKRLGDQTKDQVLPVTVHGDSAVIGQGVVQETLNMSATRGYNVGGTIRVV 393 Query: 216 ENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 NNQ TS ++ + T + + P + V+G D A+ AV + K Sbjct: 394 INNQIGFTTSNTKDTRSTEYCTDIAKMIEAPVIHVNGDDPEAIAYAARMAVEFRMRFKRD 453 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIE 333 I I++++YR GH+ +D T+ + ++ H +V RL+ +E D E+ Sbjct: 454 IFIDLVSYRRHGHNEADEP-LATQPVMYKLIKKHPTARKVYADRLVSEGVINESDAIELM 512 Query: 334 MNVRKIIN 341 + RK ++ Sbjct: 513 NDYRKALD 520 >gi|319407856|emb|CBI81509.1| alpha-ketoglutarate dehydrogenase [Bartonella sp. 1-1C] Length = 999 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 9/165 (5%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A + QG + E+F ++ L V I+VI NNQ T+ + + Sbjct: 396 RSKVLPLLIHGDAAFSGQGVIQETFGLSDLRGYRVAGSIHVIINNQIGFTTNPRFSRSSP 455 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV A + + P++I+M YR GH+ D Sbjct: 456 YPSDVAKMIDAPIFHVNGDDPEAVVFVAKVATEFRQIFHKPVVIDMFCYRRYGHNEGDEP 515 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 ++ T+ + + NH Q L N+ +EG + E+ +K Sbjct: 516 SF-TQPLMYKAIRNHKTTVQ----LYSNQLIAEGVIGPQEVEQKK 555 >gi|229016612|ref|ZP_04173551.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus AH1273] gi|229022821|ref|ZP_04179344.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus AH1272] gi|228738480|gb|EEL88953.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus AH1272] gi|228744699|gb|EEL94762.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus AH1273] Length = 955 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGVVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRTLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|152974770|ref|YP_001374287.1| alpha-ketoglutarate decarboxylase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189029256|sp|A7GMD4|ODO1_BACCN RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|152023522|gb|ABS21292.1| 2-oxoglutarate dehydrogenase, E1 subunit [Bacillus cytotoxicus NVH 391-98] Length = 958 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I++I NN T + + Sbjct: 350 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHIIANNTIGFTTDSYDSRSTRY 409 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K I+I+++ YR GH+ M DPA Sbjct: 410 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRLRFKKDILIDLIGYRRYGHNEMDDPA 469 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 470 --VTQPQVYKKIKNHPTVRAI 488 >gi|260431534|ref|ZP_05785505.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Silicibacter lacuscaerulensis ITI-1157] gi|260415362|gb|EEX08621.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Silicibacter lacuscaerulensis ITI-1157] Length = 984 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 83/184 (45%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + V+ GD A A QG V E F ++ L ++++ NNQ T+ + + Sbjct: 382 RTQVMGVLLHGDAAFAGQGVVAEGFGLSGLRGHRTGGTMHIVVNNQIGFTTAPHFSRSSP 441 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+G D AV A + + ++I+M YR GH+ D Sbjct: 442 YPTDIALMVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDMFCYRRFGHNEGDEP 501 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +++++ + +RL+ + EG++++++ + +N+ E A+ K P Sbjct: 502 MFTNPIMYKKIKTHKTTLSLYTERLVKDGLIPEGEIEDMKAAFQAHLNDEFEAAKEYK-P 560 Query: 354 DPAE 357 + A+ Sbjct: 561 NKAD 564 >gi|195159011|ref|XP_002020376.1| GL13542 [Drosophila persimilis] gi|194117145|gb|EDW39188.1| GL13542 [Drosophila persimilis] Length = 923 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 10/179 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG E N+A + + V +++I NNQ T R + S Sbjct: 330 LNVILHGDAAFAGQGINQECLNMAYVPHFEVGGSLHLIVNNQVGFTTPGDRGRSTAYTSD 389 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP--AN 294 S P V+G D A+ A Y R + I I++ +R GH+ + DP N Sbjct: 390 LAKSIQAPVFHVNGDDPEALARISKLAFRYQREFRKDIFIDLNCFRRWGHNELDDPTFTN 449 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +++ +S D Q RL + SE KE+ N K + + A S + P Sbjct: 450 PLVYQIVHQRQSVPDLYVQ---RLAKEEVLSESQAKEMRDNYMKYLGEELALAPSYQPP 505 >gi|148559123|ref|YP_001259747.1| 2-oxoglutarate dehydrogenase E1 component [Brucella ovis ATCC 25840] gi|166918818|sp|A5VSQ0|ODO1_BRUO2 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|148370380|gb|ABQ60359.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Brucella ovis ATCC 25840] Length = 1004 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 402 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 462 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 521 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ ++L+ ++ D+ ++ + R+ + E QS K P Sbjct: 522 SFTQPLMYKAIRAHKTTVQLYGEKLIAEGLVTQDDIDRMKADWRQKLEGEFEAGQSYK-P 580 Query: 354 DPAE 357 + A+ Sbjct: 581 NKAD 584 >gi|145295272|ref|YP_001138093.1| alpha-ketoglutarate decarboxylase [Corynebacterium glutamicum R] gi|140845192|dbj|BAF54191.1| hypothetical protein [Corynebacterium glutamicum R] Length = 1257 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A G V E+ N+A L +V I+++ NNQ T+ + + + Sbjct: 674 VPLLLHGDAAFAGLGIVPETINLAKLRGYDVGGTIHIVVNNQIGFTTTPDSSRSMHYATD 733 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +F P V+G D AV A Y R + I+++ YR RGH+ +D Sbjct: 734 YAKAFGCPVFHVNGDDPEAVVWVGQLATEYRRRFGKDVFIDLVCYRLRGHNEAD 787 >gi|81761002|sp|Q8NRC3|ODO1_CORGL RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|21323896|dbj|BAB98522.1| Pyruvate and 2-oxoglutarate dehydrogenases, E1 component [Corynebacterium glutamicum ATCC 13032] gi|41325355|emb|CAF19835.1| 2-OXOGLUTARATE DEHYDROGENASE [Corynebacterium glutamicum ATCC 13032] Length = 1257 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A G V E+ N+A L +V I+++ NNQ T+ + + + Sbjct: 674 VPLLLHGDAAFAGLGIVPETINLAKLRGYDVGGTIHIVVNNQIGFTTTPDSSRSMHYATD 733 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +F P V+G D AV A Y R + I+++ YR RGH+ +D Sbjct: 734 YAKAFGCPVFHVNGDDPEAVVWVGQLATEYRRRFGKDVFIDLVCYRLRGHNEAD 787 >gi|83950442|ref|ZP_00959175.1| 2-oxoglutarate dehydrogenase, E1 component [Roseovarius nubinhibens ISM] gi|83838341|gb|EAP77637.1| 2-oxoglutarate dehydrogenase, E1 component [Roseovarius nubinhibens ISM] Length = 986 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 11/224 (4%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF---GDGA-ANQGQ 196 G ++H+ T N H V LG A ++ SD+I V+ GD A A QG Sbjct: 346 GNTVHLSLTANP---SHLEAVNPVVLGKVRAKQDQNNDSDRISVLPILLHGDAAFAGQGV 402 Query: 197 VYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 V E F ++ L I+++ NNQ T+ + + + + P V+G D Sbjct: 403 VAECFGLSGLRGHKTGGTIHIVVNNQIGFTTAPHFSRSSPYPTDIALMVEAPIFHVNGDD 462 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 AV A+ + + K ++I+M+ YR GH+ D + +++ + Sbjct: 463 PEAVVHAARVAIEFRQRFKKDVVIDMICYRRFGHNEGDEPMFTNPVMYKKIKKQKTTLSL 522 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 L+ + EG++++++ + + + E A D P+ A+ Sbjct: 523 YTDVLIKDGLIPEGEIEDMKAAFQAFLADEFE-AGKDYRPNKAD 565 >gi|330805041|ref|XP_003290496.1| hypothetical protein DICPUDRAFT_56740 [Dictyostelium purpureum] gi|325079375|gb|EGC32978.1| hypothetical protein DICPUDRAFT_56740 [Dictyostelium purpureum] Length = 993 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/178 (20%), Positives = 85/178 (47%), Gaps = 8/178 (4%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 +AN + + V GD + A QG VYE+ +++ L + + I+++ NNQ T+ Sbjct: 369 YANDSSQKKSLAVQLHGDASVAGQGIVYETLHLSKLDHYSTGGTIHIVVNNQIGFTTNPY 428 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + + ++P V+G ++ AV A + + + + ++++ YR GH Sbjct: 429 CSRSSKYCTDVAKTIDVPVFHVNGDNVEAVVHVCKIAAEWRQKFQRDVFVDIVCYRKHGH 488 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + +D + +++ IE+ ++L++ K ++ E + ++ II+ S E Sbjct: 489 NETDQPKFTQPIMYDKIAKQIPIIEKYSQQLVNEKVLTQ----EQYLQIKNIIHESYE 542 >gi|282848902|ref|ZP_06258292.1| transketolase, thiamine diphosphate binding domain protein [Veillonella parvula ATCC 17745] gi|282581407|gb|EFB86800.1| transketolase, thiamine diphosphate binding domain protein [Veillonella parvula ATCC 17745] Length = 278 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 4/130 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K +D GDG +GQV+E+ A + L N+ ++ Sbjct: 121 GSLGQGISAACGMALAGKIDNADYRVYSILGDGELEEGQVWEAAMFAGFYKLNNLTAFVD 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + +++ + ++ +FN ++V+G D+ + ++ A A+ +GP Sbjct: 181 FNGLQIDGDITKVLSPLPIPEKFKAFNWNVIEVNGHDLDELHNAIETAKAFT---EGPTC 237 Query: 277 IEMLTYRYRG 286 I M T + +G Sbjct: 238 IVMHTVKGKG 247 >gi|146307526|ref|YP_001187991.1| alpha-ketoglutarate decarboxylase [Pseudomonas mendocina ymp] gi|145575727|gb|ABP85259.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas mendocina ymp] Length = 943 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 10/136 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 338 GSVRARQDRRNDATGDKVLPISIHGDAAFAGQGVVMETFQMSQTRGYKTGGTIHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS + T ++ P V+G D AV AV Y +K ++I+ Sbjct: 398 VGFTTSRPEDARSTEYATDVAKMIQAPIFHVNGDDPEAVLFVTQLAVDYRMQYKRDVVID 457 Query: 279 MLTYRYRGHSMSDPAN 294 ++ YR RGH+ +D N Sbjct: 458 LVCYRRRGHNEADEPN 473 >gi|260914173|ref|ZP_05920646.1| 2-oxoglutarate dehydrogenase [Pasteurella dagmatis ATCC 43325] gi|260631806|gb|EEX49984.1| 2-oxoglutarate dehydrogenase [Pasteurella dagmatis ATCC 43325] Length = 946 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 68/283 (24%), Positives = 114/283 (40%), Gaps = 28/283 (9%) Query: 87 GQEAVIVGMKMSLTEGDQ-------MITAYREHGHILA--CGVDASKIMAELTGRQGGIS 137 G +A I+ MK + G + M A+R ++L G S++ E G+ G Sbjct: 248 GSDAFILLMKEIIRHGKRNGIDEIAMGMAHRGRLNMLVNVLGKKPSELFDEFAGKHHGNG 307 Query: 138 KGK----GGSMHMFSTKNG-------FYGGHGIVGAQVSLGTGIAFA---NKYRRSDKIC 183 G G F T +G F H + + V +G+ A N + ++ + Sbjct: 308 TGDVKYHQGFSSDFMTDDGIVHLVLAFNPSHLEIVSPVVIGSVRARQKRINDHEKARVLP 367 Query: 184 VVCFGDGAA-NQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKR 238 V GD A QG V E+ N++ +V I V+ NNQ TS + T + + Sbjct: 368 VTVHGDSAVIGQGVVQETLNMSGTRGYSVGGTIRVVINNQIGFTTSNPNDTRSTEYCTDI 427 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 P + V+G D AV AV Y K I I++++YR GH+ +D + Sbjct: 428 AKMIEAPVIHVNGDDPEAVAYAARMAVEYRTLFKRDIFIDLVSYRRHGHNEADEPSATQP 487 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 + ++ + P + RL+ + D E+ N R ++ Sbjct: 488 LMYDRIKKHPTPRKVYADRLVAQGVIKDEDATELLNNYRDALD 530 >gi|260576567|ref|ZP_05844555.1| 2-oxoglutarate dehydrogenase, E1 subunit [Rhodobacter sp. SW2] gi|259021171|gb|EEW24479.1| 2-oxoglutarate dehydrogenase, E1 subunit [Rhodobacter sp. SW2] Length = 989 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 11/224 (4%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQ 196 G ++H+ T N H V LG A ++ SD+ + V+ GD A A QG Sbjct: 349 GNTVHLSLTANP---SHLEAVNPVVLGKVRAKQDQISDSDRHQVLPVLLHGDAAFAGQGV 405 Query: 197 VYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 V E F ++ L I+++ NNQ T+ S + + + + P V+G D Sbjct: 406 VAECFGLSGLKGHRTGGTIHIVVNNQIGFTTAPSFSRSSPYPTDIALMVEAPIFHVNGDD 465 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 AV A Y + +++++ YR GH+ D + ++ + ++ Sbjct: 466 PEAVVHAARVATEYRQRFHKDVVLDIFCYRRFGHNEGDEPMFTNPAMYTRIKKHKTTLQL 525 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 +RL+ + EG++++++ + +N E A + +P+ A+ Sbjct: 526 YTERLVADGLIPEGEIEDMKAAFQAKLNEEFE-AGKEYKPNRAD 568 >gi|258567766|ref|XP_002584627.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Uncinocarpus reesii 1704] gi|237906073|gb|EEP80474.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Uncinocarpus reesii 1704] Length = 1063 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 5/181 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + +++I NNQ T A + S Sbjct: 442 VLLHGDAAFAAQGVVYETMGFQSLPAYSTGGTVHIIVNNQIGFTTDPRFARSTPYCSDIA 501 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + P V+ D+ AV A + K ++I+++ YR +GH+ +D + Sbjct: 502 KAIEAPVFHVNADDVEAVNFVCQMAADWRAQFKSDVVIDIVCYRKQGHNETDQPAFTQPL 561 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 + +E+ +LL ++ D++E + V ++N+S + ++ D +P E Sbjct: 562 MYKRIADQTSQLEKYVDKLLSENSFTKEDIEEHKKWVWGMLNDSFDRSK-DYQPTSREWL 620 Query: 360 S 360 + Sbjct: 621 T 621 >gi|326432233|gb|EGD77803.1| 2-oxoglutarate dehydrogenase [Salpingoeca sp. ATCC 50818] Length = 1019 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 12/185 (6%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R I ++ GD A A QG VYES +A+L I++I NNQ T + + Sbjct: 405 RKKVIPILLHGDAAFAGQGVVYESLGLASLPAYTTGGTIHIIVNNQIGFTTDPRLSRSTP 464 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + P V+G D AV + A+ + + + ++++++ YR GH+ +D Sbjct: 465 YCTDVAKMLGAPIFHVNGDDPEAVVRCCELAMEWRQQYGTDVVVDIVCYRRHGHNEADQP 524 Query: 294 NYRTREEINEMRSNHDPIEQV-RKRLLH-----NKWASEGDLKEIEMNVRKIINNSVEFA 347 + T+ + E P Q+ RLL W E KE E + +N+ F Sbjct: 525 AF-TQPLMYERIGKQKPTPQLYANRLLEEGVVDQAWIDEV-AKEYEQRLATAFDNAPSFT 582 Query: 348 QSDKE 352 E Sbjct: 583 NVRPE 587 >gi|302671551|ref|YP_003831511.1| transketolase subunit A TktA2 [Butyrivibrio proteoclasticus B316] gi|302396024|gb|ADL34929.1| transketolase subunit A TktA2 [Butyrivibrio proteoclasticus B316] Length = 269 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 3/111 (2%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NV 211 F GG + A V++G I+ K+ R++K+ +V GDG +G ++ES IA+ + L N+ Sbjct: 112 FSGGSLGMAAPVAVGMAISI-KKHNRNNKVFLV-LGDGECEEGTIWESLMIASHYKLNNL 169 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 + +++NN+ VS + ++ ++ +F + VDG + + +D Sbjct: 170 VIIVDNNKLQSDGPVSLVAGIDDYREKFEAFGCSVVSVDGHNADEIADKLD 220 >gi|116327303|ref|YP_797023.1| transketolase, N-terminal subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332080|ref|YP_801798.1| transketolase, N-terminal subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120047|gb|ABJ78090.1| Transketolase, N-terminal subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125769|gb|ABJ77040.1| Transketolase, N-terminal subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 274 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL- 209 NG G +G +S+ G+A ++++ C DG +G +E+ A + L Sbjct: 109 NGIESSSGSLGQGLSVSVGLALGARFKKQSHKIYTCISDGECGEGMTWEAAQSATHYKLD 168 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 N+I ++ N + SK+ +SF ++ DG DI + + +KA + Sbjct: 169 NLIAFMDKNGIQIDGFTKDVMNLEPLSKKFLSFGWNVLEADGHDIEQIISAFEKA----K 224 Query: 270 AHKG-PIIIEMLTYRYRGHSM 289 HKG P II T +G S Sbjct: 225 LHKGSPTIILFDTILGKGVSF 245 >gi|154686345|ref|YP_001421506.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus amyloliquefaciens FZB42] gi|166918816|sp|A7Z5J9|ODO1_BACA2 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|154352196|gb|ABS74275.1| OdhA [Bacillus amyloliquefaciens FZB42] Length = 944 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 16/181 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A +G V E+ N+++L V I++I NN T + + S Sbjct: 356 LAILIHGDAAFPGEGIVAETLNLSSLKGYQVGGAIHIIANNMIGFTTESDESRSTKYASD 415 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 + IP + V+ D A + + AV Y + +I+++ YR GH+ M +P+ Sbjct: 416 LAKGYEIPIVHVNADDPEACLSAVKFAVEYRKRFNKDFLIDLIGYRRYGHNEMDEPST-- 473 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE-----IEMNVRKIINNSVEFAQSDK 351 T+ + + H + KR+ K SEG + E IE V K I ++ + + K Sbjct: 474 TQPMLYDAVRKHPTV----KRIFAEKLVSEGLISEEKAQNIETAVTKRIEDAYKKVPAKK 529 Query: 352 E 352 E Sbjct: 530 E 530 >gi|71734151|ref|YP_273518.1| transketolase, N-terminal subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554704|gb|AAZ33915.1| transketolase, N-terminal subunit, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|320329893|gb|EFW85881.1| transketolase, N-terminal subunit, putative [Pseudomonas syringae pv. glycinea str. race 4] Length = 282 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 90/226 (39%), Gaps = 11/226 (4%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 IRR + GQ+ G G VG G L + + E +Q Y GH A Sbjct: 20 IRRHALRMGQVQGQGYVGQALGAADLLAVSYFHALNYRPEDPEWEQRDRFYLSIGH-YAI 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FAN 174 + A+ I A++ + G S S + G I G + G GIA Sbjct: 79 ALYAALIEADIIPLDELETYGSDDSRLPMSGMATYTPGMEITGGSLGHGLGIAVGACLGL 138 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQ 232 K + S DG N+G +E+ A+ W L N+I +++ NNQ A G S S A Sbjct: 139 KRKNSRSFVYNLLSDGELNEGSTWEAAMSASHWKLDNLIAIVDVNNQQADGHS-SEVLAF 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 R +F +VDG D+ A+ A D A + A II + Sbjct: 198 EPIVDRWQAFGWFTQRVDGNDLNALVAAFDAARQHAGAQPRVIICD 243 >gi|257872629|ref|ZP_05652282.1| transketolase [Enterococcus casseliflavus EC10] gi|257876440|ref|ZP_05656093.1| transketolase [Enterococcus casseliflavus EC20] gi|257806793|gb|EEV35615.1| transketolase [Enterococcus casseliflavus EC10] gi|257810606|gb|EEV39426.1| transketolase [Enterococcus casseliflavus EC20] Length = 285 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 5/114 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G S+ GIA + D + GDG N+GQ +E+F A + LN I +I+ Sbjct: 120 GSLGQGTSMAAGIATGLRLAGKDNFVYLIVGDGELNEGQCWEAFQYIAHFKLNHCIVIID 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +N+ + + ++ +F +V G D++A+ D+A+ C+A Sbjct: 180 DNKKQLDGPTKDILDPFDIQQKMTAFGFYTEKVPGADMQAI----DEAIERCKA 229 >gi|229029032|ref|ZP_04185131.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus AH1271] gi|228732312|gb|EEL83195.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus AH1271] Length = 955 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRTLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|120400315|dbj|BAA12222.2| 2-oxoglutarate dehydrogenase [Corynebacterium glutamicum] Length = 1221 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A G V E+ N+A L +V I+++ NNQ T+ + + + Sbjct: 638 VPLLLHGDAAFAGLGIVPETINLAKLRGYDVGGTIHIVVNNQIGFTTTPDSSRSMHYATD 697 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +F P V+G D AV A Y R + I+++ YR RGH+ +D Sbjct: 698 YAKAFGCPVFHVNGDDPEAVVWVGQLATEYRRRFGKDVFIDLVCYRLRGHNEAD 751 >gi|24214285|ref|NP_711766.1| hypothetical protein LA_1585 [Leptospira interrogans serovar Lai str. 56601] gi|24195202|gb|AAN48784.1| transketolase N-terminal subunit [Leptospira interrogans serovar Lai str. 56601] Length = 264 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 7/110 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + +G G+A A K R+ + VV GDG N+G V+E+ AA L N+ +++ Sbjct: 110 GALGHGLPIGVGMAIAGKIRKKNYKVVVLTGDGEINEGSVWEAAMSAAKHKLSNLTVIVD 169 Query: 217 NNQ---YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 N+ Y + V + K SF +++DG +I +K+T+++ Sbjct: 170 YNKLQSYGLTKEVLDLEPLVDKWK---SFGFETVEIDGHNIAEIKSTLNR 216 >gi|194337045|ref|YP_002018839.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pelodictyon phaeoclathratiforme BU-1] gi|194309522|gb|ACF44222.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pelodictyon phaeoclathratiforme BU-1] Length = 942 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR D+ + ++ GD A + QG + E+ N+A ++++ NNQ Sbjct: 335 GAVKARQVRRGDRDGSQVLPILVHGDAAFSGQGVIMETLNLALTRGYGTGGTVHIVINNQ 394 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P + V+G D +V A+ Y +A K ++I+ Sbjct: 395 IGFTTSDPRDSRSTTYCTDVVKMIEAPVLHVNGDDPESVVLATQMALDYRQAFKRDVVID 454 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 455 IICFRKLGHNEQDTPA 470 >gi|330834268|ref|YP_004408996.1| transketolase subunit A [Metallosphaera cuprina Ar-4] gi|329566407|gb|AEB94512.1| transketolase subunit A [Metallosphaera cuprina Ar-4] Length = 273 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 9/134 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A K + V GDG ++G+++E+ A NL N++ +IE Sbjct: 124 GSLGQGLSFGIGVATGIKMSKGAGRVFVIMGDGEQDEGEIWEAMTHAIARNLDNLVAIIE 183 Query: 217 NNQYAMGTSVSRASAQTNFSK--RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 N + + + + + R V + + DG DI +V +T+D+A+ R P Sbjct: 184 MNGFQLDEATKDVKPKEFLPEVWRAVGWRV--FNCDGHDIASVISTIDEALKSKR----P 237 Query: 275 IIIEMLTYRYRGHS 288 +I T R +G + Sbjct: 238 AVIFAETRRGKGFT 251 >gi|161486709|ref|NP_600357.3| alpha-ketoglutarate decarboxylase [Corynebacterium glutamicum ATCC 13032] gi|161486720|ref|YP_225421.2| alpha-ketoglutarate decarboxylase [Corynebacterium glutamicum ATCC 13032] Length = 1221 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A G V E+ N+A L +V I+++ NNQ T+ + + + Sbjct: 638 VPLLLHGDAAFAGLGIVPETINLAKLRGYDVGGTIHIVVNNQIGFTTTPDSSRSMHYATD 697 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +F P V+G D AV A Y R + I+++ YR RGH+ +D Sbjct: 698 YAKAFGCPVFHVNGDDPEAVVWVGQLATEYRRRFGKDVFIDLVCYRLRGHNEAD 751 >gi|146337552|ref|YP_001202600.1| 2-oxoglutarate dehydrogenase E1 component [Bradyrhizobium sp. ORS278] gi|146190358|emb|CAL74354.1| 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex, thiamin-binding [Bradyrhizobium sp. ORS278] Length = 997 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 4/176 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E F ++ L I+ I NNQ T + + Sbjct: 395 RNSVLPLLMHGDAAFAGQGVVAECFALSDLKGYRTGGSIHFIVNNQIGFTTYPRYSRSSP 454 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV A + + P++I+M YR GH+ D Sbjct: 455 YPSDVAKMIDAPIFHVNGDDPEAVVFAAKVATEFRQKFHKPVVIDMFCYRRHGHNEGDEP 514 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 + ++ + +E KRL+ +EG++++ + + R ++ E S Sbjct: 515 AFTQPVMYKKIAGHPSTLEIYSKRLVAEGVMTEGEVEKAKADWRARLDAEFEAGTS 570 >gi|148556785|ref|YP_001264367.1| branched-chain alpha-keto acid dehydrogenase E1 component [Sphingomonas wittichii RW1] gi|148501975|gb|ABQ70229.1| branched-chain alpha-keto acid dehydrogenase E1 component [Sphingomonas wittichii RW1] Length = 735 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 14/161 (8%) Query: 160 VGAQVSLGTG--IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW------NLNV 211 VGA S+G I A++ D I + FGD +AN + N A W + + Sbjct: 158 VGAAFSIGVAARIGLADRPLAPDSIILCSFGDASANHSTAQGAINTAG-WAAYQGIPMPI 216 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 I+ E+N + T +F R + + DG+D+ T +A A R Sbjct: 217 IFACEDNGIGISTRTPSGWIAASFRNRPA---LAYLACDGLDLLDALCTAREAAAIARER 273 Query: 272 KGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPI 311 + P+ + M R GH+ SD + Y +R EI E + DP+ Sbjct: 274 RKPVFLHMGCTRLYGHAGSDVQSTYLSRTEIAESDAR-DPL 313 >gi|87199202|ref|YP_496459.1| alpha-ketoglutarate decarboxylase [Novosphingobium aromaticivorans DSM 12444] gi|87134883|gb|ABD25625.1| 2-oxoglutarate dehydrogenase E1 component [Novosphingobium aromaticivorans DSM 12444] Length = 950 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 8/125 (6%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRAS 230 R + V+ GD A A QG V+E F ++ + N I+ I NNQ TS SR S Sbjct: 343 RHKQVLPVLIHGDAAFAGQGIVWECFGLSGVKGYNTGGCIHFIINNQIGFTTSPQFSRGS 402 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + +GV P + V+G D AV A+ Y + I+++M YR GH+ Sbjct: 403 PYPSDVAKGV--QAPIIHVNGDDPEAVTFACKLAIDYRQKFGRDIVVDMWCYRRFGHNEG 460 Query: 291 DPANY 295 D ++ Sbjct: 461 DEPSF 465 >gi|327277105|ref|XP_003223306.1| PREDICTED: 2-oxoglutarate dehydrogenase-like, mitochondrial-like [Anolis carolinensis] Length = 1018 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + I+V+ NNQ Sbjct: 385 AEQFYRGDSEGKKVMSILLHGDAAFAGQGVVYETFHLSDLPSYTTNGTIHVVVNNQIGFT 444 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV + A + ++I+++ YR Sbjct: 445 TDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCNVAAEWRNTFNKDVVIDLVCYR 504 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 505 KRGHNEMDEP 514 >gi|296170147|ref|ZP_06851745.1| 2-oxoglutarate dehydrogenase E1 component [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895209|gb|EFG74923.1| 2-oxoglutarate dehydrogenase E1 component [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 1143 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L V I++I NNQ T+ + + + Sbjct: 554 VPMMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIIVNNQIGFTTAPEYSRSSEYCTD 613 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + ++I+M+ YR RGH SM++ Sbjct: 614 VAKMVGAPIFHVNGDDPEACVWVAKLAVDFRQEFNKDVVIDMICYRRRGHNEGDDPSMTN 673 Query: 292 PANY 295 PA Y Sbjct: 674 PAMY 677 >gi|304394256|ref|ZP_07376179.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Ahrensia sp. R2A130] gi|303293696|gb|EFL88073.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Ahrensia sp. R2A130] Length = 1001 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 6/177 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG V E ++ L I+VI NNQ T+ + + Sbjct: 389 RSTVLPLLLHGDAAFAGQGVVAECLGLSGLKGHITGGSIHVIVNNQIGFTTNPRFSRSSP 448 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A+ + + P++I+M YR GH+ D Sbjct: 449 YPSDVAKMIEAPIFHVNGDDPEAVTYAAKIAIEFRQKFGKPVVIDMFCYRRFGHNEGDEP 508 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 ++ +++ + + +RL EG + E+ R +++ EF +D Sbjct: 509 SFTQPIMYRKIKDHRSTLTLYGERLQKEGVIGEGAIDEMRAEFRAMVD--TEFDNAD 563 >gi|228938477|ref|ZP_04101086.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971356|ref|ZP_04131983.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977968|ref|ZP_04138348.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis Bt407] gi|228781756|gb|EEM29954.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis Bt407] gi|228788392|gb|EEM36344.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821214|gb|EEM67230.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 984 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 376 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 435 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 436 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRTLFKKDFLIDLIGYRRYGHNEMDDPA 495 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 496 --VTQPQVYKKIKNHPTVRAI 514 >gi|300870707|ref|YP_003785578.1| transketolase, N-terminal subunit [Brachyspira pilosicoli 95/1000] gi|300688406|gb|ADK31077.1| transketolase, N-terminal subunit [Brachyspira pilosicoli 95/1000] Length = 269 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 7/134 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRR-SDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G++G +++ G+A+A K S+KI +C GD ++GQ++E+ AA + L N++ +I Sbjct: 113 GLLGQGLAVAMGMAYARKLNNNSNKIFALC-GDAELHEGQIWETVQQAAHFKLDNLVAII 171 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGP 274 +NN + V+ + + SFN + V DG +++ V +DK + + P Sbjct: 172 DNNGLSSHDPVNEVINLGSLEDKFNSFNWNVITVKDGNNMKDVVEALDK---LDKLNGKP 228 Query: 275 IIIEMLTYRYRGHS 288 + I M T + +G S Sbjct: 229 VAIIMKTVKGKGVS 242 >gi|260555901|ref|ZP_05828121.1| transketolase [Acinetobacter baumannii ATCC 19606] gi|260410812|gb|EEX04110.1| transketolase [Acinetobacter baumannii ATCC 19606] Length = 283 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 9/124 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G K ++SD DG N+G +E+ A+ W L N+I +I+ Sbjct: 124 GSLGHGLGIAVGACLGLKQKKSDAFVYNLLSDGELNEGSTWEAVMSASHWKLDNLIAIID 183 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-- 273 NNQ A G S S A R SF +VDG D+ A+ D+A R H+G Sbjct: 184 VNNQQADGHS-SEILAFEPIIDRWQSFGWYTQRVDGNDMEALLEAFDQA----RNHEGAC 238 Query: 274 PIII 277 P +I Sbjct: 239 PRVI 242 >gi|254690067|ref|ZP_05153321.1| 2-oxoglutarate dehydrogenase E1 component [Brucella abortus bv. 6 str. 870] gi|254731098|ref|ZP_05189676.1| 2-oxoglutarate dehydrogenase E1 component [Brucella abortus bv. 4 str. 292] gi|256258320|ref|ZP_05463856.1| 2-oxoglutarate dehydrogenase E1 component [Brucella abortus bv. 9 str. C68] gi|260755603|ref|ZP_05867951.1| alpha-ketoglutarate dehydrogenase [Brucella abortus bv. 6 str. 870] gi|260758828|ref|ZP_05871176.1| alpha-ketoglutarate dehydrogenase [Brucella abortus bv. 4 str. 292] gi|260884629|ref|ZP_05896243.1| 2-oxoglutarate dehydrogenase E1 component [Brucella abortus bv. 9 str. C68] gi|297247165|ref|ZP_06930883.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Brucella abortus bv. 5 str. B3196] gi|260669146|gb|EEX56086.1| alpha-ketoglutarate dehydrogenase [Brucella abortus bv. 4 str. 292] gi|260675711|gb|EEX62532.1| alpha-ketoglutarate dehydrogenase [Brucella abortus bv. 6 str. 870] gi|260874157|gb|EEX81226.1| 2-oxoglutarate dehydrogenase E1 component [Brucella abortus bv. 9 str. C68] gi|297174334|gb|EFH33681.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Brucella abortus bv. 5 str. B3196] Length = 1004 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 402 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 462 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 521 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ ++L+ ++ D+ ++ + R+ + E QS K P Sbjct: 522 SFTQPLMYKAIRAHKTTVQLYGEKLIAEGLVTQDDIDRMKADWRQKLEGEFEAGQSYK-P 580 Query: 354 DPAE 357 + A+ Sbjct: 581 NKAD 584 >gi|62290777|ref|YP_222570.1| 2-oxoglutarate dehydrogenase E1 component [Brucella abortus bv. 1 str. 9-941] gi|82700689|ref|YP_415263.1| 2-oxoglutarate dehydrogenase E1 component [Brucella melitensis biovar Abortus 2308] gi|189024992|ref|YP_001935760.1| 2-oxoglutarate dehydrogenase E1 component [Brucella abortus S19] gi|237816285|ref|ZP_04595278.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella abortus str. 2308 A] gi|254696180|ref|ZP_05158008.1| 2-oxoglutarate dehydrogenase E1 component [Brucella abortus bv. 2 str. 86/8/59] gi|260546044|ref|ZP_05821784.1| dehydrogenase [Brucella abortus NCTC 8038] gi|260760552|ref|ZP_05872895.1| alpha-ketoglutarate dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] gi|75496190|sp|Q57AX5|ODO1_BRUAB RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|123546218|sp|Q2YLS2|ODO1_BRUA2 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|226738924|sp|B2S877|ODO1_BRUA1 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|62196909|gb|AAX75209.1| SucA, 2-oxoglutarate dehydrogenase, E1 component [Brucella abortus bv. 1 str. 9-941] gi|82616790|emb|CAJ11879.1| Dehydrogenase, E1 component:Transketolase, central region [Brucella melitensis biovar Abortus 2308] gi|189020564|gb|ACD73286.1| Dehydrogenase [Brucella abortus S19] gi|237788352|gb|EEP62567.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella abortus str. 2308 A] gi|260096151|gb|EEW80027.1| dehydrogenase [Brucella abortus NCTC 8038] gi|260670984|gb|EEX57805.1| alpha-ketoglutarate dehydrogenase [Brucella abortus bv. 2 str. 86/8/59] Length = 1004 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 402 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 462 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 521 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ ++L+ ++ D+ ++ + R+ + E QS K P Sbjct: 522 SFTQPLMYKAIRAHKTTVQLYGEKLIAEGLVTQDDIDRMKADWRQKLEGEFEAGQSYK-P 580 Query: 354 DPAE 357 + A+ Sbjct: 581 NKAD 584 >gi|58262862|ref|XP_568841.1| oxoglutarate dehydrogenase (succinyl-transferring) [Cryptococcus neoformans var. neoformans JEC21] gi|134108436|ref|XP_777169.1| hypothetical protein CNBB4000 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259854|gb|EAL22522.1| hypothetical protein CNBB4000 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223491|gb|AAW41534.1| oxoglutarate dehydrogenase (succinyl-transferring), putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1055 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 17/202 (8%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + V+ GD A A QG VYE+ + L N +++I NNQ T A + Sbjct: 435 SSAMGVLLHGDAAFAGQGVVYETMGMQNLPNYGTGGTVHLIVNNQIGFTTDPRFARSTPY 494 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S S + P V+ D+ AV A + K ++I+++ YR GH+ +D + Sbjct: 495 PSDIAKSIDAPIFHVNSDDVEAVNYVCTLAADWRATFKKDVVIDIVCYRRYGHNETDQPS 554 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV----RKIINNSVEFAQSD 350 + + ++ + +L+ +E ++ E V K + S ++ S Sbjct: 555 FTQPKMYKAIQKQPTVLSIYTDKLIKEGTFTEKEIDEHRQWVWGMLEKAYDGSRDYKPSP 614 Query: 351 KE---------PDPAELYSDIL 363 +E P P EL ++L Sbjct: 615 REWLSSSWEGFPSPKELAEEVL 636 >gi|198449378|ref|XP_001357568.2| GA13730 [Drosophila pseudoobscura pseudoobscura] gi|198130578|gb|EAL26702.2| GA13730 [Drosophila pseudoobscura pseudoobscura] Length = 923 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 10/179 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG E N+A + + V +++I NNQ T R + S Sbjct: 330 LNVILHGDAAFAGQGINQECLNMAYVPHFEVGGSLHLIVNNQVGFTTPGDRGRSTAYTSD 389 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP--AN 294 S P V+G D A+ A Y R + I I++ +R GH+ + DP N Sbjct: 390 LAKSIQAPVFHVNGDDPEALARISKLAFRYQREFRKDIFIDLNCFRRWGHNELDDPTFTN 449 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +++ +S D Q RL + SE KE+ N K + + A S + P Sbjct: 450 PLVYQIVHQRQSVPDLYVQ---RLAKEEVLSESQAKEMRDNYMKYLGEELALAPSYQPP 505 >gi|189183535|ref|YP_001937320.1| 2-oxoglutarate dehydrogenase E1 component [Orientia tsutsugamushi str. Ikeda] gi|189180306|dbj|BAG40086.1| 2-oxoglutarate dehydrogenase e1 component [Orientia tsutsugamushi str. Ikeda] Length = 963 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/182 (21%), Positives = 79/182 (43%), Gaps = 4/182 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A + QG V ES ++AL +++ I NNQ + Sbjct: 364 RKQVMGILIHGDAAFSGQGVVAESLLLSALKPYTAGGILHYIINNQIGFTANTDEIYPGQ 423 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 ++ + P V+G D +V A+AY + ++I+++ YR GH+ D Sbjct: 424 YTTEVAKTIKAPIFHVNGDDPESVLKVTSIAMAYRQKFAKDVVIDIICYRKYGHNEGDEP 483 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + N +++ E + L++ K+ E D ++++ + +N E A++ + Sbjct: 484 MFTQASMYNVIKNKVSVTELYAQNLVNQKFILESDYQDMKNQFKNFLNEQFELAKTYQPT 543 Query: 354 DP 355 P Sbjct: 544 LP 545 >gi|161521526|ref|YP_001584953.1| transketolase domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189352305|ref|YP_001947932.1| putative transketolase [Burkholderia multivorans ATCC 17616] gi|160345576|gb|ABX18661.1| Transketolase domain protein [Burkholderia multivorans ATCC 17616] gi|189336327|dbj|BAG45396.1| putative transketolase [Burkholderia multivorans ATCC 17616] Length = 281 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 3/135 (2%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + SD F DG ++G ++E AA Sbjct: 109 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRKGSDAFVYTLFSDGELDEGAIWEGLMSAA 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 W L N+I +++ NNQ A G S ++ A + +F +V+G DI AVK D Sbjct: 169 HWQLDNLIAIVDVNNQQADGPS-TQIMAFEPLVDKLEAFGWYVQRVNGNDIDAVKQAFDN 227 Query: 264 AVAYCRAHKGPIIIE 278 A + R I+ + Sbjct: 228 ARRHDRPQPRIIVCD 242 >gi|326938984|gb|AEA14880.1| alpha-ketoglutarate decarboxylase [Bacillus thuringiensis serovar chinensis CT-43] Length = 955 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRTLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|254713659|ref|ZP_05175470.1| 2-oxoglutarate dehydrogenase E1 component [Brucella ceti M644/93/1] gi|254715987|ref|ZP_05177798.1| 2-oxoglutarate dehydrogenase E1 component [Brucella ceti M13/05/1] gi|261217752|ref|ZP_05932033.1| 2-oxoglutarate dehydrogenase E1 component [Brucella ceti M13/05/1] gi|261321400|ref|ZP_05960597.1| 2-oxoglutarate dehydrogenase E1 component [Brucella ceti M644/93/1] gi|260922841|gb|EEX89409.1| 2-oxoglutarate dehydrogenase E1 component [Brucella ceti M13/05/1] gi|261294090|gb|EEX97586.1| 2-oxoglutarate dehydrogenase E1 component [Brucella ceti M644/93/1] Length = 1004 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 402 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 462 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 521 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ ++L+ ++ D+ ++ + R+ + E QS K P Sbjct: 522 SFTQPLMYKAIRAHKTTVQLYGEKLIAEGLVTQDDIDRMKADWRQKLEGEFEAGQSYK-P 580 Query: 354 DPAE 357 + A+ Sbjct: 581 NKAD 584 >gi|117618342|ref|YP_856458.1| 2-oxoglutarate dehydrogenase E1 component [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559749|gb|ABK36697.1| 2-oxoglutarate dehydrogenase, E1 component [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 958 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 26/200 (13%) Query: 115 ILACGVDASKIMAELTGRQGGISKGKGG-SMHM-----FSTKNG-------FYGGHGIVG 161 I G A + E G+ G S G G HM F+T G F H + Sbjct: 293 INVLGKRAQDLFDEFAGKHGE-SWGTGDVKYHMGFSSDFATPGGNVHLALAFNPSHLEIV 351 Query: 162 AQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---I 212 V +G+ A + RR DK + + GD A + QG V E+FN++ V + Sbjct: 352 NPVVIGSVRARMD--RRGDKDGSTVLPITIHGDSAMSGQGVVAETFNMSQTRAYGVGGTV 409 Query: 213 YVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 ++ NNQ TS R T + + + P + V+G D AV A+ Y Sbjct: 410 RIVINNQVGFTTSYHRDLRSTEYCTDIAKAVQAPVLHVNGDDPEAVVLVTQIALDYRNTF 469 Query: 272 KGPIIIEMLTYRYRGHSMSD 291 K ++IE++ YR GH+ +D Sbjct: 470 KRDVVIELVCYRRHGHNEAD 489 >gi|254700567|ref|ZP_05162395.1| 2-oxoglutarate dehydrogenase E1 component [Brucella suis bv. 5 str. 513] gi|261751072|ref|ZP_05994781.1| 2-oxoglutarate dehydrogenase E1 component [Brucella suis bv. 5 str. 513] gi|261740825|gb|EEY28751.1| 2-oxoglutarate dehydrogenase E1 component [Brucella suis bv. 5 str. 513] Length = 1004 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 402 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 462 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 521 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ ++L+ ++ D+ ++ + R+ + E QS K P Sbjct: 522 SFTQPLMYKAIRAHKTTVQLYGEKLIAEGLVTQDDIDRMKADWRQKLEGEFEAGQSYK-P 580 Query: 354 DPAE 357 + A+ Sbjct: 581 NKAD 584 >gi|254694555|ref|ZP_05156383.1| 2-oxoglutarate dehydrogenase E1 component [Brucella abortus bv. 3 str. Tulya] gi|261214876|ref|ZP_05929157.1| alpha-ketoglutarate dehydrogenase [Brucella abortus bv. 3 str. Tulya] gi|260916483|gb|EEX83344.1| alpha-ketoglutarate dehydrogenase [Brucella abortus bv. 3 str. Tulya] Length = 1004 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 402 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 462 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 521 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ ++L+ ++ D+ ++ + R+ + E QS K P Sbjct: 522 SFTQPLMYKAIRAHKTTVQLYGEKLIAEGLVTQDDIDRMKADWRQKLEGEFEAGQSYK-P 580 Query: 354 DPAE 357 + A+ Sbjct: 581 NKAD 584 >gi|229172006|ref|ZP_04299571.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus MM3] gi|228611349|gb|EEK68606.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus MM3] Length = 955 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRTLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|23502773|ref|NP_698900.1| 2-oxoglutarate dehydrogenase E1 component [Brucella suis 1330] gi|254707549|ref|ZP_05169377.1| 2-oxoglutarate dehydrogenase E1 component [Brucella pinnipedialis M163/99/10] gi|254708914|ref|ZP_05170725.1| 2-oxoglutarate dehydrogenase E1 component [Brucella pinnipedialis B2/94] gi|254717985|ref|ZP_05179796.1| 2-oxoglutarate dehydrogenase E1 component [Brucella sp. 83/13] gi|256030440|ref|ZP_05444054.1| 2-oxoglutarate dehydrogenase E1 component [Brucella pinnipedialis M292/94/1] gi|256059900|ref|ZP_05450086.1| 2-oxoglutarate dehydrogenase E1 component [Brucella neotomae 5K33] gi|261315033|ref|ZP_05954230.1| 2-oxoglutarate dehydrogenase E1 component [Brucella pinnipedialis M163/99/10] gi|261316410|ref|ZP_05955607.1| 2-oxoglutarate dehydrogenase E1 component [Brucella pinnipedialis B2/94] gi|261323870|ref|ZP_05963067.1| 2-oxoglutarate dehydrogenase E1 component [Brucella neotomae 5K33] gi|265982928|ref|ZP_06095663.1| 2-oxoglutarate dehydrogenase E1 component [Brucella sp. 83/13] gi|265987482|ref|ZP_06100039.1| 2-oxoglutarate dehydrogenase E1 component [Brucella pinnipedialis M292/94/1] gi|306839762|ref|ZP_07472563.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella sp. NF 2653] gi|306842926|ref|ZP_07475562.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella sp. BO2] gi|306843375|ref|ZP_07475976.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella sp. BO1] gi|81751983|sp|Q8FYF7|ODO1_BRUSU RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|23348793|gb|AAN30815.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella suis 1330] gi|261295633|gb|EEX99129.1| 2-oxoglutarate dehydrogenase E1 component [Brucella pinnipedialis B2/94] gi|261299850|gb|EEY03347.1| 2-oxoglutarate dehydrogenase E1 component [Brucella neotomae 5K33] gi|261304059|gb|EEY07556.1| 2-oxoglutarate dehydrogenase E1 component [Brucella pinnipedialis M163/99/10] gi|264659679|gb|EEZ29940.1| 2-oxoglutarate dehydrogenase E1 component [Brucella pinnipedialis M292/94/1] gi|264661520|gb|EEZ31781.1| 2-oxoglutarate dehydrogenase E1 component [Brucella sp. 83/13] gi|306276066|gb|EFM57766.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella sp. BO1] gi|306286949|gb|EFM58469.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella sp. BO2] gi|306405117|gb|EFM61395.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella sp. NF 2653] Length = 1004 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 402 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 462 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 521 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ ++L+ ++ D+ ++ + R+ + E QS K P Sbjct: 522 SFTQPLMYKAIRAHKTTVQLYGEKLIAEGLVTQDDIDRMKADWRQKLEGEFEAGQSYK-P 580 Query: 354 DPAE 357 + A+ Sbjct: 581 NKAD 584 >gi|325566991|ref|ZP_08143769.1| transketolase [Enterococcus casseliflavus ATCC 12755] gi|325159163|gb|EGC71308.1| transketolase [Enterococcus casseliflavus ATCC 12755] Length = 285 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 5/114 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G S+ GIA + D + GDG N+GQ +E+F A + LN I +I+ Sbjct: 120 GSLGQGTSMAAGIATGLRLAGKDNFVYLIVGDGELNEGQCWEAFQYIAHFKLNHCIVIID 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +N+ + + ++ +F +V G D++A+ D+A+ C+A Sbjct: 180 DNKKQLDGPTKDILDPFDIQQKMTAFGFYTEKVPGADMQAI----DEAIERCKA 229 >gi|221210927|ref|ZP_03583907.1| transketolase domain protein [Burkholderia multivorans CGD1] gi|221169883|gb|EEE02350.1| transketolase domain protein [Burkholderia multivorans CGD1] Length = 281 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 3/135 (2%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + SD F DG ++G ++E AA Sbjct: 109 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRKGSDAFVYTLFSDGELDEGAIWEGLMSAA 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 W L N+I +++ NNQ A G S ++ A + +F +V+G DI AVK D Sbjct: 169 HWQLDNLIAIVDVNNQQADGPS-TQIMAFEPLVDKLEAFGWYVQRVNGNDIDAVKQAFDN 227 Query: 264 AVAYCRAHKGPIIIE 278 A + R I+ + Sbjct: 228 ARRHDRPQPRIIVCD 242 >gi|294851166|ref|ZP_06791839.1| oxoglutarate dehydrogenase [Brucella sp. NVSL 07-0026] gi|294819755|gb|EFG36754.1| oxoglutarate dehydrogenase [Brucella sp. NVSL 07-0026] Length = 1004 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 402 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 462 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 521 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ ++L+ ++ D+ ++ + R+ + E QS K P Sbjct: 522 SFTQPLMYKAIRAHKTTVQLYGEKLIAEGLVTQDDIDRMKADWRQKLEGEFEAGQSYK-P 580 Query: 354 DPAE 357 + A+ Sbjct: 581 NKAD 584 >gi|161619841|ref|YP_001593728.1| alpha-ketoglutarate decarboxylase [Brucella canis ATCC 23365] gi|260567587|ref|ZP_05838057.1| 2-oxoglutarate dehydrogenase E1 component [Brucella suis bv. 4 str. 40] gi|189029257|sp|A9M8Q9|ODO1_BRUC2 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|161336652|gb|ABX62957.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella canis ATCC 23365] gi|260157105|gb|EEW92185.1| 2-oxoglutarate dehydrogenase E1 component [Brucella suis bv. 4 str. 40] Length = 1004 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 402 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 462 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 521 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ ++L+ ++ D+ ++ + R+ + E QS K P Sbjct: 522 SFTQPLMYKAIRAHKTTVQLYGEKLIAEGLVTQDDIDRMKADWRQKLEGEFEAGQSYK-P 580 Query: 354 DPAE 357 + A+ Sbjct: 581 NKAD 584 >gi|226365480|ref|YP_002783263.1| alpha-ketoglutarate decarboxylase [Rhodococcus opacus B4] gi|226243970|dbj|BAH54318.1| 2-oxoglutarate dehydrogenase E1 component [Rhodococcus opacus B4] Length = 1259 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 12/182 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L ++++ NNQ T+ + + + Sbjct: 675 LPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTVHIVVNNQVGFTTAPEHSRSSEYCTD 734 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + ++I+M+ YR RGH SM+ Sbjct: 735 VAKMIGAPIFHVNGDDPEACVWVAQLAVDFREKFQKDVVIDMICYRRRGHNEGDDPSMTQ 794 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 PA Y + +R ++ E + R + +E L++ + + ++ N E + Sbjct: 795 PAMYDVIDTKRSVRKSY--TESLIGRGDISLKEAEDALRDYQGQLERVFNEVRELEKYTP 852 Query: 352 EP 353 EP Sbjct: 853 EP 854 >gi|319409450|emb|CBI83099.1| alpha-ketoglutarate dehydrogenase [Bartonella schoenbuchensis R1] Length = 996 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 13/188 (6%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + V+ GD A A QG + E+F ++ L +V I+VI NNQ T+ + + + Sbjct: 393 RSKVMPVLIHGDAAFAGQGVLQETFGLSGLKGYSVAGSIHVIVNNQIGFTTNPRFSRSSS 452 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + + P++I+M YR GH+ D Sbjct: 453 YSSDIAKMIGAPIFHVNGDDPEAVVFAAKIATEFRQTFHKPVVIDMFCYRRYGHNEGDEP 512 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG--DLKEIEMNVRKIINN-SVEF-AQS 349 ++ T+ + + NH Q L ++ ++G L+EIE ++ + +EF A + Sbjct: 513 SF-TQPLMYKAIRNHKTTVQ----LYSDQLVAQGVVGLEEIERQKKEWRDKLEIEFEAGA 567 Query: 350 DKEPDPAE 357 PD A+ Sbjct: 568 SYNPDKAD 575 >gi|134100419|ref|YP_001106080.1| pyruvate dehydrogenase (acetyl-transferring) beta subunit [Saccharopolyspora erythraea NRRL 2338] gi|291007327|ref|ZP_06565300.1| pyruvate dehydrogenase (acetyl-transferring) beta subunit [Saccharopolyspora erythraea NRRL 2338] gi|133913042|emb|CAM03155.1| probable pyruvate dehydrogenase (acetyl-transferring) beta subunit [Saccharopolyspora erythraea NRRL 2338] Length = 729 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 19/173 (10%) Query: 160 VGAQVSLG--TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW-----NLNVI 212 VG SLG T + N++ D + V FGD +AN + N A + ++ Sbjct: 153 VGLAFSLGRATQLGVGNEWA-PDSVVVCSFGDASANHSTATGAINSALHCAHQGVPMPLL 211 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYCR 269 V E+N + + ++ + +R PG++ DG D +A + R Sbjct: 212 LVCEDNGIGISVRTPQGWIESTYGQR------PGLRYFTADGDDPLRCLDVAREAADWVR 265 Query: 270 AHKGPIIIEMLTYRYRGHSMSD-PANYRTREEINEMRSNHDPIEQVRKRLLHN 321 A++ P + + T R GH+ SD + YR R EI + DP+ K L+ + Sbjct: 266 ANRAPAFLHLRTVRLMGHAGSDVESGYRARSEI-VADYDRDPVLATAKTLVRH 317 >gi|256370325|ref|YP_003107836.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella microti CCM 4915] gi|256000488|gb|ACU48887.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella microti CCM 4915] Length = 1004 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 402 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 462 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 521 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ ++L+ ++ D+ ++ + R+ + E QS K P Sbjct: 522 SFTQPLMYKAIRAHKTTVQLYGEKLIAEGLVTQDDIDRMKADWRQKLEGEFEAGQSYK-P 580 Query: 354 DPAE 357 + A+ Sbjct: 581 NKAD 584 >gi|254704937|ref|ZP_05166765.1| 2-oxoglutarate dehydrogenase E1 component [Brucella suis bv. 3 str. 686] gi|261755634|ref|ZP_05999343.1| 2-oxoglutarate dehydrogenase E1 component [Brucella suis bv. 3 str. 686] gi|261745387|gb|EEY33313.1| 2-oxoglutarate dehydrogenase E1 component [Brucella suis bv. 3 str. 686] Length = 1004 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 402 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 462 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 521 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ ++L+ ++ D+ ++ + R+ + E QS K P Sbjct: 522 SFTQPLMYKAIRAHKTTVQLYGEKLIAEGLVTQDDIDRMKADWRQKLEGEFEAGQSYK-P 580 Query: 354 DPAE 357 + A+ Sbjct: 581 NKAD 584 >gi|17986424|ref|NP_539058.1| 2-oxoglutarate dehydrogenase E1 component [Brucella melitensis bv. 1 str. 16M] gi|225853361|ref|YP_002733594.1| 2-oxoglutarate dehydrogenase E1 component [Brucella melitensis ATCC 23457] gi|256045530|ref|ZP_05448413.1| 2-oxoglutarate dehydrogenase E1 component [Brucella melitensis bv. 1 str. Rev.1] gi|256112257|ref|ZP_05453178.1| 2-oxoglutarate dehydrogenase E1 component [Brucella melitensis bv. 3 str. Ether] gi|256263154|ref|ZP_05465686.1| 2-oxoglutarate dehydrogenase E1 component [Brucella melitensis bv. 2 str. 63/9] gi|260562840|ref|ZP_05833326.1| 2-oxoglutarate dehydrogenase E1 component [Brucella melitensis bv. 1 str. 16M] gi|265991954|ref|ZP_06104511.1| 2-oxoglutarate dehydrogenase E1 component [Brucella melitensis bv. 1 str. Rev.1] gi|265993686|ref|ZP_06106243.1| 2-oxoglutarate dehydrogenase E1 component [Brucella melitensis bv. 3 str. Ether] gi|81852547|sp|Q8YJE4|ODO1_BRUME RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|254772694|sp|C0RFG8|ODO1_BRUMB RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|17982019|gb|AAL51322.1| 2-oxoglutarate dehydrogenase e1 component [Brucella melitensis bv. 1 str. 16M] gi|225641726|gb|ACO01640.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella melitensis ATCC 23457] gi|260152856|gb|EEW87948.1| 2-oxoglutarate dehydrogenase E1 component [Brucella melitensis bv. 1 str. 16M] gi|262764667|gb|EEZ10588.1| 2-oxoglutarate dehydrogenase E1 component [Brucella melitensis bv. 3 str. Ether] gi|263003020|gb|EEZ15313.1| 2-oxoglutarate dehydrogenase E1 component [Brucella melitensis bv. 1 str. Rev.1] gi|263093059|gb|EEZ17209.1| 2-oxoglutarate dehydrogenase E1 component [Brucella melitensis bv. 2 str. 63/9] gi|326409925|gb|ADZ66990.1| 2-oxoglutarate dehydrogenase E1 component [Brucella melitensis M28] gi|326539639|gb|ADZ87854.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella melitensis M5-90] Length = 1004 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 402 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 462 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 521 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ ++L+ ++ D+ ++ + R+ + E QS K P Sbjct: 522 SFTQPLMYKAIRAHKTTVQLYGEKLIAEGLVTQDDIDRMKADWRQKLEGEFEAGQSYK-P 580 Query: 354 DPAE 357 + A+ Sbjct: 581 NKAD 584 >gi|50425085|ref|XP_461134.1| DEHA2F17798p [Debaryomyces hansenii CBS767] gi|49656803|emb|CAG89517.1| DEHA2F17798p [Debaryomyces hansenii] Length = 997 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 19/206 (9%) Query: 175 KYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRAS 230 +Y+++ + ++ GD A + QG VYE+ +A L + + I++I NNQ T A Sbjct: 377 EYKKA--MSILLHGDAAFSGQGVVYETMGLANLPDYSTGGTIHIIVNNQIGFTTDPRFAR 434 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + S S N P V+ D+ A + A + +II+++ YR GH+ + Sbjct: 435 STLYPSDIAKSINAPIFHVNADDVEANIFIFNLAAEWRATFHTDVIIDLVGYRKHGHNET 494 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV----EF 346 D + ++ I+ K+L+ ++ D+ E + V I++ S E+ Sbjct: 495 DQPAFTQPLMYQKIAEKKPVIDYYTKQLIEEGTFTKEDIDEHKKWVWNILDESFSKSKEY 554 Query: 347 AQSDKE---------PDPAELYSDIL 363 + +E P EL +++L Sbjct: 555 QSTSREWLTTAWEDFKSPKELATEVL 580 >gi|300704355|ref|YP_003745958.1| 2-oxoglutarate dehydrogenase e1 component [Ralstonia solanacearum CFBP2957] gi|299072019|emb|CBJ43351.1| 2-oxoglutarate dehydrogenase E1 component [Ralstonia solanacearum CFBP2957] Length = 953 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 11/132 (8%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A + RR DK + V GD A A QG V E+ N+A I+++ NNQ Sbjct: 343 ARQERRGDKTGEQVLAVQVHGDAAFAGQGVVMETLNLAQTRGYGTGGTIHIVINNQIGFT 402 Query: 224 TSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 TS R S T + V P + V+G D AV M A+ + K I ++++ + Sbjct: 403 TSDPRDSRSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAMQLAIDFRTEFKKDIAVDIICF 462 Query: 283 RYRGHSMSD-PA 293 R GH+ D PA Sbjct: 463 RKLGHNEQDTPA 474 >gi|254567720|ref|XP_002490970.1| Component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes a key step [Pichia pastoris GS115] gi|238030767|emb|CAY68690.1| Component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes a key step [Pichia pastoris GS115] gi|328352497|emb|CCA38896.1| 2-oxoglutarate dehydrogenase E1 component [Pichia pastoris CBS 7435] Length = 1001 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 4/116 (3%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYE+ AAL + I++I NNQ T A + S Sbjct: 386 ILVHGDAAFAGQGIVYETMGFAALPAYSTGGTIHIIINNQIGFTTDPRFARSTPYPSDIA 445 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 S N P + V+ D+ +V A + + +I++++ YR GH+ +D ++ Sbjct: 446 KSINAPILHVNADDVESVIFNFQLAAEWRQTFHSDVILDVVGYRKYGHNETDQPSF 501 >gi|255039484|ref|YP_003090105.1| 2-oxoglutarate dehydrogenase E1 component [Dyadobacter fermentans DSM 18053] gi|254952240|gb|ACT96940.1| 2-oxoglutarate dehydrogenase, E1 subunit [Dyadobacter fermentans DSM 18053] Length = 920 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 9/152 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAAL---WNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG VYE ++ L + I+ + NNQ T A + + Sbjct: 340 LPVLIHGDAAVAGQGIVYEVTQMSGLNGYYTGGTIHFVINNQVGFTTDFVDARSSIYCTD 399 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P + V+G D AV M AV Y + I I+M+ YR GH+ +D + Sbjct: 400 IAKIVDAPVLHVNGDDPEAVVYCMRLAVEYRQKFNKDIFIDMVCYRRHGHNEADEPKFTQ 459 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 + + +P E +K L A GD+ Sbjct: 460 PVLYKSIDKHQNPREIYQKTL-----AERGDV 486 >gi|296271970|ref|YP_003654601.1| deoxyxylulose-5-phosphate synthase [Arcobacter nitrofigilis DSM 7299] gi|296096145|gb|ADG92095.1| deoxyxylulose-5-phosphate synthase [Arcobacter nitrofigilis DSM 7299] Length = 600 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 49/187 (26%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +SL G A A K ++ D++ VV GDG+ G VYE+ N Sbjct: 96 SDADYFVAGHS--STSLSLAVGAAKAIKLKKEDRVPVVMIGDGSMTAGMVYEALNEIGDL 153 Query: 208 NLNVIYVIENNQYAMGTSVSRAS-----------------------------AQTNFSKR 238 L ++ ++ +N+ ++ + S T +KR Sbjct: 154 KLPMVIILNDNEMSIAKPIGAISKYLSKLLAGKYYQGFKTKVDKFIKNNMPEGTTYIAKR 213 Query: 239 ----------GVSFNIPGMQ----VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 G+ F G+ +DG DI+ V T++ A +A K P+I+ T + Sbjct: 214 MEEAMKLITPGILFEEMGVDYIGPIDGHDIKEVIETLEIA----KAMKKPVIVHAHTVKG 269 Query: 285 RGHSMSD 291 +G+ +++ Sbjct: 270 KGYKIAE 276 >gi|269797866|ref|YP_003311766.1| transketolase [Veillonella parvula DSM 2008] gi|269094495|gb|ACZ24486.1| Transketolase domain protein [Veillonella parvula DSM 2008] Length = 278 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 4/130 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K +D GDG +GQV+E+ A + L N+ ++ Sbjct: 121 GSLGQGISAACGMALAGKIDNADYRVYSILGDGELEEGQVWEAAMFAGFYKLNNLTAFVD 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + +++ + ++ +FN ++V+G D+ + ++ A A+ +GP Sbjct: 181 FNGLQIDGDITKVLSPLPIPEKFKAFNWNVIEVNGHDLDELHNAIETAKAFT---EGPTC 237 Query: 277 IEMLTYRYRG 286 I M T + +G Sbjct: 238 IIMHTVKGKG 247 >gi|321477068|gb|EFX88027.1| hypothetical protein DAPPUDRAFT_311540 [Daphnia pulex] Length = 921 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 +C+ GD A + QG V E+ + + + NV +++I NNQ T R + S Sbjct: 332 VCLQVHGDAAVSGQGVVQETLAFSQVPHFNVGGSLHLIVNNQVGYTTPADRGRSSRYCSD 391 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 S +P + V+G D AV A Y + + I +++L YR GH+ D + Sbjct: 392 VAKSIGVPVIHVNGGDPEAVVRAARLAWNYRKTFQRDIFVDVLCYRRWGHNEMDEPTF 449 >gi|317470961|ref|ZP_07930340.1| transketolase [Anaerostipes sp. 3_2_56FAA] gi|316901612|gb|EFV23547.1| transketolase [Anaerostipes sp. 3_2_56FAA] Length = 273 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 8/137 (5%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G +S G+A A K R+ C++ GDG + +GQ +E+ AA L N+ Sbjct: 119 GSLGQGLSAACGVALAKKLDERKERVYCII--GDGESQEGQNWEAAMFAAQNRLGNLTLF 176 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ++NN+ + + +F ++ SF ++V+G D RA+ + +A+ + + P Sbjct: 177 VDNNKKQLDNDTEKICDMEDFEEKFKSFGWHTVRVNGHDCRAIDDAVGQAI---QEQERP 233 Query: 275 IIIEMLTYRYRGHSMSD 291 + + T + +G ++ Sbjct: 234 TAVILDTLKGKGCKFAE 250 >gi|221101398|ref|XP_002170159.1| PREDICTED: similar to GI13269, partial [Hydra magnipapillata] Length = 380 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 4/171 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ +++ L N I+V+ NNQ T + + + Sbjct: 32 MSILLHGDAAFAGQGVVYETMHLSDLPNYTTHGTIHVVVNNQIGFTTDPRMSRSSPYCTD 91 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 P V+ D AV A Y ++I+++ YR GH+ SD ++ Sbjct: 92 VAKVVQCPIFHVNADDPEAVMHVCKVAAEYRAEFHKDVVIDLVCYRKNGHNESDNPDFTQ 151 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++R + + ++L+ +E + + + I+ + E A+ Sbjct: 152 PLMYQKIRQQEPCVLKYARKLISENVVTEEEFQSETLKYGLILEETFETAK 202 >gi|83748685|ref|ZP_00945702.1| 2-oxoglutarate dehydrogenase E1 component [Ralstonia solanacearum UW551] gi|207743382|ref|YP_002259774.1| oxoglutarate dehydrogenase protein [Ralstonia solanacearum IPO1609] gi|83724647|gb|EAP71808.1| 2-oxoglutarate dehydrogenase E1 component [Ralstonia solanacearum UW551] gi|206594779|emb|CAQ61706.1| oxoglutarate dehydrogenase protein [Ralstonia solanacearum IPO1609] Length = 953 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 11/132 (8%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A + RR DK + V GD A A QG V E+ N+A I+++ NNQ Sbjct: 343 ARQERRGDKTGEQVLAVQVHGDAAFAGQGVVMETLNLAQTRGYGTGGTIHIVINNQIGFT 402 Query: 224 TSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 TS R S T + V P + V+G D AV M A+ + K I ++++ + Sbjct: 403 TSDPRDSRSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAMQLAIDFRTEFKKDIAVDIICF 462 Query: 283 RYRGHSMSD-PA 293 R GH+ D PA Sbjct: 463 RKLGHNEQDTPA 474 >gi|297584335|ref|YP_003700115.1| 2-oxoglutarate dehydrogenase, E1 subunit [Bacillus selenitireducens MLS10] gi|297142792|gb|ADH99549.1| 2-oxoglutarate dehydrogenase, E1 subunit [Bacillus selenitireducens MLS10] Length = 953 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 39/217 (17%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A QG V E+ N++ L + I++I NN T + + T S Sbjct: 356 LPVLIHGDAAFPGQGVVAETINLSGLRGYSTGGTIHLIANNLLGFTTDSHDSRSTTYASD 415 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD------ 291 F++P + V+ D + + M+ A Y +A ++I+++ YR GH+ D Sbjct: 416 MARGFDVPVIHVNADDPESSLSAMNLAWKYRKAFGKDVVIDLIGYRRYGHNEMDEPLATQ 475 Query: 292 PANYR----------------------TREEINEMRSNH-DPIEQVRKRLLHNKWAS-EG 327 P+ Y+ T E++ +MR D + Q ++ NK + +G Sbjct: 476 PSLYKIIQKHPTVFELYGEKLRQESKVTDEQLRKMRKEFTDKLNQQFDKIKGNKRETIDG 535 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 D M+ ++ +S+E Q + PD E ++ L+ Sbjct: 536 D-----MSPPDVVTSSLERYQKNISPDSLEKVNEELL 567 >gi|149184349|ref|ZP_01862667.1| alpha-ketoglutarate decarboxylase [Erythrobacter sp. SD-21] gi|148831669|gb|EDL50102.1| alpha-ketoglutarate decarboxylase [Erythrobacter sp. SD-21] Length = 944 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 4/142 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V+E + + N ++ + NNQ TS A + S Sbjct: 341 LPVLLHGDAAFAGQGIVWECLGFSGVRGYNTGGCLHFVINNQIGFTTSPQFARSSPYPSD 400 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 P + V+G D AV A+ Y + I+I+M YR GH+ D + Sbjct: 401 VAKGVQAPILHVNGDDPEAVTFACKLAIEYRQKFGRDIVIDMWCYRRFGHNEGDEPKFTQ 460 Query: 298 REEINEMRSNHDPIEQVRKRLL 319 +E+R + E +RL+ Sbjct: 461 PLMYDEIRKHPKVSELYTQRLI 482 >gi|49479790|ref|YP_035493.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar konkukian str. 97-27] gi|81613904|sp|Q6HLS8|ODO1_BACHK RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|49331346|gb|AAT61992.1| 2-oxoglutarate dehydrogenase, E1 component (alpha-ketoglutarate dehydrogenase) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 955 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|224373123|ref|YP_002607495.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nautilia profundicola AmH] gi|223588578|gb|ACM92314.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nautilia profundicola AmH] Length = 604 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 101/257 (39%), Gaps = 57/257 (22%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +I+ M E D I +++ + H L G D + + G Sbjct: 31 GGHLSSTLGAVELIIAMHYVFDVEKDPFIFDVSHQAYAHKLLTGRWDEFDTLRQF----G 86 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 GIS G + S + F GH +S+ G A A K + ++I VV GDGA + Sbjct: 87 GIS---GYTKPSESKYDYFSAGHS--STSISVAVGAAKAIKLKGEERIPVVLIGDGAMSA 141 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA----------------------- 231 G VYE+ N V+ ++ +N+ ++G + S Sbjct: 142 GMVYEALNELGFRKYPVVIILNDNEMSIGKPIGALSKYLTRLKAGKLYQGFKEKFKKFLD 201 Query: 232 -------------QTNFSKRGVSFNIPGMQ----VDGMDIRAVKATMDKAVAYCRAHKGP 274 + FS GV F G++ +DG ++ V T++ A ++ K P Sbjct: 202 SAPKDVKYMAKKFEEMFSVHGVFFEEMGLEYIGPIDGHNLEEVIETLEVA----KSLKKP 257 Query: 275 IIIEMLTYRYRGHSMSD 291 +I+ T + +G+ ++ Sbjct: 258 VIVHAKTIKGKGYEQAE 274 >gi|207723220|ref|YP_002253619.1| oxoglutarate dehydrogenase protein [Ralstonia solanacearum MolK2] gi|206588416|emb|CAQ35379.1| oxoglutarate dehydrogenase protein [Ralstonia solanacearum MolK2] Length = 953 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 11/132 (8%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A + RR DK + V GD A A QG V E+ N+A I+++ NNQ Sbjct: 343 ARQERRGDKTGEQVLAVQVHGDAAFAGQGVVMETLNLAQTRGYGTGGTIHIVINNQIGFT 402 Query: 224 TSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 TS R S T + V P + V+G D AV M A+ + K I ++++ + Sbjct: 403 TSDPRDSRSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAMQLAIDFRTEFKKDIAVDIICF 462 Query: 283 RYRGHSMSD-PA 293 R GH+ D PA Sbjct: 463 RKLGHNEQDTPA 474 >gi|226357183|ref|YP_002786923.1| 2-oxoglutarate dehydrogenase E1 component [Deinococcus deserti VCD115] gi|226319173|gb|ACO47169.1| putative oxoglutarate dehydrogenase (succinyl-transferring) [Deinococcus deserti VCD115] Length = 945 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 27/178 (15%) Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA- 191 + GG MHM F H + + V G+ A + RR D + + GD A Sbjct: 296 RTPGGPMHM---ALAFNPSHLEIVSPVVHGS--VRARQDRRQDTERRQVLPITIHGDAAV 350 Query: 192 ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQ----TNFSKRGVSFNI 244 + QG V E+ N++ L I ++ NNQ S R + T+ +K G N Sbjct: 351 SGQGVVMETLNLSRLRGFATGGAIRIVINNQVGFTISDPRDTRSSRYCTDVAKIG---NA 407 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSDPANYR 296 P + V+G D AV D A+AY + I I+++ +R GH+ M+ P YR Sbjct: 408 PVLHVNGDDPEAVTFCGDLALAYRQEFGKDIFIDLICFRRNGHNEGDEPRMTQPIMYR 465 >gi|167768539|ref|ZP_02440592.1| hypothetical protein CLOSS21_03098 [Clostridium sp. SS2/1] gi|167710063|gb|EDS20642.1| hypothetical protein CLOSS21_03098 [Clostridium sp. SS2/1] Length = 273 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + D GDG +GQV+E+ A L N++ +++ Sbjct: 115 GSLGQGISAAVGMALAAKLQNKDYRTYTLLGDGEIQEGQVWEAAMFAGSRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN + + ++ + +FN +++DG D + A K C+ P Sbjct: 175 NNGLQIDGPIDEVNSPYPIGAKFEAFNFNVVEIDGHDFDQI-ADAFKQAKECKGK--PTA 231 Query: 277 IEMLTYRYRGHSM 289 I M T + +G S Sbjct: 232 IIMKTIKGKGVSF 244 >gi|47569192|ref|ZP_00239879.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus G9241] gi|47554164|gb|EAL12528.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus G9241] Length = 955 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|228944965|ref|ZP_04107326.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814634|gb|EEM60894.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 955 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|315658317|ref|ZP_07911189.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus lugdunensis M23590] gi|315496646|gb|EFU84969.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus lugdunensis M23590] Length = 935 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 7/180 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 I ++ GD A QG +E+ N++ L + +++I NN+ T + T S Sbjct: 352 IPIIIHGDAAYPGQGINFETMNLSNLHGYSTGGTLHIITNNRIGFTTEPIDGRSTTYSSD 411 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P + V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 412 VAKGYDVPILHVNADDVEATIEAIDIALEFRKEFHKDVVIDLVGYRRYGHNEMDEPSITN 471 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKIINNSVE-FAQSDKEPDP 355 + +R HD +E + K+L+ SE + E V K + + + ++DK DP Sbjct: 472 PVPYHNIRQ-HDSVELLYGKQLIDEGVISEDYMNETIERVHKEMRAAQDKIDKTDKMDDP 530 >gi|228913932|ref|ZP_04077557.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845871|gb|EEM90897.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 955 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|118476826|ref|YP_893977.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis str. Al Hakam] gi|118416051|gb|ABK84470.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis str. Al Hakam] Length = 982 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 374 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 433 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 434 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 493 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 494 --VTQPQVYKKIKNHPTVRAI 512 >gi|49476303|ref|YP_034344.1| alpha-ketoglutarate decarboxylase [Bartonella henselae str. Houston-1] gi|38489204|gb|AAR21286.1| 2-oxoglutarate dehydrogenase E1 component [Bartonella henselae] gi|49239111|emb|CAF28415.1| Alpha-ketoglutarate dehydrogenase [Bartonella henselae str. Houston-1] Length = 999 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 4/122 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG + E+F ++ L V I+ I NNQ T+ + + Sbjct: 396 RSKVLPLLIHGDAAFAGQGVIQETFGLSGLKGYRVAGSIHFIINNQIGFTTNPRFSRSSP 455 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV A + + P++I+M YR GH+ D Sbjct: 456 YPSDVAKMIDAPIFHVNGDDPEAVVFVAKLATEFRQIFHKPVVIDMFCYRRYGHNEGDEP 515 Query: 294 NY 295 ++ Sbjct: 516 SF 517 >gi|324325376|gb|ADY20636.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar finitimus YBT-020] Length = 955 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|317498705|ref|ZP_07956997.1| transketolase [Lachnospiraceae bacterium 5_1_63FAA] gi|316894047|gb|EFV16237.1| transketolase [Lachnospiraceae bacterium 5_1_63FAA] Length = 277 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + D GDG +GQV+E+ A L N++ +++ Sbjct: 119 GSLGQGISAAVGMALAAKLQNKDYRTYTLLGDGEIQEGQVWEAAMFAGSRKLDNLVVIVD 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN + + ++ + +FN +++DG D + A K C+ P Sbjct: 179 NNGLQIDGPIDEVNSPYPIGAKFEAFNFNVVEIDGHDFDQI-ADAFKQAKECKGK--PTA 235 Query: 277 IEMLTYRYRGHSM 289 I M T + +G S Sbjct: 236 IIMKTIKGKGVSF 248 >gi|229154927|ref|ZP_04283041.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus ATCC 4342] gi|228628485|gb|EEK85198.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus ATCC 4342] Length = 955 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|222628767|gb|EEE60899.1| hypothetical protein OsJ_14584 [Oryza sativa Japonica Group] Length = 999 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 3/145 (2%) Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 I+++ NNQ A T + + + + P V+G D+ AV + A + + Sbjct: 404 TIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALDAPIFHVNGDDLEAVVHVCELAAEWRQT 463 Query: 271 HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 ++++++ YR GH+ D ++ + +R++ +E + RLL + S+ D+ Sbjct: 464 FHSDVVVDIVCYRRFGHNEIDEPSFTQPKMYKIIRNHQSALEIYQNRLLESGKISKEDID 523 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDP 355 +++ V I+N+ EF Q+ KE P Sbjct: 524 KMQKKVSTILND--EF-QNSKEYIP 545 >gi|213156775|ref|YP_002318436.1| transketolase, alpha subunit [Acinetobacter baumannii AB0057] gi|215484310|ref|YP_002326539.1| Putative transketolase N-terminal section (TK) [Acinetobacter baumannii AB307-0294] gi|301345265|ref|ZP_07226006.1| Putative transketolase N-terminal section (TK) [Acinetobacter baumannii AB056] gi|301510434|ref|ZP_07235671.1| Putative transketolase N-terminal section (TK) [Acinetobacter baumannii AB058] gi|301594421|ref|ZP_07239429.1| Putative transketolase N-terminal section (TK) [Acinetobacter baumannii AB059] gi|332853708|ref|ZP_08434938.1| Transketolase, thiamine diphosphate binding domain protein [Acinetobacter baumannii 6013150] gi|332870887|ref|ZP_08439532.1| Transketolase, thiamine diphosphate binding domain protein [Acinetobacter baumannii 6013113] gi|213055935|gb|ACJ40837.1| transketolase, alpha subunit [Acinetobacter baumannii AB0057] gi|213988683|gb|ACJ58982.1| Putative transketolase N-terminal section (TK) [Acinetobacter baumannii AB307-0294] gi|332728532|gb|EGJ59906.1| Transketolase, thiamine diphosphate binding domain protein [Acinetobacter baumannii 6013150] gi|332731988|gb|EGJ63266.1| Transketolase, thiamine diphosphate binding domain protein [Acinetobacter baumannii 6013113] Length = 283 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 54/118 (45%), Gaps = 7/118 (5%) Query: 156 GHGIVGAQVSLGTGIA----FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G I G + G GIA K ++SD DG N+G +E+ A+ W L N Sbjct: 118 GMEITGGSLGHGLGIAVGACLGLKQKKSDAFVYNLLSDGELNEGSTWEAVMSASHWKLDN 177 Query: 211 VIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 +I +I+ NNQ A G S S A R SF +VDG D+ A+ D+A Y Sbjct: 178 LIAIIDVNNQQADGHS-SEILAFEPIVDRWQSFGWYTQRVDGNDMEALLEAFDQARNY 234 >gi|196035423|ref|ZP_03102828.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus W] gi|228926396|ref|ZP_04089468.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228932637|ref|ZP_04095512.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229120883|ref|ZP_04250125.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus 95/8201] gi|195992100|gb|EDX56063.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus W] gi|228662543|gb|EEL18141.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus 95/8201] gi|228827009|gb|EEM72768.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228833220|gb|EEM78785.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 955 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|34762820|ref|ZP_00143806.1| Transketolase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887522|gb|EAA24606.1| Transketolase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 223 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + V GDG +GQ++E+ AA + L N+ ++ Sbjct: 69 GSLGQGLSVANGMALNAKMFNENYRTYVILGDGEVQEGQIWEAAMTAAHYKLNNLCAFLD 128 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + +VS K+ +F +++DG D + + +DKA Sbjct: 129 NNNLQIDGNVSEIMGVEPLDKKWEAFGWNVIKIDGHDFEQILSALDKA 176 >gi|295107933|emb|CBL21886.1| Transketolase, N-terminal subunit [Ruminococcus obeum A2-162] Length = 279 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 7/135 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K GDG +GQV+E+ A L N++ +++ Sbjct: 115 GSLGQGISAAVGMALSAKLSNESYRVYTLLGDGEIQEGQVWEAAMFAGFRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + V + K+ +FN + V DG D+ +KA D+A + KG P Sbjct: 175 NNGLQIDGQVDEVCSPYPIDKKFEAFNFHVINVTDGNDMDQLKAAFDEA----KTVKGMP 230 Query: 275 IIIEMLTYRYRGHSM 289 I M T + +G S Sbjct: 231 TAIIMKTVKGKGVSF 245 >gi|218896295|ref|YP_002444706.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus G9842] gi|226738920|sp|B7IM94|ODO1_BACC2 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|218544140|gb|ACK96534.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus G9842] Length = 955 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|228964308|ref|ZP_04125427.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar sotto str. T04001] gi|228795405|gb|EEM42893.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar sotto str. T04001] Length = 934 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 326 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 385 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 386 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 445 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 446 --VTQPQVYKKIKNHPTVRAI 464 >gi|218902458|ref|YP_002450292.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus AH820] gi|226738919|sp|B7JEU9|ODO1_BACC0 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|218536196|gb|ACK88594.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus AH820] Length = 955 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|206977859|ref|ZP_03238748.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus H3081.97] gi|217958840|ref|YP_002337388.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus AH187] gi|222094986|ref|YP_002529046.1| 2-oxoglutarate dehydrogenase e1 component [Bacillus cereus Q1] gi|229138053|ref|ZP_04266651.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus BDRD-ST26] gi|229195561|ref|ZP_04322328.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus m1293] gi|226738922|sp|B7I0H2|ODO1_BACC7 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|254772693|sp|B9IU58|ODO1_BACCQ RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|206743956|gb|EDZ55374.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus H3081.97] gi|217063900|gb|ACJ78150.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus AH187] gi|221239044|gb|ACM11754.1| 2-oxoglutarate dehydrogenase, E1 component (alpha-ketoglutarate dehydrogenase) [Bacillus cereus Q1] gi|228587938|gb|EEK45989.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus m1293] gi|228645398|gb|EEL01632.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus BDRD-ST26] Length = 955 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|114764884|ref|ZP_01444066.1| 2-oxoglutarate dehydrogenase, E1 component [Pelagibaca bermudensis HTCC2601] gi|114542770|gb|EAU45793.1| 2-oxoglutarate dehydrogenase, E1 component [Roseovarius sp. HTCC2601] Length = 990 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + V+ GD A A QG V E F ++ L I+++ NNQ T+ + + Sbjct: 386 RTQVLPVLLHGDAAFAGQGVVAECFALSGLRGHRTGGTIHIVVNNQIGFTTAPHFSRSSP 445 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+G D AV A + + ++I+M YR GH+ D Sbjct: 446 YPTDNALVVEAPIFHVNGDDPEAVVHAAKVATEFRQKFGKDVVIDMFCYRRFGHNEGDEP 505 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +++ + +RL+ + EG++++++ + +N E ++ K P Sbjct: 506 MFTNPVMYKQIKKQKTTLTLYTERLVKDGLIPEGEIEDMKAAFQAHLNEEFEAGKTFK-P 564 Query: 354 DPAE 357 + A+ Sbjct: 565 NKAD 568 >gi|229078551|ref|ZP_04211110.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock4-2] gi|228704776|gb|EEL57203.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock4-2] Length = 955 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|154484860|ref|ZP_02027308.1| hypothetical protein EUBVEN_02578 [Eubacterium ventriosum ATCC 27560] gi|149733813|gb|EDM49932.1| hypothetical protein EUBVEN_02578 [Eubacterium ventriosum ATCC 27560] Length = 313 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 6/158 (3%) Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN--GFYGGHGIV 160 D+ + + ++ C + A+ ++E + + G +M M ++ GF G + Sbjct: 102 DRFFVSCCHYASVIYCALQATGRISEHAMDKFNVD---GWNMEMIGAEHSPGFENTAGSL 158 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQ 219 G +S+ G A A K R V GDG +GQ +E AA + L N++ V + N Sbjct: 159 GQTISIAGGTAHARKMRGDTGKVFVMLGDGELQEGQTWEFVESAAFYKLDNMVIVSDYNC 218 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 + + + +N + R +F ++ +G DI+A+ Sbjct: 219 QQVEGATDNQTCVSNMADRFNAFGAKCVECNGHDIQAI 256 >gi|67459484|ref|YP_247108.1| alpha-ketoglutarate decarboxylase [Rickettsia felis URRWXCal2] gi|67005017|gb|AAY61943.1| 2-oxoglutarate dehydrogenase E1 component [Rickettsia felis URRWXCal2] Length = 983 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L ++ ++ + NNQ + + +RAS Sbjct: 395 KRSKVKAILVHGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRAS 454 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV + AV Y + +++E++ YR GH+ Sbjct: 455 RYSTEFAKIIAA---PILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKYGHNE 511 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N ++S P Sbjct: 512 GDEPMYTQGKMYNIIKSKPTP 532 >gi|42780454|ref|NP_977701.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus ATCC 10987] gi|81569858|sp|Q73BN8|ODO1_BACC1 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|42736373|gb|AAS40309.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus ATCC 10987] Length = 955 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|251792222|ref|YP_003006943.1| 2-oxoglutarate dehydrogenase E1 component [Aggregatibacter aphrophilus NJ8700] gi|247533610|gb|ACS96856.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Aggregatibacter aphrophilus NJ8700] Length = 934 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 12/201 (5%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGAAN-QGQVYESFNIAA 205 F H + + V +G+ A + R+ DK + + GD A QG V E+ N++ Sbjct: 319 AFNPSHLEIVSPVVIGS--VRARQTRKQDKEHNKVLAITVHGDSAVTGQGIVQETLNMSN 376 Query: 206 LWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATM 261 V I ++ NNQ TS + T F + P + V+G D AV Sbjct: 377 ARGYKVGGTIRIVINNQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAA 436 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHN 321 AV Y K I I++++YR GH+ +D ++ + P + RL+ Sbjct: 437 RMAVEYRAVFKRDIFIDLISYRRHGHNEADEPLATQPMMYGIIKKHPTPPKVYANRLIQE 496 Query: 322 KWASEGDLKEIEMNVRKIINN 342 +E D EI R ++N Sbjct: 497 GVITEEDATEISNLYRDALDN 517 >gi|52144077|ref|YP_082751.1| alpha-ketoglutarate decarboxylase [Bacillus cereus E33L] gi|81688924|sp|Q63EB1|ODO1_BACCZ RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|51977546|gb|AAU19096.1| 2-oxoglutarate dehydrogenase, E1 component (alpha-ketoglutarate dehydrogenase) [Bacillus cereus E33L] Length = 955 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|229108819|ref|ZP_04238424.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock1-15] gi|229149563|ref|ZP_04277795.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus m1550] gi|228633909|gb|EEK90506.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus m1550] gi|228674588|gb|EEL29827.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock1-15] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|229160317|ref|ZP_04288316.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus R309803] gi|228623278|gb|EEK80105.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus R309803] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|301052900|ref|YP_003791111.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis CI] gi|300375069|gb|ADK03973.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus biovar anthracis str. CI] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|261492655|ref|ZP_05989208.1| 2-oxoglutarate dehydrogenase E1 component [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494596|ref|ZP_05991077.1| 2-oxoglutarate dehydrogenase E1 component [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309708|gb|EEY10930.1| 2-oxoglutarate dehydrogenase E1 component [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311814|gb|EEY12964.1| 2-oxoglutarate dehydrogenase E1 component [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 937 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 8/148 (5%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALW 207 F H + + V +G+ A + R ++ + V GD A A QG V E+ N+A Sbjct: 320 AFNPSHLEIVSPVVIGSVRARQERMRDTEHEKVLAVTVHGDSAVAGQGVVQETLNMANAR 379 Query: 208 NLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDK 263 V I ++ NNQ TS + T F + P + V+G D AV Sbjct: 380 GYKVGGTIRIVINNQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAARM 439 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 AV Y K I I++++YR GH+ +D Sbjct: 440 AVEYRTKFKRDIFIDLISYRRHGHNEAD 467 >gi|322417858|ref|YP_004197081.1| transketolase domain-containing protein [Geobacter sp. M18] gi|320124245|gb|ADW11805.1| Transketolase domain-containing protein [Geobacter sp. M18] Length = 274 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 7/142 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + GDG +GQ++E+ AA + N+ +I+ Sbjct: 117 GSLGQGLSMANGMALGLKLDGKENRVYAVLGDGELQEGQIWEAAMAAAHYKSDNLCALID 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + VS+ + S++ +F +++DG D+ + A +D A +HKG P Sbjct: 177 SNGLQIDGDVSKVMNVASISEKFKAFGWNVIEIDGHDMAQIVAALDHA----ESHKGAPT 232 Query: 276 IIEMLTYRYRG-HSMSDPANYR 296 I T + +G H + A+Y Sbjct: 233 AIVARTVKGKGVHLFENKASYH 254 >gi|223043201|ref|ZP_03613248.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus capitis SK14] gi|222443412|gb|EEE49510.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus capitis SK14] Length = 934 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/162 (20%), Positives = 79/162 (48%), Gaps = 6/162 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ +L +++I NN+ T + + T + Sbjct: 352 MPIIIHGDAAYPGQGINFETMNLGSLKGYTTGGSLHIITNNRIGFTTEPTDGRSTTYSTD 411 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P + V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 412 VAKGYDVPILHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRYGHNEMDEPSITN 471 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRK 338 + +R H+ +E + K+L+ + SE ++ ++ +V+K Sbjct: 472 PVPYHNIRK-HESVELLYGKKLVEDGIISEDEMNDVIDSVQK 512 >gi|196040609|ref|ZP_03107908.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus NVH0597-99] gi|229090315|ref|ZP_04221559.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock3-42] gi|196028399|gb|EDX67007.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus NVH0597-99] gi|228693009|gb|EEL46726.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus Rock3-42] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|167634402|ref|ZP_02392723.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. A0442] gi|254740318|ref|ZP_05198009.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus anthracis str. Kruger B] gi|167530290|gb|EDR93016.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. A0442] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|75761306|ref|ZP_00741284.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228899940|ref|ZP_04064181.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis IBL 4222] gi|74491198|gb|EAO54436.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228859719|gb|EEN04138.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis IBL 4222] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|315129122|gb|EFT85117.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp. aureus CGS03] Length = 722 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 12/188 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKII---NNSVEFAQSDKEP 353 +R HD +E V K+L++ SE ++ V+K + ++ + A P Sbjct: 469 PVPYQNIRK-HDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKMDNP 527 Query: 354 D---PAEL 358 D PAEL Sbjct: 528 DMEKPAEL 535 >gi|303232595|ref|ZP_07319281.1| transketolase, thiamine diphosphate binding domain protein [Atopobium vaginae PB189-T1-4] gi|302481382|gb|EFL44456.1| transketolase, thiamine diphosphate binding domain protein [Atopobium vaginae PB189-T1-4] Length = 318 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S+ GIA+A + D + GDG N+GQ +E+F A L N I I+ Sbjct: 118 GSLGQGTSVAAGIAYALHLQHKDNYTYLIVGDGELNEGQCWEAFEFIAAHRLSNCIVFID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN+ + +++++ +F V+G D A+ + +A Sbjct: 178 NNKKQLDGRCEDILYPFDYTEKMKAFGFMAQCVNGQDAEALDCAIQRA 225 >gi|256845835|ref|ZP_05551293.1| transketolase [Fusobacterium sp. 3_1_36A2] gi|256719394|gb|EEU32949.1| transketolase [Fusobacterium sp. 3_1_36A2] Length = 270 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + V GDG +GQ++E+ AA + L N+ ++ Sbjct: 116 GSLGQGLSVANGMALNAKMFNENYRTYVILGDGEVQEGQIWEAAMTAAHYKLNNLCAFLD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + +VS K+ +F +++DG D + + +DKA Sbjct: 176 NNNLQIDGNVSEIMGVEPLDKKWEAFGWNVIKIDGHDFEQILSALDKA 223 >gi|228951740|ref|ZP_04113841.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807935|gb|EEM54453.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|194905042|ref|XP_001981110.1| GG11794 [Drosophila erecta] gi|190655748|gb|EDV52980.1| GG11794 [Drosophila erecta] Length = 919 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 5/117 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GDGA A QG E N+A + + V +++I NNQ T R + S Sbjct: 326 LNVILHGDGAFAGQGVNQECLNMAYVPHFEVGGSVHLIVNNQVGFTTPGDRGRSTAYPSD 385 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S P V+G D AV + A Y R + I I++ +R GH+ + DP Sbjct: 386 LAKSIQAPVFHVNGCDPEAVARITNLAFRYQREFRKDIFIDLNCFRRWGHNELDDPT 442 >gi|148284802|ref|YP_001248892.1| alpha-ketoglutarate decarboxylase [Orientia tsutsugamushi str. Boryong] gi|146740241|emb|CAM80571.1| 2-oxoglutarate dehydrogenase, E1 component [Orientia tsutsugamushi str. Boryong] Length = 963 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 80/183 (43%), Gaps = 4/183 (2%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQ 232 R + ++ GD A + QG V ES ++AL +++ I NNQ + Sbjct: 363 ERKQVMGILIHGDAAFSGQGVVAESLLLSALKPYAAGGILHYIINNQIGFTANTDEIYPG 422 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 ++ + P V+G D +V A+AY + ++I+++ YR GH+ D Sbjct: 423 QYTTEVAKTIKAPIFHVNGDDPESVLKITAIAMAYRQKFAKDVVIDIICYRKYGHNEGDE 482 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 + N +++ E ++L++ K+ E D ++++ + +N E A++ + Sbjct: 483 PMFTQASMYNVIKNKVSVTELYAQKLINQKFILESDYQDMKNQFKNFLNEQFEIAKTYQP 542 Query: 353 PDP 355 P Sbjct: 543 TLP 545 >gi|145257753|ref|XP_001401841.1| 2-oxoglutarate dehydrogenase [Aspergillus niger CBS 513.88] gi|134058755|emb|CAK38739.1| unnamed protein product [Aspergillus niger] Length = 1055 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 5/181 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I+++ NNQ T A + S Sbjct: 432 VLLHGDAAFAAQGIVYETMGFHSLPAYSTGGTIHIVVNNQIGFTTDPRFARSTPYCSDIA 491 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 S + P V+ D+ AV A + K ++I+++ YR +GH+ +D ++ Sbjct: 492 KSIDAPVFHVNADDVEAVNYVCQVAADWRAEFKRDVVIDIVCYRKQGHNETDQPSFTQPL 551 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 + +++ +L+ ++ D+ E + V ++N+S + ++ D +P E Sbjct: 552 MYKRIAQQKSQLDKYVNKLIEEGTFTKEDIDEHKKWVWGMLNDSFDRSK-DYQPTSKEWL 610 Query: 360 S 360 + Sbjct: 611 T 611 >gi|159039598|ref|YP_001538851.1| alpha-ketoglutarate decarboxylase [Salinispora arenicola CNS-205] gi|157918433|gb|ABV99860.1| 2-oxoglutarate dehydrogenase, E1 subunit [Salinispora arenicola CNS-205] Length = 1237 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 14/127 (11%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRASAQTNF 235 + + GD A A QG V E+ N++ L ++V+ NNQ T+ SR+S + Sbjct: 657 LPLAVHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHVVVNNQVGFTTAPEYSRSSLYSTD 716 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SM 289 R + P V+G D AV A Y + ++I+++ YR RGH SM Sbjct: 717 VARMI--QAPIFHVNGDDPEAVVRVAQLAFEYRQTFNKDVVIDLVCYRRRGHNEGDDPSM 774 Query: 290 SDPANYR 296 S+P YR Sbjct: 775 SNPEMYR 781 >gi|30261365|ref|NP_843742.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus anthracis str. Ames] gi|47526537|ref|YP_017886.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus anthracis str. 'Ames Ancestor'] gi|49184195|ref|YP_027447.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus anthracis str. Sterne] gi|65318631|ref|ZP_00391590.1| COG0567: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Bacillus anthracis str. A2012] gi|165870304|ref|ZP_02214959.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. A0488] gi|167639384|ref|ZP_02397656.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. A0193] gi|170686829|ref|ZP_02878049.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. A0465] gi|170706228|ref|ZP_02896689.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. A0389] gi|177651569|ref|ZP_02934358.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. A0174] gi|190568755|ref|ZP_03021659.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis Tsiankovskii-I] gi|227815896|ref|YP_002815905.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. CDC 684] gi|229602983|ref|YP_002865784.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. A0248] gi|254682577|ref|ZP_05146438.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus anthracis str. CNEVA-9066] gi|254726238|ref|ZP_05188020.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus anthracis str. A1055] gi|254733995|ref|ZP_05191709.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus anthracis str. Western North America USA6153] gi|254753705|ref|ZP_05205740.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus anthracis str. Vollum] gi|254758801|ref|ZP_05210828.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus anthracis str. Australia 94] gi|81583023|sp|Q81TK1|ODO1_BACAN RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|254772690|sp|C3P487|ODO1_BACAA RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|254772691|sp|C3LAU3|ODO1_BACAC RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|30255219|gb|AAP25228.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. Ames] gi|47501685|gb|AAT30361.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. 'Ames Ancestor'] gi|49178122|gb|AAT53498.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. Sterne] gi|164713799|gb|EDR19321.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. A0488] gi|167512823|gb|EDR88197.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. A0193] gi|170128762|gb|EDS97628.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. A0389] gi|170669352|gb|EDT20095.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. A0465] gi|172082847|gb|EDT67910.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. A0174] gi|190560171|gb|EDV14152.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis Tsiankovskii-I] gi|227005516|gb|ACP15259.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. CDC 684] gi|229267391|gb|ACQ49028.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus anthracis str. A0248] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|229143967|ref|ZP_04272384.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus BDRD-ST24] gi|228639530|gb|EEK95943.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus BDRD-ST24] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|229189447|ref|ZP_04316464.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus ATCC 10876] gi|228594038|gb|EEK51840.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus ATCC 10876] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|169796834|ref|YP_001714627.1| putative transketolase N-terminal section [Acinetobacter baumannii AYE] gi|169149761|emb|CAM87652.1| putative transketolase N-terminal section [Acinetobacter baumannii AYE] Length = 283 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 54/118 (45%), Gaps = 7/118 (5%) Query: 156 GHGIVGAQVSLGTGIA----FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G I G + G GIA K ++SD DG N+G +E+ A+ W L N Sbjct: 118 GMEITGGSLGHGLGIAVGACLGLKQKKSDAFVYNLLSDGELNEGSTWEAVMSASHWKLDN 177 Query: 211 VIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 +I +I+ NNQ A G S S A R SF +VDG D+ A+ D+A Y Sbjct: 178 LIAIIDVNNQQADGHS-SENLAFEPIVDRWQSFGWYTQRVDGNDMEALLEAFDQARNY 234 >gi|206967800|ref|ZP_03228756.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus AH1134] gi|229177772|ref|ZP_04305146.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus 172560W] gi|206736720|gb|EDZ53867.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus AH1134] gi|228605736|gb|EEK63183.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus 172560W] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|220921134|ref|YP_002496435.1| 2-oxoglutarate dehydrogenase E1 component [Methylobacterium nodulans ORS 2060] gi|219945740|gb|ACL56132.1| 2-oxoglutarate dehydrogenase, E1 subunit [Methylobacterium nodulans ORS 2060] Length = 985 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 76/188 (40%), Gaps = 15/188 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 +R+ + ++ GD A A QG V E ++ L I+ I NNQ T + + Sbjct: 381 QRTTVLPLLIHGDAAFAGQGVVAECLGLSGLKGHRTGGSIHFIINNQIGFTTDPRFSRSS 440 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 S P +G D AV A Y + P++I+ML YR GH+ D Sbjct: 441 PYPSDVAKMVEAPIFHCNGDDPEAVVFAAKVATEYRQKFHKPVVIDMLCYRRFGHNEGDE 500 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS-DK 351 + + +R + +E KRL+ G +KE E+ RK EF + D Sbjct: 501 PAFTQPKMYQIIRKHPSTLEIYGKRLI-----EAGAVKEAELEARK-----AEFRTTLDS 550 Query: 352 EPDPAELY 359 E D A Y Sbjct: 551 EFDVANAY 558 >gi|68250264|ref|YP_249376.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae 86-028NP] gi|68058463|gb|AAX88716.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae 86-028NP] Length = 950 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 360 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 419 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV T AV Y K I I++++YR GH+ Sbjct: 420 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFTARMAVEYRNLFKRDIFIDLISYRRHGHN 479 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 480 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 539 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 540 EWREMDTAKM 549 >gi|294784982|ref|ZP_06750270.1| transketolase, N- subunit [Fusobacterium sp. 3_1_27] gi|294486696|gb|EFG34058.1| transketolase, N- subunit [Fusobacterium sp. 3_1_27] Length = 270 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + V GDG +GQ++E+ AA + L N+ ++ Sbjct: 116 GSLGQGLSVANGMALNAKMFNENYRTYVILGDGEVQEGQIWEAAMTAAHYKLNNLCAFLD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + +VS K+ +F +++DG D + + +DKA Sbjct: 176 NNNLQIDGNVSEIMGVEPLDKKWEAFGWNVIKIDGHDFEQILSALDKA 223 >gi|291541650|emb|CBL14760.1| Transketolase, N-terminal subunit [Ruminococcus bromii L2-63] Length = 282 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K GDG +GQV+E+ AA L N++ +++ Sbjct: 118 GSLGQGISAACGMALAAKLDNKSYRTYTVLGDGEVEEGQVWEAAMFAAHNKLDNLVVIVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + +V + K+ SF +++DG D +++ ++KA Sbjct: 178 QNGLQIDGTVEEVAGIEPLDKKFESFGFEVIKIDGHDFNQIESALEKA 225 >gi|228906994|ref|ZP_04070861.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis IBL 200] gi|228852742|gb|EEM97529.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis IBL 200] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|324998133|ref|ZP_08119245.1| alpha-ketoglutarate decarboxylase [Pseudonocardia sp. P1] Length = 1294 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N+A L ++V+ NNQ T+ + + + Sbjct: 703 LPVLMHGDAAFAGQGVVAETLNLALLRGYRTGGTVHVVVNNQVGFTTAPEHSRSSQYCTD 762 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV Y ++I+M+ YR RGH SM+ Sbjct: 763 VAKMIGAPVFHVNGDDPEACVWVAKLAVEYRERWNNDVVIDMICYRRRGHNEGDDPSMTQ 822 Query: 292 PANY 295 P+ Y Sbjct: 823 PSMY 826 >gi|307103505|gb|EFN51764.1| hypothetical protein CHLNCDRAFT_59788 [Chlorella variabilis] Length = 720 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 37/210 (17%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 +QGG+S G + S + F GH +LG + K R+++ + V+ GDGA Sbjct: 164 QQGGLS---GFTKRSESPYDPFGAGHSSTSISAALGMAVGRDVKGRKNNVVAVI--GDGA 218 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQY----------------AMGTSVSRASAQTNF 235 G YE+ N A + N+I ++ +NQ A+ ++++R A Sbjct: 219 ITGGMAYEAMNHAGFLDTNMIVILNDNQQVSLPTQYNGKNQEPVGALSSTLARLQANRQL 278 Query: 236 SK-----RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + +GV+ +PG+ I+ A +D+ + G + E L + Y G Sbjct: 279 RELREIAKGVTKQLPGV------IQNATAKIDEYARGMISGTGSTLFEELGFYYIG---- 328 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLH 320 P + +++ ++ S E V LLH Sbjct: 329 -PVDGHNLQDLIDVLSEIKTTETVGPVLLH 357 >gi|296501946|ref|YP_003663646.1| alpha-ketoglutarate decarboxylase [Bacillus thuringiensis BMB171] gi|296322998|gb|ADH05926.1| alpha-ketoglutarate decarboxylase [Bacillus thuringiensis BMB171] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|229068915|ref|ZP_04202209.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus F65185] gi|228714199|gb|EEL66080.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus F65185] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|196046463|ref|ZP_03113688.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus 03BB108] gi|225863208|ref|YP_002748586.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus 03BB102] gi|254772692|sp|C1ELG5|ODO1_BACC3 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|196022647|gb|EDX61329.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus 03BB108] gi|225786169|gb|ACO26386.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus 03BB102] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|30019405|ref|NP_831036.1| alpha-ketoglutarate decarboxylase [Bacillus cereus ATCC 14579] gi|229126667|ref|ZP_04255679.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus BDRD-Cer4] gi|81580742|sp|Q81GF2|ODO1_BACCR RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|29894949|gb|AAP08237.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus ATCC 14579] gi|228656607|gb|EEL12433.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus BDRD-Cer4] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|228957633|ref|ZP_04119383.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802082|gb|EEM48949.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar pakistani str. T13001] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|300858216|ref|YP_003783199.1| 2-oxoglutarate dehydrogenase E1 component [Corynebacterium pseudotuberculosis FRC41] gi|300685670|gb|ADK28592.1| 2-oxoglutarate dehydrogenase E1 component [Corynebacterium pseudotuberculosis FRC41] gi|302330494|gb|ADL20688.1| Putative alpha-ketoglutarate decarboxylase [Corynebacterium pseudotuberculosis 1002] Length = 1228 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 10/125 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A G V E+ N+A L V ++++ NNQ T+ A + + Sbjct: 641 MPIMLHGDAAFAGLGIVQETLNLAQLRGYTVGGTVHIVVNNQIGFTTTPDSARSSHYATD 700 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 ++ P V+G D AV A Y + I+M++YR RGH SM+ Sbjct: 701 LAKAYGCPVFHVNGDDPEAVVWVGKLATEYRHEFGKDVFIDMISYRRRGHNEADDPSMTQ 760 Query: 292 PANYR 296 P Y+ Sbjct: 761 PEMYK 765 >gi|228920079|ref|ZP_04083428.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839535|gb|EEM84827.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|229183558|ref|ZP_04310782.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus BGSC 6E1] gi|228599968|gb|EEK57564.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus BGSC 6E1] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|56695259|ref|YP_165607.1| 2-oxoglutarate dehydrogenase E1 component [Ruegeria pomeroyi DSS-3] gi|56676996|gb|AAV93662.1| 2-oxoglutarate dehydrogenase, E1 component [Ruegeria pomeroyi DSS-3] Length = 985 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/224 (20%), Positives = 98/224 (43%), Gaps = 11/224 (4%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQ 196 G ++H+ T N H V LG A +++ D+ + V+ GD A A QG Sbjct: 345 GNTVHLSLTANP---SHLEAVNPVVLGKARAKQDQFGDKDRTSVMPVLLHGDAAFAGQGV 401 Query: 197 VYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 V E F ++ + ++++ NNQ T+ + + + + P V+G D Sbjct: 402 VAECFQLSGIRGHRTGGTMHIVVNNQIGFTTAPHFSRSSPYPTDIALMVEAPIFHVNGDD 461 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 AV A + + + +++++ YR GH+ D + +++S+ + Sbjct: 462 PEAVVHAAKVATEFRQKFRKDVVLDIFCYRRFGHNEGDEPMFTNPIMYKKIKSHKTTLAL 521 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 +RL+ + EG++++++ + +N E A D +P+ A+ Sbjct: 522 YTERLVRDGLIPEGEIEDMKAAFQAHLNEEFE-AGKDYKPNKAD 564 >gi|228984434|ref|ZP_04144612.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775300|gb|EEM23688.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|229043104|ref|ZP_04190832.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus AH676] gi|228726243|gb|EEL77472.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus AH676] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|187934347|ref|YP_001886590.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum B str. Eklund 17B] gi|229813269|sp|B2TRM5|DXS_CLOBB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|187722500|gb|ACD23721.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum B str. Eklund 17B] Length = 619 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/223 (21%), Positives = 84/223 (37%), Gaps = 65/223 (29%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF---------YGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ G ++ F +GF Y G +S G G+A A ++ Sbjct: 82 LTGRKDGFK-----NLRQFDGLSGFPKRNESKYDYFDTGHSSTSISAGLGMARARDLKKE 136 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V GDGA G E+ N ++ ++ +NQ ++ +V S N + G Sbjct: 137 KYTVVSVIGDGALTGGMALEALNDVGFRKTKMVIILNDNQMSISLNVGGLSRYLNKLRMG 196 Query: 240 VSFN----------------------------------IPGM-----------QVDGMDI 254 ++N +P M +DG DI Sbjct: 197 ETYNRLKTNINTSLGSSDLGKDIISKMSKVKDSIKQLVVPSMFFENMGVKYIGPIDGHDI 256 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD--PANY 295 +A M++ + + +GP+II +T + RG+S+++ P+ Y Sbjct: 257 KA----MNEVFSKVKDVEGPVIIHTVTQKGRGYSLAEKSPSKY 295 >gi|314933596|ref|ZP_07840961.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus caprae C87] gi|313653746|gb|EFS17503.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus caprae C87] Length = 934 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/162 (20%), Positives = 79/162 (48%), Gaps = 6/162 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ +L +++I NN+ T + + T + Sbjct: 352 MPIIIHGDAAYPGQGINFETMNLGSLKGYTTGGSLHIITNNRIGFTTEPTDGRSTTYSTD 411 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P + V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 412 VAKGYDVPILHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRYGHNEMDEPSITN 471 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRK 338 + +R H+ +E + K+L+ + SE ++ ++ +V+K Sbjct: 472 PVPYHNIRK-HESVELLYGKKLVEDGIISEDEMNDVIDSVQK 512 >gi|218232802|ref|YP_002366046.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus B4264] gi|226738921|sp|B7HH19|ODO1_BACC4 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|218160759|gb|ACK60751.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus cereus B4264] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|148887157|sp|Q4UKI8|ODO1_RICFE RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase Length = 977 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L ++ ++ + NNQ + + +RAS Sbjct: 389 KRSKVKAILVHGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRAS 448 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV + AV Y + +++E++ YR GH+ Sbjct: 449 RYSTEFAKIIAA---PILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKYGHNE 505 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N ++S P Sbjct: 506 GDEPMYTQGKMYNIIKSKPTP 526 >gi|258507400|ref|YP_003170151.1| transketolase [Lactobacillus rhamnosus GG] gi|257147327|emb|CAR86300.1| Transketolase [Lactobacillus rhamnosus GG] gi|259648756|dbj|BAI40918.1| putative transketolase [Lactobacillus rhamnosus GG] Length = 285 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 89/223 (39%), Gaps = 27/223 (12%) Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA----YREH 112 +L IR K+ QL G G +GG + AV+ G +M+ D + Sbjct: 11 KLAAKIRYGAIKSIQLAGQGHIGGSLSVA-DLLAVLYGKQMNFRPSDPHWASRDWLVLSK 69 Query: 113 GH--------ILACGVDASKIMAELTGRQGGISKGKGGSM---HMFSTKN-GFYGGHGIV 160 GH + A G K++ L +GG++ H K G G + Sbjct: 70 GHAGPALYSALAATGFIDYKVLETLN---------RGGTILPSHPDRNKTPGVDATTGSL 120 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQ 219 G S GIA K RR + GDG N+GQ +E+F A L N I I+NN+ Sbjct: 121 GQGTSQAAGIATGLKQRRLSSYVYLIVGDGELNEGQCWEAFQYIASNKLNNCIVFIDNNK 180 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 + Q + S++ +F + V+G ++ + A +D Sbjct: 181 KQLDGWTDDIIRQFDISEKMRAFGFTTLHVNGSNVEEIDAAID 223 >gi|305681741|ref|ZP_07404545.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Corynebacterium matruchotii ATCC 14266] gi|305658214|gb|EFM47717.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Corynebacterium matruchotii ATCC 14266] Length = 1254 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A G V E+ N+A L V ++++ NNQ T+ + + Sbjct: 663 MPLLLHGDAAFAGLGIVPETINLAQLRGYTVGGTVHIVVNNQIGFTTTPDSGRSSHYATD 722 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +F P V+G D AV A Y R + I+M+ YR RGH+ +D Sbjct: 723 LAKAFGCPVFHVNGDDPEAVVWVGKLATEYRRRFGKDVFIDMIAYRRRGHNEAD 776 >gi|163843946|ref|YP_001628350.1| alpha-ketoglutarate decarboxylase [Brucella suis ATCC 23445] gi|189029258|sp|B0CIS7|ODO1_BRUSI RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|163674669|gb|ABY38780.1| 2-oxoglutarate dehydrogenase, E1 component [Brucella suis ATCC 23445] Length = 1004 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 402 RPKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 462 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 521 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ ++L+ ++ D+ ++ + R+ + E QS K P Sbjct: 522 SFTQPLMYKAIRAHKTTVQLYGEKLIAEGLVTQDDIDRMKADWRQKLEGEFEAGQSYK-P 580 Query: 354 DPAE 357 + A+ Sbjct: 581 NKAD 584 >gi|296282621|ref|ZP_06860619.1| 2-oxoglutarate dehydrogenase E1 component [Citromicrobium bathyomarinum JL354] Length = 952 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 6/119 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V+E+ + + + N VI+ + NNQ TS A S Sbjct: 341 LPVLIHGDAAFAGQGIVWETLSFSGIPGYNTGGVIHFVINNQIGFTTSPRFARNSPYPSD 400 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRGHSMSDPANY 295 P + V+G D AV AV Y R H G I+I+M YR GH+ D ++ Sbjct: 401 VAKGVQAPILHVNGDDPEAVTFACKLAVEY-RQHFGRDIVIDMWCYRRFGHNEGDEPSF 458 >gi|254786522|ref|YP_003073951.1| 2-oxoglutarate dehydrogenase E1 component [Teredinibacter turnerae T7901] gi|237683525|gb|ACR10789.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Teredinibacter turnerae T7901] Length = 945 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 15/161 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG MH+ F H + + V G+ A + RR D+ + VV GD A A Q Sbjct: 316 GGEMHL---ALAFNPSHLEIVSPVVQGS--VRARQDRRDDQRGNMVVPVVIHGDAAFAGQ 370 Query: 195 GQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS-FNIPGMQVD 250 G V E+F ++ A ++++ NNQ TS S T ++ P V+ Sbjct: 371 GVVMETFQMSQTRAYRTGGTVHLVINNQVGFTTSRQDDSRSTTYATDVAKMIEAPIFHVN 430 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 D AV + A Y + ++I+++ YR RGH+ +D Sbjct: 431 ADDPEAVVFVTNLAADYRNEFRKDVVIDLVCYRRRGHNETD 471 >gi|330503174|ref|YP_004380043.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas mendocina NK-01] gi|328917460|gb|AEB58291.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas mendocina NK-01] Length = 943 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 10/136 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RRSD + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 338 GSVRARQDRRSDASGDKVLPISIHGDAAFAGQGVVMETFQMSQTRGYKTGGTIHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S + + T ++ P V+G D AV AV Y +K ++I+ Sbjct: 398 VGFTISNPQDARSTEYATDVAKMIQAPIFHVNGDDPEAVLFVTQLAVDYRMQYKRDVVID 457 Query: 279 MLTYRYRGHSMSDPAN 294 ++ YR RGH+ +D N Sbjct: 458 LVCYRRRGHNEADEPN 473 >gi|254501855|ref|ZP_05114006.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii DFL-11] gi|222437926|gb|EEE44605.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii DFL-11] Length = 619 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 20/145 (13%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G A A D V GDGA G YE FN A N +I ++ +N ++ Sbjct: 118 ISAGLGFAVARDLEGKDGHVVCVIGDGAMTAGMAYEGFNNAGHLNSRMIVILNDNNMSIS 177 Query: 224 TSVSRASAQTN--------------FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 S N F G +++ P VDG DI + AT+ Sbjct: 178 PPTGALSDHLNTLAQSDTVQRERSFFENMGFAYHGP---VDGHDIPTLLATLRH---LKE 231 Query: 270 AHKGPIIIEMLTYRYRGHSMSDPAN 294 GP+++ +T + G+ ++ A+ Sbjct: 232 EGTGPVVLHAITRKGAGYVHAEAAS 256 >gi|83944436|ref|ZP_00956890.1| 2-oxoglutarate dehydrogenase, E1 component [Sulfitobacter sp. EE-36] gi|83844759|gb|EAP82642.1| 2-oxoglutarate dehydrogenase, E1 component [Sulfitobacter sp. EE-36] Length = 987 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/176 (20%), Positives = 77/176 (43%), Gaps = 4/176 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R+ + ++ GD A A QG V E F ++ L ++++ NNQ T+ + Sbjct: 379 NDKERTSVMPILLHGDAAFAGQGVVAECFALSGLRGHRTGGTMHIVVNNQIGFTTAPHFS 438 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D AV A + + K ++I+++ YR GH+ Sbjct: 439 RSSPYPTDNALVVEAPIFHVNGDDPEAVVHAARVATEFRQKFKKDVVIDLICYRRFGHNE 498 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 D + +++ + +RL+ + EG++++++ ++ +N E Sbjct: 499 GDEPMFTNPVMYKKIKKQKTTLTLYTERLVKDGLIPEGEIEDMKAAFQEKMNTEFE 554 >gi|317470752|ref|ZP_07930137.1| transketolase [Anaerostipes sp. 3_2_56FAA] gi|316901887|gb|EFV23816.1| transketolase [Anaerostipes sp. 3_2_56FAA] Length = 273 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 13/158 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + D GDG +GQV+E+ A L N++ +++ Sbjct: 115 GSLGQGISAAVGMAVAAKLKGKDYRTYTLLGDGEIQEGQVWEAAMSAGFRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN + ++ + + +FN + +DG + + + KA C+ P Sbjct: 175 NNGLQIDGNIDDVCSPYPIDAKFEAFNFNVINIDGHNFDEIADALKKA-KECKGK--PTA 231 Query: 277 IEMLTYRYRGHSM---------SDPANYRTREEINEMR 305 I M T + +G S S P + + + +NE+ Sbjct: 232 IIMKTVKGKGVSFMENQVGWHGSAPNDEQCEQALNELE 269 >gi|304311197|ref|YP_003810795.1| 2-oxoglutarate dehydrogenase, E1 subunit [gamma proteobacterium HdN1] gi|301796930|emb|CBL45143.1| 2-oxoglutarate dehydrogenase, E1 subunit [gamma proteobacterium HdN1] Length = 947 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR DK + ++ GD A A QG V E+ ++ +++I NNQ Sbjct: 339 GSVRARQDRRKDKTGDLVVPIIIHGDAAFAGQGVVMETLQMSQTRGYRTGGTVHIIVNNQ 398 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS + + T + + P V+G D AV A+ + + K ++I+ Sbjct: 399 IGFTTSNPKDARSTEYCTDVAKMVQAPIFHVNGDDPEAVLFVTQMAIDFRQQFKRDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ YR RGH+ +D PA Sbjct: 459 LICYRVRGHNEADEPA 474 >gi|167746343|ref|ZP_02418470.1| hypothetical protein ANACAC_01052 [Anaerostipes caccae DSM 14662] gi|167654336|gb|EDR98465.1| hypothetical protein ANACAC_01052 [Anaerostipes caccae DSM 14662] Length = 273 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 15/159 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + D GDG +GQV+E+ A L N++ +++ Sbjct: 115 GSLGQGISAAVGMAVAAKLQGKDYRTYTLLGDGEIQEGQVWEAAMSAGFRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + V + + +FN + +DG + + + KA R KG P Sbjct: 175 NNGLQIDGKVDDVCSPYPIDAKFEAFNFNVINIDGHNFDEIADALKKA----RECKGKPT 230 Query: 276 IIEMLTYRYRGHSM---------SDPANYRTREEINEMR 305 I M T + +G S S P + + + +NE+ Sbjct: 231 AIIMKTVKGKGVSFMENQVGWHGSAPNDEQCEQALNELE 269 >gi|291302596|ref|YP_003513874.1| 2-oxoglutarate dehydrogenase E1 subunit [Stackebrandtia nassauensis DSM 44728] gi|290571816|gb|ADD44781.1| 2-oxoglutarate dehydrogenase, E1 subunit [Stackebrandtia nassauensis DSM 44728] Length = 1225 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 14/127 (11%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRASAQTNF 235 + ++ GD A A QG V E+ N++ L ++VI NNQ T+ SR+S + Sbjct: 643 LPLMVHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHVIINNQVGFTTAPEYSRSSLYSTD 702 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SM 289 R + P V+G D AV A Y +A ++++M+ YR RGH SM Sbjct: 703 VARMI--QAPIFHVNGDDPEAVVRVAKLAFEYRQAFNKDVVVDMICYRRRGHNEGDDPSM 760 Query: 290 SDPANYR 296 ++P Y+ Sbjct: 761 TNPLMYQ 767 >gi|40003|emb|CAA38576.1| oxoglutarate dehydrogenase (NADP+) [Bacillus subtilis subsp. subtilis str. 168] Length = 937 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 4/178 (2%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 + + ++ GD A +G V E+ N+++L V I++I NN T + + + Sbjct: 352 TKSLAILIHGDAAFPGEGIVAETLNLSSLKGYQVGGAIHIIANNMIGFTTESAESRSTKY 411 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S + IP + V+ D A + + AV Y + +I+++ YR GH+ D + Sbjct: 412 ASDLAKGYEIPIVHVNADDPEACLSAVKFAVEYRKTFNKDFLIDLIGYRRYGHNEMDEPS 471 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 + +R + + K+L+ +E ++ IE +V K I +++ S KE Sbjct: 472 TTQPMLYDAVRKHPTSNKFSLKKLVKEGVVTEEVVQNIEKSVTKRIEVAIQKVPSKKE 529 >gi|225022870|ref|ZP_03712062.1| hypothetical protein CORMATOL_02916 [Corynebacterium matruchotii ATCC 33806] gi|224944093|gb|EEG25302.1| hypothetical protein CORMATOL_02916 [Corynebacterium matruchotii ATCC 33806] Length = 1260 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A G V E+ N+A L V ++++ NNQ T+ + + Sbjct: 669 MPLLLHGDAAFAGLGIVPETINLAQLRGYTVGGTVHIVVNNQIGFTTTPDSGRSSHYATD 728 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +F P V+G D AV A Y R + I+M+ YR RGH+ +D Sbjct: 729 LAKAFGCPVFHVNGDDPEAVVWVGKLATEYRRRFGKDVFIDMIAYRRRGHNEAD 782 >gi|167747216|ref|ZP_02419343.1| hypothetical protein ANACAC_01930 [Anaerostipes caccae DSM 14662] gi|167653194|gb|EDR97323.1| hypothetical protein ANACAC_01930 [Anaerostipes caccae DSM 14662] Length = 291 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 8/137 (5%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G +S G+A A K R+ C++ GDG + +GQ +E+ AA L N+ Sbjct: 137 GSLGQGLSAACGVALAKKLDERKERVYCII--GDGESQEGQNWEAAMFAAQNRLGNLTLF 194 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ++NN+ + + +F ++ SF ++V+G D RA+ + +A+ + + P Sbjct: 195 VDNNKKQLDNDTEKICDMEDFEEKFKSFGWHTVRVNGHDCRAIDDAVGQAI---QEQERP 251 Query: 275 IIIEMLTYRYRGHSMSD 291 + + T + +G ++ Sbjct: 252 TAVILDTLKGKGCKFAE 268 >gi|313893731|ref|ZP_07827298.1| Transketolase, thiamine diphosphate binding domain protein [Veillonella sp. oral taxon 158 str. F0412] gi|313441745|gb|EFR60170.1| Transketolase, thiamine diphosphate binding domain protein [Veillonella sp. oral taxon 158 str. F0412] Length = 278 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 4/130 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K +D GDG +GQV+E+ A + L N+ ++ Sbjct: 121 GSLGQGISAACGMALAGKIDNADYRVYSILGDGELEEGQVWEAAMFAGHYKLNNLTAFVD 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + +++ + ++ +FN ++V+G D+ + ++ A A+ +GP Sbjct: 181 FNGLQIDGDITKVLSPLPIPEKFKAFNWNVIEVNGHDLDELHNAIESAKAFT---EGPTC 237 Query: 277 IEMLTYRYRG 286 I M T + +G Sbjct: 238 IVMHTVKGKG 247 >gi|226225796|ref|YP_002759902.1| 2-oxoglutarate dehydrogenase E1 component [Gemmatimonas aurantiaca T-27] gi|226088987|dbj|BAH37432.1| 2-oxoglutarate dehydrogenase E1 component [Gemmatimonas aurantiaca T-27] Length = 923 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 76/191 (39%), Gaps = 17/191 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A +G V E+ NI+ L I++I NNQ T A + S Sbjct: 330 VPVAIHGDAAFPGEGIVAETLNISHLNAYRTGGTIHIIVNNQVGFTTDPGDARSTYYSSD 389 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 F IP V+ D + M A AY K ++I+++ YR GH+ D Y Sbjct: 390 LAKGFEIPIFHVNADDAESCITAMRLACAYRTMFKKDVLIDLVGYRRHGHNEGDEPMYTQ 449 Query: 298 REEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNV-----------RKIINNSVE 345 +R H + QV RL+ + + +E +V ++ + +S + Sbjct: 450 PTRTTAIR-KHPTVPQVWATRLVKEGVLTADEAAAVEKDVSQRYADIHSAFKQSLLSSEK 508 Query: 346 FAQSDKEPDPA 356 A EP PA Sbjct: 509 HAPWPAEPSPA 519 >gi|268317917|ref|YP_003291636.1| 2-oxoglutarate dehydrogenase, E1 subunit [Rhodothermus marinus DSM 4252] gi|262335451|gb|ACY49248.1| 2-oxoglutarate dehydrogenase, E1 subunit [Rhodothermus marinus DSM 4252] Length = 1220 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 I ++ GD A A QG V E+ N++ L I+++ NNQ T+ + A + T + Sbjct: 631 IPILIHGDAAFAGQGVVAETLNLSQLRGYKTGGTIHIVVNNQIGFTTAPADARSSTYATD 690 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 P V+G D A A+ Y + ++I+++ YR GH+ +D Y Sbjct: 691 IARMIQAPIFHVNGDDPEACVRVARLALDYRQVFNKDVVIDLVCYRVHGHNEADEPTY 748 >gi|195395957|ref|XP_002056600.1| GJ10136 [Drosophila virilis] gi|194143309|gb|EDW59712.1| GJ10136 [Drosophila virilis] Length = 626 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 79/196 (40%), Gaps = 20/196 (10%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++G G+A+ K + ++D V GDG + +G V+ES + AA + L N+ Sbjct: 120 GTGSLGQGVAVGAGMAYVGKNFDKADYRTYVIVGDGESAEGSVWESLHFAAHYGLDNLCV 179 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 + + N+ S + R +F + VDG DI + + +C A Sbjct: 180 IFDVNRLGQSEPTSLQHKMDVYRDRLEAFGFNALVVDGHDIEELCKAL-----HCAASTK 234 Query: 274 PIIIEMLTYRYRGHSMSD----------PANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 ++ ++G D P + I ++S I +L K Sbjct: 235 SKPTAIIAKTFKGKDFPDIEDLDNWHGKPLGDKAAAVIKHLQSQ---IVNPNVKLTPKKM 291 Query: 324 ASEGDLKEIEMNVRKI 339 G E+++N K+ Sbjct: 292 CKSGQAPEVDINNIKL 307 >gi|315656149|ref|ZP_07909040.1| 2-oxoglutarate dehydrogenase E1 component [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493151|gb|EFU82751.1| 2-oxoglutarate dehydrogenase E1 component [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 1241 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A QG VYE+ N++ L I++I NNQ TS + A + + Sbjct: 653 LPVLIHGDAAFIGQGVVYETLNMSQLKAYTTGGTIHIIVNNQIGFTTSPTNARSTNYCTD 712 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 +P V+ D V A + + +II+++ YR RGH SM+ Sbjct: 713 LAKGLQVPIFHVNADDPEMVTRVAGLAYRFQQKFHKDVIIDLICYRRRGHNEGDDPSMTQ 772 Query: 292 PANY 295 P Y Sbjct: 773 PVMY 776 >gi|325264938|ref|ZP_08131666.1| transketolase, N- subunit [Clostridium sp. D5] gi|324029927|gb|EGB91214.1| transketolase, N- subunit [Clostridium sp. D5] Length = 278 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +GQV+E+ +AA L N++ +++ Sbjct: 115 GSLGQGISAAVGMAIAAKLSGDDYRVYTLVGDGEIQEGQVWEASMLAAHRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + ++ ++ K+ +FN + ++G D + A +A Sbjct: 175 NNNLQIDGAIDEVNSPYPIDKKFEAFNFHVINIEGNDFDQIDAAFKEA 222 >gi|229010653|ref|ZP_04167853.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus mycoides DSM 2048] gi|228750618|gb|EEM00444.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus mycoides DSM 2048] Length = 955 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 + ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 TKSFVILVHGDAAFPGQGVVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRTLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|227503791|ref|ZP_03933840.1| alpha-ketoglutarate decarboxylase [Corynebacterium striatum ATCC 6940] gi|227199615|gb|EEI79663.1| alpha-ketoglutarate decarboxylase [Corynebacterium striatum ATCC 6940] Length = 1244 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 5/137 (3%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD + N G V E+ N++ L ++++ NNQ T+ A + + Sbjct: 653 VPVMLHGDSSFNGLGIVQETINLSQLRGYTTGGTVHIVVNNQVGFTTAPDSARSTHYATD 712 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 F+ P V+G D AV A Y R + I+++ YR RGH+ +D + T Sbjct: 713 LAKGFDCPVFHVNGDDPEAVVWVGQLATEYRRKFGKDVFIDLICYRLRGHNEADDPSM-T 771 Query: 298 REEINEMRSNHDPIEQV 314 + E+ + H + ++ Sbjct: 772 QPELYSIIDEHKSVREI 788 >gi|257057028|ref|YP_003134860.1| alpha-ketoglutarate decarboxylase [Saccharomonospora viridis DSM 43017] gi|256586900|gb|ACU98033.1| 2-oxoglutarate dehydrogenase E1 component [Saccharomonospora viridis DSM 43017] Length = 1251 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N+A L ++VI NNQ T+ A + + Sbjct: 671 MPVLLHGDAAFAGQGVVAETLNLAMLRGYRTGGTVHVIINNQVGFTTAPEHARSSQYATD 730 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV Y + ++I+++ YR RGH SM+ Sbjct: 731 VAKMIGAPIFHVNGDDPEAAYWVARLAVDYRQTFNKDVVIDLICYRRRGHNEGDDPSMTQ 790 Query: 292 PANY 295 P Y Sbjct: 791 PRMY 794 >gi|289207284|ref|YP_003459350.1| 2-oxoglutarate dehydrogenase, E1 subunit [Thioalkalivibrio sp. K90mix] gi|288942915|gb|ADC70614.1| 2-oxoglutarate dehydrogenase, E1 subunit [Thioalkalivibrio sp. K90mix] Length = 933 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 11/135 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + VV GD A A QG V E+ N++ + ++V+ NNQ TS + + T+++ Sbjct: 338 MPVVIHGDAAFAGQGVVMETLNMSQTRGFSTKGTVHVVVNNQIGFTTSTLKDARSTHYAT 397 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD----- 291 N P + V+G D AV A+ Y ++I+++ YR +GH+ +D Sbjct: 398 DVAKMVNAPILHVNGDDPEAVVFVTQVALDYRMRFGKDVVIDLVCYRRQGHNEADEPAAT 457 Query: 292 -PANYRTREEINEMR 305 P YR ++ R Sbjct: 458 QPHMYRRIRDLPTTR 472 >gi|29840182|ref|NP_829288.1| alpha-ketoglutarate decarboxylase [Chlamydophila caviae GPIC] gi|29834530|gb|AAP05166.1| 2-oxoglutarate dehydrogenase, E1 component [Chlamydophila caviae GPIC] Length = 908 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 8/177 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + ++ GD A + QG VYE+ ++ + + ++++ NN T+ R S T + + Sbjct: 321 LAILIHGDAAFSGQGIVYETLQLSQVPGYSTGGTLHIVVNNHIGF-TAQPRESRSTPYCT 379 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 IP +V+ D+ A ++ ++ +II+ YR GH+ SD + Sbjct: 380 DIAKMLGIPVFRVNAEDVSACMQAIEYSLKVREEFNCDVIIDFCCYRKYGHNESDDPSIT 439 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWA--SEGDLKEIEMNVRKIINNSVEFAQSDK 351 +E++ E RK LL N + SE L++IE V+ I+N + + ++ Sbjct: 440 APLLYDEIKKKSTIREIYRKYLLDNYPSEISEDSLEKIEKGVQDILNKEFQVLKQEE 496 >gi|330957458|gb|EGH57718.1| transketolase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 282 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 90/227 (39%), Gaps = 17/227 (7%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 IRR + GQ+ G G VG G L + K E +Q Y GH A Sbjct: 20 IRRHALRMGQVQGQGYVGQALGAADLLAVSYFHAMTYKPQDPEWEQRDRFYLSIGH-YAI 78 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FAN 174 + A+ I A++ + G S S + G I G + G GIA Sbjct: 79 ALYAALIEADIIPLDELETYGSDDSRLPMSGMATYTPGMEITGGSLGHGLGIAVGACLGL 138 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQ 232 K + S DG N+G +E+ A+ W L N+I +I+ NNQ A G S S A Sbjct: 139 KRKASSAFVYNLLSDGELNEGSTWEAAMSASHWKLDNLIAIIDVNNQQADGHS-SEVLAF 197 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--PIII 277 R +F +VDG D+ A+ D A R H G P +I Sbjct: 198 EPIVDRWQAFGWFTQRVDGNDLNALVTAFDAA----RQHDGAQPRVI 240 >gi|331002439|ref|ZP_08325957.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae oral taxon 107 str. F0167] gi|330410255|gb|EGG89689.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae oral taxon 107 str. F0167] Length = 625 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 75/191 (39%), Gaps = 54/191 (28%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +S G G+AF R + + GDGA G YE+ N AA N I Sbjct: 110 FNTGHS--STSLSAGLGMAFGRDIRGENYRIISVIGDGALTGGMAYEALNNAARIKKNFI 167 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFN----------------------------- 243 V+ +N+ ++ +V + N + S+N Sbjct: 168 MVLNDNEMSISKNVGGMNDYLNNIRTADSYNNLKKAVVSSLEKLPYMGKPMIDSIRQTKN 227 Query: 244 ------IPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 IPGM VDG +I A+ D+A + +GP+++ +LT + +G Sbjct: 228 GIKQILIPGMLFENMGVTYLGPVDGHNIFALLKVFDEA----KKVEGPVLVHVLTKKGKG 283 Query: 287 HSMSD--PANY 295 +S ++ P N+ Sbjct: 284 YSPAENHPENF 294 >gi|317153680|ref|YP_004121728.1| transketolase domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316943931|gb|ADU62982.1| Transketolase domain-containing protein [Desulfovibrio aespoeensis Aspo-2] Length = 282 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 14/129 (10%) Query: 147 FSTKNGFYGGH-------------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 F +G GGH G +G +S+G G+A + R D V GDG N Sbjct: 102 FCACDGLLGGHPSANKIPGVEVSTGALGHGLSVGLGMAVDARVRGRDNRVFVVMGDGECN 161 Query: 194 QGQVYE-SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 +G ++E + + N++ +++ N+Y S F+ + +F ++V+G Sbjct: 162 EGSIWEAAMSAGKRGQDNLVAMVDYNKYQSYGETSEVQELEPFAAKWEAFGFHCVEVNGH 221 Query: 253 DIRAVKATM 261 D+ A+++ + Sbjct: 222 DVEALRSAL 230 >gi|304392546|ref|ZP_07374486.1| putative transketolase N- section [Ahrensia sp. R2A130] gi|303295176|gb|EFL89536.1| putative transketolase N- section [Ahrensia sp. R2A130] Length = 277 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 12/170 (7%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDK-ICVVCFGDGAANQGQVYESFNIAALWNL- 209 G G +G + +G GIA ANK ++SD +V DG N+G V+E+ A L Sbjct: 109 GVEAATGSLGHGLPIGAGIALANKIKKSDPHRTIVIMSDGECNEGSVWEAAMFAGGNGLD 168 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 N++ ++ N++ + A + ++ +F QVDG + A+ M Sbjct: 169 NLMVFVDYNKWQATARSNETLALSPLREKWEAFGWDAHQVDGHNPDALADLMTN---MPN 225 Query: 270 AHKGPIIIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRL 318 P+ I T + +G M D N+ R H+ +E+ K+L Sbjct: 226 GSGKPVAIICDTVKGKGVDFMEDDNNWHYR------VPKHEEVEEAHKQL 269 >gi|256821708|ref|YP_003145671.1| deoxyxylulose-5-phosphate synthase [Kangiella koreensis DSM 16069] gi|256795247|gb|ACV25903.1| deoxyxylulose-5-phosphate synthase [Kangiella koreensis DSM 16069] Length = 619 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ + + +H F + + F GH +S G+A A K + D+ Sbjct: 86 LTGRRDQLQTIRQTDGLHPFPVRTESEYDTFAVGHS--STSISAALGMALAAKQKGEDRH 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 CV GDGA G +E+ N AA + NV+ ++ +N+ ++ +V Sbjct: 144 CVAVIGDGALTGGMAFEAMNHAADTDANVLVILNDNEMSISENV 187 >gi|258422554|ref|ZP_05685462.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A9635] gi|257847311|gb|EEV71317.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A9635] Length = 932 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 12/188 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKII---NNSVEFAQSDKEP 353 +R HD +E V K+L++ SE ++ V+K + ++ + A P Sbjct: 469 PVPYQNIRK-HDSVEYVFGKKLVNEGIISEDEMHSFIEQVQKELRQAHDKINKADKMDNP 527 Query: 354 D---PAEL 358 D PAEL Sbjct: 528 DMEKPAEL 535 >gi|300112821|ref|YP_003759396.1| 2-oxoglutarate dehydrogenase, E1 subunit [Nitrosococcus watsonii C-113] gi|299538758|gb|ADJ27075.1| 2-oxoglutarate dehydrogenase, E1 subunit [Nitrosococcus watsonii C-113] Length = 936 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 10/129 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMG 223 A + RR D I V+ GD A A QG V E+FN++ + ++++ NNQ Sbjct: 334 ARQQRRKDWLGDEVIPVLIHGDSAFAGQGVVMETFNMSQSRGFFTGGTLHIVINNQVGFT 393 Query: 224 TSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 TS + T + + P V+G D AV T A+ Y K ++I+++ Y Sbjct: 394 TSNPLDTRSTVYCTDVAKMVQAPIFHVNGDDPEAVLFTARLALDYRTTFKKDVVIDLVCY 453 Query: 283 RYRGHSMSD 291 R +GH+ +D Sbjct: 454 RRQGHNEAD 462 >gi|83953477|ref|ZP_00962199.1| 2-oxoglutarate dehydrogenase, E1 component [Sulfitobacter sp. NAS-14.1] gi|83842445|gb|EAP81613.1| 2-oxoglutarate dehydrogenase, E1 component [Sulfitobacter sp. NAS-14.1] Length = 987 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/176 (20%), Positives = 77/176 (43%), Gaps = 4/176 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R+ + ++ GD A A QG V E F ++ L ++++ NNQ T+ + Sbjct: 379 NDKERTSVMPILLHGDAAFAGQGVVAECFALSGLRGHRTGGTMHIVVNNQIGFTTAPHFS 438 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D AV A + + K ++I+++ YR GH+ Sbjct: 439 RSSPYPTDNALVVEAPIFHVNGDDPEAVVHAARVATEFRQKFKKDVVIDLICYRRFGHNE 498 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 D + +++ + +RL+ + EG++++++ ++ +N E Sbjct: 499 GDEPMFTNPVMYKKIKKQKTTLTLYTERLVKDGLIPEGEIEDMKAAFQEKMNTEFE 554 >gi|229056994|ref|ZP_04196389.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus AH603] gi|228720383|gb|EEL71957.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus AH603] Length = 955 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 + ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 TKSFVILVHGDAAFPGQGVVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRTLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|182418167|ref|ZP_02949467.1| transketolase [Clostridium butyricum 5521] gi|237666116|ref|ZP_04526103.1| transketolase, thiamine diphosphate binding subunit [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377985|gb|EDT75525.1| transketolase [Clostridium butyricum 5521] gi|237658206|gb|EEP55759.1| transketolase, thiamine diphosphate binding subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 273 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + D GDG +GQV+E+ AA + L N+ ++ Sbjct: 116 GSLGQGISAAVGMALAGKLDKKDYRVFTILGDGELEEGQVWEASMAAAHYKLDNLTAFVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN + ++ K+ +F +++DG D ++ + KA A P + Sbjct: 176 NNGLQIDGNIEDVMNPGPIDKKFEAFGWNVLKIDGHDFDQIRDAISKA---KEAKGQPTV 232 Query: 277 IEMLTYRYRGHSM 289 I T + +G S Sbjct: 233 IVCKTIKGKGVSF 245 >gi|282919124|ref|ZP_06326859.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus C427] gi|282316934|gb|EFB47308.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus C427] Length = 932 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 12/188 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKII---NNSVEFAQSDKEP 353 +R HD +E V K+L++ SE ++ V+K + ++ + A P Sbjct: 469 PVPYQNIRK-HDSVEYVFGKKLVNEGIISEDEMHSFIEQVQKELRQAHDKINKADKMDNP 527 Query: 354 D---PAEL 358 D PAEL Sbjct: 528 DMEKPAEL 535 >gi|172040358|ref|YP_001800072.1| alpha-ketoglutarate decarboxylase [Corynebacterium urealyticum DSM 7109] gi|171851662|emb|CAQ04638.1| 2-oxoglutarate dehydrogenase E1 component [Corynebacterium urealyticum DSM 7109] Length = 1232 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 19/185 (10%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A G V E+ N++ L +V ++VI NNQ T+ + + Sbjct: 649 MPILLHGDAAFTGLGIVQETINLSKLNAYSVGGTVHVIVNNQIGFTTTPDSGRSTYYATD 708 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 F+ P V+G D AV AV Y + I++++YR RGH SM+ Sbjct: 709 LAKGFDAPVFHVNGDDPEAVVWVAQLAVDYRNRFGKDVFIDLVSYRRRGHNEADDPSMTQ 768 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR---KIINNSVEFAQ 348 P Y + INE+ ++ EQ + L+ SE + K + + + N V A+ Sbjct: 769 PLMY---DIINELPTSR---EQYTEALIGRGDISEEEAKRAAQDFHDQLETVFNQVREAE 822 Query: 349 SDKEP 353 D P Sbjct: 823 KDAPP 827 >gi|49483603|ref|YP_040827.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus MRSA252] gi|257425477|ref|ZP_05601902.1| succinyl-transferring oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus subsp. aureus 55/2053] gi|257428137|ref|ZP_05604535.1| succinyl-transferring oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus subsp. aureus 65-1322] gi|257430769|ref|ZP_05607151.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp. aureus 68-397] gi|257433528|ref|ZP_05609886.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp. aureus E1410] gi|257436369|ref|ZP_05612416.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus M876] gi|282903994|ref|ZP_06311882.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus C160] gi|282905758|ref|ZP_06313613.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282908729|ref|ZP_06316547.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910993|ref|ZP_06318795.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus WBG10049] gi|282914202|ref|ZP_06321989.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus subsp. aureus M899] gi|282924307|ref|ZP_06331981.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus C101] gi|283958176|ref|ZP_06375627.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus A017934/97] gi|293501228|ref|ZP_06667079.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus 58-424] gi|293510190|ref|ZP_06668898.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus M809] gi|293526782|ref|ZP_06671467.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus subsp. aureus M1015] gi|295427926|ref|ZP_06820558.1| oxoglutarate dehydrogenase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591113|ref|ZP_06949751.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus MN8] gi|81651147|sp|Q6GGZ5|ODO1_STAAR RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|49241732|emb|CAG40422.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus MRSA252] gi|257271934|gb|EEV04072.1| succinyl-transferring oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus subsp. aureus 55/2053] gi|257274978|gb|EEV06465.1| succinyl-transferring oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus subsp. aureus 65-1322] gi|257278897|gb|EEV09516.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp. aureus 68-397] gi|257281621|gb|EEV11758.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp. aureus E1410] gi|257284651|gb|EEV14771.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus M876] gi|282313694|gb|EFB44087.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus C101] gi|282322270|gb|EFB52594.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus subsp. aureus M899] gi|282324688|gb|EFB54998.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus WBG10049] gi|282326993|gb|EFB57288.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331050|gb|EFB60564.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595612|gb|EFC00576.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus C160] gi|283790325|gb|EFC29142.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus A017934/97] gi|290920854|gb|EFD97917.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus subsp. aureus M1015] gi|291096233|gb|EFE26494.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus 58-424] gi|291467134|gb|EFF09652.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus M809] gi|295128284|gb|EFG57918.1| oxoglutarate dehydrogenase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575999|gb|EFH94715.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus MN8] gi|312438187|gb|ADQ77258.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus TCH60] gi|315195306|gb|EFU25693.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp. aureus CGS00] Length = 932 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 12/188 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKII---NNSVEFAQSDKEP 353 +R HD +E V K+L++ SE ++ V+K + ++ + A P Sbjct: 469 PVPYQNIRK-HDSVEYVFGKKLVNEGIISEDEMHSFIEQVQKELRQAHDKINKADKMDNP 527 Query: 354 D---PAEL 358 D PAEL Sbjct: 528 DMEKPAEL 535 >gi|323438698|gb|EGA96440.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus O11] gi|323444067|gb|EGB01678.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus O46] Length = 932 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 12/188 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKII---NNSVEFAQSDKEP 353 +R HD +E V K+L++ SE ++ V+K + ++ + A P Sbjct: 469 PVPYQNIRK-HDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKMDNP 527 Query: 354 D---PAEL 358 D PAEL Sbjct: 528 DMEKPAEL 535 >gi|229166201|ref|ZP_04293961.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus AH621] gi|228617299|gb|EEK74364.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus AH621] Length = 955 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 + ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 TKSFVILVHGDAAFPGQGVVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRTLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|329114367|ref|ZP_08243129.1| 2-oxoglutarate dehydrogenase E1 component [Acetobacter pomorum DM001] gi|326696443|gb|EGE48122.1| 2-oxoglutarate dehydrogenase E1 component [Acetobacter pomorum DM001] Length = 1004 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 4/119 (3%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 +R + V+ GD A A QG VYE+F ++ L I+++ NNQ T+ + Sbjct: 404 KRLSSLGVIIHGDAAFAGQGIVYETFAMSQLPGYRTGGTIHMVVNNQIGFTTNPECGHSG 463 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + S P + V+G D AV A Y +A I+++++ YR GH+ +D Sbjct: 464 VYGTDVAKSIEAPVLHVNGDDAEAVIYVSRLAADYRQAFASDIVLDIICYRRHGHNETD 522 >gi|196230610|ref|ZP_03129472.1| 2-oxoglutarate dehydrogenase, E1 subunit [Chthoniobacter flavus Ellin428] gi|196225540|gb|EDY20048.1| 2-oxoglutarate dehydrogenase, E1 subunit [Chthoniobacter flavus Ellin428] Length = 919 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 4/118 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R I V+ GD A A QG V E+ N++ L + +++I NNQ T + A + T Sbjct: 329 RRKVIAVLIHGDAAFAGQGIVAETLNMSQLQGYRIGGTVHIIVNNQIGFTTLPADARSTT 388 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + P V+G + AV+ + A+ + + K ++I++ YR GH+ +D Sbjct: 389 YCTDVAKMIEAPIFHVNGDNPLAVRFVSELALEFRQTFKRDVVIDIYCYRRHGHNEAD 446 >gi|163939159|ref|YP_001644043.1| alpha-ketoglutarate decarboxylase [Bacillus weihenstephanensis KBAB4] gi|226738923|sp|A9VJX9|ODO1_BACWK RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|163861356|gb|ABY42415.1| 2-oxoglutarate dehydrogenase, E1 subunit [Bacillus weihenstephanensis KBAB4] Length = 955 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 + ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 TKSFVILVHGDAAFPGQGVVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRTLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|253732050|ref|ZP_04866215.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724212|gb|EES92941.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 932 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 12/188 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKII---NNSVEFAQSDKEP 353 +R HD +E V K+L++ SE ++ V+K + ++ + A P Sbjct: 469 PVPYQNIRK-HDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKMDNP 527 Query: 354 D---PAEL 358 D PAEL Sbjct: 528 DMEKPAEL 535 >gi|254361862|ref|ZP_04977996.1| oxoglutarate dehydrogenase (succinyl-transferring) [Mannheimia haemolytica PHL213] gi|153093401|gb|EDN74392.1| oxoglutarate dehydrogenase (succinyl-transferring) [Mannheimia haemolytica PHL213] Length = 937 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + V GD A A QG V E+ N+A + V I ++ NNQ TS + T F + Sbjct: 353 LAVTVHGDSAVAGQGVVQETLNMANVRGYKVGGTIRIVINNQIGFTTSNPNDTRSTEFCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P + V+G D AV AV Y K I I++++YR GH+ +D Sbjct: 413 DIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRTKFKRDIFIDLISYRRHGHNEAD 467 >gi|87310357|ref|ZP_01092487.1| alpha-ketoglutarate dehydrogenase E1 [Blastopirellula marina DSM 3645] gi|87286856|gb|EAQ78760.1| alpha-ketoglutarate dehydrogenase E1 [Blastopirellula marina DSM 3645] Length = 929 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 13/158 (8%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A + RR D V+ GD A A +G V E+ N++ L ++VI NNQ Sbjct: 330 AKQDRRGDTERQMGAVVLIHGDAAFAGEGVVQETLNLSQLHGYRTGGTLHVIVNNQLGFT 389 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + + + P V+G + AV + A+ + R H+ ++I+M +R Sbjct: 390 TQPHDSRSTIYATDVARMLQSPIFHVNGENPAAVSQVVSLALEFRRTHQRDVVIDMYCFR 449 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHN 321 GH+ +D ++ T+ + + +H +R R L N Sbjct: 450 RFGHNETDEPSF-TQPLLYQAIEHH---RSIRDRFLDN 483 >gi|57634631|ref|NP_371937.2| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus Mu50] gi|148267901|ref|YP_001246844.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus JH9] gi|150393964|ref|YP_001316639.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus JH1] gi|156979732|ref|YP_001441991.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus Mu3] gi|253315264|ref|ZP_04838477.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253733340|ref|ZP_04867505.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp. aureus TCH130] gi|255006202|ref|ZP_05144803.2| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795532|ref|ZP_05644511.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A9781] gi|258413340|ref|ZP_05681616.1| oxoglutarate dehydrogenase [Staphylococcus aureus A9763] gi|258420553|ref|ZP_05683495.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A9719] gi|258434675|ref|ZP_05688749.1| oxoglutarate dehydrogenase [Staphylococcus aureus A9299] gi|258444749|ref|ZP_05693078.1| oxoglutarate dehydrogenase [Staphylococcus aureus A8115] gi|258447416|ref|ZP_05695560.1| oxoglutarate dehydrogenase [Staphylococcus aureus A6300] gi|258449257|ref|ZP_05697360.1| oxoglutarate dehydrogenase [Staphylococcus aureus A6224] gi|258454637|ref|ZP_05702601.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A5937] gi|269203036|ref|YP_003282305.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus ED98] gi|282892907|ref|ZP_06301142.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A8117] gi|282927938|ref|ZP_06335547.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A10102] gi|295406360|ref|ZP_06816167.1| oxoglutarate dehydrogenase [Staphylococcus aureus A8819] gi|296275273|ref|ZP_06857780.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus MR1] gi|297244589|ref|ZP_06928472.1| oxoglutarate dehydrogenase [Staphylococcus aureus A8796] gi|81774913|sp|Q931R8|ODO1_STAAM RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|166215766|sp|A7X295|ODO1_STAA1 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|189029259|sp|A6U1N4|ODO1_STAA2 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|189029260|sp|A5ISU5|ODO1_STAA9 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|46395526|dbj|BAB57575.2| oxoglutarate dehydrogenase [Staphylococcus aureus subsp. aureus Mu50] gi|147740970|gb|ABQ49268.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus JH9] gi|149946416|gb|ABR52352.1| 2-oxoglutarate dehydrogenase, E1 subunit [Staphylococcus aureus subsp. aureus JH1] gi|156721867|dbj|BAF78284.1| oxoglutarate dehydrogenase [Staphylococcus aureus subsp. aureus Mu3] gi|253728692|gb|EES97421.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp. aureus TCH130] gi|257789504|gb|EEV27844.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A9781] gi|257839904|gb|EEV64372.1| oxoglutarate dehydrogenase [Staphylococcus aureus A9763] gi|257843501|gb|EEV67908.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A9719] gi|257849036|gb|EEV73018.1| oxoglutarate dehydrogenase [Staphylococcus aureus A9299] gi|257850242|gb|EEV74195.1| oxoglutarate dehydrogenase [Staphylococcus aureus A8115] gi|257853607|gb|EEV76566.1| oxoglutarate dehydrogenase [Staphylococcus aureus A6300] gi|257857245|gb|EEV80143.1| oxoglutarate dehydrogenase [Staphylococcus aureus A6224] gi|257863020|gb|EEV85784.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A5937] gi|262075326|gb|ACY11299.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus ED98] gi|282590235|gb|EFB95315.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A10102] gi|282764904|gb|EFC05029.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A8117] gi|285817091|gb|ADC37578.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus 04-02981] gi|294968948|gb|EFG44970.1| oxoglutarate dehydrogenase [Staphylococcus aureus A8819] gi|297178619|gb|EFH37865.1| oxoglutarate dehydrogenase [Staphylococcus aureus A8796] gi|312829808|emb|CBX34650.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus ECT-R 2] gi|329727040|gb|EGG63496.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus 21172] Length = 932 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 12/188 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKII---NNSVEFAQSDKEP 353 +R HD +E V K+L++ SE ++ V+K + ++ + A P Sbjct: 469 PVPYQNIRK-HDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKMDNP 527 Query: 354 D---PAEL 358 D PAEL Sbjct: 528 DMEKPAEL 535 >gi|86359469|ref|YP_471361.1| alpha-ketoglutarate decarboxylase [Rhizobium etli CFN 42] gi|86283571|gb|ABC92634.1| oxoglutarate dehydrogenase E1 subunit protein [Rhizobium etli CFN 42] Length = 994 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG + E ++ L V ++VI NNQ T+ + + + Sbjct: 391 RAKVLPLLIHGDAAFAGQGVIAEILGLSGLRGHRVAGTMHVIINNQIGFTTNPAFSRSSP 450 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P + V+G D AV A + P++++M YR GH+ D Sbjct: 451 YPSDVAKMIEAPILHVNGDDPEAVVYAAKIATEFRMKFHKPVVLDMFCYRRYGHNEGDEP 510 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ + +R + ++ RL+ +EG++++++ + R + + Q K P Sbjct: 511 SFTQPKMYKVIRGHKTVLQLYAARLVAEGLLTEGEVEKMKADWRAHLEQEFDAGQHYK-P 569 Query: 354 DPAE 357 + A+ Sbjct: 570 NKAD 573 >gi|166215767|sp|P0C601|ODO1_STAAU RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|32399898|emb|CAD92196.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399900|emb|CAD92197.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399902|emb|CAD92198.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399904|emb|CAD92199.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399906|emb|CAD92200.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399908|emb|CAD92201.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399910|emb|CAD92202.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399912|emb|CAD92203.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399914|emb|CAD92204.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399916|emb|CAD92205.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399918|emb|CAD92206.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399920|emb|CAD92207.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399922|emb|CAD92208.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399924|emb|CAD92209.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] Length = 932 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 12/188 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKII---NNSVEFAQSDKEP 353 +R HD +E V K+L++ SE ++ V+K + ++ + A P Sbjct: 469 PVPYQNIRK-HDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKMDNP 527 Query: 354 D---PAEL 358 D PAEL Sbjct: 528 DMEKPAEL 535 >gi|17545988|ref|NP_519390.1| alpha-ketoglutarate decarboxylase [Ralstonia solanacearum GMI1000] gi|17428283|emb|CAD14971.1| probable oxoglutarate dehydrogenase oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 953 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 11/132 (8%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A + RR DK + V GD A A QG V E+ N+A I+++ NNQ Sbjct: 343 ARQERRGDKTGEQVLAVQVHGDAAFAGQGVVMETLNLAQTRGYGTGGTIHIVINNQIGFT 402 Query: 224 TSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 TS R S T + V P + V+G D AV M A+ + K + ++++ + Sbjct: 403 TSDPRDSRSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAMQLAIDFRTEFKKDVAVDIICF 462 Query: 283 RYRGHSMSD-PA 293 R GH+ D PA Sbjct: 463 RKLGHNEQDTPA 474 >gi|304317335|ref|YP_003852480.1| transketolase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778837|gb|ADL69396.1| Transketolase domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 273 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + D V GDG +GQ++E+ AA + L N+ +++ Sbjct: 115 GSLGQGLSAANGMALAAKLDKKDYRVYVILGDGEIQEGQIWEAAMTAAHYKLDNLTAILD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + ++ +F ++ DG + +DKA+ +A KG P Sbjct: 175 NNGLQIDGRNEEVMNIQPIDEKFRAFGWNAIEADGHNFE----ELDKALEEAKATKGKPT 230 Query: 276 IIEMLTYRYRGHS 288 II T + +G S Sbjct: 231 IIIAKTIKGKGVS 243 >gi|254477013|ref|ZP_05090399.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Ruegeria sp. R11] gi|214031256|gb|EEB72091.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Ruegeria sp. R11] Length = 985 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/188 (21%), Positives = 82/188 (43%), Gaps = 5/188 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRA 229 N RS + ++ GD A A QG V E F ++ L I+++ NNQ T+ + Sbjct: 379 NDADRSKVLPILLHGDAAFAGQGVVAECFALSGLRGHKAGGTIHIVVNNQIGFTTAPHFS 438 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D AV A + + ++I++ YR GH+ Sbjct: 439 RSSPYPTDNALVVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDIFCYRRFGHNE 498 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + +++ + + +RL+ + EG++++++ + +N E A Sbjct: 499 GDEPMFTNPLMYKKIKGHKTTLSLYTERLVKDGLIPEGEIEDMKAAFQARLNEEFE-AGK 557 Query: 350 DKEPDPAE 357 + +P+ A+ Sbjct: 558 EYKPNKAD 565 >gi|145596202|ref|YP_001160499.1| alpha-ketoglutarate decarboxylase [Salinispora tropica CNB-440] gi|145305539|gb|ABP56121.1| 2-oxoglutarate dehydrogenase E1 component [Salinispora tropica CNB-440] Length = 1270 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 14/127 (11%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV--SRASAQTNF 235 + + GD A A QG V E+ N++ L ++V+ NNQ T SR+S + Sbjct: 690 LPLAVHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHVVVNNQVGFTTPPEYSRSSLYSTD 749 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SM 289 R + P V+G D AV A Y + ++I+++ YR RGH SM Sbjct: 750 VARMI--QAPIFHVNGDDPEAVVRVAQLAFEYRQTFNKDVVIDLVCYRRRGHNEGDDPSM 807 Query: 290 SDPANYR 296 S+P YR Sbjct: 808 SNPEMYR 814 >gi|27375563|ref|NP_767092.1| 2-oxoglutarate dehydrogenase E1 component [Bradyrhizobium japonicum USDA 110] gi|27348700|dbj|BAC45717.1| alpha-ketoglutarate dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 985 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 5/180 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E F ++ L ++ I NNQ T + + S Sbjct: 387 MPLLMHGDAAFAGQGVVAECFGLSDLKGYRTGGSVHFIVNNQIGFTTYPRYSRSSPYPSD 446 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P V+G D AV A + + P++I+M YR GH+ D + Sbjct: 447 VAKMIDAPIFHVNGDDPEAVVFAAKVATEFRQKFHKPVVIDMFCYRRHGHNEGDEPAFTQ 506 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 ++ ++ +E +RL+ +EG++ + + + R ++ E S K P+ A+ Sbjct: 507 PVMYKKIAAHPSTLELYARRLISEGVMTEGEVDKAKADWRARLDAEFEAGTSYK-PNKAD 565 >gi|315655924|ref|ZP_07908822.1| 2-oxoglutarate dehydrogenase E1 component [Mobiluncus curtisii ATCC 51333] gi|315489988|gb|EFU79615.1| 2-oxoglutarate dehydrogenase E1 component [Mobiluncus curtisii ATCC 51333] Length = 1241 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A QG VYE+ N++ L +++I NNQ TS + A + + Sbjct: 653 LPVLVHGDAAFVGQGVVYETLNMSQLKAYTTGGTVHIIVNNQIGFTTSPTNARSTNYCTD 712 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 +P V+ D V A + + +II+++ YR RGH SM+ Sbjct: 713 LAKGLQVPIFHVNADDPEMVTRVAGLAYRFRQKFHKDVIIDLICYRRRGHNEGDDPSMTQ 772 Query: 292 PANY 295 P Y Sbjct: 773 PVMY 776 >gi|301096175|ref|XP_002897185.1| 2-oxoglutarate dehydrogenase E1 component, putative [Phytophthora infestans T30-4] gi|262107270|gb|EEY65322.1| 2-oxoglutarate dehydrogenase E1 component, putative [Phytophthora infestans T30-4] Length = 1043 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A + QG VYE+ +++ L N + ++V+ NNQ T + + + Sbjct: 413 VPLLLHGDAAFSGQGVVYETMHLSGLDNYDTGGTVHVVVNNQIGFTTDPKNSRSSQYCTD 472 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 G + ++P + V+G D +V + A + + + +II + YR GH+ D Sbjct: 473 LGKAMDVPILHVNGDDPGSVVKVFEFAAEWRQKWRSDVIINLTCYRRFGHNEVD 526 >gi|124512370|ref|XP_001349318.1| 2-oxoglutarate dehydrogenase E1 component [Plasmodium falciparum 3D7] gi|23499087|emb|CAD51167.1| 2-oxoglutarate dehydrogenase E1 component [Plasmodium falciparum 3D7] Length = 1038 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 74/310 (23%), Positives = 124/310 (40%), Gaps = 41/310 (13%) Query: 87 GQEAVIVGMKMSLTEGDQ-------MITAYREHGHIL--ACGVDASKIMAELTGRQG--- 134 G E +I GMK + Q M ++R ++L ++M+E G+ G Sbjct: 282 GCETLITGMKALIKRAAQLDVDSVLMSMSHRGRLNVLFNVLHKPLEQMMSEFRGKTGFSD 341 Query: 135 -------GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT------GIAFANKYRRSDK 181 + G + + + Y GIV L + G A A +Y +DK Sbjct: 342 NIWGNTGDVKYHLGVEIDYYDEDSQRYIHMGIVDNSSHLESVDPILMGQARAQQYYCNDK 401 Query: 182 -----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 + + GD + A QG YE+F ++ L + NV I+++ NNQ T A + Sbjct: 402 EKKKVLPITIHGDASIAGQGIAYETFQMSKLPSYNVGGTIHIVVNNQIGFTTYPIDARSG 461 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + +IP + V+ D AV + A+ II+++ YR GH+ D Sbjct: 462 KYCTDIAKCIDIPIIHVNADDPEAVTYVFELALDIRNKFNIDTIIDIVGYRRFGHNELDM 521 Query: 293 ANYRTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + T + ++ + H + + K+L+ S LKE E N +I N + + K Sbjct: 522 PKF-TNPLLYDVIARHKSVLDIYSKKLIDENIIS---LKEFEDNKTEIFNFYEQVYEKSK 577 Query: 352 E--PDPAELY 359 P P E Y Sbjct: 578 SFVPTPKEKY 587 >gi|229132160|ref|ZP_04261018.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus BDRD-ST196] gi|228651307|gb|EEL07284.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus cereus BDRD-ST196] Length = 955 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 + ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 347 TKSFVILVHGDAAFPGQGVVSETLNLSRLNAYQTGGTIHVIANNAVGFTTDSYDSRSTKY 406 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 407 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRTLFKKDFLIDLIGYRRYGHNEMDDPA 466 Query: 294 NYRTREEINEMRSNHDPIEQV 314 T+ ++ + NH + + Sbjct: 467 --VTQPQVYKKIKNHPTVRAI 485 >gi|258541861|ref|YP_003187294.1| 2-oxoglutarate dehydrogenase E1 component [Acetobacter pasteurianus IFO 3283-01] gi|256632939|dbj|BAH98914.1| 2-oxoglutarate dehydrogenase E1 component [Acetobacter pasteurianus IFO 3283-01] gi|256635996|dbj|BAI01965.1| 2-oxoglutarate dehydrogenase E1 component [Acetobacter pasteurianus IFO 3283-03] gi|256639051|dbj|BAI05013.1| 2-oxoglutarate dehydrogenase E1 component [Acetobacter pasteurianus IFO 3283-07] gi|256642105|dbj|BAI08060.1| 2-oxoglutarate dehydrogenase E1 component [Acetobacter pasteurianus IFO 3283-22] gi|256645160|dbj|BAI11108.1| 2-oxoglutarate dehydrogenase E1 component [Acetobacter pasteurianus IFO 3283-26] gi|256648215|dbj|BAI14156.1| 2-oxoglutarate dehydrogenase E1 component [Acetobacter pasteurianus IFO 3283-32] gi|256651268|dbj|BAI17202.1| 2-oxoglutarate dehydrogenase E1 component [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654259|dbj|BAI20186.1| 2-oxoglutarate dehydrogenase E1 component [Acetobacter pasteurianus IFO 3283-12] Length = 1004 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 6/180 (3%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 +R + V+ GD A A QG VYE+F ++ L I+++ NNQ T+ + Sbjct: 404 KRLSSLGVIIHGDAAFAGQGIVYETFAMSQLPGYRTGGTIHMVVNNQIGFTTNPECGHSG 463 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + S P + V+G D AV A Y +A I+++++ YR GH+ +D Sbjct: 464 IYGTDVAKSIEAPVLHVNGDDAEAVIYVSRLAADYRQAFASDIVLDIVCYRRHGHNETDE 523 Query: 293 ANYRTREEINEMRSNHD-PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + T+ + + + HD P KRL+ ++ ++K ++ + AQS K Sbjct: 524 PVF-TQPVMYKAIAAHDTPHTLYAKRLVKAGVVTDDEVKAQWDAFHAKLDEDYKAAQSYK 582 >gi|148252003|ref|YP_001236588.1| 2-oxoglutarate dehydrogenase E1 component [Bradyrhizobium sp. BTAi1] gi|146404176|gb|ABQ32682.1| 2-oxoglutarate dehydrogenase E1 component [Bradyrhizobium sp. BTAi1] Length = 985 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 4/172 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E F ++ L I+ I NNQ T + + S Sbjct: 387 LPLLMHGDAAFAGQGVVAECFALSDLKGYRTGGSIHFIVNNQIGFTTYPRYSRSSPYPSD 446 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P V+G D AV A + + P++I+M YR GH+ D + Sbjct: 447 VAKMIDAPIFHVNGDDPEAVVFAAKVATEFRQKFHKPVVIDMFCYRRHGHNEGDEPAFTQ 506 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 ++ + +E KRL+ +EG++++ + + R ++ E S Sbjct: 507 PVMYKKIAGHPSTLEIYSKRLVAEGVMTEGEVEKAKADWRARLDAEFEAGTS 558 >gi|292557639|gb|ADE30640.1| Transketolase, N terminal [Streptococcus suis GZ1] Length = 282 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 5/118 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S+ TG+A+ K +S GDG N+GQ +E+ AA L+ +I ++ Sbjct: 117 GSLGQGMSVATGVAYGKKIEQSPYYTYTLVGDGELNEGQCWEAAQFAAHHELSKLILFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 +N+ + +F ++ +F ++V+G DI A+ A+ ++ K P Sbjct: 177 DNKKQLDGRTRDICQTFDFVEKFQAFGWESVRVNGADIDAII----NAILTLKSSKSP 230 >gi|269124124|ref|YP_003306701.1| Transketolase domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268315450|gb|ACZ01824.1| Transketolase domain protein [Streptobacillus moniliformis DSM 12112] Length = 269 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K D GDG +GQ++E+F AA + L N++ ++ Sbjct: 115 GSLGQGLSAAQGMAISAKISGEDYRVYAILGDGEMQEGQIWEAFMSAAHFKLDNLVAFLD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + VS T + + +FN ++++G +K KA+ + KG P Sbjct: 175 HNDLQIDGKVSEVMPITPIADKYRAFNWHVIEINGHCFDEIK----KALKEAKEVKGKPT 230 Query: 276 IIEMLTYRYRGHS-MSDPANYRTR----EEINE 303 +I T + +G S M D A + + EE+N+ Sbjct: 231 VIIAKTSKGKGVSFMEDNAGWHGKAPNLEELNK 263 >gi|256372497|ref|YP_003110321.1| 2-oxoglutarate dehydrogenase, E1 subunit [Acidimicrobium ferrooxidans DSM 10331] gi|256009081|gb|ACU54648.1| 2-oxoglutarate dehydrogenase, E1 subunit [Acidimicrobium ferrooxidans DSM 10331] Length = 1277 Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 9/156 (5%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD + A QG V E+ N++ L ++++ NNQ T+ S A + S Sbjct: 683 ILVHGDASFAGQGVVAETLNLSQLPGYRTGGTVHLVINNQVGFTTNPSEARSSFYASDIA 742 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + P V+G D AV AV Y ++++++ YR GH+ D +Y T+ Sbjct: 743 KTIQAPIFHVNGDDPEAVARCARLAVEYRATFHKDVVVDLICYRRHGHNEGDEPSY-TQP 801 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 + + H + +RL ++ G + E E + Sbjct: 802 VMYHVIEQHPSV----RRLYADQLVRSGAISEDEAD 833 >gi|228990345|ref|ZP_04150311.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus pseudomycoides DSM 12442] gi|228769421|gb|EEM18018.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus pseudomycoides DSM 12442] Length = 961 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 7/135 (5%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 353 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAIGFTTDSYDSRSTKY 412 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 413 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 472 Query: 294 NYRTREEINEMRSNH 308 T+ ++ + NH Sbjct: 473 --VTQPQVYKKIKNH 485 >gi|119383307|ref|YP_914363.1| alpha-ketoglutarate decarboxylase [Paracoccus denitrificans PD1222] gi|119373074|gb|ABL68667.1| 2-oxoglutarate dehydrogenase E1 component [Paracoccus denitrificans PD1222] Length = 988 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 5/190 (2%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 ++ R+ + ++ GD A A QG V E F ++ + I+++ NNQ T+ Sbjct: 380 LSDHTHRTAVLPILLHGDAAFAGQGIVAECFQLSGIKGHRTGGCIHIVVNNQIGFTTAPH 439 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + + + P V+G D AV A + + ++I++ YR GH Sbjct: 440 FSRTSPYPTDIALMVEAPIFHVNGDDPEAVVHAARVATEFRQKFHKDVVIDIFCYRRFGH 499 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D + ++ + +++ +RL+ + EG+++E++ + +N E Sbjct: 500 NEGDEPMFTNPAMYKAIKGHKTTLQRYTERLVADGLVPEGEIEEMKAAFQSHLNEEFEVG 559 Query: 348 QSDKEPDPAE 357 ++ K P+ A+ Sbjct: 560 KNFK-PNKAD 568 >gi|224052322|ref|XP_002193100.1| PREDICTED: oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Taeniopygia guttata] Length = 1012 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + I+V+ NNQ Sbjct: 379 AEQFYRGDTAGKKVMSILLHGDAAFAGQGVVYETFHLSDLPSYTTNGTIHVVVNNQIGFT 438 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 439 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVMYVCSVAAEWRNTFNKDVVVDLVCYR 498 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 499 RRGHNEMDEP 508 >gi|111022975|ref|YP_705947.1| alpha-ketoglutarate decarboxylase [Rhodococcus jostii RHA1] gi|110822505|gb|ABG97789.1| 2-oxoglutarate dehydrogenase, E1 and E2 components [Rhodococcus jostii RHA1] Length = 1258 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 12/182 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L ++++ NNQ T+ + + + Sbjct: 674 LPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTVHIVVNNQVGFTTAPEYSRSSEYCTD 733 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + ++I+M+ YR RGH SM+ Sbjct: 734 VAKMIGAPIFHVNGDDPEACVWVAQLAVDFREKFQKDVVIDMICYRRRGHNEGDDPSMTQ 793 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 PA Y + +R ++ E + R + +E L++ + + ++ N E + Sbjct: 794 PAMYDVIDTKRSVRKSY--TESLIGRGDISLKEAEDALRDYQGQLERVFNEVRELEKYTP 851 Query: 352 EP 353 EP Sbjct: 852 EP 853 >gi|325105096|ref|YP_004274750.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pedobacter saltans DSM 12145] gi|324973944|gb|ADY52928.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pedobacter saltans DSM 12145] Length = 926 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 14/192 (7%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT---NFS 236 +V GD + A QG VYE ++ L I+++ NNQ T+ A + T + + Sbjct: 333 IVIHGDASVAGQGLVYEVLQMSKLDAYKTGGTIHLVINNQIGFTTNYKDARSSTYCTDIA 392 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 K +S P V+G D+ A+ ++ AV Y + + I++L YR GH+ SD + Sbjct: 393 KVTLS---PVFHVNGDDVEALVYAINMAVEYRQRFHNDVFIDILCYRRYGHNESDEPRFT 449 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI----INNSVEFAQSDKE 352 ++ + +P E +L K+++ R++ +N S E + + Sbjct: 450 QPLLYKKIEKHPNPREIYVDKLKAQGAVDANLAKQMDKEFRELLQERLNESKEDPGAPEN 509 Query: 353 PDPAELYSDILI 364 P + +SD+ I Sbjct: 510 PTYSGAWSDLRI 521 >gi|225420188|ref|ZP_03762491.1| hypothetical protein CLOSTASPAR_06531 [Clostridium asparagiforme DSM 15981] gi|225041172|gb|EEG51418.1| hypothetical protein CLOSTASPAR_06531 [Clostridium asparagiforme DSM 15981] Length = 273 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 2/109 (1%) Query: 158 GIVGAQVSLGTGIAF-ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S+ G+A A K SD GDG +GQV+E+ AA + L N+ +I Sbjct: 116 GSLGQGISIAVGMALGAKKLDHSDVKVYTLLGDGELQEGQVWEASMAAAHYGLDNLTVII 175 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 +NN + + ++ + + + +F +++DG D+ V +D A Sbjct: 176 DNNGLQIDGANNQVMSLGDLKAKFTAFGFQVLEIDGNDLGQVSEALDAA 224 >gi|197116679|ref|YP_002137106.1| transketolase, N-terminal domain-containing protein [Geobacter bemidjiensis Bem] gi|197086039|gb|ACH37310.1| transketolase, N-terminal domain protein [Geobacter bemidjiensis Bem] Length = 274 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 7/142 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K D GDG +GQ++E+ A + N+ +I+ Sbjct: 117 GSLGQGLSMANGMALGFKLDGKDNRVYAVLGDGELQEGQIWEAAMAAGHYKSDNLCALID 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + VS+ + + +F +++DG D+ + + +DKA AHKG P Sbjct: 177 SNGLQIDGDVSKVMNVASIGDKFKAFGWNVIEIDGHDMGQIISALDKA----EAHKGAPT 232 Query: 276 IIEMLTYRYRG-HSMSDPANYR 296 I T + +G H + A+Y Sbjct: 233 AIIAKTVKGKGVHLFENKASYH 254 >gi|119194445|ref|XP_001247826.1| 2-oxoglutarate dehydrogenase E1 component [Coccidioides immitis RS] Length = 895 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 17/197 (8%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T A + S Sbjct: 442 VLLHGDAAFAAQGIVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRFARSTPYCSDIA 501 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + P V+ D+ AV A + K ++I+++ YR +GH+ +D + Sbjct: 502 KAIEAPVFHVNADDVEAVNFVCQLAADWRAQFKSDVVIDIVCYRKQGHNETDQPAFTQPL 561 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV----EFAQSDKE--- 352 + +++ +LL ++ D++E + V ++N+S E+ + +E Sbjct: 562 MYKRIADQTTQLDKYVNKLLQENTFTKEDIEEHKKWVWGMLNDSFDRSKEYQPTSREWLT 621 Query: 353 ------PDPAELYSDIL 363 P EL +++L Sbjct: 622 SAWNGFKSPKELATEVL 638 >gi|1765991|gb|AAC44748.1| alpha-ketoglutarate dehydrogenase [Bradyrhizobium japonicum] Length = 985 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 5/180 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E F ++ L ++ I NNQ T + + S Sbjct: 387 MPLLMHGDAAFAGQGVVAECFGLSDLKGYRTGGSVHFIVNNQIGFTTYPCYSRSSPYPSD 446 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P V+G D AV A + + P++I+M YR GH+ D + Sbjct: 447 VAKMIDAPIFHVNGDDPEAVVFAAKVATEFRQKFHKPVVIDMFCYRRHGHNEGDEPAFTQ 506 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 ++ ++ +E +RL+ +EG++ + + + R ++ E S K P+ A+ Sbjct: 507 PVMYKKIAAHPSTLELYARRLISEGVMTEGEVDKAKADWRARLDAEFEAGTSYK-PNKAD 565 >gi|115523536|ref|YP_780447.1| transketolase domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115517483|gb|ABJ05467.1| transketolase subunit A [Rhodopseudomonas palustris BisA53] Length = 273 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 8/154 (5%) Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 +G+ G+ + T G + G +G + + TG A+A + +R+D V DG +G Sbjct: 99 QGRLGAHPDYGTP-GIHASTGSLGHGLGIATGQAYAERLKRTDVTIFVVLSDGEFQEGST 157 Query: 198 YESFNIAALWNL-NVIYVIENNQYAMGTSVSRA-SAQTNFSKRGVSFNIPGMQVDGMDIR 255 +E+ +A L N++ ++NN ++ +S A + +F ++VDG D Sbjct: 158 WEAMLMAGNLKLSNLVAFMDNNDFSGLERMSEGHQAFYPLPDKARAFGWEAIEVDGHD-- 215 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 +A MD A+A R P+++ T + +G S Sbjct: 216 --EAQMDAAMA-AREGGKPLLLICKTIKGKGVSF 246 >gi|15926993|ref|NP_374526.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus N315] gi|81781609|sp|Q99U74|ODO1_STAAN RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|13701210|dbj|BAB42505.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus subsp. aureus N315] gi|32399940|emb|CAD92217.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399942|emb|CAD92218.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399944|emb|CAD92219.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399946|emb|CAD92220.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399948|emb|CAD92221.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399950|emb|CAD92222.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399952|emb|CAD92223.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399954|emb|CAD92224.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399956|emb|CAD92225.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399958|emb|CAD92226.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399960|emb|CAD92227.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399962|emb|CAD92228.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] Length = 910 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 12/188 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 327 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 386 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 387 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 446 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKII---NNSVEFAQSDKEP 353 +R HD +E V K+L++ SE ++ V+K + ++ + A P Sbjct: 447 PVPYQNIRK-HDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKMDNP 505 Query: 354 D---PAEL 358 D PAEL Sbjct: 506 DMEKPAEL 513 >gi|288870841|ref|ZP_06115477.2| transketolase [Clostridium hathewayi DSM 13479] gi|288865720|gb|EFC98018.1| transketolase [Clostridium hathewayi DSM 13479] Length = 264 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 7/152 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G VS GIA A K R+ D GDG +G V+E+ A L N+ +++ Sbjct: 109 GSLGLGVSTACGIALAGKVRKKDYHVYAILGDGELQEGIVWEAMTAAVHHKLDNMTVIVD 168 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + V + N + + + ++ DG D A +D A+A R + P+ Sbjct: 169 LNGLQIDGPVEKVMGLGNLKGKFLDYGFKVVEADGHDF----AALDAAIA-VRENGVPVC 223 Query: 277 IEMLTYRYRGHS-MSDPANYRTREEINEMRSN 307 I T + +G S M + A + ++ E N Sbjct: 224 ILAKTVKGKGVSFMENQAGWHGQKVSGEDYKN 255 >gi|228996461|ref|ZP_04156101.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus mycoides Rock3-17] gi|228763291|gb|EEM12198.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus mycoides Rock3-17] Length = 961 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 7/135 (5%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 353 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAIGFTTDSYDSRSTKY 412 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 413 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 472 Query: 294 NYRTREEINEMRSNH 308 T+ ++ + NH Sbjct: 473 --VTQPQVYKKIKNH 485 >gi|319400769|gb|EFV88988.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus epidermidis FRI909] Length = 934 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 21/164 (12%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ +L + +++I NN+ T + T S Sbjct: 352 MPIIIHGDAAYPGQGINFETMNLGSLKGYSTGGSLHIITNNRIGFTTEPFDGRSTTYSSD 411 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 +++P + V+ D+ A ++ A+ + + ++I+++ YR GH+ M +P+ Sbjct: 412 VAKGYDVPILHVNADDVEATIEAIEIAMEFRKEFHKDVVIDLVGYRRYGHNEMDEPS--- 468 Query: 297 TREEINEMRSNHDPIEQVRKR-----LLHNKWASEGDLKEIEMN 335 +N P + +RK L K EG + E EMN Sbjct: 469 --------ITNPVPYQNIRKHDSVEILYGKKLVDEGIISEDEMN 504 >gi|299067321|emb|CBJ38518.1| 2-oxoglutarate dehydrogenase E1 component [Ralstonia solanacearum CMR15] Length = 953 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 11/132 (8%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A + RR DK + V GD A A QG V E+ N+A I+++ NNQ Sbjct: 343 ARQERRGDKTGEQVLAVQVHGDAAFAGQGVVMETLNLAQTRGYGTGGTIHIVINNQIGFT 402 Query: 224 TSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 TS R S T + V P + V+G D AV M A+ + K + ++++ + Sbjct: 403 TSDPRDSRSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAMQLAIDFRTEFKKDVAVDIICF 462 Query: 283 RYRGHSMSD-PA 293 R GH+ D PA Sbjct: 463 RKLGHNEQDTPA 474 >gi|262039406|ref|ZP_06012716.1| transketolase [Leptotrichia goodfellowii F0264] gi|261746576|gb|EEY34105.1| transketolase [Leptotrichia goodfellowii F0264] Length = 269 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/106 (22%), Positives = 54/106 (50%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV-IE 216 G++G +S+G G+A K ++ + V GDG +GQ++E A +NLN + V ++ Sbjct: 112 GLLGQGLSIGIGMALGKKLKKDNSKVYVIIGDGEMQEGQIWEGLMSGAHYNLNNLTVFLD 171 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N+ + V++ + +F ++++G + +K +++ Sbjct: 172 YNKLSSKNDVNKTMNLEPIKDKIEAFGWNAIEINGHEFNEIKKSIE 217 >gi|187928190|ref|YP_001898677.1| 2-oxoglutarate dehydrogenase E1 component [Ralstonia pickettii 12J] gi|187725080|gb|ACD26245.1| 2-oxoglutarate dehydrogenase, E1 subunit [Ralstonia pickettii 12J] Length = 954 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 10/129 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A + RR DK + V GD A A QG V E+ N+A I+++ NNQ Sbjct: 343 ARQERRDDKHGAQVLAVQVHGDAAFAGQGVVMETLNLAQTRGYGTGGTIHIVINNQIGFT 402 Query: 224 TSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 TS R S T + V P + V+G D AV M AV + + I ++++ + Sbjct: 403 TSDPRDSRSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAMQLAVDFRTEFQKDIAVDIICF 462 Query: 283 RYRGHSMSD 291 R GH+ D Sbjct: 463 RKLGHNEQD 471 >gi|229008185|ref|ZP_04165708.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus mycoides Rock1-4] gi|228753082|gb|EEM02597.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus mycoides Rock1-4] Length = 961 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 7/135 (5%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A QG V E+ N++ L I+VI NN T + + Sbjct: 353 SKSFVILVHGDAAFPGQGIVSETLNLSRLNAYQTGGTIHVIANNAIGFTTDSYDSRSTKY 412 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 S F+IP + V+ D A A + A+ Y K +I+++ YR GH+ M DPA Sbjct: 413 SSDLAKGFDIPIVHVNADDPEACLAAANLAIQYRMLFKKDFLIDLIGYRRYGHNEMDDPA 472 Query: 294 NYRTREEINEMRSNH 308 T+ ++ + NH Sbjct: 473 --VTQPQVYKKIKNH 485 >gi|57866887|ref|YP_188564.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus epidermidis RP62A] gi|242242694|ref|ZP_04797139.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus epidermidis W23144] gi|81674620|sp|Q5HPC6|ODO1_STAEQ RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|57637545|gb|AAW54333.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus epidermidis RP62A] gi|242233830|gb|EES36142.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus epidermidis W23144] Length = 934 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 21/164 (12%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ +L + +++I NN+ T + T S Sbjct: 352 MPIIIHGDAAYPGQGINFETMNLGSLKGYSTGGSLHIITNNRIGFTTEPFDGRSTTYSSD 411 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 +++P + V+ D+ A ++ A+ + + ++I+++ YR GH+ M +P+ Sbjct: 412 VAKGYDVPILHVNADDVEATIEAIEIAMEFRKEFHKDVVIDLVGYRRYGHNEMDEPS--- 468 Query: 297 TREEINEMRSNHDPIEQVRKR-----LLHNKWASEGDLKEIEMN 335 +N P + +RK L K EG + E EMN Sbjct: 469 --------ITNPVPYQNIRKHDSVEILYGKKLVDEGIISEDEMN 504 >gi|329663410|ref|NP_001192767.1| probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial [Bos taurus] Length = 921 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 22/185 (11%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + +++I NNQ T R + S Sbjct: 327 ICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSVHLIVNNQLGYTTPAERGRSSLYCSD 386 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G V A Y R + +I+++L YR GH+ ++ Sbjct: 387 IGKLVGCAIIHVNGDSPEEVVRAAQLAFEYQRQFRKDVIVDLLCYRQWGHNELDEPFFTN 446 Query: 292 PANY---RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 P Y R R+ I +M + + L+ N ++ ++ EI+ + +N + A Sbjct: 447 PGMYQIIRARKSIPDMYAEY---------LMANGLTTQEEVSEIKASYYVKLNGHLTHAA 497 Query: 349 SDKEP 353 + P Sbjct: 498 HYRPP 502 >gi|115526232|ref|YP_783143.1| transketolase, central region [Rhodopseudomonas palustris BisA53] gi|115520179|gb|ABJ08163.1| Transketolase, central region [Rhodopseudomonas palustris BisA53] Length = 645 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 1/128 (0%) Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ + G H G G +G +S G+ AN+ S V GDG + Sbjct: 112 GLRRLDGLPGHPDIGTPGLVTNTGSLGMGISKAKGMLAANRLHGSSGRVFVLTGDGELQE 171 Query: 195 GQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 GQ++ES AA N+ ++++N++ SV R S+ + + SF ++DG D Sbjct: 172 GQIWESLISAANHGTGNLTVIVDHNKFQSDFSVERTSSLGDLDAKFRSFGWHVARIDGHD 231 Query: 254 IRAVKATM 261 A+ AT Sbjct: 232 TDALAATF 239 >gi|313837651|gb|EFS75365.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL037PA2] gi|314927468|gb|EFS91299.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL044PA1] gi|314972591|gb|EFT16688.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL037PA3] gi|328907554|gb|EGG27320.1| alpha-ketoglutarate decarboxylase [Propionibacterium sp. P08] Length = 1259 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+V+ NNQ TS + T + Sbjct: 675 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVLVNNQVGFTTSPRDGRSSTYCTD 734 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A AY + ++++++ YR RGH+ D ++ Sbjct: 735 VAKAVGAPVLHVNGDDPASVVHAARIAYAYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 792 >gi|297481420|ref|XP_002692095.1| PREDICTED: dehydrogenase E1 and transketolase domain containing 1-like [Bos taurus] gi|296481535|gb|DAA23650.1| dehydrogenase E1 and transketolase domain containing 1-like [Bos taurus] Length = 921 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 22/185 (11%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + +++I NNQ T R + S Sbjct: 327 ICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSVHLIVNNQLGYTTPAERGRSSLYCSD 386 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G V A Y R + +I+++L YR GH+ ++ Sbjct: 387 IGKLVGCAIIHVNGDSPEEVVRAAQLAFEYQRQFRKDVIVDLLCYRQWGHNELDEPFFTN 446 Query: 292 PANY---RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 P Y R R+ I +M + + L+ N ++ ++ EI+ + +N + A Sbjct: 447 PGMYQIIRARKSIPDMYAEY---------LMANGLTTQEEVSEIKASYYVKLNGHLTHAA 497 Query: 349 SDKEP 353 + P Sbjct: 498 HYRPP 502 >gi|251810845|ref|ZP_04825318.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus epidermidis BCM-HMP0060] gi|282876148|ref|ZP_06285015.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus epidermidis SK135] gi|251805680|gb|EES58337.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus epidermidis BCM-HMP0060] gi|281295173|gb|EFA87700.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus epidermidis SK135] gi|329732915|gb|EGG69260.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus epidermidis VCU028] Length = 934 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 21/164 (12%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ +L + +++I NN+ T + T S Sbjct: 352 MPIIIHGDAAYPGQGINFETMNLGSLKGYSTGGSLHIITNNRIGFTTEPIDGRSTTYSSD 411 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 +++P + V+ D+ A ++ A+ + + ++I+++ YR GH+ M +P+ Sbjct: 412 VAKGYDVPILHVNADDVEATIEAIEIAMEFRKEFHKDVVIDLVGYRRYGHNEMDEPS--- 468 Query: 297 TREEINEMRSNHDPIEQVRKR-----LLHNKWASEGDLKEIEMN 335 +N P + +RK L K EG + E EMN Sbjct: 469 --------ITNPVPYQNIRKHDSVEILYGKKLVDEGIISEDEMN 504 >gi|169622250|ref|XP_001804534.1| hypothetical protein SNOG_14343 [Phaeosphaeria nodorum SN15] gi|160704731|gb|EAT78214.2| hypothetical protein SNOG_14343 [Phaeosphaeria nodorum SN15] Length = 998 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 17/197 (8%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYE+ +L + + I++I NNQ T + + S Sbjct: 423 ILLHGDAAFAGQGIVYETMGFHSLPSYHTGGTIHIIVNNQIGFTTDPRFSRSTPYCSDIA 482 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+G D+ A+ A + K ++I+M+ YR GH+ +D + Sbjct: 483 KAIDAPVFHVNGDDVEALNFVCQLAADFRAEFKKDVVIDMVCYRKSGHNETDQPFFTQPL 542 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII----NNSVEFAQSDKE--- 352 ++ ++ +LL K ++ D+ E + V ++ N S ++ + KE Sbjct: 543 MYKKIAEQKPTLDIYTNKLLEEKTFTKEDIDEHKAWVWGMLDESFNRSKDYQPTAKEWLT 602 Query: 353 ------PDPAELYSDIL 363 P EL +++L Sbjct: 603 SAWNGFKSPKELATEVL 619 >gi|300726899|ref|ZP_07060327.1| transketolase [Prevotella bryantii B14] gi|299775846|gb|EFI72428.1| transketolase [Prevotella bryantii B14] Length = 274 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 2/112 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G++ A K + D V GDG +G +YE+ A + L N++ I+ Sbjct: 114 GALGHGLSVGVGMSLAGKLDKKDYHVYVVMGDGEQAEGSIYEAAMAANKYKLDNLVAFID 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 N + S + +R +F + G +I VKA +D AV Y Sbjct: 174 RNGLQISGSTEDVMPLESIEERWTAFGWDVKTIHGDNIEEVKAALD-AVDYS 224 >gi|294660390|ref|NP_853134.2| 1-deoxy-D-xylulose-5-phosphate synthase [Mycoplasma gallisepticum str. R(low)] gi|284812048|gb|AAP56702.2| 1-deoxy-D-xylulose-5-phosphate synthase [Mycoplasma gallisepticum str. R(low)] gi|284930617|gb|ADC30556.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mycoplasma gallisepticum str. R(high)] Length = 581 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/159 (21%), Positives = 76/159 (47%), Gaps = 15/159 (9%) Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 + G G + +K +Y G G +S+ +G+ F+N+ +++ + GDG+ G Sbjct: 94 TNGLSGLQDLNESKYDYYAG-GHTSNSLSVASGLVFSNQLLDKEQLIIPVIGDGSIANGI 152 Query: 197 VYESFNIAALWNLNVIYVIENNQYAMGTS--------VSRASAQTNFSKRGVSFNIPGMQ 248 +E+ N + + +I ++ +NQ ++ + + Q NF K+ N ++ Sbjct: 153 AFEAINNISFHHHKMIIILNDNQMSISENFGEFNKLLTNLKDDQANFFKQ---LNYEYLK 209 Query: 249 V-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + DG D+ + A ++KA + + P+I+ + T + +G Sbjct: 210 IEDGHDLDQIFAGLEKAKELVK--QKPVIVHVKTIKGKG 246 >gi|27468015|ref|NP_764652.1| alpha-ketoglutarate decarboxylase [Staphylococcus epidermidis ATCC 12228] gi|293366619|ref|ZP_06613296.1| 2-oxoglutarate dehydrogenase [Staphylococcus epidermidis M23864:W2(grey)] gi|81842841|sp|Q8CP83|ODO1_STAES RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|27315560|gb|AAO04694.1|AE016747_191 2-oxoglutarate dehydrogenase E1 [Staphylococcus epidermidis ATCC 12228] gi|291319388|gb|EFE59757.1| 2-oxoglutarate dehydrogenase [Staphylococcus epidermidis M23864:W2(grey)] gi|329735224|gb|EGG71516.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus epidermidis VCU045] Length = 934 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 21/164 (12%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ +L + +++I NN+ T + T S Sbjct: 352 MPIIIHGDAAYPGQGINFETMNLGSLKGYSTGGSLHIITNNRIGFTTEPIDGRSTTYSSD 411 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 +++P + V+ D+ A ++ A+ + + ++I+++ YR GH+ M +P+ Sbjct: 412 VAKGYDVPILHVNADDVEATIEAIEIAMEFRKEFHKDVVIDLVGYRRYGHNEMDEPS--- 468 Query: 297 TREEINEMRSNHDPIEQVRKR-----LLHNKWASEGDLKEIEMN 335 +N P + +RK L K EG + E EMN Sbjct: 469 --------ITNPVPYQNIRKHDSVEILYGKKLVDEGIISEDEMN 504 >gi|322421128|ref|YP_004200351.1| 2-oxoglutarate dehydrogenase, E1 subunit [Geobacter sp. M18] gi|320127515|gb|ADW15075.1| 2-oxoglutarate dehydrogenase, E1 subunit [Geobacter sp. M18] Length = 897 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 5/175 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A + QG V E+ N++ L ++++ NNQ TS + A + + Sbjct: 322 LPLLIHGDAAFSGQGVVAETLNLSQLAGYRTGGTLHIVLNNQIGFTTSAADARSSHYATD 381 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 P V G D AV + AV+Y ++ +++E++ YR GH+ D Y T Sbjct: 382 AAKMVQAPVFHVYGDDPEAVVHVTELAVSYRDRYRKDVVVEVICYRRHGHNEGD-EPYFT 440 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 + + + + + + L + +E +LK IE V + + + E A + E Sbjct: 441 QPLMYQQIKLRPQLHSLYELELLAEGVAEEELKVIENEVVQRLTQAGERAAAPAE 495 >gi|328943522|ref|ZP_08240987.1| transketolase [Atopobium vaginae DSM 15829] gi|327491491|gb|EGF23265.1| transketolase [Atopobium vaginae DSM 15829] Length = 318 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G SL GIA+A K + S + + GDG N+GQ +E+F A L+ I I+ Sbjct: 125 GSLGQGTSLAAGIAYALKKKNSSRNTYLFVGDGELNEGQCWEAFEFIAAHRLDRCIVFID 184 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 +N+ + ++ + +F +V+G DI A+ + +A Sbjct: 185 DNKKQLDGRTKDILDPFDYVDKMRAFGFYTQKVNGQDIIALDEAITRA 232 >gi|289578769|ref|YP_003477396.1| transketolase [Thermoanaerobacter italicus Ab9] gi|289528482|gb|ADD02834.1| Transketolase [Thermoanaerobacter italicus Ab9] Length = 281 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 2/126 (1%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G ++LG G+A A K + + V GDG +G +E+ AA + L N Sbjct: 114 GVEANTGSLGHGIALGVGMALAAKIDKKEYRVFVITGDGELQEGSNWETAMTAAYYGLDN 173 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +I +++ N +G + K+ SF +DG DI + +K + + + Sbjct: 174 LIVIVDRNMLQLGDFTKNITRLEPLDKKWKSFGWGVEIIDGHDIEKLLTAFNK-IPFVKG 232 Query: 271 HKGPII 276 II Sbjct: 233 QPSVII 238 >gi|329729360|gb|EGG65766.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus epidermidis VCU144] Length = 934 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 21/164 (12%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ +L + +++I NN+ T + T S Sbjct: 352 MPIIIHGDAAYPGQGINFETMNLGSLKGYSTGGSLHIITNNRIGFTTEPIDGRSTTYSSD 411 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 +++P + V+ D+ A ++ A+ + + ++I+++ YR GH+ M +P+ Sbjct: 412 VAKGYDVPILHVNADDVEATIEAIEIAMEFRKEFHKDVVIDLVGYRRYGHNEMDEPS--- 468 Query: 297 TREEINEMRSNHDPIEQVRKR-----LLHNKWASEGDLKEIEMN 335 +N P + +RK L K EG + E EMN Sbjct: 469 --------ITNPVPYQNIRKHDSVEILYGKKLVDEGIISEDEMN 504 >gi|212542331|ref|XP_002151320.1| alpha-ketoglutarate dehydrogenase complex subunit Kgd1, putative [Penicillium marneffei ATCC 18224] gi|210066227|gb|EEA20320.1| alpha-ketoglutarate dehydrogenase complex subunit Kgd1, putative [Penicillium marneffei ATCC 18224] Length = 1063 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 4/116 (3%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ AL + ++++ NNQ T A + S Sbjct: 442 VLLHGDAAFAAQGVVYETMGFHALPAYSTGGTVHIVVNNQIGFTTDPRFARSTPYCSDIA 501 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + + P V+G D+ AV A + K ++I+++ YR +GH+ +D ++ Sbjct: 502 KAIDAPVFHVNGDDVEAVNYVCQIAADWRAEFKRDVVIDIVCYRKQGHNETDQPSF 557 >gi|146296373|ref|YP_001180144.1| transketolase domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409949|gb|ABP66953.1| transketolase subunit A [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 282 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 76/166 (45%), Gaps = 15/166 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A A K + V GDG +GQ++E+ AA + L N+ ++ Sbjct: 118 GSLGQGLSVANGMALAGKLDEKNYRVYVLLGDGEIQEGQIWEAAMTAAHYKLDNLTAFLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + ++ + ++ +F +++DG D + +KAV + KG P Sbjct: 178 HNGLQIDGKITEVMSPEPVDEKFRAFGWHVIKIDGHDFNQI----EKAVNEAKTIKGKPT 233 Query: 276 IIEMLTYRYRGHSMSD---------PANYRTREEINEMRSNHDPIE 312 II T + +G S + P + ++ + E++ ++ +E Sbjct: 234 IIIAETVKGKGVSFMENEVGWHGTAPNKEQAQKALEELQKQYEALE 279 >gi|86138989|ref|ZP_01057560.1| 2-oxoglutarate dehydrogenase, E1 component [Roseobacter sp. MED193] gi|85824220|gb|EAQ44424.1| 2-oxoglutarate dehydrogenase, E1 component [Roseobacter sp. MED193] Length = 983 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/188 (19%), Positives = 83/188 (44%), Gaps = 5/188 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R+ + ++ GD A A QG V E F ++ L ++++ NNQ T+ + Sbjct: 379 NDADRTKVLSILLHGDAAFAGQGVVAECFALSGLKGHKTGGTMHIVVNNQIGFTTAPHFS 438 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D AV A + + +++++ YR GH+ Sbjct: 439 RSSPYPTDNALVVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVLDIFCYRRFGHNE 498 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + +++ + + +RL+ + EG++++++ + + +N E + Sbjct: 499 GDEPMFTNPLMYKKIKGHKTTLSLYTERLVKDGLIPEGEIEDMKASFQAHLNEEFEIGK- 557 Query: 350 DKEPDPAE 357 D +P+ A+ Sbjct: 558 DYKPNKAD 565 >gi|308234240|ref|ZP_07664977.1| transketolase subunit A [Atopobium vaginae DSM 15829] Length = 311 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G SL GIA+A K + S + + GDG N+GQ +E+F A L+ I I+ Sbjct: 118 GSLGQGTSLAAGIAYALKKKNSSRNTYLFVGDGELNEGQCWEAFEFIAAHRLDRCIVFID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 +N+ + ++ + +F +V+G DI A+ + +A Sbjct: 178 DNKKQLDGRTKDILDPFDYVDKMRAFGFYTQKVNGQDIIALDEAITRA 225 >gi|238019420|ref|ZP_04599846.1| hypothetical protein VEIDISOL_01289 [Veillonella dispar ATCC 17748] gi|237864119|gb|EEP65409.1| hypothetical protein VEIDISOL_01289 [Veillonella dispar ATCC 17748] Length = 278 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 4/130 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K +D GDG +GQV+E+ A + L N+ ++ Sbjct: 121 GSLGQGISAACGMALAGKIDNADYRVYSILGDGELEEGQVWEAAMFAGHYKLNNLTAFVD 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + +++ + ++ +FN ++V+G D+ + ++ A A+ +GP Sbjct: 181 FNGLQIDGDITKVLSPLPIPEKFKAFNWNVIEVNGHDLDELHNAIESAKAFT---EGPTC 237 Query: 277 IEMLTYRYRG 286 I M T + +G Sbjct: 238 IVMHTVKGKG 247 >gi|319943659|ref|ZP_08017940.1| 2-oxoglutarate dehydrogenase E1 component [Lautropia mirabilis ATCC 51599] gi|319742892|gb|EFV95298.1| 2-oxoglutarate dehydrogenase E1 component [Lautropia mirabilis ATCC 51599] Length = 953 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 13/143 (9%) Query: 159 IVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV- 211 IVG V G A + RR D+ + VV GD A A QG V E+ N+ + Sbjct: 330 IVGPVVE---GSTKARQVRRGDRDGSDVLSVVVHGDAAFAGQGVVMETLNLTETRGYSTR 386 Query: 212 --IYVIENNQYAMGTSVSRASAQTNFSKRGV-SFNIPGMQVDGMDIRAVKATMDKAVAYC 268 ++++ NNQ TS +R S T + V S P V+G D AV A+ Y Sbjct: 387 GTVHLVINNQIGFTTSDTRDSRSTLYCTDVVKSIEAPVFHVNGDDPEAVVFVTKLALDYR 446 Query: 269 RAHKGPIIIEMLTYRYRGHSMSD 291 + ++++++ +R GH+ D Sbjct: 447 MKFRKDVVVDIVCFRKLGHNEQD 469 >gi|254462529|ref|ZP_05075945.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Rhodobacterales bacterium HTCC2083] gi|206679118|gb|EDZ43605.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Rhodobacteraceae bacterium HTCC2083] Length = 986 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/188 (20%), Positives = 84/188 (44%), Gaps = 5/188 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R + ++ GD A A QG V E F ++ L ++++ NNQ T+ + Sbjct: 379 NDKERIKVMPILLHGDAAFAGQGVVAECFALSGLRGHKTGGTMHIVVNNQIGFTTAPHFS 438 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D AV A + + ++I+++ YR GH+ Sbjct: 439 RSSPYPTDNALVVESPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDIICYRRFGHNE 498 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + +++++ + +RL+ + EG++++++ + +N+ E A Sbjct: 499 GDEPMFTNPVMYKKIKTHKTTLSLYTERLVKDGLIPEGEIEDMKTAFQAHLNDEFE-AGK 557 Query: 350 DKEPDPAE 357 D +P+ A+ Sbjct: 558 DYKPNKAD 565 >gi|312135742|ref|YP_004003080.1| transketolase domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311775793|gb|ADQ05280.1| Transketolase domain-containing protein [Caldicellulosiruptor owensensis OL] Length = 282 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A A K V GDG +GQ++E+ AA + L N+ ++ Sbjct: 118 GSLGQGLSVANGMALAGKLDGKSYRVYVLLGDGEIQEGQIWEAAMTAAHYKLDNLTAFLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + ++ + ++ +F +++DG D + +KAVA + KG P Sbjct: 178 HNGLQIDGKITEVMSPEPVDEKFKAFGWHVIKIDGHDFNQI----EKAVAEAKTIKGKPT 233 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRL 318 II T + +G S M + A + E +E+++K+L Sbjct: 234 IIIAETVKGKGVSFMENEAGWHGTAPNKEQAQK--ALEELQKQL 275 >gi|149913126|ref|ZP_01901660.1| 2-oxoglutarate dehydrogenase, E1 component [Roseobacter sp. AzwK-3b] gi|149813532|gb|EDM73358.1| 2-oxoglutarate dehydrogenase, E1 component [Roseobacter sp. AzwK-3b] Length = 986 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 5/188 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R+ + V+ GD A A QG V E F ++ L ++++ NNQ T+ + Sbjct: 379 NDSERTSVLPVLLHGDAAFAGQGVVAECFGLSGLKGHKTGGTMHIVVNNQIGFTTAPHFS 438 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D AV A + + + ++I+++ YR GH+ Sbjct: 439 RSSPYPTDIALMVEAPIFHVNGDDPEAVVHAAKVATEFRQKFQKDVVIDIICYRRFGHNE 498 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + N+++ + +RL+ + EG++++++ + + + E A Sbjct: 499 GDEPMFTNPVMYNKIKKQKTTLSLYTERLVADGLIPEGEIEDMKAAFQSFLADEFE-AGK 557 Query: 350 DKEPDPAE 357 + P+ A+ Sbjct: 558 EYRPNKAD 565 >gi|33240729|ref|NP_875671.1| transketolase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238257|gb|AAQ00324.1| Transketolase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 268 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 21/135 (15%) Query: 147 FSTKNGFYGGH-------------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 F N +GGH G +G +S+ G AFA+ + + ICV+ GDG N Sbjct: 87 FYLDNSSFGGHPKKGSSSSITWSTGSLGHGLSITLGKAFASPNK--NFICVL--GDGETN 142 Query: 194 QGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 +G V+E+ + L NV+ +I+NN+ T + N + R F + +++DG Sbjct: 143 EGSVWEALMFMSQHKLTNVLVIIDNNKQESLTFTDDILSIENLNDRLKGFGLKALRIDGH 202 Query: 253 DIRAVKATMDKAVAY 267 D + +D ++Y Sbjct: 203 DHEQI---LDNLLSY 214 >gi|145639182|ref|ZP_01794789.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae PittII] gi|145271744|gb|EDK11654.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae PittII] Length = 935 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 345 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 404 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 405 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 464 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ N R ++N Sbjct: 465 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEAVITEEQVIEMANNYRDALDNGDRVVS 524 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 525 EWREMDAAKM 534 >gi|114321756|ref|YP_743439.1| 2-oxoglutarate dehydrogenase E1 component [Alkalilimnicola ehrlichii MLHE-1] gi|114228150|gb|ABI57949.1| 2-oxoglutarate dehydrogenase E1 component [Alkalilimnicola ehrlichii MLHE-1] Length = 941 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDKI-----CVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQ 219 G A A +RR D + V+ GD A A QG V E+F ++ + ++++ NNQ Sbjct: 334 GSARARMHRRRDHVGAEVLPVLIHGDAAFAGQGVVMETFQLSQARGFYTGGTVHIVINNQ 393 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS + T + ++ P V+G D AV A+ Y +A ++I+ Sbjct: 394 IGFTTSNPLDTRSTVYCTEVAKMIQAPIFHVNGDDPDAVAFVTQLALDYRQAFNRDVVID 453 Query: 279 MLTYRYRGHSMSD 291 M+ +R GH+ +D Sbjct: 454 MVCFRRHGHNEAD 466 >gi|312113431|ref|YP_004011027.1| 2-oxoglutarate dehydrogenase, E1 subunit [Rhodomicrobium vannielii ATCC 17100] gi|311218560|gb|ADP69928.1| 2-oxoglutarate dehydrogenase, E1 subunit [Rhodomicrobium vannielii ATCC 17100] Length = 989 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 82/200 (41%), Gaps = 15/200 (7%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY---RRSDKICVVCFGDGA-ANQGQ 196 G S+H+ T N H + V LG A ++ RS+ + ++ GD A A QG Sbjct: 349 GNSVHLSLTANP---SHLEIVDPVVLGKVRAKQDQLGDKTRSEVLPLLMHGDAAFAGQGV 405 Query: 197 VYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 V E F ++ L I+ I NNQ T+ + + S P V+G D Sbjct: 406 VAECFGLSGLKGHRTGGSIHFIVNNQIGFTTAPRFSRSSPYPSDIARMIEAPIFHVNGDD 465 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 AV A + + P++I+M+ YR GH+ D ++ ++R + Sbjct: 466 PEAVVYCARVATEFRQRFHKPVVIDMICYRRHGHNEGDEPSFTQPLMYKKIRQQQSVVSI 525 Query: 314 VRKRLLHNKWASEGDLKEIE 333 KRL A E +KE E Sbjct: 526 YSKRL-----ADENLVKEEE 540 >gi|282916680|ref|ZP_06324438.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus D139] gi|282319167|gb|EFB49519.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus D139] Length = 932 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGKLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +R HD +E V + K +EG + E EM+ Sbjct: 469 PVPYQNIRK-HDSVEYVFGK----KLVNEGVISEDEMH 501 >gi|256425789|ref|YP_003126442.1| 2-oxoglutarate dehydrogenase E1 component [Chitinophaga pinensis DSM 2588] gi|256040697|gb|ACU64241.1| 2-oxoglutarate dehydrogenase, E1 subunit [Chitinophaga pinensis DSM 2588] Length = 916 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 10/165 (6%) Query: 180 DKIC-VVCFGDGA-ANQGQVYESF---NIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 DKI ++ GD A A QG +YE N+ + ++++ NNQ T A + Sbjct: 331 DKILPILIHGDAAVAGQGVIYELLQMSNLKGYYTGGTMHLVINNQIGFTTDFDDARSSDY 390 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + + P V+G D AV + + Y + I I++L YR GH+ D Sbjct: 391 CTSIASTVQAPVFHVNGDDAEAVVKVAEISARYRQEFNSDIFIDLLCYRKHGHNEGDEPK 450 Query: 295 YRTREEINEMRSNH-DPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + T+ + + H +P E ++LL A E +++E+ + K Sbjct: 451 F-TQPSLYALIDKHPNPREVYTQKLLQ---AGEVEVQELAKQMEK 491 >gi|303311281|ref|XP_003065652.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105314|gb|EER23507.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] Length = 1063 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 17/197 (8%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T A + S Sbjct: 442 VLLHGDAAFAAQGIVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRFARSTPYCSDIA 501 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + P V+ D+ AV A + K ++I+++ YR +GH+ +D + Sbjct: 502 KAIEAPVFHVNADDVEAVNFVCQLAADWRAQFKSDVVIDIVCYRKQGHNETDQPAFTQPL 561 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV----EFAQSDKE--- 352 + +++ +LL ++ D++E + V ++N+S E+ + +E Sbjct: 562 MYKRIADQTTQLDKYVNKLLQENTFTKEDIEEHKKWVWGMLNDSFDRSKEYQPTSREWLT 621 Query: 353 ------PDPAELYSDIL 363 P EL +++L Sbjct: 622 SAWNGFKSPKELATEVL 638 >gi|229586423|ref|YP_002844924.1| 2-oxoglutarate dehydrogenase E1 component [Rickettsia africae ESF-5] gi|228021473|gb|ACP53181.1| 2-oxoglutarate dehydrogenase E1 component [Rickettsia africae ESF-5] Length = 928 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L ++ ++ + NNQ + + +RAS Sbjct: 340 KRSKVKAILVHGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRAS 399 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV + AV Y + I++E++ YR GH+ Sbjct: 400 RYSTEFAKIIAA---PILHVNGDDIEAVLKATNIAVEYRQKFGKDIVVEIICYRKYGHNE 456 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N +++ P Sbjct: 457 GDEPMYTQGKMYNIIKNKLTP 477 >gi|298345519|ref|YP_003718206.1| 2-oxoglutarate decarboxylase [Mobiluncus curtisii ATCC 43063] gi|298235580|gb|ADI66712.1| 2-oxoglutarate decarboxylase [Mobiluncus curtisii ATCC 43063] Length = 1249 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A QG VYE+ N++ L +++I NNQ TS + A + + Sbjct: 661 LPVLIHGDAAFIGQGVVYETLNMSQLKAYTTGGTVHIIVNNQIGFTTSPTNARSTNYCTD 720 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 +P V+ D V A + + +II+++ YR RGH SM+ Sbjct: 721 LAKGLQVPIFHVNADDPEMVTRVAGLAYRFQQKFHKDVIIDLICYRRRGHNEGDDPSMTQ 780 Query: 292 PANY 295 P Y Sbjct: 781 PVMY 784 >gi|313239402|emb|CBY14341.1| unnamed protein product [Oikopleura dioica] Length = 986 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 8/183 (4%) Query: 176 YRRSDK----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 YR D+ + ++ GD A A QG VYE+ +++ L +V I+++ NNQ T Sbjct: 381 YRNDDEGKTVVPMLLHGDAAFAGQGVVYETLHLSHLPFYSVGGAIHLVCNNQIGFTTDPR 440 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + A + G N P V+ D AV A + + ++I+++ YR GH Sbjct: 441 HSRASPYCTDVGRVVNAPIFHVNADDPDAVVYVSKVAAEFRQTFSTDVVIDLIGYRRHGH 500 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 + D + ++ + + +++ L + D++E+ KI +++ A Sbjct: 501 NEIDEPMFTQPRMYQAIKKHKNVLDKYGDSLKEQGVVDDVDIQELIAQYEKICEDALAKA 560 Query: 348 QSD 350 +++ Sbjct: 561 KTE 563 >gi|227537997|ref|ZP_03968046.1| (pyruvate) oxoisovalerate dehydrogenase alpha and beta fusion [Sphingobacterium spiritivorum ATCC 33300] gi|227242073|gb|EEI92088.1| (pyruvate) oxoisovalerate dehydrogenase alpha and beta fusion [Sphingobacterium spiritivorum ATCC 33300] Length = 806 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 64/307 (20%), Positives = 122/307 (39%), Gaps = 45/307 (14%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA-----SKIMAELTGRQGGISKGKG 141 G+E + + EGD YR+ + A G+ S++ A S G+ Sbjct: 60 GKELAQIALAKVFREGDWRSGYYRDQTFVFASGISTVYHFFSQLYAHPDLEADPSSGGRQ 119 Query: 142 GSMHMFSTKNGFYGGH--------------GIVGAQVSLGTGIAFANKYRR--------- 178 + H FST+ G+ G Q+S G+ A+K R Sbjct: 120 MNCH-FSTRQIDEDGNWFNQMQQKNSASDISTTGGQMSRIMGLGLASKLYRHNPDLNHLS 178 Query: 179 --SDKICVVCF---GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 SDK V F G+ + ++G E+ N A + + V+ + ++ Y + + + Sbjct: 179 YFSDKGNEVVFCSVGNASTSEGVFLETINAAGVNQIPVVISVWDDGYGISVPNEVQTTKG 238 Query: 234 NFS--------KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY-RY 284 + S + G + +V+G D + T ++AV + R P ++ + + Sbjct: 239 DISEVLKGFQRQEGDTTGFEIFKVNGWDYAGLVETYEQAVRFAREEHVPCLVHVTELTQP 298 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +GHS S Y++ E + E D ++R+ +L + A+E +L +IE ++ + Sbjct: 299 QGHSTSGSHERYKSAERL-EWEHEFDCNVKMRQWILESDMATEEELNQIEAEAKEYVRTE 357 Query: 344 VEFAQSD 350 A +D Sbjct: 358 QRRAWTD 364 >gi|15602142|ref|NP_245214.1| alpha-ketoglutarate decarboxylase [Pasteurella multocida subsp. multocida str. Pm70] gi|12720508|gb|AAK02361.1| SucA [Pasteurella multocida subsp. multocida str. Pm70] Length = 931 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 75/328 (22%), Positives = 128/328 (39%), Gaps = 26/328 (7%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG----MGMVGGFCHLCIGQEAVIVG 94 LE FNKE++L + E G + + G + + +E V G Sbjct: 189 LESRVTQGFNKEEQLKFLEELTAADGLERYLGAKFPGAKRFSLEGSDSFILLMKEIVRHG 248 Query: 95 MKMSLTEGDQMITAYREHGHILA--CGVDASKIMAELTGRQGGISKG----KGGSMHMFS 148 + + E M A+R ++L G S++ E G+ G G G F Sbjct: 249 KRNGIDEI-AMGMAHRGRLNMLVNVLGKKPSELFDEFAGKHNGNGTGDVKYHQGFSSDFM 307 Query: 149 TKNG-------FYGGHGIVGAQVSLGTGIAFA---NKYRRSDKICVVCFGDGAA-NQGQV 197 T +G F H + + V +G+ A N + ++ + V GD A QG V Sbjct: 308 TDDGIVHLVLAFNPSHLEIVSPVVIGSVRARQKRINDHEKAKVLPVTVHGDSAVIGQGVV 367 Query: 198 YESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMD 253 E+ N++ +V I ++ NNQ TS + T + + P + V+G D Sbjct: 368 QETLNMSGTRGYSVGGTIRIVINNQIGFTTSNPHDTRSTEYCTDIAKMIEAPVIHVNGDD 427 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 AV AV Y K I I++++YR GH+ +D + + ++ + P + Sbjct: 428 PEAVAYAARMAVEYRTLFKRDIFIDLVSYRRHGHNEADEPSATQPLMYDRIKKHPTPRKV 487 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RL+ +E E+ N R ++ Sbjct: 488 YADRLIAQGVINEEAATELVNNYRDALD 515 >gi|221197211|ref|ZP_03570258.1| transketolase domain protein [Burkholderia multivorans CGD2M] gi|221203883|ref|ZP_03576901.1| transketolase domain protein [Burkholderia multivorans CGD2] gi|221176049|gb|EEE08478.1| transketolase domain protein [Burkholderia multivorans CGD2] gi|221183765|gb|EEE16165.1| transketolase domain protein [Burkholderia multivorans CGD2M] Length = 281 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 7/119 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +++ G K + SD F DG ++G ++E AA W L N+I +++ Sbjct: 121 GSLGQGLTIAVGRCLGLKRKGSDAFVYTLFSDGELDEGAIWEGLMSAAHWRLDNLIAIVD 180 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 NNQ A G S ++ A + +F +V+G DI AVK D A R H P Sbjct: 181 VNNQQADGPS-TQIMAFEPLVDKLEAFGWYVQRVNGNDIDAVKHAFDNA----RRHDRP 234 >gi|320335372|ref|YP_004172083.1| 2-oxoglutarate dehydrogenase, E1 subunit [Deinococcus maricopensis DSM 21211] gi|319756661|gb|ADV68418.1| 2-oxoglutarate dehydrogenase, E1 subunit [Deinococcus maricopensis DSM 21211] Length = 951 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 21/175 (12%) Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGAA 192 + GG MH+ F H + + V G+ A + RR D + + GD A Sbjct: 302 RTPGGPMHL---ALAFNPSHLEIVSPVVHGS--VRARQDRRGDTERRQVLPITVHGDAAV 356 Query: 193 N-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGM 247 + QG V E+ N++ L + ++ NNQ S R + + + N P + Sbjct: 357 SGQGVVMETLNLSRLRGFTTGGAVRIVINNQIGFTISDPRDTRSSRYCTDVAKIANAPVL 416 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSDPANYR 296 V+G D AV D A+ Y + + I++++YR GH +M+ P YR Sbjct: 417 HVNGDDPEAVVFAGDLALEYRQTFGKDVFIDLISYRRHGHNEGDDPTMTQPIMYR 471 >gi|304391075|ref|ZP_07373027.1| 2-oxoglutarate dehydrogenase E1 component [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325958|gb|EFL93204.1| 2-oxoglutarate dehydrogenase E1 component [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 1241 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A QG VYE+ N++ L +++I NNQ TS + A + + Sbjct: 653 LPVLIHGDAAFIGQGVVYETLNMSQLKAYTTGGTVHIIVNNQIGFTTSPTNARSTNYCTD 712 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 +P V+ D V A + + +II+++ YR RGH SM+ Sbjct: 713 LAKGLQVPIFHVNADDPEMVTRVAGLAYRFQQKFHKDVIIDLICYRRRGHNEGDDPSMTQ 772 Query: 292 PANY 295 P Y Sbjct: 773 PVMY 776 >gi|149276597|ref|ZP_01882740.1| transketolase [Pedobacter sp. BAL39] gi|149232266|gb|EDM37642.1| transketolase [Pedobacter sp. BAL39] Length = 809 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 77/355 (21%), Positives = 139/355 (39%), Gaps = 60/355 (16%) Query: 25 RAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 + T+ +D ++ F E F+ N + R L+ R E G+ G+ G Sbjct: 8 KPTTNPIDASELSF-EDFKTIVINDYKIAYESRQASLLGRKEVLTGKA-KFGIFGD---- 61 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASK-IMAELTGRQGGISKGKGGS 143 G+E + M + GD YR+ A G+ K A+L + G Sbjct: 62 --GKEVPQIAMAKAFKNGDWRAGYYRDQTFAFATGICTMKEFFAQLYANPSIEADPSSGG 119 Query: 144 MHM---FSTKNGFYGGH--------------GIVGAQVSLGTGIAFANKYRRSD------ 180 M F+T+ G G Q++ G+A+A+K + + Sbjct: 120 RQMNCHFATRTINDDGSWKDLTQIKNCSSDISTTGGQMARLVGLAYASKLYKQNPELNYL 179 Query: 181 --------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 ++ G+ + ++G +E+ N A + + + I ++ Y G SV A+ Sbjct: 180 KNFSVNGSEVAFGTIGNASTSEGVFFEAINAAGVLQIPMAISIWDDAY--GISVP---AK 234 Query: 233 TNFSKRGVSFNIPGMQVD----GMDIRAVKA--------TMDKAVAYCRAHKGPIIIEML 280 +K +S + G Q D G++I V+ T AV CR H P++I + Sbjct: 235 YQTTKEDISEVLKGFQRDEKGEGLEIYKVRGWDYPGLCETYQSAVDTCREHHIPVMIHVT 294 Query: 281 -TYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 + +GHS S Y+ + ++ +D I Q+RK +L + +E +L +E Sbjct: 295 EVTQPQGHSTSGSHERYKDKSRLD-WEKEYDCIVQMRKWMLESAIIAEEELSALE 348 >gi|320039481|gb|EFW21415.1| 2-oxoglutarate dehydrogenase E1 component [Coccidioides posadasii str. Silveira] Length = 1063 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 17/197 (8%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T A + S Sbjct: 442 VLLHGDAAFAAQGIVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRFARSTPYCSDIA 501 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + P V+ D+ AV A + K ++I+++ YR +GH+ +D + Sbjct: 502 KAIEAPVFHVNADDVEAVNFVCQLAADWRAQFKSDVVIDIVCYRKQGHNETDQPAFTQPL 561 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV----EFAQSDKE--- 352 + +++ +LL ++ D++E + V ++N+S E+ + +E Sbjct: 562 MYKRIADQTTQLDKYVNKLLQENTFTKEDIEEHKKWVWGMLNDSFDRSKEYQPTSREWLT 621 Query: 353 ------PDPAELYSDIL 363 P EL +++L Sbjct: 622 SAWNGFKSPKELATEVL 638 >gi|330469920|ref|YP_004407663.1| alpha-ketoglutarate decarboxylase [Verrucosispora maris AB-18-032] gi|328812891|gb|AEB47063.1| alpha-ketoglutarate decarboxylase [Verrucosispora maris AB-18-032] Length = 1256 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 14/127 (11%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV--SRASAQTNF 235 + + GD A A QG V E+ N++ L ++V+ NNQ T+ SR+S + Sbjct: 676 LPLAVHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHVVVNNQVGFTTAPEYSRSSLYSTD 735 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SM 289 R + P V+G D AV A Y + ++I+M+ YR RGH SM Sbjct: 736 VARMI--QAPIFHVNGDDPEAVVRVARLAFEYRQTFNKDVVIDMVCYRRRGHNEGDDPSM 793 Query: 290 SDPANYR 296 S+P Y+ Sbjct: 794 SNPQMYK 800 >gi|317404131|gb|EFV84579.1| transketolase domain-containing protein [Achromobacter xylosoxidans C54] Length = 285 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 1/107 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S G G+A + + D V GDG +GQV+E+ AA L+ ++ +I+ Sbjct: 125 GSIGHALSNGAGMALGGRMSQRDFNVFVMLGDGEMQEGQVWEAALFAAHHKLSRLVAIID 184 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 N Y + V + + +F +VDG D+ A+ A + + Sbjct: 185 RNGYQLDGKVDDVIGVESLRDKWQAFGWEVHEVDGHDLAALTALLRR 231 >gi|332653547|ref|ZP_08419292.1| transketolase, N- subunit [Ruminococcaceae bacterium D16] gi|332518693|gb|EGJ48296.1| transketolase, N- subunit [Ruminococcaceae bacterium D16] Length = 294 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 7/149 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G VS G+A A KY+ D GDG +GQV+E+F +A + L N+ +I+ Sbjct: 131 GSLGQGVSAAAGMALAAKYQGKDCRVYTLLGDGEIQEGQVWEAFMLAHHYKLDNLCVIID 190 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + +++ + ++ +F ++DG D M+ A A + KG P Sbjct: 191 NNGLQIDGNIADVMSPYPIPEKLKAFGFEVAEIDGHDFD----QMEAAFAKAKETKGVPF 246 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINE 303 I M T + +G S M + A + + +E Sbjct: 247 AIVMKTTKGKGVSYMENQAGWHGKAPNDE 275 >gi|300312273|ref|YP_003776365.1| 2-oxoglutarate dehydrogenase oxidoreductase [Herbaspirillum seropedicae SmR1] gi|300075058|gb|ADJ64457.1| 2-oxoglutarate dehydrogenase oxidoreductase (E1 component) protein [Herbaspirillum seropedicae SmR1] Length = 954 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 10/125 (8%) Query: 177 RRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 RR DK + ++ GD A A QG V E+ N+A ++++ NNQ TS Sbjct: 347 RRGDKDGSQVLPILVHGDAAFAGQGVVMETLNLAQTRGYGTGGTVHIVINNQIGFTTSDP 406 Query: 228 RASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S T + V P + V+G D AV AV Y K I+++++ +R G Sbjct: 407 RDSRSTLYCSDVVKMIEAPVLHVNGDDPEAVVFATQIAVDYRMKFKKDIVVDIICFRKLG 466 Query: 287 HSMSD 291 H+ D Sbjct: 467 HNEQD 471 >gi|121997877|ref|YP_001002664.1| 2-oxoglutarate dehydrogenase E1 component [Halorhodospira halophila SL1] gi|121589282|gb|ABM61862.1| 2-oxoglutarate dehydrogenase E1 component [Halorhodospira halophila SL1] Length = 945 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 9/168 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+F ++ + ++V+ NNQ TS + + +++ Sbjct: 361 LPLLIHGDAAFAGQGVVMETFQLSQARGFYTGGTVHVVVNNQIGFTTSHPQDTRSSHYCT 420 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PANY 295 P V+G D AV T A+ Y + ++I+++ YR GH+ +D PA Sbjct: 421 EVAKIVQAPIFHVNGDDPEAVAFTTALALDYRNTFRRDVVIDLICYRRHGHNEADEPAA- 479 Query: 296 RTREEINEMRSNHDPIEQ-VRKRLLHNKWASEGDLKEIEMNVRKIINN 342 T+ + + N P+ Q +RL+ + +E+ R+ + N Sbjct: 480 -TQPMMYQKIRNQPPVRQRYAERLVQEGILGPREAEEMVAAYREALEN 526 >gi|83286755|ref|XP_730299.1| 2-oxoglutarate dehydrogenase, E1 component [Plasmodium yoelii yoelii str. 17XNL] gi|23489985|gb|EAA21864.1| 2-oxoglutarate dehydrogenase, E1 component [Plasmodium yoelii yoelii] Length = 1038 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 20/241 (8%) Query: 131 GRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT------GIAFANKYRRSDK--- 181 G G + G + + ++ Y GIV L + G A A +Y +DK Sbjct: 344 GNTGDVKYHLGVEIDHYDEESNRYIHLGIVDNSSHLESVDPILMGQARAQQYYCNDKEKK 403 Query: 182 --ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF 235 + ++ GD + A QG YE+F ++ L + +V I+++ NNQ T A + Sbjct: 404 KVLPIIIHGDASIAGQGIAYETFQMSKLPSYSVGGTIHIVVNNQIGFTTYPVDARSGKYC 463 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + G +IP + V+ D AV A+ II+++ YR GH+ D + Sbjct: 464 TDIGKCIDIPIIHVNADDPEAVTYVFGLALDIRNKFNIDTIIDLVGYRKFGHNELDMPKF 523 Query: 296 RTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 T + ++ + H + + K+L+ + LKE E N +KI + + + K + Sbjct: 524 -TNPLLYDVIARHKSVLDIYSKKLIDENVIT---LKEFEENTKKIYDYYEQVYEQSKNFE 579 Query: 355 P 355 P Sbjct: 580 P 580 >gi|302023262|ref|ZP_07248473.1| transketolase subunit [Streptococcus suis 05HAS68] gi|330832032|ref|YP_004400857.1| transketolase domain-containing protein [Streptococcus suis ST3] gi|329306255|gb|AEB80671.1| Transketolase domain protein [Streptococcus suis ST3] Length = 282 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 5/118 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S+ TG+A+ K +S GDG N+GQ +E+ AA L+ +I ++ Sbjct: 117 GSLGQGMSVATGVAYGKKIEQSPYYTYTLVGDGELNEGQCWEAAQFAAHHELSKMILFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 +N+ + +F ++ +F ++V+G DI A+ A+ ++ K P Sbjct: 177 DNKKQLDGRTHDICQTFDFVEKFQAFGWESVRVNGADIDAII----NAILTMKSSKSP 230 >gi|241662794|ref|YP_002981154.1| 2-oxoglutarate dehydrogenase E1 component [Ralstonia pickettii 12D] gi|240864821|gb|ACS62482.1| 2-oxoglutarate dehydrogenase, E1 subunit [Ralstonia pickettii 12D] Length = 954 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 10/129 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A + RR DK + V GD A A QG V E+ N+A I+++ NNQ Sbjct: 343 ARQERRGDKHGAQVLAVQVHGDAAFAGQGVVMETLNLAQTRGYGTGGTIHIVINNQIGFT 402 Query: 224 TSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 TS R S T + V P + V+G D AV M AV + + I ++++ + Sbjct: 403 TSDPRDSRSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAMQLAVDFRTEFQKDIAVDIICF 462 Query: 283 RYRGHSMSD 291 R GH+ D Sbjct: 463 RKLGHNEQD 471 >gi|326923298|ref|XP_003207875.1| PREDICTED: 2-oxoglutarate dehydrogenase-like, mitochondrial-like [Meleagris gallopavo] Length = 1014 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + I+V+ NNQ Sbjct: 381 AEQFYRGDTAGKKVMSILLHGDAAFAGQGVVYETFHLSDLPSYTTNGTIHVVVNNQIGFT 440 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 441 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVMYVCSVAAEWRNTFNKDVVVDLVCYR 500 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 501 RRGHNEMDEP 510 >gi|312876789|ref|ZP_07736767.1| Transketolase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796408|gb|EFR12759.1| Transketolase domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 282 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A A K D V GDG +GQ++E+ AA + L N+ ++ Sbjct: 118 GSLGQGLSVANGMALAAKLDGKDYRVYVLLGDGEIQEGQIWEAAMTAAHYKLDNLTAFLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + ++ + ++ +F +++DG D + +KAV + KG P Sbjct: 178 HNGLQIDGKITEVMSPEPVDEKFKAFGWHVIKIDGHDFNQI----EKAVNEAKTIKGKPT 233 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRL 318 II T + +G S M + A + E +E+++K+L Sbjct: 234 IIIAETVKGKGVSFMENEAGWHGTAPNKEQAQK--ALEELQKQL 275 >gi|330836104|ref|YP_004410745.1| transketolase subunit A [Spirochaeta coccoides DSM 17374] gi|329748007|gb|AEC01363.1| transketolase subunit A [Spirochaeta coccoides DSM 17374] Length = 285 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 5/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSD-KICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G S GIA K ++ D + GDG + +GQV+E+ AA W L N+I Sbjct: 122 GSLGQGASAAVGIALGQKIQQLDGSYTYLIVGDGESQEGQVWEAAETAAQWKLGNLIAFT 181 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + + N R + FN +++G D + + + KA P Sbjct: 182 DFNRQQLDGYCEDIVSMNNIDTRWLGFNWHVQRINGHDFQQIAQAIAKAKEVTDR---PS 238 Query: 276 IIEMLTYRYRGHS 288 +I M T + +G++ Sbjct: 239 MIIMDTIKSQGYA 251 >gi|303247709|ref|ZP_07333979.1| Transketolase domain protein [Desulfovibrio fructosovorans JJ] gi|302490981|gb|EFL50878.1| Transketolase domain protein [Desulfovibrio fructosovorans JJ] Length = 281 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 72/155 (46%), Gaps = 7/155 (4%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSD-KICVVCFGDGAANQGQVYESFNIAALWNL- 209 G G +G + +G G+A A++ + ++CVV GDG N+G V+E+ +A Sbjct: 119 GTVAASGSLGHALPMGVGMALASRQLGTPYRVCVV-LGDGECNEGTVWEAVMLAVARQCG 177 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 N++ +++ N + + A +++ +F + VDG D+ ++ + + + Sbjct: 178 NLVAIVDGNGWQGTGRTAEILAAEPLAEKFRAFGWEALDVDGHDVWHLRELLRRGPTH-- 235 Query: 270 AHKGPIIIEMLTYRYRGHS-MSDPANYRTREEINE 303 P+++ T + +G S M D N+ R E Sbjct: 236 -PDRPLVLIARTVKGKGVSFMEDDNNWHYRIPTPE 269 >gi|68063403|ref|XP_673696.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56491734|emb|CAI02336.1| hypothetical protein PB300676.00.0 [Plasmodium berghei] Length = 556 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 20/241 (8%) Query: 131 GRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT------GIAFANKYRRSDK--- 181 G G + G + + ++ Y GIV L + G A A +Y +DK Sbjct: 248 GNTGDVKYHLGVEIDHYDEESNRYIHLGIVDNSSHLESVDPILMGQARAQQYYCNDKEKK 307 Query: 182 --ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF 235 + ++ GD + A QG YE+F ++ L + +V I+++ NNQ T A + Sbjct: 308 KVLPIIIHGDASIAGQGIAYETFQMSKLPSYSVGGTIHIVVNNQIGFTTYPVDARSGKYC 367 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + G +IP + V+ D AV A+ II+++ YR GH+ D + Sbjct: 368 TDIGKCIDIPIIHVNADDPEAVTYVFGLALDIRNKFNIDTIIDLVGYRKFGHNELDMPKF 427 Query: 296 RTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 T + ++ + H + + K+L+ + LKE E N +KI + + + K + Sbjct: 428 -TNPLLYDIIARHKSVLDIYSKKLIDENVIT---LKEFEENKKKIYDYYEQVYEQSKNFE 483 Query: 355 P 355 P Sbjct: 484 P 484 >gi|223932777|ref|ZP_03624775.1| Transketolase domain protein [Streptococcus suis 89/1591] gi|253751090|ref|YP_003024231.1| transketolase subunit [Streptococcus suis SC84] gi|253752991|ref|YP_003026131.1| transketolase subunit [Streptococcus suis P1/7] gi|253754814|ref|YP_003027954.1| transketolase subunit [Streptococcus suis BM407] gi|223898610|gb|EEF64973.1| Transketolase domain protein [Streptococcus suis 89/1591] gi|251815379|emb|CAZ50951.1| putative transketolase subunit [Streptococcus suis SC84] gi|251817278|emb|CAZ55007.1| putative transketolase subunit [Streptococcus suis BM407] gi|251819236|emb|CAR44479.1| putative transketolase subunit [Streptococcus suis P1/7] gi|319757351|gb|ADV69293.1| Transketolase domain protein [Streptococcus suis JS14] Length = 282 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 5/118 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S+ TG+A+ K +S GDG N+GQ +E+ AA L+ +I ++ Sbjct: 117 GSLGQGMSVATGVAYGKKIEQSPYYTYTLVGDGELNEGQCWEAAQFAAHHELSKMILFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 +N+ + +F ++ +F ++V+G DI A+ A+ ++ K P Sbjct: 177 DNKKQLDGRTHDICQTFDFVEKFQAFGWESVRVNGADIDAII----NAILTMKSSKSP 230 >gi|291529871|emb|CBK95456.1| transketolase subunit A [Eubacterium siraeum 70/3] Length = 273 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 6/135 (4%) Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 H + NG G +G +S+ G+A A K + D V GDG +G V+E Sbjct: 98 HPNNKVNGIEMNSGSLGHGLSVAIGMALAGKMDKRDYRVYVVMGDGELAEGSVWEGAMAG 157 Query: 205 ALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 + L N+ VI+ N+ + + Q + +R +F + +DG D+ A +D+ Sbjct: 158 GHYKLDNLCAVIDRNRLQISGTTEYVMNQESQEERWATFGWHVISIDGNDVDA----LDR 213 Query: 264 AVAYCRAHKG-PIII 277 A +A KG P +I Sbjct: 214 AFDEAKATKGKPTLI 228 >gi|297618034|ref|YP_003703193.1| transketolase [Syntrophothermus lipocalidus DSM 12680] gi|297145871|gb|ADI02628.1| Transketolase domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 277 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 6/140 (4%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G ++ G+A A + D GDG +G+V+E+ AA + L N Sbjct: 115 GVEASTGSLGQGIAWAVGMALAGRLDAKDYRVYTLLGDGEIQEGEVWEAVMAAAHYRLDN 174 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 ++ +++ N + +V + + + + +F ++DG D + + +++ A R Sbjct: 175 LVAIVDYNGLQIDGAVDKVMSPLPIAAKFEAFGWNTQEIDGHDFQQIMQSLEAA----RG 230 Query: 271 HKG-PIIIEMLTYRYRGHSM 289 HKG P I T + +G S Sbjct: 231 HKGRPSAIVARTVKGKGVSF 250 >gi|311740686|ref|ZP_07714513.1| 2-oxoglutarate dehydrogenase E1 component [Corynebacterium pseudogenitalium ATCC 33035] gi|311304206|gb|EFQ80282.1| 2-oxoglutarate dehydrogenase E1 component [Corynebacterium pseudogenitalium ATCC 33035] Length = 1246 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 10/137 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAAL---WNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD + G V E+ N++ L N ++++ NNQ T+ + + Sbjct: 655 VPVMLHGDASFTGLGIVQETINLSQLRGYTNGGTVHIVVNNQVGFTTTPDSGRSTHYATD 714 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 F+ P V+G D AV A Y R + I+++ YR RGH SM+ Sbjct: 715 LAKGFDCPVFHVNGDDPEAVVWVGQMAAEYRRQFGKDVFIDLMVYRLRGHNEADDPSMTQ 774 Query: 292 PANYRTREEINEMRSNH 308 P Y +E +R ++ Sbjct: 775 PELYSVIDEHKAVREHY 791 >gi|307721422|ref|YP_003892562.1| transketolase subunit A [Sulfurimonas autotrophica DSM 16294] gi|306979515|gb|ADN09550.1| transketolase subunit A [Sulfurimonas autotrophica DSM 16294] Length = 263 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 1/107 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +SLG G+A ANK +D V GDG N+G V+E+ A +L N+ +I+ Sbjct: 112 GSLGHGLSLGIGMAIANKIDNNDSNVYVVCGDGELNEGSVWEAIMFAPHKHLDNLTLIID 171 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 N+ + + +SFN +++DG + +++ + K Sbjct: 172 YNKLQGYGRTNEVINLEPLKDKLLSFNWDVIEIDGHNFSEIESALLK 218 >gi|298694708|gb|ADI97930.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus ED133] Length = 932 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +R HD +E V + K +EG + E EM+ Sbjct: 469 PVPYQNIRK-HDSVEYVFGK----KLVNEGVISEDEMH 501 >gi|302874154|ref|YP_003842787.1| Transketolase domain-containing protein [Clostridium cellulovorans 743B] gi|307689587|ref|ZP_07632033.1| Transketolase domain-containing protein [Clostridium cellulovorans 743B] gi|302577011|gb|ADL51023.1| Transketolase domain-containing protein [Clostridium cellulovorans 743B] Length = 274 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + GDG +GQV+E+ AA + L N+ ++ Sbjct: 117 GSLGQGISTAVGMALAGKLDNKEYRVYTVLGDGELEEGQVWEAAMCAAQYKLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N+ + ++ + + + V+FN + +DG D A+K +++A + KG P Sbjct: 177 YNKLQIDGNLWDVVSPEPIADKFVAFNWHVIAIDGHDFDAIKNALEEA----KNTKGKPT 232 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 233 VIVANTIKGKGVSF 246 >gi|255324461|ref|ZP_05365578.1| oxoglutarate dehydrogenase, E1 component [Corynebacterium tuberculostearicum SK141] gi|255298367|gb|EET77667.1| oxoglutarate dehydrogenase, E1 component [Corynebacterium tuberculostearicum SK141] Length = 1240 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 10/137 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAAL---WNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD + G V E+ N++ L N ++++ NNQ T+ + + Sbjct: 649 VPVMLHGDASFTGLGIVQETINLSQLRGYTNGGTVHIVVNNQVGFTTTPDSGRSTHYATD 708 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 F+ P V+G D AV A Y R + I+++ YR RGH SM+ Sbjct: 709 LAKGFDCPVFHVNGDDPEAVVWVGQMAAEYRRQFGKDVFIDLMVYRLRGHNEADDPSMTQ 768 Query: 292 PANYRTREEINEMRSNH 308 P Y +E +R ++ Sbjct: 769 PELYSVIDEHKAVREHY 785 >gi|86157208|ref|YP_463993.1| 2-oxoglutarate dehydrogenase E1 component [Anaeromyxobacter dehalogenans 2CP-C] gi|85773719|gb|ABC80556.1| 2-oxoglutarate dehydrogenase E1 component [Anaeromyxobacter dehalogenans 2CP-C] Length = 939 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 10/133 (7%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 + + R + V+ GD + A QG V E+ N++ L V I+VI NNQ TS A Sbjct: 332 HDFDRVRSLPVLVHGDASFAGQGIVAEALNMSQLEAYGVGGTIHVIVNNQVGFTTSPRDA 391 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH-- 287 + T + IP + V+G D+ AV + A + + ++I++ YR GH Sbjct: 392 RSTTYCTGPARMLQIPIIHVNGEDLEAVAQAVLLAADFRQRFHRDVVIDLWAYRRHGHNE 451 Query: 288 ----SMSDPANYR 296 S + P YR Sbjct: 452 GDEPSFTQPVMYR 464 >gi|218778918|ref|YP_002430236.1| transketolase [Desulfatibacillum alkenivorans AK-01] gi|218760302|gb|ACL02768.1| Transketolase, subunit A [Desulfatibacillum alkenivorans AK-01] Length = 280 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 6/131 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A + ++ D GDG N+G V+E+ A+ + L N++ ++ Sbjct: 120 GSLGHGLSIAVGLALGARLQKKDWYTYCVLGDGECNEGSVWEAAMSASHFKLNNLVTFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK-GPI 275 N+ + F+ + +F +VDG D + +D + +A K GP+ Sbjct: 180 RNRLMIDGKTEDVMGLEPFADKWKAFGFIVKEVDGHDFNQLAEAID----FAKAEKSGPV 235 Query: 276 IIEMLTYRYRG 286 +I T + +G Sbjct: 236 VIIANTAKGKG 246 >gi|148263331|ref|YP_001230037.1| 2-oxoglutarate dehydrogenase E1 component [Geobacter uraniireducens Rf4] gi|146396831|gb|ABQ25464.1| 2-oxoglutarate dehydrogenase E1 component [Geobacter uraniireducens Rf4] Length = 898 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 5/142 (3%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 R S + V+ GD A + QG V E+FN++ L ++++ NNQ T + A + Sbjct: 315 RGSRVLPVLIHGDAAFSGQGVVAETFNLSQLEGYRTGGTLHIVLNNQIGFTTLPADARST 374 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + P V G D AV A+ Y +A +++E++ YR GH+ D Sbjct: 375 QYATDVAKMVQSPIFHVHGDDPEAVVHAAGLALEYRQAFGKDVVVEIICYRRYGHNEGD- 433 Query: 293 ANYRTREEINEMRSNHDPIEQV 314 Y T+ + E N P+ ++ Sbjct: 434 EPYFTQPLMYEKIKNRPPLHEL 455 >gi|149179200|ref|ZP_01857767.1| 1-deoxy-D-xylulose-5-phosphate synthase [Planctomyces maris DSM 8797] gi|148841973|gb|EDL56369.1| 1-deoxy-D-xylulose-5-phosphate synthase [Planctomyces maris DSM 8797] Length = 637 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 20/174 (11%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNG----FYGGHGIVGAQVSLGTGIAFANKYR-RSDK 181 LTGR IS + KGG M + + F GH GA VS G+ + R SD+ Sbjct: 83 LTGRYSQISTIRRKGGLMGYPNPEESDYDLFMTGHA--GASVSTVLGLKAGDDLRGESDR 140 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV---------SRASAQ 232 V GDGA G V+E+ N AA + +V+ ++ +N+ + V +R + Sbjct: 141 KSVAVIGDGALPSGVVFEAMNNAAGMDQDVLVILNDNKMGICPRVGGLATYLDKARVAPF 200 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 N KR VS+ + + V G + + +AV G ++ E + +RY G Sbjct: 201 YNGLKRDVSWLLNKLPVVGESMEHTLGSFKEAVKGFL--HGGMLFEEMGFRYIG 252 >gi|283770484|ref|ZP_06343376.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus H19] gi|283460631|gb|EFC07721.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus H19] Length = 932 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +R HD +E V + K +EG + E EM+ Sbjct: 469 PVPYQNIRK-HDSVEYVFGK----KLVNEGVISEDEMH 501 >gi|21283032|ref|NP_646120.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus MW2] gi|81762510|sp|Q8NWR6|ODO1_STAAW RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|21204471|dbj|BAB95168.1| oxoglutarate dehydrogenase [Staphylococcus aureus subsp. aureus MW2] gi|32399926|emb|CAD92210.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399928|emb|CAD92211.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399930|emb|CAD92212.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399932|emb|CAD92213.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399934|emb|CAD92214.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399936|emb|CAD92215.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] gi|32399938|emb|CAD92216.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus] Length = 932 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +R HD +E V + K +EG + E EM+ Sbjct: 469 PVPYQNIRK-HDSVEYVFGK----KLVNEGVISEDEMH 501 >gi|70993636|ref|XP_751665.1| alpha-ketoglutarate dehydrogenase complex subunit Kgd1, putative [Aspergillus fumigatus Af293] gi|66849299|gb|EAL89627.1| alpha-ketoglutarate dehydrogenase complex subunit Kgd1, putative [Aspergillus fumigatus Af293] Length = 1057 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 5/174 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T + + S Sbjct: 436 VLLHGDAAFAGQGVVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRYSRSTPYCSDIA 495 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 S + P V+ D+ AV A + K ++I+++ YR +GH+ +D ++ Sbjct: 496 KSIDAPVFHVNADDVEAVNYVCQVAADWRAEFKRDVVIDIVCYRKQGHNETDQPSFTQPL 555 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +++ ++L+ ++ D+ E + V ++N+S + ++ D +P Sbjct: 556 MYKRIAEQKAQLDKYVEKLIAEGTFTKEDIDEHKKWVWGMLNDSFDRSK-DYQP 608 >gi|158521145|ref|YP_001529015.1| transketolase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509971|gb|ABW66938.1| Transketolase domain protein [Desulfococcus oleovorans Hxd3] Length = 280 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 7/146 (4%) Query: 144 MHMFSTK-NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 MH+ K G G +G + + G+A + ++ + GDG N+G V+E+ Sbjct: 105 MHLDGNKVRGVDASTGSLGHGLPIAVGMALGARLQKKSWMTYCILGDGECNEGSVWEAAM 164 Query: 203 IAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 AA + L N++ ++ N+ + + F+ + +F ++DG D A+ Sbjct: 165 AAAHFKLTNLVTFVDRNKLMIDGATEEIMNLEPFADKWKAFGFIVREIDGHDFNALA--- 221 Query: 262 DKAVAYCRAHK-GPIIIEMLTYRYRG 286 A+ Y A K GP++I T + +G Sbjct: 222 -DAIEYAHAEKSGPVLILANTAKGKG 246 >gi|129036|sp|P20707|ODO1_AZOVI RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|39232|emb|CAA36680.1| 2-oxoglutarate dehydrogenase [Azotobacter vinelandii] Length = 943 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR D + + GD A A QG V E+F ++ + I+++ NNQ Sbjct: 338 GSVRARQDRRVDATGEKVVPISIHGDSAFAGQGVVMETFQMSQIRGYKTGGTIHIVVNNQ 397 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS + T + + P + V+G D AV AV Y K ++I+ Sbjct: 398 VGFTTSNPVDTRSTEYCTDPAKMIQAPVLHVNGDDPEAVLFVTQLAVDYRMQFKRDVVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|226945045|ref|YP_002800118.1| 2-oxoglutarate dehydrogenase E1 component [Azotobacter vinelandii DJ] gi|226719972|gb|ACO79143.1| 2-oxoglutarate dehydrogenase, E1 component [Azotobacter vinelandii DJ] Length = 943 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR D + + GD A A QG V E+F ++ + I+++ NNQ Sbjct: 338 GSVRARQDRRVDATGEKVVPISIHGDSAFAGQGVVMETFQMSQIRGYKTGGTIHIVVNNQ 397 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS + T + + P + V+G D AV AV Y K ++I+ Sbjct: 398 VGFTTSNPVDTRSTEYCTDPAKMIQAPVLHVNGDDPEAVLFVTQLAVDYRMQFKRDVVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|323135995|ref|ZP_08071078.1| 2-oxoglutarate dehydrogenase, E1 subunit [Methylocystis sp. ATCC 49242] gi|322399086|gb|EFY01605.1| 2-oxoglutarate dehydrogenase, E1 subunit [Methylocystis sp. ATCC 49242] Length = 994 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 5/180 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E F ++ L ++ I NNQ T + + S Sbjct: 394 LPLLIHGDAAFAGQGVVAECFGLSGLKGHRTGGSLHFIINNQIGFTTYPRYSRSSPYPSD 453 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 P + V+G D AV A + + + P++I+M YR GH+ D + Sbjct: 454 VAKMVEAPILHVNGDDPEAVVFAARVATEFRQQFQKPVVIDMWCYRRFGHNEGDEPGFTQ 513 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 ++R++ ++ ++L+ + D+ +++ + R + E Q+ K P+ A+ Sbjct: 514 PLMYKKIRAHKTTLDLYGEKLIAEGQVTRADVDKMKEDWRSRLEQEFEAGQTYK-PNKAD 572 >gi|260940997|ref|XP_002615338.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238850628|gb|EEQ40092.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 999 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 7/179 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A + QG VYE+ +L + +++I NNQ T A + S Sbjct: 384 MPILLHGDAAFSAQGVVYETMGFESLPAYSTGGTVHIIINNQIGFTTDPRFARSTLYPSD 443 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + N P V+ DI AV + A + +II+++ YR GH+ +D + Sbjct: 444 IAKAINAPIFHVNADDIEAVTFVFNLAAEWRATFHSDVIIDVVGYRKHGHNETDQPAFTQ 503 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 ++ ++ +L+ + ++ D++E + V I+ S FA+S KE P Sbjct: 504 PVMYQKIAEKKSVLQYYADKLVQEETFTKEDIEEHKKWVWNILEES--FAKS-KEYQPT 559 >gi|71043640|ref|NP_001020891.1| probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial precursor [Rattus norvegicus] gi|123782074|sp|Q4KLP0|DHTK1_RAT RecName: Full=Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; AltName: Full=Dehydrogenase E1 and transketolase domain-containing protein 1; Flags: Precursor gi|68533804|gb|AAH99075.1| Dehydrogenase E1 and transketolase domain containing 1 [Rattus norvegicus] Length = 920 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + I++I NNQ T R + S Sbjct: 326 ICLQVHGDASFCGQGIVLETFTLSNLPHFRIGGSIHLIVNNQLGYTTPAERGRSSLYSSD 385 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G V A Y R + +II++L YR GH+ ++ Sbjct: 386 IGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIIDLLCYRQWGHNELDEPFFTN 445 Query: 292 PANY---RTREEINEMRSNH 308 P Y R R+ I + + H Sbjct: 446 PVMYKIIRARKSIPDTYAEH 465 >gi|268557406|ref|XP_002636692.1| Hypothetical protein CBG23406 [Caenorhabditis briggsae] gi|187021034|emb|CAP39616.1| hypothetical protein CBG_23406 [Caenorhabditis briggsae AF16] Length = 891 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 20/225 (8%) Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-------------ICV 184 KG G++H+ N H V++G A A R+ D + V Sbjct: 243 KGAEGNVHVTMLPNP---SHLEAVNPVAMGKARARAWSMRKGDYSPDERSARTGDGVLNV 299 Query: 185 VCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGV 240 + GDGA + QG V+ES ++ + + ++++ NNQ A S + T+ + Sbjct: 300 LVHGDGAFSGQGVVWESIALSQAPHFRLGGTVHLVTNNQIAFTAESSVGRSSTHCTDIAK 359 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREE 300 +F P + V+G V A+AY + + + ++ +R GH+ D + + Sbjct: 360 AFEYPVIHVNGDHPEEVVKATRLALAYRERFRKDVFVNLVCFRRWGHNELDDPTFTSPVM 419 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 E+ S R++ +E +KE N + +NN ++ Sbjct: 420 YKEVESRESVPRLFLDRMIDEGLTTEEAVKEELKNHTEQLNNELK 464 >gi|329733439|gb|EGG69771.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus 21193] Length = 932 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +R HD +E V + K +EG + E EM+ Sbjct: 469 PVPYQNIRK-HDSVEYVFGK----KLVNEGVISEDEMH 501 >gi|304407626|ref|ZP_07389278.1| Transketolase domain protein [Paenibacillus curdlanolyticus YK9] gi|304343577|gb|EFM09419.1| Transketolase domain protein [Paenibacillus curdlanolyticus YK9] Length = 269 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 89/233 (38%), Gaps = 41/233 (17%) Query: 50 EQELSAYRLM-----LLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 EQ +SAY++ L R +E + M CH +G +S+ D Sbjct: 2 EQSISAYKVQELPPPSLADRAKEARKLIIDMAATPTGCH---------IGGSLSVI--DL 50 Query: 105 MITAYREHGHILACGVDASKIM-------------------AELTGRQGGISKGKGGSMH 145 +I AY ++GH + SK AE G+QG + G H Sbjct: 51 LIAAYAKYGHDTHSSIILSKGHAAAGLYAALYVYGILPSNPAESYGKQGSLYTG-----H 105 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 G G +G V+ G A A K R ++ + + GDG +G ++E+ I Sbjct: 106 PNHKLPGIPFATGSLGHGVAYAAGWALAQKLRGTEGLGIAIGGDGELQEGLIWETAQIVQ 165 Query: 206 LWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 +L N IY+++ N V S N +R +F ++DG A+ Sbjct: 166 AQSLSNFIYIVDCNGGQNDGYVDDISPIRNLKERFEAFGFAVREIDGHQHDAI 218 >gi|255532275|ref|YP_003092647.1| transketolase [Pedobacter heparinus DSM 2366] gi|255345259|gb|ACU04585.1| Transketolase central region [Pedobacter heparinus DSM 2366] Length = 621 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 13/172 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K V GDG +GQV+E+ N AA L N++ + + Sbjct: 116 GSLGQGLSVAAGLALLAKRESLPCKNYVLLGDGELAEGQVWEAANFAAYHQLDNLVAIAD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--P 274 N+ A + +R +F M ++G D++ V+ ++A H+G P Sbjct: 176 INRLAQSGETMFGWDTDKYEQRFRAFGFETMVINGHDLKEVQIAFEQAF----YHQGGKP 231 Query: 275 IIIEMLTYRYRGHS-MSDPANYR----TREEINE-MRSNHDPIEQVRKRLLH 320 + I T + +G S + D + T EE+ ++ +P +Q++ L H Sbjct: 232 LAIVAHTIKGKGVSFLEDKEGWHGKALTEEELQSALKELGEPDDQLKLDLRH 283 >gi|159125413|gb|EDP50530.1| alpha-ketoglutarate dehydrogenase complex subunit Kgd1, putative [Aspergillus fumigatus A1163] Length = 1057 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 5/174 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T + + S Sbjct: 436 VLLHGDAAFAGQGVVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRYSRSTPYCSDIA 495 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 S + P V+ D+ AV A + K ++I+++ YR +GH+ +D ++ Sbjct: 496 KSIDAPVFHVNADDVEAVNYVCQVAADWRAEFKRDVVIDIVCYRKQGHNETDQPSFTQPL 555 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +++ ++L+ ++ D+ E + V ++N+S + ++ D +P Sbjct: 556 MYKRIAEQKAQLDKYVEKLIAEGTFTKEDIDEHKKWVWGMLNDSFDRSK-DYQP 608 >gi|49486254|ref|YP_043475.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus MSSA476] gi|57651914|ref|YP_186301.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp. aureus COL] gi|87159912|ref|YP_494003.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195143|ref|YP_499944.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221538|ref|YP_001332360.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus str. Newman] gi|161509578|ref|YP_001575237.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|258452755|ref|ZP_05700752.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A5948] gi|282927661|ref|ZP_06335276.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A9765] gi|284024413|ref|ZP_06378811.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus 132] gi|294850785|ref|ZP_06791501.1| oxoglutarate dehydrogenase [Staphylococcus aureus A9754] gi|297207930|ref|ZP_06924363.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912014|ref|ZP_07129457.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus TCH70] gi|304381009|ref|ZP_07363665.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|81649322|sp|Q6G9E8|ODO1_STAAS RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|81694511|sp|Q5HG06|ODO1_STAAC RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|122539579|sp|Q2FYM1|ODO1_STAA8 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|123485964|sp|Q2FH25|ODO1_STAA3 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|172048882|sp|A6QGW6|ODO1_STAAE RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|189029261|sp|A8Z3Z0|ODO1_STAAT RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|49244697|emb|CAG43131.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus MSSA476] gi|57286100|gb|AAW38194.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus subsp. aureus COL] gi|87125886|gb|ABD20400.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202701|gb|ABD30511.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374338|dbj|BAF67598.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus str. Newman] gi|160368387|gb|ABX29358.1| oxoglutarate dehydrogenase (succinyl-transferring) E1 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257859568|gb|EEV82419.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A5948] gi|269940908|emb|CBI49292.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus TW20] gi|282592050|gb|EFB97077.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus A9765] gi|283470628|emb|CAQ49839.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus ST398] gi|294822360|gb|EFG38813.1| oxoglutarate dehydrogenase [Staphylococcus aureus A9754] gi|296887504|gb|EFH26404.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886260|gb|EFK81462.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus TCH70] gi|304340453|gb|EFM06391.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315195876|gb|EFU26243.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp. aureus CGS01] gi|320139561|gb|EFW31431.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus MRSA131] gi|320142169|gb|EFW33987.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus MRSA177] gi|329730554|gb|EGG66940.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus aureus subsp. aureus 21189] Length = 932 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +R HD +E V + K +EG + E EM+ Sbjct: 469 PVPYQNIRK-HDSVEYVFGK----KLVNEGVISEDEMH 501 >gi|312889792|ref|ZP_07749338.1| 2-oxoglutarate dehydrogenase, E1 subunit [Mucilaginibacter paludis DSM 18603] gi|311297718|gb|EFQ74841.1| 2-oxoglutarate dehydrogenase, E1 subunit [Mucilaginibacter paludis DSM 18603] Length = 939 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 4/140 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD + A QG VYE ++ L I+++ NNQ T+ A + T + Sbjct: 335 ILIHGDASIAGQGIVYEVLQMSKLDGYRTGGTIHLVINNQIGFTTNYKDARSSTYCTDVA 394 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + P + V+G D A+ ++ A+ Y + + I++L YR GH+ +D + Sbjct: 395 KTVLSPVLHVNGDDAEALAFVINMAMEYRQTFHDDVFIDILCYRRYGHNEADEPKFTQPL 454 Query: 300 EINEMRSNHDPIEQVRKRLL 319 + S+ +P + ++LL Sbjct: 455 LYKAIESHANPRDIYNQKLL 474 >gi|221142646|ref|ZP_03567139.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|302751243|gb|ADL65420.1| oxoglutarate dehydrogenase (succinyl-transferring) E1 [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 932 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +R HD +E V + K +EG + E EM+ Sbjct: 469 PVPYQNIRK-HDSVEYVFGK----KLVNEGVISEDEMH 501 >gi|209551253|ref|YP_002283170.1| 2-oxoglutarate dehydrogenase E1 component [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537009|gb|ACI56944.1| 2-oxoglutarate dehydrogenase, E1 subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 994 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 81/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG + E ++ L V ++VI NNQ T+ + + + Sbjct: 391 RAKVLPLLIHGDAAFAGQGVIAEILGLSGLRGHRVAGTMHVIINNQIGFTTNPAFSRSSP 450 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P+++++ YR GH+ D Sbjct: 451 YPSDVAKMIEAPIFHVNGDDPEAVVYAAKVATEFRMKFHKPVVVDLFCYRRYGHNEGDEP 510 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ + +R + ++ RL+ +EG++++++ + R + E Q K P Sbjct: 511 SFTQPKMYKVIRGHKTVLQIYAARLVAEGLLTEGEVEKMKADWRAHLEQEFEAGQHYK-P 569 Query: 354 DPAE 357 + A+ Sbjct: 570 NKAD 573 >gi|329314091|gb|AEB88504.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus subsp. aureus T0131] Length = 932 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +R HD +E V + K +EG + E EM+ Sbjct: 469 PVPYQNIRK-HDSVEYVFGK----KLVNEGVISEDEMH 501 >gi|302333026|gb|ADL23219.1| oxoglutarate dehydrogenase (succinyl-transferring) E1 [Staphylococcus aureus subsp. aureus JKD6159] Length = 932 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N+ L + +++I NN+ T A + T + Sbjct: 349 MPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTD 408 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 409 VAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITN 468 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +R HD +E V + K +EG + E EM+ Sbjct: 469 PVPYQNIRK-HDSVEYVFGK----KLVNEGVISEDEMH 501 >gi|289550821|ref|YP_003471725.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus lugdunensis HKU09-01] gi|289180353|gb|ADC87598.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus lugdunensis HKU09-01] Length = 935 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 7/180 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N++ L + +++I NN+ T + T S Sbjct: 352 MPIIIHGDAAYPGQGINFETMNLSNLHGYSTGGTLHIITNNRIGFTTEPIDGRSTTYSSD 411 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P + V+ D+ A +D A+ + + ++I+++ YR GH+ D + Sbjct: 412 VAKGYDVPILHVNADDVEATIEAIDIALEFRKEFHKDVVIDLVGYRRYGHNEMDEPSITN 471 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKIINNSVE-FAQSDKEPDP 355 + +R HD +E + K+L+ SE + E V K + + + ++DK DP Sbjct: 472 PVPYHNIRQ-HDSVELLYGKQLIDEGVISEDYMNETIERVHKEMRAAQDKIDKTDKMDDP 530 >gi|225412233|ref|ZP_03761422.1| hypothetical protein CLOSTASPAR_05455 [Clostridium asparagiforme DSM 15981] gi|225042251|gb|EEG52497.1| hypothetical protein CLOSTASPAR_05455 [Clostridium asparagiforme DSM 15981] Length = 281 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S G G+A A + + D V GDG +GQV+E+ A L+ + +++ Sbjct: 118 GSLGQGLSAGIGMALAARADKKDYRTYVILGDGEIEEGQVWEAAMFAGNHGLDHLTAIVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N+ + SV ++ + + +F + +DG DI V +++A +A +G P+ Sbjct: 178 YNKLQVDGSVEEVNSPCPIADKFEAFKWEVLTIDGNDIEQVADALEQA----KAVRGKPV 233 Query: 276 IIEMLTYRYRGHSM 289 I T + +G S+ Sbjct: 234 AIIADTVKGKGVSI 247 >gi|32455996|ref|NP_861998.1| rb123 [Ruegeria sp. PR1b] gi|22726348|gb|AAN05144.1| RB123 [Ruegeria sp. PR1b] Length = 271 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 6/146 (4%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN- 210 G +G +G +S G G+A + R D+ V GDG N+G V+E+ +A L Sbjct: 108 GIESSNGSLGQGLSYGLGMALGMQKRGEDRRVYVLMGDGECNEGSVWEAAALAGELGLGP 167 Query: 211 VIYVIENNQYAM--GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 + +++ N + ++ A N ++ +F +VDG D A+KA D +A Sbjct: 168 LTAIVDQNGFRNDGANTLYAADKGPNLAQAWAAFGWDVHEVDGHDSTAIKAAFD--LART 225 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPAN 294 R + P ++ T + +G S + N Sbjct: 226 RTDQ-PSVLVAKTIKGKGISFMEANN 250 >gi|328863203|gb|EGG12303.1| hypothetical protein MELLADRAFT_115101 [Melampsora larici-populina 98AG31] Length = 1033 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 27/202 (13%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYE+ L N ++++ NNQ T + + S Sbjct: 415 ILLHGDAAFAGQGVVYETMGFHDLPNFGTGGTVHLVINNQIGFTTDPRQGRSTPYPSDIA 474 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 S + P V+G D AV A + K ++++++ YR GH+ +D ++ T+ Sbjct: 475 KSIDAPIFHVNGDDAEAVTFVCQLAADWRATFKKDVVVDIVCYRRHGHNETDQPSF-TQP 533 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN---------VRKIINNSVEFAQSD 350 ++ + +N ++ L EG E E+ + K S ++ + Sbjct: 534 KMYQAIANQPSTLKIYSENL----VKEGSFTEQEIEKHKEWVWGMMEKAYQGSKDYTPTS 589 Query: 351 KE---------PDPAELYSDIL 363 +E P P EL +IL Sbjct: 590 REWLSSSWDGFPSPKELKENIL 611 >gi|296138938|ref|YP_003646181.1| 2-oxoglutarate dehydrogenase, E1 subunit [Tsukamurella paurometabola DSM 20162] gi|296027072|gb|ADG77842.1| 2-oxoglutarate dehydrogenase, E1 subunit [Tsukamurella paurometabola DSM 20162] Length = 1239 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 12/185 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAAL---WNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L N ++++ NNQ TS + + + Sbjct: 653 MPLMLHGDAAFAGQGVVAETLNMANLDGFSNGGTVHIVVNNQVGFTTSPENSRSSQYCTD 712 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + ++I+++ YR RGH SM+ Sbjct: 713 VAKMIGAPIFHVNGDDPEACVWVAKLAVDFRERFHKDVVIDLVCYRRRGHNEGDDPSMTQ 772 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 P Y + +R ++ E + R + +E L++ + + ++ N E + Sbjct: 773 PGMYDVIDTKRGVRKSY--TEALIGRGDISTKEAEDALRDYQGQLERVFNEVKELEKFQA 830 Query: 352 EPDPA 356 EP P+ Sbjct: 831 EPAPS 835 >gi|332977533|gb|EGK14304.1| 1-deoxy-D-xylulose-5-phosphate synthase [Psychrobacter sp. 1501(2011)] Length = 701 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 37/243 (15%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 M L + R T +D +D P + LS +L+ L E LY Sbjct: 42 MRLFSEIPTSRPTTPLLDTIDSP----------ADLKPLSQDQLLTLADELREYL--LYS 89 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTG 131 G GG +G + + + L T D+++ ++ + H + LTG Sbjct: 90 AGQSGGHFGANLGVVELTLALHYLLDTPKDKLVWDVGHQAYAHKV------------LTG 137 Query: 132 RQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCF 187 R+ +S + K G + Y G+ +S G G++ A ++ +SD Sbjct: 138 RRDRLSSIRSKQGLTAFPERQESEYDTFGVGHSSTSISAGLGMSLALRHLKSDAKVACVI 197 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGA G +E+ N A N +++ V+ +N ++ S+ FS+ G Sbjct: 198 GDGAMTGGMAFEALNDAVQQNADLLVVLNDNDMSISCSIG------GFSRHLAMLWESGY 251 Query: 248 QVD 250 QVD Sbjct: 252 QVD 254 >gi|326388156|ref|ZP_08209759.1| alpha-ketoglutarate decarboxylase [Novosphingobium nitrogenifigens DSM 19370] gi|326207322|gb|EGD58136.1| alpha-ketoglutarate decarboxylase [Novosphingobium nitrogenifigens DSM 19370] Length = 936 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 8/120 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRASAQTNF 235 + V+ GD A A QG V+E F + + N I+ I NNQ TS SR S + Sbjct: 334 LPVLIHGDAAFAGQGIVWECFGFSGVHGYNTGGCIHFIINNQIGFTTSPKFSRGSPYPSD 393 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 +GV P + V+G D AV A+ Y + ++++M YR GH+ D ++ Sbjct: 394 VAKGV--QAPIIHVNGDDPEAVTFACKLAIDYRQKFGRDVVVDMWCYRRFGHNEGDEPSF 451 >gi|322514060|ref|ZP_08067131.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus ureae ATCC 25976] gi|322120077|gb|EFX92048.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus ureae ATCC 25976] Length = 936 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 8/199 (4%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALW 207 F H + + V +G+ A + R ++ + V GD A A QG V E+ N++ Sbjct: 320 AFNPSHLEIVSPVVIGSVRARQERIRDTEHNKVLAVTVHGDSAVAGQGVVQETLNMSNAR 379 Query: 208 NLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDK 263 V I ++ NNQ TS + T F + P + V+G D AV Sbjct: 380 GYKVGGTIRIVINNQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAARM 439 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AV Y K I I++++YR GH+ +D + ++ + P + RL+ Sbjct: 440 AVEYRALFKRDIFIDLISYRRHGHNEADEPLATQPTMYSIIKKHPTPRKVYADRLVAEGV 499 Query: 324 ASEGDLKEIEMNVRKIINN 342 ++ EI N R ++N Sbjct: 500 LNQDQATEIMNNYRDALDN 518 >gi|163756146|ref|ZP_02163262.1| transketolase [Kordia algicida OT-1] gi|161324020|gb|EDP95353.1| transketolase [Kordia algicida OT-1] Length = 803 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 60/296 (20%), Positives = 121/296 (40%), Gaps = 41/296 (13%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACG-VDASKIMAEL------------TGRQ 133 G+E + + + GD YR+ ++A G ++ + A L GRQ Sbjct: 54 GKEVPQLALAKAFQNGDFRSGYYRDQTFMMAIGELNIQQFFAGLYAHTDIEVEPMSAGRQ 113 Query: 134 GG-----ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK-YRRSDKICVVCF 187 G S K G + + Q+ G+A A+K YR D I F Sbjct: 114 MGGHFATHSLDKNGEWKNLTKQKNSSADISPTAGQMPRLLGLAQASKIYRHVDGIDTEKF 173 Query: 188 ------------GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 G+ + ++G +E+ N A + + ++ + +++Y + + + N Sbjct: 174 SDNGNEIAWGTIGNASTSEGLFFETINAAGVLQVPMVMSVWDDEYGISVHAKHQTTKENI 233 Query: 236 SKRGVSFNIPG-------MQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML-TYRYRGH 287 S+ F +V+G D ++ AT KA R + P++I + + +GH Sbjct: 234 SEILKGFQRTEDENGYEIFRVNGWDYPSLIATYQKASDIARENHVPVLIHVQQVTQPQGH 293 Query: 288 SMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 S S Y+++E + + +D Q+RK ++ N ++ +L +E +++K + + Sbjct: 294 STSGSHERYKSKERL-AWETEYDCNAQMRKWIIENDIETDENLTALEKDIKKQVRD 348 >gi|119500216|ref|XP_001266865.1| alpha-ketoglutarate dehydrogenase complex subunit Kgd1, putative [Neosartorya fischeri NRRL 181] gi|119415030|gb|EAW24968.1| alpha-ketoglutarate dehydrogenase complex subunit Kgd1, putative [Neosartorya fischeri NRRL 181] Length = 1057 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 5/174 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T + + S Sbjct: 436 VLLHGDAAFAGQGVVYETMGFHSLPAYSTGGTIHIIVNNQIGFTTDPRYSRSTPYCSDIA 495 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 S + P V+ D+ AV A + K ++I+++ YR +GH+ +D ++ Sbjct: 496 KSIDAPVFHVNADDVEAVNYVCQIAADWRAEFKRDVVIDIVCYRKQGHNETDQPSFTQPL 555 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +++ ++L+ ++ D+ E + V ++N+S + ++ D +P Sbjct: 556 MYKRIAEQKAQLDKYVEKLIAEGTFTKEDIDEHKKWVWGMLNDSFDRSK-DYQP 608 >gi|293354743|ref|XP_002728558.1| PREDICTED: probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial-like [Rattus norvegicus] Length = 832 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + I++I NNQ T R + S Sbjct: 326 ICLQVHGDASFCGQGIVLETFTLSNLPHFRIGGSIHLIVNNQLGYTTPAERGRSSLYSSD 385 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G V A Y R + +II++L YR GH+ ++ Sbjct: 386 IGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIIDLLCYRQWGHNELDEPFFTN 445 Query: 292 PANY---RTREEINEMRSNH 308 P Y R R+ I + + H Sbjct: 446 PVMYKIIRARKSIPDTYAEH 465 >gi|238650462|ref|YP_002916314.1| alpha-ketoglutarate decarboxylase [Rickettsia peacockii str. Rustic] gi|238624560|gb|ACR47266.1| alpha-ketoglutarate decarboxylase [Rickettsia peacockii str. Rustic] Length = 928 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQY-----AMGTSVS 227 +RS ++ GD A QG V ES +++ L ++ ++ + NNQ A T S Sbjct: 340 KRSKVKAILVHGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAANTRAS 399 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R S T F+K + P + V+G DI AV + AV Y + +++E++ YR GH Sbjct: 400 RYS--TEFAKIIAA---PILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKYGH 454 Query: 288 SMSDPANYRTREEINEMRSNHDP 310 + D Y + N +++ P Sbjct: 455 NEGDEPMYTQGKMYNIIKNKLTP 477 >gi|257125784|ref|YP_003163898.1| transketolase [Leptotrichia buccalis C-1013-b] gi|257049723|gb|ACV38907.1| Transketolase domain protein [Leptotrichia buccalis C-1013-b] Length = 282 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 5/103 (4%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKI-CVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ TGIA A + ++S+++ C+V GDG N+GQ +E+F A NLN + V Sbjct: 121 GSLGQGISIATGIAKALQIDKKSNRVFCIV--GDGEINEGQCWEAFQFIAHHNLNNLTVF 178 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 ++ N+ + ++ +F ++ SF + V G DI + Sbjct: 179 LDYNKKQLDGALDEIIKPFSFEEKMKSFGFDAVTVKGNDIEKM 221 >gi|193076701|gb|ABO11401.2| transketolase [Acinetobacter baumannii ATCC 17978] Length = 281 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 9/124 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G K ++SD DG N+G +E+ A+ W L N+I +I+ Sbjct: 122 GSLGHGLGIAVGACLGLKQKKSDAFVYNLLSDGELNEGSTWEAVMSASHWKLDNLIAIID 181 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-- 273 NNQ A G S S A R SF +VDG ++ A+ D+A R H+G Sbjct: 182 VNNQQADGHS-SEILAFEPIVDRWQSFGWYTQRVDGNNMEALLEAFDQA----RNHEGAC 236 Query: 274 PIII 277 P +I Sbjct: 237 PRVI 240 >gi|125975186|ref|YP_001039096.1| transketolase subunit A [Clostridium thermocellum ATCC 27405] gi|256003150|ref|ZP_05428142.1| Transketolase domain protein [Clostridium thermocellum DSM 2360] gi|281418392|ref|ZP_06249411.1| Transketolase domain protein [Clostridium thermocellum JW20] gi|125715411|gb|ABN53903.1| transketolase subunit A [Clostridium thermocellum ATCC 27405] gi|255992841|gb|EEU02931.1| Transketolase domain protein [Clostridium thermocellum DSM 2360] gi|281407476|gb|EFB37735.1| Transketolase domain protein [Clostridium thermocellum JW20] gi|316939352|gb|ADU73386.1| Transketolase domain-containing protein [Clostridium thermocellum DSM 1313] Length = 281 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + D V GDG +GQV+E+ A+ + L N+I ++ Sbjct: 118 GSLGQGISAAVGMAIAGKLDKKDYYVYVILGDGEMQEGQVWEALMSASHYKLNNLIAFLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 +N + +++ + + +F + +DG D R + + +A Sbjct: 178 HNHLQIDGNITEVMSPEPIVDKVRAFGWNVITIDGHDHRQISEAVREA 225 >gi|281345762|gb|EFB21346.1| hypothetical protein PANDA_014645 [Ailuropoda melanoleuca] Length = 868 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + I++I NNQ T R + S Sbjct: 275 ICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSIHLIVNNQLGYTTPAERGRSSLYCSD 334 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G V A Y R + +I+++L YR GH+ ++ Sbjct: 335 IGKLVGCAVIHVNGDSPEEVVRATQLAFEYQRHFRKDVIVDLLCYRQWGHNELDEPFFTN 394 Query: 292 PANY---RTREEINEMRSNH 308 P Y R R+ I + + H Sbjct: 395 PVMYKIIRARKSIPDTYAEH 414 >gi|126641019|ref|YP_001084003.1| transketolase [Acinetobacter baumannii ATCC 17978] Length = 255 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 14/167 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G K ++SD DG N+G +E+ A+ W L N+I +I+ Sbjct: 96 GSLGHGLGIAVGACLGLKQKKSDAFVYNLLSDGELNEGSTWEAVMSASHWKLDNLIAIID 155 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-- 273 NNQ A G S S A R SF +VDG ++ A+ D+A R H+G Sbjct: 156 VNNQQADGHS-SEILAFEPIVDRWQSFGWYTQRVDGNNMEALLEAFDQA----RNHEGAC 210 Query: 274 PIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 P +I T +G S +RE+ + +R + + L H Sbjct: 211 PRVIICDTKMGKGVSF-----LESREKTHFIRVDEHEWDDALNILTH 252 >gi|300915130|ref|ZP_07132445.1| Transketolase domain protein [Thermoanaerobacter sp. X561] gi|300888854|gb|EFK84001.1| Transketolase domain protein [Thermoanaerobacter sp. X561] Length = 261 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + V GDG +GQ++E+ AA + L N+ +++ Sbjct: 103 GSLGQGLSAANGMALAGKLDKKGYRVYVILGDGELQEGQIWEAAMTAAHYKLDNLTAILD 162 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + Q +++ +F +++DG D + DKA+ +A KG P Sbjct: 163 FNGLQIDGPNREVKKQEPVNEKFNAFGWHVIEIDGHDFDQI----DKAIEEAKATKGKPT 218 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 219 LIIAHTIKGKGVSF 232 >gi|242278036|ref|YP_002990165.1| transketolase [Desulfovibrio salexigens DSM 2638] gi|242120930|gb|ACS78626.1| Transketolase domain protein [Desulfovibrio salexigens DSM 2638] Length = 268 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 13/125 (10%) Query: 147 FSTKNGFYGGH------------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 F + +G GGH G +G +SL G+A A K +S GDG + Sbjct: 86 FCSFDGLVGGHPTTKTPGVEFATGSLGHGLSLAVGVAAALKIDKSKSRVFTVLGDGECGE 145 Query: 195 GQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 G V+E+ AA L N+ +++ N+ S F+ + +F +VDG D Sbjct: 146 GSVWEAATSAARQKLGNLTAIVDYNKLQSYGPTEDISGLEPFADKWKAFGFAVREVDGHD 205 Query: 254 IRAVK 258 + A++ Sbjct: 206 VEALE 210 >gi|213964423|ref|ZP_03392623.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Corynebacterium amycolatum SK46] gi|213952616|gb|EEB63998.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Corynebacterium amycolatum SK46] Length = 1222 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 10/137 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD + A G V E+ N+ +L V ++++ NNQ TS + + Sbjct: 639 MPLLLHGDASFAGLGIVQETLNLMSLRGYKVGGTVHIVVNNQIGFTTSPDSGRSSYYATD 698 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 ++ P V+G D AV AV Y + + I+++ YR RGH SM+ Sbjct: 699 IAKAYGCPVFHVNGDDPEAVVWVGQLAVEYRNRYGKDVFIDLVCYRKRGHNEADDPSMTQ 758 Query: 292 PANYRTREEINEMRSNH 308 P Y+ +E +R+ + Sbjct: 759 PLMYKIIDEKESVRAQY 775 >gi|34580820|ref|ZP_00142300.1| 2-oxoglutarate dehydrogenase e1 component [Rickettsia sibirica 246] gi|28262205|gb|EAA25709.1| 2-oxoglutarate dehydrogenase e1 component [Rickettsia sibirica 246] Length = 928 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L ++ ++ + NNQ + + +RAS Sbjct: 340 KRSKVKAILVHGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRAS 399 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV + AV Y + +++E++ YR GH+ Sbjct: 400 RYSTEFAKIIAA---PILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKYGHNE 456 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N +++ P Sbjct: 457 GDEPMYTQGKMYNIIKNKLTP 477 >gi|325121311|gb|ADY80834.1| transketolase [Acinetobacter calcoaceticus PHEA-2] Length = 281 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 9/124 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G K ++SD DG N+G +E+ A+ W L N+I +I+ Sbjct: 122 GSLGHGLGIAVGACLGLKQKKSDAFVYNLLSDGELNEGSTWEAVMSASHWKLDNLIAIID 181 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-- 273 NNQ A G S S A R SF +VDG ++ A+ D+A R H+G Sbjct: 182 VNNQQADGHS-SEILAFEPIVDRWQSFGWYTQRVDGNNMEALLEAFDQA----RNHEGAC 236 Query: 274 PIII 277 P +I Sbjct: 237 PRVI 240 >gi|301156155|emb|CBW15626.1| 2-oxoglutarate decarboxylase, thiamin-requiring [Haemophilus parainfluenzae T3T1] Length = 935 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 8/138 (5%) Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYV 214 ++GA S T N R+ + V GD A A QG V E+ N++ V I + Sbjct: 333 VIGAVRSRQTK---KNDTERNQVLAVTVHGDSAVAGQGVVQETLNMSNARGYTVGGTIRI 389 Query: 215 IENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 + NNQ TS + T + + P + V+G D AV AV Y K Sbjct: 390 VINNQIGFTTSNPNDTRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKR 449 Query: 274 PIIIEMLTYRYRGHSMSD 291 I I++++YR GH+ +D Sbjct: 450 DIFIDLISYRRHGHNEAD 467 >gi|255318875|ref|ZP_05360101.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter radioresistens SK82] gi|262378869|ref|ZP_06072026.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component protein [Acinetobacter radioresistens SH164] gi|255304131|gb|EET83322.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter radioresistens SK82] gi|262300154|gb|EEY88066.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component protein [Acinetobacter radioresistens SH164] Length = 946 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 18/165 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + ++ GD A A Sbjct: 309 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRKDIGGDDVLPLIVHGDAAFAG 362 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVS-FNIPGMQV 249 QG E+F ++ V +++I NNQ TS R + T +S P V Sbjct: 363 QGVNMETFQMSQTRGYTVGGTVHIIVNNQVGFTTSDPRDARSTEYSTDVAKMIQAPIFHV 422 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 +G D AV A + + ++I++ YR RGH+ +D PA Sbjct: 423 NGDDPEAVIFATQLAHDFRHTFRKDVVIDLFCYRRRGHNEADEPA 467 >gi|257069092|ref|YP_003155347.1| alpha-ketoglutarate decarboxylase [Brachybacterium faecium DSM 4810] gi|256559910|gb|ACU85757.1| 2-oxoglutarate dehydrogenase E1 component [Brachybacterium faecium DSM 4810] Length = 1317 Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 14/125 (11%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG V E+ N++ L ++VI NNQ +G + S++++F Sbjct: 737 VLVHGDAAFAGQGVVTETLNLSELRGYRTGGTVHVIINNQ--IGFTTLPDSSRSSFYSTD 794 Query: 240 V--SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 V S +P V+G D A + A + + ++I+M+ YR RGH SM+ Sbjct: 795 VAKSTQLPIFHVNGDDPEACVRVAEIAFEFRQKFHRDVVIDMVCYRRRGHNEGDDPSMTQ 854 Query: 292 PANYR 296 P Y+ Sbjct: 855 PEMYK 859 >gi|195111729|ref|XP_002000430.1| GI22533 [Drosophila mojavensis] gi|193917024|gb|EDW15891.1| GI22533 [Drosophila mojavensis] Length = 626 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 2/101 (1%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++G G+A+ K Y ++D V GDG + +G ++ES + A+ + L N+ Sbjct: 120 GTGSLGQGVAMGAGMAYVGKNYDKADYRTYVIVGDGESAEGSIWESLHFASHYELDNLCV 179 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + + N+ S + +R +F + VDG D+ Sbjct: 180 IFDVNRLGQSEPTSLQHRMDVYRERLEAFGFNALVVDGHDV 220 >gi|13235417|emb|CAC33676.1| sucA [Rickettsia rickettsii] Length = 770 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L ++ ++ + NNQ + + +RAS Sbjct: 340 KRSKVKAILVHGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRAS 399 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV + AV Y + +++E++ YR GH+ Sbjct: 400 RYSTEFAKIIAA---PILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKYGHNE 456 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N +++ P Sbjct: 457 GDEPMYTQGKMYNIIKNKLTP 477 >gi|110678915|ref|YP_681922.1| 2-oxoglutarate dehydrogenase E1 component [Roseobacter denitrificans OCh 114] gi|109455031|gb|ABG31236.1| alpha-ketoglutarate dehydrogenase [Roseobacter denitrificans OCh 114] Length = 986 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 5/188 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R+ + ++ GD A A QG V E F ++ L ++++ NNQ T+ + Sbjct: 379 NDPDRTSVMPILLHGDAAFAGQGVVAECFALSGLRGHRTGGTMHIVVNNQIGFTTAPHFS 438 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D AV A + + K ++I++ YR GH+ Sbjct: 439 RSSPYPTDNALVVEAPIFHVNGDDPEAVVHAAKVATEFRQKFKRDVVIDIFCYRRFGHNE 498 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + +++ + + +RL+ + EG++++++ + +N E A Sbjct: 499 GDEPMFTNPMMYKKIKGHKTTLSLYTERLVKDGLIPEGEIEDMKAAFQAYMNEEFE-AGK 557 Query: 350 DKEPDPAE 357 + P+ A+ Sbjct: 558 EYRPNKAD 565 >gi|15892150|ref|NP_359864.1| alpha-ketoglutarate decarboxylase [Rickettsia conorii str. Malish 7] gi|32129823|sp|Q92J42|ODO1_RICCN RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|15619280|gb|AAL02765.1| 2-oxoglutarate dehydrogenase e1 component [Rickettsia conorii str. Malish 7] Length = 928 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L ++ ++ + NNQ + + +RAS Sbjct: 340 KRSKVKAILVHGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRAS 399 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV + AV Y + +++E++ YR GH+ Sbjct: 400 RYSTEFAKIIAA---PILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKYGHNE 456 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N +++ P Sbjct: 457 GDEPMYTQGKMYNIIKNKLTP 477 >gi|268678863|ref|YP_003303294.1| deoxyxylulose-5-phosphate synthase [Sulfurospirillum deleyianum DSM 6946] gi|268616894|gb|ACZ11259.1| deoxyxylulose-5-phosphate synthase [Sulfurospirillum deleyianum DSM 6946] Length = 610 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 46/186 (24%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +++G A A K +S+++ V GDG+ + G VYE+ N Sbjct: 97 SPYDYFVAGHSSTSISLAVGAAKAIALKNEQSERLPVALIGDGSLSAGMVYEALNELGFR 156 Query: 208 NLNVIYVIENNQYAMGTSV-------SRASAQTNFSK----------------------- 237 V+ ++ +N+ ++ + S+A A + K Sbjct: 157 RYPVVIILNDNKMSIAKPIGAISKFLSQAMAGEFYQKIKKTTEQILQYLPESATYMAKKF 216 Query: 238 -RGVSFNIPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 G PG+ +DG D+ ++ M A R+ K P+II T + + Sbjct: 217 EEGFKLITPGILFEELGIDYIGPIDGHDVESLIRAMQSA----RSLKKPVIIHTQTLKGK 272 Query: 286 GHSMSD 291 G+ M++ Sbjct: 273 GYEMAE 278 >gi|224418245|ref|ZP_03656251.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter canadensis MIT 98-5491] gi|253827570|ref|ZP_04870455.1| deoxyxylulose-5-phosphate synthase [Helicobacter canadensis MIT 98-5491] gi|253510976|gb|EES89635.1| deoxyxylulose-5-phosphate synthase [Helicobacter canadensis MIT 98-5491] Length = 625 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 18/202 (8%) Query: 33 CVDIPFLEGFEVSEFNKEQELSAYRLMLLIR-RFEEKAGQLYGMGMVGGFCHLCIGQEAV 91 +D +LE + FN++ ++ L ++R R E + GG C+G + Sbjct: 2 SLDQKYLEILKKDNFNEQDYIALNELAQILRHRILEVVSK------NGGHLSSCLGSVEL 55 Query: 92 IVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 I+ M + D I +++ + H L G S E + GIS G + S Sbjct: 56 IIAMHCVFDSPNDPFIFDVSHQAYAHKLLTGRWDS---FETLRQTNGIS---GFTKPQES 109 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 + F GH +SLG GIA A S I VV GDGA + G YE+ N Sbjct: 110 NHDYFIAGHS--STSISLGVGIAKAFALNHSKNIPVVLIGDGAMSAGLAYEALNELGDRK 167 Query: 209 LNVIYVIENNQYAMGTSVSRAS 230 ++ ++ +N+ ++ + S Sbjct: 168 YPMVIILNDNEMSIAEPIGAIS 189 >gi|296333234|ref|ZP_06875687.1| transketolase, thiamine diphosphate binding domain (N-terminal subunit) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675261|ref|YP_003866933.1| transketolase, thiamine diphosphate binding domain (N-terminal subunit) [Bacillus subtilis subsp. spizizenii str. W23] gi|296149432|gb|EFG90328.1| transketolase, thiamine diphosphate binding domain (N-terminal subunit) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413505|gb|ADM38624.1| transketolase, thiamine diphosphate binding domain (N-terminal subunit) [Bacillus subtilis subsp. spizizenii str. W23] Length = 284 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 1/107 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A A K + GDG +GQ++E+ A ++L N+I ++ Sbjct: 124 GSLGQGLSCGVGMALAGKRDDKNYRVFAMVGDGECQEGQIWEAVQTAVKYSLDNLIVFVD 183 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 NN+ + + K+ F ++DG + + T+DK Sbjct: 184 NNRLQIDGFCDEVMPLQDIEKKFEVFGFETKRIDGHSMEEIVETLDK 230 >gi|240172273|ref|ZP_04750932.1| alpha-ketoglutarate decarboxylase [Mycobacterium kansasii ATCC 12478] Length = 1229 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 10/129 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 +R + ++ GD A A QG V E+ N+ L V I++I NNQ T+ + + Sbjct: 635 QRFSVVPMMLHGDAAFAGQGVVAETLNLTNLPGYRVGGTIHIIVNNQIGFTTAPEYSRSS 694 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH----- 287 + P V+G D A + AV + + ++I+ML YR RGH Sbjct: 695 EYCTDVAKMIGAPIFHVNGDDPEACEWVARLAVDFRQEFHKDVVIDMLCYRRRGHNEGDD 754 Query: 288 -SMSDPANY 295 SM++P Y Sbjct: 755 PSMTNPYMY 763 >gi|78223965|ref|YP_385712.1| 2-oxoglutarate dehydrogenase E1 component [Geobacter metallireducens GS-15] gi|78195220|gb|ABB32987.1| 2-oxoglutarate dehydrogenase E1 component [Geobacter metallireducens GS-15] Length = 896 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 7/142 (4%) Query: 179 SDK--ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 SDK + V+ GD + A QG V E+ N++ L ++++ NNQ T + A + Sbjct: 314 SDKRVLPVLIHGDASFAGQGVVAETLNLSQLEGYRTGGTLHIVINNQIGFTTLPADARSS 373 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + P V G D A + A+ Y +A G +++E++ YR GH+ D Sbjct: 374 LYATDVAKMVAAPVFHVHGEDPEAAVHVVRLALDYRQAFGGDVVVEIICYRRHGHNEGD- 432 Query: 293 ANYRTREEINEMRSNHDPIEQV 314 Y T+ + + + P+ ++ Sbjct: 433 EPYFTQPAMYSLIKDRPPVHEL 454 >gi|154245487|ref|YP_001416445.1| transketolase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154159572|gb|ABS66788.1| Transketolase domain protein [Xanthobacter autotrophicus Py2] Length = 282 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 7/130 (5%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + SD+ F DG ++G V+E+ AA Sbjct: 109 MASYTPGMEMSGGSLGLGLAIAVGRCLGLKRKGSDRHVYTLFSDGELDEGSVWEAIMSAA 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 + L N+I V++ NNQ A G S S + ++ +F +VDG D+ AV+ D Sbjct: 169 HFQLDNLIAVVDVNNQQADGPSTSVLGFEP-LKEKLEAFGWFVCRVDGNDLEAVRKAFDA 227 Query: 264 AVAYCRAHKG 273 C+A G Sbjct: 228 ----CKAQSG 233 >gi|325578252|ref|ZP_08148387.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus parainfluenzae ATCC 33392] gi|325159988|gb|EGC72117.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus parainfluenzae ATCC 33392] Length = 949 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 8/138 (5%) Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYV 214 ++GA S T N R+ + V GD A A QG V E+ N++ V I + Sbjct: 347 VIGAVRSRQTK---KNDTERNQVLAVTVHGDSAVAGQGVVQETLNMSNARGYTVGGTIRI 403 Query: 215 IENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 + NNQ TS + T + + P + V+G D AV AV Y K Sbjct: 404 VINNQIGFTTSNPNDTRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKR 463 Query: 274 PIIIEMLTYRYRGHSMSD 291 I I++++YR GH+ +D Sbjct: 464 DIFIDLISYRRHGHNEAD 481 >gi|312126928|ref|YP_003991802.1| transketolase domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311776947|gb|ADQ06433.1| Transketolase domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 282 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A A K D V GDG +GQ++E+ AA + L N+ ++ Sbjct: 118 GSLGQGLSVANGMALAAKLDGKDYRVYVLLGDGEIQEGQIWEAAMTAAHYKLDNLTAFLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + ++ + ++ +F +++DG D + +KAV + KG P Sbjct: 178 HNGLQIDGKITEVMSPEPVDEKFKAFGWHVIKIDGHDFNQI----EKAVNEAKTIKGKPT 233 Query: 276 IIEMLTYRYRGHSM 289 II T + +G S Sbjct: 234 IIIAETVKGKGVSF 247 >gi|239503001|ref|ZP_04662311.1| transketolase, N-terminal subunit [Acinetobacter baumannii AB900] Length = 283 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 9/124 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G K ++SD DG N+G +E+ A+ W L N+I +I+ Sbjct: 124 GSLGHGLGIAVGACLGLKQKKSDAFVYNLLSDGELNEGSTWEAVMSASHWKLDNLIAIID 183 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-- 273 NNQ A G S S A R SF +VDG ++ A+ D+A R H+G Sbjct: 184 VNNQQADGHS-SEILAFEPIVDRWQSFGWYTQRVDGNNMEALLEAFDQA----RNHEGAC 238 Query: 274 PIII 277 P +I Sbjct: 239 PRVI 242 >gi|329903480|ref|ZP_08273499.1| 2-oxoglutarate dehydrogenase E1 component [Oxalobacteraceae bacterium IMCC9480] gi|327548355|gb|EGF33040.1| 2-oxoglutarate dehydrogenase E1 component [Oxalobacteraceae bacterium IMCC9480] Length = 951 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 11/128 (8%) Query: 177 RRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 RR DK + ++ GD A A QG V E+ N+A ++++ NNQ TS Sbjct: 344 RRGDKDGSQVLPILVHGDAAFAGQGVVMETLNLAQTRGYGTGGTVHIVINNQIGFTTSDP 403 Query: 228 RASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S T + V P + V+G D AV A+ Y K I+++++ YR G Sbjct: 404 RDSRSTLYCSDVVKMIEAPVLHVNGDDPEAVVFATQIAMDYRIEFKKDIVVDIICYRKLG 463 Query: 287 HSMSD-PA 293 H+ D PA Sbjct: 464 HNEQDTPA 471 >gi|302384495|ref|YP_003820317.1| Transketolase domain protein [Clostridium saccharolyticum WM1] gi|302195123|gb|ADL02694.1| Transketolase domain protein [Clostridium saccharolyticum WM1] Length = 266 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 1/109 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G SL G+A A K+ + GDG +G V+E+ AA + L N+ ++++ Sbjct: 112 GSLGQGASLAMGLALAAKHGGASYHVYAVLGDGECQEGLVWEAAMAAAHYKLDNLTFLLD 171 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 N+ + + + + K+ +F +VDG DI A+ A + V Sbjct: 172 YNKLQIDGCNAEVMSLGDIVKKFEAFGFECFEVDGHDISAITAALKAPV 220 >gi|190149801|ref|YP_001968326.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189914932|gb|ACE61184.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 936 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 8/148 (5%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALW 207 F H + + V +G+ A + R ++ + V GD A A QG V E+ N++ Sbjct: 320 AFNPSHLEIVSPVVIGSVRARQERIRDTEHNKVLAVTVHGDSAVAGQGVVQETLNMSNAR 379 Query: 208 NLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDK 263 V I ++ NNQ TS + T F + P + V+G D AV Sbjct: 380 GYKVGGTIRIVINNQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAARM 439 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 AV Y K I I++++YR GH+ +D Sbjct: 440 AVEYRTLFKRDIFIDLISYRRHGHNEAD 467 >gi|251778591|ref|ZP_04821511.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082906|gb|EES48796.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 619 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 48/223 (21%), Positives = 84/223 (37%), Gaps = 65/223 (29%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF---------YGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ G ++ F+ +GF Y G +S G G+A A + Sbjct: 82 LTGRKDGFK-----NLRQFNGLSGFPKRNESKYDYFDTGHSSTSISAGLGMARARDLKGE 136 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V GDGA G E+ N ++ ++ +NQ ++ +V S N + G Sbjct: 137 KYTVVSVIGDGALTGGMALEALNDVGFRKTKMVIILNDNQMSISVNVGGLSRYLNKLRMG 196 Query: 240 VSFN----------------------------------IPGM-----------QVDGMDI 254 ++N +P M +DG DI Sbjct: 197 ETYNRLKTNINTSLGSSDLGKDLISKMSKVKDSIKQLVVPSMFFENMGVKYIGPIDGHDI 256 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD--PANY 295 +A M++ + + +GP+II +T + RG+S+++ P+ Y Sbjct: 257 KA----MNEVFSKVKDIEGPVIIHTVTQKGRGYSLAEKSPSKY 295 >gi|47224441|emb|CAG08691.1| unnamed protein product [Tetraodon nigroviridis] Length = 974 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 4/167 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GDG+ QG V E+ ++ L + V I++I NNQ T R + S Sbjct: 327 ICLQVHGDGSFTGQGIVAETLTLSKLPHYRVGGSIHLIVNNQVGYTTPSERGRSSFYCSD 386 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 G + + V+G V AV Y R + +I++++ YR GH+ D + Sbjct: 387 VGKMVDCAVIHVNGDHAEEVLRATRLAVEYQRLFRKDVILDLICYRQWGHNELDEPFFTN 446 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +RS + +L+ +E + +I+ ++N+ + Sbjct: 447 PSMYKIIRSRKSVPDSYADQLISEGLMTEAEHDDIKSKHYAMLNDKL 493 >gi|303250247|ref|ZP_07336447.1| alpha-ketoglutarate decarboxylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252125|ref|ZP_07338293.1| alpha-ketoglutarate decarboxylase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247461|ref|ZP_07529506.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307252012|ref|ZP_07533912.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256509|ref|ZP_07538290.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|302648908|gb|EFL79096.1| alpha-ketoglutarate decarboxylase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650863|gb|EFL81019.1| alpha-ketoglutarate decarboxylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306855964|gb|EFM88122.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306860481|gb|EFM92494.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306864919|gb|EFM96821.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 936 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 8/148 (5%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALW 207 F H + + V +G+ A + R ++ + V GD A A QG V E+ N++ Sbjct: 320 AFNPSHLEIVSPVVIGSVRARQERIRDTEHNKVLAVTVHGDSAVAGQGVVQETLNMSNAR 379 Query: 208 NLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDK 263 V I ++ NNQ TS + T F + P + V+G D AV Sbjct: 380 GYKVGGTIRIVINNQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAARM 439 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 AV Y K I I++++YR GH+ +D Sbjct: 440 AVEYRTLFKRDIFIDLISYRRHGHNEAD 467 >gi|260822647|ref|XP_002606713.1| hypothetical protein BRAFLDRAFT_82353 [Branchiostoma floridae] gi|229292057|gb|EEN62723.1| hypothetical protein BRAFLDRAFT_82353 [Branchiostoma floridae] Length = 622 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 7/134 (5%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G +S+ G+A+ KY V C GDG + +G V+E+ + +NL N++ Sbjct: 121 GTGSLGQGLSVACGMAYTGKYWDKASYRVYCMLGDGESAEGSVWEAMAWGSHYNLDNLVA 180 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 + + N+ + + KR +F VDG D+ A+ + +A + KG Sbjct: 181 IFDVNRLGQSEPTALQHEMDTYRKRAEAFGWNTYVVDGHDVEALCKVLHEASSV----KG 236 Query: 274 -PIIIEMLTYRYRG 286 P I TY+ +G Sbjct: 237 KPSCIIAKTYKGKG 250 >gi|221134281|ref|ZP_03560586.1| alpha-ketoglutarate decarboxylase [Glaciecola sp. HTCC2999] Length = 941 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 34/230 (14%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILA--CGVDASKIMAELTGRQ-----GGISKG 139 G + V+VGM A+R ++L G + S + E G+ G K Sbjct: 258 GTKEVVVGM------------AHRGRLNVLVNVLGKNPSVLFDEFAGKHDDSLGAGDVKY 305 Query: 140 KGGSMHMFSTKNG-------FYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGD 189 G F+T+ G F H + V +G+ A ++ D + + GD Sbjct: 306 HAGFSSDFATEGGNVHLALAFNPSHLEIVNPVVMGSVRARLSRRDSEDGAKVLPITIHGD 365 Query: 190 GA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNI 244 A A QG V E+FN++ V + ++ NNQ TS + + T + + Sbjct: 366 SAIAGQGVVQETFNMSQTRGFAVGGTVRIVVNNQVGFTTSKTEDTRSTQYCTDIAKMVQA 425 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+G D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 426 PIFHVNGDDPEAVMFVTKLALDYRNKFKRDVVIDLVCYRRHGHNEADEPN 475 >gi|222087458|ref|YP_002545995.1| 2-oxoglutarate dehydrogenase, E1 component [Agrobacterium radiobacter K84] gi|221724906|gb|ACM28062.1| 2-oxoglutarate dehydrogenase, E1 component [Agrobacterium radiobacter K84] Length = 994 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++VI NNQ T+ + + + Sbjct: 391 RAKVVPLLIHGDAAFAGQGVVAEILGLSGLRGHRVAGTMHVIINNQIGFTTNPAFSRSSP 450 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P+++++ YR GH+ D Sbjct: 451 YPSDVAKMIEAPIFHVNGDDPEAVVYAAKIATEFRMKFHKPVVLDLFCYRRYGHNEGDEP 510 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ +RL+ ++G++++++ + R + E Q K P Sbjct: 511 SFTQPNMYKVIRAHKTVLQLYSERLVAEGVLTDGEVEKMKADWRAHLEQEFEAGQHYK-P 569 Query: 354 DPAE 357 + A+ Sbjct: 570 NKAD 573 >gi|160938273|ref|ZP_02085628.1| hypothetical protein CLOBOL_03169 [Clostridium bolteae ATCC BAA-613] gi|158438646|gb|EDP16403.1| hypothetical protein CLOBOL_03169 [Clostridium bolteae ATCC BAA-613] Length = 624 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 2/96 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G GIA R D V GDGA G YE+ N AA Sbjct: 105 SPYDSFDTGHS--STSISAGLGIALGRDIRGEDYRVVSVIGDGALTGGMAYEALNNAARM 162 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 N I V+ +N+ ++ +V S N + G +N Sbjct: 163 KKNFIIVLNDNKMSISENVGGMSRYLNGLRTGSGYN 198 >gi|149690667|ref|XP_001500219.1| PREDICTED: similar to 2-oxoglutarate dehydrogenase E1 component-like, mitochondrial precursor (Alpha-ketoglutarate dehydrogenase-like) isoform 1 [Equus caballus] Length = 1010 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 377 AEQFYRGDAQGRKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVMYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|45656802|ref|YP_000888.1| transketolase subunit alpha protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45600038|gb|AAS69525.1| transketolase alpha subunit protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 288 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL- 209 NG G +G +S+ G+A ++++ + C DG +G +E+ A + L Sbjct: 123 NGIESSSGSLGQGLSVSVGLALGARFKKQNHKIYTCISDGECGEGMTWEAAQSAVHYKLD 182 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 N+I ++ N + ++ +SF ++ DG D+ + + +KA + Sbjct: 183 NLIAFMDKNGIQIDGFTKDVMNLEPLKEKFISFGWNVLEADGHDVEQIISAFEKA----K 238 Query: 270 AHKG-PIIIEMLTYRYRGHSM 289 HKG P II T +G S Sbjct: 239 LHKGSPTIILFKTVLGKGVSF 259 >gi|301779563|ref|XP_002925202.1| PREDICTED: probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial-like [Ailuropoda melanoleuca] Length = 1051 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + I++I NNQ T R + S Sbjct: 458 ICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSIHLIVNNQLGYTTPAERGRSSLYCSD 517 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G V A Y R + +I+++L YR GH+ ++ Sbjct: 518 IGKLVGCAVIHVNGDSPEEVVRATQLAFEYQRHFRKDVIVDLLCYRQWGHNELDEPFFTN 577 Query: 292 PANY---RTREEINEMRSNH 308 P Y R R+ I + + H Sbjct: 578 PVMYKIIRARKSIPDTYAEH 597 >gi|294828269|ref|NP_713399.2| hypothetical protein LA_3219 [Leptospira interrogans serovar Lai str. 56601] gi|293386119|gb|AAN50417.2| transketolase N-terminal subunit [Leptospira interrogans serovar Lai str. 56601] Length = 274 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL- 209 NG G +G +S+ G+A ++++ + C DG +G +E+ A + L Sbjct: 109 NGIESSSGSLGQGLSVSVGLALGARFKKQNHKIYTCISDGECGEGMTWEAAQSAVHYKLD 168 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 N+I ++ N + ++ +SF ++ DG D+ + + +KA + Sbjct: 169 NLIAFMDKNGIQIDGFTKDVMNLEPLKEKFISFGWNVLEADGHDVEQIISAFEKA----K 224 Query: 270 AHKG-PIIIEMLTYRYRGHSM 289 HKG P II T +G S Sbjct: 225 LHKGSPTIILFKTVLGKGVSF 245 >gi|167772587|ref|ZP_02444640.1| hypothetical protein ANACOL_03966 [Anaerotruncus colihominis DSM 17241] gi|167665065|gb|EDS09195.1| hypothetical protein ANACOL_03966 [Anaerotruncus colihominis DSM 17241] Length = 316 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 18/175 (10%) Query: 144 MHMFSTKNGFYGGH-------------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDG 190 + +F + +G GH G +G +S+ G+A + K + D GDG Sbjct: 127 LKLFRSIDGHVSGHAEMRYVKGVDMSTGSLGQGLSVAVGMALSGKIDKKDYHVYAIMGDG 186 Query: 191 AANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 +GQ++E+ AA + L N+ V++ N + + ++ +F ++ Sbjct: 187 EIEEGQIWEAAMAAAKFGLDNLCGVVDVNGLQIDGKTADVMPSEPLDQKWEAFGWNVIKC 246 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYRTREEINE 303 DG DI A+ D A A C+ P +I T + +G S M + A + + +E Sbjct: 247 DGHDIAAISDAFDAAAA-CKGK--PSVILAKTVKGKGVSFMENNAGWHGKAPNDE 298 >gi|157964246|ref|YP_001499070.1| 2-oxoglutarate dehydrogenase E1 component [Rickettsia massiliae MTU5] gi|157844022|gb|ABV84523.1| 2-oxoglutarate dehydrogenase E1 component [Rickettsia massiliae MTU5] Length = 928 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L ++ ++ + NNQ + + +RAS Sbjct: 340 KRSKVKAILVHGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRAS 399 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV + AV Y + +++E++ YR GH+ Sbjct: 400 RYSTEFAKIIAA---PILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKYGHNE 456 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N +++ P Sbjct: 457 CDEPMYTQGKMYNIIKNKLTP 477 >gi|121708090|ref|XP_001272026.1| alpha-ketoglutarate dehydrogenase complex subunit Kgd1, putative [Aspergillus clavatus NRRL 1] gi|119400174|gb|EAW10600.1| alpha-ketoglutarate dehydrogenase complex subunit Kgd1, putative [Aspergillus clavatus NRRL 1] Length = 1056 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/181 (22%), Positives = 82/181 (45%), Gaps = 5/181 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I++I NNQ T A + S Sbjct: 435 VLLHGDAAFAAQGVVYETMGFHSLPAYSTGGTIHLIVNNQIGFTTDPRFARSTPYCSDIA 494 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 S + P V+ D+ A+ A + K ++I+++ YR +GH+ +D ++ Sbjct: 495 KSIDAPVFHVNADDVEALNYVCQVAADWRAEFKRDVVIDIVCYRKQGHNETDQPSFTQPL 554 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 + +++ ++L+ ++ D+ E + V ++N+S + ++ D +P E Sbjct: 555 MYKRIAEQKAQLDKYVEKLISEGTFTKEDIDEHKKWVWGMLNDSFDRSK-DYQPTSKEWL 613 Query: 360 S 360 + Sbjct: 614 T 614 >gi|56963879|ref|YP_175610.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus clausii KSM-K16] gi|81366068|sp|Q5WG56|ODO1_BACSK RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|56910122|dbj|BAD64649.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus clausii KSM-K16] Length = 943 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 5/116 (4%) Query: 183 CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ GD A QG V E+ N++ L +V +++I NN T + + + T S Sbjct: 356 SILIHGDAAFPGQGVVTETLNLSRLNGYHVGGSLHIIANNNIGYTTEMHDSRSTTYASDP 415 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 F IP + V+ D A + AV Y R + +I+++ YR GH+ D PA Sbjct: 416 AKGFEIPIVHVNADDAEACVRAIKFAVEYRRKFQKDFLIDLIGYRRFGHNEGDEPA 471 >gi|300772631|ref|ZP_07082501.1| transketolase [Sphingobacterium spiritivorum ATCC 33861] gi|300760934|gb|EFK57760.1| transketolase [Sphingobacterium spiritivorum ATCC 33861] Length = 806 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 63/307 (20%), Positives = 123/307 (40%), Gaps = 45/307 (14%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA-----SKIMAELTGRQGGISKGKG 141 G+E + + EGD YR+ + A G+ S++ A S G+ Sbjct: 60 GKELAQIALAKVFREGDWRSGYYRDQTFVFASGISTVYHFFSQLYAHPDLEADPSSGGRQ 119 Query: 142 GSMHMFSTKNGFYGGH--------------GIVGAQVSLGTGIAFANKYRR--------- 178 + H FST+ G+ G Q+S G+ A+K R Sbjct: 120 MNCH-FSTRQIDEDGNWFNQMQQKNSASDISTTGGQMSRIMGLGLASKLYRHNPDLSHLS 178 Query: 179 --SDKICVVCF---GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 SDK V F G+ + ++G E+ N A + + V+ + ++ Y + + + Sbjct: 179 YFSDKGNEVVFCSVGNASTSEGVFLETINAAGVNQIPVVISVWDDGYGISVPNEVQTTKG 238 Query: 234 NFS--------KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY-RY 284 + S + G + +V+G D + T ++AV + R P ++ + + Sbjct: 239 DISEVLKGFQRQEGDTTGFEIFKVNGWDYAGLVETYEQAVRFAREEHVPCLVHVTELTQP 298 Query: 285 RGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +GHS S Y++ E + + + D ++R+ +L + A+E +L +IE ++ + Sbjct: 299 QGHSTSGSHERYKSAERL-QWEHDFDCNVKMRQWILESDMATEEELNQIEAEAKEYVRTE 357 Query: 344 VEFAQSD 350 A +D Sbjct: 358 QRRAWTD 364 >gi|149923175|ref|ZP_01911588.1| alpha-ketoglutarate decarboxylase [Plesiocystis pacifica SIR-1] gi|149815949|gb|EDM75465.1| alpha-ketoglutarate decarboxylase [Plesiocystis pacifica SIR-1] Length = 927 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A + QG V E+ N+AAL VI V+ NNQ T + A + + Sbjct: 332 LAVTMHGDAAFSGQGVVSETLNMAALEGYEAGGVIRVVINNQIGFTTDPTDARSGVYATD 391 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 +P V+G D A AVA+ +II+++ YR GH+ D + Sbjct: 392 VAHVLGVPVFHVNGDDPEAAAYVARLAVAWRERFHRDVIIDLVCYRQFGHNEGDDPTF 449 >gi|157828106|ref|YP_001494348.1| 2-oxoglutarate dehydrogenase E1 component [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932808|ref|YP_001649597.1| 2-oxoglutarate dehydrogenase E1 component [Rickettsia rickettsii str. Iowa] gi|157800587|gb|ABV75840.1| 2-oxoglutarate dehydrogenase e1 component [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907895|gb|ABY72191.1| 2-oxoglutarate dehydrogenase E1 component [Rickettsia rickettsii str. Iowa] Length = 928 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRAS 230 +RS ++ GD A QG V ES +++ L ++ ++ + NNQ + + +RAS Sbjct: 340 KRSKVKAILVHGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRAS 399 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV + AV Y + +++E++ YR GH+ Sbjct: 400 RYSTEFAKIIAA---PILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKYGHNE 456 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N +++ P Sbjct: 457 GDEPMYTQGKMYNIIKNKLTP 477 >gi|330811087|ref|YP_004355549.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379195|gb|AEA70545.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 943 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ ++++ NNQ Sbjct: 338 GSVRARQDRRNDPTGEKVLPISIHGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y +K ++I+ Sbjct: 398 VGFTISNPEDSRSTEYATDVAKMIQAPILHVNGDDPEAVLFVTQLAIDYRMQYKRDVVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|309774608|ref|ZP_07669633.1| transketolase, N- subunit [Erysipelotrichaceae bacterium 3_1_53] gi|308917639|gb|EFP63354.1| transketolase, N- subunit [Erysipelotrichaceae bacterium 3_1_53] Length = 275 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 9/136 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A ANKY + D GDG +GQV+E+ AA + L N++ ++ Sbjct: 116 GSLGQGISCAVGMAIANKYNKEDHRIYTILGDGECQEGQVWEAAMAAAHYKLDNLLAFVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSF--NIPGMQVDGMDIRAVKATMDKAVAYCRAHKG- 273 +N + +V+ T ++ +F N+ ++ +G D+ +V A ++A + KG Sbjct: 176 HNGLQIDGNVTDVMNPTPIDEKFKAFGWNVIVLE-NGNDLESVIAACEEA----KTVKGK 230 Query: 274 PIIIEMLTYRYRGHSM 289 P ++ T + +G S Sbjct: 231 PTVVVAHTVKGKGVSF 246 >gi|307263121|ref|ZP_07544742.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306871483|gb|EFN03206.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 936 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 8/148 (5%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALW 207 F H + + V +G+ A + R ++ + V GD A A QG V E+ N++ Sbjct: 320 AFNPSHLEIVSPVVIGSVRARQERIRDTEHNKVLAVTVHGDSAVAGQGVVQETLNMSNAR 379 Query: 208 NLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDK 263 V I ++ NNQ TS + T F + P + V+G D AV Sbjct: 380 GYKVGGTIRIVINNQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAARM 439 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 AV Y K I I++++YR GH+ +D Sbjct: 440 AVEYRTLFKRDIFIDLISYRRHGHNEAD 467 >gi|163788864|ref|ZP_02183309.1| transketolase [Flavobacteriales bacterium ALC-1] gi|159876101|gb|EDP70160.1| transketolase [Flavobacteriales bacterium ALC-1] Length = 803 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 40/190 (21%), Positives = 85/190 (44%), Gaps = 10/190 (5%) Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 GI N ++ ++I G+ + ++G +E+ N A + + ++ I +++Y + Sbjct: 167 GIDATNFSKQGNEIAWGTIGNASTSEGLFFETINAAGVLQVPMVISIWDDEYGISVHAKH 226 Query: 229 ASAQTNFSKRGVSFNIPGMQ-------VDGMDIRAVKATMDKAVAYCRAHKGPIIIEM-- 279 + + N S+ F Q V+G + + T +A R P++I + Sbjct: 227 QTTKENISEILKGFQRDKKQNGYEIFRVNGWNYPELIDTYQRAAQVSRKEHVPVMIHVQE 286 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LT + +GHS S ++ + +D Q+RK ++ N A+E +L E +++K Sbjct: 287 LT-QPQGHSTSGSHERYKNQDRLAWEAEYDCNAQMRKWMIENNIATEEELTAFEKDIKKA 345 Query: 340 INNSVEFAQS 349 + + + A S Sbjct: 346 VRDGKKAAWS 355 >gi|32034767|ref|ZP_00134892.1| COG0567: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207939|ref|YP_001053164.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae L20] gi|126096731|gb|ABN73559.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 936 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 8/148 (5%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALW 207 F H + + V +G+ A + R ++ + V GD A A QG V E+ N++ Sbjct: 320 AFNPSHLEIVSPVVIGSVRARQERIRDTEHNKVLAVTVHGDSAVAGQGVVQETLNMSNAR 379 Query: 208 NLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDK 263 V I ++ NNQ TS + T F + P + V+G D AV Sbjct: 380 GYKVGGTIRIVINNQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAARM 439 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 AV Y K I I++++YR GH+ +D Sbjct: 440 AVEYRTLFKRDIFIDLISYRRHGHNEAD 467 >gi|157803370|ref|YP_001491919.1| 2-oxoglutarate dehydrogenase E1 component [Rickettsia canadensis str. McKiel] gi|157784633|gb|ABV73134.1| alpha-ketoglutarate decarboxylase [Rickettsia canadensis str. McKiel] Length = 929 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ--YAMGTSVSRAS 230 +R+ ++ GD A QG V ES +++ L ++ ++ + NNQ + + +RAS Sbjct: 341 KRNKVKAILVHGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRAS 400 Query: 231 A-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 T F+K + P + V+G DI AV + AV Y + +++E++ YR GH+ Sbjct: 401 RYSTEFAKIIAA---PILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIVCYRKYGHNE 457 Query: 290 SDPANYRTREEINEMRSNHDP 310 D Y + N ++S P Sbjct: 458 GDEPMYTQGQMYNIIKSKLTP 478 >gi|307260937|ref|ZP_07542621.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869376|gb|EFN01169.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 936 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 8/148 (5%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALW 207 F H + + V +G+ A + R ++ + V GD A A QG V E+ N++ Sbjct: 320 AFNPSHLEIVSPVVIGSVRARQERIRDTEHNKVLAVTVHGDSAVAGQGVVQETLNMSNAR 379 Query: 208 NLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDK 263 V I ++ NNQ TS + T F + P + V+G D AV Sbjct: 380 GYKVGGTIRIVINNQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAARM 439 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 AV Y K I I++++YR GH+ +D Sbjct: 440 AVEYRTLFKRDIFIDLISYRRHGHNEAD 467 >gi|89068136|ref|ZP_01155553.1| 2-oxoglutarate dehydrogenase, E1 component [Oceanicola granulosus HTCC2516] gi|89046375|gb|EAR52432.1| 2-oxoglutarate dehydrogenase, E1 component [Oceanicola granulosus HTCC2516] Length = 989 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 83/184 (45%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L ++++ NNQ T+ + + Sbjct: 385 RKQVMGILLHGDAAFAGQGVVAEGFGLSGLRGHKTGGTMHIVVNNQIGFTTAPHFSRSSP 444 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+G D AV A + + ++I+M+ YR GH+ D Sbjct: 445 YPTDIALMVEAPIFHVNGDDPEAVVHAARVATEFRQKFGKDVVIDMICYRRFGHNEGDEP 504 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +++ + + +RL+ + EG++++++ + + ++N E ++ K P Sbjct: 505 MFTNPVMYKKIKGHKTTLTLYTERLVKDGLIPEGEIEDMKASFQSMLNEEFEAGKTYK-P 563 Query: 354 DPAE 357 + A+ Sbjct: 564 NKAD 567 >gi|314966516|gb|EFT10615.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL082PA2] Length = 1211 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 627 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 686 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 687 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 744 >gi|307245294|ref|ZP_07527382.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249687|ref|ZP_07531668.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307258705|ref|ZP_07540437.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853635|gb|EFM85852.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306858276|gb|EFM90351.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306867056|gb|EFM98912.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 936 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 8/148 (5%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALW 207 F H + + V +G+ A + R ++ + V GD A A QG V E+ N++ Sbjct: 320 AFNPSHLEIVSPVVIGSVRARQERIRDTEHNKVLAVTVHGDSAVAGQGVVQETLNMSNAR 379 Query: 208 NLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDK 263 V I ++ NNQ TS + T F + P + V+G D AV Sbjct: 380 GYKVGGTIRIVINNQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAARM 439 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 AV Y K I I++++YR GH+ +D Sbjct: 440 AVEYRTLFKRDIFIDLISYRRHGHNEAD 467 >gi|241206654|ref|YP_002977750.1| 2-oxoglutarate dehydrogenase E1 component [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860544|gb|ACS58211.1| 2-oxoglutarate dehydrogenase, E1 subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 994 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 83/184 (45%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG + E ++ L V ++VI NNQ T+ + + + Sbjct: 391 RAKVLPLLIHGDAAFAGQGVIAEILGLSGLRGHRVAGTMHVIINNQIGFTTNPAFSRSSP 450 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P + V+G D AV A + P+++++ YR GH+ D Sbjct: 451 YPSDVAKMIEAPILHVNGDDPEAVVYGAKIATEFRMKFHKPVVLDLFCYRRYGHNEGDEP 510 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ + +R++ ++ RL+ ++G++++++ + R + E Q K P Sbjct: 511 SFTQPKMYKVIRAHKTVLQLYAARLVAEGLLTDGEVEKMKADWRAHLEQEFEAGQHYK-P 569 Query: 354 DPAE 357 + A+ Sbjct: 570 NKAD 573 >gi|184200591|ref|YP_001854798.1| alpha-ketoglutarate decarboxylase [Kocuria rhizophila DC2201] gi|183580821|dbj|BAG29292.1| 2-oxoglutarate dehydrogenase E1 component [Kocuria rhizophila DC2201] Length = 1274 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A A QG VYE ++ L V I+V+ NNQ T+ S T + Sbjct: 683 LPIQVHGDAAMAGQGIVYEVMQMSGLEGYTVGGTIHVVVNNQVGFTTAPSAGRTSTYSTD 742 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 + P V+ D AV A Y + ++I+++ YR RGH SM+ Sbjct: 743 VARTVQAPIFHVNADDPEAVTRVAQLAFEYRQRFHHDVVIDLVCYRRRGHNEGDDPSMTQ 802 Query: 292 PANY 295 P Y Sbjct: 803 PLMY 806 >gi|308503567|ref|XP_003113967.1| hypothetical protein CRE_27066 [Caenorhabditis remanei] gi|308261352|gb|EFP05305.1| hypothetical protein CRE_27066 [Caenorhabditis remanei] Length = 840 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 5/174 (2%) Query: 177 RRSDKIC-VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASA 231 R D + V+ GDGA + QG V+ES ++ + + ++++ NNQ A S + Sbjct: 239 RTGDSVLNVLIHGDGAFSGQGVVWESIALSQAPHFRLGGTVHLVTNNQIAFTAESSVGRS 298 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 T+ + +F P + V+G V A+AY + + I ++ +R GH+ D Sbjct: 299 STHCTDIAKAFEYPVIHVNGDHPEEVVKATRLALAYRERFRKDVFINLVCFRRWGHNELD 358 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + + E+ + RL+ SE +KE + +NN ++ Sbjct: 359 DPTFTSPVMYKEVEARESVPRLFLDRLIEEGITSEEQVKEELQKHTEQLNNELK 412 >gi|304415489|ref|ZP_07396129.1| 1-deoxyxylulose-5-phosphate synthase [Candidatus Regiella insecticola LSR1] gi|304282659|gb|EFL91182.1| 1-deoxyxylulose-5-phosphate synthase [Candidatus Regiella insecticola LSR1] Length = 624 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I+K + G +H F + + GH +S G G+A A K +S+K Sbjct: 88 LTGRRENITKIRQKGGLHPFPCREESEYDALSVGHS--STSISAGLGMAVAAKQEKSEKH 145 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 146 TVCVIGDGAMTAGLAFEAMNHAGEIHADMLVILNDNEMSISENV 189 >gi|30995467|ref|NP_439804.2| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae Rd KW20] gi|1171886|sp|P45303|ODO1_HAEIN RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase Length = 935 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 345 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNTRGYSVGGTIRIVINNQIGFTTSNPND 404 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 405 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 464 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 465 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 524 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 525 EWREMDTAKM 534 >gi|327329884|gb|EGE71638.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL097PA1] Length = 1236 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 652 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 711 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 712 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 769 >gi|315092964|gb|EFT64940.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL060PA1] Length = 1211 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 627 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 686 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 687 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 744 >gi|314923472|gb|EFS87303.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL001PA1] Length = 1211 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 627 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 686 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 687 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 744 >gi|188588267|ref|YP_001921547.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum E3 str. Alaska E43] gi|229813268|sp|B2V4R3|DXS_CLOBA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|188498548|gb|ACD51684.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum E3 str. Alaska E43] Length = 619 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 48/223 (21%), Positives = 84/223 (37%), Gaps = 65/223 (29%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF---------YGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ G ++ F+ +GF Y G +S G G+A A + Sbjct: 82 LTGRKDGFK-----NLRQFNGLSGFPKRNESKYDYFDTGHSSTSISAGLGMARARDLKGE 136 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V GDGA G E+ N ++ ++ +NQ ++ +V S N + G Sbjct: 137 KYTVVSVIGDGALTGGMALEALNDVGFRKTKMVIILNDNQMSISVNVGGLSRYLNKLRMG 196 Query: 240 VSFN----------------------------------IPGM-----------QVDGMDI 254 ++N +P M +DG DI Sbjct: 197 ETYNRLKTNINTSLGSSDLGKDLISKMSKVKDSIKQLVVPSMFFENMGVKYIGPIDGHDI 256 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD--PANY 295 +A M++ + + +GP+II +T + RG+S+++ P+ Y Sbjct: 257 KA----MNEVFSKVKDIEGPVIIHTVTQKGRGYSLAEKSPSKY 295 >gi|85713706|ref|ZP_01044696.1| 2-oxoglutarate dehydrogenase, E1 component [Nitrobacter sp. Nb-311A] gi|85699610|gb|EAQ37477.1| 2-oxoglutarate dehydrogenase, E1 component [Nitrobacter sp. Nb-311A] Length = 985 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 4/173 (2%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 +R + ++ GD A A QG V E F ++ L I+ I NNQ T + + Sbjct: 382 QRDSVLPLLMHGDAAFAGQGVVAECFALSDLKGYRTGGSIHFIVNNQIGFTTYPRYSRSS 441 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 S + P V+G D AV AV + + P++I+M YR GH+ D Sbjct: 442 PYPSDVAKMIDAPIFHVNGDDPEAVVFAAKVAVEFRQKFHKPVVIDMFCYRRHGHNEGDE 501 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 ++ ++ ++ +E +RL +EG++++++ + R ++ E Sbjct: 502 PSFTNPTMYKKIATHPSTLELYARRLAAEGVITEGEIEKLKADWRARLDAEFE 554 >gi|328870369|gb|EGG18743.1| oxoglutarate dehydrogenase [Dictyostelium fasciculatum] Length = 1052 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%) Query: 164 VSLGTGIA---FANKYRRSDK-ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVI 215 V+LG A + N + D+ +C++ GD A QG V ES ++ L NV +++I Sbjct: 280 VALGKTRAKQMYDNDIEQKDRSMCLMMHGDAAVTGQGVVTESLQLSQLPGFNVGGCVHII 339 Query: 216 ENNQYAMGTSVSRASAQTNFSKR-GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 NNQ T++ + T +S G P + V+ + V+ A+ Y + K Sbjct: 340 VNNQLGF-TTIPKNGRSTRYSSDVGKFVGCPIIIVNSQNPEMVERAARLAIQYRQQFKKD 398 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMR 305 III+++ +R GH+ D ++ N +R Sbjct: 399 IIIDLIGWRKYGHNEIDEPSFTQPTMYNNIR 429 >gi|261378199|ref|ZP_05982772.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria cinerea ATCC 14685] gi|269145669|gb|EEZ72087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria cinerea ATCC 14685] Length = 637 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 4/102 (3%) Query: 129 LTGRQGGISKGK--GGSMHMFSTKNGFYGGHGIVGAQVSLGT--GIAFANKYRRSDKICV 184 LTGR+ + + GG Y G+ + S+G G+A A+K SD+ V Sbjct: 84 LTGRKNQMHTMRRYGGLAGFPKRSESEYDAFGVGHSSTSIGAALGMAAADKILGSDRRSV 143 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GDGA GQ +E+ N A ++N++ ++ +N+ ++ +V Sbjct: 144 AIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSISPNV 185 >gi|314981440|gb|EFT25534.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL110PA3] gi|315092105|gb|EFT64081.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL110PA4] Length = 1211 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 627 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 686 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 687 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 744 >gi|71733899|ref|YP_274204.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485474|ref|ZP_05639515.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. tabaci ATCC 11528] gi|71554452|gb|AAZ33663.1| 2-oxoglutarate dehydrogenase, E1 component [Pseudomonas syringae pv. phaseolicola 1448A] gi|320329262|gb|EFW85259.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. glycinea str. race 4] gi|330880838|gb|EGH14987.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. glycinea str. race 4] gi|330987441|gb|EGH85544.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010656|gb|EGH90712.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 943 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 24/210 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 338 GSVRARQDRRNDPNGDKVLPISLHGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K I+I+ Sbjct: 398 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVID 457 Query: 279 MLTYRYRGHSMSD------PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 ++ YR RGH+ +D P Y ++I + R+ E + L+ E ++ Sbjct: 458 LVCYRRRGHNEADEPSGTQPLMY---QQITKQRTTR---ELYAEHLIKTGILDEARVQAK 511 Query: 333 EMNVRKIINNSVEFAQS-DKEPDPAELYSD 361 + R ++N + +S KEP+ EL+ D Sbjct: 512 VDDYRSALDNGLHVVKSLVKEPN-KELFVD 540 >gi|330888154|gb|EGH20815.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. mori str. 301020] Length = 944 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 24/210 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 339 GSVRARQDRRNDPNGDKVLPISLHGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K I+I+ Sbjct: 399 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVID 458 Query: 279 MLTYRYRGHSMSD------PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 ++ YR RGH+ +D P Y ++I + R+ E + L+ E ++ Sbjct: 459 LVCYRRRGHNEADEPSGTQPLMY---QQITKQRTTR---ELYAEHLIKTGILDEARVQAK 512 Query: 333 EMNVRKIINNSVEFAQS-DKEPDPAELYSD 361 + R ++N + +S KEP+ EL+ D Sbjct: 513 VDDYRSALDNGLHVVKSLVKEPN-KELFVD 541 >gi|329571266|gb|EGG52960.1| putative pyruvate dehydrogenase E1 component subunit alpha [Enterococcus faecalis TX1467] Length = 192 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 10/161 (6%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + + E+ + M+ R ++++ L G +G F GQEA + + ++ + D Sbjct: 41 VPDLSDEELVELMTRMVWSRVLDQRSTALNRQGRLGFFAPTA-GQEASQLASQFAMEKED 99 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ YR+ ++ G+ + G G + ++ I+GAQ Sbjct: 100 YLLPGYRDVPQLVQHGLPLREAFLWSRGHVAG---------NYYAEDLNALPPQIIIGAQ 150 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 G+A K R + + GDG ++QG YE+ N A Sbjct: 151 YIQAAGVALGLKKRGKENVVFTYTGDGGSSQGDFYEAINFA 191 >gi|327327341|gb|EGE69117.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL103PA1] Length = 1211 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 627 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 686 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 687 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 744 >gi|315103515|gb|EFT75491.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL050PA2] Length = 1211 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 627 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 686 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 687 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 744 >gi|298486516|ref|ZP_07004576.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158993|gb|EFI00054.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 943 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 24/210 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 338 GSVRARQDRRNDPNGDKVLPISLHGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K I+I+ Sbjct: 398 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVID 457 Query: 279 MLTYRYRGHSMSD------PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 ++ YR RGH+ +D P Y ++I + R+ E + L+ E ++ Sbjct: 458 LVCYRRRGHNEADEPSGTQPLMY---QQITKQRTTR---ELYAEHLIKTGILDEARVQAK 511 Query: 333 EMNVRKIINNSVEFAQS-DKEPDPAELYSD 361 + R ++N + +S KEP+ EL+ D Sbjct: 512 VDDYRSALDNGLHVVKSLVKEPN-KELFVD 540 >gi|289624401|ref|ZP_06457355.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646685|ref|ZP_06478028.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. aesculi str. 2250] gi|330867445|gb|EGH02154.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 943 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 24/210 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 338 GSVRARQDRRNDPNGDKVLPISLHGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K I+I+ Sbjct: 398 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVID 457 Query: 279 MLTYRYRGHSMSD------PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 ++ YR RGH+ +D P Y ++I + R+ E + L+ E ++ Sbjct: 458 LVCYRRRGHNEADEPSGTQPLMY---QQITKQRTTR---ELYAEHLIKTGILDEARVQAK 511 Query: 333 EMNVRKIINNSVEFAQS-DKEPDPAELYSD 361 + R ++N + +S KEP+ EL+ D Sbjct: 512 VDDYRSALDNGLHVVKSLVKEPN-KELFVD 540 >gi|222151311|ref|YP_002560467.1| 2-oxoglutarate dehydrogenase, E1 component homolog [Macrococcus caseolyticus JCSC5402] gi|222120436|dbj|BAH17771.1| 2-oxoglutarate dehydrogenase, E1 component homolog [Macrococcus caseolyticus JCSC5402] Length = 925 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 5/117 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A QG +ES N++ L +V +++I NN+ T + + T + Sbjct: 344 LAVLIHGDAAFPGQGINFESMNLSNLKGYSVGGSLHIITNNRVGFTTESYDSRSTTYATD 403 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 +++P + V+ D+ A ++ A+AY + +I+++ YR GH+ M +P Sbjct: 404 VAKGYDLPIIHVNADDLEACIEAIEVAMAYRQKFNKDFVIDLVGYRRYGHNEMDEPT 460 >gi|254466410|ref|ZP_05079821.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Rhodobacterales bacterium Y4I] gi|206687318|gb|EDZ47800.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Rhodobacterales bacterium Y4I] Length = 911 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 80/184 (43%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E F ++ L ++++ NNQ T+ + + Sbjct: 383 RTQVLPILLHGDAAFAGQGVVAECFALSGLRGHKTGGTMHIVVNNQIGFTTAPHFSRSSP 442 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+G D AV A + + ++I++ YR GH+ D Sbjct: 443 YPTDNALVVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDIFCYRRFGHNEGDEP 502 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +++ + + RL+ + EG++++++ + +N E A D +P Sbjct: 503 MFTNPLMYKKIKGHKTTLTLYTDRLVKDGLIPEGEIEDMKAAFQAQLNEEFE-AGKDYKP 561 Query: 354 DPAE 357 + A+ Sbjct: 562 NKAD 565 >gi|165975914|ref|YP_001651507.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876015|gb|ABY69063.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 936 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 8/148 (5%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALW 207 F H + + V +G+ A + R ++ + V GD A A QG V E+ N++ Sbjct: 320 AFNPSHLEIVSPVVIGSVRARQERIRDTEHNKVLAVTVHGDSAVAGQGVVQETLNMSNAR 379 Query: 208 NLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDK 263 V I ++ NNQ TS + T F + P + V+G D AV Sbjct: 380 GYKVGGTIRIVINNQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAARM 439 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 AV Y K I I++++YR GH+ +D Sbjct: 440 AVEYRTLFKRDIFIDLISYRRHGHNEAD 467 >gi|320324896|gb|EFW80968.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. glycinea str. B076] Length = 943 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 24/210 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 338 GSVRARQDRRNDPNGDKVLPISLHGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K I+I+ Sbjct: 398 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVID 457 Query: 279 MLTYRYRGHSMSD------PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 ++ YR RGH+ +D P Y ++I + R+ E + L+ E ++ Sbjct: 458 LVCYRRRGHNEADEPSGTQPLMY---QQITKQRTTR---ELYAEHLIKTGILDEARVQAK 511 Query: 333 EMNVRKIINNSVEFAQS-DKEPDPAELYSD 361 + R ++N + +S KEP+ EL+ D Sbjct: 512 VDDYRSALDNGLHVVKSLVKEPN-KELFVD 540 >gi|295130820|ref|YP_003581483.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes SK137] gi|291377212|gb|ADE01067.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes SK137] gi|313772072|gb|EFS38038.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL074PA1] gi|313810271|gb|EFS47992.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL083PA1] gi|313830601|gb|EFS68315.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL007PA1] gi|313833638|gb|EFS71352.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL056PA1] gi|314973603|gb|EFT17699.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL053PA1] gi|314975825|gb|EFT19920.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL045PA1] gi|314983697|gb|EFT27789.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL005PA1] gi|315095876|gb|EFT67852.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL038PA1] gi|327326428|gb|EGE68218.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL096PA2] gi|327445677|gb|EGE92331.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL043PA2] gi|327448340|gb|EGE94994.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL043PA1] gi|328760882|gb|EGF74447.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL099PA1] Length = 1236 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 652 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 711 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 712 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 769 >gi|260581257|ref|ZP_05849075.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Haemophilus influenzae RdAW] gi|1574512|gb|AAC23308.1| 2-oxoglutarate dehydrogenase E1 component (sucA) [Haemophilus influenzae Rd KW20] gi|260092084|gb|EEW76029.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Haemophilus influenzae RdAW] Length = 950 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 360 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNTRGYSVGGTIRIVINNQIGFTTSNPND 419 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 420 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 479 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 480 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 539 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 540 EWREMDTAKM 549 >gi|315080395|gb|EFT52371.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL078PA1] Length = 1236 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 652 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 711 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 712 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 769 >gi|289428550|ref|ZP_06430234.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes J165] gi|289158244|gb|EFD06463.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes J165] gi|313807763|gb|EFS46250.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL087PA2] gi|313818799|gb|EFS56513.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL046PA2] gi|313820572|gb|EFS58286.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL036PA1] gi|313822623|gb|EFS60337.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL036PA2] gi|313825443|gb|EFS63157.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL063PA1] gi|314924936|gb|EFS88767.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL036PA3] gi|314960539|gb|EFT04641.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL002PA2] gi|314978710|gb|EFT22804.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL072PA2] gi|314987877|gb|EFT31968.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL005PA2] gi|314989688|gb|EFT33779.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL005PA3] gi|315084724|gb|EFT56700.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL027PA2] gi|315085409|gb|EFT57385.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL002PA3] gi|315088533|gb|EFT60509.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL072PA1] gi|327331697|gb|EGE73434.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL096PA3] gi|327443473|gb|EGE90127.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL013PA2] gi|328754685|gb|EGF68301.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL020PA1] gi|332675664|gb|AEE72480.1| 2-oxoglutarate decarboxylase [Propionibacterium acnes 266] Length = 1236 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 652 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 711 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 712 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 769 >gi|225387114|ref|ZP_03756878.1| hypothetical protein CLOSTASPAR_00864 [Clostridium asparagiforme DSM 15981] gi|225046800|gb|EEG57046.1| hypothetical protein CLOSTASPAR_00864 [Clostridium asparagiforme DSM 15981] Length = 281 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G++G S G+A K + GDG +GQ++E+ +AA + L N++Y+ + Sbjct: 117 GLLGQGFSTALGMALVKKREQDPHRVYAIAGDGETQEGQIWEALMMAAHYKLDNLVYIFD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N+ + G + + + +FN + +DG D+ V Sbjct: 177 YNKLSSGHPTNEVINLEPLADKLAAFNYHVIVIDGNDMEQV 217 >gi|126730343|ref|ZP_01746154.1| 2-oxoglutarate dehydrogenase, E1 component [Sagittula stellata E-37] gi|126709076|gb|EBA08131.1| 2-oxoglutarate dehydrogenase, E1 component [Sagittula stellata E-37] Length = 988 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/172 (20%), Positives = 74/172 (43%), Gaps = 4/172 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E F ++ L +++I NNQ T+ + + Sbjct: 386 RTQVMPILLHGDAAFAGQGVVAECFALSGLRGHRTGGTMHIIVNNQIGFTTAPHFSRSSP 445 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+G D AV A + + ++I++ YR GH+ D Sbjct: 446 YPTDNALVVEAPIFHVNGDDPEAVVHAAKVATEFRQKFGKDVVIDIFCYRRFGHNEGDEP 505 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + N+++ + +RL+ + EG++++++ + +N E Sbjct: 506 MFTNPVMYNKIKKQKTTLTLYTERLVKDGLIPEGEIEDMKAAFQAKLNEEFE 557 >gi|289425303|ref|ZP_06427080.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes SK187] gi|289154281|gb|EFD02969.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes SK187] Length = 1235 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 651 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 710 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 711 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 768 >gi|89898394|ref|YP_515504.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydophila felis Fe/C-56] gi|89331766|dbj|BAE81359.1| oxoglutarate dehydrogenase E1 component [Chlamydophila felis Fe/C-56] Length = 908 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/176 (21%), Positives = 77/176 (43%), Gaps = 6/176 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A + QG VYE+ ++ + + ++++ NN + + + Sbjct: 321 LALLIHGDAAFSGQGVVYETLQLSQIPGYSTGGTLHIVINNHIGFTAQPKESRSTPYCTD 380 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 IP +V+ D+ A ++ ++ +II+ YR GH+ SD + + Sbjct: 381 IAKMLGIPVFRVNAEDVTACLQAIEYSLKVREEFHCDVIIDFCCYRKYGHNESDDPSITS 440 Query: 298 REEINEMRSNHDPIEQVRKRLLHN--KWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 +E++ E RK LL N + SE L +IE N++ +N + + ++ Sbjct: 441 PLLYDEIKKKPTIREIYRKYLLENYSEEISEDSLVKIEQNIQDNLNKEFQLLKQEE 496 >gi|330899186|gb|EGH30605.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. japonica str. M301072PT] Length = 762 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 157 GSVRARQDRRNDPNGDKVLPISLHGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQ 216 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K I+I+ Sbjct: 217 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVID 276 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 277 LVCYRRRGHNEAD 289 >gi|313801619|gb|EFS42859.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL110PA2] gi|314962554|gb|EFT06654.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL082PA1] Length = 1236 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 652 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 711 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 712 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 769 >gi|313791898|gb|EFS39999.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL110PA1] gi|313816300|gb|EFS54014.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL059PA1] gi|313827407|gb|EFS65121.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL063PA2] gi|313838332|gb|EFS76046.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL086PA1] gi|314915685|gb|EFS79516.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL005PA4] gi|314917948|gb|EFS81779.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL050PA1] gi|314920329|gb|EFS84160.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL050PA3] gi|314931549|gb|EFS95380.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL067PA1] gi|314955479|gb|EFS99884.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL027PA1] gi|314957934|gb|EFT02037.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL002PA1] gi|315077768|gb|EFT49819.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL053PA2] gi|315098780|gb|EFT70756.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL059PA2] gi|315101449|gb|EFT73425.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL046PA1] gi|315108741|gb|EFT80717.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL030PA2] gi|327450535|gb|EGE97189.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL087PA3] gi|327453383|gb|EGF00038.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL092PA1] gi|327454126|gb|EGF00781.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL083PA2] gi|328753208|gb|EGF66824.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL025PA2] gi|328753951|gb|EGF67567.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL087PA1] Length = 1236 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 652 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 711 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 712 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 769 >gi|161598437|ref|YP_120910.2| alpha-ketoglutarate decarboxylase [Nocardia farcinica IFM 10152] Length = 1285 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 16/191 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N++ L I+++ NNQ T+ S T +S Sbjct: 698 VPLMLHGDAAFAGQGVVAETLNLSGLRGYRTGGTIHIVVNNQIGF-TTAPENSRSTEYST 756 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMS 290 F P V+G D A AV + + + ++I+++ YR RGH SM+ Sbjct: 757 DIAKFIGAPIFHVNGDDPEACDWVARLAVDFRQKFRKDVVIDLICYRRRGHNEGDDPSMT 816 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 P Y + +R ++ E + R + +E L++ + + ++ N E + Sbjct: 817 QPYMYDVIDTKRSVRKSY--TESLIGRGDISLKEAEDALRDYQGQLERVFNEVRELEKY- 873 Query: 351 KEPDPAELYSD 361 P P+E D Sbjct: 874 -PPGPSESVED 883 >gi|68074411|ref|XP_679121.1| 2-oxoglutarate dehydrogenase e1 component, mitochondrial precursor [Plasmodium berghei strain ANKA] gi|56499789|emb|CAH98795.1| 2-oxoglutarate dehydrogenase e1 component, mitochondrial precursor, putative [Plasmodium berghei] Length = 1038 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 20/241 (8%) Query: 131 GRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT------GIAFANKYRRSDK--- 181 G G + G + + ++ Y GIV L + G A A +Y +DK Sbjct: 344 GNTGDVKYHLGVEIDHYDEESNRYIHLGIVDNSSHLESVDPILMGQARAQQYYCNDKEKK 403 Query: 182 --ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF 235 + ++ GD + A QG YE+F ++ L + +V I+++ NNQ T A + Sbjct: 404 KVLPIIIHGDASIAGQGIAYETFQMSKLPSYSVGGTIHIVVNNQIGFTTYPVDARSGKYC 463 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + G +IP + V+ D AV A+ II+++ YR GH+ D + Sbjct: 464 TDIGKCIDIPIIHVNADDPEAVTYVFGLALDIRNKFNIDTIIDLVGYRKFGHNELDMPKF 523 Query: 296 RTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 T + ++ + H + + K+L+ + LKE E N +KI + + + K + Sbjct: 524 -TNPLLYDIIARHKSVLDIYSKKLIDENVIT---LKEFEENKKKIYDYYEQVYEQSKNFE 579 Query: 355 P 355 P Sbjct: 580 P 580 >gi|54018176|dbj|BAD59546.1| putative 2-oxoglutarate dehydrogenase [Nocardia farcinica IFM 10152] Length = 1268 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 16/191 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N++ L I+++ NNQ T+ S T +S Sbjct: 681 VPLMLHGDAAFAGQGVVAETLNLSGLRGYRTGGTIHIVVNNQIGF-TTAPENSRSTEYST 739 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMS 290 F P V+G D A AV + + + ++I+++ YR RGH SM+ Sbjct: 740 DIAKFIGAPIFHVNGDDPEACDWVARLAVDFRQKFRKDVVIDLICYRRRGHNEGDDPSMT 799 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 P Y + +R ++ E + R + +E L++ + + ++ N E + Sbjct: 800 QPYMYDVIDTKRSVRKSY--TESLIGRGDISLKEAEDALRDYQGQLERVFNEVRELEKY- 856 Query: 351 KEPDPAELYSD 361 P P+E D Sbjct: 857 -PPGPSESVED 866 >gi|325168344|ref|YP_004280134.1| transketolase, N-terminal subunit [Agrobacterium sp. H13-3] gi|325064067|gb|ADY67756.1| transketolase, N-terminal subunit [Agrobacterium sp. H13-3] Length = 298 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 1/110 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+ ++++ D V GDG +GQV+E+ A+ L N++ +++ Sbjct: 137 GSIGHALSNGVGMLLGARFQKRDFNAFVLLGDGEMQEGQVWEAALSASSHGLSNLVAIVD 196 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 N Y + V A ++ +F VDG D+ A+ + + A Sbjct: 197 RNGYQLDGKVDDVLAVEPLDEKWRAFGWEVHTVDGHDVHALTTLLRQVKA 246 >gi|313764207|gb|EFS35571.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL013PA1] Length = 1236 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 652 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 711 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 712 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 769 >gi|313898945|ref|ZP_07832472.1| Transketolase, thiamine diphosphate binding domain protein [Clostridium sp. HGF2] gi|312956144|gb|EFR37785.1| Transketolase, thiamine diphosphate binding domain protein [Clostridium sp. HGF2] Length = 284 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 1/110 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S GIA + + S + + GDG N+GQ +E+F A + L N I +I+ Sbjct: 118 GSLGQGTSAAAGIATGLRMKGSSRYVYMIVGDGELNEGQCWEAFQYVAHYKLNNCIVIID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 +N+ + + + +F V G DI A+ A +++A A Sbjct: 178 DNKRQLDGYTKDVMNPFSIPDKMKAFGFDVQVVKGNDIEAIDAAIEQAKA 227 >gi|145633339|ref|ZP_01789070.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae 3655] gi|145634467|ref|ZP_01790177.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae PittAA] gi|144986185|gb|EDJ92775.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae 3655] gi|145268447|gb|EDK08441.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae PittAA] Length = 935 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 345 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 404 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 405 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 464 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 465 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 524 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 525 EWREMDTAKM 534 >gi|75674620|ref|YP_317041.1| alpha-ketoglutarate decarboxylase [Nitrobacter winogradskyi Nb-255] gi|74419490|gb|ABA03689.1| 2-oxoglutarate dehydrogenase E1 component [Nitrobacter winogradskyi Nb-255] Length = 985 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 4/173 (2%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 +R+ + ++ GD A A QG V E F ++ L I+ I NNQ T + + Sbjct: 382 QRNSVLPLLMHGDAAFAGQGVVAECFALSDLKGYRTGGSIHFIVNNQIGFTTYPRYSRSS 441 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 S + P V+G D AV AV + + P++I+M YR GH+ D Sbjct: 442 PYPSDVAKMIDAPIFHVNGDDPEAVVFAAKVAVEFRQKFHKPVVIDMFCYRRHGHNEGDE 501 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 ++ ++ + +E KRL +EG++++++ + R ++ +E Sbjct: 502 PSFTNPLMYKKIAVHPSTLELYAKRLSAEGIITEGEIEKLKADWRARLDAELE 554 >gi|332519156|ref|ZP_08395623.1| 2-oxoglutarate dehydrogenase, E1 subunit [Lacinutrix algicola 5H-3-7-4] gi|332045004|gb|EGI81197.1| 2-oxoglutarate dehydrogenase, E1 subunit [Lacinutrix algicola 5H-3-7-4] Length = 918 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 6/174 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAAL--WNLN-VIYVIENNQYAMGTSVSRASAQTNFSK 237 + +V GD A A QG VYE +A L + N I+++ NNQ T+ A + T + Sbjct: 331 LPIVVHGDAAIAGQGLVYEVVQMAQLDGYKTNGTIHIVVNNQVGFTTNYLDARSSTYCTD 390 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 G P + V+ D AV A+ + K + I+ML YR GH+ D + T Sbjct: 391 VGKVTLSPVLHVNADDAEAVVHATLFALDFRMQFKRDVFIDMLGYRKYGHNEGDEPRF-T 449 Query: 298 REEINEMRSNH-DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 + ++ + S H +P ++L+ + +K++E N + + ++ ++ + Sbjct: 450 QPKLYKAISKHANPRNIYAEKLIAEGVIGKDHVKQLEKNYKDSLEEKLDASRKE 503 >gi|313812701|gb|EFS50415.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL025PA1] Length = 1236 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 652 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 711 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 712 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 769 >gi|119715972|ref|YP_922937.1| alpha-ketoglutarate decarboxylase [Nocardioides sp. JS614] gi|119536633|gb|ABL81250.1| 2-oxoglutarate dehydrogenase E1 component [Nocardioides sp. JS614] Length = 1263 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 8/120 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV--SRASAQTNF 235 + ++ GD A A QG V E+ N++ L I+V+ NNQ TS SR+S Sbjct: 687 LPLLVHGDAAFAGQGVVAETLNLSQLRGYRTGGTIHVVVNNQVGFTTSPGSSRSSLYATD 746 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 R V P V+G D A A Y +A ++I+++ YR RGH+ D +Y Sbjct: 747 VARMV--QAPIFHVNGDDPEACIRVSRLAFEYRQAFNKDVVIDLVCYRRRGHNEGDDPSY 804 >gi|121593454|ref|YP_985350.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. JS42] gi|166198592|sp|A1W4U9|DXS_ACISJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|120605534|gb|ABM41274.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. JS42] Length = 629 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 54/179 (30%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ---- 219 +S G+A A K R ++ CV GDGA G +E+ N A + + N++ ++ +N Sbjct: 125 ISAALGMALAAKQRGDERRCVAIIGDGAMTAGMAFEALNNAGVADANLLVILNDNDMSIS 184 Query: 220 ------------------YA----MGTSVSRASAQ-------------------TNFSKR 238 YA MG SV + + T F K Sbjct: 185 PPVGALNRYLAQLMSGQFYAKARDMGKSVLKNAPPLLELAKRLEQQAKGMVVPATLFEKF 244 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANY 295 G ++ P +DG D+ ++ T++ R KGP + ++T + +G+ + +DP Y Sbjct: 245 GFNYIGP---IDGHDLDSLIPTLEN----IRGLKGPQFLHVVTKKGQGYKLAEADPVAY 296 >gi|330973467|gb|EGH73533.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. aceris str. M302273PT] Length = 943 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 338 GSVRARQDRRNDPNGDKVLPISLHGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K I+I+ Sbjct: 398 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|328770673|gb|EGF80714.1| hypothetical protein BATDEDRAFT_19474 [Batrachochytrium dendrobatidis JAM81] Length = 964 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 5/117 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 +CV GD A A QG V E+ +A L + +++I NNQ T A + S Sbjct: 372 MCVQLHGDAAFAGQGVVTETLGLANLPHYTAGGSVHLIVNNQIGYTTPAMNARSTIYTSD 431 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 G N P + V+G V A Y III+M+ YR GH+ + +PA Sbjct: 432 VGKMINCPVIHVNGDFPEDVAYATSMAFEYRNKFHKDIIIDMIAYRRLGHNELDEPA 488 >gi|297300484|ref|XP_001085071.2| PREDICTED: probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial-like [Macaca mulatta] Length = 860 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F +++L + + +++I NNQ T R + S Sbjct: 326 ICLQVHGDASFCGQGIVPETFTLSSLPHFRIGGSVHLIVNNQLGYTTPAERGRSSLYCSD 385 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G V A Y R + +II++L YR GH+ ++ Sbjct: 386 IGKLVGCAIVHVNGDSPEEVVRATRLAFEYQRQFRKDVIIDLLCYRQWGHNELDEPFFTN 445 Query: 292 PANY---RTREEINEMRSNH 308 P Y R R+ I + + H Sbjct: 446 PIMYKIIRARKSIPDTYAEH 465 >gi|237803493|ref|ZP_04591078.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025475|gb|EGI05531.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. oryzae str. 1_6] Length = 943 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 24/210 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 338 GSVRARQDRRNDPNGDKVLPISLHGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K I+I+ Sbjct: 398 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVID 457 Query: 279 MLTYRYRGHSMSD------PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 ++ YR RGH+ +D P Y ++I + R+ E + L+ E ++ Sbjct: 458 LVCYRRRGHNEADEPSGTQPLMY---QQITKQRTTR---ELYAEHLIKTGVLDEARVQAK 511 Query: 333 EMNVRKIINNSVEFAQS-DKEPDPAELYSD 361 + R ++N + +S KEP+ EL+ D Sbjct: 512 VDDYRSALDNGLHVVKSLVKEPN-KELFVD 540 >gi|254480761|ref|ZP_05094008.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [marine gamma proteobacterium HTCC2148] gi|214039344|gb|EEB80004.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [marine gamma proteobacterium HTCC2148] Length = 945 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 81/343 (23%), Positives = 137/343 (39%), Gaps = 55/343 (16%) Query: 1 MYVAKQDVTVGDIKMALN----PSVSAKRAATSSVD---CVDIPFLEGFEVSEFNKEQEL 53 +++ K D T+G+I AL S+ A+ + D + +F +E +L Sbjct: 147 LHIGKADATLGEIHDALERTYCKSIGAEFMHIVNTDERHWIMTRMESVRSAPDFGREVQL 206 Query: 54 SAYRLMLLIRRFEEKAGQLYG----MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT-- 107 + R ++ E+ G Y G+ GG + + +E + + S G Q I Sbjct: 207 TLLRHLINAEGLEKSLGSKYPGTKRFGLEGGESLIPMLEEMI----QRSGNHGVQEIVIG 262 Query: 108 -AYREHGHIL--ACGVDASKIMAELTGR------------QGGISK--GKGGSMHMFSTK 150 A+R ++L G + S++ E G+ QG S GG +H+ Sbjct: 263 MAHRGRLNVLINVLGKNPSELFDEFEGKVEYETSGDVKYHQGFSSNVMTAGGELHL---A 319 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIA 204 F H + + V G+ A + RR D+ +V GD A A QG V E+F ++ Sbjct: 320 LAFNPSHLEIVSPVVEGS--VRARQERRKDENGELVTPIVIHGDAAFAGQGVVMETFQMS 377 Query: 205 ---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKAT 260 A I+++ NNQ T + T + + P V+ D AV Sbjct: 378 QTRAYKTGGTIHIVLNNQVGFTTHKREDARSTEYCTDVAKMVQAPIFHVNADDPEAVLFV 437 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSDPANYRT 297 AV Y + ++I+++ YR RGH S++ P Y+T Sbjct: 438 TQMAVDYRTEFRKDVVIDLICYRRRGHNEADEPSVTQPLMYQT 480 >gi|70729108|ref|YP_258844.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas fluorescens Pf-5] gi|68343407|gb|AAY91013.1| 2-oxoglutarate dehydrogenase, E1 component [Pseudomonas fluorescens Pf-5] Length = 943 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D+ + + GD A A QG V E+F ++ ++++ NNQ Sbjct: 338 GSVRARQDRRNDQTGDKVLPISIHGDAAFAGQGVVMETFQMSQTRGFRTGGTVHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y +K ++I+ Sbjct: 398 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVLFVTQLAIDYRMQYKRDVVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|325204822|gb|ADZ00276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis M01-240355] Length = 635 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 4/102 (3%) Query: 129 LTGRQGGISKGK--GGSMHMFSTKNGFYGGHGIVGAQVSLGT--GIAFANKYRRSDKICV 184 LTGR+ + + GG Y G+ + S+G G+A A+K SD+ V Sbjct: 84 LTGRKNQMHTMRRYGGLAGFPKRSESEYDAFGVGHSSTSIGAALGMAAADKILGSDRRSV 143 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GDGA GQ +E+ N A ++N++ ++ +N+ ++ +V Sbjct: 144 AIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSISPNV 185 >gi|297464791|ref|XP_002703453.1| PREDICTED: oxoglutarate dehydrogenase-like [Bos taurus] gi|297491631|ref|XP_002699018.1| PREDICTED: oxoglutarate dehydrogenase-like isoform 2 [Bos taurus] gi|296472031|gb|DAA14146.1| oxoglutarate dehydrogenase-like isoform 2 [Bos taurus] Length = 953 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 320 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 379 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 380 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 439 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 440 RRGHNEMDEP 449 >gi|66045249|ref|YP_235090.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. syringae B728a] gi|302187420|ref|ZP_07264093.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. syringae 642] gi|63255956|gb|AAY37052.1| Dehydrogenase, E1 component [Pseudomonas syringae pv. syringae B728a] gi|330951683|gb|EGH51943.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae Cit 7] Length = 943 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 338 GSVRARQDRRNDPNGDKVLPISLHGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K I+I+ Sbjct: 398 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|124487485|ref|NP_001074600.1| probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial precursor [Mus musculus] gi|160151263|sp|A2ATU0|DHTK1_MOUSE RecName: Full=Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; AltName: Full=Dehydrogenase E1 and transketolase domain-containing protein 1; Flags: Precursor gi|123233509|emb|CAM20352.1| dehydrogenase E1 and transketolase domain containing 1 [Mus musculus] Length = 921 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + I++I NNQ T R + S Sbjct: 327 ICLQVHGDASFCGQGIVLETFTLSNLPHFRIGGSIHLIVNNQLGYTTPAERGRSSLYSSD 386 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G V A Y R + +I+++L YR GH+ ++ Sbjct: 387 IGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIVDLLCYRQWGHNELDEPFFTN 446 Query: 292 PANY---RTREEINEMRSNH 308 P Y R R+ I + + H Sbjct: 447 PVMYKIIRARKSIPDTYAEH 466 >gi|305664118|ref|YP_003860406.1| transketolase subunit A [Ignisphaera aggregans DSM 17230] gi|304378687|gb|ADM28526.1| transketolase subunit A [Ignisphaera aggregans DSM 17230] Length = 277 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 9/151 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S GIA K R V GDG ++GQV+E+ AA L N+I +I+ Sbjct: 126 GSLGQGISFAVGIAAWIKSRGGRGRVYVLMGDGEQDEGQVWEAITHAATLKLDNLIVIID 185 Query: 217 NNQYAMGTSVSRASAQT--NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 N + + V + F + + + + + DG DI ++ +++A+ R P Sbjct: 186 ANGFQLDGKVDEVKPKPYLPFVWKAIGWRV--LWCDGHDIASIMTAIEEALESDR----P 239 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMR 305 +I T R G + + + E+I +++ Sbjct: 240 TVIFAKTIRGYGLKHIENTDKQRVEDIEDVK 270 >gi|145641089|ref|ZP_01796670.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae R3021] gi|145274250|gb|EDK14115.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae 22.4-21] Length = 939 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 345 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 404 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 405 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 464 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 465 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 524 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 525 EWREMDTAKM 534 >gi|28869401|ref|NP_792020.1| 2-oxoglutarate dehydrogenase, E1 component [Pseudomonas syringae pv. tomato str. DC3000] gi|213968184|ref|ZP_03396329.1| 2-oxoglutarate dehydrogenase, E1 component [Pseudomonas syringae pv. tomato T1] gi|301383811|ref|ZP_07232229.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. tomato Max13] gi|302059589|ref|ZP_07251130.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. tomato K40] gi|302133378|ref|ZP_07259368.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852642|gb|AAO55715.1| 2-oxoglutarate dehydrogenase, E1 component [Pseudomonas syringae pv. tomato str. DC3000] gi|213927164|gb|EEB60714.1| 2-oxoglutarate dehydrogenase, E1 component [Pseudomonas syringae pv. tomato T1] gi|331018597|gb|EGH98653.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 943 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 338 GSVRARQDRRNDPNGDKVLPISLHGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K I+I+ Sbjct: 398 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|301595940|ref|ZP_07240948.1| 2-oxoglutarate dehydrogenase E1 component [Acinetobacter baumannii AB059] Length = 878 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 309 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRRDIGGDDVLPVIVHGDAAFAG 362 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V +++I NNQ TS R + T + + P V Sbjct: 363 QGVNMETFQMSQTRGYTVGGTVHIIVNNQVGFTTSDPRDARSTEYCTDVAKMIQAPIFHV 422 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +G D AV A + + ++I++ YR RGH+ +D Sbjct: 423 NGDDPEAVIFATQLAHDFRHEFRKDVVIDLFCYRRRGHNEAD 464 >gi|284028867|ref|YP_003378798.1| transketolase central region [Kribbella flavida DSM 17836] gi|283808160|gb|ADB29999.1| Transketolase central region [Kribbella flavida DSM 17836] Length = 715 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 15/132 (11%) Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWN-----LNVIYVIENNQYAMGTSVSRASAQT 233 +D + V FGD +AN + N A + + ++ V E+N + + Sbjct: 181 ADAVVVTSFGDASANHSTATGAINAALHASYQGIPMPLLLVCEDNGIGISVRTPDGWIKQ 240 Query: 234 NFSKRGVSFNIPGMQ---VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + +R PG++ DG D+ A A +A + R ++ P + + T R GH+ S Sbjct: 241 AYGQR------PGLRYFDADGTDLAATLAMATEAATFVRRNRRPAFLRLRTVRLLGHAGS 294 Query: 291 D-PANYRTREEI 301 D YRT E+ Sbjct: 295 DVETAYRTPAEL 306 >gi|261364198|ref|ZP_05977081.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria mucosa ATCC 25996] gi|288567810|gb|EFC89370.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria mucosa ATCC 25996] Length = 637 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRRYGGLAGFPKRSESEYDAFGVGHSSTSIGAALGMAAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A ++N++ ++ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSISPNV 185 >gi|184157251|ref|YP_001845590.1| transketolase, N-terminal subunit [Acinetobacter baumannii ACICU] gi|332872893|ref|ZP_08440857.1| Transketolase, thiamine diphosphate binding domain protein [Acinetobacter baumannii 6014059] gi|183208845|gb|ACC56243.1| Transketolase, N-terminal subunit [Acinetobacter baumannii ACICU] gi|322507135|gb|ADX02589.1| Transketolase [Acinetobacter baumannii 1656-2] gi|323517115|gb|ADX91496.1| transketolase, N-terminal subunit [Acinetobacter baumannii TCDC-AB0715] gi|332738904|gb|EGJ69767.1| Transketolase, thiamine diphosphate binding domain protein [Acinetobacter baumannii 6014059] Length = 281 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 7/118 (5%) Query: 156 GHGIVGAQVSLGTGIA----FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G I G + G GIA K ++SD DG N+G +E+ A+ W L N Sbjct: 116 GMEITGGSLGHGLGIAVGACLGLKQKKSDAFVYNLLSDGELNEGSTWEAVMSASHWKLDN 175 Query: 211 VIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 +I +I+ NNQ A G S S A R SF +VDG ++ A+ D+A Y Sbjct: 176 LIAIIDVNNQQADGHS-SEILAFEPIVDRWQSFGWYTQRVDGNNMEALLEAFDQARNY 232 >gi|50842739|ref|YP_055966.1| alpha-ketoglutarate decarboxylase [Propionibacterium acnes KPA171202] gi|50840341|gb|AAT83008.1| 2-oxoglutarate dehydrogenase [Propionibacterium acnes KPA171202] gi|315105822|gb|EFT77798.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL030PA1] Length = 1236 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 652 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 711 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 712 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 769 >gi|330959056|gb|EGH59316.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. maculicola str. ES4326] Length = 943 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 338 GSVRARQDRRNDPNGDKVLPISLHGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K I+I+ Sbjct: 398 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|311271513|ref|XP_003133157.1| PREDICTED: LOW QUALITY PROTEIN: 2-oxoglutarate dehydrogenase-like, mitochondrial-like [Sus scrofa] Length = 1017 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 377 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|298370555|ref|ZP_06981870.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria sp. oral taxon 014 str. F0314] gi|298281165|gb|EFI22655.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria sp. oral taxon 014 str. F0314] Length = 639 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KDQMHTMRRYGGLAGFPKRSESEYDAFGVGHSSTSIGAALGMAAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A ++N++ ++ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSISPNV 185 >gi|261366098|ref|ZP_05978981.1| transketolase [Subdoligranulum variabile DSM 15176] gi|282572099|gb|EFB77634.1| transketolase [Subdoligranulum variabile DSM 15176] Length = 283 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 7/134 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICV-VCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G VS G+A A KY D + V GDG +G+V+E+F AA + L N+ +I Sbjct: 118 GSLGQGVSCAAGMAKAAKYLHKDDVRVYALLGDGEIEEGEVWEAFLFAAKYKLDNLCVII 177 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 + N + S + F + +DG D M+ A Y G P Sbjct: 178 DLNGLQIDGPTSEVMPTDPVDAKMRDFGFRTVSIDGHDF----VQMEDAFQYFHRQTGAP 233 Query: 275 IIIEMLTYRYRGHS 288 I M T + +G S Sbjct: 234 TAILMHTTKGKGVS 247 >gi|239993976|ref|ZP_04714500.1| alpha-ketoglutarate decarboxylase [Alteromonas macleodii ATCC 27126] Length = 939 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 57/231 (24%), Positives = 93/231 (40%), Gaps = 37/231 (16%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILA--CGVDASKIMAELTGRQ-----GGISKG 139 G + V++GM A+R ++L G + S + E +G+ G K Sbjct: 257 GTKEVVIGM------------AHRGRLNVLVNVLGKNPSVLFDEFSGKHDDSLGAGDVKY 304 Query: 140 KGGSMHMFSTKNG-------FYGGHGIVGAQVSLGTGIAFANKYRRSDK----ICVVCFG 188 G F+T G F H + V +G+ A RR+D + + G Sbjct: 305 HAGFSSDFATPGGNVHLALAFNPSHLEIVNPVVMGS--VRARLARRNDDTNTVLPITIHG 362 Query: 189 DGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFN 243 D A A QG V E+FN++ V + ++ NNQ TS + + T + + Sbjct: 363 DSAIAGQGVVQETFNMSQTRGFAVGGTVRIVVNNQVGFTTSKTEDTRSTQYCTDIAKMVQ 422 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+ D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 423 APIFHVNSDDPEAVAFVTQLALEYRNKFKKDVVIDLVCYRRHGHNEADEPN 473 >gi|330940366|gb|EGH43471.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. pisi str. 1704B] Length = 943 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 338 GSVRARQDRRNDPNGDKVLPISLHGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K I+I+ Sbjct: 398 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|317492638|ref|ZP_07951065.1| transketolase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919388|gb|EFV40720.1| transketolase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 276 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 5/103 (4%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G VS+ TG+A A++ R++ C++ GDG N+GQ +E+F A NL N+ Sbjct: 116 GSLGQGVSIATGMALAHRLAGRKNRVFCIL--GDGELNEGQCWEAFQFIAHHNLNNLTLF 173 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 I+ N+ + ++ + + +F + V G DI A+ Sbjct: 174 IDYNKQQLDGTLDEVIKPFDLKAKFSAFGFDVVSVKGDDIAAI 216 >gi|260582632|ref|ZP_05850421.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Haemophilus influenzae NT127] gi|260094304|gb|EEW78203.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Haemophilus influenzae NT127] Length = 950 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 360 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 419 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 420 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 479 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 480 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRNALDNGDRVVS 539 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 540 EWREMDTAKM 549 >gi|256425083|ref|YP_003125736.1| 2-oxoglutarate dehydrogenase, E1 subunit [Chitinophaga pinensis DSM 2588] gi|256039991|gb|ACU63535.1| 2-oxoglutarate dehydrogenase, E1 subunit [Chitinophaga pinensis DSM 2588] Length = 922 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 4/173 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD + QG VYE + L + I+++ NNQ T + + + Sbjct: 332 LPILLHGDASITGQGVVYEVLQMEKLKGYHTGGTIHLVINNQVGFTTDYKDSRSSIYCTD 391 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 P V+G D A+ A+ Y + G + I++L YR GH+ SD + Sbjct: 392 LAKITGAPVFHVNGDDAEALVHVTRLALDYRQTFHGDVFIDILCYRKYGHNESDEPKFTQ 451 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 + + +P + ++L+ K EIE + RK + S++ A+ D Sbjct: 452 PVLYKAIDQHPNPRDIYIRQLIAEKSIDVTLPGEIETSFRKQLQASLDEARQD 504 >gi|148692889|gb|EDL24836.1| mCG6358 [Mus musculus] Length = 1031 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 377 AEQFYRGDAQGRKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|145637690|ref|ZP_01793343.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae PittHH] gi|145269092|gb|EDK09042.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae PittHH] Length = 935 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 345 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 404 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 405 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 464 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 465 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 524 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 525 EWREMDTAKM 534 >gi|72001668|ref|NP_506060.2| hypothetical protein ZK836.2 [Caenorhabditis elegans] gi|74966934|sp|Q23629|DHTK1_CAEEL RecName: Full=Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial; Flags: Precursor gi|34555852|emb|CAE46691.1| Hypothetical protein ZK836.2a [Caenorhabditis elegans] gi|34555853|emb|CAB01590.2| Hypothetical protein ZK836.2a [Caenorhabditis elegans] Length = 911 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 4/168 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GDGA QG V+ES ++ + + ++++ NNQ A S + T+ + Sbjct: 316 LNVLVHGDGAFTGQGVVWESIALSQAPHFRLGGTVHLVTNNQIAFTAESSVGRSSTHCTD 375 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +F P + V+G V A+AY + + I ++ +R GH+ D + + Sbjct: 376 IAKAFEYPVIHVNGDHPEEVVKATRLALAYRERFRKDVFINLVCFRRWGHNELDDPTFTS 435 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 E+ + RL+ + +E +KE + +NN ++ Sbjct: 436 PVMYKEVEARESVPRLFLDRLVEEGFTTEEAVKEQLQKHTEQLNNELK 483 >gi|330875696|gb|EGH09845.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967010|gb|EGH67270.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. actinidiae str. M302091] Length = 943 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 338 GSVRARQDRRNDPNGDKVLPISLHGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K I+I+ Sbjct: 398 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|318080795|ref|ZP_07988127.1| alpha-ketoglutarate decarboxylase [Streptomyces sp. SA3_actF] Length = 1112 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + SA+++ Sbjct: 527 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAPPESARSSMYA 584 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD Sbjct: 585 TDVARMIEAPVFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESD 640 >gi|295836533|ref|ZP_06823466.1| oxoglutarate dehydrogenase, E1 component [Streptomyces sp. SPB74] gi|295826083|gb|EFG64663.1| oxoglutarate dehydrogenase, E1 component [Streptomyces sp. SPB74] Length = 1119 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + SA+++ Sbjct: 534 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAPPESARSSMYA 591 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD Sbjct: 592 TDVARMIEAPVFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESD 647 >gi|229846894|ref|ZP_04467001.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae 7P49H1] gi|229810383|gb|EEP46102.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae 7P49H1] Length = 935 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 345 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 404 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 405 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 464 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 465 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 524 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 525 EWREMDTAKM 534 >gi|289679945|ref|ZP_06500835.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. syringae FF5] gi|330980731|gb|EGH78834.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 943 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ I+++ NNQ Sbjct: 338 GSVRARQDRRNDPNGDKVLPISLHGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K I+I+ Sbjct: 398 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVMFVTQLAIDYRMQFKRDIVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|282853781|ref|ZP_06263118.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes J139] gi|282583234|gb|EFB88614.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes J139] Length = 1236 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 652 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 711 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 712 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRQTFHRDVVVDVVCYRRRGHNEGDDPSF 769 >gi|119613488|gb|EAW93082.1| oxoglutarate dehydrogenase-like, isoform CRA_c [Homo sapiens] Length = 959 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 326 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 385 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 386 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 445 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 446 RRGHNEMDEP 455 >gi|297300901|ref|XP_002805676.1| PREDICTED: 2-oxoglutarate dehydrogenase-like, mitochondrial-like [Macaca mulatta] Length = 953 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 320 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 379 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 380 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 439 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 440 RRGHNEMDEP 449 >gi|229845070|ref|ZP_04465206.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae 6P18H1] gi|229812042|gb|EEP47735.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae 6P18H1] Length = 935 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 345 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 404 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 405 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 464 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 465 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 524 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 525 EWREMDTAKM 534 >gi|170722676|ref|YP_001750364.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas putida W619] gi|169760679|gb|ACA73995.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pseudomonas putida W619] Length = 943 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 10/136 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ ++++ NNQ Sbjct: 338 GSVRARQDRRNDTAGDKVLPISIHGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K ++I+ Sbjct: 398 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVID 457 Query: 279 MLTYRYRGHSMSDPAN 294 ++ YR RGH+ +D N Sbjct: 458 LVCYRRRGHNEADEPN 473 >gi|189423864|ref|YP_001951041.1| transketolase [Geobacter lovleyi SZ] gi|189420123|gb|ACD94521.1| Transketolase domain protein [Geobacter lovleyi SZ] Length = 273 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 7/118 (5%) Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 + T NG G HGI +G G+A K + + + V GDG +G ++E AA Sbjct: 112 YETINGSLG-HGI-----GVGCGVALGLKRKGAARHVFVVAGDGEFCEGSMWEGIMFAAH 165 Query: 207 WNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 L N+ VI+NN+ M + F +R +F +VDG D+ AV + + Sbjct: 166 HQLDNLTLVIDNNRLCMLDRCEKIMTVEPFEQRFQAFGWQTERVDGHDMAAVLGALSR 223 >gi|73997963|ref|XP_534945.2| PREDICTED: similar to oxoglutarate dehydrogenase-like [Canis familiaris] Length = 1115 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 482 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 541 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 542 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 601 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 602 RRGHNEMDEP 611 >gi|319896899|ref|YP_004135094.1| 2-oxoglutarate decarboxylase, thiamin-requiring [Haemophilus influenzae F3031] gi|317432403|emb|CBY80758.1| 2-oxoglutarate decarboxylase, thiamin-requiring [Haemophilus influenzae F3031] Length = 935 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 345 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 404 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 405 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 464 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 465 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 524 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 525 EWREMDTAKM 534 >gi|301781730|ref|XP_002926281.1| PREDICTED: 2-oxoglutarate dehydrogenase-like, mitochondrial-like isoform 2 [Ailuropoda melanoleuca] Length = 953 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 320 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 379 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 380 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 439 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 440 RRGHNEMDEP 449 >gi|148825797|ref|YP_001290550.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae PittEE] gi|148715957|gb|ABQ98167.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae PittEE] Length = 935 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 345 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 404 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 405 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 464 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 465 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 524 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 525 EWREMDTAKM 534 >gi|32251021|gb|AAP74191.1| PdhA [Lactobacillus reuteri] Length = 117 Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 3/61 (4%) Query: 270 AHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 A GP++IE LTYR+ HS + DP+ YR R++ N S+ DP+ ++RK L SE Sbjct: 3 AGNGPVLIETLTYRFGAHSSAGDDPSRYRPRKKKNH-GSDKDPLIRLRKYLTKKGLWSED 61 Query: 328 D 328 + Sbjct: 62 E 62 >gi|312194709|ref|YP_004014770.1| 2-oxoglutarate dehydrogenase, E1 subunit [Frankia sp. EuI1c] gi|311226045|gb|ADP78900.1| 2-oxoglutarate dehydrogenase, E1 subunit [Frankia sp. EuI1c] Length = 1245 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N++ L ++++ NNQ TS + + + + Sbjct: 658 LPVLVHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHLVINNQVGFTTSPTESRSSVYATD 717 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 P V+G D A A Y A ++I+M+ YR RGH+ D ++ Sbjct: 718 VARMVQAPIFHVNGDDPEACVRVAALAFDYREAFHKDVVIDMICYRRRGHNEMDEPSF 775 >gi|254234686|ref|ZP_04928009.1| 2-oxoglutarate dehydrogenase (E1 subunit) [Pseudomonas aeruginosa C3719] gi|126166617|gb|EAZ52128.1| 2-oxoglutarate dehydrogenase (E1 subunit) [Pseudomonas aeruginosa C3719] Length = 943 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 11/159 (6%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS--DKICVVCF-GDGA-ANQGQ 196 GG +H+ F H + + V G+ A ++ + S DK+ + GD A A QG Sbjct: 315 GGEVHL---ALAFNPSHLEIVSPVVEGSVRARQDRRKDSSGDKVVPISIHGDAAFAGQGV 371 Query: 197 VYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGM 252 V E+F ++ A I+++ NNQ TS + T ++ P V+G Sbjct: 372 VMETFQMSQTRAYKTGGTIHLVINNQVGFTTSRQDDARSTEYATDVAKMIQAPIFHVNGD 431 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 D AV AV Y K ++I+++ YR RGH+ +D Sbjct: 432 DPEAVLFVTQLAVDYRMQFKRDVVIDLVCYRRRGHNEAD 470 >gi|299771133|ref|YP_003733159.1| transketolase, N-terminal subunit [Acinetobacter sp. DR1] gi|298701221|gb|ADI91786.1| transketolase, N-terminal subunit [Acinetobacter sp. DR1] Length = 283 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 7/118 (5%) Query: 156 GHGIVGAQVSLGTGIA----FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G I G + G GIA K ++SD DG N+G +E+ A+ W L N Sbjct: 118 GMEITGGSLGHGLGIAVGACLGLKQKKSDAFVYNLLSDGELNEGSTWEAVMSASHWKLDN 177 Query: 211 VIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 +I +I+ NNQ A G S S A R SF +VDG ++ A+ D+A Y Sbjct: 178 LIAIIDVNNQQADGHS-SEILAFEPIVDRWQSFGWYTQRVDGNNMEALLEAFDQARNY 234 >gi|291401996|ref|XP_002717557.1| PREDICTED: dehydrogenase E1 and transketolase domain containing 1 [Oryctolagus cuniculus] Length = 920 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 14/146 (9%) Query: 177 RRSDK-ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASA 231 R DK IC+ GD + QG V E+F ++ L + + +++I NNQ T R + Sbjct: 321 RPGDKVICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSVHLIVNNQLGYTTPAERGRS 380 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS--- 288 S G + V+G V A Y R + +I+++L YR GH+ Sbjct: 381 SLYSSDIGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRRFRKDVIVDLLCYRQWGHNELD 440 Query: 289 ---MSDPANY---RTREEINEMRSNH 308 ++P Y R R+ I + + H Sbjct: 441 EPFFTNPVMYKIIRARKSIPDTYAEH 466 >gi|269219839|ref|ZP_06163693.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Actinomyces sp. oral taxon 848 str. F0332] gi|269210744|gb|EEZ77084.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Actinomyces sp. oral taxon 848 str. F0332] Length = 1300 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E N++ L +++I NNQ T+ + S Sbjct: 669 LPILVHGDAAFAGQGVVPEVLNLSQLRGYRTGGTVHIIVNNQIGFTTAPHSGRSSNYASD 728 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 IP V+G D AV A Y +A I++++ YR RGH SM+ Sbjct: 729 VAKGLQIPIFHVNGDDPEAVVRAAALAYEYRQAFSKDAIVDVVCYRRRGHNEGDDPSMTQ 788 Query: 292 PANY 295 P Y Sbjct: 789 PVMY 792 >gi|15596782|ref|NP_250276.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas aeruginosa PAO1] gi|116049530|ref|YP_791666.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas aeruginosa UCBPP-PA14] gi|218892458|ref|YP_002441325.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas aeruginosa LESB58] gi|254239933|ref|ZP_04933255.1| 2-oxoglutarate dehydrogenase (E1 subunit) [Pseudomonas aeruginosa 2192] gi|296390041|ref|ZP_06879516.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas aeruginosa PAb1] gi|313106598|ref|ZP_07792825.1| 2-oxoglutarate dehydrogenase E1 subunit [Pseudomonas aeruginosa 39016] gi|9947548|gb|AAG04974.1|AE004586_12 2-oxoglutarate dehydrogenase (E1 subunit) [Pseudomonas aeruginosa PAO1] gi|115584751|gb|ABJ10766.1| 2-oxoglutarate dehydrogenase E1 subunit [Pseudomonas aeruginosa UCBPP-PA14] gi|126193311|gb|EAZ57374.1| 2-oxoglutarate dehydrogenase (E1 subunit) [Pseudomonas aeruginosa 2192] gi|218772684|emb|CAW28469.1| 2-oxoglutarate dehydrogenase (E1 subunit) [Pseudomonas aeruginosa LESB58] gi|310879327|gb|EFQ37921.1| 2-oxoglutarate dehydrogenase E1 subunit [Pseudomonas aeruginosa 39016] Length = 943 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 11/159 (6%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS--DKICVVCF-GDGA-ANQGQ 196 GG +H+ F H + + V G+ A ++ + S DK+ + GD A A QG Sbjct: 315 GGEVHL---ALAFNPSHLEIVSPVVEGSVRARQDRRKDSSGDKVVPISIHGDAAFAGQGV 371 Query: 197 VYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGM 252 V E+F ++ A I+++ NNQ TS + T ++ P V+G Sbjct: 372 VMETFQMSQTRAYKTGGTIHLVINNQVGFTTSRQDDARSTEYATDVAKMIQAPIFHVNGD 431 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 D AV AV Y K ++I+++ YR RGH+ +D Sbjct: 432 DPEAVLFVTQLAVDYRMQFKRDVVIDLVCYRRRGHNEAD 470 >gi|309972943|gb|ADO96144.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae R2846] Length = 935 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 345 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 404 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 405 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 464 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 465 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 524 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 525 EWREMDTAKM 534 >gi|309750760|gb|ADO80744.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae R2866] Length = 935 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 345 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 404 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 405 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 464 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 465 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 524 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 525 EWREMDTAKM 534 >gi|281204594|gb|EFA78789.1| oxoglutarate dehydrogenase [Polysphondylium pallidum PN500] Length = 881 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 10/165 (6%) Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA---FANKYRRSDKICVVCFGDGA-AN 193 K GG +H+ +N H V LG A + N R +C++ GD A A Sbjct: 234 KVDGGKVHVSLMQNP---SHLEAVDPVCLGKTRAKQFYTNDQSRDRSVCLMLHGDAAFAG 290 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD 250 QG V E+ +++ L ++++ NNQ T + S G P + V+ Sbjct: 291 QGVVTETLSLSQLPGFTAGGAVHIVVNNQLGFTTIPLNGRSTRYSSDIGKFVGCPIILVN 350 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + AV AV Y K III+++ +R GH+ D ++ Sbjct: 351 SQNPEAVDRVCRLAVEYRNQFKKDIIIDLIGWRKYGHNEVDEPSF 395 >gi|221316665|ref|NP_001137468.1| 2-oxoglutarate dehydrogenase-like, mitochondrial isoform b [Homo sapiens] gi|194383236|dbj|BAG59174.1| unnamed protein product [Homo sapiens] Length = 953 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 320 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 379 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 380 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 439 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 440 RRGHNEMDEP 449 >gi|318060256|ref|ZP_07978979.1| alpha-ketoglutarate decarboxylase [Streptomyces sp. SA3_actG] Length = 1163 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + SA+++ Sbjct: 578 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAPPESARSSMYA 635 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD Sbjct: 636 TDVARMIEAPVFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESD 691 >gi|158261475|dbj|BAF82915.1| unnamed protein product [Homo sapiens] Length = 1010 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 377 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|187956864|gb|AAI57972.1| Ogdhl protein [Mus musculus] gi|187957750|gb|AAI57971.1| Ogdhl protein [Mus musculus] Length = 1010 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 377 AEQFYRGDAQGRKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|29421218|dbj|BAA86604.2| KIAA1290 protein [Homo sapiens] Length = 1011 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 378 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 437 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 438 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 497 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 498 RRGHNEMDEP 507 >gi|296119466|ref|ZP_06838024.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Corynebacterium ammoniagenes DSM 20306] gi|295967349|gb|EFG80616.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Corynebacterium ammoniagenes DSM 20306] Length = 1257 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 13/134 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD + A G + E+ N++ L ++++ NNQ T+ + + + Sbjct: 666 VPLMLHGDASFAGLGVIQETINLSQLRGYTTGGTVHIVVNNQIGFTTTPDSSRSTYYSTD 725 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 F+ P V+G D AV A Y R + I++L YR RGH SM+ Sbjct: 726 LAKGFDCPVFHVNGDDPEAVVWVGQLATEYRRRFGKDVFIDLLCYRLRGHNEADDPSMTQ 785 Query: 292 PANYRTREEINEMR 305 P Y ++IN+ R Sbjct: 786 PVLY---DKINDHR 796 >gi|291404055|ref|XP_002718388.1| PREDICTED: oxoglutarate dehydrogenase-like isoform 1 [Oryctolagus cuniculus] Length = 1010 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 377 AEQFYRGDAQGRKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|301781728|ref|XP_002926280.1| PREDICTED: 2-oxoglutarate dehydrogenase-like, mitochondrial-like isoform 1 [Ailuropoda melanoleuca] gi|281343971|gb|EFB19555.1| hypothetical protein PANDA_015912 [Ailuropoda melanoleuca] Length = 1006 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 373 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 432 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 433 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 492 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 493 RRGHNEMDEP 502 >gi|148827083|ref|YP_001291836.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae PittGG] gi|148718325|gb|ABQ99452.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus influenzae PittGG] Length = 935 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 345 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 404 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 405 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 464 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 465 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 524 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 525 EWREMDTAKM 534 >gi|109088964|ref|XP_001107041.1| PREDICTED: 2-oxoglutarate dehydrogenase-like, mitochondrial-like isoform 2 [Macaca mulatta] Length = 1010 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 377 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|325123212|gb|ADY82735.1| 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex (E1) [Acinetobacter calcoaceticus PHEA-2] Length = 950 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 313 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRRDIGGDDVLPVIVHGDAAFAG 366 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V +++I NNQ TS R + T + + P V Sbjct: 367 QGVNMETFQMSQTRGYTVGGTVHIIVNNQVGFTTSDPRDARSTEYCTDVAKMIQAPIFHV 426 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +G D AV A + + ++I++ YR RGH+ +D Sbjct: 427 NGDDPEAVIFATQLAHDFRHEFRKDVVIDLFCYRRRGHNEAD 468 >gi|319776090|ref|YP_004138578.1| 2-oxoglutarate decarboxylase, thiamin-requiring [Haemophilus influenzae F3047] gi|317450681|emb|CBY86901.1| 2-oxoglutarate decarboxylase, thiamin-requiring [Haemophilus influenzae F3047] Length = 935 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 345 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 404 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 405 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 464 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 465 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 524 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 525 EWREMDTAKM 534 >gi|307546564|ref|YP_003899043.1| transketolase, subunit A [Halomonas elongata DSM 2581] gi|307218588|emb|CBV43858.1| transketolase, subunit A [Halomonas elongata DSM 2581] Length = 276 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 14/157 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + +G G A K ++ D V GDG +G +E+ AA L N+ +I+ Sbjct: 120 GPLGHGLPVGVGAAIGAKLQKQDWEVFVVVGDGEIQEGSNWEAAMTAAHKKLDNLTLIID 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ G ++ ++R +F ++VDG D A + +A+ R P Sbjct: 180 RNRLQQGDRTHDVTSLEPLAERFSAFGWDALEVDGHDY----AALIEALTAPRVADKPRC 235 Query: 277 IEMLTYRYRGHSMSD---------PANYRTREEINEM 304 + T++ +G S P+ + E +NE+ Sbjct: 236 LVANTFKGKGVSFIQDRVEWHHKVPSPEQVEEALNEL 272 >gi|255284125|ref|ZP_05348680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bryantella formatexigens DSM 14469] gi|255265299|gb|EET58504.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bryantella formatexigens DSM 14469] Length = 621 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 8/115 (6%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G + K G M F + + F GH +S G G A A R D Sbjct: 80 LTGRREGFETLRKYGGMSGFPKRKESNCDAFDTGHS--STSISAGLGYAMARDLRGGDNY 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 V GDGA G +E+ N AA + N I V+ +N ++ +V S N + Sbjct: 138 VVSVIGDGALTGGMAWEAMNNAARLDSNFIIVLNDNNMSISENVGGLSNYLNMVR 192 >gi|254468450|ref|ZP_05081856.1| transketolase [beta proteobacterium KB13] gi|207087260|gb|EDZ64543.1| transketolase [beta proteobacterium KB13] Length = 271 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G+ +G +G + + +GIA A K ++ K V GDG ++G +E+ +A L N Sbjct: 112 GYETINGSLGHGIGVSSGIAIALKKQKISKKVFVLVGDGELHEGSNWEAIMLAGQLKLSN 171 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKA 264 ++ +++NN+ +M N S++ F +V DG +R V + ++K Sbjct: 172 LVVLLDNNKISMLDKTDNIINHRNLSQKMKEFGWETFEVKDGHSVREVYSALNKT 226 >gi|157819765|ref|NP_001099532.1| 2-oxoglutarate dehydrogenase-like, mitochondrial [Rattus norvegicus] gi|149034147|gb|EDL88917.1| oxoglutarate dehydrogenase-like (predicted), isoform CRA_a [Rattus norvegicus] gi|149034148|gb|EDL88918.1| oxoglutarate dehydrogenase-like (predicted), isoform CRA_a [Rattus norvegicus] Length = 1029 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 377 AEQFYRGDAQGRKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|221316661|ref|NP_060715.2| 2-oxoglutarate dehydrogenase-like, mitochondrial isoform a [Homo sapiens] gi|160419019|sp|Q9ULD0|OGDHL_HUMAN RecName: Full=2-oxoglutarate dehydrogenase-like, mitochondrial; AltName: Full=2-oxoglutarate dehydrogenase complex component E1-like; Short=OGDC-E1-like; AltName: Full=Alpha-ketoglutarate dehydrogenase-like; Flags: Precursor gi|119613487|gb|EAW93081.1| oxoglutarate dehydrogenase-like, isoform CRA_b [Homo sapiens] gi|168269802|dbj|BAG10028.1| oxoglutarate dehydrogenase-like [synthetic construct] Length = 1010 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 377 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|7023145|dbj|BAA91855.1| unnamed protein product [Homo sapiens] Length = 1010 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 377 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|239502285|ref|ZP_04661595.1| alpha-ketoglutarate decarboxylase [Acinetobacter baumannii AB900] Length = 946 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 309 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRRDIGGDDVLPVIVHGDAAFAG 362 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V +++I NNQ TS R + T + + P V Sbjct: 363 QGVNMETFQMSQTRGYTVGGTVHIIVNNQVGFTTSDPRDARSTEYCTDVAKMIQAPIFHV 422 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +G D AV A + + ++I++ YR RGH+ +D Sbjct: 423 NGDDPEAVIFATQLAHDFRHEFRKDVVIDLFCYRRRGHNEAD 464 >gi|197335361|ref|YP_002155585.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Vibrio fischeri MJ11] gi|197316851|gb|ACH66298.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Vibrio fischeri MJ11] Length = 938 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 15/164 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG +H+ F H + V +G+ A + R +DK I + GD A A Q Sbjct: 312 GGDVHL---ALAFNPSHLEIVNPVVIGS--VRARQDRLNDKAGDKVIPITIHGDSAIAGQ 366 Query: 195 GQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVD 250 G V E+FN++ A + I ++ NNQ TS + + T + + P V+ Sbjct: 367 GVVAETFNMSQARAFYVGGTIRIVVNNQVGFTTSNPKDTRSTQYCTDIAKMVQAPIFHVN 426 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 427 ADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|207080140|ref|NP_001128819.1| DKFZP459M2028 protein [Pongo abelii] gi|55729626|emb|CAH91542.1| hypothetical protein [Pongo abelii] Length = 1024 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 391 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 450 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 451 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 510 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 511 RRGHNEMDEP 520 >gi|332862920|ref|XP_003318014.1| PREDICTED: oxoglutarate dehydrogenase-like [Pan troglodytes] Length = 953 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 320 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 379 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 380 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 439 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 440 RRGHNEMDEP 449 >gi|301170420|emb|CBW30026.1| 2-oxoglutarate decarboxylase, thiamin-requiring [Haemophilus influenzae 10810] Length = 935 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 345 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 404 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 405 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 464 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 465 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 524 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 525 EWREMDTAKM 534 >gi|291404059|ref|XP_002718390.1| PREDICTED: oxoglutarate dehydrogenase-like isoform 3 [Oryctolagus cuniculus] Length = 953 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 320 AEQFYRGDAQGRKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 379 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 380 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 439 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 440 RRGHNEMDEP 449 >gi|20072238|gb|AAH26320.1| Oxoglutarate dehydrogenase-like [Homo sapiens] gi|325463527|gb|ADZ15534.1| oxoglutarate dehydrogenase-like [synthetic construct] Length = 1010 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 377 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|59711430|ref|YP_204206.1| alpha-ketoglutarate decarboxylase [Vibrio fischeri ES114] gi|59479531|gb|AAW85318.1| 2-oxoglutarate decarboxylase, thiamin-requiring [Vibrio fischeri ES114] Length = 938 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 15/164 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG +H+ F H + V +G+ A + R +DK I + GD A A Q Sbjct: 312 GGDVHL---ALAFNPSHLEIVNPVVIGS--VRARQDRLNDKAGDKVIPITIHGDSAIAGQ 366 Query: 195 GQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVD 250 G V E+FN++ A + I ++ NNQ TS + + T + + P V+ Sbjct: 367 GVVAETFNMSQARAFYVGGTIRIVVNNQVGFTTSNPKDTRSTQYCTDIAKMVQAPIFHVN 426 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 427 ADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|169632624|ref|YP_001706360.1| 2-oxoglutarate dehydrogenase E1 component [Acinetobacter baumannii SDF] gi|169151416|emb|CAP00147.1| 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex (E1) [Acinetobacter baumannii] Length = 946 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 309 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRRDIGGDDVLPVIVHGDAAFAG 362 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V +++I NNQ TS R + T + + P V Sbjct: 363 QGVNMETFQMSQTRGYTVGGTVHIIVNNQVGFTTSDPRDARSTEYCTDVAKMIQAPIFHV 422 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +G D AV A + + ++I++ YR RGH+ +D Sbjct: 423 NGDDPEAVIFATQLAHDFRHEFRKDVVIDLFCYRRRGHNEAD 464 >gi|124487483|ref|NP_001074599.1| 2-oxoglutarate dehydrogenase-like, mitochondrial [Mus musculus] Length = 1029 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 396 AEQFYRGDAQGRKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 455 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 456 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 515 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 516 RRGHNEMDEP 525 >gi|194383468|dbj|BAG64705.1| unnamed protein product [Homo sapiens] Length = 801 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 168 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 227 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 228 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 287 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 288 RRGHNEMDEP 297 >gi|169794946|ref|YP_001712739.1| 2-oxoglutarate dehydrogenase E1 component [Acinetobacter baumannii AYE] gi|184159275|ref|YP_001847614.1| 2-oxoglutarate dehydrogenase E1 component [Acinetobacter baumannii ACICU] gi|213157649|ref|YP_002320447.1| 2-oxoglutarate dehydrogenase, E1 component [Acinetobacter baumannii AB0057] gi|215482494|ref|YP_002324680.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter baumannii AB307-0294] gi|260557313|ref|ZP_05829529.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter baumannii ATCC 19606] gi|301346635|ref|ZP_07227376.1| 2-oxoglutarate dehydrogenase E1 component [Acinetobacter baumannii AB056] gi|301512700|ref|ZP_07237937.1| 2-oxoglutarate dehydrogenase E1 component [Acinetobacter baumannii AB058] gi|169147873|emb|CAM85736.1| 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex (E1) [Acinetobacter baumannii AYE] gi|183210869|gb|ACC58267.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Acinetobacter baumannii ACICU] gi|193078181|gb|ABO13128.2| 2-oxoglutarate decarboxylase component of the 2-oxoglutarate dehydrogenase complex (E1) [Acinetobacter baumannii ATCC 17978] gi|213056809|gb|ACJ41711.1| 2-oxoglutarate dehydrogenase, E1 component [Acinetobacter baumannii AB0057] gi|213986345|gb|ACJ56644.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter baumannii AB307-0294] gi|260409419|gb|EEX02721.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter baumannii ATCC 19606] Length = 946 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 309 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRRDIGGDDVLPVIVHGDAAFAG 362 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V +++I NNQ TS R + T + + P V Sbjct: 363 QGVNMETFQMSQTRGYTVGGTVHIIVNNQVGFTTSDPRDARSTEYCTDVAKMIQAPIFHV 422 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +G D AV A + + ++I++ YR RGH+ +D Sbjct: 423 NGDDPEAVIFATQLAHDFRHEFRKDVVIDLFCYRRRGHNEAD 464 >gi|94984248|ref|YP_603612.1| alpha-ketoglutarate decarboxylase [Deinococcus geothermalis DSM 11300] gi|94554529|gb|ABF44443.1| 2-oxoglutarate dehydrogenase, E1 component [Deinococcus geothermalis DSM 11300] Length = 986 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 21/175 (12%) Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA- 191 + GG MH+ F H + + V G+ A + RR D + + GD A Sbjct: 335 RTPGGPMHL---ALAFNPSHLEIVSPVVHGS--VRARQDRRGDTERKQVLPITVHGDAAV 389 Query: 192 ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGM 247 + QG V E+ N++ L + ++ NNQ S R + + + N P + Sbjct: 390 SGQGVVMETLNLSRLRGFTTGGAVRIVINNQIGFTVSDPRDTRSSRYCTDVAKIANAPVL 449 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSDPANYR 296 V+G D AV D A+ Y + + I+++++R GH +M+ P YR Sbjct: 450 HVNGDDPEAVAFCGDLALEYRQTFGKDVFIDLISFRRHGHNEADDPTMTQPIMYR 504 >gi|291404057|ref|XP_002718389.1| PREDICTED: oxoglutarate dehydrogenase-like isoform 2 [Oryctolagus cuniculus] Length = 1020 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 387 AEQFYRGDAQGRKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 446 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 447 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 506 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 507 RRGHNEMDEP 516 >gi|302521898|ref|ZP_07274240.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Streptomyces sp. SPB78] gi|302430793|gb|EFL02609.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Streptomyces sp. SPB78] Length = 1273 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + SA+++ Sbjct: 688 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAPPESARSSMYA 745 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD Sbjct: 746 TDVARMIEAPVFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESD 801 >gi|329123254|ref|ZP_08251822.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus aegyptius ATCC 11116] gi|327471463|gb|EGF16911.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus aegyptius ATCC 11116] Length = 950 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 5/190 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N S + + GD A A QG V E+ N++ +V I ++ NNQ TS Sbjct: 360 NDTEHSKVLAITVHGDSAVAGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPND 419 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P + V+G D AV AV Y K I I++++YR GH+ Sbjct: 420 TRSTEYCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHN 479 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 +D + ++ + P + RL+ +E + E+ + R ++N Sbjct: 480 EADEPLATQPMMYSIIKKHPTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVS 539 Query: 349 SDKEPDPAEL 358 +E D A++ Sbjct: 540 EWREMDTAKM 549 >gi|297300898|ref|XP_001106974.2| PREDICTED: 2-oxoglutarate dehydrogenase-like, mitochondrial-like isoform 1 [Macaca mulatta] Length = 1037 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 404 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 463 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 464 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 523 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 524 RRGHNEMDEP 533 >gi|332854235|ref|ZP_08435255.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter baumannii 6013150] gi|332866322|ref|ZP_08436927.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter baumannii 6013113] gi|332872537|ref|ZP_08440506.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter baumannii 6014059] gi|322509189|gb|ADX04643.1| sucA [Acinetobacter baumannii 1656-2] gi|323519217|gb|ADX93598.1| 2-oxoglutarate dehydrogenase E1 component [Acinetobacter baumannii TCDC-AB0715] gi|332728160|gb|EGJ59548.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter baumannii 6013150] gi|332734670|gb|EGJ65774.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter baumannii 6013113] gi|332739223|gb|EGJ70081.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter baumannii 6014059] Length = 950 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 313 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRRDIGGDDVLPVIVHGDAAFAG 366 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V +++I NNQ TS R + T + + P V Sbjct: 367 QGVNMETFQMSQTRGYTVGGTVHIIVNNQVGFTTSDPRDARSTEYCTDVAKMIQAPIFHV 426 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +G D AV A + + ++I++ YR RGH+ +D Sbjct: 427 NGDDPEAVIFATQLAHDFRHEFRKDVVIDLFCYRRRGHNEAD 468 >gi|315633946|ref|ZP_07889235.1| 2-oxoglutarate dehydrogenase E1 component [Aggregatibacter segnis ATCC 33393] gi|315477196|gb|EFU67939.1| 2-oxoglutarate dehydrogenase E1 component [Aggregatibacter segnis ATCC 33393] Length = 934 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 12/201 (5%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGAAN-QGQVYESFNIAA 205 F H + + V +G+ A + R+ D + V GD A QG V E+ N++ Sbjct: 319 AFNPSHLEIVSPVVIGS--VRARQTRKQDTEHNKVLAVTVHGDSAVTGQGIVQETLNMSN 376 Query: 206 LWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATM 261 V I ++ NNQ TS + T F + P + V+G D AV Sbjct: 377 ARGYKVGGTIRIVINNQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAA 436 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHN 321 AV Y K I I++++YR GH+ +D ++ + P + RL+ Sbjct: 437 RMAVEYRAVFKRDIFIDLISYRRHGHNEADEPLATQPMMYGIIKKHPTPPKVYANRLIQE 496 Query: 322 KWASEGDLKEIEMNVRKIINN 342 +E D EI R ++N Sbjct: 497 GVITEEDATEISNLYRDALDN 517 >gi|297300903|ref|XP_002805677.1| PREDICTED: 2-oxoglutarate dehydrogenase-like, mitochondrial-like [Macaca mulatta] Length = 801 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 168 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 227 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 228 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 287 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 288 RRGHNEMDEP 297 >gi|289642886|ref|ZP_06475021.1| 2-oxoglutarate dehydrogenase, E1 subunit [Frankia symbiont of Datisca glomerata] gi|289507269|gb|EFD28233.1| 2-oxoglutarate dehydrogenase, E1 subunit [Frankia symbiont of Datisca glomerata] Length = 1251 Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 9/117 (7%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRASAQTNFSK 237 V+ GD A A QG V E+ N++ L ++++ NNQ TS SR+S Sbjct: 670 VLIHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHLVINNQVGFTTSPVSSRSSVYATDVA 729 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 R V P V+G D A AV + +A ++I+M+ YR RGH+ M +P+ Sbjct: 730 RMV--QAPIFHVNGDDPEACVRVARLAVEFRQAFHKDVVIDMVCYRRRGHNEMDEPS 784 >gi|12803319|gb|AAH02477.1| Dehydrogenase E1 and transketolase domain containing 1 [Homo sapiens] Length = 919 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 15/163 (9%) Query: 161 GAQVSLGTG-IAFANKYRRSDK-ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYV 214 G Q SL G + N + D+ IC+ GD + QG V E+F ++ L + + +++ Sbjct: 303 GRQQSLQDGDYSPDNSAQPGDRVICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSVHL 362 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 I NNQ T R + S G + V+G V A Y R + Sbjct: 363 IVNNQLGYTTPAERGRSSLYCSDIGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKD 422 Query: 275 IIIEMLTYRYRGHSMSDPANY---------RTREEINEMRSNH 308 +II++L YR GH+ D Y R R+ I + + H Sbjct: 423 VIIDLLCYRQWGHNELDEPFYTNPIMYKIIRARKSIPDTYAEH 465 >gi|197097422|ref|NP_001126195.1| 2-oxoglutarate dehydrogenase-like, mitochondrial [Pongo abelii] gi|55730670|emb|CAH92056.1| hypothetical protein [Pongo abelii] Length = 1013 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 377 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|333024461|ref|ZP_08452525.1| putative alpha-ketoglutarate decarboxylase [Streptomyces sp. Tu6071] gi|332744313|gb|EGJ74754.1| putative alpha-ketoglutarate decarboxylase [Streptomyces sp. Tu6071] Length = 1273 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + SA+++ Sbjct: 688 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAPPESARSSMYA 745 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD Sbjct: 746 TDVARMIEAPVFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESD 801 >gi|260549005|ref|ZP_05823227.1| oxoglutarate dehydrogenase [Acinetobacter sp. RUH2624] gi|260408173|gb|EEX01644.1| oxoglutarate dehydrogenase [Acinetobacter sp. RUH2624] Length = 946 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 309 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRRDIGGDDVLPVIVHGDAAFAG 362 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V +++I NNQ TS R + T + + P V Sbjct: 363 QGVNMETFQMSQTRGYTVGGTVHIIVNNQVGFTTSDPRDARSTEYCTDVAKMIQAPIFHV 422 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +G D AV A + + ++I++ YR RGH+ +D Sbjct: 423 NGDDPEAVIFATQLAHDFRHEFRKDVVIDLFCYRRRGHNEAD 464 >gi|261856268|ref|YP_003263551.1| deoxyxylulose-5-phosphate synthase [Halothiobacillus neapolitanus c2] gi|261836737|gb|ACX96504.1| deoxyxylulose-5-phosphate synthase [Halothiobacillus neapolitanus c2] Length = 643 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 10/129 (7%) Query: 100 TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 T D++I ++ +GH + G + M+ L R G IS G + + S + F GH Sbjct: 72 TPDDRLIWDVGHQSYGHKMLTG--RREAMSGLRTRDG-IS---GFTRRVESDFDPFGAGH 125 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 +S G+A A K R D V GDGA GQ +E+ N A N++ V+ + Sbjct: 126 S--STSISAALGMAVAAKLRGEDHHAVAVIGDGALTAGQAFEALNHAGDMKANLLVVLND 183 Query: 218 NQYAMGTSV 226 N+ ++ +V Sbjct: 184 NEMSISRNV 192 >gi|300794321|ref|NP_001179635.1| 2-oxoglutarate dehydrogenase-like, mitochondrial [Bos taurus] gi|297491629|ref|XP_002699017.1| PREDICTED: oxoglutarate dehydrogenase-like isoform 1 [Bos taurus] gi|296472030|gb|DAA14145.1| oxoglutarate dehydrogenase-like isoform 1 [Bos taurus] Length = 1010 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 377 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|117924366|ref|YP_864983.1| transketolase subunit A [Magnetococcus sp. MC-1] gi|117608122|gb|ABK43577.1| transketolase subunit A [Magnetococcus sp. MC-1] Length = 277 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 1/102 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +SL G+A A K + + GDG N+G V+E+ AA L N++ VI+ Sbjct: 124 GALGHGLSLAAGMALAAKLKGASWRVFALMGDGEINEGSVWEAALFAAKHQLNNLVAVID 183 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 N+ +S + + +F +VDG D+ A++ Sbjct: 184 YNKLQSYGPISAVQGLEPLADKWRAFGFGVQEVDGHDVGALR 225 >gi|332078367|emb|CCA65694.1| Hypothetical protein ZK836.2b [Caenorhabditis elegans] Length = 787 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 4/168 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GDGA QG V+ES ++ + + ++++ NNQ A S + T+ + Sbjct: 192 LNVLVHGDGAFTGQGVVWESIALSQAPHFRLGGTVHLVTNNQIAFTAESSVGRSSTHCTD 251 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +F P + V+G V A+AY + + I ++ +R GH+ D + + Sbjct: 252 IAKAFEYPVIHVNGDHPEEVVKATRLALAYRERFRKDVFINLVCFRRWGHNELDDPTFTS 311 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 E+ + RL+ + +E +KE + +NN ++ Sbjct: 312 PVMYKEVEARESVPRLFLDRLVEEGFTTEEAVKEQLQKHTEQLNNELK 359 >gi|293610896|ref|ZP_06693195.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826548|gb|EFF84914.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 950 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 313 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRRDIGGDDVLPVIVHGDAAFAG 366 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V +++I NNQ TS R + T + + P V Sbjct: 367 QGVNMETFQMSQTRGYTVGGTVHIIVNNQVGFTTSDPRDARSTEYCTDVAKMIQAPIFHV 426 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +G D AV A + + ++I++ YR RGH+ +D Sbjct: 427 NGDDPEAVIFATQLAHDFRHEFRKDVVIDLFCYRRRGHNEAD 468 >gi|242768620|ref|XP_002341606.1| alpha-ketoglutarate dehydrogenase complex subunit Kgd1, putative [Talaromyces stipitatus ATCC 10500] gi|218724802|gb|EED24219.1| alpha-ketoglutarate dehydrogenase complex subunit Kgd1, putative [Talaromyces stipitatus ATCC 10500] Length = 1057 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 4/116 (3%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + ++++ NNQ T A + S Sbjct: 436 VLLHGDAAFAAQGIVYETMGFHSLPAYSTGGTVHIVVNNQIGFTTDPRFARSTPYCSDIA 495 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + + P V+G D+ AV A + K ++I+++ YR +GH+ +D ++ Sbjct: 496 KAIDAPVFHVNGDDVEAVNYVCQVAADWRAEFKRDVVIDIVCYRKQGHNETDQPSF 551 >gi|221316669|ref|NP_001137469.1| 2-oxoglutarate dehydrogenase-like, mitochondrial isoform c [Homo sapiens] gi|119613486|gb|EAW93080.1| oxoglutarate dehydrogenase-like, isoform CRA_a [Homo sapiens] Length = 801 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 168 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 227 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 228 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 287 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 288 RRGHNEMDEP 297 >gi|156741514|ref|YP_001431643.1| 2-oxoglutarate dehydrogenase E1 component [Roseiflexus castenholzii DSM 13941] gi|156232842|gb|ABU57625.1| 2-oxoglutarate dehydrogenase, E1 subunit [Roseiflexus castenholzii DSM 13941] Length = 953 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 18/183 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG V E+ N+A L + I++I NNQ TS + S Sbjct: 366 LPILIHGDAAFPGQGIVAETLNLANLAGYSTGGTIHIIVNNQIGFTTSPREGRSTLYASD 425 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 F IP + V+ D+ A A AY +I+++ YR GH+ D + T Sbjct: 426 LAKGFEIPIVHVNADDVEGCIAVARMAYAYRERFGKDFLIDLVGYRRWGHNEGDEPAF-T 484 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWAS----EGDLKEIEMN-VRKIINNSVEFAQSDKE 352 + + + + H + + +WAS EG + E N + + + ++ A+S+ E Sbjct: 485 QPTMYTIIARHPTVRE--------QWASKLIAEGVISAEESNQMMTTVWDRLQQARSEAE 536 Query: 353 PDP 355 P Sbjct: 537 AHP 539 >gi|330937083|gb|EGH41153.1| transketolase [Pseudomonas syringae pv. pisi str. 1704B] Length = 255 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 84/213 (39%), Gaps = 15/213 (7%) Query: 70 GQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIM 126 GQ+ G G VG G L + + E +Q Y GH A + A+ I Sbjct: 2 GQVQGQGYVGQALGAADLLAVSYFHALNYRPEDPEWEQRDRFYLSIGH-YAIALYAALIE 60 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FANKYRRSDKI 182 AE+ + G S S + G I G + G GIA K + S Sbjct: 61 AEIIPLDELETYGSDDSRLPMSGMATYTPGMEITGGSLGHGLGIAVGACLGLKRKNSSAF 120 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGV 240 DG N+G +E+ A+ W L N+I +I+ NNQ A G S S A R Sbjct: 121 VYNLLSDGELNEGSTWEAAMSASHWKLDNLIAIIDVNNQQADGHS-SEVLAFEPIVDRWQ 179 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 +F +VDG D+ A+ A D A R H G Sbjct: 180 AFGWFTQRVDGNDLDALVAAFDNA----RQHAG 208 >gi|262369426|ref|ZP_06062754.1| alpha-ketoglutarate decarboxylase [Acinetobacter johnsonii SH046] gi|262315494|gb|EEY96533.1| alpha-ketoglutarate decarboxylase [Acinetobacter johnsonii SH046] Length = 944 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 18/166 (10%) Query: 140 KGGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-A 192 +GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 312 QGGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRKDIGGDDVLPVIVHGDAAFA 365 Query: 193 NQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQ 248 QG E+F ++ V ++++ NNQ TS R + T + + P Sbjct: 366 GQGVNQETFQMSQTRGYTVGGTVHIVVNNQVGFTTSDPRDARSTEYCTDIAKMIQAPIFH 425 Query: 249 VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 V+G D +V A + + ++I+M YR RGH+ +D PA Sbjct: 426 VNGDDPESVLFVAQLAHDFRHTFRKDVVIDMFCYRRRGHNEADEPA 471 >gi|254804309|ref|YP_003082530.1| 1-deoxy-D-xylulose 5-phosphate synthase [Neisseria meningitidis alpha14] gi|254667851|emb|CBA03886.1| 1-deoxy-D-xylulose 5-phosphate synthase [Neisseria meningitidis alpha14] Length = 637 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKQLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRCSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|262198167|ref|YP_003269376.1| 2-oxoglutarate dehydrogenase, E1 subunit [Haliangium ochraceum DSM 14365] gi|262081514|gb|ACY17483.1| 2-oxoglutarate dehydrogenase, E1 subunit [Haliangium ochraceum DSM 14365] Length = 952 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 7/149 (4%) Query: 164 VSLGTGIAFANKYRRSDKIC---VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 V +G A +++ +D+ C ++ GD A +G V E+ N++ L V ++VI Sbjct: 338 VVMGRVRAKQDRFGDTDRTCGLAILIHGDAAFIGEGVVQETLNMSELDGYAVGGTLHVIV 397 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ T ++ + S P V+G D AV T++ A+ + ++ Sbjct: 398 NNQLGFTTGSDQSRSTVYASDIAKMLQSPIFHVNGEDPEAVAQTIELAMDFRAEFGRDVV 457 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMR 305 I+M YR GH+ D + +E+R Sbjct: 458 IDMYCYRRHGHNEGDEPAFTQPLMYSEIR 486 >gi|260831094|ref|XP_002610494.1| hypothetical protein BRAFLDRAFT_202318 [Branchiostoma floridae] gi|229295861|gb|EEN66504.1| hypothetical protein BRAFLDRAFT_202318 [Branchiostoma floridae] Length = 907 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 6/123 (4%) Query: 177 RRSDKI-CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASA 231 R+ DK+ C+ GD A +QG V E+ +A L + +V ++ I NNQ T R + Sbjct: 297 RQGDKVLCLQIHGDAAFTSQGVVAETLGLADLPHFHVGGTVHFIANNQLGFTTDAERGRS 356 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MS 290 S + + V+G V A++Y + + +I++ML +R GH+ + Sbjct: 357 SRYSSDIAKMIDCAVIHVNGDYPEEVIKATQLAMSYRQTFRKDVIVDMLCFRRWGHNELD 416 Query: 291 DPA 293 DP+ Sbjct: 417 DPS 419 >gi|111225327|ref|YP_716121.1| alpha-ketoglutarate decarboxylase [Frankia alni ACN14a] gi|111152859|emb|CAJ64606.1| 2-oxoglutarate dehydrogenase, E1 component (SucA) [Frankia alni ACN14a] Length = 1288 Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 9/117 (7%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRASAQTNFSK 237 ++ GD A A QG V E+ N++ L I+++ NNQ TS SR+S Sbjct: 698 ILVHGDAAFAGQGVVAETLNLSQLRGYRTGGTIHLVINNQVGFTTSPESSRSSVYATDVA 757 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 R V P V+G D A A Y +A ++I++L YR RGH+ M +P+ Sbjct: 758 RMV--QAPIFHVNGDDPEACVRVAALAFQYRQAFNKDVVIDLLCYRRRGHNEMDEPS 812 >gi|50955456|ref|YP_062744.1| alpha-ketoglutarate decarboxylase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951938|gb|AAT89639.1| 2-oxoglutarate dehydrogenase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 1308 Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 90/242 (37%), Gaps = 38/242 (15%) Query: 119 GVDASKIMAELTGRQGGIS-KGKGGSMHMFSTKNGFYGGHG-----IVGAQVS------- 165 G +I E G Q + +G G + T+ F+G G + A S Sbjct: 642 GKTYGQIFREFEGTQDPRTVQGSGDVKYHLGTEGTFHGAGGEEIPVYLAANPSHLEAVDG 701 Query: 166 LGTGIAFANKYRRSD----KICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIEN 217 + GI A + RR + V+ GD A A QG V E+ ++ L I+V N Sbjct: 702 VLEGIVRAKQDRRPAGTFLTLPVLIHGDAAMAGQGVVVETLQMSQLRAYRTGGTIHVNIN 761 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 NQ T + + + + P V+G D AV A Y + K ++I Sbjct: 762 NQVGFTTPPTESRTSMYSTDVAKTIQAPIFHVNGDDPEAVVRVAQLAFEYRQEFKRDVVI 821 Query: 278 EMLTYRYRGH------SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 +++ YR RGH SM+ P Y E +R RL GD+ E Sbjct: 822 DLVCYRRRGHNEGDDPSMTQPLMYNLIEAKRSVR-----------RLYTEALVGRGDITE 870 Query: 332 IE 333 E Sbjct: 871 EE 872 >gi|317499228|ref|ZP_07957502.1| transketolase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893479|gb|EFV15687.1| transketolase [Lachnospiraceae bacterium 5_1_63FAA] Length = 286 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G S GIA K ++D+ + GDG N+GQ +E+F A + LN + +I+ Sbjct: 120 GSLGQGTSAAAGIATGFKMNKTDQYVYLIVGDGELNEGQCWEAFQYIAHYKLNHCVVIID 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 +N+ + + + + +F V G D A+ +++A Sbjct: 180 DNKKQLDGTTKEVMNPFSIENKMKAFGFYTQTVKGNDEEAIDEAINRA 227 >gi|291560387|emb|CBL39187.1| transketolase subunit A [butyrate-producing bacterium SSC/2] Length = 284 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G S GIA K ++D+ + GDG N+GQ +E+F A + LN + +I+ Sbjct: 118 GSLGQGTSAAAGIATGFKMNKTDQYVYLIVGDGELNEGQCWEAFQYIAHYKLNHCVVIID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 +N+ + + + + +F V G D A+ +++A Sbjct: 178 DNKKQLDGTTKEVMNPFSIENKMKAFGFYTQTVKGNDEEAIDEAINRA 225 >gi|291459863|ref|ZP_06599253.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oribacterium sp. oral taxon 078 str. F0262] gi|291417653|gb|EFE91372.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oribacterium sp. oral taxon 078 str. F0262] Length = 623 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 72/193 (37%), Gaps = 58/193 (30%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +S G GIA A R D V GDGA G YE+ N AA N I Sbjct: 111 FDTGHS--STSISAGLGIAEARDIRGEDFTVVSVIGDGALTGGMAYEALNNAAQMQKNFI 168 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFN----------------------------- 243 V+ +N ++ +V S N + G +N Sbjct: 169 VVLNDNNMSISQNVGGMSRYLNGIRVGKGYNQMKRSVGKFLLSIPSIGKPLIRRLQKTKN 228 Query: 244 ------IPGM-----------QVDGMDIRAVKATMDKAVAYCRAHK--GPIIIEMLTYRY 284 IPGM VDG DIRAV+ + C A K +++ ++T + Sbjct: 229 SIKQLLIPGMLFENMGVTYLGPVDGHDIRAVERVI------CEAKKLNHTVLVHVITKKG 282 Query: 285 RGHSMSD--PANY 295 +G+ ++ P +Y Sbjct: 283 KGYRPAELSPCDY 295 >gi|260464177|ref|ZP_05812370.1| 2-oxoglutarate dehydrogenase, E1 subunit [Mesorhizobium opportunistum WSM2075] gi|259029980|gb|EEW31263.1| 2-oxoglutarate dehydrogenase, E1 subunit [Mesorhizobium opportunistum WSM2075] Length = 995 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG + E ++ L V ++ I NNQ T+ + + Sbjct: 392 RAKVLPLLLHGDAAFAGQGVIAEILGLSGLRGHRVAGTLHFIINNQIGFTTNPRFSRSSP 451 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A+ + P++++M YR GH+ D Sbjct: 452 YPSDVAKMIEAPIFHVNGDDPEAVVHATKVAIEFRMKFHKPVVVDMFCYRRFGHNEGDEP 511 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +R++ ++ +RL+ S+ +L +++ + R + + E Q K P Sbjct: 512 AFTQPIMYRNIRTHKTTVQIYGERLIAEGHISQAELDQMKADWRAHLESEWEVGQHYK-P 570 Query: 354 DPAE 357 + A+ Sbjct: 571 NKAD 574 >gi|156343811|ref|XP_001621123.1| hypothetical protein NEMVEDRAFT_v1g145936 [Nematostella vectensis] gi|156206773|gb|EDO29023.1| predicted protein [Nematostella vectensis] Length = 351 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 8/125 (6%) Query: 177 RRSDKICVVCF---GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 R DK V C GD + A QG V E+ + L + V +++I NNQ T RA Sbjct: 217 RIGDKASVTCLLVHGDASFAGQGIVSETLGMVNLPHYEVGGTVHLIVNNQVGFTTPADRA 276 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS- 288 + S + P + V+G V A+ Y ++ ++++M YR GH+ Sbjct: 277 RSSLYSSDIAKMIDCPTIHVNGNHPEEVARAAMLALEYRMKYRKDVVVDMFCYRRWGHNE 336 Query: 289 MSDPA 293 + DP Sbjct: 337 LDDPT 341 >gi|237742498|ref|ZP_04572979.1| transketolase subunit A [Fusobacterium sp. 4_1_13] gi|229430146|gb|EEO40358.1| transketolase subunit A [Fusobacterium sp. 4_1_13] Length = 270 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + V GDG +GQ++E+ AA + L N+ ++ Sbjct: 116 GSLGQGLSVANGMALNAKMFNENYRTYVILGDGEVQEGQIWEAAMTAAHYKLDNLCAFLD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + +V+ K+ +F +++DG D + + +DKA R KG P Sbjct: 176 SNNLQIDGNVNEIMGVEPLDKKWEAFGWNVIKIDGHDFEQILSALDKA----RECKGKPT 231 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 232 MIIAKTIKGKGVSF 245 >gi|107101018|ref|ZP_01364936.1| hypothetical protein PaerPA_01002048 [Pseudomonas aeruginosa PACS2] Length = 935 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 11/159 (6%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS--DKICVVCF-GDGA-ANQGQ 196 GG +H+ F H + + V G+ A ++ + S DK+ + GD A A QG Sbjct: 307 GGEVHL---ALAFNPSHLEIVSPVVEGSVRARQDRRKDSSGDKVVPISIHGDAAFAGQGV 363 Query: 197 VYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGM 252 V E+F ++ A I+++ NNQ TS + T ++ P V+G Sbjct: 364 VMETFQMSQTRAYKTGGTIHLVINNQVGFTTSRQDDARSTEYATDVAKMIQAPIFHVNGD 423 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 D AV AV Y K ++I+++ YR RGH+ +D Sbjct: 424 DPEAVLFVTQLAVDYRMQFKRDVVIDLVCYRRRGHNEAD 462 >gi|195341704|ref|XP_002037446.1| GM12925 [Drosophila sechellia] gi|194131562|gb|EDW53605.1| GM12925 [Drosophila sechellia] Length = 919 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 22/183 (12%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG E N+A + + V +++I NNQ T R + S Sbjct: 328 VILHGDAAFAGQGINQECLNMAYVPHFEVGGSLHLIVNNQVGFTTPGDRGRSTAYTSDLA 387 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSDPA 293 S P V+G D A+ A Y R + I I++ +R GH + ++P Sbjct: 388 KSIQAPVFHVNGDDPEALTKITSLAFRYQREFRKDIFIDLNCFRRWGHNELDDPTFTNPL 447 Query: 294 NYR---TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 Y+ RE + ++ + EQV SE KE+ K + + A + Sbjct: 448 VYKIVHQRESVPDLYAQQLAKEQV---------LSESKAKEMRDGYMKYLGEELALAPTY 498 Query: 351 KEP 353 + P Sbjct: 499 QPP 501 >gi|160418921|sp|Q5R9L8|OGDHL_PONAB RecName: Full=2-oxoglutarate dehydrogenase-like, mitochondrial; AltName: Full=2-oxoglutarate dehydrogenase complex component E1-like; Short=OGDC-E1-like; AltName: Full=Alpha-ketoglutarate dehydrogenase-like; Flags: Precursor Length = 1010 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 377 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|24651591|ref|NP_733420.1| CG1544, isoform B [Drosophila melanogaster] gi|161079314|ref|NP_001097985.1| CG1544, isoform C [Drosophila melanogaster] gi|23172755|gb|AAN14266.1| CG1544, isoform B [Drosophila melanogaster] gi|158030453|gb|ABW08813.1| CG1544, isoform C [Drosophila melanogaster] Length = 738 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 22/185 (11%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG E N+A + + V +++I NNQ T R + S Sbjct: 145 LNVILHGDAAFAGQGINQECLNMAYVPHFEVGGSLHLIVNNQVGFTTPGDRGRSTAYTSD 204 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 S P V+G D A+ A Y R + I I++ +R GH + ++ Sbjct: 205 LAKSIQAPVFHVNGDDPEALARVTSLAFRYQREFRKDIFIDLNCFRRWGHNELDDPTFTN 264 Query: 292 PANYR---TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 P Y+ RE + ++ + EQV SE KE+ K + + A Sbjct: 265 PLVYKIVHQRESVPDLYAQQLAKEQV---------LSESKAKEMRDEYMKYLGEELALAP 315 Query: 349 SDKEP 353 + + P Sbjct: 316 AYQPP 320 >gi|238603026|ref|XP_002395841.1| hypothetical protein MPER_04039 [Moniliophthora perniciosa FA553] gi|215467257|gb|EEB96771.1| hypothetical protein MPER_04039 [Moniliophthora perniciosa FA553] Length = 469 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 4/109 (3%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ L N I++I+NNQ T A + S+ Sbjct: 334 VLLHGDAAFAGQGVVYETMGFHNLPNYGTGGTIHLIDNNQIGFTTDPRFARSTPYPSEIA 393 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 S + P V+G ++ AV A Y K ++I ++ YR GH+ Sbjct: 394 KSIDAPIFHVNGDNVEAVNFVCQLAADYRAEFKIDVVIYIVCYRRHGHN 442 >gi|30250299|ref|NP_842369.1| alpha-ketoglutarate decarboxylase [Nitrosomonas europaea ATCC 19718] gi|30181094|emb|CAD86286.1| Transketolase:Dehydrogenase, E1 component [Nitrosomonas europaea ATCC 19718] Length = 952 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 16/144 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A ++R DK I V+ GD A A QG V E+ N++ I++I NNQ Sbjct: 341 GSVRARQHRFGDKNGDHVIPVLIHGDAAFAGQGVVMETLNLSQTRGYGTGGTIHIIINNQ 400 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V + P V+G D AV + A + ++I+ Sbjct: 401 IGFTTSDPRDSRSTLYCTDVVKMIDAPVFHVNGDDPEAVVLATEIAFDFRMQFHRDVVID 460 Query: 279 MLTYRYRGHSMSD------PANYR 296 ++ +R +GH+ D P+ YR Sbjct: 461 LVCFRKQGHNEQDEPMVTQPSMYR 484 >gi|119503176|ref|ZP_01625260.1| alpha-ketoglutarate decarboxylase [marine gamma proteobacterium HTCC2080] gi|119460822|gb|EAW41913.1| alpha-ketoglutarate decarboxylase [marine gamma proteobacterium HTCC2080] Length = 959 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 65/287 (22%), Positives = 116/287 (40%), Gaps = 53/287 (18%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYG----MGMVGGFCHLCIGQEAV---------- 91 EF+++Q L R ++ E+ G Y G+ GG + + EA+ Sbjct: 212 EFSRDQRLQVLRRLIKAEGLEKSLGSKYPGTKRFGLEGGESLIPMMSEAIERVGGYGAKE 271 Query: 92 -IVGMKMSLTEGDQMITAYREHGHILA--CGVDASKIMAELTGR-----QGGISKGKGGS 143 ++GM A+R ++L G + +++ E GR G + +G S Sbjct: 272 IVIGM------------AHRGRLNVLINILGKNPTELFDEFEGRAEYSGSGDVKYHQGFS 319 Query: 144 MHMFSTKN------GFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA- 191 ++ ++ F H + + V G+ A + RR D + +V GD A Sbjct: 320 SNVMTSGGEVHLALAFNPSHLEIVSPVVEGS--VRARQDRREDPAGDSVVPIVIHGDAAF 377 Query: 192 ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGM 247 A QG V E+F ++ ++++ NNQ TS + T + + P Sbjct: 378 AGQGVVMETFQMSQTRGYKTGGTLHIVLNNQVGFTTSQRIDARSTEYCTDVAKMVQAPIF 437 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 V+ D AV AV + K ++++++ YR RGH+ +D PA Sbjct: 438 HVNADDPEAVVFVTQLAVDFRNTFKRDVVVDLICYRRRGHNEADEPA 484 >gi|313898287|ref|ZP_07831824.1| Transketolase, thiamine diphosphate binding domain protein [Clostridium sp. HGF2] gi|312956669|gb|EFR38300.1| Transketolase, thiamine diphosphate binding domain protein [Clostridium sp. HGF2] Length = 275 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 9/136 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A ANKY + D GDG +GQV+E+ A+ + L N++ ++ Sbjct: 116 GSLGQGISCAVGMALANKYNKEDHRIYTILGDGECQEGQVWEAAMAASHYKLDNLLAFVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSF--NIPGMQVDGMDIRAVKATMDKAVAYCRAHKG- 273 +N + +V+ T ++ +F N+ ++ +G D+ +V A ++A + KG Sbjct: 176 HNGLQIDGNVTDVMNPTPIDEKFKAFGWNVIVLE-NGNDLESVIAACEEA----KTVKGK 230 Query: 274 PIIIEMLTYRYRGHSM 289 P ++ T + +G S Sbjct: 231 PTVVVAHTVKGKGVSF 246 >gi|300691741|ref|YP_003752736.1| 2-oxoglutarate dehydrogenase E1 component [Ralstonia solanacearum PSI07] gi|299078801|emb|CBJ51461.1| 2-oxoglutarate dehydrogenase E1 component [Ralstonia solanacearum PSI07] Length = 954 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 11/130 (8%) Query: 173 ANKYRRSDK------ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAM 222 A + RR D+ + V GD A A QG V E+ N+A I+++ NNQ Sbjct: 343 ARQERRGDQTGEQEVLAVQVHGDAAFAGQGVVMETLNLAQTRGYGTGGTIHIVINNQIGF 402 Query: 223 GTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 TS R S T + V P + V+G D AV M A+ + K + ++++ Sbjct: 403 TTSDPRDSRSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAMQLAIDFRTEFKKDVAVDIIC 462 Query: 282 YRYRGHSMSD 291 +R GH+ D Sbjct: 463 FRKLGHNEQD 472 >gi|222110170|ref|YP_002552434.1| 1-deoxy-d-xylulose-5-phosphate synthase [Acidovorax ebreus TPSY] gi|254782071|sp|B9MEU8|DXS_DIAST RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|221729614|gb|ACM32434.1| deoxyxylulose-5-phosphate synthase [Acidovorax ebreus TPSY] Length = 629 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 54/179 (30%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G+A A K R ++ CV GDGA G +E+ N A + + N++ ++ +N ++ Sbjct: 125 ISAALGMALAAKQRGDERRCVAIIGDGAMTAGMAFEALNNAGVADANLLVILNDNDMSIS 184 Query: 224 TSV---SRASAQ------------------------------------------TNFSKR 238 V +R AQ T F K Sbjct: 185 PPVGALNRYLAQLMSGQFYAKARDVGKSVLKNAPPLLELAKRLEQQAKGMVVPATLFEKF 244 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANY 295 G ++ P +DG D+ ++ T++ R KGP + ++T + +G+ + +DP Y Sbjct: 245 GFNYIGP---IDGHDLDSLIPTLEN----IRGLKGPQFLHVVTKKGQGYKLAEADPVAY 296 >gi|126642746|ref|YP_001085730.1| 2-oxoglutarate dehydrogenase E1 component [Acinetobacter baumannii ATCC 17978] Length = 890 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 253 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRRDIGGDDVLPVIVHGDAAFAG 306 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V +++I NNQ TS R + T + + P V Sbjct: 307 QGVNMETFQMSQTRGYTVGGTVHIIVNNQVGFTTSDPRDARSTEYCTDVAKMIQAPIFHV 366 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +G D AV A + + ++I++ YR RGH+ +D Sbjct: 367 NGDDPEAVIFATQLAHDFRHEFRKDVVIDLFCYRRRGHNEAD 408 >gi|85711263|ref|ZP_01042322.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Idiomarina baltica OS145] gi|85694764|gb|EAQ32703.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Idiomarina baltica OS145] Length = 934 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 65/278 (23%), Positives = 112/278 (40%), Gaps = 36/278 (12%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILA--CGVDASKIMAELTGRQGGISKGKGG-S 143 G + V++GM A+R ++L G + E G+ +KG G Sbjct: 251 GTQEVVIGM------------AHRGRLNVLVNVLGKKPQDLFDEFAGKHAA-NKGSGDVK 297 Query: 144 MHM-----FSTKNG-------FYGGHGIVGAQVSLGTGIAFANKYR--RSDKIC-VVCFG 188 HM F+T G F H + V +G+ A ++ + + DK+ + G Sbjct: 298 YHMGFSSDFATPGGDVHLALAFNPSHLEIVNPVVMGSVRARMDRLQDPKGDKVLPITIHG 357 Query: 189 DGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFN 243 D A A QG V E+FN++ V + V+ NNQ TS + T + + Sbjct: 358 DAAIAGQGIVQETFNMSKTRAYQVGGSVRVVVNNQVGFTTSKQEDARSTQYCTDIAKMVQ 417 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINE 303 P V+ D AV A+ + K ++I+++ YR GH+ +D + + Sbjct: 418 APIFHVNADDPEAVVFVTQLALDFRNTFKRDVVIDLVCYRRHGHNEADEPSATQPLMYAK 477 Query: 304 MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 ++ + P E +RL SE D K+ + R ++ Sbjct: 478 VKKHPVPREIYAERLSKANVVSEDDAKQWVQDYRDALD 515 >gi|225025779|ref|ZP_03714971.1| hypothetical protein EUBHAL_00004 [Eubacterium hallii DSM 3353] gi|224956898|gb|EEG38107.1| hypothetical protein EUBHAL_00004 [Eubacterium hallii DSM 3353] Length = 279 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 7/135 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K R GDG +GQV+E+ A L N++ +++ Sbjct: 115 GSLGQGISAAVGMALSAKLRNKSYRVYTLLGDGEIQEGQVWEAAMFAGARKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + + + K+ +FN + V DG D +D A R KG P Sbjct: 175 NNGLQIDGKIEDVCSPYPIDKKFEAFNFHVINVADGNDFD----QLDAAFKEAREVKGMP 230 Query: 275 IIIEMLTYRYRGHSM 289 + I M T + +G S Sbjct: 231 VAIVMKTVKGKGVSF 245 >gi|125833335|ref|XP_687615.2| PREDICTED: 2-oxoglutarate dehydrogenase-like, mitochondrial-like [Danio rerio] Length = 1008 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 16/177 (9%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + I+V+ NNQ Sbjct: 376 AEQFYRGDTEGRRVMSILMHGDAAFAGQGVVYETFHLSELPSYTTYGTIHVVVNNQIGFT 435 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++I+++ YR Sbjct: 436 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVMYVCKIAAEWRTTFNKDVVIDLVCYR 495 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG--DLKEIEMNVRK 338 GH+ D + ++R E V K+ +K SEG L+E E V K Sbjct: 496 RFGHNEMDEPMFTQPLMYKQIRKQ----EHVLKKYA-DKLISEGVVTLQEFEEEVAK 547 >gi|15834944|ref|NP_296703.1| alpha-ketoglutarate decarboxylase [Chlamydia muridarum Nigg] gi|270285116|ref|ZP_06194510.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia muridarum Nigg] gi|270289137|ref|ZP_06195439.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia muridarum Weiss] gi|301336511|ref|ZP_07224713.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydia muridarum MopnTet14] gi|7190366|gb|AAF39188.1| 2-oxoglutarate dehydrogenase, E1 component [Chlamydia muridarum Nigg] Length = 905 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 10/173 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + V+ GD A + QG VYE+F ++ + + ++++ NNQ T+ R S T + + Sbjct: 318 LAVLMHGDAALSGQGIVYETFQLSGIPGYSTEGTLHIVVNNQIGF-TAHPRESRSTPYCT 376 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 IP +V+G D+ A ++ A+ +II++ YR GH+ SD + Sbjct: 377 DIAKMMGIPVFRVNGDDVLACLQVIEYAMRVRNRFHCDVIIDLCCYRKYGHNESDDPSVT 436 Query: 297 TREEINEMRSNHDPIEQVRKRLLH-NKWA-SEGDLKEIEMNVRKIINNSVEFA 347 E++ ++RL+ W S +L +I+ + ++N EFA Sbjct: 437 APFLYEEIKKKQPVSLLFKERLISCPDWQISPQELDKIDEEIEHVLNQ--EFA 487 >gi|332258252|ref|XP_003278213.1| PREDICTED: 2-oxoglutarate dehydrogenase-like, mitochondrial [Nomascus leucogenys] Length = 920 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++V+ NNQ Sbjct: 377 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|295698451|ref|YP_003603106.1| 2-oxoglutarate dehydrogenase, E1 component [Candidatus Riesia pediculicola USDA] gi|291157166|gb|ADD79611.1| 2-oxoglutarate dehydrogenase, E1 component [Candidatus Riesia pediculicola USDA] Length = 939 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 20/185 (10%) Query: 142 GSMHMFSTKN-------GFYGGHGIVGAQVSLGTGIAFANKYRRSDK--ICVVCFGDGAA 192 G +F +N F H + V +G + +K +++ + + + GD + Sbjct: 299 GGFSIFKIRNKTIELNLSFNPSHLEIVNPVVMGMTRGYIDKLKKNPEEILSITIHGDASV 358 Query: 193 -NQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFN-IPGM 247 QG V E+ N+ + +V I +I NNQ TS + + F P Sbjct: 359 IGQGVVQETINLYKIEGYSVGGTIRIILNNQIGFTTSKKDFLRSSRYCTDIFKFTQFPIF 418 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD------PANYRTREEI 301 V+ DI +V A+ + + K +II+++ YR RGHS D P YR+ ++ Sbjct: 419 HVNADDIESVIFVSRLALDFRKKFKKDVIIDLVGYRRRGHSEIDDPKATQPIMYRSIDQH 478 Query: 302 NEMRS 306 N +S Sbjct: 479 NTSKS 483 >gi|225010862|ref|ZP_03701330.1| Transketolase domain protein [Flavobacteria bacterium MS024-3C] gi|225005070|gb|EEG43024.1| Transketolase domain protein [Flavobacteria bacterium MS024-3C] Length = 721 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 28/247 (11%) Query: 131 GRQGG-----ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK---- 181 GRQ G S K GS + ++ AQ+ G+A A+K RS+K Sbjct: 30 GRQMGGHFVTHSLHKDGSWKNLTKQHNSSADISPTAAQMPRLLGLAQASKVYRSEKNIDS 89 Query: 182 ---------ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 + G+ + ++G +E+ N + + ++ I +++Y + + + Sbjct: 90 DLFSVQGNEVAWGTIGNASTSEGLFFETINAGGVLQVPMVVSIWDDEYGISVHAKHQTTK 149 Query: 233 TNFSKRGVSFNIPG-------MQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM--LTYR 283 N S+ F +V+G D A+ T +A R P+II + LT + Sbjct: 150 ENISELLKGFQKEEGTNGYEIFKVNGWDYPALVKTYQEAAQIAREKHVPVIIHVKELT-Q 208 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +GHS S ++ D + R +L + +A E L EIE ++++ + N+ Sbjct: 209 PQGHSTSGSHERYKSDDRLIWEKEQDCNVKFRAWILESGFADEESLLEIEKDIKRDVRNA 268 Query: 344 VEFAQSD 350 + A S+ Sbjct: 269 KKEAWSE 275 >gi|126740517|ref|ZP_01756204.1| 2-oxoglutarate dehydrogenase, E1 component [Roseobacter sp. SK209-2-6] gi|126718318|gb|EBA15033.1| 2-oxoglutarate dehydrogenase, E1 component [Roseobacter sp. SK209-2-6] Length = 983 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 36/184 (19%), Positives = 82/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E F ++ L ++++ NNQ T+ + + Sbjct: 383 RTKVMPILLHGDAAFAGQGVVAECFALSGLKGHKTGGTMHIVVNNQIGFTTAPHFSRSSP 442 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+G D AV A + + +++++ YR GH+ D Sbjct: 443 YPTDNALVVEAPIFHVNGDDPEAVVHAAKVATEFRQKFGRDVVLDIFCYRRFGHNEGDEP 502 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +++ + + +RL+ + EG++++++ + ++N E + D +P Sbjct: 503 MFTNPLMYKKIKGHKTTLSLYTERLVKDGLIPEGEIEDMKAAFQAMLNEEFEIGK-DYKP 561 Query: 354 DPAE 357 + A+ Sbjct: 562 NKAD 565 >gi|126340412|ref|XP_001367890.1| PREDICTED: similar to dehydrogenase E1 and transketolase domain containing 1 [Monodelphis domestica] Length = 923 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 13/135 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + I++I NNQ T R + S Sbjct: 330 ICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSIHLIVNNQLGYTTPAERGRSSLYCSD 389 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G + V A+ Y R + II+++L YR GH+ ++ Sbjct: 390 IGKIVGCAVIHVNGDNPEEVVRATRLAMEYQRQFRKDIIVDLLCYRQWGHNELDEPFFTN 449 Query: 292 PANY---RTREEINE 303 P Y R+R+ I + Sbjct: 450 PVMYKIIRSRKSIPD 464 >gi|311104845|ref|YP_003977698.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Achromobacter xylosoxidans A8] gi|310759534|gb|ADP14983.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Achromobacter xylosoxidans A8] Length = 955 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 27/183 (14%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR D + V+ GD A A QG V E+ N+A ++++ NNQ Sbjct: 340 GSVRARQERRGDAEGKQVLPVLVHGDAAFAGQGVVMETLNLAQTRGYGTGGTLHIVINNQ 399 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P V+G D AV A+ Y + + I+++ Sbjct: 400 IGFTTSDPRDSRSTLYCTDVVKMIEAPVFHVNGDDPEAVVFVTKLALDYRQQFRHDIVVD 459 Query: 279 MLTYRYRGH------SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 ++ +R GH S++ P Y+ R H P ++L +K ++G L E Sbjct: 460 IVCFRKLGHNEQDTPSLTQPLMYK--------RIGHHP---GTRKLYADKLTTQGVLAEG 508 Query: 333 EMN 335 E + Sbjct: 509 EAD 511 >gi|296434477|sp|Q96HY7|DHTK1_HUMAN RecName: Full=Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; AltName: Full=Dehydrogenase E1 and transketolase domain-containing protein 1; Flags: Precursor Length = 919 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + +++I NNQ T R + S Sbjct: 326 ICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSVHLIVNNQLGYTTPAERGRSSLYCSD 385 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY-- 295 G + V+G V A Y R + +II++L YR GH+ D Y Sbjct: 386 IGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIIDLLCYRQWGHNELDEPFYTN 445 Query: 296 -------RTREEINEMRSNH 308 R R+ I + + H Sbjct: 446 PIMYKIIRARKSIPDTYAEH 465 >gi|307265941|ref|ZP_07547489.1| Transketolase domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306919005|gb|EFN49231.1| Transketolase domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 281 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 2/120 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G ++LG G+A A K + + V GDG +G +E+ AA + L N+I +++ Sbjct: 120 GSLGHGIALGVGMALAAKMDKKEYRVFVITGDGELQEGSNWEAAMTAAYYGLDNLIVIVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N +G + +++ SF +DG DI + +K + + + II Sbjct: 180 RNMLQLGDFTENITRLEPLAEKWKSFGWCVEIIDGHDIEKLLTAFNK-IPFVKGQPSVII 238 >gi|119606733|gb|EAW86327.1| dehydrogenase E1 and transketolase domain containing 1 [Homo sapiens] Length = 919 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + +++I NNQ T R + S Sbjct: 326 ICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSVHLIVNNQLGYTTPAERGRSSLYCSD 385 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY-- 295 G + V+G V A Y R + +II++L YR GH+ D Y Sbjct: 386 IGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIIDLLCYRQWGHNELDEPFYTN 445 Query: 296 -------RTREEINEMRSNH 308 R R+ I + + H Sbjct: 446 PIMYKIIRARKSIPDTYAEH 465 >gi|220925500|ref|YP_002500802.1| transketolase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219950107|gb|ACL60499.1| Transketolase domain protein [Methylobacterium nodulans ORS 2060] Length = 294 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 2/130 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S G G+A+ + D V GDG +GQV+E+ +A L+ +I +++ Sbjct: 134 GSIGHALSAGAGMAWGGRAAGRDFNVFVMLGDGEMQEGQVWEAALFSAHHKLSKLIAIVD 193 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + +V ++ SF VDG D+ A+ A + + A K P+ Sbjct: 194 RNGFQLDGAVDEVMGVEPLDEKWRSFGWETHLVDGHDLMALTALLRRLRA-DDTRKTPVC 252 Query: 277 IEMLTYRYRG 286 + T + +G Sbjct: 253 VIARTLKGKG 262 >gi|15677702|ref|NP_274863.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis MC58] gi|13124129|sp|Q9JXV7|DXS_NEIMB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|7227124|gb|AAF42201.1| 1-deoxyxylulose-5-phosphate synthase [Neisseria meningitidis MC58] gi|316985479|gb|EFV64426.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis H44/76] gi|325139526|gb|EGC62066.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis CU385] gi|325200924|gb|ADY96379.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis H44/76] Length = 637 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|257063624|ref|YP_003143296.1| transketolase subunit A [Slackia heliotrinireducens DSM 20476] gi|256791277|gb|ACV21947.1| transketolase subunit A [Slackia heliotrinireducens DSM 20476] Length = 278 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 26/108 (24%), Positives = 54/108 (50%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + +++ GDG +GQV+E+ +A NL N++ +++ Sbjct: 116 GSLGQGLSIAAGMACGLKLKGAEQTVYTLLGDGECQEGQVWEAAMFSAHRNLDNLVAIVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 +N+ + ++ + + + +F DG D+ AV T+ A Sbjct: 176 HNKLQIDGNIEDVCSPEDLGDKFRAFGWQVFVCDGNDMEAVMDTLTSA 223 >gi|38788380|ref|NP_061176.3| probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial precursor [Homo sapiens] gi|14044064|gb|AAH07955.1| Dehydrogenase E1 and transketolase domain containing 1 [Homo sapiens] Length = 919 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + +++I NNQ T R + S Sbjct: 326 ICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSVHLIVNNQLGYTTPAERGRSSLYCSD 385 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY-- 295 G + V+G V A Y R + +II++L YR GH+ D Y Sbjct: 386 IGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIIDLLCYRQWGHNELDEPFYTN 445 Query: 296 -------RTREEINEMRSNH 308 R R+ I + + H Sbjct: 446 PIMYKIIRARKSIPDTYAEH 465 >gi|73666884|ref|YP_302900.1| alpha-ketoglutarate decarboxylase [Ehrlichia canis str. Jake] gi|72394025|gb|AAZ68302.1| 2-oxoglutarate dehydrogenase E1 component [Ehrlichia canis str. Jake] Length = 912 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 38/172 (22%), Positives = 78/172 (45%), Gaps = 6/172 (3%) Query: 184 VVCFGDGAA-NQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD + QG V E+ ++ L VI++I NNQ T+ + + S Sbjct: 325 ILVHGDASVIGQGVVAETLTLSNLTGYGICGVIHIIVNNQIGFTTNPKDSRSSFYCSDIA 384 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + P V+G + A + AV Y + ++I+++ YR GH+ D + Sbjct: 385 KLIDAPVFHVNGDSPEDIVAAIKLAVEYRQKFNKDVVIDIVCYRRYGHNEGDEPLFTQPV 444 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + + + P++ +++L++ +E + K ++ ++ S EF QS+K Sbjct: 445 MYDCITKHKTPMKLYKEQLINENIITEEECKVLQTEFNNML--SEEFVQSEK 494 >gi|10047337|dbj|BAB13456.1| KIAA1630 protein [Homo sapiens] Length = 901 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + +++I NNQ T R + S Sbjct: 338 ICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSVHLIVNNQLGYTTPAERGRSSLYCSD 397 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY-- 295 G + V+G V A Y R + +II++L YR GH+ D Y Sbjct: 398 IGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIIDLLCYRQWGHNELDEPFYTN 457 Query: 296 -------RTREEINEMRSNH 308 R R+ I + + H Sbjct: 458 PIMYKIIRARKSIPDTYAEH 477 >gi|325127524|gb|EGC50450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis N1568] Length = 635 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAALGMAAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|104782661|ref|YP_609159.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas entomophila L48] gi|95111648|emb|CAK16369.1| 2-oxoglutarate dehydrogenase, E1 component [Pseudomonas entomophila L48] Length = 943 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 10/136 (7%) Query: 169 GIAFANKYRRSDKI-----CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ ++++ NNQ Sbjct: 338 GSVRARQDRRNDTVGDKVLPISIHGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S + T ++ P + V+G D AV AV Y K ++I+ Sbjct: 398 VGFTISNPLDARSTEYATDVAKMIQAPILHVNGDDPEAVLFVTQLAVDYRMQFKRDVVID 457 Query: 279 MLTYRYRGHSMSDPAN 294 ++ YR RGH+ +D N Sbjct: 458 LVCYRRRGHNEADEPN 473 >gi|25012444|gb|AAN71328.1| RE22749p [Drosophila melanogaster] Length = 919 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 22/185 (11%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG E N+A + + V +++I NNQ T R + S Sbjct: 326 LNVILHGDAAFAGQGINQECLNMAYVPHFEVGGSLHLIVNNQVGFTTPGDRGRSTAYTSD 385 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 S P V+G D A+ A Y R + I I++ +R GH + ++ Sbjct: 386 LAKSIQAPVFHVNGDDPEALARVTSLAFRYQREFRKDIFIDLNCFRRWGHNELDDPTFTN 445 Query: 292 PANYR---TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 P Y+ RE + ++ + EQV SE KE+ K + + A Sbjct: 446 PLVYKIVHQRESVPDLYAQQLAKEQV---------LSESKAKEMRDEYMKYLGEELALAP 496 Query: 349 SDKEP 353 + + P Sbjct: 497 AYQPP 501 >gi|88607339|ref|YP_505440.1| alpha-ketoglutarate decarboxylase [Anaplasma phagocytophilum HZ] gi|88598402|gb|ABD43872.1| 2-oxoglutarate dehydrogenase, E1 component [Anaplasma phagocytophilum HZ] Length = 905 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 4/112 (3%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A QG V E NI + +++++ NNQ TS + A S Sbjct: 323 VLVHGDAAFIGQGVVAEGLNIGGVEGYTTGGIVHIVVNNQVGFTTSPNSARTSLYCSDVA 382 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + P V+G D AV A A+ Y K ++I+++ YR GH+ D Sbjct: 383 RIIDAPVFHVNGDDPEAVVAVTKLAMEYRDKFKKDVVIDVVCYRRYGHNEGD 434 >gi|73949148|ref|XP_535192.2| PREDICTED: similar to dehydrogenase E1 and transketolase domain containing protein 1 [Canis familiaris] Length = 1115 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + +++I NNQ T R + S Sbjct: 522 ICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSVHLIVNNQLGYTTPAERGRSSLYCSD 581 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G V A Y R + +I+++L YR GH+ ++ Sbjct: 582 IGKLVGCAIIHVNGDSPEEVVRATQLAFEYQRQFRKDVIVDLLCYRQWGHNELDEPFFTN 641 Query: 292 PANY---RTREEINEMRSNH 308 P Y R R+ I + + H Sbjct: 642 PVMYKIIRARKSIPDTYAEH 661 >gi|52425410|ref|YP_088547.1| alpha-ketoglutarate decarboxylase [Mannheimia succiniciproducens MBEL55E] gi|52307462|gb|AAU37962.1| SucA protein [Mannheimia succiniciproducens MBEL55E] Length = 933 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGAA-NQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+ N+++ V I ++ NNQ TS +R + T + + Sbjct: 352 LPITVHGDSAVIGQGVVQETLNMSSTRGYTVGGTIRIVINNQIGFTTSNTRDTRSTEYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P + V+G D AV AV Y K I I++++YR GH+ +D Sbjct: 412 DIAKMIEAPVIHVNGDDPEAVAYAARMAVEYRTLFKRDIFIDLVSYRRHGHNEAD 466 >gi|288961626|ref|YP_003451936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azospirillum sp. B510] gi|288913906|dbj|BAI75392.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azospirillum sp. B510] Length = 637 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 12/168 (7%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + GG + F+ + + F GH +S G G+A A+K + + Sbjct: 86 LTGRRDRIRTLRMGGGLSGFTKRSESDHDPFGAGHS--STSISAGLGMAVASKMKGERRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN---FSKRG 239 + GDGA + G YE+ N AA +I ++ +N ++ V SA + SK Sbjct: 144 VIAVIGDGAMSAGMAYEAMNNAASTKSRLIVILNDNDMSIAPPVGAMSAYLSRLISSKPY 203 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH-KGPIIIEMLTYRYRG 286 +S ++ R ++ +A Y R G + E L + Y G Sbjct: 204 LSLRHLAKEIADQLPRPLRNAARRAEEYARGMVTGGTLFEELGFYYIG 251 >gi|317483777|ref|ZP_07942718.1| transketolase [Bilophila wadsworthia 3_1_6] gi|316924970|gb|EFV46115.1| transketolase [Bilophila wadsworthia 3_1_6] Length = 272 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A + R D GDG +GQ++E+ A L N++ +++ Sbjct: 118 GSLGQGLSAAVGMALAARMERKDYRVYCIVGDGEQQEGQIWEAAMYAGSQELDNLVVLVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA-HKGPI 275 +N + +A KR +F + +DG + ++A A+ + R K P Sbjct: 178 DNGMQIDDYTDAINAVRPLDKRWEAFGWATLCIDGHNFSDLEA----ALTHARTIKKRPT 233 Query: 276 IIEMLTYRYRGHSMSD 291 I M T + +G S+++ Sbjct: 234 AIIMATVKGKGLSVAE 249 >gi|296220118|ref|XP_002756166.1| PREDICTED: 2-oxoglutarate dehydrogenase-like, mitochondrial isoform 2 [Callithrix jacchus] Length = 953 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++++ NNQ Sbjct: 320 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHIVVNNQIGFT 379 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 380 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 439 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 440 RRGHNEMDEP 449 >gi|24651589|ref|NP_651849.1| CG1544, isoform A [Drosophila melanogaster] gi|74867960|sp|Q9VA02|DHTK1_DROME RecName: Full=Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial; Flags: Precursor gi|23172754|gb|AAF57126.2| CG1544, isoform A [Drosophila melanogaster] Length = 919 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 22/185 (11%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG E N+A + + V +++I NNQ T R + S Sbjct: 326 LNVILHGDAAFAGQGINQECLNMAYVPHFEVGGSLHLIVNNQVGFTTPGDRGRSTAYTSD 385 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 S P V+G D A+ A Y R + I I++ +R GH + ++ Sbjct: 386 LAKSIQAPVFHVNGDDPEALARVTSLAFRYQREFRKDIFIDLNCFRRWGHNELDDPTFTN 445 Query: 292 PANYR---TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 P Y+ RE + ++ + EQV SE KE+ K + + A Sbjct: 446 PLVYKIVHQRESVPDLYAQQLAKEQV---------LSESKAKEMRDEYMKYLGEELALAP 496 Query: 349 SDKEP 353 + + P Sbjct: 497 AYQPP 501 >gi|67924560|ref|ZP_00517977.1| Transketolase, N terminal [Crocosphaera watsonii WH 8501] gi|67853590|gb|EAM48932.1| Transketolase, N terminal [Crocosphaera watsonii WH 8501] Length = 285 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 16/145 (11%) Query: 147 FSTKNGFYGGH-------------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 F +G GGH G +G +S+G G A + ++D V GDG + Sbjct: 105 FCQVDGILGGHPEYGKVPGVEASTGSLGHGLSIGIGFALNARIDKADYRTFVILGDGESQ 164 Query: 194 QGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 +G ++E+ A L N+ +++ N++ S + + + +F ++VDG Sbjct: 165 EGSIWEAAMCAGKHRLSNLTVLMDYNKHQSYGSTTEVQDLEPLADKWRAFGFAAVEVDGH 224 Query: 253 DIRAVKATMDKAVAYCRAHKGPIII 277 D+ A++ + + HK II Sbjct: 225 DVTALRDVLSQVP--LETHKPTAII 247 >gi|325201494|gb|ADY96948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis M01-240149] gi|325207474|gb|ADZ02926.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis NZ-05/33] Length = 637 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|326794795|ref|YP_004312615.1| 2-oxoglutarate dehydrogenase, E1 subunit [Marinomonas mediterranea MMB-1] gi|326545559|gb|ADZ90779.1| 2-oxoglutarate dehydrogenase, E1 subunit [Marinomonas mediterranea MMB-1] Length = 947 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDKI-----CVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQ 219 G A + RR+DK+ + GD A A QG V E+F ++ A ++++ NNQ Sbjct: 341 GSVRARQDRRNDKVGKTVVPISIHGDAAFAGQGVVMETFQMSQTRAYKTGGTVHIVINNQ 400 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 T+ S T ++ P + V+G D AV A+ Y ++I+ Sbjct: 401 VGFTTNRQEDSRSTEYATDVAKMIQAPILHVNGDDPEAVLFVTQLALDYRYEFGRDVVID 460 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 461 LVCYRRRGHNETD 473 >gi|254672659|emb|CBA06487.1| 1-deoxy-D-xylulose 5-phosphate synthase [Neisseria meningitidis alpha275] Length = 637 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAALGMAAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|254670993|emb|CBA07736.1| 1-deoxy-D-xylulose 5-phosphate synthase [Neisseria meningitidis alpha153] Length = 637 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|219670741|ref|YP_002461176.1| transketolase [Desulfitobacterium hafniense DCB-2] gi|219541001|gb|ACL22740.1| Transketolase domain protein [Desulfitobacterium hafniense DCB-2] Length = 277 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 15/159 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + D V GDG +GQV+E+ AA + L NV V++ Sbjct: 116 GSLGQGLSAANGMALAGKADKKDFRVYVVLGDGEMAEGQVWEAAMAAAHYKLDNVTAVLD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + + A + +F ++VDG ++ + A A A + KG P Sbjct: 176 YNGLQIDGTTDNVMASDPLDDKWRAFGWHVIEVDGHNMEELLA----AFAEAKTIKGKPT 231 Query: 276 IIEMLTYRYRGHSMSD---------PANYRTREEINEMR 305 I+ T + +G S + P+ + + + E+R Sbjct: 232 ILIARTVKGKGVSFMENQVGWHGNAPSAEQAEQALKELR 270 >gi|325143761|gb|EGC66078.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis M01-240013] Length = 637 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|308389966|gb|ADO32286.1| putative 1-deoxyxylulose-5-phosphate synthase [Neisseria meningitidis alpha710] Length = 635 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|161869348|ref|YP_001598515.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis 053442] gi|189027779|sp|A9M1G3|DXS_NEIM0 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|161594901|gb|ABX72561.1| 1-deoxyxylulose-5-phosphate synthase [Neisseria meningitidis 053442] Length = 635 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|74056701|gb|AAZ97141.1| 2-oxoglutarate dehydrogenase, E1 component [Thiobacillus denitrificans ATCC 25259] Length = 897 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQ 219 G A + RR D + V+ GD A + QG V ES N++ N I+V+ NNQ Sbjct: 291 GSVRARQDRRGDVLGYEVVPVILHGDAALSGQGVVMESLNMSQTRGFRNGGAIHVVINNQ 350 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R T + + P + V+G D AV + AV Y + I+ Sbjct: 351 IGFTTSDPRDVRSTLYCTDVAKMVEAPVLHVNGDDPEAVAFAVQTAVDYRYTFHKNVFID 410 Query: 279 MLTYRYRGHSMSD 291 ++ YR GH+ D Sbjct: 411 LVCYRRHGHNEQD 423 >gi|303232125|ref|ZP_07318828.1| transketolase, thiamine diphosphate binding domain protein [Veillonella atypica ACS-049-V-Sch6] gi|302513231|gb|EFL55270.1| transketolase, thiamine diphosphate binding domain protein [Veillonella atypica ACS-049-V-Sch6] Length = 278 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 4/130 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K +D GDG +GQV+E+ A + L N+ ++ Sbjct: 121 GSLGQGISAACGMALAGKIDNADYRVYSILGDGELEEGQVWEAAMFAGHYKLNNLTAFVD 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + + + + +F ++V+G DI + +++A A+ GP Sbjct: 181 YNGLQIDGDIEKVMSPLPIPDKFKAFKWNVIEVNGHDIDELHQAIEEAKAFT---DGPTC 237 Query: 277 IEMLTYRYRG 286 I M T + +G Sbjct: 238 IVMHTVKGKG 247 >gi|227828064|ref|YP_002829844.1| transketolase [Sulfolobus islandicus M.14.25] gi|227830801|ref|YP_002832581.1| transketolase [Sulfolobus islandicus L.S.2.15] gi|229579697|ref|YP_002838096.1| Transketolase domain protein [Sulfolobus islandicus Y.G.57.14] gi|229581637|ref|YP_002840036.1| Transketolase domain protein [Sulfolobus islandicus Y.N.15.51] gi|229585333|ref|YP_002843835.1| Transketolase domain protein [Sulfolobus islandicus M.16.27] gi|238620294|ref|YP_002915120.1| Transketolase domain protein [Sulfolobus islandicus M.16.4] gi|284998315|ref|YP_003420083.1| Transketolase domain protein [Sulfolobus islandicus L.D.8.5] gi|227457249|gb|ACP35936.1| Transketolase domain protein [Sulfolobus islandicus L.S.2.15] gi|227459860|gb|ACP38546.1| Transketolase domain protein [Sulfolobus islandicus M.14.25] gi|228010412|gb|ACP46174.1| Transketolase domain protein [Sulfolobus islandicus Y.G.57.14] gi|228012353|gb|ACP48114.1| Transketolase domain protein [Sulfolobus islandicus Y.N.15.51] gi|228020383|gb|ACP55790.1| Transketolase domain protein [Sulfolobus islandicus M.16.27] gi|238381364|gb|ACR42452.1| Transketolase domain protein [Sulfolobus islandicus M.16.4] gi|284446211|gb|ADB87713.1| Transketolase domain protein [Sulfolobus islandicus L.D.8.5] gi|323475156|gb|ADX85762.1| transketolase N-terminal subunit [Sulfolobus islandicus REY15A] gi|323477888|gb|ADX83126.1| transketolase, C-terminal subunit [Sulfolobus islandicus HVE10/4] Length = 281 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 20/166 (12%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A K V GDG ++G+++E+ A + NL N+I IE Sbjct: 132 GSLGQGLSFGIGVATGIKMANGSGRVYVIMGDGEQDEGEIWEAMTHAVVRNLDNLIAFIE 191 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--P 274 N + + S + K + + DG D ++ +++ AHK P Sbjct: 192 MNNFQLDGSTEEIKPKNFLPKVWEAVGWKVLNCDGHDFISITNAINE------AHKASKP 245 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 ++I T R +G + E ++ RS+ D RK LL+ Sbjct: 246 VVIFAKTVRGKG--------FPAIENTHKQRSSPD---DARKYLLN 280 >gi|324500264|gb|ADY40130.1| 2-oxoglutarate dehydrogenase [Ascaris suum] Length = 911 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 7/132 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A +G V E+FN++ L V I+V+ NNQ T + + + Sbjct: 290 MAIIMHGDAALCGEGVVMETFNLSDLKAYTVGGCIHVVVNNQIGFTTDPRASRSSPYCTD 349 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 G P V+ D AV + A + R K +II+++ YR +GH+ D + Sbjct: 350 IGRLVGCPIFHVNSDDPEAVIYVCNVAAEWRRTFKKDVIIDLVCYRRQGHNELDEPMFTQ 409 Query: 298 R---EEINEMRS 306 + I +M+S Sbjct: 410 PLMYQRIKQMKS 421 >gi|325206778|gb|ADZ02231.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis M04-240196] Length = 637 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAALGMAAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|319953291|ref|YP_004164558.1| 1-deoxy-d-xylulose-5-phosphate synthase [Cellulophaga algicola DSM 14237] gi|319421951|gb|ADV49060.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cellulophaga algicola DSM 14237] Length = 600 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 16/142 (11%) Query: 156 GHGIVGAQVSLGTGIAFANKYR-RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G +S G+A A K S+K + GD + G +E+ N A + N++ + Sbjct: 121 GTGHSSTSISAILGMALAAKLDGASEKNHIAVIGDASIASGMAFEALNHAGATDANILII 180 Query: 215 IENNQYAMGTSVSRASAQTNFSKRG----------VSFNIPGMQVDGMDIRAVKATMDKA 264 + +N + SV K+G ++F+ G +DG DI V +T++K Sbjct: 181 LNDNAIGIDPSVGALKKYLTNVKKGTAKDENIFECLNFDYTG-PIDGHDIELVISTLEK- 238 Query: 265 VAYCRAHKGPIIIEMLTYRYRG 286 + KGP ++ ++T + +G Sbjct: 239 ---LKTKKGPKLLHLITTKGKG 257 >gi|73662634|ref|YP_301415.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|85701151|sp|Q49XM5|ODO1_STAS1 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|72495149|dbj|BAE18470.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 933 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 37/175 (21%), Positives = 85/175 (48%), Gaps = 8/175 (4%) Query: 171 AFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV 226 A ++++S + ++ GD A QG +E+ N+ L + +++I NN+ T Sbjct: 341 AVTTEFKKS--MPILIHGDAAYPGQGINFEAMNLGNLEGYSTGGSLHIITNNRIGFTTEP 398 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + T S +++P M V+ ++ A ++ A+A+ + ++I+++ YR G Sbjct: 399 EDGRSTTYSSDVAKGYDVPIMHVNADNVEATIEAIEIAMAFRKEFNKDVVIDLVGYRRYG 458 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKII 340 H+ D + + E+R H+ ++ + K+L++ SE + +I +V+ + Sbjct: 459 HNEMDEPSITNPLQYYEIRK-HESVDILYGKQLVNENIISENQMNQIFDDVQNTL 512 >gi|67538802|ref|XP_663175.1| hypothetical protein AN5571.2 [Aspergillus nidulans FGSC A4] gi|40743086|gb|EAA62276.1| hypothetical protein AN5571.2 [Aspergillus nidulans FGSC A4] gi|259484969|tpe|CBF81643.1| TPA: oxoglutarate dehydrogenase (succinyl-transferring) (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1048 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 4/116 (3%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I+++ NNQ T A + S Sbjct: 427 VLLHGDAAFAAQGIVYETMGFHSLPAYSTGGTIHIVVNNQIGFTTDPRFARSTPYCSDIA 486 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 S + P V+ D+ AV A + K ++I+++ YR +GH+ +D ++ Sbjct: 487 KSIDAPVFHVNADDVEAVNYVCQVAADWRAEFKRDVVIDIVCYRKQGHNETDQPSF 542 >gi|257439730|ref|ZP_05615485.1| 1-deoxy-D-xylulose-5-phosphate synthase [Faecalibacterium prausnitzii A2-165] gi|257197821|gb|EEU96105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Faecalibacterium prausnitzii A2-165] Length = 625 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 22/174 (12%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G +K + G S + F GHG +SL GIA+A K R Sbjct: 83 LTGRREGFAKLRQLDGISGFPNPNESEHDAFIAGHG--NTALSLAVGIAWAKKLRGEPGQ 140 Query: 183 CVVCFGDGAANQGQVYESF-NIAALWNLNVIYVIENNQYAMGTSVS---------RASAQ 232 V GDGA G VYE NI L NL VI + +N+ ++ +V R +++ Sbjct: 141 VVALIGDGAFTGGMVYEGMNNIGGLDNLLVI--LNDNKMSISKNVGALSRYLSHLRTTSR 198 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +K V + G+ V G +++ A + RA + E + + Y G Sbjct: 199 YYDAKENVRSFLDGVPVIGPPLKS--AIQNSKAMVRRAMYHSTMFEDMGFHYYG 250 >gi|237737937|ref|ZP_04568418.1| transketolase [Fusobacterium mortiferum ATCC 9817] gi|229419817|gb|EEO34864.1| transketolase [Fusobacterium mortiferum ATCC 9817] Length = 272 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 5/110 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + + S++ GDG N+GQ +E+ AA L N I+ Sbjct: 115 GSLGQGISAAVGVAIGLQRKNSERKVYCIVGDGELNEGQCWEAIQFAAHNRLKNFTLFID 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 +N+ + + +F K+ SF ++V+G + + DKAV+ Sbjct: 175 DNKKQLDGTTEEICNPFDFIKKMESFGFETIKVNGASVEEI----DKAVS 220 >gi|88811410|ref|ZP_01126665.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Nitrococcus mobilis Nb-231] gi|88791299|gb|EAR22411.1| 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion [Nitrococcus mobilis Nb-231] Length = 764 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 27/171 (15%) Query: 160 VGAQVSLGTGIAFANKY-RRS--------DKICVVCFGDGAANQGQVYESFNIAALWNLN 210 +G+Q+ G+A A RRS D I V FGD + + FN AA W + Sbjct: 171 IGSQLPKAVGMAIAIALARRSGTGLPIPPDAIIVCSFGDASVDHAATQAGFNAAA-WTTH 229 Query: 211 ------VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV---DGMDIRAVKATM 261 ++ V E+N +G S+ + S RG PG++ DG+D+ A A Sbjct: 230 QHLPCPILLVCEDN--GLGISLRPPAGWIEASLRGR----PGIRYFTGDGLDLVAAHAVA 283 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPI 311 AV Y R + P + + R GH+ SD + YR+ +I E DP+ Sbjct: 284 AAAVEYVRRTRQPAFLHLHMQRLLGHAGSDLEDKYRSLAQI-EAGEAQDPL 333 >gi|270008312|gb|EFA04760.1| hypothetical protein TcasGA2_TC030624 [Tribolium castaneum] Length = 1106 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 37/175 (21%), Positives = 82/175 (46%), Gaps = 8/175 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV--SRASAQTNF 235 + ++ GD A QG V+E+ +++ L + ++++ NNQ T SR+SA Sbjct: 452 MSILLHGDAAFCGQGIVFETMHLSDLPDYTTHGTVHIVVNNQIGFTTDPRHSRSSAYCTD 511 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 R V N P V+ D +V + A + ++I+++ YR GH+ D + Sbjct: 512 VARVV--NAPIFHVNSDDPESVMHVCNMAAEWRATFHKDVVIDIVCYRRNGHNEIDEPMF 569 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 ++++ +E+ ++L+ + ++K+++ KI +++E A+ + Sbjct: 570 TQPLMYRKIKNTKSVLEKYSEQLVKENVVTTEEVKDVKAKYEKICEDALESARKE 624 >gi|227548414|ref|ZP_03978463.1| alpha-ketoglutarate decarboxylase [Corynebacterium lipophiloflavum DSM 44291] gi|227079458|gb|EEI17421.1| alpha-ketoglutarate decarboxylase [Corynebacterium lipophiloflavum DSM 44291] Length = 1253 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD + A G V E+ N++ L +V ++++ NNQ T+ + + Sbjct: 661 VPLMLHGDASFAGLGVVQETLNLSNLPGYSVGGTVHIVVNNQIGFTTTPDSGRSTYYATD 720 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 F+ P V+G D A A Y R + I+++ YR RGH+ +D Sbjct: 721 LAKGFDCPVFHVNGDDPEAAAWVAQLATEYRREFGKDVFIDLICYRLRGHNEAD 774 >gi|149201196|ref|ZP_01878171.1| alpha-ketoglutarate decarboxylase [Roseovarius sp. TM1035] gi|149145529|gb|EDM33555.1| alpha-ketoglutarate decarboxylase [Roseovarius sp. TM1035] Length = 986 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 5/188 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R + ++ GD A A QG V E F ++ L I+++ NNQ T+ + Sbjct: 379 NDIDRIKVLPILLHGDAAFAGQGVVAECFGLSGLKGHRTGGTIHIVVNNQIGFTTAPHFS 438 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D A A Y + ++I+M+ YR GH+ Sbjct: 439 RSSPYPTDIALMVEAPIFHVNGDDPEACVHAARVATEYRQKFHKDVVIDMICYRRFGHNE 498 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + +++ + +RL+ + EG++++++ + + + E A Sbjct: 499 GDEPMFTNPVMYKKIKQQKTTLSLYTERLVKDGLIPEGEIEDMKTAFQAYLADEFE-AGK 557 Query: 350 DKEPDPAE 357 D P+ A+ Sbjct: 558 DYRPNKAD 565 >gi|89897614|ref|YP_521101.1| hypothetical protein DSY4868 [Desulfitobacterium hafniense Y51] gi|89337062|dbj|BAE86657.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 289 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 15/159 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + D V GDG +GQV+E+ AA + L NV V++ Sbjct: 128 GSLGQGLSAANGMALAGKADKKDFRVYVVLGDGEMAEGQVWEAAMAAAHYKLDNVTAVLD 187 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + + A + +F ++VDG ++ + A A A + KG P Sbjct: 188 YNGLQIDGTTDNVMASDPLDDKWRAFGWHVIEVDGHNMEELLA----AFAEAKTIKGKPT 243 Query: 276 IIEMLTYRYRGHSMSD---------PANYRTREEINEMR 305 I+ T + +G S + P+ + + + E+R Sbjct: 244 ILIARTVKGKGVSFMENQVGWHGNAPSAEQAEQALKELR 282 >gi|189524737|ref|XP_001338181.2| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial isoform 1 [Danio rerio] Length = 1023 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + I+V+ NNQ T A + + Sbjct: 405 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTIHVVANNQIGFTTDPRMARSSPYPTD 464 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV + A + +++++++YR GH+ M +P Sbjct: 465 VARVVNAPIFHVNADDPEAVMYVCNVAAEWRATFHKDVVVDLVSYRRNGHNEMDEP 520 >gi|86143130|ref|ZP_01061552.1| hypothetical protein MED217_10807 [Leeuwenhoekiella blandensis MED217] gi|85830575|gb|EAQ49034.1| hypothetical protein MED217_10807 [Leeuwenhoekiella blandensis MED217] Length = 803 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/164 (18%), Positives = 79/164 (48%), Gaps = 10/164 (6%) Query: 186 CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIP 245 G+ + ++G +E+ N A + + ++ + ++ Y + + + N S+ F Sbjct: 184 TIGNASTSEGMFFETINAAGVLQVPMVISVWDDDYGISVHAKHQTTKENISEILSGFQRT 243 Query: 246 G-------MQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY-RYRGHSMS-DPANYR 296 ++V G D A+ ++A R P+I+ + + +GHS S Y+ Sbjct: 244 DDDQGYEIIRVKGWDYPALIDAFEQAGKIAREQHVPVILHVTELTQPQGHSTSGSHERYK 303 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 +++ + + HD ++R+ +++N+ A++ +L EIE ++++ + Sbjct: 304 SKDRL-QWEKEHDCNTKMREWMINNQIATDEELSEIEKDIKRKV 346 >gi|325676394|ref|ZP_08156072.1| 2-oxoglutarate dehydrogenase E1 component [Rhodococcus equi ATCC 33707] gi|325552572|gb|EGD22256.1| 2-oxoglutarate dehydrogenase E1 component [Rhodococcus equi ATCC 33707] Length = 1163 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 12/182 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L ++V+ NNQ T+ + + + Sbjct: 574 MPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTVHVVVNNQVGFTTAPEHSRSSEYCTD 633 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + ++I+++ YR RGH SM+ Sbjct: 634 VAKMIGAPIFHVNGDDPEACVWVAQLAVDFREKFGKDVVIDLICYRRRGHNEGDDPSMTQ 693 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 PA Y + +R ++ E + R + +E L++ + + ++ N E + Sbjct: 694 PAMYDLIDTKRSVRKSY--TEALIGRGDISLKEAEDALRDYQGQLERVFNEVRELEKFKP 751 Query: 352 EP 353 EP Sbjct: 752 EP 753 >gi|325131509|gb|EGC54216.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis M6190] gi|325139237|gb|EGC61783.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis ES14902] Length = 637 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|254447710|ref|ZP_05061176.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [gamma proteobacterium HTCC5015] gi|198263053|gb|EDY87332.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [gamma proteobacterium HTCC5015] Length = 941 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 16/172 (9%) Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA- 191 K GG+ H+ F H + A V G+ A + RR D + + GD A Sbjct: 307 KTDGGTAHL---ALAFNPSHLEIVAPVVEGS--VRARQDRRGDGSGSAVLPINIHGDAAF 361 Query: 192 ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGM 247 A QG V E+FN++ + ++++ NNQ TS + + T + + N P Sbjct: 362 AGQGVVMETFNMSQSRGFSTKGTVHIVINNQIGFTTSNQKDTRSTYYCTDVAKMVNAPIF 421 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PANYRTR 298 V+G + AV A+ Y K ++I+++ YR GH+ +D P+ + R Sbjct: 422 HVNGDNPEAVCFVTQLALEYRTKFKKDVVIDLICYRRHGHNEADEPSATQPR 473 >gi|187935528|ref|YP_001885635.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum B str. Eklund 17B] gi|187723681|gb|ACD24902.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum B str. Eklund 17B] Length = 586 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 46/201 (22%), Positives = 93/201 (46%), Gaps = 36/201 (17%) Query: 129 LTGRQGG-ISKGKGGSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I+ + S+ ++++N F GH +SL G+A A +R+ + Sbjct: 83 LTGRKNAFINPDEYKSVTGYTSQNESEHDFFTVGH--TSTSISLACGLAKARDVKRNTEN 140 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS------------VSRAS 230 + GDG+ + G+ YE N A+ N+I ++ +N ++ + + Sbjct: 141 IIAVIGDGSLSGGEAYEGLNNASASGKNIIILVNDNDMSIAENHGGLYQNLALLRKTNGK 200 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH--S 288 A+ NF K + F+ ++ DG DI ++ T K + P+++ M T + +G+ + Sbjct: 201 AENNFFK-SLGFDYHYVK-DGNDIESLIETFLK----VKDTDHPVVVHMHTVKGKGYEDA 254 Query: 289 MSD--------PANYRTREEI 301 M + P +++T+E + Sbjct: 255 MQNKEAFHWVMPFDFKTKESL 275 >gi|114629335|ref|XP_001135864.1| PREDICTED: probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial [Pan troglodytes] Length = 919 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + +++I NNQ T R + S Sbjct: 326 ICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSVHLIVNNQLGYTTPAERGRSSLYCSD 385 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G V A Y R + +II++L YR GH+ ++ Sbjct: 386 IGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIIDLLCYRQWGHNELDEPFFTN 445 Query: 292 PANY---RTREEINEMRSNH 308 P Y R R+ I + + H Sbjct: 446 PIMYKIIRARKSIPDTYAEH 465 >gi|296220116|ref|XP_002756165.1| PREDICTED: 2-oxoglutarate dehydrogenase-like, mitochondrial isoform 1 [Callithrix jacchus] Length = 1010 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++++ NNQ Sbjct: 377 AEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHIVVNNQIGFT 436 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 437 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 496 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 497 RRGHNEMDEP 506 >gi|261601909|gb|ACX91512.1| Transketolase domain protein [Sulfolobus solfataricus 98/2] Length = 274 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 16/164 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A K V GDG ++G+++E+ A + NL N+I IE Sbjct: 125 GSLGQGLSFGIGVATGIKMANGTGRVYVIMGDGEQDEGEIWEAMTHAVVRNLDNLIAFIE 184 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + S + K + + DG D ++ +++A + P++ Sbjct: 185 MNNFQLDGSTDEIKPKNFLPKVWEAVGWKVLNCDGHDFISITNAVNEAYKASK----PVV 240 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 I T R +G + E ++ RS+ D RK LL+ Sbjct: 241 IFAKTVRGKG--------FPPIENTHKQRSSPD---DARKYLLN 273 >gi|332217150|ref|XP_003257720.1| PREDICTED: probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial-like [Nomascus leucogenys] Length = 927 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + +++I NNQ T R + S Sbjct: 334 ICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSVHLIVNNQLGYTTPAERGRSSLYCSD 393 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G V A Y R + +II++L YR GH+ ++ Sbjct: 394 IGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIIDLLCYRQWGHNELDEPFFTN 453 Query: 292 PANY---RTREEINEMRSNH 308 P Y R R+ I + + H Sbjct: 454 PIMYKIIRARKSIPDTYAEH 473 >gi|325129522|gb|EGC52349.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis OX99.30304] gi|325135645|gb|EGC58262.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis M0579] Length = 637 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|189237141|ref|XP_973425.2| PREDICTED: similar to 2-oxoglutarate dehydrogenase [Tribolium castaneum] Length = 1050 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 37/175 (21%), Positives = 82/175 (46%), Gaps = 8/175 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV--SRASAQTNF 235 + ++ GD A QG V+E+ +++ L + ++++ NNQ T SR+SA Sbjct: 406 MSILLHGDAAFCGQGIVFETMHLSDLPDYTTHGTVHIVVNNQIGFTTDPRHSRSSAYCTD 465 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 R V N P V+ D +V + A + ++I+++ YR GH+ D + Sbjct: 466 VARVV--NAPIFHVNSDDPESVMHVCNMAAEWRATFHKDVVIDIVCYRRNGHNEIDEPMF 523 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 ++++ +E+ ++L+ + ++K+++ KI +++E A+ + Sbjct: 524 TQPLMYRKIKNTKSVLEKYSEQLVKENVVTTEEVKDVKAKYEKICEDALESARKE 578 >gi|197099632|ref|NP_001126339.1| probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial precursor [Pongo abelii] gi|75041411|sp|Q5R7H0|DHTK1_PONAB RecName: Full=Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; AltName: Full=Dehydrogenase E1 and transketolase domain-containing protein 1; Flags: Precursor gi|55731151|emb|CAH92290.1| hypothetical protein [Pongo abelii] Length = 919 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + +++I NNQ T R + S Sbjct: 326 ICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSVHLIVNNQLGYTTPAERGRSSLYCSD 385 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G V A Y R + +II++L YR GH+ ++ Sbjct: 386 IGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIIDLLCYRQWGHNELDEPFFTN 445 Query: 292 PANY---RTREEINEMRSNH 308 P Y R R+ I + + H Sbjct: 446 PIMYKIIRARKSIPDTYAEH 465 >gi|17231544|ref|NP_488092.1| transketolase [Nostoc sp. PCC 7120] gi|17133187|dbj|BAB75751.1| transketolase [Nostoc sp. PCC 7120] Length = 633 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 2/111 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICV-VCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + +G G+ A KY V V GD +G V+E+F+ AA + L N+I +I Sbjct: 118 GSLGQGLPIGVGLGLAGKYLDQLPYNVWVLLGDSETAEGSVWEAFDHAAHYTLDNLIAII 177 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 + N+ ++ R +F +++DG D+ + AV+ Sbjct: 178 DVNRLGQRGQTELGWNTQAYANRAKAFGWQAIEIDGHDLTEIDQAFSAAVS 228 >gi|319955264|ref|YP_004166531.1| transketolase domain-containing protein [Cellulophaga algicola DSM 14237] gi|319423924|gb|ADV51033.1| Transketolase domain-containing protein [Cellulophaga algicola DSM 14237] Length = 803 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 81/337 (24%), Positives = 133/337 (39%), Gaps = 56/337 (16%) Query: 49 KEQELSAYRLMLLIRR--FEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KEQ L+ Y + +L R + L G G F G+E + M S GD Sbjct: 17 KEQILNDYEIAVLSRECSLLGRREVLTGKAKFGIFGD---GKELPQLAMARSFKNGDFRS 73 Query: 107 TAYREHGHILACG-VDASKIMAEL------------TGRQGG-----ISKGKGGSMHMFS 148 YR+ ++A G ++A + L GRQ G S + G+ + Sbjct: 74 GYYRDQTFMMALGHLNAKQFFHALYATTDIKKEPMSAGRQMGGHFVTPSLNEDGTWKDLT 133 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANK-YRRSDKICVVCF------------GDGAANQG 195 + Q+ G+A A+K YR I F G+ + ++G Sbjct: 134 AQTNSSADISPTAGQMPRLLGLAQASKIYRHVKGIDATKFSKNGNEVAWGTIGNASTSEG 193 Query: 196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ------- 248 +E+ N A + + ++ + ++ Y G SV A QT +K +S + G Q Sbjct: 194 HFFETINAAGVLQVPMVISVWDDNY--GISV-HARHQT--TKEDISEILKGFQRTEKDKG 248 Query: 249 -----VDGMDIRAVKATMDKAVAYCRAHKGPIIIEM--LTYRYRGHSMSDPANYRTREEI 301 V+G D A+ + A R P++I + LT + +GHS S EE Sbjct: 249 YEIFKVNGWDYTALIHAYENAADIAREEHVPVLIHVKELT-QPQGHSTSGSHERYKSEER 307 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 E +D ++ R+ +L A++ +LK IE +RK Sbjct: 308 LEWERQNDCNKRFREWILEIGIATDDELKVIEKEIRK 344 >gi|262281278|ref|ZP_06059060.1| 2-oxoglutarate dehydrogenase complex [Acinetobacter calcoaceticus RUH2202] gi|262257509|gb|EEY76245.1| 2-oxoglutarate dehydrogenase complex [Acinetobacter calcoaceticus RUH2202] Length = 946 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 309 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRRDIGGDDVLPVIVHGDAAFAG 362 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V +++I NNQ TS R + T + + P V Sbjct: 363 QGVNMETFQMSQTRGYTVGGTVHIIVNNQVGFTTSDPRDARSTEYCTDVAKMIQTPIFHV 422 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +G D AV A + + +++++ YR RGH+ +D Sbjct: 423 NGDDPEAVIFATQLAHDFRHEFRKDVVLDLFCYRRRGHNEAD 464 >gi|330797713|ref|XP_003286903.1| oxoglutarate dehydrogenase [Dictyostelium purpureum] gi|325083138|gb|EGC36599.1| oxoglutarate dehydrogenase [Dictyostelium purpureum] Length = 894 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 4/176 (2%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S+ +C++ GD A A QG V E+ ++ L + I+V+ NNQ T S Sbjct: 288 SESLCLMLHGDAAVAGQGVVTETLQLSQLPGFTIGGCIHVVVNNQIGFTTIPSNGRTNRY 347 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S G P + V+ V+ AV Y + K I+I+++ +R GH+ D Sbjct: 348 SSDIGKYIGAPIIIVNSQSPEQVEKVSRLAVEYRQRFKKDIVIDLIGWRKFGHNEVDEPA 407 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 + + +R ++ +++ SE +L + + + AQ + Sbjct: 408 FTQPTMYDNIRRRQSIPQRYATKIISEGIYSEAELASFTQAEKDALEAQFQLAQPE 463 >gi|299768989|ref|YP_003731015.1| 2-oxoglutarate dehydrogenase E1 component [Acinetobacter sp. DR1] gi|298699077|gb|ADI89642.1| 2-oxoglutarate dehydrogenase E1 component [Acinetobacter sp. DR1] Length = 946 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 309 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRRDIGGDDVLPVIVHGDAAFAG 362 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V +++I NNQ TS R + T + + P V Sbjct: 363 QGVNMETFQMSQTRGYTVGGTVHIIVNNQVGFTTSDPRDARSTEYCTDVAKMIQTPIFHV 422 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +G D AV A + + +++++ YR RGH+ +D Sbjct: 423 NGDDPEAVIFATQLAHDFRHEFRKDVVLDLFCYRRRGHNEAD 464 >gi|15897243|ref|NP_341848.1| transketolase, N-terminal section (tkt-1) [Sulfolobus solfataricus P2] gi|284174489|ref|ZP_06388458.1| transketolase, N-terminal section (tkt-1) [Sulfolobus solfataricus 98/2] gi|13813444|gb|AAK40638.1| Transketolase, N-terminal section (tkt-1) [Sulfolobus solfataricus P2] Length = 281 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 16/164 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A K V GDG ++G+++E+ A + NL N+I IE Sbjct: 132 GSLGQGLSFGIGVATGIKMANGTGRVYVIMGDGEQDEGEIWEAMTHAVVRNLDNLIAFIE 191 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + S + K + + DG D ++ +++A + P++ Sbjct: 192 MNNFQLDGSTDEIKPKNFLPKVWEAVGWKVLNCDGHDFISITNAVNEAYKASK----PVV 247 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 I T R +G + E ++ RS+ D RK LL+ Sbjct: 248 IFAKTVRGKG--------FPPIENTHKQRSSPD---DARKYLLN 280 >gi|255262627|ref|ZP_05341969.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Thalassiobium sp. R2A62] gi|255104962|gb|EET47636.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Thalassiobium sp. R2A62] Length = 989 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 37/184 (20%), Positives = 82/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E F ++ L ++++ NNQ T+ + + Sbjct: 384 RTKVLPILLHGDAAFAGQGVVAEGFGLSGLRGHKTGGTMHIVVNNQIGFTTAPHFSRSSP 443 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+G D AV A + + ++I+++ YR GH+ D Sbjct: 444 YPTDIALMVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDIICYRRFGHNEGDEP 503 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +++ + +RL+ + EG++++++ + + +N E ++ K P Sbjct: 504 MFTNPLMYKKIKKQKTSLTLYTERLVRDGLIPEGEIEDMKASFQAHLNEEFEAGKTYK-P 562 Query: 354 DPAE 357 + A+ Sbjct: 563 NKAD 566 >gi|325133511|gb|EGC56174.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis M13399] Length = 637 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAALGMAAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|92113343|ref|YP_573271.1| alpha-ketoglutarate decarboxylase [Chromohalobacter salexigens DSM 3043] gi|91796433|gb|ABE58572.1| 2-oxoglutarate dehydrogenase E1 component [Chromohalobacter salexigens DSM 3043] Length = 943 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR D + VV GD A A QG V E+F ++ ++++ NNQ Sbjct: 336 GSVRARQDRRDDSEGAKVLPVVVHGDAAFAGQGVVMETFQMSQTRGYKTGGTVHIVINNQ 395 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS + T + + P V+G D AV AV Y ++I+ Sbjct: 396 VGFTTSRPDDARSTEYCTDIAKMVQAPIFHVNGDDPEAVIHATQVAVDYRYQFNKDVVID 455 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 456 LVCYRKRGHNEAD 468 >gi|325141562|gb|EGC64028.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis 961-5945] gi|325197635|gb|ADY93091.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis G2136] Length = 637 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|284176104|ref|ZP_06390073.1| pyruvate dehydrogenase alpha subunit (lipoamide) [Sulfolobus solfataricus 98/2] Length = 52 Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 22/46 (47%), Positives = 29/46 (63%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG 94 K + L Y+ MLLIR E A +L+ G + GF HL +G+EAV VG Sbjct: 7 KSKLLDMYKKMLLIRYHELTAKELFASGKIPGFVHLYVGEEAVAVG 52 >gi|18149149|dbj|BAB83599.1| 2-oxoglutarate dehydrogenase [Pseudomonas putida] Length = 916 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 10/136 (7%) Query: 169 GIAFANKYRRSDKI-----CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ ++++ NNQ Sbjct: 311 GSVRARQDRRNDTVGDKVVPISIHGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQ 370 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S + T ++ P + V+G D AV A+ Y K ++I+ Sbjct: 371 VGFTISNPLDARSTEYATDVAKMIQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVID 430 Query: 279 MLTYRYRGHSMSDPAN 294 ++ YR RGH+ +D N Sbjct: 431 LVCYRRRGHNEADEPN 446 >gi|86134360|ref|ZP_01052942.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaribacter sp. MED152] gi|85821223|gb|EAQ42370.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaribacter sp. MED152] Length = 588 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 20/152 (13%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +LG IA +N ++K + GD + G +E+ N A + Sbjct: 107 SNFDTFGVGHSSTSISAALGMAIA-SNLKGETNKHHIAVIGDASIASGMAFEALNHAGVS 165 Query: 208 NLNVIYVIENNQYAMGTSV-------------SRASAQTNFSKRGVSFNIPGMQVDGMDI 254 N++ ++ +N + SV + +AQ N K ++F+ G VDG DI Sbjct: 166 KANILIILNDNAIGIDPSVGALKEYLTRVKTDKKLAAQNNIIK-ALNFDYSG-PVDGHDI 223 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + A +D+ + KGP + ++T + +G Sbjct: 224 PKLLAELDR----LKQVKGPKFLHVITTKGKG 251 >gi|301089181|ref|XP_002894923.1| 2-oxoglutarate dehydrogenase E1 component, putative [Phytophthora infestans T30-4] gi|262105089|gb|EEY63141.1| 2-oxoglutarate dehydrogenase E1 component, putative [Phytophthora infestans T30-4] Length = 774 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 4/121 (3%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 ++ + ++ GD A A QG V E+ ++ L + ++++ NNQ T+ A Sbjct: 141 TNAMALLLHGDAAFAGQGCVPEALALSQLPDFQTGGSVHIVVNNQVGYTTTYPDGRATRY 200 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S S P + V+G I V AVAY I+I+++T+R GH+ D Sbjct: 201 ASDIAKSIEAPILHVNGESIADVIRACRLAVAYRNQFHKDIVIDLITFRRHGHNEVDEPR 260 Query: 295 Y 295 + Sbjct: 261 F 261 >gi|312138899|ref|YP_004006235.1| 2-oxoglutarate dehydrogenase suca [Rhodococcus equi 103S] gi|311888238|emb|CBH47550.1| 2-oxoglutarate dehydrogenase SucA [Rhodococcus equi 103S] Length = 1256 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 12/182 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L ++V+ NNQ T+ + + + Sbjct: 667 MPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTVHVVVNNQVGFTTAPEHSRSSEYCTD 726 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + ++I+++ YR RGH SM+ Sbjct: 727 VAKMIGAPIFHVNGDDPEACVWVAQLAVDFREKFGKDVVIDLICYRRRGHNEGDDPSMTQ 786 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 PA Y + +R ++ E + R + +E L++ + + ++ N E + Sbjct: 787 PAMYDLIDTKRSVRKSY--TEALIGRGDISLKEAEDALRDYQGQLERVFNEVRELEKFKP 844 Query: 352 EP 353 EP Sbjct: 845 EP 846 >gi|291518370|emb|CBK73591.1| Transketolase, N-terminal subunit [Butyrivibrio fibrisolvens 16/4] Length = 274 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G +S+ TG+A + K GDG +GQV+E+ AA L N Sbjct: 109 GIDASSGSLGQGISVATGMALSAKLSNESYRVYTLLGDGEIQEGQVWEAAMFAAAKKLDN 168 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCR 269 + +++NN + + ++ + +FN ++V DG D ++A +A R Sbjct: 169 LCVIVDNNGLQIDGRIEDVNSPYPIPDKFRAFNFHVVEVADGNDFDQLRAAFKEA----R 224 Query: 270 AHKG-PIIIEMLTYRYRGHSM 289 KG P I M T + +G S Sbjct: 225 ETKGQPTAIVMKTVKGKGISF 245 >gi|77163649|ref|YP_342174.1| alpha-ketoglutarate decarboxylase [Nitrosococcus oceani ATCC 19707] gi|254435368|ref|ZP_05048875.1| 2-oxoglutarate dehydrogenase, E1 component [Nitrosococcus oceani AFC27] gi|76881963|gb|ABA56644.1| 2-oxoglutarate dehydrogenase E1 component [Nitrosococcus oceani ATCC 19707] gi|207088479|gb|EDZ65751.1| 2-oxoglutarate dehydrogenase, E1 component [Nitrosococcus oceani AFC27] Length = 940 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 10/129 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMG 223 A + RR D I V+ GD A A QG V E+FN++ + ++++ NNQ Sbjct: 338 ARQQRRKDWLGDEVIPVLIHGDSAFAGQGVVMETFNMSQSRGFFTGGTLHIVINNQIGFT 397 Query: 224 TSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 TS + T + + P V+G D AV A+ Y K ++I+++ Y Sbjct: 398 TSNPLDTRSTVYCTDVAKMVQAPIFHVNGDDPEAVIFVTRLALDYRMTFKKDVVIDLVCY 457 Query: 283 RYRGHSMSD 291 R +GH+ +D Sbjct: 458 RRQGHNEAD 466 >gi|309812231|ref|ZP_07705989.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Dermacoccus sp. Ellin185] gi|308433918|gb|EFP57792.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Dermacoccus sp. Ellin185] Length = 1278 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 10/134 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N++ L I+V+ NNQ T+ S + + T + Sbjct: 670 LPILLHGDAAFAGQGIVAETLNLSQLRGYRTGGTIHVVINNQVGFTTAPSSSRSSTYSTD 729 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A + A Y + ++I+M+ YR RGH SM+ Sbjct: 730 VARMVQAPIFHVNGDDPEACVRVAELAFEYRQTFNKDVVIDMVCYRRRGHNEGDDPSMTQ 789 Query: 292 PANYRTREEINEMR 305 P Y+ E +R Sbjct: 790 PLMYKLIEAKKSVR 803 >gi|255531413|ref|YP_003091785.1| transketolase [Pedobacter heparinus DSM 2366] gi|255344397|gb|ACU03723.1| Transketolase domain protein [Pedobacter heparinus DSM 2366] Length = 807 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 62/281 (22%), Positives = 113/281 (40%), Gaps = 52/281 (18%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASK-IMAEL------------TGRQ 133 G+E + M + GD YR+ A G+ K A+L GRQ Sbjct: 60 GKELPQIAMAKAFKNGDWRSGYYRDQTFAFAAGICTIKEFFAQLYANPSVEADPASAGRQ 119 Query: 134 -----GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK-YRRS-------- 179 S + GS + G Q++ G+A+A+K YR++ Sbjct: 120 MNCHFATRSLNEDGSWKDLTDIKNSSSDIAPTGGQMARLVGLAYASKLYRQNPELEYLKN 179 Query: 180 -----DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 +++ G+ + ++G +E+ N A + + + + ++ Y G SV A+ Sbjct: 180 FSVNGNEVAFGTIGNASTSEGVFFEAINAAGVLQIPMAMSVWDDAY--GISVP---AKYQ 234 Query: 235 FSKRGVSFNIPGMQVD------------GMDIRAVKATMDKAVAYCRAHKGPIIIEML-T 281 +K +S + G Q D G D A+ T +A+ CR+ P++I + Sbjct: 235 TTKEDISEILKGFQRDEKVEGYEIYKVRGWDYPALCETYQRAIDVCRSEHVPVLIHVTEV 294 Query: 282 YRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHN 321 + +GHS S Y+ ++ + E +D I Q+RK +L + Sbjct: 295 TQPQGHSTSGSHERYKDKDRL-EWEKEYDCILQMRKWMLES 334 >gi|126272867|ref|XP_001366138.1| PREDICTED: similar to oxoglutarate dehydrogenase-like, [Monodelphis domestica] Length = 1016 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + ++++ NNQ Sbjct: 384 AEQFYRGDTEGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTVHIVVNNQIGFT 443 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 444 TDPRMARSSHYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYR 503 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 504 RRGHNEMDEP 513 >gi|71279902|ref|YP_268944.1| 2-oxoglutarate dehydrogenase E1 component [Colwellia psychrerythraea 34H] gi|71145642|gb|AAZ26115.1| 2-oxoglutarate dehydrogenase, E1 component [Colwellia psychrerythraea 34H] Length = 934 Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust. Identities = 60/252 (23%), Positives = 109/252 (43%), Gaps = 38/252 (15%) Query: 119 GVDASKIMAELTGRQGGI-SKG--------------KGGSMHMFSTKNGFYGGHGIVGAQ 163 G + SK+ E G+ I S G GG++H+ F H + Sbjct: 273 GKNPSKLFDEFAGKHDEILSSGDVKYHQGYSSDFVTPGGTVHL---ALAFNPSHLEIVNP 329 Query: 164 VSLGTGIAFANKYRRSDK----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVI 215 V +G+ A ++ R D+ + + GD A A QG V E+FN++ V + ++ Sbjct: 330 VVIGSVRARLDR-RDCDQGDLVLPITIHGDSAIAGQGVVQETFNMSQARAFKVGGTVRIV 388 Query: 216 ENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 NNQ TSV+ + + ++ P + V+G D AV A+ Y K Sbjct: 389 VNNQVGFTTSVAEDTRSGEYCTEIAKMVQAPIIHVNGDDPEAVILATQIALDYRNEFKRD 448 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL----- 329 ++I+++ YR GH+ +D + T+ + ++ H ++L +K ++EG L Sbjct: 449 VVIDLVCYRRHGHNEADEPS-ATQPLMYKIVKKH----PTPRQLYADKLSAEGSLTTAKI 503 Query: 330 KEIEMNVRKIIN 341 E+ RK+++ Sbjct: 504 DELTAYYRKLLD 515 >gi|319406380|emb|CBI80021.1| alpha-ketoglutarate dehydrogenase [Bartonella sp. AR 15-3] Length = 971 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 12/174 (6%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A + QG + E F ++ L V I+VI NNQ T + + Sbjct: 368 RSKVLPLLIHGDAAFSGQGVIQEMFGLSDLRGYRVAGSIHVIINNQIGFTTDPRFSRSSP 427 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV A + + P++I++ YR GH+ D Sbjct: 428 YPSDVAKMIDAPIFHVNGDDPEAVVFVAKVATEFRQIFHKPVVIDIFCYRRYGHNEGDEP 487 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG--DLKEIEMNVRKIINNSVE 345 ++ T+ + + NH Q L ++ +EG D +E+E +K+ + +E Sbjct: 488 SF-TQPLMYKAIRNHKTTVQ----LYSSQLIAEGVIDSQEVEQK-KKVWRDKLE 535 >gi|221053484|ref|XP_002258116.1| 2-oxoglutarate dehydrogenase e1 component,mitochondrial [Plasmodium knowlesi strain H] gi|193807949|emb|CAQ38653.1| 2-oxoglutarate dehydrogenase e1 component,mitochondrial, putative [Plasmodium knowlesi strain H] Length = 1044 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 101/250 (40%), Gaps = 24/250 (9%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT------GIAFANKYRRSDK- 181 + G G + G + F ++ Y GIV L + G A A +Y +DK Sbjct: 348 IWGNTGDVKYHLGVEIDHFDEESNRYIHMGIVDNSSHLESVDPILMGQARAQQYYCNDKE 407 Query: 182 ----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 + + GD + A QG YE+ ++ L + V I+++ NNQ T A + Sbjct: 408 KEKVLPITIHGDASIAGQGIAYETLQMSKLPSYTVGGTIHIVVNNQIGFTTYPVDARSGK 467 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + +IP + V+ D AV + A+ II+++ YR GH+ D Sbjct: 468 YCTDIAKCIDIPIIHVNADDPEAVTYVFELALDIRNRFHIDTIIDIVGYRRFGHNELDMP 527 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG--DLKEIEMNVRKIINNSVEFAQSDK 351 + T + ++ + H+ + L K EG L+E E N I N E ++ K Sbjct: 528 KF-TNPLLYDIITRHESVLD----LYSKKLIREGVISLEEFEKNKTDIYNLYEEVYENSK 582 Query: 352 E--PDPAELY 359 P P E Y Sbjct: 583 SFVPTPKEKY 592 >gi|110834357|ref|YP_693216.1| 2-oxoglutarate dehydrogenase E1 component [Alcanivorax borkumensis SK2] gi|110647468|emb|CAL16944.1| oxoglutarate dehydrogenase (succinyl-transferring) [Alcanivorax borkumensis SK2] Length = 944 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 16/227 (7%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG +H+ F H + A V G+ A + RR D+ + ++ GD A A Q Sbjct: 316 GGEVHL---AMAFNPSHLEIVAPVVEGS--VRARQDRREDEGGEQVVPILLHGDAAFAGQ 370 Query: 195 GQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVD 250 G V E+F ++ + ++VI NNQ TS + T + + P V+ Sbjct: 371 GVVMETFQMSQTRGFHTGGTLHVIINNQVGFTTSRRDDARSTEYCTDVAKMVQAPIFHVN 430 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDP 310 D AV AV Y K ++I++ YR GH+ +D + +++S+ Sbjct: 431 ADDPEAVYFVTQLAVDYRMQFKKDVVIDLFCYRRSGHNEADEPSSTQPMMYKKIKSHPTT 490 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS-DKEPDPA 356 ++L++ K SE + ++ + R +++ +S +EP+ A Sbjct: 491 RTLYAEKLINEKVISEQEAQKTVDDYRDMLDAGNHVVKSLVREPNKA 537 >gi|152984422|ref|YP_001349043.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas aeruginosa PA7] gi|150959580|gb|ABR81605.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Pseudomonas aeruginosa PA7] Length = 938 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 6/118 (5%) Query: 180 DKICVVCF-GDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 DK+ + GD A A QG V E+F ++ A I+++ NNQ TS + T Sbjct: 348 DKVVPISIHGDAAFAGQGVVMETFQMSQTRAYKTGGTIHLVINNQVGFTTSRQDDARSTE 407 Query: 235 FSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 ++ P V+G D AV AV Y K ++I+++ YR RGH+ +D Sbjct: 408 YATDVAKMIQAPIFHVNGDDPEAVLFVTQLAVDYRMQFKRDVVIDLVCYRRRGHNEAD 465 >gi|126725082|ref|ZP_01740925.1| alpha-ketoglutarate decarboxylase [Rhodobacterales bacterium HTCC2150] gi|126706246|gb|EBA05336.1| alpha-ketoglutarate decarboxylase [Rhodobacterales bacterium HTCC2150] Length = 986 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 82/188 (43%), Gaps = 5/188 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R+ + ++ GD A A QG V E F ++ L ++++ NNQ T+ + Sbjct: 377 NDVDRTKVLPILLHGDAAFAGQGVVAECFGLSGLIGHKTGGTMHIVVNNQIGFTTAPHFS 436 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D AV A + + ++I+++ YR GH+ Sbjct: 437 RSSPYPTDIALMVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDIICYRRFGHNE 496 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + ++ + + +RL+ + EG++++++ + +N E ++ Sbjct: 497 GDEPMFTNPIMYKTIKKHKTTLTLYTERLVKDGLIPEGEIEDMKAAFQAHLNEEFEVGRT 556 Query: 350 DKEPDPAE 357 K P+ A+ Sbjct: 557 YK-PNKAD 563 >gi|319409817|emb|CBY90125.1| 1-deoxy-D-xylulose-5-phosphate synthase (1-deoxyxylulose-5-phosphate synthase; DXP synthase; DXPS) [Neisseria meningitidis WUE 2594] Length = 637 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKQLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|308446904|ref|XP_003087287.1| hypothetical protein CRE_26040 [Caenorhabditis remanei] gi|308257950|gb|EFP01903.1| hypothetical protein CRE_26040 [Caenorhabditis remanei] Length = 482 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 16/202 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + TG+A+ KY V C GDG + +G V+E+ A+++ L N++ ++ Sbjct: 76 GSLGQGLGVATGMAYVGKYIDKASYRVFCLLGDGESAEGSVWEAAAFASIYKLDNLVAIV 135 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 + N+ + S + R +F + VDG ++ + A + A R KG P Sbjct: 136 DVNRLGQSQATSLGHDVETYKARFAAFGFNAIIVDGHNVEELLAAYETA----RNTKGKP 191 Query: 275 IIIEMLTYRYRG-HSMSDPANYRTR----EEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 + T + +G + + N+ + E IN +++ + + +L+ K + D Sbjct: 192 TALIAKTLKGKGIEGIENEDNWHGKPVPAETINAIKARFHGSQ--KGKLVAQKPIN--DA 247 Query: 330 KEIEMNVRKIINNSVEFAQSDK 351 I+++V I + E+ + DK Sbjct: 248 PAIDLHVGSIKMPAPEYKKGDK 269 >gi|167034755|ref|YP_001669986.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas putida GB-1] gi|166861243|gb|ABY99650.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pseudomonas putida GB-1] Length = 943 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 10/136 (7%) Query: 169 GIAFANKYRRSDKI-----CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ ++++ NNQ Sbjct: 338 GSVRARQDRRNDTVGDKVLPISIHGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S + T ++ P + V+G D AV A+ Y K ++I+ Sbjct: 398 VGFTISNPLDARSTEYATDVAKMIQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVID 457 Query: 279 MLTYRYRGHSMSDPAN 294 ++ YR RGH+ +D N Sbjct: 458 LVCYRRRGHNEADEPN 473 >gi|89053322|ref|YP_508773.1| 2-oxoglutarate dehydrogenase E1 component [Jannaschia sp. CCS1] gi|88862871|gb|ABD53748.1| 2-oxoglutarate dehydrogenase E1 component [Jannaschia sp. CCS1] Length = 985 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 82/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + V+ GD A A QG V E F ++ L I+++ NNQ T+ + + Sbjct: 382 RTKVMGVLLHGDAAFAGQGVVAEGFGLSGLRGHRTGGTIHIVVNNQIGFTTAPHFSRSSP 441 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+G D AV A + + +++++ YR GH+ D Sbjct: 442 YPTDIALMVEAPIFHVNGDDPEAVVHAARVATEFRQKFHKDVVLDIFCYRRFGHNEGDEP 501 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + ++++ + +RL+ + EG++++++ + + ++ E A D +P Sbjct: 502 MFTNPIMYKKIKTQKTTLAIYTERLVKDGLIPEGEIEDMKASFQAYLSEEFE-AGKDYKP 560 Query: 354 DPAE 357 + A+ Sbjct: 561 NKAD 564 >gi|116204753|ref|XP_001228187.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88176388|gb|EAQ83856.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 1041 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 21/201 (10%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG VYE +L + I+++ NNQ T + + + Sbjct: 417 MAVLLHGDAAFAAQGVVYECLGFHSLPAFSTGGTIHLVVNNQIGFTTDPRYSRSTPYCTD 476 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + + P V+ D+ AV A + K +II+M+ YR GH+ +D ++ Sbjct: 477 IAKAIDAPVFHVNADDVEAVNFVCQLAADWRAEFKQDVIIDMVCYRKHGHNETDQPSFTQ 536 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS-DKEP--- 353 ++ + ++ +LL ++ D++E + V ++ S F++S D +P Sbjct: 537 PLMYKRIQEKNPQLQIYVDKLLKEGTFTKEDVEEHKQWVWGMLEES--FSKSKDYQPTSK 594 Query: 354 -----------DPAELYSDIL 363 P EL S++L Sbjct: 595 EWTTSAWNGFKSPKELASEVL 615 >gi|330975835|gb|EGH75901.1| transketolase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 256 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 87/219 (39%), Gaps = 17/219 (7%) Query: 70 GQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIM 126 GQ+ G G VG G L + + E +Q Y GH A + A+ I Sbjct: 2 GQVQGQGYVGQALGAADLLAVSYFHALNYRPEDPEWEQRDRFYLSIGH-YAIALYAALIE 60 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FANKYRRSDKI 182 AE+ + G S S + G I G + G GIA K + S Sbjct: 61 AEIIPFDELETYGSDDSRLPMSGMATYTPGMEITGGSLGHGLGIAVGACLGLKRKNSSAF 120 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGV 240 DG N+G +E+ A+ W L N+I +I+ NNQ A G S S A R Sbjct: 121 VYNLLSDGELNEGSTWEAAMSASHWKLDNLIAIIDVNNQQADGHS-SEVLAFEPIVDRWQ 179 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--PIII 277 +F +VDG D+ A+ A D A R H G P +I Sbjct: 180 AFGWFTQRVDGNDLDALVAAFDNA----RQHAGTQPRVI 214 >gi|218767553|ref|YP_002342065.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis Z2491] gi|13124127|sp|Q9JW13|DXS_NEIMA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|121051561|emb|CAM07859.1| putative 1-deoxyxylulose-5-phosphate synthase [Neisseria meningitidis Z2491] Length = 637 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKQLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|332992988|gb|AEF03043.1| 2-oxoglutarate dehydrogenase E1 component [Alteromonas sp. SN2] Length = 939 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 9/127 (7%) Query: 177 RRSDK----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSR 228 RR+D + + GD A A QG V E+FN++ V + ++ NNQ TS + Sbjct: 347 RRNDDTNTVLPITIHGDSAIAGQGVVQETFNMSQTRGFAVGGTVRIVVNNQVGFTTSKTE 406 Query: 229 ASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + T + + P V+ D AV A+ Y K ++I+++ YR GH Sbjct: 407 DTRSTQYCTDIAKMVQAPIFHVNSDDPEAVAFVTQLALEYRNKFKRDVVIDLVCYRRHGH 466 Query: 288 SMSDPAN 294 + +D N Sbjct: 467 NEADEPN 473 >gi|301122827|ref|XP_002909140.1| 2-oxoglutarate dehydrogenase E1 component, putative [Phytophthora infestans T30-4] gi|262099902|gb|EEY57954.1| 2-oxoglutarate dehydrogenase E1 component, putative [Phytophthora infestans T30-4] Length = 924 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 4/121 (3%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 ++ + ++ GD A A QG V E+ ++ L + ++++ NNQ T+ A Sbjct: 291 TNAMALLLHGDAAFAGQGCVPEALALSQLPDFQTGGSVHIVVNNQVGYTTTYPDGRATRY 350 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 S S P + V+G I V AVAY I+I+++T+R GH+ D Sbjct: 351 ASDIAKSIEAPILHVNGESIADVIRACRLAVAYRNQFHKDIVIDLITFRRHGHNEVDEPR 410 Query: 295 Y 295 + Sbjct: 411 F 411 >gi|89889493|ref|ZP_01201004.1| 2-oxoglutarate dehydrogenase, dehydrogenase (E1) component [Flavobacteria bacterium BBFL7] gi|89517766|gb|EAS20422.1| 2-oxoglutarate dehydrogenase, dehydrogenase (E1) component [Flavobacteria bacterium BBFL7] Length = 915 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 10/148 (6%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAAL---WNLNVIYVIENNQYAMGTSVSRASAQT- 233 S + +V GD A A QG VYE +A L I+++ NNQ T+ A + T Sbjct: 330 SKVLPIVLHGDAAIAGQGIVYEVVQMAQLDAYKTAGTIHMVVNNQVGFTTNYLDARSSTY 389 Query: 234 --NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + +K +S P + V+ D AV M+ A+ Y + I++L YR GH+ D Sbjct: 390 CTDIAKVTLS---PVLHVNADDAEAVVHAMNFALDYRMEFGRDVFIDLLGYRKYGHNEGD 446 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLL 319 + + ++ + +P + RLL Sbjct: 447 EPMFTQPQLYKAIKKHENPRDIYADRLL 474 >gi|314967582|gb|EFT11681.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Propionibacterium acnes HL037PA1] Length = 1236 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+ ++ L I+VI NNQ TS + T + Sbjct: 652 LPILMHGDAAFAGQGVVYETLQMSQLGGYRTGGTIHVIVNNQVGFTTSPRDGRSSTYCTD 711 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D +V A Y + ++++++ YR RGH+ D ++ Sbjct: 712 VAKAVGAPVLHVNGDDPASVVHAARIAYEYRFSFHRDVVVDVVCYRRRGHNEGDDPSF 769 >gi|167538236|ref|XP_001750783.1| hypothetical protein [Monosiga brevicollis MX1] gi|163770700|gb|EDQ84382.1| predicted protein [Monosiga brevicollis MX1] Length = 1294 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 9/157 (5%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESF---NIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 +R + ++ GD A A QG VYE F + A I+V+ NNQ T A + Sbjct: 678 KRKRVVPILLHGDAAFAGQGVVYECFGFTQLPAYTTGGTIHVVVNNQIGFTTDPRFARST 737 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + P V+G D AV A+ + + ++++++ YR GH+ +D Sbjct: 738 PYSTDLAKMVGAPIFHVNGDDPEAVARVCQVAMEWRQEFGNDVVVDIVCYRRFGHNEADQ 797 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 + T+ + E + P++Q+ + K A+EG + Sbjct: 798 PAF-TQPLMYERIAEQKPVDQIYE----EKVAAEGTI 829 >gi|99078487|ref|YP_611745.1| 2-oxoglutarate dehydrogenase E1 component [Ruegeria sp. TM1040] gi|99035625|gb|ABF62483.1| 2-oxoglutarate dehydrogenase E1 component [Ruegeria sp. TM1040] Length = 983 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 37/184 (20%), Positives = 81/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E F ++ L ++++ NNQ T+ + + Sbjct: 383 RTAVLPILLHGDAAFAGQGVVAECFALSGLRGHRTGGTMHIVVNNQIGFTTAPHFSRSSP 442 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+G D AV A + + ++I++ YR GH+ D Sbjct: 443 YPTDNALVVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDIFCYRRFGHNEGDEP 502 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +++ + + +RL+ + EG++++++ + +N E ++ K P Sbjct: 503 MFTNPLMYKKIKGHKTTLSLYTERLVKDGLIPEGEIEDMKAAFQAHLNEEFEIGKTYK-P 561 Query: 354 DPAE 357 + A+ Sbjct: 562 NKAD 565 >gi|307353533|ref|YP_003894584.1| transketolase domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307156766|gb|ADN36146.1| Transketolase domain protein [Methanoplanus petrolearius DSM 11571] Length = 277 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 1/111 (0%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 GF +G +G + + GIA A K +R+ + V GDG +G V+E+ A L N Sbjct: 116 GFETINGSLGHGLGVACGIALALKKKRASENVFVLVGDGELYEGSVWEAIMFAGEHKLDN 175 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 +I +++ N+ +M + + + SF VDG DI V ++ Sbjct: 176 LILILDKNRISMLDYCDKIMDLEPYGTKFESFKWEVKTVDGHDINHVYNSL 226 >gi|167040553|ref|YP_001663538.1| transketolase domain-containing protein [Thermoanaerobacter sp. X514] gi|300914596|ref|ZP_07131912.1| Transketolase [Thermoanaerobacter sp. X561] gi|307724170|ref|YP_003903921.1| transketolase [Thermoanaerobacter sp. X513] gi|166854793|gb|ABY93202.1| Transketolase domain protein [Thermoanaerobacter sp. X514] gi|300889531|gb|EFK84677.1| Transketolase [Thermoanaerobacter sp. X561] gi|307581231|gb|ADN54630.1| Transketolase [Thermoanaerobacter sp. X513] Length = 281 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 2/126 (1%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G ++LG G+A A + + + V GDG +G +E+ AA + L N Sbjct: 114 GVEANTGSLGHGIALGVGMALAARMDKKEYRVFVITGDGELQEGSNWEAAMTAAYYGLDN 173 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +I +++ N +G + +++ SF +DG DI + +K + + + Sbjct: 174 LIVIVDRNMLQLGDFTENITRLEPLAEKWKSFGWGVEIIDGHDIEKLLTAFNK-IPFVKG 232 Query: 271 HKGPII 276 II Sbjct: 233 QPSVII 238 >gi|148546903|ref|YP_001267005.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas putida F1] gi|148510961|gb|ABQ77821.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas putida F1] Length = 943 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 10/136 (7%) Query: 169 GIAFANKYRRSDKI-----CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ ++++ NNQ Sbjct: 338 GSVRARQDRRNDTVGDKVLPISIHGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S + T ++ P + V+G D AV A+ Y K ++I+ Sbjct: 398 VGFTISNPLDARSTEYATDVAKMIQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVID 457 Query: 279 MLTYRYRGHSMSDPAN 294 ++ YR RGH+ +D N Sbjct: 458 LVCYRRRGHNEADEPN 473 >gi|315636488|ref|ZP_07891726.1| 1-deoxy-D-xylulose-5-phosphate synthase [Arcobacter butzleri JV22] gi|315479221|gb|EFU69916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Arcobacter butzleri JV22] Length = 601 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 130 TGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFG 188 T RQ GG+S G + S + F GH +SL G A + K ++ +K+ +V G Sbjct: 80 TIRQFGGLS---GFTKPKESPADYFVAGHS--STSISLAVGAAKSIKLKKENKVPIVMIG 134 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 DG+ + G VYE+ N L V+ ++ +N+ ++ + S Sbjct: 135 DGSMSAGMVYEALNELGDLKLPVVIILNDNEMSIAKPIGAIS 176 >gi|254428530|ref|ZP_05042237.1| 2-oxoglutarate dehydrogenase, E1 component [Alcanivorax sp. DG881] gi|196194699|gb|EDX89658.1| 2-oxoglutarate dehydrogenase, E1 component [Alcanivorax sp. DG881] Length = 939 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 11/199 (5%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR D+ + ++ GD A A QG V E+F ++ + ++VI NNQ Sbjct: 334 GSVRARQDRRDDEGGEQVVPIILHGDAAFAGQGVVMETFQMSQTRGFHTGGTLHVIINNQ 393 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS + T + + P V+ D AV AV Y K ++I+ Sbjct: 394 VGFTTSRRDDARSTEYCTDVAKMVQAPIFHVNADDPEAVYFVTQLAVDYRMQFKKDVVID 453 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 ++ YR GH+ +D + +++S+ ++L++ K SE + ++ + R Sbjct: 454 LICYRRSGHNEADEPSSTQPMMYKKIKSHPTTRTLYAEQLINEKVISEQEAQKTVDDYRD 513 Query: 339 IINNSVEFAQS-DKEPDPA 356 +++ +S +EP+ A Sbjct: 514 MLDAGNHVVKSLVREPNKA 532 >gi|325295688|ref|YP_004282202.1| transketolase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066136|gb|ADY74143.1| Transketolase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 287 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 6/110 (5%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 GHGI GA V G+A K + D GDG A +G V+E+ A+ +NL N+ + Sbjct: 133 GHGI-GAAV----GMALGLKLSKLDSKVYCMIGDGEAQEGSVWEATMAASHYNLDNLCVI 187 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ++NN + V + ++ +F ++++G D +K +D+A Sbjct: 188 LDNNNLQIDGPVDEVMSIYPAMEKWKAFGWHVIEINGHDFEEIKRALDEA 237 >gi|26990881|ref|NP_746306.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas putida KT2440] gi|24985894|gb|AAN69770.1|AE016613_5 2-oxoglutarate dehydrogenase, E1 component [Pseudomonas putida KT2440] gi|313497965|gb|ADR59331.1| SucA [Pseudomonas putida BIRD-1] Length = 943 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 10/136 (7%) Query: 169 GIAFANKYRRSDKI-----CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ ++++ NNQ Sbjct: 338 GSVRARQDRRNDTVGDKVVPISIHGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S + T ++ P + V+G D AV A+ Y K ++I+ Sbjct: 398 VGFTISNPLDARSTEYATDVAKMIQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVID 457 Query: 279 MLTYRYRGHSMSDPAN 294 ++ YR RGH+ +D N Sbjct: 458 LVCYRRRGHNEADEPN 473 >gi|326391218|ref|ZP_08212761.1| Transketolase [Thermoanaerobacter ethanolicus JW 200] gi|325992722|gb|EGD51171.1| Transketolase [Thermoanaerobacter ethanolicus JW 200] Length = 281 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 2/126 (1%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G ++LG G+A A + + + V GDG +G +E+ AA + L N Sbjct: 114 GVEANTGSLGHGIALGVGMALAARMDKKEYRVFVITGDGELQEGSNWEAAMTAAYYGLDN 173 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +I +++ N +G + +++ SF +DG DI + +K + + + Sbjct: 174 LIVIVDRNMLQLGDFTENITRLEPLAEKWKSFGWGVEIIDGHDIEKLLTAFNK-IPFVKG 232 Query: 271 HKGPII 276 II Sbjct: 233 QPSVII 238 >gi|251792848|ref|YP_003007574.1| transketolase, N- subunit [Aggregatibacter aphrophilus NJ8700] gi|247534241|gb|ACS97487.1| transketolase, N- subunit [Aggregatibacter aphrophilus NJ8700] Length = 274 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 5/103 (4%) Query: 158 GIVGAQVSLGTGIAFANKYR-RSDK-ICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G +S+ GIA +++ R +S++ C+V GDG N+GQ +E+F A NL N+ + Sbjct: 115 GSLGQGISIAAGIALSHQLRGKSNRTFCIV--GDGELNEGQCWEAFQFIAHRNLTNLCVI 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 ++ N+ + ++ + ++ +F V G DI+A+ Sbjct: 173 VDYNKLQLDGCLTDIINPFSLQEKFAAFGFAVETVKGDDIKAL 215 >gi|157738339|ref|YP_001491023.1| 1-deoxy-D-xylulose-5-phosphate synthase [Arcobacter butzleri RM4018] gi|166920137|sp|A8EWN0|DXS_ARCB4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|157700193|gb|ABV68353.1| 1-deoxy-D-xylulose-5-phosphate synthase [Arcobacter butzleri RM4018] Length = 601 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 130 TGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFG 188 T RQ GG+S G + S + F GH +SL G A + K ++ +K+ +V G Sbjct: 80 TIRQFGGLS---GFTKPKESPADYFVAGHS--STSISLAVGAAKSIKLKKENKVPIVMIG 134 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 DG+ + G VYE+ N L V+ ++ +N+ ++ + S Sbjct: 135 DGSMSAGMVYEALNELGDLKLPVVIILNDNEMSIAKPIGAIS 176 >gi|312621697|ref|YP_004023310.1| transketolase domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312202164|gb|ADQ45491.1| Transketolase domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] Length = 282 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A A K + V GDG +GQ++E+ AA + L N+ ++ Sbjct: 118 GSLGQGLSVANGMALAGKLDGKNYRVYVLLGDGEIQEGQIWEAAMTAAHYKLDNLTAFLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + ++ + ++ +F +++DG D + +KAV + KG P Sbjct: 178 HNGLQIDGKITEVMSPEPVDEKFKAFGWHVIKIDGHDFNQI----EKAVNEAKTIKGKPT 233 Query: 276 IIEMLTYRYRGHSM 289 II T + +G S Sbjct: 234 IIIAETVKGKGVSF 247 >gi|298489917|ref|YP_003720094.1| transketolase central region ['Nostoc azollae' 0708] gi|298231835|gb|ADI62971.1| Transketolase central region ['Nostoc azollae' 0708] Length = 630 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 2/111 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICV-VCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + +G G+A A KY V V GDG +G ++E+F+ A+ + L N++ +I Sbjct: 118 GSLGQGLPIGVGVALAGKYLDQLPYNVWVLLGDGETAEGSIWEAFDHASHYTLDNLLAII 177 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 + N+ + R +F +++DG ++ + AVA Sbjct: 178 DVNRLGQRGQTELGWNTQAYGNRAKAFGWQAIEIDGHNLTEIDQAFSAAVA 228 >gi|18201641|gb|AAL65391.1| branched chain alpha-keto acid dehydrogenase E1-alpha subunit [Oryza sativa Japonica Group] Length = 85 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 39/83 (46%) Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 K + D + FGDG ++G + + N AA+ VI+ NN + + T S Sbjct: 3 KMDKKDACAITYFGDGGTSEGDFHAALNFAAVMEAPVIFFCRNNGWTISTPTSEQFRSDG 62 Query: 235 FSKRGVSFNIPGMQVDGMDIRAV 257 RG ++ + ++VDG D AV Sbjct: 63 AVIRGQAYGMRSIRVDGNDALAV 85 >gi|307323007|ref|ZP_07602260.1| transcriptional regulator, LysR family [Sinorhizobium meliloti AK83] gi|306891344|gb|EFN22277.1| transcriptional regulator, LysR family [Sinorhizobium meliloti AK83] Length = 135 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMR 305 MD+R+V A A + R KGP I+EM TYRYR SM P R+ +IN++R Sbjct: 1 MDVRSVHAARQSAFEHARTGKGPYILEMHTYRYRVRSMK-PKRDRS-MDINQVR 52 >gi|292490267|ref|YP_003525706.1| 2-oxoglutarate dehydrogenase, E1 subunit [Nitrosococcus halophilus Nc4] gi|291578862|gb|ADE13319.1| 2-oxoglutarate dehydrogenase, E1 subunit [Nitrosococcus halophilus Nc4] Length = 943 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQ 219 G A + RR D I V+ GD A A QG V E+FN++ + ++++ NNQ Sbjct: 337 GSVRARQQRRKDWLGDEVIPVLIHGDSAFAGQGVVMENFNMSQSRGFFTGGTLHIVVNNQ 396 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS + T + + P V+G D AV A Y K ++I+ Sbjct: 397 IGFTTSNPLDTRSTVYCTDVAKMVQAPIFHVNGDDPEAVVFVTHLAFDYRMTFKKDVVID 456 Query: 279 MLTYRYRGHSMSD 291 ++ YR +GH+ +D Sbjct: 457 LICYRRQGHNEAD 469 >gi|254510879|ref|ZP_05122946.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Rhodobacteraceae bacterium KLH11] gi|221534590|gb|EEE37578.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Rhodobacteraceae bacterium KLH11] Length = 985 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 37/184 (20%), Positives = 82/184 (44%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E F ++ L ++++ NNQ T+ + + Sbjct: 382 RTKVMGILLHGDAAFAGQGVVAEGFGLSGLRGHKTGGTMHIVVNNQIGFTTAPHFSRSSP 441 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+G D AV A + + ++I++ YR GH+ D Sbjct: 442 YPTDIALMVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDIFCYRRFGHNEGDEP 501 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +++++ + +RL+ + EG++++++ + +N + A D +P Sbjct: 502 MFTNPIMYKKIKTHKTTLSLYTERLVKDGLIPEGEIEDMKAAFQAHLNEEFD-AGKDYKP 560 Query: 354 DPAE 357 + A+ Sbjct: 561 NKAD 564 >gi|194744501|ref|XP_001954732.1| GF18418 [Drosophila ananassae] gi|190627769|gb|EDV43293.1| GF18418 [Drosophila ananassae] Length = 920 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 11/182 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG E N+A + + V +++I NNQ T R + S Sbjct: 327 LNVILHGDAAFAGQGINQECLNMAYVPHFEVGGSLHLIVNNQVGFTTPGDRGRSTAYTSD 386 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP--AN 294 S P V+G D A+ + A Y R + I I++ +R GH+ + DP N Sbjct: 387 LAKSIQAPVFHVNGDDPEALARITNLAFRYQREFRKDIFIDLNCFRRWGHNELDDPTFTN 446 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 + +++ S D Q +L + SE K+I + K + + A + EP Sbjct: 447 PLVYKIVHQRGSVPDSYAQ---QLAQAQVLSESQAKQIRDDYMKYLGEELALAPT-YEPP 502 Query: 355 PA 356 P+ Sbjct: 503 PS 504 >gi|3114573|gb|AAC33513.1| 1-deoxyxylulose-5-phosphate synthase [Mentha x piperita] Length = 724 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 48/198 (24%), Positives = 78/198 (39%), Gaps = 15/198 (7%) Query: 25 RAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 RA + + + IP L+ ++ N + LS L L E+ +Y + GG Sbjct: 65 RALSFTGEKPPIPILD--TINYPNHMKNLSVEELANLADELREEI--VYTVSKTGGHLSS 120 Query: 85 CIGQEAVIVGMKMSLTEGDQMI---TAYREHGHILACGVDASKIMAELTGRQGGISKGKG 141 +G + V + D I ++ + H + G A T G K + Sbjct: 121 SLGVSELTVALHHVFNTPDDKIIWDVGHQAYPHKILTGRRARMHTIRQTFGLAGFPK-RD 179 Query: 142 GSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF 201 S H + F GH +S G G+A A + + + GDGA GQ YE+ Sbjct: 180 ESAH-----DAFGAGHS--STSISAGLGMAVARDLLQKNNHVISVIGDGAMTAGQAYEAL 232 Query: 202 NIAALWNLNVIYVIENNQ 219 N A + N+I V+ +N+ Sbjct: 233 NNAGFLDSNLIIVLNDNK 250 >gi|78187054|ref|YP_375097.1| transketolase-like [Chlorobium luteolum DSM 273] gi|78166956|gb|ABB24054.1| transketolase subunit A [Chlorobium luteolum DSM 273] Length = 301 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 8/147 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG A + R GDG +GQ++E+ AA + L N+I +++ Sbjct: 135 GSLGQGLSVATGAALGQRMNRQGGHVFCLMGDGECQEGQIWEAAMSAAHYGLGNIIGIVD 194 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + V F+ + +F DG DI AT++K A P + Sbjct: 195 YNNQQIDGEVENVMGIEPFADKWRAFGWNVYHCDGNDIEDFVATVEK--VKLAAAPNPSV 252 Query: 277 IEMLTYRYRG-----HSMSDPANYRTR 298 I +T +G +M D N+ + Sbjct: 253 ILAVTIMGKGVPFFEGTMEDNTNWHGK 279 >gi|225570364|ref|ZP_03779389.1| hypothetical protein CLOHYLEM_06461 [Clostridium hylemonae DSM 15053] gi|225160896|gb|EEG73515.1| hypothetical protein CLOHYLEM_06461 [Clostridium hylemonae DSM 15053] Length = 279 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 8/116 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S+ G+ + K + S + + GDG N+GQ +E+F A L NVI +I+ Sbjct: 114 GSLGQGTSVAAGLGYGLKLKNSGRFVYLIAGDGELNEGQCWEAFQFIAHHKLHNVIVLID 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD-------IRAVKATMDKAV 265 +N+ + + + + +F V+G D +R KA D AV Sbjct: 174 DNKRQLDGYTADILNPFSLEDKMKAFGFHTETVNGADERQISDAVRRAKAVEDSAV 229 >gi|149410023|ref|XP_001509039.1| PREDICTED: similar to oxoglutarate dehydrogenase-like [Ornithorhynchus anatinus] Length = 937 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + I+V+ NNQ Sbjct: 385 AEQFYRGDTSGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTIHVVVNNQIGFT 444 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ + AV A + +I++++ YR Sbjct: 445 TDPRMARSSPYPTDVARVVNAPIFHVNADNPEAVIYVCGVAAEWRNTFNKDVIVDLVCYR 504 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 505 RRGHNEMDEP 514 >gi|257126644|ref|YP_003164758.1| transketolase [Leptotrichia buccalis C-1013-b] gi|257050583|gb|ACV39767.1| Transketolase domain protein [Leptotrichia buccalis C-1013-b] Length = 274 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K +D + GDG +GQV+E+ AA + L N++ +++ Sbjct: 118 GSLGQGLSAANGMALSAKIYNNDFRVYIILGDGELQEGQVWEAVMTAAHYKLDNLVAIVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + VS ++ +FN +++DG + + +D A + KG P Sbjct: 178 YNNLQIDGKVSDVMDVAPIGEKFKAFNWSVIEIDGHNYEEIINALDTA----KTVKGKPT 233 Query: 276 IIEMLTYRYRGHS 288 +I T + +G S Sbjct: 234 VIVANTAKGKGVS 246 >gi|240146086|ref|ZP_04744687.1| transketolase, N- subunit [Roseburia intestinalis L1-82] gi|257201799|gb|EEV00084.1| transketolase, N- subunit [Roseburia intestinalis L1-82] gi|291537544|emb|CBL10656.1| Transketolase, N-terminal subunit [Roseburia intestinalis M50/1] gi|291540078|emb|CBL13189.1| Transketolase, N-terminal subunit [Roseburia intestinalis XB6B4] Length = 279 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 7/132 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +GQV+E+ A L N++ +++ Sbjct: 115 GSLGQGISCAVGMALAGKMDHKDYRVYTLLGDGEIEEGQVWEASMFAGHRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + ++ + K+ +FN + V DG D A + +A R KG P Sbjct: 175 NNNMQIDGTLDEVCSPDPIDKKFEAFNFHVIHVADGNDF----AQLAEAFKEARETKGMP 230 Query: 275 IIIEMLTYRYRG 286 I T + +G Sbjct: 231 TAIIAHTLKGKG 242 >gi|217966620|ref|YP_002352126.1| transketolase [Dictyoglomus turgidum DSM 6724] gi|217335719|gb|ACK41512.1| Transketolase domain protein [Dictyoglomus turgidum DSM 6724] Length = 640 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 2/109 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A + K + D V GDG +GQ+ E+ A +NL N+ +I+ Sbjct: 127 GNLGQGLSAGCGMALSAKLLKKDFHVFVVMGDGEQQKGQISEARRFAKKYNLSNLTVLID 186 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 N+ + +S Q N + +S ++VDG D A+ + +A+ Sbjct: 187 YNKLQLSGPLSEIMPQ-NIKENYLSDGWEVIEVDGHDFEALYKAIREAI 234 >gi|310796732|gb|EFQ32193.1| oxoglutarate dehydrogenase [Glomerella graminicola M1.001] Length = 1043 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 9/180 (5%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE +L + I+++ NNQ T A + + Sbjct: 421 VLLHGDAAFAAQGVVYECLGFHSLPAFSTGGTIHLVVNNQIGFTTDPRFARSTAYCTDIA 480 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+ D+ AV A + + +II+++ YR GH+ +D ++ T+ Sbjct: 481 KAIDAPVFHVNADDVEAVNFVCQMAADWRAEFQQDVIIDLVCYRKHGHNETDQPSF-TQP 539 Query: 300 EINEMRSNHDP-IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS-DKEPDPAE 357 + + +H+P I +LL + ++ D++E + V ++ S F++S D +P E Sbjct: 540 LMYKRIQDHEPQISIYVNKLLEDGSFTKEDIEEHKQWVWGMLEES--FSKSKDYQPTSKE 597 >gi|293400245|ref|ZP_06644391.1| transketolase, N- subunit [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306645|gb|EFE47888.1| transketolase, N- subunit [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 272 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 7/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A NK ++ GDG +G+V+E+ AA + L N+ +++ Sbjct: 115 GSLGQGISAAVGMALGNKLAQNHHRVYALLGDGECQEGEVWEAAMAAAQYQLDNLCVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N+ + V++ + ++ +F+ + VDG + + + + KA R +KG P Sbjct: 175 HNRLQIDGEVAKVMNVDSLEEKFKAFHFHVLTVDGHAMDEILSALSKA----RENKGRPT 230 Query: 276 IIEMLTYRYRGHS-MSDPANY 295 I T + +G S M + A + Sbjct: 231 AIIANTVKGKGVSFMENQAGW 251 >gi|171690254|ref|XP_001910052.1| hypothetical protein [Podospora anserina S mat+] gi|170945075|emb|CAP71186.1| unnamed protein product [Podospora anserina S mat+] Length = 1043 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 13/184 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESF---NIAALWNLNVIYVIENNQYAMGTS--VSRASAQ-TN 234 + V+ GD A A QG VYE + A I+++ NNQ T SR++A T+ Sbjct: 419 MAVLLHGDAAVAGQGVVYECLGFHQLPAFSTGGTIHLVVNNQIGFTTDPRFSRSTAYCTD 478 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 +K + + P V+ D+ +V A + K ++I+++ YR GH+ +D + Sbjct: 479 IAK---AIDAPVFHVNADDVESVNFVCQLAADWRAEFKQDVVIDLVCYRKHGHNETDQPS 535 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS-DKEP 353 + ++ + IE +LL ++ D++E + V ++ S FA+S D +P Sbjct: 536 FTQPLMYKRIQEKNPQIEIYVDQLLKEGTFTKEDVEEHKQWVWGMLEES--FAKSKDYQP 593 Query: 354 DPAE 357 E Sbjct: 594 TSKE 597 >gi|187477701|ref|YP_785725.1| 2-oxoglutarate dehydrogenase E1 component [Bordetella avium 197N] gi|115422287|emb|CAJ48811.1| 2-oxoglutarate dehydrogenase E1 component [Bordetella avium 197N] Length = 956 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 27/179 (15%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A + RR D+ + V+ GD A A QG V E+ N+A ++++ NNQ Sbjct: 340 GSARARQERRGDQEGKQVLPVLVHGDAAFAGQGVVMETLNLAQTRGYGTGGTLHIVINNQ 399 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P V+G D AV A+ Y + ++++ Sbjct: 400 IGFTTSDPRDSRSTLYCTDVVKMIEAPVFHVNGDDPEAVVFATRLALDYRMQFRHDVVLD 459 Query: 279 MLTYRYRGH------SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 ++ +R GH S++ P Y+ R H P ++L +K ++G L E Sbjct: 460 IVCFRKLGHNEQDTPSLTQPLMYK--------RIGHHP---GTRKLYADKLTTQGVLAE 507 >gi|329942770|ref|ZP_08291549.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Chlamydophila psittaci Cal10] gi|332287364|ref|YP_004422265.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydophila psittaci 6BC] gi|313847946|emb|CBY16942.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydophila psittaci RD1] gi|325507082|gb|ADZ18720.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydophila psittaci 6BC] gi|328815030|gb|EGF85019.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Chlamydophila psittaci Cal10] gi|328914609|gb|AEB55442.1| 2-oxoglutarate dehydrogenase, E1 component [Chlamydophila psittaci 6BC] Length = 908 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 39/171 (22%), Positives = 79/171 (46%), Gaps = 8/171 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + ++ GD A + QG VYE+ ++ + + ++++ NN T+ R S T + + Sbjct: 321 LAILVHGDAAFSGQGVVYETLQLSQIPGYSTGGTLHIVVNNHIGF-TAQPRESRSTPYCT 379 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 IP +V+ D+ A ++ ++ +II++ YR GH+ SD + Sbjct: 380 DIAKMLGIPVFRVNAEDVFACLQAIEYSLKVREEFSCDVIIDLCCYRKYGHNESDDPSIT 439 Query: 297 TREEINEMRSNHDPIEQVRKRLLHN--KWASEGDLKEIEMNVRKIINNSVE 345 +E++ E +K LL N + SE L+++E +V+ +N + Sbjct: 440 APLLYDEIKKKQTIREIYKKYLLDNYREEISEDRLEKLEKSVQDTLNKEFQ 490 >gi|222054466|ref|YP_002536828.1| Transketolase domain protein [Geobacter sp. FRC-32] gi|221563755|gb|ACM19727.1| Transketolase domain protein [Geobacter sp. FRC-32] Length = 275 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K D GDG +GQV+E+ AA + L N+ +++ Sbjct: 117 GSLGQGLSMANGMALGLKADGKDNRVYAILGDGELQEGQVWEAAMAAAHYKLDNLCAMVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + VSR + + +F + +DG D+ A+ +D A KG P Sbjct: 177 ANNLQIDGEVSRVMNVAPITDKFRAFGWHVLDIDGHDMGAIMEALDAAETV----KGQPT 232 Query: 276 IIEMLTYRYRGHS 288 +I T + +G S Sbjct: 233 VIVARTVKGKGVS 245 >gi|256825652|ref|YP_003149612.1| alpha-ketoglutarate decarboxylase [Kytococcus sedentarius DSM 20547] gi|256689045|gb|ACV06847.1| 2-oxoglutarate dehydrogenase E1 component [Kytococcus sedentarius DSM 20547] Length = 1303 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 90/241 (37%), Gaps = 39/241 (16%) Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG-IVGAQVSLGT-------- 168 G ++I E G G S G G + T F G VG ++ Sbjct: 636 AGKSYAQIFREFEGESGATS-GSGDVKYHLGTSGTFTDDEGNEVGVYLAANPSHLEAVNP 694 Query: 169 ---GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 GIA A + R + + ++ GD A A QG V E+ ++ L I+++ Sbjct: 695 VLEGIARAKQDRLATNGEYPVLPILMHGDAAFAGQGVVAETLQMSRLSGYKTGGTIHIVV 754 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ TS + P V+G D A + A AY A ++ Sbjct: 755 NNQVGFTTSPLEGRTSRYSTDVAKMIEAPVFHVNGDDPEACARVAEVAFAYREAFHKDVV 814 Query: 277 IEMLTYRYRGH------SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 I+++ YR RGH SM+ P Y +N RS VRK + + GD+ Sbjct: 815 IDLVCYRRRGHNEGDDPSMTQPQMYTM---VNNKRS-------VRK-IYQDSLLGRGDID 863 Query: 331 E 331 E Sbjct: 864 E 864 >gi|13473636|ref|NP_105204.1| 2-oxoglutarate dehydrogenase E1 component [Mesorhizobium loti MAFF303099] gi|14024386|dbj|BAB50990.1| alpha-ketoglutarate dehydrogenase [Mesorhizobium loti MAFF303099] Length = 995 Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG + E ++ L V ++ I NNQ T+ + + Sbjct: 392 RAKVLPLLLHGDAAFAGQGVIAEILGLSGLRGHRVAGTLHFIINNQIGFTTNPRFSRSSP 451 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A+ + P++++M YR GH+ D Sbjct: 452 YPSDVAKMIEAPIFHVNGDDPEAVVHATKVAIEFRMKFHKPVVVDMFCYRRFGHNEGDEP 511 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +R++ ++ RL+ ++ +L +++ + R + + E Q K P Sbjct: 512 AFTQPIMYRNIRTHKTTVQIYADRLIAEGHITQAELDQMKADWRAHLESEWEVGQHYK-P 570 Query: 354 DPAE 357 + A+ Sbjct: 571 NKAD 574 >gi|291277385|ref|YP_003517157.1| acetolactate synthase large subunit [Helicobacter mustelae 12198] gi|290964579|emb|CBG40432.1| acetolactate synthase large subunit [Helicobacter mustelae 12198] Length = 562 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 26/142 (18%) Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 GG G +G + G GIAFA++ D VV GDG + I LNV +V Sbjct: 413 GGLGTMGYGIPAGIGIAFAHR----DADVVVFVGDGGFQMTN--QELAILNENELNVKFV 466 Query: 215 IENNQYAMGT-------------SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 + NN+ +G S S S Q +F ++ I G++++ T+ Sbjct: 467 LFNNK-VLGMVHQWQGEFHNKRYSASEFSTQPDFMLLAKAYGIAGVRIEN------PLTL 519 Query: 262 DKAVAYCRAHKGPIIIEMLTYR 283 ++ +A AHKG I+IE+L R Sbjct: 520 EEDLARAFAHKGSIVIEVLIPR 541 >gi|229493740|ref|ZP_04387522.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Rhodococcus erythropolis SK121] gi|229319340|gb|EEN85179.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Rhodococcus erythropolis SK121] Length = 1154 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 12/182 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N++ L ++++ NNQ T+ + + + Sbjct: 565 LPLMLHGDAAFAGQGVVAETLNLSLLRGYRTGGTVHIVVNNQVGFTTAPEHSRSSEYCTD 624 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + ++I+++ YR RGH SM+ Sbjct: 625 VAKMIAAPVFHVNGDDPEACVWVAQLAVDFREKFGKDVVIDLICYRRRGHNEGDDPSMTQ 684 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 PA Y + +R ++ E + R + +E L++ + + ++ N E + Sbjct: 685 PAMYDVIDTKRSVRKSY--TESLIGRGDISLKEAEDALRDYQGQLERVFNEVRELEKFQP 742 Query: 352 EP 353 EP Sbjct: 743 EP 744 >gi|270308062|ref|YP_003330120.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dehalococcoides sp. VS] gi|270153954|gb|ACZ61792.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dehalococcoides sp. VS] Length = 647 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 80/213 (37%), Gaps = 62/213 (29%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS G + S + F GH +S G G+A A ++ Sbjct: 96 LTGRREQFATLRQHGGIS---GFTCRDESPHDPFGAGHA--STSISAGLGMAVARDLAKA 150 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN----- 234 D + GDGA + G +E+ N A + I ++ +N A+ S S N Sbjct: 151 DYSVISVIGDGAISGGMSFEAINNAGHLHTKFIVILNDNGMAISPSTGALSKFLNNVRFD 210 Query: 235 ----FSKRGVSFNIPGM------------------------------------QVDGMDI 254 F+KRG I M VDG +I Sbjct: 211 PRFEFAKRGAKQTITNMPFGKAVWAFTKSIKHKFEKSMLPGSLWEELGFIYLGPVDGHNI 270 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R ++A + +A + P++I M+T + +G+ Sbjct: 271 RELEAALKRAKDF---ESQPVLIHMITQKGKGY 300 >gi|313141778|ref|ZP_07803971.1| 1-deoxyxylulose-5-phosphate synthase [Helicobacter canadensis MIT 98-5491] gi|313130809|gb|EFR48426.1| 1-deoxyxylulose-5-phosphate synthase [Helicobacter canadensis MIT 98-5491] Length = 618 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 11/155 (7%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGG 135 GG C+G +I+ M + D I +++ + H L G S E + G Sbjct: 36 GGHLSSCLGSVELIIAMHCVFDSPNDPFIFDVSHQAYAHKLLTGRWDS---FETLRQTNG 92 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG 195 IS G + S + F GH +SLG GIA A S I VV GDGA + G Sbjct: 93 IS---GFTKPQESNHDYFIAGHS--STSISLGVGIAKAFALNHSKNIPVVLIGDGAMSAG 147 Query: 196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 YE+ N ++ ++ +N+ ++ + S Sbjct: 148 LAYEALNELGDRKYPMVIILNDNEMSIAEPIGAIS 182 >gi|15922599|ref|NP_378268.1| transketolase [Sulfolobus tokodaii str. 7] gi|15623389|dbj|BAB67377.1| 273aa long hypothetical transketolase [Sulfolobus tokodaii str. 7] Length = 273 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 5/130 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A K R + V GDG ++G+V+E+ A L N+I IE Sbjct: 124 GSLGQGLSFGIGVAQGIKMRGGNGRVFVIMGDGEQDEGEVWEAMTHAVTRKLDNIIAFIE 183 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + + S + + + DG D ++ T+++A+ K P++ Sbjct: 184 MNGFQLDAATSEVKPKDFLPDVWKAVGWKTLSCDGHDFISLINTIEEALKA----KAPVV 239 Query: 277 IEMLTYRYRG 286 I T R G Sbjct: 240 IFAKTRRGMG 249 >gi|194744634|ref|XP_001954798.1| GF18452 [Drosophila ananassae] gi|190627835|gb|EDV43359.1| GF18452 [Drosophila ananassae] Length = 626 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 2/101 (1%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++G G+A+ K Y ++D V GDG + +G V+ES + A + L N+ Sbjct: 120 GTGSLGQGVAVGAGMAYVGKNYDKADYRTYVIVGDGESAEGSVWESLHFAGHYGLDNLCV 179 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + + N+ + S + R +F + VDG D+ Sbjct: 180 IFDVNRLGQSEATSLQHKLDIYRDRLEAFGFNTLVVDGHDV 220 >gi|50085916|ref|YP_047426.1| 2-oxoglutarate dehydrogenase E1 component [Acinetobacter sp. ADP1] gi|49531892|emb|CAG69604.1| 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex (E1) [Acinetobacter sp. ADP1] Length = 946 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 309 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRKDIGGDDVLPVIVHGDAAFAG 362 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V ++++ NNQ TS R + T + + P V Sbjct: 363 QGVNQETFQMSQTRGYTVGGTVHIVINNQVGFTTSDPRDARSTEYCTDVAKMVQSPIFHV 422 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +G D AV A + + ++I++ YR RGH+ +D Sbjct: 423 NGDDPEAVAFIAQLAHDFRHTFRKDVVIDLFCYRRRGHNEAD 464 >gi|160892813|ref|ZP_02073602.1| hypothetical protein CLOL250_00343 [Clostridium sp. L2-50] gi|156865372|gb|EDO58803.1| hypothetical protein CLOL250_00343 [Clostridium sp. L2-50] Length = 282 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + GDG +GQ++E+ A L N++ +++ Sbjct: 119 GSLGQGLSAAVGMALAAKMSGKEYRTYCLCGDGEIQEGQIWEAAMFAGHRKLDNLLVIVD 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + +V + K+ +FN + +DG D + A +A +A KG P Sbjct: 179 NNNLQIDGTVEDVCSPYPIDKKFEAFNFHVINIDGNDFDQIDAAFKEA----KATKGMPT 234 Query: 276 IIEMLTYRYRGHSM 289 I T + +G S Sbjct: 235 AIIAHTVKGKGVSF 248 >gi|294651214|ref|ZP_06728542.1| 2-oxoglutarate dehydrogenase E1 component [Acinetobacter haemolyticus ATCC 19194] gi|292822867|gb|EFF81742.1| 2-oxoglutarate dehydrogenase E1 component [Acinetobacter haemolyticus ATCC 19194] Length = 950 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 313 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRKDIGGDDVLPVIVHGDAAFAG 366 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V ++++ NNQ TS R + T + + P V Sbjct: 367 QGVNQETFQMSQTRGYTVGGTVHIVINNQVGFTTSDPRDTRSTEYCTDVAKMIQAPIFHV 426 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +G D AV A + + +I+++ YR RGH+ +D Sbjct: 427 NGDDPEAVIFATQLAHDFRHEFRKDVILDLFCYRRRGHNEAD 468 >gi|302558459|ref|ZP_07310801.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Streptomyces griseoflavus Tu4000] gi|302476077|gb|EFL39170.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Streptomyces griseoflavus Tu4000] Length = 1267 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + + S++++ Sbjct: 682 LPVAIHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAAPESSRSSMYA 739 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD Sbjct: 740 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESD 795 >gi|296313441|ref|ZP_06863382.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria polysaccharea ATCC 43768] gi|296840031|gb|EFH23969.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria polysaccharea ATCC 43768] Length = 634 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKQLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|332291500|ref|YP_004430109.1| 2-oxoglutarate dehydrogenase, E1 subunit [Krokinobacter diaphorus 4H-3-7-5] gi|332169586|gb|AEE18841.1| 2-oxoglutarate dehydrogenase, E1 subunit [Krokinobacter diaphorus 4H-3-7-5] Length = 938 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 4/184 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A A QG VYE +A L I+++ NNQ T+ A + T + Sbjct: 355 LPIAIHGDAAVAGQGIVYEIVQMAQLEGYRTGGTIHIVANNQVGFTTNYLDARSSTYSTD 414 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 G P + V+G D+ +V A+ + + +++L YR GH+ D + Sbjct: 415 VGKVTLSPVLHVNGDDVESVCHAFAFALDFRMKFGRDVFVDILGYRKYGHNEGDEPRFTQ 474 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 + + P + +RL+ +G +K++E + + +E ++ + E Sbjct: 475 PLLYKAIAKHASPRDIYAERLIKEGVIQDGHVKQLEKEYKDDLEEDLEESRKKDKTVITE 534 Query: 358 LYSD 361 + +D Sbjct: 535 ILAD 538 >gi|146302239|ref|YP_001196830.1| transketolase domain-containing protein [Flavobacterium johnsoniae UW101] gi|146156657|gb|ABQ07511.1| Transketolase domain protein [Flavobacterium johnsoniae UW101] Length = 804 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 68/306 (22%), Positives = 129/306 (42%), Gaps = 44/306 (14%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACG-VDASKIMAEL------------TGRQ 133 G+E + M + +GD YR+ ++A G ++A + A L GRQ Sbjct: 53 GKEVPQLAMAKAFKDGDFRSGYYRDQTFMMAIGELNAKQFFAGLYGHTDLNYDPMSAGRQ 112 Query: 134 GG-----ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK-YRRSDKICVV-- 185 G S + GS + + Q+ G+A A+K YR D I + Sbjct: 113 MGGHFVTHSLNEDGSWKDLTKQKNSSSDISPTAGQMPRLLGLAQASKIYRNVDGIKIKDK 172 Query: 186 -----------CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 G+ + ++G +E+ N A + + ++ + +++Y + + + N Sbjct: 173 FTVNGNEVAWGTIGNASTSEGLFFETINAAGVLQVPMVMSVWDDEYGISVHAKHQTTKEN 232 Query: 235 FSK--RGV-----SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM--LTYRYR 285 S+ +G S +V G D + +T ++A A R PI+I + LT + + Sbjct: 233 ISEILKGYQRDEDSKGYEIFRVKGWDYAELVSTYERAGAVAREEHIPILIHVNELT-QPQ 291 Query: 286 GHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS S Y++ E + R + D I Q+R ++ AS +L E++ ++K + + Sbjct: 292 GHSTSGSHERYKSAERLAWER-DFDCIRQMRLWMIAINIASPEELAELDAELKKEVLEAK 350 Query: 345 EFAQSD 350 + A +D Sbjct: 351 KEAWND 356 >gi|300865153|ref|ZP_07109977.1| Transketolase, N terminal [Oscillatoria sp. PCC 6506] gi|300336843|emb|CBN55127.1| Transketolase, N terminal [Oscillatoria sp. PCC 6506] Length = 279 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 18/131 (13%) Query: 147 FSTKNGFYGGH-------------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 F +G GGH G +G +S+G G A +Y +++ V GDG +N Sbjct: 98 FCQSDGILGGHPEARKVPGVEASTGSLGHGLSIGIGFALNARYEKANYRTFVILGDGESN 157 Query: 194 QGQVYESFNIAA---LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD 250 +G ++E+ A L NL V+ V N + GT+ + + + +F +VD Sbjct: 158 EGSIWEAAMCAGKHKLSNLTVL-VDYNKHQSYGTTYEVQDLEP-LADKWRAFGFAATEVD 215 Query: 251 GMDIRAVKATM 261 G + +++ + Sbjct: 216 GHSVEELRSVL 226 >gi|226951557|ref|ZP_03822021.1| 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex (E1) [Acinetobacter sp. ATCC 27244] gi|226837699|gb|EEH70082.1| 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex (E1) [Acinetobacter sp. ATCC 27244] Length = 950 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 313 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRKDIGGDDVLPVIVHGDAAFAG 366 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V ++++ NNQ TS R + T + + P V Sbjct: 367 QGVNQETFQMSQTRGYTVGGTVHIVINNQVGFTTSDPRDTRSTEYCTDVAKMIQAPIFHV 426 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +G D AV A + + +I+++ YR RGH+ +D Sbjct: 427 NGDDPEAVIFATQLAHDFRHEFRKDVILDLFCYRRRGHNEAD 468 >gi|159045423|ref|YP_001534217.1| 2-oxoglutarate dehydrogenase E1 component [Dinoroseobacter shibae DFL 12] gi|157913183|gb|ABV94616.1| 2-oxoglutarate dehydrogenase E1 component [Dinoroseobacter shibae DFL 12] Length = 987 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 36/180 (20%), Positives = 78/180 (43%), Gaps = 5/180 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E F ++ L I+++ NNQ T+ + + + Sbjct: 389 LPILLHGDAAFAGQGVVAECFALSGLRGHKTGGTIHIVVNNQIGFTTAPHFSRSSPYPTD 448 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P V+G D AV A + + +++++ YR GH+ D + Sbjct: 449 NALVVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVLDIFCYRRFGHNEGDEPMFTN 508 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 ++ + ++ RL+ + EG++++++ + +N E + D +P+ A+ Sbjct: 509 PIMYKRIKGHKTTLQLYTDRLVKDGLIPEGEIEDMKAAFQAHLNEEFEIGK-DYKPNKAD 567 >gi|19703639|ref|NP_603201.1| transketolase subunit A [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296329443|ref|ZP_06871932.1| transketolase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19713753|gb|AAL94500.1| Transketolase subunit A [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296153452|gb|EFG94282.1| transketolase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 270 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 23/190 (12%) Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH-------GIVGAQVSLG 167 +L+ G A I A L +G SK + ++ F ++ GH GI + SLG Sbjct: 64 VLSKGHAAPAIYATLA-EKGYFSKDELMTLRKFGSR---LQGHPDMKKLSGIEISTGSLG 119 Query: 168 TGIAFANKYRRSDKI------CVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQY 220 G++ AN + KI V GDG +GQ++E+ AA + L N+ +++N Sbjct: 120 QGLSVANGMALNAKIFDENYRTYVVLGDGEIQEGQIWEAAMTAAHYKLDNLCAFLDSNNL 179 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEM 279 + +V+ K+ +F +++DG D + + ++KA R KG P +I Sbjct: 180 QIDGNVTEIKGVEPLDKKWEAFGWNVIKIDGHDFEQILSALEKA----RECKGKPTMIIA 235 Query: 280 LTYRYRGHSM 289 T + +G S Sbjct: 236 KTIKGKGVSF 245 >gi|291522833|emb|CBK81126.1| Transketolase, N-terminal subunit [Coprococcus catus GD/7] Length = 279 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 8/150 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K D GDG +GQV+E+ A L N++ +++ Sbjct: 115 GSLGQGISAAVGMALSAKLSHDDYRVYTLLGDGEIQEGQVWEASMFAGHRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGM-QVDGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + +++ + K+ +FN + VD D A++A +A R KG P Sbjct: 175 NNGLQIDGNIADVCSPYPIDKKFEAFNFHVIADVDAHDFEALRAAFKEA----RETKGMP 230 Query: 275 IIIEMLTYRYRGHS-MSDPANYRTREEINE 303 I + + + +G S M + A + + +E Sbjct: 231 TAIILKSVKGKGVSFMENKAGWHGKAPNDE 260 >gi|239833051|ref|ZP_04681380.1| 2-oxoglutarate dehydrogenase, E1 component [Ochrobactrum intermedium LMG 3301] gi|239825318|gb|EEQ96886.1| 2-oxoglutarate dehydrogenase, E1 component [Ochrobactrum intermedium LMG 3301] Length = 1000 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 398 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTVHFIINNQIGFTTNPAFSRSSP 457 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 458 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 517 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R + ++ ++L+ + ++ +++ R+ + E QS K P Sbjct: 518 SFTQPLMYKAIRGHKTTVQLYSEKLIAEGLIKQEEIDQMKAQWRENLEAEFEAGQSYK-P 576 Query: 354 DPAE 357 + A+ Sbjct: 577 NKAD 580 >gi|149743581|ref|XP_001499323.1| PREDICTED: similar to dehydrogenase E1 and transketolase domain containing 1 [Equus caballus] Length = 920 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + +++I NNQ T R + S Sbjct: 327 ICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSVHLIVNNQLGYTTPAERGRSSLYCSD 386 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G V A Y R + +I+++L YR GH+ ++ Sbjct: 387 IGKLVGCAIVHVNGDSPEEVVRATRLAFEYQRRFRKDVIVDLLCYRQWGHNELDEPFFTN 446 Query: 292 PANY---RTREEINEMRSNH 308 P Y R R+ I + + H Sbjct: 447 PVMYKIIRARKSIPDTYAEH 466 >gi|327480486|gb|AEA83796.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas stutzeri DSM 4166] Length = 943 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDKI-----CVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQ 219 G A + RR+D + V GD A A QG V E+F ++ A I ++ NNQ Sbjct: 338 GSVRARQDRRNDPVGDKVLPVTIHGDAAVAGQGVVMETFQMSQTRAYRTGGTIRIVVNNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 T+ + T ++ P V+ D AV AV Y K I+I+ Sbjct: 398 VGFTTNKQEDARSTEYATDVAKMIQAPIFHVNADDPEAVLFVTQLAVDYRMQFKRDIVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LICYRRRGHNEAD 470 >gi|161899034|ref|YP_314946.2| 2-oxoglutarate dehydrogenase E1 component [Thiobacillus denitrificans ATCC 25259] Length = 1001 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQ 219 G A + RR D + V+ GD A + QG V ES N++ N I+V+ NNQ Sbjct: 395 GSVRARQDRRGDVLGYEVVPVILHGDAALSGQGVVMESLNMSQTRGFRNGGAIHVVINNQ 454 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R T + + P + V+G D AV + AV Y + I+ Sbjct: 455 IGFTTSDPRDVRSTLYCTDVAKMVEAPVLHVNGDDPEAVAFAVQTAVDYRYTFHKNVFID 514 Query: 279 MLTYRYRGHSMSD 291 ++ YR GH+ D Sbjct: 515 LVCYRRHGHNEQD 527 >gi|289646756|ref|ZP_06478099.1| transketolase, N-terminal subunit, putative [Pseudomonas syringae pv. aesculi str. 2250] gi|330871320|gb|EGH06029.1| transketolase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 256 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 84/213 (39%), Gaps = 15/213 (7%) Query: 70 GQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIM 126 GQ+ G G VG G L + + E +Q Y GH A + A+ I Sbjct: 2 GQVQGQGYVGQALGAADLLAVSYFHALNYRPEDPEWEQRDRFYLSIGH-YAIALYAALIE 60 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FANKYRRSDKI 182 AE+ + G S S + G I G + G GIA K + S Sbjct: 61 AEIVPLDELETYGSDDSRLPMSGMATYTPGMEITGGSLGHGLGIAVGACLGLKRKASRSF 120 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGV 240 DG N+G +E+ A+ W L N+I +++ NNQ A G S S A R Sbjct: 121 VYNLLSDGELNEGSTWEAAMSASHWKLDNLIAIVDVNNQQADGHS-SEVLAFEPIVDRWQ 179 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 +F +VDG D+ A+ A D A R H G Sbjct: 180 AFGWFTQRVDGNDLDALVAAFDNA----RQHDG 208 >gi|146282238|ref|YP_001172391.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas stutzeri A1501] gi|145570443|gb|ABP79549.1| 2-oxoglutarate dehydrogenase, E1 component [Pseudomonas stutzeri A1501] Length = 943 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 15/161 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI-----CVVCFGDGA-ANQ 194 GG +H+ F H + + V G+ A + RR+D + V GD A A Q Sbjct: 315 GGEIHL---AMAFNPSHLEIVSPVVEGS--VRARQDRRNDPVGDKVLPVTIHGDAAVAGQ 369 Query: 195 GQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS-FNIPGMQVD 250 G V E+F ++ A I ++ NNQ T+ + T ++ P V+ Sbjct: 370 GVVMETFQMSQTRAYRTGGTIRIVVNNQVGFTTNKQEDARSTEYATDVAKMIQAPIFHVN 429 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 D AV AV Y K I+I+++ YR RGH+ +D Sbjct: 430 ADDPEAVLFVTQLAVDYRMQFKRDIVIDLICYRRRGHNEAD 470 >gi|47228548|emb|CAG05368.1| unnamed protein product [Tetraodon nigroviridis] Length = 1005 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 9/118 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRASAQTNF 235 + ++ GD A A QG VYE+F+++ L + I+V+ NNQ T V+R+S Sbjct: 376 MSLLLHGDAAFAGQGVVYETFHLSDLPSYTTHGTIHVVVNNQIGFTTDPRVARSSPHPTD 435 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 R V N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 436 VARVV--NAPIFHVNADDAEAVIYVCKVATEWRNTFHKDVVVDLVCYRRNGHNEMDEP 491 >gi|321312187|ref|YP_004204474.1| transketolase, thiamine diphosphate binding domain (N-terminal subunit) [Bacillus subtilis BSn5] gi|320018461|gb|ADV93447.1| transketolase, thiamine diphosphate binding domain (N-terminal subunit) [Bacillus subtilis BSn5] Length = 278 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 1/107 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +GQ++E+ A ++L N+I ++ Sbjct: 118 GSLGQGLSCAVGMALAGKRDGKDYRVFAMVGDGECQEGQIWEAVQTAVKYSLDNLIVFVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 NN+ + + K+ F ++DG ++ + +DK Sbjct: 178 NNRLQIDGYCDEVMPLQDIEKKFEVFGFETKRIDGHSMKEIVEILDK 224 >gi|226307609|ref|YP_002767569.1| 2-oxoglutarate dehydrogenase E1 component [Rhodococcus erythropolis PR4] gi|226186726|dbj|BAH34830.1| 2-oxoglutarate dehydrogenase E1 component [Rhodococcus erythropolis PR4] Length = 1253 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 12/182 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N++ L ++++ NNQ T+ + + + Sbjct: 664 LPLMLHGDAAFAGQGVVAETLNLSLLRGYRTGGTVHIVVNNQVGFTTAPEHSRSSEYCTD 723 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + ++I+++ YR RGH SM+ Sbjct: 724 VAKMIAAPVFHVNGDDPEACVWVAQLAVDFREKFGKDVVIDLICYRRRGHNEGDDPSMTQ 783 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 PA Y + +R ++ E + R + +E L++ + + ++ N E + Sbjct: 784 PAMYDVIDTKRSVRKSY--TESLIGRGDISLKEAEDALRDYQGQLERVFNEVRELEKFQP 841 Query: 352 EP 353 EP Sbjct: 842 EP 843 >gi|164424833|ref|XP_963248.2| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor [Neurospora crassa OR74A] gi|157070681|gb|EAA34012.2| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor [Neurospora crassa OR74A] Length = 1043 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 4/112 (3%) Query: 184 VVCFGDGA-ANQGQVYESF---NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE N+ A I+++ NNQ T A + + Sbjct: 421 VLLHGDAAIAGQGIVYECLGFHNLPAFSTGGTIHLVVNNQIGFTTDPRFARSTAYCTDIA 480 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + + P V+ D+ AV A + K +II+++ YR GH+ +D Sbjct: 481 KAIDAPVFHVNADDVEAVNFVCQLASDWRAEFKQDVIIDLVCYRKHGHNETD 532 >gi|308481149|ref|XP_003102780.1| hypothetical protein CRE_29912 [Caenorhabditis remanei] gi|308260866|gb|EFP04819.1| hypothetical protein CRE_29912 [Caenorhabditis remanei] Length = 618 Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 2/109 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + TG+A+ KY V C GDG + +G V+E+ A+++ L N++ ++ Sbjct: 119 GSLGQGLGVATGMAYVGKYIDKASYRVFCLLGDGESAEGSVWEAAAFASIYKLDNLVAIV 178 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 + N+ + S + R +F + VDG ++ + A + A Sbjct: 179 DVNRLGQSQATSLGHDVETYKARFAAFGFNAIIVDGHNVEELLAAYETA 227 >gi|260889525|ref|ZP_05900788.1| 1-deoxy-D-xylulose 5-phosphate synthase [Leptotrichia hofstadii F0254] gi|260860936|gb|EEX75436.1| 1-deoxy-D-xylulose 5-phosphate synthase [Leptotrichia hofstadii F0254] Length = 592 Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 28/177 (15%) Query: 129 LTGRQGGI------SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 +TGR+ G S+ G + S + F GH VSL TG+A A R + Sbjct: 90 ITGRKFGFLDLDRYSEVSGYTNQDESEHDFFKIGH--TSTSVSLATGLAKARDLRGVKEN 147 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS------------VSRAS 230 + GDG+ + G+ +E N+A+ N N+I + +N ++ + S Sbjct: 148 IIAIIGDGSLSGGEAFEGLNVASELNTNMIIIANDNDMSIAENHGGLYKNLRELRESNGQ 207 Query: 231 AQTNFSKRGVSFNIPGMQVD-GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 AQ N+ K S + + VD G D+ A+ +K + PI++ + T + +G Sbjct: 208 AQNNYFK---SLGLDYIYVDKGNDLEALIEVFEK----VKDINHPIVVHVHTQKGKG 257 >gi|225575488|ref|ZP_03784098.1| hypothetical protein RUMHYD_03578 [Blautia hydrogenotrophica DSM 10507] gi|225037285|gb|EEG47531.1| hypothetical protein RUMHYD_03578 [Blautia hydrogenotrophica DSM 10507] Length = 279 Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 7/135 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K GDG +GQV+E+ +A L N++ +++ Sbjct: 115 GSLGQGISAAVGMAISAKLSDESYRVYTLLGDGEIQEGQVWEAAMMAGHRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + +++ + K+ +FN ++V DG D+ ++ +A A R KG P Sbjct: 175 NNGLQIDGDIAQVCSPYPIGKKFEAFNFHVIEVEDGNDMDQLR----EAFAEARQTKGMP 230 Query: 275 IIIEMLTYRYRGHSM 289 I M T + +G S Sbjct: 231 TAIVMKTVKGKGVSF 245 >gi|116254167|ref|YP_770005.1| 2-oxoglutarate dehydrogenase E1 component [Rhizobium leguminosarum bv. viciae 3841] gi|115258815|emb|CAK09921.1| putative 2-oxoglutarate dehydrogenase E1 component [Rhizobium leguminosarum bv. viciae 3841] Length = 1027 Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust. Identities = 39/184 (21%), Positives = 83/184 (45%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG + E ++ L V ++VI NNQ T+ + + + Sbjct: 424 RAKVLPLLIHGDAAFAGQGVIAEILGLSGLRGHRVAGTMHVIINNQIGFTTNPAFSRSSP 483 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P + V+G D AV A + P+++++ YR GH+ D Sbjct: 484 YPSDVAKMIEAPILHVNGDDPEAVVYGAKIATEFRMKFHKPVVLDLFCYRRYGHNEGDEP 543 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ + +R++ ++ RL+ ++G++++++ + R + + Q K P Sbjct: 544 SFTQPKMYKVIRAHKTVLQLYAARLVAEGLLTDGEVEKMKADWRAHLEQEFDAGQHYK-P 602 Query: 354 DPAE 357 + A+ Sbjct: 603 NKAD 606 >gi|239627501|ref|ZP_04670532.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239517647|gb|EEQ57513.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 621 Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 2/96 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G GIA + D V GDGA G YE+ N AA Sbjct: 105 SPYDSFDTGHS--STSISAGLGIALGRDLKGLDYKVVSVIGDGALTGGMAYEALNNAARM 162 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 N I V+ +N+ ++ +V S N + G +N Sbjct: 163 KRNFIIVLNDNKMSISENVGGMSRYLNGLRTGSGYN 198 >gi|144898025|emb|CAM74889.1| 2-oxoglutarate dehydrogenase E1 component [Magnetospirillum gryphiswaldense MSR-1] Length = 987 Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 5/125 (4%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRA 229 N R + ++ GD A A QG V E+ ++ L I++I NNQ T+ + Sbjct: 366 NDAERKKVVGILLHGDAAFAGQGVVPETMLLSQLKGYCTGGTIHIIINNQIGFTTAPEYS 425 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + S F P + V+ D AV A Y + ++I+M+ YR GH+ Sbjct: 426 RSGPYSSDVAKGFQCPVLHVNADDPEAVVHVARIATEYRQEFGADVVIDMICYRRHGHNE 485 Query: 290 SD-PA 293 SD PA Sbjct: 486 SDEPA 490 >gi|219850562|ref|YP_002464995.1| 2-oxoglutarate dehydrogenase E1 component [Chloroflexus aggregans DSM 9485] gi|219544821|gb|ACL26559.1| 2-oxoglutarate dehydrogenase, E1 subunit [Chloroflexus aggregans DSM 9485] Length = 941 Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 5/147 (3%) Query: 180 DKICVVCFGDGA-ANQGQVYESFNIAAL---WNLNVIYVIENNQYAMGTSVSRASAQTNF 235 + + ++ GD A QG V E+ N++ L I++I NNQ T S + + Sbjct: 334 ESLAILIHGDAAFPGQGIVAETLNLSRLKGYHIGGTIHIIINNQIGFTTDSSDSRSTLYA 393 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 S IP + V+ D+ A A A AY + +I+++ YR GH+ D + Sbjct: 394 SDLARGLEIPVVHVNADDVEACIAAARMASAYREKFQKDFLIDLVGYRRWGHNEGDEPEF 453 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNK 322 T+ ++ E NH + ++ R L + Sbjct: 454 -TQPKMYERIRNHPTVREIWARELERR 479 >gi|16416078|emb|CAB91484.2| probable oxoglutarate dehydrogenase precursor [Neurospora crassa] Length = 1087 Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 4/112 (3%) Query: 184 VVCFGDGA-ANQGQVYESF---NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE N+ A I+++ NNQ T A + + Sbjct: 465 VLLHGDAAIAGQGIVYECLGFHNLPAFSTGGTIHLVVNNQIGFTTDPRFARSTAYCTDIA 524 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + + P V+ D+ AV A + K +II+++ YR GH+ +D Sbjct: 525 KAIDAPVFHVNADDVEAVNFVCQLASDWRAEFKQDVIIDLVCYRKHGHNETD 576 >gi|120555349|ref|YP_959700.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter aquaeolei VT8] gi|120325198|gb|ABM19513.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter aquaeolei VT8] Length = 643 Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust. Identities = 73/356 (20%), Positives = 137/356 (38%), Gaps = 81/356 (22%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 + ++R T +D +D+P ++ +EL A L L R E +A L+ +G GG Sbjct: 10 IPSQRPNTPLLDRIDVP----------SQLRELPAEDLPRLAR--ELRAFLLWSVGQTGG 57 Query: 81 FCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGR--QGG 135 +G + V + T D+++ ++ + H + LTGR Q G Sbjct: 58 HFGAGLGVLELTVALHYVFNTPEDRLVWDVGHQAYPHKI------------LTGRKEQMG 105 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 + KGG Y G+ +S G+A A + + + + + GDGA Sbjct: 106 SIRRKGGLAGFPKRAESEYDTFGVGHSSTSISAALGMAIAARMQNTGRKSIAVIGDGAMT 165 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSV------------SRASAQTNFSKRGVS 241 G +E+ N A + +++ V+ +N ++ +V SR Q S + V Sbjct: 166 AGMAFEALNHAGHLHADMLVVLNDNDMSISRNVGGLSNYFAKLLSSRTYNQVRDSSKKVL 225 Query: 242 FNIP--------------GM----------------QVDGMDIRAVKATMDKAVAYCRAH 271 P GM +DG D+ + T++ R Sbjct: 226 KGTPHLMALAKKTEEHFKGMIAPGTLFEELGFNYIGPIDGHDLPLLVETLEN----IREL 281 Query: 272 KGPIIIEMLTYRYRGHSM--SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 +GP + ++T + +G + +DP Y +I + ++ E V+ + K+A+ Sbjct: 282 EGPQFLHVVTTKGKGFAPAEADPIGYHAINKIEPVPASKP--EPVKPKPASPKYAN 335 >gi|301608784|ref|XP_002933951.1| PREDICTED: 2-oxoglutarate dehydrogenase-like, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 1018 Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + V+ GD A A QG VYE+F+++ L + I+++ NNQ Sbjct: 385 AEQFYRGDSHGNKVMSVLVHGDAAFAGQGVVYETFHLSDLPSYTTNGTIHIVVNNQIGFT 444 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 445 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVMYVCSVAAEWRNTFNKDVVVDLVCYR 504 Query: 284 YRGHS-MSDP 292 GH+ M +P Sbjct: 505 RSGHNEMDEP 514 >gi|160891340|ref|ZP_02072343.1| hypothetical protein BACUNI_03789 [Bacteroides uniformis ATCC 8492] gi|156858747|gb|EDO52178.1| hypothetical protein BACUNI_03789 [Bacteroides uniformis ATCC 8492] Length = 277 Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 13/157 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G GIA A K D V GDG +G +YE+ A + L N++ +I+ Sbjct: 114 GALGHGLSVGVGIAIAAKMDNRDYKTYVLMGDGEQGEGSIYEAAMAARQYRLDNLVAIID 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + + R +F ++G D+ + T +++ Y H P + Sbjct: 174 RNHLQISGNTEDVMGIDDIHDRWTAFGWEVKDMNGDDMEDIIRTF-RSIDYANRH--PHL 230 Query: 277 IEMLTYRYRGHSMSD---------PANYRTREEINEM 304 + T + +G S + P+N + + I E+ Sbjct: 231 LVAHTTKGKGVSFMEGVAKWHHGVPSNEQYEQAIQEI 267 >gi|309779180|ref|ZP_07673943.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Ralstonia sp. 5_7_47FAA] gi|308921984|gb|EFP67618.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Ralstonia sp. 5_7_47FAA] Length = 864 Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 5/133 (3%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQ 219 V G A +++ + + V+ GD A A QG V E+ N+ V++VI NNQ Sbjct: 271 VVCGMARAHVDEHPGTPCLPVMVHGDAAFAGQGVVMETLNLTRRSGYTAGGVVHVIVNNQ 330 Query: 220 YAMGT-SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 T +V A + + P + V+ D AV A+AY H I+I+ Sbjct: 331 IGFTTPNVMDVRAHDYCTDVTRMVDAPVLHVNADDPEAVVRAARIAIAYRMEHGADIVID 390 Query: 279 MLTYRYRGHSMSD 291 ++ YR GHS D Sbjct: 391 LIGYRRLGHSEHD 403 >gi|242024794|ref|XP_002432811.1| 2-oxoglutarate dehydrogenase, putative [Pediculus humanus corporis] gi|212518320|gb|EEB20073.1| 2-oxoglutarate dehydrogenase, putative [Pediculus humanus corporis] Length = 1023 Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 8/169 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRASAQTNF 235 + ++ GD A A QG VYE+F+++ L + I++I NNQ T SR+SA Sbjct: 413 MSMLLHGDAAFAGQGVVYETFHLSDLPDYTTHGTIHIIVNNQIGFTTDPRYSRSSAYCTD 472 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 R V N P V+ D +V + A + ++I+++ YR GH+ D + Sbjct: 473 VARVV--NAPIFHVNSDDPESVIHVCNIAAEWRATFHKDVVIDIVCYRRNGHNEIDEPMF 530 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +++ +++ ++L+ + ++K+++ KI ++ Sbjct: 531 TQPLMYRKIKKTPPAVQKYAEKLIGEGIVTPEEVKDVKEKYDKICEEAL 579 >gi|182417967|ref|ZP_02949276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium butyricum 5521] gi|237668925|ref|ZP_04528909.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378138|gb|EDT75673.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium butyricum 5521] gi|237657273|gb|EEP54829.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 618 Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust. Identities = 45/216 (20%), Positives = 79/216 (36%), Gaps = 51/216 (23%) Query: 129 LTGRQGGISKGKG-GSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G + M F +N F GH +S GIA A +R + Sbjct: 81 LTGRKDGFKNLRQFNGMSGFPKRNESNYDCFDTGHS--STSISAALGIARARDLKRENYH 138 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 + GDGA G E+ N +I V+ +NQ ++ T+V S N + ++ Sbjct: 139 VIAVIGDGALTGGMALEALNDVGFRKTKLIVVLNDNQMSISTNVGGLSRYLNKLRMAPTY 198 Query: 243 N----------------------------------IPGMQVDGMDIRAVKA-------TM 261 N +P M + M ++ + M Sbjct: 199 NKLKNEIHDSLNQSYIGKNIAVKLSKVKDSIKQLVVPSMLFENMGLKYIGPIDGHNIEAM 258 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMSD--PANY 295 + + GP+II +T + +G+++++ P+ Y Sbjct: 259 TEVFKIAKDFDGPVIIHTITQKGKGYALAEKSPSKY 294 >gi|156054172|ref|XP_001593012.1| hypothetical protein SS1G_05934 [Sclerotinia sclerotiorum 1980] gi|154703714|gb|EDO03453.1| hypothetical protein SS1G_05934 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1048 Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 7/179 (3%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE +L + I+++ NNQ T A + + Sbjct: 427 VLLHGDAAFAAQGVVYECLGFHSLPAYSTGGTIHLVVNNQIGFTTDPRFARSTAYCTDIA 486 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 S + P V+ D+ AV A + + ++I+++ YR GH+ +D ++ Sbjct: 487 KSIDAPVFHVNADDVEAVNYVCQLAADWRAEFQRDVVIDLVCYRKHGHNETDQPSFTQPL 546 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS-DKEPDPAE 357 ++ + I+ +LL + ++ D+ E V ++ +S FA+S D +P E Sbjct: 547 MYKRIQKHKSQIDIYIDQLLKDGSFTKDDIDEHRKWVWGMLEDS--FAKSKDYQPTSKE 603 >gi|163738925|ref|ZP_02146338.1| 2-oxoglutarate dehydrogenase, E1 component [Phaeobacter gallaeciensis BS107] gi|161387730|gb|EDQ12086.1| 2-oxoglutarate dehydrogenase, E1 component [Phaeobacter gallaeciensis BS107] Length = 985 Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust. Identities = 46/224 (20%), Positives = 98/224 (43%), Gaps = 11/224 (4%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQ 196 G S+H+ T N H V LG A ++ + S++ + ++ GD A A QG Sbjct: 346 GNSVHLSLTANP---SHLEAVNPVVLGKVRAKQDQLKDSERTKVLPILLHGDAAFAGQGV 402 Query: 197 VYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 V E F ++ L ++++ NNQ T+ + + + + P V+G D Sbjct: 403 VAECFALSGLRGHKAGGTMHIVVNNQIGFTTAPHFSRSSPYPTDNALVVEAPIFHVNGDD 462 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 AV A + + +++++ YR GH+ D + +++ + + Sbjct: 463 PEAVVHAARVATEFRQKFHKDVVLDIFCYRRFGHNEGDEPMFTNPLMYKKIKGHKTTLSL 522 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 +RL+ + EG++++++ + + +N E ++ K P+ A+ Sbjct: 523 YTERLVKDGLIPEGEIEDMKASFQARLNEEFEAGKNFK-PNKAD 565 >gi|148652223|ref|YP_001279316.1| 1-deoxy-D-xylulose-5-phosphate synthase [Psychrobacter sp. PRwf-1] gi|148571307|gb|ABQ93366.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Psychrobacter sp. PRwf-1] Length = 710 Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust. Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 34/250 (13%) Query: 13 IKMALNPSVSAKRAATSSVDCVDI-----PFLEGFEVSEFNKEQELSAYRLMLLIRRFEE 67 + MA++ +V+ K AA + P L+ E LS +L++L E Sbjct: 27 VDMAISDAVAKKPAAMRLFSAIPTTRPTTPLLDSIESPA--DLTPLSQAQLLVLADELRE 84 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASK 124 LY G GG +G + + + L T D+++ ++ + H + Sbjct: 85 YL--LYSAGQSGGHFGANLGVIELTIALHYLLDTPKDKLVWDVGHQAYAHKV-------- 134 Query: 125 IMAELTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSD 180 LTGR+ ++ + K G + Y G+ +S G G++ A ++ +SD Sbjct: 135 ----LTGRRDRLATIRAKQGLTAFPERQESEYDTFGVGHSSTSISAGLGMSLALRHLKSD 190 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 GDGA G +E+ N A + +++ V+ +N ++ S+ FS+ Sbjct: 191 AKVACVIGDGAMTGGMAFEALNDAVQQDADLLVVLNDNDMSISCSIG------GFSRHLA 244 Query: 241 SFNIPGMQVD 250 G QVD Sbjct: 245 MLWESGYQVD 254 >gi|332141297|ref|YP_004427035.1| 2-oxoglutarate dehydrogenase E1 component [Alteromonas macleodii str. 'Deep ecotype'] gi|327551319|gb|AEA98037.1| 2-oxoglutarate dehydrogenase E1 component [Alteromonas macleodii str. 'Deep ecotype'] Length = 939 Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+FN++ V + ++ NNQ TS + + T + + Sbjct: 356 LPITIHGDSAIAGQGVVQETFNMSQTRGFAVGGTVRIVVNNQVGFTTSKTEDTRSTQYCT 415 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+ D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 416 DIAKMVQAPIFHVNSDDPEAVAFVTQLALEYRNKFKKDVVIDLVCYRRHGHNEADEPN 473 >gi|33152413|ref|NP_873766.1| alpha-ketoglutarate decarboxylase [Haemophilus ducreyi 35000HP] gi|33148636|gb|AAP96155.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus ducreyi 35000HP] Length = 953 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 6/118 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + V GD A A QG V E+ N+A V I ++ NNQ TS + T F + Sbjct: 370 LAVSVHGDSAVAGQGVVQETLNMANARGYKVGGSIRIVINNQIGFTTSNPTDTRSTEFCT 429 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 P + V+G D AV AV Y K I I++++YR GH+ +D PA Sbjct: 430 DIAKMIQSPIIHVNGDDPEAVAFAARMAVEYRTLFKRDIFIDLISYRRHGHNEADEPA 487 >gi|303229882|ref|ZP_07316658.1| transketolase, thiamine diphosphate binding domain protein [Veillonella atypica ACS-134-V-Col7a] gi|302515438|gb|EFL57404.1| transketolase, thiamine diphosphate binding domain protein [Veillonella atypica ACS-134-V-Col7a] Length = 278 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 4/130 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K +D GDG +GQV+E+ A + L N+ ++ Sbjct: 121 GSLGQGISAACGMALAGKIDHADYRVYSILGDGELEEGQVWEAAMFAGHYKLNNLTAFVD 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + + + + +F ++V+G +I + +++A A+ GP Sbjct: 181 YNGLQIDGDIEKVMSPLPIPDKFTAFKWNVIEVNGHNIDELHHAIEEAKAFT---DGPTC 237 Query: 277 IEMLTYRYRG 286 I M T + +G Sbjct: 238 IVMHTVKGKG 247 >gi|255947496|ref|XP_002564515.1| Pc22g04770 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591532|emb|CAP97765.1| Pc22g04770 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1060 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 4/116 (3%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE+ +L + I+++ NNQ T + + S Sbjct: 436 VLLHGDAAFAGQGVVYETMGFHSLPAYSTGGTIHLVVNNQIGFTTDPRYSRSTPYCSDIA 495 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 S + P V+ D AV A + K ++I+M+ YR +GH+ +D ++ Sbjct: 496 KSIDAPVFHVNADDAEAVNYVCQVAADWRAEFKRDVVIDMVCYRKQGHNETDQPSF 551 >gi|262371934|ref|ZP_06065213.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter junii SH205] gi|262311959|gb|EEY93044.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter junii SH205] Length = 946 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + V+ GD A A Sbjct: 309 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRKDIGGDDVLPVIVHGDAAFAG 362 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V ++++ NNQ TS R + T + + P V Sbjct: 363 QGVNQETFQMSQTRGYTVGGTVHIVINNQVGFTTSDPRDTRSTEYCTDVAKMIQSPIFHV 422 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +G D AV A + + ++I++ YR RGH+ +D Sbjct: 423 NGDDPEAVIFATQLAHDFRHEFRKDVVIDLFCYRRRGHNEAD 464 >gi|262375855|ref|ZP_06069087.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter lwoffii SH145] gi|262309458|gb|EEY90589.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Acinetobacter lwoffii SH145] Length = 940 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 18/165 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRR-----SDKICVVCFGDGA-AN 193 GG +H+ F H IVG V G A + RR D + ++ GD A A Sbjct: 309 GGEVHL---ALAFNPSHLEIVGPVVE---GSVRARQVRRKDIGGDDVLPLIVHGDAAFAG 362 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQV 249 QG E+F ++ V ++++ NNQ TS R + T + + P V Sbjct: 363 QGVNQETFQMSQTRGYTVGGTVHIVINNQVGFTTSDPRDARSTEYCTDIAKMIQAPIFHV 422 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 +G D AV A + + ++I+M YR RGH+ +D PA Sbjct: 423 NGDDPEAVVFISQLAHDFRHTFRKDVVIDMFCYRRRGHNEADEPA 467 >gi|259415160|ref|ZP_05739082.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Silicibacter sp. TrichCH4B] gi|259349070|gb|EEW60824.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Silicibacter sp. TrichCH4B] Length = 984 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 37/188 (19%), Positives = 83/188 (44%), Gaps = 5/188 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 ++ R+ + ++ GD A A QG V E F ++ L ++++ NNQ T+ + Sbjct: 380 DRAERTAVLPILLHGDAAFAGQGVVAECFALSGLRGHRTGGTMHIVVNNQIGFTTAPHFS 439 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D AV A + + ++I++ YR GH+ Sbjct: 440 RSSPYPTDNALVVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDIFCYRRFGHNE 499 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + +++ + + +RL+ + EG++++++ + +N E ++ Sbjct: 500 GDEPMFTNPLMYKKIKGHKTTLSLYTERLVKDGLIPEGEIEDMKAAFQAHLNEEFETGKT 559 Query: 350 DKEPDPAE 357 K P+ A+ Sbjct: 560 YK-PNKAD 566 >gi|77457841|ref|YP_347346.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas fluorescens Pf0-1] gi|77381844|gb|ABA73357.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas fluorescens Pf0-1] Length = 943 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ ++++ NNQ Sbjct: 338 GSVRARQDRRNDPTGEKVLPISIHGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T ++ P + V+G D AV A+ Y K ++I+ Sbjct: 398 VGFTISNPLDSRSTEYATDVAKMIQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|225569613|ref|ZP_03778638.1| hypothetical protein CLOHYLEM_05707 [Clostridium hylemonae DSM 15053] gi|225161083|gb|EEG73702.1| hypothetical protein CLOHYLEM_05707 [Clostridium hylemonae DSM 15053] Length = 276 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 6/122 (4%) Query: 158 GIVGAQVSLGTGIAFANKYR--RSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G +S G+ A + R +S C++ GDG N+GQ++E+ AA + L N+ + Sbjct: 118 GSLGIGLSAAGGMVLACRLRGLKSRVYCMI--GDGELNEGQIWEAAATAAHYRLDNLTAL 175 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 I+ N + + K+ +F ++DG D A+ + +D A A C+ Sbjct: 176 IDVNGLQNDAETKKVKNMLDIRKKWEAFGWNTTEIDGHDFDAIFSALDAARA-CKGRPTA 234 Query: 275 II 276 +I Sbjct: 235 VI 236 >gi|163741831|ref|ZP_02149221.1| alpha-ketoglutarate decarboxylase [Phaeobacter gallaeciensis 2.10] gi|161385004|gb|EDQ09383.1| alpha-ketoglutarate decarboxylase [Phaeobacter gallaeciensis 2.10] Length = 985 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 46/224 (20%), Positives = 98/224 (43%), Gaps = 11/224 (4%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQ 196 G S+H+ T N H V LG A ++ + S++ + ++ GD A A QG Sbjct: 346 GNSVHLSLTANP---SHLEAVNPVVLGKVRAKQDQLKDSERTKVLPILLHGDAAFAGQGV 402 Query: 197 VYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 V E F ++ L ++++ NNQ T+ + + + + P V+G D Sbjct: 403 VAECFALSGLRGHKAGGTMHIVVNNQIGFTTAPHFSRSSPYPTDNALVVEAPIFHVNGDD 462 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 AV A + + +++++ YR GH+ D + +++ + + Sbjct: 463 PEAVVHAARVATEFRQKFHKDVVLDIFCYRRFGHNEGDEPMFTNPLMYKKIKGHKTTLSL 522 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 +RL+ + EG++++++ + + +N E ++ K P+ A+ Sbjct: 523 YTERLVKDGLIPEGEIEDMKASFQARLNEEFEAGKNFK-PNKAD 565 >gi|115661766|ref|XP_001202413.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115689883|ref|XP_001200674.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 244 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 I V+ GD A QG + E F +A L + V I++I NNQ T R + S Sbjct: 23 INVLLHGDAAFVAQGVIAECFAMANLPHYAVGGSIHLIVNNQIGFTTPSERGRSSPYSSD 82 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 P + V+G D AV + AV+Y + + +++++L +R GH+ + DP+ Sbjct: 83 IAKMNGNPVIHVNGEDPEAVLSACRLAVSYRQKFRKDVVVDLLCFRRWGHNEIDDPS 139 >gi|293606929|ref|ZP_06689276.1| transketolase [Achromobacter piechaudii ATCC 43553] gi|292814661|gb|EFF73795.1| transketolase [Achromobacter piechaudii ATCC 43553] Length = 285 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 1/110 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S G G+A + D V GDG +GQV+E+ AA L+ +I +I+ Sbjct: 125 GSIGHALSNGVGMALGGRMNHRDFNVFVMLGDGEMQEGQVWEAALFAAHNRLSRLIAIID 184 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 N Y + V + ++ +F +VDG ++ + A + + A Sbjct: 185 RNGYQLDGKVDDVVGVESLKEKWQAFGWDVHEVDGHNLHELTALLRRLRA 234 >gi|330890420|gb|EGH23081.1| transketolase [Pseudomonas syringae pv. mori str. 301020] gi|331009121|gb|EGH89177.1| transketolase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 256 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 86/218 (39%), Gaps = 11/218 (5%) Query: 70 GQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIM 126 GQ+ G G VG G L + + E +Q Y GH A + A+ I Sbjct: 2 GQVQGQGYVGQALGAADLLAVSYFHALNYRPEDPEWEQRDRFYLSIGH-YAIALYAALIE 60 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FANKYRRSDKI 182 AE+ + G S S + G I G + G GIA K + S Sbjct: 61 AEIVPLDELETYGSDDSRLPMSGMATYTPGMEITGGSLGHGLGIAVGACLGLKRKASRSF 120 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGV 240 DG N+G +E+ A+ W L N+I +++ NNQ A G S S A R Sbjct: 121 VYNLLSDGELNEGSTWEAAMSASHWKLDNLIAIVDVNNQQADGHS-SEVLAFEPIVDRWQ 179 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +F +VDG D+ A+ A D A + A II + Sbjct: 180 AFGWFTQRVDGNDLNALVAAFDAARQHVGAQPRVIICD 217 >gi|325970350|ref|YP_004246541.1| transketolase [Spirochaeta sp. Buddy] gi|324025588|gb|ADY12347.1| Transketolase [Spirochaeta sp. Buddy] Length = 282 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 17/143 (11%) Query: 149 TKNGFYGGH-------------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG 195 T NG GH G +G +S+ G+A + +S+ GDG +G Sbjct: 98 TFNGMLQGHPDMDRTPGIEAVTGSLGQGLSVSLGMALGLRLDKSENRVYAILGDGELAEG 157 Query: 196 QVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 Q++E+ A+++ N+ +I+ N ++ + N ++ SF +++DG D+ Sbjct: 158 QIWEAVMAASVYKASNLCAIIDWNGVQATSTTAEIFPIANLVEKWKSFGWNVIEIDGHDM 217 Query: 255 RAVKATMDKAVAYCRAHKGPIII 277 + +D A AY GP I Sbjct: 218 VQILKALDAAKAYT---DGPTAI 237 >gi|18978060|ref|NP_579417.1| transketolase N-terminal section [Pyrococcus furiosus DSM 3638] gi|18893849|gb|AAL81812.1| transketolase N-terminal section [Pyrococcus furiosus DSM 3638] Length = 217 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 9/107 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ GIA A K V GDG ++GQ++E+ AA NL NV+ +I+ Sbjct: 95 GSLGQGLSVANGIALAKKMDNKKGRIFVILGDGELDEGQIWEAAMTAAHHNLDNVVAIID 154 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 N + + A+ +++ +F G ++R V+ ++K Sbjct: 155 RNYHQLTGHTEDILAKEPLAEKWKAF--------GWEVREVENNVEK 193 >gi|293604114|ref|ZP_06686522.1| 2-oxoglutarate dehydrogenase E1 component [Achromobacter piechaudii ATCC 43553] gi|292817339|gb|EFF76412.1| 2-oxoglutarate dehydrogenase E1 component [Achromobacter piechaudii ATCC 43553] Length = 955 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 27/179 (15%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A + RR D + V+ GD A A QG V E+ N+A ++++ NNQ Sbjct: 344 ARQERRGDAEGKQVLPVLVHGDAAFAGQGVVMETLNLAQTRGYGTGGTLHIVINNQIGFT 403 Query: 224 TSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 TS R S T + V P V+G D AV A+ Y + I+++++ + Sbjct: 404 TSDPRDSRSTLYCTDVVKMIEAPVFHVNGDDPEAVVFVTKLALDYRLQFRHDIVVDIVCF 463 Query: 283 RYRGH------SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 R GH S++ P Y+ R H P ++L +K ++G L E E + Sbjct: 464 RKLGHNEQDTPSLTQPLMYK--------RIGHHP---GTRKLYADKLTTQGVLAEGEAD 511 >gi|52784315|ref|YP_090144.1| hypothetical protein BLi00495 [Bacillus licheniformis ATCC 14580] gi|319648753|ref|ZP_08002964.1| transketolase [Bacillus sp. BT1B_CT2] gi|52346817|gb|AAU39451.1| putative protein [Bacillus licheniformis ATCC 14580] gi|317389172|gb|EFV69988.1| transketolase [Bacillus sp. BT1B_CT2] Length = 281 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 8/152 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV-IE 216 G +G +S G+A ++K V GDG N+GQ +E+ AA L +YV ++ Sbjct: 118 GSLGQGISAAAGVALSHKLSGRANRTFVIVGDGELNEGQCWEAIQFAAHHKLRNLYVFVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + +F + +F +V+G + A+ + + A + P+ Sbjct: 178 DNKQQLDGPTKEIIDPLDFVSKFRAFGFYSERVNGHEPEAIYRAVKRGEA---QRERPVA 234 Query: 277 IEMLTYRYRG----HSMSDPANYRTREEINEM 304 + + T + +G M + + R EE N M Sbjct: 235 VILDTVKGKGIPYFEKMENSHHIRANEEQNRM 266 >gi|206890595|ref|YP_002249316.1| transketolase subunit A [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742533|gb|ACI21590.1| transketolase subunit A [Thermodesulfovibrio yellowstonii DSM 11347] Length = 265 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 1/105 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G + ANK D V GDG N+G V+E+ A+ L N+ +++ Sbjct: 112 GSLGHGLSIGVGFSIANKIDNLDSHVYVLCGDGELNEGSVWEAIMFASHKKLNNLTLIVD 171 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 N+ + + ++FN ++++G D + ++ + Sbjct: 172 YNKLQAFGKTNEVVNLEPLKDKFLAFNWYAIEINGHDFKEIEKAL 216 >gi|116670350|ref|YP_831283.1| transketolase subunit A [Arthrobacter sp. FB24] gi|116610459|gb|ABK03183.1| transketolase subunit A [Arthrobacter sp. FB24] Length = 297 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 12/145 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A A K +D V GDG +G V+E+ + + L N+ V++ Sbjct: 123 GSLGQGLSAGAGMALAAKRLGADFHTWVMLGDGELEEGMVWEAVHTCRRFKLDNLTAVVD 182 Query: 217 NN---QYAM-----GTSVSRASAQTNFSKRGV--SFNIPGMQVDGMDIRAVKATMDKAVA 266 N QY G R++ GV SF + +DG D ++A D+ V Sbjct: 183 LNGLQQYGWPVSEEGDRFDRSNPWAGVDLTGVFSSFGWNVINIDGHDFDEIQAAFDR-VR 241 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSD 291 R P +I T + +G S ++ Sbjct: 242 ELRGSDKPTVILAKTTKGKGVSFAE 266 >gi|258651662|ref|YP_003200818.1| alpha-ketoglutarate decarboxylase [Nakamurella multipartita DSM 44233] gi|258554887|gb|ACV77829.1| 2-oxoglutarate dehydrogenase, E1 subunit [Nakamurella multipartita DSM 44233] Length = 1313 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 12/185 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A A QG V E+ N++ L ++VI NNQ T+ + + + Sbjct: 735 MPIAIHGDAAFAGQGVVAETLNLSLLRGYRTGGTMHVIINNQVGFTTAPESSRSSEYCTD 794 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV Y + ++I+M+ YR RGH SM++ Sbjct: 795 VAKMIQAPIFHVNGDDPEAAVWVARLAVEYRQTFGRDVVIDMVCYRRRGHNEGDDPSMTN 854 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 P Y+ + +R + E + R +E L++ + ++ N E ++ Sbjct: 855 PLMYQIIDGKRSVRRIY--TEALIGRGDITPEDAEEALRDYHTQLERVFNEVRELERAVV 912 Query: 352 EPDPA 356 P P+ Sbjct: 913 APSPS 917 >gi|313747571|ref|NP_001186473.1| 2-oxoglutarate dehydrogenase-like, mitochondrial [Gallus gallus] Length = 1005 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + + D A A QG VYE+F+++ L + I+V+ NNQ Sbjct: 372 AEQFYRGDTAGKKVMSIFLHADAAFAGQGVVYETFHLSDLPSYTTNGTIHVVVNNQIGFT 431 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 432 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVMYVCSVAAEWRNTFNKDVVVDLVCYR 491 Query: 284 YRGHS-MSDP 292 RGH+ M +P Sbjct: 492 RRGHNEMDEP 501 >gi|239826425|ref|YP_002949049.1| 2-oxoglutarate dehydrogenase E1 component [Geobacillus sp. WCH70] gi|259515357|sp|C5D802|ODO1_GEOSW RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|239806718|gb|ACS23783.1| 2-oxoglutarate dehydrogenase, E1 subunit [Geobacillus sp. WCH70] Length = 952 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 ++ GD A QG V E+ N++ L I++I NN T + + S Sbjct: 364 FAIMIHGDAAFPGQGIVAETLNLSRLQGYQTGGSIHIIANNMIGFTTESYDSRSTKYASD 423 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 F IP + V+ D A A + A AY + K +I+++ YR GH+ M +P Sbjct: 424 IAKGFEIPIVHVNADDPEACLAAANLAFAYRKRFKKDFVIDLIGYRRFGHNEMDEP 479 >gi|124003550|ref|ZP_01688399.1| 2-oxoglutarate dehydrogenase, E1 component [Microscilla marina ATCC 23134] gi|123991119|gb|EAY30571.1| 2-oxoglutarate dehydrogenase, E1 component [Microscilla marina ATCC 23134] Length = 918 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 16/173 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG VYE ++ L + I+ + NNQ T+ A + + Sbjct: 339 LPVLIHGDAAIAGQGLVYEITQMSKLEGYHTGGTIHFVINNQVGFTTNFEDARSSIYCTD 398 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P + V+G D AV A + I I+++ YR GH+ SD + T Sbjct: 399 VAKMTDSPVLHVNGDDPEAVVFCCRLAAEFREKFNRDIFIDLVCYRKHGHNESDEPKF-T 457 Query: 298 REEINEMRSNH-DPIEQVRKRLLHNKWASEGDL-----KEIEMNVRKIINNSV 344 + + ++ S H +P E RL GDL KE+E ++++ + + Sbjct: 458 QPALYKLISKHPNPRELYLSRL-----KESGDLDASIAKEMEQEFKQMLQDRL 505 >gi|119963962|ref|YP_948353.1| alpha-ketoglutarate decarboxylase [Arthrobacter aurescens TC1] gi|119950821|gb|ABM09732.1| 2-oxoglutarate dehydrogenase, E1 component [Arthrobacter aurescens TC1] Length = 1281 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 10/134 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N++ L I+VI NNQ T+ S + + T + Sbjct: 692 LPIMVHGDAAFAGQGVVAETLNLSQLRGYRTGGTIHVIVNNQVGFTTAPSSSRSSTYSTD 751 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D AV A + + ++I+M+ YR RGH SM+ Sbjct: 752 VAKMIQAPVFHVNGDDPEAVVRVAQLAYEFRQRFHKDVVIDMVCYRRRGHNEGDDPSMTQ 811 Query: 292 PANYRTREEINEMR 305 P Y E +R Sbjct: 812 PLMYNLIEAKRSVR 825 >gi|307330928|ref|ZP_07610061.1| 2-oxoglutarate dehydrogenase, E1 subunit [Streptomyces violaceusniger Tu 4113] gi|306883469|gb|EFN14522.1| 2-oxoglutarate dehydrogenase, E1 subunit [Streptomyces violaceusniger Tu 4113] Length = 1156 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++++ NNQ +G + + A+++++ Sbjct: 571 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHIVINNQ--VGFTAAPAASRSSMYA 628 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ +D Sbjct: 629 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNETD 684 >gi|307130470|ref|YP_003882486.1| transketolase, N-terminal section [Dickeya dadantii 3937] gi|306527999|gb|ADM97929.1| Transketolase, N-terminal section [Dickeya dadantii 3937] Length = 282 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 20/271 (7%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI--- 115 IRR+ + G++ G G +G G+ + A + + E + HGH Sbjct: 16 IRRYALRMGEVQGQGYIGQALGYADVLATAFAHTMNYRPEEPEWENRDRFLLSHGHYAIA 75 Query: 116 -LACGVDASKI-MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 A ++A I EL S+ M ++ GG +G +S+ G+A Sbjct: 76 YYAALIEAGIIPQEELETYGSDDSRLPMSGMATYTPAMEISGGS--LGQGLSIAVGMALG 133 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASA 231 + ++S + + DG ++G +E+ AA + L N+I +++ N Q A G S++ Sbjct: 134 LRQKQSTSLVINSMSDGELDEGSTWEAAMSAAHYGLSNLINIVDINRQQADGNSINILGF 193 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + + SF +VDG D+ AV D A + K P +I T +G Sbjct: 194 EP-LHDKWASFGWYVQRVDGNDVPAVVNAFDNAKNH--PEKQPRVILCDTLMGKGVPF-- 248 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 TR++ + +R + D +Q L NK Sbjct: 249 ---LETRDKNHFIRVDADEWQQAIAVLDANK 276 >gi|297202338|ref|ZP_06919735.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Streptomyces sviceus ATCC 29083] gi|297148091|gb|EDY54176.2| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Streptomyces sviceus ATCC 29083] Length = 1247 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++++ NNQ +G + + S++++ Sbjct: 661 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHIVINNQ--VGFTAAPESSRSSMYA 718 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD Sbjct: 719 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESD 774 >gi|312070349|ref|XP_003138105.1| 2-oxoglutarate dehydrogenase E1 component [Loa loa] gi|307766729|gb|EFO25963.1| 2-oxoglutarate dehydrogenase E1 component [Loa loa] Length = 999 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 5/161 (3%) Query: 171 AFANKYRRSDK-ICVVCFGDGA-ANQGQVYESFNI---AALWNLNVIYVIENNQYAMGTS 225 +F N D+ + ++ GD A + QG V E+FN+ A I+++ NNQ T Sbjct: 362 SFYNGDENGDRTMAILLHGDAAFSGQGVVMETFNLNDLKAYTTHGTIHLVVNNQIGFTTD 421 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + + G P V+ D AV + A + R K +II+++ YR Sbjct: 422 PRCSRSSPYCTDIGRVVGCPIFHVNSDDPEAVMHVCNVAADWRRTFKKDVIIDLVCYRRY 481 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASE 326 GH+ D + +R + +K++L ASE Sbjct: 482 GHNELDEPMFTQPLMYQRIRKTKPVLSIYQKQILAENVASE 522 >gi|82947901|dbj|BAE52765.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzyme [Magnetospirillum magneticum AMB-1] Length = 861 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 10/129 (7%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E+ ++ L +++I NNQ T+ + + Sbjct: 245 RKRVMGIILHGDAAFAGQGVVPETMLLSQLKGYATGGTMHIIINNQIGFTTAPQYSRSGP 304 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-- 291 + S F P V+G D AV A Y + ++I+M+ YR GH+ SD Sbjct: 305 HSSDVAKGFQAPVFHVNGDDPEAVVHVARIATEYRQEFGADVVIDMVCYRRHGHNESDEP 364 Query: 292 ----PANYR 296 P YR Sbjct: 365 AFTQPQMYR 373 >gi|261368526|ref|ZP_05981409.1| transketolase, N-subunit [Subdoligranulum variabile DSM 15176] gi|282569408|gb|EFB74943.1| transketolase, N-subunit [Subdoligranulum variabile DSM 15176] Length = 283 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 7/134 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICV-VCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G VS G+A A KY D + V GDG +G+V+E+F AA + L N+ +I Sbjct: 118 GSLGQGVSCAAGMAKAAKYLHKDDVRVYALLGDGEIEEGEVWEAFLFAAKYKLDNLCVII 177 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 + N + + F + +DG D M+ A Y G P Sbjct: 178 DLNGLQIDGPTKEVMPTDPVDAKMRDFGFRTVSIDGHDF----VQMEDAFQYFHRQTGAP 233 Query: 275 IIIEMLTYRYRGHS 288 I M T + +G S Sbjct: 234 TAILMHTTKGKGVS 247 >gi|239928975|ref|ZP_04685928.1| alpha-ketoglutarate decarboxylase [Streptomyces ghanaensis ATCC 14672] Length = 1160 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++++ NNQ +G + + S++++ Sbjct: 575 LPVAIHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHIVINNQ--VGFTAAPESSRSSMYA 632 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD PA Sbjct: 633 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESDNPA 691 >gi|52078940|ref|YP_077731.1| transketolase [Bacillus licheniformis ATCC 14580] gi|52002151|gb|AAU22093.1| transketolase [Bacillus licheniformis ATCC 14580] Length = 280 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 8/152 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV-IE 216 G +G +S G+A ++K V GDG N+GQ +E+ AA L +YV ++ Sbjct: 117 GSLGQGISAAAGVALSHKLSGRANRTFVIVGDGELNEGQCWEAIQFAAHHKLRNLYVFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + +F + +F +V+G + A+ + + A + P+ Sbjct: 177 DNKQQLDGPTKEIIDPLDFVSKFRAFGFYSERVNGHEPEAIYRAVKRGEA---QRERPVA 233 Query: 277 IEMLTYRYRG----HSMSDPANYRTREEINEM 304 + + T + +G M + + R EE N M Sbjct: 234 VILDTVKGKGIPYFEKMENSHHIRANEEQNRM 265 >gi|300933589|ref|ZP_07148845.1| alpha-ketoglutarate decarboxylase [Corynebacterium resistens DSM 45100] Length = 1232 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 10/137 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A G V E+ N+ L +V ++++ NNQ T+ + + Sbjct: 649 MPVLLHGDAAFAGLGVVQETINLFKLDAYSVGGTVHIVVNNQIGFTTTPDAGRSTHYATD 708 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 F+ P V+G D A AV Y + I+++TYR RGH SM+ Sbjct: 709 LAKGFDCPVFHVNGDDPEACVWVAQLAVDYRNRFGKDVFIDLVTYRRRGHNEADDPSMTQ 768 Query: 292 PANYRTREEINEMRSNH 308 P Y E+ R+ + Sbjct: 769 PLMYDIIGELPTSRAQY 785 >gi|256822985|ref|YP_003146948.1| transketolase central region [Kangiella koreensis DSM 16069] gi|256796524|gb|ACV27180.1| Transketolase central region [Kangiella koreensis DSM 16069] Length = 745 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 21/229 (9%) Query: 124 KIMAELTGRQGGISKGKG---GSMHMF-STKNGFYGGH--GIVGAQVSLGTGIAFANKYR 177 +I++ + ++ IS+G+ GS +F + H +GA SLG A N + Sbjct: 117 QILSLVAAKEDPISQGRHKVFGSAPLFVPPQTSTIASHLPKAMGAAWSLGR--AERNNFD 174 Query: 178 RS---DKICVVCFGDGAANQGQVYESFNIAALWN-----LNVIYVIENNQYAMGTSVSRA 229 D + + FGD + N + N A + L ++Y+ E+N + S Sbjct: 175 AKIPGDSVILCNFGDASFNHATAQSALNTAQYLSYKGEPLPLVYICEDNGIGISVSTPPN 234 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + N R IP +G+ + V +A R + P+ + M T R GH+ Sbjct: 235 WVENNVKNRHSIEYIP---CNGLHLPDVYLAALEAEEIARYERRPVFLHMKTVRLMGHAG 291 Query: 290 SDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 +D + Y + E+I + + DP+ + + + S D+ ++ N R Sbjct: 292 NDTESIYHSIEQIEQTEA-QDPLLHSARICIEAGYLSTEDVLDMYENTR 339 >gi|149021047|gb|EDL78654.1| rCG55740 [Rattus norvegicus] Length = 283 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + I++I NNQ T R + S Sbjct: 129 ICLQVHGDASFCGQGIVLETFTLSNLPHFRIGGSIHLIVNNQLGYTTPAERGRSSLYSSD 188 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 G + V+G V A Y R + +II++L YR GH+ D Sbjct: 189 IGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIIDLLCYRQWGHNELD 242 >gi|294085401|ref|YP_003552161.1| 2-oxoglutarate dehydrogenase, E1 component [Candidatus Puniceispirillum marinum IMCC1322] gi|292664976|gb|ADE40077.1| 2-oxoglutarate dehydrogenase, E1 component [Candidatus Puniceispirillum marinum IMCC1322] Length = 977 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 5/125 (4%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 + + R++ + ++ GD A A QG V E+F + L I++I NNQ TS S + Sbjct: 370 DDHDRTEVLGILLHGDAAFAGQGVVGETFAFSDLRGYRTGGTIHIIVNNQIGFTTSPSYS 429 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + P V+G D AV T A+ + +A ++I+M YR GH+ Sbjct: 430 RSSPYPTDVAKMVMAPIFHVNGDDPEAVVHTARIAIEFRQAFNTDVVIDMFCYRRFGHNE 489 Query: 290 SD-PA 293 D PA Sbjct: 490 GDEPA 494 >gi|302554100|ref|ZP_07306442.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Streptomyces viridochromogenes DSM 40736] gi|302471718|gb|EFL34811.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Streptomyces viridochromogenes DSM 40736] Length = 1116 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++++ NNQ +G + + S++++ Sbjct: 531 LPVAIHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHIVINNQ--VGFTAAPESSRSSMYA 588 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD Sbjct: 589 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESD 644 >gi|228476096|ref|ZP_04060804.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus hominis SK119] gi|228269919|gb|EEK11399.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus hominis SK119] Length = 935 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N++ L + +++I NN+ T + T S Sbjct: 352 MPIIIHGDAAYPGQGINFETMNLSNLDGYSTGGSLHIITNNRIGFTTEPIDGRSTTYSSD 411 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P + V+ D+ A +D A+ + + +I+++ YR GH+ D + Sbjct: 412 IAKGYDVPILHVNADDVEATIEAIDIAMEFRKEFHKDFVIDLVGYRRYGHNEMDEPSITN 471 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 + +R HD +E + NK EG L + +M+ Sbjct: 472 PTLYHNIRK-HDSVEVIYG----NKLVDEGILTKEQMS 504 >gi|257466842|ref|ZP_05631153.1| transketolase subunit A [Fusobacterium gonidiaformans ATCC 25563] gi|315917990|ref|ZP_07914230.1| transketolase subunit A [Fusobacterium gonidiaformans ATCC 25563] gi|313691865|gb|EFS28700.1| transketolase subunit A [Fusobacterium gonidiaformans ATCC 25563] Length = 270 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + D V GDG +GQ++E+ AA + L NV ++ Sbjct: 116 GSLGQGLSVANGMALNAKIFKEDYRVYVMIGDGELQEGQIWEAAMTAAHYKLDNVCAFVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N + +V K+ +F + +DG + + + ++ A A C+ P + Sbjct: 176 SNNLQIDGNVDAVMGVEPLDKKWEAFGWNVLSIDGHNFEEIFSALEAAKA-CKGK--PTL 232 Query: 277 IEMLTYRYRGHSM 289 I T + +G S Sbjct: 233 ILAKTVKGKGVSF 245 >gi|282600838|ref|ZP_05979842.2| 1-deoxy-D-xylulose-5-phosphate synthase [Subdoligranulum variabile DSM 15176] gi|282571077|gb|EFB76612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Subdoligranulum variabile DSM 15176] Length = 624 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 9/106 (8%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTK----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G + + K G + K + F GHG A +S GIA A K ++ Sbjct: 83 LTGRRNGFAALRQKEGISGFPNPKESDCDTFVAGHG--SAALSTAIGIARAKKIKQEPGK 140 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 VV GDGA G VYE N + N N+I ++ +N+ ++ +V + Sbjct: 141 VVVIVGDGAFTGGMVYEGMNNVSKLN-NLIVILNDNKMSISKNVGQ 185 >gi|148287022|ref|NP_083203.2| transketolase-like protein 2 [Mus musculus] gi|124297863|gb|AAI32111.1| Transketolase-like 2 [Mus musculus] gi|124376688|gb|AAI32299.1| Transketolase-like 2 [Mus musculus] Length = 627 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+ A+ +NL N++ + Sbjct: 125 GSLGQGLGAACGMAYTGKYFDKASYRVFCLMGDGESSEGSVWEALAFASHYNLDNLVAIF 184 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + + KR +F VDG D+ A+ KA + P Sbjct: 185 DVNRLGQSGTAPLEHCTAVYEKRCQAFGWNTYVVDGHDVEALCQAFWKAA---QVKNKPT 241 Query: 276 IIEMLTYRYRG-HSMSDPANY 295 + T++ RG ++ D N+ Sbjct: 242 ALIAKTFKGRGIPNVEDAENW 262 >gi|29829514|ref|NP_824148.1| alpha-ketoglutarate decarboxylase [Streptomyces avermitilis MA-4680] gi|29606622|dbj|BAC70683.1| putative 2-oxoglutarate dehydrogenase [Streptomyces avermitilis MA-4680] Length = 1276 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++++ NNQ +G + + S++++ Sbjct: 686 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHIVINNQ--VGFTAAPESSRSSMYA 743 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD Sbjct: 744 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESD 799 >gi|81905123|sp|Q9D4D4|TKTL2_MOUSE RecName: Full=Transketolase-like protein 2 gi|12855432|dbj|BAB30335.1| unnamed protein product [Mus musculus] Length = 627 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+ A+ +NL N++ + Sbjct: 125 GSLGQGLGAACGMAYTGKYFDKASYRVFCLMGDGESSEGSVWEALAFASHYNLDNLVAIF 184 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + + KR +F VDG D+ A+ KA + P Sbjct: 185 DVNRLGQSGTAPLEHCTAVYEKRCQAFGWNTYVVDGHDVEALCQAFWKAA---QVKNKPT 241 Query: 276 IIEMLTYRYRG-HSMSDPANY 295 + T++ RG ++ D N+ Sbjct: 242 ALIAKTFKGRGIPNVEDAENW 262 >gi|314936442|ref|ZP_07843789.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus hominis subsp. hominis C80] gi|313655061|gb|EFS18806.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Staphylococcus hominis subsp. hominis C80] Length = 935 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N++ L + +++I NN+ T + T S Sbjct: 352 MPIIIHGDAAYPGQGINFETMNLSNLDGYSTGGALHIITNNRIGFTTEPIDGRSTTYSSD 411 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P + V+ D+ A +D A+ + + +I+++ YR GH+ D + Sbjct: 412 IAKGYDVPILHVNADDVEATIEAIDIAMEFRKEFHKDFVIDLVGYRRYGHNEMDEPSITN 471 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 + +R HD +E + NK EG L + +M+ Sbjct: 472 PTLYHNIRK-HDSVEVIYG----NKLVDEGILTKEQMS 504 >gi|291437312|ref|ZP_06576702.1| alpha-ketoglutarate decarboxylase [Streptomyces ghanaensis ATCC 14672] gi|291340207|gb|EFE67163.1| alpha-ketoglutarate decarboxylase [Streptomyces ghanaensis ATCC 14672] Length = 1117 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++++ NNQ +G + + S++++ Sbjct: 532 LPVAIHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHIVINNQ--VGFTAAPESSRSSMYA 589 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD PA Sbjct: 590 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESDNPA 648 >gi|290957458|ref|YP_003488640.1| 2-oxoglutarate dehydrogenase [Streptomyces scabiei 87.22] gi|260646984|emb|CBG70083.1| putative 2-oxoglutarate dehydrogenase [Streptomyces scabiei 87.22] Length = 1253 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++++ NNQ +G + + S++++ Sbjct: 667 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHIVINNQ--VGFTAAPESSRSSMYA 724 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD Sbjct: 725 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESD 780 >gi|300781481|ref|ZP_07091335.1| 2-oxoglutarate dehydrogenase E1 component [Corynebacterium genitalium ATCC 33030] gi|300533188|gb|EFK54249.1| 2-oxoglutarate dehydrogenase E1 component [Corynebacterium genitalium ATCC 33030] Length = 1284 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD + G V E+ N++ L +V ++++ NNQ T+ + + + Sbjct: 694 VPMMLHGDASFTGLGVVQETLNMSKLTGYDVGGTVHIVVNNQVGFTTTPDQGRSTYYATD 753 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 F+ P V+G D A A Y R + I+++ YR RGH+ +D Sbjct: 754 LAKGFDCPVFHVNGDDPEAAAWVGQLATEYRREFGKDVFIDLICYRLRGHNEAD 807 >gi|182436019|ref|YP_001823738.1| alpha-ketoglutarate decarboxylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464535|dbj|BAG19055.1| putative 2-oxoglutarate dehydrogenase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 1267 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + + S++++ Sbjct: 682 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAAPESSRSSMYA 739 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P + V+G D AV A + +A ++I+++ YR RGH+ +D Sbjct: 740 TDVARMIEAPIIHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNETD 795 >gi|94499002|ref|ZP_01305540.1| 2-oxoglutarate dehydrogenase, E1 component [Oceanobacter sp. RED65] gi|94428634|gb|EAT13606.1| 2-oxoglutarate dehydrogenase, E1 component [Oceanobacter sp. RED65] Length = 943 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDKI-----CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + V GD A A QG V E+ ++ I+++ NNQ Sbjct: 338 GSVRARQDRRNDPVGDTVVPVNIHGDSAFAGQGVVMETLQMSQTRGYKTGGTIHIVVNNQ 397 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS T + + P + V+G D AV AV Y K ++I+ Sbjct: 398 VGFTTSKREDVRSTEYCTDVAKMVQAPILHVNGDDPEAVLFVTQLAVDYRNEFKKDVVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|52840776|ref|YP_094575.1| 2-oxoglutarate dehydrogenase E1 component [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627887|gb|AAU26628.1| 2-oxoglutarate dehydrogenase E1 component) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 944 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 14/164 (8%) Query: 159 IVGAQV--SLGTGIAFANKYRRSDKIC-VVCFGDGA-ANQGQVYESFNIAALWNL---NV 211 I+G V S+ + + N + DK+ +V GD A A QG V E+FN + Sbjct: 331 IIGPVVEGSVRSRLGRRNDLAKKDKVVPIVIHGDAAFAGQGVVMETFNFSQARGYCTGGT 390 Query: 212 IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 I+++ NNQ TS + T + + P + V+G D AV A + Sbjct: 391 IHIVINNQIGFTTSNPLDARSTLYCTDVAKMVQAPVIHVNGDDPEAVVFATQVAFDFRMK 450 Query: 271 HKGPIIIEMLTYRYRGH------SMSDPANYRTREEINEMRSNH 308 K I+I+++ YR GH S++ P Y+ + + +R + Sbjct: 451 FKRDIVIDLVCYRRHGHNEADEPSVTQPKMYKKIKSMPTLREKY 494 >gi|15614769|ref|NP_243072.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus halodurans C-125] gi|81786660|sp|Q9KAT1|ODO1_BACHD RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|10174825|dbj|BAB05925.1| oxoglutarate dehydrogenase [Bacillus halodurans C-125] Length = 945 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 5/116 (4%) Query: 183 CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ GD A QG V E+ N++ L +++I NN T + + S Sbjct: 359 SILIHGDAAFPGQGVVTETLNLSRLTGYQTGGSLHIIANNNIGFTTETFDSRSTLYSSDP 418 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 F IP + V+ D A A + A Y + K +I+++ YR GH+ M +PA Sbjct: 419 AKGFEIPIVHVNADDPEACLAAVHLAFQYRKRFKKDFLIDLIGYRRFGHNEMDEPA 474 >gi|257452792|ref|ZP_05618091.1| transketolase subunit A [Fusobacterium sp. 3_1_5R] gi|317059333|ref|ZP_07923818.1| transketolase subunit A [Fusobacterium sp. 3_1_5R] gi|313685009|gb|EFS21844.1| transketolase subunit A [Fusobacterium sp. 3_1_5R] Length = 270 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + D V GDG +GQ++E+ AA + L NV ++ Sbjct: 116 GSLGQGLSVANGMALNAKIFKEDYRVYVMIGDGELQEGQIWEAAMTAAHYKLDNVCAFVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N + +V K+ +F + +DG + + + ++ A A C+ P + Sbjct: 176 SNNLQIDGNVDAVMGVEPLDKKWEAFGWNVLSIDGHNFEEIFSALEAAKA-CKGK--PTL 232 Query: 277 IEMLTYRYRGHSM 289 I T + +G S Sbjct: 233 ILAKTVKGKGVSF 245 >gi|307609339|emb|CBW98824.1| 2-oxoglutarate dehydrogenase, E1 subunit [Legionella pneumophila 130b] Length = 936 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 14/164 (8%) Query: 159 IVGAQV--SLGTGIAFANKYRRSDKIC-VVCFGDGA-ANQGQVYESFNIAALWNL---NV 211 I+G V S+ + + N + DK+ +V GD A A QG V E+FN + Sbjct: 323 IIGPVVEGSVRSRLGRRNDLAKKDKVVPIVIHGDAAFAGQGVVMETFNFSQARGYCTGGT 382 Query: 212 IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 I+++ NNQ TS + T + + P + V+G D AV A + Sbjct: 383 IHIVINNQIGFTTSNPLDARSTLYCTDVAKMVQAPVIHVNGDDPEAVVFATQVAFDFRMK 442 Query: 271 HKGPIIIEMLTYRYRGH------SMSDPANYRTREEINEMRSNH 308 K I+I+++ YR GH S++ P Y+ + + +R + Sbjct: 443 FKRDIVIDLVCYRRHGHNEADEPSVTQPKMYKKIKSMPTLREKY 486 >gi|242278216|ref|YP_002990345.1| deoxyxylulose-5-phosphate synthase [Desulfovibrio salexigens DSM 2638] gi|242121110|gb|ACS78806.1| deoxyxylulose-5-phosphate synthase [Desulfovibrio salexigens DSM 2638] Length = 672 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 41/210 (19%), Positives = 78/210 (37%), Gaps = 54/210 (25%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ H K+G G G G +S G+A A+ ++ C Sbjct: 125 ILTGRYNEFHTLRQKDGISGFPRMAENTYDHFGVGHSSTSISAALGMAVASDLEGDNRNC 184 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN--------- 234 V GDG+ GQ +E N A ++ ++ +N+ ++ T+V SA + Sbjct: 185 VAVIGDGSMTAGQAFEGLNQAGGMKRKMVVILNDNEMSISTNVGALSAFLSRKLSHPVMN 244 Query: 235 ----------------------FSKRG----VSFNIPGMQVDGMDIRAVKAT-------M 261 ++KRG SF PGM + +D + + Sbjct: 245 RFKKDFESILKQIPKIGDDLAMYAKRGEDSFKSFFTPGMLFESLDFTYLGPIDGHNLNEL 304 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + + GP+++ +LT + +G++ ++ Sbjct: 305 VDVLEQVKKMDGPVLVHVLTKKGKGYTPAE 334 >gi|156550408|ref|XP_001600105.1| PREDICTED: similar to transketolase [Nasonia vitripennis] Length = 627 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 2/99 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S+ G+A+ KY C GDG + +G ++E+ + A+ +NL N+ + Sbjct: 123 GSLGQGLSVAAGMAYVGKYFDKASYRTYCLIGDGESAEGSIWEALHFASFYNLDNLCAIF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + N+ S + KR +F + VDG D+ Sbjct: 183 DVNRLGQSEPTSLQHNMEVYRKRLEAFGFNALVVDGHDV 221 >gi|83944769|ref|ZP_00957135.1| 2-oxoglutarate dehydrogenase, E1 component [Oceanicaulis alexandrii HTCC2633] gi|83851551|gb|EAP89406.1| 2-oxoglutarate dehydrogenase, E1 component [Oceanicaulis alexandrii HTCC2633] Length = 996 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 48/222 (21%), Positives = 86/222 (38%), Gaps = 16/222 (7%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK---------ICVVCFGDGA 191 G +H+ T N H V LG A ++RR + + ++ GD A Sbjct: 342 GNKVHLSLTANP---SHLEAVNPVVLGKARAKQTQFRRDEGDGSNYAEKVLPLLLHGDAA 398 Query: 192 -ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 A QG V E F ++ L I+ + NNQ T + + S + P Sbjct: 399 FAGQGVVAECFGLSGLRGHRTGGAIHFVVNNQIGFTTDPKDSRSSPYPSDVALMVQSPIF 458 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSN 307 V+G D AV A Y + ++++M YR GH+ D ++ + + Sbjct: 459 HVNGDDPEAVTFATKVAAEYRQRFGKDVVVDMFCYRRYGHNEGDDPSFTQPIMYKTIAKH 518 Query: 308 HDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 +EQ +RL+ ++ ++ + +++ E A+S Sbjct: 519 PTTLEQYGERLIKEGVVTQDEIDGWVEEFAQFLDDEFEKAKS 560 >gi|294631357|ref|ZP_06709917.1| oxoglutarate dehydrogenase [Streptomyces sp. e14] gi|292834690|gb|EFF93039.1| oxoglutarate dehydrogenase [Streptomyces sp. e14] Length = 1206 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++++ NNQ +G + + S++++ Sbjct: 519 LPVAIHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHIVINNQ--VGFTAAPESSRSSMYA 576 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD Sbjct: 577 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESD 632 >gi|210623128|ref|ZP_03293594.1| hypothetical protein CLOHIR_01544 [Clostridium hiranonis DSM 13275] gi|210153805|gb|EEA84811.1| hypothetical protein CLOHIR_01544 [Clostridium hiranonis DSM 13275] Length = 273 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 7/144 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +G ++E+ AA + L N+I ++ Sbjct: 115 GSLGQGLSAANGMALAAKLDGKDYNVYALLGDGEVQEGMIWEAAMSAAHYKLDNIIAFLD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + S + +K+ +F + +DG D +K KA+ + +G P Sbjct: 175 HNGLQIDGSNDEVMSLGKIAKKFDAFGWNVISIDGHDFDQIK----KAIEMAKEEEGRPS 230 Query: 276 IIEMLTYRYRGHS-MSDPANYRTR 298 I+ T + +G S M D A + + Sbjct: 231 IVICETVKGKGVSFMEDQAGWHGK 254 >gi|78224018|ref|YP_385765.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens GS-15] gi|118595485|sp|Q39RT4|DXS2_GEOMG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName: Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP synthase 2; Short=DXPS 2 gi|78195273|gb|ABB33040.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens GS-15] Length = 635 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 14/115 (12%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A + S + GDG+ G YE+ N A Sbjct: 107 SPHDAFGAGHS--STSISAGLGMAAAQDLKGSGSRAIAVIGDGSLTGGMAYEALNQAGHL 164 Query: 208 NLNVIYVIENNQY-------AMGTSVSRASAQTNFSK-----RGVSFNIPGMQVD 250 N+I V+ +N+ A + VSR ++F K +G+ NIP + D Sbjct: 165 KKNLIVVLNDNEMSISQNVGAFSSFVSRKMTGSDFRKLKKEMQGLLENIPAIGKD 219 >gi|302542581|ref|ZP_07294923.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Streptomyces hygroscopicus ATCC 53653] gi|302460199|gb|EFL23292.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Streptomyces himastatinicus ATCC 53653] Length = 1278 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++++ NNQ +G + + A+++++ Sbjct: 696 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHIVINNQ--VGFTAAPAASRSSMYA 753 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ +D Sbjct: 754 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNETD 809 >gi|154483133|ref|ZP_02025581.1| hypothetical protein EUBVEN_00834 [Eubacterium ventriosum ATCC 27560] gi|149735941|gb|EDM51827.1| hypothetical protein EUBVEN_00834 [Eubacterium ventriosum ATCC 27560] Length = 278 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A K + D GDG ++GQV+E+ A+ L N+ +++ Sbjct: 115 GSLGQGISAAVGMALGGKLKNKDYRVYTLVGDGEIDEGQVWEALMFASHRKLDNLCVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + ++ ++ SF ++ DG + +++KA + KG P Sbjct: 175 NNGLQLDGTIDEIIGPNPLDEKFESFGCHVIKADGHNFD----SLEKAFNEAKTVKGQPT 230 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 231 VIIAKTVKGKGVSF 244 >gi|54293527|ref|YP_125942.1| alpha-ketoglutarate decarboxylase [Legionella pneumophila str. Lens] gi|53753359|emb|CAH14809.1| 2-oxoglutarate dehydrogenase, E1 subunit [Legionella pneumophila str. Lens] Length = 936 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 14/164 (8%) Query: 159 IVGAQV--SLGTGIAFANKYRRSDKIC-VVCFGDGA-ANQGQVYESFNIAALWNL---NV 211 I+G V S+ + + N + DK+ +V GD A A QG V E+FN + Sbjct: 323 IIGPVVEGSVRSRLGRRNDLAKKDKVVPIVIHGDAAFAGQGVVMETFNFSQARGYCTGGT 382 Query: 212 IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 I+++ NNQ TS + T + + P + V+G D AV A + Sbjct: 383 IHIVINNQIGFTTSNPLDARSTLYCTDVAKMVQAPVIHVNGDDPEAVVFATQVAFDFRMK 442 Query: 271 HKGPIIIEMLTYRYRGH------SMSDPANYRTREEINEMRSNH 308 K I+I+++ YR GH S++ P Y+ + + +R + Sbjct: 443 FKRDIVIDLVCYRRHGHNEADEPSVTQPKMYKKIKSMPTLREKY 486 >gi|332375486|gb|AEE62884.1| unknown [Dendroctonus ponderosae] Length = 411 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 7/133 (5%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G +++ G+A+ +K Y D GDG + +G ++ES + +NL NV+ Sbjct: 116 GTGSLGQGLAIAAGLAYVSKNYDNIDARTYCLIGDGESAEGSIWESIAFISHYNLDNVVL 175 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 +I+ N+ + A + R +F + VDG + + D A A KG Sbjct: 176 IIDANRLGQSQPTTVAHHLEVYKARLDAFGWNSLIVDGHSVEDLVKAFDNA----SATKG 231 Query: 274 -PIIIEMLTYRYR 285 P I TY+ R Sbjct: 232 KPTAIIAKTYKGR 244 >gi|326776643|ref|ZP_08235908.1| 2-oxoglutarate dehydrogenase, E1 subunit [Streptomyces cf. griseus XylebKG-1] gi|326656976|gb|EGE41822.1| 2-oxoglutarate dehydrogenase, E1 subunit [Streptomyces cf. griseus XylebKG-1] Length = 1269 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + + S++++ Sbjct: 684 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAAPESSRSSMYA 741 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P + V+G D AV A + +A ++I+++ YR RGH+ +D Sbjct: 742 TDVARMIEAPIIHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNETD 797 >gi|312792742|ref|YP_004025665.1| transketolase domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179882|gb|ADQ40052.1| Transketolase domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 282 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 9/164 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A A K D V GDG +GQ++E+ AA + L N+ ++ Sbjct: 118 GSLGQGLSVANGMALAAKLDGKDYRVYVLLGDGEIQEGQIWEAAMTAAHYKLDNLTAFLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK-GPI 275 +N + ++ + ++ +F +++DG D + +KAV + K P Sbjct: 178 HNGLQIDGKITEVMSPEPVDEKFKTFGWHVIKIDGHDFNQI----EKAVNEAKTIKEKPT 233 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRL 318 II T + +G S M + A + E +E+++K+L Sbjct: 234 IIIAETVKGKGVSFMENEAGWHGTAPNKEQAQK--ALEELQKQL 275 >gi|148360812|ref|YP_001252019.1| 2-oxoglutarate dehydrogenase E1 component [Legionella pneumophila str. Corby] gi|296106124|ref|YP_003617824.1| 2-oxoglutarate dehydrogenase E1 component [Legionella pneumophila 2300/99 Alcoy] gi|148282585|gb|ABQ56673.1| 2-oxoglutarate dehydrogenase E1 component) [Legionella pneumophila str. Corby] gi|295648025|gb|ADG23872.1| 2-oxoglutarate dehydrogenase E1 component [Legionella pneumophila 2300/99 Alcoy] Length = 936 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 14/164 (8%) Query: 159 IVGAQV--SLGTGIAFANKYRRSDKIC-VVCFGDGA-ANQGQVYESFNIAALWNL---NV 211 I+G V S+ + + N + DK+ +V GD A A QG V E+FN + Sbjct: 323 IIGPVVEGSVRSRLGRRNDLAKKDKVVPIVIHGDAAFAGQGVVMETFNFSQARGYCTGGT 382 Query: 212 IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 I+++ NNQ TS + T + + P + V+G D AV A + Sbjct: 383 IHIVINNQIGFTTSNPLDARSTLYCTDVAKMVQAPVIHVNGDDPEAVVFATQVAFDFRMK 442 Query: 271 HKGPIIIEMLTYRYRGH------SMSDPANYRTREEINEMRSNH 308 K I+I+++ YR GH S++ P Y+ + + +R + Sbjct: 443 FKRDIVIDLVCYRRHGHNEADEPSVTQPKMYKKIKSMPTLREKY 486 >gi|186470669|ref|YP_001861987.1| transketolase domain-containing protein [Burkholderia phymatum STM815] gi|184196978|gb|ACC74941.1| Transketolase domain protein [Burkholderia phymatum STM815] Length = 283 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 3/121 (2%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + S F DG ++G ++E AA Sbjct: 108 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRKGSTSFVYTLFSDGELDEGAIWEGLMSAA 167 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 W L N+I +I+ NNQ A G S ++ A + +F +V+G DI AVK D Sbjct: 168 HWKLDNLIAMIDVNNQQADGPS-TQIMAFEPLVPKLEAFGWYVQRVNGNDIDAVKQAFDN 226 Query: 264 A 264 A Sbjct: 227 A 227 >gi|125347421|ref|NP_113556.2| transketolase-like protein 1 [Mus musculus] gi|26325508|dbj|BAC26508.1| unnamed protein product [Mus musculus] gi|74143270|dbj|BAE24155.1| unnamed protein product [Mus musculus] gi|123233048|emb|CAM16270.1| transketolase-like 1 [Mus musculus] gi|148697894|gb|EDL29841.1| transketolase-like 1 [Mus musculus] Length = 595 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G G + G+A+ KY V C GD + +G V+E+F A+ +NL N++ + Sbjct: 93 GWPGQGLGAACGMAYTGKYFDQASYRVFCLLGDEESTEGSVWEAFAFASYYNLDNLMAIF 152 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ +S+S + KR +F VDG D++ + +A + P Sbjct: 153 DVNRIGHSSSMSVEHCIAIYQKRCEAFGWNTYVVDGRDVKTLCHVFSQAA---QVRGKPT 209 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 210 AVVAKTFKARG 220 >gi|162319779|ref|YP_423324.2| 2-oxoglutarate dehydrogenase E1 component [Magnetospirillum magneticum AMB-1] Length = 988 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 10/129 (7%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E+ ++ L +++I NNQ T+ + + Sbjct: 372 RKRVMGIILHGDAAFAGQGVVPETMLLSQLKGYATGGTMHIIINNQIGFTTAPQYSRSGP 431 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-- 291 + S F P V+G D AV A Y + ++I+M+ YR GH+ SD Sbjct: 432 HSSDVAKGFQAPVFHVNGDDPEAVVHVARIATEYRQEFGADVVIDMVCYRRHGHNESDEP 491 Query: 292 ----PANYR 296 P YR Sbjct: 492 AFTQPQMYR 500 >gi|77920311|ref|YP_358126.1| transketolase, N-terminal subunit [Pelobacter carbinolicus DSM 2380] gi|77546394|gb|ABA89956.1| transketolase subunit A [Pelobacter carbinolicus DSM 2380] Length = 273 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 5/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A ANK D GDG +GQ++E+ AA + L N+ V++ Sbjct: 119 GSLGQGLSQAVGLAMANKVAGRDTRVYALLGDGELQEGQIWEATMSAAHYGLSNLCIVVD 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + + +FN+ ++ DG D+ A++ +A A P + Sbjct: 179 CNGLQIDGFTEDVMNVGPVAAKFAAFNMHVIEADGHDV----ASLGQAFAAAEVSDRPTV 234 Query: 277 IEMLTYRYRGHSM 289 I T + +G S+ Sbjct: 235 IVAKTVKGKGVSI 247 >gi|54296566|ref|YP_122935.1| 2-oxoglutarate dehydrogenase E1 component [Legionella pneumophila str. Paris] gi|53750351|emb|CAH11745.1| 2-oxoglutarate dehydrogenase, E1 subunit [Legionella pneumophila str. Paris] Length = 936 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 14/164 (8%) Query: 159 IVGAQV--SLGTGIAFANKYRRSDKIC-VVCFGDGA-ANQGQVYESFNIAALWNL---NV 211 I+G V S+ + + N + DK+ +V GD A A QG V E+FN + Sbjct: 323 IIGPVVEGSVRSRLGRRNDLAKKDKVVPIVIHGDAAFAGQGVVMETFNFSQARGYCTGGT 382 Query: 212 IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 I+++ NNQ TS + T + + P + V+G D AV A + Sbjct: 383 IHIVINNQIGFTTSNPLDARSTLYCTDVAKMVQAPVIHVNGDDPEAVVFATQVAFDFRMK 442 Query: 271 HKGPIIIEMLTYRYRGH------SMSDPANYRTREEINEMRSNH 308 K I+I+++ YR GH S++ P Y+ + + +R + Sbjct: 443 FKRDIVIDLVCYRRHGHNEADEPSVTQPKMYKKIKSMPTLREKY 486 >gi|86130788|ref|ZP_01049387.1| 2-oxoglutarate dehydrogenase E1 component [Dokdonia donghaensis MED134] gi|85818199|gb|EAQ39359.1| 2-oxoglutarate dehydrogenase E1 component [Dokdonia donghaensis MED134] Length = 938 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 4/168 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A A QG VYE +A L I+++ NNQ T+ A + T + Sbjct: 355 LPIAIHGDAAVAGQGIVYEIVQMAQLEGYRTGGTIHIVANNQVGFTTNYLDARSSTYSTD 414 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 G P + V+ D+ +V A+ + + I++L YR GH+ D + Sbjct: 415 VGKVTLSPVLHVNADDVESVCHAFAFALDFRMQFGRDVFIDILGYRKYGHNEGDEPRFTQ 474 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + + +P + +RLL +G +K++E + + +E Sbjct: 475 PLLYKAISKHSNPRDIYAERLLKEGVIEKGYVKQLEKEYKDDLEEDLE 522 >gi|297157292|gb|ADI07004.1| alpha-ketoglutarate decarboxylase [Streptomyces bingchenggensis BCW-1] Length = 1276 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++++ NNQ +G + + A+++++ Sbjct: 691 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHIVINNQ--VGFTAAPAASRSSMYA 748 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ +D Sbjct: 749 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNETD 804 >gi|262276214|ref|ZP_06054023.1| 2-oxoglutarate dehydrogenase E1 component [Grimontia hollisae CIP 101886] gi|262220022|gb|EEY71338.1| 2-oxoglutarate dehydrogenase E1 component [Grimontia hollisae CIP 101886] Length = 936 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 24/198 (12%) Query: 119 GVDASKIMAELTGRQG-----GISKGKGGSMHMFSTKNG-------FYGGHGIVGAQVSL 166 G S++ E G+ G G K G F+T G F H + V + Sbjct: 275 GKKPSELFDEFAGKHGESWGTGDVKYHQGFSSDFATPGGDVHLVLAFNPSHLEIVNPVVM 334 Query: 167 GTGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIEN 217 G+ A + R DK + + GD A A QG V E+FN++ V + ++ N Sbjct: 335 GS--VRARQDRLGDKDGSMVLPITIHGDSAIAGQGVVQETFNMSQARGYKVGGTVRIVVN 392 Query: 218 NQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NQ TS + T + + P V+ D AV A+ Y K ++ Sbjct: 393 NQVGFTTSNPNDTRSTQYCTDIAKMVQAPIFHVNADDPEAVAFVARLAIDYRNEFKRDVV 452 Query: 277 IEMLTYRYRGHSMSDPAN 294 I+++ YR GH+ +D N Sbjct: 453 IDLVCYRRHGHNEADEPN 470 >gi|242278051|ref|YP_002990180.1| transketolase [Desulfovibrio salexigens DSM 2638] gi|242120945|gb|ACS78641.1| Transketolase domain protein [Desulfovibrio salexigens DSM 2638] Length = 276 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 1/102 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S G A K + + V GDG N+GQ++E AA L N++ V++ Sbjct: 116 GSLGQGFSFALGCALGAKRAKRENRTYVLLGDGELNEGQIWEGCMFAAHHKLDNIVAVVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 N++ +A + + +F ++VDG D R ++ Sbjct: 176 YNKFQSDDLNENITALEPLNDKFKAFGWQVIEVDGHDFREIE 217 >gi|148696749|gb|EDL28696.1| transketolase-like 2 [Mus musculus] Length = 639 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+ A+ +NL N++ + Sbjct: 137 GSLGQGLGAACGMAYTGKYFDKASYRVFCLMGDGESSEGSVWEALAFASHYNLDNLVAIF 196 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + + KR +F VDG D+ A+ KA + P Sbjct: 197 DVNRLGQSGTAPLEHCTAVYEKRCQAFGWNTYVVDGHDVEALCQAFWKAA---QVKNKPT 253 Query: 276 IIEMLTYRYRG-HSMSDPANY 295 + T++ RG ++ D N+ Sbjct: 254 ALIAKTFKGRGIPNVEDAENW 274 >gi|325663665|ref|ZP_08152069.1| hypothetical protein HMPREF0490_02810 [Lachnospiraceae bacterium 4_1_37FAA] gi|331087179|ref|ZP_08336249.1| hypothetical protein HMPREF0987_02552 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470158|gb|EGC73391.1| hypothetical protein HMPREF0490_02810 [Lachnospiraceae bacterium 4_1_37FAA] gi|330408865|gb|EGG88326.1| hypothetical protein HMPREF0987_02552 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 278 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A K D GDG +GQV+E+ +A L N++ +++ Sbjct: 115 GSLGQGISAAVGMAIGAKLSGDDYRVYTLLGDGEIQEGQVWEAAMLAGHRKLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + +++ ++ K+ +FN + +DG + + A +A Sbjct: 175 NNGLQIDGNIADVNSPYPIDKKFDAFNFHVINIDGHNFDEIAAAFKEA 222 >gi|293391985|ref|ZP_06636319.1| transketolase, N- subunit [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952519|gb|EFE02638.1| transketolase, N- subunit [Aggregatibacter actinomycetemcomitans D7S-1] Length = 274 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 9/116 (7%) Query: 158 GIVGAQVSLGTGIAFANKYR-RSDK-ICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G +S+ GIA +++ R + D+ C+V GDG N+GQ +E+F A NL N+ + Sbjct: 115 GSLGQGISIAAGIALSHQLRGKPDRTFCIV--GDGELNEGQCWEAFQFIAHRNLTNLCVI 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI----RAVKATMDKAVA 266 ++ N+ + ++ + + +F V G DI R + AT + +A Sbjct: 173 VDYNKLQLDGCLTDIINPFSLQDKFAAFGFAVETVKGDDIDALCRVLSATPTRPLA 228 >gi|81867902|sp|Q99MX0|TKTL1_MOUSE RecName: Full=Transketolase-like protein 1; AltName: Full=Transketolase 2; Short=TK 2 gi|13603825|gb|AAK31950.1|AF285571_1 transketolase-like 1 [Mus musculus] gi|88682943|gb|AAI13769.1| Transketolase-like 1 [Mus musculus] Length = 595 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G G + G+A+ KY V C GD + +G V+E+F A+ +NL N++ + Sbjct: 93 GWPGQGLGAACGMAYTGKYFDQASYRVFCLLGDEESTEGSVWEAFAFASYYNLDNLMAIF 152 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ +S+S + KR +F VDG D++ + +A + P Sbjct: 153 DVNRIGHSSSMSVEHCIAIYQKRCEAFGWNTYVVDGRDVKTLCHVFSQAA---QVRGKPT 209 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 210 AVVAKTFKARG 220 >gi|326382057|ref|ZP_08203750.1| alpha-ketoglutarate decarboxylase [Gordonia neofelifaecis NRRL B-59395] gi|326199483|gb|EGD56664.1| alpha-ketoglutarate decarboxylase [Gordonia neofelifaecis NRRL B-59395] Length = 1244 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 21/160 (13%) Query: 158 GIVGA-QVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---I 212 GIV A Q S+G FA + ++ GD A A QG V E N++ L + Sbjct: 643 GIVRAKQDSMGEAREFA-------VLPLMLHGDAAFAGQGIVAEVLNMSMLNGYRTGGTV 695 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +++ NNQ T+ + + + P V+G D A AV Y A Sbjct: 696 HIVVNNQVGFTTAPEHSRSTQYCTDVAKMIGAPVFHVNGDDPEACVWAAKLAVDYREAFN 755 Query: 273 GPIIIEMLTYRYRGH------SMSDPANYRTREEINEMRS 306 ++I+++ YR GH SM+ PA Y + IN +RS Sbjct: 756 RDVVIDLVCYRRLGHNEGDDPSMTQPAMY---DVINNLRS 792 >gi|320101599|ref|YP_004177190.1| 2-oxoglutarate dehydrogenase E1 component [Isosphaera pallida ATCC 43644] gi|319748881|gb|ADV60641.1| 2-oxoglutarate dehydrogenase E1 component [Isosphaera pallida ATCC 43644] Length = 1005 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 5/137 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N++ L +++I NNQ T+ A + + Sbjct: 354 LPLLIHGDAAFAGQGIVAETLNLSRLPGYRTGGTVHIIVNNQIGFTTAPKDARSSPYCTD 413 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 ++P V+G D AV + A+ + + ++I+++ YR GH+ D + T Sbjct: 414 VAKMIDVPIFHVNGDDPEAVVHVAEIALDFRQTFGMDVVIDLVCYRRHGHNELDEPRF-T 472 Query: 298 REEINEMRSNHDPIEQV 314 + + P++Q+ Sbjct: 473 QPRMYRAIDARPPVKQI 489 >gi|260772359|ref|ZP_05881275.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio metschnikovii CIP 69.14] gi|260611498|gb|EEX36701.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio metschnikovii CIP 69.14] Length = 936 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 5/118 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+FN++ V + ++ NNQ TS R + T + + Sbjct: 353 LPITIHGDSAIAGQGVVAETFNMSLARGYCVGGTVRIVINNQVGFTTSNPRDTRSTMYCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P + V+ D AV A+ Y K ++IE++ YR GH+ +D N Sbjct: 413 DIAKMVQAPILHVNSDDPEAVAFVTRMALDYRNEFKRDVVIELVCYRRHGHNEADEPN 470 >gi|147907240|ref|NP_001087546.1| 2-oxoglutarate dehydrogenase-like, mitochondrial precursor [Xenopus laevis] gi|82181745|sp|Q68EW0|OGDHL_XENLA RecName: Full=2-oxoglutarate dehydrogenase-like, mitochondrial; AltName: Full=2-oxoglutarate dehydrogenase complex component E1-like; Short=OGDC-E1-like; AltName: Full=Alpha-ketoglutarate dehydrogenase-like; Flags: Precursor gi|51258647|gb|AAH80090.1| MGC84242 protein [Xenopus laevis] Length = 1018 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 10/130 (7%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A ++ R D + ++ GD A A QG VYE+F+++ L + I+++ NNQ Sbjct: 385 AEQFYRGDTEGNKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTNGTIHIVVNNQIGFT 444 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T A + + N P V+ D AV A + ++++++ YR Sbjct: 445 TDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVMYVCSVAAEWRNTFNKDVVVDLVCYR 504 Query: 284 YRGHS-MSDP 292 GH+ M +P Sbjct: 505 RSGHNEMDEP 514 >gi|114769291|ref|ZP_01446917.1| 2-oxoglutarate dehydrogenase, E1 component [alpha proteobacterium HTCC2255] gi|114550208|gb|EAU53089.1| 2-oxoglutarate dehydrogenase, E1 component [alpha proteobacterium HTCC2255] Length = 983 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 43/211 (20%), Positives = 91/211 (43%), Gaps = 9/211 (4%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK--ICVVCFGDGA-ANQGQV 197 G S+H+ T N H V LG A +++ R + V+ GD A + QG + Sbjct: 344 GNSVHLSLTANP---SHLEAVNPVVLGKARAKGDQHGRDRGAVMPVLLHGDAAFSGQGVI 400 Query: 198 YESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 E F ++ L ++++ NNQ TS + + + + P V+G D Sbjct: 401 AECFGLSGLKGHITGGTMHIVVNNQIGFTTSPHDSRSSPYPTDISLMVEAPIFHVNGDDP 460 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV A + + + +++++ YR GH+ D + + +++++ + Sbjct: 461 EAVVHAAKVATEFRQKFRKDVVLDIFCYRRFGHNEGDEPMFTQPQMYKKIKTHKTSLSIY 520 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 +RL+ + EG++++++ + +N E Sbjct: 521 TERLVKDGLIPEGEIEDMKAAFQMRLNEEFE 551 >gi|322831972|ref|YP_004211999.1| Transketolase domain-containing protein [Rahnella sp. Y9602] gi|321167173|gb|ADW72872.1| Transketolase domain-containing protein [Rahnella sp. Y9602] Length = 277 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 8/132 (6%) Query: 158 GIVGAQVSLGTGIAFANKYR-RSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G VS+ G+A ++K RS+++ + GDG N+GQ +E+F A NL N+ I Sbjct: 116 GSLGQGVSIAAGMALSHKLAGRSNRVFCI-LGDGELNEGQCWEAFQFIAHHNLHNLTLFI 174 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR-AHKGP 274 + N+ + ++ + + + +F + G DI A+ +AV R A + P Sbjct: 175 DYNKQQLDGTLDEVIKPFDLAGKFSAFGFDVETIKGDDIVAIS----EAVTPVRHAEQRP 230 Query: 275 IIIEMLTYRYRG 286 +++ + + + +G Sbjct: 231 LVVILDSIKGQG 242 >gi|253699359|ref|YP_003020548.1| 2-oxoglutarate dehydrogenase E1 component [Geobacter sp. M21] gi|251774209|gb|ACT16790.1| 2-oxoglutarate dehydrogenase, E1 subunit [Geobacter sp. M21] Length = 896 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N++ L ++V+ NNQ TS + A + + Sbjct: 321 LPLLIHGDAAFAGQGVVAETLNLSQLAGYRTGGTLHVVLNNQIGFTTSAADARSSHYATD 380 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V G D AV A+ Y ++ +++E++ YR GH+ D Sbjct: 381 VAKMVRAPVFHVYGDDAEAVVRIAQLALEYRDRYRKDVVVEVICYRRHGHNEGD 434 >gi|319934818|ref|ZP_08009263.1| hypothetical protein HMPREF9488_00094 [Coprobacillus sp. 29_1] gi|319810195|gb|EFW06557.1| hypothetical protein HMPREF9488_00094 [Coprobacillus sp. 29_1] Length = 275 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 22/108 (20%), Positives = 56/108 (51%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G++G S+ G A K + + GDG +G+++E+ AA +L N++++I+ Sbjct: 111 GLLGQGFSMAVGHAIVKKNNKENHRIYAIAGDGEMQEGEMWEAMMSAAHHHLNNLVFIID 170 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N+ + G + +F + +F+ +++DG +++ + + +++ Sbjct: 171 YNKLSSGGPTNDVIYMESFVDKAKAFHFHTIEIDGHNMKQIVSALNET 218 >gi|289678059|ref|ZP_06498949.1| transketolase, N-terminal subunit, putative [Pseudomonas syringae pv. syringae FF5] Length = 169 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 68/158 (43%), Gaps = 18/158 (11%) Query: 156 GHGIVGAQVSLGTGIAFAN----KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G I G + G GIA K + S DG N+G +E+ A+ W L N Sbjct: 3 GMEITGGSLGHGLGIAVGACLGLKRKNSSAFVYNLLSDGELNEGSTWEAAMSASHWKLDN 62 Query: 211 VIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 +I +I+ NNQ A G S S A R +F +VDG D+ A+ A D A R Sbjct: 63 LIAIIDVNNQQADGHS-SEVLAFEPIVDRWQAFGWFTQRVDGNDLDALVAAFDNA----R 117 Query: 270 AHKG--PIIIEMLTYRYRGHSMSDPANYRTREEINEMR 305 H G P II T +G A TRE+ + +R Sbjct: 118 QHAGAQPRIIICDTKMGKG-----VAFLETREKTHFIR 150 >gi|254440350|ref|ZP_05053844.1| Transketolase, thiamine diphosphate binding domain, putative [Octadecabacter antarcticus 307] gi|198255796|gb|EDY80110.1| Transketolase, thiamine diphosphate binding domain, putative [Octadecabacter antarcticus 307] Length = 280 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 5/119 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A K + + DG +G +E+ W L N+I +++ Sbjct: 119 GSLGHGLGIAVGMALGLKRKNNPAFVYNMMSDGELGEGSTWEAVMSGVQWKLDNLIAIVD 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 N + A AQ + R F ++DG D+ A+ A D A RAH P+ Sbjct: 179 FNDQQADGKTTDALAQVPEAGRWEGFGWFAQEIDGNDMDALVAAFDAA----RAHPDPV 233 >gi|158287461|ref|XP_309488.4| AGAP011161-PA [Anopheles gambiae str. PEST] gi|157019661|gb|EAA05148.4| AGAP011161-PA [Anopheles gambiae str. PEST] Length = 627 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 7/131 (5%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G +G V++ G+A+ K ++D V GDG + +G ++ES + A + LN + V Sbjct: 121 GTGSLGQGVAVACGMAYVGKNLDKADYRTYVLVGDGESAEGSIWESLHFAGYYKLNNLCV 180 Query: 215 I-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV-KATMDKAVAYCRAHK 272 I + N+ + S + KR +F + VDG D+ + KA + A R Sbjct: 181 IFDVNRLGQSEATSLQHQMEVYRKRLDAFGFNAIVVDGHDVEELCKAFFEAASTTDR--- 237 Query: 273 GPIIIEMLTYR 283 P I TY+ Sbjct: 238 -PTAIIAKTYK 247 >gi|325286724|ref|YP_004262514.1| 2-oxoglutarate dehydrogenase, E1 subunit [Cellulophaga lytica DSM 7489] gi|324322178|gb|ADY29643.1| 2-oxoglutarate dehydrogenase, E1 subunit [Cellulophaga lytica DSM 7489] Length = 922 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 6/172 (3%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAAL--WNLN-VIYVIENNQYAMGTSVSRASAQTN 234 S + +V GD A A QG VYE +A L + N I+++ NNQ T+ A + T Sbjct: 329 SKVLPIVVHGDAAIAGQGLVYEVVQMANLDGYKTNGTIHIVVNNQIGFTTNYLDARSSTY 388 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + P + V+ D AV A+ Y + I++L YR GH+ D Sbjct: 389 CTDVAKVTLSPVLHVNADDAEAVVHASLFALEYRMRFNRDVFIDLLGYRKYGHNEGDEPR 448 Query: 295 YRTREEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + T+ ++ + S H+ + +RLL +G +KE+E + + +E Sbjct: 449 F-TQPKLYKAISKHNNSRDIYAERLLAEGVIEKGFVKELENEYKASLEEELE 499 >gi|289769131|ref|ZP_06528509.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Streptomyces lividans TK24] gi|289699330|gb|EFD66759.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Streptomyces lividans TK24] Length = 1117 Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + + S++++ Sbjct: 532 LPVAIHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAAPESSRSSMYA 589 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 V+ I P V+G D AV A + +A ++I+++ YR RGH+ +D PA Sbjct: 590 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNETDNPA 648 >gi|206900983|ref|YP_002251718.1| transketolase, putative [Dictyoglomus thermophilum H-6-12] gi|206740086|gb|ACI19144.1| transketolase, putative [Dictyoglomus thermophilum H-6-12] Length = 640 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 2/109 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A + K + D V GDG +GQ+ E+ A +NL N+ +I+ Sbjct: 127 GNLGQGLSAGCGMAISAKLLKKDFHVFVVMGDGEQQKGQISEARRFAKKYNLSNLTVLID 186 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 N+ + +S Q N + ++ ++VDG D +A+ + +A+ Sbjct: 187 YNKLQLSGPLSEIMPQ-NIKENYLADGWEVIEVDGHDFKALYKAIREAI 234 >gi|289739979|gb|ADD18737.1| transketolase [Glossina morsitans morsitans] Length = 627 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 2/101 (1%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++ G+A+ K + +SD V GDG + +G V+ES + A + L N+ Sbjct: 120 GTGSLGQGVAVAAGMAYVGKNFDKSDYRTYVLVGDGESAEGSVWESLHFAGHYKLDNLCV 179 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + + N+ S + +R +F + VDG D+ Sbjct: 180 IFDVNRLGQSEPTSLQHQMDVYRQRLEAFGFNALVVDGHDV 220 >gi|94969264|ref|YP_591312.1| transketolase [Candidatus Koribacter versatilis Ellin345] gi|94551314|gb|ABF41238.1| Transketolase-like protein [Candidatus Koribacter versatilis Ellin345] Length = 689 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G G +G +S+ G A A++ RR+ C++ GDG +G ++E+ AA + L Sbjct: 123 GVEASTGSLGQGLSVAVGSALASRLDGRRNKVFCIM--GDGEQQEGNIWEAVMEAAHYKL 180 Query: 210 -NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 NVI +I+ N+ + V + R SF ++ DG D+ V +++AV Sbjct: 181 DNVIGIIDENRLQIDGPVCEVMNVAPLADRYRSFGWLVIECDGHDMEQVVNALNQAV 237 >gi|88856384|ref|ZP_01131043.1| alpha-ketoglutarate decarboxylase [marine actinobacterium PHSC20C1] gi|88814468|gb|EAR24331.1| alpha-ketoglutarate decarboxylase [marine actinobacterium PHSC20C1] Length = 1279 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 14/152 (9%) Query: 169 GIAFANKYRRS----DKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQY 220 GI A + RR + V+ GD A A QG V E ++ L I+V NNQ Sbjct: 672 GIVRAKQDRRPIGSYAVLPVMVHGDAAMAGQGIVVEILQMSQLRAYRTGGTIHVNINNQV 731 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 T A S + P V+G D AV + A AY + ++I+++ Sbjct: 732 GFTTPPGEARTSQYSSDVAKTVQAPIFHVNGDDPEAVVRVSELAFAYRQKFHRDVVIDLI 791 Query: 281 TYRYRGH------SMSDPANYRTREEINEMRS 306 YR RGH SM+ P Y E +R+ Sbjct: 792 CYRRRGHNEGDDPSMTQPLMYNLIEAKRSVRT 823 >gi|307594366|ref|YP_003900683.1| transketolase central region [Vulcanisaeta distributa DSM 14429] gi|307549567|gb|ADN49632.1| Transketolase central region [Vulcanisaeta distributa DSM 14429] Length = 580 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 12/134 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRR-SDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S+G G+A AN+ + +D I V GDG N+GQ +E+ A + L N++ ++ Sbjct: 130 GSLGQGLSMGVGLALANRVKGCNDGIVYVLMGDGELNEGQPWEAAMTAVKYGLDNLVVIV 189 Query: 216 ENNQYAMGTSVSRASAQTNFSK--RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 N Y + V N+++ + +N+ + +G D + ++KA R +G Sbjct: 190 SLNGYQLDGPVGTIKP-INYARVFEAIGWNV--LYGNGHDYEDIVRLINKA----REVRG 242 Query: 274 -PIIIEMLTYRYRG 286 P ++ + T R RG Sbjct: 243 KPTVVFLSTVRGRG 256 >gi|315497284|ref|YP_004086088.1| 2-oxoglutarate dehydrogenase, e1 subunit [Asticcacaulis excentricus CB 48] gi|315415296|gb|ADU11937.1| 2-oxoglutarate dehydrogenase, E1 subunit [Asticcacaulis excentricus CB 48] Length = 993 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 4/122 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS I ++ GD A A QG V E F + L +++I NNQ T+ + + Sbjct: 392 RSQTIPLILHGDAAFAGQGVVAECFALMGLKGYKTGGTLHIIVNNQIGFTTAPRFSRSSP 451 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + + P + +G D AV A + + ++I+M YR GH+ D Sbjct: 452 YPSDQALGAQAPILHCNGDDPEAVVYCAKVATEFRQKFAKDVVIDMFCYRRFGHNEGDDP 511 Query: 294 NY 295 + Sbjct: 512 TF 513 >gi|223984640|ref|ZP_03634763.1| hypothetical protein HOLDEFILI_02059 [Holdemania filiformis DSM 12042] gi|223963381|gb|EEF67770.1| hypothetical protein HOLDEFILI_02059 [Holdemania filiformis DSM 12042] Length = 273 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 7/142 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K D GDG + +GQ++E+ AA + L N++ +++ Sbjct: 114 GSLGQGLSSAVGMAMSYKIHHQDFRVYALVGDGESEEGQIWEAAMAAAHYKLDNLVAILD 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + ++ T F + +F ++VDG D ++ A A R KG P Sbjct: 174 FNGLQIDGKITDVMNPTPFDTKFRAFGWNVVEVDGHDYD----QLENAYAAARECKGQPT 229 Query: 276 IIEMLTYRYRGHS-MSDPANYR 296 +I T + +G S M + N+ Sbjct: 230 LILAHTVKGKGVSFMENKENWH 251 >gi|220673290|emb|CAX13412.1| oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Danio rerio] gi|220679080|emb|CAX12548.1| oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Danio rerio] Length = 1022 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVANNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV + A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNADDPEAVMYVCNVAAEWRATFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|153006161|ref|YP_001380486.1| transketolase [Anaeromyxobacter sp. Fw109-5] gi|152029734|gb|ABS27502.1| Transketolase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 612 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A + R D C V GD ++G VYE+ + + L +++ +++ Sbjct: 116 GSLGQGLPIAIGVALAARLTRRDLRCWVLLGDSEMSEGSVYEALELGGHYRLASLVAIVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N+ ++ R +F + +DG D A+ Sbjct: 176 MNRLGQRGPTMLGWEGERYADRARAFGWKALVIDGHDHPAI 216 >gi|148262573|ref|YP_001229279.1| transketolase domain-containing protein [Geobacter uraniireducens Rf4] gi|146396073|gb|ABQ24706.1| transketolase subunit A [Geobacter uraniireducens Rf4] Length = 276 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K D GDG +GQV+E+ AA + L N+ +++ Sbjct: 117 GSLGQGLSMANGMALGLKLDGRDNRVYALLGDGELQEGQVWEAAMAAAHYKLDNLCAMVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + V++ + + +F + +DG D+ A+ +D A KG P Sbjct: 177 ANNLQIDGDVAKVMNVAPITDKFSAFGWHVLDIDGHDLEAIVNALDAAETV----KGKPT 232 Query: 276 IIEMLTYRYRGHS 288 +I T + +G S Sbjct: 233 VIVARTVKGKGVS 245 >gi|324514311|gb|ADY45825.1| 2-oxoglutarate dehydrogenase [Ascaris suum] Length = 337 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 4/169 (2%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 +V GD A +G V E+FN+ L V I+V+ NNQ T + + + G Sbjct: 119 IVMHGDAALCGEGVVMETFNLNDLNAYTVHGCIHVVVNNQIGFTTDPRASRSSPYCTDIG 178 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 P V+ D AV + A + R K +II+++ YR +GH+ D + Sbjct: 179 RVIGCPIFHVNSDDPEAVIFVCNVASEWRRTFKKDVIIDLVCYRRQGHNELDEPMFTQPL 238 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++ + +K+++ A++ +K+ I+ + E AQ Sbjct: 239 MYQRIKQTKPVLSVYQKQVVKEGIANDQFVKDEVAKYNAILEEAYESAQ 287 >gi|308535183|ref|YP_002137527.2| 2-oxoglutarate dehydrogenase E1 component [Geobacter bemidjiensis Bem] gi|308052528|gb|ACH37731.2| 2-oxoglutarate dehydrogenase, E1 protein [Geobacter bemidjiensis Bem] Length = 897 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N++ L ++V+ NNQ TS + A + + Sbjct: 322 LPLLIHGDAAFAGQGVVAETLNLSQLAGYRTGGTLHVVLNNQIGFTTSAADARSSHYATD 381 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V G D AV A+ Y ++ +++E++ YR GH+ D Sbjct: 382 VAKMVRAPVFHVYGDDAEAVVHIAQLALEYRDRYRKDVVVEVICYRRHGHNEGD 435 >gi|150401925|ref|YP_001325691.1| transketolase domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150014628|gb|ABR57079.1| Transketolase domain protein [Methanococcus aeolicus Nankai-3] Length = 272 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 1/114 (0%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G +S+ G+A K + D + GDG +GQV+E+ A+ + L N Sbjct: 111 GIEANTGSLGHGISVAVGMALGCKLDKLDNMVYTLLGDGECQEGQVWEAAMAASHYKLDN 170 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 +I ++ N+ + S + S++ +F ++DG D + T++ A Sbjct: 171 LIGFVDRNRLQIDGSTKDVMCLGDISEKFKAFGWDVYEIDGHDYNQIINTINTA 224 >gi|93004942|ref|YP_579379.1| alpha-ketoglutarate decarboxylase [Psychrobacter cryohalolentis K5] gi|92392620|gb|ABE73895.1| 2-oxoglutarate dehydrogenase E1 component [Psychrobacter cryohalolentis K5] Length = 961 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 21/167 (12%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----------ICVVCFGD 189 GG H+ F H + A V G+ A + RR+D+ + +V GD Sbjct: 318 GGEAHL---ALAFNPSHLEIVAPVLQGS--VRARQVRRNDQPLHENKTGNSVLPIVIHGD 372 Query: 190 GA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNI 244 A A QG V E+F ++ A I+++ NNQ TS + T + + + Sbjct: 373 AAFAGQGVVQETFQMSQTRAYTTGGTIHIVINNQVGFTTSRQEDARSTEYCTDVAKMVHA 432 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P + V+G D +V A+ Y III++ YR GH+ +D Sbjct: 433 PILHVNGDDPESVVFAAQLALDYRHEFDKDIIIDLFCYRRNGHNEAD 479 >gi|228936378|ref|ZP_04099176.1| Transketolase domain protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823210|gb|EEM69044.1| Transketolase domain protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 247 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 7/139 (5%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G +SLG G++ K + V GDG +G V+E+ A L N Sbjct: 90 GIDASSGSLGIGLSLGIGMSIGLKKDNINSKVYVVLGDGECQEGAVWEAIMYAGSNKLDN 149 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 ++ +I+NN+ + Q N ++R SF +VDG + ++ ++ Sbjct: 150 LVAIIDNNKLQSSNYTNDVINQNNIAERWRSFGWETFEVDGHNQEELEKVLN------LP 203 Query: 271 HKGPIIIEMLTYRYRGHSM 289 K P +I T + +G S Sbjct: 204 QKQPKVIIAHTLKGKGVSF 222 >gi|256785240|ref|ZP_05523671.1| alpha-ketoglutarate decarboxylase [Streptomyces lividans TK24] Length = 1130 Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + + S++++ Sbjct: 545 LPVAIHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAAPESSRSSMYA 602 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ +D Sbjct: 603 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNETD 658 >gi|254028264|ref|NP_957073.2| oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Danio rerio] Length = 1022 Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVANNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV + A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNADDPEAVMYVCNVAAEWRATFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|91214791|ref|ZP_01251764.1| hypothetical protein P700755_18039 [Psychroflexus torquis ATCC 700755] gi|91187218|gb|EAS73588.1| hypothetical protein P700755_18039 [Psychroflexus torquis ATCC 700755] Length = 803 Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust. Identities = 33/167 (19%), Positives = 76/167 (45%), Gaps = 8/167 (4%) Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN----- 234 ++I G+ + ++G +E+FN A + + ++ + ++ Y + + + + N Sbjct: 178 NEIAWGTIGNASTSEGLFWETFNAAGVMQVPMVINVWDDDYGISVHARKQTTKENISEIL 237 Query: 235 --FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML-TYRYRGHSMSD 291 F K + + V G D A+ KA R P++I ++ + +GHS S Sbjct: 238 KGFQKEKDTNGYEILVVKGWDYPALIEAYQKAEKIAREQHVPVLIHVVEVTQPQGHSTSG 297 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 E+ + HD ++R+ ++ N +A + +L ++E +++K Sbjct: 298 SHERYKSEDRLQWEKEHDCNLKMREWIISNGFAIDEELIDLEKSIKK 344 >gi|85704796|ref|ZP_01035897.1| 2-oxoglutarate dehydrogenase, E1 component [Roseovarius sp. 217] gi|85670614|gb|EAQ25474.1| 2-oxoglutarate dehydrogenase, E1 component [Roseovarius sp. 217] Length = 986 Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 80/188 (42%), Gaps = 5/188 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R+ + ++ GD A A QG V E F ++ L I+++ NNQ T+ + Sbjct: 379 NDTDRTKVLPILLHGDAAFAGQGVVAECFGLSGLKGHRTGGTIHLVVNNQIGFTTAPHFS 438 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D A A + + ++I+M+ YR GH+ Sbjct: 439 RSSPYPTDIALMVEAPIFHVNGDDPEACVHAARVATEFRQKFHKDVVIDMICYRRFGHNE 498 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + +++ + +RL+ + EG++++++ + + + + A Sbjct: 499 GDEPMFTNPVMYKKIKQQKTTLSLYTERLVKDGLIPEGEIEDMKTAFQAYLADEFD-AGK 557 Query: 350 DKEPDPAE 357 D P+ A+ Sbjct: 558 DYRPNKAD 565 >gi|297626222|ref|YP_003687985.1| 2-oxoglutarate dehydrogenase, E1 and E2 components [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921987|emb|CBL56549.1| 2-oxoglutarate dehydrogenase, E1 and E2 components [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 1261 Score = 43.9 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 6/117 (5%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD + + QG VYE ++ L V ++++ NNQ TS S + + Sbjct: 671 ILMHGDASFSAQGIVYEVLQMSQLRPYRVGGTVHLVVNNQLGFTTSPSDGRSSKYCTDVA 730 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAY-CRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + P + V+G D A + A + R HK ++I+M+ YR RGH+ D ++ Sbjct: 731 KALGAPVIHVNGDDPDACARAAELAFDFRARFHKD-VVIDMVCYRLRGHNEGDDPSF 786 >gi|294678177|ref|YP_003578792.1| transketolase, N-terminal subunit [Rhodobacter capsulatus SB 1003] gi|294476997|gb|ADE86385.1| transketolase, N-terminal subunit [Rhodobacter capsulatus SB 1003] Length = 274 Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + TGIA A + +D V GDG +G +E+ A L N+ +I+ Sbjct: 120 GPLGHGFPVATGIAIAGQLTGADYRTFVLTGDGEQQEGSNWEAAMTAGFRKLENLTLIID 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ G S S +R +F VDG D+ A+ +D A + P+ Sbjct: 180 RNRLQQGQSTEETSGMEPLDERYRAFGFEVAVVDGHDLGAL---LDVLSAAPKGRGKPLC 236 Query: 277 IEMLTYRYRGHSM 289 + T + +G S Sbjct: 237 VIANTVKGKGVSF 249 >gi|11994386|dbj|BAB02345.1| 1-deoxyxylulose-5-phosphate synthase; transketolase [Arabidopsis thaliana] Length = 604 Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust. Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 46/198 (23%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ G M NG G G G +S G G+A + + Sbjct: 70 ILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSV 129 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY----------------AMGTSVS 227 V GDGA GQ YE+ N A + N+I ++ +N+ A+ ++S Sbjct: 130 VSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALS 189 Query: 228 ---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK--GPII 276 R ++ T F + G + P VDG +I + + ++ ++ K GP++ Sbjct: 190 RLQSNCGMIRETSSTLFEELGFHYVGP---VDGHNIDDLVSILET----LKSTKTIGPVL 242 Query: 277 IEMLTYRYRGHSMSDPAN 294 I ++T + RG+ ++ A+ Sbjct: 243 IHVVTEKGRGYPYAERAD 260 >gi|329897919|ref|ZP_08272252.1| Transketolase [gamma proteobacterium IMCC3088] gi|328921006|gb|EGG28426.1| Transketolase [gamma proteobacterium IMCC3088] Length = 288 Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A A K R D V GDG ++GQV+E+ A + N++ +++ Sbjct: 129 GSLGHNLSVGLGMALAAKRRGFDHRMYVLLGDGEIHEGQVWEAAMAAGHYKADNLVAIVD 188 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + R SF ++VDG D A+ +A Sbjct: 189 ANGSCADGPTESVMSIEPLVDRFSSFGWHCVEVDGHDTAALMQAFKQA 236 >gi|195452366|ref|XP_002073322.1| GK13217 [Drosophila willistoni] gi|194169407|gb|EDW84308.1| GK13217 [Drosophila willistoni] Length = 626 Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 2/101 (1%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++G G+A+ K + ++D V GDG + +G V+ES + A + L N+ Sbjct: 120 GTGSLGQGVAVGAGMAYVGKNFDKADYRTYVVVGDGESAEGSVWESLHFAGHYGLDNLCV 179 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + + N+ S + R +F + VDG D+ Sbjct: 180 IFDVNRLGQSEPTSLQHKLDVYRDRLEAFGFNALVVDGHDV 220 >gi|86606357|ref|YP_475120.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. JA-3-3Ab] gi|118595623|sp|Q2JTX2|DXS_SYNJA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|86554899|gb|ABC99857.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. JA-3-3Ab] Length = 649 Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 103/273 (37%), Gaps = 50/273 (18%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E++ N+ + LS +L L R+ EK Q VG CHL G V + + + T Sbjct: 5 EITHPNQLRNLSLSQLRSLARQIREKHLQTAANSPVG--CHLGPGLGVVELTLALYKT-- 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFST---KNGFYG---- 155 +D K++ ++ G Q K G H F T K G G Sbjct: 61 ---------------LDLDRDKVIWDV-GHQAYAHKMLTGRYHNFHTIRQKGGISGYLKR 104 Query: 156 --------GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-L 206 G G +S G+A A R + V GDGA G YE+ N A L Sbjct: 105 SESRFDHFGAGHASTSISAALGMAIARDRRGENFKVVAIIGDGALTGGMAYEAINHAGHL 164 Query: 207 WNLNVIYVIENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDG----MD 253 N++ ++ +N ++ +V R S F + + + + G + Sbjct: 165 PKTNLMVILNDNGMSISPNVGAIPRYLNRLRLSPPVQFLADSLEEQLKNLPLVGSSLSPE 224 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 I +K T+ K V + +K II E L + Y G Sbjct: 225 IDRLKETV-KLVTAVQNNKAGIIFEELGFTYVG 256 >gi|171060941|ref|YP_001793290.1| transketolase domain-containing protein [Leptothrix cholodnii SP-6] gi|170778386|gb|ACB36525.1| Transketolase domain protein [Leptothrix cholodnii SP-6] Length = 287 Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 3/125 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +++G G+A K++++ DG ++G V+E+ AA L N+I +I+ Sbjct: 123 GSLGQGLAIGVGMALGLKHKKNPAFIYNSMSDGELDEGAVWEAAMGAAHHRLDNLICLID 182 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 NNQ A G S S+ + + +F +VDG D+ AV D A A I Sbjct: 183 INNQQADGPS-SKVMGFEPLADKWAAFGWHVQRVDGNDLAAVLEAFDAARNLTEAKPRVI 241 Query: 276 IIEML 280 + + L Sbjct: 242 LFDTL 246 >gi|150024812|ref|YP_001295638.1| pyruvate/branched-chain alpha-keto acid dehydrogenase (E1) component, alpha and beta subunits [Flavobacterium psychrophilum JIP02/86] gi|149771353|emb|CAL42822.1| Putative pyruvate/branched-chain alpha-keto acid dehydrogenase (E1) component, alpha and beta subunits [Flavobacterium psychrophilum JIP02/86] Length = 800 Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust. Identities = 36/182 (19%), Positives = 82/182 (45%), Gaps = 14/182 (7%) Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 +GI N + +++ G+ ++++G +E+ N A + + ++ + +++Y + Sbjct: 165 SGINQTNFSEQGNEVAWGTIGNASSSEGLFFETINAAGVLQVPMVMSVWDDEYGISVHAR 224 Query: 228 RASAQTNFS---------KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 + + N S ++ + I + V+G D + T KA R P++I Sbjct: 225 HQTTKENISEILKGFQRDQKNKGYEI--ITVNGWDYPTLVETYQKASVIAREEHVPVLIH 282 Query: 279 M--LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 + LT + +GHS S E E +N D + Q++ ++ N A+ +++ I+ Sbjct: 283 VRELT-QPQGHSTSGSHERYKNAERLEWEANFDCLRQMKLWMIENNIATAEEIETIDNQA 341 Query: 337 RK 338 +K Sbjct: 342 KK 343 >gi|298250039|ref|ZP_06973843.1| Transketolase domain protein [Ktedonobacter racemifer DSM 44963] gi|297548043|gb|EFH81910.1| Transketolase domain protein [Ktedonobacter racemifer DSM 44963] Length = 226 Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 21/119 (17%) Query: 147 FSTKNGFYGGH-------------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 F T G GGH G +G + + G+A A + ++ ++ V GDG N Sbjct: 88 FGTWEGILGGHPDRQQVPGIEISTGSLGHGLPMAVGVALALRAKKGEQRVFVLIGDGECN 147 Query: 194 QGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 +G ++E+ +A NL N+ ++ NN ++ + + +T FS +F+ VDG Sbjct: 148 EGSIWEAVMLAGQLNLANLTCILVNNHSSL---YNFSDLETKFS----AFHWQTTNVDG 199 >gi|312959843|ref|ZP_07774359.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas fluorescens WH6] gi|311286009|gb|EFQ64574.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas fluorescens WH6] Length = 943 Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ ++++ NNQ Sbjct: 338 GSVRARQDRRNDTSGEKVLPISIHGDAAFAGQGVVLETFQMSQTRGFKTGGTVHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S + T ++ P + V+G D AV AV Y K ++I+ Sbjct: 398 VGFTISNPLDARSTEYATDVAKMIQAPILHVNGDDPEAVLFVTQLAVDYRMQFKRDVVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|148978238|ref|ZP_01814756.1| alpha-ketoglutarate decarboxylase [Vibrionales bacterium SWAT-3] gi|145962539|gb|EDK27816.1| alpha-ketoglutarate decarboxylase [Vibrionales bacterium SWAT-3] Length = 938 Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 11/162 (6%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQ 196 GG++H+ F H + V +G+ A ++ +D + + GD A A QG Sbjct: 312 GGNVHL---ALAFNPSHLEIVNPVVIGSVRARQDRLGDTDGSRVLPITIHGDSAIAGQGV 368 Query: 197 VYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGM 252 V E+FN++ V + ++ NNQ TS R + T + + P V+ Sbjct: 369 VQETFNMSQARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTMYCTDIAKMVQAPIFHVNAD 428 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 429 DPEAVAFVARLALDYRNTFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|262038892|ref|ZP_06012237.1| transketolase [Leptotrichia goodfellowii F0264] gi|261747095|gb|EEY34589.1| transketolase [Leptotrichia goodfellowii F0264] Length = 269 Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A ++K +D GDG +GQ++E+ AA + L N++ +++ Sbjct: 115 GSLGQGLSVANGMALSSKIYNNDYRVYTILGDGELQEGQIWEAAMTAAHYKLDNLVAIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + VS + +FN +++DG + + +KA R KG P Sbjct: 175 YNNLQIDGKVSDVMDVYPVVDKFKAFNWNVIEIDGHNYEEIIKAFEKA----REVKGQPT 230 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 231 VIVAKTVKGKGVSF 244 >gi|123968986|ref|YP_001009844.1| N-terminal subunit of transketolase [Prochlorococcus marinus str. AS9601] gi|123199096|gb|ABM70737.1| possible N-terminal subunit of transketolase [Prochlorococcus marinus str. AS9601] Length = 288 Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 10/167 (5%) Query: 139 GKGGSM-HMFSTKNGFYGG----HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 GK GS+ H K G G G +G + + G+A A++ + + C DG N Sbjct: 107 GKAGSLFHEHPPKPGLVPGIEAATGSLGHGLPMALGMALASRILKLNFRCYAMLSDGECN 166 Query: 194 QGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 +G ++E+ +AA + N+I +I+ N++ A ++ SF ++DG Sbjct: 167 EGSIWEAAMMAASQKVENLIVIIDFNKWQATGRSKDILALDPLREKWSSFGWHTQEIDGH 226 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYRTR 298 D + D + + P I T + +G S M D N+ R Sbjct: 227 DFSQIN---DAFIEARKIKSKPKAIIANTIKGKGVSFMEDDNNWHYR 270 >gi|78044530|ref|YP_359037.1| putative transketolase, N-terminal subunit [Carboxydothermus hydrogenoformans Z-2901] gi|77996645|gb|ABB15544.1| putative transketolase, N-terminal subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 280 Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 15/159 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S G+A K RS V GDG +G V+E+ AA + L N+ +++ Sbjct: 117 GSLGQGFSTAVGMALGLKLDRSPARVYVLLGDGEIQEGIVWEAAMAAAHYKLNNLTAILD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH-KGPI 275 N + V + + SF + VDG +I + +D A R H +GP Sbjct: 177 YNGLQIDGPVQEVMNPEPVADKWRSFGFKVITVDGHNIPEIINAIDAA----RLHLEGPT 232 Query: 276 IIEMLTYRYRGHSM---------SDPANYRTREEINEMR 305 II T + +G S S P + E ++E++ Sbjct: 233 IIIAKTVKGKGVSFMENRVEWHGSAPKPEQVAEALSELQ 271 >gi|332796900|ref|YP_004458400.1| transketolase N-terminal subunit [Acidianus hospitalis W1] gi|332694635|gb|AEE94102.1| transketolase N-terminal subunit [Acidianus hospitalis W1] Length = 293 Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 5/132 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A K + + V GDG ++G+V+E+ A NL N+I IE Sbjct: 144 GSLGQGLSFGIGVATGIKMAKGNGRVFVIMGDGEQDEGEVWEAATHAVARNLDNLIAFIE 203 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N Y + S + + DG DI ++ +++A+ +A K P + Sbjct: 204 VNGYQLDAKTSEVKPKDFLPDVYKAIGWRTFSCDGHDILSIINAVEEAL---KARK-PAV 259 Query: 277 IEMLTYRYRGHS 288 I T R +G + Sbjct: 260 IFAKTLRGKGFT 271 >gi|126336723|ref|XP_001368878.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 628 Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+ + L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGEVSEGSVWEAMAFASFYKLNNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR SF + VDG + + ++ + ++ + P+ Sbjct: 183 DVNRLGQSDPAPLQHQMDVYQKRCESFGWNSIVVDGHSVEELCKAFEQ--GFDQSKQKPL 240 Query: 276 IIEMLTYRYRGHS 288 + TY+ RG S Sbjct: 241 AVIAKTYKGRGIS 253 >gi|86147661|ref|ZP_01065970.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Vibrio sp. MED222] gi|85834572|gb|EAQ52721.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Vibrio sp. MED222] Length = 939 Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 15/164 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG++H+ F H + V +G+ A + R DK + + GD A A Q Sbjct: 313 GGNVHL---ALAFNPSHLEIVNPVVIGS--VRARQDRLDDKDGSRVLPITIHGDSAIAGQ 367 Query: 195 GQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVD 250 G V E+FN++ V + ++ NNQ TS R + T + + P V+ Sbjct: 368 GVVQETFNMSQARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTMYCTDIAKMVQAPIFHVN 427 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 428 SDDPEAVAFVARLALDYRNTFKRDVVIDLVCYRRHGHNEADEPN 471 >gi|324501913|gb|ADY40846.1| 2-oxoglutarate dehydrogenase [Ascaris suum] Length = 1036 Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + +V GD A +G V E+FN+ L V I+V+ NNQ T + + + Sbjct: 415 MAIVMHGDAALCGEGVVMETFNLNDLNAYTVHGCIHVVVNNQIGFTTDPRASRSSPYCTD 474 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 G P V+ D AV + A + R K +II+++ YR +GH+ D Sbjct: 475 IGRVIGCPIFHVNSDDPEAVIFVCNVASEWRRTFKKDVIIDLVCYRRQGHNELD 528 >gi|218710211|ref|YP_002417832.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio splendidus LGP32] gi|218323230|emb|CAV19407.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio splendidus LGP32] Length = 939 Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 15/164 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG++H+ F H + V +G+ A + R DK + + GD A A Q Sbjct: 313 GGNVHL---ALAFNPSHLEIVNPVVIGS--VRARQDRLDDKDGSRVLPITIHGDSAIAGQ 367 Query: 195 GQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVD 250 G V E+FN++ V + ++ NNQ TS R + T + + P V+ Sbjct: 368 GVVQETFNMSQARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTMYCTDIAKMVQAPIFHVN 427 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 428 SDDPEAVAFVARLALDYRNTFKRDVVIDLVCYRRHGHNEADEPN 471 >gi|209520204|ref|ZP_03268975.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia sp. H160] gi|209499363|gb|EDZ99447.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia sp. H160] Length = 953 Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 16/145 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D+ + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 338 GSAKARMDRRGDEDGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P + V+G D AV T+ A+ + ++++ Sbjct: 398 IGFTTSDPRDSRSTLYCSDVVKMIEAPVLHVNGDDPEAVVLTIQMAIDFRMQFHKDVVVD 457 Query: 279 MLTYRYRGHSMSD------PANYRT 297 ++ +R GH+ D P Y+T Sbjct: 458 IVCFRKLGHNEQDTPAVTQPLMYKT 482 >gi|195575253|ref|XP_002105594.1| GD21563 [Drosophila simulans] gi|194201521|gb|EDX15097.1| GD21563 [Drosophila simulans] Length = 906 Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 10/179 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG E N+A + + V +++I NNQ T R + S Sbjct: 326 LNVILHGDAAFAGQGINQECLNMAYVPHFEVGGSLHLIVNNQVGFTTPGDRGRSTAYTSD 385 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP--AN 294 S P V+G D A+ A Y R + I I++ +R GH+ + DP N Sbjct: 386 LAKSIQAPVFHVNGDDPEALARITSLAFRYQREFRKDIFIDLNCFRRWGHNELDDPTFTN 445 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +++ S D Q +L + SE KE+ K + + A + + P Sbjct: 446 PLVYKIVHQRESVPDSYAQ---QLAKEQVLSESKAKEMRDGYMKYLGEELALAPTYQPP 501 >gi|225018397|ref|ZP_03707589.1| hypothetical protein CLOSTMETH_02344 [Clostridium methylpentosum DSM 5476] gi|224948815|gb|EEG30024.1| hypothetical protein CLOSTMETH_02344 [Clostridium methylpentosum DSM 5476] Length = 280 Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 7/163 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K GDG +G+V+E+ AA L N+I V++ Sbjct: 118 GSLGQGISAACGMALAAKLSNKQWRVFTVLGDGELEEGEVWEAAMFAAHNKLDNLIAVVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN + +S + K+ +F ++D D ++ KA + P + Sbjct: 178 NNDLQIDGRLSEVCSPEPIDKKFEAFGWEVFKIDAHDFDQIEDAFTKA---NQVQGKPAV 234 Query: 277 IEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRL 318 I + + +G S M D ++ E R +E+++K L Sbjct: 235 IIQRSIKGKGVSFMEDNVSWHGSAPNAEQRDA--ALEELKKTL 275 >gi|118470356|ref|YP_886519.1| transketolase, N- subunit [Mycobacterium smegmatis str. MC2 155] gi|118171643|gb|ABK72539.1| transketolase, N- subunit [Mycobacterium smegmatis str. MC2 155] Length = 287 Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 24/185 (12%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S+ G+A K + + K DG +GQ +E+ AA L+ +I +++ Sbjct: 111 GSLGQGLSVAAGLALGAKLQDASKFTYAVVSDGEMEEGQTWEAALFAAHHGLSKLIVLLD 170 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + + + +F VDG D+ ++A AV + P + Sbjct: 171 RNDSQVDGPTHTVTTLEPVTDKWAAFGWDVRAVDGHDVGQLRA----AVRAAQETSAPSV 226 Query: 277 IEMLTYRYRG--HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 I T+ G H + D A+ ++ + D I Q RK L+ E E Sbjct: 227 IVAKTWTLSGLDHILPDEADGHF------LKVSPDQIAQARKHLV-----------EAEK 269 Query: 335 NVRKI 339 RK+ Sbjct: 270 EARKV 274 >gi|329939733|ref|ZP_08289034.1| alpha-ketoglutarate decarboxylase [Streptomyces griseoaurantiacus M045] gi|329301303|gb|EGG45198.1| alpha-ketoglutarate decarboxylase [Streptomyces griseoaurantiacus M045] Length = 1269 Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++++ NNQ +G + + S++++ Sbjct: 684 MPVAIHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHIVINNQ--VGFTAAPESSRSSMYA 741 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD Sbjct: 742 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESD 797 >gi|153008268|ref|YP_001369483.1| 2-oxoglutarate dehydrogenase E1 component [Ochrobactrum anthropi ATCC 49188] gi|166918819|sp|A6WXF0|ODO1_OCHA4 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|151560156|gb|ABS13654.1| 2-oxoglutarate dehydrogenase, E1 subunit [Ochrobactrum anthropi ATCC 49188] Length = 1001 Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L V ++ I NNQ T+ + + + Sbjct: 398 RAKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRVAGTLHFIINNQIGFTTNPAFSRSSP 457 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + P++I+M YR GH+ D Sbjct: 458 YPSDVAKMIEAPIFHVNGDDPEAVVFAAKVATEFRMTFHKPVVIDMFCYRRFGHNEGDEP 517 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ +R++ ++ +L+ + ++ +++ R+ + + QS K P Sbjct: 518 SFTQPLMYKAIRAHKTTVQLYSDKLIAEGLIKQEEIDQMKAQWRENLETEFDAGQSYK-P 576 Query: 354 DPAE 357 + A+ Sbjct: 577 NKAD 580 >gi|21223647|ref|NP_629426.1| alpha-ketoglutarate decarboxylase [Streptomyces coelicolor A3(2)] gi|9909917|emb|CAC04496.1| putative 2-oxoglutarate dehydrogenase [Streptomyces coelicolor A3(2)] Length = 1272 Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + + S++++ Sbjct: 687 LPVAIHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAAPESSRSSMYA 744 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ +D Sbjct: 745 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNETD 800 >gi|224071349|ref|XP_002303416.1| predicted protein [Populus trichocarpa] gi|222840848|gb|EEE78395.1| predicted protein [Populus trichocarpa] Length = 692 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 65/293 (22%), Positives = 107/293 (36%), Gaps = 44/293 (15%) Query: 22 SAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF 81 S ++ +T +D +D PF LS L L E +A +Y + GG Sbjct: 40 SGEKPSTPLLDTIDYPF----------HMDNLSTQDLEQLAS--ELRADIVYSVAKTGGH 87 Query: 82 CHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGISK 138 +G + V + T D++I ++ + H + G + T G K Sbjct: 88 LSSSLGVVELSVALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPK 147 Query: 139 GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 S + F GH +S G G+A A + GDGA GQ Y Sbjct: 148 RDE------SVYDAFGAGHS--STSISAGLGMAVARDLLGKSNHVISVIGDGAMTAGQAY 199 Query: 199 ESFNIAALWNLNVIYVIENNQY----------------AMGTSVSRASAQTNFSKRGVSF 242 E+ N A + N+I ++ +N+ A+ +++++ A F K + Sbjct: 200 EAMNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSTLTKLQASAKFRKLHEAA 259 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY----RGHSMSD 291 Q+DG V A +D+ + G + E L Y GHS+ D Sbjct: 260 KGITKQIDGQ-THQVAAKVDEYARGMISASGSTLFEELGLYYIGPVDGHSIED 311 >gi|319441070|ref|ZP_07990226.1| alpha-ketoglutarate decarboxylase [Corynebacterium variabile DSM 44702] Length = 1245 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAAL---WNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A G V E+ N+A L ++V+ NNQ T+ R + + Sbjct: 657 MPILMHGDAAFTGLGIVQETINMAQLRGYTVGGTVHVVVNNQIGFTTTPDRGRSTHYATD 716 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 F+ P V+G D AV AV Y R + I+M+ YR RGH SM+ Sbjct: 717 IAKGFDAPVFHVNGDDPEAVVWVARLAVEYRRRFGKDVFIDMVCYRRRGHNESDDPSMTQ 776 Query: 292 PANYRTREEINEMRS 306 P Y E+ +RS Sbjct: 777 PELYSIIEDRPTVRS 791 >gi|289706398|ref|ZP_06502756.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Micrococcus luteus SK58] gi|289556893|gb|EFD50226.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Micrococcus luteus SK58] Length = 1252 Score = 43.5 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 10/132 (7%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG V E ++ L I+VI NNQ T ++A + + Sbjct: 677 ILVHGDAAFAGQGVVTEVLQLSQLPGYRTGGTIHVIVNNQVGFTTPPTQARSAVYSTDVA 736 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSDPA 293 + P V+G + +V A Y + ++I+++ YR RGH SM+ P Sbjct: 737 KTIQAPIFHVNGDEPESVMHVAQLAFEYRQRFNKDVVIDLVCYRRRGHNEGDDPSMTQPR 796 Query: 294 NYRTREEINEMR 305 Y E+ R Sbjct: 797 MYNLIEQKRSTR 808 >gi|289523436|ref|ZP_06440290.1| putative transketolase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503128|gb|EFD24292.1| putative transketolase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 648 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 26/193 (13%) Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 H+ + G G G +G ++ G G A A K RR + V GDG +GQV E+ IA Sbjct: 119 HVERSVPGIDWGSGNLGQGLAAGVGYALAQKKRRGEGHVFVLMGDGEQTKGQVSEARRIA 178 Query: 205 ALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV---DGMDIRAVKAT 260 A L NV +++ N + V + + + I G QV DG D + + Sbjct: 179 AKEGLDNVTALVDFNHIQISGFVEDV-MPVQYKRL---WEIDGWQVYECDGHDPSDIYSA 234 Query: 261 MDKA-------VAYCRA--HKGPIIIEMLTYRYRGHSMSDPANYRTREEINE-------- 303 + +A V +C KG +E + Y G +++ R EE+ E Sbjct: 235 LKEAYEDDGPSVVFCNTVMGKGVSFMEGIP-DYHGKALNKEQYLRAMEELGEDPSILEEA 293 Query: 304 MRSNHDPIEQVRK 316 +R+ P+ + R+ Sbjct: 294 LRARRGPLPEGRR 306 >gi|195505380|ref|XP_002099479.1| GE10922 [Drosophila yakuba] gi|194185580|gb|EDW99191.1| GE10922 [Drosophila yakuba] Length = 919 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 13/146 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG E N+A + + V +++I NNQ T R + S Sbjct: 326 LNVILHGDAAFAGQGINQECLNMAYVPHFEVGGSLHLIVNNQVGFTTPGDRGRSTAYTSD 385 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 S P V+G D A+ A Y R + I I++ +R GH + ++ Sbjct: 386 LAKSIQAPVFHVNGDDPEALARITSLAFRYQREFRKDIFIDLNCFRRWGHNELDDPTFTN 445 Query: 292 PANYR---TREEINEMRSNHDPIEQV 314 P Y+ RE + ++ + EQV Sbjct: 446 PLVYKIVHQRESVPDLYAQQLAKEQV 471 >gi|71908674|ref|YP_286261.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechloromonas aromatica RCB] gi|118595510|sp|Q47BJ0|DXS_DECAR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|71848295|gb|AAZ47791.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechloromonas aromatica RCB] Length = 618 Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYG---------GHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ G+S ++ M +GF G G +S G+A A K++ Sbjct: 84 LTGRREGMS-----TLRMHGGVSGFPKRAESPYDTFGVGHSSTSISAALGMALAAKHKGE 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ + GDGA + G +E+ N A + + +++ ++ +N+ ++ V Sbjct: 139 DRKAIAIIGDGAMSAGMAFEAMNNAGVADADMLVILNDNEMSISPPV 185 >gi|317401821|gb|EFV82433.1| 2-oxoglutarate dehydrogenase E1 component [Achromobacter xylosoxidans C54] Length = 955 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 27/183 (14%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A + RR D + V+ GD A A QG V E+ N+A ++++ NNQ Sbjct: 340 GSARARQERRGDAEGKQVLPVLVHGDAAFAGQGVVMETLNLAQTRGYGTGGTMHIVINNQ 399 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + + P V+G D AV A+ Y + ++++ Sbjct: 400 IGFTTSDPRDSRSTLYCTDVAKMIEAPVFHVNGDDPEAVVFVTKLALDYRLQFRHDVVVD 459 Query: 279 MLTYRYRGH------SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 ++ +R GH S++ P Y+ R H P ++L +K ++G L E Sbjct: 460 IVCFRKLGHNEQDTPSLTQPLMYK--------RIGHHP---GTRKLYADKLTTQGVLAEG 508 Query: 333 EMN 335 E + Sbjct: 509 EAD 511 >gi|256079086|ref|XP_002575821.1| 2-oxoglutarate dehydrogenase [Schistosoma mansoni] gi|238661072|emb|CAZ32056.1| 2-oxoglutarate dehydrogenase [Schistosoma mansoni] Length = 947 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 41/196 (20%), Positives = 81/196 (41%), Gaps = 9/196 (4%) Query: 162 AQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---I 212 A + G A ++ R D + ++ GD A + QG VYE+F+++ L + I Sbjct: 362 AVCPVAQGKTKAEQFYRGDTDGKKVMSILIHGDAAFSGQGVVYETFHLSDLPSYTTKGTI 421 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +++ NNQ T A + + N + + D +V A + Sbjct: 422 HIVVNNQIGFTTDPRMARSSPYCTDVARVTNSLILHANADDPESVMHVAKVAAEWRSEFG 481 Query: 273 GPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 ++I+++ YR GH+ D + +R +EQ K+L+ + +E + K+ Sbjct: 482 KDVVIDLVCYRRSGHNEMDEPMFTQPLMYKRIREQPTVLEQYSKKLIDSGIVTEQEFKDE 541 Query: 333 EMNVRKIINNSVEFAQ 348 +I ++ E A+ Sbjct: 542 VAKYDQICEDAYELAK 557 >gi|194383022|dbj|BAG59067.1| unnamed protein product [Homo sapiens] Length = 873 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 4/112 (3%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 256 ILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVA 315 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 N P V+ D AV A + ++++++ YR GH+ +D Sbjct: 316 RVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNETD 367 >gi|62185035|ref|YP_219820.1| alpha-ketoglutarate decarboxylase [Chlamydophila abortus S26/3] gi|62148102|emb|CAH63859.1| 2-oxoglutarate dehydrogenase E1 component [Chlamydophila abortus S26/3] Length = 908 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 39/171 (22%), Positives = 78/171 (45%), Gaps = 8/171 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + ++ GD A + QG VYE+ ++ + + +++I NN T+ R S T + + Sbjct: 321 LAILVHGDAAFSGQGVVYETLQLSQIPGYSTGGTLHIIVNNHIGF-TAQPRESRSTPYCT 379 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 IP +V+ D+ A ++ ++ +II++ YR GH+ SD + Sbjct: 380 DIAKMLGIPVFRVNAEDVVACLQAIEYSLKVREEFSCDVIIDLCCYRKYGHNESDDPSIT 439 Query: 297 TREEINEMRSNHDPIEQVRKRLLHN--KWASEGDLKEIEMNVRKIINNSVE 345 +E++ E +K LL N + S L+++E V+ ++N + Sbjct: 440 APLLYDEIKKKPTIREIYKKYLLDNYREEISADSLEKLEQGVQDVLNTEFQ 490 >gi|265754266|ref|ZP_06089455.1| transketolase [Bacteroides sp. 3_1_33FAA] gi|263234975|gb|EEZ20530.1| transketolase [Bacteroides sp. 3_1_33FAA] Length = 281 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 1/104 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A A K ++D V GDG +G +YE+ + L N++ +I+ Sbjct: 114 GALGHGLSVGVGMAIAAKMDKADYKTYVLMGDGEQGEGSIYEAAMAGNQYKLDNLVAIID 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+ + + + + R +F ++++G ++ + T Sbjct: 174 RNRLQISGTTEEVMSLESMRDRWTAFGWDVLEMNGDEMEDITRT 217 >gi|262193666|ref|YP_003264875.1| transketolase [Haliangium ochraceum DSM 14365] gi|262077013|gb|ACY12982.1| Transketolase domain protein [Haliangium ochraceum DSM 14365] Length = 288 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 1/107 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G GIA K R + V GDG N+G V+E+ +A L N+I V++ Sbjct: 121 GSLGHLLSVGMGIAMDIKLRGDNNRVFVVLGDGELNEGSVWEALLVAKAKKLDNLIPVVD 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 N + ++R F + DG A+K K Sbjct: 181 RNWFQANIRTEELIPLEPLAERFRGFGYEVHRFDGHSFPAMKDAFGK 227 >gi|229830133|ref|ZP_04456202.1| hypothetical protein GCWU000342_02240 [Shuttleworthia satelles DSM 14600] gi|229791431|gb|EEP27545.1| hypothetical protein GCWU000342_02240 [Shuttleworthia satelles DSM 14600] Length = 281 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 7/134 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A + + +D GDG +GQV+E+ A L N++ +++ Sbjct: 117 GSLGQGISVAVGMALSARLSGADYRVYTLLGDGEIEEGQVWEAAMFAGNRRLDNLVAIVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 N + ++ + ++ + +F ++V DG D ++ +A A RAHKG P Sbjct: 177 YNNLQIDGTLDQVNSPVPIPAKFEAFRWNVIEVMDGSDFDQLR----EAFAGARAHKGAP 232 Query: 275 IIIEMLTYRYRGHS 288 I M T + +G S Sbjct: 233 SCIVMHTVKGKGVS 246 >gi|209967009|ref|YP_002299924.1| transketolase, putative [Rhodospirillum centenum SW] gi|209960475|gb|ACJ01112.1| transketolase, putative [Rhodospirillum centenum SW] Length = 638 Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 12/157 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKIC-------VVCFGDGAANQGQVYESFNIAALWNLN 210 G+V SLG GI+ A +D++ V GDG +GQV+ES AA + + Sbjct: 129 GMVANTGSLGMGISKAKGMAEADRVAGRPPRRLFVLTGDGELQEGQVWESLVSAANRHSD 188 Query: 211 -VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 ++ ++++N+ T V R S + + +F M+ DG DI AV A +D +A Sbjct: 189 GIVAIVDHNKLQSDTFVRRVSDLGDLEAKFRAFGWSVMRADGHDIPAVAAALDALLAL-- 246 Query: 270 AHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRS 306 GP ++ T + RG S + R +E S Sbjct: 247 --PGPRVLIADTVKGRGVSFMEHTALRPEQEFYRFHS 281 >gi|325275372|ref|ZP_08141318.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas sp. TJI-51] gi|324099489|gb|EGB97389.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas sp. TJI-51] Length = 877 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDKI-----CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ ++++ NNQ Sbjct: 338 GSVRARQDRRNDTVGDKVLPISIHGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S + T ++ P + V+G D AV A+ Y K ++I+ Sbjct: 398 VGFTISNPLDARSTEYATDVAKMIQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|295100833|emb|CBK98378.1| 1-deoxy-D-xylulose-5-phosphate synthase [Faecalibacterium prausnitzii L2-6] Length = 627 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 16/149 (10%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF-NIAAL 206 S + F GHG +S+ GIA+A K + V GDGA G VYE NI L Sbjct: 108 SAHDAFIAGHG--NTALSVAIGIAWAKKLKGEPGHVVAIIGDGAFTGGMVYEGMNNIGKL 165 Query: 207 WNLNVIYVIENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 NL VI + +N+ ++ +V R + +K V+ + GM V G I++ Sbjct: 166 DNLLVI--LNDNKMSISHNVGALAGYLGHLRTTNGYFTAKENVNSFLNGMPVIGAPIKSA 223 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 KA+ H + E + + Y G Sbjct: 224 LQNSKKAIRRAMYHS--TMFEDMGFHYFG 250 >gi|184185498|gb|ACC68901.1| transketolase-like 1 (predicted) [Rhinolophus ferrumequinum] Length = 596 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 6/140 (4%) Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVIE 216 ++G + G+A+ KY V C GDG +++G V+E+ A+ +NL N++ + + Sbjct: 95 LLGQGLGAACGMAYTGKYFDKASYRVFCLVGDGESSEGCVWEALAFASYYNLDNLVAIFD 154 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ ++ + KR +F DG D+ A+ +A + P Sbjct: 155 VNRLGHSGTLPLELCMDIYQKRCEAFGWNTFTADGRDVEALCQVFWQAT---QVKNKPTA 211 Query: 277 IEMLTYRYRG-HSMSDPANY 295 I T++ RG S+ D N+ Sbjct: 212 IVAKTFKGRGVPSVEDAENW 231 >gi|223938992|ref|ZP_03630877.1| 2-oxoglutarate dehydrogenase, E1 subunit [bacterium Ellin514] gi|223892288|gb|EEF58764.1| 2-oxoglutarate dehydrogenase, E1 subunit [bacterium Ellin514] Length = 937 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 10/141 (7%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A +G + E+ N++ L V ++++ NNQ TS + + Sbjct: 345 RNQGMNLLIHGDAAFPGEGVIQETLNLSLLPGYAVGGTLHIVVNNQIGFTTSPKESRSSL 404 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-- 291 + P V+G D AV + A+ + K + I+M YR GH+ D Sbjct: 405 YATDVAKMLQSPIFHVNGEDPEAVAQVVHLAMEFRHTFKRDVFIDMYAYRRLGHNEGDEP 464 Query: 292 ----PANYRTREEINEMRSNH 308 P YR E+ +R + Sbjct: 465 TFTQPVLYRAIEQRKPVREGY 485 >gi|172063683|ref|YP_001811334.1| transketolase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171996200|gb|ACB67118.1| Transketolase domain protein [Burkholderia ambifaria MC40-6] Length = 289 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 2/132 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A A + S GDG +GQV+E+ AA L N+I +++ Sbjct: 129 GSIGHALSNGAGMAKAAQMAGSPFKVFTLLGDGEMQEGQVWEAALFAAHHRLSNLIAIVD 188 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N Y + V + +++ +F +VDG D+ A+ + + A K P+ Sbjct: 189 RNGYQLDGKVDDVIGIESLAEKWRAFGWETHEVDGHDLTALVPLLRRVKADPVRSK-PVC 247 Query: 277 IEMLTYRYRGHS 288 I T + +G S Sbjct: 248 IIAKTVKGKGVS 259 >gi|296104330|ref|YP_003614476.1| putative transketolase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058789|gb|ADF63527.1| putative transketolase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 281 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 15/230 (6%) Query: 62 IRRFEEKAGQLYGMGMVG-GFCHLCIGQEAVIVGMKMSLTEG-----DQMITAYREHGH- 114 IRR+ + G++ G G +G + + A GM + E D+ + + HGH Sbjct: 16 IRRYALRMGEVQGQGYIGQALGYADVLATAFTHGMNLKPDEPEWEGRDRFLLS---HGHY 72 Query: 115 ILAC--GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 +AC + + I+ E G + M + G G +G +S+G G+A Sbjct: 73 AIACYAALIEAGIIPEEELETYGSDDSRLPMSGMATYTPGMEISGGSLGQGLSIGVGMAL 132 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRAS 230 K+++S V DG ++G +E+ AA L N+I +++ N Q A G S + Sbjct: 133 GLKHKQSAAWVVNSMSDGELDEGSTWEAAMSAAHHGLSNLIVLVDINRQQADGNS-HKIL 191 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 + SF +V+G D+ A+ A D A Y I+ + L Sbjct: 192 GFEPLEDKWTSFGWYVQRVNGNDVPALVAAFDNARRYPENQPRVILCDTL 241 >gi|257095635|ref|YP_003169276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048159|gb|ACV37347.1| deoxyxylulose-5-phosphate synthase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 629 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 4/102 (3%) Query: 129 LTGRQGGISKGK--GGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ G++K + GG Y G+ +S G+A A K + + V Sbjct: 84 LTGRRAGMAKLRMHGGVSGFPKRSESRYDTFGVGHSSTSISAALGMALAAKIKGETRKVV 143 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GDGA + GQ +E+ N A + + +++ ++ +N ++ V Sbjct: 144 AIIGDGAMSAGQAFEALNNAGVADADMLVILNDNDMSISPPV 185 >gi|163760647|ref|ZP_02167728.1| putative transketolase alpha subunit protein [Hoeflea phototrophica DFL-43] gi|162282262|gb|EDQ32552.1| putative transketolase alpha subunit protein [Hoeflea phototrophica DFL-43] Length = 283 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 3/109 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G A K ++S DG +G +E+ A W L N+I +++ Sbjct: 123 GSLGQGLGIAVGAALGLKRKKSSAFVYNMLSDGELGEGSTWEAVMSAVQWKLDNLIAIVD 182 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NNQ A G ++ A A + + + +F +VDG D+ A+ D A Sbjct: 183 FNNQQADGPTLD-ALATSEEAPKWAAFGWYAQEVDGNDLTALVQAFDNA 230 >gi|163867874|ref|YP_001609078.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tribocorum CIP 105476] gi|189027767|sp|A9IQP2|DXS_BART1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|161017525|emb|CAK01083.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tribocorum CIP 105476] Length = 635 Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 4/101 (3%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 ++GG+S G + + S + F GH LG +A A K + K+ V GDGA Sbjct: 98 QEGGLS---GFTKRVESVYDPFGAGHSSTSISAGLGMAVASALKEEKKRKVIAVI-GDGA 153 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 + G YE+ N A N +I ++ +N ++ SA Sbjct: 154 MSAGMAYEAMNNAGALNARLIVILNDNDMSIAPPTGSMSAH 194 >gi|330895826|gb|EGH28114.1| transketolase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 256 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 86/218 (39%), Gaps = 11/218 (5%) Query: 70 GQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIM 126 GQ+ G G VG G L + + E +Q Y GH A + A+ I Sbjct: 2 GQVQGQGYVGQALGAADLLAVSYFHALNYRPEDPEWEQRDRFYLSIGH-YAIALYAALIE 60 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FANKYRRSDKI 182 AE+ + G S S + G I G + G GIA K + S Sbjct: 61 AEIIPLDELETYGSDDSRLPMSGMATYTPGMEITGGSLGHGLGIAVGACLGLKRKNSSAF 120 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGV 240 DG N+G +E+ A+ W L N+I +I+ NNQ A G S S A R Sbjct: 121 VYNLLSDGELNEGSTWEAAMSASHWKLDNLIAIIDVNNQQADGHS-SEVLAFEPIVDRWQ 179 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +F +VDG ++ A+ A D A + A II + Sbjct: 180 AFGWFTQRVDGNNLDALVAAFDNARQHAGAQPRVIICD 217 >gi|240013350|ref|ZP_04720263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae DGI18] gi|240015795|ref|ZP_04722335.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae FA6140] gi|240079932|ref|ZP_04724475.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae FA19] gi|240117088|ref|ZP_04731150.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae PID1] gi|240120423|ref|ZP_04733385.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae PID24-1] gi|240122725|ref|ZP_04735681.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae PID332] gi|254492945|ref|ZP_05106116.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae 1291] gi|260441301|ref|ZP_05795117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae DGI2] gi|268596072|ref|ZP_06130239.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae FA19] gi|268602775|ref|ZP_06136942.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae PID1] gi|268681324|ref|ZP_06148186.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae PID332] gi|291044657|ref|ZP_06570366.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae DGI2] gi|226511985|gb|EEH61330.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae 1291] gi|268549860|gb|EEZ44879.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae FA19] gi|268586906|gb|EEZ51582.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae PID1] gi|268621608|gb|EEZ54008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae PID332] gi|291011551|gb|EFE03547.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae DGI2] Length = 637 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGG 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|254282007|ref|ZP_04956975.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium NOR51-B] gi|219678210|gb|EED34559.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium NOR51-B] Length = 641 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 22/196 (11%) Query: 35 DIPFLEGFEVSEFNKEQELSAYRLMLL---IRRFEEKAGQLYGMGMVGGFCHLCIGQEAV 91 D P LE E + + Q L+ +L+ L +RRF L+ + GG +G + Sbjct: 11 DTPLLEALESQQLDIRQ-LTEPQLLSLADEVRRF-----LLFTVSQTGGHFGAGLGVVEL 64 Query: 92 IVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQ-GGISKGKGGSMHMF 147 + + L T D+++ ++ + H + G A T RQ GG+S S F Sbjct: 65 TIALHHVLNTPHDRIVWDVGHQTYPHKILTGRRAQM----HTMRQAGGLSGFPKRSESPF 120 Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 T F GH VS G G+A A + + V GDGA G +E+ A Sbjct: 121 DT---FGVGHS--STSVSAGMGMALAATQQGIKRRTVAVIGDGAITGGMAFEALAHAGHV 175 Query: 208 NLNVIYVIENNQYAMG 223 N++ V+ +NQ ++G Sbjct: 176 RPNLLIVLNDNQMSIG 191 >gi|84393478|ref|ZP_00992234.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Vibrio splendidus 12B01] gi|84375906|gb|EAP92797.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Vibrio splendidus 12B01] Length = 939 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 15/164 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG++H+ F H + V +G+ A + R DK + + GD A A Q Sbjct: 313 GGNVHL---ALAFNPSHLEIVNPVVIGS--VRARQDRLDDKDGSRVLPITIHGDSAIAGQ 367 Query: 195 GQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVD 250 G V E+FN++ V + ++ NNQ TS R + T + + P V+ Sbjct: 368 GVVQETFNMSQARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTMYCTDIAKMVQAPIFHVN 427 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 428 SDDPEAVAFVARLALDYRNTFKRDVVIDLVCYRRHGHNEADEPN 471 >gi|240127426|ref|ZP_04740087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae SK-93-1035] gi|268685801|ref|ZP_06152663.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae SK-93-1035] gi|268626085|gb|EEZ58485.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae SK-93-1035] Length = 637 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGG 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|240112138|ref|ZP_04726628.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae MS11] gi|240124915|ref|ZP_04737801.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae SK-92-679] gi|268598197|ref|ZP_06132364.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae MS11] gi|268683495|ref|ZP_06150357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae SK-92-679] gi|268582328|gb|EEZ47004.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae MS11] gi|268623779|gb|EEZ56179.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae SK-92-679] Length = 637 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGG 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|268537132|ref|XP_002633702.1| Hypothetical protein CBG03385 [Caenorhabditis briggsae] gi|187036609|emb|CAP24286.1| CBR-TKT-1 protein [Caenorhabditis briggsae AF16] Length = 618 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 54/109 (49%), Gaps = 2/109 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + TG+A+ KY V C GDG + +G V+E+ + A+++ L N++ ++ Sbjct: 119 GSLGQGLGVATGMAYVGKYIDKASYRVFCLLGDGESAEGSVWEAASFASIYKLDNLVAIV 178 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 + N+ + + + R +F + VDG ++ + A + A Sbjct: 179 DVNRLGQSQATALGHDVETYKARFAAFGFNAIIVDGHNVDELIAAYENA 227 >gi|91228428|ref|ZP_01262353.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio alginolyticus 12G01] gi|91188012|gb|EAS74319.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio alginolyticus 12G01] Length = 941 Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS R + T Sbjct: 350 SKVLPITIHGDSAIAGQGVVAETFNMSLARGFQVGGTVRIVINNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|254229707|ref|ZP_04923116.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio sp. Ex25] gi|262394883|ref|YP_003286737.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio sp. Ex25] gi|151937752|gb|EDN56601.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio sp. Ex25] gi|262338477|gb|ACY52272.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio sp. Ex25] Length = 941 Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS R + T Sbjct: 350 SKVLPITIHGDSAIAGQGVVAETFNMSLARGFQVGGTVRIVINNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|86742428|ref|YP_482828.1| alpha-ketoglutarate decarboxylase [Frankia sp. CcI3] gi|86569290|gb|ABD13099.1| 2-oxoglutarate dehydrogenase E1 component [Frankia sp. CcI3] Length = 1244 Score = 43.5 bits (101), Expect = 0.049, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 5/115 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG V E+ N++ L ++++ NNQ TS + + Sbjct: 654 VLVHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHLVINNQVGFTTSPDSGRSSVYATDVA 713 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 P V+G D A A Y +A ++I+++ YR RGH+ M +P+ Sbjct: 714 RMVQAPIFHVNGDDPEACVRVAALAFEYRQAFHKDVVIDLVCYRRRGHNEMDEPS 768 >gi|293397765|ref|ZP_06641971.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae F62] gi|291611711|gb|EFF40780.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae F62] Length = 637 Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGG 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|253698918|ref|YP_003020107.1| transketolase [Geobacter sp. M21] gi|251773768|gb|ACT16349.1| Transketolase domain protein [Geobacter sp. M21] Length = 274 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 7/142 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + GDG +GQ++E+ A + N+ +I+ Sbjct: 117 GSLGQGLSMANGMALGFKLDGKENRVYAVLGDGELQEGQIWEAAMAAGHYKSDNLCALID 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + VS+ + + +F +++DG D+ + + +D+A AHKG P Sbjct: 177 ANGLQIDGDVSKVMNVASIGDKFKAFGWNVIEIDGHDMGQIISALDQA----EAHKGAPT 232 Query: 276 IIEMLTYRYRG-HSMSDPANYR 296 I T + +G H + A+Y Sbjct: 233 AIVAKTVKGKGVHLFENKASYH 254 >gi|187933869|ref|YP_001887542.1| transketolase, thiamine diphosphate binding domain [Clostridium botulinum B str. Eklund 17B] gi|187722022|gb|ACD23243.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum B str. Eklund 17B] Length = 274 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + GDG +GQV+E+ AA +NL N+ ++ Sbjct: 117 GSLGQGISAAVGMALAGKLDNKNYRVYTILGDGELEEGQVWEASMSAAHYNLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + ++S K+ +F + +DG D + A ++KA + KG P Sbjct: 177 YNGLQIDGNISDVMNPAPIDKKFEAFGWNTLIIDGHDYDQILAAIEKA----KNTKGQPT 232 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 233 VIVCKTVKGKGVSF 246 >gi|39997544|ref|NP_953495.1| 2-oxoglutarate dehydrogenase E1 component [Geobacter sulfurreducens PCA] gi|39984435|gb|AAR35822.1| 2-oxoglutarate dehydrogenase, E1 component [Geobacter sulfurreducens PCA] gi|298506486|gb|ADI85209.1| 2-oxoglutarate dehydrogenase, E1 protein [Geobacter sulfurreducens KN400] Length = 894 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 14/164 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N++ L ++++ NNQ T + A + + Sbjct: 319 LPVLIHGDAAFAGQGVVAETLNLSQLEGYRTGGTLHIVINNQIGFTTVPADARSSLYATD 378 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD------ 291 P V G D A M+ A+ Y + +++E++ YR GH+ D Sbjct: 379 TAKIVAAPVFHVHGEDPEAAVHVMELALEYRQTFGRDVVVEIICYRRHGHNEGDEPYFTQ 438 Query: 292 PANY---RTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKE 331 P Y + R ++E+ ++ E V R RL A G L+E Sbjct: 439 PVMYGRIKDRPPVHELYADRLAEEGVPRDRLDAMTAAIAGRLEE 482 >gi|320322984|gb|EFW79074.1| transketolase, N-terminal subunit, putative [Pseudomonas syringae pv. glycinea str. B076] gi|330874541|gb|EGH08690.1| transketolase [Pseudomonas syringae pv. glycinea str. race 4] Length = 256 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 86/218 (39%), Gaps = 11/218 (5%) Query: 70 GQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIM 126 GQ+ G G VG G L + + E +Q Y GH A + A+ I Sbjct: 2 GQVQGQGYVGQALGAADLLAVSYFHALNYRPEDPEWEQRDRFYLSIGH-YAIALYAALIE 60 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA----FANKYRRSDKI 182 A++ + G S S + G I G + G GIA K + S Sbjct: 61 ADIIPLDELETYGSDDSRLPMSGMATYTPGMEITGGSLGHGLGIAVGACLGLKRKNSRSF 120 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGV 240 DG N+G +E+ A+ W L N+I +++ NNQ A G S S A R Sbjct: 121 VYNLLSDGELNEGSTWEAAMSASHWKLDNLIAIVDVNNQQADGHS-SEVLAFEPIVDRWQ 179 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +F +VDG D+ A+ A D A + A II + Sbjct: 180 AFGWFTQRVDGNDLNALVAAFDAARQHAGAQPRVIICD 217 >gi|213983053|ref|NP_001135687.1| oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Xenopus (Silurana) tropicalis] gi|197245679|gb|AAI68626.1| Unknown (protein for MGC:186272) [Xenopus (Silurana) tropicalis] Length = 1018 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 400 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 459 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV + A + ++++++ YR GH+ M +P Sbjct: 460 VARVVNAPIFHVNADDPEAVMYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 515 >gi|302536870|ref|ZP_07289212.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Streptomyces sp. C] gi|302445765|gb|EFL17581.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Streptomyces sp. C] Length = 1290 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A A QG V E+ N++ L ++V+ NNQ +G + + S++++ Sbjct: 704 LPLALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAAPESSRSSMYA 761 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD Sbjct: 762 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNESD 817 >gi|302387566|ref|YP_003823388.1| deoxyxylulose-5-phosphate synthase [Clostridium saccharolyticum WM1] gi|302198194|gb|ADL05765.1| deoxyxylulose-5-phosphate synthase [Clostridium saccharolyticum WM1] Length = 632 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 5/106 (4%) Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 GGIS G S + F GH +S G G+A A D V GDGA Sbjct: 94 GGIS---GFPKRKESPCDAFDTGHS--STSISAGLGLAQARDVLGEDHFVVSVIGDGALT 148 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 G YE+ N AA N N I ++ +N ++ +V S N + G Sbjct: 149 GGMAYEALNNAARMNKNFIIILNDNNMSISENVGGMSTYLNSIRTG 194 >gi|59800505|ref|YP_207217.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae FA 1090] gi|240114884|ref|ZP_04728946.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae PID18] gi|268600542|ref|ZP_06134709.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae PID18] gi|75432621|sp|Q5FAI2|DXS_NEIG1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|59717400|gb|AAW88805.1| putative 1-deoxyxylulose-5-phosphate synthase [Neisseria gonorrhoeae FA 1090] gi|268584673|gb|EEZ49349.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae PID18] Length = 637 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGG 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|310778921|ref|YP_003967254.1| transketolase subunit A [Ilyobacter polytropus DSM 2926] gi|309748244|gb|ADO82906.1| transketolase subunit A [Ilyobacter polytropus DSM 2926] Length = 272 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 1/119 (0%) Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 H + G G +G +S+G G+A A+ ++S V GDG +G V+E+ A Sbjct: 101 HAYRNIPGVELSTGSLGMGLSVGVGMALASNLKKSSYNVFVLMGDGEIQEGSVWEAAMSA 160 Query: 205 ALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 L N+ +I+ N+ V+ +R SFN +++DG D + +D Sbjct: 161 GHHKLSNLCAIIDYNKVQENGFVNEIKNLEPLGERWKSFNWNVIEIDGHDFDDIFRALD 219 >gi|148228448|ref|NP_001085695.1| MGC80496 protein [Xenopus laevis] gi|49118217|gb|AAH73213.1| MGC80496 protein [Xenopus laevis] Length = 1018 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 400 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 459 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV + A + ++++++ YR GH+ M +P Sbjct: 460 VARVVNAPIFHVNADDPEAVMYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 515 >gi|68171119|ref|ZP_00544528.1| Dehydrogenase, E1 component [Ehrlichia chaffeensis str. Sapulpa] gi|67999444|gb|EAM86084.1| Dehydrogenase, E1 component [Ehrlichia chaffeensis str. Sapulpa] Length = 912 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 7/179 (3%) Query: 184 VVCFGDGAA-NQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD + QG V E+ ++ L V++++ NNQ T + + S Sbjct: 325 VLVHGDASVIGQGVVAETLTLSNLAGYEIRGVVHIVVNNQIGFTTDPKDSRSSFYCSDVA 384 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + P V+G V A + A+ Y ++I+++ YR GH+ D + Sbjct: 385 KLIDAPVFHVNGDSPEDVVAAVKLAIEYREKFNKDVVIDIVCYRRYGHNEGDEPLFTQPV 444 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE-PDPAE 357 + + + P+ +++L+ +E + K ++ ++N EF QS+ PD A+ Sbjct: 445 MYDCIMKHKTPMTLYKEQLISESVITEEEFKILKAKFNSMLNE--EFVQSENYVPDQAD 501 >gi|303247297|ref|ZP_07333571.1| deoxyxylulose-5-phosphate synthase [Desulfovibrio fructosovorans JJ] gi|302491456|gb|EFL51344.1| deoxyxylulose-5-phosphate synthase [Desulfovibrio fructosovorans JJ] Length = 658 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 79/220 (35%), Gaps = 69/220 (31%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKY 176 LTGRQ + H T +G G G G +S G+A A Sbjct: 114 LTGRQE--------NFHTLRTLHGISGFPRPAESPYDHFGVGHSSTSISAALGMAMARDR 165 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV-------SRA 229 + D V GDG+ G YE N A W +I V+ +N+ ++ +V SR Sbjct: 166 KGEDHDVVAIIGDGSMTAGLAYEGLNQAGGWGGRLIVVLNDNEMSISKNVGALSLFLSRK 225 Query: 230 SAQ-----------------------TNFSKRG----VSFNIPGM-----------QVDG 251 Q + KRG SF PGM +DG Sbjct: 226 LNQRWVKRFKKDMENWISSFPFGGDVMGYVKRGEESFKSFFTPGMLFEAFRFNYLGPIDG 285 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 D A + + R +GP+++ +LT + RG++ ++ Sbjct: 286 HD----TARLTEVFKEVREIEGPVLVHVLTKKGRGYAPAE 321 >gi|294498408|ref|YP_003562108.1| transketolase, thiamine diphosphate binding domain (N-terminal subunit) [Bacillus megaterium QM B1551] gi|294348345|gb|ADE68674.1| transketolase, thiamine diphosphate binding domain (N-terminal subunit) [Bacillus megaterium QM B1551] Length = 277 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 1/107 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A A K D GDG +GQ++E+ A + L N++ ++ Sbjct: 118 GSLGQGLSCGVGMAIAGKRDFKDYRVFSLVGDGECQEGQIWEAAQTAVKYQLDNLVVFVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 NN+ + + K+ +F +++G + + T+D+ Sbjct: 178 NNRLQIDGFCDEIMPLQDLEKKFDAFGFETKRINGHSMEEIVETLDE 224 >gi|256395425|ref|YP_003116989.1| transketolase [Catenulispora acidiphila DSM 44928] gi|256361651|gb|ACU75148.1| Transketolase domain protein [Catenulispora acidiphila DSM 44928] Length = 283 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G ++L G A AN+Y V GDG +G V+E+ AA L+ ++ +++ Sbjct: 123 GSLGHGLALACGFALANRYAGRTSRSFVLLGDGELQEGSVWEAVIAAASLKLDRLVAIVD 182 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + + + ++R SF VDG D + +D A Sbjct: 183 RNGLQLTGATEDIAPMEPLAERWRSFGWSVRDVDGHDPALLAELLDGA 230 >gi|298293254|ref|YP_003695193.1| 2-oxoglutarate dehydrogenase, E1 subunit [Starkeya novella DSM 506] gi|296929765|gb|ADH90574.1| 2-oxoglutarate dehydrogenase, E1 subunit [Starkeya novella DSM 506] Length = 992 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 7/185 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L I+ I NNQ T + + Sbjct: 385 RTQVMPLLLHGDAAFAGQGVVAECLGLSGLKGHRTGGSIHFIINNQIGFTTYPRFSRSSP 444 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV A + + K P++++M YR GH+ D Sbjct: 445 YPSDVAKTIEAPIFHVNGDDPEAVTFAAKIATEFRQRFKKPVVVDMFCYRRFGHNEGDEP 504 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASE-GDLKEIEMNVRKIINNSVEFAQSDKE 352 + T+ + ++ H ++ R L + E G++ + + R ++ + Q+ K Sbjct: 505 AF-TQPLMYKLIKQHPTTLEIYSRKLEAEGVLEAGEIDRMRADWRSRLDTEYDAGQAYK- 562 Query: 353 PDPAE 357 P+ A+ Sbjct: 563 PNKAD 567 >gi|90023021|ref|YP_528848.1| 1-deoxy-D-xylulose-5-phosphate synthase [Saccharophagus degradans 2-40] gi|118595615|sp|Q21F93|DXS_SACD2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|89952621|gb|ABD82636.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Saccharophagus degradans 2-40] Length = 649 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 48/210 (22%), Positives = 88/210 (41%), Gaps = 25/210 (11%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 + +R T +D VD P + +ELS +L L + E LY +G GG Sbjct: 5 IPTQRPNTPLLDVVDTP----------ARLRELSEKQLPQLAKELREYL--LYTVGQTGG 52 Query: 81 FCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGH-ILACGVDASKIMAELTGRQGGI 136 +G + V + L T D+++ ++ + H IL + + +L G G Sbjct: 53 HFGAGLGVVELTVALHYVLNTPDDRLVWDVGHQTYPHKILTGRREQMSSIRQLDGLSGFP 112 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 + + S + F GH +S G+A A + + + V GDG+ G Sbjct: 113 KRSE-------SEFDTFGVGHS--STSISAALGMALAAEMTDNQQQTVAVIGDGSMTAGM 163 Query: 197 VYESFNIAALWNLNVIYVIENNQYAMGTSV 226 +E+ N AA + N++ ++ +N ++ +V Sbjct: 164 AFEALNHAAHADTNMMVILNDNNMSISKNV 193 >gi|332969881|gb|EGK08884.1| 1-deoxy-D-xylulose-5-phosphate synthase [Kingella kingae ATCC 23330] Length = 631 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + S+ F GF Y G+ + S+G G+A AN+ S Sbjct: 84 LTGR-----KNRMDSIRQFGGLAGFPKRSESEYDDFGVGHSSTSIGAALGMAVANQLSGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA GQ +E+ N A ++N++ ++ +N+ ++ +V Sbjct: 139 AARSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSISPNV 185 >gi|313669089|ref|YP_004049373.1| 1-deoxyxylulose-5-phosphate synthase [Neisseria lactamica ST-640] gi|313006551|emb|CBN88015.1| putative 1-deoxyxylulose-5-phosphate synthase [Neisseria lactamica 020-06] Length = 641 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGG 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|269966052|ref|ZP_06180143.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio alginolyticus 40B] gi|269829359|gb|EEZ83602.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio alginolyticus 40B] Length = 794 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS R + T Sbjct: 350 SKVLPITIHGDSAIAGQGVVAETFNMSLARGFQVGGTVRIVINNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|254302699|ref|ZP_04970057.1| transketolase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322891|gb|EDK88141.1| transketolase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 270 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 23/190 (12%) Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH-------GIVGAQVSLG 167 +L+ G A I A L +G SK + ++ F ++ GH GI + SLG Sbjct: 64 VLSKGHAAPAIYATLA-EKGYFSKDELMTLRKFGSR---LQGHPDMKKLPGIEISTGSLG 119 Query: 168 TGIAFANKYRRSDKI------CVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQY 220 G++ AN + KI V GDG +GQ++E+ AA + L N+ +++N Sbjct: 120 QGLSVANGMALNAKIFDENYRTYVVLGDGEIQEGQIWEAAMTAAHYKLDNLCAFLDSNNL 179 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEM 279 + +VS K+ +F +++DG D + + + KA R KG P +I Sbjct: 180 QIDGNVSEIMGVEPLDKKWEAFGWNVIKIDGHDFEQILSALAKA----RECKGKPTMIIA 235 Query: 280 LTYRYRGHSM 289 T + +G S Sbjct: 236 KTIKGKGVSF 245 >gi|295105575|emb|CBL03119.1| 1-deoxy-D-xylulose-5-phosphate synthase [Faecalibacterium prausnitzii SL3/3] Length = 627 Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF-NIAAL 206 S + F GHG +SL G+A+A K + + V GDGA G VYE NI L Sbjct: 108 SVHDAFIAGHG--NTALSLAIGMAWAKKIKHEPGLVVAVIGDGAFTGGMVYEGMNNIGGL 165 Query: 207 WNLNVIYVIENNQYAMGTSV 226 NL VI + +N+ ++ +V Sbjct: 166 DNLLVI--LNDNKMSISKNV 183 >gi|170043564|ref|XP_001849453.1| transketolase [Culex quinquefasciatus] gi|167866859|gb|EDS30242.1| transketolase [Culex quinquefasciatus] Length = 627 Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 16/170 (9%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++ G+A+ K ++D V GDG + +G V+ES + A + L N+ Sbjct: 121 GTGSLGQGVAVACGMAYVGKNIDKADYRTYVLVGDGESAEGSVWESLHFAGHYKLDNLCV 180 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV-------KATMDKAVA 266 + + N+ S + KR +F + VDG D+ + +T D+ A Sbjct: 181 IFDVNRLGQSEPTSLQHQMEVYRKRLDAFGFNAIVVDGHDVEELCKAFFEASSTKDRPTA 240 Query: 267 -YCRAHKG---PIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIE 312 + +KG P I ++ + G + D AN E + + N PI+ Sbjct: 241 IIAKTYKGKHFPKIEDL--ENWHGKPLGDSAN-TVIEHLQGLIRNAGPIQ 287 >gi|77458944|ref|YP_348450.1| transketolase subunit A [Pseudomonas fluorescens Pf0-1] gi|77382947|gb|ABA74460.1| putative transketolase [Pseudomonas fluorescens Pf0-1] Length = 282 Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 87/225 (38%), Gaps = 23/225 (10%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITA----YREHGH 114 IRR + GQ+ G G VG G L AV +S D Y GH Sbjct: 20 IRRHALRMGQVQGQGYVGQALGAADLL----AVAYFHALSYRPEDPAWEPRDRFYLSIGH 75 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA--- 171 A + A+ I AE+ + G S S + G I G + G GIA Sbjct: 76 Y-AIALYAALIEAEIIPLDELETYGSDDSRLPMSGMAAYTPGMEITGGSLGQGLGIAVGA 134 Query: 172 -FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSR 228 K + S DG N+G +E+ A+ W L N+I +++ NNQ A G S Sbjct: 135 CLGLKRKGSTSFVYNLLSDGELNEGSTWEAVMSASHWKLDNLIAIVDVNNQQADGHSSEI 194 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 S + R +F +VDG D+ A+ D A R H G Sbjct: 195 LSFEP-IVDRWKAFGWFTQRVDGNDLDALVEAFDAA----RHHPG 234 >gi|304388408|ref|ZP_07370515.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis ATCC 13091] gi|304337589|gb|EFM03751.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis ATCC 13091] Length = 635 Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+ A+K S Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMGAADKLLGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|327279037|ref|XP_003224265.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Anolis carolinensis] Length = 1020 Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 403 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 462 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV + A + ++++++ YR GH+ M +P Sbjct: 463 VARVVNAPIFHVNADDPEAVVYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 518 >gi|325185029|emb|CCA19521.1| 2oxoglutarate dehydrogenase E1 component putative [Albugo laibachii Nc14] Length = 1015 Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 3/111 (2%) Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGV 240 V+ GD + QG V E+F +AL + +++I NNQ T A + S Sbjct: 364 VLLHGDASMFQGSVREAFGFSALADYKTGGTLHLIINNQIGFTTLPKHADSAVYCSDVAK 423 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV M AV + + + I+++ YR GH+ D Sbjct: 424 ISRSPIFHVNADDPEAVVKVMRMAVEFRQTFNCDVAIDLVCYRRHGHNEQD 474 >gi|296270850|ref|YP_003653482.1| 2-oxoglutarate dehydrogenase, E1 subunit [Thermobispora bispora DSM 43833] gi|296093637|gb|ADG89589.1| 2-oxoglutarate dehydrogenase, E1 subunit [Thermobispora bispora DSM 43833] Length = 1219 Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ +++ L ++++ NNQ TS + + + + Sbjct: 635 LPILIHGDAAFAGQGVVAETLHLSQLRGYRTGGTVHIVVNNQVGFTTSPTSSRSSVYATD 694 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+G D AV A A Y +A + ++I+++ YR RGH+ +D Sbjct: 695 VARMIQAPIFHVNGDDPEAVVAVGRLAFEYRQAFRKDVVIDLVCYRRRGHNETD 748 >gi|152996812|ref|YP_001341647.1| 2-oxoglutarate dehydrogenase, E1 subunit [Marinomonas sp. MWYL1] gi|150837736|gb|ABR71712.1| 2-oxoglutarate dehydrogenase, E1 subunit [Marinomonas sp. MWYL1] Length = 945 Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQ 219 G A + RR D + + GD A A QG V E+F ++ A ++++ NNQ Sbjct: 339 GSVRARQDRRKDTTGKTVVPISIHGDAAFAGQGVVMETFQMSQTRAYRTGGTVHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 T+ S T ++ P V+G D AV A+ Y ++I+ Sbjct: 399 VGFTTNRQEDSRSTEYATDVAKMIQAPIFHVNGDDPEAVLFVTQLALDYRYEFGRDVVID 458 Query: 279 MLTYRYRGHSMSD 291 M+ YR RGH+ +D Sbjct: 459 MVCYRRRGHNETD 471 >gi|331269446|ref|YP_004395938.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum BKT015925] gi|329125996|gb|AEB75941.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum BKT015925] Length = 619 Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust. Identities = 45/190 (23%), Positives = 72/190 (37%), Gaps = 53/190 (27%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +LG A K ++ + I V+ GDGA G E+ N N+I Sbjct: 112 FETGHSSTSISAALGMARARDLKGQKHNVIAVI--GDGALTGGMAIEALNDVGDKKTNLI 169 Query: 213 YVIENNQYAMG-------TSVSRASAQTNFSKRGVSFN---------------------- 243 ++ +NQ ++G T +SR ++K FN Sbjct: 170 IILNDNQMSIGKNVGGVSTYLSRIRIDPKYNKFKSDFNDVLRKTNIGNGVADSISKIKSG 229 Query: 244 -----IPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +PGM +DG DIR + M A + KGP++I +T + +G+ Sbjct: 230 IKQILVPGMFFEEMGIKYLGPIDGHDIRELTKVMTMA----KEIKGPVLIHTITQKGKGY 285 Query: 288 SMS--DPANY 295 + DP + Sbjct: 286 KFAEKDPDRF 295 >gi|88658560|ref|YP_507628.1| alpha-ketoglutarate decarboxylase [Ehrlichia chaffeensis str. Arkansas] gi|88600017|gb|ABD45486.1| 2-oxoglutarate dehydrogenase, E1 component [Ehrlichia chaffeensis str. Arkansas] Length = 912 Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust. Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 7/179 (3%) Query: 184 VVCFGDGAA-NQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD + QG V E+ ++ L V++++ NNQ T + + S Sbjct: 325 VLVHGDASVIGQGVVAETLTLSNLAGYEIRGVVHIVVNNQIGFTTDPKDSRSSFYCSDVA 384 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + P V+G V A + A+ Y ++I+++ YR GH+ D + Sbjct: 385 KLIDAPVFHVNGDSPEDVVAAVKLAIEYREKFNKDVVIDIVCYRRYGHNEGDEPLFTQPV 444 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE-PDPAE 357 + + + P+ +++L+ +E + K ++ ++N EF QS+ PD A+ Sbjct: 445 MYDCIMKHKTPMTLYKEQLISESVITEEEFKILKAKFNSMLNE--EFVQSENYVPDQAD 501 >gi|53803992|ref|YP_114385.1| 2-oxoglutarate dehydrogenase E1 component [Methylococcus capsulatus str. Bath] gi|53757753|gb|AAU92044.1| 2-oxoglutarate dehydrogenase, E1 component [Methylococcus capsulatus str. Bath] Length = 937 Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N+A A I+++ NNQ TS + T + Sbjct: 331 VPVLIHGDAAFAGQGVVMETLNMAETRAYTTGGTIHIVINNQIGFTTSNPFDARSTLYCT 390 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + P V+G D AV AV Y + ++I++L YR GH+ +D Sbjct: 391 DVANMVQAPVFHVNGDDPEAVLYVTRLAVDYRMKFRRDVVIDLLCYRRHGHNEAD 445 >gi|319780729|ref|YP_004140205.1| 2-oxoglutarate dehydrogenase E1 subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166617|gb|ADV10155.1| 2-oxoglutarate dehydrogenase, E1 subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 995 Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG + E ++ L V ++ I NNQ T+ + + Sbjct: 392 RAKVLPLLLHGDAAFAGQGVIAEILGLSGLRGHRVAGTLHFIINNQIGFTTNPRFSRSSP 451 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A+ + P++++M YR GH+ D Sbjct: 452 YPSDVAKMIEAPIFHVNGDDPEAVVHATKVAIEFRMKFFKPVVVDMFCYRRFGHNEGDEP 511 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + +R++ ++ RL+ ++ +L +++ + R + + E Q K P Sbjct: 512 AFTQPIMYRNIRNHKTTVQIYGDRLIAEGHLTQAELDQLKADWRAHLESEWEVGQHYK-P 570 Query: 354 DPAE 357 + A+ Sbjct: 571 NKAD 574 >gi|254520569|ref|ZP_05132625.1| transketolase [Clostridium sp. 7_2_43FAA] gi|226914318|gb|EEH99519.1| transketolase [Clostridium sp. 7_2_43FAA] Length = 274 Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 5/140 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G++ A K D GDG +GQV+E+ AA + L N+ I+ Sbjct: 117 GSLGQGISVAVGMSLAGKIDNKDYRVYALLGDGELEEGQVWEAAMSAAHYKLDNLTAFID 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + +++ + K+ +F + +DG DI + ++KA C+ P + Sbjct: 177 FNGLQIDGDITKVMNPSPIDKKFEAFGWNVLVIDGHDIDEILNAIEKA-KNCKGK--PTV 233 Query: 277 IEMLTYRYRGHS-MSDPANY 295 + T + +G S M + A++ Sbjct: 234 VICNTIKGKGVSFMENQASW 253 >gi|160945193|ref|ZP_02092419.1| hypothetical protein FAEPRAM212_02712 [Faecalibacterium prausnitzii M21/2] gi|158442924|gb|EDP19929.1| hypothetical protein FAEPRAM212_02712 [Faecalibacterium prausnitzii M21/2] Length = 627 Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF-NIAAL 206 S + F GHG +SL G+A+A K + + V GDGA G VYE NI L Sbjct: 108 SVHDAFIAGHG--NTALSLAIGMAWAKKIKHEPGLVVAVIGDGAFTGGMVYEGMNNIGGL 165 Query: 207 WNLNVIYVIENNQYAMGTSV 226 NL VI + +N+ ++ +V Sbjct: 166 DNLLVI--LNDNKMSISKNV 183 >gi|299135441|ref|ZP_07028631.1| 2-oxoglutarate dehydrogenase, E1 subunit [Afipia sp. 1NLS2] gi|298589849|gb|EFI50054.1| 2-oxoglutarate dehydrogenase, E1 subunit [Afipia sp. 1NLS2] Length = 980 Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 4/168 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E F ++ L ++ I NNQ T + + S Sbjct: 384 LPLLMHGDAAFAGQGVVAECFALSDLKGYRTGGSLHFIVNNQIGFTTYPRYSRSSPYPSD 443 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P V+G D AV AV + + P++I+M YR GH+ D + Sbjct: 444 VAKMIDAPIFHVNGDDPEAVVFAAKVAVEFRQKFHKPVVIDMFCYRRHGHNEGDEPAFTQ 503 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 ++ ++ ++ KRL+ + +EG++ + + + R ++ +E Sbjct: 504 PVMYQKIAAHPSTLDIYSKRLIADGVVTEGEVDKAKADWRARLDAELE 551 >gi|304404182|ref|ZP_07385844.1| Transketolase [Paenibacillus curdlanolyticus YK9] gi|304347160|gb|EFM12992.1| Transketolase [Paenibacillus curdlanolyticus YK9] Length = 633 Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI-E 216 G +G +S+G G A A++ D V GDG N+G ++E+ +A+ L + VI + Sbjct: 474 GSLGHGLSIGAGFALADRLAGRDSRTFVVLGDGECNEGAIWEAALVASSQQLRGLRVIVD 533 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N + S S + +F ++ DG D+ + A +D Sbjct: 534 CNGWQGFGRTDELSPLAALSDKWRAFGWEVVETDGHDLTKLTAALD 579 >gi|251779750|ref|ZP_04822670.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084065|gb|EES49955.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 586 Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 26/177 (14%) Query: 129 LTGRQGG-ISKGKGGSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I+ + S+ ++++N F GH +SL G+A A +R+ + Sbjct: 83 LTGRKNAFINPEQYKSVTGYTSQNESEHDFFTVGH--TSTSISLACGLAKARDVKRNTEN 140 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS------------VSRAS 230 + GDG+ + G+ YE N A+ N+I ++ +N ++ + + Sbjct: 141 IIAIIGDGSLSGGEAYEGLNNASASGKNIIILVNDNDMSIAENHGGLYQNLALLRKTNGK 200 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 A+ NF K + F+ ++ DG DI ++ T K + P+++ + T + +G+ Sbjct: 201 AENNFFK-SLGFDYHYVK-DGNDIESLIETFSK----VKDTDHPVVVHIHTVKGKGY 251 >gi|332666205|ref|YP_004448993.1| 2-oxoglutarate dehydrogenase, E1 subunit [Haliscomenobacter hydrossis DSM 1100] gi|332335019|gb|AEE52120.1| 2-oxoglutarate dehydrogenase, E1 subunit [Haliscomenobacter hydrossis DSM 1100] Length = 917 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 4/142 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V+E ++ L N + + NNQ T A + T + Sbjct: 334 LPILIHGDAAVAGQGIVFEVIQMSKLKGYNTGGTFHFVINNQIGFTTDFEDARSSTYCTG 393 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P V+G D A+ ++ A+ + + + I+M+ YR GH+ D + Sbjct: 394 VASVVSAPVFHVNGDDPEAILYAVEMAIEFRQEFNTDVFIDMVCYRKHGHNEGDDPMFTQ 453 Query: 298 REEINEMRSNHDPIEQVRKRLL 319 + + + +P E + LL Sbjct: 454 PDLYEAINVHPNPREIYMQELL 475 >gi|321468640|gb|EFX79624.1| hypothetical protein DAPPUDRAFT_197428 [Daphnia pulex] Length = 1035 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 33/175 (18%), Positives = 75/175 (42%), Gaps = 4/175 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A + QG VYE+F ++ L + I+++ NNQ T + + + Sbjct: 422 MSILLHGDAAFSGQGIVYETFTLSDLPDYTTRGTIHIVANNQIGFTTDPRHSRSSPYCTD 481 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV A + +++++++YR GH+ D + Sbjct: 482 VARVVNAPIFHVNADDPEAVMHVCKVAAEWRATFHKDVVVDLVSYRRGGHNEIDEPMFTQ 541 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 +++R +++ +L+ ++ ++ ++ KI + AQ + + Sbjct: 542 PLMYSKIRKMKSVMDKYSAKLIEEGTVTKEEVDDVRNKYEKICEEAYVKAQKETQ 596 >gi|294787642|ref|ZP_06752886.1| 1-deoxy-D-xylulose-5-phosphate synthase [Simonsiella muelleri ATCC 29453] gi|294483935|gb|EFG31618.1| 1-deoxy-D-xylulose-5-phosphate synthase [Simonsiella muelleri ATCC 29453] Length = 630 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 4/102 (3%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT--GIAFANKYRRSDKICV 184 LTGR+ +S + GG Y G+ + S+G G+A A+K +D V Sbjct: 83 LTGRKNRMSSIRQYGGLAGFPKRSESQYDDFGVGHSSTSIGAALGMAVADKLLGNDARSV 142 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GDGA GQ +E+ N A + N++ ++ +N+ ++ +V Sbjct: 143 AIIGDGAMTAGQAFEALNCAGDMDANLLVILNDNEMSISPNV 184 >gi|261868315|ref|YP_003256237.1| transketolase, N- subunit [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413647|gb|ACX83018.1| transketolase, N- subunit [Aggregatibacter actinomycetemcomitans D11S-1] Length = 274 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 9/116 (7%) Query: 158 GIVGAQVSLGTGIAFANKYR--RSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G +S+ GIA +++ R + C+V GDG N+GQ +E+F A NL N+ + Sbjct: 115 GSLGQGISIAAGIALSHQLRGMPNRTFCIV--GDGELNEGQCWEAFQFIAHRNLTNLFVI 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI----RAVKATMDKAVA 266 ++ N+ + ++ + + +F V+G DI R + AT + +A Sbjct: 173 VDYNKLQLDGCLTDIINPFSLQDKFAAFGFVVETVNGDDIDALCRVLSATPTRPLA 228 >gi|17539652|ref|NP_501878.1| hypothetical protein F01G10.1 [Caenorhabditis elegans] gi|3875549|emb|CAB02889.1| C. elegans protein F01G10.1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 618 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 7/132 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + TG+A+ KY V C GDG + +G V+E+ A+++ L N++ ++ Sbjct: 119 GSLGQGLGVATGMAYVGKYIDKASYRVFCLLGDGESAEGSVWEAAAFASIYKLDNLVAIV 178 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 + N+ + S + R +F + V+G ++ + A + A R+ KG P Sbjct: 179 DVNRLGQSQATSLGHDVETYKARFAAFGFNAIIVNGHNVDELLAAYETA----RSTKGKP 234 Query: 275 IIIEMLTYRYRG 286 I T + +G Sbjct: 235 TAIIAKTLKGKG 246 >gi|262373550|ref|ZP_06066828.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter junii SH205] gi|262311303|gb|EEY92389.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter junii SH205] Length = 631 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKN-----GFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ I+ + KGG + F ++ F GH +S G G+A A +Y++ Sbjct: 93 LTGRRERITTIRSKGG-LAAFPARDESDFDTFGVGHS--STAISAGLGMALARRYQQKPC 149 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A N ++I V+ +N ++ S Sbjct: 150 EVVAIIGDGAMTAGMAFEAMNDAVAHNADLIVVLNDNDMSISCST 194 >gi|146328207|emb|CAM58123.1| 2-oxoglutarate dehydrogenase complex [uncultured marine microorganism] Length = 959 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + I V+ GD A + QG V E+F ++ I+++ NNQ TS + + T Sbjct: 353 RQEVIPVLIHGDAAFSAQGVVTETFQMSQTNGFRTGGTIHIVINNQIGFTTSRLQDARST 412 Query: 234 NF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 + S P V+G D A A+ Y + K ++I+++ YR GH+ +D Sbjct: 413 PYCSDVAKMIEAPVFHVNGDDPEAALFVTRLALQYRQKFKKDVVIDLVCYRRHGHNEADE 472 Query: 292 PA 293 PA Sbjct: 473 PA 474 >gi|27363640|ref|NP_759168.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio vulnificus CMCP6] gi|27359756|gb|AAO08695.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Vibrio vulnificus CMCP6] Length = 941 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + V+ NNQ TS R + T Sbjct: 350 SKVLPITIHGDSAIAGQGVVAETFNMSQARGFCVGGTVRVVVNNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|322707674|gb|EFY99252.1| 2-oxoglutarate dehydrogenase E1 component [Metarhizium anisopliae ARSEF 23] Length = 1049 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 17/197 (8%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE +L + I+++ NNQ T A + + Sbjct: 426 VLLHGDAAFAAQGIVYECLGFHSLPAFSTGGTIHLVVNNQIGFTTDPRFARSTAYCTDIA 485 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+ D+ AV A + + ++I+++ YR GH+ +D ++ Sbjct: 486 KAIDAPVFHVNADDVEAVNFVCQLAADWRAEFQHDVVIDLICYRKHGHNETDQPSFTQPL 545 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII----NNSVEFAQSDKE--- 352 ++ I+ +LL ++ D++E + V ++ + S ++ + KE Sbjct: 546 MYKRIQQKEPQIDVYVNKLLREGTFTKEDIEEHKQWVWGMLEESFDKSKDYTPTSKEWTT 605 Query: 353 ------PDPAELYSDIL 363 P EL ++IL Sbjct: 606 SAWNGFKSPKELATEIL 622 >gi|323139035|ref|ZP_08074094.1| Transketolase domain-containing protein [Methylocystis sp. ATCC 49242] gi|322395695|gb|EFX98237.1| Transketolase domain-containing protein [Methylocystis sp. ATCC 49242] Length = 276 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 1/107 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +++ TG+A A K R + GDG ++G +E+ AA +L N++ +I+ Sbjct: 118 GALGHGLNVATGMALAAKRGRENWRAFALLGDGECDEGSTWEAAMFAAHHSLDNLVAIID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 N+ SV+ A F+ + +F ++DG D + D+ Sbjct: 178 YNKLQSLASVADTLALEPFADKWRAFGWAVEEIDGHDHSQLLDAFDR 224 >gi|239944234|ref|ZP_04696171.1| alpha-ketoglutarate decarboxylase [Streptomyces roseosporus NRRL 15998] gi|239990690|ref|ZP_04711354.1| alpha-ketoglutarate decarboxylase [Streptomyces roseosporus NRRL 11379] gi|291447706|ref|ZP_06587096.1| alpha-ketoglutarate decarboxylase [Streptomyces roseosporus NRRL 15998] gi|291350653|gb|EFE77557.1| alpha-ketoglutarate decarboxylase [Streptomyces roseosporus NRRL 15998] Length = 1275 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + + S++++ Sbjct: 690 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAAPESSRSSMYA 747 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P + V+G D AV A + +A ++I+++ YR RGH+ D Sbjct: 748 TDVARMIEAPIIHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNEGD 803 >gi|160931782|ref|ZP_02079175.1| hypothetical protein CLOLEP_00613 [Clostridium leptum DSM 753] gi|156869119|gb|EDO62491.1| hypothetical protein CLOLEP_00613 [Clostridium leptum DSM 753] Length = 622 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 28/177 (15%) Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH---- 157 GDQ++ + HGH A+ I A L GR G + K + F K Y GH Sbjct: 66 GDQLVVS---HGHT------AAGIYAAL-GRMGFVEPEK--VVAGFRRKGSPYEGHPSLQ 113 Query: 158 --------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G +S+G G A A + + D V GDG ++GQ+ E+ A L Sbjct: 114 VPGISWCSGALGQGLSVGCGFAAAARQQGKDSRIYVVMGDGEQSKGQLSEAREFAVSHGL 173 Query: 210 NVIYVI--ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + + N Q A G+ + Q R + + QV+G D A+ + +A Sbjct: 174 NRLTAVIDYNRQQASGSLENILPQQIAAKYRAAGWTVE--QVNGHDFSALYQALKRA 228 >gi|156401404|ref|XP_001639281.1| predicted protein [Nematostella vectensis] gi|156226408|gb|EDO47218.1| predicted protein [Nematostella vectensis] Length = 624 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G +S G+A+ K+ V C GDG + +G V+E+ + A+ + L N++ Sbjct: 121 GTGSLGQGLSCACGMAYMGKHIDKASYRVFCLLGDGESAEGAVWEAMSFASFYKLDNLVA 180 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 + + N+ + + +R +F + +DG D+ AV Sbjct: 181 IFDVNRLGQSQPTALQHKMDVYRQRAEAFGWNAIVIDGHDVEAV 224 >gi|239982262|ref|ZP_04704786.1| alpha-ketoglutarate decarboxylase [Streptomyces albus J1074] gi|291454107|ref|ZP_06593497.1| alpha-ketoglutarate decarboxylase [Streptomyces albus J1074] gi|291357056|gb|EFE83958.1| alpha-ketoglutarate decarboxylase [Streptomyces albus J1074] Length = 1259 Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++++ NNQ +G + + S++++ Sbjct: 674 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHIVINNQ--VGFTAAPESSRSSMYA 731 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD Sbjct: 732 TDVARMIEAPIFHVNGDDPEAVVRVGRLAFEFRQAFNKDVVIDLICYRRRGHNESD 787 >gi|322694072|gb|EFY85912.1| putative oxoglutarate dehydrogenase precursor [Metarhizium acridum CQMa 102] Length = 1049 Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust. Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 17/197 (8%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE +L + I+++ NNQ T A + + Sbjct: 426 VLLHGDAAFAAQGIVYECLGFHSLPAFSTGGTIHLVVNNQIGFTTDPRFARSTAYCTDIA 485 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+ D+ AV A + + ++I+++ YR GH+ +D ++ Sbjct: 486 KAIDAPVFHVNADDVEAVNFVCQLAADWRAEFQHDVVIDLICYRKHGHNETDQPSFTQPL 545 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII----NNSVEFAQSDKE--- 352 ++ I+ +LL ++ D++E + V ++ + S ++ + KE Sbjct: 546 MYKRIQQKEPQIDVYVNKLLREGTFTKEDIEEHKQWVWGMLEESFDKSKDYTPTSKEWTT 605 Query: 353 ------PDPAELYSDIL 363 P EL ++IL Sbjct: 606 SAWNGFKSPKELATEIL 622 >gi|254452503|ref|ZP_05065940.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Octadecabacter antarcticus 238] gi|198266909|gb|EDY91179.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Octadecabacter antarcticus 238] Length = 986 Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust. Identities = 37/188 (19%), Positives = 81/188 (43%), Gaps = 5/188 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R+ + ++ GD A A QG V E F ++ L ++++ NNQ T+ + Sbjct: 377 NDKSRTQSMAILLHGDAAFAGQGVVAEGFGLSGLRGHRTGGTMHIVVNNQIGFTTAPHFS 436 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D AV A + + ++++++ YR GH+ Sbjct: 437 RSSPYPTDIALMVEAPIFHVNGDDPEAVVHAARVATEFRQKFHKDVVLDIICYRRFGHNE 496 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + +++ + RL+ + EG+++ ++ + ++ E A + Sbjct: 497 GDEPMFTNPLMYKKIKQQKTTLTLYTDRLVKDGLVPEGEIEGMKEEFQAYLSAEFE-AGT 555 Query: 350 DKEPDPAE 357 D +P+ A+ Sbjct: 556 DYKPNKAD 563 >gi|37679216|ref|NP_933825.1| alpha-ketoglutarate decarboxylase [Vibrio vulnificus YJ016] gi|320157041|ref|YP_004189420.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio vulnificus MO6-24/O] gi|37197959|dbj|BAC93796.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Vibrio vulnificus YJ016] gi|319932353|gb|ADV87217.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio vulnificus MO6-24/O] Length = 941 Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + V+ NNQ TS R + T Sbjct: 350 SKVLPITIHGDSAIAGQGVVAETFNMSQARGFCVGGTVRVVVNNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|329945160|ref|ZP_08293028.1| Transketolase, thiamine diphosphate binding domain protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328529359|gb|EGF56274.1| Transketolase, thiamine diphosphate binding domain protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 274 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +SL G A A KY D V GDG +GQV+E+ ++ +L NV +++ Sbjct: 120 GSLGQGLSLANGAALAAKYDLLDSRYYVMLGDGEIQEGQVWEAAMTSSDHDLDNVCAILD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + V + + + +F + +DG +++ V + +A Sbjct: 180 ANSIQLDGPVDSVKSLGDIDAKWRAFGWHVIDIDGHNMQEVDEALTQA 227 >gi|187776667|ref|ZP_02993140.1| hypothetical protein CLOSPO_00182 [Clostridium sporogenes ATCC 15579] gi|187775326|gb|EDU39128.1| hypothetical protein CLOSPO_00182 [Clostridium sporogenes ATCC 15579] Length = 274 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +GQV+E+ AA + L N+ ++ Sbjct: 117 GSLGQGISTAVGMALAGKLDERDYRVYALLGDGELEEGQVWEATMAAAHYKLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + S + + + +FN +++DG D A+ ++ A Sbjct: 177 YNGLQIDGPCSEVMSAEPIADKFKAFNWNVIEIDGHDFNAILNAIESA 224 >gi|326936285|ref|XP_003214186.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like, partial [Meleagris gallopavo] Length = 870 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 5/114 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 401 ILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVA 460 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV + A + ++++++ YR GH+ M +P Sbjct: 461 RVVNAPIFHVNADDPEAVVYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 514 >gi|312890612|ref|ZP_07750147.1| transketolase subunit A [Mucilaginibacter paludis DSM 18603] gi|311296911|gb|EFQ74045.1| transketolase subunit A [Mucilaginibacter paludis DSM 18603] Length = 274 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 1/102 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K + D GDG +G +E+ A+ + L N+ +I+ Sbjct: 114 GALGHGLPIAAGVALAAKLDKKDYRVFTLLGDGELPEGSNWEAALTASHYKLDNLCAIID 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 NN+ + + + + SF QVDG DI A++ Sbjct: 174 NNKLQITGTNAEVCNTDPLDAKFESFGWAVKQVDGHDIHALR 215 >gi|257464763|ref|ZP_05629134.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus minor 202] gi|257450423|gb|EEV24466.1| 2-oxoglutarate dehydrogenase E1 component [Actinobacillus minor 202] Length = 937 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG + E+ N+A V I ++ NNQ TS + T F + Sbjct: 355 LAITVHGDSAVTGQGVMQETLNMANARGYTVGGTIRIVINNQIGFTTSNPNDTRSTEFCT 414 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P + V+G D AV AV Y K I I++++YR GH+ +D Sbjct: 415 DIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRTKFKRDIFIDLISYRRHGHNEAD 469 >gi|225011299|ref|ZP_03701755.1| deoxyxylulose-5-phosphate synthase [Flavobacteria bacterium MS024-3C] gi|225004555|gb|EEG42521.1| deoxyxylulose-5-phosphate synthase [Flavobacteria bacterium MS024-3C] Length = 644 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 33/189 (17%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC-----VVCFGDGAANQGQVYESFN 202 S + F GH G LG +A A + ++D+ +V GD A G E N Sbjct: 122 SRYDAFGVGHSSTGVSAGLGMALA-ALETEKTDQTALNRDHIVVVGDAAIASGMALEGLN 180 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSR-------------------ASAQTNFSKRGVSFN 243 A N++ ++ +NQ + +V A A NF + F Sbjct: 181 HAGATKANLLVILNDNQMGIDPAVGALKQHFKKLVGPKDHNNAMDAKATPNFFT-ALGFA 239 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYRTREEI 301 G+ VDG D+ + AT+ KA+ +A KGP ++ + T + +G + +D Y + Sbjct: 240 YTGV-VDGHDLPTLIATL-KAL---KAQKGPRLLHIKTTKGKGLPLAEADQVTYHAPGKF 294 Query: 302 NEMRSNHDP 310 N +P Sbjct: 295 NAQTGQRNP 303 >gi|319642331|ref|ZP_07996989.1| transketolase [Bacteroides sp. 3_1_40A] gi|317386054|gb|EFV66975.1| transketolase [Bacteroides sp. 3_1_40A] Length = 281 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 4/132 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A A K ++D V GDG +G +YE+ + L N++ +I+ Sbjct: 114 GALGHGLSVGVGMAMAAKMDKADYKTYVLMGDGEQGEGSIYEAAMAGNQYKLDNLVAIID 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + + + + R +F ++++G ++ + T +++ Y +K P + Sbjct: 174 RNRLQISGTTEEVMSLESMRDRWTAFGWDVLEMNGDEMEDIIRTF-RSIDYT--NKKPHL 230 Query: 277 IEMLTYRYRGHS 288 + T + +G S Sbjct: 231 LISHTTKGKGVS 242 >gi|240949074|ref|ZP_04753425.1| alpha-ketoglutarate decarboxylase [Actinobacillus minor NM305] gi|240296547|gb|EER47172.1| alpha-ketoglutarate decarboxylase [Actinobacillus minor NM305] Length = 937 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG + E+ N+A V I ++ NNQ TS + T F + Sbjct: 355 LAITVHGDSAVTGQGVMQETLNMANARGYTVGGTIRIVINNQIGFTTSNPNDTRSTEFCT 414 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P + V+G D AV AV Y K I I++++YR GH+ +D Sbjct: 415 DIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRTKFKRDIFIDLISYRRHGHNEAD 469 >gi|326390386|ref|ZP_08211944.1| Transketolase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] gi|325993504|gb|EGD51938.1| Transketolase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] Length = 273 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + V GDG +GQ++E+ AA + L N+ +++ Sbjct: 115 GSLGQGLSAANGMALAGKLDKKGYRVYVILGDGELQEGQIWEAAMTAAHYKLDNLTAILD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + +++ +F +++DG D + DKA+ +A KG P Sbjct: 175 FNGLQIDGPNREVKNIEPVNEKFKAFGWHVIEIDGHDFDQI----DKAIEEAKATKGKPT 230 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 231 LIIAHTIKGKGVSF 244 >gi|168007322|ref|XP_001756357.1| 1-deoxyxylulose 5-phosphate synthase [Physcomitrella patens subsp. patens] gi|162692396|gb|EDQ78753.1| 1-deoxyxylulose 5-phosphate synthase [Physcomitrella patens subsp. patens] Length = 729 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ G MH +G G G G +S G G+A + Sbjct: 162 ILTGRRGKMHTLRQTDGLSGFVKRAESEYDAFGAGHSSTSISAGLGMAVGRDLKGKKNNV 221 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA GQ YE+ N A + N+I ++ +N+ Sbjct: 222 IAVIGDGAMTAGQAYEAMNNAGYLDCNMIVILNDNK 257 >gi|332981069|ref|YP_004462510.1| transketolase subunit A [Mahella australiensis 50-1 BON] gi|332698747|gb|AEE95688.1| transketolase subunit A [Mahella australiensis 50-1 BON] Length = 274 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 4/143 (2%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G +S+G G+A K D+ V GDG +GQ++E+ A+ + N Sbjct: 113 GVEANTGSLGQGLSIGLGMALGLKLDNIDRKVYVIVGDGEIAEGQIWEAAMAASNFKADN 172 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +I +++NN+ ++ + SF ++++G D+ + +D+A Sbjct: 173 LIAILDNNELQATGPIAERFNTNPLIPKWESFGWNVIEINGHDMGQIIDALDEA---DNV 229 Query: 271 HKGPIIIEMLTYRYRGHSMSDPA 293 P II T + +G S ++ A Sbjct: 230 KGKPTIIVAHTIKGKGISFAENA 252 >gi|320589923|gb|EFX02379.1| alpha-ketoglutarate dehydrogenase complex subunit [Grosmannia clavigera kw1407] Length = 1050 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 9/179 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG VYE +L + I+++ NNQ T A + + Sbjct: 426 MAVLLHGDAALAAQGVVYECLGFRSLPAFSTGGTIHLVVNNQIGFTTDPRFARSTPYCTD 485 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + + P V+ D+ AV A + K +II+++ YR GH+ +D ++ T Sbjct: 486 IAKANDAPVFHVNADDVEAVNFVSQLAADWRAEFKQDVIIDLVCYRKYGHNETDQPSF-T 544 Query: 298 REEINEMRSNHDP-IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 + + + H+P I+ +LL ++ D+ E + V ++ +S F+QS KE P Sbjct: 545 QPLMYKRIQVHEPQIDIYVDQLLKEGTFTKEDIDEHKKWVWGMLEDS--FSQS-KEYQP 600 >gi|224080694|ref|XP_002195399.1| PREDICTED: oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Taeniopygia guttata] Length = 1016 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 399 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 458 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV + A + ++++++ YR GH+ M +P Sbjct: 459 VARVVNAPIFHVNADDPEAVVYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 514 >gi|302037848|ref|YP_003798170.1| transketolase [Candidatus Nitrospira defluvii] gi|300605912|emb|CBK42245.1| Transketolase [Candidatus Nitrospira defluvii] Length = 628 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 5/134 (3%) Query: 158 GIVGAQVSLGTGIAF-ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G G+AF A ++D V GDG + +G V+E+ +A L N+ ++ Sbjct: 125 GSLGQGLPAGVGLAFNAKSIDKTDYRTYVLMGDGESVEGSVWEAAEVARHAALDNLCAIV 184 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + R F + VDG DI A+ A ++A R P Sbjct: 185 DVNRLGQSDPTMLQHDMEAYRARWAGFGWHAIVVDGHDIGALVAAFEEA---ARTKGRPT 241 Query: 276 IIEMLTYRYRGHSM 289 ++ T++ RG S Sbjct: 242 VLLAKTFKGRGISF 255 >gi|325983214|ref|YP_004295616.1| deoxyxylulose-5-phosphate synthase [Nitrosomonas sp. AL212] gi|325532733|gb|ADZ27454.1| deoxyxylulose-5-phosphate synthase [Nitrosomonas sp. AL212] Length = 614 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G++K + G S + F H +S G+A A + R+D+ Sbjct: 82 LTGRRNGMNKLRMQDGLAGFPRRDESEYDAFGTAHS--STSISAALGMAVAAQLNRTDRR 139 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + GDGA + G +E+ N A + + N++ ++ +N ++ V Sbjct: 140 AIAIIGDGAMSAGMAFEALNNAGVMDANLLVILNDNDMSISRPV 183 >gi|21593831|gb|AAM65798.1| 1-D-deoxyxylulose 5-phosphate synthase, putative [Arabidopsis thaliana] Length = 628 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 46/198 (23%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ G M NG G G G +S G G+A + + Sbjct: 131 ILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSV 190 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY----------------AMGTSVS 227 V GDGA GQ YE+ N A + N+I ++ +N+ A+ ++S Sbjct: 191 VSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALS 250 Query: 228 ---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK--GPII 276 R ++ T F + G + P VDG +I + + ++ ++ K GP++ Sbjct: 251 RLQSNRGMIRETSSTLFEELGFHYVGP---VDGHNIDDLVSILET----LKSTKTIGPVL 303 Query: 277 IEMLTYRYRGHSMSDPAN 294 I ++T + RG+ ++ A+ Sbjct: 304 IHVVTEKGRGYPYAERAD 321 >gi|260424649|ref|ZP_05732808.2| transketolase [Dialister invisus DSM 15470] gi|260402688|gb|EEW96235.1| transketolase [Dialister invisus DSM 15470] Length = 278 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 6/131 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G S G+A A K +D GDG +GQ++E+ AA + L+ + I+ Sbjct: 122 GSLGQGFSAACGMALAAKMDHADWRVYTILGDGELEEGQIWEAAMYAAHYKLDHLTAFID 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + +++ + K+ +F + V+G ++ A + A+ R KG P Sbjct: 182 NNGLQIDGAITDVMSSLPIDKKFSAFGWHVITVNGHNM----AELHNAIEEARNIKGKPT 237 Query: 276 IIEMLTYRYRG 286 +I M T + +G Sbjct: 238 MIIMKTVKGKG 248 >gi|229589337|ref|YP_002871456.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas fluorescens SBW25] gi|229361203|emb|CAY48067.1| 2-oxoglutarate dehydrogenase E1 component [Pseudomonas fluorescens SBW25] Length = 943 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ ++++ NNQ Sbjct: 338 GSVRARQDRRNDTTGEKVLPISIHGDAAFAGQGVVLETFQMSQTRGFKTGGTVHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S + T ++ P + V+G D AV A+ Y K ++I+ Sbjct: 398 VGFTISNPLDARSTEYATDVAKMIQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVID 457 Query: 279 MLTYRYRGHSMSD 291 ++ YR RGH+ +D Sbjct: 458 LVCYRRRGHNEAD 470 >gi|242310455|ref|ZP_04809610.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pullorum MIT 98-5489] gi|239522853|gb|EEQ62719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pullorum MIT 98-5489] Length = 622 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 13/156 (8%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG C+G +I+ M + D I +++ + H L G D + + + G G Sbjct: 43 GGHLSSCLGAVELIIAMHCVFDSPNDPFIFDVSHQAYAHKLLTGRWDDFESLRQTNGISG 102 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH +SLG G+A A K +S + VV GDGA + Sbjct: 103 YTKPQE-------SKYDYFIAGHS--STSISLGVGVAKAFKLNQSQNLPVVLIGDGAMSA 153 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 G YE+ N ++ ++ +N+ ++ + S Sbjct: 154 GLAYEALNELGDRKYPMVIILNDNEMSIAEPIGAIS 189 >gi|254386774|ref|ZP_05002065.1| alpha-ketoglutarate decarboxylase [Streptomyces sp. Mg1] gi|194345610|gb|EDX26576.1| alpha-ketoglutarate decarboxylase [Streptomyces sp. Mg1] Length = 1298 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A A QG V E+ N++ L ++V+ NNQ +G + + S++++ Sbjct: 709 LPLALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAAPESSRSSMYA 766 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + +A ++I+++ YR RGH+ SD Sbjct: 767 TDVARMIEAPIFHVNGDDPEAVVRIARLAFEFRQAFNKDVVIDLICYRRRGHNESD 822 >gi|71897293|ref|NP_001026553.1| 2-oxoglutarate dehydrogenase, mitochondrial [Gallus gallus] gi|53133714|emb|CAG32186.1| hypothetical protein RCJMB04_19j12 [Gallus gallus] Length = 1016 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 399 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 458 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV + A + ++++++ YR GH+ M +P Sbjct: 459 VARVVNAPIFHVNADDPEAVVYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 514 >gi|83815605|ref|YP_445299.1| alpha-ketoglutarate decarboxylase [Salinibacter ruber DSM 13855] gi|83756999|gb|ABC45112.1| 2-oxoglutarate dehydrogenase, E1 component [Salinibacter ruber DSM 13855] Length = 1243 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 7/132 (5%) Query: 182 ICVVCFGD-GAANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD G A QG V E+ N++ L ++++ NNQ T A + T + Sbjct: 656 MPLLIHGDAGFAGQGVVAETLNLSKLRGYTTGGTVHLVINNQIGFTTPPGDARSSTYATD 715 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P V+G D A Y + ++I+M+ YR GH+ D + Sbjct: 716 LARAIEAPIFHVNGDDPETCVRIARLAFEYRQRFNKDVVIDMMCYRVHGHNEGDEPTFTQ 775 Query: 298 R---EEINEMRS 306 E+I E RS Sbjct: 776 PLLYEKIEEKRS 787 >gi|124504330|gb|AAI28551.1| OGDH protein [Homo sapiens] Length = 640 Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 310 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 369 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 370 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 425 >gi|194336286|ref|YP_002018080.1| Transketolase domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194308763|gb|ACF43463.1| Transketolase domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 303 Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 7/147 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G A + SD GDG +GQ++E+ A+ + L N+I +++ Sbjct: 136 GSLGQGLSSAVGAALGLRIDGSDNDVFCLMGDGECQEGQIWEAAMSASHYKLANIIGIVD 195 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N + V+ F+ + SF DG D+ V T++K A ++ P + Sbjct: 196 HNNLQIDGEVTSIMNVEPFADKWRSFGWDVYHCDGNDMEDVVCTVEKIKASDNRYR-PSV 254 Query: 277 IEMLTYRYRG-----HSMSDPANYRTR 298 + T +G SM D +N+ + Sbjct: 255 VLATTIMGKGVHFFEGSMPDKSNWHGK 281 >gi|254417786|ref|ZP_05031510.1| 2-oxoglutarate dehydrogenase, E1 component [Brevundimonas sp. BAL3] gi|196183963|gb|EDX78939.1| 2-oxoglutarate dehydrogenase, E1 component [Brevundimonas sp. BAL3] Length = 1004 Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 9/162 (5%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG V E F + L ++ + NNQ TS + + Sbjct: 399 RSKVVPLLIHGDAAFAGQGVVAECFALMGLKGYRTGGTLHFVINNQIGFTTSPRNSRSSP 458 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV A Y + +++M YR GH+ D Sbjct: 459 YPSDVALMVQAPIFHVNGDDPEAVVFAAKVATEYRQKFHKDAVVDMFCYRRFGHNEGDDP 518 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 + +++R+ E +RL+ +EG L + E++ Sbjct: 519 TFTQPLMYSKIRAQPSTRELYSQRLV-----AEGVLTQAEVD 555 >gi|150002956|ref|YP_001297700.1| transketolase, N-terminal subunit [Bacteroides vulgatus ATCC 8482] gi|149931380|gb|ABR38078.1| transketolase, N-terminal subunit [Bacteroides vulgatus ATCC 8482] Length = 281 Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust. Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 4/132 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A A K ++D V GDG +G +YE+ + L N++ +I+ Sbjct: 114 GALGHGLSVGVGMAMAAKMDKADYKTYVLMGDGEQGEGSIYEAAMAGNQYKLDNLVAIID 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + + + + R +F ++++G ++ + T +++ Y +K P + Sbjct: 174 RNRLQISGTTEEVMSLESMRDRWTAFGWDVLEMNGDEMEDIIRTF-RSIDYT--NKKPHL 230 Query: 277 IEMLTYRYRGHS 288 + T + +G S Sbjct: 231 LISHTTKGKGVS 242 >gi|296274453|ref|YP_003657084.1| transketolase domain-containing protein [Arcobacter nitrofigilis DSM 7299] gi|296098627|gb|ADG94577.1| Transketolase domain protein [Arcobacter nitrofigilis DSM 7299] Length = 275 Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 3/128 (2%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G+ +G +G + +G+GIA A K ++ ++ VV GDG N+G +E+ A L N Sbjct: 110 GYETVNGSLGHGLGVGSGIAVALKTKQKEENVVVLTGDGELNEGSNWEAIMFAPQQKLDN 169 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCR 269 +++ N+ +M + + + +FN +V DG +I V T+++A+ R Sbjct: 170 FTLIVDYNKVSMLDFSKNIINLNSLNAKFEAFNWKVYEVLDGHNIEEVYNTLNEAIN-NR 228 Query: 270 AHKGPIII 277 +K ++I Sbjct: 229 DNKPKVVI 236 >gi|302381583|ref|YP_003817406.1| 2-oxoglutarate dehydrogenase, E1 subunit [Brevundimonas subvibrioides ATCC 15264] gi|302192211|gb|ADK99782.1| 2-oxoglutarate dehydrogenase, E1 subunit [Brevundimonas subvibrioides ATCC 15264] Length = 998 Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 4/146 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG V E F + L ++ + NNQ TS + + Sbjct: 397 RSKVMPLLIHGDAAFAGQGVVAECFALMGLKGYRTGGTMHFVINNQIGFTTSPRNSRSSP 456 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV A + + K ++++M YR GH+ D Sbjct: 457 YPSDVALMVQAPIFHVNGDDPEAVVFAAKVATEFRQKFKKDVVVDMFCYRRFGHNEGDDP 516 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLL 319 + +++RS E +RL+ Sbjct: 517 TFTQPVMYSKIRSLPSTREIYSRRLV 542 >gi|330950854|gb|EGH51114.1| transketolase [Pseudomonas syringae Cit 7] Length = 173 Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust. Identities = 50/158 (31%), Positives = 68/158 (43%), Gaps = 18/158 (11%) Query: 156 GHGIVGAQVSLGTGIA----FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G I G + G GIA K + S DG N+G +E+ A+ W L N Sbjct: 7 GMEITGGSLGHGLGIAVGACLGLKRKNSRSFVYNLLSDGELNEGSTWEAAMSASHWKLDN 66 Query: 211 VIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 +I +I+ NNQ A G S S A R +F +VDG D+ A+ A D A R Sbjct: 67 LIAIIDVNNQQADGHS-SEVLAFEPIVDRWQAFGWFTQRVDGNDLDALVAAFDNA----R 121 Query: 270 AHKG--PIIIEMLTYRYRGHSMSDPANYRTREEINEMR 305 H G P +I T +G A TRE+ + +R Sbjct: 122 QHDGTQPRVIICDTKMGKG-----VAFLETREKTHFIR 154 >gi|148231573|ref|NP_001083614.1| 2-oxoglutarate dehydrogenase, mitochondrial precursor [Xenopus laevis] gi|49115318|gb|AAH73298.1| Ogdh protein [Xenopus laevis] Length = 1021 Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 403 MAILLHGDAAFAGQGIVYETFHLSDLPSHTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 462 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV + A + ++++++ YR GH+ M +P Sbjct: 463 VARVVNAPIFHVNADDPEAVMYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 518 >gi|326391939|ref|ZP_08213446.1| Transketolase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] gi|325992027|gb|EGD50512.1| Transketolase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] Length = 234 Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + V GDG +GQ++E+ AA + L N+ +++ Sbjct: 76 GSLGQGLSAANGMALAGKLDKKGYRVYVILGDGELQEGQIWEAAMTAAHYKLDNLTAILD 135 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + +++ +F +++DG D + DKA+ +A KG P Sbjct: 136 FNGLQIDGPNREVKNIEPVNEKFKAFGWHVIEIDGHDFDQI----DKAIEEAKATKGKPT 191 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 192 LIIAHTIKGKGVSF 205 >gi|294776614|ref|ZP_06742083.1| transketolase, thiamine diphosphate binding domain protein [Bacteroides vulgatus PC510] gi|294449529|gb|EFG18060.1| transketolase, thiamine diphosphate binding domain protein [Bacteroides vulgatus PC510] Length = 292 Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust. Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 4/132 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A A K ++D V GDG +G +YE+ + L N++ +I+ Sbjct: 125 GALGHGLSVGVGMAMAAKMDKADYKTYVLMGDGEQGEGSIYEAAMAGNQYKLDNLVAIID 184 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + + + + R +F ++++G ++ + T +++ Y +K P + Sbjct: 185 RNRLQISGTTEEVMSLESMRDRWTAFGWDVLEMNGDEMEDIIRTF-RSIDYT--NKKPHL 241 Query: 277 IEMLTYRYRGHS 288 + T + +G S Sbjct: 242 LISHTTKGKGVS 253 >gi|291167152|gb|EFE29198.1| transketolase, N- subunit [Filifactor alocis ATCC 35896] Length = 271 Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust. Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A + K + D V GDG +GQ++E+ AA + L N++ +++ Sbjct: 116 GSLGQGLSAGVGMALSAKIHKQDYRVFVLTGDGEIEEGQIWEAAMSAAQFKLDNLVAIVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + + + +++ +F ++V+G D + A +A Sbjct: 176 NNNLQIDGELEEVMSPYPIAEKFQAFGWHVIEVNGHDYDELFAAYKEA 223 >gi|209518280|ref|ZP_03267106.1| Transketolase domain protein [Burkholderia sp. H160] gi|209501300|gb|EEA01330.1| Transketolase domain protein [Burkholderia sp. H160] Length = 283 Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 3/121 (2%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + S F DG ++G ++E AA Sbjct: 108 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRKGSRSFVYTLFSDGELDEGAIWEGLLSAA 167 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 W L N+I +++ NNQ A G S ++ A + +F +V+G DI AVK D Sbjct: 168 HWKLDNLIAMVDVNNQQADGPS-TQIMAFEPLVPKLEAFGWYVQRVNGNDIDAVKTAFDN 226 Query: 264 A 264 A Sbjct: 227 A 227 >gi|163734167|ref|ZP_02141608.1| alpha-ketoglutarate dehydrogenase [Roseobacter litoralis Och 149] gi|161392703|gb|EDQ17031.1| alpha-ketoglutarate dehydrogenase [Roseobacter litoralis Och 149] Length = 986 Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust. Identities = 37/188 (19%), Positives = 81/188 (43%), Gaps = 5/188 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R+ + ++ GD A A QG V E F ++ L ++++ NNQ T+ + Sbjct: 379 NDPDRTSVMPILLHGDAAFAGQGVVAECFALSGLRGHRTGGTMHIVVNNQIGFTTAPHFS 438 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D AV A + + +++++ YR GH+ Sbjct: 439 RSSPYPTDNALVVESPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVLDIFCYRRFGHNE 498 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + +++ + + +RL+ + EG++++++ + +N E A Sbjct: 499 GDEPMFTNPMMYKKIKGHKTTLSLYTERLVKDGLIPEGEIEDMKAAFQAYMNEEFE-AGK 557 Query: 350 DKEPDPAE 357 + P+ A+ Sbjct: 558 EYRPNKAD 565 >gi|320008597|gb|ADW03447.1| 2-oxoglutarate dehydrogenase, E1 subunit [Streptomyces flavogriseus ATCC 33331] Length = 1283 Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + + S++++ Sbjct: 698 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAAPESSRSSMYA 755 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P + V+G D AV A Y + ++I+++ YR RGH+ D Sbjct: 756 TDVARMIEAPIIHVNGDDPEAVVRVARLAFEYRQTFNKDVVIDLICYRRRGHNEGD 811 >gi|260559918|ref|ZP_05832097.1| transketolase [Enterococcus faecium C68] gi|260074142|gb|EEW62465.1| transketolase [Enterococcus faecium C68] Length = 587 Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 7/99 (7%) Query: 129 LTGRQGGISKG-----KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 LTGR+ G KG G S S + F GH +SL TG+A A ++ Sbjct: 85 LTGRKNGFEKGHYREVSGYSNQHESKHDYFTVGH--TSTSISLATGLAKARDLKKESGNV 142 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V GDG+ + G +E N + N+I ++ +N+ ++ Sbjct: 143 VAFIGDGSLSGGLAFEGLNNGGVLQSNLIVLVNDNEMSI 181 >gi|298206987|ref|YP_003715166.1| 2-oxoglutarate dehydrogenase, E1 component [Croceibacter atlanticus HTCC2559] gi|83849621|gb|EAP87489.1| 2-oxoglutarate dehydrogenase, E1 component [Croceibacter atlanticus HTCC2559] Length = 920 Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%) Query: 160 VGAQVSLGTGIAFANKYRRSD---KICVVCFGDGA-ANQGQVYESFNIAAL--WNLN-VI 212 VGA V G A +++ + D + +V GD A A QG VYE ++ L + N I Sbjct: 312 VGAVVE-GITRAKQDRHHKDDFSKVLPIVVHGDAAIAGQGIVYEIVQMSQLDGYKTNGTI 370 Query: 213 YVIENNQYAMGTSV--SRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 +++ NNQ T+ R+S T+ +K +S P + V+ D AV M A+ + Sbjct: 371 HIVVNNQIGFTTNYLDGRSSTYCTDVAKVTLS---PVLHVNADDAEAVVHAMLFALDFRM 427 Query: 270 AHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 K + I++L YR GH+ D + + + + +P+E ++L + + Sbjct: 428 RFKRDVFIDLLGYRKYGHNEGDEPRFTQPKLYKAISKHKNPLEIYAEKLKSQGVIDDSYV 487 Query: 330 KEIEMNVRKIINNSVE 345 ++E + + + ++E Sbjct: 488 TKLEQDYKNKLEENLE 503 >gi|325972088|ref|YP_004248279.1| transketolase [Spirochaeta sp. Buddy] gi|324027326|gb|ADY14085.1| Transketolase [Spirochaeta sp. Buddy] Length = 273 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 6/136 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A+AN+ + D GDG + +GQ +E+ A+ + L ++I + Sbjct: 119 GSLGQGLSAACGLAYANRIDKKDAYVYAVIGDGESQEGQNWEAAMFASHYKLSHLIAFTD 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN+ + + + + SF +VDG ++ A M+ A+ + K P Sbjct: 179 NNKMQIDGLTDDIMSLGDLELKWKSFGWYTQRVDGHNLEA----METAIEQAKNQKNLPS 234 Query: 276 IIEMLTYRYRGHSMSD 291 +I + T + +G S + Sbjct: 235 MIILDTIKGKGASFCE 250 >gi|194903775|ref|XP_001980936.1| GG11729 [Drosophila erecta] gi|190652639|gb|EDV49894.1| GG11729 [Drosophila erecta] Length = 626 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 2/101 (1%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++G G+A+ K + ++D V GDG + +G ++ES + A + L N+ Sbjct: 120 GTGSLGQGVAVGAGMAYVGKNFDKADYRTYVVVGDGESAEGSIWESLHFAGHYKLDNLCV 179 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + + N+ + S + R +F + VDG D+ Sbjct: 180 IFDVNRLGQSEATSLQHKLDVYRDRLEAFGFNAVVVDGHDV 220 >gi|294507171|ref|YP_003571229.1| 2-oxoglutarate dehydrogenase E1 component [Salinibacter ruber M8] gi|294343499|emb|CBH24277.1| 2-oxoglutarate dehydrogenase E1 component [Salinibacter ruber M8] Length = 1243 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 7/132 (5%) Query: 182 ICVVCFGD-GAANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD G A QG V E+ N++ L ++++ NNQ T A + T + Sbjct: 656 MPLLIHGDAGFAGQGVVAETLNLSKLRGYTTGGTVHLVINNQIGFTTPPGDARSSTYATD 715 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P V+G D A Y + ++I+M+ YR GH+ D + Sbjct: 716 LARAIEAPIFHVNGDDPETCVRIARLAFEYRQRFNKDVVIDMMCYRVHGHNEGDEPTFTQ 775 Query: 298 R---EEINEMRS 306 E+I E RS Sbjct: 776 PLLYEKIEEKRS 787 >gi|256751094|ref|ZP_05491976.1| Transketolase domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|256750000|gb|EEU63022.1| Transketolase domain protein [Thermoanaerobacter ethanolicus CCSD1] Length = 252 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + V GDG +GQ++E+ AA + L N+ +++ Sbjct: 96 GSLGQGLSAANGMALAGKLDKKGYRVYVILGDGELQEGQIWEAAMTAAHYKLDNLTAILD 155 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + +++ +F +++DG D+ + DKA+ +A KG P Sbjct: 156 FNGLQIDGPNREVKNIEPVNEKFKAFGWHVIEIDGHDLDQI----DKAIEDAKATKGKPT 211 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 212 LIIAHTIKGKGVSF 225 >gi|218283010|ref|ZP_03489112.1| hypothetical protein EUBIFOR_01698 [Eubacterium biforme DSM 3989] gi|218216204|gb|EEC89742.1| hypothetical protein EUBIFOR_01698 [Eubacterium biforme DSM 3989] Length = 280 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 2/109 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S G+A NK+ + + C GDG +GQV+E+ AA + L N+ V+ Sbjct: 122 GSLGQGISCAVGMAIVNKHIDKNTHRIYCLLGDGECEEGQVWEACMAAAHYKLDNLCAVL 181 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 + N + ++ + F+ + SF + V+G D ++ ++A Sbjct: 182 DYNHLQIDGNIDDVISPEPFASKFESFGWNVLDVNGHDFYELRNAFEQA 230 >gi|326332886|ref|ZP_08199143.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Nocardioidaceae bacterium Broad-1] gi|325949244|gb|EGD41327.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Nocardioidaceae bacterium Broad-1] Length = 1136 Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 8/120 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV--SRASAQTNF 235 + ++ GD A A QG V E+ N++ L ++++ NNQ TS SR+S Sbjct: 562 LPLLVHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHLVINNQVGFTTSPGSSRSSLYATD 621 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 R V P V+G D A A Y +A ++I+++ YR RGH+ D ++ Sbjct: 622 VARMV--QAPIFHVNGDDPEACVRVARLAFEYRQAFNKDVVIDLICYRRRGHNEGDDPSF 679 >gi|254456478|ref|ZP_05069907.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Candidatus Pelagibacter sp. HTCC7211] gi|207083480|gb|EDZ60906.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Candidatus Pelagibacter sp. HTCC7211] Length = 969 Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 10/186 (5%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA---FANKYRRSDKICVVCFGDGA-ANQGQ 196 G S+H+ T N H V LG A F R+ I ++ GD A A QG Sbjct: 331 GNSVHVSLTDNP---SHLEAVNPVVLGQTRAKQYFHKDKERNKVIPILIHGDAAFAGQGV 387 Query: 197 VYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 V E F ++ L N I++I NNQ TS A + S + P + +G D Sbjct: 388 VAECFAMSGLPGHNTGGTIHIIVNNQIGFTTSPRFARSSPYPSDIAKMVDAPIIHANGDD 447 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 AV A + ++++++ YR GH+ D ++ ++RS+ + Sbjct: 448 PEAVVYAARIATEFRLKFNRDVVVDLICYRRFGHNEGDEPSFTQPLMYEKIRSHPSTTKV 507 Query: 314 VRKRLL 319 K+L+ Sbjct: 508 YGKKLI 513 >gi|186510290|ref|NP_850620.2| 1-deoxy-D-xylulose-5-phosphate synthase [Arabidopsis thaliana] gi|332642995|gb|AEE76516.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana] Length = 641 Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 42/196 (21%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ G M NG G G G +S G G+A + + Sbjct: 143 ILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSV 202 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY----------------AMGTSVS 227 V GDGA GQ YE+ N A + N+I ++ +N+ A+ ++S Sbjct: 203 VSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALS 262 Query: 228 ---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 R ++ T F + G + P VDG +I + + ++ + GP++I Sbjct: 263 RLQSNCGMIRETSSTLFEELGFHYVGP---VDGHNIDDLVSILETLKS--TKTIGPVLIH 317 Query: 279 MLTYRYRGHSMSDPAN 294 ++T + RG+ ++ A+ Sbjct: 318 VVTEKGRGYPYAERAD 333 >gi|110640009|ref|YP_680219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cytophaga hutchinsonii ATCC 33406] gi|118595509|sp|Q11NY7|DXS_CYTH3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|110282690|gb|ABG60876.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cytophaga hutchinsonii ATCC 33406] Length = 636 Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 12/103 (11%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ + H T NG G G G +S G+A A++Y++ ++ Sbjct: 84 ILTGRMENFHTNRTYNGLSGFPKRSESPYDTFGVGHSSTSISAALGMAVASQYQKDNRQH 143 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + GDGA G +E+ N A + N N++ V+ +N A+ +V Sbjct: 144 IAVIGDGALTGGMAFEAMNHAGVTNSNLLIVLNDNCMAIDPNV 186 >gi|326801300|ref|YP_004319119.1| transketolase [Sphingobacterium sp. 21] gi|326552064|gb|ADZ80449.1| Transketolase [Sphingobacterium sp. 21] Length = 281 Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 4/126 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G + A K DK+ V GDG +GQV+E+ A + N+I I+ Sbjct: 119 GSLGQGLSVAIGASRAKKLNADDKLVYVLMGDGELQEGQVWEAAMYAPHNKVDNLIATID 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + R + N + +F ++ G D+ + T+ +A + R KG P+ Sbjct: 179 LNGQQIDGPTERVLSLGNLKAKWEAFGWDVLEAKGNDMAQLIETLTEAKS--RTGKGKPV 236 Query: 276 IIEMLT 281 +I M T Sbjct: 237 MILMHT 242 >gi|312380681|gb|EFR26611.1| hypothetical protein AND_07198 [Anopheles darlingi] Length = 2724 Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 2/101 (1%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G +G V++ G+A+ K ++D V GDG + +G ++ES + A + LN + V Sbjct: 121 GTGSLGQGVAVACGMAYIGKNLDKADYRTYVLVGDGESAEGSIWESLHFAGYYKLNNLCV 180 Query: 215 I-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 I + N+ S + KR +F + VDG D+ Sbjct: 181 IFDVNRLGQSEPTSLQHQMEVYRKRLDAFGFNAIVVDGHDV 221 >gi|82186507|sp|Q6P6Z8|ODO1_XENLA RecName: Full=2-oxoglutarate dehydrogenase, mitochondrial; AltName: Full=2-oxoglutarate dehydrogenase complex component E1; Short=OGDC-E1; AltName: Full=Alpha-ketoglutarate dehydrogenase; Flags: Precursor gi|38303923|gb|AAH61938.1| Ogdh protein [Xenopus laevis] Length = 1021 Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 403 MAILLHGDAAFAGQGIVYETFHLSDLPSHTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 462 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV + A + ++++++ YR GH+ M +P Sbjct: 463 VARVVNAPIFHVNADDPEAVMYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 518 >gi|51970458|dbj|BAD43921.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Arabidopsis thaliana] Length = 629 Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 42/196 (21%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ G M NG G G G +S G G+A + + Sbjct: 131 ILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSV 190 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY----------------AMGTSVS 227 V GDGA GQ YE+ N A + N+I ++ +N+ A+ ++S Sbjct: 191 VSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALS 250 Query: 228 ---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 R ++ T F + G + P VDG +I + + ++ + GP++I Sbjct: 251 RLQSNCGMIRETSSTLFEELGFHYVGP---VDGHNIDDLVSILETLKS--TKTIGPVLIH 305 Query: 279 MLTYRYRGHSMSDPAN 294 ++T + RG+ ++ A+ Sbjct: 306 VVTEKGRGYPYAERAD 321 >gi|69245916|ref|ZP_00603709.1| Transketolase, central region:Transketolase, C terminal [Enterococcus faecium DO] gi|257878332|ref|ZP_05657985.1| transketolase [Enterococcus faecium 1,230,933] gi|257880888|ref|ZP_05660541.1| transketolase [Enterococcus faecium 1,231,502] gi|257889468|ref|ZP_05669121.1| transketolase [Enterococcus faecium 1,231,410] gi|257892590|ref|ZP_05672243.1| transketolase [Enterococcus faecium 1,231,408] gi|258616146|ref|ZP_05713916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium DO] gi|293560563|ref|ZP_06677053.1| 1-deoxy-d-xylulose-5-phosphate synthase [Enterococcus faecium E1162] gi|293569954|ref|ZP_06681041.1| 1-deoxy-d-xylulose-5-phosphate synthase [Enterococcus faecium E1071] gi|294622442|ref|ZP_06701466.1| 1-deoxy-d-xylulose-5-phosphate synthase [Enterococcus faecium U0317] gi|314938873|ref|ZP_07846142.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium TX0133a04] gi|314941913|ref|ZP_07848776.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium TX0133C] gi|314948991|ref|ZP_07852355.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium TX0082] gi|314953198|ref|ZP_07856144.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium TX0133A] gi|314993903|ref|ZP_07859235.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium TX0133B] gi|314997192|ref|ZP_07862176.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium TX0133a01] gi|68195527|gb|EAN09970.1| Transketolase, central region:Transketolase, C terminal [Enterococcus faecium DO] gi|257812560|gb|EEV41318.1| transketolase [Enterococcus faecium 1,230,933] gi|257816546|gb|EEV43874.1| transketolase [Enterococcus faecium 1,231,502] gi|257825828|gb|EEV52454.1| transketolase [Enterococcus faecium 1,231,410] gi|257828969|gb|EEV55576.1| transketolase [Enterococcus faecium 1,231,408] gi|291587702|gb|EFF19579.1| 1-deoxy-d-xylulose-5-phosphate synthase [Enterococcus faecium E1071] gi|291598086|gb|EFF29194.1| 1-deoxy-d-xylulose-5-phosphate synthase [Enterococcus faecium U0317] gi|291605530|gb|EFF34974.1| 1-deoxy-d-xylulose-5-phosphate synthase [Enterococcus faecium E1162] gi|313588713|gb|EFR67558.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium TX0133a01] gi|313591654|gb|EFR70499.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium TX0133B] gi|313594741|gb|EFR73586.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium TX0133A] gi|313599300|gb|EFR78145.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium TX0133C] gi|313641812|gb|EFS06392.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium TX0133a04] gi|313644580|gb|EFS09160.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium TX0082] Length = 587 Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 7/99 (7%) Query: 129 LTGRQGGISKG-----KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 LTGR+ G KG G S S + F GH +SL TG+A A ++ Sbjct: 85 LTGRKNGFEKGHYREVSGYSNQHESKHDYFTVGH--TSTSISLATGLAKARDLKKESGNV 142 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V GDG+ + G +E N + N+I ++ +N+ ++ Sbjct: 143 VAFIGDGSLSGGLAFEGLNNGGVLQSNLIVLVNDNEMSI 181 >gi|332292165|ref|YP_004430774.1| deoxyxylulose-5-phosphate synthase [Krokinobacter diaphorus 4H-3-7-5] gi|332170251|gb|AEE19506.1| deoxyxylulose-5-phosphate synthase [Krokinobacter diaphorus 4H-3-7-5] Length = 592 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 44/204 (21%), Positives = 91/204 (44%), Gaps = 24/204 (11%) Query: 100 TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 T D +I ++ +GH + G K + ++GGIS G M S + F GH Sbjct: 69 TPEDNLIWDVGHQAYGHKILTG---RKDIFHTNRQKGGIS---GFPNRMESVYDTFGTGH 122 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 +LG +A K ++ D+ + GD + G +E N A + N N++ ++ + Sbjct: 123 SSTSISAALGMAMAATLKGQK-DRHHIAVIGDASIASGMAFEGLNHAGVTNANLLVILND 181 Query: 218 NQYAMG----------TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 N + T+V + +A+ + ++F G +DG D+ + T++ Sbjct: 182 NAIGIDPSVGALKKYLTNVKKGTAREDNIFEALNFKYFG-PIDGHDLPKLLGTLEA---- 236 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSD 291 + +GP + ++T + +G ++++ Sbjct: 237 LKKVEGPKFLHVITTKGKGLALAE 260 >gi|258621146|ref|ZP_05716180.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio mimicus VM573] gi|258626221|ref|ZP_05721069.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio mimicus VM603] gi|262166197|ref|ZP_06033934.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio mimicus VM223] gi|262170923|ref|ZP_06038601.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio mimicus MB-451] gi|258581576|gb|EEW06477.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio mimicus VM603] gi|258586534|gb|EEW11249.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio mimicus VM573] gi|261891999|gb|EEY37985.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio mimicus MB-451] gi|262025913|gb|EEY44581.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio mimicus VM223] Length = 936 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+FN++ V + ++ NNQ TS R + T + + Sbjct: 353 LPITVHGDSAIAGQGVVAETFNMSQARGFYVGGTVRIVVNNQVGFTTSNPRDTRSTMYCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+ D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 413 DIAKMVQAPIFHVNSDDPEAVAFVTRLALDYRNEFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|209694425|ref|YP_002262353.1| 2-oxoglutarate dehydrogenase E1 component [Aliivibrio salmonicida LFI1238] gi|208008376|emb|CAQ78531.1| 2-oxoglutarate dehydrogenase E1 component [Aliivibrio salmonicida LFI1238] Length = 938 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 5/118 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 I + GD A A QG V E+FN++ +V I ++ NNQ TS + T + + Sbjct: 353 IPITIHGDSAIAGQGVVAETFNMSQARAFHVGGTIRIVINNQVGFTTSNPKDMRSTQYCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+ D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 413 DIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|156372817|ref|XP_001629232.1| predicted protein [Nematostella vectensis] gi|156216227|gb|EDO37169.1| predicted protein [Nematostella vectensis] Length = 947 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 8/121 (6%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRAS 230 R + + ++ GD A + QG VYE+F+++AL + I+++ NNQ T SR+S Sbjct: 333 RGKEVMSILLHGDAAFSGQGVVYETFHLSALPHYTTHGTIHIVVNNQIGFTTDPRYSRSS 392 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A + V + P V+ D AV A + ++I+++ YR GH+ Sbjct: 393 AYCTDVAKVV--DAPIFHVNADDPEAVMYVCKVAAEWRAEFNKDVVIDLVCYRRNGHNEG 450 Query: 291 D 291 D Sbjct: 451 D 451 >gi|209529759|gb|ACI49774.1| At3g21500 [Arabidopsis thaliana] Length = 629 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 42/196 (21%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ G M NG G G G +S G G+A + + Sbjct: 131 ILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSV 190 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY----------------AMGTSVS 227 V GDGA GQ YE+ N A + N+I ++ +N+ A+ ++S Sbjct: 191 VSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALS 250 Query: 228 ---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 R ++ T F + G + P VDG +I + + ++ + GP++I Sbjct: 251 RLQSNCGMIRETSSTLFEELGFHYVGP---VDGHNIDDLVSILETLKS--TKTIGPVLIH 305 Query: 279 MLTYRYRGHSMSDPAN 294 ++T + RG+ ++ A+ Sbjct: 306 VVTEKGRGYPYAERAD 321 >gi|51969370|dbj|BAD43377.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Arabidopsis thaliana] Length = 629 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 42/196 (21%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ G M NG G G G +S G G+A + + Sbjct: 131 ILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSV 190 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY----------------AMGTSVS 227 V GDGA GQ YE+ N A + N+I ++ +N+ A+ ++S Sbjct: 191 VSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALS 250 Query: 228 ---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 R ++ T F + G + P VDG +I + + ++ + GP++I Sbjct: 251 RLQSNCGMIRETSSTLFEELGFHYVGP---VDGHNIDDLVSILETLKS--TKTIGPVLIH 305 Query: 279 MLTYRYRGHSMSDPAN 294 ++T + RG+ ++ A+ Sbjct: 306 VVTEKGRGYPYAERAD 321 >gi|294618113|ref|ZP_06697709.1| 1-deoxy-d-xylulose-5-phosphate synthase [Enterococcus faecium E1679] gi|291595632|gb|EFF26929.1| 1-deoxy-d-xylulose-5-phosphate synthase [Enterococcus faecium E1679] Length = 587 Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 7/99 (7%) Query: 129 LTGRQGGISKG-----KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 LTGR+ G KG G S S + F GH +SL TG+A A ++ Sbjct: 85 LTGRKNGFEKGHYREVSGYSNQHESKHDYFTVGH--TSTSISLATGLAKARDLKKESGNV 142 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V GDG+ + G +E N + N+I ++ +N+ ++ Sbjct: 143 VAFIGDGSLSGGLAFEGLNNGGVLQSNLIVLVNDNEMSI 181 >gi|34785384|gb|AAH57354.1| Ogdh protein [Mus musculus] Length = 1034 Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 9/156 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 415 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 474 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV A + ++++++ YR GH+ D + Sbjct: 475 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRNTFHKDVVVDLVCYRRNGHNEMDEPMFTQ 534 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 ++R P+ Q LL S+G + E E Sbjct: 535 PLMYKQIRKQ-KPVLQKYAELL----VSQGVVNEPE 565 >gi|322784969|gb|EFZ11740.1| hypothetical protein SINV_11249 [Solenopsis invicta] Length = 1065 Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust. Identities = 32/162 (19%), Positives = 70/162 (43%), Gaps = 4/162 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG V+E+ +++ L + I+++ NNQ T + + + Sbjct: 413 MSILLHGDAAFCGQGIVFETMHLSDLPDYTTHGTIHIVVNNQIGFTTDPRHSRSSPYCTD 472 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV A + ++I++++YR GH+ D + Sbjct: 473 VARVVNAPIFHVNSDDPEAVMHVCKVAAEWRATFHKDVVIDLVSYRRNGHNEIDEPMFTQ 532 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 ++R+ +++ L+ N + ++K+++ KI Sbjct: 533 PLMYRKIRNTLSALDKYANTLIENNVVTPEEVKDVKAKYEKI 574 >gi|296134251|ref|YP_003641498.1| Transketolase domain protein [Thermincola sp. JR] gi|296032829|gb|ADG83597.1| Transketolase domain protein [Thermincola potens JR] Length = 279 Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K R D GDG +GQ++E+ AA + L N++ +++ Sbjct: 118 GSLGQGLSTAVGMALAGKIDRKDFRVYALLGDGEIQEGQIWEAAMAAAHYKLDNLVGILD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 +N + + + + +F + +DG D + + + + +A Sbjct: 178 HNGLQIDGPTCEVMSPEPVADKWQAFGWHVVVIDGHDFKQIISALQEA 225 >gi|224476545|ref|YP_002634151.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus carnosus subsp. carnosus TM300] gi|222421152|emb|CAL27966.1| putatative 2-oxoglutarate dehydrogenase E1 component [Staphylococcus carnosus subsp. carnosus TM300] Length = 931 Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust. Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 5/120 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + ++ GD A QG +E+ N+ L + +++I NN+ T + T Sbjct: 345 SKSMPILIHGDAAYPGQGINFEAMNLGNLDGYSTGGSLHIITNNRIGFTTEARDGRSTTY 404 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 + ++IP M V+ ++ A +D A+ + + ++I+++ YR GH+ M +P+ Sbjct: 405 STDVAKGYDIPIMHVNADNVEATIEAIDIAMDFRKEFNKDVVIDLVGYRRYGHNEMDEPS 464 >gi|146416219|ref|XP_001484079.1| hypothetical protein PGUG_03460 [Meyerozyma guilliermondii ATCC 6260] Length = 997 Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust. Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 4/154 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESF---NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A + QG VYE+ N+ A I+VI NNQ T A + S Sbjct: 381 MPILMHGDAAFSAQGVVYETMGFENLPAYSTGGTIHVIVNNQIGFTTDPRFARSTLYPSD 440 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + N P V+ D+ A+ + A + ++I+++ YR GH+ +D ++ Sbjct: 441 IAKAINAPIFHVNADDVEAMVFVFNLAAEWRATFHSDVLIDVVGYRKYGHNETDQPSFTQ 500 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 ++ ++ ++L+ K ++ D+ E Sbjct: 501 PLMYRKIAEKKSVLDYYTEQLIKEKTFTKEDIDE 534 >gi|124504597|gb|AAI28550.1| OGDH protein [Homo sapiens] Length = 636 Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 5/114 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 308 ILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVA 367 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 368 RVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 421 >gi|190347141|gb|EDK39362.2| hypothetical protein PGUG_03460 [Meyerozyma guilliermondii ATCC 6260] Length = 997 Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust. Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 4/154 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESF---NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A + QG VYE+ N+ A I+VI NNQ T A + S Sbjct: 381 MPILMHGDAAFSAQGVVYETMGFENLPAYSTGGTIHVIVNNQIGFTTDPRFARSTLYPSD 440 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + N P V+ D+ A+ + A + ++I+++ YR GH+ +D ++ Sbjct: 441 IAKAINAPIFHVNADDVEAMVFVFNLAAEWRATFHSDVLIDVVGYRKYGHNETDQPSFTQ 500 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 ++ ++ ++L+ K ++ D+ E Sbjct: 501 PLMYRKIAEKKSVLDYYTEQLIKEKTFTKEDIDE 534 >gi|186510292|ref|NP_566686.2| 1-deoxy-D-xylulose-5-phosphate synthase [Arabidopsis thaliana] gi|332642996|gb|AEE76517.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana] Length = 640 Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 42/196 (21%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ G M NG G G G +S G G+A + + Sbjct: 143 ILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSV 202 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY----------------AMGTSVS 227 V GDGA GQ YE+ N A + N+I ++ +N+ A+ ++S Sbjct: 203 VSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALS 262 Query: 228 ---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 R ++ T F + G + P VDG +I + + ++ + GP++I Sbjct: 263 RLQSNCGMIRETSSTLFEELGFHYVGP---VDGHNIDDLVSILETLKS--TKTIGPVLIH 317 Query: 279 MLTYRYRGHSMSDPAN 294 ++T + RG+ ++ A+ Sbjct: 318 VVTEKGRGYPYAERAD 333 >gi|291537736|emb|CBL10848.1| Transketolase, N-terminal subunit [Roseburia intestinalis M50/1] Length = 278 Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 12/144 (8%) Query: 158 GIVGAQVSLGTGIAFAN------KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 GI + SLG G++ A K+ + D GDG +GQ++E+ A L N Sbjct: 109 GIDMSSGSLGQGLSAAAGMAAAGKFDKKDYRVYALCGDGEIQEGQIWEAAMWAGFRKLDN 168 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 ++ +++NN + +V + K+ +FN + ++G D ++A +A R Sbjct: 169 LVVIVDNNNLQIDGTVDEVCSPYPIDKKFEAFNFHTININGNDFDEIRAAFKEA----RE 224 Query: 271 HKG-PIIIEMLTYRYRGHSMSDPA 293 KG P I T + +G S + A Sbjct: 225 TKGMPTAIIAKTLKGKGVSFMENA 248 >gi|262404437|ref|ZP_06080992.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio sp. RC586] gi|262349469|gb|EEY98607.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio sp. RC586] Length = 936 Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+FN++ V + ++ NNQ TS R + T + + Sbjct: 353 LPITVHGDSAIAGQGVVAETFNMSQARGFYVGGTVRIVVNNQVGFTTSNPRDTRSTMYCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+ D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 413 DIAKMVQAPIFHVNSDDPEAVAFVTRLALDYRNEFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|229892296|ref|NP_001153501.1| oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Nasonia vitripennis] Length = 1021 Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust. Identities = 35/173 (20%), Positives = 73/173 (42%), Gaps = 4/173 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG V+E+ +++ L + I+++ NNQ T + + + Sbjct: 411 MSILLHGDAAFCGQGVVFETMHLSDLPDYTTHGTIHIVVNNQIGFTTDPRHSRSSPYCTD 470 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV A + ++I++++YR GH+ D + Sbjct: 471 VARVVNAPIFHVNSDDPEAVMHVCKIAAEWRSTFHKDVVIDIVSYRRNGHNEIDEPMFTQ 530 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 +++ IE K+L+ +E ++K++ KI + A+ + Sbjct: 531 PLMYRKIKKTPPAIELYAKKLVSEGVVTEEEVKQVHEKYDKICEEAYSNAKQE 583 >gi|300741806|ref|ZP_07071827.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Rothia dentocariosa M567] gi|300380991|gb|EFJ77553.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Rothia dentocariosa M567] Length = 1276 Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 10/137 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ +A L ++++ NNQ TS TN + Sbjct: 693 LPILIHGDAAFAAQGIVMETLQMANLRGYTTGGTVHIVVNNQIGFTTSPKDGRTATNATD 752 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+ D AV A Y +I++L YR RGH SM+ Sbjct: 753 IARMTKAPVFHVNADDPEAVVRAGRLAFEYRERFGRDAVIDLLCYRRRGHNEADDPSMTQ 812 Query: 292 PANYRTREEINEMRSNH 308 P Y+ + + R+ + Sbjct: 813 PKMYQVIDNMPSTRTKY 829 >gi|289450408|ref|YP_003474371.1| transketolase, thiamine diphosphate binding domain-containing protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184955|gb|ADC91380.1| transketolase, thiamine diphosphate binding domain protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 285 Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 17/153 (11%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV-IE 216 G +G VS G+A +K D + GDG ++GQV+E A L+ + V ++ Sbjct: 118 GSLGQGVSTAIGMALGHKLAGDDVRTYLIVGDGECDEGQVWEGMLFAHQQKLDHLTVFVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N+ + +V + + +F +DG ++ A+ +A+A CR K P Sbjct: 178 YNKKQLDGTVEEVMDLGDIEAKFKAFGFHTENIDGNNVAAIL----EALAKCREVKDVPS 233 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNH 308 I + T + +G + E+ EM+ NH Sbjct: 234 CIILNTLKGKGIT-----------EVEEMKLNH 255 >gi|261210016|ref|ZP_05924315.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio sp. RC341] gi|260840962|gb|EEX67499.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio sp. RC341] Length = 936 Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS R + T Sbjct: 350 SKVLPITVHGDSAIAGQGVVAETFNMSQARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNSDDPEAVAFVTRLALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|229513742|ref|ZP_04403204.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae TMA 21] gi|229348923|gb|EEO13880.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae TMA 21] Length = 936 Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS R + T Sbjct: 350 SKVLPITIHGDSAIAGQGVVAETFNMSQARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNSDDPEAVAFVTRLALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|197103626|ref|YP_002129003.1| SucA, 2-oxoglutarate dehydrogenase, E1 component [Phenylobacterium zucineum HLK1] gi|196477046|gb|ACG76574.1| SucA, 2-oxoglutarate dehydrogenase, E1 component [Phenylobacterium zucineum HLK1] Length = 982 Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 4/118 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG V E F ++ L V ++ + NNQ TS + + Sbjct: 383 RSHVLPLLLHGDAAFAGQGVVAECFALSGLKGYGVGGTMHFVVNNQIGFTTSPKNSRSSP 442 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 S + P V+G D AV A Y + ++++M YR GH+ D Sbjct: 443 YPSDVALMVEAPIFHVNGDDPEAVVFAAKVATEYRQLFGKDVVVDMFCYRRFGHNEGD 500 >gi|169628484|ref|YP_001702133.1| alpha-ketoglutarate decarboxylase [Mycobacterium abscessus ATCC 19977] gi|169240451|emb|CAM61479.1| Probable 2-oxoglutarate dehydrogenase SucA [Mycobacterium abscessus] Length = 1238 Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N+A L I+++ NNQ T+ + + + Sbjct: 646 VPLMLHGDAAFAGQGVVAETLNLANLPGYRTGGTIHIVVNNQIGFTTAPEHSRSTEYCTD 705 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A AV + + ++I+++ YR RGH SM++ Sbjct: 706 IAKMIGAPIFHVNGDDPEACVWVSRLAVDFRQKFNKDVVIDLVCYRRRGHNEGDDPSMTN 765 Query: 292 PANY 295 P Y Sbjct: 766 PQMY 769 >gi|45550715|ref|NP_649812.2| CG8036, isoform B [Drosophila melanogaster] gi|45551847|ref|NP_731263.2| CG8036, isoform C [Drosophila melanogaster] gi|45446419|gb|AAF54265.3| CG8036, isoform B [Drosophila melanogaster] gi|45446420|gb|AAN13393.2| CG8036, isoform C [Drosophila melanogaster] gi|54650746|gb|AAV36952.1| LP07963p [Drosophila melanogaster] gi|220960280|gb|ACL92676.1| CG8036-PB [synthetic construct] Length = 626 Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 2/101 (1%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++G G+A+ K + ++D V GDG + +G ++ES + A + L N+ Sbjct: 120 GTGSLGQGVAVGAGMAYVGKNFDKADYRTYVVVGDGESAEGSIWESLHFAGHYKLDNLCV 179 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + + N+ + S + R +F + VDG D+ Sbjct: 180 IFDVNRLGQSEATSLQHKLDVYRDRLEAFGFNAVVVDGHDV 220 >gi|282861071|ref|ZP_06270136.1| 2-oxoglutarate dehydrogenase, E1 subunit [Streptomyces sp. ACTE] gi|282563729|gb|EFB69266.1| 2-oxoglutarate dehydrogenase, E1 subunit [Streptomyces sp. ACTE] Length = 1280 Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + + S++++ Sbjct: 695 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAAPESSRSSMYA 752 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P + V+G D AV A Y + ++I+++ YR RGH+ D Sbjct: 753 TDVARMIEAPIIHVNGDDPEAVVRVARLAFEYRQTFNKDVVIDLICYRRRGHNEGD 808 >gi|297545230|ref|YP_003677532.1| transketolase domain-containing protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843005|gb|ADH61521.1| Transketolase domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 273 Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + V GDG +GQ++E+ AA + L N+ +++ Sbjct: 115 GSLGQGLSAANGMALAGKLDKKGYRVYVILGDGELQEGQIWEAAMTAAHYKLDNLTAILD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + + + +F +++DG D + DKA+ +A KG P Sbjct: 175 FNGLQIDGPNREVKNIEPVADKFKAFGWHVIEIDGHDFDQI----DKAIEEAKATKGKPT 230 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 231 LIIAHTIKGKGVSF 244 >gi|257783982|ref|YP_003179199.1| Transketolase domain-containing protein [Atopobium parvulum DSM 20469] gi|257472489|gb|ACV50608.1| Transketolase domain protein [Atopobium parvulum DSM 20469] Length = 273 Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 7/135 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G VS G+A A K D GDG +GQV+E+ A L N+ +++ Sbjct: 114 GSLGQGVSTAVGMALAGKKFNKDYRVYALLGDGEIEEGQVWEAAMFAGNHQLDNLTLIVD 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + ++ + + ++ +F ++V DG D + A A A R KG P Sbjct: 174 NNNLQLDGTLEQINTPQPIGEKFKAFKFHVIEVADGHDFDQLAA----AFAEARTIKGQP 229 Query: 275 IIIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 230 TVIIAHTVKGKGVSF 244 >gi|195499166|ref|XP_002096833.1| GE25892 [Drosophila yakuba] gi|194182934|gb|EDW96545.1| GE25892 [Drosophila yakuba] Length = 626 Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 2/101 (1%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++G G+A+ K + ++D V GDG + +G ++ES + A + L N+ Sbjct: 120 GTGSLGQGVAVGAGMAYVGKNFDKADYRTYVVVGDGESAEGSIWESLHFAGHYKLDNLCV 179 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + + N+ + S + R +F + VDG D+ Sbjct: 180 IFDVNRLGQSEATSLQHKLDVYRDRLEAFGFNAVVVDGHDV 220 >gi|167045817|gb|ABZ10485.1| transketolase-like 1 (predicted) [Callithrix jacchus] Length = 569 Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust. Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 5/139 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 67 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 126 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + NQ +++ + +R +F VDG D+ A+ +A HK P Sbjct: 127 DMNQLGCSSALPSKHCIDIYRRRCEAFGWNTYVVDGRDVEALCRVFWQASQV--KHK-PT 183 Query: 276 IIEMLTYRYRGHSMSDPAN 294 + T+R RG ++ A Sbjct: 184 AVVAKTFRGRGTPNTEDAK 202 >gi|323487396|ref|ZP_08092694.1| hypothetical protein HMPREF9474_04445 [Clostridium symbiosum WAL-14163] gi|323399302|gb|EGA91702.1| hypothetical protein HMPREF9474_04445 [Clostridium symbiosum WAL-14163] Length = 285 Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 8/157 (5%) Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL- 209 NG G +G +S G+A + K GDG +GQV+E+ A L Sbjct: 108 NGVDMSSGSLGQGISAAAGMAVSAKISGDSYHVYTLLGDGEIQEGQVWEAAMFAGHRKLD 167 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYC 268 N+ +++NN + S+ + K+ +FN + V DG D+ +K D+A Sbjct: 168 NLTVIVDNNNLQIDGSIEDVCSPYPIDKKFEAFNFHVICVEDGNDMEQLKKAFDEA---- 223 Query: 269 RAHKG-PIIIEMLTYRYRGHS-MSDPANYRTREEINE 303 + KG P+ I T + +G S M + A++ + +E Sbjct: 224 KTVKGKPVAIIARTLKGKGVSFMENKASWHGKAPNDE 260 >gi|311111697|ref|YP_003982919.1| 2-oxoglutarate dehydrogenase E1 component [Rothia dentocariosa ATCC 17931] gi|310943191|gb|ADP39485.1| 2-oxoglutarate dehydrogenase E1 component [Rothia dentocariosa ATCC 17931] Length = 1276 Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 10/137 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ +A L ++++ NNQ TS TN + Sbjct: 693 LPILIHGDAAFAAQGIVMETLQMANLRGYTTGGTVHIVVNNQIGFTTSPKDGRTATNATD 752 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+ D AV A Y +I++L YR RGH SM+ Sbjct: 753 IARMTKAPVFHVNADDPEAVVRAGRLAFEYRERFGRDAVIDLLCYRRRGHNEADDPSMTQ 812 Query: 292 PANYRTREEINEMRSNH 308 P Y+ + + R+ + Sbjct: 813 PKMYQVIDNMPSTRTKY 829 >gi|229528897|ref|ZP_04418287.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae 12129(1)] gi|229332671|gb|EEN98157.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae 12129(1)] gi|327484619|gb|AEA79026.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae LMA3894-4] Length = 936 Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS R + T Sbjct: 350 SKVLPITIHGDSAIAGQGVVAETFNMSQARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNSDDPEAVAFVTRLALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|195572499|ref|XP_002104233.1| GD18560 [Drosophila simulans] gi|194200160|gb|EDX13736.1| GD18560 [Drosophila simulans] Length = 626 Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 2/101 (1%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++G G+A+ K + ++D V GDG + +G ++ES + A + L N+ Sbjct: 120 GTGSLGQGVAVGAGMAYVGKNFDKADYRTYVVVGDGESAEGSIWESLHFAGHYKLDNLCV 179 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + + N+ + S + R +F + VDG D+ Sbjct: 180 IFDVNRLGQSEATSLQHKLDVYRDRLEAFGFNAVVVDGHDV 220 >gi|153801970|ref|ZP_01956556.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae MZO-3] gi|124122484|gb|EAY41227.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae MZO-3] Length = 936 Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS R + T Sbjct: 350 SKVLPITIHGDSAIAGQGVVAETFNMSQARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNSDDPEAVAFVTRLALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|304570644|ref|YP_832124.2| alpha-ketoglutarate decarboxylase [Arthrobacter sp. FB24] Length = 1297 Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 18/159 (11%) Query: 158 GIVGA-QVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---I 212 GIV A Q L G AF + ++ GD A A QG V E+ N++ L I Sbjct: 689 GIVRAKQDRLDQGEAFP-------VLPIMVHGDAAFAGQGVVAETLNLSQLRGYRTGGTI 741 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +V+ NNQ T+ S + + T + P V+G D AV A + + Sbjct: 742 HVVVNNQVGFTTAPSSSRSSTYSTDVAKMIQAPVFHVNGDDPEAVVRIGQLAYEFRQRFH 801 Query: 273 GPIIIEMLTYRYRGH------SMSDPANYRTREEINEMR 305 ++I+M+ YR RGH SM+ P Y E +R Sbjct: 802 KDVVIDMVCYRRRGHNEGDDPSMTQPLMYNLIEAKRSVR 840 >gi|293552783|ref|ZP_06673444.1| 1-deoxy-d-xylulose-5-phosphate synthase 2 [Enterococcus faecium E1039] gi|291603092|gb|EFF33283.1| 1-deoxy-d-xylulose-5-phosphate synthase 2 [Enterococcus faecium E1039] Length = 587 Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 7/99 (7%) Query: 129 LTGRQGGISKG-----KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 LTGR+ G KG G S S + F GH +SL TG+A A ++ Sbjct: 85 LTGRKNGFEKGHYREVSGYSNQHESKHDYFTVGH--TSTSISLATGLAKARDLKKESGNV 142 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V GDG+ + G +E N + N+I ++ +N+ ++ Sbjct: 143 VAFIGDGSLSGGLAFEGLNNGGVLQSNLIVLVNDNEMSI 181 >gi|323527759|ref|YP_004229912.1| transketolase domain-containing protein [Burkholderia sp. CCGE1001] gi|323384761|gb|ADX56852.1| Transketolase domain-containing protein [Burkholderia sp. CCGE1001] Length = 273 Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 5/144 (3%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G +G +G +S+ GIA A K ++ V GDG N+G V+E+ AA L N Sbjct: 110 GIESSNGSLGQGLSMAIGIALAAKKKQQAFNTYVLLGDGECNEGSVWEAIMSAAQLRLDN 169 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 ++ +I+ N+ ++ + + + SF +VDG DI A + A A + Sbjct: 170 LVAMIDYNKLQSDGEANQIVDLGDLADKFRSFRWDVHEVDGHDI----AQLVAAFATPKV 225 Query: 271 HKGPIIIEMLTYRYRGHSMSDPAN 294 P ++ T + +G S + N Sbjct: 226 AGRPRVLVAHTVKGKGISFMENNN 249 >gi|237799969|ref|ZP_04588430.1| transketolase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022824|gb|EGI02881.1| transketolase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 256 Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 55/124 (44%), Gaps = 11/124 (8%) Query: 156 GHGIVGAQVSLGTGIA----FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G I G + G GIA K + S DG N+G +E+ A+ W L N Sbjct: 90 GMEITGGSLGHGLGIAVGACLGLKRKNSRSFVYNLLSDGELNEGSTWEAAMSASHWKLDN 149 Query: 211 VIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 +I +I+ NNQ A G + S A R +F +VDG D+ A+ A D A R Sbjct: 150 LIAIIDVNNQQADGHA-SEVLAFEPIVDRWQAFGWFTQRVDGNDLNALVAAFDAA----R 204 Query: 270 AHKG 273 H+G Sbjct: 205 QHQG 208 >gi|242013345|ref|XP_002427370.1| 2-oxoglutarate dehydrogenase, putative [Pediculus humanus corporis] gi|212511739|gb|EEB14632.1| 2-oxoglutarate dehydrogenase, putative [Pediculus humanus corporis] Length = 877 Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 81/214 (37%), Gaps = 33/214 (15%) Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQG------GISKGKGGSMHMFSTKNG 152 L E + ++ A + L C +D + + +S+GK + M + K G Sbjct: 216 LPEFNSLVKATGDVLSHLTCSIDIGSVHITMLPNPSHLEAVNPVSQGKTRAKQMMA-KEG 274 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV 211 YG SLG I I V GD A A QG E+ IA L + N Sbjct: 275 DYGK-----GDNSLGEKI-----------INVQVHGDAAFAGQGVNQETLLIAGLPHYNT 318 Query: 212 ---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 I++I NNQ T R S + P V+G V + A+ Y Sbjct: 319 GGTIHLIVNNQMGFTTPSDRGRPTIYASDLAKMISAPVFHVNGDFPEEVARVTELAMEYQ 378 Query: 269 RAHKGPIIIEMLTYRYRGH------SMSDPANYR 296 R + + I+M YR GH + ++PA Y+ Sbjct: 379 RKFRKDVFIDMNCYRQWGHNELDDPTFTNPAVYK 412 >gi|254446977|ref|ZP_05060444.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium HTCC5015] gi|198263116|gb|EDY87394.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium HTCC5015] Length = 633 Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 4/102 (3%) Query: 129 LTGR--QGGISKGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR Q G + K G K Y G+ +S G+A A + D+ V Sbjct: 89 LTGRRDQLGTIRKKDGLTPFPKRKESEYDTFGVGHSSTSISAALGMAMAARLNGEDRKAV 148 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GDGA G +E+ N A N N++ ++ +N+ ++ +V Sbjct: 149 AIIGDGAMTAGMAFEALNNAGDLNANMLVILNDNEMSISPNV 190 >gi|70954318|ref|XP_746211.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56526750|emb|CAH88747.1| hypothetical protein PC000632.04.0 [Plasmodium chabaudi chabaudi] Length = 558 Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 15/178 (8%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT------GIAFANKYRRSDK- 181 + G G + G + + ++ Y GIV L + G A A +Y +DK Sbjct: 342 IWGNTGDVKYHLGVEIDHYDEESNRYIHLGIVDNSSHLESVNPILMGQARAQQYYCNDKE 401 Query: 182 ----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 + ++ GD + A QG YE+F ++ L + +V I+++ NNQ T A + Sbjct: 402 KKKVLPIIIHGDASIAGQGIAYETFQMSKLPSYSVGGTIHIVVNNQIGFTTYPVDARSGK 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + G +IP + V+ D AV A+ II+++ YR GH+ D Sbjct: 462 YCTDIGKCIDIPIIHVNADDPEAVTYVFGLALDIRNKFNIDTIIDLVGYRKYGHNELD 519 >gi|153213701|ref|ZP_01948953.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae 1587] gi|153828922|ref|ZP_01981589.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae 623-39] gi|254286796|ref|ZP_04961749.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae AM-19226] gi|124115762|gb|EAY34582.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae 1587] gi|148875628|gb|EDL73763.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae 623-39] gi|150423087|gb|EDN15035.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae AM-19226] Length = 936 Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS R + T Sbjct: 350 SKVLPITIHGDSAIAGQGVVAETFNMSQARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNSDDPEAVAFVTRLALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|15642087|ref|NP_231719.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121727388|ref|ZP_01680527.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae V52] gi|147675042|ref|YP_001217612.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae O395] gi|153818388|ref|ZP_01971055.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae NCTC 8457] gi|153821686|ref|ZP_01974353.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae B33] gi|153826099|ref|ZP_01978766.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae MZO-2] gi|227082213|ref|YP_002810764.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae M66-2] gi|229507824|ref|ZP_04397329.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae BX 330286] gi|229511939|ref|ZP_04401418.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae B33] gi|229519075|ref|ZP_04408518.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae RC9] gi|229522044|ref|ZP_04411461.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae TM 11079-80] gi|229524093|ref|ZP_04413498.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae bv. albensis VL426] gi|229607369|ref|YP_002878017.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae MJ-1236] gi|254849173|ref|ZP_05238523.1| alpha-ketoglutarate decarboxylase [Vibrio cholerae MO10] gi|255745170|ref|ZP_05419119.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholera CIRS 101] gi|262155972|ref|ZP_06029093.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae INDRE 91/1] gi|262167706|ref|ZP_06035409.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae RC27] gi|297579591|ref|ZP_06941519.1| alpha-ketoglutarate decarboxylase [Vibrio cholerae RC385] gi|298497887|ref|ZP_07007694.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Vibrio cholerae MAK 757] gi|9656635|gb|AAF95233.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121630280|gb|EAX62678.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae V52] gi|126511078|gb|EAZ73672.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae NCTC 8457] gi|126520784|gb|EAZ78007.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae B33] gi|146316925|gb|ABQ21464.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae O395] gi|149740216|gb|EDM54369.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae MZO-2] gi|227010101|gb|ACP06313.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae M66-2] gi|227013984|gb|ACP10194.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae O395] gi|229337674|gb|EEO02691.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae bv. albensis VL426] gi|229340969|gb|EEO05974.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae TM 11079-80] gi|229343764|gb|EEO08739.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae RC9] gi|229351904|gb|EEO16845.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae B33] gi|229355329|gb|EEO20250.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae BX 330286] gi|229370024|gb|ACQ60447.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae MJ-1236] gi|254844878|gb|EET23292.1| alpha-ketoglutarate decarboxylase [Vibrio cholerae MO10] gi|255737000|gb|EET92396.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholera CIRS 101] gi|262023911|gb|EEY42609.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae RC27] gi|262030283|gb|EEY48926.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio cholerae INDRE 91/1] gi|297537185|gb|EFH76018.1| alpha-ketoglutarate decarboxylase [Vibrio cholerae RC385] gi|297542220|gb|EFH78270.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Vibrio cholerae MAK 757] Length = 936 Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS R + T Sbjct: 350 SKVLPITIHGDSAIAGQGVVAETFNMSQARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNSDDPEAVAFVTRLALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|303228681|ref|ZP_07315506.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Veillonella atypica ACS-134-V-Col7a] gi|302516661|gb|EFL58578.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Veillonella atypica ACS-134-V-Col7a] Length = 584 Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 16/182 (8%) Query: 129 LTGRQGGI-SKGKGGSMHMFS-----TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR G +K K ++ +S T + F+ GH +SL G+ + Sbjct: 80 LTGRYEGFKNKDKFHTVSGYSNPDESTYDAFHLGHA--STSLSLACGLMIGRDLQHKTYP 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT------SVSRASAQTNFS 236 + GDGA + G+ YE+ N A + + +I +N ++ S + +TN Sbjct: 138 IITLIGDGALSGGEAYEALNHLATMSSQCLIIINDNDQSIAENHGGLYSHLQQLRETNGE 197 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH--SMSDPAN 294 F G +D T+ KA+ C+A PI++ + T + G+ ++++P + Sbjct: 198 SPNNIFKALGFSYRYVDDGNSLPTVIKALKECKAETTPIVLHIHTTKGYGYNKAITNPES 257 Query: 295 YR 296 + Sbjct: 258 FH 259 >gi|331686260|gb|AED87010.1| 2-oxoglutarate dehydrogenase [Stylonychia lemnae] Length = 1025 Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG VYES + L N V +V+ N Q T+ ++ + + Sbjct: 422 VPVIIHGDAAFAGQGVVYESMQMQNLINFKVGGSYHVVVNXQIGFTTTPHKSRSGVYCTD 481 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + + P V+ + V A Y +K ++I+++ YR GH+ D + Sbjct: 482 IAKAIDAPIFHVNADSMEDVAKVFSIAAEYRHRYKEDVVIDLIGYRKMGHNELDAPQF 539 >gi|60360580|dbj|BAD90530.1| mKIAA4192 protein [Mus musculus] Length = 1066 Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 447 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 506 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 507 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRNTFHKDVVVDLVCYRRNGHNEMDEP 562 >gi|24645119|ref|NP_731264.1| CG8036, isoform D [Drosophila melanogaster] gi|23170725|gb|AAN13394.1| CG8036, isoform D [Drosophila melanogaster] Length = 580 Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 2/101 (1%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++G G+A+ K + ++D V GDG + +G ++ES + A + L N+ Sbjct: 74 GTGSLGQGVAVGAGMAYVGKNFDKADYRTYVVVGDGESAEGSIWESLHFAGHYKLDNLCV 133 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + + N+ + S + R +F + VDG D+ Sbjct: 134 IFDVNRLGQSEATSLQHKLDVYRDRLEAFGFNAVVVDGHDV 174 >gi|167036915|ref|YP_001664493.1| transketolase domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039620|ref|YP_001662605.1| transketolase domain-containing protein [Thermoanaerobacter sp. X514] gi|307725054|ref|YP_003904805.1| transketolase domain-containing protein [Thermoanaerobacter sp. X513] gi|320115334|ref|YP_004185493.1| transketolase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166853860|gb|ABY92269.1| Transketolase domain protein [Thermoanaerobacter sp. X514] gi|166855749|gb|ABY94157.1| Transketolase domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|307582115|gb|ADN55514.1| Transketolase domain-containing protein [Thermoanaerobacter sp. X513] gi|319928425|gb|ADV79110.1| Transketolase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 273 Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + V GDG +GQ++E+ AA + L N+ +++ Sbjct: 115 GSLGQGLSAANGMALAGKLDKKGYRVYVILGDGELQEGQIWEAAMTAAHYKLDNLTAILD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + +++ +F +++DG D + DKA+ +A KG P Sbjct: 175 FNGLQIDGPNREVKNIEPVNEKFNAFGWHVIEIDGHDFDQI----DKAIEEAKATKGKPT 230 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 231 LIIAHTIKGKGVSF 244 >gi|145219573|ref|YP_001130282.1| transketolase subunit A [Prosthecochloris vibrioformis DSM 265] gi|145205737|gb|ABP36780.1| transketolase subunit A [Chlorobium phaeovibrioides DSM 265] Length = 303 Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 7/152 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G A K D GDG +GQ++E+ AA + L N+I +++ Sbjct: 136 GSLGQGLSVAVGAAKGMKMDECDGRVFCLMGDGECQEGQIWEAAMSAAHFGLGNLIGIVD 195 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + VS F+ + SF DG DI AT+ K A + + P + Sbjct: 196 FNNQQIDGEVSGVMGIEPFADKWKSFGWDVYHCDGNDIEDFIATIGKIKAAGSSDR-PSV 254 Query: 277 IEMLTYRYRG-----HSMSDPANYRTREEINE 303 + +T +G +M D N+ + E Sbjct: 255 VLAVTVMGKGVPFFEGTMPDNTNWHGKPPSKE 286 >gi|116611300|gb|ABK04024.1| 2-oxoglutarate dehydrogenase E1 component [Arthrobacter sp. FB24] Length = 1277 Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 18/159 (11%) Query: 158 GIVGA-QVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---I 212 GIV A Q L G AF + ++ GD A A QG V E+ N++ L I Sbjct: 669 GIVRAKQDRLDQGEAFP-------VLPIMVHGDAAFAGQGVVAETLNLSQLRGYRTGGTI 721 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +V+ NNQ T+ S + + T + P V+G D AV A + + Sbjct: 722 HVVVNNQVGFTTAPSSSRSSTYSTDVAKMIQAPVFHVNGDDPEAVVRIGQLAYEFRQRFH 781 Query: 273 GPIIIEMLTYRYRGH------SMSDPANYRTREEINEMR 305 ++I+M+ YR RGH SM+ P Y E +R Sbjct: 782 KDVVIDMVCYRRRGHNEGDDPSMTQPLMYNLIEAKRSVR 820 >gi|326563358|gb|EGE13623.1| 2-oxoglutarate dehydrogenase E1 component [Moraxella catarrhalis 12P80B1] gi|326569266|gb|EGE19327.1| 2-oxoglutarate dehydrogenase E1 component [Moraxella catarrhalis BC7] gi|326571942|gb|EGE21947.1| 2-oxoglutarate dehydrogenase E1 component [Moraxella catarrhalis BC8] gi|326577929|gb|EGE27793.1| 2-oxoglutarate dehydrogenase E1 component [Moraxella catarrhalis O35E] Length = 951 Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 20/166 (12%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK----------ICVVCFGDG 190 GG MH+ F H + + V G+ A + RRS+K + +V GD Sbjct: 311 GGEMHL---ALAFNPSHLEIVSPVLQGS--VRARQARRSEKYGLQIDNSTVLPLVVHGDA 365 Query: 191 A-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIP 245 A A QG E+F ++ A ++++ NNQ TS + T + + + P Sbjct: 366 ALAGQGVNQETFQMSQTRAYKTGGTVHIVINNQVGFTTSRIEDARSTEYCTDVAKMVHAP 425 Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + V+G D AV AV Y R +++++ YR GH+ SD Sbjct: 426 ILHVNGDDPEAVVFASQLAVDYRREFGKDVMLDIFCYRRNGHNESD 471 >gi|116250747|ref|YP_766585.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum bv. viciae 3841] gi|118595610|sp|Q1MKN4|DXS_RHIL3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|115255395|emb|CAK06470.1| putative 1-deoxy-d-xylulose-5-phosphate synthase [Rhizobium leguminosarum bv. viciae 3841] Length = 638 Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 34/68 (50%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A +SD+ + GDGA + G YE+ N A + +I ++ +N ++ Sbjct: 126 ISAGLGMAIAADLDKSDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIA 185 Query: 224 TSVSRASA 231 SA Sbjct: 186 PPTGAMSA 193 >gi|296133202|ref|YP_003640449.1| deoxyxylulose-5-phosphate synthase [Thermincola sp. JR] gi|296031780|gb|ADG82548.1| deoxyxylulose-5-phosphate synthase [Thermincola potens JR] Length = 638 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 64/218 (29%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 L+GRQ GG+S G S + F GH +S G+A A ++ Sbjct: 83 LSGRQQEFDTLRQYGGLS---GFPKRSESEYDSFNTGHS--STSISAVLGMALARDLKKE 137 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 + + GDGA G +E+ N A N+I V+ +N+ ++ +V S + + Sbjct: 138 NFHVIAVIGDGALTGGMAFEALNHAGHLGTNIIVVLNDNEMSISENVGALSGYLSRMRTD 197 Query: 240 VSFN-----------------------------------IPGM-----------QVDGMD 253 +N +PGM +DG + Sbjct: 198 PMYNRHKEEMENLLKKIPSIGPTVFKAIERIKDSFKYLVVPGMIFEELGFTYLGPIDGHN 257 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 I VK +++A + KGPI++ ++T + +G+ ++ Sbjct: 258 IMEVKTVLERA----KRTKGPIMVHVVTRKGKGYEPAE 291 >gi|144900827|emb|CAM77691.1| Deoxyxylulose-5-phosphate synthase [Magnetospirillum gryphiswaldense MSR-1] Length = 637 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +GG + F+ + + F GH +S G G+A + D Sbjct: 85 LTGRKDRIRTLRQGGGLSGFTKRSESAYDPFGAGHS--STSISAGLGMAVGRDLKGEDFN 142 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDGA + G VYE+ N A + ++ ++ +N ++ V SA Sbjct: 143 VIAVIGDGAMSAGMVYEAMNNAGSMDSRLVVILNDNDMSIAPPVGAMSA 191 >gi|124002420|ref|ZP_01687273.1| transketolase subunit A [Microscilla marina ATCC 23134] gi|123992249|gb|EAY31617.1| transketolase subunit A [Microscilla marina ATCC 23134] Length = 282 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 5/138 (3%) Query: 148 STKNGFYG---GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 +T+ G G G +G +S+ TG A A K D + V GDG +GQV+E+ A Sbjct: 107 ATEEGLPGIRVASGSLGQGLSVATGAAQAKKLNGDDHLVYVLMGDGEQQEGQVWEAAMYA 166 Query: 205 ALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 A + N+I VI+ N + V + + + +F + + G + V T+ Sbjct: 167 AHHKVDNLIGVIDVNGQQIDGPVEDVMSLISLENKWKAFGWQVLHMKGNQMDEVIKTLVH 226 Query: 264 AVAYCRAHKGPIIIEMLT 281 A + K P++I M T Sbjct: 227 ARGLTKRDK-PLMILMQT 243 >gi|328697388|ref|XP_003240324.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like isoform 3 [Acyrthosiphon pisum] Length = 1026 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 4/162 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG VYE+F+++ L + I+++ NNQ T + + + Sbjct: 416 MSLLLHGDAAFCGQGVVYETFHLSDLPDYTTHGTIHIVVNNQIGFTTDPRHSRSSPYCTD 475 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV + A + ++I++++YR GH+ D + Sbjct: 476 VARVVNAPIFHVNSDDPEAVMHVCNIAAEWRNVFHKDVVIDLVSYRRYGHNEIDEPMFTQ 535 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 ++ +++ +L+ K ++ ++K++ KI Sbjct: 536 PIMYKVIKKTPPVLDKYADKLIEEKVVTKEEVKDVWDKYDKI 577 >gi|296112300|ref|YP_003626238.1| 2-oxoglutarate dehydrogenase E1 component [Moraxella catarrhalis RH4] gi|295919994|gb|ADG60345.1| 2-oxoglutarate dehydrogenase E1 component [Moraxella catarrhalis RH4] Length = 951 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 20/166 (12%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK----------ICVVCFGDG 190 GG MH+ F H + + V G+ A + RRS+K + +V GD Sbjct: 311 GGEMHL---ALAFNPSHLEIVSPVLQGS--VRARQARRSEKYGLQIDNSTVLPLVVHGDA 365 Query: 191 A-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIP 245 A A QG E+F ++ A ++++ NNQ TS + T + + + P Sbjct: 366 ALAGQGVNQETFQMSQTRAYKTGGTVHIVINNQVGFTTSRIEDARSTEYCTDVAKMVHAP 425 Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + V+G D AV AV Y R +++++ YR GH+ SD Sbjct: 426 ILHVNGDDPEAVVFASQLAVDYRREFGKDVMLDIFCYRRNGHNESD 471 >gi|226323203|ref|ZP_03798721.1| hypothetical protein COPCOM_00975 [Coprococcus comes ATCC 27758] gi|225208393|gb|EEG90747.1| hypothetical protein COPCOM_00975 [Coprococcus comes ATCC 27758] Length = 629 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 79/211 (37%), Gaps = 58/211 (27%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G K G M F + + F GH +S G G A D Sbjct: 83 LTGRKEGFDGLRKYGGMSGFPKRKESDCDAFDTGHS--STSISAGLGYARGRDILGQDYS 140 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS----------RASAQ 232 + GDG+ G YE+ N AA N I V+ +N ++ +V A A Sbjct: 141 VISVIGDGSLTGGMAYEALNNAAEMKTNFIIVLNDNHMSISKNVGGMSSYLGELRTAQAY 200 Query: 233 TNFS---------------------KRGVS----FNIPGM-----------QVDGMDIRA 256 T+ KR S +PGM VDG D++A Sbjct: 201 TDLKDTVENVLGSIPFGGEKMVRHIKRTKSSIKQLLVPGMFFEDMGIKYLGPVDGHDLKA 260 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 ++ +A + KGP+++ +LT + +G+ Sbjct: 261 LR----RAFTEAKRVKGPVLVHVLTKKGKGY 287 >gi|194378950|dbj|BAG58026.1| unnamed protein product [Homo sapiens] Length = 856 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 237 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 296 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 297 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 352 >gi|121586906|ref|ZP_01676686.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae 2740-80] gi|121548842|gb|EAX58885.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae 2740-80] Length = 936 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS R + T Sbjct: 350 SKVLPITIHGDSAIAGQGVVAETFNMSQARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNSDDPEAVAFVTRLALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|328697385|ref|XP_003240323.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like isoform 2 [Acyrthosiphon pisum] Length = 1047 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 4/162 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG VYE+F+++ L + I+++ NNQ T + + + Sbjct: 437 MSLLLHGDAAFCGQGVVYETFHLSDLPDYTTHGTIHIVVNNQIGFTTDPRHSRSSPYCTD 496 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV + A + ++I++++YR GH+ D + Sbjct: 497 VARVVNAPIFHVNSDDPEAVMHVCNIAAEWRNVFHKDVVIDLVSYRRYGHNEIDEPMFTQ 556 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 ++ +++ +L+ K ++ ++K++ KI Sbjct: 557 PIMYKVIKKTPPVLDKYADKLIEEKVVTKEEVKDVWDKYDKI 598 >gi|297621226|ref|YP_003709363.1| 2-oxoglutarate dehydrogenase E1 component [Waddlia chondrophila WSU 86-1044] gi|297376527|gb|ADI38357.1| 2-oxoglutarate dehydrogenase E1 component [Waddlia chondrophila WSU 86-1044] Length = 904 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 4/147 (2%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 +R + ++ GD A A QG +YE+ + L I+++ NNQ T+ + Sbjct: 319 KREHSLPILIHGDAAIAGQGIIYETLQLYGLEGYATGGSIHLVINNQIGFTTTPENGRST 378 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + +F+ P V+ D A + A+ + + + I++ YR GH+ D Sbjct: 379 GYCTDIARAFDAPVFHVNAEDPEGCVAAIHLAIELRQKFQCDVFIDLNCYRKYGHNEGDE 438 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLL 319 + E + +RS E R L+ Sbjct: 439 PAFTQPHEYDLIRSKKSIREIYRDDLI 465 >gi|240146635|ref|ZP_04745236.1| transketolase [Roseburia intestinalis L1-82] gi|257201177|gb|EEU99461.1| transketolase [Roseburia intestinalis L1-82] Length = 278 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 12/144 (8%) Query: 158 GIVGAQVSLGTGIAFAN------KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 GI + SLG G++ A K+ + D GDG +GQ++E+ A L N Sbjct: 109 GIDMSSGSLGQGLSAAAGMAAAGKFDKKDYRVYALCGDGEIQEGQIWEAAMWAGFRKLDN 168 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 ++ +++NN + +V + K+ +FN + ++G D ++A +A R Sbjct: 169 LVVIVDNNNLQIDGTVDEVCSPYPIDKKFEAFNFHTIDINGNDFDEIRAAFKEA----RE 224 Query: 271 HKG-PIIIEMLTYRYRGHSMSDPA 293 KG P I T + +G S + A Sbjct: 225 TKGMPTAIIAKTVKGKGVSFMENA 248 >gi|193704554|ref|XP_001950262.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like isoform 1 [Acyrthosiphon pisum] Length = 1029 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 4/162 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG VYE+F+++ L + I+++ NNQ T + + + Sbjct: 419 MSLLLHGDAAFCGQGVVYETFHLSDLPDYTTHGTIHIVVNNQIGFTTDPRHSRSSPYCTD 478 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV + A + ++I++++YR GH+ D + Sbjct: 479 VARVVNAPIFHVNSDDPEAVMHVCNIAAEWRNVFHKDVVIDLVSYRRYGHNEIDEPMFTQ 538 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 ++ +++ +L+ K ++ ++K++ KI Sbjct: 539 PIMYKVIKKTPPVLDKYADKLIEEKVVTKEEVKDVWDKYDKI 580 >gi|241203354|ref|YP_002974450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857244|gb|ACS54911.1| deoxyxylulose-5-phosphate synthase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 638 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 34/68 (50%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A +SD+ + GDGA + G YE+ N A + +I ++ +N ++ Sbjct: 126 ISAGLGMAIAADLDKSDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIA 185 Query: 224 TSVSRASA 231 SA Sbjct: 186 PPTGAMSA 193 >gi|85861164|ref|NP_035086.2| 2-oxoglutarate dehydrogenase, mitochondrial precursor [Mus musculus] gi|146345472|sp|Q60597|ODO1_MOUSE RecName: Full=2-oxoglutarate dehydrogenase, mitochondrial; AltName: Full=2-oxoglutarate dehydrogenase complex component E1; Short=OGDC-E1; AltName: Full=Alpha-ketoglutarate dehydrogenase; Flags: Precursor gi|15489120|gb|AAH13670.1| Ogdh protein [Mus musculus] gi|56206142|emb|CAI24405.1| oxoglutarate dehydrogenase (lipoamide) [Mus musculus] gi|74141959|dbj|BAE41044.1| unnamed protein product [Mus musculus] gi|74181111|dbj|BAE27824.1| unnamed protein product [Mus musculus] gi|148708634|gb|EDL40581.1| oxoglutarate dehydrogenase (lipoamide), isoform CRA_a [Mus musculus] Length = 1023 Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRNTFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|326565896|gb|EGE16057.1| 2-oxoglutarate dehydrogenase E1 component [Moraxella catarrhalis 103P14B1] gi|326575454|gb|EGE25379.1| 2-oxoglutarate dehydrogenase E1 component [Moraxella catarrhalis 101P30B1] gi|326576458|gb|EGE26366.1| 2-oxoglutarate dehydrogenase E1 component [Moraxella catarrhalis CO72] Length = 951 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 20/166 (12%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK----------ICVVCFGDG 190 GG MH+ F H + + V G+ A + RRS+K + +V GD Sbjct: 311 GGEMHL---ALAFNPSHLEIVSPVLQGS--VRARQARRSEKYGLQIDNSTVLPLVVHGDA 365 Query: 191 A-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIP 245 A A QG E+F ++ A ++++ NNQ TS + T + + + P Sbjct: 366 ALAGQGVNQETFQMSQTRAYKTGGTVHIVINNQVGFTTSRIEDARSTEYCTDVAKMVHAP 425 Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + V+G D AV AV Y R +++++ YR GH+ SD Sbjct: 426 ILHVNGDDPEAVVFASQLAVDYRREFGKDVMLDIFCYRRNGHNESD 471 >gi|310829656|ref|YP_003962013.1| Transketolase domain protein [Eubacterium limosum KIST612] gi|308741390|gb|ADO39050.1| Transketolase domain protein [Eubacterium limosum KIST612] Length = 269 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 5/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A K ++D V GDG +G V+E+ AA + L N+I ++ Sbjct: 113 GSLGQGISAAVGMALGAKIDKADWKTYVLLGDGELQEGLVWEAAMSAAHYKLDNLIAFVD 172 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPI 275 NN + +++ + ++ +F + + DG D ++ ++KA A C P Sbjct: 173 NNNLQIDGAITDVMSPYPIDEKFAAFGWNVINIADGNDFEELREGLEKAYA-CEGK--PS 229 Query: 276 IIEMLTYRYRGHS 288 ++ T + +G S Sbjct: 230 VLVCKTVKGKGVS 242 >gi|209544263|ref|YP_002276492.1| 2-oxoglutarate dehydrogenase, E1 subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209531940|gb|ACI51877.1| 2-oxoglutarate dehydrogenase, E1 subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 955 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 4/126 (3%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 + + RS + ++ GD A A QG VYE+ ++ L I+V+ NNQ T + A Sbjct: 355 DPHARSRHMALLLHGDAAFAGQGLVYETMAMSQLIGYRTGGTIHVVVNNQIGFTTVSAHA 414 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P + V+G + AV A + + I+++++ YR GH+ Sbjct: 415 YSGLYCTDIAKAVQAPILHVNGDEPEAVVYCARLAADFRQKFATDIVLDIVGYRRHGHNE 474 Query: 290 SDPANY 295 SD ++ Sbjct: 475 SDEPSF 480 >gi|74211765|dbj|BAE29234.1| unnamed protein product [Mus musculus] Length = 1023 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRNTFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|310779279|ref|YP_003967612.1| transketolase subunit A [Ilyobacter polytropus DSM 2926] gi|309748602|gb|ADO83264.1| transketolase subunit A [Ilyobacter polytropus DSM 2926] Length = 277 Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 2/122 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A + K D V GDG +GQV+E+ +A + L N+ ++ Sbjct: 116 GSLGQGLSVANGMALSAKISGEDYRTYVLMGDGELQEGQVWEAAMTSAHYKLDNICAFVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + +V K+ SF ++ DG + +++KA C+ II Sbjct: 176 YNNLQIDGNVDEIMGVAPLDKKWESFGWNVIKADGHSFEEILDSLEKA-KECKGKPTVII 234 Query: 277 IE 278 E Sbjct: 235 AE 236 >gi|270295521|ref|ZP_06201722.1| transketolase [Bacteroides sp. D20] gi|270274768|gb|EFA20629.1| transketolase [Bacteroides sp. D20] Length = 277 Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 2/115 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G GIA A K + + V GDG +G +YE+ A + L N++ VI+ Sbjct: 114 GALGHGLSVGVGIAMAAKMDKRNYKTYVLMGDGEQGEGSIYEAAMAARQYKLDNLVAVID 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 N + + R +F ++G D+ + T +++ Y H Sbjct: 174 RNHLQISGDTEDVMGIDDIRDRWTAFGWEVKDMNGDDMEDIIRTF-RSIDYANHH 227 >gi|268611667|ref|ZP_06145394.1| Transketolase domain protein [Ruminococcus flavefaciens FD-1] Length = 279 Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust. Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K GDG +GQV+E+ AA + L N++ V++ Sbjct: 117 GSLGQGISAACGMALAGKIDGKSYNVYTILGDGEIEEGQVWEAAMFAAHYGLGNLVAVVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + ++ + + + +F + +D D ++ A ++A Sbjct: 177 NNGLQIDGPITEVCSPEPITDKFAAFGWHVITMDAHDFDSIDAAFEEA 224 >gi|229816478|ref|ZP_04446778.1| hypothetical protein COLINT_03531 [Collinsella intestinalis DSM 13280] gi|229807945|gb|EEP43747.1| hypothetical protein COLINT_03531 [Collinsella intestinalis DSM 13280] Length = 598 Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust. Identities = 59/259 (22%), Positives = 109/259 (42%), Gaps = 31/259 (11%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL---- 99 +S ++L A L LL E + L VGG IG +V + ++L Sbjct: 6 ISSPQDVKDLDAADLPLLCS--EIRQAILSSSASVGGH----IGSNLGVVELTVALHRVF 59 Query: 100 -TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 + D++I +++ + H + G A+ + AE G G + +FS G Sbjct: 60 DSPTDKLIFDVSHQTYAHKMLTGRAANYLDAERFGGLSGFTSPTESEHDLFSV------G 113 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 H VSL G+A A +D V GDG+ + G +E F+ A VI ++ Sbjct: 114 H--TSTSVSLACGMAKARDLMGADYNVVAVIGDGSISGGLAFEGFDNLAELGTGVIVIVN 171 Query: 217 NNQYAMGTS---VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV-----KATMDKAVAYC 268 +N +++ + + R A+ S+ N + G+D R + +A +++A+ Sbjct: 172 DNGWSIAENHGGIYRNLAELRESEGAAPNNF--FRSLGLDYRFLANGNDEAAVERALLEL 229 Query: 269 RAHKGPIIIEMLTYRYRGH 287 R P+++ + T + G+ Sbjct: 230 RDIDHPVVLHVCTVKGSGY 248 >gi|297192129|ref|ZP_06909527.1| alpha-ketoglutarate decarboxylase [Streptomyces pristinaespiralis ATCC 25486] gi|297151224|gb|EFH31038.1| alpha-ketoglutarate decarboxylase [Streptomyces pristinaespiralis ATCC 25486] Length = 1117 Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 8/127 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A A QG V E+ N++ L ++V+ NNQ +G + + S++++ Sbjct: 532 LPIALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAAPESSRSSMYA 589 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 V+ I P V+G D AV A + +A ++I+++ YR RGH+ D ++ Sbjct: 590 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICYRRRGHNEGDNPSF 649 Query: 296 RTREEIN 302 + N Sbjct: 650 TNPQMYN 656 >gi|152990140|ref|YP_001355862.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratiruptor sp. SB155-2] gi|166198632|sp|A6Q1Z6|DXS_NITSB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|151422001|dbj|BAF69505.1| 1-deoxy-D-xylulose 5-phosphate synthase [Nitratiruptor sp. SB155-2] Length = 599 Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%) Query: 130 TGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFG 188 T RQ GGIS G + S + + GH +SL G A A + D++ VV G Sbjct: 80 TLRQFGGIS---GYTKPKESPYDYWVAGHS--STSISLAVGAAKAIALKNEDRVPVVLIG 134 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 DGA + G VYE+ N V+ ++ +N+ ++ + S Sbjct: 135 DGAMSAGMVYEALNELGDRKYPVVIILNDNEMSIAKPIGAVS 176 >gi|113868300|ref|YP_726789.1| 2-oxoglutarate dehydrogenase E1 component [Ralstonia eutropha H16] gi|124106292|sp|Q59106|ODO1_RALEH RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|113527076|emb|CAJ93421.1| 2-Oxoglutarate dehydrogenase (E1) [Ralstonia eutropha H16] Length = 950 Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRR-----SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A + RR + + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 336 GSAKARQERRGEVGHKEVLPVQVHGDAAFAGQGVVMETLNLAQTRGYGTGGSMHIVINNQ 395 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV M AV + K ++++ Sbjct: 396 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVYAMQLAVDFRMEFKKDVVVD 455 Query: 279 MLTYRYRGHSMSD 291 ++ +R GH+ D Sbjct: 456 IICFRKLGHNEQD 468 >gi|111599858|gb|AAI17995.1| Dehydrogenase E1 and transketolase domain containing 1 [Mus musculus] Length = 921 Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 13/140 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 IC+ GD + QG V E+F ++ L + + I++I NNQ T R + S Sbjct: 327 ICLQVHGDASFCGQGIVLETFTLSNLPHFRIGGSIHLIVNNQLGYTTPAERGRSSLYSSD 386 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSD 291 G + V+G V A Y R + +I+++L YR G + ++ Sbjct: 387 IGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIVDLLCYRQWGRNELDEPFFTN 446 Query: 292 PANY---RTREEINEMRSNH 308 P Y R R+ I + + H Sbjct: 447 PVMYKIIRARKSIPDTYAEH 466 >gi|90425357|ref|YP_533727.1| transketolase-like [Rhodopseudomonas palustris BisB18] gi|90107371|gb|ABD89408.1| transketolase subunit A [Rhodopseudomonas palustris BisB18] Length = 279 Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 14/162 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A + R V GDG +GQ +E+F +A L N++ V++ Sbjct: 120 GSLGQGLSVAAGLAHGLRIRGQRSRVVCLLGDGEMQEGQNWEAFMVANALRLGNLLAVVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + +F G +VDG D +A+ ++ VA R + P + Sbjct: 180 RNGLQNDGPTESIVPLESLVAKAEAFGWHGCEVDGHDFQALNHAIE--VAQSRQDR-PSL 236 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 I T + +G S + ++++ +H P+ R+ Sbjct: 237 IVARTVKGKGVSFME----------DQVKWHHHPLSPEEYRV 268 >gi|325571134|ref|ZP_08146706.1| acetolactate synthase large subunit [Enterococcus casseliflavus ATCC 12755] gi|325156219|gb|EGC68405.1| acetolactate synthase large subunit [Enterococcus casseliflavus ATCC 12755] Length = 566 Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 24/138 (17%) Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 GG G +G + G G+ FA+ +K+ VV GDG + F I + LNV +V Sbjct: 418 GGLGTMGYGIPAGIGVQFAH----PEKMVVVFVGDGGFQMTN--QEFAILNEYGLNVKFV 471 Query: 215 IENNQ------------YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 + NN+ + S S + Q +F K ++ I G ++D + Sbjct: 472 LLNNRSLGMVRQWQETFHGKRRSASVFAQQPDFVKLAQAYGIEGCRIDE------PTQLS 525 Query: 263 KAVAYCRAHKGPIIIEML 280 +A AH GP +IE++ Sbjct: 526 AMLAEAFAHTGPQLIEVM 543 >gi|326561808|gb|EGE12143.1| 2-oxoglutarate dehydrogenase E1 component [Moraxella catarrhalis 7169] gi|326568967|gb|EGE19036.1| 2-oxoglutarate dehydrogenase E1 component [Moraxella catarrhalis BC1] Length = 951 Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 20/166 (12%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK----------ICVVCFGDG 190 GG MH+ F H + + V G+ A + RRS+K + +V GD Sbjct: 311 GGEMHL---ALAFNPSHLEIVSPVLQGS--VRARQARRSEKYGLQIDNSTVLPLVVHGDA 365 Query: 191 A-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIP 245 A A QG E+F ++ A ++++ NNQ TS + T + + + P Sbjct: 366 ALAGQGVNQETFQMSQTRAYKTGGTVHIVINNQVGFTTSRIEDARSTEYCTDVAKMVHAP 425 Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + V+G D AV AV Y R +++++ YR GH+ SD Sbjct: 426 ILHVNGDDPEAVVFASQLAVDYRREFGKDVMLDIFCYRRNGHNESD 471 >gi|302557308|ref|ZP_07309650.1| transketolase [Streptomyces griseoflavus Tu4000] gi|302474926|gb|EFL38019.1| transketolase [Streptomyces griseoflavus Tu4000] Length = 615 Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 9/128 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSD----KICVVCFGDGAANQGQVYESFNIAALWNL-NVI 212 G +G + +G GIA A K R D ++ V+C GD +G V+E+ AA NL N+ Sbjct: 115 GSLGQGLPVGVGIALAGK--RLDHADYRVWVLC-GDSELAEGSVWEAAEQAAYENLDNLT 171 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +++ N+ +++R +F ++VDG D+ AV +A++ R Sbjct: 172 LIVDVNRLGQRGPTRHGHDLDAYARRFQAFGWHTVEVDGHDVDAVDRAYGEALS-TRGQP 230 Query: 273 GPIIIEML 280 II L Sbjct: 231 SAIIARTL 238 >gi|225407921|ref|ZP_03761110.1| hypothetical protein CLOSTASPAR_05142 [Clostridium asparagiforme DSM 15981] gi|225042558|gb|EEG52804.1| hypothetical protein CLOSTASPAR_05142 [Clostridium asparagiforme DSM 15981] Length = 284 Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 6/122 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K + D GDG +G V+E A+ + L N+ V++ Sbjct: 113 GSLGHGLPVCVGMALAGKMDQKDYRVYTVMGDGELAEGSVWEGVMSASHYKLDNLCAVVD 172 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N+ + S + +R SF + DG DI ++D A R+ KG P Sbjct: 173 RNRLQISGSTEDIMHHDDLEQRFSSFGWHVVTADGNDI----PSLDGAFEEARSQKGRPT 228 Query: 276 II 277 ++ Sbjct: 229 VV 230 >gi|326563244|gb|EGE13511.1| 2-oxoglutarate dehydrogenase E1 component [Moraxella catarrhalis 46P47B1] Length = 951 Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 20/166 (12%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK----------ICVVCFGDG 190 GG MH+ F H + + V G+ A + RRS+K + +V GD Sbjct: 311 GGEMHL---ALAFNPSHLEIVSPVLQGS--VRARQARRSEKYGLQIDNSTVLPLVVHGDA 365 Query: 191 A-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIP 245 A A QG E+F ++ A ++++ NNQ TS + T + + + P Sbjct: 366 ALAGQGVNQETFQMSQTRAYKTGGTVHIVINNQVGFTTSRIEDARSTEYCTDVAKMVHAP 425 Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + V+G D AV AV Y R +++++ YR GH+ SD Sbjct: 426 ILHVNGDDPEAVVFASQLAVDYRREFGKDVMLDIFCYRRNGHNESD 471 >gi|149704812|ref|XP_001496666.1| PREDICTED: similar to oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Equus caballus] Length = 1023 Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|115496742|ref|NP_001069498.1| 2-oxoglutarate dehydrogenase, mitochondrial precursor [Bos taurus] gi|122143599|sp|Q148N0|ODO1_BOVIN RecName: Full=2-oxoglutarate dehydrogenase, mitochondrial; AltName: Full=2-oxoglutarate dehydrogenase complex component E1; Short=OGDC-E1; AltName: Full=Alpha-ketoglutarate dehydrogenase; Flags: Precursor gi|109939756|gb|AAI18107.1| Oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Bos taurus] gi|296488370|gb|DAA30483.1| 2-oxoglutarate dehydrogenase, mitochondrial precursor [Bos taurus] Length = 1023 Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|307267490|ref|ZP_07548974.1| Transketolase domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306917483|gb|EFN47773.1| Transketolase domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 274 Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + V GDG +GQ++E+ AA + L N+ +++ Sbjct: 116 GSLGQGLSAANGMALAGKLDKKGYRVYVILGDGELQEGQIWEAAMTAAHYKLDNLTAILD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + +++ +F +++DG D + DKA+ +A KG P Sbjct: 176 FNGLQIDGPNREVKNIEPVNEKFKAFGWHVIEIDGHDFDQI----DKAIEEAKATKGKPT 231 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 232 LIIAHTIKGKGVSF 245 >gi|328697390|ref|XP_003240325.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like isoform 4 [Acyrthosiphon pisum] Length = 1066 Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust. Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 4/162 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG VYE+F+++ L + I+++ NNQ T + + + Sbjct: 419 MSLLLHGDAAFCGQGVVYETFHLSDLPDYTTHGTIHIVVNNQIGFTTDPRHSRSSPYCTD 478 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV + A + ++I++++YR GH+ D + Sbjct: 479 VARVVNAPIFHVNSDDPEAVMHVCNIAAEWRNVFHKDVVIDLVSYRRYGHNEIDEPMFTQ 538 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 ++ +++ +L+ K ++ ++K++ KI Sbjct: 539 PIMYKVIKKTPPVLDKYADKLIEEKVVTKEEVKDVWDKYDKI 580 >gi|298717626|ref|YP_003730268.1| transketolase-like protein [Pantoea vagans C9-1] gi|298361815|gb|ADI78596.1| transketolase-like protein [Pantoea vagans C9-1] Length = 280 Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 7/132 (5%) Query: 153 FYGGHGIVGAQVSLGTGIA----FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 + G I G + G GIA K + S DG N+G +E+ A+ W Sbjct: 113 YTPGMEITGGSLGHGLGIAVGACLGLKQKGSQARIYNLLSDGELNEGSTWEAAMSASHWQ 172 Query: 209 L-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 L N+I +I+ NNQ A G S S A +R +F +VDG DI A++ D A + Sbjct: 173 LDNLIAIIDVNNQQADGHS-SEILAFEPIVERWQAFGWYTQRVDGNDIAALQHAFDAARS 231 Query: 267 YCRAHKGPIIIE 278 + II + Sbjct: 232 WPEPQPRVIICD 243 >gi|220913124|ref|YP_002488433.1| alpha-ketoglutarate decarboxylase [Arthrobacter chlorophenolicus A6] gi|219860002|gb|ACL40344.1| 2-oxoglutarate dehydrogenase, E1 subunit [Arthrobacter chlorophenolicus A6] Length = 1266 Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 18/159 (11%) Query: 158 GIVGA-QVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---I 212 GIV A Q L G AF + ++ GD A A QG V E+ N++ L I Sbjct: 658 GIVRAKQDRLDQGEAFP-------VLPIMVHGDAAFAGQGVVAETLNLSQLRGYRTGGTI 710 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +V+ NNQ T+ S + + T + P V+G D AV A + + Sbjct: 711 HVVVNNQVGFTTAPSSSRSSTYSTDVAKMIQAPVFHVNGDDPEAVVRIGQLAYEFRQRFH 770 Query: 273 GPIIIEMLTYRYRGH------SMSDPANYRTREEINEMR 305 ++I+M+ YR RGH SM+ P Y E +R Sbjct: 771 KDVVIDMVCYRRRGHNEGDDPSMTQPMMYNLIEAKRSVR 809 >gi|1279201|emb|CAA62980.1| oxoglutarate dehydrogenase (E1) [Ralstonia eutropha H16] gi|1588694|prf||2209294B 2-oxoglutarate dehydrogenase Length = 950 Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRR-----SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A + RR + + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 336 GSAKARQERRGEVGHKEVLPVQVHGDAAFAGQGVVMETLNLAQTRGYGTGGSMHIVINNQ 395 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV M AV + K ++++ Sbjct: 396 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVYAMQLAVDFRMEFKKDVVVD 455 Query: 279 MLTYRYRGHSMSD 291 ++ +R GH+ D Sbjct: 456 IICFRKLGHNEQD 468 >gi|313906302|ref|ZP_07839645.1| Transketolase domain protein [Eubacterium cellulosolvens 6] gi|313468858|gb|EFR64217.1| Transketolase domain protein [Eubacterium cellulosolvens 6] Length = 280 Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 11/155 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K GDG +GQV+E+ A L N++ +++ Sbjct: 116 GSLGQGISAAVGMAMSAKIYGDSYRTFTLLGDGETEEGQVWEAAMFAGNHGLDNLVAIVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKA--------VAY 267 NN + ++ ++ K+ +FN + V DG D ++A +A V Sbjct: 176 NNNLQIDGPITEVNSPYPLDKKFAAFNWHVINVADGNDFEQLRAAFTEAASVKGMPTVII 235 Query: 268 CRAHKGPIIIEMLT-YRYRGHSMSDPANYRTREEI 301 C+ KG + M + G + SD + EE+ Sbjct: 236 CKTVKGKGVSFMENQVGWHGKAPSDEEYAKAMEEL 270 >gi|301166418|emb|CBW25994.1| putative transketolase [Bacteriovorax marinus SJ] Length = 663 Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 9/122 (7%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN----IAALW 207 G Y +G +G+ V G+A A+K +D+ + DG + +G+ E+F+ +A+ Sbjct: 141 GVYLSNGPLGSGVPQAQGLALADKIIGNDRTTICLLSDGGSMEGETKEAFSAIPGLASKG 200 Query: 208 NLN-VIYVIENNQYAMGTSVSRASAQTNFSKRGVS---FNIPGMQVDGMDIRAVKATMDK 263 +N + +I +N + + S N S +S +N+ + +G D++AV TM+K Sbjct: 201 KMNPFVLIISDNNTKLSGRIEADSFSMNPSFEAMSALGWNVI-HEENGNDLQAVHNTMEK 259 Query: 264 AV 265 A+ Sbjct: 260 AI 261 >gi|291562668|emb|CBL41484.1| 1-deoxy-D-xylulose-5-phosphate synthase [butyrate-producing bacterium SS3/4] Length = 623 Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISKGKG-GSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 L+GR+ G + G M F S + F GH +S G G+A A + D Sbjct: 80 LSGRKAGFDDLRQFGGMSGFPKRKESPYDAFDTGHS--STSISAGLGLAQAREITEEDYS 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + GDGA G YE+ N AA N I V+ +N+ ++ +V Sbjct: 138 VISVIGDGALTGGMAYEALNNAAQIRKNFIIVLNDNEMSISRNV 181 >gi|62945278|ref|NP_001017461.1| 2-oxoglutarate dehydrogenase, mitochondrial precursor [Rattus norvegicus] gi|81883712|sp|Q5XI78|ODO1_RAT RecName: Full=2-oxoglutarate dehydrogenase, mitochondrial; AltName: Full=2-oxoglutarate dehydrogenase complex component E1; Short=OGDC-E1; AltName: Full=Alpha-ketoglutarate dehydrogenase; Flags: Precursor gi|53734284|gb|AAH83811.1| Oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Rattus norvegicus] gi|149047676|gb|EDM00346.1| similar to oxoglutarate dehydrogenase (lipoamide), isoform CRA_f [Rattus norvegicus] Length = 1023 Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRNTFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|75907877|ref|YP_322173.1| transketolase [Anabaena variabilis ATCC 29413] gi|75701602|gb|ABA21278.1| Transketolase [Anabaena variabilis ATCC 29413] Length = 629 Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust. Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 2/111 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICV-VCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + +G G+ A KY V V GD +G V+E+F+ AA + L N+I +I Sbjct: 118 GSLGQGLPIGVGLGLAGKYLDQLPYNVWVLLGDSETAEGSVWEAFDHAAHYTLDNLIAII 177 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 + N+ ++ R +F +++DG ++ + A++ Sbjct: 178 DVNRLGQRGQTELGWNTQAYANRAKAFGWQAIEIDGHNLTEIDQAFSAAIS 228 >gi|328473395|gb|EGF44243.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio parahaemolyticus 10329] Length = 941 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS R + T Sbjct: 350 SKVLPITIHGDSAIAGQGVVAETFNMSLARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|313114727|ref|ZP_07800229.1| transketolase, thiamine diphosphate binding domain protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310622952|gb|EFQ06405.1| transketolase, thiamine diphosphate binding domain protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 283 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 4/130 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A K+ GDG +G+ +E+F AA + L N+ V++ Sbjct: 118 GSLGQGISAACGMALGAKHAGKPINVYTIVGDGEVEEGECWEAFMFAAHYGLSNLCVVLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + ++ +FN + +DG D ++A M A+ P Sbjct: 178 RNHLQIDGTTETVMNSAPLEEKLKAFNFNVVTIDGHDYDQIEAAMQ---AFHAETAKPTC 234 Query: 277 IEMLTYRYRG 286 I M T + +G Sbjct: 235 IIMDTTKGKG 244 >gi|301092755|ref|XP_002997230.1| 2-oxoglutarate dehydrogenase, putative [Phytophthora infestans T30-4] gi|262111501|gb|EEY69553.1| 2-oxoglutarate dehydrogenase, putative [Phytophthora infestans T30-4] Length = 948 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 3/111 (2%) Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGV 240 ++ GD + QG V E+ ++L + I+VI NNQ T A + + Sbjct: 333 ILIHGDASMFQGSVREALGFSSLEDFRTGGTIHVIINNQIGFTTLPKNADSAVYCTDVAK 392 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV M AV Y + + + I+++ YR GH+ D Sbjct: 393 VSRSPIFHVNADDPEAVAKVMRIAVEYRQMFQCDVTIDLVCYRRHGHNEQD 443 >gi|194375834|dbj|BAG57261.1| unnamed protein product [Homo sapiens] Length = 974 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 355 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 414 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 415 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 470 >gi|56206143|emb|CAI24406.1| oxoglutarate dehydrogenase (lipoamide) [Mus musculus] gi|148708636|gb|EDL40583.1| oxoglutarate dehydrogenase (lipoamide), isoform CRA_c [Mus musculus] Length = 1034 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 415 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 474 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 475 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRNTFHKDVVVDLVCYRRNGHNEMDEP 530 >gi|28897621|ref|NP_797226.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio parahaemolyticus RIMD 2210633] gi|153838588|ref|ZP_01991255.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio parahaemolyticus AQ3810] gi|260365986|ref|ZP_05778471.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Vibrio parahaemolyticus K5030] gi|260878224|ref|ZP_05890579.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Vibrio parahaemolyticus AN-5034] gi|260895661|ref|ZP_05904157.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Vibrio parahaemolyticus Peru-466] gi|260901289|ref|ZP_05909684.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Vibrio parahaemolyticus AQ4037] gi|28805833|dbj|BAC59110.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio parahaemolyticus RIMD 2210633] gi|149748006|gb|EDM58865.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio parahaemolyticus AQ3810] gi|308088187|gb|EFO37882.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Vibrio parahaemolyticus Peru-466] gi|308090183|gb|EFO39878.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Vibrio parahaemolyticus AN-5034] gi|308109845|gb|EFO47385.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Vibrio parahaemolyticus AQ4037] gi|308111258|gb|EFO48798.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Vibrio parahaemolyticus K5030] Length = 941 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS R + T Sbjct: 350 SKVLPITIHGDSAIAGQGVVAETFNMSLARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|291537870|emb|CBL10981.1| Transketolase, N-terminal subunit [Roseburia intestinalis XB6B4] Length = 278 Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 12/144 (8%) Query: 158 GIVGAQVSLGTGIAFAN------KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 GI + SLG G++ A K+ + D GDG +GQ++E+ A L N Sbjct: 109 GIDMSSGSLGQGLSAAAGMAAAGKFDKKDYRVYALCGDGEIQEGQIWEAAMWAGFRKLDN 168 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 ++ +++NN + +V + K+ +FN + ++G D ++A +A R Sbjct: 169 LVVIVDNNNLQIDGTVDEVCSPYPIDKKFEAFNFHTININGNDFDEIRAAFKEA----RE 224 Query: 271 HKG-PIIIEMLTYRYRGHSMSDPA 293 KG P I T + +G S + A Sbjct: 225 TKGMPTAIIAKTVKGKGVSFMENA 248 >gi|256751522|ref|ZP_05492399.1| Transketolase domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|256749606|gb|EEU62633.1| Transketolase domain protein [Thermoanaerobacter ethanolicus CCSD1] Length = 227 Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + V GDG +GQ++E+ AA + L N+ +++ Sbjct: 69 GSLGQGLSAANGMALAGKLDKKGYRVYVILGDGELQEGQIWEAAMTAAHYKLDNLTAILD 128 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + +++ +F +++DG D + DKA+ +A KG P Sbjct: 129 FNGLQIDGPNREVKNIEPVNEKFNAFGWHVIEIDGHDFDQI----DKAIEEAKATKGKPT 184 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 185 LIIAHTIKGKGVSF 198 >gi|194380878|dbj|BAG64007.1| unnamed protein product [Homo sapiens] Length = 812 Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 193 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 252 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 253 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 308 >gi|212690599|ref|ZP_03298727.1| hypothetical protein BACDOR_00085 [Bacteroides dorei DSM 17855] gi|237709634|ref|ZP_04540115.1| transketolase [Bacteroides sp. 9_1_42FAA] gi|212666845|gb|EEB27417.1| hypothetical protein BACDOR_00085 [Bacteroides dorei DSM 17855] gi|229456270|gb|EEO61991.1| transketolase [Bacteroides sp. 9_1_42FAA] Length = 281 Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust. Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 1/104 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A A K ++D V GDG +G +YE+ + L N++ +I+ Sbjct: 114 GALGHGLSVGVGMAIAAKMDKADYKTYVLMGDGEQGEGSIYEAAMAGNQYKLDNLVAIID 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+ + + + + R +F ++++G ++ + T Sbjct: 174 RNRLQISGTTEEVMSLESMRDRWTAFGWDVLEMNGDEMEDIIRT 217 >gi|56206141|emb|CAI24404.1| oxoglutarate dehydrogenase (lipoamide) [Mus musculus] Length = 1019 Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 400 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 459 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 460 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRNTFHKDVVVDLVCYRRNGHNEMDEP 515 >gi|114330866|ref|YP_747088.1| alpha-ketoglutarate decarboxylase [Nitrosomonas eutropha C91] gi|114307880|gb|ABI59123.1| 2-oxoglutarate dehydrogenase E1 component [Nitrosomonas eutropha C91] Length = 952 Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 16/144 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A ++R DK + V+ GD + A QG V E+ N++ ++++ NNQ Sbjct: 341 GSVRARQHRIGDKNGDLIVPVLIHGDASFAGQGVVMETLNLSQTRGYGTGGTVHIVINNQ 400 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V + P + V+G D AV + A+ + + I I+ Sbjct: 401 IGFTTSDPRDSRSTLYCTDVVKMIDAPVLHVNGDDPDAVILATEIALDFRMQFRKDIAID 460 Query: 279 MLTYRYRGHSMSD------PANYR 296 ++ +R GH+ D P+ YR Sbjct: 461 LVCFRKLGHNEQDEPMVTQPSMYR 484 >gi|323487289|ref|ZP_08092589.1| transketolase domain-containing protein [Clostridium symbiosum WAL-14163] gi|323694274|ref|ZP_08108450.1| transketolase domain-containing protein [Clostridium symbiosum WAL-14673] gi|323399334|gb|EGA91732.1| transketolase domain-containing protein [Clostridium symbiosum WAL-14163] gi|323501747|gb|EGB17633.1| transketolase domain-containing protein [Clostridium symbiosum WAL-14673] Length = 282 Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust. Identities = 32/141 (22%), Positives = 68/141 (48%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A + + + + V GDG +G V+E+ A+ NL N++ +++ Sbjct: 124 GSLGNGLSVGVGMALSARLHHQNYMTYVMLGDGEIQEGMVWEAAMAASHHNLKNLVAIVD 183 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + V+ + SF ++V+G +++ + + A + + P + Sbjct: 184 CNGVQINGWVNDIMTVEPLGDKWRSFGWRVVEVNGHNMKDILTALHTA----KTMRCPTV 239 Query: 277 IEMLTYRYRGHS-MSDPANYR 296 I M T + +G S M D +++ Sbjct: 240 ILMRTVKGKGVSFMEDDSSWH 260 >gi|315647981|ref|ZP_07901082.1| 2-oxoglutarate dehydrogenase, E1 subunit [Paenibacillus vortex V453] gi|315276627|gb|EFU39970.1| 2-oxoglutarate dehydrogenase, E1 subunit [Paenibacillus vortex V453] Length = 958 Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 7/177 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A +G V E+ N L I++I NN+ T + + S Sbjct: 360 LSIQIHGDSAFPGEGIVPETLNFNKLPAYRTGGSIHIIVNNRIGFTTEGKDSRSTHYASD 419 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + IP + V+ D A A A Y K I+I+++ YR GH+ +D T Sbjct: 420 LAKGYEIPIIHVNADDPEACIAVARLASDYRNKFKKSILIDLVGYRKYGHNETDDPE-TT 478 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + I + NH + + K+L+ ++ + E++ V +++ NS E +S K+P Sbjct: 479 QPLIYQKVKNHPTVSTLYMKKLVDGNVLTQEQVDELKNRVVEVLKNSYESVKS-KDP 534 >gi|315126695|ref|YP_004068698.1| alpha-ketoglutarate decarboxylase [Pseudoalteromonas sp. SM9913] gi|315015209|gb|ADT68547.1| alpha-ketoglutarate decarboxylase [Pseudoalteromonas sp. SM9913] Length = 939 Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust. Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 18/204 (8%) Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR---SDKICVVCFGDGA-ANQG 195 KGG++HM F H + V +G+ A ++ S + + GD A A QG Sbjct: 311 KGGNVHM---ALAFNPSHLEIVNPVVMGSVRARLDRLNDKTGSKALPITIHGDSAIAGQG 367 Query: 196 QVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDG 251 V E+FN++ + I ++ NNQ TS T++ + P V+ Sbjct: 368 VVQETFNLSQTNAFSCGGSIRIVVNNQVGFTTSKKDDVRSTDYCTDIAKMVQSPIFHVNS 427 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPI 311 D AV A+ + K ++I+++ YR GH+ +D N + I + P+ Sbjct: 428 DDPEAVAFVTQLALDFRNQFKRDVVIDLVCYRRHGHNEADEPN--ATQPIMYQKIKKHPV 485 Query: 312 EQVRKRLLH-NKWASEGDLKEIEM 334 RL++ ++ SEG E E+ Sbjct: 486 ----PRLIYADQLISEGSFTEDEV 505 >gi|313114147|ref|ZP_07799699.1| 1-deoxy-D-xylulose-5-phosphate synthase [Faecalibacterium cf. prausnitzii KLE1255] gi|310623556|gb|EFQ06959.1| 1-deoxy-D-xylulose-5-phosphate synthase [Faecalibacterium cf. prausnitzii KLE1255] Length = 627 Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 73/172 (42%), Gaps = 18/172 (10%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+G K + G S + F GHG +SL G+A+A K + Sbjct: 83 LTGRRGQFDKLRQLDGISGFPNPNESEHDAFIAGHG--NTALSLAIGMAWAKKLHHEAGL 140 Query: 183 CVVCFGDGAANQGQVYESF-NIAALWNLNVIYVIENNQYAMGTSV-SRASAQTNFSKRGV 240 V GDGA G VYE NI L NL VI + +N+ ++ +V + A T+ Sbjct: 141 VVAVIGDGAFTGGMVYEGMNNIEQLDNLLVI--LNDNKMSISKNVGALARYLTHLRTTTA 198 Query: 241 SFNIPGMQVDGMD-IRAVKATMDKAVAYC-----RAHKGPIIIEMLTYRYRG 286 F+ +D + V A + K + C RA + E + ++Y G Sbjct: 199 YFDAKDNVRSFLDGVPLVGAPLKKNITECKTLLRRAMYHSTMFEDMGFQYIG 250 >gi|301777322|ref|XP_002924075.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Ailuropoda melanoleuca] gi|281340693|gb|EFB16277.1| hypothetical protein PANDA_013327 [Ailuropoda melanoleuca] Length = 1023 Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|254294599|ref|YP_003060622.1| 2-oxoglutarate dehydrogenase E1 component [Hirschia baltica ATCC 49814] gi|254043130|gb|ACT59925.1| 2-oxoglutarate dehydrogenase, E1 subunit [Hirschia baltica ATCC 49814] Length = 1004 Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 4/118 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E F ++ L I+ I NNQ TS + + Sbjct: 402 RTKVMPLLLHGDAAFAGQGVVSECFALSGLSGYRTGGTIHFIVNNQIGFTTSPKYSRSSP 461 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + + P V+G D AV A Y + ++I+M YR GH+ D Sbjct: 462 YPTDVALQVQAPIFHVNGDDPEAVVHAAKVATEYRQKFGKDVVIDMFCYRRFGHNEGD 519 >gi|227832837|ref|YP_002834544.1| 2-oxoglutarate dehydrogenase E1 component [Corynebacterium aurimucosum ATCC 700975] gi|227453853|gb|ACP32606.1| 2-oxoglutarate dehydrogenase E1 component [Corynebacterium aurimucosum ATCC 700975] Length = 1120 Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 9/156 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD + G V E+ N++ L ++V+ NNQ T+ + + Sbjct: 529 VPIMLHGDASFTGLGVVQETINLSQLRGYTTGGTVHVVVNNQVGFTTTPDSGRSTHYATD 588 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 F+ P V+G + AV A Y R + I+++ YR RGH+ +D + T Sbjct: 589 LAKGFDCPVFHVNGDNPEAVVWVGKLATEYRRRFGKDVFIDLVCYRLRGHNEADDPSM-T 647 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 + ++ ++ +H + VR+R + GDL + E Sbjct: 648 QPQLYDIIDDH---KSVRERYT-EELIGRGDLSDEE 679 >gi|146342031|ref|YP_001207079.1| putative transketolase N-terminal section (TK) [Bradyrhizobium sp. ORS278] gi|146194837|emb|CAL78862.1| putative transketolase N-terminal section (TK) [Bradyrhizobium sp. ORS278] Length = 282 Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust. Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 5/154 (3%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G + LG G+A A + + + DG N+G V+E+ AA L N Sbjct: 120 GVEAATGSLGHGLPLGCGMALAGRIKGENFRVFALLSDGENNEGSVWEAAMFAAAQKLEN 179 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 V V++ N++ + + +F ++DG D+ A+ M Sbjct: 180 VCVVVDYNKWQATARSNETLMLAPLRDKWAAFGWDAHEIDGHDVGALAEAMQN---IPNG 236 Query: 271 HKGPIIIEMLTYRYRGHS-MSDPANYRTREEINE 303 P+ + T + +G S M D N+ R E Sbjct: 237 SGKPVALIAHTMKGKGVSFMEDDNNWHYRAPTAE 270 >gi|52080630|ref|YP_079421.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus licheniformis ATCC 14580] gi|52786004|ref|YP_091833.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus licheniformis ATCC 14580] gi|319645409|ref|ZP_07999641.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus sp. BT1B_CT2] gi|81385319|sp|Q65IH4|ODO1_BACLD RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|52003841|gb|AAU23783.1| 2-oxoglutarate dehydrogenase (E1 subunit) [Bacillus licheniformis ATCC 14580] gi|52348506|gb|AAU41140.1| OdhA [Bacillus licheniformis ATCC 14580] gi|317392295|gb|EFV73090.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus sp. BT1B_CT2] Length = 944 Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 5/117 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A +G V E+ N++ L V I++I NN T + + + S Sbjct: 356 MAILIHGDAAFPGEGIVAETLNLSQLKGYQVGGAIHIIANNMIGFTTESNESRSTKYASD 415 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 F IP + V+ D A + + AV Y +I+++ YR GH+ M +P+ Sbjct: 416 LAKGFEIPIVHVNADDPEACLSAVQLAVEYRMTFNKDFLIDLIGYRRFGHNEMDEPS 472 >gi|531241|dbj|BAA01393.1| 2-oxoglutarate dehydrogenase precursor [Homo sapiens] Length = 1002 Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|89097491|ref|ZP_01170380.1| OdhA [Bacillus sp. NRRL B-14911] gi|89087787|gb|EAR66899.1| OdhA [Bacillus sp. NRRL B-14911] Length = 946 Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 5/119 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + ++ GD A QG V E+ N++ L I++I NN T + + Sbjct: 353 SSAMAILIHGDAAFPGQGTVAETLNLSQLTGYRTGGTIHIIANNTIGFTTESQDSRSTRY 412 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 S + IP + V+ D AV A A Y +I+++ YR GH+ M +P Sbjct: 413 ASDLAKGYEIPILHVNADDPEAVVAAAQLACEYRAKFNKDFLIDLIGYRRFGHNEMDEP 471 >gi|124267202|ref|YP_001021206.1| 2-oxoglutarate dehydrogenase E1 component [Methylibium petroleiphilum PM1] gi|124259977|gb|ABM94971.1| 2-oxoglutarate dehydrogenase E1 component [Methylibium petroleiphilum PM1] Length = 952 Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 10/125 (8%) Query: 177 RRSDK-----ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVS 227 RR DK + V+ GD A A QG V E+ +A + ++++ NNQ TS Sbjct: 345 RRGDKEGDTVLPVLVHGDAAFAGQGVVMETLALAQTRGYYTGGTVHLVINNQIGFTTSDP 404 Query: 228 RASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S T + V P + V+G D AV A+ Y + ++++++ +R G Sbjct: 405 RDSRSTLYCTDVVKMIEAPVLHVNGDDPEAVVLCTQLALDYRQEFNKDVVVDIICFRKLG 464 Query: 287 HSMSD 291 H+ D Sbjct: 465 HNEQD 469 >gi|270157993|ref|ZP_06186650.1| 2-oxoglutarate dehydrogenase E1 component [Legionella longbeachae D-4968] gi|269990018|gb|EEZ96272.1| 2-oxoglutarate dehydrogenase E1 component [Legionella longbeachae D-4968] Length = 889 Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 27/173 (15%) Query: 159 IVGAQVSLGTGIAFANKYRRSD------KICVVCFGDGA-ANQGQVYESFNIA---ALWN 208 I+G V G A + RR+D + +V GD A A QG V E+FN + Sbjct: 323 IIGPVVE---GSVRARQRRRNDIDKKEKVVPIVIHGDAAFAGQGVVMETFNFSQSRGYCT 379 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 ++++ NNQ TS + T + + P + V+G D AV A + Sbjct: 380 GGTVHIVINNQIGFTTSNPLDARSTLYCTDVAKMVQAPVIHVNGDDPEAVVFATQLAFDF 439 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSD------PANYRTREEINEMRSNHDPIEQV 314 K ++I+++ YR GH+ +D PA Y+ +I MR PI ++ Sbjct: 440 RMKFKRDVVIDLVCYRRHGHNEADEPAVTQPAMYK---KIKSMR----PIREI 485 >gi|150866747|ref|XP_001386444.2| alpha-ketoglutarate dehydrogenase [Scheffersomyces stipitis CBS 6054] gi|149388003|gb|ABN68415.2| alpha-ketoglutarate dehydrogenase [Scheffersomyces stipitis CBS 6054] Length = 1015 Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 6/120 (5%) Query: 176 YRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASA 231 Y+R+ + ++ GD A A QG VYE+ A L + I++I NNQ T + + Sbjct: 396 YKRA--MPILLHGDAAFAGQGVVYETMGFAHLPAYSTGGTIHIIVNNQIGFTTDPRYSRS 453 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 S + N P V+ D+ A + A + +II+++ YR GH+ +D Sbjct: 454 TLYPSDIAKASNSPIFHVNADDVEACIFVFNLAAEWRATFHSDVIIDVVGYRKHGHNETD 513 >gi|149047673|gb|EDM00343.1| similar to oxoglutarate dehydrogenase (lipoamide), isoform CRA_d [Rattus norvegicus] Length = 1034 Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 415 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 474 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 475 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRNTFHKDVVVDLVCYRRNGHNEMDEP 530 >gi|74009728|ref|XP_532722.2| PREDICTED: similar to oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) isoform 1 precursor [Canis familiaris] Length = 881 Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 5/114 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 383 ILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVA 442 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 443 RVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 496 >gi|302418878|ref|XP_003007270.1| 2-oxoglutarate dehydrogenase E1 [Verticillium albo-atrum VaMs.102] gi|261354872|gb|EEY17300.1| 2-oxoglutarate dehydrogenase E1 [Verticillium albo-atrum VaMs.102] Length = 920 Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust. Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 17/197 (8%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG VYE +L + I+++ NNQ T A + + Sbjct: 298 VLLHGDAAFAAQGVVYECLGFHSLPAFSTGGTIHLVVNNQIGFTTDPRFARSTAYCTDIA 357 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 + + P V+ D+ AV A + + +I++++ YR GH+ +D ++ Sbjct: 358 KAIDAPVFHVNADDVEAVNFVCQMAADWRAEFQQDVIVDLVCYRKHGHNETDQPSFTQPL 417 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV----EFAQSDKE--- 352 ++S+ I +L+ + ++ D++E + V ++ S E+ + KE Sbjct: 418 MYKRIQSHKSQIAIYVDKLIKDGTFTKEDVEEHKQWVWGMLEESFTKSKEYQPTSKEWTT 477 Query: 353 ------PDPAELYSDIL 363 P EL +++L Sbjct: 478 SAWNGFKSPKELATEVL 494 >gi|148708639|gb|EDL40586.1| oxoglutarate dehydrogenase (lipoamide), isoform CRA_f [Mus musculus] Length = 1059 Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 440 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 499 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 500 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRNTFHKDVVVDLVCYRRNGHNEMDEP 555 >gi|2160381|dbj|BAA06836.1| 2-oxoglutarate dehydrogenase [Homo sapiens] Length = 1002 Score = 42.7 bits (99), Expect = 0.095, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|269960709|ref|ZP_06175081.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio harveyi 1DA3] gi|269834786|gb|EEZ88873.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio harveyi 1DA3] Length = 941 Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+FN++ V + ++ NNQ TS R + T + + Sbjct: 353 LPITIHGDSAIAGQGVVAETFNMSLARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTMYCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+ D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 413 DIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|163753577|ref|ZP_02160700.1| 1-deoxy-D-xylulose-5-phosphate synthase [Kordia algicida OT-1] gi|161325791|gb|EDP97117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Kordia algicida OT-1] Length = 590 Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 20/151 (13%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIA--FANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 S + F GH +LG IA N + + I VV GD + G +E+ N A Sbjct: 107 SVYDTFGVGHSSTAISAALGMAIASKLQNDFTKQ-HIAVV--GDASIASGMAFEAMNHAG 163 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG----------VSFNIPGMQVDGMDIR 255 + + N++ ++ +N + SV K+G ++F+ G +DG DI Sbjct: 164 VTDTNILIILNDNAIGIDPSVGALKMYLTNVKKGTEKQDNIFEALNFDYSG-PIDGHDIF 222 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 AV A +++ + KGP + ++T + +G Sbjct: 223 AVVAELER----LKTIKGPKFLHVITTKGKG 249 >gi|114613169|ref|XP_001146956.1| PREDICTED: oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) isoform 2 [Pan troglodytes] Length = 1023 Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|332239448|ref|XP_003268915.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial isoform 1 [Nomascus leucogenys] Length = 1023 Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|190895097|ref|YP_001985390.1| putative transketolase, N-terminal subunit [Rhizobium etli CIAT 652] gi|190700758|gb|ACE94840.1| putative transketolase protein, N-terminal subunit [Rhizobium etli CIAT 652] Length = 279 Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 17/145 (11%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K ++S F DG ++G +E+ A + L N+I +++ Sbjct: 119 GSLGHGLGIAVGMALALKRKKSSSFVYNLFSDGELDEGSTWEAAMSAGSYRLDNLIGIVD 178 Query: 217 NNQY-AMGTSVSRASAQTNFSKRGVSFNIPGM---QVDGMDIRAVKATMDKAVAYCRAHK 272 NQ A G S+ NF G F G +VDG DI A+ D A + A Sbjct: 179 VNQMQADGPSI----GVLNFEPLGPKFEAFGWFVQRVDGNDIDALVKAFDAARHHAEAKP 234 Query: 273 GPII--------IEMLTYRYRGHSM 289 II + L R R H + Sbjct: 235 RIIICDTKMAKGVPFLEARDRNHFL 259 >gi|332799614|ref|YP_004461113.1| Transketolase [Tepidanaerobacter sp. Re1] gi|332697349|gb|AEE91806.1| Transketolase [Tepidanaerobacter sp. Re1] Length = 273 Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust. Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + V GDG +GQ++E+ +A + L N+ ++ Sbjct: 120 GSLGQGLSAANGMALAAKLDKKSYRVYVVMGDGELEEGQIWEAAMTSAHYKLDNLTAFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 +N + + + + N ++ +F + +DG D++ + +++A Sbjct: 180 HNGLQIDGPIQKVMSPENIHEKFKAFGWNVIDIDGHDMKQILEAVEEA 227 >gi|304438081|ref|ZP_07398024.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368854|gb|EFM22536.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 586 Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 16/150 (10%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G +SL TG+A A + V GDGA + G+ E N+A N+I ++ + Sbjct: 113 GHTSTSISLATGLAKARDLAGRSENVVAFIGDGALSGGEALEGLNVAGEMRSNLIIILND 172 Query: 218 NQYAMGTS------VSRASAQTNFSKRGVSFNIPGMQ----VDGMDIRAVKATMDKAVAY 267 N +++ + + R +TN + F G+ DG D A+ A A A Sbjct: 173 NDWSISENHGGMYEMLRRLRETNGTGADNLFRAMGLDYRYVADGNDTEALIA----AFAA 228 Query: 268 CRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 + + P++I + T + +G S + DP ++ Sbjct: 229 VKDSQKPVVIHIHTQKGKGLSFAEDDPEDW 258 >gi|194385772|dbj|BAG65261.1| unnamed protein product [Homo sapiens] Length = 1019 Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 400 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 459 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 460 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 515 >gi|119945912|ref|YP_943592.1| 2-oxoglutarate dehydrogenase, E1 subunit [Psychromonas ingrahamii 37] gi|119864516|gb|ABM03993.1| 2-oxoglutarate dehydrogenase E1 component [Psychromonas ingrahamii 37] Length = 935 Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 5/166 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+FN++ V + ++ NNQ TS + T F + Sbjct: 351 LPITVHGDAAIAGQGVVQETFNMSQARAFKVGGTVRIVINNQIGFTTSDREDARSTRFCT 410 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 + P V+ D AV A+ + K ++I+++ YR GH+ +D + Sbjct: 411 DIAKMVHAPIFHVNADDAEAVIFVTQIALDFRNTFKRDVVIDLVCYRRHGHNEADEPSAT 470 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 +++++ P E K+L+ +E K++ + R +++ Sbjct: 471 QPLMYKKIKAHATPREIYAKQLVTEGVINEQYAKQLVTDYRDALDS 516 >gi|62287021|sp|Q60HE2|ODO1_MACFA RecName: Full=2-oxoglutarate dehydrogenase, mitochondrial; AltName: Full=2-oxoglutarate dehydrogenase complex component E1; Short=OGDC-E1; AltName: Full=Alpha-ketoglutarate dehydrogenase; Flags: Precursor gi|52782253|dbj|BAD51973.1| oxoglutarate dehydrogenase [Macaca fascicularis] Length = 1023 Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|194289969|ref|YP_002005876.1| 2-oxoglutarate dehydrogenase e1 component [Cupriavidus taiwanensis LMG 19424] gi|193223804|emb|CAQ69811.1| 2-oxoglutarate dehydrogenase E1 component [Cupriavidus taiwanensis LMG 19424] Length = 950 Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N+A ++++ NNQ TS R + T + Sbjct: 354 LPVQVHGDAAFAGQGVVMETLNLAQTRGYGTGGTMHIVINNQIGFTTSDPRDARSTLYCT 413 Query: 238 RGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V P + V+G D AV M AV + K ++++++ +R GH+ D Sbjct: 414 DVVKMIEAPVLHVNGDDPEAVVYAMQLAVDFRMEFKKDVVVDIICFRKLGHNEQD 468 >gi|307721563|ref|YP_003892703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfurimonas autotrophica DSM 16294] gi|306979656|gb|ADN09691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfurimonas autotrophica DSM 16294] Length = 610 Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 11/152 (7%) Query: 79 GGFCHLCIGQEAVIVGM-KMSLTEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IV M K+ ++ D I +++ + H L G + + + G G Sbjct: 33 GGHLSSTLGATEIIVAMHKVFDSQKDPFIFDVSHQAYAHKLLTGRWEEFDTLRQFNGICG 92 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + ST + F GH + +G A A K + ++I VV GDG+ Sbjct: 93 YTKPSE-------STDDYFVAGHSSTSISLGVGAAKAIALKGEQDERIPVVLIGDGSMTA 145 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G VYE+ N ++ ++ +N+ ++ + Sbjct: 146 GMVYEALNELGDRKYPMVIILNDNEMSIAKPI 177 >gi|296209203|ref|XP_002751435.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial isoform 2 [Callithrix jacchus] Length = 1019 Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 400 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 459 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 460 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 515 >gi|291394911|ref|XP_002713895.1| PREDICTED: oxoglutarate dehydrogenase-like isoform 1 [Oryctolagus cuniculus] Length = 1017 Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 398 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 457 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 458 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 513 >gi|259013553|ref|NP_001158508.1| 2-oxoglutarate dehydrogenase, mitochondrial isoform 3 precursor [Homo sapiens] gi|332865087|ref|XP_003318444.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial [Pan troglodytes] Length = 1019 Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 400 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 459 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 460 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 515 >gi|194388154|dbj|BAG65461.1| unnamed protein product [Homo sapiens] Length = 818 Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 5/114 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 201 ILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVA 260 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 261 RVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 314 >gi|83309165|ref|YP_419429.1| putative transketolase N-terminal section [Magnetospirillum magneticum AMB-1] gi|82944006|dbj|BAE48870.1| Putative transketolase N-terminal section [Magnetospirillum magneticum AMB-1] Length = 294 Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 15/135 (11%) Query: 150 KNGFY-GGH-------------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG 195 +NG Y GGH G +G +S+G G+A + + S V GDG N+G Sbjct: 116 RNGSYLGGHPEAGKIPGVEASTGALGHGLSIGVGMALGLRIKASAARVFVAMGDGEINEG 175 Query: 196 QVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 V+E+ A L N+ +++ N+ VS + + +F ++DG D+ Sbjct: 176 SVWEAAMAAGKHRLANLTALVDYNKIQSYGFVSEVQPLEPLADKWRAFGFAVEEIDGHDV 235 Query: 255 RAVKATMDKAVAYCR 269 A+ + A R Sbjct: 236 AALHGALSSPDAESR 250 >gi|197102564|ref|NP_001125317.1| 2-oxoglutarate dehydrogenase, mitochondrial precursor [Pongo abelii] gi|62510773|sp|Q5RCB8|ODO1_PONAB RecName: Full=2-oxoglutarate dehydrogenase, mitochondrial; AltName: Full=2-oxoglutarate dehydrogenase complex component E1; Short=OGDC-E1; AltName: Full=Alpha-ketoglutarate dehydrogenase; Flags: Precursor gi|55727673|emb|CAH90589.1| hypothetical protein [Pongo abelii] Length = 1023 Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|47210299|emb|CAF94599.1| unnamed protein product [Tetraodon nigroviridis] Length = 1070 Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 9/116 (7%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS--VSRASAQTNFSK 237 ++ GD A A QG VYE+F+++ L + ++V+ NNQ T V+R+S Sbjct: 443 ILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRVARSSPYPTDVA 502 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 R V N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 503 RVV--NAPIFHVNADDPEAVIYVCKVAAEWRNTFHKDVVVDLVCYRRMGHNEMDEP 556 >gi|332239450|ref|XP_003268916.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial isoform 2 [Nomascus leucogenys] Length = 1019 Score = 42.7 bits (99), Expect = 0.100, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 400 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 459 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 460 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 515 >gi|156973652|ref|YP_001444559.1| alpha-ketoglutarate decarboxylase [Vibrio harveyi ATCC BAA-1116] gi|156525246|gb|ABU70332.1| hypothetical protein VIBHAR_01355 [Vibrio harveyi ATCC BAA-1116] Length = 941 Score = 42.7 bits (99), Expect = 0.100, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+FN++ V + ++ NNQ TS R + T + + Sbjct: 353 LPITIHGDSAIAGQGVVAETFNMSLARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTMYCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+ D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 413 DIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|51873036|ref|NP_002532.2| 2-oxoglutarate dehydrogenase, mitochondrial isoform 1 precursor [Homo sapiens] gi|332865085|ref|XP_001146811.2| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial isoform 1 [Pan troglodytes] gi|160332299|sp|Q02218|ODO1_HUMAN RecName: Full=2-oxoglutarate dehydrogenase, mitochondrial; AltName: Full=2-oxoglutarate dehydrogenase complex component E1; Short=OGDC-E1; AltName: Full=Alpha-ketoglutarate dehydrogenase; Flags: Precursor gi|13436359|gb|AAH04964.1| Oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Homo sapiens] gi|15779103|gb|AAH14617.1| Oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [Homo sapiens] gi|37674435|gb|AAQ96885.1| unknown [Homo sapiens] gi|119581490|gb|EAW61086.1| oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide), isoform CRA_a [Homo sapiens] gi|119581493|gb|EAW61089.1| oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide), isoform CRA_a [Homo sapiens] gi|123981954|gb|ABM82806.1| oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [synthetic construct] gi|157928306|gb|ABW03449.1| oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) [synthetic construct] Length = 1023 Score = 42.7 bits (99), Expect = 0.100, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|296209201|ref|XP_002751434.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial isoform 1 [Callithrix jacchus] Length = 1034 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 415 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 474 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 475 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 530 >gi|160913589|ref|ZP_02076279.1| hypothetical protein EUBDOL_00065 [Eubacterium dolichum DSM 3991] gi|158434050|gb|EDP12339.1| hypothetical protein EUBDOL_00065 [Eubacterium dolichum DSM 3991] Length = 275 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 4/110 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A ANKY + GDG +GQ++E+ AA + L N++ ++ Sbjct: 116 GSLGQGLSVAVGMALANKYEGNAHRIYTILGDGECQEGQIWEAAMAAAHYKLDNLLAFVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSF--NIPGMQVDGMDIRAVKATMDKA 264 +N + +V T ++ +F N+ ++ DG DI +V ++A Sbjct: 176 HNSLQIDGNVRDVMNPTPIDEKFKAFGWNVITLE-DGNDIESVVKACEEA 224 >gi|149926159|ref|ZP_01914421.1| 2-oxoglutarate dehydrogenase, E1 component [Limnobacter sp. MED105] gi|149824977|gb|EDM84189.1| 2-oxoglutarate dehydrogenase, E1 component [Limnobacter sp. MED105] Length = 976 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 18/165 (10%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-AN 193 GG MH+ F H IV V G A + RR DK + V+ GD A A Sbjct: 338 GGPMHL---SLAFNPSHLEIVNPVVE---GSVKARQERRGDKEGKQVLPVLVHGDAAFAG 391 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVS-FNIPGMQV 249 QG V E+ N+ ++++ NNQ TS R S T + V P V Sbjct: 392 QGVVMETLNLVHTRGYGTGGTVHIVINNQIGFTTSDPRDSRSTLYCSDVVKMIEAPVFHV 451 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 +G D AV A+ + + ++I+++ +R GH+ D PA Sbjct: 452 NGDDPEAVIFVTQLALDFRMEFQQDVVIDIVCFRKLGHNEQDTPA 496 >gi|109066629|ref|XP_001089063.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like isoform 1 [Macaca mulatta] Length = 1023 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|327405284|ref|YP_004346122.1| transketolase [Fluviicola taffensis DSM 16823] gi|327320792|gb|AEA45284.1| Transketolase [Fluviicola taffensis DSM 16823] Length = 280 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 2/125 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G A K D++ GDG +GQ++E+ AA + N+I ++ Sbjct: 118 GSLGQGLSNGIGAALTKKLNNDDRLIYTLHGDGELQEGQIWEAALYAAANKVDNLIATVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + V + + + +F +++DG + + T++KA K PII Sbjct: 178 YNGRQIDGDVDDVLSLGDLKGKWQAFGWEVLEMDGHNYSDLIETLNKAKNMTGNGK-PII 236 Query: 277 IEMLT 281 I M T Sbjct: 237 IIMKT 241 >gi|297288376|ref|XP_002803330.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Macaca mulatta] Length = 1019 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 5/114 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 402 ILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVA 461 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 462 RVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 515 >gi|294676281|ref|YP_003576896.1| oxoglutarate dehydrogenase [Rhodobacter capsulatus SB 1003] gi|294475101|gb|ADE84489.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Rhodobacter capsulatus SB 1003] Length = 989 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 35/177 (19%), Positives = 74/177 (41%), Gaps = 4/177 (2%) Query: 173 ANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSR 228 A+ R+ + V+ GD A A QG V E ++ + I+++ NNQ T+ Sbjct: 381 AHDEDRTQVLSVLLHGDAAFAGQGIVAECLQLSGIKGHRTGGCIHIVVNNQIGFTTAPHF 440 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + + + P V+G D AV A + + ++I++ YR GH+ Sbjct: 441 SRTSPYPTDIALMVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDIFCYRRFGHN 500 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 D + ++ + ++ +RL+ + EG++++++ + +N E Sbjct: 501 EGDEPMFTNPAMYKNIKGHKTTLQLYTERLVADGLIPEGEIEDMKAAFQAKLNEEYE 557 >gi|291394913|ref|XP_002713896.1| PREDICTED: oxoglutarate dehydrogenase-like isoform 2 [Oryctolagus cuniculus] Length = 1013 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 394 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 453 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 454 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 509 >gi|27526313|emb|CAD45181.1| transketolase [Echinococcus multilocularis] Length = 667 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 8/142 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S G+A+ KY K V C GDG + +G ++E+ ++ + L N++ + Sbjct: 116 GSLGQGLSNAAGMAYTGKYIDKAKYRVYCIIGDGESAEGSIWEALAFSSYYKLDNLVAIF 175 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 + N+ + +R +F + VDG +I + + A R+ KG P Sbjct: 176 DVNRLGQSQPACLQHDLDCYRRRVEAFGCHAIVVDGHNIPELLTAFETA----RSIKGKP 231 Query: 275 IIIEMLTYR-YRGHSMSDPANY 295 + + + TY+ Y +SD N+ Sbjct: 232 LALILKTYKGYDFPGISDQENW 253 >gi|116748857|ref|YP_845544.1| deoxyxylulose-5-phosphate synthase [Syntrophobacter fumaroxidans MPOB] gi|116697921|gb|ABK17109.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Syntrophobacter fumaroxidans MPOB] Length = 646 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 50/211 (23%) Query: 130 TGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFG 188 T RQ GGIS G S + F GH G +S G+ A+ + S + G Sbjct: 96 TLRQYGGIS---GFPKRSESKYDAFGTGHS--GTSISAALGMTAAHSLKDSPCRAIAVIG 150 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA----------------- 231 DG+ G +E+ N A N+I V+ +N+ ++ +V SA Sbjct: 151 DGSMTGGMAFEALNHAGDLAKNLIVVLNDNEMSISPNVGALSAFLSRKLSTKSLMNLKKE 210 Query: 232 -----------QTN---FSKRG----VSFNIPGMQVDGMDIRAVKAT----MDKAVAYCR 269 TN KR V+F PGM +D + +D+ + R Sbjct: 211 MERFVRTIPGLGTNIIQIVKRSMDSLVTFFTPGMLFQALDFHYIGPIKGHRLDRLIETLR 270 Query: 270 AHK---GPIIIEMLTYRYRGHSMS--DPANY 295 + GP++I ++T + RG+ + DP ++ Sbjct: 271 TAREIEGPVLIHVMTEKGRGYPPAEIDPTSF 301 >gi|27380537|ref|NP_772066.1| transketolase [Bradyrhizobium japonicum USDA 110] gi|27353701|dbj|BAC50691.1| transketolase [Bradyrhizobium japonicum USDA 110] Length = 282 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 14/131 (10%) Query: 147 FSTKNGFYGGH-------------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 F + GGH G +G +S+G G+A A + R V GDG N Sbjct: 101 FCGPDSILGGHPEYGMVPGVEASTGALGHGLSIGVGLALAARMRERTYRTFVLLGDGEIN 160 Query: 194 QGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 +G V+E+ AA L N++ +I+ N+ + + SF +++G Sbjct: 161 EGSVWEAAMGAAKHGLDNLVALIDYNKLQSYGPTDYVLPLEPLADKWRSFGFAVQELNGH 220 Query: 253 DIRAVKATMDK 263 D+ A++ + + Sbjct: 221 DVGALRTVLKQ 231 >gi|284039873|ref|YP_003389803.1| 2-oxoglutarate dehydrogenase, E1 subunit [Spirosoma linguale DSM 74] gi|283819166|gb|ADB41004.1| 2-oxoglutarate dehydrogenase, E1 subunit [Spirosoma linguale DSM 74] Length = 932 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 5/142 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE +A L ++ + NNQ T A + S Sbjct: 354 MPILIHGDAAVAGQGIVYEVTQMAKLAGYTTGGTVHFVINNQIGFTTDFEDARSSIYCSD 413 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P V+G D AV AV + + I+M+ YR GH+ +D + Sbjct: 414 IAKIIDAPIFHVNGDDPEAVIFCAKLAVEFREKFNRDVFIDMVCYRRYGHNEADEPKFTQ 473 Query: 298 REEINEMRSNHDPIEQVRKRLL 319 N + + +P E + K LL Sbjct: 474 PTMYNIIDKHQNPRE-IYKDLL 494 >gi|153835349|ref|ZP_01988016.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio harveyi HY01] gi|148868140|gb|EDL67299.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio harveyi HY01] Length = 941 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+FN++ V + ++ NNQ TS R + T + + Sbjct: 353 LPITIHGDSAIAGQGVVAETFNMSLARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTMYCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+ D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 413 DIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|17549583|ref|NP_522923.1| alpha-ketoglutarate decarboxylase [Ralstonia solanacearum GMI1000] gi|17431837|emb|CAD18515.1| probable 2-oxoglutarate dehydrogenase e1 decarboxylase component oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 881 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 56/130 (43%), Gaps = 7/130 (5%) Query: 169 GIAFANKYRRSDKIC--VVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAM 222 G+A + D C V+ GD A A QG V E+ N+ V++VI NNQ Sbjct: 290 GMARGHLDEHPDTPCLPVMVHGDAAFAGQGVVMETLNLTRRSGYTAGGVVHVIVNNQIGF 349 Query: 223 GT-SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 T +V A + + P + V+ D AV A+ Y H I+I++L Sbjct: 350 TTPNVMDVRANDYCTDVTRMVDAPVLHVNADDPEAVLRAARIALEYRMEHGADIVIDLLG 409 Query: 282 YRYRGHSMSD 291 YR GHS D Sbjct: 410 YRRLGHSEHD 419 >gi|319787382|ref|YP_004146857.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pseudoxanthomonas suwonensis 11-1] gi|317465894|gb|ADV27626.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pseudoxanthomonas suwonensis 11-1] Length = 943 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 13/132 (9%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG V E F ++ V ++V+ NNQ TS ++ A++ Sbjct: 345 RSKVLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHVVVNNQVGFTTS-NKEDARS 403 Query: 234 NFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ + P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 404 TLYCTDVAKMVGAPVFHVNGDDPEAVVFVATLAYEFRQKFKKDVVIDLVCYRRHGHNEAD 463 Query: 292 ------PANYRT 297 P Y+T Sbjct: 464 EPAATQPVMYQT 475 >gi|311693471|gb|ADP96344.1| 1-deoxy-D-xylulose-5-phosphate synthase [marine bacterium HP15] Length = 643 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 46/209 (22%), Positives = 93/209 (44%), Gaps = 23/209 (11%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 + ++R T +D +D P + +EL+ +L L R E +A L+ +G GG Sbjct: 10 IPSQRPNTPLLDRIDEP----------AQLRELAPEQLTRLAR--ELRAFLLWSVGQTGG 57 Query: 81 FCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGIS 137 +G + V + T D+++ ++ + H + G S M + R+GG++ Sbjct: 58 HFGAGLGVLELTVALHYVFDTPSDRLVWDVGHQAYPHKILTGRKES--MGSIR-RKGGLA 114 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 G S + F GH +S G+A A + +++ + + GDGA G Sbjct: 115 ---GFPKRAESEYDTFGVGHS--STSISAALGMAIAARLQQTGRKSIAVIGDGAMTAGMA 169 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSV 226 +E+ N A + +++ ++ +N ++ +V Sbjct: 170 FEALNHAGHLHADMLVILNDNDMSISRNV 198 >gi|156396604|ref|XP_001637483.1| predicted protein [Nematostella vectensis] gi|156224595|gb|EDO45420.1| predicted protein [Nematostella vectensis] Length = 624 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 7/132 (5%) Query: 158 GIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S G+A+ K + ++ GDG A +G V+E+ + A + L N++ + Sbjct: 124 GSLGQGLSCACGMAYTAKHFDKASYRVFTLLGDGEAAEGAVWEAMHFAGYYKLDNLVAIF 183 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 + N+ S + KR +F + VDG D+ + M +A KG P Sbjct: 184 DVNRLGQSQPTSLEHDMETYRKRAEAFGWNAVVVDGHDVEQICRAMYEA----ENTKGRP 239 Query: 275 IIIEMLTYRYRG 286 I T++ RG Sbjct: 240 TCIIAKTFKGRG 251 >gi|127512584|ref|YP_001093781.1| alpha-ketoglutarate decarboxylase [Shewanella loihica PV-4] gi|126637879|gb|ABO23522.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella loihica PV-4] Length = 940 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 5/113 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKR 238 + GD A A QG V E+FN++ V I ++ NNQ T+++ + T + + Sbjct: 360 ITVHGDSAIAGQGIVQETFNMSQTRAFKVGGSIRIVVNNQVGFTTNLTEDTRSTEYCTDI 419 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D +V AV Y K ++I+++ YR GH+ +D Sbjct: 420 AKMVQAPIFHVNADDPESVAFVAQLAVDYRNEFKRDVVIDLVCYRRHGHNEAD 472 >gi|319779459|ref|YP_004130372.1| 2-oxoglutarate dehydrogenase E1 component [Taylorella equigenitalis MCE9] gi|317109483|gb|ADU92229.1| 2-oxoglutarate dehydrogenase E1 component [Taylorella equigenitalis MCE9] Length = 930 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 61/253 (24%), Positives = 102/253 (40%), Gaps = 34/253 (13%) Query: 63 RRFEEKAGQLYGMGMVGGFCHLC-IGQEAVIVGMKMSLTEGDQMITAYREHGHILA--CG 119 +RF + G+ + +GM H +G + VIVGM A+R ++L G Sbjct: 214 KRFSLEGGESFVVGMDAVVQHAAKLGVKEVIVGM------------AHRGRLNMLINIMG 261 Query: 120 VDASKIMAELTGR-----QGGISKGKGGSMHMFSTKNG-------FYGGHGIVGAQVSLG 167 + + E G+ + G K G T++G + H V V G Sbjct: 262 KSPAILFDEFEGKYATDLKAGDVKYHNGFNSTIDTEHGPIFIDLAYNPSHLEVVNPVVAG 321 Query: 168 TGIAFANKYR-RSDKICVVCFGDGAA-NQGQVYESFNIAA---LWNLNVIYVIENNQYAM 222 T A +Y +++ + V+ GD A QG V E+ N++ N +++I NNQ Sbjct: 322 TAYARQVRYNSKAEILPVLVHGDAAVIGQGVVQETLNLSLAKHYSNAGTVHIIINNQIGF 381 Query: 223 GTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 TS+ + + F + + P V+ D V AV Y + ++++ Sbjct: 382 TTSLKEEARSSQFCTDIAKMVDCPIFHVNADDPEGVAFVCQLAVDYRAKFGNDVFVDIVC 441 Query: 282 YRYRGHSMSD-PA 293 YR GH+ D PA Sbjct: 442 YRKLGHNEQDTPA 454 >gi|168275650|dbj|BAG10545.1| oxoglutarate dehydrogenase [synthetic construct] Length = 1023 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 404 MSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 463 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 464 VARVVNAPIFHVNSGDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 519 >gi|237750223|ref|ZP_04580703.1| 1-deoxyxylulose-5-phosphate synthase [Helicobacter bilis ATCC 43879] gi|229374117|gb|EEO24508.1| 1-deoxyxylulose-5-phosphate synthase [Helicobacter bilis ATCC 43879] Length = 809 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S+ + F GH +SL G A A K R +V GDG+ + G VYE+ N Sbjct: 149 SSLDYFIAGHS--STSLSLAVGAAKAKKLRNDPHKPIVMIGDGSMSAGLVYEALNELGDL 206 Query: 208 NLNVIYVIENNQYAMGTSV 226 L VI ++ +N+ ++ + Sbjct: 207 KLPVIIILNDNEMSIAKPI 225 >gi|315427634|dbj|BAJ49232.1| pyruvate dehydrogenase E1 component subunit alpha [Candidatus Caldiarchaeum subterraneum] Length = 142 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 4/135 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + E L YR M+L R F+ +L G V + GQEAV V + + D + Sbjct: 11 LSDELLLKMYREMVLARLFDSAMVKLQRAGKVAAYTS-SEGQEAVSVAAVNAASPLDWIF 69 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN-GFYGGHGIVGAQVS 165 YRE G +A GV ++A GR G KG + +F K G G V A + Sbjct: 70 PTYRETGAFIARGVPLETLIARQLGRVG--DPLKGHEVLLFGDKRYRIVTGPGPVAAHIP 127 Query: 166 LGTGIAFANKYRRSD 180 + G +A + + D Sbjct: 128 VAVGFGYAARRKGED 142 >gi|296209205|ref|XP_002751436.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial isoform 3 [Callithrix jacchus] Length = 873 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 5/114 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 256 ILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVA 315 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 316 RVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 369 >gi|313897240|ref|ZP_07830784.1| Transketolase, thiamine diphosphate binding domain protein [Clostridium sp. HGF2] gi|312957961|gb|EFR39585.1| Transketolase, thiamine diphosphate binding domain protein [Clostridium sp. HGF2] Length = 268 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 5/111 (4%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G +S GIA+A K R + C+V GDG N+G+V+E+ A L N I + Sbjct: 106 GSLGQGISQAAGIAYALKTMKREGNVFCMV--GDGECNEGEVFEALQFIANKRLNNCIVM 163 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 ++ N+ + + + S +F S +VDG + AV + + + Sbjct: 164 VDCNKKQVDGLLRKVSCDFDFPALLQSIGFHVCEVDGNAVEAVNGKLSECI 214 >gi|225571794|ref|ZP_03780668.1| hypothetical protein CLOHYLEM_07772 [Clostridium hylemonae DSM 15053] gi|225159537|gb|EEG72156.1| hypothetical protein CLOHYLEM_07772 [Clostridium hylemonae DSM 15053] Length = 279 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 14/172 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K D GDG +G V+E A + L N+ V++ Sbjct: 115 GSLGHGLPVCVGMALAGKMNGQDYRVYTVMGDGELAEGSVWEGAMAACQYKLDNLCAVVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 N+ + + + +R +F + V DG DI + A ++A + KG P Sbjct: 175 RNRLQISGNTEDVMGHDDLHERFGAFGWHVIDVADGNDIDQLHAAFEEA----KTVKGQP 230 Query: 275 IIIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 ++ T + +G S M + AN+ + N + + Q+RK L K A+ Sbjct: 231 TVLIANTVKGKGSSVMENKANWHHK------VPNEEELAQIRKDLAERKEAA 276 >gi|254226090|ref|ZP_04919688.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae V51] gi|125621402|gb|EAZ49738.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio cholerae V51] Length = 599 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS R + T Sbjct: 13 SKVLPITIHGDSAIAGQGVVAETFNMSQARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTM 72 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 73 YCTDIAKMVQAPIFHVNSDDPEAVAFVTRLALDYRNEFKRDVVIDLVCYRRHGHNEADEP 132 Query: 294 N 294 N Sbjct: 133 N 133 >gi|332157966|ref|YP_004423245.1| transketolase n-terminal protein [Pyrococcus sp. NA2] gi|331033429|gb|AEC51241.1| transketolase n-terminal protein [Pyrococcus sp. NA2] Length = 215 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 2/105 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ GIA A + D V GDG ++GQ++E+ A+ + L NVI V++ Sbjct: 95 GSLGQGLSVANGIALAKRIDGDDGRVFVILGDGELDEGQIWEAAMTASHYGLDNVIAVVD 154 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 N + S + +++ +F +V D+ +K TM Sbjct: 155 RNFGQLTGSTEEIMRKEPLAEKWKAFGWEVREVRN-DVETIKETM 198 >gi|296532583|ref|ZP_06895288.1| 2-oxoglutarate dehydrogenase E1 component [Roseomonas cervicalis ATCC 49957] gi|296267074|gb|EFH12994.1| 2-oxoglutarate dehydrogenase E1 component [Roseomonas cervicalis ATCC 49957] Length = 959 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 11/145 (7%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 K RRS + ++ GD A A QG VYE+ ++ L ++V+ NNQ T A Sbjct: 360 TKGRRS-VMGILLHGDAAFAGQGVVYETLAMSQLIGYRTGGTVHVVVNNQIGFTTVPLHA 418 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + S P + V+G D AV A Y I+++++ YR GH+ Sbjct: 419 YSGLYCTDVAKSVQAPILHVNGDDPEAVVFCARLAAEYRMQFGADIVLDIVCYRRHGHNE 478 Query: 290 SD------PANYRTREEINEMRSNH 308 +D P Y +E+ R+ + Sbjct: 479 TDEPAFTQPIMYGVIKELKTTRTKY 503 >gi|57209617|emb|CAI41287.1| pyruvate dehydrogenase (lipoamide) alpha 1 [Homo sapiens] Length = 121 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 18/38 (47%), Positives = 23/38 (60%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 +E L YR+M +RR E KA QLY ++ GFCHL Sbjct: 84 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHL 121 >gi|56460609|ref|YP_155890.1| 2-oxoglutarate dehydrogenase E1 component [Idiomarina loihiensis L2TR] gi|56179619|gb|AAV82341.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Idiomarina loihiensis L2TR] Length = 935 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+FN++ V I ++ NNQ TS + T + + Sbjct: 352 LPITIHGDAAVAGQGVVQETFNMSQTRAYRVGGSIRIVVNNQVGFTTSKQEDARSTQYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV A+ Y A + ++I+++ YR GH+ +D Sbjct: 412 DIAKMVQAPIFHVNADDPEAVVFVTQLALDYRNAFQRDVVIDLVCYRRHGHNEAD 466 >gi|70726493|ref|YP_253407.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus haemolyticus JCSC1435] gi|85701150|sp|Q4L6C4|ODO1_STAHJ RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|68447217|dbj|BAE04801.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus haemolyticus JCSC1435] Length = 934 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 29/135 (21%), Positives = 62/135 (45%), Gaps = 5/135 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG +E+ N++ L + +++I NN+ T + T + Sbjct: 352 MPIIIHGDAAYPGQGINFETMNLSNLDGYSTGGALHIITNNRIGFTTEPVDGRSTTYSTD 411 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +++P + V+ D+ A +D A+ + + +I+++ YR GH+ D + Sbjct: 412 IAKGYDVPILHVNADDVEATIEAIDIAMEFRKEFHKDFVIDLVGYRRYGHNEMDEPSITN 471 Query: 298 REEINEMRSNHDPIE 312 + +R HD +E Sbjct: 472 PLPYHNIRK-HDSVE 485 >gi|332865089|ref|XP_003318445.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial [Pan troglodytes] Length = 873 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 5/114 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 256 ILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVA 315 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 316 RVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 369 >gi|332239454|ref|XP_003268918.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial isoform 4 [Nomascus leucogenys] Length = 873 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 5/114 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 256 ILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVA 315 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 316 RVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 369 >gi|307243714|ref|ZP_07525854.1| transketolase, thiamine diphosphate binding domain protein [Peptostreptococcus stomatis DSM 17678] gi|306492923|gb|EFM64936.1| transketolase, thiamine diphosphate binding domain protein [Peptostreptococcus stomatis DSM 17678] Length = 270 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 8/168 (4%) Query: 128 ELTG-RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 EL G RQ I++ GS M NG G +G +S G+A A+K D Sbjct: 88 ELDGFRQ--INEDLQGSPDMLRV-NGIDMSTGSLGQGLSAACGMALASKMDDIDYNVYAL 144 Query: 187 FGDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIP 245 GDG +G V+E+ A + L N++ +++ N + + + + +K+ SF Sbjct: 145 LGDGELQEGMVWEAAMFANQYKLDNLLAIVDMNGLQIDGTTDEVMSLGSIAKKFTSFGWY 204 Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 +++DG D + ++ + + + P+++ T + +G S + A Sbjct: 205 VLEIDGHDFDQIFGALN---TFNKINSKPVLVIANTVKGKGVSFMENA 249 >gi|296236741|ref|XP_002763461.1| PREDICTED: transketolase-like protein 1-like [Callithrix jacchus] Length = 523 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 79 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 138 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + NQ +++ + +R +F VDG D+ A+ +A HK P Sbjct: 139 DMNQLGCSSALPSKHCIDIYRRRCEAFGWNTYVVDGRDVEALCRVFWQASQV--KHK-PT 195 Query: 276 IIEMLTYRYRG 286 + T+R RG Sbjct: 196 AVVAKTFRGRG 206 >gi|219669507|ref|YP_002459942.1| deoxyxylulose-5-phosphate synthase [Desulfitobacterium hafniense DCB-2] gi|254782070|sp|B8FQ45|DXS_DESHD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|219539767|gb|ACL21506.1| deoxyxylulose-5-phosphate synthase [Desulfitobacterium hafniense DCB-2] Length = 631 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 2/87 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G A A R+ V GDGA G +E+ N A Sbjct: 106 SPHDCFETGHS--STSISAAVGFAKARDLRKEKNQVVAVIGDGAMTGGMAFEALNHAGHT 163 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTN 234 N+I V+ +N+ A+ +V S+ N Sbjct: 164 KTNMIVVLNDNEMAIAQNVGAMSSYLN 190 >gi|114571356|ref|YP_758036.1| 2-oxoglutarate dehydrogenase E1 component [Maricaulis maris MCS10] gi|114341818|gb|ABI67098.1| 2-oxoglutarate dehydrogenase E1 component [Maricaulis maris MCS10] Length = 994 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 4/122 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 RS + ++ GD A A QG V E ++ L I+ I NNQ T + + Sbjct: 387 RSSVLPLLLHGDAAFAGQGIVTECLGLSGLRGHRTGGAIHFIVNNQIGFTTDPKDSRSSP 446 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S + P V+G D AV A Y + ++I+M+ YR GH+ D Sbjct: 447 YCSDVALMVQAPIFHVNGDDPEAVTHATRMATEYRQLFGKDVVIDMICYRRYGHNEGDDP 506 Query: 294 NY 295 + Sbjct: 507 TF 508 >gi|225631008|ref|YP_002727799.1| 2-oxoglutarate dehydrogenase E1 component [Wolbachia sp. wRi] gi|225592989|gb|ACN96008.1| 2-oxoglutarate dehydrogenase E1 component [Wolbachia sp. wRi] Length = 881 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 4/161 (2%) Query: 188 GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 GD A QG V E+ ++ + V ++++ NNQ S S A + + S Sbjct: 297 GDAAFIGQGVVAETLTLSNIEGYRVDGIVHIVINNQVGFTASPSCARSSFYCTDIAKSIE 356 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINE 303 P V+G + AV + A+ Y + K ++I+++ YR GH+ D N+ Sbjct: 357 APVFHVNGDNPEAVSFVANLAMEYRQKFKKDVVIDIMCYRKYGHNEGDEPNFTQPLMYKA 416 Query: 304 MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 + + P ++L K + ++ ++ R ++ S+ Sbjct: 417 ISKHKTPGTLYEEKLTAEKVLDDDEVNKLRSEFRAKLDKSL 457 >gi|302872457|ref|YP_003841093.1| Transketolase domain-containing protein [Caldicellulosiruptor obsidiansis OB47] gi|302575316|gb|ADL43107.1| Transketolase domain-containing protein [Caldicellulosiruptor obsidiansis OB47] Length = 282 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 9/164 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A A K V GDG +GQ++E+ AA + L N+ ++ Sbjct: 118 GSLGQGLSVANGMALAGKLDGKSYRVYVLLGDGEIQEGQIWEAAMTAAHYKLDNLTAFLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + ++ + ++ +F +++DG D + + AV + KG P Sbjct: 178 HNGLQIDGKITEVMSPEPVDEKFKAFGWHVIKIDGHDFNQI----ENAVNEAKTVKGKPT 233 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRL 318 II T + +G S M + A + E +E+++K+L Sbjct: 234 IIIAETVKGKGVSFMENEAGWHGTAPNKEQAQK--ALEELQKQL 275 >gi|145480599|ref|XP_001426322.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124393396|emb|CAK58924.1| unnamed protein product [Paramecium tetraurelia] Length = 644 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 7/144 (4%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S+ G+A+++K+ + D V GDG +G V+E+ ++A+ + L N+ ++ Sbjct: 146 GSLGQGLSVAGGMAYSSKFLDKIDNRYWVLMGDGETAEGSVWEAAHLASHYKLDNLTAIV 205 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 + N+ S + KR +F + VDG ++ ++ A CR K P Sbjct: 206 DVNRLGQSEETSIGHDTNVYKKRWEAFGWKTIVVDGHNLN----SLTDAFEQCRNVKNQP 261 Query: 275 IIIEMLTYRYRGHSMSDPANYRTR 298 +I T++ + M + ++ + Sbjct: 262 QVIIAKTFKGKHLEMENKEDWHGK 285 >gi|89895094|ref|YP_518581.1| hypothetical protein DSY2348 [Desulfitobacterium hafniense Y51] gi|118595515|sp|Q24V05|DXS_DESHY RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|89334542|dbj|BAE84137.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 631 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 2/87 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G A A R+ V GDGA G +E+ N A Sbjct: 106 SPHDCFETGHS--STSISAAVGFAKARDLRKEKNQVVAVIGDGAMTGGMAFEALNHAGHT 163 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTN 234 N+I V+ +N+ A+ +V S+ N Sbjct: 164 KTNMIVVLNDNEMAIAQNVGAMSSYLN 190 >gi|289163741|ref|YP_003453879.1| 2-oxoglutarate dehydrogenase, E1 subunit [Legionella longbeachae NSW150] gi|288856914|emb|CBJ10728.1| 2-oxoglutarate dehydrogenase, E1 subunit [Legionella longbeachae NSW150] Length = 934 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 27/173 (15%) Query: 159 IVGAQVSLGTGIAFANKYRRSD------KICVVCFGDGA-ANQGQVYESFNIA---ALWN 208 I+G V G A + RR+D + +V GD A A QG V E+FN + Sbjct: 323 IIGPVVE---GSVRARQRRRNDIDKKEKVVPIVIHGDAAFAGQGVVMETFNFSQSRGYCT 379 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 ++++ NNQ TS + T + + P + V+G D AV A + Sbjct: 380 GGTVHIVINNQIGFTTSNPLDARSTLYCTDVAKMVQAPVIHVNGDDPEAVVFATQLAFDF 439 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSD------PANYRTREEINEMRSNHDPIEQV 314 K ++I+++ YR GH+ +D PA Y+ +I MR PI ++ Sbjct: 440 RMKFKRDVVIDLVCYRRHGHNEADEPAVTQPAMYK---KIKSMR----PIREI 485 >gi|255583239|ref|XP_002532384.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis] gi|223527908|gb|EEF29996.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis] Length = 714 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 65/164 (39%), Gaps = 23/164 (14%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A + + GDGA GQ YE+ N A Sbjct: 174 SVHDAFGAGHS--STSISAGLGMAVARDLLGKNNHVISVIGDGAMTAGQAYEAMNNAGYL 231 Query: 208 NLNVIYVIENNQY----------------AMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 + N+I ++ +N+ A+ +++++ A T F K + Q+ G Sbjct: 232 DSNLIVILNDNKQVSLPTATLDGPATPVGALSSALTKIQASTKFRKLREAAKSITKQIGG 291 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY----RGHSMSD 291 V A +D+ + G + E L Y GHS+ D Sbjct: 292 Q-THQVAAKVDEYARGMISASGSTLFEELGLYYIGPVDGHSIED 334 >gi|170042886|ref|XP_001849140.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167866314|gb|EDS29697.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 1025 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 35/173 (20%), Positives = 75/173 (43%), Gaps = 4/173 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG VYE+ +++ L + ++++ NNQ T + + + Sbjct: 415 MSILLHGDAAFCGQGVVYETMHLSDLPDYTCHGTVHIVVNNQIGFTTDPRHSRSSPYCTD 474 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV A + ++I++++YR GH+ D + Sbjct: 475 VARVVNAPIFHVNSDDPEAVMHVCKVAAEWRSTFHKDVVIDLVSYRRNGHNEIDEPMFTQ 534 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 ++RS ++ +L+ + ++K ++ KI ++E A+S+ Sbjct: 535 PLMYKKVRSIKPVLDIYANQLISEGVVTAEEVKSVKDKYEKICEEAMEQAKSE 587 >gi|162147211|ref|YP_001601672.1| 2-oxoglutarate dehydrogenase E1 component [Gluconacetobacter diazotrophicus PAl 5] gi|161785788|emb|CAP55359.1| 2-oxoglutarate dehydrogenase E1 component [Gluconacetobacter diazotrophicus PAl 5] Length = 956 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 4/126 (3%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 + + RS + ++ GD A A QG VYE+ ++ L I+V+ NNQ T + A Sbjct: 355 DPHARSRHMALLLHGDAAFAGQGLVYETMAMSQLIGYRTGGTIHVVVNNQIGFTTVSAHA 414 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P + V+G + AV A + + I+++++ YR GH+ Sbjct: 415 YSGLYCTDIAKAVQAPILHVNGDEPEAVVYCARLAADFRQKFATDIVLDIVGYRRHGHNE 474 Query: 290 SDPANY 295 SD ++ Sbjct: 475 SDEPSF 480 >gi|161485653|ref|NP_419158.2| alpha-ketoglutarate decarboxylase [Caulobacter crescentus CB15] gi|221233281|ref|YP_002515717.1| 2-oxoglutarate dehydrogenase E1 component [Caulobacter crescentus NA1000] gi|220962453|gb|ACL93809.1| 2-oxoglutarate dehydrogenase E1 component [Caulobacter crescentus NA1000] Length = 987 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 13/162 (8%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L I+ I NNQ TS + + Sbjct: 386 RGHVLPLLLHGDAAFAGQGVVAECFTLSGLKGYRTGGTIHFIVNNQIGFTTSPRYSRSSP 445 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------ 287 S + P V+G D AV + Y + ++I+M+ YR GH Sbjct: 446 YPSDMALMVEAPIFHVNGDDPEAVVFAAKVSTEYRQKFGKDVVIDMVCYRRFGHNEGDDP 505 Query: 288 SMSDPANY---RTREEINEMRSNHDPIEQVRKRLLHNKWASE 326 +M+ P Y + E+ SN E V + + W SE Sbjct: 506 TMTSPLMYAKIKGHPSTRELYSNRLIGEGVITQADCDSWVSE 547 >gi|303230494|ref|ZP_07317253.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Veillonella atypica ACS-049-V-Sch6] gi|302514860|gb|EFL56843.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Veillonella atypica ACS-049-V-Sch6] Length = 584 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 16/182 (8%) Query: 129 LTGRQGGI-SKGKGGSMHMFS-----TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR G +K K ++ +S T + F+ GH +SL G+ + Sbjct: 80 LTGRYEGFKNKNKFHTVSGYSNPDESTYDAFHLGHA--STSLSLACGLMIGRDLQHKTHP 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT------SVSRASAQTNFS 236 + GDGA + G+ YE+ N A + + +I +N ++ S + +TN Sbjct: 138 IITLIGDGALSGGEAYEALNHLATMSSQCLIIINDNDQSIAENHGGLYSHLQQLRETNGE 197 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH--SMSDPAN 294 F G +D T+ KA+ C+ PI++ + T + G+ ++++P + Sbjct: 198 SPNNIFKALGFSYRYVDDGNSLPTVIKALKECKTETTPIVLHIHTTKGYGYNKAITNPES 257 Query: 295 YR 296 + Sbjct: 258 FH 259 >gi|297288378|ref|XP_002803331.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Macaca mulatta] Length = 873 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 5/114 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 256 ILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVA 315 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 316 RVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEP 369 >gi|153870197|ref|ZP_01999646.1| 2-oxoglutarate dehydrogenase, E1 component [Beggiatoa sp. PS] gi|152073338|gb|EDN70355.1| 2-oxoglutarate dehydrogenase, E1 component [Beggiatoa sp. PS] Length = 841 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR DK + V+ GD A A QG + E+ N++ + I++I NNQ Sbjct: 241 GAVRARQERREDKQRHQVLPVLIHGDAAFAGQGVIMETLNLSETRGYSTGGTIHIIINNQ 300 Query: 220 YAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S S T V P V+G D AV A+ Y A ++++ Sbjct: 301 IGFTASDPIDSRSTLHCTDVVKMVQAPIFHVNGDDPEAVLFVTKLALNYRMAFNKDVVVD 360 Query: 279 MLTYRYRGHSMSD 291 ++ YR +GH+ +D Sbjct: 361 IVCYRRQGHNEAD 373 >gi|86356559|ref|YP_468451.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium etli CFN 42] gi|118595609|sp|Q2KBR2|DXS_RHIEC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|86280661|gb|ABC89724.1| 1-deoxy-D-xylulose-5-phosphate synthase protein [Rhizobium etli CFN 42] Length = 638 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 34/68 (50%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A ++D+ + GDGA + G YE+ N A + +I ++ +N ++ Sbjct: 126 ISAGLGMAIAADLEKTDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIA 185 Query: 224 TSVSRASA 231 SA Sbjct: 186 PPTGAMSA 193 >gi|295401320|ref|ZP_06811292.1| 2-oxoglutarate dehydrogenase, E1 subunit [Geobacillus thermoglucosidasius C56-YS93] gi|294976727|gb|EFG52333.1| 2-oxoglutarate dehydrogenase, E1 subunit [Geobacillus thermoglucosidasius C56-YS93] Length = 952 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 8/176 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 ++ GD A QG V E+ N++ L I++I NN T + + S Sbjct: 364 FAIMIHGDAAFPGQGIVAETLNLSRLRGYQTGGSIHIIANNMIGFTTESYDSRSTRYASD 423 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 F IP + V+ D A A + A Y + K +I+++ YR GH+ M +P Sbjct: 424 IAKGFEIPIVHVNADDPEACLAAANLAFKYRQRFKKDFVIDLIGYRRFGHNEMDEPMA-- 481 Query: 297 TREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 T + + H + Q+ ++L+ ++ ++E+E V + + N+ E D+ Sbjct: 482 TNPTMYNVIQQHPTVRQLYAQKLVEKGVIAKEAVEEMEREVAERLKNAYERVPKDE 537 >gi|260892373|ref|YP_003238470.1| Transketolase domain protein [Ammonifex degensii KC4] gi|260864514|gb|ACX51620.1| Transketolase domain protein [Ammonifex degensii KC4] Length = 273 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A A + D V GDG +GQV+E+ AA + L N+I ++ Sbjct: 119 GSLGQGLSVGVGMALAARLDGRDYRVYVLLGDGECQEGQVWEAAMAAAHYRLDNLIAFLD 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + V+ +++ +F ++DG + A + AVA + KG P Sbjct: 179 YNGLQIDGPVAEVMNLEPLAEKWRAFGWHVQEIDGHNF----AEILDAVARAQEVKGKPN 234 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 235 MIIARTVKGKGVSF 248 >gi|91090692|ref|XP_974704.1| PREDICTED: similar to 2-oxoglutarate dehydrogenase [Tribolium castaneum] gi|270013943|gb|EFA10391.1| hypothetical protein TcasGA2_TC012622 [Tribolium castaneum] Length = 990 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 77/175 (44%), Gaps = 6/175 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A + QG YES+ ++ L + I I NNQ T + + S Sbjct: 380 LAILIHGDAAFSGQGVNYESYGLSYLPHYTTHGAICFIINNQVGFTTDPRFSRSSRYCSD 439 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 G N P V+ D +V + A + III+++ YR GH+ +D + Sbjct: 440 LGKVVNAPIFHVNADDPESVIHVCNIAAEWRAKFHKDIIIDLVGYRRHGHNEADEPMFTQ 499 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 +++S ++ LL K ++ ++K ++ + K+ + E+ ++ K+ Sbjct: 500 PLMYTKIKSMASIGDKYSSELLKEKVVTKDEIKHVKDDYNKLCED--EYVKASKQ 552 >gi|88801643|ref|ZP_01117171.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaribacter irgensii 23-P] gi|88782301|gb|EAR13478.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaribacter irgensii 23-P] Length = 588 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 28/202 (13%) Query: 100 TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 T D ++ ++ +GH + G K + R GIS G S + F GH Sbjct: 63 TPNDLLVWDVGHQAYGHKILTG---RKTVFHTNRRLNGIS---GFPSRKESPYDTFGVGH 116 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 +LG IA +N ++K + GD + G +E+ N A + N N++ ++ + Sbjct: 117 SSTSISAALGMAIA-SNLKGNTEKQHIAVIGDASLASGMAFEALNHAGVSNANLLIILND 175 Query: 218 NQYAMGTSVS-------------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + SV + +AQ N K ++F+ G +DG ++ + A + Sbjct: 176 NAIGIDPSVGALKEYLTRVKTDRKLAAQNNIIK-ALNFDYSG-PIDGHNLPKLLAEL--- 230 Query: 265 VAYCRAHKGPIIIEMLTYRYRG 286 A + KGP + ++T + +G Sbjct: 231 -ARLKGVKGPKFLHVITTKGKG 251 >gi|256419423|ref|YP_003120076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chitinophaga pinensis DSM 2588] gi|256034331|gb|ACU57875.1| deoxyxylulose-5-phosphate synthase [Chitinophaga pinensis DSM 2588] Length = 641 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 156 GHGIVGAQVSLGTGIAFANKYR-RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G +S G+A A+KY+ +D+ + GDGA G +E+ N A + N NV+ + Sbjct: 117 GVGHSSTSISAALGMAMASKYKGETDRQHIAVIGDGAMTAGMAFEALNHAGVANANVLII 176 Query: 215 IENNQYAMGTSV 226 + +N ++ +V Sbjct: 177 LNDNCMSIDPNV 188 >gi|86609432|ref|YP_478194.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)] gi|118595624|sp|Q2JK64|DXS_SYNJB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|86557974|gb|ABD02931.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 648 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 34/265 (12%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-- 100 +++ N+ + L+ +L L R+ +K Q VG CHL G V + + + T Sbjct: 5 DITHPNQLRNLNLSQLRSLARQIRDKHLQTAANSPVG--CHLGPGLGVVELTLALYKTLD 62 Query: 101 -EGDQMI--TAYREHGHILACGVDASKIMAELTGRQ-GGISKGKGGSMHMFSTKNGFYGG 156 + D++I ++ + H + G + T RQ GGIS S F + F G Sbjct: 63 LDRDKVIWDVGHQAYAHKMLTG----RYHNFHTLRQKGGISGYLKRSESRF---DHFGAG 115 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAA-LWNLNVIYV 214 H +LG IA + RR D VV GDGA G YE+ N A L N++ V Sbjct: 116 HASTSISAALGMAIA---RDRRGDNFKVVAIIGDGALTGGMAYEAINHAGHLPKTNLMVV 172 Query: 215 IENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDG----MDIRAVKATM 261 + +N ++ +V R S F + + + + G +I +K T+ Sbjct: 173 LNDNGMSISPNVGAIPRYLNRLRLSPPVQFLADSLEEQLKNLPLLGSSLSPEIDRLKETV 232 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRG 286 K V + +K II E L + Y G Sbjct: 233 -KLVTAVQNNKAGIIFEELGFTYVG 256 >gi|58698261|ref|ZP_00373180.1| 2-oxoglutarate dehydrogenase, E1 component [Wolbachia endosymbiont of Drosophila ananassae] gi|58535233|gb|EAL59313.1| 2-oxoglutarate dehydrogenase, E1 component [Wolbachia endosymbiont of Drosophila ananassae] Length = 864 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 36/163 (22%), Positives = 77/163 (47%), Gaps = 8/163 (4%) Query: 188 GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 GD A QG V E+ ++ + V ++++ NNQ +G + S + A+++F ++ + Sbjct: 280 GDAAFIGQGVVAETLTLSNIEGYRVDGIVHIVINNQ--VGFTASPSCARSSFYCTDIAKS 337 Query: 244 I--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEI 301 I P V+G + AV + A+ Y + K ++I+++ YR GH+ D N+ Sbjct: 338 IEAPVFHVNGDNPEAVSFVANLAMEYRQKFKKDVVIDIMCYRKYGHNEGDEPNFTQPLMY 397 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 + + P ++L K + ++ ++ R ++ S+ Sbjct: 398 KAISKHKTPGTLYEEKLTAEKVLDDDEVNKLRSEFRAKLDKSL 440 >gi|154251907|ref|YP_001412731.1| 2-oxoglutarate dehydrogenase E1 component [Parvibaculum lavamentivorans DS-1] gi|154155857|gb|ABS63074.1| 2-oxoglutarate dehydrogenase, E1 subunit [Parvibaculum lavamentivorans DS-1] Length = 1083 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 67/168 (39%), Gaps = 16/168 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY---RRSDKICVVCFGDGA-ANQGQ 196 G +H+ T N H + V LG A +++ +R I ++ GD A A QG Sbjct: 444 GNKVHLSLTANP---SHLEIVDPVVLGKARAKQDQHHDRQRGSVIPLLIHGDAAFAGQGI 500 Query: 197 VYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 V E ++ L I+ I NNQ TS + + S P V+G D Sbjct: 501 VAECLGLSDLKGHRTGGSIHFIINNQIGFTTSPINSRSSPYPSDVAKMVQAPIFHVNGDD 560 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSDPANY 295 AV A + + P++I+M YR GH SM+ P Y Sbjct: 561 PEAVVHAAKIATEFRQRFNKPVVIDMFCYRRFGHNEGDDPSMTQPLMY 608 >gi|160875740|ref|YP_001555056.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella baltica OS195] gi|160861262|gb|ABX49796.1| 2-oxoglutarate dehydrogenase, E1 subunit [Shewanella baltica OS195] gi|315267929|gb|ADT94782.1| 2-oxoglutarate dehydrogenase, E1 subunit [Shewanella baltica OS678] Length = 943 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 5/113 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKR 238 + GD A A QG V E+FN++ V I ++ NNQ TS + T + + Sbjct: 359 ITIHGDSAIAGQGIVQETFNMSQTRGFTVGGSIRIVVNNQVGFTTSNHADTRSTEYCTDI 418 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV AV Y K +++E++ YR GH+ +D Sbjct: 419 AKMVQAPIFHVNSDDPEAVAFVSQLAVDYRNEFKRDVVVELVCYRRHGHNEAD 471 >gi|13421488|gb|AAK22326.1| 2-oxoglutarate dehydrogenase, E1 component [Caulobacter crescentus CB15] Length = 976 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 13/162 (8%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L I+ I NNQ TS + + Sbjct: 375 RGHVLPLLLHGDAAFAGQGVVAECFTLSGLKGYRTGGTIHFIVNNQIGFTTSPRYSRSSP 434 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------ 287 S + P V+G D AV + Y + ++I+M+ YR GH Sbjct: 435 YPSDMALMVEAPIFHVNGDDPEAVVFAAKVSTEYRQKFGKDVVIDMVCYRRFGHNEGDDP 494 Query: 288 SMSDPANY---RTREEINEMRSNHDPIEQVRKRLLHNKWASE 326 +M+ P Y + E+ SN E V + + W SE Sbjct: 495 TMTSPLMYAKIKGHPSTRELYSNRLIGEGVITQADCDSWVSE 536 >gi|319956054|ref|YP_004167317.1| 1-deoxy-d-xylulose-5-phosphate synthase [Nitratifractor salsuginis DSM 16511] gi|319418458|gb|ADV45568.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratifractor salsuginis DSM 16511] Length = 627 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 13/156 (8%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGH-ILACGVDASKIMAELTGRQG 134 GG +G +I+GM + D I +++ + H +L DA + + G Sbjct: 30 GGHLSSTLGAVDLIIGMHYVFDAQKDPFIFDVSHQAYAHKLLTDRWDAFDTLRQF----G 85 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 GIS G + S + + GH +SL G A A + + D+I VV GDG+ + Sbjct: 86 GIS---GYTNPEESPYDYYKAGHS--STSISLAVGAAKAIRLKGEDRIPVVMIGDGSMSA 140 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 G VYE+ N V+ ++ +N+ ++ + S Sbjct: 141 GMVYEALNELGDRKYPVVIILNDNEMSIAKPIGAIS 176 >gi|126174728|ref|YP_001050877.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella baltica OS155] gi|153001027|ref|YP_001366708.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella baltica OS185] gi|217973013|ref|YP_002357764.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella baltica OS223] gi|304409105|ref|ZP_07390726.1| 2-oxoglutarate dehydrogenase, E1 subunit [Shewanella baltica OS183] gi|307303108|ref|ZP_07582863.1| 2-oxoglutarate dehydrogenase, E1 subunit [Shewanella baltica BA175] gi|125997933|gb|ABN62008.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella baltica OS155] gi|151365645|gb|ABS08645.1| 2-oxoglutarate dehydrogenase, E1 subunit [Shewanella baltica OS185] gi|217498148|gb|ACK46341.1| 2-oxoglutarate dehydrogenase, E1 subunit [Shewanella baltica OS223] gi|304352926|gb|EFM17323.1| 2-oxoglutarate dehydrogenase, E1 subunit [Shewanella baltica OS183] gi|306913468|gb|EFN43890.1| 2-oxoglutarate dehydrogenase, E1 subunit [Shewanella baltica BA175] Length = 943 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 5/113 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKR 238 + GD A A QG V E+FN++ V I ++ NNQ TS + T + + Sbjct: 359 ITIHGDSAIAGQGIVQETFNMSQTRGFTVGGSIRIVVNNQVGFTTSNHADTRSTEYCTDI 418 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV AV Y K +++E++ YR GH+ +D Sbjct: 419 AKMVQAPIFHVNSDDPEAVAFVSQLAVDYRNEFKRDVVVELVCYRRHGHNEAD 471 >gi|237725222|ref|ZP_04555703.1| transketolase, N-terminal subunit [Bacteroides sp. D4] gi|229436488|gb|EEO46565.1| transketolase, N-terminal subunit [Bacteroides dorei 5_1_36/D4] Length = 281 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A A K +D V GDG +G +YE+ + L N++ +I+ Sbjct: 114 GALGHGLSIGVGMALAAKMDEADYKTYVLMGDGEQGEGSIYEAAMAGNQYKLDNLVAIID 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N+ + + + + R +F ++++G ++ + Sbjct: 174 RNRLQISGTTEEVMSLESMRDRWTAFGWDVLEMNGDEMEDI 214 >gi|260589053|ref|ZP_05854966.1| transketolase [Blautia hansenii DSM 20583] gi|331083241|ref|ZP_08332354.1| hypothetical protein HMPREF0992_01278 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540832|gb|EEX21401.1| transketolase [Blautia hansenii DSM 20583] gi|330404322|gb|EGG83867.1| hypothetical protein HMPREF0992_01278 [Lachnospiraceae bacterium 6_1_63FAA] Length = 279 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 2/109 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K GDG +GQV+E+ +A L N+ +++ Sbjct: 115 GSLGQGISAAVGMALSAKLSGESYRVYTLLGDGEIQEGQVWEAAMLAGHRKLDNLTVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKA 264 NN + ++ + K+ +FN + V DG D +KA D+A Sbjct: 175 NNGLQIDGNIEDVCSPYPIDKKFEAFNFHVINVEDGNDFDQLKAAFDEA 223 >gi|3219721|gb|AAC23516.1| alpha-ketoglutarate dehydrogenase [Pseudomonas putida] Length = 943 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 10/136 (7%) Query: 169 GIAFANKYRRSDKI-----CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ ++++ NNQ Sbjct: 338 GSVRARQDRRNDTVGDKVLPISIHGDKAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 S + T ++ P + V+G D AV + Y K ++I+ Sbjct: 398 VGFTISNPLDARSTEYATDVAKMIQAPILHVNGDDPEAVLFVTQLRIDYRMQFKRDVVID 457 Query: 279 MLTYRYRGHSMSDPAN 294 ++ YR RGH+ +D N Sbjct: 458 LVCYRRRGHNEADEPN 473 >gi|163802536|ref|ZP_02196428.1| alpha-ketoglutarate decarboxylase [Vibrio sp. AND4] gi|159173619|gb|EDP58438.1| alpha-ketoglutarate decarboxylase [Vibrio sp. AND4] Length = 941 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+FN++ V + ++ NNQ TS R + T + + Sbjct: 353 LPITIHGDSAIAGQGVVAETFNMSLARGFCVGGTVRIVINNQVGFTTSNPRDTRSTMYCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+ D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 413 DIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|325963866|ref|YP_004241772.1| 2-oxoglutarate dehydrogenase E1 component [Arthrobacter phenanthrenivorans Sphe3] gi|323469953|gb|ADX73638.1| 2-oxoglutarate dehydrogenase E1 component [Arthrobacter phenanthrenivorans Sphe3] Length = 1283 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 10/134 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N++ L I+++ NNQ T+ S + + T + Sbjct: 693 LPIMVHGDAAFAGQGVVAETLNLSQLRGYRTGGTIHIVVNNQVGFTTAPSSSRSSTYSTD 752 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D AV A + + ++I+M+ YR RGH SM+ Sbjct: 753 VAKMIQAPVFHVNGDDPEAVVRIGQLAYEFRQRFHKDVVIDMVCYRRRGHNEGDDPSMTQ 812 Query: 292 PANYRTREEINEMR 305 P Y E +R Sbjct: 813 PLMYNLIEAKRSVR 826 >gi|307267531|ref|ZP_07549011.1| Transketolase domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306917444|gb|EFN47738.1| Transketolase domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 273 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + GDG +GQ++E+ AA + L N+ +++ Sbjct: 115 GSLGQGLSAANGMALAGKLDKKGYRVYAILGDGELQEGQIWEAAMTAAHYKLDNLTAILD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + +++ +F +++DG D + DKA+ +A KG P Sbjct: 175 FNGLQIDGPNREVKNIEPVNEKFKAFGWHVIEIDGHDFEQI----DKAIEEAKATKGKPT 230 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 231 LIIAHTIKGKGVSF 244 >gi|206896371|ref|YP_002247124.1| 1-deoxy-D-xylulose-5-phosphate synthase [Coprothermobacter proteolyticus DSM 5265] gi|206738988|gb|ACI18066.1| 1-deoxy-D-xylulose-5-phosphate synthase [Coprothermobacter proteolyticus DSM 5265] Length = 629 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 2/84 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 ST + +Y GH G +SL G A A K + +V GDGA G YE N Sbjct: 102 STYDKYYAGHA--GTGLSLAYGEAMARKLKGVPGRVLVVVGDGALTNGISYEGLNNIGAS 159 Query: 208 NLNVIYVIENNQYAMGTSVSRASA 231 L ++ ++ +N++++ +V +A Sbjct: 160 GLPIVIILNDNEHSISKNVGAMAA 183 >gi|161829944|ref|YP_001596608.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha/beta fusion protein [Coxiella burnetii RSA 331] gi|165918458|ref|ZP_02218544.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha/beta fusion protein [Coxiella burnetii RSA 334] gi|14600142|gb|AAK71265.1|AF387640_11 TPP-dependent acetoin dehydrogenase subunit a/b fusion protein [Coxiella burnetii] gi|161761811|gb|ABX77453.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha/beta fusion protein [Coxiella burnetii RSA 331] gi|165917826|gb|EDR36430.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha/beta fusion protein [Coxiella burnetii RSA 334] Length = 235 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L D ++++R H H A G ++AEL G+ G++ G GGSM++ GF Sbjct: 6 LNTTDLAVSSHRAHAHYSAKGDSLKALIAELYGKVTGVTAGCGGSMNLSDLSIGFVANTA 65 Query: 159 IVGAQ 163 IV + Sbjct: 66 IVAEE 70 >gi|298206764|ref|YP_003714943.1| transketolase, N-terminal subunit [Croceibacter atlanticus HTCC2559] gi|83849395|gb|EAP87263.1| transketolase, N-terminal subunit [Croceibacter atlanticus HTCC2559] Length = 293 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 3/126 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G A + K DK+ GDG +GQ +E+F AA + N+I I+ Sbjct: 130 GSLGQGLSVAIGAASSKKLNGDDKLVYALLGDGELQEGQNWEAFMYAAGNGIDNLIATID 189 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPI 275 N + S + N ++ V+F +++ DG +I+ V + A + K P+ Sbjct: 190 LNGQQIDGSTDKVLPLGNLKEKFVAFGWDVLEIKDGNNIKEVIDGLKLAKSKTGNGK-PV 248 Query: 276 IIEMLT 281 +I M T Sbjct: 249 LILMHT 254 >gi|219870874|ref|YP_002475249.1| 2-oxoglutarate dehydrogenase E1 component [Haemophilus parasuis SH0165] gi|219691078|gb|ACL32301.1| alpha-ketoglutarate decarboxylase [Haemophilus parasuis SH0165] Length = 935 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+ N++ V I ++ NNQ TS + T + + Sbjct: 353 LAITVHGDSAVAGQGVVQETLNMSNARGYKVGGTIRIVINNQIGFTTSNPNDTRSTEYCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P + V+G D AV AV Y K I I++++YR GH+ +D Sbjct: 413 DIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRCLFKRDIFIDLISYRRHGHNEAD 467 >gi|215919018|ref|NP_819716.2| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha/beta fusion protein [Coxiella burnetii RSA 493] gi|206583903|gb|AAO90230.2| pyruvate dehydrogenase E1 component beta subunit [Coxiella burnetii RSA 493] Length = 236 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L D ++++R H H A G ++AEL G+ G++ G GGSM++ GF Sbjct: 7 LNTTDLAVSSHRAHAHYSAKGDSLKALIAELYGKVTGVTAGCGGSMNLSDLSIGFVANTA 66 Query: 159 IVGAQ 163 IV + Sbjct: 67 IVAEE 71 >gi|167856185|ref|ZP_02478923.1| alpha-ketoglutarate decarboxylase [Haemophilus parasuis 29755] gi|167852707|gb|EDS23983.1| alpha-ketoglutarate decarboxylase [Haemophilus parasuis 29755] Length = 935 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+ N++ V I ++ NNQ TS + T + + Sbjct: 353 LAITVHGDSAVAGQGVVQETLNMSNARGYKVGGTIRIVINNQIGFTTSNPNDTRSTEYCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P + V+G D AV AV Y K I I++++YR GH+ +D Sbjct: 413 DIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRCLFKRDIFIDLISYRRHGHNEAD 467 >gi|163744281|ref|ZP_02151641.1| alpha-ketoglutarate decarboxylase [Oceanibulbus indolifex HEL-45] gi|161381099|gb|EDQ05508.1| alpha-ketoglutarate decarboxylase [Oceanibulbus indolifex HEL-45] Length = 986 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 78/188 (41%), Gaps = 5/188 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R+ + ++ GD A A QG V E F ++ L ++++ NNQ T+ + Sbjct: 379 NDKDRTAVMPILLHGDAAFAGQGVVAECFALSGLKGHKTGGTMHIVVNNQIGFTTAPHFS 438 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D AV A + + ++I++ YR GH+ Sbjct: 439 RSSPYPTDNALVVEAPIFHVNGDDPEAVVHAARVATEFRQKFHKDVVIDLFCYRRFGHNE 498 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + ++ + +RL+ + EG++++++ + + E A Sbjct: 499 GDEPMFTNPVMYKSVKKQKTTLSLYTQRLVADGLIPEGEIEDMKTAFQNHLGAEFE-AGK 557 Query: 350 DKEPDPAE 357 D P+ A+ Sbjct: 558 DYRPNKAD 565 >gi|312111862|ref|YP_003990178.1| 2-oxoglutarate dehydrogenase, E1 subunit [Geobacillus sp. Y4.1MC1] gi|311216963|gb|ADP75567.1| 2-oxoglutarate dehydrogenase, E1 subunit [Geobacillus sp. Y4.1MC1] Length = 952 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 8/176 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 ++ GD A QG V E+ N++ L I++I NN T + + S Sbjct: 364 FAIMIHGDAAFPGQGIVAETLNLSRLRGYQTGGSIHIIANNMIGFTTESYDSRSTRYASD 423 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 F IP + V+ D A A + A Y + K +I+++ YR GH+ M +P Sbjct: 424 IAKGFEIPIVHVNADDPEACLAAANLAFKYRQRFKKDFVIDLIGYRRFGHNEMDEPMA-- 481 Query: 297 TREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 T + + H + Q+ ++L+ ++ ++E+E V + + N+ E D+ Sbjct: 482 TNPTMYNVIQQHPTVRQLYAQKLVEKGVIAKEAVEEMEREVAERLKNAYERVPKDE 537 >gi|300362329|ref|ZP_07058505.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus gasseri JV-V03] gi|300353320|gb|EFJ69192.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus gasseri JV-V03] Length = 602 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 23/153 (15%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G V+L TG+A A + GDG+ G +E FN AA N+I Sbjct: 131 YYAVGHTSTSVALATGMARARDMMGKHENITALIGDGSLTGGLAFEGFNNAADEKHNLII 190 Query: 214 VIENNQYAMGTSV------------SRASAQTN-FSKRGVSFNIPGMQVDGMDIRAVKAT 260 V+ +NQ ++ +V S A+ N F+ G+ + G G DI+ + Sbjct: 191 VVNDNQMSIDNNVGGVVTALKKLRESNGQAEDNPFTAMGLDYKYVGQ---GNDIK----S 243 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 M A + PI++ + T + +G+ DPA Sbjct: 244 MIDAFKAVKDIDHPIVLHINTLKGKGY---DPA 273 >gi|298251912|ref|ZP_06975715.1| 2-oxoglutarate dehydrogenase, E1 subunit [Ktedonobacter racemifer DSM 44963] gi|297546504|gb|EFH80372.1| 2-oxoglutarate dehydrogenase, E1 subunit [Ktedonobacter racemifer DSM 44963] Length = 944 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 8/157 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAAL---WNLNVIYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A +G V E+ N+ L W I++I NNQ T +S T+F S Sbjct: 348 LAIQIHGDAAFPGEGVVSETLNMWHLRGYWVGGSIHLIVNNQLGFTTDPD-SSRSTHFAS 406 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAY-CRAHKGPIIIEMLTYRYRGHSMSDPANY 295 F IP + V+ D A + A AY R HK ++++++ YR GH+ D + Sbjct: 407 DVAKGFGIPIIHVNADDPYACLTAVRIAHAYRDRFHKD-VLVDLVGYRRWGHNEGDEPAF 465 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 + +RS+ E +RL+ + ++ + ++I Sbjct: 466 TQPQMYEIIRSHPTARELFAQRLVERQILTQDEAQQI 502 >gi|23014366|ref|ZP_00054186.1| COG0567: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Magnetospirillum magnetotacticum MS-1] Length = 989 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 5/115 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG V E ++ L +++I NNQ T+ + + S Sbjct: 379 IILHGDAAFAGQGVVPEVMLLSQLKGYATGGTVHIIINNQIGFTTAPQYSRSGPYSSDVA 438 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 F P V+G D AV A Y + ++I+M+ YR GH+ SD PA Sbjct: 439 KGFQAPVFHVNGDDPEAVVHVARIATEYRQEFGADVVIDMVCYRRHGHNESDEPA 493 >gi|237738554|ref|ZP_04569035.1| transketolase subunit A [Fusobacterium sp. 2_1_31] gi|229424203|gb|EEO39250.1| transketolase subunit A [Fusobacterium sp. 2_1_31] Length = 275 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 21/189 (11%) Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH-------GIVGAQVSLG 167 +L+ G A I A L R G SK + ++ F ++ GH GI + SLG Sbjct: 69 VLSKGHAAPAIYATLAER-GYFSKDELLTLRKFGSR---LQGHPDMKKLPGIEISTGSLG 124 Query: 168 TGIAFANKYRRSDKI------CVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQY 220 G++ AN + KI + GDG +GQ++E+ AA + L N+ +++N Sbjct: 125 QGLSVANGMALNAKIFNENYRTYIVLGDGEVQEGQIWEAAMTAAHYKLDNLCAFLDSNNL 184 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 + +V+ K+ +F +++DG + + + ++KA C+ P +I Sbjct: 185 QIDGNVTEIMGVEPLDKKWEAFGWNVIKIDGHNFEEILSALEKA-KECKDK--PTMILAK 241 Query: 281 TYRYRGHSM 289 T + +G S Sbjct: 242 TIKGKGVSF 250 >gi|209363866|ref|YP_001424100.2| pyruvate dehydrogenase E1 component beta subunit [Coxiella burnetii Dugway 5J108-111] gi|207081799|gb|ABS76922.2| pyruvate dehydrogenase E1 component beta subunit [Coxiella burnetii Dugway 5J108-111] Length = 237 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L D ++++R H H A G ++AEL G+ G++ G GGSM++ GF Sbjct: 7 LNTTDLAVSSHRAHAHYSAKGDSLKALIAELYGKVTGVTAGCGGSMNLSDLSIGFVANTA 66 Query: 159 IVGAQ 163 IV + Sbjct: 67 IVAEE 71 >gi|317056624|ref|YP_004105091.1| deoxyxylulose-5-phosphate synthase [Ruminococcus albus 7] gi|315448893|gb|ADU22457.1| deoxyxylulose-5-phosphate synthase [Ruminococcus albus 7] Length = 616 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISK-GKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ S K G + F S + F GH +S GIA+ANK + Sbjct: 85 LTGRRDKFSTLRKEGGISGFCRPDESEHDAFISGHS--SNSISAALGIAYANKLKGDHHH 142 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + GDGA + G +E N A + N+I ++ N+ ++ +V Sbjct: 143 AIAVLGDGAMSGGLSFEGLNNAGKSDTNIIVILNYNEMSISRNV 186 >gi|238025428|ref|YP_002909660.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia glumae BGR1] gi|237880093|gb|ACR32425.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia glumae BGR1] Length = 883 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 15/138 (10%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQ 219 V +G A+ + + + + VV GD A A QG V E+ N+A ++VI NNQ Sbjct: 266 VVVGMARAYQDAHGAAACLPVVVHGDAAFAGQGVVTETLNLARNAGYSPAGTLHVIVNNQ 325 Query: 220 YAMGTSVSR--ASAQTNFSKRGVSFNIPGMQV--DGMD--IRAVKATMDKAVAYCRAHKG 273 T+ +R A A T + S + P ++V D D +RAV D Y A Sbjct: 326 IGF-TTPNRMNAEAHTYCTDVARSVDAPVLRVNADRPDEVLRAVAIAFD----YRTAFHA 380 Query: 274 PIIIEMLTYRYRGHSMSD 291 I+I+++ YR GHS D Sbjct: 381 DIVIDLIGYRRLGHSEHD 398 >gi|195112494|ref|XP_002000807.1| GI22321 [Drosophila mojavensis] gi|193917401|gb|EDW16268.1| GI22321 [Drosophila mojavensis] Length = 924 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG E N+A + + V +++I NNQ T R + S Sbjct: 331 LNVILHGDAAFAGQGINQECLNMAYVPHFEVGGSLHLIVNNQVGFTTPGERGRSTEYTSD 390 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 + P V+G D A+ + A Y R + + I++ YR GH+ + DP Sbjct: 391 LAKTIQAPVFHVNGDDPEALIRITNLAFRYQREFRKDVFIDLNCYRRWGHNELDDP 446 >gi|302339482|ref|YP_003804688.1| transketolase [Spirochaeta smaragdinae DSM 11293] gi|301636667|gb|ADK82094.1| Transketolase domain protein [Spirochaeta smaragdinae DSM 11293] Length = 280 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 6/131 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S GIA K R+ + + GDG + +GQV+E+ AA ++L N+I + Sbjct: 119 GSLGQGSSAAVGIALGQKLRKQESRTFLILGDGESQEGQVWEAAMFAAHYHLDNLIAFTD 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N+ + + + + + F +VDG ++ +++AV KG P Sbjct: 179 YNKQQLDGMTGDIMSIDDITTKYNGFGWHVQRVDGHCFPSINRAIERAV----EEKGRPH 234 Query: 276 IIEMLTYRYRG 286 +I + T + +G Sbjct: 235 MIVLDTLKSKG 245 >gi|298294378|ref|YP_003696317.1| deoxyxylulose-5-phosphate synthase [Starkeya novella DSM 506] gi|296930889|gb|ADH91698.1| deoxyxylulose-5-phosphate synthase [Starkeya novella DSM 506] Length = 640 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +GG + F+ + + F GH +S G G+A A + + Sbjct: 86 LTGRRERIRTLRQGGGLSGFTNRAESEYDPFGAGHS--STSISAGLGMAVARDLAGAQRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 V GDGA + G YE+ N A + +I ++ +N ++ V SA Sbjct: 144 VVCVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAPPVGAMSA 192 >gi|255575114|ref|XP_002528462.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] gi|223532138|gb|EEF33945.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis] Length = 529 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/131 (19%), Positives = 57/131 (43%) Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 I+++ NNQ A T + + ++ N P V+G D+ AV + A + + Sbjct: 15 TIHIVVNNQVAFTTDPRSGRSSRYCTDVALALNAPIFHVNGDDMEAVAHVCELAAEWRQT 74 Query: 271 HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 ++++++ YR GH+ D ++ + ++ + ++ + L + +E Sbjct: 75 FHSDVVVDIICYRRFGHNKVDEPSFTQPKMYKVIQKHPSSLKIYENKFLESGEVTEEVTD 134 Query: 331 EIEMNVRKIIN 341 I V +I+N Sbjct: 135 RIHRKVNRILN 145 >gi|166007201|pdb|2V3W|A Chain A, Crystal Structure Of The Benzoylformate Decarboxylase Variant L461a From Pseudomonas Putida gi|166007202|pdb|2V3W|B Chain B, Crystal Structure Of The Benzoylformate Decarboxylase Variant L461a From Pseudomonas Putida gi|166007203|pdb|2V3W|C Chain C, Crystal Structure Of The Benzoylformate Decarboxylase Variant L461a From Pseudomonas Putida gi|166007204|pdb|2V3W|D Chain D, Crystal Structure Of The Benzoylformate Decarboxylase Variant L461a From Pseudomonas Putida Length = 528 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 45/160 (28%) Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 ++M + + ++ G +G + G+ A R+ + GDG+AN ++I Sbjct: 387 LNMRNPGSYYFCAAGGLGFALPAAIGVQLAEPERQ----VIAVIGDGSAN-------YSI 435 Query: 204 AALW-----NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA-- 256 +ALW N+ I+VI NN GT A F+ + N+PG+ V G+D RA Sbjct: 436 SALWTAAQYNIPTIFVIMNN----GTY----GAARWFAGVLEAENVPGLDVPGIDFRALA 487 Query: 257 ---------------VKATMDKAVAYCRAHKGPIIIEMLT 281 +K ++ +A+ + KGP++IE+ T Sbjct: 488 KGYGVQALKADNLEQLKGSLQEAL----SAKGPVLIEVST 523 >gi|153207700|ref|ZP_01946347.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Coxiella burnetii 'MSU Goat Q177'] gi|165918972|ref|ZP_02219058.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Coxiella burnetii RSA 334] gi|212218996|ref|YP_002305783.1| 2-oxoglutarate dehydrogenase E1 component [Coxiella burnetii CbuK_Q154] gi|120576396|gb|EAX33020.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Coxiella burnetii 'MSU Goat Q177'] gi|165917297|gb|EDR35901.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Coxiella burnetii RSA 334] gi|212013258|gb|ACJ20638.1| 2-oxoglutarate dehydrogenase E1 component [Coxiella burnetii CbuK_Q154] Length = 934 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 11/144 (7%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N ++R + V+ GD + + +G V E+ +++ +V I++I NNQ TS Sbjct: 340 NGHKRDYAMTVMIHGDASFSGEGIVMEALSMSQTRAHHVGGSIHIILNNQVGFTTSNPHD 399 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + + + S + P V+G D AV A A+ Y A + I+++ YR GH Sbjct: 400 ARSSMYCSDIAKMLDAPVFHVNGDDPEAVVAVTQLALDYRMAFHKDVFIDLVCYRRHGHQ 459 Query: 289 MSD------PANYRTREEINEMRS 306 D PA Y+ +E R+ Sbjct: 460 EVDDPMPTQPAMYKVIQEHPTTRT 483 >gi|58697315|ref|ZP_00372672.1| 2-oxoglutarate dehydrogenase, E1 component [Wolbachia endosymbiont of Drosophila simulans] gi|58536314|gb|EAL59810.1| 2-oxoglutarate dehydrogenase, E1 component [Wolbachia endosymbiont of Drosophila simulans] Length = 517 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 36/163 (22%), Positives = 77/163 (47%), Gaps = 8/163 (4%) Query: 188 GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 GD A QG V E+ ++ + V ++++ NNQ +G + S + A+++F ++ + Sbjct: 280 GDAAFIGQGVVAETLTLSNIEGYRVDGIVHIVINNQ--VGFTASPSCARSSFYCTDIAKS 337 Query: 244 I--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEI 301 I P V+G + AV + A+ Y + K ++I+++ YR GH+ D N+ Sbjct: 338 IEAPVFHVNGDNPEAVSFVANLAMEYRQKFKKDVVIDIMCYRKYGHNEGDEPNFTQPLMY 397 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 + + P ++L K + ++ ++ R ++ S+ Sbjct: 398 KAISKHKTPGTLYEEKLTAEKVLDDDEVNKLRSEFRAKLDKSL 440 >gi|294782749|ref|ZP_06748075.1| transketolase, N- subunit [Fusobacterium sp. 1_1_41FAA] gi|294481390|gb|EFG29165.1| transketolase, N- subunit [Fusobacterium sp. 1_1_41FAA] Length = 275 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 21/189 (11%) Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH-------GIVGAQVSLG 167 +L+ G A I A L R G SK + ++ F ++ GH GI + SLG Sbjct: 69 VLSKGHAAPAIYATLAER-GYFSKDELLTLRKFGSR---LQGHPDMKKLPGIEISTGSLG 124 Query: 168 TGIAFANKYRRSDKI------CVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQY 220 G++ AN + KI + GDG +GQ++E+ AA + L N+ +++N Sbjct: 125 QGLSVANGMALNAKIFNENYRTYIVLGDGEVQEGQIWEAAMTAAHYKLDNLCAFLDSNNL 184 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 + +V+ K+ +F +++DG + + + ++KA C+ P +I Sbjct: 185 QIDGNVTEIMGVEPLDKKWEAFGWNVIKIDGHNFEEILSALEKA-KECKDK--PTMILAK 241 Query: 281 TYRYRGHSM 289 T + +G S Sbjct: 242 TVKGKGVSF 250 >gi|167758518|ref|ZP_02430645.1| hypothetical protein CLOSCI_00858 [Clostridium scindens ATCC 35704] gi|167663714|gb|EDS07844.1| hypothetical protein CLOSCI_00858 [Clostridium scindens ATCC 35704] Length = 279 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 14/172 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K D GDG +G V+E A+ + L N+ V++ Sbjct: 115 GSLGHGLPVSVGMALAGKMDDRDYRVYTVMGDGELAEGSVWEGAMAASHYKLDNLCAVVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 N+ + A + +R +F + V DG DI +K + A + KG P Sbjct: 175 RNRLQISGRTEDVMAHDDLHERFKAFGWNVIDVEDGNDIDQLKEAFNTA----KTVKGRP 230 Query: 275 IIIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 ++ T + +G S M D AN+ + E + Q+RK L K A+ Sbjct: 231 SVLIANTVKGKGSSVMEDKANWHHKVPSGE------ELAQIRKDLADRKEAA 276 >gi|153207380|ref|ZP_01946117.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha/beta fusion protein [Coxiella burnetii 'MSU Goat Q177'] gi|120576689|gb|EAX33313.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha/beta fusion protein [Coxiella burnetii 'MSU Goat Q177'] Length = 235 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L D ++++R H H A G ++AEL G+ G++ G GGSM++ GF Sbjct: 6 LNTTDLAVSSHRAHAHYSAKGDSLKALIAELYGKVTGVTAGCGGSMNLSDLSIGFVANTA 65 Query: 159 IVGAQ 163 IV + Sbjct: 66 IVAEE 70 >gi|110638293|ref|YP_678502.1| transketolase [Cytophaga hutchinsonii ATCC 33406] gi|110280974|gb|ABG59160.1| transketolase [Cytophaga hutchinsonii ATCC 33406] Length = 280 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 8/128 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G A A K + ++ V GDG +GQV+E+ A L N+I ++ Sbjct: 118 GSLGQGLSVGCGTAQAKKLNKDERFVYVLMGDGEQQEGQVWEAAMYAPHNKLDNLIGFVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--- 273 N + + + + + +F + DG D ++ T+ KA +A+KG Sbjct: 178 YNGQQIDGPCDKVLSLGDLEGKYKAFGWNVITCDGHDFACLEETILKA----QANKGTGI 233 Query: 274 PIIIEMLT 281 P +I M T Sbjct: 234 PTMILMKT 241 >gi|227496544|ref|ZP_03926824.1| transketolase [Actinomyces urogenitalis DSM 15434] gi|226833959|gb|EEH66342.1| transketolase [Actinomyces urogenitalis DSM 15434] Length = 292 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 7/148 (4%) Query: 145 HMFSTK-NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 H TK G G +G + +G G A A K S + V GDG +G +E+ Sbjct: 121 HPARTKVRGVEANTGPLGHGLPIGVGDAIAAKIDGSPRRVFVLTGDGELQEGSNWEALMA 180 Query: 204 AALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 AA + L N++ V + N G + + T ++ +F + VD D + + Sbjct: 181 AAQFKLDNLVVVADRNHLQQGATTEDTNDLTPLDEKARAFGAHVVDVDAHDFDQLLDAFE 240 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A A K +I + ++GH +S Sbjct: 241 --AAPVEAGKPTFVI---AHSHKGHPIS 263 >gi|154707312|ref|YP_001424003.1| 2-oxoglutarate dehydrogenase E1 component [Coxiella burnetii Dugway 5J108-111] gi|154356598|gb|ABS78060.1| 2-oxoglutarate dehydrogenase E1 component [Coxiella burnetii Dugway 5J108-111] Length = 934 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 11/144 (7%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N ++R + V+ GD + + +G V E+ +++ +V I++I NNQ TS Sbjct: 340 NGHKRDYAMTVMIHGDASFSGEGIVMEALSMSQTRAHHVGGSIHIILNNQVGFTTSNPHD 399 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + + + S + P V+G D AV A A+ Y A + I+++ YR GH Sbjct: 400 ARSSMYCSDIAKMLDAPVFHVNGDDPEAVVAVTQLALDYRMAFHKDVFIDLVCYRRHGHQ 459 Query: 289 MSD------PANYRTREEINEMRS 306 D PA Y+ +E R+ Sbjct: 460 EVDDPMPTQPAMYKVIQEHPTTRT 483 >gi|303242267|ref|ZP_07328754.1| Transketolase domain protein [Acetivibrio cellulolyticus CD2] gi|302590177|gb|EFL59938.1| Transketolase domain protein [Acetivibrio cellulolyticus CD2] Length = 280 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +GQV+E+ AA + L N+I ++ Sbjct: 118 GSLGQGISAAVGMAIAGKIDNKDYNVYALLGDGEIQEGQVWEALMAAAHYKLDNLIAFLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N + ++S + ++ +F + ++G D + +++A ++ P + Sbjct: 178 HNHLQIDGNISEVMSPEPVEEKFKAFGWKVIMINGHDHLQIIEAINEA---KKSKDKPTM 234 Query: 277 IEMLTYRYRGHSM 289 I T + +G S Sbjct: 235 IVAETIKGKGVSF 247 >gi|302671549|ref|YP_003831509.1| transketolase subunit A TktA1 [Butyrivibrio proteoclasticus B316] gi|302396022|gb|ADL34927.1| transketolase subunit A TktA1 [Butyrivibrio proteoclasticus B316] Length = 273 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A A K + ++ V GDG N+GQV+E+ + + L NV+ +++ Sbjct: 119 GSLGQGLSIGAGMALALKKKNNNANVYVLLGDGECNEGQVWEAAHTIQHYRLNNVVTIVD 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI-RAVKATMDK------AVAYCR 269 N + S+ +++DG + ++A D+ +A Sbjct: 179 KNGLQFDGRTKDVQDGNRLKENWESYGFDVVEIDGHSFEQLIRALSDRNSIPKVIIANTV 238 Query: 270 AHKGPIIIEMLTYRYRGHSMSDPANYRTREEI 301 KG E T + + ++D ++ ++E+ Sbjct: 239 KGKGISFAENAT-EWHSNFLTDEQYFKAKDEL 269 >gi|257453551|ref|ZP_05618841.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Enhydrobacter aerosaccus SK60] gi|257449009|gb|EEV23962.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Enhydrobacter aerosaccus SK60] Length = 980 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 15/161 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG H+ F H + + V +G+ A + RR DK + +V GD A A Q Sbjct: 322 GGEAHL---ALAFNPSHLEIVSPVLIGS--VRARQVRRQDKTGDAVLPIVVHGDAAFAGQ 376 Query: 195 GQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVD 250 G E+F ++ A +++I NNQ TS + T + + + P V+ Sbjct: 377 GVNQETFQMSQTRAYSTGGTLHIIINNQVGFTTSRLEDARSTEYCTDIAKMVHAPIFHVN 436 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 G D AV A Y + I+I+M YR GH+ +D Sbjct: 437 GDDPEAVVFMAQLAHDYRQTFHKDIVIDMYCYRRNGHNEAD 477 >gi|114566129|ref|YP_753283.1| deoxyxylulose-5-phosphate synthase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318773|sp|Q0AZE2|DXS_SYNWW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|114337064|gb|ABI67912.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 638 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 66/172 (38%), Gaps = 24/172 (13%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G+A A + V GDGA G +E+ N A Sbjct: 107 SEYDAFNTGHS--STSISAALGMALARDLQGQSNSVVAVIGDGALTAGMAFEALNHAGQE 164 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN------------IPGMQVDGMDIR 255 + ++I V+ +N+ ++ +V SA N + S++ IPG+ G ++ Sbjct: 165 DSDLIVVLNDNEMSISKNVGAMSAYLNRLRTDPSYSRTKEEIESVLNRIPGI---GPNLA 221 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSN 307 V Y II E L + Y G P N E+ + SN Sbjct: 222 RAAGKFKDTVKYLMVPG--IIFEELGFTYIG-----PVNGHDLAELKAVLSN 266 >gi|291412826|ref|XP_002722682.1| PREDICTED: transketolase-like 1-like [Oryctolagus cuniculus] Length = 484 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G G + G+A+ +Y V C GDG ++G V+E+ A+ ++L N++ + Sbjct: 88 GWFGQGLGAACGMAYTGRYFDKASYRVFCLLGDGETSEGSVWEAMTFASYYSLDNLVVIF 147 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ G ++ + KR +F VDG D+ A+ +A + P Sbjct: 148 DVNRLGQGGTLPVEDCIEIYQKRCEAFGWNTYVVDGRDVEALCQVFWQAA---QVKGKPT 204 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 205 AVVAKTFKGRG 215 >gi|257487270|ref|ZP_05641311.1| transketolase, N-terminal subunit, putative [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 177 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 7/129 (5%) Query: 156 GHGIVGAQVSLGTGIAFAN----KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G I G + G GIA K + S DG N+G +E+ A+ W L N Sbjct: 11 GMEITGGSLGHGLGIAVGACLGLKRKASRSFVYNLLSDGELNEGSTWEAAMSASHWKLDN 70 Query: 211 VIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 +I +++ NNQ A G S S A R +F +VDG D+ A+ A D A + Sbjct: 71 LIAIVDVNNQQADGHS-SEVLAFEPIVDRWQAFGWFTQRVDGNDLNALVAAFDAARQHVG 129 Query: 270 AHKGPIIIE 278 A II + Sbjct: 130 AQPRVIICD 138 >gi|149377247|ref|ZP_01894994.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter algicola DG893] gi|149358435|gb|EDM46910.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter algicola DG893] Length = 644 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 47/221 (21%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 + ++R T +D +D P + +EL+A +L L R E +A L+ +G GG Sbjct: 10 IPSQRPNTPLLDRIDTP----------GQLRELAAEQLTQLAR--ELRAFLLWSVGQTGG 57 Query: 81 FCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGIS 137 +G + V + T D+++ ++ + H + LTGR+ Sbjct: 58 HFGAGLGVLELTVALHYVFNTPEDRLVWDVGHQAYPHKI------------LTGRRE--- 102 Query: 138 KGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKICVV 185 M+ K+G G G G +S G+A A++ + + + + Sbjct: 103 -----RMNSIRRKDGLAGFPKRAESEYDTFGVGHSSTSISAALGMAIASRMQGTGRKSIA 157 Query: 186 CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GDGA G +E+ N A + N++ ++ +N ++ +V Sbjct: 158 VIGDGAMTAGMAFEALNHAGHLDANMLVILNDNDMSISRNV 198 >gi|74009175|ref|XP_538204.2| PREDICTED: similar to transketolase-like 1 [Canis familiaris] Length = 596 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+ A+ +NL N++ + Sbjct: 94 GWLGQGLGAACGMAYTGKYFDKASYRVFCLMGDGESSEGSVWEALAFASHYNLDNLVAIF 153 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + + KR +F VDG D+ A+ +A P Sbjct: 154 DVNRVGHSGGLPLEHCIDIYQKRCEAFGWNTYVVDGRDVEALCQVFWQA---SEVKNKPT 210 Query: 276 IIEMLTYRYRG-HSMSDPANY 295 + T++ RG S+ D N+ Sbjct: 211 AVVAKTFKGRGIPSVEDAENW 231 >gi|29654692|ref|NP_820384.1| 2-oxoglutarate dehydrogenase E1 component [Coxiella burnetii RSA 493] gi|161831389|ref|YP_001597240.1| 2-oxoglutarate dehydrogenase E1 component [Coxiella burnetii RSA 331] gi|212212232|ref|YP_002303168.1| 2-oxoglutarate dehydrogenase E1 component [Coxiella burnetii CbuG_Q212] gi|30581055|sp|P51056|ODO1_COXBU RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|457725|emb|CAA54874.1| putative 2-oxoglutarate dehydrogenase [Coxiella burnetii] gi|29541960|gb|AAO90898.1| 2-oxoglutarate dehydrogenase E1 component [Coxiella burnetii RSA 493] gi|161763256|gb|ABX78898.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Coxiella burnetii RSA 331] gi|212010642|gb|ACJ18023.1| 2-oxoglutarate dehydrogenase E1 component [Coxiella burnetii CbuG_Q212] Length = 934 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 11/144 (7%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N ++R + V+ GD + + +G V E+ +++ +V I++I NNQ TS Sbjct: 340 NGHKRDYAMTVMIHGDASFSGEGIVMEALSMSQTRAHHVGGSIHIILNNQVGFTTSNPHD 399 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + + + S + P V+G D AV A A+ Y A + I+++ YR GH Sbjct: 400 ARSSMYCSDIAKMLDAPVFHVNGDDPEAVVAVTQLALDYRMAFHKDVFIDLVCYRRHGHQ 459 Query: 289 MSD------PANYRTREEINEMRS 306 D PA Y+ +E R+ Sbjct: 460 EVDDPMPTQPAMYKVIQEHPTTRT 483 >gi|332983117|ref|YP_004464558.1| transketolase subunit A [Mahella australiensis 50-1 BON] gi|332700795|gb|AEE97736.1| transketolase subunit A [Mahella australiensis 50-1 BON] Length = 275 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A A K D V GDG +G ++E+ A + L N+I +I+ Sbjct: 114 GALGHGLSIGIGMALAGKMDAKDYKVYVLMGDGEQAEGSLWEAAMAAGNYKLDNLIGIID 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N + S + + SF +DG DI + Sbjct: 174 RNGLQISGSTEDVMKLESLKDKWTSFGWHIQSLDGHDITGL 214 >gi|326201958|ref|ZP_08191828.1| deoxyxylulose-5-phosphate synthase [Clostridium papyrosolvens DSM 2782] gi|325987753|gb|EGD48579.1| deoxyxylulose-5-phosphate synthase [Clostridium papyrosolvens DSM 2782] Length = 623 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S GIA A ++ D + GDGA G YE+ N A Sbjct: 106 SVHDCFNTGHS--STSISAALGIARARDIKKEDYSVMAVIGDGAMTGGMAYEALNDAGRL 163 Query: 208 NLNVIYVIENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 N N I ++ +N+ ++ +V R +K + + + G R Sbjct: 164 NSNFIVILNDNEMSIAQNVGGMSRYLSKLRTDPVYTKTKEDIDNFLDKLPNIGKKARKAV 223 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINE 303 + V Y + E L Y+Y G P + + +E+N+ Sbjct: 224 RKLKSTVKYLITPG--VFFEQLGYKYYG-----PVDGHSLDELNK 261 >gi|33592259|ref|NP_879903.1| alpha-ketoglutarate decarboxylase [Bordetella pertussis Tohama I] gi|33602644|ref|NP_890204.1| alpha-ketoglutarate decarboxylase [Bordetella bronchiseptica RB50] gi|33571904|emb|CAE41422.1| 2-oxoglutarate dehydrogenase E1 component [Bordetella pertussis Tohama I] gi|33577086|emb|CAE35642.1| 2-oxoglutarate dehydrogenase E1 component [Bordetella bronchiseptica RB50] gi|332381676|gb|AEE66523.1| 2-oxoglutarate dehydrogenase E1 component [Bordetella pertussis CS] Length = 956 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 15/169 (8%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A + RR D + V+ GD A A QG V E+ N+A ++++ NNQ Sbjct: 344 ARQERRGDGEGKQVLPVLVHGDAAFAGQGVVMETLNLAQTRGYGTGGTLHIVINNQIGFT 403 Query: 224 TSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 TS R S T + V P V+G D AV A+ Y + ++++++ + Sbjct: 404 TSDPRDSRSTLYCTDVVKMIEAPVFHVNGDDPEAVVFATRLALDYRMQFRHDVVLDIVCF 463 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 R GH+ D + + + R H P ++L +K ++G L E Sbjct: 464 RKLGHNEQDTPSL--TQPLMYKRIGHHP---GTRKLYADKLTTQGVLAE 507 >gi|84515872|ref|ZP_01003233.1| 2-oxoglutarate dehydrogenase, E1 component [Loktanella vestfoldensis SKA53] gi|84510314|gb|EAQ06770.1| 2-oxoglutarate dehydrogenase, E1 component [Loktanella vestfoldensis SKA53] Length = 987 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 41/201 (20%), Positives = 88/201 (43%), Gaps = 8/201 (3%) Query: 164 VSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 V LG A ++ +DK + ++ GD A A QG V E F ++ L ++++ Sbjct: 364 VVLGKVRAKQDQKNDTDKTKVMAILLHGDAAFAGQGVVAEGFGLSGLRGHRTGGTMHIVV 423 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ T+ + + + + P V+G D AV A + + ++ Sbjct: 424 NNQIGFTTAPHFSRSSPYPTDIALMVEAPIFHVNGDDPEAVVHAARVATEFRQKFHKDVV 483 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 ++++ YR GH+ D + +++ + +RL+ + EG++++++ Sbjct: 484 LDIICYRRFGHNEGDEPMFTNPVMYTKIKKQKTTLTLYTERLVKDGLIPEGEIEDMKAAF 543 Query: 337 RKIINNSVEFAQSDKEPDPAE 357 + +N E A + +P+ A+ Sbjct: 544 QAHLNEEFE-AGKNYKPNKAD 563 >gi|325982408|ref|YP_004294810.1| 2-oxoglutarate dehydrogenase, E1 subunit [Nitrosomonas sp. AL212] gi|325531927|gb|ADZ26648.1| 2-oxoglutarate dehydrogenase, E1 subunit [Nitrosomonas sp. AL212] Length = 943 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 13/127 (10%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N++ +++I NNQ TS R S T + Sbjct: 352 LPVLIHGDAAFAGQGVVMETLNLSQTRGYGTGGTVHIIINNQIGFTTSDPRDSRSTLYCT 411 Query: 238 RGVS-FNIPGMQVDGMDIRAVKATMDKAVAY-CRAHKGPIIIEMLTYRYRGHSMSD---- 291 V P V+G D AV + A + R HK ++I+M+ +R GH+ D Sbjct: 412 DVVKMIEAPIFHVNGDDPEAVVMVTELAFDFRMRFHKD-VVIDMVCFRRLGHNEQDEPMV 470 Query: 292 --PANYR 296 P YR Sbjct: 471 TQPKMYR 477 >gi|148256915|ref|YP_001241500.1| transketolase subunit A [Bradyrhizobium sp. BTAi1] gi|146409088|gb|ABQ37594.1| transketolase subunit A [Bradyrhizobium sp. BTAi1] Length = 282 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 36/154 (23%), Positives = 60/154 (38%), Gaps = 5/154 (3%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G + LG G+A A + + DG N+G V+E+ AA L N Sbjct: 120 GVEAATGSLGHGLPLGCGMALAGRIKGESFRVFALLSDGENNEGSVWEAAMFAAAQKLEN 179 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 V V++ N++ + + +F ++DG D+ A+ M Sbjct: 180 VCVVVDYNKWQATARSNETLMLAPLRDKWAAFGWDAHEIDGHDVGALAEAMQN---IPNG 236 Query: 271 HKGPIIIEMLTYRYRGHS-MSDPANYRTREEINE 303 P+ + T + +G S M D N+ R E Sbjct: 237 SGKPVALIAHTVKGKGVSFMEDDNNWHYRAPTAE 270 >gi|239998168|ref|ZP_04718092.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae 35/02] gi|268594019|ref|ZP_06128186.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae 35/02] gi|268547408|gb|EEZ42826.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae 35/02] Length = 637 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A +K Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAATDKLLGG 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|256619606|emb|CAZ66649.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 precursor [Solanum lycopersicum] Length = 714 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A ++ + GDGA GQ YE+ N A Sbjct: 174 SVHDAFGAGHS--STSISAGLGMAVARDLLGNNNHVISVIGDGAMTAGQAYEAMNNAGFL 231 Query: 208 NLNVIYVIENNQ 219 + N+I ++ +N+ Sbjct: 232 DSNLIVILNDNK 243 >gi|170767215|ref|ZP_02901668.1| transketolase [Escherichia albertii TW07627] gi|170123549|gb|EDS92480.1| transketolase [Escherichia albertii TW07627] Length = 276 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 12/153 (7%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K RR+ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLAGRRNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLMVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 I+ N+ + + + + + +F + V G DI + + K V A P Sbjct: 173 IDWNKQQLDGELDKIINPFDLEAKFRAFGFDVITVKGDDINELVRVV-KPVRPADAR--P 229 Query: 275 IIIEMLTYRYRG----HSMSDPANYRTREEINE 303 +++ + T + +G +S+ + R E+ E Sbjct: 230 LVVILDTIKGQGVPYLEQLSNSHHLRLTPEMKE 262 >gi|153012123|ref|YP_001373333.1| transketolase domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151564011|gb|ABS17504.1| Transketolase domain protein [Ochrobactrum anthropi ATCC 49188] Length = 311 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 8/149 (5%) Query: 141 GGSMHMFSTKN--GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 GGS+ M ++ G G + +S+ +G+A+A ++ V DG +GQ + Sbjct: 125 GGSVEMIGAEHSPGMEVTTGSLAQGLSMASGVAWARLRKKEPGKVWVYMSDGEFQEGQTW 184 Query: 199 ESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 E + + N+ +++ N+ ++S + + R SF + VDG D+ A+ Sbjct: 185 ECLAAMSYHKIDNIRVIVDVNRQQCDGAMSSVLDLGDLASRVASFGVTCRSVDGHDLGAL 244 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +A + A A P++I T Y+G Sbjct: 245 RAAAESAEA-----GKPLVILANTSPYQG 268 >gi|222085096|ref|YP_002543626.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium radiobacter K84] gi|254782056|sp|B9JAL7|DXS_AGRRK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|221722544|gb|ACM25700.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium radiobacter K84] Length = 638 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 14/112 (12%) Query: 129 LTGR---------QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR +GGIS G + S + F H +S G G+A A ++ Sbjct: 87 LTGRRDRIRTLRQEGGIS---GFTRRAESEYDPFGAAHS--STSISAGLGMAVAADLDKT 141 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 D+ + GDGA + G YE+ N A + +I ++ +N ++ SA Sbjct: 142 DRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSA 193 >gi|194097633|ref|YP_002000669.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae NCCP11945] gi|229836069|sp|B4RNW6|DXS_NEIG2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|193932923|gb|ACF28747.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae NCCP11945] gi|317163458|gb|ADV06999.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae TCDC-NG08107] Length = 637 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A +K Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAATDKLLGG 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 DRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|169337997|ref|ZP_02620836.2| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum C str. Eklund] gi|169295673|gb|EDS77806.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum C str. Eklund] Length = 650 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 45/186 (24%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +S G+A A + V GDGA G E+ N N+I Sbjct: 139 FETGHS--STSISAALGMARARDLKNEKCNVVAVIGDGALTGGMAIEALNDVGDKKTNLI 196 Query: 213 YVIENNQYAMG-------TSVSRASAQTNFSKRGVSFN---------------------- 243 ++ +NQ ++G T +SR ++K FN Sbjct: 197 VILNDNQMSIGKNVGGVSTYLSRIRIDPKYNKFKSDFNDVLRKTNIGTGVADSLSKLKSG 256 Query: 244 -----IPGMQVDGMDIRAVKAT-------MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS- 290 +PGM + M I+ + + K + + KGP++I +T + RG+ + Sbjct: 257 IKQILVPGMFFEEMGIKYLGPIDGHNIKELTKVINMAKNLKGPVLIHTITQKGRGYKFAE 316 Query: 291 -DPANY 295 DP + Sbjct: 317 KDPDRF 322 >gi|121634219|ref|YP_974464.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis FAM18] gi|166198631|sp|A1KS32|DXS_NEIMF RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|120865925|emb|CAM09662.1| putative 1-deoxyxylulose-5-phosphate synthase [Neisseria meningitidis FAM18] Length = 637 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K + Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAALGMAVADKQLGN 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 ++ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 NRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|1145803|gb|AAA86904.1| alpha-ketoglutarate dehydrogenase [Rhodobacter capsulatus] gi|1814068|gb|AAC45481.1| 2-oxoglutarate dehydrogenase [Rhodobacter capsulatus] Length = 989 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 35/177 (19%), Positives = 74/177 (41%), Gaps = 4/177 (2%) Query: 173 ANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSR 228 A+ R+ + V+ GD A A QG V E ++ + I+++ NNQ T+ Sbjct: 381 AHDEDRTQVLSVLLHGDAAFAGQGIVAECLQLSGIKGHRTGGCIHIVVNNQIGFTTAPHF 440 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + + + P V+G D AV A + + ++I++ YR GH+ Sbjct: 441 SRTSPYPTDIALMVEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDIFCYRRFGHN 500 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 D + ++ + ++ +RL+ + EG++++++ + +N E Sbjct: 501 EGDEPMFTNPAMYKNIKGHKTTLQLYTERLVADGLIPEGEIEDMKAVFQAKLNEEYE 557 >gi|288959419|ref|YP_003449760.1| 2-oxoglutarate dehydrogenase E1 component [Azospirillum sp. B510] gi|288911727|dbj|BAI73216.1| 2-oxoglutarate dehydrogenase E1 component [Azospirillum sp. B510] Length = 983 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E+ ++ L ++ I NNQ T+ + + + Sbjct: 387 REQVMGLLIHGDAAFAGQGIVAETLGLSELRGYRTGGTMHFIINNQIGFTTNPTYSRSGV 446 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A+ + + K ++I+M+ YR GH+ D Sbjct: 447 YCSDMAKMVQAPIFHVNGDDPEAVVHVSRIAIEFRQKFKRDVVIDMVCYRRHGHNEGDEP 506 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + ++R++ E ++L+ ++ + +I + K + E A S +P Sbjct: 507 GFTQPLMYKKIRAHATTRELYARQLVEENVITQSEGDQITQDFMKKLEAEFE-ASSTYKP 565 Query: 354 DPAE 357 + A+ Sbjct: 566 NKAD 569 >gi|225570637|ref|ZP_03779660.1| hypothetical protein CLOHYLEM_06737 [Clostridium hylemonae DSM 15053] gi|225160555|gb|EEG73174.1| hypothetical protein CLOHYLEM_06737 [Clostridium hylemonae DSM 15053] Length = 624 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 49/211 (23%), Positives = 83/211 (39%), Gaps = 50/211 (23%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G + K G M F + + F GH +S G G A R D Sbjct: 79 LTGRKAGFDELRKYGGMSGFPKRKESACDAFDTGHS--STSISAGLGYVEARDIRGEDYS 136 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS---------RASAQT 233 + GDG+ G YE+ N A+ N I V+ +N ++ +V R + Sbjct: 137 VISVIGDGSLTGGMAYEALNNASYLKTNFIIVLNDNHMSISENVGGMSKYLAKLRTADFY 196 Query: 234 NFSKRGVSFNIPGMQVDG----MDIRAVKATM-----------DKAVAY----------- 267 KRG++ + + V G IR K+++ D + Y Sbjct: 197 TGLKRGITNTLHKVPVVGDSAIEKIRRTKSSIKQLIVPGMFFEDMGITYLGPVPGHNLPL 256 Query: 268 -CRAHK------GPIIIEMLTYRYRGHSMSD 291 C+A + GP+++ +LT + +G+ ++ Sbjct: 257 LCKAFQEAGKIGGPVLLHVLTEKGKGYEPAE 287 >gi|262066997|ref|ZP_06026609.1| transketolase [Fusobacterium periodonticum ATCC 33693] gi|291379284|gb|EFE86802.1| transketolase [Fusobacterium periodonticum ATCC 33693] Length = 282 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 21/189 (11%) Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH-------GIVGAQVSLG 167 +L+ G A I A L R G SK + ++ F ++ GH GI + SLG Sbjct: 76 VLSKGHAAPAIYATLAER-GYFSKDELLTLRKFGSR---LQGHPDMKKLPGIEISTGSLG 131 Query: 168 TGIAFANKYRRSDKI------CVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQY 220 G++ AN + KI V GDG +GQ++E+ AA + L N+ +++N Sbjct: 132 QGLSVANGMALNAKIFNENYRTYVILGDGEVQEGQIWEAAMTAAHYKLDNLCAFLDSNNL 191 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 + +V+ K+ +F +++DG + + + ++KA C+ P +I Sbjct: 192 QIDGNVTDIMGVEPLDKKWEAFGWNVIKIDGHNFEEILSALEKA-KECKDK--PTMILAK 248 Query: 281 TYRYRGHSM 289 T + +G S Sbjct: 249 TVKGKGVSF 257 >gi|108758019|ref|YP_634170.1| 2-oxoglutarate dehydrogenase E1 component [Myxococcus xanthus DK 1622] gi|108461899|gb|ABF87084.1| 2-oxoglutarate dehydrogenase, E1 component [Myxococcus xanthus DK 1622] Length = 963 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 4/122 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A QG V E+ N++ L ++V+ NNQ T + + Sbjct: 363 RTSVMPLLIHGDAAFIGQGVVAETLNLSGLKGYTTGGTVHVVINNQVGFTTDPHDSRSSL 422 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + +IP V+G D A Y + K ++I+++ YR GH+ D Sbjct: 423 YSTAIAQMLDIPVFHVNGDDPEACVHIAKLVAEYRQTFKSDVVIDLVCYRRYGHNEGDEP 482 Query: 294 NY 295 ++ Sbjct: 483 SF 484 >gi|315179505|gb|ADT86419.1| 2-oxoglutarate dehydrogenase, E1 component [Vibrio furnissii NCTC 11218] Length = 936 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS R + T Sbjct: 350 SKVLPITIHGDSAVAGQGVVAETFNMSLARGYCVGGTVRIVVNNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNSDDPEAVAFVTRLALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|29145087|gb|AAH49104.1| Ogdh protein [Mus musculus] Length = 1019 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG VYE+F+++ L + ++V+ NNQ T A + + Sbjct: 400 MSILLHGDAAFAVQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTD 459 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 N P V+ D AV A + ++++++ YR GH+ M +P Sbjct: 460 VARVVNAPIFHVNSDDPEAVMYVCKVAAEWRNTFHKDVVVDLVCYRRNGHNEMDEP 515 >gi|302388424|ref|YP_003824246.1| Transketolase domain protein [Clostridium saccharolyticum WM1] gi|302199052|gb|ADL06623.1| Transketolase domain protein [Clostridium saccharolyticum WM1] Length = 279 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S+ G+A + + GDG +GQV+E+ AA L+ ++ +I+ Sbjct: 115 GSLGQGISVAVGMALSGALSLKNYRVYALAGDGEIQEGQVWEAAMFAAHRKLDHLVVIID 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + +V + ++ +F + VDG + ++KA R KG P Sbjct: 175 NNNLQIDGTVEEICSPYPIDQKFEAFGFHAVTVDGHSFQ----ELEKAFLKARETKGKPT 230 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 231 VIIAKTVKGKGISF 244 >gi|262182675|ref|ZP_06042096.1| alpha-ketoglutarate decarboxylase [Corynebacterium aurimucosum ATCC 700975] Length = 1233 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 9/156 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD + G V E+ N++ L ++V+ NNQ T+ + + Sbjct: 642 VPIMLHGDASFTGLGVVQETINLSQLRGYTTGGTVHVVVNNQVGFTTTPDSGRSTHYATD 701 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 F+ P V+G + AV A Y R + I+++ YR RGH+ +D + T Sbjct: 702 LAKGFDCPVFHVNGDNPEAVVWVGKLATEYRRRFGKDVFIDLVCYRLRGHNEADDPSM-T 760 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 + ++ ++ +H + VR+R + GDL + E Sbjct: 761 QPQLYDIIDDH---KSVRERYTE-ELIGRGDLSDEE 792 >gi|269925535|ref|YP_003322158.1| Transketolase central region [Thermobaculum terrenum ATCC BAA-798] gi|269789195|gb|ACZ41336.1| Transketolase central region [Thermobaculum terrenum ATCC BAA-798] Length = 624 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 12/127 (9%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G + + GIA + KY + ++ V+C GD +G ++E+F A + L N+I + Sbjct: 122 GSLGQGLPIAIGIALSGKYLEKLPYRVWVLC-GDSEMAEGSMWEAFQHAGYYKLDNLIAI 180 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI--------RAVKATMDKAVA 266 ++ N+ +++R +F +++DG ++ A++ T V Sbjct: 181 VDVNRLGQRGETMLGWNLDGYAERAKAFGWHVIEIDGHNLEEIDRAYEEAIQVTGQPTVI 240 Query: 267 YCRAHKG 273 R HKG Sbjct: 241 LARTHKG 247 >gi|20803909|emb|CAD31487.1| PROBABLE TRANSKETOLASE ALPHA SUBUNIT PROTEIN [Mesorhizobium loti R7A] Length = 279 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 3/109 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+ K +RS DG +G +E+ AA L N+I +++ Sbjct: 119 GSLGHGLGIAVGMCLGLKRKRSGSFVYNLMSDGELGEGSTWEAAMSAAHHRLDNLIAIVD 178 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NNQ A G S + S++ + + +F +VDG DI AV+ D A Sbjct: 179 FNNQQADGPSTAMLSSEP-VTDKFEAFGWHAQRVDGNDIEAVRMAFDLA 226 >gi|83589105|ref|YP_429114.1| transketolase subunit A [Moorella thermoacetica ATCC 39073] gi|83572019|gb|ABC18571.1| transketolase subunit A [Moorella thermoacetica ATCC 39073] Length = 271 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +++ G+A A + D V GDG +G V+E AA ++L N+ +++ Sbjct: 117 GSLGHGLAVANGMALAGRLDGRDYHVYVLLGDGELEEGMVWEGAMAAAHYHLDNLTAIVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + V + + + +F M +DG D + +++A R KG P Sbjct: 177 HNHLQIDGRVEEVMSPEPVADKFRAFGWEVMTIDGHDFGQILDALERA----REVKGKPT 232 Query: 276 IIEMLTYRYRGHS 288 +I T + +G S Sbjct: 233 VIIAETIKGKGVS 245 >gi|254471675|ref|ZP_05085076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. JE062] gi|211958877|gb|EEA94076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. JE062] Length = 633 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 5/100 (5%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 + GG+S G + S + F GH +S G G+A A D + GDGA Sbjct: 93 QDGGLS---GFTKRSESEYDPFGAGHS--STSISAGLGMAVARDLAGGDNNVIAVIGDGA 147 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + G YE+ N A N +I ++ +N ++ V SA Sbjct: 148 MSAGMAYEAMNNAGALNSRLIVILNDNDMSIAPPVGALSA 187 >gi|33597743|ref|NP_885386.1| alpha-ketoglutarate decarboxylase [Bordetella parapertussis 12822] gi|33574171|emb|CAE38502.1| 2-oxoglutarate dehydrogenase E1 component [Bordetella parapertussis] Length = 957 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 27/175 (15%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A + RR D + V+ GD A A QG V E+ N+A ++++ NNQ Sbjct: 344 ARQERRGDGEGKQVLPVLVHGDAAFAGQGVVMETLNLAQTRGYGTGGTLHIVINNQIGFT 403 Query: 224 TSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 TS R S T + V P V+G D AV A+ Y + ++++++ + Sbjct: 404 TSDPRDSRSTLYCTDVVKMIEAPVFHVNGDDPEAVVFATRLALDYRMQFRHDVVLDIVCF 463 Query: 283 RYRGH------SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 R GH S++ P Y+ R H P ++L +K ++G L E Sbjct: 464 RKLGHNEQDTPSLTQPLMYK--------RIGHHP---GTRKLYADKLTTQGVLAE 507 >gi|303244665|ref|ZP_07330997.1| Transketolase domain protein [Methanothermococcus okinawensis IH1] gi|302484973|gb|EFL47905.1| Transketolase domain protein [Methanothermococcus okinawensis IH1] Length = 274 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 1/114 (0%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G S+ G+A + + + V GDG +GQV+E+ A + L N Sbjct: 113 GIEANTGSLGQGFSVAVGMALGCRIDKLNNNVYVLLGDGECQEGQVWEAAMAAFHYKLDN 172 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 +I +++ N+ + + ++ +F ++DG D + + T++KA Sbjct: 173 LIGIVDRNKLQIDGCTEDVMCLGDLREKFKAFGWDVFEIDGHDFKQIVDTIEKA 226 >gi|254437793|ref|ZP_05051287.1| 2-oxoglutarate dehydrogenase, E1 component [Octadecabacter antarcticus 307] gi|198253239|gb|EDY77553.1| 2-oxoglutarate dehydrogenase, E1 component [Octadecabacter antarcticus 307] Length = 986 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 38/189 (20%), Positives = 82/189 (43%), Gaps = 7/189 (3%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R+ + ++ GD A A QG V E F ++ L ++++ NNQ T+ + Sbjct: 377 NDSDRTKSMAILLHGDAAFAGQGVVAEGFGLSGLRGHRTGGTMHIVVNNQIGFTTAPHFS 436 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D AV A + + ++++++ YR GH+ Sbjct: 437 RSSPYPTDIALMVEAPIFHVNGDDPEAVVHAARVATEFRQKFHKDVVLDIICYRRFGHNE 496 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF-AQ 348 D + +++ + RL+ + EG+++ ++ + + + EF A Sbjct: 497 GDEPMFTNPLMYKKIKQQKTTLTLYTDRLVKDGLVPEGEIEGMKEEFQTYL--ATEFDAG 554 Query: 349 SDKEPDPAE 357 +D +P+ A+ Sbjct: 555 TDYKPNKAD 563 >gi|154504793|ref|ZP_02041531.1| hypothetical protein RUMGNA_02302 [Ruminococcus gnavus ATCC 29149] gi|153794967|gb|EDN77387.1| hypothetical protein RUMGNA_02302 [Ruminococcus gnavus ATCC 29149] Length = 274 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 10/152 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K D+ V GDG +G V+E A + L N+ VI+ Sbjct: 112 GSLGHGLPVCVGMAKAAKMDHKDRRVYVVMGDGELAEGSVWEGAMAAHQYQLDNLCAVID 171 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPI 275 N+ + + + +R SF + V DG DI + A ++A R P Sbjct: 172 RNRLQISGNTEDVMGHDDLHERFRSFGWHVIDVKDGNDIDELHAAFEEA---KRVKGKPT 228 Query: 276 IIEMLTYRYRGHS-MSDPANYR----TREEIN 302 ++ T + +G S M + AN+ T+EE + Sbjct: 229 VLIANTVKGKGSSIMENKANWHHKVPTQEEYD 260 >gi|261393206|emb|CAX50825.1| 1-deoxy-D-xylulose-5-phosphate synthase (1-deoxyxylulose-5-phosphate synthase; DXP synthase; DXPS) [Neisseria meningitidis 8013] Length = 637 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K + Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAVADKQLGN 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 ++ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 NRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|260767663|ref|ZP_05876598.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio furnissii CIP 102972] gi|260617172|gb|EEX42356.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio furnissii CIP 102972] Length = 936 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS R + T Sbjct: 350 SKVLPITIHGDSAVAGQGVVAETFNMSLARGYCVGGTVRIVVNNQVGFTTSNPRDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNSDDPEAVAFVTRLALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|241701273|ref|XP_002411924.1| 2-oxoglutarate dehydrogenase, putative [Ixodes scapularis] gi|215504873|gb|EEC14367.1| 2-oxoglutarate dehydrogenase, putative [Ixodes scapularis] Length = 831 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 5/117 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD + A QG + E+ ++ L +V ++++ NNQ T + S Sbjct: 237 LPVQVHGDASFAAQGVIMETLALSKLPGFSVGGSVHLVVNNQIGFTTPARIGRSSPYVSD 296 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 + P + V+G D AV + A+ Y +A ++++ML +R GH+ M DP Sbjct: 297 VMKMISAPVIHVNGDDPEAVALSTRLALEYRQAFGEDVLLDMLCFRRWGHNEMDDPT 353 >gi|332992373|gb|AEF02428.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas sp. SN2] Length = 625 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 50/225 (22%), Positives = 88/225 (39%), Gaps = 58/225 (25%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR +S + K G +H F S + F GH +S G+A A + ++ Sbjct: 88 LTGRAKQMSTIRQKDG-LHPFPWPPESDYDTFAVGHS--STSISAALGMAVAAEQEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 V GDGA G +E+ N A N +++ V+ +N+ ++ +V ++ G Sbjct: 145 KVVAVIGDGAITAGMAFEAMNHAGDINKDMVVVLNDNEMSISENVGALNSHLARLLTGNV 204 Query: 242 FN-------------------------------IPGM-----------QVDGMDIRAVKA 259 FN +PG +DG D+ AV Sbjct: 205 FNSIRDGSKKLLSNVPPIKEFASRAEEHLKGMVVPGTIFEELGFNYIGPIDGHDVDAVVD 264 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEIN 302 T+ R KGP ++ ++T + +G++++ DP + + N Sbjct: 265 TLRN----MRKFKGPQLLHVVTKKGKGYALAEKDPIKFHAVPKFN 305 >gi|218460772|ref|ZP_03500863.1| alpha-ketoglutarate decarboxylase [Rhizobium etli Kim 5] Length = 333 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 12/184 (6%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG + E ++ L V ++VI NNQ T+ + + + Sbjct: 12 RAKVLPLLIHGDAAFAGQGVIAEILGLSGLRGHRVAGTMHVIINNQIGFTTNPAFSRSSP 71 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P + V+G D AV A + +I+M YR GH+ D Sbjct: 72 YPSDVAKMIEAPILHVNGDDPEAVVYAAKIATEFR-------MIDMFCYRRYGHNEGDEP 124 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ + +R + ++ RL+ ++G++++++ + R + E QS K P Sbjct: 125 SFTQPKMYKVIRGHKTVLQLYADRLVREGLLTDGEVEKMKADWRAHLEQEFEAGQSYK-P 183 Query: 354 DPAE 357 + A+ Sbjct: 184 NKAD 187 >gi|170585968|ref|XP_001897753.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor [Brugia malayi] gi|158594777|gb|EDP33356.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative [Brugia malayi] Length = 1029 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 5/126 (3%) Query: 171 AFANKYRRSDK-ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS 225 +F N D+ + ++ GD A + QG V E+FN+ L + I+++ NNQ T Sbjct: 395 SFYNGDENGDRTMAILLHGDAAFSGQGVVMETFNLNDLKAYSTHGTIHLVVNNQIGFTTD 454 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + + G P V+ D AV + A + R K +II+++ YR Sbjct: 455 PRCSRSSPYCTDIGRVVGCPIFHVNSDDPEAVMHVCNVAADWRRTFKKDVIIDLVCYRRY 514 Query: 286 GHSMSD 291 GH+ D Sbjct: 515 GHNELD 520 >gi|158295750|ref|XP_001688858.1| AGAP006366-PB [Anopheles gambiae str. PEST] gi|157016186|gb|EDO63864.1| AGAP006366-PB [Anopheles gambiae str. PEST] Length = 1034 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 35/171 (20%), Positives = 72/171 (42%), Gaps = 4/171 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG V+E+ +++ L + I+++ NNQ T + + + Sbjct: 425 MSILLHGDAAFCGQGVVFETMHLSDLPDYTTHGTIHIVVNNQIGFTTDPRHSRSSPYCTD 484 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+G D AV A + +II++++YR GH+ D + Sbjct: 485 VARVVNAPIFHVNGDDPEAVMHVCKVAAEWRATFHKDVIIDIVSYRRNGHNEIDEPMFTQ 544 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++R ++ +L+ + ++K ++ KI + E A+ Sbjct: 545 PLMYKKIRGTKPALDIYANQLITEGVVTAEEVKSVKDKYEKICEEAFEQAK 595 >gi|332283682|ref|YP_004415593.1| alpha-ketoglutarate decarboxylase [Pusillimonas sp. T7-7] gi|330427635|gb|AEC18969.1| alpha-ketoglutarate decarboxylase [Pusillimonas sp. T7-7] Length = 956 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 16/145 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR D+ + V+ GD A A QG V E+ N+A ++++ NNQ Sbjct: 340 GSVRARQDRRGDEQGLQVLPVLVHGDAAFAGQGVVMETLNLAQTRGYGTGGTLHIVINNQ 399 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P V+G D AV A+ Y ++++ Sbjct: 400 IGFTTSDPRDSRSTLYCTDVVKMIEAPVFHVNGDDPEAVVYVTQLALDYRMQFHHDVVVD 459 Query: 279 MLTYRYRGH------SMSDPANYRT 297 ++ +R GH S++ P Y++ Sbjct: 460 IVCFRKLGHNEQDTPSLTQPLMYKS 484 >gi|302805853|ref|XP_002984677.1| hypothetical protein SELMODRAFT_268893 [Selaginella moellendorffii] gi|300147659|gb|EFJ14322.1| hypothetical protein SELMODRAFT_268893 [Selaginella moellendorffii] Length = 636 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH NG G G G +S G G+A A + Sbjct: 68 ILTGRRSRMHTLRQTNGLSGFTKRSESEYDSFGAGHSSTSISAGLGMAVARDLMGNKNHV 127 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA GQ YE+ N A + N+I ++ +N+ Sbjct: 128 ISVIGDGAMTAGQAYEAMNNAGYLDSNMIVILNDNK 163 >gi|295108284|emb|CBL22237.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruminococcus obeum A2-162] Length = 620 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 82/218 (37%), Gaps = 61/218 (27%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G K G M F + + F GH +S G G A + Sbjct: 79 LTGRKEGFKNLRKEGGMSGFPKRCESDCDAFDAGHS--SNSISAGLGYVRARDLQGQKYR 136 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM-----GTSVSRASAQTNFSK 237 V GDGA G YE+ N AA N I V+ +N ++ G S ++ +T Sbjct: 137 VVSVIGDGALTGGMAYEALNNAAELKTNFIIVLNDNNMSISKNVGGMSSYLSALRTAEVY 196 Query: 238 RGVSFN------------------------------IPGM-----------QVDGMDIRA 256 G+ N IPGM VDG D+R Sbjct: 197 TGMKINVTKTLKKIPKVGTAVIDTMRRTKSSIKQLIIPGMLFENMGLTYLGPVDGHDMRQ 256 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + ++A + +GP+I+ +LT + RG+ +PA+ Sbjct: 257 MMKLFNEA----KRVEGPVIVHVLTQKGRGY---EPAS 287 >gi|255022131|ref|ZP_05294134.1| 1-deoxy-D-xylulose 5-phosphate synthase [Acidithiobacillus caldus ATCC 51756] gi|254968395|gb|EET25954.1| 1-deoxy-D-xylulose 5-phosphate synthase [Acidithiobacillus caldus ATCC 51756] Length = 624 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 12/107 (11%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+G K+G G G G +S G+A A K + + Sbjct: 81 ILTGRGPLFPRLRMKDGLSGFLKRDESPFDAFGAGHSSTSISAALGMAVAAKLTQRQRQV 140 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 V GDGA G YE+ N A + + +++ V+ +N+ ++ +V S Sbjct: 141 VAIIGDGAMTAGLAYEALNNAGVLDADLLVVLNDNEMSISPNVGAVS 187 >gi|261338088|ref|ZP_05965972.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bifidobacterium gallicum DSM 20093] gi|270276707|gb|EFA22561.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bifidobacterium gallicum DSM 20093] Length = 639 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 70/177 (39%), Gaps = 9/177 (5%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH G VSL TG+A D V GDGA + +E N AA Sbjct: 108 SEHDQFVLGH--TGTAVSLATGLAKMRDMNHDDYHVVAVLGDGALSSAVAFEGLNNAAEQ 165 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM-QVDGMDIRAVKATMD---- 262 N+I V +N+ ++ + Q + P + + G+D R V+ D Sbjct: 166 GGNIIIVFNDNEMSIAENHGGMYGQLARLRESQGTAQPNLFEALGLDYRYVEHGNDVHAM 225 Query: 263 -KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 +A+ + P+++ + T + G D A+Y E E +P+ Q L Sbjct: 226 IQALREVKDTDHPVVLHIHTCKGLGLDQQD-AHYGVLEGRCEANHWQNPLAQANAPL 281 >gi|51234083|gb|AAT97962.1| putative 1-deoxy-D-xylulose 5-phosphate synthase 2 [Solanum habrochaites] Length = 714 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A ++ + GDGA GQ YE+ N A Sbjct: 174 SAHDAFGAGHS--STSISAGLGMAVARDLLGNNNHVISVIGDGAMTAGQAYEAMNNAGFL 231 Query: 208 NLNVIYVIENNQ 219 + N+I ++ +N+ Sbjct: 232 DSNLIVILNDNK 243 >gi|218679645|ref|ZP_03527542.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium etli CIAT 894] Length = 248 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 34/68 (50%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A ++D+ + GDGA + G YE+ N A + +I ++ +N ++ Sbjct: 126 ISAGLGMAIAADLDKNDRRIIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIA 185 Query: 224 TSVSRASA 231 SA Sbjct: 186 PPTGAMSA 193 >gi|153810472|ref|ZP_01963140.1| hypothetical protein RUMOBE_00853 [Ruminococcus obeum ATCC 29174] gi|149833651|gb|EDM88732.1| hypothetical protein RUMOBE_00853 [Ruminococcus obeum ATCC 29174] Length = 620 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 54/218 (24%), Positives = 84/218 (38%), Gaps = 61/218 (27%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G K G M F + + F GH +S G G A + Sbjct: 79 LTGRKEGFKNLRKEGGMSGFPKRCESDCDTFDAGHS--SNSISAGLGYVRARDLLGQNYR 136 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM-----GTSVSRASAQTNFSK 237 V GDGA G YE+ N AA N I V+ +N ++ G S ++ +T + Sbjct: 137 VVSVIGDGALTGGMAYEALNNAAELKTNFIIVLNDNNMSISKNVGGMSSYLSALRTAEAY 196 Query: 238 RGVSFN------------------------------IPGM-----------QVDGMDIRA 256 G+ N IPGM VDG ++R Sbjct: 197 TGMKLNVTKTLKKVPKVGTAVVDTMRRTKSSIKQLIIPGMLFENMGLTYLGPVDGHNMRQ 256 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + ++A + +GP+I+ +LT++ RG+ +PA+ Sbjct: 257 MMKLFNEA----KRVEGPVIVHVLTHKGRGY---EPAS 287 >gi|332306149|ref|YP_004434000.1| 2-oxoglutarate dehydrogenase, E1 subunit [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173478|gb|AEE22732.1| 2-oxoglutarate dehydrogenase, E1 subunit [Glaciecola agarilytica 4H-3-7+YE-5] Length = 940 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 101/256 (39%), Gaps = 43/256 (16%) Query: 63 RRFEEKAGQ-----LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 +RF + G L G+ G C G + V+VGM A+R ++L Sbjct: 232 KRFSLEGGDALVPMLKGLISHAGEC----GTKEVVVGM------------AHRGRINVLV 275 Query: 118 --CGVDASKIMAELTGRQ-----GGISKGKGGSMHMFSTKNG-------FYGGHGIVGAQ 163 G + S + E +G+ G K G F+T G F H + Sbjct: 276 NVLGKNPSVLFDEFSGKHDNTLGAGDVKYHAGYSSDFATPGGNVHLALAFNPSHLEIVNP 335 Query: 164 VSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 V +G+ A ++ D + + GD A A QG V E+FN++ V + ++ Sbjct: 336 VVIGSVRARLDRRNCDDGSVVLPITIHGDSAIAGQGVVQETFNMSQTRGFKVGGTVRIVI 395 Query: 217 NNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 NNQ TS + + T + + P V+ D AV A+ Y K + Sbjct: 396 NNQVGFTTSNTEDTRSTQYCTDIAKMVQAPIFHVNSDDPEAVMFVTKLALDYRNKFKRDV 455 Query: 276 IIEMLTYRYRGHSMSD 291 +I+++ YR GH+ +D Sbjct: 456 VIDLVCYRRHGHNEAD 471 >gi|260891066|ref|ZP_05902329.1| transketolase [Leptotrichia hofstadii F0254] gi|260859093|gb|EEX73593.1| transketolase [Leptotrichia hofstadii F0254] Length = 272 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K +D GDG +GQV+E+ AA + L N++ +++ Sbjct: 118 GSLGQGLSAANGMALSAKIYNNDYRVYAILGDGELQEGQVWEAAMTAAHYKLDNLVAIVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + VS ++ +F +++DG + + +D A R KG P Sbjct: 178 YNNLQIDGKVSDVMDVAPIGEKFKAFKWNVIEIDGHNYEEIINALDTA----RTVKGQPT 233 Query: 276 IIEMLTYRYRGHS 288 +I T + +G S Sbjct: 234 VIVANTVKGKGVS 246 >gi|260891500|ref|ZP_05902763.1| transketolase [Leptotrichia hofstadii F0254] gi|260858883|gb|EEX73383.1| transketolase [Leptotrichia hofstadii F0254] Length = 276 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K +D GDG +GQV+E+ AA + L N++ +++ Sbjct: 122 GSLGQGLSAANGMALSAKIYNNDYRVYAILGDGELQEGQVWEAAMTAAHYRLDNLVAIVD 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + VS ++ +F +++DG + + +D A R KG P Sbjct: 182 YNNLQIDGKVSDVMDVAPIGEKFKAFKWNVIEIDGHNYEEIINALDTA----RTVKGQPT 237 Query: 276 IIEMLTYRYRGHS 288 +I T + +G S Sbjct: 238 VIVANTVKGKGVS 250 >gi|218885234|ref|YP_002434555.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756188|gb|ACL07087.1| deoxyxylulose-5-phosphate synthase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 646 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 49/207 (23%), Positives = 77/207 (37%), Gaps = 57/207 (27%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYG-GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDG 190 R GGIS G M + +G GH +S G+A A D V GDG Sbjct: 110 RGGGIS----GFPKMAESPYDHFGVGHS--STSISAALGMAMARDLAGGDNNVVAVIGDG 163 Query: 191 AANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS--AQTNFSKRGV-------- 240 + G +E N A + +I V+ +N+ ++ +V S N SKR V Sbjct: 164 SMTAGLAFEGLNQAGAMDRKLIVVLNDNEMSISKNVGALSLFLSRNLSKRWVRRMKKDME 223 Query: 241 -------------------------SFNIPGM-----------QVDGMDIRAVKATMDKA 264 F PGM V+G D++A+ T D A Sbjct: 224 TFMRSIPGIGEDMLGYAKRSEHSLKGFFTPGMLFEAFGFNYIGPVNGHDVKALTRTFDMA 283 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSD 291 R P+++ +LT + +G++ ++ Sbjct: 284 ----RTLDEPVLLHVLTRKGKGYAPAE 306 >gi|158295748|ref|XP_001688857.1| AGAP006366-PE [Anopheles gambiae str. PEST] gi|158295754|ref|XP_001688859.1| AGAP006366-PD [Anopheles gambiae str. PEST] gi|157016185|gb|EDO63863.1| AGAP006366-PE [Anopheles gambiae str. PEST] gi|157016188|gb|EDO63865.1| AGAP006366-PD [Anopheles gambiae str. PEST] Length = 1014 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 35/171 (20%), Positives = 72/171 (42%), Gaps = 4/171 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG V+E+ +++ L + I+++ NNQ T + + + Sbjct: 405 MSILLHGDAAFCGQGVVFETMHLSDLPDYTTHGTIHIVVNNQIGFTTDPRHSRSSPYCTD 464 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+G D AV A + +II++++YR GH+ D + Sbjct: 465 VARVVNAPIFHVNGDDPEAVMHVCKVAAEWRATFHKDVIIDIVSYRRNGHNEIDEPMFTQ 524 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++R ++ +L+ + ++K ++ KI + E A+ Sbjct: 525 PLMYKKIRGTKPALDIYANQLITEGVVTAEEVKSVKDKYEKICEEAFEQAK 575 >gi|329121592|ref|ZP_08250213.1| deoxyxylulose-5-phosphate synthase [Dialister micraerophilus DSM 19965] gi|327468747|gb|EGF14224.1| deoxyxylulose-5-phosphate synthase [Dialister micraerophilus DSM 19965] Length = 584 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +SL G+A A R SD+ V GDG+ + GQ ES +IA N+I Sbjct: 110 FTIGH--TSTSLSLALGLAKARDMRGSDENVVAIIGDGSLSGGQALESLSIAGELGTNLI 167 Query: 213 YVIENN 218 ++ +N Sbjct: 168 MIVNDN 173 >gi|196003524|ref|XP_002111629.1| hypothetical protein TRIADDRAFT_23841 [Trichoplax adhaerens] gi|190585528|gb|EDV25596.1| hypothetical protein TRIADDRAFT_23841 [Trichoplax adhaerens] Length = 988 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 10/123 (8%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG VYE+ ++ + N + ++++ NNQ T + + + Sbjct: 376 ILVHGDAAFAGQGVVYETVQLSNVDNYSTGGTVHIVVNNQIGFTTDPRNGRSSSYCTDVA 435 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD------PA 293 N P V+ D AV A Y + I I+++ YR GH+ D PA Sbjct: 436 KVVNAPIFHVNADDPEAVVYASRVAAEYRDTFQKDIFIDLVCYRRYGHNEMDNPEFTHPA 495 Query: 294 NYR 296 YR Sbjct: 496 MYR 498 >gi|308177009|ref|YP_003916415.1| oxoglutarate dehydrogenase (succinyl-transferring) [Arthrobacter arilaitensis Re117] gi|307744472|emb|CBT75444.1| oxoglutarate dehydrogenase (succinyl-transferring) [Arthrobacter arilaitensis Re117] Length = 1250 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 10/124 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E ++ L ++VI NNQ T+ S + + + Sbjct: 661 LPILVHGDAAFAGQGVVSEVLAMSQLPGYKTGGTVHVIVNNQIGFTTAPSSSRSSVYATD 720 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 + P V+G D AV A Y + ++I+++ YR RGH SM+ Sbjct: 721 VARTVQAPIFHVNGDDPEAVVHVGQLAFEYRQKFGKDVVIDLVCYRRRGHNEGDDPSMTQ 780 Query: 292 PANY 295 P Y Sbjct: 781 PIMY 784 >gi|295676269|ref|YP_003604793.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia sp. CCGE1002] gi|295436112|gb|ADG15282.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia sp. CCGE1002] Length = 953 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 16/145 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D+ + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 338 GSAKARMDRRGDENGIQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P + V+G D AV + A+ + ++++ Sbjct: 398 IGFTTSDPRDSRSTLYCSDVVKMIEAPVLHVNGDDPEAVVLAIQMAIDFRMQFHKDVVVD 457 Query: 279 MLTYRYRGHSMSD------PANYRT 297 ++ +R GH+ D P Y+T Sbjct: 458 IVCFRKLGHNEQDTPAVTQPLMYKT 482 >gi|260889094|ref|ZP_05900357.1| transketolase, N- subunit [Leptotrichia hofstadii F0254] gi|260861154|gb|EEX75654.1| transketolase, N- subunit [Leptotrichia hofstadii F0254] Length = 282 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 8/149 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV-IE 216 G +G +S+ GIA + + + + GDG N+GQ +E+F A +LN + V ++ Sbjct: 121 GSLGQGISIAAGIAKSLQIDKKNNRVFCIIGDGEINEGQCWEAFQFIAHHSLNNLTVFLD 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + ++ +F ++ SF + V G DI + D + ++ P+ Sbjct: 181 YNKKQLDGALDEIIKPFSFEEKMKSFGFDAVTVKGNDIEKM---YDILKVPRKNNEKPLF 237 Query: 277 IEMLTYRYRG----HSMSDPANYRTREEI 301 I + T + +G M + + R +E+ Sbjct: 238 IILDTIKGQGVEYIEKMKNSHHLRLTDEL 266 >gi|217035466|pdb|3F6B|X Chain X, Crystal Structure Of Benzoylformate Decarboxylase In Complex With The Pyridyl Inhibitor Paa gi|217035467|pdb|3F6E|X Chain X, Crystal Structure Of Benzoylformate Decarboxylase In Complex With The Pyridyl Inhibitor 3-Pkb Length = 525 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 45/160 (28%) Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 ++M + + ++ G +G + G+ A R+ + GDG+AN ++I Sbjct: 386 LNMRNPGSYYFCAAGGLGFALPAAIGVQLAEPERQ----VIAVIGDGSAN-------YSI 434 Query: 204 AALW-----NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA-- 256 +ALW N+ I+VI NN GT A F+ + N+PG+ V G+D RA Sbjct: 435 SALWTAAQYNIPTIFVIMNN----GTY----GALRWFAGVLEAENVPGLDVPGIDFRALA 486 Query: 257 ---------------VKATMDKAVAYCRAHKGPIIIEMLT 281 +K ++ +A+ + KGP++IE+ T Sbjct: 487 KGYGVQALKADNLEQLKGSLQEAL----SAKGPVLIEVST 522 >gi|319760463|ref|YP_004124401.1| 2-oxoglutarate dehydrogenase E1 component [Candidatus Blochmannia vafer str. BVAF] gi|318039177|gb|ADV33727.1| 2-oxoglutarate dehydrogenase E1 component [Candidatus Blochmannia vafer str. BVAF] Length = 967 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%) Query: 175 KYRRSDKICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTS----V 226 K + + + +V GD A + QG V ESFN+A + ++++ NNQ TS + Sbjct: 366 KLQNNTVLPIVIHGDAAISAQGVVQESFNMANTRAYGIGGTVHIVINNQIGFTTSNIYDL 425 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S T+ +K P + ++ D+ AV A+ + + I+I+++ YR G Sbjct: 426 RSTSYCTDIAKM---IQAPIVHINADDVNAVIFVTRFALNFRKKFNKDIVIDLVCYRRHG 482 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 H+ +D + T+ + + NH + + + LH Sbjct: 483 HNEADEPSV-TQPVMYQKIHNHLKVVDIYAQFLH 515 >gi|324507838|gb|ADY43313.1| Transketolase [Ascaris suum] Length = 660 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S G+A+ KY V C GDG + +G V+E+ ++ + L N++ ++ Sbjct: 160 GSLGQGLSCAAGMAYVGKYIDKASYRVYCLLGDGESAEGSVWEAAGFSSYYKLDNLVAIV 219 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 + N+ ++KR +F + VDG D+ + A R KG P Sbjct: 220 DVNRLGQSQQTMLGHDTAAYAKRFEAFGFNAVVVDGNDVSQLLGAFRNA----RETKGKP 275 Query: 275 IIIEMLTYRYRG-HSMSDPANYRTREEINEMRSNHDPIEQVR 315 I T + +G ++ D N+ + PIE +R Sbjct: 276 TAIIAKTLKGKGIENIEDKDNWHGKPV---------PIETIR 308 >gi|224824893|ref|ZP_03697999.1| Transketolase domain protein [Lutiella nitroferrum 2002] gi|224602564|gb|EEG08741.1| Transketolase domain protein [Lutiella nitroferrum 2002] Length = 284 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 21/238 (8%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSL------TEG-DQ 104 AYR IRR+ + G++ G G VG G+ + AV G M+ EG D+ Sbjct: 16 AYR----IRRYALQMGEVQGQGYVGQALGWADVL----AVAYGHAMNYRPEEPEWEGRDR 67 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + ++ + L + + I+ E G + M + G G +G + Sbjct: 68 FLLSHGHYAIALYAALIEAGIIPESELETYGSDDSRLPMSGMATYTPGMEISGGSLGQGL 127 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAM 222 +G G+A +++ + DG ++G +E+ AA L N+I +++ NNQ A Sbjct: 128 PIGVGMALGLRFKNNPAFVYNSMSDGELDEGSTWEAAMSAAHHGLSNLICLVDINNQQAD 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 G S S+ + + +F ++DG D+ AV D A A I+ + L Sbjct: 188 GPS-SKVLGFEPLADKWAAFGWHVQRIDGNDLPAVIEAFDTARNLQTAQPRVILFDTL 244 >gi|126342173|ref|XP_001379400.1| PREDICTED: similar to Transketolase [Monodelphis domestica] Length = 625 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG A++G V+E+ A+ + L N++ + Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVFCLLGDGEASEGSVWEALAFASHYKLDNLVAIF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + + KR +F VDG D+ + KA + P Sbjct: 183 DVNRLGQSEAAPLQHCTDVYRKRCEAFGWNTYVVDGHDVEHLCEAFWKAA---QVKNQPT 239 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 240 AIVAKTFKGRG 250 >gi|641968|gb|AAA61785.1| alpha-ketoglutarate dehydrogenase [Coxiella burnetii] Length = 933 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 11/144 (7%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N ++R + V+ GD + + +G V E+ +++ +V I++I NNQ TS Sbjct: 340 NGHKRDYAMTVMIHGDASFSGEGIVMEALSMSQTRAHHVGGSIHIILNNQVGFTTSNPHD 399 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + + + S + P V+G D AV A A+ Y A + I+++ YR GH Sbjct: 400 ARSSMYCSDIAKMLDAPVFHVNGDDPEAVVAVTQLALDYRMAFHKDVFIDLVCYRRHGHQ 459 Query: 289 MSD------PANYRTREEINEMRS 306 D PA Y+ +E R+ Sbjct: 460 EVDDPMPTQPAMYKVIQEHPTTRT 483 >gi|73541735|ref|YP_296255.1| alpha-ketoglutarate decarboxylase [Ralstonia eutropha JMP134] gi|72119148|gb|AAZ61411.1| 2-oxoglutarate dehydrogenase E1 component [Ralstonia eutropha JMP134] Length = 950 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G + A + RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 336 GSSKARQERRGDAGHKEVLPVQVHGDAAFAGQGVVMETLNLAQTRGYGTGGSMHIVINNQ 395 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV M AV + ++++ Sbjct: 396 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVYAMQLAVDFRMEFNKDVVVD 455 Query: 279 MLTYRYRGHSMSD 291 ++ +R GH+ D Sbjct: 456 IICFRKLGHNEQD 468 >gi|257884544|ref|ZP_05664197.1| transketolase [Enterococcus faecium 1,231,501] gi|257820382|gb|EEV47530.1| transketolase [Enterococcus faecium 1,231,501] Length = 587 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 7/99 (7%) Query: 129 LTGRQGGISKG-----KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 LTGR+ G KG G S S + F GH +SL TG+A + ++ Sbjct: 85 LTGRKNGFEKGHYHEVSGYSNQHESEHDYFTVGH--TSTSISLATGLAKSRDLKKESGNV 142 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V GDG+ + G +E N N+I ++ +N+ ++ Sbjct: 143 VAFIGDGSLSGGLAFEGLNNGGALQTNLIVLVNDNEMSI 181 >gi|238853175|ref|ZP_04643562.1| 1-deoxy-d-xylulose-5-phosphate synthase 2 [Lactobacillus gasseri 202-4] gi|238834229|gb|EEQ26479.1| 1-deoxy-d-xylulose-5-phosphate synthase 2 [Lactobacillus gasseri 202-4] Length = 586 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 20/147 (13%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G V+L TG+A A + + GDG+ G +E FN AA N+I Sbjct: 115 YYAVGHTSTSVALATGMARARDMMGNHENITALIGDGSLTGGLAFEGFNNAADEKHNLII 174 Query: 214 VIENNQYAMGTSV------------SRASAQTN-FSKRGVSFNIPGMQVDGMDIRAVKAT 260 V+ +NQ ++ +V S A+ N F+ G+ + G G DI+ T Sbjct: 175 VVNDNQMSIDDNVGGVVTALKKLRESNGQAEDNPFTAMGLDYKYVGQ---GNDIK----T 227 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGH 287 M A + PI++ + T + +G+ Sbjct: 228 MIDAFKEVKDIDHPIVLHINTLKGKGY 254 >gi|229463110|gb|ACQ66107.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Salvia miltiorrhiza] Length = 724 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A + + GDGA GQ YE+ N A Sbjct: 182 SAHDAFGAGHS--STSISAGLGMAVGRDLLHKNNHVISVIGDGAMTAGQAYEALNNAGFL 239 Query: 208 NLNVIYVIENNQ 219 + N+I V+ +N+ Sbjct: 240 DSNLIIVLNDNK 251 >gi|227551530|ref|ZP_03981579.1| possible 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium TX1330] gi|257887370|ref|ZP_05667023.1| transketolase [Enterococcus faecium 1,141,733] gi|257895862|ref|ZP_05675515.1| transketolase [Enterococcus faecium Com12] gi|257898488|ref|ZP_05678141.1| transketolase [Enterococcus faecium Com15] gi|293377101|ref|ZP_06623311.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium PC4.1] gi|227179312|gb|EEI60284.1| possible 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium TX1330] gi|257823424|gb|EEV50356.1| transketolase [Enterococcus faecium 1,141,733] gi|257832427|gb|EEV58848.1| transketolase [Enterococcus faecium Com12] gi|257836400|gb|EEV61474.1| transketolase [Enterococcus faecium Com15] gi|292644317|gb|EFF62417.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Enterococcus faecium PC4.1] Length = 587 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 7/99 (7%) Query: 129 LTGRQGGISKG-----KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 LTGR+ G KG G S S + F GH +SL TG+A + ++ Sbjct: 85 LTGRKNGFEKGHYHEVSGYSNQHESEHDYFTVGH--TSTSISLATGLAKSRDLKKESGNV 142 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V GDG+ + G +E N N+I ++ +N+ ++ Sbjct: 143 VAFIGDGSLSGGLAFEGLNNGGALQTNLIVLVNDNEMSI 181 >gi|158295746|ref|XP_001688856.1| AGAP006366-PA [Anopheles gambiae str. PEST] gi|157016184|gb|EDO63862.1| AGAP006366-PA [Anopheles gambiae str. PEST] Length = 1059 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/171 (20%), Positives = 72/171 (42%), Gaps = 4/171 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG V+E+ +++ L + I+++ NNQ T + + + Sbjct: 405 MSILLHGDAAFCGQGVVFETMHLSDLPDYTTHGTIHIVVNNQIGFTTDPRHSRSSPYCTD 464 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+G D AV A + +II++++YR GH+ D + Sbjct: 465 VARVVNAPIFHVNGDDPEAVMHVCKVAAEWRATFHKDVIIDIVSYRRNGHNEIDEPMFTQ 524 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++R ++ +L+ + ++K ++ KI + E A+ Sbjct: 525 PLMYKKIRGTKPALDIYANQLITEGVVTAEEVKSVKDKYEKICEEAFEQAK 575 >gi|170726190|ref|YP_001760216.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella woodyi ATCC 51908] gi|169811537|gb|ACA86121.1| 2-oxoglutarate dehydrogenase, E1 subunit [Shewanella woodyi ATCC 51908] Length = 940 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+FN++ V I ++ NNQ TS + T + + Sbjct: 358 LPITIHGDSAITGQGIVQETFNMSQTRGFKVGGSIRIVINNQVGFTTSNTEDVRSTEYCT 417 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV AV Y K ++IE++ YR GH+ +D Sbjct: 418 DIAKMVQAPIFHVNADDPEAVAFVSQLAVDYRNEFKRDVVIELVCYRRHGHNEAD 472 >gi|109898119|ref|YP_661374.1| alpha-ketoglutarate decarboxylase [Pseudoalteromonas atlantica T6c] gi|109700400|gb|ABG40320.1| 2-oxoglutarate dehydrogenase E1 component [Pseudoalteromonas atlantica T6c] Length = 940 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+FN++ V + ++ NNQ TS + + T + + Sbjct: 357 LPITIHGDSAIAGQGVVQETFNMSQTRGFKVGGTVRIVINNQVGFTTSNTEDTRSTQYCT 416 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 417 DIAKMVQAPIFHVNSDDPEAVMFVTKLALDYRNKFKRDVVIDLVCYRRHGHNEAD 471 >gi|266621601|ref|ZP_06114536.1| transketolase [Clostridium hathewayi DSM 13479] gi|288866699|gb|EFC98997.1| transketolase [Clostridium hathewayi DSM 13479] Length = 287 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 30/137 (21%), Positives = 59/137 (43%), Gaps = 5/137 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S G+A A + + D GDG +GQ++E+ A+ + LN +I +++ Sbjct: 115 GPLGQGLSAAVGMALAARTMKKDFFVYCMLGDGEIEEGQIWEAAMTASKYRLNRLIAILD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--- 273 +N+ M + + + SF +++G I + +D K Sbjct: 175 HNKVQMSGTNEEIMPLGDIKDKFDSFGWKTYKINGHSISEIIEILDHVTQESHEEKSKQD 234 Query: 274 -PIIIEMLTYRYRGHSM 289 P++I T + +G S Sbjct: 235 KPVMIIANTVKGKGVSF 251 >gi|206559881|ref|YP_002230645.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia cenocepacia J2315] gi|198035922|emb|CAR51814.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia cenocepacia J2315] Length = 954 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D+ + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDEDGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV + A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAIQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|122920199|pdb|2FN3|A Chain A, High Resolution Structure Of S26a Mutant Of Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With Thiamine Thiazolone Diphosphate Length = 528 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 45/160 (28%) Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 ++M + + ++ G +G + G+ A R+ + GDG+AN ++I Sbjct: 387 LNMRNPGSYYFCAAGGLGFALPAAIGVQLAEPERQ----VIAVIGDGSAN-------YSI 435 Query: 204 AALW-----NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA-- 256 +ALW N+ I+VI NN GT A F+ + N+PG+ V G+D RA Sbjct: 436 SALWTAAQYNIPTIFVIMNN----GTY----GALRWFAGVLEAENVPGLDVPGIDFRALA 487 Query: 257 ---------------VKATMDKAVAYCRAHKGPIIIEMLT 281 +K ++ +A+ + KGP++IE+ T Sbjct: 488 KGYGVQALKADNLEQLKGSLQEAL----SAKGPVLIEVST 523 >gi|110802844|ref|YP_699102.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens SM101] gi|118595505|sp|Q0SS05|DXS_CLOPS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|110683345|gb|ABG86715.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens SM101] Length = 619 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 41/190 (21%), Positives = 72/190 (37%), Gaps = 53/190 (27%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +S G+A A K D + GDGA G E+ N N+I Sbjct: 112 FATGHS--STSLSSAAGMARAQKILGKDNKVIAVIGDGALTGGMALEALNDIGYRKDNLI 169 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFN----------------------------- 243 ++ +NQ ++ +V + N + GV +N Sbjct: 170 IILNDNQMSICKNVGGLATYLNKLRMGVGYNKLKSDIGSTLDTTSLGKRVKNSLSKLKDG 229 Query: 244 -----IPGMQ-----------VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +P M VDG +IR +++ ++ ++ KGP+II +T + +G+ Sbjct: 230 IKKIVVPSMYFEDIGLKYFGIVDGHNIRE----LNEVLSIAKSIKGPVIIHTVTKKGKGY 285 Query: 288 SMSD--PANY 295 +++ P Y Sbjct: 286 ELAEKNPNKY 295 >gi|332295275|ref|YP_004437198.1| Transketolase [Thermodesulfobium narugense DSM 14796] gi|332178378|gb|AEE14067.1| Transketolase [Thermodesulfobium narugense DSM 14796] Length = 293 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 2/111 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A + K S V GDG +GQV+E+ A+ + L N++ +++ Sbjct: 124 GSLGQGLSVGVGMALSAKILESGYRVFVLLGDGECQEGQVWEAAMSASHFKLTNIVAIVD 183 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 N+ + + +F ++VDG D + ++ A++Y Sbjct: 184 RNRLQIDGCTEDVMGVDPLGAKWKAFGWTVIEVDGHDFLELIPALE-AISY 233 >gi|307178145|gb|EFN66953.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial [Camponotus floridanus] Length = 925 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 33/173 (19%), Positives = 74/173 (42%), Gaps = 4/173 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG V+E+ +++ L + I+++ NNQ T + + + Sbjct: 272 MSILLHGDAAFCGQGIVFETMHLSDLPDYTTHGTIHIVVNNQIGFTTDPRHSRSSPYCTD 331 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV A + ++I++++YR GH+ D + Sbjct: 332 VARVVNAPIFHVNSDDPEAVMHVCKVAAEWRATFHKDVVIDLVSYRRNGHNEIDEPMFTQ 391 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 ++R+ +++ L+ + S ++K+++ KI + A+ + Sbjct: 392 PLMYRKIRNTPPALDKYANTLIADSVVSPEEVKDVKDKYEKICEEAYNNAKQE 444 >gi|254992569|ref|ZP_05274759.1| pyruvate dehydrogenase (E1 alpha subunit) [Listeria monocytogenes FSL J2-064] Length = 181 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 10/136 (7%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ R ++++ L G +G F GQEA + +L + D ++ YR+ ++ Sbjct: 56 MVWTRVLDQRSISLNRQGRLG-FYAPTAGQEASQLASHYALEKHDYILPGYRDVPQLIWH 114 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ +K G G + F I+GAQ+ G+A K R+ Sbjct: 115 GLPLTKAFLFSRGHFVG---------NQFPEDLNVLSPQIIIGAQIVQAAGVALGLKKRK 165 Query: 179 SDKICVVCFGDGAANQ 194 D + + GDG ++Q Sbjct: 166 KDAVVITYTGDGGSSQ 181 >gi|122920216|pdb|2FWN|A Chain A, Phosphorylation Of An Active Site Serine In A Thdp- Dependent Enzyme By Phosphonate Inactivation Length = 528 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 45/160 (28%) Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 ++M + + ++ G +G + G+ A R+ + GDG+AN ++I Sbjct: 387 LNMRNPGSYYFCAAGGLGFALPAAIGVQLAEPERQ----VIAVIGDGSAN-------YSI 435 Query: 204 AALW-----NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA-- 256 +ALW N+ I+VI NN GT A F+ + N+PG+ V G+D RA Sbjct: 436 SALWTAAQYNIPTIFVIMNN----GTY----GALRWFAGVLEAENVPGLDVPGIDFRALA 487 Query: 257 ---------------VKATMDKAVAYCRAHKGPIIIEMLT 281 +K ++ +A+ + KGP++IE+ T Sbjct: 488 KGYGVQALKADNLEQLKGSLQEAL----SAKGPVLIEVST 523 >gi|172060482|ref|YP_001808134.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia ambifaria MC40-6] gi|171992999|gb|ACB63918.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia ambifaria MC40-6] Length = 954 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D+ + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDEDGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV + A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAIQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|78066119|ref|YP_368888.1| alpha-ketoglutarate decarboxylase [Burkholderia sp. 383] gi|77966864|gb|ABB08244.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia sp. 383] Length = 954 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D+ + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDEDGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV + A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAIQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|115351443|ref|YP_773282.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia ambifaria AMMD] gi|170700014|ref|ZP_02891039.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia ambifaria IOP40-10] gi|115281431|gb|ABI86948.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia ambifaria AMMD] gi|170135073|gb|EDT03376.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia ambifaria IOP40-10] Length = 954 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D+ + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDEDGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV + A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAIQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|107022581|ref|YP_620908.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia cenocepacia AU 1054] gi|116689530|ref|YP_835153.1| alpha-ketoglutarate decarboxylase [Burkholderia cenocepacia HI2424] gi|170732834|ref|YP_001764781.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia cenocepacia MC0-3] gi|254245578|ref|ZP_04938899.1| Dehydrogenase, E1 component [Burkholderia cenocepacia PC184] gi|105892770|gb|ABF75935.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia cenocepacia AU 1054] gi|116647619|gb|ABK08260.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia cenocepacia HI2424] gi|124870354|gb|EAY62070.1| Dehydrogenase, E1 component [Burkholderia cenocepacia PC184] gi|169816076|gb|ACA90659.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia cenocepacia MC0-3] Length = 954 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D+ + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDEDGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV + A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAIQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|88191849|pdb|1YNO|A Chain A, High Resolution Structure Of Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With Thiamine Thiazolone Diphosphate Length = 527 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 45/160 (28%) Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 ++M + + ++ G +G + G+ A R+ + GDG+AN ++I Sbjct: 386 LNMRNPGSYYFCAAGGLGFALPAAIGVQLAEPERQ----VIAVIGDGSAN-------YSI 434 Query: 204 AALW-----NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA-- 256 +ALW N+ I+VI NN GT A F+ + N+PG+ V G+D RA Sbjct: 435 SALWTAAQYNIPTIFVIMNN----GTY----GALRWFAGVLEAENVPGLDVPGIDFRALA 486 Query: 257 ---------------VKATMDKAVAYCRAHKGPIIIEMLT 281 +K ++ +A+ + KGP++IE+ T Sbjct: 487 KGYGVQALKADNLEQLKGSLQEAL----SAKGPVLIEVST 522 >gi|291278506|ref|YP_003495341.1| hypothetical protein DEFDS_0073 [Deferribacter desulfuricans SSM1] gi|290753208|dbj|BAI79585.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 632 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 19/182 (10%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S G+A A K+ ++ V CF GDG +GQV E+ A +NL N+I + Sbjct: 120 GNLGQGLSAACGMALAAKHLGAE-YGVYCFMGDGEQQKGQVSEARRFAVKYNLDNLIAFV 178 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + ++S Q N ++ +++DG +I+ + + +A R P+ Sbjct: 179 DYNKLQISGNISEVMPQ-NIKDEYIASGWAVLEIDGHNIKEIADAIYQAKKIAR----PV 233 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINE-----------MRSNHDPIEQVRKRLLHNKWA 324 +I T +G S + + +NE + ++ + +++RK+ + ++ A Sbjct: 234 LILAKTVMGKGVSFMENKEVYHGKPLNEEQLDAALKELGLENDLEKYKEMRKQFVFDESA 293 Query: 325 SE 326 E Sbjct: 294 HE 295 >gi|229597857|pdb|3FZN|A Chain A, Intermediate Analogue In Benzoylformate Decarboxylase gi|229597858|pdb|3FZN|B Chain B, Intermediate Analogue In Benzoylformate Decarboxylase gi|229597859|pdb|3FZN|C Chain C, Intermediate Analogue In Benzoylformate Decarboxylase gi|229597860|pdb|3FZN|D Chain D, Intermediate Analogue In Benzoylformate Decarboxylase Length = 534 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 45/160 (28%) Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 ++M + + ++ G +G + G+ A R+ + GDG+AN ++I Sbjct: 387 LNMRNPGSYYFCAAGGLGFALPAAIGVQLAEPERQ----VIAVIGDGSAN-------YSI 435 Query: 204 AALW-----NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA-- 256 +ALW N+ I+VI NN GT A F+ + N+PG+ V G+D RA Sbjct: 436 SALWTAAQYNIPTIFVIMNN----GTY----GALRWFAGVLEAENVPGLDVPGIDFRALA 487 Query: 257 ---------------VKATMDKAVAYCRAHKGPIIIEMLT 281 +K ++ +A+ + KGP++IE+ T Sbjct: 488 KGYGVQALKADNLEQLKGSLQEAL----SAKGPVLIEVST 523 >gi|187477747|ref|YP_785771.1| transketolase N-terminal part [Bordetella avium 197N] gi|115422333|emb|CAJ48857.1| putative transketolase N-terminal part [Bordetella avium 197N] Length = 270 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 28/179 (15%) Query: 149 TKNGFYG----GHGIVGAQVSLGT---------GIAFANKYRRSDKICVVCFGDGAANQG 195 T+NG Y H + G ++S G+ G A A K R+ DG ++G Sbjct: 91 TENGSYFTSHVNHRLPGVELSTGSLGHALGVACGSALACKRRQMKNTVFAILSDGELDEG 150 Query: 196 QVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 +E+ AA L N++ VI+ N+ SV + + +FN +VDG + Sbjct: 151 SNWEAILFAAHNRLDNLVAVIDFNKIQSFGSVKDVMNLEPLADKFRAFNWEVEEVDGHSL 210 Query: 255 RAVKATMDK-----------AVAYCRAHKGPIIIE-MLTYRYRGHSMSDPANYRTREEI 301 A++AT+ +A+ KG +E L + YR S SD R REE+ Sbjct: 211 EALQATLRNFKSSRSGRPKCLIAHTIKGKGVSFMENELVWHYR--SPSDQEVQRAREEL 267 >gi|3915757|sp|P20906|MDLC_PSEPU RecName: Full=Benzoylformate decarboxylase; Short=BFD; Short=BFDC gi|28948619|pdb|1MCZ|A Chain A, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|28948620|pdb|1MCZ|B Chain B, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|28948621|pdb|1MCZ|C Chain C, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|28948622|pdb|1MCZ|D Chain D, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|28948623|pdb|1MCZ|E Chain E, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|28948624|pdb|1MCZ|F Chain F, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|28948625|pdb|1MCZ|G Chain G, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|28948626|pdb|1MCZ|H Chain H, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|28948627|pdb|1MCZ|I Chain I, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|28948628|pdb|1MCZ|J Chain J, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|28948629|pdb|1MCZ|K Chain K, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|28948630|pdb|1MCZ|L Chain L, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|28948631|pdb|1MCZ|M Chain M, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|28948632|pdb|1MCZ|N Chain N, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|28948633|pdb|1MCZ|O Chain O, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|28948634|pdb|1MCZ|P Chain P, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate gi|157830273|pdb|1BFD|A Chain A, Benzoylformate Decarboxylase From Pseudomonas Putida gi|222143254|pdb|3FSJ|X Chain X, Crystal Structure Of Benzoylformate Decarboxylase In Complex With The Inhibitor Mbp gi|3093419|gb|AAC15502.1| benzoylformate decarboxylase [Pseudomonas putida] Length = 528 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 45/160 (28%) Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 ++M + + ++ G +G + G+ A R+ + GDG+AN ++I Sbjct: 387 LNMRNPGSYYFCAAGGLGFALPAAIGVQLAEPERQ----VIAVIGDGSAN-------YSI 435 Query: 204 AALW-----NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA-- 256 +ALW N+ I+VI NN GT A F+ + N+PG+ V G+D RA Sbjct: 436 SALWTAAQYNIPTIFVIMNN----GTY----GALRWFAGVLEAENVPGLDVPGIDFRALA 487 Query: 257 ---------------VKATMDKAVAYCRAHKGPIIIEMLT 281 +K ++ +A+ + KGP++IE+ T Sbjct: 488 KGYGVQALKADNLEQLKGSLQEAL----SAKGPVLIEVST 523 >gi|315634195|ref|ZP_07889484.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter segnis ATCC 33393] gi|315477445|gb|EFU68188.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter segnis ATCC 33393] Length = 618 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ +S + KGG +H F + + GH +S G GIA A + + + Sbjct: 84 LTGRRDQMSTIRQKGG-LHPFPWRGESEFDVLSVGHS--STSISAGLGIAIAAERENAGR 140 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + N++ ++ +N+ ++ +V Sbjct: 141 QTVCVIGDGAITAGMAFEALNHAGALHTNMLVILNDNEMSISENV 185 >gi|289579025|ref|YP_003477652.1| transketolase [Thermoanaerobacter italicus Ab9] gi|289528738|gb|ADD03090.1| Transketolase domain protein [Thermoanaerobacter italicus Ab9] Length = 273 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + V GDG +GQ++E+ A+ + L N+ +++ Sbjct: 115 GSLGQGLSAANGMALAGKLDKKGYRVYVILGDGELQEGQIWEAAMTASHYKLDNLTAILD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + + + +F +++DG D + DKA+ +A KG P Sbjct: 175 FNGLQIDGPNREVKNIEPVADKFKAFGWHVIEIDGHDFDQI----DKAIEEAKATKGKPT 230 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 231 LIIAHTIKGKGVSF 244 >gi|300707728|ref|XP_002996061.1| hypothetical protein NCER_100905 [Nosema ceranae BRL01] gi|239605324|gb|EEQ82390.1| hypothetical protein NCER_100905 [Nosema ceranae BRL01] Length = 619 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 14/129 (10%) Query: 147 FSTKNGFYGGHG---IVGAQVS---LGTGIAFANKYRRS------DKICVVCFGDGAANQ 194 F N GHG G +V+ LG G+A + Y S D FGDG + Sbjct: 86 FRQVNSVTPGHGEKKCKGVEVTTGPLGQGVANSVGYAISLLKLGIDNHVYCVFGDGCYME 145 Query: 195 GQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 G ESF+IAA NL N+ ++ + N+ + S S S N R S N ++V+G + Sbjct: 146 GISQESFSIAANLNLNNITFIYDFNKITIDGSTS-LSMNENVVMRFESLNFHVIEVEGEN 204 Query: 254 IRAVKATMD 262 I ++ +D Sbjct: 205 IDEIRNALD 213 >gi|167570120|ref|ZP_02362994.1| alpha-ketoglutarate decarboxylase [Burkholderia oklahomensis C6786] Length = 954 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDADGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P + V+G D AV A+ Y ++I+ Sbjct: 399 IGFTTSDPRDSRSTLYCTDVVKMIEAPVLHVNGDDPEAVVLATQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|153853045|ref|ZP_01994454.1| hypothetical protein DORLON_00439 [Dorea longicatena DSM 13814] gi|149753831|gb|EDM63762.1| hypothetical protein DORLON_00439 [Dorea longicatena DSM 13814] Length = 620 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G K G M F + + F GH +S G G A ++ D Sbjct: 79 LTGRKDGFDDLRKYGGMSGFPKRKESACDAFDTGHS--STSISAGLGYVCARDLQKEDYS 136 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + GDG+ G YE+ N A+ N I V+ +N ++ +V Sbjct: 137 VISVIGDGSLTGGMAYEALNNASRLKKNFIIVLNDNHMSISENV 180 >gi|77360588|ref|YP_340163.1| alpha-ketoglutarate decarboxylase [Pseudoalteromonas haloplanktis TAC125] gi|76875499|emb|CAI86720.1| 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex, thiamin-binding [Pseudoalteromonas haloplanktis TAC125] Length = 939 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 58/233 (24%), Positives = 93/233 (39%), Gaps = 40/233 (17%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILA--CGVDASKIMAELTGRQGGISKGKGGSM 144 GQ+ ++GM A+R ++L G + S++ E G+ Sbjct: 253 GQKEAVIGM------------AHRGRLNVLVNVLGKNPSELFDEFAGKHKDTLSSGDVKY 300 Query: 145 HM-----FSTKNG-------FYGGHGIVGAQVSLGTGIAFANKYRRSDKI---CVVCFGD 189 HM F+TK G F H + V +G+ A ++ S I + GD Sbjct: 301 HMGYSSDFATKGGNVHMALAFNPSHLEIVNPVVMGSVRARLDRLGDSSGIKALPITIHGD 360 Query: 190 GA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS----VSRASAQTNFSKRGVS 241 A A QG V E+FN++ + I ++ NNQ TS V T+ +K S Sbjct: 361 SAIAGQGVVQETFNMSQTNAFSCGGSIRIVVNNQVGFTTSKQDDVRSTPYCTDIAKMVQS 420 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+ D AV A+ + K ++I+++ YR GH+ +D N Sbjct: 421 ---PIFHVNSDDPEAVAFVTQLALDFRNQFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|56965880|pdb|1PO7|A Chain A, High Resolution Structure Of E28a Mutant Benzoylformate Decarboxylase From Pseudomonas Putida gi|56965890|pdb|1Q6Z|A Chain A, High Resolution Structure Of E28a Mutant Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With Thiamin Thiazolone Diphosphate Length = 528 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 45/160 (28%) Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 ++M + + ++ G +G + G+ A R+ + GDG+AN ++I Sbjct: 387 LNMRNPGSYYFCAAGGLGFALPAAIGVQLAEPERQ----VIAVIGDGSAN-------YSI 435 Query: 204 AALW-----NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA-- 256 +ALW N+ I+VI NN GT A F+ + N+PG+ V G+D RA Sbjct: 436 SALWTAAQYNIPTIFVIMNN----GTY----GALRWFAGVLEAENVPGLDVPGIDFRALA 487 Query: 257 ---------------VKATMDKAVAYCRAHKGPIIIEMLT 281 +K ++ +A+ + KGP++IE+ T Sbjct: 488 KGYGVQALKADNLEQLKGSLQEAL----SAKGPVLIEVST 523 >gi|171317100|ref|ZP_02906303.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia ambifaria MEX-5] gi|171097734|gb|EDT42561.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia ambifaria MEX-5] Length = 954 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D+ + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDEDGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV + A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAIQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|158295752|ref|XP_316396.4| AGAP006366-PC [Anopheles gambiae str. PEST] gi|157016187|gb|EAA44209.4| AGAP006366-PC [Anopheles gambiae str. PEST] Length = 1019 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 35/171 (20%), Positives = 72/171 (42%), Gaps = 4/171 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG V+E+ +++ L + I+++ NNQ T + + + Sbjct: 410 MSILLHGDAAFCGQGVVFETMHLSDLPDYTTHGTIHIVVNNQIGFTTDPRHSRSSPYCTD 469 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+G D AV A + +II++++YR GH+ D + Sbjct: 470 VARVVNAPIFHVNGDDPEAVMHVCKVAAEWRATFHKDVIIDIVSYRRNGHNEIDEPMFTQ 529 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++R ++ +L+ + ++K ++ KI + E A+ Sbjct: 530 PLMYKKIRGTKPALDIYANQLITEGVVTAEEVKSVKDKYEKICEEAFEQAK 580 >gi|167562930|ref|ZP_02355846.1| alpha-ketoglutarate decarboxylase [Burkholderia oklahomensis EO147] Length = 954 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDADGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P + V+G D AV A+ Y ++I+ Sbjct: 399 IGFTTSDPRDSRSTLYCTDVVKMIEAPVLHVNGDDPEAVVLATQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|82701370|ref|YP_410936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosospira multiformis ATCC 25196] gi|118595593|sp|Q2YCH7|DXS_NITMU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|82409435|gb|ABB73544.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosospira multiformis ATCC 25196] Length = 614 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 7/117 (5%) Query: 129 LTGRQGGISK--GKGGSMHMFSTKNGFYGGHGIVGAQVSLGT--GIAFANKYRRSDKICV 184 LTGR+ G+SK +GG Y G + S+ G+A A+++ + V Sbjct: 82 LTGRREGMSKLRMRGGIAGFPRRDESEYDAFGTAHSSTSISAALGMAVASQWEGKKRSVV 141 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 GDGA + G +E+ N A + N++ ++ +N ++ V A N+ R +S Sbjct: 142 AVIGDGAMSAGMAFEALNNAGAMDTNLLVILNDNDMSISRPV---GALNNYLARLMS 195 >gi|15611396|ref|NP_223047.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori J99] gi|13124164|sp|Q9ZM94|DXS_HELPJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|4154849|gb|AAD05902.1| 1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE [Helicobacter pylori J99] Length = 618 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 18/194 (9%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IVGM + + I T+++ + H L G ++ + + G G Sbjct: 37 GGHLSSSLGAVELIVGMHALFDCQKNPFIFDTSHQAYAHKLLTGRFESFSTLRQFQGLSG 96 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH VS+G G+A A + +++ + + GDG+ + Sbjct: 97 FTKPSE-------SAYDYFIAGHS--STSVSIGVGVAKAFRLKQTLGMPIALLGDGSISA 147 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G YE+ N +I ++ +N+ ++ T + S + +G P Q + Sbjct: 148 GIFYEALNELGDRKYPMIMILNDNEMSISTPIGALSKALSQLMKG-----PFYQSFRSKV 202 Query: 255 RAVKATMDKAVAYC 268 + + +T+ ++V Y Sbjct: 203 KKILSTLPESVNYL 216 >gi|56965879|pdb|1PI3|A Chain A, E28q Mutant Benzoylformate Decarboxylase From Pseudomonas Putida Length = 528 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 45/160 (28%) Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 ++M + + ++ G +G + G+ A R+ + GDG+AN ++I Sbjct: 387 LNMRNPGSYYFCAAGGLGFALPAAIGVQLAEPERQ----VIAVIGDGSAN-------YSI 435 Query: 204 AALW-----NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA-- 256 +ALW N+ I+VI NN GT A F+ + N+PG+ V G+D RA Sbjct: 436 SALWTAAQYNIPTIFVIMNN----GTY----GALRWFAGVLEAENVPGLDVPGIDFRALA 487 Query: 257 ---------------VKATMDKAVAYCRAHKGPIIIEMLT 281 +K ++ +A+ + KGP++IE+ T Sbjct: 488 KGYGVQALKADNLEQLKGSLQEAL----SAKGPVLIEVST 523 >gi|94421690|gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis] Length = 711 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 28/130 (21%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH +G G G G +S G G+A A + Sbjct: 145 ILTGRRSRMHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGLGMAVARDLLGKNNNV 204 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY----------------AMGTSVS 227 + GDGA GQ YE+ N A + N+I ++ +N+ A+ ++++ Sbjct: 205 ISVIGDGAMTAGQAYEAMNNAGFLDANLIVILNDNKQVSLPTATLDGPATPVGALSSALA 264 Query: 228 RASAQTNFSK 237 + A T F K Sbjct: 265 KIQASTQFRK 274 >gi|257057618|ref|YP_003135450.1| transketolase [Saccharomonospora viridis DSM 43017] gi|256587490|gb|ACU98623.1| transketolase [Saccharomonospora viridis DSM 43017] Length = 614 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G + +G GIA A + R + V+C GDG +G ++E+F A L N+I + Sbjct: 119 GALGQGLGIGAGIALAGQRLDHRDFHVWVLC-GDGELAEGSMWEAFEHAGYERLHNLIAI 177 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 I+ N+ +++R +F +++DG D+ + A +A Sbjct: 178 IDVNRLGQRGPTRHGWDTAAYARRIGAFGWHTIEIDGHDVDQIDAAYAEA 227 >gi|73538308|ref|YP_298675.1| alpha-ketoglutarate decarboxylase [Ralstonia eutropha JMP134] gi|72121645|gb|AAZ63831.1| 2-oxoglutarate dehydrogenase E1 component [Ralstonia eutropha JMP134] Length = 944 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 13/137 (9%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD + + QG V E+ N++ ++V+ NNQ TS R A++ F Sbjct: 356 LPVEIHGDASISGQGIVMETMNLSGTRGHGTGGTVHVVVNNQVGFTTSDPR-DARSTFYC 414 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD---- 291 ++ I P + V+G D AV A AV Y ++IE++ +R GH D Sbjct: 415 TDIAKMIEAPVLHVNGDDPEAVVAATRLAVDYRMTFGKSVVIELMCFRRHGHQEQDTPAI 474 Query: 292 --PANYRTREEINEMRS 306 P YR+ E +R+ Sbjct: 475 TQPLMYRSIAEHPGVRA 491 >gi|317013792|gb|ADU81228.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori Gambia94/24] Length = 616 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 18/194 (9%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IVGM + + I T+++ + H L G ++ + + G G Sbjct: 35 GGHLSSSLGAVELIVGMHALFDCQKNPFIFDTSHQAYAHKLLTGRFESFSTLRQFQGLSG 94 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH VS+G G+A A + +++ + + GDG+ + Sbjct: 95 FTKPSE-------SAYDYFIAGHS--STSVSIGVGVAKAFRLKQTLGMPIALLGDGSISA 145 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G YE+ N +I ++ +N+ ++ T + S + +G P Q + Sbjct: 146 GIFYEALNELGDRKYPMIMILNDNEMSISTPIGALSKALSQLMKG-----PFYQSFRSKV 200 Query: 255 RAVKATMDKAVAYC 268 + + +T+ ++V Y Sbjct: 201 KKILSTLPESVNYL 214 >gi|152993632|ref|YP_001359353.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfurovum sp. NBC37-1] gi|151425493|dbj|BAF72996.1| 1-deoxy-D-xylulose 5-phosphate synthase [Sulfurovum sp. NBC37-1] Length = 608 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 48/181 (26%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 + GH +SL G A A + D+I V GDG+ + G VYE+ N V+ Sbjct: 102 YVAGHS--STSISLSVGAAKAIALKGEDRIPVAFIGDGSMSAGMVYEALNELGDRKYPVV 159 Query: 213 YVIENNQYAMGT---SVSRASAQT-------------------------NFSKR------ 238 ++ +N+ ++ ++S+ +QT +KR Sbjct: 160 IILNDNEMSIAKPIGAISKLLSQTMAGSFYQKFKGKVEKVLDHFPDGAAYMAKRFEESFK 219 Query: 239 ----GVSFNIPGMQ----VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 G+ F G++ VDG DI + TM+ A A+ + P+II T + +G+ ++ Sbjct: 220 LITPGILFEEMGIEYIGPVDGHDIETLIETMEVAKAFGK----PVIIHAQTTKGKGYELA 275 Query: 291 D 291 + Sbjct: 276 E 276 >gi|327194062|gb|EGE60936.1| putative transketolase protein [Rhizobium etli CNPAF512] Length = 550 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 10/125 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K ++S F DG ++G +E+ A + L N+I +++ Sbjct: 390 GSLGHGLGIAVGMALALKRKKSSSFVYNLFSDGELDEGSTWEAAMSAGSYKLDNLIGIVD 449 Query: 217 NNQ-YAMGTSVSRASAQTNFSKRGVSFNIPGM---QVDGMDIRAVKATMDKAVAYCRAHK 272 NQ A G S+ NF F G +VDG DI A+ D A Y A K Sbjct: 450 VNQMQADGPSI----GVLNFEPLAPKFEAFGWFVQRVDGNDIGALVEAFDAARHYADA-K 504 Query: 273 GPIII 277 III Sbjct: 505 PRIII 509 >gi|114329068|ref|YP_746225.1| 1-deoxy-D-xylulose-5-phosphate synthase [Granulibacter bethesdensis CGDNIH1] gi|114317242|gb|ABI63302.1| 1-deoxy-D-xylulose 5-phosphate synthase [Granulibacter bethesdensis CGDNIH1] Length = 669 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 15/116 (12%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRS--- 179 LTGR+ I + GG + F+ + + F GH +S G G+A A RR+ Sbjct: 92 LTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAGHS--STSISAGLGMAVARDLRRAAGE 149 Query: 180 ----DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + + GDGA + G VYE+ N A ++ ++ +N ++ V SA Sbjct: 150 VGAGPEHVIAVIGDGAMSAGMVYEAMNNAGSLKSRLVVILNDNDMSIAPPVGAMSA 205 >gi|126175163|ref|YP_001051312.1| transketolase, central region [Shewanella baltica OS155] gi|125998368|gb|ABN62443.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS155] Length = 591 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL-WNLNVIYVIENNQ 219 G +SL TGI+ A K + S V GDG+ +G +E+ N ++ + +I V+ +N+ Sbjct: 120 GTSISLATGISAALKTKGSSDFTVSVIGDGSLVEGMAFEALNFGSVDKDAKLILVVNDNE 179 Query: 220 YAMGTSV 226 A+ SV Sbjct: 180 MAIAPSV 186 >gi|311899285|dbj|BAJ31693.1| putative 2-oxoglutarate dehydrogenase E1 component [Kitasatospora setae KM-6054] Length = 1231 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 8/120 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A A QG V E+ N++ L ++V+ NNQ +G + + AS++++ Sbjct: 647 LPIQIHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVVNNQ--VGFTAAPASSRSSMYC 704 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 V+ I P V+G D AV A + + ++I+++ YR RGH+ +D ++ Sbjct: 705 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQQFHKDVVIDLICYRRRGHNEADNPSF 764 >gi|217076602|ref|YP_002334318.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermosipho africanus TCF52B] gi|217036455|gb|ACJ74977.1| dxs 1-deoxy-D-xylulose-5-phosphate synthase [Thermosipho africanus TCF52B] Length = 613 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 44/116 (37%), Gaps = 15/116 (12%) Query: 130 TGRQGGISKGKGGSMHMFSTKNGFYG---------------GHGIVGAQVSLGTGIAFAN 174 TG Q K G +FST F G G G VG +S GI A Sbjct: 65 TGHQTYTHKLLTGRWDLFSTIRKFNGLSGYTNIFESYVDRFGAGHVGTAISAALGIEQAL 124 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 + S VV GDGA GQ E+ N N + +I NN ++ +V S Sbjct: 125 RLNNSSANVVVVIGDGALTSGQSLEALNQIKTLNSKIKIIINNNSMSISKNVGALS 180 >gi|162453946|ref|YP_001616313.1| 2-oxoglutarate dehydrogenase E1 component [Sorangium cellulosum 'So ce 56'] gi|161164528|emb|CAN95833.1| Oxoglutarate dehydrogenase (succinyl-transferring) [Sorangium cellulosum 'So ce 56'] Length = 977 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 4/122 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A QG V E+ N+ L ++VI NNQ T + Sbjct: 378 RRRVMPLLIHGDAAFIGQGVVAETLNMMNLPGYTTSGTVHVIVNNQVGFTTDPMEGRSTR 437 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S +P V+G D AV A+ Y +II+M YR GH+ D Sbjct: 438 YASDITRMLKVPVFHVNGEDPEAVAHVAQLAIDYRTRFGSDVIIDMYCYRRYGHNEGDEP 497 Query: 294 NY 295 Y Sbjct: 498 RY 499 >gi|311747411|ref|ZP_07721196.1| transketolase, N- subunit [Algoriphagus sp. PR1] gi|126574695|gb|EAZ79082.1| transketolase, N- subunit [Algoriphagus sp. PR1] Length = 283 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 4/125 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G A A K D+ GDG +GQ++E+ AA W + N+I I+ Sbjct: 120 GSLGQGLSVAIGAAQAKKIDGDDRFVYALMGDGEQEEGQIWEAAMYAAHWKVDNLIATID 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD-GMDIRAVKATMDKAVAYCRAHKGPI 275 N+ + + + + SF + + G D+++V ++KA + A KG Sbjct: 180 LNRQQIDGPTEKIMDLIDLRAKYESFGWTVIDTENGNDMQSVVEGLEKAKSL--AGKGKP 237 Query: 276 IIEML 280 ++ +L Sbjct: 238 VLNLL 242 >gi|89257047|ref|YP_514409.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. holarctica LVS] gi|167009433|ref|ZP_02274364.1| alpha-ketoglutarate decarboxylase [Francisella tularensis subsp. holarctica FSC200] gi|254368288|ref|ZP_04984307.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. holarctica 257] gi|89144878|emb|CAJ80223.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. holarctica LVS] gi|134254097|gb|EBA53191.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. holarctica 257] Length = 937 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 10/121 (8%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFN---IAALWNLNVIYVIENNQYAMGTS----VSRAS 230 S + ++ GD A QG V E+F I A I+++ NNQ TS V+R+S Sbjct: 347 SKVLPILIHGDSAFCGQGVVMETFGFSLIEAYGTGGTIHLVVNNQVGFTTSSAFGVNRSS 406 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + V + P V+G D AV D A+ Y ++I+++ YR GH+ + Sbjct: 407 NYSTDVAKMV--DAPIFHVNGDDPEAVLKVTDIALEYRMKFNKDVVIDLVCYRRNGHNET 464 Query: 291 D 291 D Sbjct: 465 D 465 >gi|238020599|ref|ZP_04601025.1| hypothetical protein GCWU000324_00485 [Kingella oralis ATCC 51147] gi|237867579|gb|EEP68585.1| hypothetical protein GCWU000324_00485 [Kingella oralis ATCC 51147] Length = 641 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 15/108 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K S Sbjct: 83 LTGR-----KDRMDTMRQYQGLAGFPKRCESEYDVFGVGHSSTSIGAALGMAVADKLHGS 137 Query: 180 DKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSV 226 D V GDGA GQ +E+ N A + ++N++ ++ +N+ ++ +V Sbjct: 138 DARSVAIIGDGAMTAGQAFEALNNAGDMSDVNLLVILNDNEMSISPNV 185 >gi|163840137|ref|YP_001624542.1| alpha-ketoglutarate decarboxylase [Renibacterium salmoninarum ATCC 33209] gi|162953613|gb|ABY23128.1| 2-oxoglutarate dehydrogenase E1 component [Renibacterium salmoninarum ATCC 33209] Length = 1303 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 10/126 (7%) Query: 180 DKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF 235 D + V+ GD A A QG V E+ ++ L ++V+ NNQ TS S + + Sbjct: 712 DVLPVLIHGDAAFAGQGVVAETLQLSQLRGYRTGGTVHVVINNQVGFTTSPSSSRSSVYS 771 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SM 289 + P V+G D AV A Y + I+I+++ YR RGH SM Sbjct: 772 TDVAKMIQAPIFHVNGDDPEAVVRVAQLAFKYRQKFAADIVIDLVCYRRRGHNEGDDPSM 831 Query: 290 SDPANY 295 + P Y Sbjct: 832 TQPMMY 837 >gi|152980216|ref|YP_001353202.1| 2-oxoglutarate dehydrogenase E1 component [Janthinobacterium sp. Marseille] gi|151280293|gb|ABR88703.1| 2-oxoglutarate dehydrogenase E1 component [Janthinobacterium sp. Marseille] Length = 952 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + ++ GD A A QG + E+ N+A +++I NNQ TS R S T + + Sbjct: 355 LPILIHGDAAFAGQGVIMETLNLAQTRGYGTGGTVHIIINNQIGFTTSDPRDSRSTLYCT 414 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P + V+G D AV A+ Y + I+++++ YR GH+ D Sbjct: 415 DVSKMIEAPVIHVNGDDPEAVVFAAQLALDYRLEFRKDIVVDIVCYRKLGHNEQD 469 >gi|302815172|ref|XP_002989268.1| hypothetical protein SELMODRAFT_427859 [Selaginella moellendorffii] gi|300143011|gb|EFJ09706.1| hypothetical protein SELMODRAFT_427859 [Selaginella moellendorffii] Length = 728 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH +G G G G +S G G+A A + Sbjct: 160 ILTGRRSRMHTLRQTDGICGFTKRSESEYDPFGAGHSSTTISAGLGMAVARDLQGKKNNV 219 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA GQ YE+ N A + N+I ++ +N+ Sbjct: 220 IAVIGDGAMTAGQAYEAMNNAGYLDTNLIVILNDNK 255 >gi|11691594|emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase [Catharanthus roseus] Length = 716 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH +G G G G +S G G+A A + Sbjct: 150 ILTGRRSKMHTIRQTSGLAGFPKRDESIYDAFGAGHSSTSISAGLGMAVARDILGKNNNV 209 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA GQ YE+ N A + N+I V+ +N+ Sbjct: 210 ISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLNDNK 245 >gi|302793999|ref|XP_002978764.1| hypothetical protein SELMODRAFT_268187 [Selaginella moellendorffii] gi|300153573|gb|EFJ20211.1| hypothetical protein SELMODRAFT_268187 [Selaginella moellendorffii] Length = 636 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH NG G G G +S G G+A A + Sbjct: 68 ILTGRRSRMHTMRQTNGLSGFTKRSESEYDSFGAGHSSTSISAGLGMAVARDLMGNKNHV 127 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA GQ YE+ N A + N+I ++ +N+ Sbjct: 128 ISVIGDGAMTAGQAYEAMNNAGYLDSNMIVILNDNK 163 >gi|238754212|ref|ZP_04615569.1| 1-deoxy-D-xylulose-5-phosphate synthase [Yersinia ruckeri ATCC 29473] gi|238707459|gb|EEP99819.1| 1-deoxy-D-xylulose-5-phosphate synthase [Yersinia ruckeri ATCC 29473] Length = 619 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 60/219 (27%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ I+ + KGG +H F ++ GH LG +A + + Sbjct: 88 LTGRRDKIATIRQKGG-LHPFPWRDESEFDVLSVGHSSTSISAGLGMAVAAEREGKGRRT 146 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS-------------- 227 +CV+ GDGA G +E+ N A N +++ V+ +N+ ++ +V Sbjct: 147 VCVI--GDGAITAGMAFEAMNHAGDINPDMLVVLNDNEMSISENVGALNNHLAQLLSGKL 204 Query: 228 ----RASAQTNFS---------KRG----------------VSFNIPGMQVDGMDIRAVK 258 R + FS KR + FN G VDG D++A+ Sbjct: 205 YSTLREGGKKAFSGLPPIKELLKRTEEHLKGMVVPGTLFEELGFNYIG-PVDGHDVQALT 263 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 T+ R+ KGP ++ ++T + +G++ + DP + Sbjct: 264 QTLKN----MRSLKGPQLLHIMTKKGKGYAPAEKDPIGW 298 >gi|222530028|ref|YP_002573910.1| transketolase domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222456875|gb|ACM61137.1| Transketolase domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 282 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 9/164 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A A K + V GDG +GQ++E+ AA + L N+ ++ Sbjct: 118 GSLGQGLSVANGMALAAKLDGKNYRVYVLLGDGEIQEGQIWEAAMTAAHYKLDNLTAFLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK-GPI 275 +N + ++ + ++ +F +++DG D + +KAV + K P Sbjct: 178 HNGLQIDGKITEVMSPEPVDEKFKAFGWHVIKIDGHDFNQI----EKAVNEAKTIKEKPT 233 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRL 318 II T + +G S M + A + E +E+++K+L Sbjct: 234 IIIAETVKGKGVSFMENEAGWHGTAPNKEQAQK--ALEELQKQL 275 >gi|323692718|ref|ZP_08106947.1| transketolase domain-containing protein [Clostridium symbiosum WAL-14673] gi|323503272|gb|EGB19105.1| transketolase domain-containing protein [Clostridium symbiosum WAL-14673] Length = 284 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 17/168 (10%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S G+A+ K + + GDG +GQV+E AA L N+I ++ Sbjct: 119 GSLGQGASTAAGVAYGMKLDGRENKVFLILGDGEIQEGQVWEMALFAAQQKLSNLIAFVD 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + + + +F V+G D+ ++ ++KA + I+ Sbjct: 179 YNHVQLDGYTDDICSLGDIKGKFEAFGWFAQDVNGHDVNEIQGAIEKAKSQ-NVRPSMIV 237 Query: 277 IEMLTYRYRGHSMSDPAN-----------YRTREEINEMRSNHDPIEQ 313 +E +GH S+ A + +E + EM+S+++ IE+ Sbjct: 238 LE----TEKGHGWSEIAGGINGHCPAVSPEQLKEALAEMQSDYEKIEE 281 >gi|323498615|ref|ZP_08103607.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio sinaloensis DSM 21326] gi|323316313|gb|EGA69332.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio sinaloensis DSM 21326] Length = 941 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS + T Sbjct: 350 STVLPITIHGDSAIAGQGVVAETFNMSQARGFQVGGTVRIVVNNQVGFTTSNPNDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|304410004|ref|ZP_07391623.1| Transketolase central region [Shewanella baltica OS183] gi|307302283|ref|ZP_07582041.1| Transketolase central region [Shewanella baltica BA175] gi|304351413|gb|EFM15812.1| Transketolase central region [Shewanella baltica OS183] gi|306914321|gb|EFN44742.1| Transketolase central region [Shewanella baltica BA175] Length = 591 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL-WNLNVIYVIENNQ 219 G +SL TGI+ A K + S V GDG+ +G +E+ N ++ + +I V+ +N+ Sbjct: 120 GTSISLATGISAALKTKGSSDFTVSVIGDGSLVEGMAFEALNFGSVDKDAKLILVVNDNE 179 Query: 220 YAMGTSV 226 A+ SV Sbjct: 180 MAIAPSV 186 >gi|218515173|ref|ZP_03512013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium etli 8C-3] Length = 342 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 34/68 (50%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A ++D+ + GDGA + G YE+ N A + +I ++ +N ++ Sbjct: 126 ISAGLGMAIAADLDKNDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIA 185 Query: 224 TSVSRASA 231 SA Sbjct: 186 PPTGAMSA 193 >gi|195998345|ref|XP_002109041.1| hypothetical protein TRIADDRAFT_19360 [Trichoplax adhaerens] gi|190589817|gb|EDV29839.1| hypothetical protein TRIADDRAFT_19360 [Trichoplax adhaerens] Length = 814 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 5/117 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 +C+ GD + A QG + E+ ++ + + I++I NNQ T R + S Sbjct: 220 MCLQVHGDASFAGQGIIPETLMLSEVPHFRTGGSIHLIVNNQIGFTTEPERGRSSLYSSD 279 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 G + P + V+G + + A+ Y + III+++ +R GH+ M +PA Sbjct: 280 VGKIIDCPVIHVNGDNPEDLARATKLALLYKQKFAKDIIIDLICFRLWGHNEMDEPA 336 >gi|49475232|ref|YP_033273.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella henselae str. Houston-1] gi|81648131|sp|Q6G4D1|DXS_BARHE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|49238037|emb|CAF27244.1| 1-deoxyxylulose-5-phosphate synthase [Bartonella henselae str. Houston-1] Length = 640 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 13/113 (11%) Query: 129 LTGR---------QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR +GG+S G + S + F GH LG +A A K + Sbjct: 86 LTGRREKIRTLRQEGGLS---GFTKRSESVYDPFGAGHSSTSISAGLGMAVASALKAEKR 142 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 I V GDGA + G YE+ N A N +I V+ +N ++ SA Sbjct: 143 RNIVAVI-GDGAMSAGMAYEAMNNAGALNARLIVVLNDNDMSIAPPTGAMSAH 194 >gi|254283446|ref|ZP_04958414.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [gamma proteobacterium NOR51-B] gi|219679649|gb|EED35998.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [gamma proteobacterium NOR51-B] Length = 946 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 15/161 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI-----CVVCFGDGA-ANQ 194 GG +H+ F H + + V G+ A + RR D + +V GD A A Q Sbjct: 313 GGELHL---ALAFNPSHLEIVSPVVEGS--VRARQDRREDPVGNTVVPIVLHGDAAFAGQ 367 Query: 195 GQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVD 250 G V E+ ++ ++++ NNQ TS + T + + P V+ Sbjct: 368 GVVMETLQMSQTRGYRTGGTLHIVVNNQVGFTTSRIEDARSTEYCTDVAKMVQAPIFHVN 427 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 G D AV AV + ++I+++ YR RGH+ +D Sbjct: 428 GDDPEAVVFVTQLAVDFRNTFHRDVVIDLVCYRRRGHNEAD 468 >gi|254488494|ref|ZP_05101699.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Roseobacter sp. GAI101] gi|214045363|gb|EEB86001.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Roseobacter sp. GAI101] Length = 987 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 34/176 (19%), Positives = 74/176 (42%), Gaps = 4/176 (2%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 N R + ++ GD A A QG V E F ++ L ++++ NNQ T+ + Sbjct: 379 NDPNRIKVMPILLHGDAAFAGQGVVAECFALSGLRGHRTGGTMHIVVNNQIGFTTAPHFS 438 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G D AV A + + ++++++ YR GH+ Sbjct: 439 RSSPYPTDNALVVEAPIFHVNGDDPEAVVHAARVATEFRQKFHKDVVLDIICYRRFGHNE 498 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 D + +++ + RL+ + EG++++++ ++ +N E Sbjct: 499 GDEPMFTNPVMYQKIKKQKTTLTLYTDRLVKDGLIPEGEIEDMKAAFQEKMNTEFE 554 >gi|84579005|dbj|BAE72936.1| hypothetical protein [Macaca fascicularis] Length = 282 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|332535006|ref|ZP_08410822.1| 2-oxoglutarate dehydrogenase E1 component [Pseudoalteromonas haloplanktis ANT/505] gi|332035573|gb|EGI72066.1| 2-oxoglutarate dehydrogenase E1 component [Pseudoalteromonas haloplanktis ANT/505] Length = 934 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 34/230 (14%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILA--CGVDASKIMAELTGRQGGISKGKGGSM 144 GQ+ ++GM A+R ++L G + S++ E G+ Sbjct: 248 GQQEAVIGM------------AHRGRLNVLVNVLGKNPSELFDEFAGKHKETLSSGDVKY 295 Query: 145 HM-----FSTKNG-------FYGGHGIVGAQVSLGTGIAFANKYRRSDKI---CVVCFGD 189 HM F+TK G F H + V +G+ A ++ S I + GD Sbjct: 296 HMGYSSDFATKGGNVHMALAFNPSHLEIVNPVVMGSVRARLDRLGDSSGIKALPITIHGD 355 Query: 190 GAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNI 244 A QG V E+FN++ + I ++ NNQ TS T++ + Sbjct: 356 SAVTGQGVVQETFNLSQTNAFSCGGSIRIVVNNQVGFTTSKQDDVRSTDYCTDIAKMVQS 415 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+ D AV A+ + K ++I+++ YR GH+ +D N Sbjct: 416 PIFHVNSDDPEAVAFVTQIALDFRNQFKRDVVIDLVCYRRHGHNEADEPN 465 >gi|229592838|ref|YP_002874957.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens SBW25] gi|259645387|sp|C3K2R1|DXS_PSEFS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|229364704|emb|CAY52664.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens SBW25] Length = 632 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 47/224 (20%), Positives = 83/224 (37%), Gaps = 52/224 (23%) Query: 129 LTGR--QGGISKGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR Q G + K G Y G+ +S G+A A + + SD+ + Sbjct: 95 LTGRREQMGTLRQKDGIAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQGSDRKAI 154 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV------------SRASAQ 232 GDGA G +E+ N A + N++ ++ +N ++ +V SR A Sbjct: 155 AVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDMSISRNVGGLSNYLAKILSSRTYAS 214 Query: 233 TNFSKRGVSFNIPGM------------------------------QVDGMDIRAVKATMD 262 + V +PG +DG D+ + AT+ Sbjct: 215 MREGSKKVLSRLPGAWEIARRTEEYAKGMLVPGTLFEELGWNYIGPIDGHDLPTLIATLR 274 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEM 304 R KGP + ++T + +G + + DP Y +++ + Sbjct: 275 N----MRDLKGPQFLHIVTKKGKGFAPAEVDPIGYHAITKLDPL 314 >gi|77461228|ref|YP_350735.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens Pf0-1] gi|119368202|sp|Q3K660|DXS_PSEPF RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|77385231|gb|ABA76744.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens Pf0-1] Length = 632 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 39/184 (21%), Positives = 69/184 (37%), Gaps = 48/184 (26%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + + SD+ + GDGA G +E+ N A + N++ ++ Sbjct: 126 GVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVIL 185 Query: 216 ENNQYAMGTSV------------SRASAQTNFSKRGVSFNIPGM---------------- 247 +N ++ +V SR A + V +PG Sbjct: 186 NDNDMSISRNVGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAWEIARRTEEYAKGMLV 245 Query: 248 --------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--D 291 +DG D+ + AT+ R KGP + ++T + +G + + D Sbjct: 246 PGTLFEELGWNYIGPIDGHDLPTLIATLRN----MRDLKGPQFLHIVTKKGKGFAPAEVD 301 Query: 292 PANY 295 P Y Sbjct: 302 PIGY 305 >gi|332528086|ref|ZP_08404117.1| 2-oxoglutarate dehydrogenase E1 component [Rubrivivax benzoatilyticus JA2] gi|332112657|gb|EGJ12450.1| 2-oxoglutarate dehydrogenase E1 component [Rubrivivax benzoatilyticus JA2] Length = 952 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQ 219 G A A RR D + V GD A A QG V E+ +A + ++++ NNQ Sbjct: 337 GSAKARMDRRGDPQGNQVLPVQVHGDAAFAGQGVVMETLALAKTRGYFTGGTLHLVVNNQ 396 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P + V+G D AV A+ Y + K ++++ Sbjct: 397 IGFTTSDPRDSRSTLYCSDVVKMIEAPVLHVNGDDPEAVVLCTQLAMDYRQQFKKDVVVD 456 Query: 279 MLTYRYRGHSMSD 291 ++ +R GH+ D Sbjct: 457 IVCFRKLGHNEQD 469 >gi|312385485|gb|EFR29971.1| hypothetical protein AND_00717 [Anopheles darlingi] Length = 1283 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 34/173 (19%), Positives = 74/173 (42%), Gaps = 4/173 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG V+E+ +++ L + ++++ NNQ T + + + Sbjct: 405 MSILLHGDAAFCGQGVVFETMHLSDLPDYTTHGTVHIVVNNQIGFTTDPRHSRSSPYCTD 464 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+G D AV A + +II++++YR GH+ D + Sbjct: 465 VARVVNAPIFHVNGDDPEAVMHVCKVAAEWRATFHKDVIIDIVSYRRNGHNEIDEPMFTQ 524 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 ++R ++ +L+ + ++K ++ KI + E A+++ Sbjct: 525 PLMYKKIRGTKPALDIYANQLIGEGVVTAEEVKSVKDKYEKICEEAFEQAKTE 577 >gi|251826344|gb|ACT21080.1| 1-deoxy-D-xylulose 5-phosphate synthase [Dunaliella salina] Length = 753 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 46/195 (23%), Positives = 77/195 (39%), Gaps = 23/195 (11%) Query: 28 TSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIG 87 T +D V+ P + FN Q L L + E +A ++G+ GG +G Sbjct: 95 TPLLDTVNYPV----HIKNFNMPQ------LRQLCK--ELRAEIVHGVSKTGGHLSASLG 142 Query: 88 QEAVIVGMKMSLTEGDQMI---TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 + V M + D ++ + H + G + + + GG+S G + Sbjct: 143 VVELTVAMHYVFSAPDDKFIWDVGHQAYVHKIMTG---RRDKMQTIRKTGGLS---GFTK 196 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 S + F GH +S G G+A + + V GDGA G YE+ N A Sbjct: 197 RAESEYDPFGAGHS--STSISAGLGMAVGRDTKNRNNQVVAVIGDGAITGGMAYEAMNHA 254 Query: 205 ALWNLNVIYVIENNQ 219 + N+I ++ +NQ Sbjct: 255 GFLDKNMIVILNDNQ 269 >gi|255598134|ref|XP_002536935.1| benzoylformate decarboxylase, putative [Ricinus communis] gi|223518057|gb|EEF25448.1| benzoylformate decarboxylase, putative [Ricinus communis] Length = 478 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 22/115 (19%) Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 +++ F G++G + G+A A + ++++ V GDGAAN + I ALW Sbjct: 335 SRSFFSMAGGVLGYGLPAAIGVALAERDEKTNRKVVDIIGDGAAN-------YVIQALWT 387 Query: 209 -----LNVIYVIENN-QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 LN+++V+ N Y + S F+ + + +PG+ + G+D A+ Sbjct: 388 AVQHKLNILFVVPRNCAYNILKS---------FANQLSTPGVPGLDLPGLDFVAL 433 >gi|78223141|ref|YP_384888.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens GS-15] gi|118595481|sp|Q39UB1|DXS1_GEOMG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName: Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP synthase 1; Short=DXPS 1 gi|78194396|gb|ABB32163.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens GS-15] Length = 625 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 17/122 (13%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS G S+ + F GH +S G A A R Sbjct: 82 LTGRRDRFATLRTLGGIS---GFPKRCESSHDAFDTGH--TSTSISAALGFAVARDLRGE 136 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V GDG+ G YE N A N +++ V+ +N+ ++ +V A +NF R Sbjct: 137 RNKVVAVIGDGSMTGGLAYEGLNNAGHLNKDLVVVLNDNEMSIAENV---GALSNFLNRT 193 Query: 240 VS 241 V+ Sbjct: 194 VT 195 >gi|261380775|ref|ZP_05985348.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria subflava NJ9703] gi|284796238|gb|EFC51585.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria subflava NJ9703] Length = 629 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K + Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAALGMAVADKQLGN 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 ++ V GDGA GQ +E+ N A +++++ ++ +N+ ++ +V Sbjct: 139 NRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSISPNV 185 >gi|224456311|ref|ZP_03664784.1| alpha-ketoglutarate decarboxylase [Francisella tularensis subsp. tularensis MA00-2987] gi|254369939|ref|ZP_04985947.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. tularensis FSC033] gi|151568185|gb|EDN33839.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. tularensis FSC033] gi|282158364|gb|ADA77755.1| alpha-ketoglutarate decarboxylase [Francisella tularensis subsp. tularensis NE061598] Length = 937 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 10/121 (8%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTS----VSRAS 230 S + ++ GD A QG V E+F + A I+++ NNQ TS V+R+S Sbjct: 347 SKVLPILIHGDSAFCGQGVVMETFGFSLTEAYGTGGTIHLVVNNQVGFTTSSAFGVNRSS 406 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + V + P V+G D AV D A+ Y I+I+++ YR GH+ + Sbjct: 407 NYSTDVAKMV--DAPIFHVNGDDPEAVLKVTDIALEYRMKFNKDIVIDLVCYRRNGHNET 464 Query: 291 D 291 D Sbjct: 465 D 465 >gi|321460488|gb|EFX71530.1| hypothetical protein DAPPUDRAFT_308853 [Daphnia pulex] Length = 625 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S+ G+A+ K+ C GDG + +G ++E+ + A + L N+ + Sbjct: 121 GSLGQGLSVACGMAYVGKHFDKASYRTYCLIGDGESAEGSIWEALHFAGHYRLDNLCAIF 180 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ S + KR +F + VDG D+ + D+A A P Sbjct: 181 DINRLGQSEPTSLQHNMEVYRKRLEAFGFHAIVVDGHDVEELCKAFDEASATV---GKPT 237 Query: 276 IIEMLTYR-YRGHSMSDPANY 295 I T++ Y+ ++SD ++ Sbjct: 238 AILAKTFKGYKFPTISDELDW 258 >gi|303326968|ref|ZP_07357410.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfovibrio sp. 3_1_syn3] gi|302862956|gb|EFL85888.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfovibrio sp. 3_1_syn3] Length = 633 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 46/217 (21%), Positives = 76/217 (35%), Gaps = 63/217 (29%) Query: 139 GKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 G+ S H T G G G G +S G+A A + Sbjct: 89 GRADSFHTLRTLGGLSGFPRMAESPYDHFGVGHSSTSISAALGMALARDLSGLRHHVLAV 148 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS--AQTNFSKRGV---- 240 GDG+ G+ +E N+A +I V+ +N+ ++ ++V S S+R V Sbjct: 149 IGDGSLTAGEAFEGLNLAGHMGRRLIVVLNDNEMSISSNVGALSLFLSRTLSRRWVRQTR 208 Query: 241 -----------------------------SFNIPGM-----------QVDGMDIRAVKAT 260 SF PGM VDG DI A++ Sbjct: 209 REVLRFLRSIPRIGQKLALYAMRGEWSFKSFFTPGMLFEAFRFTYIGPVDGHDIPALRRH 268 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD--PANY 295 + A A GP+++ + T + +G++ ++ P Y Sbjct: 269 LQMAAA---VEDGPVLLHVRTRKGKGYAPAEKNPTQY 302 >gi|261252264|ref|ZP_05944837.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio orientalis CIP 102891] gi|260935655|gb|EEX91644.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio orientalis CIP 102891] Length = 941 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 15/164 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG +H+ F H + V +G+ A + R DK + + GD A A Q Sbjct: 312 GGDVHL---ALAFNPSHLEIVNPVVIGS--VRARQDRLGDKTGSTVLPITIHGDSAIAGQ 366 Query: 195 GQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVD 250 G V E+FN++ V + ++ NNQ TS + T + + P V+ Sbjct: 367 GVVAETFNMSQARGFQVGGTVRIVVNNQVGFTTSNPTDTRSTMYCTDIAKMVQAPIFHVN 426 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 427 ADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|167628426|ref|YP_001678925.1| 1-deoxy-d-xylulose-5-phosphate synthase [Heliobacterium modesticaldum Ice1] gi|229813279|sp|B0TEJ5|DXS_HELMI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|167591166|gb|ABZ82914.1| 1-deoxy-d-xylulose-5-phosphate synthase [Heliobacterium modesticaldum Ice1] Length = 647 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 72/190 (37%), Gaps = 52/190 (27%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G AFA ++ D + GDGA G E+ N A Sbjct: 107 SEHDVFNTGHS--STSISAALGFAFARDLKKEDGAVIAVIGDGALTGGIALEALNHAGHA 164 Query: 208 NLNVIYVIENNQY-------AMGTSVSRASAQTNF------------------------- 235 ++I V+ +N+ AM T +SR + Sbjct: 165 GNDMIVVLNDNEKSIADNVGAMSTYLSRIRTDPRYFRNKEEVEEIVRRIPSIGNHVLKVM 224 Query: 236 SKRGVSFN---IPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 K SF +PG+ +DG ++ ++ M A CR KGPI++ +LT Sbjct: 225 EKMKDSFKHLVVPGILFEELGFSYLGPIDGHNLSQLREVMTNA---CRL-KGPILVHVLT 280 Query: 282 YRYRGHSMSD 291 + +G+ ++ Sbjct: 281 KKGKGYGPAE 290 >gi|91793922|ref|YP_563573.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella denitrificans OS217] gi|123356622|sp|Q12L26|DXS_SHEDO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|91715924|gb|ABE55850.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Shewanella denitrificans OS217] Length = 622 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 50/221 (22%), Positives = 82/221 (37%), Gaps = 70/221 (31%) Query: 136 ISKGKGGSMHMFSTKNG--------------FYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH KNG F GH G VS G+A A + + Sbjct: 87 IMTGRRDEMHTIRQKNGLHPFPWREESEYDTFSVGHS--GTSVSAALGMAIAADKEAAGR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG------------------ 223 V GDGA G V+E+ N A + +++ V+ +N+ ++ Sbjct: 145 KVVAVIGDGAMTGGMVFEAMNHAGDLHKDMLVVLNDNEMSISENVGALNNHLAQLMSGRL 204 Query: 224 -TSVSRASAQ--------------------------TNFSKRGVSFNIPGMQVDGMDIRA 256 T++ S + T F + G ++ P +DG D+ A Sbjct: 205 YTTIREGSKKVLQGMPVIKEMAKRTEEHLKGMVVPGTLFEELGFNYIGP---IDGHDVDA 261 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 + TM R+ KGP I+ ++T + RG+ + DP + Sbjct: 262 LVETMRN----MRSLKGPQILHIMTKKGRGYEPAEKDPIGW 298 >gi|311898333|dbj|BAJ30741.1| putative 2-oxoglutarate dehydrogenase E1 component [Kitasatospora setae KM-6054] Length = 1250 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 8/120 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A A QG V E+ N++ L ++V+ NNQ +G + + AS++++ Sbjct: 666 LPIQIHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVVNNQ--VGFTAAPASSRSSMYC 723 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 V+ I P V+G D AV A + + ++I+++ YR RGH+ +D ++ Sbjct: 724 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQQFHKDVVIDLICYRRRGHNEADNPSF 783 >gi|119502849|ref|ZP_01624934.1| deoxyxylulose-5-phosphate synthase [marine gamma proteobacterium HTCC2080] gi|119461195|gb|EAW42285.1| deoxyxylulose-5-phosphate synthase [marine gamma proteobacterium HTCC2080] Length = 639 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 52/231 (22%), Positives = 89/231 (38%), Gaps = 52/231 (22%) Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYG-GHGIVGAQVSLGTGIAFANKYRRSDKI 182 KI+ R I + +G S T++GF G G +S G+A A + D+ Sbjct: 97 KILTGRMERLATIRQAEGLSGFPKRTESGFDTFGVGHSSTSISAAMGMAIAANQQGLDRK 156 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS----------------- 225 V GDGA G +E+ A N++ ++ +NQ ++G + Sbjct: 157 VVAVIGDGAITGGMAFEALAHAGHVRPNMLVILNDNQMSIGHNTGGLANYFAKIWASPTY 216 Query: 226 ----------VSRASAQTNFSKRG----VSFNIPGM-----------QVDGMDIRAVKAT 260 + +F+K+ S PGM +DG D+ + T Sbjct: 217 IALREGSKRILEHVRTAWDFAKKTEEQMKSLVAPGMLFEELGFNYVGPLDGHDLPQLVQT 276 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYRTREEINEMRSNHD 309 ++ + KGP ++ + T + +G S SDP Y IN++ +N D Sbjct: 277 LEAMIEL----KGPQLLHIRTVKGKGFSPAESDPVGYHA---INKIEANPD 320 >gi|225629817|ref|ZP_03787743.1| 2-oxoglutarate dehydrogenase E1 component [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591329|gb|EEH12443.1| 2-oxoglutarate dehydrogenase E1 component [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 544 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 8/114 (7%) Query: 188 GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 GD A QG V E+ +++ + V ++V+ NNQ +G + + A+++F V+ + Sbjct: 221 GDAAFIGQGVVAETLSLSNIEGYKVDGIVHVVINNQ--VGFTANPCCARSSFYCTDVAKS 278 Query: 244 I--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 I P V+G + AV + A+ Y + K ++I+++ YR GH+ D N+ Sbjct: 279 IEAPVFHVNGDNPEAVSFVANLAMEYRQKFKKDVVIDIICYRKYGHNEGDEPNF 332 >gi|92112234|ref|YP_572162.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chromohalobacter salexigens DSM 3043] gi|118595502|sp|Q1R1E5|DXS_CHRSD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|91795324|gb|ABE57463.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chromohalobacter salexigens DSM 3043] Length = 653 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 39/223 (17%) Query: 15 MALNPSVSAKRAATSSVDCVDIPF-LEGFEVSEFNK-EQELSAYRLMLLIRRFEEKAGQL 72 M L + A+R AT +D + P L F ++ + EL AY L Sbjct: 1 MKLFDEIPAERPATPLLDTCEHPAALHDFNATQLRQLADELRAY--------------LL 46 Query: 73 YGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAEL 129 Y +G GG +G + V + L T D+++ ++ + H + L Sbjct: 47 YSVGCTGGHFGAGLGVVELTVALHHILDTPYDRLVWDVGHQAYPHKI------------L 94 Query: 130 TGRQGGISKGKG-GSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 TGR+ +S + G + F S + F GH +LG +A K R ++C Sbjct: 95 TGRREQMSTIRQFGGLAAFPKRDESPYDTFGVGHSSTSISAALGMALAARTKGERR-RVC 153 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA + G +E+ A + N++ ++ +N+ ++ +V Sbjct: 154 AV-IGDGALSAGMAFEALAHAGHVDANMLVILNDNEMSISENV 195 >gi|57234479|ref|YP_181480.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dehalococcoides ethenogenes 195] gi|118595511|sp|Q3Z8G9|DXS_DEHE1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|57224927|gb|AAW39984.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dehalococcoides ethenogenes 195] Length = 647 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 67/185 (36%), Gaps = 50/185 (27%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A + D + GDGA + G +E+ N A Sbjct: 121 SPHDPFGAGHA--STSISAGLGMAVARDLAKEDYSVISVIGDGAISGGMSFEAINNAGHL 178 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTN---------FSKRGVSFNIPGM----------- 247 + I ++ +N A+ S S N F+KRG I M Sbjct: 179 HTKFIVILNDNGMAISPSTGALSKFLNNVRFDPRFEFAKRGAKQTITNMPFGKSVWAFTK 238 Query: 248 -------------------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 VDG +IR ++A + A + P++I M+T Sbjct: 239 SIKRKFEKSMLPGSLWEELGFIYLGPVDGHNIRELEAALKCAKDF---ESQPVLIHMITK 295 Query: 283 RYRGH 287 + +G+ Sbjct: 296 KGKGY 300 >gi|260438376|ref|ZP_05792192.1| 1-deoxy-D-xylulose-5-phosphate synthase [Butyrivibrio crossotus DSM 2876] gi|292808962|gb|EFF68167.1| 1-deoxy-D-xylulose-5-phosphate synthase [Butyrivibrio crossotus DSM 2876] Length = 623 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 40/88 (45%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G A + + + V GDGA G YE+ N A+L N+I ++ Sbjct: 114 GMGHASTSISAALGYVKARELSKDNYTVVSVIGDGALTGGMAYEALNNASLLKSNMIIIL 173 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFN 243 +N+ ++ +V S N ++ +N Sbjct: 174 NDNEMSISRNVGGISKVLNTTRTSARYN 201 >gi|225077244|ref|ZP_03720443.1| hypothetical protein NEIFLAOT_02299 [Neisseria flavescens NRL30031/H210] gi|224951388|gb|EEG32597.1| hypothetical protein NEIFLAOT_02299 [Neisseria flavescens NRL30031/H210] Length = 629 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K + Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAVADKQLGN 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 ++ V GDGA GQ +E+ N A +++++ ++ +N+ ++ +V Sbjct: 139 NRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSISPNV 185 >gi|118367815|ref|XP_001017117.1| 2-oxoglutarate dehydrogenase, E1 component family protein [Tetrahymena thermophila] gi|89298884|gb|EAR96872.1| 2-oxoglutarate dehydrogenase, E1 component family protein [Tetrahymena thermophila SB210] Length = 992 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 8/166 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD + + QG VYES + L + ++++I NNQ +G + + A +T Sbjct: 376 VLVHGDSSFSGQGVVYESLQMQELVGYSPRGIVHIIVNNQ--IGFTTTPAEYRTGLYSTD 433 Query: 240 V--SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 V S P V+ + V A AV Y ++++++ YR GH+ D + Sbjct: 434 VMKSVESPIFHVNADEPDLVDAVFRLAVDYRNTFHKDVMVDIIGYRLFGHNELDEPRFTQ 493 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +++ ++ KRLL ++ +++E+E + + + S Sbjct: 494 PMMYSKIEKMTPVYQKYSKRLLDEGVITQAEIEELEKHYTQALTRS 539 >gi|266622054|ref|ZP_06114989.1| transketolase [Clostridium hathewayi DSM 13479] gi|288866245|gb|EFC98543.1| transketolase [Clostridium hathewayi DSM 13479] Length = 262 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 8/136 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +SL GIA A K + + GDG +G V+E+ A L ++ +I+ Sbjct: 109 GSLGHGLSLAVGIALAGKMKNKEYFTYCILGDGECCEGSVWEAAMYACQQKLKRLVVIID 168 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH-KGPI 275 N+ + F ++ SF +VDG ++ MD+ R GP Sbjct: 169 QNRVGCDGPLEEMVQIEPFGRKWSSFGFSVEEVDGHNV----TEMDRLFLRLRNECSGPY 224 Query: 276 IIEMLTYRYRGHSMSD 291 + + + +G+ ++D Sbjct: 225 AV--IAHTVKGYGLTD 238 >gi|261400546|ref|ZP_05986671.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria lactamica ATCC 23970] gi|269209616|gb|EEZ76071.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria lactamica ATCC 23970] Length = 641 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGG 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 ++ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 NRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|145629249|ref|ZP_01785048.1| hypothetical protein CGSHi22121_10615 [Haemophilus influenzae 22.1-21] gi|144978752|gb|EDJ88475.1| hypothetical protein CGSHi22121_10615 [Haemophilus influenzae 22.1-21] Length = 573 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 4/171 (2%) Query: 192 ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGM 247 A QG V E+ N++ +V I ++ NNQ TS + T + + P + Sbjct: 2 AGQGVVQETLNMSNARGYSVGGTIRIVINNQIGFTTSNPNDTRSTEYCTDIAKMIQAPII 61 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSN 307 V+G D AV AV Y K I I++++YR GH+ +D + ++ + Sbjct: 62 HVNGDDPEAVAFAARMAVEYRNLFKRDIFIDLISYRRHGHNEADEPLATQPMMYSIIKKH 121 Query: 308 HDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 P + RL+ +E + E+ + R ++N +E D A++ Sbjct: 122 PTPRKVYADRLVSEGVMTEEQVTEMANDYRDALDNGDRVVSEWREMDTAKM 172 >gi|56707255|ref|YP_169151.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. tularensis SCHU S4] gi|110669725|ref|YP_666282.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. tularensis FSC198] gi|254874091|ref|ZP_05246801.1| alpha-ketoglutarate decarboxylase [Francisella tularensis subsp. tularensis MA00-2987] gi|56603747|emb|CAG44709.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. tularensis SCHU S4] gi|110320058|emb|CAL08092.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. tularensis FSC198] gi|254840090|gb|EET18526.1| alpha-ketoglutarate decarboxylase [Francisella tularensis subsp. tularensis MA00-2987] Length = 941 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 10/121 (8%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTS----VSRAS 230 S + ++ GD A QG V E+F + A I+++ NNQ TS V+R+S Sbjct: 351 SKVLPILIHGDSAFCGQGVVMETFGFSLTEAYGTGGTIHLVVNNQVGFTTSSAFGVNRSS 410 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + V + P V+G D AV D A+ Y I+I+++ YR GH+ + Sbjct: 411 NYSTDVAKMV--DAPIFHVNGDDPEAVLKVTDIALEYRMKFNKDIVIDLVCYRRNGHNET 468 Query: 291 D 291 D Sbjct: 469 D 469 >gi|148260621|ref|YP_001234748.1| 2-oxoglutarate dehydrogenase, E1 subunit [Acidiphilium cryptum JF-5] gi|326403815|ref|YP_004283897.1| 2-oxoglutarate dehydrogenase E1 component [Acidiphilium multivorum AIU301] gi|146402302|gb|ABQ30829.1| 2-oxoglutarate dehydrogenase E1 component [Acidiphilium cryptum JF-5] gi|325050677|dbj|BAJ81015.1| 2-oxoglutarate dehydrogenase E1 component [Acidiphilium multivorum AIU301] Length = 949 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 5/137 (3%) Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYV 214 +V +V +A + RRS + ++ GD A A QG VYE+ ++ L +++ Sbjct: 334 VVAGKVRARQDMAGDTRGRRS-VMGILMHGDAAFAGQGLVYETLAMSQLIGYRTGGTVHI 392 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 + NNQ T + A + + S P V+G D AV A + + Sbjct: 393 VVNNQIGFTTVPAHAYSGLYCTDVAKSVQSPIFHVNGDDPEAVVFVAQLATEFRQEFGVD 452 Query: 275 IIIEMLTYRYRGHSMSD 291 ++I+++ YR GH+ +D Sbjct: 453 VVIDLVCYRRHGHNETD 469 >gi|325184146|emb|CCA18604.1| 2oxoglutarate dehydrogenase E1 component putative [Albugo laibachii Nc14] gi|325186059|emb|CCA20561.1| 2oxoglutarate dehydrogenase E1 component putative [Albugo laibachii Nc14] Length = 200 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 4/112 (3%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG V E ++ L + I++I NNQ T+ + + S Sbjct: 80 LLLHGDAAFAGQGCVPEGLFLSQLPDFTTKGSIHLIVNNQVGFTTTFPDSRSTRYCSDIA 139 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 S + P + V+G I V A+ Y + I+++++ YR GH+ D Sbjct: 140 KSIDAPVLHVNGGSIHPVLRAASLAMTYRTQFRKDIVVDLIIYRRYGHNEVD 191 >gi|319639352|ref|ZP_07994103.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria mucosa C102] gi|317399536|gb|EFV80206.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria mucosa C102] Length = 629 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K + Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAALGMAVADKQLGN 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 ++ V GDGA GQ +E+ N A +++++ ++ +N+ ++ +V Sbjct: 139 NRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSISPNV 185 >gi|288870207|ref|ZP_06409665.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium hathewayi DSM 13479] gi|288868040|gb|EFD00339.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium hathewayi DSM 13479] Length = 312 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 8/117 (6%) Query: 129 LTGRQGGISKGKG-GSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 L+GR+G + G M F + + F GH +S G G+A A D Sbjct: 80 LSGRKGEFDDLRQYGGMSGFPKRKESPCDAFDTGHS--STSISAGLGLAQARDVSGEDHF 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V GDGA G YE+ N AA N I ++ +N ++ +V S N + G Sbjct: 138 VVSVIGDGALTGGMAYEALNNAARIKKNFIIILNDNNMSISENVGGMSRYLNGIRTG 194 >gi|190890626|ref|YP_001977168.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium etli CIAT 652] gi|229836075|sp|B3PS68|DXS_RHIE6 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|190695905|gb|ACE89990.1| 1-deoxy-D-xylulose-5-phosphate synthase protein [Rhizobium etli CIAT 652] Length = 638 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 34/68 (50%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A ++D+ + GDGA + G YE+ N A + +I ++ +N ++ Sbjct: 126 ISAGLGMAIAADLDKNDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIA 185 Query: 224 TSVSRASA 231 SA Sbjct: 186 PPTGAMSA 193 >gi|50511031|dbj|BAD32501.1| mKIAA1630 protein [Mus musculus] Length = 293 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 13/134 (9%) Query: 188 GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 GD + QG V E+F ++ L + + I++I NNQ T R + S G Sbjct: 6 GDASFCGQGIVLETFTLSNLPHFRIGGSIHLIVNNQLGYTTPAERGRSSLYSSDIGKLVG 65 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSDPANY-- 295 + V+G V A Y R + +I+++L YR GH+ ++P Y Sbjct: 66 CAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIVDLLCYRQWGHNELDEPFFTNPVMYKI 125 Query: 296 -RTREEINEMRSNH 308 R R+ I + + H Sbjct: 126 IRARKSIPDTYAEH 139 >gi|213158861|ref|YP_002320859.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii AB0057] gi|215482156|ref|YP_002324338.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii AB307-0294] gi|301344663|ref|ZP_07225404.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii AB056] gi|301512467|ref|ZP_07237704.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii AB058] gi|301595452|ref|ZP_07240460.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii AB059] gi|332868651|ref|ZP_08438298.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii 6013113] gi|213058021|gb|ACJ42923.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii AB0057] gi|213987887|gb|ACJ58186.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii AB307-0294] gi|332733223|gb|EGJ64418.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii 6013113] Length = 634 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 33/218 (15%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 L + +R T +D +D P + ++L +L+ + + LY G Sbjct: 2 LYTEIPTQRPVTPLLDAIDHP----------QQLRQLEHSQLLQVADELRQYI--LYAAG 49 Query: 77 MVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQ 133 GG +G + V + T D+++ ++ + H + LTGR+ Sbjct: 50 QSGGHFGANLGVVELTVALHYCFNTPNDRLVWDVGHQAYPHKI------------LTGRR 97 Query: 134 GGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCF-G 188 I+ + K G + + + G+ +S G G++ A +Y++ D VVC G Sbjct: 98 EQITTIRAKNGLAAFPAREESVFDTFGVGHSSTAISAGLGMSLARRYQK-DPCEVVCIVG 156 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 DGA G +E+ N A + ++I V+ +N ++ S Sbjct: 157 DGAMTAGMAFEAMNDAVAHDADLIVVLNDNDMSISCST 194 >gi|170757401|ref|YP_001783032.1| putative transketolase, N-terminal subunit [Clostridium botulinum B1 str. Okra] gi|169122613|gb|ACA46449.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum B1 str. Okra] Length = 274 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +GQV+E+ AA + L N+ ++ Sbjct: 117 GSLGQGISTAVGMAVAGKLDEKDYRVYTLLGDGELEEGQVWEAAMAAAHYKLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N + S + + + +FN +++DG D ++ Sbjct: 177 YNGLQIDGPCSEVMSAEPIADKFRAFNWNVIEIDGHDFNSI 217 >gi|145342439|ref|XP_001416190.1| 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor [Ostreococcus lucimarinus CCE9901] gi|144576415|gb|ABO94483.1| 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor [Ostreococcus lucimarinus CCE9901] Length = 746 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 31/64 (48%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G G+A A + D + GDGA G YE+ N A + N+I ++ Sbjct: 201 GAGHSSTSISAGLGMAVARDMQGGDNHVISIIGDGAITGGMAYEAMNNAGFLDTNMIIIL 260 Query: 216 ENNQ 219 +NQ Sbjct: 261 NDNQ 264 >gi|323495094|ref|ZP_08100181.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio brasiliensis LMG 20546] gi|323310645|gb|EGA63822.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio brasiliensis LMG 20546] Length = 941 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 5/118 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+FN++ V + ++ NNQ TS + T + + Sbjct: 353 LPITIHGDSAVAGQGVVAETFNMSQARGFRVGGTVRIVVNNQVGFTTSNPNDTRSTMYCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+ D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 413 DIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|169794568|ref|YP_001712361.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii AYE] gi|229807522|sp|B0V710|DXS_ACIBY RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|169147495|emb|CAM85356.1| 1-deoxyxylulose-5-phosphate synthase [Acinetobacter baumannii AYE] Length = 637 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 33/218 (15%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 L + +R T +D +D P + ++L +L+ + + LY G Sbjct: 5 LYTEIPTQRPVTPLLDAIDHP----------QQLRQLEHSQLLQVADELRQYI--LYAAG 52 Query: 77 MVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQ 133 GG +G + V + T D+++ ++ + H + LTGR+ Sbjct: 53 QSGGHFGANLGVVELTVALHYCFNTPNDRLVWDVGHQAYPHKI------------LTGRR 100 Query: 134 GGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCF-G 188 I+ + K G + + + G+ +S G G++ A +Y++ D VVC G Sbjct: 101 EQITTIRAKNGLAAFPAREESVFDTFGVGHSSTAISAGLGMSLARRYQK-DPCEVVCIVG 159 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 DGA G +E+ N A + ++I V+ +N ++ S Sbjct: 160 DGAMTAGMAFEAMNDAVAHDADLIVVLNDNDMSISCST 197 >gi|209548170|ref|YP_002280087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|226801561|sp|B5ZS68|DXS_RHILW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|209533926|gb|ACI53861.1| deoxyxylulose-5-phosphate synthase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 638 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 34/68 (50%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A ++D+ + GDGA + G YE+ N A + +I ++ +N ++ Sbjct: 126 ISAGLGMAIAADLDKNDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIA 185 Query: 224 TSVSRASA 231 SA Sbjct: 186 PPTGAMSA 193 >gi|325266796|ref|ZP_08133468.1| 1-deoxy-D-xylulose-5-phosphate synthase [Kingella denitrificans ATCC 33394] gi|324981728|gb|EGC17368.1| 1-deoxy-D-xylulose-5-phosphate synthase [Kingella denitrificans ATCC 33394] Length = 635 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + ++ F GF Y G+ + S+G G+A A++ S Sbjct: 85 LTGR-----KDRMHTIRQFGGLAGFPKRSESEYDDFGVGHSSTSIGAALGMAVADRLSGS 139 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + V GDGA GQ +E+ N A +N++ V+ +N+ ++ +V Sbjct: 140 NARSVAVIGDGAMTAGQAFEALNNAGDMKVNLLVVLNDNEMSISPNV 186 >gi|188588027|ref|YP_001922484.1| transketolase, thiamine diphosphate binding domain [Clostridium botulinum E3 str. Alaska E43] gi|188498308|gb|ACD51444.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum E3 str. Alaska E43] Length = 274 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + GDG +GQV+E+ AA + L N+ ++ Sbjct: 117 GSLGQGISAAVGMALAGKLDNKNYRVYTILGDGELEEGQVWEASMSAAHYKLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + ++S K+ +F + +DG D + A ++KA + KG P Sbjct: 177 YNGLQIDGNISDVMNPAPIDKKFEAFGWNTLIIDGHDYDQILAAIEKA----KNTKGQPT 232 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 233 VIVCKTVKGKGVSF 246 >gi|51246552|ref|YP_066436.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotalea psychrophila LSv54] gi|81641296|sp|Q6AJQ1|DXS_DESPS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|50877589|emb|CAG37429.1| probable 1-deoxy-D-xylulose 5-phosphate synthase [Desulfotalea psychrophila LSv54] Length = 645 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 41/185 (22%), Positives = 70/185 (37%), Gaps = 50/185 (27%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G+ A + D + GDG+ G +E+ N A Sbjct: 116 SDYDAFETGHS--STSISAALGMTLAMDLLQQDNKAIAVIGDGSMTAGMAFEALNHAGHL 173 Query: 208 NLNVIYVIENNQYAMGTSVSRASA-----QTNFSKRGV---------------------- 240 + N+I ++ +N+ ++ +V S+ T + R V Sbjct: 174 DKNLIVILNDNEMSISPNVGALSSFLSRKLTGKTMRRVKSHLVEKLQDSDVGENILNVLR 233 Query: 241 -------SFNIPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 SF PGM +DG DI A+ +T++ KGP +I +LT Sbjct: 234 KSEESFKSFFTPGMLFEAFKFDYIGPIDGHDIDALISTLNTVRDTA---KGPALIHVLTK 290 Query: 283 RYRGH 287 + +G+ Sbjct: 291 KGKGY 295 >gi|309379483|emb|CBX21849.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 641 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGG 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 ++ V GDGA GQ +E+ N A +++++ V+ +N+ ++ +V Sbjct: 139 NRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNV 185 >gi|195062179|ref|XP_001996150.1| GH13978 [Drosophila grimshawi] gi|193891942|gb|EDV90808.1| GH13978 [Drosophila grimshawi] Length = 924 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A QG E N+A + + V +++I NNQ T R + + Sbjct: 331 LNVILHGDAAFPGQGINQECLNMAYVPHFEVGGSLHLIVNNQVGFTTPAERGRSTDYTTD 390 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 S P V+G D + + A Y R + I I++ YR GH+ + DP Sbjct: 391 LAKSIQAPVFHVNGDDPETLVRITNLAFRYQREFRKDIFIDLNCYRRWGHNELDDP 446 >gi|120611906|ref|YP_971584.1| 2-oxoglutarate dehydrogenase E1 component [Acidovorax citrulli AAC00-1] gi|120590370|gb|ABM33810.1| 2-oxoglutarate dehydrogenase E1 component [Acidovorax citrulli AAC00-1] Length = 959 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 10/125 (8%) Query: 177 RRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 RR D + V+ GD A A QG + E+ +A + ++++ NNQ TS Sbjct: 351 RRGDPHGQQVLPVLVHGDAAFAGQGVIQETLALAQTRGYSTGGTVHIVINNQIGFTTSDP 410 Query: 228 RASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S T + V P + V+G D AV A+ + K ++++++ YR G Sbjct: 411 RDSRSTLYCTDVVKMIESPVLHVNGDDPEAVVLATQLALEFRMEFKKDVVVDIICYRKLG 470 Query: 287 HSMSD 291 H+ D Sbjct: 471 HNEQD 475 >gi|255067912|ref|ZP_05319767.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria sicca ATCC 29256] gi|255047794|gb|EET43258.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria sicca ATCC 29256] Length = 509 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 34/57 (59%) Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 +A A+K SD+ V GDGA GQ +E+ N A ++N++ ++ +N+ ++ +V Sbjct: 1 MAAADKLLGSDRRSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSISPNV 57 >gi|184159625|ref|YP_001847964.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii ACICU] gi|332876110|ref|ZP_08443894.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii 6014059] gi|183211219|gb|ACC58617.1| Deoxyxylulose-5-phosphate synthase [Acinetobacter baumannii ACICU] gi|193078495|gb|ABO13503.2| 1-deoxyxylulose-5-phosphate synthase [Acinetobacter baumannii ATCC 17978] gi|322509535|gb|ADX04989.1| 1-deoxyxylulose-5-phosphate synthase [Acinetobacter baumannii 1656-2] gi|323519555|gb|ADX93936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii TCDC-AB0715] gi|332735728|gb|EGJ66771.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii 6014059] Length = 634 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 33/218 (15%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 L + +R T +D +D P + ++L +L+ + + LY G Sbjct: 2 LYTEIPTQRPVTPLLDAIDHP----------QQLRQLEHSQLLQVADELRQYI--LYAAG 49 Query: 77 MVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQ 133 GG +G + V + T D+++ ++ + H + LTGR+ Sbjct: 50 QSGGHFGANLGVVELTVALHYCFNTPNDRLVWDVGHQAYPHKI------------LTGRR 97 Query: 134 GGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCF-G 188 I+ + K G + + + G+ +S G G++ A +Y++ D VVC G Sbjct: 98 EQITTIRAKNGLAAFPAREESVFDTFGVGHSSTAISAGLGMSLARRYQK-DPCEVVCIVG 156 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 DGA G +E+ N A + ++I V+ +N ++ S Sbjct: 157 DGAMTAGMAFEAMNDAVAHDADLIVVLNDNDMSISCST 194 >gi|168181954|ref|ZP_02616618.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum Bf] gi|226950845|ref|YP_002805936.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum A2 str. Kyoto] gi|237796854|ref|YP_002864406.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum Ba4 str. 657] gi|182674945|gb|EDT86906.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum Bf] gi|226842848|gb|ACO85514.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum A2 str. Kyoto] gi|229263507|gb|ACQ54540.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum Ba4 str. 657] gi|322807718|emb|CBZ05293.1| transketolase, N-terminal section [Clostridium botulinum H04402 065] Length = 274 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +GQV+E+ AA + L N+ ++ Sbjct: 117 GSLGQGISTAVGMAVAGKLDEKDYRVYTLLGDGELEEGQVWEAAMAAAHYKLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N + S + + + +FN +++DG D ++ Sbjct: 177 YNGLQIDGPCSEVMSAEPIADKFRAFNWNVIEIDGHDFNSI 217 >gi|163856142|ref|YP_001630440.1| 2-oxoglutarate dehydrogenase E1 component [Bordetella petrii DSM 12804] gi|163259870|emb|CAP42171.1| 2-oxoglutarate dehydrogenase E1 component [Bordetella petrii] Length = 956 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 16/141 (11%) Query: 173 ANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMG 223 A + RR D + V+ GD A A QG V E+ N+A ++++ NNQ Sbjct: 344 ARQERRGDHEGKQVLPVLVHGDAAFAGQGVVMETLNLAQTRGYGTGGTLHIVINNQIGFT 403 Query: 224 TSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 TS R S T + V P V+G D AV A+ Y ++++++ + Sbjct: 404 TSDPRDSRSTLYCTDVVKMIEAPVFHVNGDDPEAVVFATKLALDYRMQFSHDVVLDIVCF 463 Query: 283 RYRGH------SMSDPANYRT 297 R GH S++ P Y++ Sbjct: 464 RKLGHNEQDTPSLTQPLMYKS 484 >gi|114326885|ref|YP_744042.1| 1-deoxy-D-xylulose-5-phosphate synthase [Granulibacter bethesdensis CGDNIH1] gi|114315059|gb|ABI61119.1| 1-deoxy-D-xylulose 5-phosphate synthase [Granulibacter bethesdensis CGDNIH1] Length = 674 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 15/116 (12%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRS--- 179 LTGR+ I + GG + F+ + + F GH +S G G+A A RR+ Sbjct: 98 LTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAGHS--STSISAGLGMAVARDLRRAAGE 155 Query: 180 ----DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + + GDGA + G VYE+ N A ++ ++ +N ++ V SA Sbjct: 156 VGAGPEHVIAVIGDGAMSAGMVYEAMNNAGSLKSRLVVILNDNDMSIAPPVGAMSA 211 >gi|115523090|ref|YP_780001.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris BisA53] gi|122297370|sp|Q07SR3|DXS_RHOP5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|115517037|gb|ABJ05021.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris BisA53] Length = 640 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 8/109 (7%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + GG + F+ + + F GH +S G G+A A+ + Sbjct: 87 LTGRRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHS--STSISAGLGMAVASDLAGTKNN 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A N +I ++ +N ++ V SA Sbjct: 145 VIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSA 193 >gi|134295582|ref|YP_001119317.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia vietnamiensis G4] gi|134138739|gb|ABO54482.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia vietnamiensis G4] Length = 954 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDDDGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV + A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAIQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|311108028|ref|YP_003980881.1| transketolase 1 [Achromobacter xylosoxidans A8] gi|310762717|gb|ADP18166.1| transketolase 1 [Achromobacter xylosoxidans A8] Length = 271 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 1/107 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S G G+A + D V GDG +GQV+E+ AA L+ ++ +I+ Sbjct: 111 GSIGHALSNGVGMAVGGRMSGRDFNVFVLLGDGEMQEGQVWEAALFAAHNRLSRLVAIID 170 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 N Y + V + ++ +F +VDG ++ + A + + Sbjct: 171 RNGYQLDGKVDDVMGVESLKEKWQAFGWEVHEVDGHNLAELTALLRR 217 >gi|77748592|ref|NP_641868.2| 2-oxoglutarate dehydrogenase E1 component [Xanthomonas axonopodis pv. citri str. 306] Length = 942 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 14/138 (10%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 F + R+S + ++ GD A A QG V E F ++ V ++++ NNQ TS + Sbjct: 343 FGDAERKS-VLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVVNNQIGFTTS-T 400 Query: 228 RASAQTNFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R A++ V+ I P V+G D AV A + + K ++I+++ YR Sbjct: 401 RDDARSTLYCTDVAKMIGAPVFHVNGDDPDAVMFVSKLAYEFRQQFKKDVVIDLVCYRRW 460 Query: 286 GHSMSD------PANYRT 297 GH+ +D P Y+T Sbjct: 461 GHNEADEPAATQPVMYQT 478 >gi|300812647|ref|ZP_07093059.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496377|gb|EFK31487.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 583 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 36/73 (49%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G +SL TG+A A + + GDG+ G YE N AAL N++ Sbjct: 115 YYAVGHTSTSISLATGMAKARDLLGGSERIMAVIGDGSLTGGMAYEGLNNAALEKGNLVI 174 Query: 214 VIENNQYAMGTSV 226 VI +NQ+++ +V Sbjct: 175 VINDNQWSIDQNV 187 >gi|198283750|ref|YP_002220071.1| deoxyxylulose-5-phosphate synthase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665347|ref|YP_002426381.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248271|gb|ACH83864.1| deoxyxylulose-5-phosphate synthase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517560|gb|ACK78146.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 624 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 12/107 (11%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+G ++G G G G +S G G+A A + + Sbjct: 81 ILTGRGARFPQLRIRDGLSGFLKRDESPYDSFGAGHSSTSISAGLGMAVAARLEHKSRQV 140 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 V GDGA G YE+ N + + +++ V+ +N+ ++ +V S Sbjct: 141 VAIIGDGAMTAGLAYEALNNGGVLDADLLVVLNDNEMSISPNVGAVS 187 >gi|170758969|ref|YP_001788724.1| putative transketolase, N-terminal subunit [Clostridium botulinum A3 str. Loch Maree] gi|169405958|gb|ACA54369.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum A3 str. Loch Maree] Length = 274 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +GQV+E+ AA + L N+ ++ Sbjct: 117 GSLGQGISTAVGMAVAGKLDEKDYRVYTLLGDGELEEGQVWEAAMAAAHYKLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N + S + + + +FN +++DG D ++ Sbjct: 177 YNGLQIDGPCSEVMSAEPIADKFRAFNWNVIEIDGHDFNSI 217 >gi|148381335|ref|YP_001255876.1| putative transketolase, N-terminal subunit [Clostridium botulinum A str. ATCC 3502] gi|153932037|ref|YP_001385712.1| putative transketolase, N-terminal subunit [Clostridium botulinum A str. ATCC 19397] gi|153937280|ref|YP_001389118.1| putative transketolase, N-terminal subunit [Clostridium botulinum A str. Hall] gi|148290819|emb|CAL84954.1| transketolase, thiamine disphosphate-bindin subunit [Clostridium botulinum A str. ATCC 3502] gi|152928081|gb|ABS33581.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum A str. ATCC 19397] gi|152933194|gb|ABS38693.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum A str. Hall] Length = 274 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +GQV+E+ AA + L N+ ++ Sbjct: 117 GSLGQGISTAVGMAVAGKLDEKDYRVYTLLGDGELEEGQVWEAAMAAAHYKLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N + S + + + +FN +++DG D ++ Sbjct: 177 YNGLQIDGPCSEVMSAEPIADKFRAFNWNVIEIDGHDFNSI 217 >gi|39934029|ref|NP_946305.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris CGA009] gi|192289449|ref|YP_001990054.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris TIE-1] gi|81563891|sp|Q6NB76|DXS_RHOPA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|229836076|sp|B3QFY7|DXS_RHOPT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|39647877|emb|CAE26396.1| 1-D-deoxyxylulose 5-phosphate synthase [Rhodopseudomonas palustris CGA009] gi|192283198|gb|ACE99578.1| deoxyxylulose-5-phosphate synthase [Rhodopseudomonas palustris TIE-1] Length = 641 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 8/109 (7%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + GG + F+ + + F GH +S G G+A A++ Sbjct: 87 LTGRRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHS--STSISAGLGMAVASELAGKKNN 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A N +I ++ +N ++ V SA Sbjct: 145 VIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSA 193 >gi|257459017|ref|ZP_05624136.1| 1-deoxy-D-xylulose-5-phosphate synthase [Campylobacter gracilis RM3268] gi|257443402|gb|EEV18526.1| 1-deoxy-D-xylulose-5-phosphate synthase [Campylobacter gracilis RM3268] Length = 610 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 5/93 (5%) Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 GGIS S F + F GH +SL G A A K + D+I VV GDG+ + Sbjct: 85 GGISGYTKPSESKF---DYFVAGHA--STSISLAVGAAKAIKLKGEDRIPVVLIGDGSMS 139 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G YE+ N L I ++ +N+ ++ + Sbjct: 140 GGMTYEAMNELGDLRLPCIIILNDNKMSISKPI 172 >gi|210134554|ref|YP_002300993.1| transketolase [Helicobacter pylori P12] gi|210132522|gb|ACJ07513.1| transketolase A [Helicobacter pylori P12] Length = 641 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 14/129 (10%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKQAISHKVYCLC-GDGDLQEGISYESASLAGHLNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 N + VI ++NQ ++ +++ S R V+ N ++ DG D +A+ +++A Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFVAQNWEVLECDGHDYQAIHNALEEAK--- 234 Query: 269 RAHKGPIII 277 ++HK ++I Sbjct: 235 KSHKPTLLI 243 >gi|163761269|ref|ZP_02168345.1| Transketolase-like protein [Hoeflea phototrophica DFL-43] gi|162281608|gb|EDQ31903.1| Transketolase-like protein [Hoeflea phototrophica DFL-43] Length = 309 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 20/141 (14%) Query: 157 HGIVGAQVSLGTGIAFANKYRRSD--KICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 +G +G +S G G+AF K RR D ++CV DG +GQ +E+ AA ++ ++ Sbjct: 141 NGTLGIGLSTGAGLAFGRK-RRGDTGEVCVF-MSDGEVQEGQTWEAVQAAAHHGIDNLWA 198 Query: 215 IE--NNQY---AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 + N+Q AM + + + FS +F +++D D+ A++ D+ Sbjct: 199 LMDVNDQQCDGAMDSVMEVRDIKAKFS----AFGAVCVEIDAHDLGAMRQAKDE------ 248 Query: 270 AHKG-PIIIEMLTYRYRGHSM 289 HKG P+II + +G S Sbjct: 249 PHKGQPLIILARSSPTKGMSF 269 >gi|153940725|ref|YP_001392751.1| putative transketolase, N-terminal subunit [Clostridium botulinum F str. Langeland] gi|152936621|gb|ABS42119.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum F str. Langeland] gi|295320730|gb|ADG01108.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum F str. 230613] Length = 274 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +GQV+E+ AA + L N+ ++ Sbjct: 117 GSLGQGISTAVGMAVAGKLDEKDYRVYTLLGDGELEEGQVWEAAMAAAHYKLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N + S + + + +FN +++DG D ++ Sbjct: 177 YNGLQIDGPCSEVMSAEPIADKFRAFNWNVIEIDGHDFNSI 217 >gi|73985437|ref|XP_533792.2| PREDICTED: similar to Transketolase (TK) [Canis familiaris] Length = 619 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N+I ++ Sbjct: 94 GSLGQGLGAACGMAYTGKYFDKASYRVYCMMGDGELSEGSVWEAMAFASIYKLDNLIAIL 153 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR SF + VDG + + A+ +A P Sbjct: 154 DINRLGQSDPTPLQHQVDVYQKRCESFGWHAVIVDGHSVEEL------CKAFGQAKHQPT 207 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 208 AIIAKTFKGRG 218 >gi|39995792|ref|NP_951743.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens PCA] gi|81703187|sp|Q74FC3|DXS1_GEOSL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName: Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP synthase 1; Short=DXPS 1 gi|39982556|gb|AAR34016.1| deoxyxylulose-5-phosphate synthase [Geobacter sulfurreducens PCA] gi|298504800|gb|ADI83523.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens KN400] Length = 637 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 6/124 (4%) Query: 130 TGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFG 188 T RQ GGIS G S+ + F GH +S G G+A A + R V G Sbjct: 91 TQRQYGGIS---GFPKRSESSHDAFDTGHS--STSISAGLGMAMARELRGGSNKVVAVIG 145 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ 248 DG+ G +E+ N A N+I V+ +N+ ++ +V S+ + G F + Sbjct: 146 DGSMTGGIAFEALNQAGHLKKNLIVVLNDNEMSISPNVGAFSSFVSRKLTGSYFRELKKE 205 Query: 249 VDGM 252 V G+ Sbjct: 206 VQGL 209 >gi|325519601|gb|EGC98952.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia sp. TJI49] Length = 954 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D+ + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDEDGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLATQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|316932492|ref|YP_004107474.1| deoxyxylulose-5-phosphate synthase [Rhodopseudomonas palustris DX-1] gi|315600206|gb|ADU42741.1| deoxyxylulose-5-phosphate synthase [Rhodopseudomonas palustris DX-1] Length = 641 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 8/109 (7%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + GG + F+ + + F GH +S G G+A A++ Sbjct: 87 LTGRRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHS--STSISAGLGMAVASELAGKKNN 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A N +I ++ +N ++ V SA Sbjct: 145 VIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSA 193 >gi|326316809|ref|YP_004234481.1| 2-oxoglutarate dehydrogenase, E1 subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373645|gb|ADX45914.1| 2-oxoglutarate dehydrogenase, E1 subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 959 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 10/125 (8%) Query: 177 RRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 RR D + V+ GD A A QG + E+ +A + ++++ NNQ TS Sbjct: 351 RRGDPHGQQVLPVLVHGDAAFAGQGVIQETLALAQTRGYSTGGTVHIVINNQIGFTTSDP 410 Query: 228 RASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S T + V P + V+G D AV A+ + K ++++++ YR G Sbjct: 411 RDSRSTLYCTDVVKMIESPVLHVNGDDPEAVVLATQLALEFRMEFKKDVVVDIICYRKLG 470 Query: 287 HSMSD 291 H+ D Sbjct: 471 HNEQD 475 >gi|260557000|ref|ZP_05829217.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii ATCC 19606] gi|260409606|gb|EEX02907.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii ATCC 19606] Length = 637 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 33/218 (15%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 L + +R T +D +D P + ++L +L+ + + LY G Sbjct: 5 LYTEIPTQRPVTPLLDAIDHP----------QQLRQLEHSQLLQVADELRQYI--LYAAG 52 Query: 77 MVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQ 133 GG +G + V + T D+++ ++ + H + LTGR+ Sbjct: 53 QSGGHFGANLGVVELTVALHYCFNTPNDRLVWDVGHQAYPHKI------------LTGRR 100 Query: 134 GGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCF-G 188 I+ + K G + + + G+ +S G G++ A +Y++ D VVC G Sbjct: 101 EQITTIRAKNGLAAFPAREESVFDTFGVGHSSTAISAGLGMSLARRYQK-DPCEVVCIVG 159 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 DGA G +E+ N A + ++I V+ +N ++ S Sbjct: 160 DGAMTAGMAFEAMNDAVAHDADLIVVLNDNDMSISCST 197 >gi|323339857|ref|ZP_08080126.1| 1-deoxy-D-xylulose 5-phosphate synthase [Lactobacillus ruminis ATCC 25644] gi|323092730|gb|EFZ35333.1| 1-deoxy-D-xylulose 5-phosphate synthase [Lactobacillus ruminis ATCC 25644] Length = 585 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH VSL TG+A + V GDG+ + G +E FN A++ + N+I Sbjct: 116 FTVGH--TSTSVSLATGLAQGRDLLSGKENIVAIIGDGSLSGGLAFEGFNNASILDSNLI 173 Query: 213 YVIENNQYAM 222 VI +NQ ++ Sbjct: 174 IVINDNQMSI 183 >gi|87119167|ref|ZP_01075065.1| 2-oxoglutarate dehydrogenase (E1 subunit) [Marinomonas sp. MED121] gi|86165558|gb|EAQ66825.1| 2-oxoglutarate dehydrogenase (E1 subunit) [Marinomonas sp. MED121] Length = 945 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 16/156 (10%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A + RR+D + + GD A A QG V E+F ++ ++++ NNQ Sbjct: 339 GSVRARQDRRNDTTGKTVVPISIHGDSAFAGQGVVMETFQMSQTRGYKTGGTVHIVVNNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 T+ T +S P V+G D AV A+ Y ++I+ Sbjct: 399 VGFTTNRQEDVRSTQYSTDVAKMIQAPIFHVNGDDPEAVLFVTQLALDYRYEFGRDVVID 458 Query: 279 MLTYRYRGHSMSD------PANYRTREEINEMRSNH 308 ++ YR RGH+ +D P Y+ ++ R+ + Sbjct: 459 LVCYRRRGHNETDEPSGTQPLMYQVINKLKTTRTQY 494 >gi|325925702|ref|ZP_08187078.1| 2-oxoglutarate dehydrogenase E1 component [Xanthomonas perforans 91-118] gi|325543871|gb|EGD15278.1| 2-oxoglutarate dehydrogenase E1 component [Xanthomonas perforans 91-118] Length = 942 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 14/138 (10%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 F + R+S + ++ GD A A QG V E F ++ V ++++ NNQ TS + Sbjct: 343 FGDAERKS-VLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVVNNQIGFTTS-T 400 Query: 228 RASAQTNFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R A++ V+ I P V+G D AV A + + K ++I+++ YR Sbjct: 401 RDDARSTLYCTDVAKMIGAPVFHVNGDDPDAVMFVSKLAYEFRQQFKKDVVIDLVCYRRW 460 Query: 286 GHSMSD------PANYRT 297 GH+ +D P Y+T Sbjct: 461 GHNEADEPAATQPVMYQT 478 >gi|169632324|ref|YP_001706060.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii SDF] gi|229807521|sp|B0VQB8|DXS_ACIBS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|169151116|emb|CAO99782.1| 1-deoxyxylulose-5-phosphate synthase [Acinetobacter baumannii] Length = 637 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 47/217 (21%), Positives = 90/217 (41%), Gaps = 33/217 (15%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 L + +R T +D +D P + ++L +L+ + + LY G Sbjct: 5 LYTEIPTQRPVTPLLDAIDHP----------QQLRQLEHSQLLQVADELRQYI--LYAAG 52 Query: 77 MVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQ 133 GG +G + V + T D+++ ++ + H + LTGR+ Sbjct: 53 QSGGHFGANLGVVELTVALHYCFNTPNDRLVWDVGHQAYPHKI------------LTGRR 100 Query: 134 GGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCF-G 188 I+ + K G + + + G+ +S G G++ A +Y++ D VVC G Sbjct: 101 EQITTIRAKNGLAAFPAREESVFDTFGVGHSSTAISAGLGMSLARRYQK-DPCEVVCIVG 159 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 DGA G +E+ N A + ++I V+ +N ++ S Sbjct: 160 DGAMTAGMAFEAMNDAVAHDADLIVVLNDNDMSISCS 196 >gi|166030418|ref|ZP_02233247.1| hypothetical protein DORFOR_00079 [Dorea formicigenerans ATCC 27755] gi|166029776|gb|EDR48533.1| hypothetical protein DORFOR_00079 [Dorea formicigenerans ATCC 27755] Length = 620 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 50/213 (23%) Query: 129 LTGRQGGISKGKG-GSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G + G M F + + F GH +S G G A + D Sbjct: 79 LTGRKEGFEDLRSYGGMSGFPKRKESQCDAFDTGHS--STSISAGLGYVRARDLKHEDYT 136 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV---SRASAQTNFS--- 236 + GDG+ G YE+ N A+ N I V+ +N ++ +V SR A + Sbjct: 137 VISVIGDGSLTGGMAYEALNNASNLKTNFIVVLNDNHMSISENVGGMSRYLANLRTADIY 196 Query: 237 ---KRGVS--------------------------FNIPGMQVDGMDIRAVKAT------- 260 K+GV+ +PGM + M I + Sbjct: 197 TGLKKGVTNALQQVPVMGDRMIEHIRKTKSSIKQLVVPGMFFEDMGITYLGPIPGHNLPM 256 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + KA+ + +GP+++ ++T + +G+ ++ A Sbjct: 257 LCKALKEAKKVEGPVLLHVMTTKGKGYEPAETA 289 >gi|13474797|ref|NP_106367.1| transketolase [Mesorhizobium loti MAFF303099] gi|14025553|dbj|BAB52153.1| transketolase [Mesorhizobium loti MAFF303099] Length = 279 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 3/109 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+ K ++SD DG +G +E+ AA L N+I +++ Sbjct: 119 GSLGHGLGIAVGMCLGLKRKQSDCFVYNLLSDGELGEGSTWEAAMSAAHHKLDNLIAIVD 178 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN A G S + S++ + + +F +VDG DI A++A D A Sbjct: 179 FNNLQADGPSTAMLSSEP-VTDKFEAFGWHAQRVDGNDIEALRAAFDNA 226 >gi|147669319|ref|YP_001214137.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dehalococcoides sp. BAV1] gi|226740148|sp|A5FRB9|DXS_DEHSB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|146270267|gb|ABQ17259.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dehalococcoides sp. BAV1] Length = 633 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 41/185 (22%), Positives = 67/185 (36%), Gaps = 50/185 (27%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A + D + GDGA + G +E+ N A Sbjct: 107 SPHDPFGAGHA--STSISAGLGMAVARDLAKEDYSVISVIGDGAISGGMSFEAINNAGHL 164 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTN---------FSKRGVSFNIPGM----------- 247 + I ++ +N A+ S S N F+KR I M Sbjct: 165 HTKFIVILNDNGMAISPSTGALSKFLNNVRFDPRFEFAKRNAKQTITNMPFGKAVWAFTK 224 Query: 248 -------------------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 VDG +IR ++A + +A + P++I M+T Sbjct: 225 SIKRKFEKSMLPGSLWEELGFIYLGPVDGHNIRELEAALKRAKDF---ESKPVLIHMITK 281 Query: 283 RYRGH 287 + +G+ Sbjct: 282 KGKGY 286 >gi|195449272|ref|XP_002072001.1| GK22616 [Drosophila willistoni] gi|194168086|gb|EDW82987.1| GK22616 [Drosophila willistoni] Length = 922 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG E +A + + V +++I NNQ T +R + S Sbjct: 329 LNVILHGDAAFAGQGINQECLTMAYVPHFEVGGSLHLIVNNQVGFTTPAARGRSTDYSSD 388 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 S P V+G D + + A Y R + I I++ +R GH+ + DP Sbjct: 389 LAKSIQAPVFHVNGDDPETLARITNLAFRYQRKFRKDIFIDLNCFRRWGHNELDDP 444 >gi|195054317|ref|XP_001994072.1| GH17621 [Drosophila grimshawi] gi|193895942|gb|EDV94808.1| GH17621 [Drosophila grimshawi] Length = 626 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 2/101 (1%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++G G+A+ K + V GDG + +G V+ES + AA + L N+ Sbjct: 120 GTGSLGQGVAVGAGMAYVGKNLDNASYRTYVIVGDGESAEGSVWESLHFAAHYKLDNLCV 179 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + + N+ S + R +F + VDG DI Sbjct: 180 IFDVNRLGQSEPTSLQHQMDVYRDRLEAFGFNALVVDGHDI 220 >gi|241759455|ref|ZP_04757559.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria flavescens SK114] gi|241320237|gb|EER56570.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria flavescens SK114] Length = 629 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR K + +M + GF Y G+ + S+G G+A A+K + Sbjct: 84 LTGR-----KNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAALGMAVADKQLGN 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 ++ V GDGA GQ +E+ N A +++++ ++ +N+ ++ +V Sbjct: 139 NRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSISPNV 185 >gi|239503261|ref|ZP_04662571.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii AB900] Length = 634 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 33/218 (15%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 L + +R T +D +D P + ++L +L+ + + LY G Sbjct: 2 LYTEIPTQRPVTPLLDAIDHP----------QQLRQLEHSQLLQVADELRQYI--LYAAG 49 Query: 77 MVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQ 133 GG +G + V + T D+++ ++ + H + LTGR+ Sbjct: 50 QSGGHFGANLGVVELTVALHYCFNTPNDRLVWDVGHQAYPHKI------------LTGRR 97 Query: 134 GGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCF-G 188 I+ + K G + + + G+ +S G G++ A +Y++ D VVC G Sbjct: 98 EQITTIRAKNGLAAFPAREESVFDTFGVGHSSTAISAGLGMSLARRYQK-DPCEVVCIVG 156 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 DGA G +E+ N A + ++I V+ +N ++ S Sbjct: 157 DGAMTAGMAFEAMNDAVAHDADLIVVLNDNDMSISCST 194 >gi|217031574|ref|ZP_03437079.1| hypothetical protein HPB128_21g132 [Helicobacter pylori B128] gi|298736708|ref|YP_003729238.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori B8] gi|216946774|gb|EEC25370.1| hypothetical protein HPB128_21g132 [Helicobacter pylori B128] gi|298355902|emb|CBI66774.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori B8] Length = 616 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 18/194 (9%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IVGM + + I T+++ + H L G ++ + + G G Sbjct: 35 GGHLSSSLGAVELIVGMHALFDCQKNPFIFDTSHQAYAHKLLTGRFESFSTLRQFKGLSG 94 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH VS+G G+A A +R+ + + GDG+ + Sbjct: 95 FTKPSE-------SAYDYFIAGHS--STSVSIGVGVAKAFCLKRALGMPIALLGDGSISA 145 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G YE+ N +I ++ +N+ ++ T + S + +G P Q + Sbjct: 146 GIFYEALNELGDRKYPMIMILNDNEMSISTPIGALSKALSQLMKG-----PFYQSFRSKV 200 Query: 255 RAVKATMDKAVAYC 268 + + +T+ ++V Y Sbjct: 201 KKILSTLPESVNYL 214 >gi|78047134|ref|YP_363309.1| 2-oxoglutarate dehydrogenase E1 component [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035564|emb|CAJ23214.1| Oxoglutarate dehydrogenase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 990 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 14/138 (10%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 F + R+S + ++ GD A A QG V E F ++ V ++++ NNQ TS + Sbjct: 391 FGDAERKS-VLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVVNNQIGFTTS-T 448 Query: 228 RASAQTNFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R A++ V+ I P V+G D AV A + + K ++I+++ YR Sbjct: 449 RDDARSTLYCTDVAKMIGAPVFHVNGDDPDAVMFVSKLAYEFRQQFKKDVVIDLVCYRRW 508 Query: 286 GHSMSD------PANYRT 297 GH+ +D P Y+T Sbjct: 509 GHNEADEPAATQPVMYQT 526 >gi|134298942|ref|YP_001112438.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum reducens MI-1] gi|134051642|gb|ABO49613.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum reducens MI-1] Length = 635 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 40/185 (21%), Positives = 69/185 (37%), Gaps = 51/185 (27%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G+A + V GDG+ G +E+ N A Sbjct: 110 SIHDAFATGHS--STSISAALGMALTRDLKGEKHSVVAVIGDGSLTGGMAFEALNYAGHL 167 Query: 208 NLNVIYVIENNQYAMGTSV-------SRASAQTNFS------------------------ 236 N+I V+ +N+ ++ +V SR +S Sbjct: 168 KTNMIVVLNDNEMSIAPNVGALSGYLSRLRTDPKYSKGKDEIADLLQKIPHGPKLLKVVD 227 Query: 237 --KRGVSF-NIPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 K V + +PGM VDG D +AV + +A +A GP+++ ++T Sbjct: 228 RLKDSVKYLVVPGMLFEELGFTYLGPVDGHDTKAVLTMLQQA----KAVSGPVLVHVITK 283 Query: 283 RYRGH 287 + +G+ Sbjct: 284 KGKGY 288 >gi|332701468|ref|ZP_08421556.1| Transketolase [Desulfovibrio africanus str. Walvis Bay] gi|332551617|gb|EGJ48661.1| Transketolase [Desulfovibrio africanus str. Walvis Bay] Length = 621 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 7/113 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKI---CVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G +G +S+G G+A RR DK+ V GD +G V+E+ IAA + L N++ Sbjct: 119 GSLGQGLSIGLGMAL--NARRLDKLPCRSFVLLGDSEMAEGSVWEAMEIAAHYKLDNLVG 176 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAV 265 +++ N+ ++++ +F + V DG D+R V A ++A+ Sbjct: 177 ILDVNRLGQRGETLHGHDIAAWARKAEAFGWRAIPVEDGHDLRQVLAAYEQAL 229 >gi|294666496|ref|ZP_06731738.1| Oxoglutarate dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603727|gb|EFF47136.1| Oxoglutarate dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 992 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 14/138 (10%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 F + R+S + ++ GD A A QG V E F ++ V ++++ NNQ TS + Sbjct: 393 FGDAERKS-VLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVVNNQIGFTTS-T 450 Query: 228 RASAQTNFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R A++ V+ I P V+G D AV A + + K ++I+++ YR Sbjct: 451 RDDARSTLYCTDVAKMIGAPVFHVNGDDPDAVMFVSKLAYEFRQQFKKDVVIDLVCYRRW 510 Query: 286 GHSMSD------PANYRT 297 GH+ +D P Y+T Sbjct: 511 GHNEADEPAATQPVMYQT 528 >gi|158424735|ref|YP_001526027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azorhizobium caulinodans ORS 571] gi|172047993|sp|A8IBS1|DXS_AZOC5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|158331624|dbj|BAF89109.1| deoxyxylulose-5-phosphate synthase [Azorhizobium caulinodans ORS 571] Length = 641 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 22/173 (12%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +GG + F+ + + F H +S G G+A A D+ Sbjct: 86 LTGRRDRIRTLRQGGGLSGFTRRSESEYDPFGAAHS--STSISAGLGMAVARDLSGGDRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY-------AMGTSVSRA-SAQTN 234 + GDGA + G YE+ N A + +I ++ +N AM ++R S +T Sbjct: 144 VIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAPPTGAMSAYLARLISGRTY 203 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH-KGPIIIEMLTYRYRG 286 S R + G Q+ G + VK KA + R G + E + + Y G Sbjct: 204 LSLREI-----GKQLAGHLPKFVKDGAAKAEEFARGFWTGGTLFEEMGFYYVG 251 >gi|325685662|gb|EGD27744.1| deoxyxylulose-5-phosphate synthase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 583 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 36/73 (49%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G +SL TG+A A + + GDG+ G YE N AAL N++ Sbjct: 115 YYAVGHTSTSISLATGMAKARDLLGGSERIMAVIGDGSLTGGMAYEGLNNAALEKGNLVI 174 Query: 214 VIENNQYAMGTSV 226 VI +NQ+++ +V Sbjct: 175 VINDNQWSIDQNV 187 >gi|302819386|ref|XP_002991363.1| hypothetical protein SELMODRAFT_429697 [Selaginella moellendorffii] gi|300140756|gb|EFJ07475.1| hypothetical protein SELMODRAFT_429697 [Selaginella moellendorffii] Length = 187 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%) Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPI 311 MD+ V +A+A + G I++E T++Y +S P + + +PI Sbjct: 1 MDMLKVGEVAKEAIARAQRGDGLILVECETHQYIEVILS-PIWTSSASLQKSKHAACNPI 59 Query: 312 EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +K LL + ASE +LK IE +I+ ++VEFA + P ++ ++ Sbjct: 60 PPFKKYLLEERLASEAELKAIEKKNEEIVEDAVEFADTSLLPPHIQILENV 110 >gi|291525240|emb|CBK90827.1| 1-deoxy-D-xylulose-5-phosphate synthase [Eubacterium rectale DSM 17629] Length = 618 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 86/225 (38%), Gaps = 60/225 (26%) Query: 129 LTGRQGGISKGKG-GSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G S + G M F S + F GH +S G G+A A + D Sbjct: 80 LTGRKDGFSSLRQYGGMSGFPKADESDCDCFNTGHS--STSISAGLGLATARQVTGDDYH 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS----------RASAQ 232 V GDGA G YE+ N A+ N I V+ +N ++ +V A A Sbjct: 138 VVSVIGDGALTGGMAYEALNNASSVKGNFIIVLNDNNMSISENVGGISQYLSGFRTADAY 197 Query: 233 TNFSKRGV-SFN------------------------IPGM-----------QVDGMDIRA 256 +F + S N IPGM VDG DI+ Sbjct: 198 RDFKNNVMNSLNHIPIYGERMVKHIRNTKSSIKQLFIPGMFFEEMGIIYLGPVDGSDIKE 257 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD--PANYRTRE 299 + D+A + GP+++ +LT + G+ ++ P+ + E Sbjct: 258 MCRVFDEA----KRVDGPVLVHVLTKKGSGYGPAERYPSRFHGAE 298 >gi|289432586|ref|YP_003462459.1| deoxyxylulose-5-phosphate synthase [Dehalococcoides sp. GT] gi|288946306|gb|ADC74003.1| deoxyxylulose-5-phosphate synthase [Dehalococcoides sp. GT] Length = 633 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 41/185 (22%), Positives = 67/185 (36%), Gaps = 50/185 (27%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A + D + GDGA + G +E+ N A Sbjct: 107 SPHDPFGAGHA--STSISAGLGMAVARDLAKEDYSVISVIGDGAISGGMSFEAINNAGHL 164 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTN---------FSKRGVSFNIPGM----------- 247 + I ++ +N A+ S S N F+KR I M Sbjct: 165 HTKFIVILNDNGMAISPSTGALSKFLNNVRFDPRFEFAKRNAKQTITNMPFGKAVWAFTK 224 Query: 248 -------------------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 VDG +IR ++A + +A + P++I M+T Sbjct: 225 SIKRKFEKSMLPGSLWEELGFIYLGPVDGHNIRELEAALKRAKDF---ESKPVLIHMITK 281 Query: 283 RYRGH 287 + +G+ Sbjct: 282 KGKGY 286 >gi|167750992|ref|ZP_02423119.1| hypothetical protein EUBSIR_01977 [Eubacterium siraeum DSM 15702] gi|167656171|gb|EDS00301.1| hypothetical protein EUBSIR_01977 [Eubacterium siraeum DSM 15702] Length = 593 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 20/166 (12%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GGH + +S GIA A + D V GDGA G+ YE N A Sbjct: 99 SEHDAFIGGHSSI--SISAALGIAEAMRSDGDDHSVVAVIGDGALTGGEAYEGLNNAGKS 156 Query: 208 NLNVIYVIENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDI-RAV 257 N+I V+ +N+ ++ + R++ + +K V + + G I +AV Sbjct: 157 RCNLIVVLNDNEMSISKNTGALALYLAQIRSTRKYYSTKNSVKNVLDKTPIIGKGIGKAV 216 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINE 303 K T + + Y H + E L ++Y G P + +E+ E Sbjct: 217 KGT-KQLLKYAIYHSN--LFEDLGFKYLG-----PIDGHNLDELTE 254 >gi|56785668|gb|AAW28999.1| 1-deoxy-D-xylulose-5-phosphate synthase [Antirrhinum majus] Length = 733 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A ++ + GDGA GQ YE+ N A Sbjct: 191 SVHDAFGAGHS--STSISAGLGMAVARDLLGNNNHVISVIGDGAMTAGQAYEAMNNAGYL 248 Query: 208 NLNVIYVI-ENNQYAMGTSVSRASA 231 + N+I ++ +N Q ++ T+ A Sbjct: 249 DSNLIIILNDNKQVSLPTATVDGPA 273 >gi|313124313|ref|YP_004034572.1| 1-deoxy-d-xylulose-5-phosphate synthase 2 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280876|gb|ADQ61595.1| 1-deoxy-d-xylulose-5-phosphate synthase 2 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 583 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 36/73 (49%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G +SL TG+A A + + GDG+ G YE N AAL N++ Sbjct: 115 YYAVGHTSTSISLATGMAKARDLLGGSERIMAVIGDGSLTGGMAYEGLNNAALEKGNLVI 174 Query: 214 VIENNQYAMGTSV 226 VI +NQ+++ +V Sbjct: 175 VINDNQWSIDQNV 187 >gi|73748558|ref|YP_307797.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dehalococcoides sp. CBDB1] gi|118595512|sp|Q3ZXC2|DXS_DEHSC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|73660274|emb|CAI82881.1| deoxyxylulose-5-phosphate synthase [Dehalococcoides sp. CBDB1] Length = 647 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 41/185 (22%), Positives = 67/185 (36%), Gaps = 50/185 (27%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A + D + GDGA + G +E+ N A Sbjct: 121 SPHDPFGAGHA--STSISAGLGMAVARDLAKEDYSVISVIGDGAISGGMSFEAINNAGHL 178 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTN---------FSKRGVSFNIPGM----------- 247 + I ++ +N A+ S S N F+KR I M Sbjct: 179 HTKFIVILNDNGMAISPSTGALSKFLNNVRFDPRFEFAKRNAKQTITNMPFGKAVWAFTK 238 Query: 248 -------------------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 VDG +IR ++A + +A + P++I M+T Sbjct: 239 SIKRKFEKSMLPGSLWEELGFIYLGPVDGHNIRELEAALKRAKDF---ESKPVLIHMITK 295 Query: 283 RYRGH 287 + +G+ Sbjct: 296 KGKGY 300 >gi|302764446|ref|XP_002965644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selaginella moellendorffii] gi|300166458|gb|EFJ33064.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selaginella moellendorffii] Length = 636 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH +G G G G +S G G+A A + Sbjct: 68 ILTGRRSRMHTLRQTDGICGFTKRSESEYDPFGAGHSSTTISAGLGMAVARDLQGKKNNV 127 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA GQ YE+ N A + N+I ++ +N+ Sbjct: 128 IAVIGDGAMTAGQAYEAMNNAGYLDTNMIVILNDNK 163 >gi|307726389|ref|YP_003909602.1| transketolase domain-containing protein [Burkholderia sp. CCGE1003] gi|307586914|gb|ADN60311.1| Transketolase domain-containing protein [Burkholderia sp. CCGE1003] Length = 287 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 3/112 (2%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + S F DG ++G ++E A+ Sbjct: 109 MASYTPGMEMSGGSLGHGLTIAVGRCLGLKRKGSKSFVYTLFSDGELDEGAIWEGIMSAS 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIR 255 W L N+I V++ NNQ A G S ++ A ++ +F +VDG DIR Sbjct: 169 HWKLDNLIAVVDVNNQQADGPS-TQIMAFEPLVEKLEAFGWFTQRVDGNDIR 219 >gi|169335771|ref|ZP_02862964.1| hypothetical protein ANASTE_02196 [Anaerofustis stercorihominis DSM 17244] gi|169258509|gb|EDS72475.1| hypothetical protein ANASTE_02196 [Anaerofustis stercorihominis DSM 17244] Length = 270 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 14/158 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + G+A NK D GDG +G ++E+ A+ + L N+I ++ Sbjct: 112 GSLGLGFPVAAGLALGNKLDGKDSTVYTLVGDGEIQEGTIWEAAMAASHYKLDNLIVYVD 171 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPI 275 NN + ++ + ++ +F + V DG D ++ ++A A C+ P Sbjct: 172 NNNLQIDGPITDVMSPYPIDEKFAAFGFNVINVDDGHDFDKLRKANEEAKA-CKGK--PS 228 Query: 276 IIEMLTYRYRGHSMSD---------PANYRTREEINEM 304 +I T + +G S + P+ + +E I E+ Sbjct: 229 VIICKTVKGKGVSFMENQVGWHGKAPSEEQAKEAIEEL 266 >gi|332856621|ref|ZP_08436230.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii 6013150] gi|332727014|gb|EGJ58504.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii 6013150] Length = 525 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 33/218 (15%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 L + +R T +D +D P + ++L +L+ + + LY G Sbjct: 2 LYTEIPTQRPVTPLLDAIDHP----------QQLRQLEHSQLLQVADELRQYI--LYAAG 49 Query: 77 MVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQ 133 GG +G + V + T D+++ ++ + H + LTGR+ Sbjct: 50 QSGGHFGANLGVVELTVALHYCFNTPNDRLVWDVGHQAYPHKI------------LTGRR 97 Query: 134 GGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCF-G 188 I+ + K G + + + G+ +S G G++ A +Y++ D VVC G Sbjct: 98 EQITTIRAKNGLAAFPAREESVFDTFGVGHSSTAISAGLGMSLARRYQK-DPCEVVCIVG 156 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 DGA G +E+ N A + ++I V+ +N ++ S Sbjct: 157 DGAMTAGMAFEAMNDAVAHDADLIVVLNDNDMSISCST 194 >gi|198415486|ref|XP_002120750.1| PREDICTED: similar to transketolase [Ciona intestinalis] Length = 633 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G ++L G+A+ KY V C GDG +G V+E+ A+ + L N + +I Sbjct: 131 GSLGQGLNLAVGMAYTGKYFDKASYRVFCLMGDGEMAEGAVWEAMAFASYYKLNNTVAII 190 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + N+ S ++ +R +F + VDG + Sbjct: 191 DVNRLGQSEPTSLGHDTDSYKRRAEAFGWNTIVVDGHSV 229 >gi|90406987|ref|ZP_01215177.1| putative 2-oxoglutarate dehydrogenase, E1 component [Psychromonas sp. CNPT3] gi|90311858|gb|EAS39953.1| putative 2-oxoglutarate dehydrogenase, E1 component [Psychromonas sp. CNPT3] Length = 935 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 5/166 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A + QG V E+FN++ V I ++ NNQ TS T + + Sbjct: 351 LPITVHGDSAISGQGVVQETFNMSQTRAFKVNGTIRIVINNQIGFTTSNPEDMRSTRYCT 410 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 P V+ D AV A+ + K ++I+++ YR GH+ +D N Sbjct: 411 DIAKMVQAPIFHVNSDDPEAVILATQIALDFRNTFKRDVVIDLVCYRRHGHNEADEPNAT 470 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 +++ + P E ++L G K++ + R ++N Sbjct: 471 QPLMYQKIKKHITPRELYARQLESEGVIKSGYAKQLVTDYRDALDN 516 >gi|260776539|ref|ZP_05885434.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio coralliilyticus ATCC BAA-450] gi|260607762|gb|EEX34027.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio coralliilyticus ATCC BAA-450] Length = 941 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS + T Sbjct: 350 STVLPITIHGDSAVAGQGVVAETFNMSQSRGFRVGGTVRIVVNNQVGFTTSNPNDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|260803195|ref|XP_002596476.1| hypothetical protein BRAFLDRAFT_130310 [Branchiostoma floridae] gi|229281733|gb|EEN52488.1| hypothetical protein BRAFLDRAFT_130310 [Branchiostoma floridae] Length = 1033 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 10/134 (7%) Query: 169 GIAFANKYRRSD-----KICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A +Y R D + ++ GD A A QG V+E+F+++ L I+V+ NNQ Sbjct: 386 GKTRAEQYYRGDIEGKKVMSILMHGDAAFAGQGVVFETFHLSDLPAYTTHGTIHVVVNNQ 445 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 T + + T + P V+ D AV + A + + ++I++ Sbjct: 446 IGFTTDPRFSRSSTYCTDVAKVVEAPIFHVNADDPEAVAHVCNVAADWRSEFEKDVVIDL 505 Query: 280 LTYRYRGHS-MSDP 292 + YR GH+ M +P Sbjct: 506 VCYRRGGHNEMDEP 519 >gi|153871343|ref|ZP_02000539.1| transketolase, N-terminal subunit [Beggiatoa sp. PS] gi|152072189|gb|EDN69459.1| transketolase, N-terminal subunit [Beggiatoa sp. PS] Length = 299 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 14/128 (10%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI--ENNQY- 220 +S+ G+A A + ++ V DG +GQ +E+ + + LN I +I N Q Sbjct: 147 LSMAAGVALARRLKKETGRVWVFMSDGELQEGQTWEALQVIRHYQLNNIAIIVDMNRQQC 206 Query: 221 --AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 AM T +S + + + +F ++VDG DI AV+ A + KG ++I Sbjct: 207 DGAMDTVLSLGA----IADKIAAFGAHVIEVDGHDILAVERA-----AKTQPEKGALVIL 257 Query: 279 MLTYRYRG 286 T Y+G Sbjct: 258 ANTNPYQG 265 >gi|254252529|ref|ZP_04945847.1| 2-oxoglutarate dehydrogenase complex [Burkholderia dolosa AUO158] gi|124895138|gb|EAY69018.1| 2-oxoglutarate dehydrogenase complex [Burkholderia dolosa AUO158] Length = 954 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D+ + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDEDGTQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLATQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|332982286|ref|YP_004463727.1| transketolase subunit A [Mahella australiensis 50-1 BON] gi|332699964|gb|AEE96905.1| transketolase subunit A [Mahella australiensis 50-1 BON] Length = 277 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + D GDG +G+V+E+ AA + L N+ ++ Sbjct: 118 GSLGQGISAANGMALAGKIDKKDYRVYALLGDGELEEGEVWEAAMTAAHYKLDNLTAFVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + ++ + ++ +F + ++G D+ + +AV +A KG P Sbjct: 178 HNHLQIDGFITDVKSPEPVDEKFKAFGWNVLCINGHDMNEIL----EAVEQAKATKGKPT 233 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 234 VIIAETVKGKGVSF 247 >gi|147898737|ref|NP_001083312.1| transketolase [Xenopus laevis] gi|37994581|gb|AAH60361.1| MGC68785 protein [Xenopus laevis] Length = 627 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 9/150 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ K+ V C GDG ++G V+E+ A + L N++ + Sbjct: 123 GSLGQGLGAACGMAYTGKFFDKASYRVFCLLGDGEVSEGSVWEAMAFAGFYKLDNLVAIF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+C P Sbjct: 183 DVNRLGQSDPAPLQHKVEVYQKRCEAFGWHSVVVDGHSVEEL------CKAFCHVKNQPT 236 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINEM 304 I T++ +G S + D N+ + E+ Sbjct: 237 AIIAKTFKGKGISGVEDKENWHGKPLPKEL 266 >gi|21107714|gb|AAM36404.1| oxoglutarate dehydrogenase [Xanthomonas axonopodis pv. citri str. 306] Length = 967 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 14/138 (10%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 F + R+S + ++ GD A A QG V E F ++ V ++++ NNQ TS + Sbjct: 368 FGDAERKS-VLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVVNNQIGFTTS-T 425 Query: 228 RASAQTNFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R A++ V+ I P V+G D AV A + + K ++I+++ YR Sbjct: 426 RDDARSTLYCTDVAKMIGAPVFHVNGDDPDAVMFVSKLAYEFRQQFKKDVVIDLVCYRRW 485 Query: 286 GHSMSD------PANYRT 297 GH+ +D P Y+T Sbjct: 486 GHNEADEPAATQPVMYQT 503 >gi|33861464|ref|NP_893025.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|41016947|sp|Q7V1G6|DXS_PROMP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|33634041|emb|CAE19366.1| 1-deoxy-D-xylulose 5-phosphate synthase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 637 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 58/153 (37%), Gaps = 14/153 (9%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYV 214 G G +S G+A A + D CV GDGA G E+ N A L N ++ V Sbjct: 111 GAGHASTSISAALGMAIARDRKGEDHKCVAVIGDGALTGGMALEAINHAGHLPNTPLVVV 170 Query: 215 IENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + +N ++ V R S F V ++ + + G DI + +V Sbjct: 171 LNDNDMSISPPVGALSTYLNRVRLSPPLQFLSDSVQESVKNIPLIGKDIPEELKNIKGSV 230 Query: 266 AYCRAHKGPIIIEMLTYRY----RGHSMSDPAN 294 K + E L + Y GH +S+ N Sbjct: 231 RRLAVPKVGAVFEELGFTYMGPIDGHDISNLIN 263 >gi|195394572|ref|XP_002055916.1| GJ10508 [Drosophila virilis] gi|194142625|gb|EDW59028.1| GJ10508 [Drosophila virilis] Length = 926 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG E ++A + + V +++I NNQ T R + S Sbjct: 333 LNVILHGDAAFAGQGINQECLHMAYVPHFEVGGSLHLIVNNQVGFTTPGERGRSTEYASD 392 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 S P V+G D A+ + A Y R I I++ YR GH+ + DP Sbjct: 393 LAKSIQAPVFHVNGDDPEALARITNLAFRYQREFHKDIFIDLNCYRRWGHNELDDP 448 >gi|161524920|ref|YP_001579932.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia multivorans ATCC 17616] gi|189350330|ref|YP_001945958.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia multivorans ATCC 17616] gi|160342349|gb|ABX15435.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia multivorans ATCC 17616] gi|189334352|dbj|BAG43422.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia multivorans ATCC 17616] Length = 954 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D+ + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDEDGAQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLATQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|121610224|ref|YP_998031.1| 1-deoxy-D-xylulose-5-phosphate synthase [Verminephrobacter eiseniae EF01-2] gi|166201545|sp|A1WN06|DXS_VEREI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|121554864|gb|ABM59013.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Verminephrobacter eiseniae EF01-2] Length = 631 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 56/241 (23%), Positives = 91/241 (37%), Gaps = 69/241 (28%) Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 T +++T RE H L +QGGIS G S + F H Sbjct: 80 TYAHKILTGRRERMHTLR--------------QQGGIS---GFPQRGESVYDTFGTAHS- 121 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 +S G+A A K + + V GDGA + G +E+ N A + + N++ V+ +N Sbjct: 122 -STSISAALGMALAAKRKGESRHTVAIIGDGAMSAGMAFEALNNAGVADCNLLVVLNDND 180 Query: 220 ----------------------YA----MGTSVSRA-SAQTNFSKR-------------- 238 YA MG +V R F+KR Sbjct: 181 MSISPPVGALNRYLAQLMSGRFYAAAKNMGKTVLRPMPPLLEFAKRFEQQAKGLVVPATL 240 Query: 239 --GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPAN 294 FN G +DG D+ ++ T+D + +GP + ++T + +G+ + +DP Sbjct: 241 FEKFGFNYIG-PIDGHDLDSLIPTLDN----IKGLQGPQFLHVVTKKGQGYKLAEADPVA 295 Query: 295 Y 295 Y Sbjct: 296 Y 296 >gi|300310439|ref|YP_003774531.1| transketolase alpha subunit [Herbaspirillum seropedicae SmR1] gi|300073224|gb|ADJ62623.1| transketolase alpha subunit protein [Herbaspirillum seropedicae SmR1] Length = 281 Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 98/240 (40%), Gaps = 23/240 (9%) Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITA-- 108 SAYR IRR + G++ G G +G G+ + AV MSL D + Sbjct: 11 SAYR----IRRNAVRMGEVQGQGYIGQALGWADVL----AVAYKHAMSLRPDDPQWSGRD 62 Query: 109 --YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH----GIVGA 162 HGH A + A+ I A + + S G S S + G G +G Sbjct: 63 RFLLSHGHY-AIALYAALIEAGIVPDEELDSYGSDDSRLPMSGMATYTPGMEISGGSLGQ 121 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQY 220 +++G G+A +Y + DG ++G +E+ AA L N+I +++ NNQ Sbjct: 122 GLAIGVGMALGLRYNNNPAFVYNSMSDGELDEGSTWEAAMGAAHHQLGNLICLVDINNQQ 181 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A G S + + + +F +VDG D+ AV D A A I+ + L Sbjct: 182 ADGPS-GKIMGFEPLADKWAAFGWYVQRVDGNDLAAVVQAFDNARNLKDAKPRVILFDTL 240 >gi|328885013|emb|CCA58252.1| Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex or 2-oxoglutarate dehydrogenase E1 component [Streptomyces venezuelae ATCC 10712] Length = 1266 Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++++ NNQ +G + + S++++ Sbjct: 681 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHIVINNQ--VGFTAAPESSRSSMYA 738 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 V+ I P V+G D AV A + + ++I+++ YR RGH+ D + Sbjct: 739 TDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQTFNKDVVIDLICYRRRGHNEGDNPQF 798 Query: 296 RTREEIN 302 + N Sbjct: 799 TNPQMYN 805 >gi|282890647|ref|ZP_06299170.1| hypothetical protein pah_c022o270 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499644|gb|EFB41940.1| hypothetical protein pah_c022o270 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 924 Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 6/145 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + ++ GD A + QG YE+ + L + I+V+ NNQ T++ R S T++ + Sbjct: 345 LPILVHGDAAISGQGVCYETMQMYDLPGYSTGGTIHVVINNQIGF-TTLPRDSRSTHYCT 403 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 +F P V+ D A AV + ++ + I++ YR GH+ +D Y Sbjct: 404 DIARTFRAPVFHVNAEDPEACVYATLLAVQLRQKYRCDVFIDLNCYRKFGHNETDEPAYT 463 Query: 297 TREEINEMRSNHDPIEQVRKRLLHN 321 + +R E R L+H Sbjct: 464 QPYQYQLIRQKKPIRELYRDNLIHQ 488 >gi|221197767|ref|ZP_03570813.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia multivorans CGD2M] gi|221204675|ref|ZP_03577692.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia multivorans CGD2] gi|221213152|ref|ZP_03586128.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia multivorans CGD1] gi|221167365|gb|EED99835.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia multivorans CGD1] gi|221175532|gb|EEE07962.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia multivorans CGD2] gi|221181699|gb|EEE14100.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia multivorans CGD2M] Length = 954 Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D+ + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDEDGAQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLATQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|85704852|ref|ZP_01035953.1| putative transketolase alpha subunit protein [Roseovarius sp. 217] gi|85670670|gb|EAQ25530.1| putative transketolase alpha subunit protein [Roseovarius sp. 217] Length = 268 Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 3/109 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A K +++ DG +G +E+ A W L N+I +++ Sbjct: 108 GSLGQGLGIAVGMALGLKRKKNPAYVYNLMSDGELGEGSTWEAVMSATQWKLDNLICIVD 167 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NNQ A G S A A + + +F +VDG D+ A+ A D A Sbjct: 168 FNNQQADGPS-RDALAVGAEAPKWQAFGWHAQEVDGNDLSALTAAFDVA 215 >gi|307267476|ref|ZP_07548962.1| Transketolase domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306917512|gb|EFN47800.1| Transketolase domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 173 Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + GDG +GQ++E+ AA + L N+ +++ Sbjct: 15 GSLGQGLSAANGMALAGKLDKKGYRVYAILGDGELQEGQIWEAAMTAAHYKLDNLTAILD 74 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + +++ +F +++DG D + DKA+ +A KG P Sbjct: 75 FNGLQIDGPNREVKNIEPVNEKFKAFGWHVIEIDGHDFDQI----DKAIEEAKATKGKPT 130 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 131 LIIAHTIKGKGVSF 144 >gi|293401930|ref|ZP_06646070.1| transketolase, N- subunit [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304588|gb|EFE45837.1| transketolase, N- subunit [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 274 Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 75/163 (46%), Gaps = 18/163 (11%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A +NKY GDG +G+V+E+ AA + L N++ ++ Sbjct: 116 GSLGQGISTAVGMALSNKYHELPYRVYTLLGDGECQEGEVWEAAMAAAHYKLDNLLAFVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSF--NIPGMQVDGMDIRAVKATMDKAVAYCRAHKG- 273 NN + +S + ++ +F N+ ++ DG D+ +V ++A + KG Sbjct: 176 NNGLQIDGKISDVMNPSPIDEKFKAFGWNVITLE-DGNDLASVIEACEEA----KTVKGK 230 Query: 274 PIIIEMLTYRYRGHSMSD---------PANYRTREEINEMRSN 307 P ++ T + +G S + P+ + ++ + E+ N Sbjct: 231 PTVVVAKTVKGKGVSFMENQAGWHGVAPSAQQCQDALKELEGN 273 >gi|126734825|ref|ZP_01750571.1| 2-oxoglutarate dehydrogenase, E1 component [Roseobacter sp. CCS2] gi|126715380|gb|EBA12245.1| 2-oxoglutarate dehydrogenase, E1 component [Roseobacter sp. CCS2] Length = 985 Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust. Identities = 34/172 (19%), Positives = 74/172 (43%), Gaps = 4/172 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + V+ GD A A QG V E F ++ L ++++ NNQ T+ + + Sbjct: 381 RTRVMGVLLHGDAAFAGQGVVAEGFGLSGLKGHRTGGTMHIVVNNQIGFTTAPHFSRSSP 440 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+G D AV A + + ++++++ YR GH+ D Sbjct: 441 YPTDIALMVEAPIFHVNGDDPEAVVHAARVATEFRQKFHKDVVLDIICYRRFGHNEGDEP 500 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + +++ + +RL+ + EG++++++ + +N E Sbjct: 501 MFTNPVMYKKIKKQKTTLTLYTERLVSDGLIPEGEIEDMKAAFQAHLNEEFE 552 >gi|197099240|ref|NP_001126993.1| transketolase [Pongo abelii] gi|75054695|sp|Q5R4C1|TKT_PONAB RecName: Full=Transketolase; Short=TK gi|55733430|emb|CAH93395.1| hypothetical protein [Pongo abelii] Length = 623 Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 123 GSLGQGLGVACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSDPAPLQHQMDIYQKRCEAFGWHAVIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|319794374|ref|YP_004156014.1| 2-oxoglutarate dehydrogenase, e1 subunit [Variovorax paradoxus EPS] gi|315596837|gb|ADU37903.1| 2-oxoglutarate dehydrogenase, E1 subunit [Variovorax paradoxus EPS] Length = 958 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 10/125 (8%) Query: 177 RRSDKI-----CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 RR+D + V+ GD A A QG V E+ +A + ++++ NNQ TS Sbjct: 353 RRADPLGKQVLPVIVHGDAAFAGQGVVMETLALAETRGYSTGGTVHIVINNQIGFTTSDP 412 Query: 228 RASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S T + V + P + V+G D AV A+ + + ++++++ +R G Sbjct: 413 RDSRSTLYCTDIVKMVDAPVLHVNGDDPEAVVLATQLALEFRMEFQKDVVVDIICFRKLG 472 Query: 287 HSMSD 291 H+ D Sbjct: 473 HNEQD 477 >gi|295691151|ref|YP_003594844.1| 2-oxoglutarate dehydrogenase E1 subunit [Caulobacter segnis ATCC 21756] gi|295433054|gb|ADG12226.1| 2-oxoglutarate dehydrogenase, E1 subunit [Caulobacter segnis ATCC 21756] Length = 987 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 4/118 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L I+ I NNQ TS + + Sbjct: 386 RGHVLPLLLHGDAAFAGQGVVAECFTLSGLKGYRTGGTIHFIVNNQIGFTTSPRYSRSSP 445 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 S + P V+G D AV + Y + ++I+M YR GH+ D Sbjct: 446 YPSDVALMVEAPIFHVNGDDPEAVVFASKVSTEYRQKFGKDVVIDMFCYRRFGHNEGD 503 >gi|167587330|ref|ZP_02379718.1| alpha-ketoglutarate decarboxylase [Burkholderia ubonensis Bu] Length = 954 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D+ + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDEDGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVILATQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|88811364|ref|ZP_01126619.1| 2-oxoglutarate dehydrogenase, E1 component [Nitrococcus mobilis Nb-231] gi|88791253|gb|EAR22365.1| 2-oxoglutarate dehydrogenase, E1 component [Nitrococcus mobilis Nb-231] Length = 940 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 9/167 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+F ++ + +++I NNQ TS + +++F Sbjct: 356 LSVLIHGDAAFAGQGVVMETFQLSQARGFYTGGTVHIIINNQIGFTTS-NPLDIRSSFYC 414 Query: 238 RGVS--FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 V+ P V+ D V A+ Y +K ++I+++ YR GH+ +D + Sbjct: 415 TEVAKIVQAPIFHVNSDDPETVIFVTQLALDYREKYKRDVVIDLVCYRRHGHNEADEPS- 473 Query: 296 RTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIIN 341 T+ + + H P+ Q+ +RL E ++++++ + R ++ Sbjct: 474 ATQPIMYQKIKQHPPVCQLYAERLCDEGIIGEEEIQQMQHSYRDALD 520 >gi|172057716|ref|YP_001814176.1| 2-oxoglutarate dehydrogenase E1 component [Exiguobacterium sibiricum 255-15] gi|171990237|gb|ACB61159.1| 2-oxoglutarate dehydrogenase, E1 subunit [Exiguobacterium sibiricum 255-15] Length = 953 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 8/169 (4%) Query: 183 CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ GD A QG V E+ N+ L N I++I NN T + + + S Sbjct: 353 AILIHGDAAFPGQGIVAETLNLTNLKGYNTGGTIHIIANNTIGFTTEPTDSRSTRYSSDL 412 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYRT 297 + IP V+ + + A A Y ++I+++ YR GH+ M +P N T Sbjct: 413 AKGYEIPIFHVNADEPESCLAVALLASEYRATFNKDVLIDLIGYRRFGHNEMDEPMN--T 470 Query: 298 REEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 + ++ HD + K+L+ ++ D+ IE ++ ++ + E Sbjct: 471 NPVLYDLIHKHDSARVLYAKQLVEQNDVTKEDVTTIETDINDMMKAARE 519 >gi|154250192|ref|YP_001411017.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fervidobacterium nodosum Rt17-B1] gi|154154128|gb|ABS61360.1| deoxyxylulose-5-phosphate synthase [Fervidobacterium nodosum Rt17-B1] Length = 631 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 46/189 (24%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G VG ++ GI A + + VV GDGA GQ E+ N N + ++ Sbjct: 113 GAGHVGTSIAAALGIEKALNLSKKEANVVVVIGDGALTSGQALEALNQVKSQNSKIKIIL 172 Query: 216 ENNQYAM-----GTSVSRASAQTN-----FSKR-------GVSFNIPGMQ---------- 248 +N ++ G S+ S +T+ +R GV F + ++ Sbjct: 173 NSNGMSIAKNVGGLSILLESLRTSKLYITLKERIKKGMNEGVEFELKKIKEALKVALVGE 232 Query: 249 -------------VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG--HSMSDPA 293 +DG DIR T+++A+ +A+ P ++ + T + +G +S ++P Sbjct: 233 DFFESIGLKHFGPIDGHDIR----TLEEALKQIKAYPYPTVLTVFTTKGKGYHYSEANPT 288 Query: 294 NYRTREEIN 302 Y E+ + Sbjct: 289 KYHGVEKFD 297 >gi|194334181|ref|YP_002016041.1| transketolase domain-containing protein [Prosthecochloris aestuarii DSM 271] gi|194311999|gb|ACF46394.1| Transketolase domain protein [Prosthecochloris aestuarii DSM 271] Length = 303 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 7/147 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G A K D GDG +GQ++E+ A + L N+I +++ Sbjct: 136 GSLGQGLSAAVGAALGVKMDNRDADVFCLMGDGECQEGQIWEAAMSATHYGLDNLIGIVD 195 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + V F + +F DG DI A+ +T+++ + +A GP + Sbjct: 196 YNKLQIDGEVCDVMCVEPFGDKWKAFGWDVYHCDGNDIDALVSTVEEIRSREQA-VGPAV 254 Query: 277 IEMLTYRYRGHS-----MSDPANYRTR 298 I T +G M D +N+ + Sbjct: 255 ILASTVMGKGVPFFEGVMPDKSNWHGK 281 >gi|118595180|ref|ZP_01552527.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophilales bacterium HTCC2181] gi|118440958|gb|EAV47585.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophilales bacterium HTCC2181] Length = 613 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 20/140 (14%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH KNG G G G +S G+A A + R+S Sbjct: 80 IITGRKHEMHTLRRKNGLSGFPRRSESMYDEFGTGHSSTSISAALGMAEALRKRKSKNKA 139 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + GDGA G +E N + + N++ ++ +N ++ +V A N+ + +S Sbjct: 140 IAIIGDGAMTAGMAFEGLNHSGSTDNNILVILNDNDMSISKNV---GALNNYLAKLLS-- 194 Query: 244 IPGMQVDGMDIRAVKATMDK 263 G DG+ R+ KA K Sbjct: 195 --GRVYDGLK-RSGKAVFSK 211 >gi|193214913|ref|YP_001996112.1| transketolase domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193088390|gb|ACF13665.1| Transketolase domain protein [Chloroherpeton thalassium ATCC 35110] Length = 305 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 9/144 (6%) Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQ 219 G ++G ++F + + C++ GDG +GQ++E+ AA + N+I ++++N Sbjct: 143 GLSAAIGAALSFKTDGKPNTVYCMM--GDGECQEGQIWEAAMSAAHFKTDNLIGIVDHNN 200 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 + V F+ + +F + DG I T++KA + K P++I Sbjct: 201 QQIDGEVEAVMGLEPFADKWKAFGWEVLSCDGNSIADFVQTVEKAKTFSGKGK-PVVILA 259 Query: 280 LTYRYRG-----HSMSDPANYRTR 298 T +G SM+D +N+ + Sbjct: 260 KTLMGKGVSFMEGSMADGSNWHGK 283 >gi|114051183|ref|NP_001039490.1| transketolase-like protein 2 [Bos taurus] gi|122145992|sp|Q2NKZ4|TKTL2_BOVIN RecName: Full=Transketolase-like protein 2 gi|84708735|gb|AAI11321.1| Transketolase-like 2 [Bos taurus] gi|296486843|gb|DAA28956.1| transketolase-like 2 [Bos taurus] Length = 626 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+ A+ + L N++ V Sbjct: 123 GSLGQGLGAACGMAYTGKYLDKASYRVFCLLGDGESSEGSVWEALAFASHYGLDNLVAVF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + R +F VDG D+ A+ +A + P Sbjct: 183 DVNRLGQSGVAPLKHCTDIYRNRCEAFGWNTYLVDGHDVEALCQAFSQAA---QGKNKPT 239 Query: 276 IIEMLTYRYRG 286 I TY+ RG Sbjct: 240 AIIAKTYKGRG 250 >gi|322617086|gb|EFY13992.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617608|gb|EFY14507.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624762|gb|EFY21591.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630311|gb|EFY27081.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634492|gb|EFY31225.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639202|gb|EFY35894.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640066|gb|EFY36733.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645714|gb|EFY42238.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652079|gb|EFY48442.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656251|gb|EFY52548.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659402|gb|EFY55649.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665862|gb|EFY62045.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669898|gb|EFY66039.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673884|gb|EFY69981.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678642|gb|EFY74698.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683562|gb|EFY79576.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687638|gb|EFY83608.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193528|gb|EFZ78733.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198434|gb|EFZ83536.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204546|gb|EFZ89549.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208515|gb|EFZ93454.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210802|gb|EFZ95676.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218312|gb|EGA03022.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222933|gb|EGA07282.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224492|gb|EGA08774.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232307|gb|EGA16410.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235659|gb|EGA19743.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241180|gb|EGA25216.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244922|gb|EGA28924.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250041|gb|EGA33935.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253826|gb|EGA37651.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323254964|gb|EGA38755.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260344|gb|EGA43963.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264128|gb|EGA47635.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270827|gb|EGA54265.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 276 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 5/107 (4%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKI-CVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K RRS+++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLARRSNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 I+ N+ + + + + +F + V G DI + A + Sbjct: 173 IDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAVV 219 >gi|313892031|ref|ZP_07825631.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Dialister microaerophilus UPII 345-E] gi|313119545|gb|EFR42737.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Dialister microaerophilus UPII 345-E] Length = 584 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +SL G+A A R SD+ V GDG+ + GQ ES +IA N I Sbjct: 110 FTIGH--TSTSLSLALGLAKARDMRGSDENVVAIIGDGSLSGGQALESLSIAGELGTNFI 167 Query: 213 YVIENN 218 ++ +N Sbjct: 168 MIVNDN 173 >gi|299134745|ref|ZP_07027937.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2] gi|298590555|gb|EFI50758.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2] Length = 638 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +GG + F + + F H +S G G+A A ++ + Sbjct: 87 LTGRRDRIRTLRQGGGLSGFPKRAESEYDAFGTAHS--STSISAGLGMAVARDLQQGNNN 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A N +I ++ +N ++ V SA Sbjct: 145 VIAVIGDGSMSAGMAYEAMNNAGALNSRLIVILNDNDMSIAPPVGAMSA 193 >gi|238027576|ref|YP_002911807.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia glumae BGR1] gi|237876770|gb|ACR29103.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia glumae BGR1] Length = 955 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 340 GSAKARMDRRGDADGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 399 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV + A+ Y ++I+ Sbjct: 400 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAVQIAIDYRMQFHKDVVID 459 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 460 IVCFRKLGHNEQDTPA 475 >gi|4185881|emb|CAA07554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chlamydomonas reinhardtii] Length = 735 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 35/201 (17%) Query: 28 TSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIG 87 T +D V+ P + FN EQ L L + E ++ ++ + GG +G Sbjct: 79 TPLLDTVNYPV----HLKNFNNEQ------LKQLCK--ELRSDIVHTVSRTGGHLSSSLG 126 Query: 88 QEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGISKGK---- 140 + V M T D++I ++ +GH + LTGR+ G++ + Sbjct: 127 VVELTVAMHYVFNTPEDKIIWDVGHQAYGHKI------------LTGRRKGMATIRQTNG 174 Query: 141 --GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 G + S + F GH +LG + K +++ I V+ GDGA G Y Sbjct: 175 LSGFTKRDESEYDPFGAGHSSTSISAALGMAVGRDVKGKKNSVIAVI--GDGAITGGMAY 232 Query: 199 ESFNIAALWNLNVIYVIENNQ 219 E+ N A + N+I ++ +NQ Sbjct: 233 EAMNHAGFLDKNMIVILNDNQ 253 >gi|218662337|ref|ZP_03518267.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium etli IE4771] Length = 386 Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust. Identities = 19/69 (27%), Positives = 34/69 (49%) Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 +S G G+A A ++D+ + GDGA + G YE+ N A + +I ++ +N ++ Sbjct: 43 SISAGLGMAIAADLDKTDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSI 102 Query: 223 GTSVSRASA 231 SA Sbjct: 103 APPTGAMSA 111 >gi|242043226|ref|XP_002459484.1| hypothetical protein SORBIDRAFT_02g005380 [Sorghum bicolor] gi|241922861|gb|EER96005.1| hypothetical protein SORBIDRAFT_02g005380 [Sorghum bicolor] Length = 730 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 25/203 (12%) Query: 21 VSAKRAATSSVDCVDIPF-LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 S ++ AT +D V+ P ++ SE ++L+A E +A ++ + G Sbjct: 78 TSGEKPATPLLDTVNYPLHMKNLSTSEL---EQLAA----------ELRAEIVHTVSKTG 124 Query: 80 GFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGI 136 G +G + V + T D++I ++ +GH + G + T G Sbjct: 125 GHLSSSLGVVELSVALHHVFDTPDDKIIWDVGHQAYGHKILTGRRSRMHTIRQTSGLAGF 184 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 K + S H + F GH +LG +A R++ + V+ GDGA GQ Sbjct: 185 PK-RDESAH-----DAFGVGHSSTSISAALGMAVARDLLGRKNHVVSVI--GDGAMTAGQ 236 Query: 197 VYESFNIAALWNLNVIYVIENNQ 219 YE+ N + + N+I V+ +N+ Sbjct: 237 AYEAMNNSGFLDANMIVVLNDNK 259 >gi|190570939|ref|YP_001975297.1| 2-oxoglutarate dehydrogenase, E1 component [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019454|ref|ZP_03335260.1| 2-oxoglutarate dehydrogenase, E1 component [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357211|emb|CAQ54628.1| 2-oxoglutarate dehydrogenase, E1 component [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994876|gb|EEB55518.1| 2-oxoglutarate dehydrogenase, E1 component [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 889 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 8/114 (7%) Query: 188 GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 GD A QG V E+ ++ + V ++++ NNQ +G + + A+++F V+ + Sbjct: 298 GDAAFIGQGVVAETLTLSNIEGYKVGGIVHIVINNQ--VGFTANPNCARSSFYCTDVAKS 355 Query: 244 I--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 I P V+G + AV + A+ Y + K ++I+++ YR GH+ D N+ Sbjct: 356 IEAPIFHVNGDNPEAVSFVANLAMEYVQKFKKDVVIDIICYRKYGHNEGDEPNF 409 >gi|149911921|ref|ZP_01900520.1| putative 2-oxoglutarate dehydrogenase, E1 component [Moritella sp. PE36] gi|149805014|gb|EDM65042.1| putative 2-oxoglutarate dehydrogenase, E1 component [Moritella sp. PE36] Length = 937 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 76/193 (39%), Gaps = 20/193 (10%) Query: 119 GVDASKIMAELTGRQG-----GISKGKGGSMHMFSTKNG-------FYGGHGIVGAQVSL 166 G + + E G+ G G K G FST G F H + V + Sbjct: 274 GKKPNDLFDEFAGKHGDAWGAGDVKYHQGFSSDFSTPGGNVHLALAFNPSHLEIVNPVVM 333 Query: 167 GTGIAFANKYRRS---DKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G+ A +Y + D + + GD A QG V E+FN++ + I ++ NNQ Sbjct: 334 GSVRARQERYGSTNGDDVLAITIHGDSAITGQGVVAETFNMSQTRAYGIGGTIRIVVNNQ 393 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS + T + + P V+ D AV A+ + K ++I+ Sbjct: 394 VGFTTSNPKDMRSTEYCTDIAKMVQAPIFHVNADDPEAVVLVTQIALDFRNTFKRDVVID 453 Query: 279 MLTYRYRGHSMSD 291 ++ YR GH+ +D Sbjct: 454 LVCYRRHGHNEAD 466 >gi|189500056|ref|YP_001959526.1| Transketolase domain-containing protein [Chlorobium phaeobacteroides BS1] gi|189495497|gb|ACE04045.1| Transketolase domain protein [Chlorobium phaeobacteroides BS1] Length = 303 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 13/151 (8%) Query: 158 GIVGAQVSLGTGIAFA-----NKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-N 210 GI A SLG G++ A K D V C GDG +GQ++E+ A+ + L N Sbjct: 130 GIHIASGSLGQGLSAAVGAALGKNIDGDSGDVFCLMGDGECQEGQIWEAAMSASHYGLGN 189 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 ++ +++ N + V F+ + +F +Q DG DI V A +K + Sbjct: 190 LVGIVDCNNQQIDGEVHDVMNIEPFADKWRAFGWNVLQCDGNDIEDVIAVTEK-IRSAEV 248 Query: 271 HKGPIIIEMLTYRYRG-----HSMSDPANYR 296 GP +I +T +G +M D N+ Sbjct: 249 RTGPSVILAVTVMGKGVPFFEGTMPDNTNWH 279 >gi|332678931|gb|AEE88060.1| 2-oxoglutarate dehydrogenase E1 component [Francisella cf. novicida Fx1] Length = 937 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 10/121 (8%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTS----VSRAS 230 S + ++ GD A QG V E+F + A I+++ NNQ TS V+R+S Sbjct: 347 SKVLPILIHGDSAFCGQGVVMETFGFSLTEAYGTGGTIHLVVNNQVGFTTSSAFGVNRSS 406 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + V + P V+G D AV D A+ Y ++I+++ YR GH+ + Sbjct: 407 NYSTDVAKMV--DAPIFHVNGDDPEAVLKVTDIALEYRMKFNKDVVIDLVCYRRNGHNET 464 Query: 291 D 291 D Sbjct: 465 D 465 >gi|289642674|ref|ZP_06474814.1| Transketolase central region [Frankia symbiont of Datisca glomerata] gi|289507504|gb|EFD28463.1| Transketolase central region [Frankia symbiont of Datisca glomerata] Length = 625 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 8/134 (5%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +G + G+A A ++ R ++ V+C GD +G V+E+ + A+ + L N+ + Sbjct: 127 GSLGQGLPDAVGVALAGRFLDRLPYRVWVLC-GDSEMTEGSVWEALDKASYYQLSNLTAI 185 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ++ N+ +++R +F + VDG D+ A+ + +A R P Sbjct: 186 VDVNRLGQRGPTELGWDLDTYARRVEAFGCRALAVDGHDVAALDEVLTEASGSDR----P 241 Query: 275 IIIEMLTYRYRGHS 288 +++ T + G S Sbjct: 242 VVVLARTRKGEGFS 255 >gi|251779426|ref|ZP_04822346.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083741|gb|EES49631.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 274 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 9/125 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + GDG +GQV+E+ AA + L N+ ++ Sbjct: 117 GSLGQGISAAVGMALAGKLDNRNYRVYTILGDGELEEGQVWEASMSAAHYKLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA--------VAYC 268 N + ++S K+ +F + +DG D + A ++KA V C Sbjct: 177 YNGLQIDGNISDVMNPAPIDKKFEAFGWNTLIIDGHDYDQILAAIEKAKNTKGQPTVIVC 236 Query: 269 RAHKG 273 + KG Sbjct: 237 KTVKG 241 >gi|238928040|ref|ZP_04659800.1| transketolase [Selenomonas flueggei ATCC 43531] gi|238884000|gb|EEQ47638.1| transketolase [Selenomonas flueggei ATCC 43531] Length = 274 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 17/158 (10%) Query: 147 FSTKNGFYGGH------GIVGAQVSLGTGIAFANKYRRSDKI------CVVCFGDGAANQ 194 F +N GGH GI A +LG GI FA + K+ V GDG + + Sbjct: 89 FYQRNTRLGGHPDIALPGIETATGALGHGICFATGTALAAKVDGRSYRTYVVMGDGESQE 148 Query: 195 GQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 G V+E+ AA L N+ V++ N + S+ + SF ++ G D Sbjct: 149 GSVWEAAAFAANQGLSNMTVVMDCNGLQASAYIEDISSIEPLKAKWESFGWTVLECSGHD 208 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + + ++A +A + P +I T + +G S+++ Sbjct: 209 FSELIQSFERA----KATERPTMILARTIKGKGVSLAE 242 >gi|212635736|ref|YP_002312261.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella piezotolerans WP3] gi|212557220|gb|ACJ29674.1| 2-oxoglutarate dehydrogenase, E1 component [Shewanella piezotolerans WP3] Length = 940 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 37/229 (16%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILA--CGVDASKIMAELTGRQGGISKGKG--- 141 G + V++GM A+R ++L G S++ E G+ G G Sbjct: 257 GTKEVVIGM------------AHRGRLNVLVNILGKKPSELFDEFAGKHSDALNGSGDVK 304 Query: 142 ---GSMHMFSTKNG-------FYGGHGIVGAQVSLGTGIAFANKYRRSDK----ICVVCF 187 G F T G F H + V +G+ A ++ R+ D + + Sbjct: 305 YHQGFSSDFETPGGNVHLALAFNPSHLEIVNPVVIGSVRARLDR-RQCDTGLQVMPITIH 363 Query: 188 GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSF 242 GD A QG V E+FN++ V I ++ NNQ T+++ T + + Sbjct: 364 GDSAITGQGIVQETFNMSQTRGFKVGGSIRIVVNNQVGFTTNLTEDVRSTEYCTDIAKMV 423 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV AV Y K ++I+++ YR GH+ +D Sbjct: 424 QAPIFHVNADDPEAVAFVSQLAVDYRNEFKRDVVIDLVCYRRHGHNEAD 472 >gi|120610695|ref|YP_970373.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax citrulli AAC00-1] gi|166198591|sp|A1TNR1|DXS_ACIAC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|120589159|gb|ABM32599.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax citrulli AAC00-1] Length = 622 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 33/63 (52%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G+A A + R D+ V GDGA G +E+ N A + + N++ ++ +N ++ Sbjct: 125 ISAALGMAMAARQRGEDRRAVAIIGDGAMTAGMAFEALNNAGVADANLLVILNDNDMSIS 184 Query: 224 TSV 226 V Sbjct: 185 PPV 187 >gi|304312211|ref|YP_003811809.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium HdN1] gi|301797944|emb|CBL46166.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium HdN1] Length = 639 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 25/206 (12%) Query: 25 RAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 R AT +D +D P + E S +L +R++ LY +G GG Sbjct: 10 RPATPLLDQIDSP-------ARLRALSEDSLPQLADEMRQY-----LLYSVGKTGGHFSS 57 Query: 85 CIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQ-GGISKGK 140 +G + + + T DQ+I ++ + H L G + A L+ RQ G++ Sbjct: 58 GLGVIELTIALHYVYNTPNDQLIWDVGHQAYPHKLLTG----RREALLSIRQRHGLA--- 110 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 G S + F GH +LG IA A + +R D++ V GDGA G +E+ Sbjct: 111 GFPKRDESPFDAFGVGHSSTSISAALGMSIALAMQ-KREDQV-VAIIGDGAITAGMAFEA 168 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSV 226 N A + N++ V+ +N ++ +V Sbjct: 169 LNHAGHTHSNMLVVLNDNDMSISENV 194 >gi|294614100|ref|ZP_06694025.1| 1-deoxy-d-xylulose-5-phosphate synthase [Enterococcus faecium E1636] gi|291593046|gb|EFF24630.1| 1-deoxy-d-xylulose-5-phosphate synthase [Enterococcus faecium E1636] Length = 587 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 7/95 (7%) Query: 129 LTGRQGGISKG-----KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 LTGR+ G KG G S S + F GH +SL TG+A A ++ Sbjct: 85 LTGRKNGFEKGHYREVSGYSNQHESKHDYFTVGH--TSTSISLATGLAKARDLKKESGNV 142 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 V GDG+ + G +E N N+I ++ +N Sbjct: 143 VAFIGDGSLSGGLAFEGLNNGGALQSNLIVLVNDN 177 >gi|86140811|ref|ZP_01059370.1| 2-oxoglutarate dehydrogenase, E1 component [Leeuwenhoekiella blandensis MED217] gi|85832753|gb|EAQ51202.1| 2-oxoglutarate dehydrogenase, E1 component [Leeuwenhoekiella blandensis MED217] Length = 922 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 6/157 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAAL---WNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + +V GD A A QG VYE +A L I+++ NNQ T+ A + T + Sbjct: 335 LPIVVHGDAAIAGQGVVYEVIQMAQLDGYTTKGTIHIVINNQIGFTTNYLDARSSTYCTD 394 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + P + V+ D AV A+ + + I++L YR GH+ D + T Sbjct: 395 VAKTTLSPVLHVNADDAEAVVHAALFALDFRMTFGRDVFIDLLGYRKYGHNEGDEPRF-T 453 Query: 298 REEINEMRSNHDPIEQVR-KRLLHNKWASEGDLKEIE 333 + ++ + + HD + K+L+ + +K++E Sbjct: 454 QPKLYKAIAKHDNARDIYAKKLIEEGVIDDSYVKQLE 490 >gi|315924832|ref|ZP_07921049.1| exopolyphosphatase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621731|gb|EFV01695.1| exopolyphosphatase [Pseudoramibacter alactolyticus ATCC 23263] Length = 290 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 1/113 (0%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G +++ G+A + K R+ V GDG +G +E+ AA + L N Sbjct: 116 GIEANTGALGHGLAIANGMAASAKLRKDKSRVFVVMGDGELPEGSNWEAAAQAAKFKLDN 175 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 +I ++ N + SV + SF ++DG D+R + + K Sbjct: 176 LILFVDYNGLQISGSVENVLNMQPVMAKFESFGWAAHEIDGHDVRQILDVLKK 228 >gi|295696005|ref|YP_003589243.1| 2-oxoglutarate dehydrogenase, E1 subunit [Bacillus tusciae DSM 2912] gi|295411607|gb|ADG06099.1| 2-oxoglutarate dehydrogenase, E1 subunit [Bacillus tusciae DSM 2912] Length = 941 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 4/112 (3%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A +G V E+ N++ L +++I NN T + + S Sbjct: 361 LLIHGDAAFPGEGVVAETLNLSGLAGYRTGGTLHIITNNLLGFTTERADDRSTRYASDLA 420 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 F IP + V+ + A A ++ AV Y R +I+++ YR GH+ SD Sbjct: 421 KGFEIPVVHVNADEPEACLAAVELAVEYRRRFHRDFLIDLVGYRRWGHNESD 472 >gi|224089136|ref|XP_002308644.1| predicted protein [Populus trichocarpa] gi|222854620|gb|EEE92167.1| predicted protein [Populus trichocarpa] Length = 657 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 16/109 (14%) Query: 136 ISKGKGGSMHMFSTKNGFYG--------------GHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH K+G G GHG +S G G+A A + + Sbjct: 94 ILTGRRSLMHTLRQKDGLSGFTSRSESEYDPFGAGHGC--NSISAGIGMAIARDIKGKRE 151 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 V G+G GQVYE+ A + N+I ++ ++++++ + S Sbjct: 152 RIVTVIGNGTTMAGQVYEAMGNAGYLDTNMIVILNDSRHSLHPKIEEGS 200 >gi|160897685|ref|YP_001563267.1| 1-deoxy-D-xylulose-5-phosphate synthase [Delftia acidovorans SPH-1] gi|160363269|gb|ABX34882.1| deoxyxylulose-5-phosphate synthase [Delftia acidovorans SPH-1] Length = 638 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 33/63 (52%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G+A A K + D+ + GDGA G +E+ N A + + N++ ++ +N ++ Sbjct: 137 ISAALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNAGVTDANLLVILNDNDMSIS 196 Query: 224 TSV 226 V Sbjct: 197 PPV 199 >gi|322829113|gb|EFZ32652.1| 2-oxoglutarate dehydrogenase E1 component, putative [Trypanosoma cruzi] Length = 1006 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 11/135 (8%) Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 AQ SLG K S + V GD A + QG V+E+ I+ + + + ++V+ Sbjct: 393 AAQASLG-------KDGSSTVLPVEIHGDAAFSGQGIVFETMCISEVDDYSTGGTVHVVV 445 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ T + + + G F P V+G + V + A + K ++ Sbjct: 446 NNQIGFTTDPKSSRSSAYCTDLGRVFQCPIFHVNGDSVEDVVRVFEFAADFRAKFKKSVV 505 Query: 277 IEMLTYRYRGHSMSD 291 I+++ YR GH+ +D Sbjct: 506 IDLVCYRRFGHNEND 520 >gi|218288692|ref|ZP_03492955.1| deoxyxylulose-5-phosphate synthase [Alicyclobacillus acidocaldarius LAA1] gi|218241050|gb|EED08226.1| deoxyxylulose-5-phosphate synthase [Alicyclobacillus acidocaldarius LAA1] Length = 631 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 46/243 (18%), Positives = 84/243 (34%), Gaps = 67/243 (27%) Query: 130 TGRQGGISKGKGGSMHMFSTKNGFYG---------------GHGIVGAQVSLGTGIAFAN 174 G QG + K G MF T G G G +S G+A A Sbjct: 73 VGHQGYVHKILTGRKDMFPTLRKLGGLAGFLKRSESEHDPFGAGHSSTSISAALGMAVAR 132 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV-------S 227 R D + GDGA G E+ N A ++I ++ +N+ ++ +V + Sbjct: 133 DLRNEDYHVIAVIGDGALTGGMAMEAMNHAGDLGTDLIVILNDNEMSISNNVGAVSKYLT 192 Query: 228 RASAQTNFSK----------------------------------------RGVSFNIPGM 247 R + N+++ G F G Sbjct: 193 RLRSDPNYARAKQDIDHLLRHLSNVGQKVTKVLDRAMEAARHMILPITPFEGFGFKYIG- 251 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSN 307 +DG D+R + +++ + KGPI++ +LT + +G+ ++ + + + + N Sbjct: 252 PIDGHDLRQLIPVLER----VKELKGPILLHVLTQKGKGYPQAENSEDKWHAWPSAAKPN 307 Query: 308 HDP 310 P Sbjct: 308 QAP 310 >gi|159488107|ref|XP_001702062.1| 1-deoxy-D-xylulose 5-phosphate synthase [Chlamydomonas reinhardtii] gi|158271436|gb|EDO97255.1| 1-deoxy-D-xylulose 5-phosphate synthase [Chlamydomonas reinhardtii] Length = 708 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 35/201 (17%) Query: 28 TSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIG 87 T +D V+ P + FN EQ L L + E ++ ++ + GG +G Sbjct: 52 TPLLDTVNYPV----HLKNFNNEQ------LKQLCK--ELRSDIVHTVSRTGGHLSSSLG 99 Query: 88 QEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGISKGK---- 140 + V M T D++I ++ +GH + LTGR+ G++ + Sbjct: 100 VVELTVAMHYVFNTPEDKIIWDVGHQAYGHKI------------LTGRRKGMATIRQTNG 147 Query: 141 --GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 G + S + F GH +LG + K +++ I V+ GDGA G Y Sbjct: 148 LSGFTKRDESEYDPFGAGHSSTSISAALGMAVGRDVKGKKNSVIAVI--GDGAITGGMAY 205 Query: 199 ESFNIAALWNLNVIYVIENNQ 219 E+ N A + N+I ++ +NQ Sbjct: 206 EAMNHAGFLDKNMIVILNDNQ 226 >gi|149174189|ref|ZP_01852817.1| Transketolase-like protein [Planctomyces maris DSM 8797] gi|148847169|gb|EDL61504.1| Transketolase-like protein [Planctomyces maris DSM 8797] Length = 280 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 13/152 (8%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G +SLG G A + + V GDG +GQV+E+ A + L N Sbjct: 117 GIEASTGSLGQGLSLGIGQALGARLNDNGSNVFVVIGDGEMGEGQVWEALAAAEKYKLGN 176 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC-- 268 + +I+ N Y + +F ++ +F ++G D AV ++ A Sbjct: 177 LTAIIDQNGYQQTGATHDVLDLGSFEEKISAFGWYTQTIEGNDQAAVVEALENAAKVTDR 236 Query: 269 ------RAHKG----PIIIEMLTYRYRGHSMS 290 + KG P++ E Y G +S Sbjct: 237 PKAIISKTKKGYGILPVLEETGDVNYHGKPLS 268 >gi|158312838|ref|YP_001505346.1| alpha-ketoglutarate decarboxylase [Frankia sp. EAN1pec] gi|158108243|gb|ABW10440.1| 2-oxoglutarate dehydrogenase, E1 subunit [Frankia sp. EAN1pec] Length = 1240 Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 5/115 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 V+ GD A A QG V E+ N++ L ++V+ NNQ TS + + + + Sbjct: 656 VLIHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHVVINNQVGFTTSPTSSRSSVYATDVA 715 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPA 293 P V+G D A A AY + ++I+++ YR RGH+ M +P+ Sbjct: 716 RMVQAPIFHVNGDDPEACVRVATLAFAYRQEFNKDVVIDLVCYRRRGHNEMDEPS 770 >gi|293374625|ref|ZP_06620941.1| 1-deoxy-D-xylulose-5-phosphate synthase [Turicibacter sanguinis PC909] gi|292646775|gb|EFF64769.1| 1-deoxy-D-xylulose-5-phosphate synthase [Turicibacter sanguinis PC909] Length = 585 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 30/183 (16%) Query: 129 LTGRQGG-ISKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G I + S+ +S+ + F GH +SL G+A A + + Sbjct: 83 LTGRKHGFIDPEQFASITGYSSPKESEHDFFTVGH--TSTSISLACGLAKARDVKGEKEN 140 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS------------VSRAS 230 + GDG+ + G+ YE N AA N+I ++ +N ++ + S + Sbjct: 141 IIAVIGDGSLSGGEAYEGLNNAAASGKNMIILVNDNDMSIAVNHGGLYKNLAELRQSNGT 200 Query: 231 AQTNFSKR-GVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + NF K G + +P +G DI A+ + + + P++I M T + +G+ Sbjct: 201 CENNFFKSLGFDYRFVP----NGHDIDALINVFSE----VKDTEKPVVIHMYTVKGKGYK 252 Query: 289 MSD 291 S+ Sbjct: 253 PSE 255 >gi|254373541|ref|ZP_04989028.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. novicida GA99-3549] gi|151571266|gb|EDN36920.1| 2-oxoglutarate dehydrogenase E1 component [Francisella novicida GA99-3549] Length = 937 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 10/121 (8%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTS----VSRAS 230 S + ++ GD A QG V E+F + A I+++ NNQ TS V+R+S Sbjct: 347 SKVLPILIHGDSAFCGQGVVMETFGFSLTEAYGTGGTIHLVVNNQVGFTTSSAFGVNRSS 406 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + V + P V+G D AV D A+ Y ++I+++ YR GH+ + Sbjct: 407 NYSTDVAKMV--DAPIFHVNGDDPEAVLKVTDIALEYRMKFNKDVVIDLVCYRRNGHNET 464 Query: 291 D 291 D Sbjct: 465 D 465 >gi|139438445|ref|ZP_01771961.1| Hypothetical protein COLAER_00951 [Collinsella aerofaciens ATCC 25986] gi|133775984|gb|EBA39804.1| Hypothetical protein COLAER_00951 [Collinsella aerofaciens ATCC 25986] Length = 593 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 14/158 (8%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH VSLG G+A A + GDG+ + G +E FN AA Sbjct: 105 SEHDLFAMGH--TSTSVSLGCGLAHARDLAGDSYNVITIIGDGSLSGGLAFEGFNNAAEL 162 Query: 208 NLNVIYVIENNQYAMGTS---VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD-- 262 + N+I ++ +N ++ + + R A+ S N+ + G+D R + A D Sbjct: 163 DSNLIIIVNDNDQSIAENHGGLYRNLAELRTSNGTCERNV--FRAMGLDYRYLDAGNDVL 220 Query: 263 ---KAVAYCRAHKGPIIIEMLTYRYRGH--SMSDPANY 295 + R PI++ + T + +G + SDP + Sbjct: 221 ALVDTLQELRNIDHPIVLHVSTAKGKGFEPAQSDPERW 258 >gi|71064683|ref|YP_263410.1| 2-oxoglutarate dehydrogenase E1 component [Psychrobacter arcticus 273-4] gi|71037668|gb|AAZ17976.1| 2-oxoglutarate dehydrogenase E1 component [Psychrobacter arcticus 273-4] Length = 961 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 21/167 (12%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----------ICVVCFGD 189 GG H+ F H + A V G+ A + RR+D+ + +V GD Sbjct: 318 GGEAHL---ALAFNPSHLEIVAPVLQGS--VRARQVRRNDQSLHENKAGNSVLPIVVHGD 372 Query: 190 GA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNI 244 A A QG V E+F ++ A ++++ NNQ TS T + + + Sbjct: 373 AAFAGQGVVQETFQMSQTRAYTTGGTLHIVINNQVGFTTSRQEDLRSTEYCTDVAKMVHA 432 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P + V+G D +V A+ Y III++ YR GH+ +D Sbjct: 433 PILHVNGDDPESVVFAAQLALDYRYEFDKDIIIDLFCYRRNGHNEAD 479 >gi|311278744|ref|YP_003940975.1| Transketolase domain-containing protein [Enterobacter cloacae SCF1] gi|308747939|gb|ADO47691.1| Transketolase domain-containing protein [Enterobacter cloacae SCF1] Length = 277 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 12/157 (7%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K R + C+V GDG N+GQ +E+F A LN + V Sbjct: 116 GSLGQGISIAGGMALSHKLAGRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 173 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ++ N+ + + + ++ +F V G DI ++ A + VA + P Sbjct: 174 VDWNKQQLDGELDDIIQPFDLDEKFRAFGFDVATVKGDDIASLLAEVKPVVA---PNARP 230 Query: 275 IIIEMLTYRYRG----HSMSDPANYRTREEINEMRSN 307 +I + + + +G + + + R EE E+ +N Sbjct: 231 KLIILDSVKGQGVAYLEQLGNSHHLRLTEETKEILNN 267 >gi|310829482|ref|YP_003961839.1| Transketolase domain protein [Eubacterium limosum KIST612] gi|308741216|gb|ADO38876.1| Transketolase domain protein [Eubacterium limosum KIST612] Length = 289 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 6/136 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + +G G+A K + D V GDG +G +E+ AA L N++ +I+ Sbjct: 124 GALGHGLPIGCGMALDAKLKDHDSRVFVLMGDGEQGEGSNWEAAMFAAHHKLDNLVAIID 183 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + + + +++ SF VDG D+ A M K A G P Sbjct: 184 RNGLQINGTTKEVLNSADLAEKYKSFGWGVEIVDGHDV----AAMLKVFEQTPAQAGKPT 239 Query: 276 IIEMLTYRYRGHSMSD 291 ++ T + +G S ++ Sbjct: 240 MVIANTVKSKGMSFAE 255 >gi|258512409|ref|YP_003185843.1| deoxyxylulose-5-phosphate synthase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479135|gb|ACV59454.1| deoxyxylulose-5-phosphate synthase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 631 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 46/242 (19%), Positives = 84/242 (34%), Gaps = 67/242 (27%) Query: 131 GRQGGISKGKGGSMHMFSTKNGFYG---------------GHGIVGAQVSLGTGIAFANK 175 G QG + K G MF T G G G +S G+A A Sbjct: 74 GHQGYVHKILTGRKDMFPTLRKLGGLAGFLKRSESEHDPFGAGHSSTSISAALGMAVARD 133 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV-------SR 228 R D + GDGA G E+ N A ++I ++ +N+ ++ +V +R Sbjct: 134 LRNEDYHVIAVIGDGALTGGMAMEAMNHAGDLGTDLIVILNDNEMSISNNVGAVSKYLTR 193 Query: 229 ASAQTNFSK----------------------------------------RGVSFNIPGMQ 248 + N+++ G F G Sbjct: 194 LRSDPNYARAKQDIDHLLRHLSNVGQKVTKVLDRAMEAARHMILPITPFEGFGFKYIG-P 252 Query: 249 VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNH 308 +DG D+R + +++ + KGPI++ +LT + +G+ ++ + + + + N Sbjct: 253 IDGHDLRQLIPVLER----VKELKGPILLHVLTQKGKGYPQAENSEDKWHAWPSAAKPNQ 308 Query: 309 DP 310 P Sbjct: 309 AP 310 >gi|257437515|ref|ZP_05613270.1| transketolase [Faecalibacterium prausnitzii A2-165] gi|257199822|gb|EEU98106.1| transketolase [Faecalibacterium prausnitzii A2-165] Length = 382 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 6/131 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G VS G+A K+ GDG +G+ +E+F A+ + L N+ +++ Sbjct: 217 GSLGQGVSAACGMALGAKHAGKPINVYTILGDGEVEEGECWEAFMFASHYGLSNLCVMLD 276 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA-HKGPI 275 N + + ++ +FN + ++G D A+++ A+A RA ++ P Sbjct: 277 RNHLQIDGTTETVMNSAPLEEKLKAFNFNVLTINGHDFDAIES----AIAAFRAENEKPT 332 Query: 276 IIEMLTYRYRG 286 I + T + +G Sbjct: 333 CIILDTLKGKG 343 >gi|217970188|ref|YP_002355422.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thauera sp. MZ1T] gi|217507515|gb|ACK54526.1| deoxyxylulose-5-phosphate synthase [Thauera sp. MZ1T] Length = 622 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAM 222 +S G+A A + R D+ + GDGA + G +E+ N A + NLN++ ++ +N+ ++ Sbjct: 123 ISAALGMAVAARARGEDRHAIAVIGDGAMSAGMAFEALNNAGDMENLNLLVILNDNEMSI 182 Query: 223 GTSV 226 V Sbjct: 183 SPPV 186 >gi|254375005|ref|ZP_04990485.1| 2-oxoglutarate dehydrogenase complex [Francisella novicida GA99-3548] gi|151572723|gb|EDN38377.1| 2-oxoglutarate dehydrogenase complex [Francisella novicida GA99-3548] Length = 937 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 10/121 (8%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTS----VSRAS 230 S + ++ GD A QG V E+F + A I+++ NNQ TS V+R+S Sbjct: 347 SKVLPILIHGDSAFCGQGVVMETFGFSLTEAYGTGGTIHLVVNNQVGFTTSSAFGVNRSS 406 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + V + P V+G D AV D A+ Y ++I+++ YR GH+ + Sbjct: 407 NYSTDVAKMV--DAPIFHVNGDDPEAVLKVTDIALEYRMKFNKDVVIDLVCYRRNGHNET 464 Query: 291 D 291 D Sbjct: 465 D 465 >gi|260549868|ref|ZP_05824084.1| 1-deoxyxylulose-5-phosphate synthase [Acinetobacter sp. RUH2624] gi|260407118|gb|EEX00595.1| 1-deoxyxylulose-5-phosphate synthase [Acinetobacter sp. RUH2624] Length = 637 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 35/219 (15%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEE-KAGQLYGM 75 L + +R T +D +D P Q+L L++ +E + LY Sbjct: 5 LYTEIPTQRPVTPLLDAIDHP-------------QQLRQLEHSQLVQVADELRQYILYAA 51 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGR 132 G GG +G + V + T D+++ ++ + H + LTGR Sbjct: 52 GQSGGHFGANLGVVELTVALHYCFNTPNDRLVWDVGHQAYPHKI------------LTGR 99 Query: 133 QGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCF- 187 + I+ + K G + + + G+ +S G G++ A +Y+ +D VVC Sbjct: 100 REQITTIRSKNGLAAFPAREESVFDTFGVGHSSTAISAGLGMSLARRYQ-NDPCEVVCIV 158 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GDGA G +E+ N A + ++I V+ +N ++ S Sbjct: 159 GDGAMTAGMAFEAMNDAVAHDADLIVVLNDNDMSISCST 197 >gi|299821959|ref|ZP_07053847.1| transketolase [Listeria grayi DSM 20601] gi|299817624|gb|EFI84860.1| transketolase [Listeria grayi DSM 20601] Length = 284 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 5/116 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S+ TGIA + D+ + GDG N+GQ +E+F A L N I I+ Sbjct: 121 GSLGQGTSIATGIAAGLARKGGDQYVYLIVGDGELNEGQCWEAFQYLAHAKLANCIVCID 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 N+ + + +F +V+G D+ A+ D+A+ + K Sbjct: 181 ENKGQNDGKSEEIVTHFDLQAKMEAFGFFTQKVNGRDVEAI----DEAITTAKKQK 232 >gi|208780223|ref|ZP_03247565.1| 2-oxoglutarate dehydrogenase, E1 component [Francisella novicida FTG] gi|208743872|gb|EDZ90174.1| 2-oxoglutarate dehydrogenase, E1 component [Francisella novicida FTG] Length = 937 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 10/121 (8%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTS----VSRAS 230 S + ++ GD A QG V E+F + A I+++ NNQ TS V+R+S Sbjct: 347 SKVLPILIHGDSAFCGQGVVMETFGFSLTEAYGTGGTIHLVVNNQVGFTTSSAFGVNRSS 406 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + V + P V+G D AV D A+ Y ++I+++ YR GH+ + Sbjct: 407 NYSTDVAKMV--DAPIFHVNGDDPEAVLKVTDIALEYRMKFNKDVVIDLVCYRRNGHNET 464 Query: 291 D 291 D Sbjct: 465 D 465 >gi|170028801|ref|XP_001842283.1| transketolase [Culex quinquefasciatus] gi|167877968|gb|EDS41351.1| transketolase [Culex quinquefasciatus] Length = 519 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 2/104 (1%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++ G+A+ K ++D V GDG + +G V+ES + A + L N+ Sbjct: 62 GTGSLGQGVAVACGMAYVGKNIDKADYRTYVLVGDGESAEGSVWESLHFAGHYKLDNLCV 121 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 + + N+ S + KR +F + VDG D R Sbjct: 122 IFDVNRLGQSEPTSLQHQMEVYRKRLDAFGFNAIVVDGHDDRPT 165 >gi|118498197|ref|YP_899247.1| alpha-ketoglutarate decarboxylase [Francisella tularensis subsp. novicida U112] gi|194324379|ref|ZP_03058152.1| 2-oxoglutarate dehydrogenase, E1 component [Francisella tularensis subsp. novicida FTE] gi|118424103|gb|ABK90493.1| 2-oxoglutarate dehydrogenase complex, E1 component, 2-oxoglutarate decarboxylase [Francisella novicida U112] gi|194321444|gb|EDX18929.1| 2-oxoglutarate dehydrogenase, E1 component [Francisella tularensis subsp. novicida FTE] Length = 937 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 10/121 (8%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTS----VSRAS 230 S + ++ GD A QG V E+F + A I+++ NNQ TS V+R+S Sbjct: 347 SKVLPILIHGDSAFCGQGVVMETFGFSLTEAYGTGGTIHLVVNNQVGFTTSSAFGVNRSS 406 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + V + P V+G D AV D A+ Y ++I+++ YR GH+ + Sbjct: 407 NYSTDVAKMV--DAPIFHVNGDDPEAVLKVTDIALEYRMKFNKDVVIDLVCYRRNGHNET 464 Query: 291 D 291 D Sbjct: 465 D 465 >gi|126701083|ref|YP_001089980.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile 630] gi|254977084|ref|ZP_05273556.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile QCD-66c26] gi|255094412|ref|ZP_05323890.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile CIP 107932] gi|255102669|ref|ZP_05331646.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile QCD-63q42] gi|255308490|ref|ZP_05352661.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile ATCC 43255] gi|255316164|ref|ZP_05357747.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile QCD-76w55] gi|255518825|ref|ZP_05386501.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile QCD-97b34] gi|255652004|ref|ZP_05398906.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile QCD-37x79] gi|255657414|ref|ZP_05402823.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile QCD-23m63] gi|260684979|ref|YP_003216264.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile CD196] gi|260688637|ref|YP_003219771.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile R20291] gi|296449010|ref|ZP_06890800.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile NAP08] gi|296879833|ref|ZP_06903806.1| transketolase, thiamine diphosphate-binding subunit [Clostridium difficile NAP07] gi|306521746|ref|ZP_07408093.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile QCD-32g58] gi|115252520|emb|CAJ70363.1| Transketolase, thiamine diphosphate binding subunit [Clostridium difficile] gi|260211142|emb|CBA66576.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile CD196] gi|260214654|emb|CBE07272.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile R20291] gi|296262103|gb|EFH08908.1| transketolase, thiamine disphosphate-binding subunit [Clostridium difficile NAP08] gi|296429122|gb|EFH14996.1| transketolase, thiamine diphosphate-binding subunit [Clostridium difficile NAP07] Length = 275 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S+ G+A A+K + GDG +G V+E+ AA + L N+I ++ Sbjct: 116 GSLGQGFSVACGMAMASKLDNAPWNVYTLLGDGEVQEGIVWEAAMSAAHYKLDNLIAFLD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN + + + + + +F +++DG D + A +D A + K P + Sbjct: 176 NNGLQIDGDIESVMSLGSIVDKFKAFGWNVIEIDGHDFDQIFAALDIAKSTV---KKPTM 232 Query: 277 IEMLTYRYRGHSM 289 I T + +G S Sbjct: 233 IVAKTIKGKGISF 245 >gi|227536303|ref|ZP_03966352.1| transketolase, N-terminal subunit [Sphingobacterium spiritivorum ATCC 33300] gi|227243910|gb|EEI93925.1| transketolase, N-terminal subunit [Sphingobacterium spiritivorum ATCC 33300] Length = 282 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 5/127 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G A A K + + + V GDG +GQV+E+ A + N+I ++ Sbjct: 119 GSLGQGLSVAIGAAQAKKLNKDNNLVYVLMGDGELQEGQVWEAAMYAPHNKIDNLIATVD 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 N+ + S + + + + +F +++ G D+ AV A +++A + R KG P Sbjct: 179 YNKAQIDGSTDQVLSLGDLRAKWEAFGWDVLEIAKGNDMTAVVAGLEEAKS--RTGKGKP 236 Query: 275 IIIEMLT 281 ++I M T Sbjct: 237 VVILMHT 243 >gi|254369884|ref|ZP_04985893.1| 2-oxoglutarate dehydrogenase complex [Francisella tularensis subsp. holarctica FSC022] gi|157122854|gb|EDO66971.1| 2-oxoglutarate dehydrogenase complex [Francisella tularensis subsp. holarctica FSC022] Length = 937 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 10/121 (8%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTS----VSRAS 230 S + ++ GD A QG V E+F + A I+++ NNQ TS V+R+S Sbjct: 347 SKVLPILIHGDSAFCGQGVVMETFGFSLTEAYGTGGTIHLVVNNQVGFTTSSAFGVNRSS 406 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + V + P V+G D AV D A+ Y ++I+++ YR GH+ + Sbjct: 407 NYSTDVAKMV--DAPIFHVNGDDPEAVLKVTDIALEYRMKFNKDVVIDLVCYRRNGHNET 464 Query: 291 D 291 D Sbjct: 465 D 465 >gi|125973346|ref|YP_001037256.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium thermocellum ATCC 27405] gi|256005452|ref|ZP_05430415.1| deoxyxylulose-5-phosphate synthase [Clostridium thermocellum DSM 2360] gi|281417546|ref|ZP_06248566.1| deoxyxylulose-5-phosphate synthase [Clostridium thermocellum JW20] gi|125713571|gb|ABN52063.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium thermocellum ATCC 27405] gi|255990592|gb|EEU00711.1| deoxyxylulose-5-phosphate synthase [Clostridium thermocellum DSM 2360] gi|281408948|gb|EFB39206.1| deoxyxylulose-5-phosphate synthase [Clostridium thermocellum JW20] gi|316940422|gb|ADU74456.1| deoxyxylulose-5-phosphate synthase [Clostridium thermocellum DSM 1313] Length = 627 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 15/163 (9%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S GIA A R+ V GDGA G +E+ N A Sbjct: 103 SEYDAFNTGHS--STSISAALGIAKARDLRKEKYSVVAVIGDGALTGGMAFEALNDAGRS 160 Query: 208 NLNVIYVIENNQYAMGTSV-------SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+I V+ +N+ ++ +V S+ + + K +I ++ + AVKA Sbjct: 161 PNNLIVVLNDNEMSISKNVGGLSVYLSKIRTEPFYFKVKEDIDIILNKIPAIGKSAVKA- 219 Query: 261 MDKAVAYCRAHKGP-IIIEMLTYRY----RGHSMSDPANYRTR 298 + + + P I+ E L ++Y GH++++ N TR Sbjct: 220 LGRVKGTIKYMIMPGIVFEELGFKYLGPIDGHNIAELENVLTR 262 >gi|330816702|ref|YP_004360407.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia gladioli BSR3] gi|327369095|gb|AEA60451.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia gladioli BSR3] Length = 956 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 341 GSAKARMDRRGDADGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 400 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV + A+ Y ++I+ Sbjct: 401 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLAVQIAIDYRMQFHKDVVID 460 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 461 IVCFRKLGHNEQDTPA 476 >gi|325841880|ref|ZP_08167511.1| 1-deoxy-D-xylulose-5-phosphate synthase [Turicibacter sp. HGF1] gi|325489835|gb|EGC92188.1| 1-deoxy-D-xylulose-5-phosphate synthase [Turicibacter sp. HGF1] Length = 585 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 30/183 (16%) Query: 129 LTGRQGG-ISKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G I + S+ +S+ + F GH +SL G+A A + + Sbjct: 83 LTGRKHGFIDPEQFASITGYSSPKESEHDFFTVGH--TSTSISLACGLAKARDVKGEKEN 140 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS------------VSRAS 230 + GDG+ + G+ YE N AA N+I ++ +N ++ + S + Sbjct: 141 IIAVIGDGSLSGGEAYEGLNNAAASGKNMIILVNDNDMSIAVNHGGLYKNLAELRQSNGT 200 Query: 231 AQTNFSKR-GVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + NF K G + +P +G DI A+ + + + P++I M T + +G+ Sbjct: 201 CENNFFKSLGFDYRFVP----NGHDIDALINVFSE----VKDTEKPVVIHMYTVKGKGYK 252 Query: 289 MSD 291 S+ Sbjct: 253 PSE 255 >gi|289670109|ref|ZP_06491184.1| 2-oxoglutarate dehydrogenase E1 component [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 817 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ V ++++ NNQ TS +R A++ Sbjct: 223 RKTVLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVINNQIGFTTS-TRDDARS 281 Query: 234 NFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 282 TLYCTDVAKMIGAPVFHVNGDDPDAVMFVSKLAYEFRQQFKKDVVIDLVCYRRWGHNEAD 341 Query: 292 ------PANYRT 297 P Y+T Sbjct: 342 EPAATQPVMYQT 353 >gi|224284202|gb|ACN39837.1| unknown [Picea sitchensis] Length = 740 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 13/109 (11%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH +G G G G +S G G+A R Sbjct: 171 ILTGRRSKMHTIRQTSGLAGFPKRDESKYDAFGAGHSSTSISAGLGMAVGRDLLRKSNHV 230 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVI-ENNQYAMGTSVSRASA 231 V GDGA GQ YE+ N + N+I ++ +N Q ++ T+ +A Sbjct: 231 VAVIGDGAMTAGQAYEAMNNSGYLESNLIIILNDNKQVSLPTATLDGAA 279 >gi|187931032|ref|YP_001891016.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. mediasiatica FSC147] gi|187711941|gb|ACD30238.1| 2-oxoglutarate dehydrogenase, E1 component [Francisella tularensis subsp. mediasiatica FSC147] Length = 937 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 10/121 (8%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTS----VSRAS 230 S + ++ GD A QG V E+F + A I+++ NNQ TS V+R+S Sbjct: 347 SKVLPILIHGDSAFCGQGVVMETFGFSLTEAYGTGGTIHLVVNNQVGFTTSSAFGVNRSS 406 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + V + P V+G D AV D A+ Y ++I+++ YR GH+ + Sbjct: 407 NYSTDVAKMV--DAPIFHVNGDDPEAVLKVTDIALEYRMKFNKDVVIDLVCYRRNGHNET 464 Query: 291 D 291 D Sbjct: 465 D 465 >gi|146341660|ref|YP_001206708.1| putative transketolase subunit alpha [Bradyrhizobium sp. ORS278] gi|146194466|emb|CAL78491.1| putative transketolase, alpha subunit [Bradyrhizobium sp. ORS278] Length = 282 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 3/117 (2%) Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMG 223 + G+ K ++S F DG ++G V+E+ + A+ + L N+I +++ NNQ A G Sbjct: 131 IAVGMGLGLKRKKSSSRVYTLFSDGELDEGSVWEAISSASHYKLDNLIGIVDVNNQQADG 190 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 S ++ R +F ++DG D+ AV A D A ++ I+ + L Sbjct: 191 PS-TQVMGFEPLVDRLEAFGWFVQRIDGNDLDAVLAAFDAAKSHPEPKPRMIVADTL 246 >gi|332217640|ref|XP_003257967.1| PREDICTED: transketolase-like protein 2-like [Nomascus leucogenys] Length = 625 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+F A+ +NL N++ V Sbjct: 123 GCLGQGLGAACGMAYTGKYLDKASYRVFCLMGDGESSEGSVWEAFAFASHYNLDNLVAVF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + +F VDG D+ A+ +A + P Sbjct: 183 DVNRLGQSGPAPLEHGADIYQNCCEAFGWNTYLVDGHDVEALCQAFWQA---SQVKNKPT 239 Query: 276 IIEMLTYRYRG-HSMSDPANY 295 I T++ RG ++ D N+ Sbjct: 240 AIVAKTFKGRGIPNIEDAENW 260 >gi|296533687|ref|ZP_06896241.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseomonas cervicalis ATCC 49957] gi|296265986|gb|EFH12057.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseomonas cervicalis ATCC 49957] Length = 650 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 15/116 (12%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRS--- 179 LTGR+ I + +GG + F+ + + F H +S G G+A A +R+ Sbjct: 89 LTGRRDRIRTLRQGGGLSGFTRRSESEYDPFGAAHS--STSISAGLGMAVARDLKRAMPG 146 Query: 180 ----DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 D+ + GDGA + G YE+ N A +I V+ +N ++ V SA Sbjct: 147 EPRDDRNVIAVIGDGAMSAGMAYEAMNNAGAMRSRLIVVLNDNDMSIAPPVGAMSA 202 >gi|154483651|ref|ZP_02026099.1| hypothetical protein EUBVEN_01355 [Eubacterium ventriosum ATCC 27560] gi|149735561|gb|EDM51447.1| hypothetical protein EUBVEN_01355 [Eubacterium ventriosum ATCC 27560] Length = 628 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 12/122 (9%) Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 + F GH +S G+A A + +D+ V GDGA + G E+ N AA N Sbjct: 110 DSFDTGHS--STSISAALGMATAAELNETDEKIVAVIGDGALSGGMALEAINNAADLKRN 167 Query: 211 VIYVIENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMD-IRAVKAT 260 ++ +I +N+ ++ +V RAS Q N K V ++ + G +++VK T Sbjct: 168 MLIIINDNKMSISKNVGGMSNYLNKLRASEQYNDFKSDVETSLSRIPKFGSSLVKSVKRT 227 Query: 261 MD 262 D Sbjct: 228 KD 229 >gi|323702780|ref|ZP_08114440.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum nigrificans DSM 574] gi|323532297|gb|EGB22176.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum nigrificans DSM 574] Length = 639 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 46/214 (21%), Positives = 81/214 (37%), Gaps = 57/214 (26%) Query: 129 LTGRQGGISKGKG-GSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGRQ S + G + F S + F GH +S G+ A + Sbjct: 82 LTGRQAQFSTLRQYGGLSGFPKRDESIHDAFDTGHS--STSISAALGMVLARDLKGEKYS 139 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS---------RASAQT 233 V GDG+ G +E+ N A N+I ++ +N+ ++ +V R + Sbjct: 140 VVAVIGDGSMTGGMAFEALNHAGHLKKNLIVILNDNEMSIAPNVGALSSYLSSLRTDPKY 199 Query: 234 NFSKRGVS-------------------------FNIPGM-----------QVDGMDIRAV 257 + SK ++ +PGM VDG DI+AV Sbjct: 200 SRSKDEIAELLQKIPHGPKLLKVVDRLKDSLKYLVVPGMLFEELGFTYLGPVDGHDIKAV 259 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + +A + GP+++ +LT + +G+ ++ Sbjct: 260 TTMLKQA----KNLGGPVLVHVLTKKGKGYEPAE 289 >gi|319408216|emb|CBI81869.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella schoenbuchensis R1] Length = 640 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 9/110 (8%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F GH +S G G+A A+ + ++ Sbjct: 86 LTGRRDKIRTLRQDGGLSGFTKRSESVYDSFGAGHS--STSISAGLGMAVASMLKAEERR 143 Query: 183 CVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 ++C GDGA + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 NIICVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 193 >gi|291529301|emb|CBK94887.1| 1-deoxy-D-xylulose-5-phosphate synthase [Eubacterium rectale M104/1] Length = 618 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 86/225 (38%), Gaps = 60/225 (26%) Query: 129 LTGRQGGISKGKG-GSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G S + G M F S + F GH +S G G+A A + D Sbjct: 80 LTGRKDGFSSLRQYGGMSGFPKADESDCDCFNTGHS--STSISAGLGLATARQVTGDDYH 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS----------RASAQ 232 V GDGA G YE+ N A+ N I V+ +N ++ +V A A Sbjct: 138 VVSVIGDGALTGGMAYEALNNASSVKGNFIIVLNDNNMSISENVGGISQYLSGFRTADAY 197 Query: 233 TNFSKRGV-SFN------------------------IPGM-----------QVDGMDIRA 256 +F + S N IPGM VDG DI+ Sbjct: 198 RDFKNNVMNSINHIPIYGERMVKHIRNTKSSIKQLFIPGMFFEEMGIIYLGPVDGSDIKE 257 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD--PANYRTRE 299 + D+A + GP+++ +LT + G+ ++ P+ + E Sbjct: 258 MCRVFDEA----KRVDGPVLVHVLTKKGSGYGPAERYPSRFHGAE 298 >gi|307730019|ref|YP_003907243.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia sp. CCGE1003] gi|307584554|gb|ADN57952.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia sp. CCGE1003] Length = 953 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 16/145 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D+ + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 338 GSAKARMDRRGDESGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P + V+G D AV A+ + ++++ Sbjct: 398 IGFTTSDPRDSRSTLYCSDVVKMIEAPVLHVNGDDPEAVVLATQLAIDFRMQFHKDVVVD 457 Query: 279 MLTYRYRGHSMSD------PANYRT 297 ++ +R GH+ D P Y+T Sbjct: 458 IVCFRKLGHNEQDTPAVTQPLMYKT 482 >gi|225388186|ref|ZP_03757910.1| hypothetical protein CLOSTASPAR_01921 [Clostridium asparagiforme DSM 15981] gi|225045744|gb|EEG55990.1| hypothetical protein CLOSTASPAR_01921 [Clostridium asparagiforme DSM 15981] Length = 621 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 2/96 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G GIA D V GDGA G YE+ N AA Sbjct: 105 SPYDCFDTGHS--STSISAGLGIAQGRDILGQDYEVVSVIGDGALTGGMAYEALNNAARM 162 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 N I V+ +N+ ++ +V S N + G +N Sbjct: 163 KKNFIIVLNDNKMSISENVGGMSRYLNGLRTGSGYN 198 >gi|157961612|ref|YP_001501646.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella pealeana ATCC 700345] gi|157846612|gb|ABV87111.1| 2-oxoglutarate dehydrogenase, E1 subunit [Shewanella pealeana ATCC 700345] Length = 940 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 5/113 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKR 238 + GD A QG V E+FN++ V I ++ NNQ T+++ T + + Sbjct: 360 ITIHGDSAITGQGIVQETFNMSQTRGFKVGGSIRIVVNNQVGFTTNLTEDVRSTEYCTDI 419 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV AV Y K ++I+++ YR GH+ +D Sbjct: 420 AKMVQAPIFHVNADDPEAVAFVSQLAVDYRNEFKRDVVIDLVCYRRHGHNEAD 472 >gi|134301290|ref|YP_001121258.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. tularensis WY96-3418] gi|134049067|gb|ABO46138.1| 2-oxoglutarate dehydrogenase, E1 component [Francisella tularensis subsp. tularensis WY96-3418] Length = 941 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 10/121 (8%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTS----VSRAS 230 S + ++ GD A QG V E+F + A I+++ NNQ TS V+R+S Sbjct: 351 SKVLPILIHGDSAFCGQGVVMETFGFSLTEAYGTGGTIHLVVNNQVGFTTSSAFGVNRSS 410 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + V + P V+G D AV D A+ Y ++I+++ YR GH+ + Sbjct: 411 NYSTDVAKMV--DAPIFHVNGDDPEAVLKVTDIALEYRMKFNKDVVIDLVCYRRNGHNET 468 Query: 291 D 291 D Sbjct: 469 D 469 >gi|145547689|ref|XP_001459526.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124427351|emb|CAK92129.1| unnamed protein product [Paramecium tetraurelia] Length = 644 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 11/146 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKI---CVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G +G +S+ G+A+++K+ DKI V GDG +G V+E+ ++A+ + L N+ Sbjct: 146 GSLGQGLSVAGGMAYSSKFL--DKINNRYWVLMGDGEIAEGSVWEAAHLASHYKLDNLTA 203 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 +++ N+ S T + KR +F + VDG ++ + A CR K Sbjct: 204 IVDVNRLGQSEETSIGHDITVYKKRWEAFGWKTIVVDGHNLN----LLTDAFEQCRNVKN 259 Query: 274 -PIIIEMLTYRYRGHSMSDPANYRTR 298 P +I T++ + M + ++ + Sbjct: 260 QPQVIIAKTFKGKYLEMENKEDWHGK 285 >gi|110005701|emb|CAL00011.1| probable transketolase transmembrane protein [Spiroplasma citri] Length = 654 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 7/109 (6%) Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIENNQYAMGTSVSRASAQT 233 KY D V GDG +G E+ ++A W LN +I + ++N + V+ A ++ Sbjct: 138 KYPLYDHYTYVLCGDGDLQEGVTQEAISLAGHWKLNKLIVLFDSNDVQLDNMVNVAQSE- 196 Query: 234 NFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 N + R + N + V DG DI A+ D+A+ + P +IE+ T Sbjct: 197 NIADRFKAANWNYLFVKDGNDIEAI----DQAIIKAKKSNKPTLIEVKT 241 >gi|90415577|ref|ZP_01223511.1| deoxyxylulose-5-phosphate synthase [marine gamma proteobacterium HTCC2207] gi|90332900|gb|EAS48070.1| deoxyxylulose-5-phosphate synthase [marine gamma proteobacterium HTCC2207] Length = 661 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 65/289 (22%), Positives = 115/289 (39%), Gaps = 61/289 (21%) Query: 66 EEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDA 122 E +A LY +G GG +G + + + T GD+++ ++ + H + G Sbjct: 41 ELRAFILYCVGKTGGHFGAGLGVTELTIALHHVFNTPGDRLVWDVGHQTYPHKILTG--- 97 Query: 123 SKIMAELTGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 + L+ RQ G+S S F T F GH +S G+A A+ ++ Sbjct: 98 -RREQMLSMRQKDGLSGFPKRSESDFDT---FGVGHS--STSISAALGMAMASSQLGEER 151 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV------------SRA 229 V GDGA G +E+ N A+ + N++ V+ +NQ ++ +V SR Sbjct: 152 RAVAIMGDGAMTAGMAFEALNHASHVDKNLLVVLNDNQMSISRNVGGLSTYFSKLWSSRI 211 Query: 230 SAQ---------------TNFSKR-----------GVSFNIPGM----QVDGMDIRAVKA 259 Q TNF +R F G +DG D+ + Sbjct: 212 YTQFREGGKKVLSGMPHATNFVRRTEEYMKSMVSPATIFEELGFYYVGPIDGHDLPLLVE 271 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRS 306 T+ K + KG +++ ++T++ +G + + DP Y +I +S Sbjct: 272 TLRK----LKEIKGAVLLHIITHKGKGFAPAENDPVGYHALNKIEPKQS 316 >gi|225849346|ref|YP_002729510.1| transketolase (TK) [Sulfurihydrogenibium azorense Az-Fu1] gi|225644707|gb|ACN99757.1| transketolase (TK) [Sulfurihydrogenibium azorense Az-Fu1] Length = 286 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 15/144 (10%) Query: 157 HGIVGAQVSLGT---------GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 HG+ GA+ S G+ G A + K D V GDG +G V+E+ A Sbjct: 118 HGVPGAEASTGSLGQGLSVAIGQALSGKLANKDYRVYVMLGDGEIQEGMVWEAAMFAGHH 177 Query: 208 NL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 L N+ +++NN + V + + + +F +++DG D + + +++A Sbjct: 178 KLDNLCAIVDNNNLQIDGDVRQIVNVHPLADKYKAFGWHAIEIDGHDYQQIIDALEEA-- 235 Query: 267 YCRAHKG-PIIIEMLTYRYRGHSM 289 R KG P +I T + +G S Sbjct: 236 --RNTKGKPTVIVAHTVKGKGVSF 257 >gi|153799536|gb|ABS50519.1| 1-deoxy-D-xylulose 5-phosphate synthase type II [Picea abies] Length = 740 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 13/109 (11%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH +G G G G +S G G+A R Sbjct: 171 ILTGRRSKMHTIRQTSGLAGFPKRDESKYDAFGAGHSSTSISAGLGMAVGRDLLRKSNHV 230 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVI-ENNQYAMGTSVSRASA 231 V GDGA GQ YE+ N + N+I ++ +N Q ++ T+ +A Sbjct: 231 VAVIGDGAMTAGQAYEAMNNSGYLESNLIIILNDNKQVSLPTATLDGAA 279 >gi|146328164|emb|CAM58081.1| hypothetical protein [uncultured marine microorganism] Length = 953 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 6/122 (4%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + + V+ GD A + QG V E+F ++ I+++ NNQ TS + + T Sbjct: 353 RREVVPVLVHGDAAFSGQGVVTETFQMSQTNGFRTGGTIHIVINNQIGFTTSRPQDARST 412 Query: 234 NF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 + S P V+G + + A+ Y + K ++I+++ YR GH+ +D Sbjct: 413 PYCSDVAKMIEAPVFHVNGDEPESAIFVTRLALQYRQKFKKDVVIDLVCYRRHGHNEADE 472 Query: 292 PA 293 PA Sbjct: 473 PA 474 >gi|292670949|ref|ZP_06604375.1| transketolase [Selenomonas noxia ATCC 43541] gi|292647570|gb|EFF65542.1| transketolase [Selenomonas noxia ATCC 43541] Length = 292 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 20/166 (12%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A KY + + GDG +GQV+E+ AA + L N+ ++ Sbjct: 127 GSLGQGISTAVGMAKGAKYLKKNINVYTLLGDGELAEGQVWEATMFAAHYGLDNLCITVD 186 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--- 273 N + + + K+ +F +++DG D A +++A A+K Sbjct: 187 VNGLQIDGATADVMNTEPIDKKFEAFGCAVLKIDGHDYEA----LERAFTAFHANKSSGK 242 Query: 274 PIIIEMLTYR------------YRGHSMSDPANYRTREEINEMRSN 307 P +I M T + + G + +D R EE+ +R + Sbjct: 243 PTVILMKTIKGKDISFMENNAGWHGKAPNDDELARGLEELAAIRRD 288 >gi|257125628|ref|YP_003163742.1| 1-deoxy-D-xylulose-5-phosphate synthase [Leptotrichia buccalis C-1013-b] gi|257049567|gb|ACV38751.1| 1-deoxy-D-xylulose-5-phosphate synthase [Leptotrichia buccalis C-1013-b] Length = 582 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 28/177 (15%) Query: 129 LTGRQGGI------SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 +TGR+ G S+ G + S + F GH VSL TG+A A R + Sbjct: 80 ITGRKFGFLDLDRYSEVSGYTNQDESEHDFFKIGH--TSTSVSLATGLAKARDLRGKKEN 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS------------VSRAS 230 + GDG+ + G+ +E N+A+ N+I V +N ++ + S Sbjct: 138 IIAIIGDGSLSGGEAFEGLNMASEIGTNMIIVANDNDMSIAENHGGLYKNLRELRESNGQ 197 Query: 231 AQTNFSKRGVSFNIPGMQVD-GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 AQ N+ K S + + VD G D+ A+ +K + PI++ + T + +G Sbjct: 198 AQNNYFK---SLGLDYVYVDKGNDLDALIEVFEK----VKDINHPIVVHVHTQKGKG 247 >gi|89901646|ref|YP_524117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodoferax ferrireducens T118] gi|118595611|sp|Q21UG7|DXS_RHOFD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|89346383|gb|ABD70586.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodoferax ferrireducens T118] Length = 632 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 33/63 (52%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G+A A K R ++ + GDGA G +E+ N A + + N++ ++ +N ++ Sbjct: 125 ISAALGMALAAKIRGEERYAIAVIGDGALTAGMAFEALNNAGVADCNLLVILNDNDMSIS 184 Query: 224 TSV 226 V Sbjct: 185 PPV 187 >gi|194208350|ref|XP_001498412.2| PREDICTED: transketolase-like 2, partial [Equus caballus] Length = 625 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+ + A+ +NL N++ V Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVFCLMGDGESSEGSVWEALDFASHYNLDNLVAVF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + R +F VDG D+ + +A + P Sbjct: 183 DVNRLGQSGVTPLEHCTDVYQNRCEAFGWNTYLVDGHDVEGLCHAFWQAT---QVKNKPT 239 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 240 AIVAKTFKGRG 250 >gi|156503256|ref|YP_001429321.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. holarctica FTNF002-00] gi|156253859|gb|ABU62365.1| 2-oxoglutarate dehydrogenase, E1 component [Francisella tularensis subsp. holarctica FTNF002-00] Length = 941 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 10/121 (8%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTS----VSRAS 230 S + ++ GD A QG V E+F + A I+++ NNQ TS V+R+S Sbjct: 351 SKVLPILIHGDSAFCGQGVVMETFGFSLTEAYGTGGTIHLVVNNQVGFTTSSAFGVNRSS 410 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + V + P V+G D AV D A+ Y ++I+++ YR GH+ + Sbjct: 411 NYSTDVAKMV--DAPIFHVNGDDPEAVLKVTDIALEYRMKFNKDVVIDLVCYRRNGHNET 468 Query: 291 D 291 D Sbjct: 469 D 469 >gi|145354857|ref|XP_001421691.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581929|gb|ABO99984.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 730 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 5/121 (4%) Query: 178 RSDKICVVCFGD----GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD G G+V + ++ ++V+ NNQ T RA + Sbjct: 97 RAHVLPLLLHGDASFCGLGQNGEVMQLQDLPDYTTGGTVHVVVNNQIGFTTVPRRARSSP 156 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 + S ++ P + V+G D AV + M A Y + +++ + YR GH+ + DP Sbjct: 157 HPSDVAKAYGAPIIHVNGDDPDAVVSAMRLAADYRAEFQSDVVVNYVCYRRFGHNELDDP 216 Query: 293 A 293 + Sbjct: 217 S 217 >gi|320528502|ref|ZP_08029659.1| transketolase, thiamine diphosphate binding domain protein [Solobacterium moorei F0204] gi|320131088|gb|EFW23661.1| transketolase, thiamine diphosphate binding domain protein [Solobacterium moorei F0204] Length = 271 Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW-NLNVIYVIE 216 G +G ++ G+A ANK +D GDG +G+++E+ AA + N N+ +I+ Sbjct: 115 GSLGQGFAVADGMALANKLAGNDHRIYCLIGDGETEEGEIWEAAMAAAHYNNDNLCAIID 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + S ++ +F + VDG D+ ++A A A + KG P Sbjct: 175 VNGLQIDGKTSDVIGPEPLDQKFAAFGFHVICVDGHDMEELRA----AFAEAKTVKGKPT 230 Query: 276 IIEMLTYRYRGHSM 289 I T + +G S Sbjct: 231 AIIARTVKGKGVSF 244 >gi|169832217|ref|YP_001718199.1| transketolase domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169639061|gb|ACA60567.1| Transketolase domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 271 Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A + D GDG +GQ++E+ AA + L ++ +++ Sbjct: 117 GSLGQGLSAANGMALAARLDGRDYRVYALLGDGECQEGQIWEAAMAAAHYALESLTAIVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + VS + + +F +++DG D R + ++KA R+ KG P Sbjct: 177 FNGLQIDGPVSEVMSPEPIPDKWRAFGWHVLEIDGHDFRQILVALEKA----RSTKGRPT 232 Query: 276 IIEMLTYRYRGHSM 289 I T + +G S Sbjct: 233 AIVARTVKGKGVSF 246 >gi|115315402|ref|YP_764125.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. holarctica OSU18] gi|290953669|ref|ZP_06558290.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. holarctica URFT1] gi|295312986|ref|ZP_06803695.1| 2-oxoglutarate dehydrogenase E1 component [Francisella tularensis subsp. holarctica URFT1] gi|115130301|gb|ABI83488.1| oxoglutarate dehydrogenase (succinyl-transferring) [Francisella tularensis subsp. holarctica OSU18] Length = 937 Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 10/121 (8%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTS----VSRAS 230 S + ++ GD A QG V E+F + A I+++ NNQ TS V+R+S Sbjct: 347 SKVLPILIHGDSAFCGQGVVMETFGFSLTEAYGTGGTIHLVVNNQVGFTTSSAFGVNRSS 406 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + + V + P V+G D AV D A+ Y ++I+++ YR GH+ + Sbjct: 407 NYSTDVAKMV--DAPIFHVNGDDPEAVLKVTDIALEYRMKFNKDVVIDLVCYRRNGHNET 464 Query: 291 D 291 D Sbjct: 465 D 465 >gi|157362929|ref|YP_001469696.1| transketolase [Thermotoga lettingae TMO] gi|157313533|gb|ABV32632.1| Transketolase domain protein [Thermotoga lettingae TMO] Length = 629 Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust. Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 26/170 (15%) Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 ++ + DQ+I +R H I +G +++G G ++T N Sbjct: 84 RLGFVDIDQVIAGFRHHSSIF----------------EGHVTRGIPGVE--WTTGN---- 121 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 +G +S G G A A K + D V D +GQV E+ +A + L+ + V+ Sbjct: 122 ----LGQGLSAGVGFALAAKMKEQDYHIFVAMSDAEQAKGQVAEARRVAKKYGLSNLTVV 177 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + A + +R N K + ++VDG DI + + +AV Sbjct: 178 IDYNDAQISGRARDVMPVNIRKNYEADGWRVLEVDGHDIEQLLHALSQAV 227 >gi|218132229|ref|ZP_03461033.1| hypothetical protein BACPEC_00086 [Bacteroides pectinophilus ATCC 43243] gi|217992888|gb|EEC58888.1| hypothetical protein BACPEC_00086 [Bacteroides pectinophilus ATCC 43243] Length = 629 Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTKN-----GFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ +K K G M F +N F GH +S G G A A D Sbjct: 84 LTGRKNQFNKLRKYGGMSGFPKRNESNYDAFDTGHS--STSISAGLGYASARNITGEDYH 141 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + GDGA G YE+ N A+ N I V+ +N ++ +V Sbjct: 142 VISVIGDGALTGGMAYEALNNASSLKKNFIIVLNDNSMSISENV 185 >gi|154815951|emb|CAN89181.1| 1-Deoxy-D-xylulose 5-phosphate synthase 2 precursor [Medicago truncatula] Length = 710 Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 72/192 (37%), Gaps = 35/192 (18%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH +G G G G +S G G+A A Sbjct: 145 ILTGRRSRMHTIRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAIARDLLGKKNSV 204 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY----------------AMGTSVS 227 + GDGA GQ YE+ N A + N+I ++ +N+ A+ +++S Sbjct: 205 ISVIGDGAMTAGQAYEALNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSTLS 264 Query: 228 RASAQTNFSK-RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY-- 284 + A F K R + NI Q+ G V + +DK + G + E L Y Sbjct: 265 KIQASRKFRKLREATKNI-TKQIGG-QTHLVASKVDKYARDFISGSGSSLFEELGMYYIG 322 Query: 285 --RGHSMSDPAN 294 GH++ D N Sbjct: 323 PMDGHNIEDLVN 334 >gi|307130097|ref|YP_003882113.1| 2-oxoglutarate decarboxylase, thiamin-requiring [Dickeya dadantii 3937] gi|306527626|gb|ADM97556.1| 2-oxoglutarate decarboxylase, thiamin-requiring [Dickeya dadantii 3937] Length = 935 Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 5/156 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+ N++ V I ++ NNQ TS R + T + + Sbjct: 352 LPITIHGDAAIAGQGVVQETLNMSKARGYEVGGTIRIVINNQIGFTTSNPRDARSTEYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 G P V+ D AV A+ + + + I+++ YR GH+ +D + Sbjct: 412 DIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFQRDVFIDLVCYRRHGHNEADEPSAT 471 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +++ + P + RL + A+ D E+ Sbjct: 472 QPVMYQKIKKHPTPRKIYADRLEQQQMATLEDATEL 507 >gi|256082059|ref|XP_002577280.1| transketolase [Schistosoma mansoni] gi|238662586|emb|CAZ33517.1| transketolase [Schistosoma mansoni] Length = 585 Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust. Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 10/126 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G VS+ G+A+ KY V C GDG + +G ++E+ ++ + L N++ + Sbjct: 76 GSLGQGVSIAAGMAYVGKYIDKASYRVYCVVGDGESTEGSIWEALAFSSFYKLDNLVIIF 135 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV-------KATMDKAVAY- 267 + N+ + R +F + VDG +I + + +K VA Sbjct: 136 DVNRLGQSQPTQLQHHLEAYRLRTEAFGCHSIVVDGHNIEELLKAFSCARTVKNKPVALI 195 Query: 268 CRAHKG 273 C+ +KG Sbjct: 196 CKTYKG 201 >gi|134094978|ref|YP_001100053.1| 2-oxoglutarate dehydrogenase E1 component [Herminiimonas arsenicoxydans] gi|133738881|emb|CAL61928.1| 2-oxoglutarate dehydrogenase E1 component (Alpha-ketoglutarate dehydrogenase) [Herminiimonas arsenicoxydans] Length = 952 Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 6/118 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + ++ GD A A QG + E+ N+A +++I NNQ TS R + T + + Sbjct: 355 LPILIHGDAAFAGQGVIMETLNLAQTRGYGTGGTVHIIINNQIGFTTSDPRDTRSTLYCT 414 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 P + V+G D AV A+ Y + I+++++ YR GH+ D PA Sbjct: 415 DVAKMIEAPVIHVNGDDPEAVVFAAQIALDYRLEFRKDIVVDIVCYRKLGHNEQDTPA 472 >gi|91076192|ref|XP_967219.1| PREDICTED: similar to transketolase isoform 1 [Tribolium castaneum] gi|270014733|gb|EFA11181.1| hypothetical protein TcasGA2_TC004789 [Tribolium castaneum] Length = 628 Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust. Identities = 36/171 (21%), Positives = 68/171 (39%), Gaps = 18/171 (10%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G +++ G+A+ K V C GDG + +G ++ES + A + L N+ Sbjct: 122 GTGSLGQGLAIACGMAYVGKNFDKASYRVYCLVGDGESAEGSIWESLHFATYYKLDNLCV 181 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 + + N+ S + KR +F + VDG D+ + + C Sbjct: 182 IFDVNRLGQSEPTSLGHDIDTYRKRLEAFGFNVVAVDGHDVEELVKAFHVS---CNTKGK 238 Query: 274 PIIIEMLTYR------------YRGHSMSDPANYRTREEINEMRSNHDPIE 312 P I T++ + G + D A+ R + + + N P++ Sbjct: 239 PTAIIAKTFKGKNFPKIEDLENWHGKPLGDQAD-RVLQHLKSLVKNTGPLQ 288 >gi|94310988|ref|YP_584198.1| 2-oxoglutarate dehydrogenase E1 component [Cupriavidus metallidurans CH34] gi|93354840|gb|ABF08929.1| 2-oxoglutarate decarboxylase, thiamin-requiring (E1 component) [Cupriavidus metallidurans CH34] Length = 950 Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G + A + RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 336 GSSKARQERRGDVGHKEVLPVQVHGDAAFAGQGVVMETLNLAQTRGYGTGGTMHLVINNQ 395 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV M AV + ++++ Sbjct: 396 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVYAMQLAVDFRMEFNKDVVVD 455 Query: 279 MLTYRYRGHSMSD 291 ++ +R GH+ D Sbjct: 456 IICFRKLGHNEQD 468 >gi|313901598|ref|ZP_07835037.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermaerobacter subterraneus DSM 13965] gi|313468128|gb|EFR63603.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermaerobacter subterraneus DSM 13965] Length = 619 Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust. Identities = 47/240 (19%), Positives = 83/240 (34%), Gaps = 59/240 (24%) Query: 130 TGRQGGISKGKGGSMHMFSTK------NGFY----GGHGIV-----GAQVSLGTGIAFAN 174 TG Q K G H F+T +GF H IV G +S G+A A Sbjct: 56 TGHQAYPHKLVTGRFHRFATLRQTGGLSGFLKRDESPHDIVEAGHAGTSISHAVGLARAR 115 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV-------- 226 R V GDGA G +E+ N A +++ V+ +N ++ +V Sbjct: 116 DLRGEKHHVVAVIGDGALTAGMAFEALNHAGHLGTDLLIVLNDNSMSIAPNVGGLARYLT 175 Query: 227 ----------------------SRASAQT-----NFSKRGVSFNIPGMQVDGMDIRAVKA 259 R +Q F +PGM + + R + Sbjct: 176 QIRTDPAYERMRAELERVLEQLPRVGSQAVRWLQRFKDSLKYLVVPGMLFEALGFRYIGP 235 Query: 260 T-------MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDP 310 + + + R+ +GP+++ ++T + +G++ + DP + N +P Sbjct: 236 VDGYRLRDLIRVLESTRSMRGPVLVHVITQKGKGYAPAEGDPWTWHGPRPFNPATGKMEP 295 >gi|262280251|ref|ZP_06058035.1| 1-deoxyxylulose-5-phosphate synthase [Acinetobacter calcoaceticus RUH2202] gi|262258029|gb|EEY76763.1| 1-deoxyxylulose-5-phosphate synthase [Acinetobacter calcoaceticus RUH2202] Length = 637 Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust. Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 35/219 (15%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEE-KAGQLYGM 75 L + +R T +D +D P Q+L L++ +E + LY Sbjct: 5 LYTEIPTQRPVTPLLDAIDHP-------------QQLRQLEHSQLVQVADELRQYILYAA 51 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGR 132 G GG +G + V + T D+++ ++ + H + LTGR Sbjct: 52 GQSGGHFGANLGVVELTVALHYCFNTPNDRLVWDVGHQAYPHKV------------LTGR 99 Query: 133 QGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCF- 187 + ++ + K G + + + G+ +S G G++ A +Y+ +D VVC Sbjct: 100 REQMTTIRSKNGLAAFPAREESVFDTFGVGHSSTAISAGLGMSLARRYQ-NDPCEVVCIV 158 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GDGA G +E+ N A N ++I V+ +N ++ S Sbjct: 159 GDGAMTAGMAFEAMNDAVAHNADLIVVLNDNDMSISCST 197 >gi|256082057|ref|XP_002577279.1| transketolase [Schistosoma mansoni] gi|238662585|emb|CAZ33516.1| transketolase [Schistosoma mansoni] Length = 624 Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust. Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 10/126 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G VS+ G+A+ KY V C GDG + +G ++E+ ++ + L N++ + Sbjct: 115 GSLGQGVSIAAGMAYVGKYIDKASYRVYCVVGDGESTEGSIWEALAFSSFYKLDNLVIIF 174 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV-------KATMDKAVAY- 267 + N+ + R +F + VDG +I + + +K VA Sbjct: 175 DVNRLGQSQPTQLQHHLEAYRLRTEAFGCHSIVVDGHNIEELLKAFSCARTVKNKPVALI 234 Query: 268 CRAHKG 273 C+ +KG Sbjct: 235 CKTYKG 240 >gi|34496526|ref|NP_900741.1| 2-oxoglutarate dehydrogenase E1 component [Chromobacterium violaceum ATCC 12472] gi|34330299|gb|AAQ58746.2| 2-oxoglutarate dehydrogenase E1 component [Chromobacterium violaceum ATCC 12472] Length = 942 Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 18/137 (13%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-----ANQGQVYESFNIAALWNLNV---IYVI 215 G A + RR D + V+ GD A NQG +FN++ I+++ Sbjct: 333 GSVRARQERRKDTERKTAVPVLIHGDSAFGGLGVNQG----TFNLSQTRGYGTGGTIHIV 388 Query: 216 ENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 NNQ TS +R T + + P + V+G D AV M A+ Y K Sbjct: 389 INNQVGFTTSDTRDIRSTMYCTDVAKMIEAPILHVNGDDPEAVCYVMQAALDYRMTFKKD 448 Query: 275 IIIEMLTYRYRGHSMSD 291 ++I+++ YR GH+ D Sbjct: 449 VVIDLVCYRKLGHNEGD 465 >gi|21322713|emb|CAD22530.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Medicago truncatula] Length = 717 Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 16/98 (16%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFAN--KYRRSDK 181 I G+ MH NG G G G +S G G+A K R++D Sbjct: 150 ILTGRRDKMHTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAGLGMAVGRDLKGRKNDV 209 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + V+ GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 210 VAVI--GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 245 >gi|319761831|ref|YP_004125768.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans BC] gi|330826309|ref|YP_004389612.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans K601] gi|317116392|gb|ADU98880.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans BC] gi|329311681|gb|AEB86096.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans K601] Length = 630 Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust. Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 54/179 (30%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ---- 219 +S G+A A K + D+ + GDGA G +E+ N A + + +++ ++ +N Sbjct: 125 ISAALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNAGVADADLLVILNDNDMSIS 184 Query: 220 ------------------YA----MGTSVSRASAQ-------------------TNFSKR 238 YA +G SV R + T F K Sbjct: 185 PPVGALNRYLAQLMSGQFYAKARDVGKSVLRNAPPLLELAKRLEQQAKGMVVPATLFEKF 244 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANY 295 G ++ P +DG D+ ++ T++ R+ KGP + ++T + +G+ + +DP Y Sbjct: 245 GFNYIGP---IDGHDLDSLIPTLEN----IRSLKGPQFLHVVTKKGQGYKLAEADPVAY 296 >gi|182890016|gb|AAI65166.1| Tkt protein [Danio rerio] Length = 625 Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 16/162 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+ + L N++ ++ Sbjct: 122 GSLGQGLGAACGMAYTGKYLDKSSYRVYCMLGDGECSEGSVWEAMAFASHYKLDNLVAIL 181 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 + N+ + +R V+F VDG D+ + M +A KG P Sbjct: 182 DVNRLGQSEPAPLQHNVNVYKERCVAFGFNTYVVDGHDVEELCKYMWEA----EGVKGKP 237 Query: 275 IIIEMLTYRYRG-HSMSDPANY--------RTREEINEMRSN 307 I T++ +G + D N+ R E IN++ S Sbjct: 238 TAIVAKTFKGKGLKGIEDQDNWHGKPMPKDRAEELINDLLSQ 279 >gi|119472927|ref|ZP_01614800.1| alpha-ketoglutarate decarboxylase [Alteromonadales bacterium TW-7] gi|119444645|gb|EAW25954.1| alpha-ketoglutarate decarboxylase [Alteromonadales bacterium TW-7] Length = 939 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 53/230 (23%), Positives = 90/230 (39%), Gaps = 34/230 (14%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILA--CGVDASKIMAELTGRQGGISKGKGGSM 144 GQ+ ++GM A+R ++L G + S++ E G+ Sbjct: 253 GQQEAVIGM------------AHRGRLNVLVNVLGKNPSELFDEFAGKHKDTLSSGDVKY 300 Query: 145 HM-----FSTKNG-------FYGGHGIVGAQVSLGTGIAFANKYRRSDKI---CVVCFGD 189 HM F+TK G F H + V +G+ A ++ + I + GD Sbjct: 301 HMGYSSDFATKGGNVHMALAFNPSHLEIVNPVVMGSVRARLDRLGDTTGIKALPITIHGD 360 Query: 190 GAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNI 244 A QG V E+FN++ + I ++ NNQ TS T++ + Sbjct: 361 SAVTGQGVVQETFNLSQTNAFSCGGSIRIVVNNQVGFTTSKQDDVRSTDYCTDIAKMVQS 420 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+ D AV A+ + K ++I+++ YR GH+ +D N Sbjct: 421 PIFHVNSDDPEAVAFVTQIALDFRNKFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|157106042|ref|XP_001649141.1| transketolase [Aedes aegypti] gi|108879967|gb|EAT44192.1| transketolase [Aedes aegypti] Length = 627 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%) Query: 156 GHGIVGAQVSLGTGIAFANK-YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIY 213 G G +G V++ G+A+ K ++D V GDG + +G ++ES + A + L N+ Sbjct: 121 GTGSLGQGVAVACGMAYIGKNIDKADYRTYVLVGDGESAEGSIWESLHFAGHYKLDNLCV 180 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV-KATMDKAVAYCRAHK 272 + + N+ S + KR +F + VDG D+ + KA + +V R Sbjct: 181 IFDVNRLGQSEPTSLQHQMEVYRKRLDAFGFNAIVVDGHDVEELCKAFFEASVTKDR--- 237 Query: 273 GPIIIEMLTYR 283 P I T++ Sbjct: 238 -PTAIVAKTFK 247 >gi|325914050|ref|ZP_08176406.1| 2-oxoglutarate dehydrogenase E1 component [Xanthomonas vesicatoria ATCC 35937] gi|325539819|gb|EGD11459.1| 2-oxoglutarate dehydrogenase E1 component [Xanthomonas vesicatoria ATCC 35937] Length = 942 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ V ++++ NNQ TS +R A++ Sbjct: 348 RKTVLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVINNQIGFTTS-TRDDARS 406 Query: 234 NFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 407 TLYCTDVAKMIGAPVFHVNGDDPDAVMFVSKLAYEFRQQFKKDVVIDLVCYRRWGHNEAD 466 Query: 292 ------PANYRT 297 P Y+T Sbjct: 467 EPAATQPVMYQT 478 >gi|312963292|ref|ZP_07777775.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens WH6] gi|311282372|gb|EFQ60970.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens WH6] Length = 632 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 39/184 (21%), Positives = 68/184 (36%), Gaps = 48/184 (26%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + + SD+ + GDGA G +E+ N A N++ ++ Sbjct: 126 GVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVEANMLVIL 185 Query: 216 ENNQYAMGTSV------------SRASAQTNFSKRGVSFNIPGM---------------- 247 +N ++ +V SR A + V +PG Sbjct: 186 NDNDMSISRNVGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAWEIARRTEEYAKGMLV 245 Query: 248 --------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--D 291 +DG D+ + AT+ R KGP + ++T + +G + + D Sbjct: 246 PGTLFEELGWNYIGPIDGHDLPTLIATLRN----MRDLKGPQFLHIVTKKGKGFAPAEVD 301 Query: 292 PANY 295 P Y Sbjct: 302 PIGY 305 >gi|306820733|ref|ZP_07454360.1| 1-deoxy-D-xylulose-5-phosphate synthase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551232|gb|EFM39196.1| 1-deoxy-D-xylulose-5-phosphate synthase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 620 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A K ++ D V GD + G E N Sbjct: 107 SLHDAFNTGHS--STSISAGIGMAIAKKLKKEDYDVVSVIGDSSICSGLALEGLNFLGHS 164 Query: 208 NLNVIYVIENNQYAMGTSV 226 NL+V+ V+ +N+ ++ +V Sbjct: 165 NLDVLIVLNDNEMSIDKNV 183 >gi|71405591|ref|XP_805402.1| 2-oxoglutarate dehydrogenase E1 component [Trypanosoma cruzi strain CL Brener] gi|70868796|gb|EAN83551.1| 2-oxoglutarate dehydrogenase E1 component, putative [Trypanosoma cruzi] Length = 1006 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 11/135 (8%) Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 AQ SLG K S + V GD A + QG V+E+ I+ + + ++V+ Sbjct: 393 AAQASLG-------KDGSSTVLPVEIHGDAAFSGQGIVFETMCISEVEEYSTGGTVHVVV 445 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ T + + + G F P V+G + V + A + K ++ Sbjct: 446 NNQIGFTTDPKSSRSSAYCTDLGRVFQCPIFHVNGDSVEDVVRVFEFAADFRAKFKKSVV 505 Query: 277 IEMLTYRYRGHSMSD 291 I+++ YR GH+ +D Sbjct: 506 IDLVCYRRFGHNEND 520 >gi|204929137|ref|ZP_03220280.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321681|gb|EDZ06880.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 276 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 16/165 (9%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKI-CVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K RR +++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLARRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIR---AVKATMDKAVAYCRA- 270 I+ N+ + + + + +F + V G DI AV M A A R Sbjct: 173 IDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAVVQPMPPADAQPRVV 232 Query: 271 ------HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHD 309 +G +E LT + ++D E I+++ HD Sbjct: 233 ILDSIKGQGVPCLEQLTNSHH-LRLTDGMKQTLNEAIHQLEVMHD 276 >gi|78776676|ref|YP_392991.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfurimonas denitrificans DSM 1251] gi|118595630|sp|Q30TC5|DXS_SULDN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|78497216|gb|ABB43756.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Sulfurimonas denitrificans DSM 1251] Length = 606 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 11/156 (7%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IV M ++ D I +++ + H L G D + E G G Sbjct: 30 GGHLSSTLGATEIIVAMHEVFDSKKDPFIFDVSHQSYAHKLLTGRWDKFDTLREFNGLCG 89 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH + +G A A K ++ +I V+ GDG+ Sbjct: 90 YTKPSE-------SEHDYFVAGHSSTSISLGVGAAKAIALKGEQNSRIPVIMIGDGSMTA 142 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 G VYE+ N ++ ++ +N+ ++ + S Sbjct: 143 GMVYEALNELGERKYPMVIILNDNEMSISKPIGAIS 178 >gi|62752851|ref|NP_001015866.1| transketolase [Xenopus (Silurana) tropicalis] gi|59861869|gb|AAH90380.1| MGC107778 protein [Xenopus (Silurana) tropicalis] Length = 627 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 11/168 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ K+ V C GDG ++G V+E+ A + L N++ + Sbjct: 123 GSLGQGLGAACGMAYTGKFFDKASYRVFCLLGDGEVSEGSVWEAMAFAGFYKLDNLVAIF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+C P Sbjct: 183 DVNRLGQSDPAPLQHKVEVYQKRCEAFGWHSVVVDGHSVEEL------CKAFCHVKNQPT 236 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 I T++ +G S + D N+ + ++ I+++ ++ NK Sbjct: 237 AIIAKTFKGKGISGVEDKENWHGKPLPKDLAEQS--IKEIEGKIKSNK 282 >gi|157114119|ref|XP_001652168.1| 2-oxoglutarate dehydrogenase [Aedes aegypti] gi|108877402|gb|EAT41627.1| 2-oxoglutarate dehydrogenase [Aedes aegypti] Length = 1016 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 34/171 (19%), Positives = 74/171 (43%), Gaps = 4/171 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A + QG VYE+ +++ L + ++++ NNQ T + + + Sbjct: 406 MSILLHGDAAFSGQGVVYETMHLSDLPDYTTHGTVHIVVNNQIGFTTDPRHSRSSPYCTD 465 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV A + +II++++YR GH+ D + Sbjct: 466 VARVVNAPIFHVNSDDPEAVMHVCRVAAEWRATFHKDVIIDLVSYRRNGHNEIDEPMFTQ 525 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++R ++ +L+ + ++K ++ KI + ++E A+ Sbjct: 526 PLMYKKIRGIKPVLDIYANQLIAEGCVTADEVKSVKDKYEKICDEAMEQAK 576 >gi|83590354|ref|YP_430363.1| 1-deoxy-D-xylulose-5-phosphate synthase [Moorella thermoacetica ATCC 39073] gi|118595590|sp|Q2RIB9|DXS_MOOTA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|83573268|gb|ABC19820.1| 1-deoxy-D-xylulose-5-phosphate synthase [Moorella thermoacetica ATCC 39073] Length = 640 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 2/84 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G+A A + D V GDGA G +E+ N A Sbjct: 106 SPYDAFDTGHS--STSISAALGMALARDLKGEDYQVVAVIGDGALTGGMAFEAMNHAGHL 163 Query: 208 NLNVIYVIENNQYAMGTSVSRASA 231 N+I V+ +N+ ++ V +A Sbjct: 164 QANLIVVLNDNEMSIAPPVGGLAA 187 >gi|154244114|ref|YP_001415072.1| 2-oxoglutarate dehydrogenase E1 component [Xanthobacter autotrophicus Py2] gi|154158199|gb|ABS65415.1| 2-oxoglutarate dehydrogenase, E1 subunit [Xanthobacter autotrophicus Py2] Length = 984 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E ++ L I+VI NNQ T+ + + Sbjct: 381 RTKVLPLLLHGDAAFAGQGVVAECLGLSGLKGHRTGGSIHVIINNQIGFTTNPRYSRSSP 440 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P +G D +V A + + P++I+M YR GH+ D Sbjct: 441 YPSDVAKMIEAPIFHCNGDDPESVVFCAKVATEFRQRFHKPVVIDMFCYRRFGHNEGDEP 500 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + + +R + +E K+L + G++ + R+ + E Q+ K P Sbjct: 501 AFTQPKMYKVIRQHPSVLELYTKKLEAEGVVTSGEVDTMRAAWRERLEAEHEAGQAYK-P 559 Query: 354 DPAE 357 + A+ Sbjct: 560 NKAD 563 >gi|331082305|ref|ZP_08331431.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium 6_1_63FAA] gi|330400791|gb|EGG80392.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium 6_1_63FAA] Length = 618 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGISKGKG-GSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G + G M F + + F GH +S G G A ++ + Sbjct: 80 LTGRKEGFDGLRTLGGMSGFPKRCESPCDAFDTGHS--STSISAGVGYVRARDLKQENYH 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 V GDGA G YE+ N A++ N I V+ +N+ ++ +V S+ Sbjct: 138 VVSIIGDGALTGGMAYEALNNASVLKKNFIVVLNDNEMSISENVGGISS 186 >gi|239628921|ref|ZP_04671952.1| transketolase [Clostridiales bacterium 1_7_47_FAA] gi|239519067|gb|EEQ58933.1| transketolase [Clostridiales bacterium 1_7_47FAA] Length = 287 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 5/117 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A + V GDG +G V+E F + L N+ VI+ Sbjct: 123 GSLGHGLPVSIGMALACRMDGRKNRMYVVMGDGELAEGSVWEGFMAGGHYKLDNLCAVID 182 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 N+ + S N R SF +QV+G D+ +D+A R KG Sbjct: 183 RNRLQISGSTEDVMHHENLEDRIKSFGWHVIQVNGNDMD----ELDRAFEEARNTKG 235 >gi|225025166|ref|ZP_03714358.1| hypothetical protein EIKCOROL_02059 [Eikenella corrodens ATCC 23834] gi|224942127|gb|EEG23336.1| hypothetical protein EIKCOROL_02059 [Eikenella corrodens ATCC 23834] Length = 626 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 54/283 (19%), Positives = 106/283 (37%), Gaps = 88/283 (31%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR + + +M + GF Y G+ + S+G G+A A+K S Sbjct: 84 LTGR-----RNRMHTMRQYGGLAGFPKRSESEYDDFGVGHSSTSIGAALGMAVADKLSGS 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV------------- 226 V GDGA GQ +E+ N A + +++ ++ +N+ ++ +V Sbjct: 139 LNRSVAVIGDGAMTAGQAFEALNNAGDMDTDLLVILNDNEMSISPNVGAFPKYLAGSQGK 198 Query: 227 ----------------------------------------SRASAQTNFSKRGVSFNIPG 246 SR + F G ++ P Sbjct: 199 DWRDTLRSIKHKSEKVLDKLPGALHIAQKVEQRLKSVLDGSRIRPDSLFDNFGFTYTGP- 257 Query: 247 MQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEM 304 VDG D+R + A + + + KGP ++ +LT + +G+ ++ DP + + + Sbjct: 258 --VDGHDVRQLVAVLKE----MKQRKGPQLLHVLTQKGQGYKLAENDPVGFHA---VGKF 308 Query: 305 RSNHDPIE---------QVRKRLLHNKWASEGDLKEIEMNVRK 338 + P+ Q+ + + ++ A++G L I +R+ Sbjct: 309 NPDQGPVSGGAAPLSYTQIFGQWVCDQAATDGKLVAITPAMRE 351 >gi|167771459|ref|ZP_02443512.1| hypothetical protein ANACOL_02825 [Anaerotruncus colihominis DSM 17241] gi|167666099|gb|EDS10229.1| hypothetical protein ANACOL_02825 [Anaerotruncus colihominis DSM 17241] Length = 286 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S GIA N+ + D GDG N+G+V+E+ A +L+ I ++ Sbjct: 117 GSLGQGISSAVGIALGNRLQGRDSWVYCIVGDGETNEGEVWEACEAANHLSLDHFILFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N+ + + + ++ SF + V G D+ + + +A Sbjct: 177 WNKKQLDGRLEDICKPMDLEEKFRSFGFDTVTVKGYDVEEIWNAIQRA 224 >gi|149369605|ref|ZP_01889457.1| 1-deoxy-D-xylulose-5-phosphate synthase [unidentified eubacterium SCB49] gi|149357032|gb|EDM45587.1| 1-deoxy-D-xylulose-5-phosphate synthase [unidentified eubacterium SCB49] Length = 592 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 30/202 (14%) Query: 100 TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 T D++I ++ +GH + G + + + R GIS G S + F GH Sbjct: 64 TPTDKLIWDVGHQAYGHKILTG---RREVFDTNRRLNGIS---GFPKMTESPYDAFGTGH 117 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 +S G+A A K + + + GD + G +E+ N A + N N++ V+ + Sbjct: 118 S--STSISAILGMAMAAKLKGLKRQHIAVIGDASIASGMAFEALNHAGVTNTNLLIVLND 175 Query: 218 NQYAMGTSVSRASAQTNFSK-------------RGVSFNIPGMQVDGMDIRAVKATMDKA 264 N A+G S + + F+K ++FN G +DG +I + + M + Sbjct: 176 N--AIGIDPSVGALKQYFTKVTLDGAPETDNIFEALNFNYSG-PIDGHNIETLISEMRR- 231 Query: 265 VAYCRAHKGPIIIEMLTYRYRG 286 + +GP ++ ++T + +G Sbjct: 232 ---LQKLEGPKVLHIITKKGKG 250 >gi|133777215|gb|AAH28707.4| Transketolase-like 2 [Homo sapiens] Length = 626 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+F A+ +NL N++ V Sbjct: 124 GSLGQGLGTACGMAYTGKYLDKASYRVFCLMGDGESSEGSVWEAFAFASHYNLDNLVAVF 183 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + +F VDG D+ A+ +A + P Sbjct: 184 DVNRLGQSGPAPLEHGADIYQNCCEAFGWNTYLVDGHDVEALCQAFWQA---SQVKNKPT 240 Query: 276 IIEMLTYRYRG-HSMSDPANY 295 I T++ RG ++ D N+ Sbjct: 241 AIVAKTFKGRGIPNIEDAENW 261 >gi|241668496|ref|ZP_04756074.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877030|ref|ZP_05249740.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843051|gb|EET21465.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 618 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 52/216 (24%) Query: 129 LTGRQGG-ISKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I+ K G + F + + F GH +LG IA + + S I Sbjct: 84 LTGRKDKLITIKKDGGISGFPKRSESEYDTFGVGHSSTSISAALGMAIADRLQGKHSSSI 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK----- 237 V+ GDGA G +E+ N A +++ ++ +N+ ++ +V SA FSK Sbjct: 144 AVI--GDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAH--FSKIISGG 199 Query: 238 ---------RGVSFNIPGM---------QVDGMDIRA---------VKATMD-------- 262 + V NIP M Q GM + A +D Sbjct: 200 FYNSIREKGKEVLKNIPPMFEFVKKIETQTKGMFVPANFFEDLGFYYVGPIDGHNVVELV 259 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYR 296 K + + HKGP ++ ++T + +G++ SDP + Sbjct: 260 KTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFH 295 >gi|260588127|ref|ZP_05854040.1| 1-deoxy-D-xylulose-5-phosphate synthase [Blautia hansenii DSM 20583] gi|260541654|gb|EEX22223.1| 1-deoxy-D-xylulose-5-phosphate synthase [Blautia hansenii DSM 20583] Length = 618 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGISKGKG-GSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G + G M F + + F GH +S G G A ++ + Sbjct: 80 LTGRKEGFDGLRTLGGMSGFPKRCESPCDAFDTGHS--STSISAGVGYVRARDLKQENYH 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 V GDGA G YE+ N A++ N I V+ +N+ ++ +V S+ Sbjct: 138 VVSIIGDGALTGGMAYEALNNASVLKKNFIVVLNDNEMSISENVGGISS 186 >gi|156938054|ref|YP_001435850.1| transketolase subunit A [Ignicoccus hospitalis KIN4/I] gi|156567038|gb|ABU82443.1| transketolase subunit A [Ignicoccus hospitalis KIN4/I] Length = 279 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 7/125 (5%) Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAMG 223 S TG+A K + S K V GDG ++G+V+E+ + AA +L N+ V++ N + + Sbjct: 134 SFATGVAKGLKMKGSKKRVYVVLGDGELDEGEVWEAASTAAAHSLDNLTAVVDWNGFQLD 193 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLT 281 + + + + +F + V DG D+ A++ +A+ + KG P +I T Sbjct: 194 GETFKVKNKGDLIGKWKAFGWHVIVVDDGHDV----ASLLEALEEAKNVKGKPTVILAKT 249 Query: 282 YRYRG 286 R +G Sbjct: 250 VRGKG 254 >gi|167644203|ref|YP_001681866.1| 2-oxoglutarate dehydrogenase E1 component [Caulobacter sp. K31] gi|167346633|gb|ABZ69368.1| 2-oxoglutarate dehydrogenase, E1 subunit [Caulobacter sp. K31] Length = 987 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 4/118 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L I+ I NNQ T+ + + Sbjct: 386 RGHVLPLLLHGDAAFAGQGVVAECFTLSGLKGYRTGGTIHFIVNNQIGFTTNPRYSRSSP 445 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 S + P V+G D AV A Y + ++I+M YR GH+ D Sbjct: 446 YPSDVALMVEAPIFHVNGDDPEAVVFAAKVATEYRQMFGKDVVIDMFCYRRFGHNEGD 503 >gi|157114121|ref|XP_001652169.1| 2-oxoglutarate dehydrogenase [Aedes aegypti] gi|108877403|gb|EAT41628.1| 2-oxoglutarate dehydrogenase [Aedes aegypti] Length = 1057 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 34/171 (19%), Positives = 74/171 (43%), Gaps = 4/171 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A + QG VYE+ +++ L + ++++ NNQ T + + + Sbjct: 406 MSILLHGDAAFSGQGVVYETMHLSDLPDYTTHGTVHIVVNNQIGFTTDPRHSRSSPYCTD 465 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV A + +II++++YR GH+ D + Sbjct: 466 VARVVNAPIFHVNSDDPEAVMHVCRVAAEWRATFHKDVIIDLVSYRRNGHNEIDEPMFTQ 525 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 ++R ++ +L+ + ++K ++ KI + ++E A+ Sbjct: 526 PLMYKKIRGIKPVLDIYANQLIAEGCVTADEVKSVKDKYEKICDEAMEQAK 576 >gi|167758091|ref|ZP_02430218.1| hypothetical protein CLOSCI_00429 [Clostridium scindens ATCC 35704] gi|167663988|gb|EDS08118.1| hypothetical protein CLOSCI_00429 [Clostridium scindens ATCC 35704] Length = 620 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G + K G M F + + F GH +S G G A + D Sbjct: 79 LTGRKAGFDELRKYGGMSGFPKRKESACDAFDTGHS--STSISAGLGYVQARDLKGEDYS 136 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDG+ G YE+ N A+ N I V+ +N ++ +V Sbjct: 137 VVSVIGDGSLTGGMAYEALNNASSLKTNFIIVLNDNHMSISENV 180 >gi|312884956|ref|ZP_07744646.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio caribbenthicus ATCC BAA-2122] gi|309367433|gb|EFP94995.1| 2-oxoglutarate dehydrogenase E1 component [Vibrio caribbenthicus ATCC BAA-2122] Length = 941 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 5/118 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+FN++ V + ++ NNQ TS + T + + Sbjct: 353 LPITIHGDSAIAGQGVVAETFNMSLARGYKVGGTVRIVVNNQVGFTTSNPSDTRSTMYCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+ D AV A+ Y K ++I+++ YR GH+ +D N Sbjct: 413 DIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|253681596|ref|ZP_04862393.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum D str. 1873] gi|253561308|gb|EES90760.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum D str. 1873] Length = 619 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 70/187 (37%), Gaps = 53/187 (28%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +LG A K + + I V+ GDGA G E+ N N+I Sbjct: 112 FETGHSSTSISAALGMARARDLKGEKHNVIAVI--GDGALTGGMAIEALNDVGDKKTNLI 169 Query: 213 YVIENNQYAMG-------TSVSRASAQTNFSKRGVSFN---------------------- 243 ++ +NQ ++G T +SR ++K FN Sbjct: 170 IILNDNQMSIGKNVGGVSTYLSRIRIDPKYNKFKSDFNDILRKTNIGNGVADSISKIKSG 229 Query: 244 -----IPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +PGM +DG +IR + M A + KGP++I +T + +G+ Sbjct: 230 IKQILVPGMFFEEMGIKYLGPIDGHNIRELTKVMTMA----KEIKGPVLIHTITQKGKGY 285 Query: 288 SMS--DP 292 + DP Sbjct: 286 KFAEKDP 292 >gi|148744796|gb|AAI43054.1| Transketolase-like 2 [synthetic construct] Length = 626 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+F A+ +NL N++ V Sbjct: 124 GSLGQGLGTACGMAYTGKYLDKASYRVFCLMGDGESSEGSVWEAFAFASHYNLDNLVAVF 183 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + +F VDG D+ A+ +A + P Sbjct: 184 DVNRLGQSGPAPLEHGADIYQNCCEAFGWNTYLVDGHDVEALCQAFWQA---SQVKNKPT 240 Query: 276 IIEMLTYRYRG-HSMSDPANY 295 I T++ RG ++ D N+ Sbjct: 241 AIVAKTFKGRGIPNIEDAENW 261 >gi|125974928|ref|YP_001038838.1| transketolase subunit A [Clostridium thermocellum ATCC 27405] gi|256003815|ref|ZP_05428802.1| Transketolase domain protein [Clostridium thermocellum DSM 2360] gi|281418607|ref|ZP_06249626.1| Transketolase domain protein [Clostridium thermocellum JW20] gi|125715153|gb|ABN53645.1| transketolase subunit A [Clostridium thermocellum ATCC 27405] gi|255992153|gb|EEU02248.1| Transketolase domain protein [Clostridium thermocellum DSM 2360] gi|281407691|gb|EFB37950.1| Transketolase domain protein [Clostridium thermocellum JW20] gi|316939138|gb|ADU73172.1| Transketolase domain-containing protein [Clostridium thermocellum DSM 1313] Length = 278 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + L TG+A A K + + V GDG +G +E+ A+ + L N+ ++I+ Sbjct: 118 GSLGHGLGLATGMALALKMSKKNNRVFVLTGDGELAEGSNWEAAMAASKFKLKNLTWIID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N + + N ++ +F + ++G D+ ++ ++ Sbjct: 178 RNYLQISGNTEDIMPLENLKQKTEAFGFHTLVINGHDLDEIREALE 223 >gi|319763054|ref|YP_004126991.1| transketolase domain-containing protein [Alicycliphilus denitrificans BC] gi|330825133|ref|YP_004388436.1| transketolase [Alicycliphilus denitrificans K601] gi|317117615|gb|ADV00104.1| Transketolase domain-containing protein [Alicycliphilus denitrificans BC] gi|329310505|gb|AEB84920.1| Transketolase [Alicycliphilus denitrificans K601] Length = 275 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 60/263 (22%), Positives = 101/263 (38%), Gaps = 9/263 (3%) Query: 62 IRRFEEKAGQLYGMGMVG---GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 IRR + G++ G G VG G+ + A + + E D HGH Sbjct: 14 IRRHAVRMGEVQGQGYVGQALGYADVLATAYAHALDFRPDDPEWDGRDRFLLSHGHYAIA 73 Query: 119 GVDA---SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 A + I+AE G + M S G G +G + + G+A + Sbjct: 74 HYAALIEAGIIAESELETYGSDDSRLPMSGMASYTPGMEMSGGSLGQGLPIAVGMALGLR 133 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSVSRASAQT 233 +R + DG ++G +E+ AA L N++ +++ NNQ A G S SR Sbjct: 134 HRGNPAFVYNSMSDGELDEGSTWEAALSAAHHGLGNLVCIVDINNQQADGPS-SRVMGFE 192 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + +F +VDG + AV D A + I+ + L + + Sbjct: 193 PLADKWAAFGWHVQRVDGNHLPAVVRAFDTARNLAESRPRVILCDTLMGKGVPFLEARDK 252 Query: 294 NYRTREEINEMRSNHDPIEQVRK 316 N+ R E +E + D ++ R Sbjct: 253 NHFIRVEPSEWQQALDALDANRP 275 >gi|298481729|ref|ZP_06999919.1| transketolase, N- subunit [Bacteroides sp. D22] gi|298271951|gb|EFI13522.1| transketolase, N- subunit [Bacteroides sp. D22] Length = 268 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 4/133 (3%) Query: 139 GKGGSMHMFSTKNGFYG---GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG 195 GK GS + T + G G +G + + GIA A K R V GDG ++G Sbjct: 91 GKNGSRLLSHTSHYIPGIEISAGSLGHGLPIACGIALAAKRRGQKYRTYVIVGDGEMDEG 150 Query: 196 QVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 +E+ +A+ L N+ +I+ N+ + + F + +FN +Q+DG + Sbjct: 151 SNWEALLLASHLELDNLCLIIDYNKIQSLGATNEVLNLEPFKSKLEAFNWNVIQIDGHNH 210 Query: 255 RAVKATMDKAVAY 267 A++ +A A+ Sbjct: 211 EAIRRAFIQAEAF 223 >gi|133778974|ref|NP_115512.3| transketolase-like protein 2 [Homo sapiens] gi|74717985|sp|Q9H0I9|TKTL2_HUMAN RecName: Full=Transketolase-like protein 2 gi|12053071|emb|CAB66713.1| hypothetical protein [Homo sapiens] gi|49065546|emb|CAG38591.1| DKFZP434L1717 [Homo sapiens] gi|117644978|emb|CAL37955.1| hypothetical protein [synthetic construct] gi|119625243|gb|EAX04838.1| transketolase-like 2 [Homo sapiens] gi|148921706|gb|AAI46699.1| Transketolase-like 2 [synthetic construct] gi|261858026|dbj|BAI45535.1| transketolase-like protein 2 [synthetic construct] Length = 626 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+F A+ +NL N++ V Sbjct: 124 GSLGQGLGTACGMAYTGKYLDKASYRVFCLMGDGESSEGSVWEAFAFASHYNLDNLVAVF 183 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + +F VDG D+ A+ +A + P Sbjct: 184 DVNRLGQSGPAPLEHGADIYQNCCEAFGWNTYLVDGHDVEALCQAFWQA---SQVKNKPT 240 Query: 276 IIEMLTYRYRG-HSMSDPANY 295 I T++ RG ++ D N+ Sbjct: 241 AIVAKTFKGRGIPNIEDAENW 261 >gi|285018444|ref|YP_003376155.1| 2-oxoglutarate dehydrogenase [Xanthomonas albilineans GPE PC73] gi|283473662|emb|CBA16165.1| probable 2-oxoglutarate dehydrogenase protein [Xanthomonas albilineans] Length = 941 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + V+ GD A A QG V E F ++ V ++++ NNQ TS +R A++ Sbjct: 347 RKSVLPVIIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVINNQIGFTTS-ARDDARS 405 Query: 234 NFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV + A + + ++I+++ YR GH+ +D Sbjct: 406 TLYCTDVAKMIGAPVFHVNGDDPDAVAFVANIAYDFRQKFNKDVVIDLVCYRRWGHNEAD 465 Query: 292 ------PANYRT 297 P Y+T Sbjct: 466 EPAATQPVMYQT 477 >gi|227328539|ref|ZP_03832563.1| putative transketolase N-terminal section [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 276 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K S + V GDG +G +E+ AA + L N+I + + Sbjct: 121 GALGHGLPVAVGIALAAKRDNSPRRVFVLTGDGELAEGSNWEAALAAAHYQLDNLIIIND 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N+ + S +++ +F + + G D+R+V T++ Sbjct: 181 KNKLQLAGPTSSIMNTDPLAEKWQAFGLEVTECAGNDMRSVVETLE 226 >gi|117553508|gb|ABK35283.1| deoxyxylulose-5-phosphate synthase [Adonis aestivalis var. palaestina] Length = 717 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 70/188 (37%), Gaps = 33/188 (17%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH +G G G G +S G G+A Sbjct: 147 ILTGRRSKMHTIRQTSGLAGFPKRDESDHDAFGAGHSSTSISAGLGMAVGRDLLGKSNHV 206 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY----------------AMGTSVS 227 + GDGA GQ YE+ N A + N+I V+ +N+ A+ +++S Sbjct: 207 ISVIGDGAMTAGQAYEAMNNAGFLDSNLIVVLNDNKQVSLPTATLDGPATPVGALSSALS 266 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY--- 284 + A + F K + Q+ G + + A +D+ + +G + E L Y Sbjct: 267 KLQASSKFRKLREAAKKVTKQIGG-QTQEIAAKVDEYARGMMSAQGSTLFEELGLYYIGP 325 Query: 285 -RGHSMSD 291 GH++ D Sbjct: 326 VDGHNVED 333 >gi|296109949|ref|YP_003616898.1| Transketolase domain protein [Methanocaldococcus infernus ME] gi|295434763|gb|ADG13934.1| Transketolase domain protein [Methanocaldococcus infernus ME] Length = 269 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S G+A K V GDG +G V+E+ AA + L N+I +++ Sbjct: 114 GSLGQGFSASVGMAIGYKLDNLKNYIYVLLGDGECQEGIVWEAAMAAAHYKLDNLIAIVD 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + + A + ++ +F ++DG + + + T++KA Sbjct: 174 RNYLQIDGNTEEVMALGDLKEKFKAFGWDTFEIDGHNFKEIIETINKA 221 >gi|308800422|ref|XP_003074992.1| Dxs 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor (IC) [Ostreococcus tauri] gi|119358853|emb|CAL52263.2| Dxs 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor (IC) [Ostreococcus tauri] Length = 741 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 8/97 (8%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ ++ + G + F+ + + F GH +S G G+A A + D Sbjct: 165 LTGRRDKMNTMRQTGGLSPFTKRSESPYDCFGAGHS--STSISAGLGMAVARDMQGEDFH 222 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA G YE+ N A + N+I ++ +NQ Sbjct: 223 VISIIGDGAITGGMAYEAMNNAGFLDTNMIIILNDNQ 259 >gi|157817486|ref|NP_001103004.1| transketolase-like protein 1 [Rattus norvegicus] gi|149029880|gb|EDL84992.1| rCG43880 [Rattus norvegicus] Length = 596 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G G + G+A+ KY V C GD + +G V+E+F A+ +NL N++ + Sbjct: 94 GWPGQGLGAARGMAYTGKYFDQASYRVFCLLGDEESTEGSVWEAFAFASYYNLDNLMAIF 153 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ +S+S + KR +F VDG ++ + +A + P Sbjct: 154 DVNRIGHSSSMSVEHCVGIYQKRCEAFGWNTYVVDGRNVETLCRVFSQAA---QVRGKPT 210 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 211 AVVAKTFKARG 221 >gi|78221772|ref|YP_383519.1| transketolase subunit A [Geobacter metallireducens GS-15] gi|78193027|gb|ABB30794.1| transketolase subunit A [Geobacter metallireducens GS-15] Length = 286 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 4/132 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A + S GDG +GQV+E+ A + L N+ +++ Sbjct: 127 GSLGQGLSMANGMALGLRLDGSSSRVYALLGDGELQEGQVWEAAMAAGHYKLDNLCALVD 186 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + V++ A + + +F + +DG D+ A+ + +A A P + Sbjct: 187 VNRLQIDGEVAKVMAVEPVTDKFRAFGWNVIDIDGHDMGAIVTALGQA---AEAKGKPTV 243 Query: 277 IEMLTYRYRGHS 288 I T + +G S Sbjct: 244 IVARTVKGKGVS 255 >gi|301061745|ref|ZP_07202486.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [delta proteobacterium NaphS2] gi|300444205|gb|EFK08229.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [delta proteobacterium NaphS2] Length = 658 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 1/107 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G GIA+A +Y V GDG +GQ YE+ A + N+ +++ Sbjct: 134 GSLGMGISKGRGIAWAKQYLGRGGHVFVMTGDGELQEGQNYEAMQSAVQQGVGNLTVIVD 193 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 +N+ V+R + K+ +F + DG D A+ ++ Sbjct: 194 HNKVQSDREVARIVNLQDLEKKLSAFGWEVARCDGHDQHALARVFER 240 >gi|296282072|ref|ZP_06860070.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citromicrobium bathyomarinum JL354] Length = 643 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +GG + F+ + + F H +S G G A ANK + Sbjct: 90 LTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHS--STSISAGIGFAMANKLQDKPGR 147 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDGA + G YE+ N A ++ ++ +N ++ V SA Sbjct: 148 AIAVIGDGAMSAGMAYEAMNNAEQAGNRLVVILNDNDMSIAPPVGGLSA 196 >gi|16552972|dbj|BAB71427.1| unnamed protein product [Homo sapiens] Length = 626 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+F A+ +NL N++ V Sbjct: 124 GSLGQGLGTACGMAYTGKYLDKASYRVFCLMGDGESSEGSVWEAFAFASHYNLDNLVAVF 183 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + +F VDG D+ A+ +A + P Sbjct: 184 DVNRLGQSGPAPLEHGADIYQNCCEAFGWNTYLVDGHDVEALCQAFWQA---SQVKNKPT 240 Query: 276 IIEMLTYRYRG-HSMSDPANY 295 I T++ RG ++ D N+ Sbjct: 241 AIVAKTFKGRGIPNIEDAENW 261 >gi|238924567|ref|YP_002938083.1| 1-deoxy-D-xylulose-5-phosphate synthase [Eubacterium rectale ATCC 33656] gi|238876242|gb|ACR75949.1| 1-deoxy-D-xylulose-5-phosphate synthase [Eubacterium rectale ATCC 33656] Length = 618 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISKGKG-GSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G S + G M F S + F GH +S G G+A A + D Sbjct: 80 LTGRKDGFSSLRQYGGMSGFPKADESDCDCFNTGHS--STSISAGLGLATARQVTGEDYH 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G YE+ N A+ N I V+ +N ++ +V Sbjct: 138 VVSVIGDGALTGGMAYEALNNASSVKGNFIIVLNDNNMSISENV 181 >gi|166711496|ref|ZP_02242703.1| alpha-ketoglutarate decarboxylase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 942 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ V ++++ NNQ TS +R A++ Sbjct: 348 RKTVLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVINNQIGFTTS-TRDDARS 406 Query: 234 NFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 407 TLYCTDVAKMIGAPVFHVNGDDPDAVMFVSKLAYEFRQQFKKDVVIDLVCYRRWGHNEAD 466 Query: 292 ------PANYRT 297 P Y+T Sbjct: 467 EPAATQPVMYQT 478 >gi|117920157|ref|YP_869349.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella sp. ANA-3] gi|117612489|gb|ABK47943.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella sp. ANA-3] Length = 939 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 11/116 (9%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS----VSRASAQTNF 235 + GD A A QG V E+FN++ V I ++ NNQ TS V T+ Sbjct: 359 ITIHGDSAIAGQGIVQETFNMSQTRGFKVGGSIRIVVNNQVGFTTSNHFDVRSTEYCTDI 418 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +K P V+ D AV AV Y K ++I+++ YR GH+ +D Sbjct: 419 AKM---VQAPIFHVNSDDPEAVAFVAQLAVDYRNEFKRDVVIDLVCYRRHGHNEAD 471 >gi|300772339|ref|ZP_07082209.1| transketolase [Sphingobacterium spiritivorum ATCC 33861] gi|300760642|gb|EFK57468.1| transketolase [Sphingobacterium spiritivorum ATCC 33861] Length = 282 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 5/127 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G A A K + + + V GDG +GQV+E+ A + N+I ++ Sbjct: 119 GSLGQGLSVAIGAAQAKKLNKDNNLVYVLMGDGELQEGQVWEAAMYAPHNKIDNLIATVD 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 N+ + S + + + + +F +++ G D+ AV A +++A + R KG P Sbjct: 179 YNKAQIDGSTDQVLSLGDLRGKWEAFGWDVLEIAKGNDMTAVVAGLEEAKS--RTGKGKP 236 Query: 275 IIIEMLT 281 ++I M T Sbjct: 237 VVILMHT 243 >gi|133777956|gb|AAI25102.1| Transketolase-like 2 [Homo sapiens] gi|148744456|gb|AAI42944.1| Transketolase-like 2 [Homo sapiens] gi|148745380|gb|AAI43055.1| Transketolase-like 2 [synthetic construct] Length = 626 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+F A+ +NL N++ V Sbjct: 124 GSLGQGLGTACGMAYTGKYLDKASYRVFCLMGDGESSEGSVWEAFAFASHYNLDNLVAVF 183 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + +F VDG D+ A+ +A + P Sbjct: 184 DVNRLGQSGPAPLEHGADIYQNCCEAFGWNTYLVDGHDVEALCQAFWQA---SQVKNKPT 240 Query: 276 IIEMLTYRYRG-HSMSDPANY 295 I T++ RG ++ D N+ Sbjct: 241 AIVAKTFKGRGIPNIEDAENW 261 >gi|126660199|ref|ZP_01731316.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. CCY0110] gi|126618501|gb|EAZ89253.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. CCY0110] Length = 636 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 17/131 (12%) Query: 120 VDASKIMAELTGRQGGISKGKGGSMHMFST---KNGFYG------------GHGIVGAQV 164 +D K++ ++ G Q K G H F T K+G G G G + Sbjct: 61 LDRDKVIWDV-GHQAYPHKMLTGRYHRFHTLRQKDGIAGYLKRCESKFDHFGAGHASTSI 119 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMG 223 S G G+A A + D V GDGA G E+ N A L N N++ V+ +N+ ++ Sbjct: 120 SAGLGMALARDAKGEDYKVVSIIGDGALTGGMALEAINHAGHLPNTNLMVVLNDNEMSIS 179 Query: 224 TSVSRASAQTN 234 +V S N Sbjct: 180 PNVGAISRYLN 190 >gi|31872040|gb|AAP59458.1| transketolase [Danio rerio] Length = 625 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 16/162 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+ + L N++ ++ Sbjct: 122 GSLGQGLGAACGMAYTGKYLDKSSYRVYCMLGDGECSEGSVWEAMAFASHYKLDNLVAIL 181 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 + N+ + +R +F VDG D+ + KA+ + KG P Sbjct: 182 DVNRLGQSEPAPLQHNVNVYKERCEAFGFNTYVVDGHDVE----ELCKAMWHAEGVKGKP 237 Query: 275 IIIEMLTYRYRG-HSMSDPANY--------RTREEINEMRSN 307 I T++ +G + D N+ R E IN++ S Sbjct: 238 TAIVAKTFKGKGLKGIEDQDNWHGKPMPKDRAEELINDLLSQ 279 >gi|255038849|ref|YP_003089470.1| Transketolase domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254951605|gb|ACT96305.1| Transketolase domain protein [Dyadobacter fermentans DSM 18053] Length = 275 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 14/169 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI-- 215 G +G + + TGIA A K DG N+G +E+ + A L+ +++I Sbjct: 110 GSLGHGLPIATGIAHAAKVGGDAAYSFTLLSDGETNEGTTWEAAHYAIQNQLDNLFMIID 169 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +N GT+ + +T ++ + ++VDG DI A+ A A+ + HK + Sbjct: 170 KNGLQGFGTT-DKVLGETASVEKWNAIGFETVEVDGHDIAAISA----AITGLKKHKNGL 224 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ----VRKRLLH 320 ++ +G +S N + E + + N D EQ V++R L+ Sbjct: 225 PKAIIANTVKGKGVSYMEN---KLEWHYLPMNKDQYEQAALEVKERYLN 270 >gi|77920530|ref|YP_358345.1| 2-oxoglutarate dehydrogenase E1 component [Pelobacter carbinolicus DSM 2380] gi|77546613|gb|ABA90175.1| 2-oxoglutarate dehydrogenase E1 component [Pelobacter carbinolicus DSM 2380] Length = 907 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 9/154 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A + QG V E+ N++ L ++++ NNQ T A + + Sbjct: 323 LPILIHGDAAFSGQGIVPETLNLSQLEGFGTGGTLHIVLNNQIGFTTVPEDARSTPYATD 382 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 IP V G + A ++ A+ Y + +++E++ YR GH+ D Y T Sbjct: 383 VAKMLTIPIFHVHGENPEAAIHAVELALEYRQRFGRDVLLEIICYRRHGHNEGD-EPYFT 441 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 + + + P+ ++ + N+ EG KE Sbjct: 442 QPLMYQAIKQRPPVHEIYQ----NQLLEEGLDKE 471 >gi|186288308|ref|NP_932336.3| transketolase-like protein 2 [Danio rerio] gi|34193898|gb|AAH56536.1| Tkt protein [Danio rerio] gi|37682085|gb|AAQ97969.1| transketolase [Danio rerio] gi|220675885|emb|CAX12743.1| transketolase [Danio rerio] Length = 625 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 16/162 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+ + L N++ ++ Sbjct: 122 GSLGQGLGAACGMAYTGKYLDKSSYRVYCMLGDGECSEGSVWEAMAFASHYKLDNLVAIL 181 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 + N+ + +R +F VDG D+ + KA+ + KG P Sbjct: 182 DVNRLGQSEPAPLQHNVNVYKERCEAFGFNTYVVDGHDVE----ELCKAMWHAEGVKGKP 237 Query: 275 IIIEMLTYRYRG-HSMSDPANY--------RTREEINEMRSN 307 I T++ +G + D N+ R E IN++ S Sbjct: 238 TAIVAKTFKGKGLKGIEDQDNWHGKPMPKDRAEELINDLLSQ 279 >gi|91788486|ref|YP_549438.1| 2-oxoglutarate dehydrogenase E1 component [Polaromonas sp. JS666] gi|91697711|gb|ABE44540.1| 2-oxoglutarate dehydrogenase E1 component [Polaromonas sp. JS666] Length = 963 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 10/125 (8%) Query: 177 RRSDK-----ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVS 227 RR+D + V+ GD A A QG V E+ +A + ++++ NNQ TS Sbjct: 355 RRADPKGLQVLPVLVHGDAAFAGQGVVMETLALAETRGYFTGGTVHIVINNQIGFTTSDP 414 Query: 228 RASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S T + V P + V+G D AV A+ + + ++++++ +R G Sbjct: 415 RDSRSTLYCTDVVKMIEAPVLHVNGDDPEAVVLATQLALEFRMEFQKDVVVDIICFRKLG 474 Query: 287 HSMSD 291 H+ D Sbjct: 475 HNEQD 479 >gi|77747814|ref|NP_636859.2| 2-oxoglutarate dehydrogenase E1 component [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|77761249|ref|YP_243818.2| 2-oxoglutarate dehydrogenase E1 component [Xanthomonas campestris pv. campestris str. 8004] Length = 942 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ V ++++ NNQ TS +R A++ Sbjct: 348 RKTVLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVVNNQIGFTTS-ARDDARS 406 Query: 234 NFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 407 TLYCTDVAKMIGAPVFHVNGDDPDAVMFVSKLAYEFRQQFKKDVVIDLVCYRRWGHNEAD 466 Query: 292 ------PANYRT 297 P Y+T Sbjct: 467 EPAATQPVMYQT 478 >gi|157375949|ref|YP_001474549.1| alpha-ketoglutarate decarboxylase [Shewanella sediminis HAW-EB3] gi|157318323|gb|ABV37421.1| Oxoglutarate dehydrogenase (succinyl-transferring) [Shewanella sediminis HAW-EB3] Length = 940 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+FN++ V I ++ NNQ T+++ T + + Sbjct: 358 LPITIHGDSAITGQGIVQETFNMSQTRGFKVGGSIRIVINNQVGFTTNLTEDVRSTEYCT 417 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV AV Y K ++I+++ YR GH+ +D Sbjct: 418 DIAKMVQAPIFHVNADDPEAVAFISQLAVDYRNEFKRDVVIDLVCYRRHGHNEAD 472 >gi|308812384|ref|XP_003083499.1| Predicted 2-oxoglutarate dehydrogenase, E1 subunit (ISS) [Ostreococcus tauri] gi|116055380|emb|CAL58048.1| Predicted 2-oxoglutarate dehydrogenase, E1 subunit (ISS) [Ostreococcus tauri] Length = 1210 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 15/141 (10%) Query: 168 TGIAFANKYRRSDK----------ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IY 213 +G+ A ++RR + + ++ GD + GQ E + L + + ++ Sbjct: 352 SGVVRAKQFRRDPEAQGAGARAHVLPLLLHGDASFCGLGQTAEVMTLQDLPDYSTGGTVH 411 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 VI NNQ T RA + + S ++ P + V+G D AV M A Y + Sbjct: 412 VIVNNQIGFTTVPRRARSSPHPSDVAKAYGAPIIHVNGDDPDAVIRAMRLAADYRAEFQS 471 Query: 274 PIIIEMLTYRYRGHS-MSDPA 293 +++ + YR GH+ + DP+ Sbjct: 472 DVVVNYVCYRRFGHNELDDPS 492 >gi|284006402|emb|CBA71638.1| 1-deoxy-D-xylulose-5-phosphate synthase [Arsenophonus nasoniae] Length = 602 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + K G +H F S + GH +S G G+A A +Y D+ Sbjct: 69 LTGRRDRIGTIRQKNG-LHPFPWRAESEYDVLSVGHS--STSISAGLGMAVAAEYENKDR 125 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 126 KTVCVIGDGAITAGMAFEAMNHAGDIHKDILVILNDNEMSISENV 170 >gi|83719912|ref|YP_443073.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia thailandensis E264] gi|167582078|ref|ZP_02374952.1| alpha-ketoglutarate decarboxylase [Burkholderia thailandensis TXDOH] gi|167620239|ref|ZP_02388870.1| alpha-ketoglutarate decarboxylase [Burkholderia thailandensis Bt4] gi|257139303|ref|ZP_05587565.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia thailandensis E264] gi|83653737|gb|ABC37800.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia thailandensis E264] Length = 954 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDADGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLATQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|157109931|ref|XP_001650884.1| 2-oxoglutarate dehydrogenase [Aedes aegypti] gi|108878859|gb|EAT43084.1| 2-oxoglutarate dehydrogenase [Aedes aegypti] Length = 904 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 43/191 (22%), Positives = 77/191 (40%), Gaps = 4/191 (2%) Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENN 218 Q+SL G N S + + GD A QG E +A + + +V I++I NN Sbjct: 293 QLSLQDGPYQLNPSNSSKVVNIQLHGDAAFVGQGINQECLMMADVPHFDVGGSIHMIVNN 352 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 Q T R S S P V+G D A+ A AY + + I+ Sbjct: 353 QVGFTTPGERGRGTRYASDLAKSIMAPVFHVNGDDPEALTKITKLAFAYQQKFGKDVFID 412 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 + +R GH+ D + + N + + + K+LL + ++ D+ + + + Sbjct: 413 LNCFRRWGHNELDDPTFTSPLLYNVIHNRSSVPDLYAKKLLESGDLTQSDIDTVVKSHHE 472 Query: 339 IINNSVEFAQS 349 +N+ ++ S Sbjct: 473 FLNSELQSVNS 483 >gi|91776485|ref|YP_546241.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacillus flagellatus KT] gi|118595589|sp|Q1GZD7|DXS_METFK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|91710472|gb|ABE50400.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacillus flagellatus KT] Length = 614 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 8/110 (7%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 R GGI+ ++ T F GH +S G+A A + SD+ + GDGA Sbjct: 94 RPGGIAGFPRRDESIYDT---FGTGHS--STSISAALGMAVAAQKTGSDRHSIAVIGDGA 148 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 G +E+ N A + N++ ++ +N ++ +V A TN+ + +S Sbjct: 149 MTAGMAFEALNNAGAMDANILVILNDNDMSISPNV---GALTNYLAKLLS 195 >gi|54308241|ref|YP_129261.1| 2-oxoglutarate dehydrogenase E1 component [Photobacterium profundum SS9] gi|46912669|emb|CAG19459.1| putative 2-oxoglutarate dehydrogenase, E1 component [Photobacterium profundum SS9] Length = 937 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 11/162 (6%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQ 196 GG +H+ F H + V +G+ A ++ SD + + GD A A QG Sbjct: 312 GGDVHL---ALAFNPSHLEIVNPVVVGSVRARQDRLGDSDGSKVLPITLHGDSAIAGQGV 368 Query: 197 VYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGM 252 V E+FN++ V I ++ NNQ TS + T + + P V+ Sbjct: 369 VAETFNMSQARGYRVGGTIRIVVNNQIGFTTSNPQDMRSTEYCTDIAKMVQAPIFHVNAD 428 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 D AV A + K ++I+++ YR GH+ +D N Sbjct: 429 DPEAVAFVTRIAFDFRNTFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|67971086|dbj|BAE01885.1| unnamed protein product [Macaca fascicularis] Length = 623 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|91782997|ref|YP_558203.1| alpha-ketoglutarate decarboxylase [Burkholderia xenovorans LB400] gi|91686951|gb|ABE30151.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia xenovorans LB400] Length = 953 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 16/145 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 338 GSAKARMDRRGDDSGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P + V+G D AV A+ + ++++ Sbjct: 398 IGFTTSDPRDSRSTLYCSDVVKMIEAPVLHVNGDDPEAVVLATQLAIDFRMQFHKDVVVD 457 Query: 279 MLTYRYRGHSMSD------PANYRT 297 ++ +R GH+ D P Y+T Sbjct: 458 IVCFRKLGHNEQDTPAVTQPLMYKT 482 >gi|221633258|ref|YP_002522483.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermomicrobium roseum DSM 5159] gi|254782085|sp|B9L1L6|DXS_THERP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|221156054|gb|ACM05181.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermomicrobium roseum DSM 5159] Length = 629 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G+A A K R + GDGA G YE+ N A Sbjct: 106 SPHDHFGAGHA--STSISAALGMAVAAKLRGDRYHTIAVIGDGALTGGMAYEALNHAGAL 163 Query: 208 NLNVIYVIENNQYAMGTSV 226 + +I V+ +N+ ++ +V Sbjct: 164 QVPLIVVLNDNEMSIAPNV 182 >gi|187923632|ref|YP_001895274.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia phytofirmans PsJN] gi|187714826|gb|ACD16050.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia phytofirmans PsJN] Length = 953 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 16/145 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 338 GSAKARMDRRGDDSGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P + V+G D AV A+ + ++++ Sbjct: 398 IGFTTSDPRDSRSTLYCSDVVKMIEAPVLHVNGDDPEAVVLATQLAIDFRMQFHKDVVVD 457 Query: 279 MLTYRYRGHSMSD------PANYRT 297 ++ +R GH+ D P Y+T Sbjct: 458 IVCFRKLGHNEQDTPAVTQPLMYKT 482 >gi|47229686|emb|CAG06882.1| unnamed protein product [Tetraodon nigroviridis] Length = 665 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 2/99 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C GDG ++G V+E+ + A+ + L N++ ++ Sbjct: 123 GSIGQGLGVACGMAYTGKYFDRSSYRVYCLMGDGEMSEGAVWEAMSFASYYQLDNLVAIM 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + N+ S + KR +F + VDG + Sbjct: 183 DINRLGQCDSAPLQHHVEKYQKRCEAFGWHAIVVDGHSV 221 >gi|53719523|ref|YP_108509.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia pseudomallei K96243] gi|76809454|ref|YP_333323.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia pseudomallei 1710b] gi|126440845|ref|YP_001058789.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia pseudomallei 668] gi|126453274|ref|YP_001066041.1| alpha-ketoglutarate decarboxylase [Burkholderia pseudomallei 1106a] gi|134282340|ref|ZP_01769045.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei 305] gi|167719807|ref|ZP_02403043.1| alpha-ketoglutarate decarboxylase [Burkholderia pseudomallei DM98] gi|167738808|ref|ZP_02411582.1| alpha-ketoglutarate decarboxylase [Burkholderia pseudomallei 14] gi|167816031|ref|ZP_02447711.1| alpha-ketoglutarate decarboxylase [Burkholderia pseudomallei 91] gi|167824406|ref|ZP_02455877.1| alpha-ketoglutarate decarboxylase [Burkholderia pseudomallei 9] gi|167845938|ref|ZP_02471446.1| alpha-ketoglutarate decarboxylase [Burkholderia pseudomallei B7210] gi|167894515|ref|ZP_02481917.1| alpha-ketoglutarate decarboxylase [Burkholderia pseudomallei 7894] gi|167902917|ref|ZP_02490122.1| alpha-ketoglutarate decarboxylase [Burkholderia pseudomallei NCTC 13177] gi|167911156|ref|ZP_02498247.1| alpha-ketoglutarate decarboxylase [Burkholderia pseudomallei 112] gi|167919179|ref|ZP_02506270.1| alpha-ketoglutarate decarboxylase [Burkholderia pseudomallei BCC215] gi|217423370|ref|ZP_03454871.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei 576] gi|237812051|ref|YP_002896502.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Burkholderia pseudomallei MSHR346] gi|242315485|ref|ZP_04814501.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Burkholderia pseudomallei 1106b] gi|254197805|ref|ZP_04904227.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei S13] gi|254260360|ref|ZP_04951414.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Burkholderia pseudomallei 1710a] gi|52209937|emb|CAH35909.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia pseudomallei K96243] gi|76578907|gb|ABA48382.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei 1710b] gi|126220338|gb|ABN83844.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Burkholderia pseudomallei 668] gi|126226916|gb|ABN90456.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei 1106a] gi|134246378|gb|EBA46467.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei 305] gi|169654546|gb|EDS87239.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei S13] gi|217393228|gb|EEC33249.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei 576] gi|237503906|gb|ACQ96224.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Burkholderia pseudomallei MSHR346] gi|242138724|gb|EES25126.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Burkholderia pseudomallei 1106b] gi|254219049|gb|EET08433.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Burkholderia pseudomallei 1710a] Length = 954 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDADGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLATQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|168237363|ref|ZP_02662421.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735363|ref|YP_002115411.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710865|gb|ACF90086.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197289610|gb|EDY28973.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 276 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 5/107 (4%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKI-CVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K RR +++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLARRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 I+ N+ + + + + +F+ + V G DI + A + Sbjct: 173 IDWNKQQLDGELEEIINPFDLEGKFRAFDFDVVTVKGDDIAGLLAVV 219 >gi|168229715|ref|ZP_02654773.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470545|ref|ZP_03076529.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194456909|gb|EDX45748.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205335924|gb|EDZ22688.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 276 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 16/165 (9%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKI-CVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K RR +++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLARRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIR---AVKATMDKAVAYCRA- 270 I+ N+ + + + + +F + V G DI AV + A A R Sbjct: 173 IDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAVVQPVPPADAQPRVV 232 Query: 271 ------HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHD 309 +G + +E LT + ++D E I+++ HD Sbjct: 233 ILDSIKGQGVLCLEQLTNSHH-LRLTDGMKQTLNEAIHQLEVMHD 276 >gi|113969975|ref|YP_733768.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella sp. MR-4] gi|113884659|gb|ABI38711.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella sp. MR-4] Length = 939 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 11/116 (9%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS----VSRASAQTNF 235 + GD A A QG V E+FN++ V I ++ NNQ TS V T+ Sbjct: 359 ITIHGDSAIAGQGIVQETFNMSQTRGFKVGGSIRIVVNNQVGFTTSNHFDVRSTEYCTDI 418 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +K P V+ D AV AV Y K ++I+++ YR GH+ +D Sbjct: 419 AKM---VQAPIFHVNSDDPEAVAFVAQLAVDYRNEFKRDVVIDLVCYRRHGHNEAD 471 >gi|226199718|ref|ZP_03795271.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei Pakistan 9] gi|254179973|ref|ZP_04886572.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei 1655] gi|254188617|ref|ZP_04895128.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei Pasteur 52237] gi|254297808|ref|ZP_04965261.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei 406e] gi|157807361|gb|EDO84531.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei 406e] gi|157936296|gb|EDO91966.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei Pasteur 52237] gi|184210513|gb|EDU07556.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei 1655] gi|225928304|gb|EEH24338.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia pseudomallei Pakistan 9] Length = 950 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 335 GSAKARMDRRGDADGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 394 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV A+ Y ++I+ Sbjct: 395 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLATQIAIDYRMQFHKDVVID 454 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 455 IVCFRKLGHNEQDTPA 470 >gi|325919392|ref|ZP_08181419.1| 2-oxoglutarate dehydrogenase E1 component [Xanthomonas gardneri ATCC 19865] gi|325550107|gb|EGD20934.1| 2-oxoglutarate dehydrogenase E1 component [Xanthomonas gardneri ATCC 19865] Length = 942 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ V ++++ NNQ TS +R A++ Sbjct: 348 RKTVLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVINNQIGFTTS-ARDDARS 406 Query: 234 NFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 407 TLYCTDVAKMIGAPVFHVNGDDPDAVMFVSKLAYEFRQQFKKDVVIDLVCYRRWGHNEAD 466 Query: 292 ------PANYRT 297 P Y+T Sbjct: 467 EPAATQPVMYQT 478 >gi|237737538|ref|ZP_04568019.1| transketolase subunit A [Fusobacterium mortiferum ATCC 9817] gi|229419418|gb|EEO34465.1| transketolase subunit A [Fusobacterium mortiferum ATCC 9817] Length = 273 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 21/161 (13%) Query: 165 SLGTGIAFANKYRRSDKI------CVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIEN 217 SLG G++ AN + KI + GDG +GQV+E+ AA + L NV ++ Sbjct: 117 SLGQGLSVANGMALNAKISGLSYRTYIILGDGELQEGQVWEAAMTAAHYKLDNVCAFLDF 176 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PII 276 N + +V + + +F +++DG + + +DKA + KG P I Sbjct: 177 NNLQIDGNVDKVMGVEPVDAKWEAFGWNVIKIDGHNFEEILNALDKA----KTVKGKPTI 232 Query: 277 IEMLTYRYRGHSMSD---------PANYRTREEINEMRSNH 308 I T + +G S + P T + + E+ N+ Sbjct: 233 IIAKTVKGKGVSFMENVCGFHGVAPTKEETEKALAELGGNN 273 >gi|167836813|ref|ZP_02463696.1| alpha-ketoglutarate decarboxylase [Burkholderia thailandensis MSMB43] Length = 954 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDADGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLATQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|168038235|ref|XP_001771607.1| predicted protein [Physcomitrella patens subsp. patens] gi|162677163|gb|EDQ63637.1| predicted protein [Physcomitrella patens subsp. patens] Length = 679 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH +G G G G +S G G+A + Sbjct: 110 ILTGRRDRMHTLRQTDGLSGFVKRAESEYDAFGAGHSSTSISAGLGMAVGRDLKGKKNNV 169 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA GQ YE+ N A + N+I ++ +N+ Sbjct: 170 IAVIGDGAMTAGQAYEAMNNAGYLDCNMIVILNDNK 205 >gi|21673791|ref|NP_661856.1| transketolase, N-terminal subunit [Chlorobium tepidum TLS] gi|21646920|gb|AAM72198.1| transketolase, N-terminal subunit [Chlorobium tepidum TLS] Length = 303 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 15/152 (9%) Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQ 219 G ++G + ++ + C++ GDG +GQ++E+ AA + L N+I +++ N Sbjct: 141 GLSAAVGAALGLRMDGKKGEVFCLM--GDGECQEGQIWEAAMSAAHYQLGNLIGIVDYNN 198 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG---PII 276 + VS F+ + +F + DG DI T++ Y R G P++ Sbjct: 199 QQIDGEVSEVMDIEPFADKWRAFGWDVLSCDGNDIEHFIDTLE----YLRKDTGRTKPVV 254 Query: 277 IEMLTYRYRG-----HSMSDPANYRTREEINE 303 + T +G +M D +N+ + E Sbjct: 255 VLAKTVMGKGVPFFEGTMPDKSNWHGKPPSKE 286 >gi|325292127|ref|YP_004277991.1| Deoxyxylulose-5-phosphate synthase [Agrobacterium sp. H13-3] gi|325059980|gb|ADY63671.1| Deoxyxylulose-5-phosphate synthase [Agrobacterium sp. H13-3] Length = 636 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 5/100 (5%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 ++GG+S G + S + F GH +S G G+A A +SD+ + GDG+ Sbjct: 96 QEGGLS---GFTRRAESEYDDFGAGHS--STSISAGLGMAVAAGLDQSDRKVIAVIGDGS 150 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + G +E+ N A + +I ++ +N ++ SA Sbjct: 151 MSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSA 190 >gi|254509025|ref|ZP_05121130.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Vibrio parahaemolyticus 16] gi|219548060|gb|EED25080.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Vibrio parahaemolyticus 16] Length = 941 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS + T Sbjct: 350 STVLPITIHGDSAIAGQGVVQETFNMSQARGFCVGGTVRIVVNNQVGFTTSNPNDTRSTM 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A+ Y K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|167627944|ref|YP_001678444.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189027775|sp|B0U0B3|DXS_FRAP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|167597945|gb|ABZ87943.1| 1-deoxyxylulose-5-phosphate synthase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 618 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 52/216 (24%) Query: 129 LTGRQGG-ISKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I+ K G + F + + F GH +LG IA + + S I Sbjct: 84 LTGRKDKLITIKKDGGISGFPKRSESEYDTFGVGHSSTSISAALGMAIADRLQGKHSSSI 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK----- 237 V+ GDGA G +E+ N A +++ ++ +N+ ++ +V SA FSK Sbjct: 144 AVI--GDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAH--FSKIISGG 199 Query: 238 ---------RGVSFNIPGM---------QVDGMDIRA---------VKATMD-------- 262 + V NIP M Q GM + A +D Sbjct: 200 FYNSIREKGKEVLKNIPPMFEFVKKIETQTKGMFVPANFFEDLGFYYVGPIDGHNVVELV 259 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYR 296 K + + HKGP ++ ++T + +G++ SDP + Sbjct: 260 KTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFH 295 >gi|167624411|ref|YP_001674705.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella halifaxensis HAW-EB4] gi|167354433|gb|ABZ77046.1| 2-oxoglutarate dehydrogenase, E1 subunit [Shewanella halifaxensis HAW-EB4] Length = 940 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 5/113 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKR 238 + GD A QG V E+FN++ V I ++ NNQ T+++ T + + Sbjct: 360 ITIHGDSAITGQGIVQETFNMSQTRAFKVGGSIRIVVNNQVGFTTNLTEDVRSTEYCTDI 419 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV AV Y K ++I+++ YR GH+ +D Sbjct: 420 AKMVQAPIFHVNADDPEAVAFVSQLAVDYRNEFKRDVVIDLVCYRRHGHNEAD 472 >gi|53724834|ref|YP_102751.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia mallei ATCC 23344] gi|121598805|ref|YP_992828.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia mallei SAVP1] gi|124384081|ref|YP_001026171.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia mallei NCTC 10229] gi|126450583|ref|YP_001080559.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia mallei NCTC 10247] gi|167001007|ref|ZP_02266808.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia mallei PRL-20] gi|238563860|ref|ZP_00438154.2| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Burkholderia mallei GB8 horse 4] gi|254177737|ref|ZP_04884392.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia mallei ATCC 10399] gi|254199700|ref|ZP_04906066.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia mallei FMH] gi|254206023|ref|ZP_04912375.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia mallei JHU] gi|254358395|ref|ZP_04974668.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia mallei 2002721280] gi|52428257|gb|AAU48850.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia mallei ATCC 23344] gi|121227615|gb|ABM50133.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia mallei SAVP1] gi|124292101|gb|ABN01370.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia mallei NCTC 10229] gi|126243453|gb|ABO06546.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia mallei NCTC 10247] gi|147749296|gb|EDK56370.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia mallei FMH] gi|147753466|gb|EDK60531.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia mallei JHU] gi|148027522|gb|EDK85543.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia mallei 2002721280] gi|160698776|gb|EDP88746.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia mallei ATCC 10399] gi|238519813|gb|EEP83279.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Burkholderia mallei GB8 horse 4] gi|243063185|gb|EES45371.1| 2-oxoglutarate dehydrogenase, E1 component [Burkholderia mallei PRL-20] Length = 954 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 339 GSAKARMDRRGDADGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 398 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV A+ Y ++I+ Sbjct: 399 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVLATQIAIDYRMQFHKDVVID 458 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 459 IVCFRKLGHNEQDTPA 474 >gi|261837795|gb|ACX97561.1| transketolase A [Helicobacter pylori 51] Length = 641 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A +NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLC-GDGDLQEGISYESASLAGHFNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + VI ++NQ ++ +++ S R ++ N ++ DG D +A+ ++KA Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEKA 233 >gi|255546609|ref|XP_002514364.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis] gi|223546820|gb|EEF48318.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis] Length = 717 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 79/197 (40%), Gaps = 52/197 (26%) Query: 136 ISKGKGGSMHMFSTKNGFYG--------------GHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH KNG G GHG VS G G+A A + + Sbjct: 154 ILTGRRSLMHTLRQKNGLSGFTSQSESEYDPFGAGHGC--NSVSAGLGMAVARDMKGKRE 211 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY---------------AMGTSV 226 V +G GQVYE+ + A + N+I ++ ++++ A+ +++ Sbjct: 212 RVVTVISNGTTMAGQVYEAMSNAGYIDSNMIVILNDSRHSLHPKIEEGPKTSLNALSSTL 271 Query: 227 SRASAQTNFSK-----RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI---IIE 278 SR + +F K +GV+ I G + + A +D+ Y R GP+ + E Sbjct: 272 SRLQSSKSFRKFREAAKGVTKRI------GRGMHELAAKVDE---YARGMIGPLGSTLFE 322 Query: 279 MLTYRY----RGHSMSD 291 L Y GH++ D Sbjct: 323 ELGLYYIGPVDGHNIED 339 >gi|114047210|ref|YP_737760.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella sp. MR-7] gi|113888652|gb|ABI42703.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella sp. MR-7] Length = 939 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 11/116 (9%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS----VSRASAQTNF 235 + GD A A QG V E+FN++ V I ++ NNQ TS V T+ Sbjct: 359 ITIHGDSAIAGQGIVQETFNMSQTRGFKVGGSIRIVVNNQVGFTTSNHFDVRSTEYCTDI 418 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +K P V+ D AV AV Y K ++I+++ YR GH+ +D Sbjct: 419 AKM---VQAPIFHVNSDDPEAVAFVAQLAVDYRNEFKRDVVIDLVCYRRHGHNEAD 471 >gi|297293632|ref|XP_001095403.2| PREDICTED: transketolase-like protein 2-like isoform 1 [Macaca mulatta] Length = 625 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+F A+ +NL N++ V Sbjct: 123 GSLGQGLGAACGMAYTGKYLDKASYRVFCLMGDGESSEGSVWEAFAFASHYNLDNLVAVF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + +F VDG D+ A+ +A + P Sbjct: 183 DVNRLGQSGPAPLEHGADIYQNCCEAFGWNTYLVDGHDVEALCQVFWQA---SQVKNKPT 239 Query: 276 IIEMLTYRYRG-HSMSDPANY 295 I T++ RG ++ D N+ Sbjct: 240 AIVAKTFKGRGIPNIEDAENW 260 >gi|323525733|ref|YP_004227886.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia sp. CCGE1001] gi|323382735|gb|ADX54826.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia sp. CCGE1001] Length = 953 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 16/145 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 338 GSAKARMDRRGDDSGTQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P + V+G D AV A+ + ++++ Sbjct: 398 IGFTTSDPRDSRSTLYCSDVVKMIEAPVLHVNGDDPEAVVLATQLAIDFRMQFHKDVVVD 457 Query: 279 MLTYRYRGHSMSD------PANYRT 297 ++ +R GH+ D P Y+T Sbjct: 458 IVCFRKLGHNEQDTPAVTQPLMYKT 482 >gi|82701986|ref|YP_411552.1| alpha-ketoglutarate decarboxylase [Nitrosospira multiformis ATCC 25196] gi|82410051|gb|ABB74160.1| 2-oxoglutarate dehydrogenase E1 component [Nitrosospira multiformis ATCC 25196] Length = 935 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A ++R D+ + V+ GD A + QG V E+ N++ +++I NNQ Sbjct: 326 GSVRARQHRLQDRDGDLVLPVLLHGDAAYSAQGVVMETLNLSQTRGYGTGGTVHIIINNQ 385 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + + P V+G D AV + A+ + ++++ Sbjct: 386 IGFTTSDPRDARSTLYCTDVSKMIEAPIFHVNGDDPEAVVMVTEIALDFRMQFHKDVVVD 445 Query: 279 MLTYRYRGHSMSD 291 M+ YR GH+ D Sbjct: 446 MVCYRTLGHNEQD 458 >gi|325496666|gb|EGC94525.1| carbohydrate degradation enzyme [Escherichia fergusonii ECD227] Length = 276 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 12/153 (7%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K R++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLAGRKNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ++ N+ + + + + +F + V+G DI + + K V A P Sbjct: 173 VDWNKQQLDGQLDEIINPFDLESKFRAFGFDVVTVNGDDIEGLLNVV-KPVPPAEAR--P 229 Query: 275 IIIEMLTYRYRG----HSMSDPANYRTREEINE 303 ++ + + + +G +S+ + R EE+ E Sbjct: 230 RVVILDSIKGQGVPCLEQLSNSHHLRLTEEMKE 262 >gi|170694411|ref|ZP_02885564.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia graminis C4D1M] gi|170140545|gb|EDT08720.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia graminis C4D1M] Length = 953 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 16/145 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 338 GSAKARMDRRGDDSGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P + V+G D AV A+ + ++++ Sbjct: 398 IGFTTSDPRDSRSTLYCSDVVKMIEAPVLHVNGDDPEAVVLATQLAIDFRMQFHKDVVVD 457 Query: 279 MLTYRYRGHSMSD------PANYRT 297 ++ +R GH+ D P Y+T Sbjct: 458 IVCFRKLGHNEQDTPAVTQPLMYKT 482 >gi|35187002|gb|AAQ84169.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pueraria montana var. lobata] Length = 717 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH NG G G G +S G G+A + Sbjct: 150 ILTGRRDKMHTMRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRKNNV 209 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 210 VAVIGDGAMTAGQAYEALNNAGYLDSDMIVILNDNK 245 >gi|189017038|gb|ACD70396.1| putative chloroplast 1-deoxy-D-xylulose 5-phosphate synthase [Populus trichocarpa] Length = 685 Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH NG G G G +S G G+A + Sbjct: 117 ILTGRRDKMHTIRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGGTNKV 176 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 177 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 212 >gi|167551767|ref|ZP_02345520.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205323431|gb|EDZ11270.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 620 Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A N++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPNMLVILNDNEMSISENV 189 >gi|302670347|ref|YP_003830307.1| deoxyxylulose-5-phosphate synthase Dxs [Butyrivibrio proteoclasticus B316] gi|302394820|gb|ADL33725.1| deoxyxylulose-5-phosphate synthase Dxs [Butyrivibrio proteoclasticus B316] Length = 617 Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 8/104 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ S + G M F S + F GH +S G G+ A + D Sbjct: 80 LTGRKDKFDSLRQYGGMSGFPKRCESDTDCFDTGHS--STSISAGLGMVKARDLKGEDYT 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDG+ G YE+ N AA N I ++ +N+ ++ SV Sbjct: 138 VVSVIGDGSLTGGLAYEALNNAAKLETNYIIILNDNEMSISESV 181 >gi|301598628|pdb|3MOS|A Chain A, The Structure Of Human Transketolase Length = 616 Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 121 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAIL 180 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 181 DINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 234 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 235 AIIAKTFKGRG 245 >gi|326201230|ref|ZP_08191102.1| Transketolase domain-containing protein [Clostridium papyrosolvens DSM 2782] gi|325988798|gb|EGD49622.1| Transketolase domain-containing protein [Clostridium papyrosolvens DSM 2782] Length = 276 Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust. Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 1/115 (0%) Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL- 209 NG G +G S TG+A A K + GDG + +GQ++E+ +A L Sbjct: 110 NGIDMSTGSLGQGFSASTGMAVAAKMDKKSLYVYSIIGDGESQEGQIWEAAMLAGSRGLD 169 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N+I + N+ + + + ++ +F +DG D++ + +D A Sbjct: 170 NIIAFTDYNKMQIDGLIEEVNGLEPLDRKWEAFGWHVQTIDGHDLKQILYAIDNA 224 >gi|153872363|ref|ZP_02001280.1| Deoxyxylulose-5-phosphate synthase [Beggiatoa sp. PS] gi|152071171|gb|EDN68720.1| Deoxyxylulose-5-phosphate synthase [Beggiatoa sp. PS] Length = 619 Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 35/71 (49%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A AN S++ V GDGA G +E+ N A + N++ ++ Sbjct: 114 GVGHSSTSISAALGMAIANHQLDSNRKVVAIIGDGAMTAGMAFEALNHAGDMDTNILVIL 173 Query: 216 ENNQYAMGTSV 226 +N ++ +V Sbjct: 174 NDNDMSISPNV 184 >gi|187920806|ref|YP_001889838.1| transketolase domain-containing protein [Burkholderia phytofirmans PsJN] gi|187719244|gb|ACD20467.1| Transketolase domain protein [Burkholderia phytofirmans PsJN] Length = 281 Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 3/111 (2%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + SD F DG ++G ++E AA Sbjct: 109 MASYTPGMEMSGGSLGQGLTIAVGRCLGLKRKGSDATVYTLFSDGELDEGAIWEGLMSAA 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 W L N+I +++ NNQ A G S S A ++ +F +VDG D+ Sbjct: 169 HWKLDNLIAMVDVNNQQADGPS-SAVMAFEPLVEKLQAFGWFVQRVDGNDL 218 >gi|289663045|ref|ZP_06484626.1| 2-oxoglutarate dehydrogenase E1 component [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 640 Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ V ++++ NNQ TS +R A++ Sbjct: 348 RKTVLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVINNQIGFTTS-TRDDARS 406 Query: 234 NFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 407 TLYCTDVAKMIGAPVFHVNGDDPDAVMFVSKLAYEFRQQFKKDVVIDLVCYRRWGHNEAD 466 Query: 292 ------PANYRT 297 P Y+T Sbjct: 467 EPAATQPVMYQT 478 >gi|256396666|ref|YP_003118230.1| alpha-ketoglutarate decarboxylase [Catenulispora acidiphila DSM 44928] gi|256362892|gb|ACU76389.1| 2-oxoglutarate dehydrogenase, E1 subunit [Catenulispora acidiphila DSM 44928] Length = 1131 Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 10/134 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N++ L ++++ NNQ TS + + + + Sbjct: 556 LPLLIHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHLVINNQVGFTTSPTSSRSSIYATD 615 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A A Y +A ++I+M+ YR RGH SM+ Sbjct: 616 VARMIEAPIFHVNGDDPEACVRVAKLAFDYRQAFNKDVVIDMICYRRRGHNEGDDPSMTQ 675 Query: 292 PANYRTREEINEMR 305 P Y E +R Sbjct: 676 PLMYNLIEAKRSVR 689 >gi|157877193|ref|XP_001686927.1| 2-oxoglutarate dehydrogenase E1 component [Leishmania major strain Friedlin] gi|68130002|emb|CAJ09310.1| putative 2-oxoglutarate dehydrogenase E1 component [Leishmania major strain Friedlin] Length = 979 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 14/146 (9%) Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNL 209 N F G+ QVSLG + R + + GD A A QG +E+ I+ + Sbjct: 357 NPFVQGY-TRAMQVSLG-------EKGREKVLPIEIHGDAAFAGQGVAFETMCISEVGEQ 408 Query: 210 NV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 + ++V+ NNQ T + + S G +N P + V+G V + A Sbjct: 409 DTGGTVHVVCNNQIGFTTDPKSSRSSAYCSDLGRVYNCPILHVNGDYPEEVIRVFEFAAE 468 Query: 267 Y-CRAHKGPIIIEMLTYRYRGHSMSD 291 Y R HK ++I+++ YR GH+ +D Sbjct: 469 YRARFHKS-VVIDLVCYRRFGHNEND 493 >gi|388891|gb|AAA61222.1| transketolase [Homo sapiens] Length = 623 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|4507521|ref|NP_001055.1| transketolase [Homo sapiens] gi|205277463|ref|NP_001128527.1| transketolase [Homo sapiens] gi|1729976|sp|P29401|TKT_HUMAN RecName: Full=Transketolase; Short=TK gi|1297297|gb|AAA98961.1| transketolase [Homo sapiens] gi|14602962|gb|AAH09970.1| Transketolase [Homo sapiens] gi|119585685|gb|EAW65281.1| transketolase (Wernicke-Korsakoff syndrome), isoform CRA_a [Homo sapiens] gi|119585686|gb|EAW65282.1| transketolase (Wernicke-Korsakoff syndrome), isoform CRA_a [Homo sapiens] gi|123992804|gb|ABM84004.1| transketolase (Wernicke-Korsakoff syndrome) [synthetic construct] gi|157928538|gb|ABW03565.1| transketolase (Wernicke-Korsakoff syndrome) [synthetic construct] gi|158259931|dbj|BAF82143.1| unnamed protein product [Homo sapiens] Length = 623 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|46116934|ref|XP_384485.1| hypothetical protein FG04309.1 [Gibberella zeae PH-1] Length = 1051 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 17/199 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG VYE +L + I+++ NNQ T A + + Sbjct: 426 MSVLLHGDAAFAAQGIVYECLGFHSLPAFSTGGTIHLVVNNQIGFTTDPRFARSTAYCTD 485 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + + P V+ D+ AV A + + ++I++ YR GH+ +D ++ Sbjct: 486 IAKAIDAPVFHVNADDVEAVNFVCQLAADWRAEFQHDVVIDLNCYRKYGHNETDQPSFTQ 545 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV----EFAQSDKE- 352 + + I+ +L+ S+ D++E + V ++ S ++ + KE Sbjct: 546 PLMYKRINAKEPQIDIYVNKLIEEGSFSKADVEEHKQWVWGMLEESFTKSKDYTPTSKEW 605 Query: 353 --------PDPAELYSDIL 363 P EL +++L Sbjct: 606 TTSAWNGFKSPKELATEVL 624 >gi|328784626|ref|XP_396024.4| PREDICTED: probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial-like, partial [Apis mellifera] Length = 893 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 9/175 (5%) Query: 177 RRSDKIC-VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASA 231 R SDK+ + GD A A QG E ++A + + +++I NNQ T SR + Sbjct: 294 RWSDKVLNIQIHGDAAYAAQGVDQECLALSATPHFEIGGTVHLIINNQLGFTTPTSRGRS 353 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MS 290 + + P + V+G D V A Y R + + +++ +R GH+ + Sbjct: 354 SRYCTDLAKMISAPVIHVNGDDPEMVVRAAKIAFKYQRKFRKDVFVDLNCFRRWGHNELD 413 Query: 291 DPANYRTREEINEMRSNHDPI-EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 DP T I ++ N + ++ +L+ N S +K I N +N S+ Sbjct: 414 DPV--FTNPVIYKIIHNRPSVPDKYVNKLIENNVLSTNKVKNIVDNYNSQLNKSL 466 >gi|325291336|ref|YP_004267517.1| transketolase subunit A [Syntrophobotulus glycolicus DSM 8271] gi|324966737|gb|ADY57516.1| transketolase subunit A [Syntrophobotulus glycolicus DSM 8271] Length = 277 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K ++ GDG +G V+E+ AA + L N++ +++ Sbjct: 118 GSLGQGISAACGMALAGKLDQASARVYALLGDGEMAEGLVWEAAMSAAHYKLDNLLAILD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + S + + SF ++ DG D+R + A A RA K P Sbjct: 178 HNGLQIDGPNSEVMNIMPLADKWRSFGWHVIEADGHDVR----QLLDACAEARAVKNKPT 233 Query: 276 IIEMLTYRYRGHS 288 II T + +G S Sbjct: 234 IIIAETIKGKGVS 246 >gi|326790851|ref|YP_004308672.1| deoxyxylulose-5-phosphate synthase [Clostridium lentocellum DSM 5427] gi|326541615|gb|ADZ83474.1| deoxyxylulose-5-phosphate synthase [Clostridium lentocellum DSM 5427] Length = 620 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G + G + S + F GH +S G+A A + D Sbjct: 82 LTGRRKGFRTLRQLDGMSGFPKRVESPHDVFETGHS--STSISAALGMAKARDLKGEDYK 139 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A N N+I V+ +N+ ++ +V Sbjct: 140 VVAVIGDGALTGGMAFEALNNAGRGNTNLIVVLNDNEMSISKNV 183 >gi|302901631|ref|XP_003048478.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256729411|gb|EEU42765.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 1049 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG VYE +L + I+++ NNQ T A + + Sbjct: 424 MSVLLHGDAAFAAQGIVYECLGFHSLPAFSTGGTIHLVVNNQIGFTTDPRFARSTAYCTD 483 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 + + P V+ D+ AV A + + ++I++ YR GH+ +D ++ Sbjct: 484 IAKAIDAPVFHVNADDVEAVNFVCQLAADWRAEFQHDVVIDLNCYRKHGHNETDQPSF 541 >gi|332296799|ref|YP_004438721.1| 1-deoxy-D-xylulose-5-phosphate synthase [Treponema brennaborense DSM 12168] gi|332179902|gb|AEE15590.1| 1-deoxy-D-xylulose-5-phosphate synthase [Treponema brennaborense DSM 12168] Length = 591 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 22/179 (12%) Query: 129 LTGRQGGIS-KGKGGSMHMFS----TKNGFYG-GHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ + K GS+ FS +++ F+ GH VSL +G+A A + Sbjct: 80 LTGRKAAFTDSAKYGSVTGFSNPKESEHDFFTIGH--TSTSVSLASGLAKARDLKNERYN 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS------RASAQTNFS 236 + GDG+ + G+ +E + AA N+I V+ +N+ ++ + R TN + Sbjct: 138 VIAVIGDGSLSGGEAFEGLDYAAENGTNLIVVVNDNEMSIAENHGGLYANLRLLRDTNGA 197 Query: 237 KRGVSFNIPGMQV----DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 F G + DG D+ A+ +AV C P+++ + T + +G + ++ Sbjct: 198 AACNFFKAMGFEYIYVRDGNDVHALIGAF-RAVKDCTR---PVVVHIHTVKGKGFAPAE 252 >gi|255327055|ref|ZP_05368131.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Rothia mucilaginosa ATCC 25296] gi|255296272|gb|EET75613.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Rothia mucilaginosa ATCC 25296] Length = 1217 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 10/135 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ +A L ++V+ NNQ T + T+ S Sbjct: 634 LPILIHGDAAFAGQGIVMETLQMADLKAYTTGGTVHVVVNNQIGFTTLPNDGRTATHASD 693 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+ D AV A Y ++I+++ YR RGH SM+ Sbjct: 694 IARMTKAPVFHVNADDPDAVVRAARLAFEYRERFGRDVVIDLICYRRRGHNEADDPSMTQ 753 Query: 292 PANYRTREEINEMRS 306 P Y+ + + R+ Sbjct: 754 PKMYQDIDVLPSTRT 768 >gi|161502515|ref|YP_001569627.1| hypothetical protein SARI_00559 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863862|gb|ABX20485.1| hypothetical protein SARI_00559 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 276 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 16/165 (9%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKI-CVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K RR +++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLARRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIR---AVKATMDKAVAYCRA- 270 I+ N+ + + + + +F + V G DI AV + A A R Sbjct: 173 IDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAVVQPVPPADAQPRVV 232 Query: 271 ------HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHD 309 +G +E LT + ++D E I+++ HD Sbjct: 233 ILDSIKGQGVPCLEQLTNSHH-LRLTDDMKQTLNEAIHQLEVTHD 276 >gi|159030454|emb|CAO91355.1| dxs [Microcystis aeruginosa PCC 7806] Length = 636 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 13/109 (11%) Query: 139 GKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 G+ H KNG G G G +S G G+A A + D V Sbjct: 82 GRYNDFHTLRQKNGVAGYLKRCESKFDHFGAGHASTSISAGLGMALARDAKGEDFKVVSI 141 Query: 187 FGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVSRASAQTN 234 GDGA G E+ N A L N N++ ++ +N+ ++ +V S N Sbjct: 142 IGDGALTGGMALEAINHAGHLPNTNIMVILNDNEMSISPNVGAISRYLN 190 >gi|62898960|dbj|BAD97334.1| transketolase variant [Homo sapiens] Length = 623 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|57114063|ref|NP_001009097.1| transketolase [Pan troglodytes] gi|62512114|sp|Q5R1W6|TKT_PANTR RecName: Full=Transketolase; Short=TK gi|56342344|dbj|BAD74032.1| transketolase [Pan troglodytes verus] Length = 623 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|312880317|ref|ZP_07740117.1| Transketolase domain protein [Aminomonas paucivorans DSM 12260] gi|310783608|gb|EFQ24006.1| Transketolase domain protein [Aminomonas paucivorans DSM 12260] Length = 648 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 4/122 (3%) Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 H+ G G G +G ++ G G A A + R S+ V GDG +GQV E+ IA Sbjct: 119 HVEREVPGIDWGTGNLGQGLAAGVGFALAARARGSEAWTYVLMGDGEQVKGQVAEARRIA 178 Query: 205 ALWNLNVIYVIE--NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 A LN + V+ N+ GT+ + A + + + +VDG D+ A+ + Sbjct: 179 AKERLNRLTVLVDLNHIQICGTTEAIMPADLVALWKADGWRV--AEVDGHDVGALYVALR 236 Query: 263 KA 264 +A Sbjct: 237 EA 238 >gi|291170708|gb|ADD82535.1| 1-deoxyxylulose-5-phosphate synthase [Narcissus tazetta var. chinensis] Length = 634 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A + GDGA GQ YE+ N A Sbjct: 94 SVHDAFGAGHS--STSISAGLGMAVARDLLGKGNHVISVIGDGAMTAGQAYEAMNNAGYL 151 Query: 208 NLNVIYVIENNQ 219 + N+I V+ +N+ Sbjct: 152 DSNLIVVLNDNK 163 >gi|158288686|ref|XP_310532.4| AGAP000551-PA [Anopheles gambiae str. PEST] gi|157018688|gb|EAA06290.4| AGAP000551-PA [Anopheles gambiae str. PEST] Length = 912 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 5/121 (4%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 RRS + V GD A QG E +AA+ + V +++I NNQ T R + Sbjct: 313 RRSKVLNVQVHGDAAFPGQGINQECLMMAAVPHYEVEGTVHLIVNNQVGFTTPAERGRST 372 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSD 291 S + P + V+G D A+ A+ Y + I++ YR GH+ + D Sbjct: 373 RYVSDLAKAIMAPVVHVNGDDPEALAGVTQLAIEYRQKFGKDFFIDLNCYRRWGHNELDD 432 Query: 292 P 292 P Sbjct: 433 P 433 >gi|220929319|ref|YP_002506228.1| deoxyxylulose-5-phosphate synthase [Clostridium cellulolyticum H10] gi|219999647|gb|ACL76248.1| deoxyxylulose-5-phosphate synthase [Clostridium cellulolyticum H10] Length = 623 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 61/165 (36%), Gaps = 18/165 (10%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S GIA A ++ D + GDGA G YE+ N A Sbjct: 106 SLHDCFNTGHS--STSISAALGIARARDIKKEDYSVMAVIGDGAMTGGMAYEALNDAGRL 163 Query: 208 NLNVIYVIENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 N I V+ +N+ ++ +V R +K + + M G R Sbjct: 164 ASNFIVVLNDNEMSIAQNVGGMSRYLSKLRTDPFYTKTKEDIDNFLDKMPNIGTKTRRAV 223 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINE 303 + V Y + E L YRY G P + +E+N+ Sbjct: 224 RKLKSTVKYLITPG--MFFEQLGYRYYG-----PVDGHNLDELNK 261 >gi|188992180|ref|YP_001904190.1| 2-oxoglutarate dehydrogenase E1 component [Xanthomonas campestris pv. campestris str. B100] gi|21112558|gb|AAM40783.1| oxoglutarate dehydrogenase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574388|gb|AAY49798.1| oxoglutarate dehydrogenase [Xanthomonas campestris pv. campestris str. 8004] gi|167733940|emb|CAP52146.1| oxoglutarate dehydrogenase (succinyl-transferring) [Xanthomonas campestris pv. campestris] Length = 990 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ V ++++ NNQ TS +R A++ Sbjct: 396 RKTVLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVVNNQIGFTTS-ARDDARS 454 Query: 234 NFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 455 TLYCTDVAKMIGAPVFHVNGDDPDAVMFVSKLAYEFRQQFKKDVVIDLVCYRRWGHNEAD 514 Query: 292 ------PANYRT 297 P Y+T Sbjct: 515 EPAATQPVMYQT 526 >gi|37267|emb|CAA47919.1| transketolase [Homo sapiens] Length = 623 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|38013966|gb|AAH24026.2| TKT protein [Homo sapiens] Length = 536 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 36 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAIL 95 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 96 DINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 149 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 150 AIIAKTFKGRG 160 >gi|88802851|ref|ZP_01118378.1| transketolase, N-terminal subunit [Polaribacter irgensii 23-P] gi|88781709|gb|EAR12887.1| transketolase, N-terminal subunit [Polaribacter irgensii 23-P] Length = 281 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 3/126 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A A K DKI GDG +GQ +E+ A+ + N+I ++ Sbjct: 118 GSLGQGLSVGLGVAQAKKLNGDDKIVYTLHGDGELQEGQNWEAIMYASAKKVDNIIATVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD-GMDIRAVKATMDKAVAYCRAHKGPI 275 N + + A + + +F + ++ G DI A+ A + KA K P+ Sbjct: 178 LNGKQIDGATDDVLAMGSIRAKFEAFGWDVLDIEKGNDIEAILAGLAKAKGLTGKGK-PV 236 Query: 276 IIEMLT 281 I + T Sbjct: 237 CILLHT 242 >gi|291544839|emb|CBL17948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruminococcus sp. 18P13] Length = 637 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 23/178 (12%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S+ G+A + + + D V GDGA G VYE N Sbjct: 123 SEHDAFVSGHS--STSISVACGMAASMRLNQQDHYAVAVIGDGAMTGGMVYEGLNNGGKV 180 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRG----------VSFNIPGMQVDGMDIRAV 257 N+I ++ +N ++ +V A A+ S RG V + V G + V Sbjct: 181 PDNLIVILNDNHMSISKNVG-ALAKYLASIRGKEGYVKTKWAVERTLDKTPVLGKPLAKV 239 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEM----RSNHDPI 311 T + H+ + + L + Y G P N EE+ E+ +S H P+ Sbjct: 240 LKTSKDTLRNTLYHQS-TLFDNLGFVYLG-----PVNGHNLEELEEVLQVAKSYHRPV 291 >gi|291531453|emb|CBK97038.1| Transketolase, N-terminal subunit [Eubacterium siraeum 70/3] Length = 280 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 7/142 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K GDG +GQV+E+ AA + L N++ V++ Sbjct: 118 GSLGQGISAACGMALSGKLSNDFYKVYAILGDGEIEEGQVWEAAMFAAHYQLDNLVAVVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + +S + ++ +F + +D D A+ +KA A G P Sbjct: 178 NNGLQIDGRISDVMSPYPIDEKFKAFGWHVISIDAHDFDAI----EKAFAEAEKISGQPT 233 Query: 276 IIEMLTYRYRGHS-MSDPANYR 296 +I + + +G S M D ++ Sbjct: 234 VIIQRSIKGKGVSFMEDQVSWH 255 >gi|188577095|ref|YP_001914024.1| 2-oxoglutarate dehydrogenase E1 component [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521547|gb|ACD59492.1| 2-oxoglutarate dehydrogenase, E1 component [Xanthomonas oryzae pv. oryzae PXO99A] Length = 942 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ V ++++ NNQ TS +R A++ Sbjct: 348 RKTVLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVINNQIGFTTS-TRDDARS 406 Query: 234 NFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 407 TLYCTDVAKMIGAPVFHVNGDDPDAVIFVSKLAYEFRQQFKKDVVIDLVCYRRWGHNEAD 466 Query: 292 ------PANYRT 297 P Y+T Sbjct: 467 EPAATQPVMYQT 478 >gi|308182530|ref|YP_003926657.1| transketolase [Helicobacter pylori PeCan4] gi|308064715|gb|ADO06607.1| transketolase [Helicobacter pylori PeCan4] Length = 641 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 14/129 (10%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKETISHKVYCLC-GDGDLQEGISYESASLAGHLNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 N + VI ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEAK--- 234 Query: 269 RAHKGPIII 277 ++HK ++I Sbjct: 235 KSHKPTLLI 243 >gi|303233217|ref|ZP_07319890.1| transketolase, thiamine diphosphate binding domain protein [Atopobium vaginae PB189-T1-4] gi|302480802|gb|EFL43889.1| transketolase, thiamine diphosphate binding domain protein [Atopobium vaginae PB189-T1-4] Length = 291 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G S GIA + + D + GDG N+GQ +E+F A L+ I I+ Sbjct: 118 GSLGQGTSEAAGIALGLQKKGIDAYTYMFVGDGELNEGQCWEAFQFIAAHKLSKCIVFID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 +N+ + ++ ++ SF +V+G DI A+ Sbjct: 178 DNKRQLDGYTKDVLYPFDYVEKMTSFGFYTQKVNGQDITAL 218 >gi|296158781|ref|ZP_06841610.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia sp. Ch1-1] gi|295890986|gb|EFG70775.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia sp. Ch1-1] Length = 953 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 16/145 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 338 GSAKARMDRRGDDSGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 397 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S T + V P + V+G D AV A+ + ++++ Sbjct: 398 IGFTTSDPRDSRSTLYCSDVVKMIEAPVLHVNGDDPEAVVLATQLAIDFRMQFHKDVVVD 457 Query: 279 MLTYRYRGHSMSD------PANYRT 297 ++ +R GH+ D P Y+T Sbjct: 458 IVCFRKLGHNEQDTPAVTQPLMYKT 482 >gi|226941242|ref|YP_002796316.1| 1-deoxy-D-xylulose-5-phosphate synthase [Laribacter hongkongensis HLHK9] gi|254782077|sp|C1DAW8|DXS_LARHH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|226716169|gb|ACO75307.1| Dxs [Laribacter hongkongensis HLHK9] Length = 622 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 12/103 (11%) Query: 136 ISKGKGGSMHMFSTKNGF----------YGGHGIVGAQVSLGT--GIAFANKYRRSDKIC 183 I G+ MH K G Y G+ + S+G G+A A + SD+ Sbjct: 83 ILTGRRDRMHTMRQKGGLAGFPKRDESEYDTFGVGHSSTSIGAALGMAVAARQTGSDRRV 142 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA GQ +E+ N A + +++ ++ +N ++ +V Sbjct: 143 VAIIGDGAMTAGQAFEALNNAGDSDTDLLVILNDNDMSISPNV 185 >gi|332820565|ref|XP_517516.2| PREDICTED: transketolase-like 2 [Pan troglodytes] Length = 625 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+F A+ +NL N++ V Sbjct: 123 GSLGQGLGAACGMAYTGKYLDKASYRVFCLMGDGESSEGSVWEAFAFASHYNLDNLVAVF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + +F VDG D+ A+ +A + P Sbjct: 183 DVNRLGQSGPAPLEHGADIYQNCCEAFGWNTYLVDGHDVEALCQAFWQA---SQVKNKPT 239 Query: 276 IIEMLTYRYRG-HSMSDPANY 295 I T++ RG ++ D N+ Sbjct: 240 AIVAKTFKGRGIPNIEDAENW 260 >gi|317122004|ref|YP_004102007.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermaerobacter marianensis DSM 12885] gi|315591984|gb|ADU51280.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermaerobacter marianensis DSM 12885] Length = 638 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 37/197 (18%), Positives = 70/197 (35%), Gaps = 44/197 (22%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G G +S G+A A R V GDGA G +E+ N A ++I V+ + Sbjct: 118 GHAGTSISHAVGLARARDLRGEKHHVVAVIGDGALTAGMAFEAMNHAGHLGTDLIVVLND 177 Query: 218 NQYAMGTSV------------------------------SRASAQT-----NFSKRGVSF 242 N ++ +V R Q F Sbjct: 178 NSMSIAPNVGGLSRYLTQIRTDPAYTRMRAELERMLEQLPRVGPQALRWVQRFKDSLKYL 237 Query: 243 NIPGMQVDGMDIRAVKAT-------MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPA 293 +PGM + + +R + + + + +A +GP++I ++T + +G++ + DP Sbjct: 238 VVPGMLFEALGLRYLGPVDGYRLRDLIRVLESAKAMRGPVLIHVITQKGKGYAPAEGDPW 297 Query: 294 NYRTREEINEMRSNHDP 310 + + N +P Sbjct: 298 TWHGPKPFNPATGKMEP 314 >gi|283457772|ref|YP_003362363.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Rothia mucilaginosa DY-18] gi|283133778|dbj|BAI64543.1| 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Rothia mucilaginosa DY-18] Length = 1231 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 10/135 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ +A L ++V+ NNQ T + T+ S Sbjct: 648 LPILIHGDAAFAGQGIVMETLQMADLKAYTTGGTVHVVVNNQIGFTTLPNDGRTATHASD 707 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+ D AV A Y ++I+++ YR RGH SM+ Sbjct: 708 IARMTKAPVFHVNADDPDAVVRAARLAFEYRERFGRDVVIDLICYRRRGHNEADDPSMTQ 767 Query: 292 PANYRTREEINEMRS 306 P Y+ + + R+ Sbjct: 768 PKMYQDIDVLPSTRT 782 >gi|294625477|ref|ZP_06704107.1| Oxoglutarate dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600244|gb|EFF44351.1| Oxoglutarate dehydrogenase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 992 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 14/138 (10%) Query: 172 FANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 F + R+S + ++ GD A A QG V E F ++ V ++ + NNQ TS + Sbjct: 393 FGDAERKS-VLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHTVVNNQIGFTTS-T 450 Query: 228 RASAQTNFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R A++ V+ I P V+G D AV A + + K ++I+++ YR Sbjct: 451 RDDARSTLYCTDVAKMIGAPVFHVNGDDPDAVMFVSKLAYEFRQQFKKDVVIDLVCYRRW 510 Query: 286 GHSMSD------PANYRT 297 GH+ +D P Y+T Sbjct: 511 GHNEADEPAATQPVMYQT 528 >gi|194381830|dbj|BAG64284.1| unnamed protein product [Homo sapiens] Length = 576 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 76 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAIL 135 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 136 DINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 189 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 190 AIIAKTFKGRG 200 >gi|37903541|gb|AAP56243.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens] Length = 639 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 5/100 (5%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 ++GG+S G + S + F GH +S G G+A A SD+ + GDG+ Sbjct: 99 QEGGLS---GFTRRAESEYDDFGAGHS--STSISAGLGMAVAAGLDESDRKVIAVIGDGS 153 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + G +E+ N A + +I ++ +N ++ SA Sbjct: 154 MSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSA 193 >gi|313205862|ref|YP_004045039.1| transketolase domain-containing protein [Riemerella anatipestifer DSM 15868] gi|312445178|gb|ADQ81533.1| Transketolase domain-containing protein [Riemerella anatipestifer DSM 15868] gi|315022743|gb|EFT35767.1| Transketolase, N-terminal section [Riemerella anatipestifer RA-YM] gi|325336701|gb|ADZ12975.1| Transketolase, N-terminal subunit [Riemerella anatipestifer RA-GD] Length = 283 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 3/126 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G A K I GDG +GQ++E+ A+ + N+I I+ Sbjct: 119 GSLGQGLSVAVGAALGKKLDGDKGIVFSLHGDGELQEGQIWEALMYASHNKVDNLIATID 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPI 275 N + VS + N + +F+ ++V +G ++ AV A +++A A K PI Sbjct: 179 YNNRQIDGDVSDVLSLGNLKAKLEAFDWQVLEVKEGNNLEAVIAVLEEAKAQTGKGK-PI 237 Query: 276 IIEMLT 281 I M T Sbjct: 238 AIIMHT 243 >gi|257470073|ref|ZP_05634165.1| transketolase subunit A [Fusobacterium ulcerans ATCC 49185] gi|317064297|ref|ZP_07928782.1| transketolase [Fusobacterium ulcerans ATCC 49185] gi|313689973|gb|EFS26808.1| transketolase [Fusobacterium ulcerans ATCC 49185] Length = 272 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 13/159 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + GDG +GQ++E+ AA + L NV ++ Sbjct: 116 GSLGQGLSVANGMALNAKLSGESYRTYIILGDGELQEGQIWEAAMTAAHYKLDNVCAFLD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + +V + + +F +++DG + + + +DKA A P I Sbjct: 176 FNNLQIDGNVDKIMGVEPVDAKWEAFGWNVIKIDGHNFEEILSALDKAK---EAKGKPTI 232 Query: 277 IEMLTYRYRGHSMSD---------PANYRTREEINEMRS 306 + T + +G S + P T + + E+ S Sbjct: 233 VIAKTVKGKGVSFMENVCGFHGVAPTKEETEKALAELNS 271 >gi|222147754|ref|YP_002548711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium vitis S4] gi|254782057|sp|B9JSL2|DXS_AGRVS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|221734742|gb|ACM35705.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium vitis S4] Length = 639 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 18/68 (26%), Positives = 35/68 (51%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A + ++D+ + GDGA + G +E+ N A + +I ++ +N ++ Sbjct: 126 ISAGLGMAVAAELGQTDRKVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIA 185 Query: 224 TSVSRASA 231 SA Sbjct: 186 PPTGAMSA 193 >gi|220934011|ref|YP_002512910.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thioalkalivibrio sp. HL-EbGR7] gi|254782086|sp|B8GN62|DXS_THISH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|219995321|gb|ACL71923.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 640 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 7/120 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ + + KGG Y G+ +S G+A A + D+ V Sbjct: 87 LTGRREAMPGLRKKGGLAGFPKRAESPYDTFGVGHSSTSISAALGMALAARQLGEDRHAV 146 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 GDGA G +E+ N A N++ V+ +N+ ++ +V A N+ R +S + Sbjct: 147 AIIGDGAMTAGMAFEALNHAGDQKANLLVVLNDNEMSISPNV---GAMNNYLARLLSGKV 203 >gi|288917901|ref|ZP_06412261.1| 2-oxoglutarate dehydrogenase, E1 subunit [Frankia sp. EUN1f] gi|288350690|gb|EFC84907.1| 2-oxoglutarate dehydrogenase, E1 subunit [Frankia sp. EUN1f] Length = 1236 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N++ L ++V+ NNQ TS + + + + Sbjct: 650 LPVLIHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHVVINNQVGFTTSPTSSRSSVYATD 709 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 P V+G D A A AY + ++I+++ YR RGH+ D ++ Sbjct: 710 VARMVQAPIFHVNGDDPEACVRVAALAFAYRQEFNKDVVIDLVCYRRRGHNEMDEPSF 767 >gi|269103075|ref|ZP_06155772.1| 2-oxoglutarate dehydrogenase E1 component [Photobacterium damselae subsp. damselae CIP 102761] gi|268162973|gb|EEZ41469.1| 2-oxoglutarate dehydrogenase E1 component [Photobacterium damselae subsp. damselae CIP 102761] Length = 940 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS + T Sbjct: 350 SKVLPITIHGDSAIAGQGVVAETFNMSQARGYRVGGTVRIVVNNQIGFTTSNPHDTRSTE 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A + K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNADDPEAVAFVTRLAFDFRHEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|84623582|ref|YP_450954.1| alpha-ketoglutarate decarboxylase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|122879155|ref|YP_200683.6| 2-oxoglutarate dehydrogenase E1 component [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367522|dbj|BAE68680.1| oxoglutarate dehydrogenase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 942 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ V ++++ NNQ TS +R A++ Sbjct: 348 RKTVLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVINNQIGFTTS-TRDDARS 406 Query: 234 NFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 407 TLYCTDVAKMIGAPVFHVNGDDPDAVIFVSKLAYEFRQQFKKDVVIDLVCYRRWGHNEAD 466 Query: 292 ------PANYRT 297 P Y+T Sbjct: 467 EPAATQPVMYQT 478 >gi|253583206|ref|ZP_04860404.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fusobacterium varium ATCC 27725] gi|251833778|gb|EES62341.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fusobacterium varium ATCC 27725] Length = 607 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 55/189 (29%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S+ + F GH G +S GIA A+ DK +V GD + + G E+ N Sbjct: 97 SSYDPFISGHA--GTALSAAAGIALAD----PDKKVIVVIGDASISNGHSLEALNNIGAK 150 Query: 208 NLNVIYVIENNQYAMGT---SVSRASAQTNFSKRGVSFN--------------------- 243 N+I ++ +N+ ++G S+SR + S++ +SF Sbjct: 151 LKNLIIILNDNEMSIGKNVGSLSRFFGKLMVSEKYMSFRDDVKAIINKIRIVNRVSNTLE 210 Query: 244 ----------IP-------GMQ----VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 +P G++ +DG DI + T +K + +GPI I + T Sbjct: 211 RMEFSIKNFFLPLSILESLGLKFLGVIDGHDIEELTNTFNK----VKDMEGPIFIHIKTQ 266 Query: 283 RYRGHSMSD 291 + +G+S ++ Sbjct: 267 KGKGYSFAE 275 >gi|210615785|ref|ZP_03290766.1| hypothetical protein CLONEX_02984 [Clostridium nexile DSM 1787] gi|210150121|gb|EEA81130.1| hypothetical protein CLONEX_02984 [Clostridium nexile DSM 1787] Length = 622 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G K G M F + + F GH +S G G A + + D Sbjct: 80 LTGRKAGFDDLRKYGGMSGFPKRKESACDAFDTGHS--STSISAGLGYVEAREILKEDYQ 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + GDG+ G YE+ N A+ N I V+ +N+ ++ +V Sbjct: 138 VISVIGDGSLTGGMAYEALNNASHLKSNFIIVLNDNRMSISENV 181 >gi|317009004|gb|ADU79584.1| transketolase [Helicobacter pylori India7] Length = 641 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 14/129 (10%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKQAISHKVYCLC-GDGDLQEGISYESASLAGHLNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 N + VI ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEAK--- 234 Query: 269 RAHKGPIII 277 ++HK ++I Sbjct: 235 KSHKPTLLI 243 >gi|224437120|ref|ZP_03658101.1| transketolase domain-containing protein [Helicobacter cinaedi CCUG 18818] Length = 271 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 G G +G V L GIA A K ++ D GDG +N+G V+E AA L+ Sbjct: 109 GIEASTGSLGQGVGLAVGIAKAAKIKQQDFHIYTLIGDGESNEGSVWEVAMFAAHNKLDN 168 Query: 212 IYVI--ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 + +I +N+ + G S S + +++ SF Q++G +I + T+ K Sbjct: 169 LTIILDKNSCQSDGFSFSVLD-MGDMARKWESFGFYVEQINGHNIEQIDKTLAK 221 >gi|124267816|ref|YP_001021820.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylibium petroleiphilum PM1] gi|171769840|sp|A2SJ46|DXS_METPP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|124260591|gb|ABM95585.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Methylibium petroleiphilum PM1] Length = 631 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 32/63 (50%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G+A A K + D+ V GDGA G +E+ N A + N++ V+ +N ++ Sbjct: 123 ISAALGMALAAKIKGEDRRSVAIIGDGAMTAGMAFEALNNAGVSGANMLVVLNDNDMSIS 182 Query: 224 TSV 226 V Sbjct: 183 PPV 185 >gi|299533200|ref|ZP_07046584.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni S44] gi|298718730|gb|EFI59703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni S44] Length = 622 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR + + G++ F +GF Y G + S+ G+A A K + Sbjct: 86 LTGR-----RDRMGTLRQFGGLSGFPQRAESEYDTFGTAHSSTSISAALGMALAAKQKGE 140 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ + GDGA G +E+ N + + N++ ++ +N ++ V Sbjct: 141 DRRAIAVIGDGAMTAGMAFEALNNGGVHDANLLVILNDNDMSISPPV 187 >gi|303283128|ref|XP_003060855.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457206|gb|EEH54505.1| predicted protein [Micromonas pusilla CCMP1545] Length = 930 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY--- 267 ++++ NNQ T RA + + S + P V+G D AV AVAY Sbjct: 308 TVHIVVNNQIGFTTVPRRARSSPHPSDVAKGYGAPIFHVNGDDPEAVVRACRLAVAYRAE 367 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSD 291 CRA +++ ++ YR GH+ D Sbjct: 368 CRAD---VVVNLVCYRRYGHNEQD 388 >gi|170760576|ref|YP_001787209.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum A3 str. Loch Maree] gi|169407565|gb|ACA55976.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum A3 str. Loch Maree] Length = 622 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 45/218 (20%), Positives = 81/218 (37%), Gaps = 64/218 (29%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GG+S G S + F GH +S G+A A + Sbjct: 84 LTGRKDKFNTLRQYGGLS---GFPKKCESPYDAFETGHS--STSISAALGMARARDIKGE 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 D + GDGA G +E+ N ++I ++ +NQ ++ +V S+ + + Sbjct: 139 DNKVIAVIGDGALTGGMAFEALNDLGFNKTDLIIILNDNQMSIAENVGGMSSYLSKVRLD 198 Query: 240 VSFN-----------------------------------IPGM-----------QVDGMD 253 ++N +PGM +DG D Sbjct: 199 PTYNKLKKEVNNTLNKIPNVGKGMARSLERVKNGIKQMIVPGMFFENLGIKYLGPIDGHD 258 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 I+ + M A + KGP++I +T + +G++ ++ Sbjct: 259 IKELSKVMKMA----KDIKGPVLIHTITKKGKGYAYAE 292 >gi|167749361|ref|ZP_02421488.1| hypothetical protein EUBSIR_00313 [Eubacterium siraeum DSM 15702] gi|167657642|gb|EDS01772.1| hypothetical protein EUBSIR_00313 [Eubacterium siraeum DSM 15702] Length = 280 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 7/142 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K GDG +GQV+E+ AA + L N++ V++ Sbjct: 118 GSLGQGISAACGMALSGKLSSDFYKVYAILGDGEIEEGQVWEAAMFAAHYQLDNLVAVVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + +S + ++ +F + +D D A+ +KA A G P Sbjct: 178 NNGLQIDGRISDVMSPYPIDEKFKAFGWHVISIDAHDFDAI----EKAFAEAEKISGQPT 233 Query: 276 IIEMLTYRYRGHS-MSDPANYR 296 +I + + +G S M D ++ Sbjct: 234 VIIQRSIKGKGVSFMEDQVSWH 255 >gi|239815162|ref|YP_002944072.1| 2-oxoglutarate dehydrogenase E1 component [Variovorax paradoxus S110] gi|239801739|gb|ACS18806.1| 2-oxoglutarate dehydrogenase, E1 subunit [Variovorax paradoxus S110] Length = 958 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 10/125 (8%) Query: 177 RRSDK-----ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVS 227 RR+D + V+ GD A A QG V E+ +A + ++++ NNQ TS Sbjct: 353 RRADPQGKQVLPVLVHGDAAFAGQGVVMETLALAETRGYFTGGTVHIVINNQIGFTTSDP 412 Query: 228 RASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S T + V P + V+G D AV A+ + + ++++++ +R G Sbjct: 413 RDSRSTLYCSDIVKMIEAPVLHVNGDDPEAVVLATQLALEFRMEFQKDVVVDIICFRKLG 472 Query: 287 HSMSD 291 H+ D Sbjct: 473 HNEQD 477 >gi|256826990|ref|YP_003150949.1| transketolase subunit A [Cryptobacterium curtum DSM 15641] gi|256583133|gb|ACU94267.1| transketolase subunit A [Cryptobacterium curtum DSM 15641] Length = 275 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 1/102 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A + S+ GDG +GQV+E+ AA +L +++ +++ Sbjct: 116 GSLGQGLSIAAGMACGLRLNGSNVHVFCLLGDGECEEGQVWEAAMFAAHEHLGSLVAIVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 N + +V+ S + +F +VDG D++AV+ Sbjct: 176 ANGLQIDGAVNDVVQTGTLSDKFHAFGWDVSEVDGNDVKAVR 217 >gi|332216478|ref|XP_003257378.1| PREDICTED: transketolase [Nomascus leucogenys] Length = 650 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|291006097|ref|ZP_06564070.1| transketolase [Saccharopolyspora erythraea NRRL 2338] Length = 610 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 11/134 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSD----KICVVCFGDGAANQGQVYESFNIAALWNL-NVI 212 G +G + +G G+A K R D ++ V+C GD +G ++E+F AA L N++ Sbjct: 115 GSLGQGLPVGVGLALTGK--RLDQLPYRVWVLC-GDSEMAEGSIWEAFEHAAYSGLDNLV 171 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +++ N+ ++ + + +++DG D+ ++A D+A Sbjct: 172 AIVDVNRLGQTGETMHGWDLDYYAAKAKACGWRTIEIDGHDLEQIEAAYDQATT---PSD 228 Query: 273 GPIIIEMLTYRYRG 286 GP +I T + +G Sbjct: 229 GPTVILARTKKGKG 242 >gi|282852725|ref|ZP_06262067.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus gasseri 224-1] gi|282556467|gb|EFB62087.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus gasseri 224-1] Length = 586 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 20/147 (13%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G V+L TG+A A + + GDG+ G +E FN AA N+I Sbjct: 115 YYAVGHTSTSVALATGMARARDMMGNHENITALIGDGSLTGGLAFEGFNNAADEKHNLII 174 Query: 214 VIENNQYAMGTSV------------SRASAQTN-FSKRGVSFNIPGMQVDGMDIRAVKAT 260 V+ +NQ ++ +V S A+ N F+ G+ + G G DI+ + Sbjct: 175 VVNDNQMSIDDNVGGVVTALKKLRESNGQAEDNPFTAMGLDYKYVGQ---GNDIK----S 227 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGH 287 M A + PI++ + T + +G+ Sbjct: 228 MIDAFKAVKDIDHPIVLHINTLKGKGY 254 >gi|281338020|gb|EFB13604.1| hypothetical protein PANDA_007559 [Ailuropoda melanoleuca] Length = 587 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N+I ++ Sbjct: 87 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLIAIL 146 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 147 DVNRLGQSDPTPLQHQVDVYQKRCEAFGWHTVIVDGHSVEEL------CKAFGQAKHQPT 200 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 201 AIVAKTFKGRG 211 >gi|264679658|ref|YP_003279565.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni CNB-2] gi|262210171|gb|ACY34269.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni CNB-2] Length = 622 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR + + G++ F +GF Y G + S+ G+A A K + Sbjct: 86 LTGR-----RDRMGTLRQFGGLSGFPQRAESEYDTFGTAHSSTSISAALGMALAAKQKGE 140 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ + GDGA G +E+ N + + N++ ++ +N ++ V Sbjct: 141 DRRAIAVIGDGAMTAGMAFEALNNGGVHDANLLVILNDNDMSISPPV 187 >gi|322418644|ref|YP_004197867.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M18] gi|320125031|gb|ADW12591.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M18] Length = 650 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 17/122 (13%) Query: 129 LTGR---------QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR QGGIS G S + F GH +S G G A A ++ Sbjct: 82 LTGRKERFGTLRTQGGIS---GFPKRAESPHDCFDVGHS--STSISAGVGFAVARDLKKE 136 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 + GDGA G +E N A N +++ ++ +N+ ++ +V A +N R Sbjct: 137 RNKVLAVIGDGAMTGGLAFEGLNHAGELNKDLVVILNDNEMSISENV---GALSNLLSRT 193 Query: 240 VS 241 ++ Sbjct: 194 IT 195 >gi|261366141|ref|ZP_05979024.1| transketolase, N-subunit [Subdoligranulum variabile DSM 15176] gi|282572030|gb|EFB77565.1| transketolase, N-subunit [Subdoligranulum variabile DSM 15176] Length = 278 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 11/168 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A + GDG +G V+E AA + L N+ V++ Sbjct: 115 GSLGHGLPVCVGMALAGRMDGRSYRVYTIMGDGELAEGSVWEGAMAAANYGLDNLCAVVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--P 274 N+ + + Q + +R +F + VDG I A MD A + HKG Sbjct: 175 RNRLQISGNTEDVMKQDSQEQRWAAFGWNVISVDGNSIEA----MDAAYTAAKHHKGQPT 230 Query: 275 IIIEMLTYRYRGHSMSDPANYR----TREEINEMRSNHDPIEQVRKRL 318 +II T Y M + A + T EE ++ ++ E+ + + Sbjct: 231 VIITNTTKGYGSPLMENKAGWHHHLPTAEEYEQILADFAKREEAARHV 278 >gi|222111981|ref|YP_002554245.1| hypothetical protein Dtpsy_2811 [Acidovorax ebreus TPSY] gi|221731425|gb|ACM34245.1| thiamine pyrophosphate protein domain protein TPP-binding [Acidovorax ebreus TPSY] Length = 551 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 65/158 (41%), Gaps = 35/158 (22%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 G H T G G G+ A +G IA D+ + GDG A Sbjct: 374 GCPRHDLITLTGGAIGQGLPNA---VGAAIAC------PDRPVIALIGDGTA-------M 417 Query: 201 FNIAALW-----NLNVIYVIENN-QYAM--------GTSVSRASAQTNFSKRGVSFNIPG 246 + + ALW NL+V+ VI NN Y++ G + A++ +G N Sbjct: 418 YTLQALWSMARENLHVVSVIFNNASYSVLNVELERVGAEKAGPKAKSQLDLKGPVLNFAQ 477 Query: 247 MQVDGMDIRAVKATMD----KAVAYCRAHKGPIIIEML 280 + GM + AV+A+ +A+ Y AH GP +IE L Sbjct: 478 L-AQGMGVHAVRASTAEDFCQALEYALAHPGPHLIEAL 514 >gi|312208042|pdb|3OOY|A Chain A, Crystal Structure Of Human Transketolase (Tkt) gi|312208043|pdb|3OOY|B Chain B, Crystal Structure Of Human Transketolase (Tkt) Length = 616 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 119 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAIL 178 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 179 DINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 232 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 233 AIIAKTFKGRG 243 >gi|168185658|ref|ZP_02620293.1| transketolase [Clostridium botulinum C str. Eklund] gi|169296443|gb|EDS78576.1| transketolase [Clostridium botulinum C str. Eklund] Length = 274 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A A K + D GDG +GQV+E+ AA + L N+ ++ Sbjct: 117 GSLGQGISVAVGMAMAGKLDKKDFRVYAMLGDGELAEGQVWEASMAAAHYKLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + + +F + +DG D V +D+A + KG P Sbjct: 177 YNGLQIDGKTKDVMCSDPLDAKFEAFGWHVITIDGNDFEEVIKAIDEA----KTTKGKPT 232 Query: 276 IIEMLTYRYRGHS 288 +I T + +G S Sbjct: 233 MILAKTIKGKGVS 245 >gi|149758847|ref|XP_001494432.1| PREDICTED: similar to Transketolase-like 1 [Equus caballus] Length = 596 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+ ++L N++ V Sbjct: 94 GWLGQGLGAACGMAYTGKYFDKASYRVFCLLGDGEFSEGSVWEALAFASHYSLDNLVAVF 153 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + + KR +F VDG D+ A+ +A + P Sbjct: 154 DVNRLGHSGTLPLENCIDVYQKRCEAFGWNTYVVDGRDVEALCQVFWQAA---QVKNKPT 210 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 211 AVVAKTFKGRG 221 >gi|119474635|ref|ZP_01614988.1| 1-deoxy-D-xylulose-5-phosphate synthase [marine gamma proteobacterium HTCC2143] gi|119450838|gb|EAW32071.1| 1-deoxy-D-xylulose-5-phosphate synthase [marine gamma proteobacterium HTCC2143] Length = 632 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 2/82 (2%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + + D+ CV GDGA G +E+ A+ + N++ ++ Sbjct: 123 GVGHSSTSISAALGMAIAARQQGLDRKCVAVIGDGAMTAGMAFEALTHASHVDANMLVIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSK 237 +N M S + T FSK Sbjct: 183 NDN--LMSISHNTGGLNTYFSK 202 >gi|134099865|ref|YP_001105526.1| transketolase [Saccharopolyspora erythraea NRRL 2338] gi|133912488|emb|CAM02601.1| transketolase A [Saccharopolyspora erythraea NRRL 2338] Length = 607 Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust. Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 11/134 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSD----KICVVCFGDGAANQGQVYESFNIAALWNL-NVI 212 G +G + +G G+A K R D ++ V+C GD +G ++E+F AA L N++ Sbjct: 112 GSLGQGLPVGVGLALTGK--RLDQLPYRVWVLC-GDSEMAEGSIWEAFEHAAYSGLDNLV 168 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +++ N+ ++ + + +++DG D+ ++A D+A Sbjct: 169 AIVDVNRLGQTGETMHGWDLDYYAAKAKACGWRTIEIDGHDLEQIEAAYDQATT---PSD 225 Query: 273 GPIIIEMLTYRYRG 286 GP +I T + +G Sbjct: 226 GPTVILARTKKGKG 239 >gi|88802444|ref|ZP_01117971.1| acetoin dehydrogenase (TPP-dependent) beta chain [Polaribacter irgensii 23-P] gi|88781302|gb|EAR12480.1| acetoin dehydrogenase (TPP-dependent) beta chain [Polaribacter irgensii 23-P] Length = 817 Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust. Identities = 66/287 (22%), Positives = 119/287 (41%), Gaps = 54/287 (18%) Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACG-VDASKIMAEL------------TGRQ 133 G+E + M + +GD YR+ ++A G + A + A L GRQ Sbjct: 56 GKEVPQLAMAKAFKKGDFRSGYYRDQTFMMAIGELTAQQFFAGLYAHTNIEIEPMSAGRQ 115 Query: 134 GG-----ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK------- 181 G S + GS + + Q+ G+A A+K R++K Sbjct: 116 MGGHFATHSLHEDGSWKNLTEQYNSSADISPTAGQMPRLLGLAQASKVYRNEKSVQHKTN 175 Query: 182 -------ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + G+ + ++G +E+ N A + + ++ + +++Y G SV A QT Sbjct: 176 FSNKGNEVAWGTIGNASTSEGLFFETINAAGVLQVPMVMSVWDDEY--GISV-HAKHQT- 231 Query: 235 FSKRGVSFNIPGMQ------------VDGMDIRAVKATMDKAVAYCRAHKGPIIIEM--L 280 +K +S + G Q V+G D + +KA R PI+I + L Sbjct: 232 -TKESISEILKGFQRDKDSNGYEIFVVNGWDYVQLVDVYNKAGQIAREEHVPILIHVNEL 290 Query: 281 TYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASE 326 T + +GHS S Y+ +E + + HD +E++RK +L + A++ Sbjct: 291 T-QPQGHSTSGSHERYKGKERL-QWEKEHDCLEKMRKWILDFELATD 335 >gi|112950411|gb|ABI26724.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens] Length = 639 Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 5/100 (5%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 ++GG+S G + S + F GH +S G G+A A SD+ + GDG+ Sbjct: 99 QEGGLS---GFTRRAESEYDDFGAGHS--STSISAGLGMAVAAGLDESDRKVIAVIGDGS 153 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + G +E+ N A + +I ++ +N ++ SA Sbjct: 154 MSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSA 193 >gi|54038193|gb|AAH84282.1| LOC779025 protein [Xenopus laevis] Length = 480 Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust. Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 9/150 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ K+ V C GDG ++G V+E+ A + L N++ + Sbjct: 149 GSLGQGLGAACGMAYTGKFFDKASYRVFCLLGDGEVSEGSVWEAMAFAGFYKLDNLVAIF 208 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A C P Sbjct: 209 DVNRLGQSEPAPLQHKVEVYQKRCEAFGWHSLVVDGHSVEEL------CKALCHVKNQPT 262 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINEM 304 I T++ +G S + D N+ + E+ Sbjct: 263 AIIAKTFKGKGISGVEDKENWHGKPLPKEL 292 >gi|87299429|dbj|BAE79547.1| 1-deoxyxylulose 5-phosphate synthase [Chrysanthemum x morifolium] Length = 669 Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A + + GDGA GQ YE+ N A Sbjct: 126 SVHDAFGAGHS--STSISAGLGMAVGRDLLGKNNNVISVIGDGAMTAGQAYEAMNNAGFL 183 Query: 208 NLNVIYVIENNQ 219 + N+I V+ +N+ Sbjct: 184 DSNLIVVLNDNK 195 >gi|161612927|ref|YP_001586892.1| hypothetical protein SPAB_00633 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197265907|ref|ZP_03165981.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|161362291|gb|ABX66059.1| hypothetical protein SPAB_00633 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197244162|gb|EDY26782.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 276 Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 5/112 (4%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKI-CVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K RR +++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLARRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 I+ N+ + + + + +F + V G DI + A + + Sbjct: 173 IDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDISGLLAVVQPVLP 224 >gi|326202193|ref|ZP_08192063.1| Transketolase domain-containing protein [Clostridium papyrosolvens DSM 2782] gi|325987988|gb|EGD48814.1| Transketolase domain-containing protein [Clostridium papyrosolvens DSM 2782] Length = 278 Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A A K GDG +G V+E+ AA + L N+ +++ Sbjct: 115 GALGHGLSISVGMALAAKMDGRSYRVFTLMGDGEQAEGSVWEAAMSAAHYKLDNLTAIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N+ + S + + + SF +QVDG D + + Sbjct: 175 RNKLQISGSTEEVMSLDSLEDKWRSFGWEVIQVDGHDYKQL 215 >gi|323483753|ref|ZP_08089133.1| transketolase domain-containing protein [Clostridium symbiosum WAL-14163] gi|323402944|gb|EGA95262.1| transketolase domain-containing protein [Clostridium symbiosum WAL-14163] Length = 284 Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 8/138 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S GIA+ + + + GDG +GQV+E AA L N+I ++ Sbjct: 119 GSLGQGASTAAGIAYGMQLDGKTNMVYLILGDGEIQEGQVWEMALFAAHRKLSNLIAFVD 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK-GPI 275 N + + + ++ SF VDG D+ AV +AV ++ K P Sbjct: 179 YNHVQLDGYTDDICSLGDVREKFESFGWFAQDVDGHDVEAVA----QAVKIAKSQKEKPS 234 Query: 276 IIEMLTYRYRGHSMSDPA 293 +I + T +GH S+ A Sbjct: 235 MIVLET--EKGHGWSEIA 250 >gi|301767156|ref|XP_002919010.1| PREDICTED: transketolase-like [Ailuropoda melanoleuca] Length = 597 Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N+I ++ Sbjct: 97 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLIAIL 156 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 157 DVNRLGQSDPTPLQHQVDVYQKRCEAFGWHTVIVDGHSVEEL------CKAFGQAKHQPT 210 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 211 AIVAKTFKGRG 221 >gi|166797528|gb|ABY89348.1| TKT2-like protein [Macropus eugenii] Length = 618 Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+ A+ + L N++ + Sbjct: 116 GSLGQGLGAACGMAYTGKYFDKASYRVYCLMGDGESSEGSVWEALAFASYYKLDNLVAIF 175 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + + KR +F VDG D+ + +A + P Sbjct: 176 DVNRLGQSEAAPLQHCTDIYQKRCEAFGWNTYVVDGHDVEQLCEVFWQAT---QVKNQPT 232 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 233 AIVAKTFKGRG 243 >gi|227888789|ref|ZP_04006594.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus johnsonii ATCC 33200] gi|227850626|gb|EEJ60712.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus johnsonii ATCC 33200] Length = 586 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 20/147 (13%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G V+L TG+A A + GDG+ G +E FN AA N+I Sbjct: 115 YFAVGHTSTSVALATGMARARDMLGEHENITALIGDGSLTGGLAFEGFNNAADEKHNLII 174 Query: 214 VIENNQYAMGTSV-------------SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 V+ +NQ ++ +V + +A F+ G+ + G G DI+A Sbjct: 175 VVNDNQMSIDDNVGGVVTALKKLRESNGQTADNPFTAMGLDYKYVGQ---GNDIKA---- 227 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGH 287 M A + PI++ + T + +G+ Sbjct: 228 MIDAFKSIKDIDHPIVLHINTLKGKGY 254 >gi|254488653|ref|ZP_05101858.1| transketolase [Roseobacter sp. GAI101] gi|214045522|gb|EEB86160.1| transketolase [Roseobacter sp. GAI101] Length = 284 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 3/121 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A K +++ DG ++G +E+ A W L N+I +++ Sbjct: 124 GSLGHGLGIAVGMAMGLKRKKNPAFVYNLMSDGELDEGSTWEAVMSAVQWKLDNLICIVD 183 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 NNQ A G + A A + + +F +VDG D+ A+ A D A A I Sbjct: 184 FNNQQADGPT-RDALAVGAEAPKWEAFGWFAQEVDGNDLDALVAAFDAARDLTDARPRVI 242 Query: 276 I 276 I Sbjct: 243 I 243 >gi|33519791|ref|NP_878623.1| 2-oxoglutarate dehydrogenase E1 component [Candidatus Blochmannia floridanus] gi|33504136|emb|CAD83398.1| 2-oxoglutarate dehydrogenase E1 component [Candidatus Blochmannia floridanus] Length = 970 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 11/155 (7%) Query: 184 VVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTS----VSRASAQTNF 235 + GD A + QG V E+ N+A +V I+++ NNQ TS + T+ Sbjct: 379 ITIHGDAAISAQGVVQETLNMANTRAYSVGGTIHIVINNQIGFTTSNIDDIRSTPYCTDI 438 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 +K P + V+ D+ AV A+ + K I+I+++ YR GH+ +D + Sbjct: 439 AKM---IQAPILHVNADDVHAVIFVTRFALNFRNKFKHDIVIDLVCYRRHGHNETDEPHV 495 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 ++R++ +E ++L+ + D+K Sbjct: 496 TQPMMYQKIRNHPTVLELYAQKLIQKNIINVDDIK 530 >gi|332221550|ref|XP_003259926.1| PREDICTED: transketolase-like protein 2-like [Nomascus leucogenys] Length = 625 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+F A+ +NL N++ V Sbjct: 123 GSLGQGLGTACGMAYTGKYLDKASYRVFCLMGDGESSEGSVWEAFAFASHYNLDNLVAVF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + +F VDG D+ A+ +A + P Sbjct: 183 DVNRLGQSGPAPLKRGADIYQNCCEAFGWNTYLVDGHDVEALCQAFWQA---SQVKNKPT 239 Query: 276 IIEMLTYRYRG-HSMSDPANY 295 + T++ RG ++ D N+ Sbjct: 240 AVVAKTFKDRGIPNIEDAENW 260 >gi|297674599|ref|XP_002815309.1| PREDICTED: transketolase-like protein 2-like isoform 1 [Pongo abelii] Length = 625 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+F A+ +NL N++ V Sbjct: 123 GSLGQGLGAACGMAYTGKYLDKASYRVFCLMGDGESSEGSVWEAFAFASHYNLDNLVAVF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + +F VDG D+ A+ +A + P Sbjct: 183 DVNRLGQSGPAPLEHGADIYQNCCEAFGWNTYVVDGHDVEALCQAFWQA---SQVKNKPT 239 Query: 276 IIEMLTYRYRG-HSMSDPANY 295 I T++ RG ++ D N+ Sbjct: 240 AIVAKTFKGRGIANIEDAENW 260 >gi|296114442|ref|ZP_06833095.1| 2-oxoglutarate dehydrogenase, E1 subunit [Gluconacetobacter hansenii ATCC 23769] gi|295978798|gb|EFG85523.1| 2-oxoglutarate dehydrogenase, E1 subunit [Gluconacetobacter hansenii ATCC 23769] Length = 954 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 4/126 (3%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 + ++R + ++ GD A A QG VYE+ ++ L ++V+ NNQ T A Sbjct: 354 DPHQRGRHMGILLHGDAAFAGQGIVYETLAMSQLIGYRTGGTVHVVVNNQIGFTTVSIHA 413 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + + P V+G + AV A + + ++I+++ YR GH+ Sbjct: 414 FSGLYCTDIAKAVQAPIFHVNGDEPEAVVYCARLAAEFRQKFASDVVIDIVGYRRHGHNE 473 Query: 290 SDPANY 295 SD ++ Sbjct: 474 SDEPSF 479 >gi|262370604|ref|ZP_06063929.1| deoxyxylulose-5-phosphate synthase [Acinetobacter johnsonii SH046] gi|262314404|gb|EEY95446.1| deoxyxylulose-5-phosphate synthase [Acinetobacter johnsonii SH046] Length = 633 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 34/237 (14%) Query: 17 LNPSVSAKRAATSSVDCVDIPF-LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGM 75 L + A R T +D +D P L E S+ + + +R+F LY Sbjct: 2 LYTEIPAHRPVTPLLDTIDHPQQLRSLEQSQLAQVADE--------LRQF-----ILYAA 48 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGR 132 G GG +G + V + T D++I ++ + H LTGR Sbjct: 49 GQSGGHFGANLGVVELTVALHYCFNTPNDRLIWDVGHQAYPH------------KALTGR 96 Query: 133 QGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCFG 188 + ++ + K G + + G+ +S G G+A A +Y+ + V G Sbjct: 97 REQLTTIRAKDGLAAFPARDESVFDTFGVGHSSTAISAGLGMALARRYQNNPCEVVAIIG 156 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV-SRASAQTNFSKRGVSFNI 244 DGA G +E+ N A + +++ V+ +N ++ S A + + G S NI Sbjct: 157 DGAMTAGMAFEAMNDAVAHDADLMVVLNDNDMSISCSTGGFAKHLASIWESGQSINI 213 >gi|288940188|ref|YP_003442428.1| deoxyxylulose-5-phosphate synthase [Allochromatium vinosum DSM 180] gi|288895560|gb|ADC61396.1| deoxyxylulose-5-phosphate synthase [Allochromatium vinosum DSM 180] Length = 634 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 19/75 (25%), Positives = 36/75 (48%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A K R + + GDGA G +E+ N A +++++ ++ Sbjct: 127 GVGHSSTSISAALGMALAAKQRGERRTVIAIIGDGALGAGMAFEALNHAGSMDIDLVVIL 186 Query: 216 ENNQYAMGTSVSRAS 230 +N+ ++ V S Sbjct: 187 NDNEMSISPPVGAIS 201 >gi|21672569|ref|NP_660636.1| alpha-ketoglutarate decarboxylase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008873|sp|Q8K9N3|ODO1_BUCAP RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|21623197|gb|AAM67847.1| 2-oxoglutarate dehydrogenase E1 component [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 923 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 66/318 (20%), Positives = 132/318 (41%), Gaps = 30/318 (9%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG----MGMVGGFCHLCIGQEAVIVGMKM 97 F+ + F K++++ + +L FE+ G+ + + GG + I E + K Sbjct: 183 FKENLFIKKEKIRFLKEILYGETFEKYLGKKFSGTKRFSLEGGETLISILHEIIRYSKKN 242 Query: 98 SLTE----------GDQMITAYREHGHILACGVDASKIMAELTG----RQGGISKGKGGS 143 ++E + ++ ++ +L I E +G GGI+K K Sbjct: 243 DVSEIILGMAHRGRLNVLVNVLNKNPQVLFNEFSGINIPKEYSGDVKYHMGGITKIKNDK 302 Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK--ICVVCFGDGAA-NQGQVYES 200 ++ K + H + V LG A N+ + S+ + + GD + QG + E+ Sbjct: 303 KKIY-LKLAYNPSHLEIVNPVVLGIARASINQLKISENKFLSINIHGDASIIGQGVIQET 361 Query: 201 FNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRA 256 N++ + I+++ NNQ TS + + + + P V+ DI A Sbjct: 362 LNMSQTEAYKIGGTIHIVINNQIGFTTSNPKNLRSSKYCTDVAKMIQAPVFHVNADDIEA 421 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVR 315 + A+ + + K + I+++ YR GH+ + DP + T+ + + NH I Q+ Sbjct: 422 SIFAIQLALKFKKKFKKDVFIDLVCYRRHGHNEVDDP--FVTQPIMYKKIHNHPTIGQIY 479 Query: 316 KRLL-HNKWASEGDLKEI 332 LL K + D+++I Sbjct: 480 SNLLISEKLITSNDIEKI 497 >gi|168206127|ref|ZP_02632132.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens E str. JGS1987] gi|170662471|gb|EDT15154.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens E str. JGS1987] Length = 619 Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust. Identities = 40/190 (21%), Positives = 71/190 (37%), Gaps = 53/190 (27%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +S G+A A + D + GDGA G E+ N N+I Sbjct: 112 FATGHS--STSLSSAAGMARAQRLLGKDNKVIAVIGDGALTGGMALEALNDIGYRKDNLI 169 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFN----------------------------- 243 ++ +NQ ++ +V + N + GV +N Sbjct: 170 IILNDNQMSICKNVGGLATYLNKLRMGVGYNKLKSDIGSTLDTTSLGKRVKNSLSKLKDG 229 Query: 244 -----IPGMQ-----------VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +P M VDG +IR +++ ++ + KGP+II +T + +G+ Sbjct: 230 IKKIVVPSMYFEDIGLKYFGIVDGHNIRE----LNEVLSIAKNIKGPVIIHTVTKKGKGY 285 Query: 288 SMSD--PANY 295 +++ P Y Sbjct: 286 ELAEKNPNKY 295 >gi|78189399|ref|YP_379737.1| transketolase-like [Chlorobium chlorochromatii CaD3] gi|78171598|gb|ABB28694.1| transketolase subunit A [Chlorobium chlorochromatii CaD3] Length = 297 Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust. Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 9/149 (6%) Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQ 219 G V++G +A ++SD C++ GDG +GQ++E+ AA + L N+I ++++N Sbjct: 135 GLSVAVGAAMAMKMDGKQSDVFCLM--GDGECQEGQIWEAAMSAAHYKLGNLIGIVDDNN 192 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 + VS + +F ++ DG ++ + A ++ A + P ++ Sbjct: 193 MQIDGEVSEVLGVAPLPDKWRAFGWDVVECDGNNMDELVAVLEGLRAVPNRQR-PTVLLA 251 Query: 280 LTYRYRGHS-----MSDPANYRTREEINE 303 T +G M D +N+ + E Sbjct: 252 KTVMGKGVPFFEGLMPDKSNWHGKPPSKE 280 >gi|2894445|emb|CAA74713.1| transketolase [Arabidopsis thaliana] Length = 739 Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ G M NG G G G +S G G+A + + Sbjct: 175 ILTGRRGKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAIGRDLKGKNNNV 234 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 235 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 270 >gi|213511480|ref|NP_001134006.1| transketolase-like protein 2 [Salmo salar] gi|209156132|gb|ACI34298.1| Transketolase [Salmo salar] Length = 626 Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 7/132 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ K+ + C GDG ++G V+E+ + +NL N++ +I Sbjct: 123 GSLGQGLGAACGMAYTGKHFDKSSYRLYCMLGDGECSEGAVWEAMAFGSHYNLDNLVAII 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 + N+ + + KR +F VDG D+ + KA+ + KG P Sbjct: 183 DANRLGQSEAAPLKHDMDVYRKRCEAFGWNTYVVDGHDVE----ELCKALWQAQQVKGKP 238 Query: 275 IIIEMLTYRYRG 286 +I T++ RG Sbjct: 239 TMIIAKTFKGRG 250 >gi|189069449|dbj|BAG37115.1| unnamed protein product [Homo sapiens] Length = 626 Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 6/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+F A+ +NL N++ V Sbjct: 124 GSLGQGLGTACGMAYTGKYLDKASHRVFCLMGDGESSEGSVWEAFAFASHYNLDNLVAVF 183 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + +F VDG D+ A+ +A + P Sbjct: 184 DVNRLGQSGPAPLEHGADIYQNCCEAFGWNTYLVDGHDVEALCQAFWQA---SQVKNKPT 240 Query: 276 IIEMLTYRYRG-HSMSDPANY 295 I T++ RG ++ D N+ Sbjct: 241 AIVAKTFKGRGIPNIEDAENW 261 >gi|15828982|ref|NP_326342.1| transketolase [Mycoplasma pulmonis UAB CTIP] gi|14089925|emb|CAC13684.1| TRANSKETOLASE (TK) [Mycoplasma pulmonis] Length = 615 Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 11/130 (8%) Query: 158 GIVGAQVSLGTGIAFA-----NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 G +G +++ G+A A ++++ D V GDG +G E+ ++A L + Sbjct: 114 GPLGQGLAMAVGLALAQAHLNSRFKELDHYTYVLCGDGDLQEGVANEALDLAGHLGLKKL 173 Query: 213 YVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 V+ ++N + + V + N KR + N + VD + I +DKA+ +A Sbjct: 174 IVLYDSNDVQLDSKVDIVYSSNN-KKRFEAMNFNYILVDKVSIE----NIDKAIEKAKAS 228 Query: 272 KGPIIIEMLT 281 P IIE+ T Sbjct: 229 SKPTIIEIKT 238 >gi|313233575|emb|CBY09747.1| unnamed protein product [Oikopleura dioica] Length = 622 Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 7/129 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G ++ G+A+ K V C GDG + +G V+E+ A+ + L N+ +I Sbjct: 122 GSLGQGLANACGMAWVAKNIDKAPYRVFCMMGDGESAEGSVWEAMQFASHYKLDNLCAII 181 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 + N+ + + + RG ++ + + +DG D+ AV DKA KG P Sbjct: 182 DVNRLGQSEATALGHEMEIYRARGEAWGMHTLVIDGHDVNAV----DKAFHEAEITKGKP 237 Query: 275 IIIEMLTYR 283 +I T++ Sbjct: 238 TLIIAKTFK 246 >gi|294651668|ref|ZP_06728971.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter haemolyticus ATCC 19194] gi|292822447|gb|EFF81347.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter haemolyticus ATCC 19194] Length = 631 Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 20/110 (18%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKY 176 LTGR+ I+ TKNG G G +S G G+A A +Y Sbjct: 93 LTGRREQITT--------IRTKNGLAAFPARDESEFDTFGVGHSSTAISAGLGMALARRY 144 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 ++ V GDGA G +E+ N A + ++I V+ +N ++ S Sbjct: 145 QKDPCDVVAIVGDGAMTAGMAFEAMNDAVAHDADLIVVLNDNDMSISCST 194 >gi|18310801|ref|NP_562735.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens str. 13] gi|21263510|sp|Q8XJE1|DXS_CLOPE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|18145482|dbj|BAB81525.1| 1-deoxyxylulose-5-phosphate synthase [Clostridium perfringens str. 13] Length = 619 Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust. Identities = 40/190 (21%), Positives = 71/190 (37%), Gaps = 53/190 (27%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +S G+A A + D + GDGA G E+ N N+I Sbjct: 112 FATGHS--STSLSSAAGMARAQRLLGKDNKVIAVIGDGALTGGMALEALNDIGYRKDNLI 169 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFN----------------------------- 243 ++ +NQ ++ +V + N + GV +N Sbjct: 170 IILNDNQMSICKNVGGLATYLNKLRMGVGYNKLKSDIGSTLDTTSLGKRVKNSLSKLKDG 229 Query: 244 -----IPGMQ-----------VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +P M VDG +IR +++ ++ + KGP+II +T + +G+ Sbjct: 230 IKKIVVPSMYFEDIGLKYFGIVDGHNIRE----LNEVLSIAKNIKGPVIIHTVTKKGKGY 285 Query: 288 SMSD--PANY 295 +++ P Y Sbjct: 286 ELAEKNPNKY 295 >gi|307204872|gb|EFN83427.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial [Harpegnathos saltator] Length = 1080 Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust. Identities = 31/162 (19%), Positives = 70/162 (43%), Gaps = 4/162 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG V+E+ +++ L + I+++ NNQ T + + + Sbjct: 412 MSILLHGDAAFCGQGIVFETMHLSDLPDYTTHGTIHIVVNNQIGFTTDPRHSRSSPYCTD 471 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV A + ++I++++YR GH+ D + Sbjct: 472 VARVVNAPIFHVNSDDPEAVMHVCKVAAEWRATFHKDVVIDLVSYRRNGHNEIDEPMFTQ 531 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 ++++ +++ LL + + ++K+++ KI Sbjct: 532 PLMYRKIKNTPPALDKYASTLLADSVVTPEEVKDVKDKYEKI 573 >gi|226953840|ref|ZP_03824304.1| 1-deoxyxylulose-5-phosphate synthase [Acinetobacter sp. ATCC 27244] gi|226835431|gb|EEH67814.1| 1-deoxyxylulose-5-phosphate synthase [Acinetobacter sp. ATCC 27244] Length = 631 Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 20/110 (18%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKY 176 LTGR+ I+ TKNG G G +S G G+A A +Y Sbjct: 93 LTGRREQITT--------IRTKNGLAAFPARDESEFDTFGVGHSSTAISAGLGMALARRY 144 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 ++ V GDGA G +E+ N A + ++I V+ +N ++ S Sbjct: 145 QKDPCDVVAIVGDGAMTAGMAFEAMNDAVAHDADLIVVLNDNDMSISCST 194 >gi|90411599|ref|ZP_01219609.1| putative 2-oxoglutarate dehydrogenase, E1 component [Photobacterium profundum 3TCK] gi|90327489|gb|EAS43842.1| putative 2-oxoglutarate dehydrogenase, E1 component [Photobacterium profundum 3TCK] Length = 937 Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 11/162 (6%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQGQ 196 GG +H+ F H + V +G+ A ++ SD + + GD A A QG Sbjct: 312 GGDVHL---ALAFNPSHLEIVNPVVVGSVRARQDRLGDSDGSKVLPITLHGDSAIAGQGV 368 Query: 197 VYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGM 252 V E+FN++ V + ++ NNQ TS + T + + P V+ Sbjct: 369 VAETFNMSQARGYRVGGTVRIVVNNQIGFTTSNPQDMRSTEYCTDIAKMVQAPIFHVNAD 428 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 D AV A + K ++I+++ YR GH+ +D N Sbjct: 429 DPEAVAFVTRIAFDFRNTFKRDVVIDLVCYRRHGHNEADEPN 470 >gi|312886620|ref|ZP_07746227.1| transketolase subunit A [Mucilaginibacter paludis DSM 18603] gi|311300722|gb|EFQ77784.1| transketolase subunit A [Mucilaginibacter paludis DSM 18603] Length = 280 Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust. Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S+ G+A K R V GDG N+G +E+ +A L N+I+VI+ Sbjct: 111 GSLGHLPSVALGVALDIKMRGGSNKVVCILGDGELNEGSCWEAILVANAHKLDNLIFVID 170 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 N++ + +F ++DG A++ Sbjct: 171 RNKFQANMPTEELIPLEPLHDKFTAFGAAVKRIDGHSFEALR 212 >gi|298373569|ref|ZP_06983558.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroidetes oral taxon 274 str. F0058] gi|298274621|gb|EFI16173.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroidetes oral taxon 274 str. F0058] Length = 634 Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust. Identities = 18/67 (26%), Positives = 35/67 (52%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G G++ A+K + D+ V GDG+ G +E N ++ + N++ ++ Sbjct: 117 GTGHASTSISAGLGMSVASKIKNEDRNVVAVIGDGSLTGGLAFEGLNNTSIIDNNLLIIV 176 Query: 216 ENNQYAM 222 +N A+ Sbjct: 177 NDNDMAI 183 >gi|251790494|ref|YP_003005215.1| 2-oxoglutarate dehydrogenase E1 component [Dickeya zeae Ech1591] gi|247539115|gb|ACT07736.1| 2-oxoglutarate dehydrogenase, E1 subunit [Dickeya zeae Ech1591] Length = 935 Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 5/156 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+ N++ V I ++ NNQ TS R + T + + Sbjct: 352 LPITIHGDAAITGQGVVQETLNMSKARGYEVGGTIRIVINNQVGFTTSNPRDARSTEYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 G P V+ D AV A+ + + + I+++ YR GH+ +D + Sbjct: 412 DIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFQRDVFIDLVCYRRHGHNEADEPSAT 471 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +++ + P + RL K A+ D E+ Sbjct: 472 QPVMYQKIKKHPTPRKIYADRLEQQKVATLEDATEL 507 >gi|1399261|gb|AAC49368.1| DEF [Arabidopsis thaliana] Length = 717 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ G M NG G G G +S G G+A + + Sbjct: 153 ILTGRRGKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNV 212 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 213 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248 >gi|42521102|ref|NP_967017.1| alpha-ketoglutarate decarboxylase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410843|gb|AAS14951.1| 2-oxoglutarate dehydrogenase, E1 component [Wolbachia endosymbiont of Drosophila melanogaster] Length = 884 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 8/114 (7%) Query: 188 GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 GD A QG V E+ ++ + V ++++ NNQ +G + + A+++F ++ + Sbjct: 300 GDAAFIGQGVVAETLTLSNIEGYKVDGIVHIVINNQ--VGFTANPCCARSSFYCTDIAKS 357 Query: 244 I--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 I P V+G + AV A+ Y + K ++I+++ YR GH+ D N+ Sbjct: 358 IEAPVFHVNGDNPEAVSFATSLAMEYRQKFKKDVVIDIMCYRKYGHNEGDEPNF 411 >gi|27377762|ref|NP_769291.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum USDA 110] gi|41016964|sp|Q89RW1|DXS_BRAJA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|27350907|dbj|BAC47916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum USDA 110] Length = 661 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + GG + F+ + + F H +S G G+A A Sbjct: 106 LTGRRDRIRTLRTGGGLSGFTKRSESDYDPFGAAHS--STSISAGLGMAVARDLSGGKNN 163 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDGA + G YE+ N A N +I ++ +N ++ V SA Sbjct: 164 VIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSA 212 >gi|325954181|ref|YP_004237841.1| transketolase [Weeksella virosa DSM 16922] gi|323436799|gb|ADX67263.1| Transketolase [Weeksella virosa DSM 16922] Length = 281 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 3/126 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G A A K + + + GDG +GQ++E+F AA N+ N+I I+ Sbjct: 117 GSLGQGLSVALGAAQAKKLNKDNHLIYTLHGDGELQEGQIWEAFMYAAGKNVDNIIATID 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 N + + + + +F + Q +G D+ + T+++A A K P+ Sbjct: 177 YNGRQIDGDTDQVMPLGDLQAKLEAFGWVVFNQEEGNDLEKILQTLEQAKAATGKGK-PV 235 Query: 276 IIEMLT 281 I + T Sbjct: 236 AILLHT 241 >gi|296081990|emb|CBI20995.3| unnamed protein product [Vitis vinifera] Length = 719 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 60/271 (22%), Positives = 113/271 (41%), Gaps = 57/271 (21%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GG+S G + S + F GHG + +S G G+A A + Sbjct: 158 LTGRRALMHTLRERGGLS---GFTSRSESEYDPFGAGHGC--SSISAGLGMAVARDLKGK 212 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY---------------AMGT 224 + V G+G GQVYE+ A + N++ ++ ++++ A+ + Sbjct: 213 RERIVTVIGNGTTMAGQVYEAMGNAGYLDTNMVVILNDSRHSLHPKLEDGQATPINALSS 272 Query: 225 SVSRASAQTNFSK-----RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI---I 276 ++++ + +F K +GV+ I G + + A +D+ Y R GP+ + Sbjct: 273 TLTKLQSSKSFRKFREAAKGVTKRI------GKGMHELAAKVDE---YARGMVGPLGATL 323 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E L Y G D N + + ++ DP V ++ ++ + +E + Sbjct: 324 FEELGLYYIGP--VDGHNIEDLISVLQGVASLDPTGPVLVHVITKEY------QGVEASQ 375 Query: 337 RKIINNS--VEFAQSDKEPDP-AELYSDILI 364 + +I+N F S+ P P +YSD + Sbjct: 376 KSMISNGHLKGFYTSELSPYPLPRMYSDCFV 406 >gi|169343692|ref|ZP_02864691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens C str. JGS1495] gi|169298252|gb|EDS80342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens C str. JGS1495] Length = 619 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 40/190 (21%), Positives = 71/190 (37%), Gaps = 53/190 (27%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +S G+A A + D + GDGA G E+ N N+I Sbjct: 112 FATGHS--STSLSSAAGMARAQRLLGKDNKVIAVIGDGALTGGMALEALNDIGYRKDNLI 169 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFN----------------------------- 243 ++ +NQ ++ +V + N + GV +N Sbjct: 170 IILNDNQMSICKNVGGLATYLNKLRMGVGYNKLKSDIGSTLDTTSLGKRVKNSLSKLKDG 229 Query: 244 -----IPGMQ-----------VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +P M VDG +IR +++ ++ + KGP+II +T + +G+ Sbjct: 230 IKKIVVPSMYFEDIGLKYFGIVDGHNIRE----LNEVLSIAKNIKGPVIIHTVTKKGKGY 285 Query: 288 SMSD--PANY 295 +++ P Y Sbjct: 286 ELAEKNPNKY 295 >gi|71652754|ref|XP_815027.1| 2-oxoglutarate dehydrogenase E1 component [Trypanosoma cruzi strain CL Brener] gi|70880051|gb|EAN93176.1| 2-oxoglutarate dehydrogenase E1 component, putative [Trypanosoma cruzi] Length = 1006 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 11/135 (8%) Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 AQ SLG K S + V GD A + QG V+E+ I+ + + ++V+ Sbjct: 393 AAQASLG-------KDGSSTVLPVEIHGDAAFSGQGIVFETMCISEVDEYSTGGTVHVVV 445 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQ T + + + G F P V+G + V + A + K ++ Sbjct: 446 NNQIGFTTDPKSSRSSAYCTDLGRVFQCPIFHVNGDSVEDVVRIFEFAADFRAKFKKSVV 505 Query: 277 IEMLTYRYRGHSMSD 291 I+++ YR GH+ +D Sbjct: 506 IDLVCYRRFGHNEND 520 >gi|329955339|ref|ZP_08296247.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides clarus YIT 12056] gi|328525742|gb|EGF52766.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides clarus YIT 12056] Length = 586 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 28/165 (16%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH VSL TG+A A + + GDG+ + G+ +E N AA Sbjct: 105 SEHDFFVIGH--TSTSVSLATGLAKARDLKGDTGNVIAVIGDGSLSGGEAFEGLNNAAEL 162 Query: 208 NLNVIYVIENNQYAMGTS------------VSRASAQTNFSKRGVSFNIPGMQV----DG 251 N I ++ +NQ ++ + + A NF F G+ DG Sbjct: 163 GTNFIVIVNDNQMSIAENHGGLYRNLQLLRDTDGQAPCNF------FTAMGLDYLYVKDG 216 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 D++A+ + K + P+++ + T + +G+ +++ R Sbjct: 217 NDVQALISAFQK----VKDIDHPVVVHINTLKGKGYRLAEQQQER 257 >gi|168214393|ref|ZP_02640018.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens CPE str. F4969] gi|168215447|ref|ZP_02641072.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens NCTC 8239] gi|170714157|gb|EDT26339.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens CPE str. F4969] gi|182382315|gb|EDT79794.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens NCTC 8239] Length = 619 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 40/190 (21%), Positives = 71/190 (37%), Gaps = 53/190 (27%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +S G+A A + D + GDGA G E+ N N+I Sbjct: 112 FATGHS--STSLSSAAGMARAQRLLGKDNKVIAVIGDGALTGGMALEALNDIGYRKDNLI 169 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFN----------------------------- 243 ++ +NQ ++ +V + N + GV +N Sbjct: 170 IILNDNQMSICKNVGGLATYLNKLRMGVGYNKLKSDIGSTLDTTSFGKRVKNSLSKLKDG 229 Query: 244 -----IPGMQ-----------VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +P M VDG +IR +++ ++ + KGP+II +T + +G+ Sbjct: 230 IKKIVVPSMYFEDIGLKYFGIVDGHNIRE----LNEVLSIAKNIKGPVIIHTVTKKGKGY 285 Query: 288 SMSD--PANY 295 +++ P Y Sbjct: 286 ELAEKNPNKY 295 >gi|187929505|ref|YP_001899992.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia pickettii 12J] gi|309781718|ref|ZP_07676451.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. 5_7_47FAA] gi|229836074|sp|B2U930|DXS_RALPJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|187726395|gb|ACD27560.1| deoxyxylulose-5-phosphate synthase [Ralstonia pickettii 12J] gi|308919359|gb|EFP65023.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. 5_7_47FAA] Length = 636 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 38/185 (20%), Positives = 71/185 (38%), Gaps = 47/185 (25%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAM 222 +S G+A K + D++ + GDGA + G +E+ N A ++ +L ++ V+ +N ++ Sbjct: 122 ISAALGMALGAKTKGEDRVAIAVIGDGAMSAGMAFEAMNNAGVYKDLPLVVVLNDNDMSI 181 Query: 223 GTSV---------------------------SRASAQTNFSKR----------------G 239 V S A F+KR Sbjct: 182 SPPVGALNRYLARLMSGQFYAATKKGVEKLLSVAPPVLEFAKRFEEHTKGMFVPATMFEE 241 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYRT 297 FN G +DG D+ ++ T+ R GP + ++T + +G+ + +DP Y Sbjct: 242 FGFNYIG-PIDGHDLESLVPTLQNIRQRAREGGGPQFLHVVTKKGQGYKLAEADPILYHG 300 Query: 298 REEIN 302 + N Sbjct: 301 PGKFN 305 >gi|118474435|ref|YP_892720.1| transketolase, N-terminal subunit [Campylobacter fetus subsp. fetus 82-40] gi|118413661|gb|ABK82081.1| transketolase, N-terminal subunit [Campylobacter fetus subsp. fetus 82-40] Length = 252 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 21/128 (16%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 GH + +S+G ++ N+ R+ V GDG +G ++E+ +A NLN + V+ Sbjct: 107 GHAL---PMSVGMAMSIKNENRK----VYVLIGDGETQEGSIWEAAMLAPKLNLNNLCVL 159 Query: 216 --ENNQYAMGTSVSRASAQTNF---SKRGVSFNIPGMQVDGMDIRAVKATM----DKAVA 266 NN G RA T+F K+ SF + VDG D++A++ M DK + Sbjct: 160 IDYNNLQGYG----RAREITSFEPIDKKWESFGWECVIVDGHDVQALQKAMSIKTDKPLC 215 Query: 267 -YCRAHKG 273 C+ KG Sbjct: 216 IVCKTIKG 223 >gi|15234642|ref|NP_193291.1| CLA1 (CLOROPLASTOS ALTERADOS 1); 1-deoxy-D-xylulose-5-phosphate synthase [Arabidopsis thaliana] gi|13124705|sp|Q38854|DXS_ARATH RecName: Full=Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic; Short=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; Flags: Precursor gi|5281019|emb|CAB45992.1| DEF (CLA1) protein [Arabidopsis thaliana] gi|7268304|emb|CAB78598.1| DEF (CLA1) protein [Arabidopsis thaliana] gi|26983842|gb|AAN86173.1| putative DEF (CLA1) protein [Arabidopsis thaliana] gi|332658225|gb|AEE83625.1| Deoxyxylulose-5-phosphate synthase [Arabidopsis thaliana] Length = 717 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ G M NG G G G +S G G+A + + Sbjct: 153 ILTGRRGKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNV 212 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 213 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248 >gi|116629021|ref|YP_814193.1| deoxyxylulose-5-phosphate synthase [Lactobacillus gasseri ATCC 33323] gi|116094603|gb|ABJ59755.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus gasseri ATCC 33323] Length = 431 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 20/147 (13%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G V+L TG+A A + + GDG+ G +E FN AA N+I Sbjct: 115 YYAVGHTSTSVALATGMARARDMMGNHENITALIGDGSLTGGLAFEGFNNAADEKHNLII 174 Query: 214 VIENNQYAMGTSV------------SRASAQTN-FSKRGVSFNIPGMQVDGMDIRAVKAT 260 V+ +NQ ++ +V S A+ N F+ G+ + G G DI+ + Sbjct: 175 VVNDNQMSIDDNVGGVVTALKKLRESNGQAEDNPFTAMGLDYKYVGQ---GNDIK----S 227 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGH 287 M A + PI++ + T + +G+ Sbjct: 228 MIDAFKAVKDIDHPIVLHINTLKGKGY 254 >gi|319950433|ref|ZP_08024348.1| alpha-ketoglutarate decarboxylase [Dietzia cinnamea P4] gi|319435897|gb|EFV91102.1| alpha-ketoglutarate decarboxylase [Dietzia cinnamea P4] Length = 1282 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 4/114 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A A QG V E+ N++ + I+++ NNQ T+ + + Sbjct: 700 VPLMLHGDAAFAGQGVVAETLNLSQIDGYRTGGTIHIVVNNQIGFTTAPEAGRSSQYATD 759 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+G D A A+ + + K ++I+++ YR RGH+ +D Sbjct: 760 VAKMIGSPIFHVNGDDPEACVRVARLAMDFRQQFKKDVVIDLVCYRRRGHNEAD 813 >gi|297804692|ref|XP_002870230.1| hypothetical protein ARALYDRAFT_493326 [Arabidopsis lyrata subsp. lyrata] gi|297316066|gb|EFH46489.1| hypothetical protein ARALYDRAFT_493326 [Arabidopsis lyrata subsp. lyrata] Length = 717 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ G M NG G G G +S G G+A + + Sbjct: 153 ILTGRRGKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNV 212 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 213 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248 >gi|290968588|ref|ZP_06560126.1| transketolase, thiamine diphosphate binding domain protein [Megasphaera genomosp. type_1 str. 28L] gi|290781241|gb|EFD93831.1| transketolase, thiamine diphosphate binding domain protein [Megasphaera genomosp. type_1 str. 28L] Length = 273 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A+A K ++S GDG +GQ++E+ AA L NV +++ Sbjct: 115 GSLGQGLSIANGMAWALKRQQSTSYVFCLIGDGEQQEGQIWEAAMFAAQHKLDNVCLIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + +V+ + + SF VDG I A+ +A Sbjct: 175 VNGLQLVDAVAGIKNMNAAATQWQSFGWHATCVDGHSIPALYEAFRQA 222 >gi|254428797|ref|ZP_05042504.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alcanivorax sp. DG881] gi|196194966|gb|EDX89925.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alcanivorax sp. DG881] Length = 640 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 78/195 (40%), Gaps = 15/195 (7%) Query: 35 DIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG 94 D P L+ +S ++L A +L ++ E LY +G GG +G + V Sbjct: 14 DTPLLD--TLSSPADLRQLPASQLERVVDELREYL--LYAVGQCGGHFGAGLGVVELTVA 69 Query: 95 MK-MSLTEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN 151 + + T D+++ ++ + H + G S G G K F Sbjct: 70 LHYLYHTPDDKLVWDVGHQCYPHKILTGRRESLTSIRQAGGLSGFPKRSESEYDTF---- 125 Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 G G +S G+A + SD+ V GDGA GQ +E+ + AA N+ Sbjct: 126 ----GVGHSSTSISAALGMALGAEMAGSDRRAVAIIGDGAMTAGQAFEAMSHAAHTRSNL 181 Query: 212 IYVIENNQYAMGTSV 226 + ++ +N ++ +V Sbjct: 182 LVILNDNNMSISHNV 196 >gi|186476479|ref|YP_001857949.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia phymatum STM815] gi|184192938|gb|ACC70903.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia phymatum STM815] Length = 951 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 16/145 (11%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D+ + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 336 GSAKARMDRRGDEQGLQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 395 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV A+ + ++++ Sbjct: 396 IGFTTSDPRDARSTLYCSDVVKMIEAPVLHVNGDDPEAVVLATQLAIDFRMQFHKDVVLD 455 Query: 279 MLTYRYRGHSMSD------PANYRT 297 ++ +R GH+ D P Y+T Sbjct: 456 IICFRKLGHNEQDTPAVTQPLMYKT 480 >gi|85375331|ref|YP_459393.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter litoralis HTCC2594] gi|123099471|sp|Q2N6U5|DXS_ERYLH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|84788414|gb|ABC64596.1| 1-D-deoxyxylulose 5-phosphate synthase [Erythrobacter litoralis HTCC2594] Length = 640 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +GG + F+ + + F H +S G G A ANK + Sbjct: 87 LTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHS--STSISAGLGFAVANKLKGEPGK 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + GDGA + G YE+ N A +I ++ +N ++ V Sbjct: 145 AIAVIGDGAMSAGMAYEAMNNAEQAGNRLIVILNDNDMSIAPPV 188 >gi|322420928|ref|YP_004200151.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M18] gi|320127315|gb|ADW14875.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M18] Length = 635 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A+ + D + GDG+ G E+ N A Sbjct: 107 SPHDAFGAGHS--STSISAGLGLAVAHTLKGDDARVISVIGDGSLTGGMALEALNQAGHL 164 Query: 208 NLNVIYVIENNQYAMGTSVSRASA 231 N+I V+ +N+ ++ +V S+ Sbjct: 165 KKNMIVVLNDNEMSISKNVGALSS 188 >gi|226942934|ref|YP_002798007.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azotobacter vinelandii DJ] gi|226717861|gb|ACO77032.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azotobacter vinelandii DJ] Length = 633 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 55/273 (20%), Positives = 102/273 (37%), Gaps = 63/273 (23%) Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAE 128 LY +G GG +G + + + T GD+++ ++ + H + G + Sbjct: 47 LYTVGQTGGHFGAGLGVIELTIALHYVFDTPGDRLVWDVGHQAYPHKILTG----RRERM 102 Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT--GIAFANKYRRSDKICVVC 186 LT RQ K G Y G+ + S+G G+A A + + + C+ Sbjct: 103 LTLRQ------KDGIAAFPRRSESPYDTFGVGHSSTSIGAALGMAIAARLKGERRRCIAV 156 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV------------SRASAQTN 234 GDGA G +E+ N A+ +++ V+ +N ++ +V SR A Sbjct: 157 IGDGALTAGMAFEALNHASDVQADMLVVLNDNDMSISKNVGGLSNYLAKILSSRTYASMR 216 Query: 235 FSKRGVSFNIPGM------------------------------QVDGMDIRAVKATMDKA 264 + + +PG +DG D+ + AT+ Sbjct: 217 EGSKNILSRLPGAWEIARRTEEYAKGMLVPGTLFEELGWNYIGPIDGHDLPTLLATLRN- 275 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSM--SDPANY 295 R KGP ++ ++T + +G + +DP Y Sbjct: 276 ---MRDLKGPQLLHVVTKKGKGFAPAEADPIGY 305 >gi|218548251|ref|YP_002382042.1| carbohydrate degradation enzyme [Escherichia fergusonii ATCC 35469] gi|218355792|emb|CAQ88405.1| putative carbohydrate degradation enzyme [Escherichia fergusonii ATCC 35469] gi|324112831|gb|EGC06807.1| transketolase [Escherichia fergusonii B253] Length = 276 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 12/153 (7%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K R++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLAGRKNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ++ N+ + + + + +F + V G DI + + K V A P Sbjct: 173 VDWNKQQLDGQLDEIINPFDLESKFRAFGFDVVTVKGDDIEGLLNVV-KPVPPAEAR--P 229 Query: 275 IIIEMLTYRYRG----HSMSDPANYRTREEINE 303 ++ + + + +G +S+ + R EE+ E Sbjct: 230 RVVILDSIKGQGVPCLEQLSNSHHLRLTEEMKE 262 >gi|182625661|ref|ZP_02953430.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens D str. JGS1721] gi|177909063|gb|EDT71538.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens D str. JGS1721] Length = 619 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 40/190 (21%), Positives = 71/190 (37%), Gaps = 53/190 (27%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +S G+A A + D + GDGA G E+ N N+I Sbjct: 112 FATGHS--STSLSSAAGMARAQRLLGKDNKVIAVIGDGALTGGMALEALNDIGYRKDNLI 169 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFN----------------------------- 243 ++ +NQ ++ +V + N + GV +N Sbjct: 170 IILNDNQMSICKNVGGLATYLNKLRMGVGYNKLKSDIGSTLDTTSFGKRVKNSLSKLKDG 229 Query: 244 -----IPGMQ-----------VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +P M VDG +IR +++ ++ + KGP+II +T + +G+ Sbjct: 230 IKKIVVPSMYFEDIGLKYFGIVDGHNIRE----LNEVLSIAKNIKGPVIIHTVTKKGKGY 285 Query: 288 SMSD--PANY 295 +++ P Y Sbjct: 286 ELAEKNPNKY 295 >gi|168002605|ref|XP_001754004.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694980|gb|EDQ81326.1| predicted protein [Physcomitrella patens subsp. patens] Length = 725 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ G M +G G G G +S G G+A + Sbjct: 158 ILTGRRGKMQTLRQTDGLSGFVKRAESEYDPFGAGHSSTSISAGLGMAVGRDLKGKKNNV 217 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA GQ YE+ N A + N+I ++ +N+ Sbjct: 218 ISVIGDGAMTAGQAYEAMNNAGYLDCNMIVILNDNK 253 >gi|46410858|gb|AAS94123.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis] Length = 720 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH NG G G G +S G G+A + Sbjct: 152 ILTGRRDKMHTIRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRKNNV 211 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 212 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 247 >gi|110799458|ref|YP_696502.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens ATCC 13124] gi|168210818|ref|ZP_02636443.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens B str. ATCC 3626] gi|118595504|sp|Q0TPD8|DXS_CLOP1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|110674105|gb|ABG83092.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens ATCC 13124] gi|170711161|gb|EDT23343.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium perfringens B str. ATCC 3626] Length = 619 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 40/190 (21%), Positives = 71/190 (37%), Gaps = 53/190 (27%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +S G+A A + D + GDGA G E+ N N+I Sbjct: 112 FATGHS--STSLSSAAGMARAQRLLGKDNKVIAVIGDGALTGGMALEALNDIGYRKDNLI 169 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFN----------------------------- 243 ++ +NQ ++ +V + N + GV +N Sbjct: 170 IILNDNQMSICKNVGGLATYLNKLRMGVGYNKLKSDIGSTLDTTSFGKRVKNSLSKLKDG 229 Query: 244 -----IPGMQ-----------VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +P M VDG +IR +++ ++ + KGP+II +T + +G+ Sbjct: 230 IKKIVVPSMYFEDIGLKYFGIVDGHNIRE----LNEVLSIAKNIKGPVIIHTVTKKGKGY 285 Query: 288 SMSD--PANY 295 +++ P Y Sbjct: 286 ELAEKNPNKY 295 >gi|46361693|gb|AAS89342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Taxus x media] Length = 742 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 8/97 (8%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ +S + G S + F GH +S G+A Sbjct: 177 LTGRRSNMSSIRQTSGIAGFPKRAESEHDAFGAGHS--STSISAALGMAAGRDLLGLPNH 234 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 C+ GDGA GQ YE+ N A + N+I ++ +N+ Sbjct: 235 CIAVIGDGAMTAGQAYEAMNNAGFLDSNLIIILNDNK 271 >gi|8000868|gb|AAD56390.2|AF182286_1 1-deoxy-D-xylulose-5-phosphate synthase [Artemisia annua] Length = 713 Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH NG G G G +S G G+A + Sbjct: 146 ILTGRRDQMHTIRQTNGLAGFTKRSESEHDCFGTGHSSTTISAGLGMAVGRDLKGGTNDV 205 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 206 VAIIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 241 >gi|291526045|emb|CBK91632.1| Transketolase, N-terminal subunit [Eubacterium rectale DSM 17629] Length = 279 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 7/135 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K D GDG +GQV+E+ A L N++ +++ Sbjct: 115 GSLGQGISAAVGMALSAKLTNDDYRVYTLLGDGEIQEGQVWEAAMFAGFRRLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + V + + ++ +FN + + DG D+ + +A R KG P Sbjct: 175 NNGLQIDGQVDQVCSPYPIGEKFKAFNFHVIDLKDGNDMDQIADAFKEA----RNTKGMP 230 Query: 275 IIIEMLTYRYRGHSM 289 I T + +G S Sbjct: 231 TAIIAHTVKGKGVSF 245 >gi|238924809|ref|YP_002938325.1| transketolase domain protein [Eubacterium rectale ATCC 33656] gi|238876484|gb|ACR76191.1| transketolase domain protein [Eubacterium rectale ATCC 33656] gi|291527207|emb|CBK92793.1| Transketolase, N-terminal subunit [Eubacterium rectale M104/1] Length = 279 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 7/135 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K D GDG +GQV+E+ A L N++ +++ Sbjct: 115 GSLGQGISAAVGMALSAKLTNDDYRVYTLLGDGEIQEGQVWEAAMFAGFRRLDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + V + + ++ +FN + + DG D+ + +A R KG P Sbjct: 175 NNGLQIDGPVDQVCSPYPIGEKFKAFNFHVIDLKDGNDMDQIADAFKEA----RNTKGMP 230 Query: 275 IIIEMLTYRYRGHSM 289 I T + +G S Sbjct: 231 TAIIAHTVKGKGVSF 245 >gi|168178923|ref|ZP_02613587.1| transketolase, thiamine diphosphate binding domain [Clostridium botulinum NCTC 2916] gi|182670250|gb|EDT82226.1| transketolase, thiamine diphosphate binding domain [Clostridium botulinum NCTC 2916] Length = 274 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +GQV+E+ AA + L N+ ++ Sbjct: 117 GSLGQGISTAVGMAVAGKLDEKDYRVYTLLGDGELEEGQVWEAAMAAAHYKLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N + + + + + +FN +++DG D ++ Sbjct: 177 YNGLQIDGPCNEVMSAEPIADKFRAFNWNVIEIDGHDFNSI 217 >gi|34498147|ref|NP_902362.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chromobacterium violaceum ATCC 12472] gi|41016944|sp|Q7NUK5|DXS_CHRVO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|34104002|gb|AAQ60362.1| 1-deoxy-D-xylulose 5-phosphate synthase [Chromobacterium violaceum ATCC 12472] Length = 616 Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 12/103 (11%) Query: 136 ISKGKGGSMHMFSTKNGF----------YGGHGIVGAQVSLGT--GIAFANKYRRSDKIC 183 I G+ MH NG Y G+ + S+G G+A A K D+ Sbjct: 81 ILTGRRERMHTMRQHNGLAGFPKREESEYDTFGVGHSSTSIGAALGMAVAAKTLGVDRKS 140 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA GQ +E+ N A + +++ ++ +N ++ +V Sbjct: 141 VAIIGDGAMTAGQAFEALNNAGAMDTDLLVILNDNDMSISPNV 183 >gi|311111184|ref|ZP_07712581.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus gasseri MV-22] gi|311066338|gb|EFQ46678.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus gasseri MV-22] Length = 484 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 20/147 (13%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G V+L TG+A A + + GDG+ G +E FN AA N+I Sbjct: 115 YYAVGHTSTSVALATGMARARDMMGNHENITALIGDGSLTGGLAFEGFNNAADEKHNLII 174 Query: 214 VIENNQYAMGTSV------------SRASAQTN-FSKRGVSFNIPGMQVDGMDIRAVKAT 260 V+ +NQ ++ +V S A+ N F+ G+ + G G DI+ + Sbjct: 175 VVNDNQMSIDDNVGGVVTALKKLRESNGQAEDNPFTAMGLDYKYVGQ---GNDIK----S 227 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGH 287 M A + PI++ + T + +G+ Sbjct: 228 MIDAFKAVKDIDHPIVLHINTLKGKGY 254 >gi|291520798|emb|CBK79091.1| 1-deoxy-D-xylulose-5-phosphate synthase [Coprococcus catus GD/7] Length = 624 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 14/107 (13%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GG+S G H S + F GH +S G A A + Sbjct: 82 LTGRKEDFSGLRTFGGMS---GFPKHKESPCDAFDTGHS--STSISAALGYARARDLKGE 136 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDG+ G YE+ N + N+I V+ +N+ ++ +V Sbjct: 137 DRTVVAVIGDGSLTGGMAYEALNNVSHLKSNMIIVLNDNKMSISENV 183 >gi|226944164|ref|YP_002799237.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azotobacter vinelandii DJ] gi|226719091|gb|ACO78262.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azotobacter vinelandii DJ] Length = 633 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 55/273 (20%), Positives = 102/273 (37%), Gaps = 63/273 (23%) Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAE 128 LY +G GG +G + + + T GD+++ ++ + H + G + Sbjct: 47 LYTVGQTGGHFGAGLGVIELTIALHYVFDTPGDRLVWDVGHQAYPHKILTG----RRERM 102 Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT--GIAFANKYRRSDKICVVC 186 LT RQ K G Y G+ + S+G G+A A + + + C+ Sbjct: 103 LTLRQ------KDGIAAFPRRSESPYDTFGVGHSSTSIGAALGMAIAARLKGERRRCIAV 156 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV------------SRASAQTN 234 GDGA G +E+ N A+ +++ V+ +N ++ +V SR A Sbjct: 157 IGDGALTAGMAFEALNHASDVQADMLVVLNDNDMSISKNVGGLSNYLAKILSSRTYASMR 216 Query: 235 FSKRGVSFNIPGM------------------------------QVDGMDIRAVKATMDKA 264 + + +PG +DG D+ + AT+ Sbjct: 217 EGSKNILSRLPGAWEIARRTEEYAKGMLVPGTLFEELGWNYIGPIDGHDLPTLLATLRN- 275 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSM--SDPANY 295 R KGP ++ ++T + +G + +DP Y Sbjct: 276 ---MRDLKGPQLLHVVTKKGKGFAPAEADPIGY 305 >gi|312067937|ref|XP_003136978.1| hypothetical protein LOAG_01391 [Loa loa] gi|307767852|gb|EFO27086.1| hypothetical protein LOAG_01391 [Loa loa] Length = 622 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S G+A+A KY V C GDG +G V+E+ A+ + L N++ ++ Sbjct: 117 GSLGQGLSCAAGMAYAGKYIDEASYRVYCLLGDGECAEGSVWEATAFASYYKLDNLVAIV 176 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + N+ +KR SF + VDG ++ Sbjct: 177 DMNRLGQTQQTMLGHDADTLAKRFESFGCHTVIVDGSNV 215 >gi|225571792|ref|ZP_03780666.1| hypothetical protein CLOHYLEM_07770 [Clostridium hylemonae DSM 15053] gi|225159549|gb|EEG72168.1| hypothetical protein CLOHYLEM_07770 [Clostridium hylemonae DSM 15053] Length = 163 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 14/162 (8%) Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSV 226 G+A A K D GDG +G V+E A + L N+ V++ N+ + + Sbjct: 9 VGMALAGKMNGQDYRVYTVMGDGELAEGSVWEGAMAACQYKLDNLCAVVDRNRLQISGNT 68 Query: 227 SRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYRY 284 + +R +F + V DG DI + A ++A + KG P ++ T + Sbjct: 69 EDVMGHDDLHERFGAFGWHVIDVADGNDIDQLHAAFEEA----KTVKGQPTVLIANTVKG 124 Query: 285 RGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 +G S M + AN+ + N + + Q+RK L K A+ Sbjct: 125 KGSSVMENKANWHHK------VPNEEELAQIRKDLAERKEAA 160 >gi|164604986|dbj|BAF98289.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis] Length = 711 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 18/106 (16%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A + + GDGA GQ +E+ N A Sbjct: 171 SVYDAFGAGHS--STSISAGLGMAVARDLLGKNNNVISVIGDGAMTAGQAHEAMNNAGFL 228 Query: 208 NLNVIYVIENNQY----------------AMGTSVSRASAQTNFSK 237 + N+I ++ +N+ A+ +++++ A T F K Sbjct: 229 DANLIVILNDNKQVSLPTATLDGPATPVGALSSALAKIQASTQFRK 274 >gi|222056744|ref|YP_002539106.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. FRC-32] gi|221566033|gb|ACM22005.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. FRC-32] Length = 636 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 5/96 (5%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A AN + + GDG+ G +E+ N A Sbjct: 107 SAHDAFGAGHS--STSISAGLGMAVANCLKGDPSKVIAVIGDGSLTGGMAFEALNQAGHL 164 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 N++ V+ +N+ ++ +V A + F R ++ N Sbjct: 165 RKNLVVVLNDNEMSISKNV---GALSTFISRKLTGN 197 >gi|307822372|ref|ZP_07652604.1| deoxyxylulose-5-phosphate synthase [Methylobacter tundripaludum SV96] gi|307736938|gb|EFO07783.1| deoxyxylulose-5-phosphate synthase [Methylobacter tundripaludum SV96] Length = 620 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 4/102 (3%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ ++ + K G S Y G+ +S G+A A++ + DK V Sbjct: 87 LTGRKDRMTTIRTKDGVSAFPSRAESEYDAFGVGHSSTSISAALGMAIASELKGEDKKMV 146 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GDG+ G +E+ N A + N++ ++ +N ++ V Sbjct: 147 AIIGDGSITGGMAFEAMNHAGALDANLLVILNDNDMSISPPV 188 >gi|226536911|gb|ACO72582.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Glycine max] Length = 708 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH NG G G G +S G G+A + Sbjct: 141 ILTGRRDQMHTMRQTNGLSGFTKRSESEFDCFGTGHSSTTISAGLGMAVGRDLKGRKNNV 200 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 201 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 236 >gi|225377099|ref|ZP_03754320.1| hypothetical protein ROSEINA2194_02744 [Roseburia inulinivorans DSM 16841] gi|225211004|gb|EEG93358.1| hypothetical protein ROSEINA2194_02744 [Roseburia inulinivorans DSM 16841] Length = 623 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G K G M F + + F GH +S G G A A + D Sbjct: 80 LTGRREGFDGLRKYGGMSGFPKRKESECDCFDTGHS--STSISAGLGYALAREITGEDYK 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 V GDGA G +E+ N AA N I ++ +N ++ +V S+ Sbjct: 138 VVSVIGDGALTGGMAFEALNNAARLKSNFIIILNDNNMSISENVGGLSS 186 >gi|328676063|gb|AEB28738.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella cf. novicida 3523] Length = 617 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 88/220 (40%), Gaps = 60/220 (27%) Query: 129 LTGRQGG-ISKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I+ K G + F + + F GH +S G+A A++ + Sbjct: 84 LTGRKDKLITIKKDGGISGFPKRSESEYDTFGVGHS--STSISAALGMAIADRLQGKSSN 141 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK----- 237 V GDGA G +E+ N A +++ ++ +N+ ++ +V SA +FSK Sbjct: 142 TVAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSA--HFSKIISGG 199 Query: 238 ---------RGVSFNIP--------------GM----------------QVDGMDIRAVK 258 + V NIP GM +DG D+ Sbjct: 200 FYNSIREKGKEVLKNIPPIFEFVKKIETQTKGMFVPANFFEDLGFYYVGPIDGHDV---- 255 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYR 296 + K + + HKGP ++ ++T + +G++ SDP + Sbjct: 256 TELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFH 295 >gi|209963899|ref|YP_002296814.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum centenum SW] gi|226801550|sp|B6IRB5|DXS_RHOCS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|209957365|gb|ACI98001.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum centenum SW] Length = 642 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + GG + F+ + + F GH +LG + ++ I Sbjct: 87 LTGRRDRIRTLRMGGGLSGFTKRAESEYDPFGAGHSSTSISAALGMAVGRDQLGHKNHVI 146 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 CV+ GDG+ + G YE+ N A N +I ++ +N ++ V Sbjct: 147 CVI--GDGSISAGMAYEAMNNAGAMNSRMIVILNDNDMSIAPPV 188 >gi|126643121|ref|YP_001086105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter baumannii ATCC 17978] Length = 599 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 6/103 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ I+ + K G + + + G+ +S G G++ A +Y++ D V Sbjct: 58 LTGRREQITTIRAKNGLAAFPAREESVFDTFGVGHSSTAISAGLGMSLARRYQK-DPCEV 116 Query: 185 VCF-GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 VC GDGA G +E+ N A + ++I V+ +N ++ S Sbjct: 117 VCIVGDGAMTAGMAFEAMNDAVAHDADLIVVLNDNDMSISCST 159 >gi|93005076|ref|YP_579513.1| 1-deoxy-D-xylulose-5-phosphate synthase [Psychrobacter cryohalolentis K5] gi|118595606|sp|Q1QE74|DXS_PSYCK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|92392754|gb|ABE74029.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Psychrobacter cryohalolentis K5] Length = 680 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 54/241 (22%), Positives = 92/241 (38%), Gaps = 39/241 (16%) Query: 21 VSAKRAATSSVDCVDIPF-LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 + +R T +D VD P L+ F +E L+ E + LY G G Sbjct: 34 IPRERPQTPLLDSVDSPADLKTFSSAE-------------LITLADELRLFVLYSAGQSG 80 Query: 80 GFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGR--QG 134 G +G + + + L T DQ++ ++ + H + LTGR Q Sbjct: 81 GHFGANLGVIELTIALHYLLDTPQDQIVWDVGHQAYAHKV------------LTGRRDQL 128 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAA 192 G + K G Y G+ +S G G++ A +Y+ + GDGA Sbjct: 129 GTIRSKTGLTAFPERAESVYDTFGVGHSSTSISAGLGMSLALRYQGRAQTVACIIGDGAM 188 Query: 193 NQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 G +E+ N A + +++ ++ +N ++ S+ FS+ G QVD Sbjct: 189 TGGMAFEAMNDAVQQDADLMVILNDNDMSISCSIG------GFSRHLAMLWESGYQVDIS 242 Query: 253 D 253 D Sbjct: 243 D 243 >gi|323140953|ref|ZP_08075865.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phascolarctobacterium sp. YIT 12067] gi|322414556|gb|EFY05363.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phascolarctobacterium sp. YIT 12067] Length = 630 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 2/96 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G+A A + D V GDG+ G +E+ N A + Sbjct: 109 SEHDAFGTGHS--STSISAALGMACARDLQGEDYNVVAVIGDGSMTGGMAFEALNNAGML 166 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + N+I V+ +N+ ++ +V S + G ++N Sbjct: 167 HKNMIVVLNDNEMSISKNVGAMSEYLYQLRTGETYN 202 >gi|269139929|ref|YP_003296630.1| component of the 2-oxoglutarate dehydrogenase complex,thiamin-binding protein [Edwardsiella tarda EIB202] gi|267985590|gb|ACY85419.1| component of the 2-oxoglutarate dehydrogenase complex,thiamin-binding protein [Edwardsiella tarda EIB202] gi|304559764|gb|ADM42428.1| 2-oxoglutarate dehydrogenase E1 component [Edwardsiella tarda FL6-60] Length = 935 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 11/160 (6%) Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQG 195 +GG +H+ F H + + V +G+ A ++ R+ + + GD A A QG Sbjct: 310 EGGPVHL---ALAFNPSHLEIVSPVVMGSVRARRDRLDRTRSDIVLPITIHGDAAVAGQG 366 Query: 196 QVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDG 251 V E+ N++ V + ++ NNQ TS + T + + G P V+ Sbjct: 367 IVQETLNMSQARGYEVGGTVRIVINNQIGFTTSNPLDARSTQYCTDIGKMVQAPIFHVNA 426 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 D AV A+ + K + I+++ YR GH+ +D Sbjct: 427 DDPEAVAFVTQLALDFRNCFKRDVFIDLVCYRRHGHNEAD 466 >gi|251798693|ref|YP_003013424.1| 2-oxoglutarate dehydrogenase, E1 subunit [Paenibacillus sp. JDR-2] gi|247546319|gb|ACT03338.1| 2-oxoglutarate dehydrogenase, E1 subunit [Paenibacillus sp. JDR-2] Length = 960 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 11/156 (7%) Query: 183 CVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQTNF-SK 237 ++ GD A +G V E+ N++ L + +++I NN+ T+ S S T++ S Sbjct: 364 AIIMHGDAAFPGEGIVAETMNLSQLNGYSHGGTLHIIVNNKIGF-TTESHDSRSTHYASD 422 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + IP + V+ D AV A A Y K +I+++ YR GH+ +D T Sbjct: 423 VAKGYEIPIVHVNADDPDAVIAAARMASEYRTKFKKDFLIDLIGYRKYGHNETDDPE-TT 481 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 + I + H + R+ +K +EG + E E Sbjct: 482 QPTIYKKVKAHPTV----SRVFTDKLVAEGAITEQE 513 >gi|162148782|ref|YP_001603243.1| transketolase [Gluconacetobacter diazotrophicus PAl 5] gi|161787359|emb|CAP56954.1| putative transketolase [Gluconacetobacter diazotrophicus PAl 5] Length = 250 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 1/107 (0%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G +G +G ++ G G+A + R D+ V GDG N+G V+ES AA L N Sbjct: 75 GIESSNGSLGQGLAYGMGMALGMRKRGQDRRVYVMLGDGECNEGSVWESAATAAELGLGN 134 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 + +I+ N + + + + + +F +++DG D + + Sbjct: 135 LTAIIDENGFRNDGPNTTYAGRVVLANVWRAFGWNVIEIDGHDHQVI 181 >gi|159903393|ref|YP_001550737.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus str. MIT 9211] gi|229836072|sp|A9BAC1|DXS_PROM4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|159888569|gb|ABX08783.1| 1-deoxy-D-xylulose 5-phosphate synthase [Prochlorococcus marinus str. MIT 9211] Length = 643 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 57/149 (38%), Gaps = 12/149 (8%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-L 206 ST + F GH +S G+AFA + CV GDGA G E+ N A L Sbjct: 105 STFDHFGAGHA--STSISAALGMAFARDRLGLNHKCVAVIGDGALTGGMALEAINHAGHL 162 Query: 207 WNLNVIYVIENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N + V+ +N ++ V R SA F V ++ + G +I Sbjct: 163 PNTPFLVVLNDNDMSISPPVGALSTYLNRMRHSAPVQFISDSVQESVKNLPFIGGEIPPE 222 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ++ +V K + E L + Y G Sbjct: 223 IKSLTGSVKRLAVPKVGAVFEELGFTYMG 251 >gi|326317941|ref|YP_004235613.1| deoxyxylulose-5-phosphate synthase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374777|gb|ADX47046.1| deoxyxylulose-5-phosphate synthase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 622 Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 33/63 (52%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G+A A + R D+ V GDGA G +E+ N A + + +++ ++ +N ++ Sbjct: 125 ISAALGMALAARQRGEDRRAVAIIGDGAMTAGMAFEALNNAGVADADLLVILNDNDMSIS 184 Query: 224 TSV 226 V Sbjct: 185 PPV 187 >gi|225013102|ref|ZP_03703516.1| deoxyxylulose-5-phosphate synthase [Flavobacteria bacterium MS024-2A] gi|225002760|gb|EEG40742.1| deoxyxylulose-5-phosphate synthase [Flavobacteria bacterium MS024-2A] Length = 591 Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust. Identities = 48/225 (21%), Positives = 90/225 (40%), Gaps = 39/225 (17%) Query: 100 TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 T D +I ++ +GH + G K +QGGIS G S + F GH Sbjct: 64 TPKDVLIWDVGHQAYGHKMLTG---RKTAFSTLRQQGGIS---GFPKREESPYDTFGTGH 117 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G +S G+A ++ + +K + GD + G +E+ N NV+ ++ + Sbjct: 118 A--GTAISAALGMALSSSLKGENKQHIAVVGDASIANGMAFEALNHLGTTLANVLVILND 175 Query: 218 NQYAMGTSV------------SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 N + SV R + F ++++ P +DG +I + ++ Sbjct: 176 NTMGIDPSVGALKNYFETVKNERPATPNFFESLNLNYSGP---IDGHNIDTLLQVFEQQ- 231 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDP 310 + +GP II ++T + +G +++ NE + H P Sbjct: 232 ---KNIQGPRIIHLVTTKGKGLPIAE----------NEQVTYHAP 263 >gi|239617383|ref|YP_002940705.1| Transketolase domain protein [Kosmotoga olearia TBF 19.5.1] gi|239506214|gb|ACR79701.1| Transketolase domain protein [Kosmotoga olearia TBF 19.5.1] Length = 284 Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 13/175 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A K V GDG +GQV+E+ L N+I ++ Sbjct: 119 GSLGQGISMGIGVALGFKMDGKSNYVYVVLGDGECQEGQVWEAALYGGNAKLDNLIVFVD 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N+ + + + + ++ F +VDG ++ + + KA + KG Sbjct: 179 YNKQQLDGYIDDINPLGDLREKWEVFGWHSQEVDGHNVAEIYDAIQKA----KKTKGKSS 234 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEIN-EMRSNHDPIEQVRKRLLHNKWASEGDL 329 +I + T + +G S ++ E+N M+ + IEQ K L E DL Sbjct: 235 VIILHTIKGKGCSFAEGI------ELNHHMKFTEEQIEQAIKPLEEELRRKERDL 283 >gi|121595781|ref|YP_987677.1| hypothetical protein Ajs_3488 [Acidovorax sp. JS42] gi|120607861|gb|ABM43601.1| thiamine pyrophosphate enzyme domain protein TPP-binding protein [Acidovorax sp. JS42] Length = 555 Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 65/158 (41%), Gaps = 35/158 (22%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 G H T G G G+ A +G IA N+ + GDG A Sbjct: 378 GCPRHDLITLTGGAIGQGLPNA---VGAAIACPNRP------VIALIGDGTA-------M 421 Query: 201 FNIAALW-----NLNVIYVIENN-QYAM--------GTSVSRASAQTNFSKRGVSFNIPG 246 + + ALW NL+V+ VI NN Y++ G + A++ +G N Sbjct: 422 YTLQALWSMARENLHVVSVIFNNASYSVLNVELERVGAEQAGPKAKSQLDLKGPVLNFAQ 481 Query: 247 MQVDGMDIRAVKATMD----KAVAYCRAHKGPIIIEML 280 + GM + AV+A+ +A+ Y AH GP +IE L Sbjct: 482 L-AQGMGVHAVRASTAEDFCQALEYALAHPGPHLIEAL 518 >gi|312134379|ref|YP_004001717.1| transketolase domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311774430|gb|ADQ03917.1| Transketolase domain-containing protein [Caldicellulosiruptor owensensis OL] Length = 282 Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust. Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A A K + + V GDG +G V+E+ AA + L N++ +I+ Sbjct: 113 GSLGHGLSVGAGMALAGKRKGKNYRVFVLMGDGELAEGSVWEAAMFAANYKLDNLVAIID 172 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 N+ + ++ +F ++DG Sbjct: 173 RNKLQISGGTEEVMKLEPLRQKWEAFGWKVFELDG 207 >gi|261407823|ref|YP_003244064.1| 2-oxoglutarate dehydrogenase, E1 subunit [Paenibacillus sp. Y412MC10] gi|261284286|gb|ACX66257.1| 2-oxoglutarate dehydrogenase, E1 subunit [Paenibacillus sp. Y412MC10] Length = 958 Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 7/177 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A +G V E+ N L I++I NN+ T + + S Sbjct: 360 LSIQIHGDSAFPGEGIVPETLNFNKLPAFRTGGSIHIIVNNRIGFTTEGKDSRSTHYASD 419 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 + IP + V+ D A A A Y K I+I+++ YR GH+ +D T Sbjct: 420 LAKGYEIPIIHVNADDPEACIAVARLASDYRNKFKKSILIDLVGYRKYGHNETDDPE-TT 478 Query: 298 REEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 + I + NH + + K+L+ ++ + ++ V +++ NS E ++ K+P Sbjct: 479 QPLIYQKVKNHPTVSAIYMKKLVDGNILTQEQVDGLKNGVVEVLKNSYENVKT-KDP 534 >gi|281414220|ref|ZP_06245962.1| alpha-ketoglutarate decarboxylase [Micrococcus luteus NCTC 2665] Length = 1217 Score = 39.7 bits (91), Expect = 0.74, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 12/174 (6%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG V E ++ L + I+V+ NNQ T ++A + + Sbjct: 642 ILVHGDAAFAGQGVVAEVLQLSQLPGYHTGGTIHVVVNNQVGFTTPPTQARSTVYSTDVA 701 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSDPA 293 + V+G + +V A Y + ++I+++ YR RGH SM+ P Sbjct: 702 KTIQAAIFHVNGDEPESVVHVAQLAFEYRQRFNKDVVIDLVCYRRRGHNEGDDPSMTQPR 761 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 Y E+ R + +E + R + ++ LK+ + + ++ + E A Sbjct: 762 MYNLIEQKRSTRKLY--VESLVGRGDITQEEADSALKDYQQQLERVFAETHEDA 813 >gi|239917300|ref|YP_002956858.1| 2-oxoglutarate dehydrogenase E1 component [Micrococcus luteus NCTC 2665] gi|239838507|gb|ACS30304.1| 2-oxoglutarate dehydrogenase E1 component [Micrococcus luteus NCTC 2665] Length = 1236 Score = 39.7 bits (91), Expect = 0.74, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 12/174 (6%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRG 239 ++ GD A A QG V E ++ L + I+V+ NNQ T ++A + + Sbjct: 661 ILVHGDAAFAGQGVVAEVLQLSQLPGYHTGGTIHVVVNNQVGFTTPPTQARSTVYSTDVA 720 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSDPA 293 + V+G + +V A Y + ++I+++ YR RGH SM+ P Sbjct: 721 KTIQAAIFHVNGDEPESVVHVAQLAFEYRQRFNKDVVIDLVCYRRRGHNEGDDPSMTQPR 780 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 Y E+ R + +E + R + ++ LK+ + + ++ + E A Sbjct: 781 MYNLIEQKRSTRKLY--VESLVGRGDITQEEADSALKDYQQQLERVFAETHEDA 832 >gi|254167474|ref|ZP_04874326.1| Transketolase, thiamine diphosphate binding domain, putative [Aciduliprofundum boonei T469] gi|197623737|gb|EDY36300.1| Transketolase, thiamine diphosphate binding domain, putative [Aciduliprofundum boonei T469] Length = 256 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 17/171 (9%) Query: 147 FSTKNGFYGGH------------GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 F N F GH G +G +S G+A A K D GDG + Sbjct: 72 FRKVNSFLQGHPSLMVPGVDMCTGSLGQGLSAAIGMALAAKLDNKDYRVYALLGDGEIEE 131 Query: 195 GQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 G ++E+ AA L N+I +++ N+ + ++ +F + ++G D Sbjct: 132 GNIWEAAMTAATRKLDNLIAIVDRNKIQLDDFTDTMVVLDPLEEKWNAFGWRVLSINGHD 191 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYRTREEINE 303 + + +++A + P +I T + +G S M + A Y + +E Sbjct: 192 VVQIIRALEEA---KKTQGKPTVIIAHTVKGKGVSYMENTAKYHGKPPQSE 239 >gi|58426261|gb|AAW75298.1| oxoglutarate dehydrogenase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 990 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ V ++++ NNQ TS +R A++ Sbjct: 396 RKTVLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVINNQIGFTTS-TRDDARS 454 Query: 234 NFSKRGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V+ I P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 455 TLYCTDVAKMIGAPVFHVNGDDPDAVIFVSKLAYEFRQQFKKDVVIDLVCYRRWGHNEAD 514 Query: 292 ------PANYRT 297 P Y+T Sbjct: 515 EPAATQPVMYQT 526 >gi|83591394|ref|YP_425146.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC 11170] gi|118595483|sp|Q2RYD6|DXS1_RHORT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName: Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP synthase 1; Short=DXPS 1 gi|83574308|gb|ABC20859.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC 11170] Length = 645 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 13/169 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +GG + F+ + + F GH +S G G+A + + Sbjct: 87 LTGRRDRIRTLRQGGGLSGFTLREESPYDPFGAGHS--STSISAGLGMAIGSALAGDARD 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN---FSKRG 239 V GDG+ + G YE+ N A +I ++ +N ++ V SA + SK Sbjct: 145 VVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDNDMSIAPPVGAMSAYLSRLLSSKSW 204 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRA--HKGPIIIEMLTYRYRG 286 +S ++ A++ T +A Y R G + E L + Y G Sbjct: 205 LSIRTLAKEIVARLPDALERTAKRAEEYARGMVTGGGTLFEELGFYYVG 253 >gi|109947511|ref|YP_664739.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter acinonychis str. Sheeba] gi|109714732|emb|CAJ99740.1| 1-deoxyxylulose-5-phosphate synthase [Helicobacter acinonychis str. Sheeba] Length = 616 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 81/194 (41%), Gaps = 18/194 (9%) Query: 79 GGFCHLCIGQEAVIVGMKMSLT-EGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IVGM + + I T+++ + H L G ++ + + G G Sbjct: 35 GGHLSSSLGAVELIVGMHALFDCQKNPFIFDTSHQAYAHKLLTGRFESFSTLRQFKGLSG 94 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH VS+G G+A A + ++ + + GDG+ + Sbjct: 95 FTKPSE-------SAYDYFIAGHS--STSVSVGVGVAKAFRLKQELGMPIALLGDGSISA 145 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G YE+ N +I ++ +N+ ++ T + S + +G P Q + Sbjct: 146 GIFYEALNELGDRKYPMIMILNDNEMSISTPIGALSKALSQLMKG-----PFYQSFRSKV 200 Query: 255 RAVKATMDKAVAYC 268 + + T+ ++V Y Sbjct: 201 KKILNTLPESVNYL 214 >gi|150019679|ref|YP_001311933.1| transketolase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149906144|gb|ABR36977.1| Transketolase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 273 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + D GDG +GQV+E+ AA + L N+ I+ Sbjct: 116 GSLGQGISAAVGMALAGKLDKKDYRVYAILGDGELEEGQVWEASMSAAHYKLDNLTAFID 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + ++ K+ +F + ++G D + A+A + KG P Sbjct: 176 NNGLQIDGNIEDVMNPGPIDKKFEAFGWNVLTINGHDYDEII----NAIAKAKEVKGKPT 231 Query: 276 IIEMLTYRYRGHSM 289 I T + +G S Sbjct: 232 AIICNTVKGKGVSF 245 >gi|53728900|ref|ZP_00134615.2| COG1154: Deoxyxylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207695|ref|YP_001052920.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae L20] gi|165975663|ref|YP_001651256.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190149479|ref|YP_001968004.1| 1-deoxy-D-xylulose-5-phosphate synthase (DXPS) [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252030|ref|ZP_07338201.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307245020|ref|ZP_07527117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247194|ref|ZP_07529245.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307253973|ref|ZP_07535825.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258428|ref|ZP_07540169.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262798|ref|ZP_07544425.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|166198593|sp|A3MYS9|DXS_ACTP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|229807523|sp|B3H050|DXS_ACTP7 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|229807524|sp|B0BSL0|DXS_ACTPJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|126096487|gb|ABN73315.1| 1-deoxy-D-xylulose-5-phosphate synthase (DXPS) [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165875764|gb|ABY68812.1| 1-deoxyxylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189914610|gb|ACE60862.1| 1-deoxy-D-xylulose-5-phosphate synthase (DXPS) [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649460|gb|EFL79645.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854185|gb|EFM86393.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306856332|gb|EFM88484.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306863177|gb|EFM95119.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867612|gb|EFM99459.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306871943|gb|EFN03660.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 617 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 16/105 (15%) Query: 136 ISKGKGGSMHMFSTKNGFYG--------------GHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH KNG + GH +S G GIA A + + + Sbjct: 84 ILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHS--STSISAGVGIAVAAEKENAGR 141 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 142 KTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSISENV 186 >gi|329851865|ref|ZP_08266546.1| 1-deoxy-D-xylulose-5-phosphate synthase [Asticcacaulis biprosthecum C19] gi|328839714|gb|EGF89287.1| 1-deoxy-D-xylulose-5-phosphate synthase [Asticcacaulis biprosthecum C19] Length = 639 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAF--ANKYRRSDKICV 184 LTGR+ I S +GG + F+ ++ Y G A S+ + F A + D + Sbjct: 85 LTGRRDRIRSLRQGGGLSGFTKRSESPYDPFGAAHAATSISAALGFCAARDQKGEDHKVI 144 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 GDG+ + G YE+ N AA N+ ++ +N ++ V SA Sbjct: 145 AVIGDGSMSAGMAYEAMNNAAETTRNLTVILNDNDMSIAPPVGGMSA 191 >gi|221632587|ref|YP_002521808.1| 2-oxoglutarate dehydrogenase E1 component [Thermomicrobium roseum DSM 5159] gi|221155817|gb|ACM04944.1| 2-oxoglutarate dehydrogenase, E1 component [Thermomicrobium roseum DSM 5159] Length = 965 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 4/118 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A +G V E+ N++ + +++I NNQ T + S Sbjct: 375 LPILIHGDAAFPGEGIVAETLNMSGIPGYATGGTLHIIVNNQLGYTTEPQEGRSTFYASD 434 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 F IP + V+ D A A AY + ++I+++ YR GH+ D + Sbjct: 435 PARGFEIPVIHVNADDPEACLTAARLAFAYRQRFHKDVLIDLIGYRRWGHNEGDEPTF 492 >gi|46488696|gb|AAS99588.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Elaeis guineensis] Length = 707 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +LG + K R+++ I V+ GDGA GQ YE+ N A Sbjct: 166 SEYDSFGAGHSSTSISAALGMAVGRDLKGRKNNVIAVI--GDGAMTAGQAYEAMNNAGYL 223 Query: 208 NLNVIYVIENNQ 219 + ++I ++ +N+ Sbjct: 224 DSDMIVILNDNK 235 >gi|307637042|gb|ADN79492.1| 1-deoxy-D-xylulose 5-phosphate synthase [Helicobacter pylori 908] gi|325995634|gb|ADZ51039.1| 1-deoxy-D-xylulose 5-phosphate synthase [Helicobacter pylori 2018] gi|325997230|gb|ADZ49438.1| 1-deoxy-D-xylulose 5-phosphate synthase [Helicobacter pylori 2017] Length = 616 Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 16/161 (9%) Query: 79 GGFCHLCIGQEAVIVGMKMSLT-EGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IVGM + + I T+++ + H L G ++ + + G G Sbjct: 35 GGHLSSSLGAVELIVGMHALFDCQKNPFIFDTSHQAYAHKLLTGRFESFSTLRQFKGLSG 94 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH VS+G G+A A + +++ + + GDG+ + Sbjct: 95 FTKPSE-------SAYDYFIAGHS--STSVSIGVGVAKAFRLKQTLGMPIALLGDGSISA 145 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSV---SRASAQ 232 G YE+ N +I ++ +N+ ++ T + S+A +Q Sbjct: 146 GIFYEALNELGDRKYPMIMILNDNEMSISTPIGALSKALSQ 186 >gi|238917014|ref|YP_002930531.1| 1-deoxy-D-xylulose-5-phosphate synthase [Eubacterium eligens ATCC 27750] gi|238872374|gb|ACR72084.1| 1-deoxy-D-xylulose-5-phosphate synthase [Eubacterium eligens ATCC 27750] Length = 629 Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTKN-----GFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ + K G M F +N F GH +S G G+ A + Sbjct: 80 LTGRKNQFDQLRKFGGMSGFPKRNESHFDAFDTGHS--STSISAGLGLVKARDLKNEHYN 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G YE+ N A+ N I V+ +N ++ +V Sbjct: 138 VVSVIGDGALTGGMAYEALNNASSLKTNFIIVLNDNTMSIAKNV 181 >gi|222475008|ref|YP_002563423.1| 2-oxoglutarate dehydrogenase E1 component (sucA) [Anaplasma marginale str. Florida] gi|222419144|gb|ACM49167.1| 2-oxoglutarate dehydrogenase E1 component (sucA) [Anaplasma marginale str. Florida] Length = 930 Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust. Identities = 40/182 (21%), Positives = 86/182 (47%), Gaps = 12/182 (6%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQ 232 +R + ++ G+ A QG V E F ++ + + +++V+ NNQ +G + S+ Sbjct: 341 KRQPVLGILVHGNAAFIGQGVVSEGFTLSGVAGYSPGGIVHVVVNNQ--VGFTADPESSM 398 Query: 233 TNFSKRGVS--FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 T+F V+ + P V+G D +V D A+ Y ++++++ YR GH+ Sbjct: 399 TSFYCSDVAKMIDAPVFHVNGDDPESVLLVADLAMEYRSKFGKDVVVDIVCYRRFGHNEG 458 Query: 291 DPANYRTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + T+ + + + H + + +RL+ ++ D+ + R ++ + FA+S Sbjct: 459 DEPMF-TQPLMYKRIAAHKTVASLYAERLISEGVVTKEDVDKSRGEFRAVLEEA--FAES 515 Query: 350 DK 351 K Sbjct: 516 AK 517 >gi|166157044|emb|CAO79501.1| putative transketolase N-terminal section (TK) [uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11] Length = 282 Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 1/107 (0%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G +S GIA A K D GDG N+GQ++ES A L N Sbjct: 119 GIENTSGSLGQGLSQAIGIAIAAKMDDLDYRIYCMTGDGELNEGQIWESAMFAPNKKLNN 178 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 + ++I+ N N + SFN ++++G I + Sbjct: 179 ITWIIDRNNIQSDGKTEDVMPLENLKDKLESFNWFVIEINGHSIEEI 225 >gi|114563514|ref|YP_751027.1| alpha-ketoglutarate decarboxylase [Shewanella frigidimarina NCIMB 400] gi|114334807|gb|ABI72189.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella frigidimarina NCIMB 400] Length = 940 Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 5/113 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKR 238 + GD A QG V E+FN++ + I ++ NNQ TS + T + + Sbjct: 359 ITIHGDSAITGQGIVQETFNMSQTRGFTIGGSIRIVVNNQVGFTTSNQADTRSTEYCTDI 418 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV AV Y K ++I+++ YR GH+ +D Sbjct: 419 AKMVQAPIFHVNSDDPEAVAFISQLAVDYRNEFKRDVVIDLVCYRRHGHNEAD 471 >gi|331084736|ref|ZP_08333824.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410830|gb|EGG90252.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 624 Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G K G M F + + F GH +S G G A + D Sbjct: 80 LTGRKAGFDDLRKYGGMSGFPKRKESECDAFDTGHS--STSISAGLGYVEAREILGQDHK 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + GDGA G YE+ N AA N I V+ +N ++ +V Sbjct: 138 VISVIGDGAMTGGMAYEALNNAAGLKSNFIIVLNDNNMSISENV 181 >gi|322515003|ref|ZP_08068013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus ureae ATCC 25976] gi|322118992|gb|EFX91164.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus ureae ATCC 25976] Length = 626 Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 16/105 (15%) Query: 136 ISKGKGGSMHMFSTKNGFYG--------------GHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH KNG + GH +S G GIA A + + + Sbjct: 93 ILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHS--STSISAGVGIAVAAEKENAGR 150 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 151 KTVCVIGDGAITAGMAFEAMNHAGAMHTDMLVILNDNEMSISENV 195 >gi|255004113|ref|ZP_05278914.1| 2-oxoglutarate dehydrogenase E1 component [Anaplasma marginale str. Virginia] Length = 904 Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust. Identities = 40/182 (21%), Positives = 86/182 (47%), Gaps = 12/182 (6%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQ 232 +R + ++ G+ A QG V E F ++ + + +++V+ NNQ +G + S+ Sbjct: 315 KRQPVLGILVHGNAAFIGQGVVSEGFTLSGVAGYSPGGIVHVVVNNQ--VGFTADPESSM 372 Query: 233 TNFSKRGVS--FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 T+F V+ + P V+G D +V D A+ Y ++++++ YR GH+ Sbjct: 373 TSFYCSDVAKMIDAPVFHVNGDDPESVLLVADLAMEYRSKFGKDVVVDIVCYRRFGHNEG 432 Query: 291 DPANYRTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + T+ + + + H + + +RL+ ++ D+ + R ++ + FA+S Sbjct: 433 DEPMF-TQPLMYKRIAAHKTVASLYAERLISEGVVTKEDVDKSRGEFRAVLEEA--FAES 489 Query: 350 DK 351 K Sbjct: 490 AK 491 >gi|225420248|ref|ZP_03762551.1| hypothetical protein CLOSTASPAR_06591 [Clostridium asparagiforme DSM 15981] gi|225041065|gb|EEG51311.1| hypothetical protein CLOSTASPAR_06591 [Clostridium asparagiforme DSM 15981] Length = 272 Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 1/110 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G SL G+A A K+ +++ GDG +G V+E+ AA + L N+ ++++ Sbjct: 118 GSLGQGASLAMGLALAAKHAKAEYKVYAVLGDGECQEGLVWEAAMAAAHYKLDNLTFMLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 N+ + S + N K+ +F +VDG D+ A+ A + V+ Sbjct: 178 YNKLQIDGSNDEVMSLGNIVKKFDAFGFECFEVDGHDMDAIVAALKAPVS 227 >gi|83312003|ref|YP_422267.1| 1-deoxy-D-xylulose-5-phosphate synthase [Magnetospirillum magneticum AMB-1] gi|118595587|sp|Q2W367|DXS_MAGMM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|82946844|dbj|BAE51708.1| Deoxyxylulose-5-phosphate synthase [Magnetospirillum magneticum AMB-1] Length = 644 Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust. Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 7/100 (7%) Query: 140 KGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 +GG + F+ + + F GH +S G+A A + + + GDGA + Sbjct: 104 QGGGLSGFTRRSESEYDPFGAGHS--STSISAALGMAVARDLKGATNNVIAVIGDGAMSA 161 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 GQ YE+ N A +I ++ +N ++ V SA + Sbjct: 162 GQAYEAMNNAGAAGSRLIVILNDNDMSIAPPVGALSAHLS 201 >gi|303250727|ref|ZP_07336923.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251739|ref|ZP_07533643.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650397|gb|EFL80557.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860825|gb|EFM92834.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 617 Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 16/105 (15%) Query: 136 ISKGKGGSMHMFSTKNGFYG--------------GHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH KNG + GH +S G GIA A + + + Sbjct: 84 ILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHS--STSISAGVGIAVAAEKENAGR 141 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 142 KTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSISENV 186 >gi|302391077|ref|YP_003826897.1| transketolase subunit A [Acetohalobium arabaticum DSM 5501] gi|302203154|gb|ADL11832.1| transketolase subunit A [Acetohalobium arabaticum DSM 5501] Length = 270 Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 7/142 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + D GDG +GQ++E+ AA + L N+I + Sbjct: 116 GSLGQGLSAAVGMALAGKLDQKDYRVFAMVGDGEIQEGQIWEAAMSAANYKLDNLIAFTD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR-AHKGPI 275 NQ + + + + + +F +++DG ++ + +A+A R P+ Sbjct: 176 YNQVQLIDKTEKVMNVHSVTDKFEAFGWYTIEIDGHELTEIL----EALAEAREVTDKPV 231 Query: 276 IIEMLTYRYRGHS-MSDPANYR 296 +I T + +G S M D A + Sbjct: 232 MIVANTVKGKGVSFMEDKAAWH 253 >gi|293395155|ref|ZP_06639441.1| transketolase [Serratia odorifera DSM 4582] gi|291422332|gb|EFE95575.1| transketolase [Serratia odorifera DSM 4582] Length = 279 Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 6/131 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G VS+ G+A +++ GDG N+GQ +E+F A NL N+ I+ Sbjct: 118 GSLGQGVSIAAGMALSHQLGGRRNRVFSILGDGELNEGQCWEAFQFIAHHNLNNLTLFID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR-AHKGPI 275 N+ + + + + + +F V G DI A+ A AVA R + P+ Sbjct: 178 YNKQQLDGLLDEVIKPFDLAGKFRAFGFEVATVKGDDINAICA----AVAPVRNGEQRPL 233 Query: 276 IIEMLTYRYRG 286 ++ + + + +G Sbjct: 234 VVILDSIKGQG 244 >gi|33151663|ref|NP_873016.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus ducreyi 35000HP] gi|41016951|sp|Q7VNP7|DXS_HAEDU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|33147884|gb|AAP95405.1| 1-deoxyxylulose-5-phosphate synthase [Haemophilus ducreyi 35000HP] Length = 617 Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 16/105 (15%) Query: 136 ISKGKGGSMHMFSTKNGFYG--------------GHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH KNG + GH +S G GIA A + + + Sbjct: 84 ILTGRRDQMHTIRQKNGIHPFPWREESPYDVLSVGHS--STSISAGLGIAVAAQKENAGR 141 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 142 KTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSISENV 186 >gi|108562774|ref|YP_627090.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori HPAG1] gi|118595585|sp|Q1CUF6|DXS_HELPH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|107836547|gb|ABF84416.1| 1-deoxyxylulose-5-phosphate synthase [Helicobacter pylori HPAG1] Length = 618 Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 82/194 (42%), Gaps = 18/194 (9%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IVGM + + I T+++ + H L G ++ + + G G Sbjct: 37 GGHLSSSLGAVELIVGMHALFDCQKNPFIFDTSHQAYAHKLLTGRFESFSTLRQFKGLSG 96 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH VS+G G+A A +++ + + GDG+ + Sbjct: 97 FTKPSE-------SAYDYFIAGHS--STSVSIGVGVAKAFCLKQALGMPIALLGDGSISA 147 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G YE+ N +I ++ +N+ ++ T + S + +G P Q + Sbjct: 148 GIFYEALNELGDRKYPMIMILNDNEMSISTPIGALSKALSQLMKG-----PFYQSFRSKV 202 Query: 255 RAVKATMDKAVAYC 268 + + +T+ ++V Y Sbjct: 203 KKILSTLPESVNYL 216 >gi|299537138|ref|ZP_07050441.1| 2-oxoglutarate dehydrogenase E1 component [Lysinibacillus fusiformis ZC1] gi|298727379|gb|EFI67951.1| 2-oxoglutarate dehydrogenase E1 component [Lysinibacillus fusiformis ZC1] Length = 941 Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 9/142 (6%) Query: 176 YRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV--SRA 229 + R+ + ++ GD A QG V E N A I++I NN T SR+ Sbjct: 346 FDRTKGLGILVHGDAAFPGQGIVTEVLNFAKTEGFTTGGTIHIIANNMIGFTTEHYDSRS 405 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 S ++ +G + +P + V+ AV A Y + II++++ YR GH+ Sbjct: 406 SVYSSDPAKG--YEVPVIHVNADSPEAVVQVGRFAANYRQTFGKDIIVDLVGYRRHGHNE 463 Query: 290 SDPANYRTREEINEMRSNHDPI 311 +D T E ++ S H+ + Sbjct: 464 TDDPTV-TNPETYKLVSKHETV 484 >gi|317047772|ref|YP_004115420.1| transketolase domain-containing protein [Pantoea sp. At-9b] gi|316949389|gb|ADU68864.1| Transketolase domain protein [Pantoea sp. At-9b] Length = 276 Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K S+++ V GDG +G +E+ +AA + L N++ + + Sbjct: 121 GALGHGLPVAVGIALAAKKDGSNRMVYVVTGDGELAEGSNWEAALVAAHYGLDNLVIIND 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N+ + ++ +F + + G D+ AV AT++ Sbjct: 181 KNKLQLAGHTRDIMNTDPLPEKWRAFGLDVTECHGNDMAAVVATLE 226 >gi|307941538|ref|ZP_07656893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseibium sp. TrichSKD4] gi|307775146|gb|EFO34352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseibium sp. TrichSKD4] Length = 639 Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 33/68 (48%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A + D + GDGA + G YE+ N A + +I ++ +N ++ Sbjct: 126 ISAGLGMAVARDLKGGDNNVIAVIGDGAMSAGMAYEAMNNAGSLDSRLIVILNDNDMSIA 185 Query: 224 TSVSRASA 231 V SA Sbjct: 186 PPVGAMSA 193 >gi|307249421|ref|ZP_07531412.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858563|gb|EFM90628.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 617 Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 16/105 (15%) Query: 136 ISKGKGGSMHMFSTKNGFYG--------------GHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH KNG + GH +S G GIA A + + + Sbjct: 84 ILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHS--STSISAGVGIAVAAEKENAGR 141 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 142 KTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSISENV 186 >gi|148253965|ref|YP_001238550.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. BTAi1] gi|259645379|sp|A5EEQ0|DXS_BRASB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|146406138|gb|ABQ34644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. BTAi1] Length = 641 Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + GG + F+ + + F H +S G G+A A Sbjct: 87 LTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHS--STSISAGLGMAVARDLSGGKNN 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDGA + G YE+ N A N +I ++ +N ++ V SA Sbjct: 145 VIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSA 193 >gi|317125599|ref|YP_004099711.1| 2-oxoglutarate dehydrogenase E1 component [Intrasporangium calvum DSM 43043] gi|315589687|gb|ADU48984.1| 2-oxoglutarate dehydrogenase E1 component [Intrasporangium calvum DSM 43043] Length = 1295 Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 10/134 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N++ L I+V+ NNQ TS S + + + Sbjct: 692 LPVLLHGDAAFAGQGVVAETLNLSQLRGYRTGGTIHVVINNQVGFTTSPSSSRSSVYSTD 751 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A + A + + ++++M+ YR RGH SM+ Sbjct: 752 VARMIQAPIFHVNGDDPEACVRVAELAYEFRQEFNKDVVVDMVCYRRRGHNEGDDPSMTQ 811 Query: 292 PANYRTREEINEMR 305 P Y E +R Sbjct: 812 PLMYNLIEAKRSVR 825 >gi|90580054|ref|ZP_01235862.1| putative 2-oxoglutarate dehydrogenase, E1 component [Vibrio angustum S14] gi|90438939|gb|EAS64122.1| putative 2-oxoglutarate dehydrogenase, E1 component [Vibrio angustum S14] Length = 943 Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V I ++ NNQ TS + T Sbjct: 350 SKVLPITLHGDSAIAGQGVVAETFNMSQARGYGVGGTIRIVVNNQVGFTTSNPNDTRSTE 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A + K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQSPIFHVNADDPEAVAFVTRLAFDFRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|307260666|ref|ZP_07542358.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869743|gb|EFN01528.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 639 Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 16/105 (15%) Query: 136 ISKGKGGSMHMFSTKNGFYG--------------GHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH KNG + GH +S G GIA A + + + Sbjct: 84 ILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHS--STSISAGVGIAVAAEKENAGR 141 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 142 KTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSISENV 186 >gi|307256234|ref|ZP_07538021.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865415|gb|EFM97311.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 617 Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 16/105 (15%) Query: 136 ISKGKGGSMHMFSTKNGFYG--------------GHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH KNG + GH +S G GIA A + + + Sbjct: 84 ILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHS--STSISAGVGIAVAAEKENAGR 141 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 142 KTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSISENV 186 >gi|295098065|emb|CBK87155.1| transketolase subunit A [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 276 Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 16/165 (9%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K R + C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLAGRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA---VKATMDKAVAYCRA- 270 ++ N+ + + + + + +F + V G DI A V A + +A A R Sbjct: 173 VDWNKQQLDGELDEIISAFDLEGKFRAFGFDVVTVKGDDIPALLEVTAPIPEADARPRVV 232 Query: 271 ------HKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHD 309 +G +E L+ + +++ + E I ++ ++HD Sbjct: 233 ILDSIKGQGVPYLEQLSNSHH-LRLTEESKAALNETIRQLEASHD 276 >gi|310822664|ref|YP_003955022.1| 1-deoxy-d-xylulose-5-phosphate synthase [Stigmatella aurantiaca DW4/3-1] gi|309395736|gb|ADO73195.1| 1-deoxy-D-xylulose-5-phosphate synthase [Stigmatella aurantiaca DW4/3-1] Length = 582 Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 13/156 (8%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + GH VS G G+ + V GDGA G +E N A Sbjct: 107 SPLDALAAGHSCT--AVSAGLGMLEGKRRMGKPGHVVAVLGDGALTGGLSFEGLNNAGGS 164 Query: 208 NLNVIYVIENNQYAMGTSVSRASA--QTNFSK---RGVSFNIPGMQVDGMDIRAVKATMD 262 +L ++ ++ +NQ ++ +V A +T ++ G+ F G +DG D+ A+ + Sbjct: 165 HLPLVVLLNDNQMSISANVGAIPALLRTREARAFFEGLGFTYLG-PLDGHDLGALLKALR 223 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 +A R P+++ +T + RG ++ A+ +TR Sbjct: 224 EAKHSSR----PVVVHAMTQKGRGFPPAE-ADTQTR 254 >gi|254779045|ref|YP_003057150.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori B38] gi|254000956|emb|CAX28900.1| 1-deoxy-D-xylulose-5-phosphate synthase (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) [Helicobacter pylori B38] Length = 618 Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 82/194 (42%), Gaps = 18/194 (9%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IVGM + + I T+++ + H L G ++ + + G G Sbjct: 37 GGHLSSSLGAVELIVGMHALFDCQKNPFIFDTSHQAYAHKLLTGRFESFSTLRQFKGLSG 96 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH VS+G G+A A +++ + + GDG+ + Sbjct: 97 FTKPSE-------SVYDYFIAGHS--STSVSIGVGVAKAFCLKQALGMPIALLGDGSISA 147 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G YE+ N +I ++ +N+ ++ T + S + +G P Q + Sbjct: 148 GIFYEALNELGDRKYPMIMILNDNEMSISTPIGALSKALSQLMKG-----PFYQSFRSKV 202 Query: 255 RAVKATMDKAVAYC 268 + + +T+ ++V Y Sbjct: 203 KKILSTLPESVNYL 216 >gi|221195087|ref|ZP_03568143.1| transketolase [Atopobium rimae ATCC 49626] gi|221184990|gb|EEE17381.1| transketolase [Atopobium rimae ATCC 49626] Length = 274 Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 7/135 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G VS G+A A K GDG +GQV+E+ A L N+ +I+ Sbjct: 115 GSLGQGVSTAVGMALAAKKFGDTYRTYALLGDGEIEEGQVWEAAMFAGNHELDNLTLIID 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + + + ++ ++ +F ++V DG D ++A +A R KG P Sbjct: 175 NNGLQLDGPLEQINSPVPIGEKFRAFKFHVIEVADGSDFDQLRAAFSEA----RTVKGHP 230 Query: 275 IIIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 231 TVIVAHTIKGKGVSF 245 >gi|152977857|ref|YP_001343486.1| transketolase domain-containing protein [Actinobacillus succinogenes 130Z] gi|150839580|gb|ABR73551.1| Transketolase domain protein [Actinobacillus succinogenes 130Z] Length = 276 Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 1/115 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K S + V GDG +G +E+ AA + L N+I + + Sbjct: 121 GALGHGLPVAVGLAIAAKKSGSKRKIYVLTGDGELGEGSNWEAALTAAQYKLDNLIIIND 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 N+ + K+ +F + + G DIR+V T++ + H Sbjct: 181 KNKLQLAGFTKDILCTDPLDKKWEAFGMEVHECQGNDIRSVVDTLESIQPNGKPH 235 >gi|253998308|ref|YP_003050371.1| deoxyxylulose-5-phosphate synthase [Methylovorus sp. SIP3-4] gi|253984987|gb|ACT49844.1| deoxyxylulose-5-phosphate synthase [Methylovorus sp. SIP3-4] Length = 613 Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G++ + G S + F GH +S G+A A + + S++ Sbjct: 82 LTGRRDGMADLRMPNGIAGFPRRNESPYDTFGTGHS--STSISAALGMAIAAQQQGSERR 139 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + N++ ++ +N ++ +V Sbjct: 140 AVAIIGDGAMTAGMAFEALNNAGAMDANLLVILNDNDMSISPNV 183 >gi|195953435|ref|YP_002121725.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hydrogenobaculum sp. Y04AAS1] gi|195933047|gb|ACG57747.1| deoxyxylulose-5-phosphate synthase [Hydrogenobaculum sp. Y04AAS1] Length = 627 Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust. Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 55/205 (26%) Query: 132 RQGGISKGKGGSMHMF-STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDG 190 ++GGIS G + + S + F GH +S G A + D V GDG Sbjct: 93 KKGGIS----GFLRIEESLYDAFGAGHS--STSISAAEGFRVAKDLLKDDSYVVAVIGDG 146 Query: 191 AANQGQVYESF-NIAALWNLNVIYVIENNQYAMGTSVSRASAQTN--------------- 234 A G VYE+ NI L + +I ++ +N+ ++ ++ S N Sbjct: 147 AMTAGMVYEALNNIGHLHHNKLIIILNDNEMSISKNIGAISTYLNKLITGRHIQDTRNKI 206 Query: 235 ------------------------FSKRGVSFNIPGMQ----VDGMDIRAVKATMDKAVA 266 F+ G+ F G+ +DG + A++ T+ A Sbjct: 207 KNILDKAGFVPRRFAKLTEEFVKGFATPGILFEELGLNYIGIIDGHNEEALETTLKNA-- 264 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSD 291 ++ GP++I ++T + +G+ ++ Sbjct: 265 --KSIDGPVLIHIVTKKGKGYEPAE 287 >gi|9971824|gb|AAG10432.1| 1-deoxy-D-xylulose-5-phosphate synthase [Tagetes erecta] Length = 725 Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A + + GDGA GQ YE+ N A Sbjct: 183 SNHDAFGAGHS--STSISAGLGMAVGRDLLGKNNHVIAVIGDGAMTAGQAYEAMNNAGYL 240 Query: 208 NLNVIYVIENNQ 219 + N+I V+ +N+ Sbjct: 241 DSNLIIVLNDNR 252 >gi|56416644|ref|YP_153718.1| alpha-ketoglutarate decarboxylase [Anaplasma marginale str. St. Maries] gi|56387876|gb|AAV86463.1| 2-oxoglutarate dehydrogenase E1 component [Anaplasma marginale str. St. Maries] Length = 930 Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust. Identities = 40/182 (21%), Positives = 86/182 (47%), Gaps = 12/182 (6%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQ 232 +R + ++ G+ A QG V E F ++ + + +++V+ NNQ +G + S+ Sbjct: 341 KRQPVLGILVHGNAAFIGQGVVSEGFTLSGVAGYSPGGIVHVVVNNQ--VGFTADPESSM 398 Query: 233 TNFSKRGVS--FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 T+F V+ + P V+G D +V D A+ Y ++++++ YR GH+ Sbjct: 399 TSFYCSDVAKMIDAPVFHVNGDDPESVLLVADLAMEYRSKFGKDVVVDIVCYRRFGHNEG 458 Query: 291 DPANYRTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D + T+ + + + H + + +RL+ ++ D+ + R ++ + FA+S Sbjct: 459 DEPMF-TQPLMYKRIAAHKTVASLYAERLISEGVVTKEDVDKSRGEFRAVLEEA--FAES 515 Query: 350 DK 351 K Sbjct: 516 AK 517 >gi|308050197|ref|YP_003913763.1| 2-oxoglutarate dehydrogenase E1 component [Ferrimonas balearica DSM 9799] gi|307632387|gb|ADN76689.1| 2-oxoglutarate dehydrogenase E1 component [Ferrimonas balearica DSM 9799] Length = 935 Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 5/118 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+FN++ V I ++ NNQ TS + T + + Sbjct: 352 MPITIHGDSAITGQGIVQETFNMSQTRGFKVGGAIRIVVNNQVGFTTSNPEDTRSTEYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P + V+ D AV AV + ++I+++ YR GH+ +D N Sbjct: 412 DIAKMVQAPVLHVNADDPEAVAFVAQLAVDFRYEFGRDVVIDLICYRRHGHNEADEPN 469 >gi|325680846|ref|ZP_08160384.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruminococcus albus 8] gi|324107626|gb|EGC01904.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruminococcus albus 8] Length = 616 Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S GIA+A K + + + GDGA + G YE N A Sbjct: 110 SEHDAFISGHS--SNSISAALGIAYAKKLQGDEHHAIAVLGDGAMSGGLSYEGLNNAGKS 167 Query: 208 NLNVIYVIENNQYAMGTSV 226 N+I ++ N+ ++ +V Sbjct: 168 ETNIIVILNYNEMSISRNV 186 >gi|326501314|dbj|BAJ98888.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 714 Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +LG +A + +++ I V+ GDGA GQ YE+ N + Sbjct: 174 SAHDAFGVGHSSTSISAALGMAVARDLQGKKNHVISVI--GDGAMTAGQAYEAMNNSGFL 231 Query: 208 NLNVIYVIENNQ 219 + N+I V+ +N+ Sbjct: 232 DSNMIVVLNDNK 243 >gi|208434297|ref|YP_002265963.1| 1-deoxyxylulose-5-phosphate synthase [Helicobacter pylori G27] gi|226801559|sp|B5ZAB7|DXS_HELPG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|208432226|gb|ACI27097.1| 1-deoxyxylulose-5-phosphate synthase [Helicobacter pylori G27] Length = 618 Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 82/194 (42%), Gaps = 18/194 (9%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IVGM + + I T+++ + H L G ++ + + G G Sbjct: 37 GGHLSSSLGAVELIVGMHALFDCQKNPFIFDTSHQAYAHKLLTGRFESFSTLRQFKGLSG 96 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH VS+G G+A A +++ + + GDG+ + Sbjct: 97 FTKPSE-------SAYDYFIAGHS--STSVSIGVGVAKAFCLKQALGMPIALLGDGSISA 147 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G YE+ N +I ++ +N+ ++ T + S + +G P Q + Sbjct: 148 GIFYEALNELGDRKYPMIMILNDNEMSISTPIGALSKALSQLMKG-----PFYQSFRSKV 202 Query: 255 RAVKATMDKAVAYC 268 + + +T+ ++V Y Sbjct: 203 KKILSTLPESVNYL 216 >gi|189218084|ref|YP_001938726.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, or related enzyme [Methylacidiphilum infernorum V4] gi|161075843|gb|ABX56669.1| 2-oxoglutarate dehydrogenase E1 component [Methylacidiphilum infernorum V4] gi|189184942|gb|ACD82127.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, or related enzyme [Methylacidiphilum infernorum V4] Length = 920 Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 10/169 (5%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 +R + V+ GD + QG V E+ N++ L +++I NNQ T + Sbjct: 339 KRKKVLPVLIHGDASFMGQGVVQETLNLSRLEGYKTGGTLHIIINNQIGFTTVPQDGRST 398 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + + + +P V+G D A + A+ Y + ++++++ YR GH+ D Sbjct: 399 HHCTAVALMLAVPIFHVNGDDPLAAVFAVLTALEYRQVFGQDVVVDLIGYRKYGHNEGDE 458 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN-VRKII 340 ++ T+ + + + H I V ++ GD+ E N RKI Sbjct: 459 PSF-TQPLLYKAIAQHPNISDV----FLDQLIKTGDMTREEANEYRKIF 502 >gi|62471536|gb|AAH93574.1| LOC780759 protein [Xenopus laevis] Length = 656 Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust. Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 9/150 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ K+ V C GDG ++G V+E+ A + L N++ + Sbjct: 152 GSLGQGLGAACGMAYTGKFFDKASYRVFCLLGDGEVSEGSVWEAMAFAGFYKLDNLVAIF 211 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A C P Sbjct: 212 DVNRLGQSEPAPLQHKVEVYQKRCEAFGWHSLVVDGHSVEEL------CKALCHVKNQPT 265 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINEM 304 I T++ +G S + D N+ + E+ Sbjct: 266 AIIAKTFKGKGISGVEDKENWHGKPLPKEL 295 >gi|330445469|ref|ZP_08309121.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489660|dbj|GAA03618.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 943 Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V + ++ NNQ TS + T Sbjct: 350 SKVLPITIHGDSAVAGQGVVAETFNMSQARGYRVGGTVRIVVNNQVGFTTSNPSDTRSTE 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A + K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQAPIFHVNADDPEAVAFVTRLAFDFRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|70732811|ref|YP_262578.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens Pf-5] gi|118595604|sp|Q4K5A5|DXS_PSEF5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|68347110|gb|AAY94716.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens Pf-5] Length = 633 Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 48/184 (26%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + + S++ + GDGA G +E+ N A + N++ ++ Sbjct: 126 GVGHSSTSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVIL 185 Query: 216 ENNQYAMGTSV------------SRASAQTNFSKRGVSFNIPGM---------------- 247 +N ++ +V SR A + V +PG Sbjct: 186 NDNDMSISRNVGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAWEIARRTEEYAKGMLV 245 Query: 248 --------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--D 291 +DG D+ + AT+ R KGP + ++T + +G + + D Sbjct: 246 PGTLFEELGWNYIGPIDGHDLPTLIATLRN----MRDLKGPQFLHVVTKKGKGFAPAEVD 301 Query: 292 PANY 295 P Y Sbjct: 302 PIGY 305 >gi|317012192|gb|ADU82800.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori Lithuania75] Length = 616 Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 82/194 (42%), Gaps = 18/194 (9%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IVGM + + I T+++ + H L G ++ + + G G Sbjct: 35 GGHLSSSLGAVELIVGMHALFDCQKNPFIFDTSHQAYAHKLLTGRFESFSTLRQFKGLSG 94 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH VS+G G+A A +++ + + GDG+ + Sbjct: 95 FTKPSE-------SAYDYFIAGHS--STSVSIGVGVAKAFCLKQALGMPIALLGDGSISA 145 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G YE+ N +I ++ +N+ ++ T + S + +G P Q + Sbjct: 146 GIFYEALNELGDRKYPMIMILNDNEMSISTPIGALSKALSQLMKG-----PFYQSFRSKV 200 Query: 255 RAVKATMDKAVAYC 268 + + +T+ ++V Y Sbjct: 201 KKILSTLPESVNYL 214 >gi|148554381|ref|YP_001261963.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas wittichii RW1] gi|166201541|sp|A5V6A9|DXS_SPHWW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|148499571|gb|ABQ67825.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Sphingomonas wittichii RW1] Length = 639 Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +GG + F+ + + F H +S G A ANK + Sbjct: 87 LTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHS--STSISAALGFAVANKLANKEGR 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDGA + G YE+ N A +I ++ +N ++ V SA Sbjct: 145 AIAVIGDGAMSAGMAYEAMNNAKQAGNRLIVILNDNDMSIAPPVGALSA 193 >gi|62180912|ref|YP_217329.1| putative transketolase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|197251311|ref|YP_002147301.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|224583171|ref|YP_002636969.1| transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62128545|gb|AAX66248.1| putative transketolase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|197215014|gb|ACH52411.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|224467698|gb|ACN45528.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322715390|gb|EFZ06961.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 276 Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKI-CVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K RR +++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLARRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 I+ N+ + + + + +F + V G DI + A + Sbjct: 173 IDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAVV 219 >gi|15644982|ref|NP_207152.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori 26695] gi|13124120|sp|O25121|DXS_HELPY RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|2313455|gb|AAD07422.1| deoxyxylulose-5-phosphate synthase, putative (dxs) [Helicobacter pylori 26695] Length = 618 Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 82/194 (42%), Gaps = 18/194 (9%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IVGM + + I T+++ + H L G ++ + + G G Sbjct: 37 GGHLSSSLGAVELIVGMHALFDCQKNPFIFDTSHQAYAHKLLTGRFESFSTLRQFKGLSG 96 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH VS+G G+A A +++ + + GDG+ + Sbjct: 97 FTKPSE-------SAYDYFIAGHS--STSVSIGVGVAKAFCLKQALGMPIALLGDGSISA 147 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G YE+ N +I ++ +N+ ++ T + S + +G P Q + Sbjct: 148 GIFYEALNELGDRKYPMIMILNDNEMSISTPIGALSKALSQLMKG-----PFYQSFRSKV 202 Query: 255 RAVKATMDKAVAYC 268 + + +T+ ++V Y Sbjct: 203 KKILSTLPESVNYL 216 >gi|294671251|ref|ZP_06736104.1| hypothetical protein NEIELOOT_02961 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307079|gb|EFE48322.1| hypothetical protein NEIELOOT_02961 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 943 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Query: 211 VIYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 ++V+ NNQ TS +R + T + + + P V+G D AV M A+ Y + Sbjct: 384 TVHVVVNNQIGFTTSDTRDTRSTVYCTDIAKMVDAPIFHVNGDDPEAVCMVMQAAMDYRK 443 Query: 270 AHKGPIIIEMLTYRYRGHSMSD 291 ++++++ YR GH+ SD Sbjct: 444 TFHKDVVVDVVCYRKNGHNESD 465 >gi|71908472|ref|YP_286059.1| alpha-ketoglutarate decarboxylase [Dechloromonas aromatica RCB] gi|71848093|gb|AAZ47589.1| 2-oxoglutarate dehydrogenase E1 component [Dechloromonas aromatica RCB] Length = 945 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 29/234 (12%) Query: 87 GQEAVIVGMKMSLTEG-----DQMIT--AYREHGHIL--ACGVDASKIMAELTGRQGGIS 137 G E++IV M ++ G D+++ A+R ++L G S + AE G++ Sbjct: 233 GGESLIVSMDEAIRAGGKLGIDEVVIGMAHRGRLNVLVNTLGKAPSMLFAEFEGKKKSDL 292 Query: 138 KGKGGSMHM-FSTKNGFYGG--HGIVGAQVS-------LGTGIAFANKYRR-----SDKI 182 HM FS+ GG H + S + G +A + RR S + Sbjct: 293 SAGDVKYHMGFSSDVSTPGGPCHLTLAFNPSHLEIVNPVVEGSVYARQVRRGEDGKSKVL 352 Query: 183 CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKR 238 VV GD A A QG E N A ++++ NNQ TS R ++ Sbjct: 353 PVVVHGDSAVAGQGVNQEMLNFAQTRGYGTGGTLHIVVNNQIGFTTSDPRDYRSGHYCTD 412 Query: 239 GVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + P V+G D AV A+ + + K ++I+++ +R GH+ D Sbjct: 413 IFKMADAPIFHVNGDDPEAVALVTQLAIEFRQQFKKDVVIDIICFRKLGHNEQD 466 >gi|150016580|ref|YP_001308834.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium beijerinckii NCIMB 8052] gi|189027771|sp|A6LU48|DXS_CLOB8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|149903045|gb|ABR33878.1| deoxyxylulose-5-phosphate synthase [Clostridium beijerinckii NCIMB 8052] Length = 618 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 51/226 (22%), Positives = 82/226 (36%), Gaps = 59/226 (26%) Query: 123 SKIMAELTGRQGGISK-GKGGSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKY 176 S I LTGR+ G K K + F +N F GH +S GIA A Sbjct: 75 SYIYKILTGRKEGFKKLRKYDGISGFPKRNESKYDYFDTGHS--STSISAALGIARARDL 132 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 ++ + GDGA G E+ N +I ++ +NQ ++ T+V S N Sbjct: 133 KKEKYNVISVIGDGALTGGMAIEALNDVGFRKTKLIIILNDNQMSISTNVGGLSRYLNKL 192 Query: 237 KRGVSFN----------------------------------IPGM-----------QVDG 251 + +N +P M +DG Sbjct: 193 RIAPVYNKLKTDIHASLDNSNLGKNIAGKISKVKDSIKQLIVPSMFFENMGVKYIGPIDG 252 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD--PANY 295 DI A+ KA + P+II +LT + +G+++++ P+ Y Sbjct: 253 HDIDAMTEVFIKA----KEINEPVIIHILTQKGKGYALAEESPSKY 294 >gi|149185145|ref|ZP_01863462.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. SD-21] gi|148831256|gb|EDL49690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. SD-21] Length = 640 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 12/168 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +GG + F+ + + F H +S G A ANK + Sbjct: 87 LTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHS--STSISAALGFAMANKMQGRPGR 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS---AQTNFSKRG 239 + GDGA + G YE+ N A ++ ++ +N ++ V S A+T S Sbjct: 145 GIAVIGDGAMSAGMAYEAMNNAEQAGNRLVVILNDNDMSIAPPVGGLSAYLARTVSSSEY 204 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH-KGPIIIEMLTYRYRG 286 + ++ R V ++++KA Y R G + E L + Y G Sbjct: 205 LGLRSLASRLSKKLSRRVHSSLEKAEEYARGMVTGGTLFEELGFYYVG 252 >gi|330812002|ref|YP_004356464.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380110|gb|AEA71460.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 632 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 48/184 (26%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + + S++ + GDGA G +E+ N A + N++ ++ Sbjct: 126 GVGHSSTSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVIL 185 Query: 216 ENNQYAMGTSV------------SRASAQTNFSKRGVSFNIPGM---------------- 247 +N ++ +V SR A + V +PG Sbjct: 186 NDNDMSISRNVGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAWEIARRTEEYAKGMLV 245 Query: 248 --------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--D 291 +DG D+ + AT+ R KGP + ++T + +G + + D Sbjct: 246 PGTLFEELGWNYIGPIDGHDLPTLIATLRN----MRDLKGPQFLHVVTKKGKGFAPAEVD 301 Query: 292 PANY 295 P Y Sbjct: 302 PIGY 305 >gi|313200382|ref|YP_004039040.1| deoxyxylulose-5-phosphate synthase [Methylovorus sp. MP688] gi|312439698|gb|ADQ83804.1| deoxyxylulose-5-phosphate synthase [Methylovorus sp. MP688] Length = 613 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G++ + G S + F GH +S G+A A + + S++ Sbjct: 82 LTGRRDGMADLRMPNGIAGFPRRNESPYDTFGTGHS--STSISAALGMAIAAQQQGSERR 139 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + N++ ++ +N ++ +V Sbjct: 140 AVAIIGDGAMTAGMAFEALNNAGAMDANLLVILNDNDMSISPNV 183 >gi|198242865|ref|YP_002216412.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205353456|ref|YP_002227257.1| transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857759|ref|YP_002244410.1| transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|197937381|gb|ACH74714.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205273237|emb|CAR38200.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206709562|emb|CAR33907.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326624164|gb|EGE30509.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628548|gb|EGE34891.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 276 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 5/112 (4%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKI-CVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K RR +++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLARRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 I+ N+ + + + + +F + V G DI + A + + Sbjct: 173 IDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAVVQPVLP 224 >gi|167549655|ref|ZP_02343414.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|238912380|ref|ZP_04656217.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|205325416|gb|EDZ13255.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 276 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKI-CVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K RR +++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLARRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 I+ N+ + + + + +F + V G DI + A + Sbjct: 173 IDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAVV 219 >gi|91793537|ref|YP_563188.1| alpha-ketoglutarate decarboxylase [Shewanella denitrificans OS217] gi|91715539|gb|ABE55465.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella denitrificans OS217] Length = 940 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 5/113 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKR 238 + GD A QG V E+FN++ V I ++ NNQ TS + T + + Sbjct: 359 ITIHGDSAITGQGIVQETFNMSQTRGFKVGGSIRIVVNNQVGFTTSNAADVRSTEYCTDI 418 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV AV Y K ++I+++ YR GH+ +D Sbjct: 419 AKMVQAPIFHVNADDPEAVAFIAQLAVDYRNEFKRDVVIDLVCYRRHGHNEAD 471 >gi|4322462|gb|AAD16047.1| pyruvate dehydrogenase alpha subunit [Homo sapiens] gi|4322464|gb|AAD16048.1| pyruvate dehydrogenase alpha subunit [Pongo pygmaeus] gi|4322466|gb|AAD16049.1| pyruvate dehydrogenase alpha subunit [Pan troglodytes] Length = 36 Score = 39.3 bits (90), Expect = 0.86, Method: Composition-based stats. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 YRTREEI E+RS DPI ++ R++++ AS +LK Sbjct: 1 YRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELK 36 >gi|89073520|ref|ZP_01160043.1| putative 2-oxoglutarate dehydrogenase, E1 component [Photobacterium sp. SKA34] gi|89050784|gb|EAR56265.1| putative 2-oxoglutarate dehydrogenase, E1 component [Photobacterium sp. SKA34] Length = 943 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 5/121 (4%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTN 234 S + + GD A A QG V E+FN++ V I ++ NNQ TS + T Sbjct: 350 SKVLPITLHGDSAIAGQGVVAETFNMSQARGYGVGGTIRIVVNNQVGFTTSNPSDTRSTE 409 Query: 235 F-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + + P V+ D AV A + K ++I+++ YR GH+ +D Sbjct: 410 YCTDIAKMVQSPIFHVNADDPEAVAFVTRLAFDFRNEFKRDVVIDLVCYRRHGHNEADEP 469 Query: 294 N 294 N Sbjct: 470 N 470 >gi|242013045|ref|XP_002427230.1| 2-oxoglutarate dehydrogenase, putative [Pediculus humanus corporis] gi|212511538|gb|EEB14492.1| 2-oxoglutarate dehydrogenase, putative [Pediculus humanus corporis] Length = 994 Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust. Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 6/173 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQTNF-S 236 + ++ GD A A QG VYE+F+++ L I+++ NNQ T R S +N+ + Sbjct: 385 MSMLLHGDAAFAGQGVVYETFHLSNLPEYTCHGTIHIVVNNQIGFTTD-PRFSRSSNYCT 443 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 + P V+ D V A Y + ++I+++ YR GH+ D + Sbjct: 444 DVARVVDAPIFHVNADDPEKVIFACTLAADYRAKYGKDVVIDLVGYRRNGHNEIDEPMFT 503 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 +++ ++ ++L+ S+ ++K I+ I + A+S Sbjct: 504 QPLMYKKIKQRKPIVDLYAEKLVKEGVMSQDEIKNIKQTYENICEEAFSKAKS 556 >gi|146339201|ref|YP_001204249.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. ORS278] gi|259645380|sp|A4YQ36|DXS_BRASO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|146192007|emb|CAL76012.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein [Bradyrhizobium sp. ORS278] Length = 641 Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + GG + F+ + + F H +S G G+A A Sbjct: 87 LTGRRDRIRTLRTGGGLSGFTKRAESDYDPFGAAHS--STSISAGLGMAVARDLSGGKNN 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDGA + G YE+ N A N +I ++ +N ++ V SA Sbjct: 145 VIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSA 193 >gi|56479258|ref|YP_160847.1| 2-oxoglutarate dehydrogenase E1 component [Aromatoleum aromaticum EbN1] gi|56315301|emb|CAI09946.1| 2-oxoglutarate dehydrogenase complex, E1 component [Aromatoleum aromaticum EbN1] Length = 942 Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G +A + RR D+ I V+ GD A A QG E N + ++++ NNQ Sbjct: 331 GSVYARQLRRKDEAKSQVIAVLIHGDAAVAGQGVNQEMLNFSQTRGYGTGGTVHIVVNNQ 390 Query: 220 YAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + + P V+G D AV AV + + K ++++ Sbjct: 391 IGFTTSDPRDYRSSLYCTDIFKMVEAPIFHVNGDDPEAVAFATALAVEFRQEFKKDVVVD 450 Query: 279 MLTYRYRGHSMSD 291 ++ YR GH+ D Sbjct: 451 IVCYRKLGHNEQD 463 >gi|21322715|emb|CAD22531.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Medicago truncatula] gi|154815950|emb|CAN89180.1| 1-Deoxy-D-xylulose 5-phosphate synthase 2 precursor [Medicago truncatula] Length = 711 Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH +G G G G +S G G+A A Sbjct: 145 ILTGRRSRMHTIRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAVARDLLGKKNSV 204 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA GQ YE+ N A + N+I ++ +N+ Sbjct: 205 ISVIGDGAMTAGQAYEAMNNAGFIDSNLIVILNDNK 240 >gi|322490936|emb|CBZ26200.1| 2-oxoglutarate dehydrogenase E1 component,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1012 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 14/146 (9%) Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNL 209 N F G+ QVSLG + R + + GD A A QG +E+ I+ + Sbjct: 390 NPFVQGY-TRAMQVSLG-------EKGREKVLPIEIHGDAAFAGQGVAFETMCISEVGEQ 441 Query: 210 NV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 + ++V+ NNQ T + + + G +N P + V+G V + A Sbjct: 442 DTGGTVHVVCNNQIGFTTDPKSSRSSAYCTDLGRVYNCPILHVNGDYPEEVVRVFEFAAE 501 Query: 267 Y-CRAHKGPIIIEMLTYRYRGHSMSD 291 Y R HK ++I+++ YR GH+ +D Sbjct: 502 YRARFHKS-VVIDLVCYRRFGHNEND 526 >gi|296141618|ref|YP_003648861.1| transketolase [Tsukamurella paurometabola DSM 20162] gi|296029752|gb|ADG80522.1| Transketolase domain protein [Tsukamurella paurometabola DSM 20162] Length = 291 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A A + GDG ++GQV+E+ N A + L ++ +++ Sbjct: 126 GSLGHGLSIAVGMALAGRVGARPYRTFCMLGDGELHEGQVWEAANAAGHYRLGKLVAIVD 185 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N+ + + R +F +VDG D+ A+ D Sbjct: 186 RNRLCIDGFTDDVMSVEPIEDRFAAFGWQAHRVDGHDVGALLDLFD 231 >gi|168817924|ref|ZP_02829924.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205345030|gb|EDZ31794.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086776|emb|CBY96548.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 276 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKI-CVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K RR +++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLARRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 I+ N+ + + + + +F + V G DI + A + Sbjct: 173 IDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAVV 219 >gi|2660682|gb|AAB88080.1| oxoglutarate dehydrogenase [Burkholderia pseudomallei] Length = 395 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 6/118 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N+A ++++ NNQ TS R + T + Sbjct: 2 LPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQIGFTTSDPRDARSTLYCT 61 Query: 238 RGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 V P + V+G D AV A+ Y ++I+++ +R GH+ D PA Sbjct: 62 DVVKMIEAPVLHVNGDDPEAVVLATQIAIDYRMQFHKDVVIDIVCFRKLGHNEQDTPA 119 >gi|21672713|ref|NP_660780.1| 1-deoxy-D-xylulose-5-phosphate synthase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008399|sp|Q8K9A1|DXS_BUCAP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|21623356|gb|AAM67991.1| 1-deoxyxylulose-5-phosphate synthase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 585 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 12/115 (10%) Query: 129 LTGRQ---GGISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 LTGR G I K G +H F S + GH LG IA + + Sbjct: 88 LTGRAEKIGSIRKKNG--LHPFPFREESKYDILSVGHSSTSISAGLGLSIAAGKEGKNRK 145 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 ICVV GDG+ G +E+ N A + +++ V+ +NQ ++ ++ + F Sbjct: 146 TICVV--GDGSMTAGMAFEAMNHAGIIQSDLLVVLNDNQMSISKNIGALNKHLKF 198 >gi|16765668|ref|NP_461283.1| transketolase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994693|ref|ZP_02575784.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168242464|ref|ZP_02667396.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261638|ref|ZP_02683611.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194443548|ref|YP_002041603.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450405|ref|YP_002046396.1| transketolase domain-containing protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|200387104|ref|ZP_03213716.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|16420883|gb|AAL21242.1| putative transketolase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194402211|gb|ACF62433.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408709|gb|ACF68928.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|199604202|gb|EDZ02747.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205327496|gb|EDZ14260.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338374|gb|EDZ25138.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205349430|gb|EDZ36061.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261247547|emb|CBG25374.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301158899|emb|CBW18412.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913331|dbj|BAJ37305.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|323130672|gb|ADX18102.1| putative transketolase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989274|gb|AEF08257.1| putative transketolase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 276 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKI-CVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K RR +++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLARRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 I+ N+ + + + + +F + V G DI + A + Sbjct: 173 IDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAVV 219 >gi|15965451|ref|NP_385804.1| putative transketolase alpha subunit protein [Sinorhizobium meliloti 1021] gi|307310626|ref|ZP_07590273.1| Transketolase domain protein [Sinorhizobium meliloti BL225C] gi|307321009|ref|ZP_07600416.1| Transketolase domain protein [Sinorhizobium meliloti AK83] gi|15074632|emb|CAC46277.1| Putative transketolase alpha subunit [Sinorhizobium meliloti 1021] gi|306893383|gb|EFN24162.1| Transketolase domain protein [Sinorhizobium meliloti AK83] gi|306899736|gb|EFN30362.1| Transketolase domain protein [Sinorhizobium meliloti BL225C] Length = 284 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 3/125 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + +G G+A K +++ DG +G +E+ AA L N+I +++ Sbjct: 124 GSLGQGLGIGVGMALGLKAKKNPAFVYNLMSDGELGEGSTWEAAMSAAHHKLGNLICLVD 183 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 N+Q A G S ++ + +F +VDG DI A+ A D A A A I Sbjct: 184 FNDQQADGKSTEMLCSEP-LGAKWAAFGWHVQRVDGNDIPALVAAFDAARALEEAMPRVI 242 Query: 276 IIEML 280 I + L Sbjct: 243 ICDTL 247 >gi|84494556|ref|ZP_00993675.1| alpha-ketoglutarate decarboxylase [Janibacter sp. HTCC2649] gi|84384049|gb|EAP99929.1| alpha-ketoglutarate decarboxylase [Janibacter sp. HTCC2649] Length = 1281 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 10/134 (7%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A A QG V E+ N++ L ++++ NNQ TS S + + T + Sbjct: 678 LPVLMHGDAAFAGQGVVAETLNLSQLRGYRTGGTVHIVVNNQVGFTTSPSSSRSSTYSTD 737 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------SMSD 291 P V+G D A + A + + ++I+M+ YR RGH SM+ Sbjct: 738 VARMIQAPIFHVNGDDPEACVRVAELAYEFRKDFAKDVVIDMVCYRRRGHNEGDDPSMTQ 797 Query: 292 PANYRTREEINEMR 305 P Y E +R Sbjct: 798 PLMYNLIEAKRSVR 811 >gi|326443336|ref|ZP_08218070.1| alpha-ketoglutarate decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 1287 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 8/127 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + + S++++ Sbjct: 697 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAAPESSRSSMYA 754 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 V+ I P V+G D A A + + ++I+++ YR RGH+ D + Sbjct: 755 TDVARMIEAPIFHVNGDDPEACVRVARLAFEFRQTFNKDVVIDLICYRRRGHNEGDNPQF 814 Query: 296 RTREEIN 302 + N Sbjct: 815 TNPQMYN 821 >gi|307825479|ref|ZP_07655697.1| 2-oxoglutarate dehydrogenase, E1 subunit [Methylobacter tundripaludum SV96] gi|307733365|gb|EFO04224.1| 2-oxoglutarate dehydrogenase, E1 subunit [Methylobacter tundripaludum SV96] Length = 942 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 5/164 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 I ++ GD A + QG + E+ N++ A ++++ NNQ TS + T + Sbjct: 353 IPILIHGDAAFSGQGIIMETLNMSQTRAFSTGGTVHIVINNQIGFTTSNPLDARSTLYCT 412 Query: 238 RGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 S P V+G D AV A+ Y ++I+++ YR GH+ +D + Sbjct: 413 DVASMIQAPVFHVNGDDPDAVIFVTQLAMDYRMTFNKDVVIDLICYRRLGHNEADEPSTT 472 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 ++R + ++L+ + E+E N +K++ Sbjct: 473 QPLMYKKIRKLKTTRKLYAEKLIKTGLITHEQATELEQNYQKLL 516 >gi|195591264|ref|XP_002085362.1| GD12349 [Drosophila simulans] gi|194197371|gb|EDX10947.1| GD12349 [Drosophila simulans] Length = 623 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 4/109 (3%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 G +G +S+ G+A+ KY ++D V GDG A +G V+ES + A + L+ + VI Sbjct: 122 GSLGQGISVAAGMAYVGKYLDKADYRTYVIVGDGEATEGAVWESLHFAGHYCLDNLCVIF 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI-RAVKATMDKA 264 + + V + + +R +F + ++G DI VKA ++ A Sbjct: 182 DMNKVFCSDV--GTEMEVYRERLDAFGFNALVLNGHDIDELVKAFINAA 228 >gi|315652072|ref|ZP_07905073.1| 1-deoxy-D-xylulose-5-phosphate synthase [Eubacterium saburreum DSM 3986] gi|315485719|gb|EFU76100.1| 1-deoxy-D-xylulose-5-phosphate synthase [Eubacterium saburreum DSM 3986] Length = 625 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 49/210 (23%), Positives = 79/210 (37%), Gaps = 57/210 (27%) Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 GGIS S F F GH +S G G+AF + + + GDGA Sbjct: 94 GGISGFPKTSESKFDV---FNTGHS--STSLSAGLGMAFGRDIKGENYRVISVIGDGALT 148 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMG----------TSVSRASAQTNF-------- 235 G YE+ N A N I V+ +N ++ S+ A TN Sbjct: 149 GGMAYEALNNAVQIKTNFIMVLNDNDMSISKNVGGMNEYLNSIRTADGYTNLKKIVNNSL 208 Query: 236 ----------------SKRGVS-FNIPGM-----------QVDGMDIRAVKATMDKAVAY 267 +K G+ IPGM VDG +I A+ ++A Sbjct: 209 ERLPYIGKPIIKSIKQTKNGIKQILIPGMLFENMGITYLGPVDGHNITALLRVFEEA--- 265 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSD--PANY 295 + +G +++ +LT + +G++ ++ P N+ Sbjct: 266 -KKVEGSVLVHVLTKKGKGYTPAEKHPENF 294 >gi|258544464|ref|ZP_05704698.1| 2-oxoglutarate dehydrogenase, E1 component [Cardiobacterium hominis ATCC 15826] gi|258520272|gb|EEV89131.1| 2-oxoglutarate dehydrogenase, E1 component [Cardiobacterium hominis ATCC 15826] Length = 943 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 9/179 (5%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A A QG + E+ ++ + V +++I NNQ TS + + Sbjct: 355 VPIQIHGDAAFAGQGIIMETLQLSQVRGYRVGGSLHIIVNNQIGFTTSNPLDTRSAMYCS 414 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 P + V+G D A+ + A Y R + I I+++ YR GH+ +D Sbjct: 415 DAAKLIQSPVLHVNGDDPEALAFAAELAADYLREFQKDIFIDIVCYRRLGHNEADEPAAT 474 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 ++R + P + +RL+ + GD ++++ + R+ +E S P P Sbjct: 475 QPMMYQKIRKHAVPAQVYAERLVAEGVIAAGDYEKLQDDYRQ----RLEAGDSVSRPQP 529 >gi|210134546|ref|YP_002300985.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori P12] gi|210132514|gb|ACJ07505.1| 1-deoxyxylulose-5-phosphate synthase [Helicobacter pylori P12] Length = 616 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 82/194 (42%), Gaps = 18/194 (9%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IVGM + + I T+++ + H L G ++ + + G G Sbjct: 35 GGHLSSSLGAVELIVGMHALFDCQKNPFIFDTSHQAYAHKLLTGRFESFSTLRQFKGLSG 94 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH VS+G G+A A +++ + + GDG+ + Sbjct: 95 FTKPSE-------SAYDYFIAGHS--STSVSIGVGVAKAFCLKQALGMPIALLGDGSISA 145 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G YE+ N +I ++ +N+ ++ T + S + +G P Q + Sbjct: 146 GIFYEALNELGDRKYPMIMILNDNEMSISTPIGALSKALSQLMKG-----PFYQSFRSKV 200 Query: 255 RAVKATMDKAVAYC 268 + + +T+ ++V Y Sbjct: 201 KKILSTLPESVNYL 214 >gi|171913443|ref|ZP_02928913.1| 2-oxoglutarate dehydrogenase, E1 subunit [Verrucomicrobium spinosum DSM 4136] Length = 921 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 10/173 (5%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + V+ GD A A QG V E N++ L I+++ NNQ T + A + Sbjct: 331 RKKVLPVLIHGDAAFAGQGIVAEVLNLSQLPGYRTGGTIHLVTNNQIGFTTLPADARSSD 390 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + P + V+G V A+ + + ++++++ YR GH+ +D Sbjct: 391 YCTDIAKVIEAPVIHVNGDSPVDVAFAARLALEFRQTFSRDVVLDIVCYRRHGHNETDEP 450 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN-VRKIINNSVE 345 ++ T + + P +RL A EG LK ++ +RK + ++E Sbjct: 451 SFTTPHLARSIAEHPTPATLYGQRL-----AEEGVLKAERVDELRKELEAALE 498 >gi|159155766|gb|AAI54960.1| LOC780759 protein [Xenopus laevis] Length = 656 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 9/150 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ K+ V C GDG ++G V+E+ A + L N++ + Sbjct: 152 GSLGQGLGAACGMAYTGKFFDKASYRVFCLLGDGEVSEGSVWEAMAFAGFYKLDNLVAIF 211 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A C P Sbjct: 212 DVNRLGQSEPAPLQHKVEVYQKRCEAFGWHSLVVDGHSVEEL------CKALCHVKNQPT 265 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINEM 304 I T++ +G S + D N+ + E+ Sbjct: 266 AIIAKTFKGKGISGVEDKENWHGKPLPKEL 295 >gi|317010626|gb|ADU84373.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori SouthAfrica7] Length = 616 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 81/194 (41%), Gaps = 18/194 (9%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IVGM + + I T+++ + H L G ++ + + G G Sbjct: 35 GGHLSSSLGAVELIVGMHALFDCQKNPFIFDTSHQAYAHKLLTGRFESFSTLRQFKGLSG 94 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH VS+G G+A A + ++ + + GDG+ + Sbjct: 95 FTKPSE-------SAYDYFIAGHS--STSVSVGVGVAKAFRLKQELGMPIALLGDGSISA 145 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G YE+ N +I ++ +N+ ++ T + S + +G P Q + Sbjct: 146 GIFYEALNELGDRKYPMIMILNDNEMSISTPIGALSKALSQLMKG-----PFYQSFRSKV 200 Query: 255 RAVKATMDKAVAYC 268 + + T+ ++V Y Sbjct: 201 KKILNTLPESVNYL 214 >gi|225387298|ref|ZP_03757062.1| hypothetical protein CLOSTASPAR_01050 [Clostridium asparagiforme DSM 15981] gi|225046612|gb|EEG56858.1| hypothetical protein CLOSTASPAR_01050 [Clostridium asparagiforme DSM 15981] Length = 260 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 14/166 (8%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 GF G +G + G+A+ K +R D V GDG N+G ++E+ L+ Sbjct: 104 GFEVSAGSLGHGFPIAVGMAYGKKVQRQDGHVYVLAGDGEMNEGTMWEAALYCGSERLDN 163 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 + +I ++ +++ ++ + Q R F + + +G DI M KA+ + +++ Sbjct: 164 LTLIIDDNHSIDVMINIRNIQDKM--RAFGFEV--IIANGHDI----TDMRKALLFRQSN 215 Query: 272 KGPIIIEMLTYRYRGHS--MSDPANYR---TREEINEMRSNHDPIE 312 K P+ I T R G + M+D A + + EE+ ++ D E Sbjct: 216 K-PVAIIAQTKRGYGSATIMTDDAWFHRAPSEEELTRLKKEVDDFE 260 >gi|213417844|ref|ZP_03350949.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 325 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|329908092|ref|ZP_08274827.1| 1-deoxy-D-xylulose 5-phosphate synthase [Oxalobacteraceae bacterium IMCC9480] gi|327546762|gb|EGF31698.1| 1-deoxy-D-xylulose 5-phosphate synthase [Oxalobacteraceae bacterium IMCC9480] Length = 616 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 13/104 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH ++G G G +S G+A A + + ++ Sbjct: 80 ILTGRRDQMHTLRQRDGISGFPRRAESEYDTFGTAHSSTSISAALGMALAARTKGENRHA 139 Query: 184 VVCFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAMGTSV 226 V GDGA G V+E+ N A ++ ++N++ ++ +N ++ V Sbjct: 140 VAIIGDGAMTAGMVFEAMNNAGVYDDINLLVILNDNDMSISPPV 183 >gi|329118658|ref|ZP_08247362.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria bacilliformis ATCC BAA-1200] gi|327465393|gb|EGF11674.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria bacilliformis ATCC BAA-1200] Length = 630 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 33/214 (15%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-------YGGHGIVGAQVSLGT--GIAFANKYRRS 179 LTGR +G+ ++ F GF Y G+ + S+G G+A A++ Sbjct: 84 LTGR-----RGRMHTLRQFGGLAGFPKRSESEYDDFGVGHSSTSIGAALGMAEADRLMGR 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVSR----ASAQTN 234 D V GDGA GQ +E+ N A + + +++ ++ +N+ ++ +V + Sbjct: 139 DTRSVAVIGDGAMTAGQAFEALNCAGDMADTDLLVILNDNEMSISPNVGALPKYLARNVM 198 Query: 235 FSKRGVSFNIPGMQVDGMD-IRAVKATMDKAVAYCRAH--KGPIIIEMLT-YRYRGHSMS 290 RGV NI +D + AVK KA +A+ + ++ + L+ + G + + Sbjct: 199 RDMRGVLHNIKSQSAFVLDKLPAVKEIAQKAEETIKAYASESELVRQSLSLFENFGFAYT 258 Query: 291 DPAN----YRTREEINEMRSNHDPIEQVRKRLLH 320 PA+ + + + E+R P +LLH Sbjct: 259 GPADGHNVVQLADTLAELRRKKGP------KLLH 286 >gi|296101541|ref|YP_003611687.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056000|gb|ADF60738.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 620 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 18/109 (16%) Query: 129 LTGR--QGGISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFA----NKYR 177 LTGR Q G + KGG +H F S + GH +S G GIA A NK R Sbjct: 88 LTGRRDQIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKENKQR 144 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 R+ +CV+ GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RT--VCVI--GDGAITAGMAFEAMNHAGDIKPDMLVILNDNEMSISENV 189 >gi|297544574|ref|YP_003676876.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842349|gb|ADH60865.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 620 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 50/248 (20%), Positives = 93/248 (37%), Gaps = 74/248 (29%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFY----GGHGIVGA-----QVSLGTGIAFANKYRRS 179 LTGR K + ++ F+ +GF H + GA +S GIA A + Sbjct: 79 LTGR-----KDQFDTLRKFNGLSGFTKRTESVHDVFGAGHSSTSISAALGIAKARDLKGE 133 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V GDGA G E+ N A N+I V+ +N+ ++ +V S + + Sbjct: 134 KYSVVAVIGDGALTGGMALEALNDAGRSETNLIVVLNHNEMSISENVGSLSLYLSKLRTD 193 Query: 240 VSFN-----------------------------------IPGM-----------QVDGMD 253 ++N +PGM +DG D Sbjct: 194 PTYNKLKQEVDNLLNIVPPIGKSLHKYLEKIKDSVKQLVVPGMFFEEMGFTYLGPIDGHD 253 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD----------PANYRTREEINE 303 + + +++A + KGPI+I ++T + +G+ ++ P + +T + +NE Sbjct: 254 VGGLIEVLERA----KRMKGPILIHVVTKKGKGYKFAEKFPEKFHSAAPFDIQTGKFVNE 309 Query: 304 MRSNHDPI 311 + + + Sbjct: 310 EQETYSDV 317 >gi|168015770|ref|XP_001760423.1| predicted protein [Physcomitrella patens subsp. patens] gi|162688437|gb|EDQ74814.1| predicted protein [Physcomitrella patens subsp. patens] Length = 736 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 8/97 (8%) Query: 129 LTGRQGGI-----SKGKGGSMHMFSTK-NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+G + + G G + ++ + F GH LG + K R ++ I Sbjct: 165 LTGRRGKMRTLRQTAGISGFVKRAESEYDPFGAGHSSTSISAGLGMAVGRDLKGRTNNVI 224 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V+ GDGA GQ YE+ N A + N+I ++ +N+ Sbjct: 225 AVI--GDGAMTAGQAYEAMNNAGYLDCNMIVILNDNK 259 >gi|323693842|ref|ZP_08108033.1| transketolase [Clostridium symbiosum WAL-14673] gi|323502094|gb|EGB17965.1| transketolase [Clostridium symbiosum WAL-14673] Length = 285 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 8/157 (5%) Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL- 209 NG G +G +S G+A + K GDG +GQV+E+ A L Sbjct: 108 NGVDMSSGSLGQGISAAVGMAVSAKISGDSYHVYTLLGDGEIQEGQVWEAAMFAGHRKLD 167 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYC 268 N+ +++NN + S+ + K+ +FN + V DG D+ + D+A Sbjct: 168 NLTVIVDNNNLQIDGSIEDVCSPYPIDKKFEAFNFHVICVEDGNDMEQLIKAFDEA---- 223 Query: 269 RAHKG-PIIIEMLTYRYRGHS-MSDPANYRTREEINE 303 + KG P+ + T + +G S M + A++ + +E Sbjct: 224 KTVKGKPVAVIARTLKGKGVSFMENKASWHGKAPNDE 260 >gi|289578294|ref|YP_003476921.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter italicus Ab9] gi|289528007|gb|ADD02359.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter italicus Ab9] Length = 620 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 50/248 (20%), Positives = 93/248 (37%), Gaps = 74/248 (29%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFY----GGHGIVGA-----QVSLGTGIAFANKYRRS 179 LTGR K + ++ F+ +GF H + GA +S GIA A + Sbjct: 79 LTGR-----KDQFDTLRKFNGLSGFTKRAESVHDVFGAGHSSTSISAALGIAKARDLKGE 133 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 V GDGA G E+ N A N+I V+ +N+ ++ +V S + + Sbjct: 134 KYSVVAVIGDGALTGGMALEALNDAGRSETNLIVVLNHNEMSISENVGSLSLYLSKLRTD 193 Query: 240 VSFN-----------------------------------IPGM-----------QVDGMD 253 ++N +PGM +DG D Sbjct: 194 PTYNKLKQEVDNLLNIAPPIGKSLHKYIEKIKDSVKQLVVPGMFFEEMGFTYLGPIDGHD 253 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD----------PANYRTREEINE 303 + + +++A + KGPI+I ++T + +G+ ++ P + +T + +NE Sbjct: 254 VGGLIEVLERA----KRMKGPILIHVVTKKGKGYKFAEKFPEKFHSAAPFDIQTGKFVNE 309 Query: 304 MRSNHDPI 311 + + + Sbjct: 310 EQETYSDV 317 >gi|115376398|ref|ZP_01463635.1| 1-deoxy-D-xylulose-5-phosphate synthase [Stigmatella aurantiaca DW4/3-1] gi|115366605|gb|EAU65603.1| 1-deoxy-D-xylulose-5-phosphate synthase [Stigmatella aurantiaca DW4/3-1] Length = 547 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 13/156 (8%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + GH VS G G+ + V GDGA G +E N A Sbjct: 72 SPLDALAAGHSCT--AVSAGLGMLEGKRRMGKPGHVVAVLGDGALTGGLSFEGLNNAGGS 129 Query: 208 NLNVIYVIENNQYAMGTSVSRASA--QTNFSK---RGVSFNIPGMQVDGMDIRAVKATMD 262 +L ++ ++ +NQ ++ +V A +T ++ G+ F G +DG D+ A+ + Sbjct: 130 HLPLVVLLNDNQMSISANVGAIPALLRTREARAFFEGLGFTYLG-PLDGHDLGALLKALR 188 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 +A R P+++ +T + RG ++ A+ +TR Sbjct: 189 EAKHSSR----PVVVHAMTQKGRGFPPAE-ADTQTR 219 >gi|154502460|ref|ZP_02039520.1| hypothetical protein RUMGNA_00273 [Ruminococcus gnavus ATCC 29149] gi|153796856|gb|EDN79276.1| hypothetical protein RUMGNA_00273 [Ruminococcus gnavus ATCC 29149] Length = 624 Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 8/112 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G K G M F + + F GH +S G G A + + Sbjct: 80 LTGRRAGFDDLRKYGGMSGFPKRKESECDAFDTGHS--STSISAGLGYVAARDIKGEEHS 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + GDGA G YE+ N A+ N I V+ +N ++ +V S N Sbjct: 138 VISIIGDGAMTGGMAYEALNNASRLKSNFIIVLNDNNMSISENVGGMSRYLN 189 >gi|116487658|gb|AAI25976.1| LOC780759 protein [Xenopus laevis] Length = 655 Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust. Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 9/150 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ K+ V C GDG ++G V+E+ A + L N++ + Sbjct: 151 GSLGQGLGAACGMAYTGKFFDKASYRVFCLLGDGEVSEGSVWEAMAFAGFYKLDNLVAIF 210 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A C P Sbjct: 211 DVNRLGQSEPAPLQHKVEVYQKRCEAFGWHSLVVDGHSVEEL------CKALCHVKNQPT 264 Query: 276 IIEMLTYRYRGHS-MSDPANYRTREEINEM 304 I T++ +G S + D N+ + E+ Sbjct: 265 AIIAKTFKGKGISGVEDKENWHGKPLPKEL 294 >gi|260060710|ref|YP_003193790.1| 2-oxoglutarate dehydrogenase E1 component [Robiginitalea biformata HTCC2501] gi|88784840|gb|EAR16009.1| 2-oxoglutarate dehydrogenase, E1 component [Robiginitalea biformata HTCC2501] Length = 940 Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust. Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 4/145 (2%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAAL---WNLNVIYVIENNQYAMGTSVSRASAQTN 234 S + +V GD A A QG YE +A L I+++ NNQ T+ T Sbjct: 337 SKVLPIVVHGDAAIAGQGIAYEVVQMAGLDGYGTAGTIHIVVNNQIGFTTNYLDGRTSTY 396 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 + G P + ++ D AV A+ Y + + +++L YR GH+ D Sbjct: 397 CTDVGKVTLSPVLHINADDAEAVVHAALFALEYRMKFRRDVFLDLLGYRKYGHNEGDEPR 456 Query: 295 YRTREEINEMRSNHDPIEQVRKRLL 319 + + + + +P + +RL+ Sbjct: 457 FTQPKLYKAIAKHQNPRDIYAERLM 481 >gi|253581685|ref|ZP_04858909.1| transketolase [Fusobacterium varium ATCC 27725] gi|251836034|gb|EES64571.1| transketolase [Fusobacterium varium ATCC 27725] Length = 272 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 15/160 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + GDG +GQ++E+ AA + L NV ++ Sbjct: 116 GSLGQGLSVANGMALNAKLSGESYRTYIILGDGELQEGQIWEAAMTAAHYKLDNVCAFLD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + +V + + +F +++DG + + + +DKA + KG P Sbjct: 176 FNNLQIDGNVDKIMGIEPVDAKWEAFGWNVIKIDGHNFEEILSALDKA----KEVKGKPT 231 Query: 276 IIEMLTYRYRGHSMSD---------PANYRTREEINEMRS 306 I+ T + +G S + P T + + E+ S Sbjct: 232 IVIAKTVKGKGVSFMENVCGFHGVAPTKEETEKALAELNS 271 >gi|47717729|gb|AAT37907.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Elaeis guineensis] Length = 313 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH NG G G G +S G G+A + Sbjct: 12 ILTGRRDKMHTIRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRKNNV 71 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 72 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 107 >gi|294814965|ref|ZP_06773608.1| Alpha-ketoglutarate decarboxylase [Streptomyces clavuligerus ATCC 27064] gi|294327564|gb|EFG09207.1| Alpha-ketoglutarate decarboxylase [Streptomyces clavuligerus ATCC 27064] Length = 1296 Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 8/127 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A A QG V E+ N++ L ++V+ NNQ +G + + S++++ Sbjct: 706 LPVALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQ--VGFTAAPESSRSSMYA 763 Query: 238 RGVSFNI--PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 V+ I P V+G D A A + + ++I+++ YR RGH+ D + Sbjct: 764 TDVARMIEAPIFHVNGDDPEACVRVARLAFEFRQTFNKDVVIDLICYRRRGHNEGDNPQF 823 Query: 296 RTREEIN 302 + N Sbjct: 824 TNPQMYN 830 >gi|267994440|gb|ACY89325.1| putative transketolase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] Length = 276 Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKI-CVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K RR +++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLARRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 I+ N+ + + + + +F + V G DI + A + Sbjct: 173 IDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAVV 219 >gi|224102539|ref|XP_002312717.1| predicted protein [Populus trichocarpa] gi|222852537|gb|EEE90084.1| predicted protein [Populus trichocarpa] Length = 713 Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH NG G G G +S G G+A + Sbjct: 124 ILTGRRDKMHTIRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRANNV 183 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 184 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 219 >gi|188586311|ref|YP_001917856.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Natranaerobius thermophilus JW/NM-WN-LF] gi|229836068|sp|B2A526|DXS_NATTJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|179350998|gb|ACB85268.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 631 Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 15/116 (12%) Query: 131 GRQGGISKGKGGSMHMFSTKNGFYG---------------GHGIVGAQVSLGTGIAFANK 175 G Q I K G FST F G G G +S G+A A Sbjct: 73 GHQSYIHKILTGRKEQFSTLRQFGGLSGFPKPEESRYDAFGTGHSSTSISAALGMAKARD 132 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + S++ + GDGA G +E+ N A N+ ++ +N+ ++GT+V S+ Sbjct: 133 LQGSNEEVLAVIGDGAMTGGMAFEAMNHAGHEQANMTVILNDNEMSIGTNVGALSS 188 >gi|146103888|ref|XP_001469669.1| 2-oxoglutarate dehydrogenase E1 component [Leishmania infantum] gi|134074039|emb|CAM72780.1| putative 2-oxoglutarate dehydrogenase E1 component [Leishmania infantum JPCM5] Length = 1012 Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 14/146 (9%) Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNL 209 N F G+ QVSLG + R + + GD A A QG +E+ I+ + Sbjct: 390 NPFVQGY-TRAMQVSLG-------EKGREKVLPIEIHGDAAFAGQGVAFETMCISEVGEQ 441 Query: 210 NV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 + ++V+ NNQ T + + + G +N P + V+G V + A Sbjct: 442 DTGGTVHVVCNNQIGFTTDPKSSRSSAYCTDLGRVYNCPILHVNGDYPEEVIRVFEFAAE 501 Query: 267 Y-CRAHKGPIIIEMLTYRYRGHSMSD 291 Y R HK ++I+++ YR GH+ +D Sbjct: 502 YRARFHKS-VVIDLVCYRRFGHNEND 526 >gi|329923791|ref|ZP_08279154.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Paenibacillus sp. HGF5] gi|328940964|gb|EGG37268.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Paenibacillus sp. HGF5] Length = 958 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 7/184 (3%) Query: 175 KYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRAS 230 K+ + + + GD A +G V E+ N L I++I NN+ T + Sbjct: 353 KHDVNKALSIQIHGDSAFPGEGIVPETLNFNKLPAYRTGGSIHIIVNNRIGFTTEGKDSR 412 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 + S + IP + V+ D A A A Y K I+I+++ YR GH+ + Sbjct: 413 STHYASDLAKGYEIPIIHVNADDPEACIAVARLASDYRNKFKKSILIDLVGYRKYGHNET 472 Query: 291 DPANYRTREEINEMRSNHDPIEQV-RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D T+ I + NH + + K+L+ ++ + ++ V +++ NS E ++ Sbjct: 473 DDPE-TTQPLIYQKVKNHPTVSTIYMKKLVDGNILTQEQVDGLKNGVVEVLKNSYENVKT 531 Query: 350 DKEP 353 K+P Sbjct: 532 -KDP 534 >gi|148669686|gb|EDL01633.1| mCG18147 [Mus musculus] Length = 382 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 12/126 (9%) Query: 195 GQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 G V E+F ++ L + + I++I NNQ T R + S G + V+G Sbjct: 1 GIVLETFTLSNLPHFRIGGSIHLIVNNQLGYTTPAERGRSSLYSSDIGKLVGCAIIHVNG 60 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS------MSDPANY---RTREEIN 302 V A Y R + +I+++L YR GH+ ++P Y R R+ I Sbjct: 61 DSPEEVVRATRLAFEYQRQFRKDVIVDLLCYRQWGHNELDEPFFTNPVMYKIIRARKSIP 120 Query: 303 EMRSNH 308 + + H Sbjct: 121 DTYAEH 126 >gi|146329136|ref|YP_001209249.1| 2-oxoglutarate dehydrogenase, E1 component [Dichelobacter nodosus VCS1703A] gi|146232606|gb|ABQ13584.1| 2-oxoglutarate dehydrogenase, E1 component [Dichelobacter nodosus VCS1703A] Length = 917 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%) Query: 179 SDKIC-VVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQT 233 +DK+ ++ GD A + QG E ++ L ++++ NNQ T+ + A + Sbjct: 339 ADKVVPILIHGDAALSGQGINQEVLQLSQLRGYFCGGAVHIVVNNQIGFTTTKTDARSSL 398 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY-CRAHKGPIIIEMLTYRYRGHSMSD- 291 + S P + V+G D AV A AY R HK I I+++ YR GH+ +D Sbjct: 399 YCTDIAKSIQAPVIHVNGDDPEAVFFVAQLAAAYRLRFHKD-IFIDLVCYRRLGHNEADE 457 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 PA T ++ ++ H+ R+ N+ + G L+E Sbjct: 458 PAI--TNPKMYDLIQRHE----TPARIYANQLIAAGALQE 491 >gi|294102371|ref|YP_003554229.1| Transketolase central region [Aminobacterium colombiense DSM 12261] gi|293617351|gb|ADE57505.1| Transketolase central region [Aminobacterium colombiense DSM 12261] Length = 648 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 H+ G G G +G ++ G G A A K R D V GDG +GQV E+ IA Sbjct: 119 HVERNVPGIDWGSGNLGQGLAAGVGFALAQKARAHDGRVFVLMGDGEQTKGQVAEARRIA 178 Query: 205 ALWNL-NVIYVIENNQ 219 A L N+ +I+ N Sbjct: 179 AKEGLSNITALIDYNH 194 >gi|209886012|ref|YP_002289869.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha carboxidovorans OM5] gi|209874208|gb|ACI94004.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha carboxidovorans OM5] Length = 636 Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +GG + F + + F H +S G G+A A + + Sbjct: 85 LTGRRDRIRTLRQGGGLSGFPKRAESEYDAFGTAHS--STSISAGLGMAVARDLQGGNNN 142 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A N +I ++ +N ++ V SA Sbjct: 143 VIAVIGDGSMSAGMAYEAMNNAGALNSRLIVILNDNDMSIAPPVGAMSA 191 >gi|238756027|ref|ZP_04617351.1| 2-oxoglutarate dehydrogenase E1 component [Yersinia ruckeri ATCC 29473] gi|238705752|gb|EEP98145.1| 2-oxoglutarate dehydrogenase E1 component [Yersinia ruckeri ATCC 29473] Length = 936 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 5/164 (3%) Query: 174 NKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRA 229 +K R + + + GD A A QG V E+ N++ V + ++ NNQ TS + Sbjct: 345 DKARSNMVLPITIHGDAAIAGQGVVQETLNMSQARGYEVGGTVRIVINNQIGFTTSNPQD 404 Query: 230 SAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 + T + + P V+ D AV A+ + K ++I+++ YR GH+ Sbjct: 405 ARSTQYCTDIAKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHN 464 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +D + +++ + P + +L K A + D E+ Sbjct: 465 EADEPSATQPVMYQKIKKHPTPRKIYADKLTEQKIAGQEDATEM 508 >gi|170767729|ref|ZP_02902182.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia albertii TW07627] gi|170123217|gb|EDS92148.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia albertii TW07627] Length = 620 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIKPDMLVILNDNEMSISENV 189 >gi|168465951|ref|ZP_02699821.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195631362|gb|EDX49922.1| transketolase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 276 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKI-CVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K RR +++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLARRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 I+ N+ + + + + +F + V G DI + A + Sbjct: 173 IDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAVV 219 >gi|160937923|ref|ZP_02085281.1| hypothetical protein CLOBOL_02817 [Clostridium bolteae ATCC BAA-613] gi|158439149|gb|EDP16903.1| hypothetical protein CLOBOL_02817 [Clostridium bolteae ATCC BAA-613] Length = 277 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K R D V GDG +G V+E A+ + L N+ V++ Sbjct: 113 GSLGHGLPVCVGMAMAGKMDRKDYRVYVVMGDGELAEGSVWEGAMAASHYCLDNLCAVVD 172 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKA 264 N+ + + +R SF + V DG DI + A ++A Sbjct: 173 RNRLQISGCTEDVMGHDDLHERFRSFGWHVIDVADGNDIDQLDAAFEEA 221 >gi|119897489|ref|YP_932702.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azoarcus sp. BH72] gi|166198599|sp|A1K4R0|DXS_AZOSB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|119669902|emb|CAL93815.1| probable 1-deoxy-D-xylulose 5-phosphate synthase [Azoarcus sp. BH72] Length = 619 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 35/176 (19%), Positives = 68/176 (38%), Gaps = 48/176 (27%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G+A A + R D+ + GDGA + G +E+ N A + N++ ++ +N+ ++ Sbjct: 123 ISAALGMAVAARDRGEDRRAIAVIGDGAMSAGMAFEALNNAGDMDANLLVILNDNEMSIS 182 Query: 224 TSVSRASAQTNFSKRGVSFN------------IPGM------------------------ 247 V + G ++N +P M Sbjct: 183 PPVGALTKILARLMSGSTYNAARRVGEKVLGTVPPMAELARKVEEYAKGMIAPGTLFEEF 242 Query: 248 ------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANY 295 +DG D+ A+ T+ R KGP + ++T + +G+ + +DP Y Sbjct: 243 GFHYYGPIDGHDLDALIPTLQN----IRKLKGPQFLHVITKKGQGYKLAEADPILY 294 >gi|325661671|ref|ZP_08150294.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium 4_1_37FAA] gi|325471924|gb|EGC75139.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium 4_1_37FAA] Length = 603 Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G K G M F + + F GH +S G G A + D Sbjct: 59 LTGRKAGFDDLRKYGGMSGFPKRKESDCDAFDTGHS--STSISAGLGYVEAREILGQDHK 116 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + GDGA G YE+ N AA N I V+ +N ++ +V Sbjct: 117 VISVIGDGAMTGGMAYEALNNAAGLKSNFIIVLNDNNMSISENV 160 >gi|282866524|ref|ZP_06275567.1| deoxyxylulose-5-phosphate synthase [Streptomyces sp. ACTE] gi|282558571|gb|EFB64130.1| deoxyxylulose-5-phosphate synthase [Streptomyces sp. ACTE] Length = 638 Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 51/167 (30%) Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESF-NIAALWNLNVIYVIENNQYAMGTS-- 225 G+A AN+ R+ D V GDGA G +E+ NIAA + ++ V+ +N+ + + Sbjct: 124 GLAKANEVRKKDDHVVAVIGDGALTGGMAWEALNNIAAAKDRPLVIVVNDNERSYAPTIG 183 Query: 226 -------------------------------VSRASAQT-NFSKRGV-SFNIP-GM---- 247 V R +T + +K+G+ F P GM Sbjct: 184 GLANHLATLRTTDGYERFLARGKDILERTPVVGRPLYETLHGAKKGLKDFIAPQGMFEDL 243 Query: 248 ------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 +DG DI A+++ + +A + GP+I+ +T + RG++ Sbjct: 244 GLKYVGPIDGHDIEALESALQRAKRF----GGPVIVHCITEKGRGYT 286 >gi|163752591|ref|ZP_02159771.1| 2-oxoglutarate dehydrogenase, E1 component [Shewanella benthica KT99] gi|161327520|gb|EDP98726.1| 2-oxoglutarate dehydrogenase, E1 component [Shewanella benthica KT99] Length = 932 Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+FN++ V I ++ NNQ TS T + + Sbjct: 358 LPITIHGDAAITGQGIVQETFNMSQTRGFKVGGSIRIVINNQVGFTTSNQEDIRSTEYCT 417 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV AV Y K ++I+++ YR GH+ +D Sbjct: 418 DIAKMVQAPIFHVNADDPEAVAFISQLAVDYRNEFKRDVVIDLVCYRRHGHNEAD 472 >gi|145652154|gb|ABP88135.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays] Length = 705 Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +LG +A R++ I V+ GDGA GQ YE+ N + Sbjct: 164 SAHDAFGVGHSSTSISAALGMAVARDLLGRKNHVISVI--GDGAMTAGQAYEAMNNSGYL 221 Query: 208 NLNVIYVIENNQ 219 + N+I V+ +N+ Sbjct: 222 DANMIVVLNDNK 233 >gi|91215238|ref|ZP_01252210.1| transketolase, N-terminal subunit [Psychroflexus torquis ATCC 700755] gi|91186843|gb|EAS73214.1| transketolase, N-terminal subunit [Psychroflexus torquis ATCC 700755] Length = 281 Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 3/126 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G A K + + GDG +GQ +E+ A + N+I I+ Sbjct: 118 GSLGQGMSVAIGAAQTKKLNKDTHLIYSLHGDGELQEGQNWEAILYAGSKGVDNLIATID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD-GMDIRAVKATMDKAVAYCRAHKGPI 275 N+ + + N K+ +F+ +++ G DI A+K ++KA K P+ Sbjct: 178 YNKKQIDGATDDVLPLGNLKKKFEAFDWKVIELKAGNDITAIKEALEKAKGLT-GKKQPV 236 Query: 276 IIEMLT 281 +I M T Sbjct: 237 VILMET 242 >gi|67906635|gb|AAY82730.1| predicted 1-deoxy-d-xylulose-5-phosphate synthase [uncultured bacterium eBACmed86H08] Length = 635 Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +G + F+ + + F H +S GIA ANK + + Sbjct: 84 LTGRKNRIKTLRQGDGLSGFTKRSESEYDPFGAAHS--STSISAALGIATANKLSKKSEN 141 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA + G YE+ N A +I ++ +N ++ V Sbjct: 142 VVAVIGDGAISAGMAYEAMNNAGTSKTKMIVILNDNDMSIAEPV 185 >gi|58336694|ref|YP_193279.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus acidophilus NCFM] gi|227903256|ref|ZP_04021061.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus acidophilus ATCC 4796] gi|58254011|gb|AAV42248.1| 1-deoxyxylulose-5-phosphate synthase [Lactobacillus acidophilus NCFM] gi|227869061|gb|EEJ76482.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus acidophilus ATCC 4796] Length = 580 Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 14/144 (9%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G ++L TG+A A + + GDG+ G YE N AA+ N++ Sbjct: 115 YYAVGHTSTSIALATGMAKARDLMGEHENIMALIGDGSMTGGLAYEGLNNAAIEPHNLVV 174 Query: 214 VIENNQYAMGTSVS------RASAQTNFSKRGVSFNIPGMQ----VDGMDIRAVKATMDK 263 V+ +NQ ++ +V + +N + F G DG DI+ +M + Sbjct: 175 VVNDNQMSIDDNVGGLVTALKKLRDSNGETKENPFTAMGFDYRYIADGNDIK----SMIE 230 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGH 287 A + PI++ + T + +G+ Sbjct: 231 AFKAVKDVDHPILLHINTLKGKGY 254 >gi|293610797|ref|ZP_06693097.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827141|gb|EFF85506.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 637 Score = 39.3 bits (90), Expect = 1.00, Method: Compositional matrix adjust. Identities = 48/219 (21%), Positives = 90/219 (41%), Gaps = 35/219 (15%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEE-KAGQLYGM 75 L + +R T +D +D P Q+L L++ +E + LY Sbjct: 5 LYTEIPTQRPVTPLLDAIDHP-------------QQLRQLEHSQLVQVADELRQYILYAA 51 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGR 132 G GG +G + V + T D+++ ++ + H + LTGR Sbjct: 52 GQSGGHFGANLGVVELTVALHYCFNTPNDRLVWDVGHQAYPHKV------------LTGR 99 Query: 133 QGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCF- 187 + ++ + K G + + + G+ +S G G++ A +Y+ +D VVC Sbjct: 100 REQMTTIRAKNGLAAFPAREESVFDTFGVGHSSTAISAGLGMSLARRYQ-NDPCEVVCIV 158 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GDGA G +E+ N A + ++I V+ +N ++ S Sbjct: 159 GDGAMTAGMAFEAMNDAVAHDADLIVVLNDNDMSISCST 197 >gi|170749409|ref|YP_001755669.1| transketolase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170655931|gb|ACB24986.1| Transketolase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 287 Score = 39.3 bits (90), Expect = 1.00, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 7/119 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A K +RS F DG N+G +E+ A + L N+I +++ Sbjct: 127 GSLGHGLGIAVGMALGLKRKRSRSFVYNLFSDGELNEGSTWEAAMSAGSFRLNNLIGLVD 186 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 N A G S + + + +FN +VDG DI T+ +A R H GP Sbjct: 187 VNGMQADGASTGVLDFEP-LAPKFEAFNWFVQRVDGNDI----DTLVRAFDAARDHPGP 240 >gi|121604758|ref|YP_982087.1| 2-oxoglutarate dehydrogenase E1 component [Polaromonas naphthalenivorans CJ2] gi|120593727|gb|ABM37166.1| 2-oxoglutarate dehydrogenase E1 component [Polaromonas naphthalenivorans CJ2] Length = 963 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%) Query: 177 RRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 RR+D + V+ GD A A QG V E+ +A + ++++ NNQ TS Sbjct: 355 RRADPKGLQVLPVLVHGDAAFAGQGVVMETLALAETRGYSTGGTVHLVINNQIGFTTSDP 414 Query: 228 RASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S T + V P + V+G D AV A+ + + ++++++ +R G Sbjct: 415 RDSRSTLYCTDVVKMIEAPVLHVNGDDPEAVVLATQLALEFRMEFQKDVVVDIICFRKLG 474 Query: 287 HSMSD-PA 293 H+ D PA Sbjct: 475 HNEQDTPA 482 >gi|325168807|ref|YP_004280597.1| transketolase, N-terminal subunit [Agrobacterium sp. H13-3] gi|325064530|gb|ADY68219.1| transketolase, N-terminal subunit [Agrobacterium sp. H13-3] Length = 269 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 9/134 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K +D V GDG +G +E+ AA + L N+ +I+ Sbjct: 115 GPLGHGLPVAVGMAKAAKLLGADYHTYVMTGDGEMQEGSNWEAIMSAAQFELNNLTLIID 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N++ G ++S +TN V+ P ++ G ++ + + + H+G Sbjct: 175 HNRFQQGAAIS----ETN----DVAPLRPKLEAFGWEVSEINGNAMEEIVPALEHRGERP 226 Query: 277 IEMLTYRYRGHSMS 290 ++ + +GH +S Sbjct: 227 HCIVAHTNKGHGIS 240 >gi|302878314|ref|YP_003846878.1| Transketolase domain-containing protein [Gallionella capsiferriformans ES-2] gi|302581103|gb|ADL55114.1| Transketolase domain-containing protein [Gallionella capsiferriformans ES-2] Length = 269 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 16/130 (12%) Query: 147 FSTKNGFYGGH-------------GIVGAQVSLGTGIAFANKYR-RSDKICVVCFGDGAA 192 F +N GGH G +G + +G G+A A + R K+ VV GDG Sbjct: 88 FCKRNAMLGGHPEAGKIPGVEASTGSLGHGMPIGLGMALAARMAGRGSKVFVV-VGDGEI 146 Query: 193 NQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 N+G V+E+ A L N +I+ N+ + + + SF +V+G Sbjct: 147 NEGSVWEAALCAGKHALDNYTVLIDYNKIQASGPTADIQDLEPLTDKWRSFGFAVTEVNG 206 Query: 252 MDIRAVKATM 261 D+ A++ T+ Sbjct: 207 HDVVALRRTL 216 >gi|241765610|ref|ZP_04763566.1| deoxyxylulose-5-phosphate synthase [Acidovorax delafieldii 2AN] gi|241364578|gb|EER59638.1| deoxyxylulose-5-phosphate synthase [Acidovorax delafieldii 2AN] Length = 630 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 14/107 (13%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS G S + F H +S G+A A K + Sbjct: 86 LTGRRDRMSTLRQLGGIS---GFPQRTESAYDTFGTAHS--STSISAALGMALAAKRKGE 140 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 ++ V GDGA G +E+ N A + + N++ ++ +N ++ V Sbjct: 141 ERHVVAIIGDGAMTAGMAFEALNNAGVADANLLVILNDNDMSISPPV 187 >gi|108562784|ref|YP_627100.1| transketolase [Helicobacter pylori HPAG1] gi|107836557|gb|ABF84426.1| transketolase A [Helicobacter pylori HPAG1] Length = 642 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 14/129 (10%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A + L Sbjct: 121 GPLGQGFANAVGFSMASRYAQNLLDKKAISHKVYCLC-GDGDLQEGISYESASLAGHFRL 179 Query: 210 -NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 N+I + ++NQ ++ ++ S R ++ N ++ DG D +A+ +++A Sbjct: 180 DNLIVIYDSNQISIEGAID-ISFSEQVKTRFLAQNWEVLECDGHDYQAIHNALEEAK--- 235 Query: 269 RAHKGPIII 277 ++HK ++I Sbjct: 236 KSHKPTLLI 244 >gi|113473649|gb|ABI35993.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Catharanthus roseus] Length = 740 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 73/190 (38%), Gaps = 16/190 (8%) Query: 35 DIPFLEGFEVSEFNKE-QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 D PF + + + LS L L E+ +Y + GG +G + V Sbjct: 90 DKPFTPILDTINYPTHMKNLSLQELQQLADELREEI--VYSVAKTGGHLSSSLGVAELTV 147 Query: 94 GMKMSL-TEGDQMI--TAYREHGHILACGVDAS-KIMAELTGRQGGISKGKGGSMHMFST 149 + T D++I ++ +GH + G + M + G G + + S Sbjct: 148 ALHHVFETPNDKIIWDVGHQTYGHKILTGRRSKMHTMRQTCGLAGFPKRDE-------SA 200 Query: 150 KNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL 209 + F GH +S G G+A + GDGA GQ YE+ N A + Sbjct: 201 HDAFGVGHS--STSISAGLGMAIGRDLLGKKNHVITVIGDGAMTAGQAYEAMNNAGYLDS 258 Query: 210 NVIYVIENNQ 219 N+I ++ +N+ Sbjct: 259 NLIIILNDNK 268 >gi|154346104|ref|XP_001568989.1| 2-oxoglutarate dehydrogenase E1 component [Leishmania braziliensis MHOM/BR/75/M2904] gi|134066331|emb|CAM44122.1| putative 2-oxoglutarate dehydrogenase E1 component [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1012 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 12/145 (8%) Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNL 209 N F G+ QVSLG + R + + GD A + QG +E+ I+ + L Sbjct: 390 NPFVQGY-TRAMQVSLG-------EKGRETVLPIEIHGDAAFSGQGVAFETMCISEVGEL 441 Query: 210 NV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 + ++V+ NNQ T + + + G +N P + V+G V + A Sbjct: 442 HTGGTVHVVCNNQIGFTTDPKSSRSSAYCTDLGRVYNCPILHVNGDYPEEVVRVFEFAAE 501 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSD 291 Y ++I+++ YR GH+ +D Sbjct: 502 YRARFSKSVVIDLVCYRRFGHNEND 526 >gi|225569681|ref|ZP_03778706.1| hypothetical protein CLOHYLEM_05775 [Clostridium hylemonae DSM 15053] gi|225161151|gb|EEG73770.1| hypothetical protein CLOHYLEM_05775 [Clostridium hylemonae DSM 15053] Length = 280 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A K + D GDG +GQV+E+ A + L N+ ++ Sbjct: 118 GSLGQGLSAAVGMALCGKVDKKDYRVFAALGDGEIQEGQVWEAAMAAGNYGLDNLTVFVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 NN + +V + + +F + +DG D + +D+A Sbjct: 178 NNNLQIDGTVEEVMSPYPIEDKFRAFKWNVITIDGHDHGQIARAVDEA 225 >gi|254465095|ref|ZP_05078506.1| transketolase [Rhodobacterales bacterium Y4I] gi|206686003|gb|EDZ46485.1| transketolase [Rhodobacterales bacterium Y4I] Length = 673 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 13/142 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNL- 209 G +G +S G A A + +R+ D V GDG +G E+ +A L Sbjct: 124 GPLGQGISNAVGFAMAEEMQRAHYGKKVVDHYTYVIAGDGCLMEGISQEAIGLAGRHQLG 183 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 +I +NN + +V S +TN +R + +++DG D +A+ D+A+ + Sbjct: 184 KLIVFWDNNNITIDGTVD-LSDRTNQVQRFKASGWQVLEIDGHDPKAI----DEAIEAAK 238 Query: 270 AHKGPIIIEMLTYRYRGHSMSD 291 K P +I T+ GH+ D Sbjct: 239 KSKKPSMIACKTHIALGHAAQD 260 >gi|1729977|sp|P50137|TKT_RAT RecName: Full=Transketolase; Short=TK Length = 623 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A ++ L N++ + Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGEVSEGSVWEAMAFAGIYKLDNLVAIF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSDPAPLQHQVDVYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|255524167|ref|ZP_05391127.1| deoxyxylulose-5-phosphate synthase [Clostridium carboxidivorans P7] gi|296186625|ref|ZP_06855027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium carboxidivorans P7] gi|255512152|gb|EET88432.1| deoxyxylulose-5-phosphate synthase [Clostridium carboxidivorans P7] gi|296048662|gb|EFG88094.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium carboxidivorans P7] Length = 620 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 52/185 (28%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +S G+A A +R V GDGA G E+ N A +I Sbjct: 112 FETGHS--STSISAALGMARARDLKRETHEVVAVIGDGALTGGMALEALNDAGYRKTKLI 169 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFN----------------------------- 243 ++ +NQ ++G +V S N + +N Sbjct: 170 IILNDNQMSIGKNVGGVSKYLNKIRIDPKYNKFKLEVENTLKKIPNIGRGMAKYLERIKN 229 Query: 244 ------IPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +PGM VDG +++ + + KA + K P+II ++T + +G Sbjct: 230 GIKQMIVPGMFFEDMGIKYLGPVDGHNLKELTEVLSKA----KNIKEPVIIHVITKKGKG 285 Query: 287 HSMSD 291 + ++ Sbjct: 286 YEFAE 290 >gi|91762254|ref|ZP_01264219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter ubique HTCC1002] gi|91718056|gb|EAS84706.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter ubique HTCC1002] Length = 637 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 74/306 (24%), Positives = 114/306 (37%), Gaps = 66/306 (21%) Query: 35 DIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG 94 DI F N QE+S +I E G L G G+ G L + V Sbjct: 9 DINFPSDLRKLSENDLQEVSNEVRKEMIDAVSETGGHL-GAGL--GVVELTVALHYVFD- 64 Query: 95 MKMSLTEGDQMI--TAYREHGHILACGVDASKIMAELTGRQG-GISKGKGGSMHMFSTKN 151 T D++I ++ + H + G SKI T RQG G+S G + S + Sbjct: 65 -----TPNDRLIWDVGHQTYPHKILTG-RKSKIK---TLRQGNGLS---GFTKRSESEYD 112 Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 F H +S G+A ANK + GDGA + G YE+ N A + Sbjct: 113 PFGAAHS--STSISSALGMAEANKLSNKSSNIIAVIGDGAISAGMAYEAMNNAGASKTKM 170 Query: 212 IYVIENNQYAMGTSVS------------------RASAQ---TNFSKR------------ 238 I ++ +N ++ V R + + + FSKR Sbjct: 171 IVILNDNDMSIAKPVGAMRTYLAKLLTGKIYFSLRETFKLIVSAFSKRFSAKAGKAEDFL 230 Query: 239 ------GVSFNIPGM----QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 G FN G +DG D+ + + A H+GPI+I + T + +G+S Sbjct: 231 RSAVTGGTLFNSLGFYYVGPIDGHDLSTLIPILKN--ARDSKHQGPIMIHIKTQKGKGYS 288 Query: 289 MSDPAN 294 ++ A+ Sbjct: 289 YAEKAS 294 >gi|157823833|ref|NP_001099550.1| transketolase-like protein 2 [Rattus norvegicus] gi|149016823|gb|EDL75962.1| transketolase-like 2 (predicted) [Rattus norvegicus] Length = 627 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+ A+ + L N++ + Sbjct: 125 GSLGQGLGAACGMAYTGKYFDKASYRVFCLMGDGESSEGSVWEALAFASHYKLDNLLAIF 184 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + + R +F VDG D+ A+ KA + P Sbjct: 185 DVNRLGQSGTAPLEHCTDIYETRCQAFGWNTYVVDGHDVEALCQAFWKAA---QVKNKPT 241 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 242 ALIAKTFKGRG 252 >gi|124558735|gb|ABN13970.1| 1-deoxy-D-xylulose 5-phosphate synthase [Gossypium barbadense] Length = 720 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH NG G G G +S G G+A + Sbjct: 150 ILTGRRHKMHTMRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGERNHV 209 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 210 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 245 >gi|172056945|ref|YP_001813405.1| deoxyxylulose-5-phosphate synthase [Exiguobacterium sibiricum 255-15] gi|229813276|sp|B1YLQ5|DXS_EXIS2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|171989466|gb|ACB60388.1| deoxyxylulose-5-phosphate synthase [Exiguobacterium sibiricum 255-15] Length = 628 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 36/178 (20%), Positives = 70/178 (39%), Gaps = 53/178 (29%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S GIA +N+ + +D + GDGA G E+ N NVI ++ +N+ ++ Sbjct: 119 LSAAMGIAVSNELKGNDDRAIAIIGDGALTGGMALEALNHIGAEQQNVIVILNDNEMSIA 178 Query: 224 TSVS---------RASAQTNFSKRGVSFNI--------------------------PGM- 247 +V R+S + +++ + I PGM Sbjct: 179 PNVGAMHQMLGRIRSSRKVRYAQDELETLIKKIPLIGGKLEKGGEKLKEAVKGALVPGMF 238 Query: 248 ----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANY 295 VDG D+ + ++ Y + +GP+++ ++T + +G+ PA Y Sbjct: 239 FEELGFNYYGPVDGHDLTDLIEQLN----YVKKEEGPVLLHVITKKGKGYR---PAEY 289 >gi|254498641|ref|ZP_05111359.1| alpha-ketoglutarate decarboxylase [Legionella drancourtii LLAP12] gi|254352089|gb|EET10906.1| alpha-ketoglutarate decarboxylase [Legionella drancourtii LLAP12] Length = 915 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 11/140 (7%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNL---NVIYVIENNQYAMGTSVSRASAQ 232 ++ + +V GD A A QG V E+FN + ++++ NNQ TS + Sbjct: 325 KKDSVVPIVIHGDAAFAGQGVVMETFNFSQARGYATGGTVHIVINNQIGFTTSNPLDARS 384 Query: 233 TNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 T + + P + V+G D AV A + ++I+++ YR GH+ +D Sbjct: 385 TMYCTDVAKMVQAPVIHVNGDDPEAVVFATQIAFEFRMKFNRDVVIDLVCYRRHGHNEAD 444 Query: 292 ------PANYRTREEINEMR 305 P Y+ + + +R Sbjct: 445 EPAVTQPEMYKKIKSMRPLR 464 >gi|238920749|ref|YP_002934264.1| 2-oxoglutarate dehydrogenase E1 component [Edwardsiella ictaluri 93-146] gi|238870318|gb|ACR70029.1| oxoglutarate dehydrogenase [Edwardsiella ictaluri 93-146] Length = 935 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 11/160 (6%) Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK---ICVVCFGDGA-ANQG 195 +GG +H+ F H + + V +G+ A ++ R+ + + GD A A QG Sbjct: 310 EGGPVHL---ALAFNPSHLEIVSPVVMGSVRARRDRLDRTRSDIVLPITIHGDAAVAGQG 366 Query: 196 QVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDG 251 V E+ N++ V + ++ NNQ TS + T + + G P V+ Sbjct: 367 IVQETLNMSQARGYEVGGTVRIVINNQIGFTTSNPLDARSTQYCTDIGKMVQAPIFHVNA 426 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 D AV A+ + K + I+++ YR GH+ +D Sbjct: 427 DDPEAVAFVTRLALDFRNCFKRDVFIDLVCYRRHGHNEAD 466 >gi|283797527|ref|ZP_06346680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium sp. M62/1] gi|291074896|gb|EFE12260.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium sp. M62/1] Length = 631 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 73/203 (35%), Gaps = 54/203 (26%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A R + + GDGA G YE+ N AA Sbjct: 105 SPFDAFDTGHS--STSISAGLGMALGRDVRGENYSVISVIGDGALTGGMAYEALNNAAQI 162 Query: 208 NLNVIYVIENNQYAMGTSVS---------RASAQTNFSKRGV------------------ 240 N I V+ +N ++ +V RA N K+ V Sbjct: 163 KKNFIIVLNDNNMSISKNVGGISRYLSNLRADEGYNELKKSVVAALRSIPMVGNGMVQTL 222 Query: 241 --------SFNIPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 IPGM VDG D+R + +A RA ++I +LT Sbjct: 223 TRTKNGIKQLFIPGMWFENMGVTYIGPVDGHDVRQLVKIFREAKKMDRA----VLIHVLT 278 Query: 282 YRYRGHSMSD--PANYRTREEIN 302 + +G+ ++ P+ + E N Sbjct: 279 KKGKGYQPAEKNPSAFHGVEPFN 301 >gi|188588475|ref|YP_001920752.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum E3 str. Alaska E43] gi|188498756|gb|ACD51892.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum E3 str. Alaska E43] Length = 586 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 26/177 (14%) Query: 129 LTGRQGG-ISKGKGGSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I+ + S+ ++++N F GH +SL G+A A ++ Sbjct: 83 LTGRKNAFINPDEYRSVTGYTSQNESEHDFFTVGH--TSTSISLACGLAKARDVKKGKGN 140 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS------------VSRAS 230 + GDG+ + GQ YE N A+ N+I ++ +N ++ + + Sbjct: 141 IIAVIGDGSLSGGQAYEGLNNASASGKNIIILVNDNDMSIAENHGGLYQNLDLLRKTNGK 200 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 A+ NF K + F ++ DG DI ++ T + + P+++ + T + +G+ Sbjct: 201 AENNFFK-SLGFEYHYVK-DGNDIESLIETFSR----VKDIDHPVVVHIHTVKGKGY 251 >gi|157146964|ref|YP_001454283.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citrobacter koseri ATCC BAA-895] gi|166198610|sp|A8AK34|DXS_CITK8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|157084169|gb|ABV13847.1| hypothetical protein CKO_02741 [Citrobacter koseri ATCC BAA-895] Length = 620 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIKPDMLVILNDNEMSISENV 189 >gi|92116388|ref|YP_576117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter hamburgensis X14] gi|118595592|sp|Q1QQ40|DXS_NITHX RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|91799282|gb|ABE61657.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter hamburgensis X14] Length = 668 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 8/109 (7%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + GG + F+ + + F H SLG +A +++ I Sbjct: 113 LTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISASLGMAVARDLSGGKNNVI 172 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 V+ GDGA + G YE+ N A N +I ++ +N ++ V SA Sbjct: 173 AVI--GDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSA 219 >gi|58584652|ref|YP_198225.1| alpha-ketoglutarate decarboxylase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418968|gb|AAW70983.1| 2-oxoglutarate dehydrogenase complex, E1 component [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 887 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 6/162 (3%) Query: 188 GDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 GD A QG V E+ ++ + V ++V+ NNQ + A + + + S Sbjct: 302 GDAAFIGQGVVGETLTLSNIEGYKVDGIVHVVINNQVGFTANPCCARSSSYCTDVIKSIE 361 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINE 303 P V G AV A+ Y + K ++I+++ YR GH+ D N+ T+ + + Sbjct: 362 APVFHVSGDSPEAVNFVAGLAMEYRQKFKKDVVIDIICYRKYGHNEGDEPNF-TQPLMYK 420 Query: 304 MRSNHD-PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 + SNH P ++L +K S ++ ++ R ++ S+ Sbjct: 421 IISNHKTPGTLYEEKLTADKVLSGDEVDKLRSKFRARLDKSL 462 >gi|229554731|gb|ACQ76754.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacopa monnieri] Length = 121 Score = 39.3 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A V GDGA GQ YE+ N A Sbjct: 17 SAYDAFGVGHS--STSISAGLGMAIARDLLGKHNNVVSVIGDGAMTAGQAYEAMNNAGFL 74 Query: 208 NLNVIYVIENNQ 219 + N+I V+ +N+ Sbjct: 75 DSNLIVVLNDNK 86 >gi|162456750|ref|YP_001619117.1| transketolase [Sorangium cellulosum 'So ce 56'] gi|161167332|emb|CAN98637.1| tkt2 [Sorangium cellulosum 'So ce 56'] Length = 570 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 5/134 (3%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + +G GIA + KY ++ V GD ++G ++E+F+ A L N+I ++ Sbjct: 64 GSLGQGLPVGVGIALSGKYLEKAPYRVWVLLGDSEMSEGSIWEAFDHARHTKLGNLIAIL 123 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ R +F +++DG D A+ +A+ A P Sbjct: 124 DMNRLGQRGQTPLGWDSAAYAARARAFGWRALEIDGHDPAAISGAYAEALG---ASDAPA 180 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S+ Sbjct: 181 LIVARTVKGKGVSL 194 >gi|149034222|gb|EDL88992.1| transketolase, isoform CRA_b [Rattus norvegicus] Length = 623 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A ++ L N++ + Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGEVSEGSVWEAMAFAGIYKLDNLVAIF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSDPAPLQHQVDVYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|257077027|ref|ZP_05571388.1| 2-oxoacid ferredoxin oxidoreductase subunit beta [Ferroplasma acidarmanus fer1] Length = 285 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 7/98 (7%) Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG 195 IS G G S +M N YG HG+ G + + GI +ANK + V+ +G Sbjct: 44 ISSGIGCSSNMPEFINT-YGFHGLHGRSLPVAEGIKWANK-----NLTVIAYGGDGDGFF 97 Query: 196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 + + F AA N+N+ Y++ +NQ G + +AS T Sbjct: 98 EGSQHFYHAAKRNVNMTYMVSDNQ-VFGLTTGQASPTT 134 >gi|40317612|gb|AAP14354.2| 1-deoxy-D-xylulose-5-phosphate synthase [Andrographis paniculata] Length = 585 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 3/85 (3%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +LG + + + I V+ GDGA GQ YE+ N A Sbjct: 39 SPYDAFGAGHSSTSISAALGMAVGRDLLGKSNHVISVI--GDGAMTAGQAYEAMNNAGFL 96 Query: 208 NLNVIYVI-ENNQYAMGTSVSRASA 231 + N+I V+ +NNQ ++ T+ A Sbjct: 97 DSNLIIVLNDNNQVSLPTATVDGPA 121 >gi|323487295|ref|ZP_08092595.1| hypothetical protein HMPREF9474_04346 [Clostridium symbiosum WAL-14163] gi|323399340|gb|EGA91738.1| hypothetical protein HMPREF9474_04346 [Clostridium symbiosum WAL-14163] Length = 300 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 8/150 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + GDG +GQV+E+ A L N++ +++ Sbjct: 115 GSLGQGISAAVGMALAAKMDGAAYRVYALLGDGELQEGQVWEAAMFAGYRELDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + S+ + ++ +FN + V DG D+ A + +A KG P Sbjct: 175 NNNLQIDGSIDEVCSAYPIDEKFKAFNFHVICVEDGNDM----AQLHEAFLEAAKVKGKP 230 Query: 275 IIIEMLTYRYRGHS-MSDPANYRTREEINE 303 I T + +G S M D A++ + +E Sbjct: 231 TAIIAETIKGKGISFMEDKASWHGKAPNDE 260 >gi|171915634|ref|ZP_02931104.1| deoxyxylulose-5-phosphate synthase [Verrucomicrobium spinosum DSM 4136] Length = 628 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 35/71 (49%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G G +S G+A R SD+ V GD A G +E+ N AA +I V+ Sbjct: 112 GAGHAGTALSAALGMAVGRDLRGSDEHVVCVAGDAAFTCGPTFEALNNAAAQTKRLIVVL 171 Query: 216 ENNQYAMGTSV 226 +N++++ +V Sbjct: 172 NDNEWSIDRNV 182 >gi|85717532|ref|ZP_01048477.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter sp. Nb-311A] gi|85695649|gb|EAQ33562.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter sp. Nb-311A] Length = 642 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 8/109 (7%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + GG + F+ + + F H SLG +A +++ I Sbjct: 87 LTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISASLGMAVARDLSGGKNNVI 146 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 V+ GDGA + G YE+ N A N +I ++ +N ++ V SA Sbjct: 147 AVI--GDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSA 193 >gi|189346702|ref|YP_001943231.1| transketolase [Chlorobium limicola DSM 245] gi|189340849|gb|ACD90252.1| Transketolase domain protein [Chlorobium limicola DSM 245] Length = 305 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 9/128 (7%) Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNF 235 R S C++ GDG +GQ++E AA + L N+I +++ N + V + F Sbjct: 157 RTSRVFCLM--GDGECQEGQIWEGAMSAAHYGLGNLIGIVDYNNQQIDGEVDKVMNIEPF 214 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG-----HSMS 290 + + +F DG DI V AT+D + K P ++ T +G SM+ Sbjct: 215 ADKWRAFGWNVFSCDGNDIEDVIATID-GIFSMTDRKNPSVVLASTIMGKGVPFFEGSMA 273 Query: 291 DPANYRTR 298 D +N+ + Sbjct: 274 DGSNWHGK 281 >gi|289423090|ref|ZP_06424905.1| 1-deoxy-D-xylulose-5-phosphate synthase [Peptostreptococcus anaerobius 653-L] gi|289156421|gb|EFD05071.1| 1-deoxy-D-xylulose-5-phosphate synthase [Peptostreptococcus anaerobius 653-L] Length = 654 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 8/100 (8%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+GG + G S + F GH VS G+A A + D Sbjct: 82 LTGRKGGFDSLRQYRGMSGFPKESESDHDAFDTGHS--STSVSAALGMAVARDIKGEDNQ 139 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + GDGA G +E+ N N+I V +N+ ++ Sbjct: 140 VIAVIGDGAITGGMAFEALNNLGFTKKNMIVVFNDNEMSI 179 >gi|297470404|ref|XP_002683931.1| PREDICTED: putative chloroplast 1-deoxy-D-xylulose 5-phosphate synthase-like, partial [Bos taurus] gi|296491818|gb|DAA33851.1| putative chloroplast 1-deoxy-D-xylulose 5-phosphate synthase-like [Bos taurus] Length = 409 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 34/63 (53%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G+A A K + ++ V GDGA + G +E+ N A + + N++ V+ +N ++ Sbjct: 42 ISAALGMALAAKRKGDNRHAVAIIGDGAMSAGMAFEALNNAGVADCNLLVVLNDNDMSIS 101 Query: 224 TSV 226 V Sbjct: 102 PPV 104 >gi|269837890|ref|YP_003320118.1| deoxyxylulose-5-phosphate synthase [Sphaerobacter thermophilus DSM 20745] gi|269787153|gb|ACZ39296.1| deoxyxylulose-5-phosphate synthase [Sphaerobacter thermophilus DSM 20745] Length = 629 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +LG +A K R + V+ GDGA G YE+ N A Sbjct: 106 SPHDHFGAGHASTSISAALGMAVAGRLKGERFHTVAVI--GDGALTGGMAYEALNNAGSL 163 Query: 208 NLNVIYVIENNQYAMGTSV 226 + +I V+ +N+ ++ +V Sbjct: 164 QVPLIVVLNDNEMSIAPNV 182 >gi|229825481|ref|ZP_04451550.1| hypothetical protein GCWU000182_00841 [Abiotrophia defectiva ATCC 49176] gi|229790044|gb|EEP26158.1| hypothetical protein GCWU000182_00841 [Abiotrophia defectiva ATCC 49176] Length = 629 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 33/71 (46%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G VS G+ A R + + V GDGA G E+ N A N N+I ++ Sbjct: 112 GTGHASTSVSAALGMVAARDLRNTKEKVVAVIGDGAMTGGMALEALNNAGTLNSNLIIIL 171 Query: 216 ENNQYAMGTSV 226 +N+ ++ +V Sbjct: 172 NDNERSISRNV 182 >gi|167854994|ref|ZP_02477768.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parasuis 29755] gi|167853842|gb|EDS25082.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parasuis 29755] Length = 615 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 26/172 (15%) Query: 136 ISKGKGGSMHMFSTKNGFYG--------------GHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH K+G + GH +S G GIA A + + + Sbjct: 84 ILTGRRDQMHTIRQKDGLHPFPWREESPFDVLSVGHS--STSISAGLGIAVAAEKENAGR 141 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 V GDGA G +E+ N A + N++ ++ +N+ ++ +V A N R + Sbjct: 142 KTVCVIGDGAITAGMAFEAINHAGSIHTNMLVILNDNEMSISENV---GALNNHLARLFT 198 Query: 242 FNIPGMQVDG-----MDIRAVKATMDKAVAYCRAHKGPI--IIEMLTYRYRG 286 ++ G +G I ++K + K + + P+ + E L + Y G Sbjct: 199 GSLYGTLREGGKKLLSGIPSIKEFVRKTEEHVKGFVSPVGTMFETLGFNYIG 250 >gi|161350036|ref|YP_397389.2| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus str. MIT 9312] gi|118595601|sp|Q31AZ2|DXS_PROM9 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS Length = 629 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 10/141 (7%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYV 214 G G +S G+A A + + CV GDGA G E+ N A L N ++ V Sbjct: 111 GAGHASTSISAALGMAIARDRKGENHKCVAVIGDGALTGGMALEAINHAGHLPNTPLVVV 170 Query: 215 IENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + +N ++ V R S F V ++ + + G DI + +V Sbjct: 171 LNDNDMSISPPVGALSSYLNKVRLSPPLQFLSDSVQESVKNIPLIGKDIPEELKNIKGSV 230 Query: 266 AYCRAHKGPIIIEMLTYRYRG 286 K + E L + Y G Sbjct: 231 RRLAVPKVGAVFEELGFTYMG 251 >gi|325968941|ref|YP_004245133.1| transketolase [Vulcanisaeta moutnovskia 768-28] gi|323708144|gb|ADY01631.1| Transketolase central region [Vulcanisaeta moutnovskia 768-28] Length = 569 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRR-SDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S+G G+A A + R +D V GDG N+GQ +E+ A + L N+ ++ Sbjct: 119 GSLGQGLSMGVGLALAGRVRDCNDGFVYVLMGDGELNEGQTWEAATTAVKYGLDNLKVIV 178 Query: 216 ENNQYAMGTSVS 227 N Y + + S Sbjct: 179 SLNGYQLDGATS 190 >gi|296444536|ref|ZP_06886500.1| deoxyxylulose-5-phosphate synthase [Methylosinus trichosporium OB3b] gi|296257804|gb|EFH04867.1| deoxyxylulose-5-phosphate synthase [Methylosinus trichosporium OB3b] Length = 643 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I S +GG + FS + + F GH +S G G+A + Sbjct: 86 LTGRRDRIRSLRQGGGLSGFSKRAESEYDAFGAGHS--STSISAGLGMAIGRDLSGGNNH 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 V GD A + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VVAVIGDSALSAGMAYEAMNNAGALDSRLIVILNDNDMSIAPPTGAMSA 192 >gi|221124376|ref|XP_002163282.1| PREDICTED: hypothetical protein [Hydra magnipapillata] gi|260220842|emb|CBA28812.1| 1-deoxy-D-xylulose-5-phosphate synthase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 631 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/179 (20%), Positives = 71/179 (39%), Gaps = 54/179 (30%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ---- 219 +S G+A A++ + D+ V GDGA G +E+ N A + + ++ ++ +N Sbjct: 128 ISAALGMALASRIKGEDRYSVAVIGDGAMTAGMAFEALNNAGVEDCRLLVILNDNDMSIS 187 Query: 220 ------------------YAMGTSVSRASAQ-----------------------TNFSKR 238 YA SV ++ + T F K Sbjct: 188 PPVGALNRYLAQLMSGQFYAAAKSVGKSVLKGAPPLFELAKRLEEQAKGMVVPATLFEKF 247 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANY 295 G ++ P +DG D+ ++ T++ + KGP + ++T + +G+ + +DP Y Sbjct: 248 GFNYIGP---IDGHDLDSLIPTLEN----IKQLKGPQFLHVVTKKGQGYKLAEADPVAY 299 >gi|160894929|ref|ZP_02075703.1| hypothetical protein CLOL250_02479 [Clostridium sp. L2-50] gi|156863360|gb|EDO56791.1| hypothetical protein CLOL250_02479 [Clostridium sp. L2-50] Length = 584 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 22/145 (15%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G VSL G+A A ++ D + GDG+ + G+ E + AA N+I V+ + Sbjct: 113 GHTSTSVSLACGLAKARDLKKEDSNVIAVIGDGSLSGGEALEGLDYAAELGGNLIIVVND 172 Query: 218 NQYAMGTS------------VSRASAQTN-FSKRGVSFNIPGMQVD-GMDIRAVKATMDK 263 N ++ + + A+ N F G+ + + VD G DI A+ A + Sbjct: 173 NDMSIAENHGGLYQNLKLLRETNGQAECNLFRAMGLDY----VYVDKGNDIAALIAAFES 228 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHS 288 + K P+++ + T + +G++ Sbjct: 229 ----VKDSKKPVVVHIKTLKGKGYA 249 >gi|307543673|ref|YP_003896152.1| 1-deoxy-D-xylulose-5-phosphate synthase [Halomonas elongata DSM 2581] gi|307215697|emb|CBV40967.1| 1-deoxy-D-xylulose-5-phosphate synthase [Halomonas elongata DSM 2581] Length = 655 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 49/222 (22%), Positives = 95/222 (42%), Gaps = 37/222 (16%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEE-KAGQLY 73 M L + +R AT +D ++ P + N+ Q L++ +E +A LY Sbjct: 1 MKLFDDIPVERPATPLLDTLETPA----ALRAMNEAQ---------LVQVADELRAYLLY 47 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELT 130 +G+ GG +G + V + +L T D+++ ++ + H + LT Sbjct: 48 SVGVSGGHFGAGLGVVELTVALHHALETPHDRLVWDVGHQAYPHKI------------LT 95 Query: 131 GRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 GR+ + S + G + F + + F GH VS G+A A + R + Sbjct: 96 GRREAMQSIRQFGGLAAFPRRSESEYDTFGVGHS--STSVSAALGMALAARTRGEKRRVC 153 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GDGA + G +E+ A + N++ ++ +N+ ++ +V Sbjct: 154 AVIGDGALSAGMAFEALAHAGHVDANLLVILNDNEMSISENV 195 >gi|261403671|ref|YP_003247895.1| Transketolase domain protein [Methanocaldococcus vulcanius M7] gi|261370664|gb|ACX73413.1| Transketolase domain protein [Methanocaldococcus vulcanius M7] Length = 275 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 5/134 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S GIA + + + V GDG +G V+E+ AA + L N+I I+ Sbjct: 118 GSLGQGFSASVGIALGCRLDKLNNYVYVLLGDGECQEGIVWEAAMAAAHYKLDNLIAFID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + + + + +F ++DG + + T++KA + II Sbjct: 178 RNKLQIDGHTEDVMSLGDIKAKFEAFGWDVFEIDGHNFEEIINTVEKAKSMKNGKPKMII 237 Query: 277 IEMLTYRYRGHSMS 290 TY +G +S Sbjct: 238 ----TYTVKGKGVS 247 >gi|240103657|ref|YP_002959966.1| Transketolase N-terminal section (tk) [Thermococcus gammatolerans EJ3] gi|239911211|gb|ACS34102.1| Transketolase N-terminal section (tk) [Thermococcus gammatolerans EJ3] Length = 219 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ GIA A + + V GDG ++GQV+E+ AA L NVI +++ Sbjct: 97 GSLGQGLSVANGIALAKRIDGEEGRIYVILGDGELDEGQVWEAAMTAAHHRLENVIAIVD 156 Query: 217 NNQYAM 222 N + + Sbjct: 157 RNYFQL 162 >gi|183206723|gb|ACC54554.1| putative 1-D-deoxyxylulose 5-phosphate synthase type 2 [Pinus densiflora] Length = 740 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 13/109 (11%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH +G G G G +S G G+A + Sbjct: 171 ILTGRRSKMHTIRQTSGLAGFPKRDESKYDAFGAGHSSTSISAGLGMAVGRDLLKKKNHV 230 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVI-ENNQYAMGTSVSRASA 231 V GDGA GQ YE+ N + N+I ++ +N Q ++ T+ +A Sbjct: 231 VAVIGDGAMTAGQAYEAMNNSGYLESNLIIILNDNKQVSLPTATLDGAA 279 >gi|239617284|ref|YP_002940606.1| Transketolase domain protein [Kosmotoga olearia TBF 19.5.1] gi|239506115|gb|ACR79602.1| Transketolase domain protein [Kosmotoga olearia TBF 19.5.1] Length = 634 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 12/146 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A A+K + V GD +GQV E+ A + L N++ VI+ Sbjct: 122 GNLGQGLSAGVGMALASKISGKNFQVYVAMGDAEQAKGQVAEARRTAVKYGLNNLVAVID 181 Query: 217 NNQYAM---GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 N + V + N+ G ++VDG D A+ + +A Y +G Sbjct: 182 YNDAQISGRAHDVMFVDIKANYEADGWKV----IEVDGHDYEALNDALCEASNYS---EG 234 Query: 274 PIIIEMLTYRYRGHS-MSDPANYRTR 298 P++I T +G S M D Y + Sbjct: 235 PVVIIAKTVMGKGVSFMEDVVGYHGK 260 >gi|325123632|gb|ADY83155.1| 1-deoxyxylulose-5-phosphate synthase [Acinetobacter calcoaceticus PHEA-2] Length = 634 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 35/218 (16%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEE-KAGQLYGM 75 L + +R T +D +D P Q+L L++ +E + LY Sbjct: 2 LYTEIPTQRPVTPLLDAIDHP-------------QQLRQLEHSQLVQVADELRQYILYAA 48 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGR 132 G GG +G + V + T D+++ ++ + H + LTGR Sbjct: 49 GQSGGHFGANLGVVELTVALHYCFNTPNDRLVWDVGHQAYPHKV------------LTGR 96 Query: 133 QGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCF- 187 + ++ + K G + + + G+ +S G G++ A +Y+ +D VVC Sbjct: 97 REQMTTIRAKNGLAAFPAREESVFDTFGVGHSSTAISAGLGMSLARRYQ-NDPCEVVCIV 155 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 GDGA G +E+ N A + ++I V+ +N ++ S Sbjct: 156 GDGAMTAGMAFEAMNDAVAHDADLIVVLNDNDMSISCS 193 >gi|226330948|ref|ZP_03806466.1| hypothetical protein PROPEN_04871 [Proteus penneri ATCC 35198] gi|225201743|gb|EEG84097.1| hypothetical protein PROPEN_04871 [Proteus penneri ATCC 35198] Length = 935 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 5/118 (4%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A QG V E+ N++ V + ++ NNQ TS + + T + Sbjct: 351 LPITIHGDAAVTGQGVVQETLNMSQARGYEVGGTVRIVINNQVGFTTSNPKDARSTQYCT 410 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 V P V+ D AV A+ + K ++I+++ YR GH+ +D N Sbjct: 411 DIVKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEADEPN 468 >gi|167771925|ref|ZP_02443978.1| hypothetical protein ANACOL_03298 [Anaerotruncus colihominis DSM 17241] gi|167665723|gb|EDS09853.1| hypothetical protein ANACOL_03298 [Anaerotruncus colihominis DSM 17241] Length = 300 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 12/158 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K R GDG +GQV+E+ +AA L N+ +++ Sbjct: 141 GSLGQGISAAVGMAISAKLRGKAYRVYALLGDGELQEGQVWEASMLAAHRELDNLTVIVD 200 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI----------RAVKATMDKAVA 266 NN + + + + ++ +F ++++ D RAVK +A Sbjct: 201 NNGLQIDGDIRQVCSPYPIDQKFAAFGFHVVRINAHDFGQILDAFGEARAVKGRPTAIIA 260 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEM 304 KG +E + G + +D + EE+N M Sbjct: 261 RSVKGKGVSFMENQA-SWHGVAPNDEQYVQAMEELNRM 297 >gi|256828746|ref|YP_003157474.1| deoxyxylulose-5-phosphate synthase [Desulfomicrobium baculatum DSM 4028] gi|256577922|gb|ACU89058.1| deoxyxylulose-5-phosphate synthase [Desulfomicrobium baculatum DSM 4028] Length = 635 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 45/211 (21%), Positives = 73/211 (34%), Gaps = 62/211 (29%) Query: 139 GKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 G+ G H +G G G G +S G+A A D V Sbjct: 92 GRLGRFHTLRQLDGISGFPRICESPFDHFGVGHSSTSISAALGMAAARDLAHQDHKVVAV 151 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA--QTNFSKRGV---- 240 GDG+ G YE N A N++ V+ +N+ ++ +V S+ SKR V Sbjct: 152 IGDGSMTAGLAYEGLNQAGGLGKNMVVVLNDNEMSISRNVGALSSFLSRKLSKRWVQRFK 211 Query: 241 -----------------------------SFNIPGM-----------QVDGMDIRAVKAT 260 SF PGM + G D+R + Sbjct: 212 KEAESIMRQIPRIGDDLAEYARRSEDSLKSFFTPGMLFEAFRFTYIGPLQGHDMRMLTNV 271 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + R +GPI++ +LT + +G++ ++ Sbjct: 272 FQQT----RELEGPILVHVLTKKGKGYAPAE 298 >gi|194687929|ref|XP_001257222.2| PREDICTED: 1-deoxyxylulose 5-phosphate synthase-like, partial [Bos taurus] Length = 414 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 34/63 (53%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G+A A K + ++ V GDGA + G +E+ N A + + N++ V+ +N ++ Sbjct: 47 ISAALGMALAAKRKGDNRHAVAIIGDGAMSAGMAFEALNNAGVADCNLLVVLNDNDMSIS 106 Query: 224 TSV 226 V Sbjct: 107 PPV 109 >gi|121610897|ref|YP_998704.1| 2-oxoglutarate dehydrogenase E1 component [Verminephrobacter eiseniae EF01-2] gi|121555537|gb|ABM59686.1| 2-oxoglutarate dehydrogenase E1 component [Verminephrobacter eiseniae EF01-2] Length = 959 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 11/128 (8%) Query: 177 RRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 RR+D + V+ GD A A QG + E+ +A + ++++ NNQ TS Sbjct: 351 RRADPQGQQVLPVLVHGDAAFAGQGVIQETLALAQTRGYSTGGTVHIVINNQIGFTTSDP 410 Query: 228 RASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S T + V P + V+G D AV A+ + + ++++++ +R G Sbjct: 411 RDSRSTLYCTDVVKMIESPVLHVNGDDPEAVVLATQLALEFRMEFRKDVVVDIVCFRKLG 470 Query: 287 HSMSD-PA 293 H+ D PA Sbjct: 471 HNEQDTPA 478 >gi|83945404|ref|ZP_00957752.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicaulis alexandrii HTCC2633] gi|83851238|gb|EAP89095.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicaulis alexandrii HTCC2633] Length = 635 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 47/211 (22%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFAN----KYRRSDKI 182 LTGR+ I + +GG + F+ ++ Y G A S+ G+ FA K+ K+ Sbjct: 84 LTGRRDRIRTLRQGGGLSGFTKRSESDYDPFGAAHASTSISAGLGFAVGRDLKHEEGRKV 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA--------------------- 221 V GDG+ + G YE+ N A ++I ++ +N + Sbjct: 144 VAVI-GDGSMSAGMAYEAMNNAGDMKKDLIVILNDNDMSIAPPVGAMSHYFARQVSSKSY 202 Query: 222 -----MGTSVSRASAQTNFSKRGVSFNIPGMQVDG-----MDIRAVKAT----MDKAVAY 267 +G V+ A ++R + + GM + G M R V MD+ VA Sbjct: 203 NSIRKLGRGVAEALGVKEHARRAEEY-LRGMAMGGTLFEEMGFRYVGPIDGHDMDQLVAV 261 Query: 268 CR----AHKGPIIIEMLTYRYRGHSMSDPAN 294 R A +GPI+I +T + +G++ ++ A+ Sbjct: 262 LRNVRDAGEGPILIHAVTQKGKGYAPAEAAD 292 >gi|315230182|ref|YP_004070618.1| transketolase [Thermococcus barophilus MP] gi|315183210|gb|ADT83395.1| transketolase [Thermococcus barophilus MP] Length = 221 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ GIA A+K ++ V GDG ++GQ++E+ ++ + L NVI +++ Sbjct: 100 GSLGQGLSVANGIALASKLEGEERNVYVILGDGELDEGQIWEAAMTSSHYRLDNVIAIVD 159 Query: 217 NN 218 N Sbjct: 160 RN 161 >gi|167751553|ref|ZP_02423680.1| hypothetical protein EUBSIR_02554 [Eubacterium siraeum DSM 15702] gi|167655361|gb|EDR99490.1| hypothetical protein EUBSIR_02554 [Eubacterium siraeum DSM 15702] Length = 585 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 28/182 (15%) Query: 129 LTGRQGGI------SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G G S S + F GH VSL G+A A + Sbjct: 80 LTGRKDGFLYEEHFDNISGYSNPAESEHDFFVIGH--TSTSVSLALGLAKARDLKHESGN 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS------------VSRAS 230 + GDG+ + G+ E+ + A ++ N+I +I +N ++ + Sbjct: 138 VIAVIGDGSLSGGEALEAIDYAGEFDGNLIVIINDNDMSIAENHGGMYKNLKALREGNGK 197 Query: 231 AQTN-FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 A TN F+ G+ + DG DI ++ A K + K P+ + ++T + +G S Sbjct: 198 ADTNLFTAMGLDYV---FVKDGNDIESLIAAFSK----VKDSKRPVAVHIVTEKGKGLSF 250 Query: 290 SD 291 ++ Sbjct: 251 AE 252 >gi|254372830|ref|ZP_04988319.1| 1-deoxyxylulose-5-phosphate synthase [Francisella tularensis subsp. novicida GA99-3549] gi|151570557|gb|EDN36211.1| 1-deoxyxylulose-5-phosphate synthase [Francisella novicida GA99-3549] Length = 615 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 87/223 (39%), Gaps = 66/223 (29%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS S + T F GH +S G+A A++ + Sbjct: 84 LTGRKDKLVTIKKDGGISGFPKRSESEYDT---FGVGHS--STSISAALGMAIADRLQGK 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK-- 237 V GDGA G +E+ N A +++ ++ +N+ ++ +V SA +FSK Sbjct: 139 SSNTVAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSA--HFSKII 196 Query: 238 ------------RGVSFNIP--------------GM----------------QVDGMDIR 255 + V NIP GM +DG D+ Sbjct: 197 SGGFYNSIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDV- 255 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYR 296 + K + + HKGP ++ ++T + +G++ SDP + Sbjct: 256 ---TELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFH 295 >gi|149034221|gb|EDL88991.1| transketolase, isoform CRA_a [Rattus norvegicus] Length = 655 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A ++ L N++ + Sbjct: 155 GSLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGEVSEGSVWEAMAFAGIYKLDNLVAIF 214 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 215 DINRLGQSDPAPLQHQVDVYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 268 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 269 AIIAKTFKGRG 279 >gi|325578413|ref|ZP_08148548.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parainfluenzae ATCC 33392] gi|325160149|gb|EGC72278.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parainfluenzae ATCC 33392] Length = 617 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ +S + KGG +H F + + GH +S G GIA A + + + Sbjct: 84 LTGRRDQMSTIRQKGG-IHPFPWREESEFDVLSVGHS--STSISAGLGIAVAAERENAGR 140 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 141 KTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDNEMSISENV 185 >gi|301156309|emb|CBW15780.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Haemophilus parainfluenzae T3T1] Length = 617 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ +S + KGG +H F + + GH +S G GIA A + + + Sbjct: 84 LTGRRDQMSTIRQKGG-IHPFPWREESEFDVLSVGHS--STSISAGLGIAVAAERENAGR 140 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 141 KTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDNEMSISENV 185 >gi|294499653|ref|YP_003563353.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus megaterium QM B1551] gi|294349590|gb|ADE69919.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus megaterium QM B1551] Length = 953 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 8/128 (6%) Query: 174 NKYRRSD---KICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV 226 N Y + D ++ GD A +G V E+ N+ L I++I NN T Sbjct: 346 NGYPKQDVKKSFAILIHGDAAFPGEGIVQETLNLNQLTGYQTGGTIHIIANNMIGFTTES 405 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + + S F IP + V+ D A A A Y R +I+++ YR G Sbjct: 406 VDSRSTKYASDLAKGFEIPIVHVNADDPEACLAAAYFAYEYRRRFNKDFLIDLIGYRRFG 465 Query: 287 HS-MSDPA 293 H+ M +P+ Sbjct: 466 HNEMDEPS 473 >gi|291393851|ref|XP_002713299.1| PREDICTED: transketolase isoform 1 [Oryctolagus cuniculus] Length = 623 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+ + L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASFYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DVNRLGQSDPAPLQHQLDVYQKRCEAFGWHTIIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|194396283|gb|ACF60511.1| 1-D-deoxyxylulose 5-phosphate synthase [Nicotiana tabacum] Length = 717 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+G +S + G + S + F GH +S G G+A + + Sbjct: 151 LTGRRGKMSTLRQTDGLAGFTKRSESVYDCFGTGHS--STTISAGLGMAVGRDLKGKNNN 208 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 209 VIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNR 245 >gi|12018252|ref|NP_072114.1| transketolase [Rattus norvegicus] gi|485267|gb|AAA18026.1| transketolase [Rattus norvegicus] Length = 655 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A ++ L N++ + Sbjct: 155 GSLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGEVSEGSVWEAMAFAGIYKLDNLVAIF 214 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 215 DINRLGQSDPAPLQHQVDVYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 268 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 269 AIIAKTFKGRG 279 >gi|317012199|gb|ADU82807.1| transketolase [Helicobacter pylori Lithuania75] Length = 641 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQTLLDKQAISHKVYCLC-GDGDLQEGISYESASLAGHLNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + VI ++NQ ++ +++ S R V+ N ++ DG D +A+ +++A Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFVAQNWEVLECDGHDYQAIHNALEEA 233 >gi|307069637|ref|YP_003878114.1| 2-oxoglutarate dehydrogenase, E1 subunit [Candidatus Zinderia insecticola CARI] gi|306482897|gb|ADM89768.1| 2-oxoglutarate dehydrogenase, E1 subunit [Candidatus Zinderia insecticola CARI] Length = 883 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 5/124 (4%) Query: 176 YRRSDKICVVCFGDGA-ANQGQVYESFNIAAL---WNLNVIYVIENNQYAMGTSVSRASA 231 + + + I ++ GD + + QG V E+ N+ + N I++I NNQ TS ++ Sbjct: 296 FFKKNIIPILIHGDSSFSGQGIVMETLNLQKINGYSNNGTIHIIINNQIGFTTSNNKNQR 355 Query: 232 QTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 T F S F +P + V+ + V + A+ Y K III +++YR GH+ Sbjct: 356 STKFCSDIAKMFEMPVLHVNSNSVEKVIIVLKFALDYKIKFKKDIIINLISYRKLGHNEQ 415 Query: 291 DPAN 294 D N Sbjct: 416 DNPN 419 >gi|268318918|ref|YP_003292574.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus johnsonii FI9785] gi|262397293|emb|CAX66307.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus johnsonii FI9785] Length = 586 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 20/147 (13%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G V+L TG+A A + GDG+ G +E FN AA N+I Sbjct: 115 YFAVGHTSTSVALATGMARARDMLGEHENITALIGDGSLTGGLAFEGFNNAADEKHNLII 174 Query: 214 VIENNQYAMGTSV-------------SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 V+ +NQ ++ +V + +A F+ G+ + G G DI+A+ T Sbjct: 175 VVNDNQMSIDDNVGGVVTALKKLRESNGQTADNPFTAMGLDYKYVGQ---GNDIKAMIDT 231 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + PI++ + T + +G+ Sbjct: 232 FKS----IKDIDHPIVLHINTLKGKGY 254 >gi|225469658|ref|XP_002266925.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296090521|emb|CBI40852.3| unnamed protein product [Vitis vinifera] Length = 718 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH +G G G G +S G G+A Sbjct: 148 ILTGRRSRMHTIRKTSGLAGFPKREESVHDAFGVGHSSTSISAGLGMAVGRDLLGKTNSV 207 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + N+I ++ +N+ Sbjct: 208 VAVIGDGAMTAGQAYEAMNNAGYLDTNMIIILNDNK 243 >gi|225028171|ref|ZP_03717363.1| hypothetical protein EUBHAL_02443 [Eubacterium hallii DSM 3353] gi|224954483|gb|EEG35692.1| hypothetical protein EUBHAL_02443 [Eubacterium hallii DSM 3353] Length = 275 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 2/148 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A ANK GDG +G V+E A + L N+ V++ Sbjct: 112 GSLGHGLPVCVGMALANKMDGKTGRVYTVMGDGELAEGSVWEGAMAAGHYKLDNLCAVVD 171 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + + A + R +F + G +I ++ ++A C+ II Sbjct: 172 RNRLQISGNTEDVMADDDLDARFRAFGWNSIHAQGNNIESLNEAFEEAKT-CKGKPTVII 230 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEM 304 + + G M + A++ + EM Sbjct: 231 ADTIKGYGGGEIMENKADWHHKVPTQEM 258 >gi|123968487|ref|YP_001009345.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus str. AS9601] gi|166201527|sp|A2BR27|DXS_PROMS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|123198597|gb|ABM70238.1| 1-deoxy-D-xylulose 5-phosphate synthase [Prochlorococcus marinus str. AS9601] Length = 629 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 10/141 (7%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYV 214 G G +S G+A A + + CV GDGA G E+ N A L N ++ V Sbjct: 111 GAGHASTSISAALGMAIARDRKGENYKCVAVIGDGALTGGMALEAINHAGHLPNTPLVVV 170 Query: 215 IENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + +N ++ V R S F V ++ + + G DI + +V Sbjct: 171 LNDNDMSISPPVGALSSYLNKVRVSPPLQFLSDSVQESVKNIPLIGKDIPEELKNIKGSV 230 Query: 266 AYCRAHKGPIIIEMLTYRYRG 286 K + E L + Y G Sbjct: 231 RRLSVPKVGAVFEELGFTYMG 251 >gi|308184151|ref|YP_003928284.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori SJM180] gi|308060071|gb|ADO01967.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori SJM180] Length = 616 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 82/194 (42%), Gaps = 18/194 (9%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IVGM + + I T+++ + H L G ++ + + G G Sbjct: 35 GGHLSSSLGAVELIVGMHALFDCQKNPFIFDTSHQAYAHKLLTGRFESFSTLRQFQGLSG 94 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH VS+G G+A A +++ + + GDG+ + Sbjct: 95 FTKPSE-------SAYDYFIAGHS--STSVSIGVGVAKAFCLKQALGMPIALLGDGSISA 145 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G YE+ N +I ++ +N+ ++ T + S + +G P Q + Sbjct: 146 GIFYEALNELGDRKYPMIMILNDNEMSISTPIGALSKALSQLMKG-----PFYQSFRSKV 200 Query: 255 RAVKATMDKAVAYC 268 + + +T+ ++V Y Sbjct: 201 KKILSTLPESVNYL 214 >gi|283784724|ref|YP_003364589.1| hypothetical protein ROD_09661 [Citrobacter rodentium ICC168] gi|282948178|emb|CBG87745.1| conserved hypothetical protein [Citrobacter rodentium ICC168] Length = 265 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G++G +S+ G+A A K + GDG ++GQV+ES A+ L N++ VI+ Sbjct: 110 GLLGQGLSIALGMAAAKKRAKDPHRVFAILGDGEMHEGQVWESLQQASHMKLDNLVAVID 169 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSF--NIPGMQVDGMDIRAVKATM 261 N ++ V+ + + SF ++ MQ +G D+ V T+ Sbjct: 170 YNGFSSHDPVNEVINLEPLADKIRSFGWHVLEMQ-NGNDMHQVADTL 215 >gi|257867664|ref|ZP_05647317.1| acetolactate synthase [Enterococcus casseliflavus EC30] gi|257873992|ref|ZP_05653645.1| acetolactate synthase [Enterococcus casseliflavus EC10] gi|257801747|gb|EEV30650.1| acetolactate synthase [Enterococcus casseliflavus EC30] gi|257808156|gb|EEV36978.1| acetolactate synthase [Enterococcus casseliflavus EC10] Length = 566 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 26/139 (18%) Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 GG G +G + G G+ FA+ +K+ VV GDG + F I + LNV +V Sbjct: 418 GGLGTMGYGIPAGIGVQFAH----PEKMVVVFVGDGGFQMTN--QEFAILNEYGLNVKFV 471 Query: 215 IENN-------QYAMGTSVSRASA-----QTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 + NN Q+ R SA Q +F K ++ I G ++D A + +D Sbjct: 472 LLNNCSLGMVRQWQETFHGKRRSASVFAQQPDFVKLAQAYGIEGCRID-----APEQLVD 526 Query: 263 K-AVAYCRAHKGPIIIEML 280 + A A+ +A GP +IE++ Sbjct: 527 QLAAAFSQA--GPQLIEVM 543 >gi|197284466|ref|YP_002150338.1| 2-oxoglutarate dehydrogenase E1 component [Proteus mirabilis HI4320] gi|227356644|ref|ZP_03841030.1| 2-oxoglutarate dehydrogenase E1 component [Proteus mirabilis ATCC 29906] gi|194681953|emb|CAR41366.1| 2-oxoglutarate dehydrogenase E1 component [Proteus mirabilis HI4320] gi|227163152|gb|EEI48083.1| 2-oxoglutarate dehydrogenase E1 component [Proteus mirabilis ATCC 29906] Length = 934 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 5/118 (4%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A QG V E+ N++ V + ++ NNQ TS + + T + Sbjct: 351 LPITIHGDAAVTGQGVVQETLNMSQARGYEVGGTVRIVINNQVGFTTSNPKDARSTEYCT 410 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 V P V+ D AV A+ + K ++I+++ YR GH+ +D N Sbjct: 411 DIVKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEADEPN 468 >gi|83575463|gb|ABC22014.1| 2-oxoglutarate dehydrogenase E1 component [Rhodospirillum rubrum ATCC 11170] Length = 983 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 5/121 (4%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L I+++ NNQ TS + + Sbjct: 369 RKAVMALLIHGDAAFAGQGLVAECFGLSQLKGYRTGGTIHIVINNQIGFTTSPQYSRSGQ 428 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-P 292 + P V+G D AV T + + ++++M+ YR GH+ SD P Sbjct: 429 YCTDIAKMVQAPIFHVNGDDPEAVVHTARIVTEFRQEFGVDVVLDMVCYRRHGHNESDEP 488 Query: 293 A 293 A Sbjct: 489 A 489 >gi|146296858|ref|YP_001180629.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410434|gb|ABP67438.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 617 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S+ G A A D + GDGA G YE N A + Sbjct: 106 SIYDSFDTGHS--STSISVALGFAIARDLNHKDYNVIAVIGDGALTGGLAYEGLNNAGRY 163 Query: 208 NLNVIYVIENNQYAMGTSV 226 N ++ ++ +NQ ++ +V Sbjct: 164 NGKLLVILNDNQMSISKNV 182 >gi|270293512|ref|ZP_06199714.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274979|gb|EFA20839.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 586 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 12/157 (7%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH VSL +G+A A + + GDG+ + G+ +E N+ A Sbjct: 105 SEHDFFVIGH--TSTSVSLASGLAKARDLKGEAGNVIAVIGDGSLSGGEAFEGLNVGAEL 162 Query: 208 NLNVIYVIENNQYAMGTS---VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD-- 262 N I ++ +NQ ++ + + R Q ++ N + G D VK D Sbjct: 163 GTNFIVIVNDNQMSIAENHGGLYRNLQQLRETEGQAPCNY--FKAMGYDYLYVKDGNDVE 220 Query: 263 ---KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 +A + K P+++ + T + +G+ +++ R Sbjct: 221 QLIEAFREVKDKKHPVVVHINTLKGKGYKLAEEQKER 257 >gi|209965549|ref|YP_002298464.1| 2-oxoglutarate dehydrogenase E1 component [Rhodospirillum centenum SW] gi|209959015|gb|ACI99651.1| 2-oxoglutarate dehydrogenase, E1 component [Rhodospirillum centenum SW] Length = 975 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 9/162 (5%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQT 233 R + + V+ GD A A QG V E+ ++ L VI+ I NNQ T+ Sbjct: 381 RREVMGVLLHGDAAFAGQGLVPETLLLSELKGYRTGGVIHFIINNQIGFTTAPQYGRGGP 440 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 ++ S P V+G D AV A + + ++++++ YR +GH+ D Sbjct: 441 YPTEVAKSIQAPIFHVNGDDPEAVVHIARIATEFRQKFLKDVVVDIVCYRRQGHNEGDEP 500 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 + T+ + + NH ++ R L +EG + + E++ Sbjct: 501 AF-TQPLMYKAIRNHPTTRELYGRQL----VAEGIISQPEVD 537 >gi|71083242|ref|YP_265961.1| transketolase [Candidatus Pelagibacter ubique HTCC1062] gi|91762328|ref|ZP_01264293.1| transketolase [Candidatus Pelagibacter ubique HTCC1002] gi|71062355|gb|AAZ21358.1| transketolase [Candidatus Pelagibacter ubique HTCC1062] gi|91718130|gb|EAS84780.1| transketolase [Candidatus Pelagibacter ubique HTCC1002] Length = 263 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 8/151 (5%) Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL- 209 NG G +G +S G G+ K ++ + +V DG N+G V+E+ A+ L Sbjct: 103 NGVICSTGSLGHGLSFGCGVTLGEKIKKKNNKNLVLLSDGECNEGSVWEAAGFASSKKLN 162 Query: 210 NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 N+I +I+ NN A G S + + ++I +++G D+ V + KA Sbjct: 163 NLIALIDFNNWQATGRSKEIFGGEMKEKWKAFGWDI--QEINGNDVNQVYRAIKKAK--- 217 Query: 269 RAHKGPIIIEMLTYRYRG-HSMSDPANYRTR 298 ++ + P I T + +G M D N+ R Sbjct: 218 KSREKPTAIICNTIKGKGIKFMEDDNNWHYR 248 >gi|323694268|ref|ZP_08108444.1| transketolase [Clostridium symbiosum WAL-14673] gi|323501741|gb|EGB17627.1| transketolase [Clostridium symbiosum WAL-14673] Length = 300 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 8/150 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + GDG +GQV+E+ A L N++ +++ Sbjct: 115 GSLGQGISAAVGMALAAKMDGAAYRVYALLGDGELQEGQVWEAAMFAGYRELDNLVVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 NN + S+ + ++ +FN + V DG D+ A + +A KG P Sbjct: 175 NNNLQIDGSIDEVCSAYPIDEKFKAFNFHVICVEDGNDM----AQLHEAFLEAAKVKGKP 230 Query: 275 IIIEMLTYRYRGHS-MSDPANYRTREEINE 303 I T + +G S M D A++ + +E Sbjct: 231 TAIIAETIKGKGISFMEDKASWHGKAPNDE 260 >gi|296120611|ref|YP_003628389.1| transketolase [Planctomyces limnophilus DSM 3776] gi|296012951|gb|ADG66190.1| Transketolase domain protein [Planctomyces limnophilus DSM 3776] Length = 280 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 58/146 (39%), Gaps = 13/146 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G A A V GDG +GQV+E+ A + L N+ +++ Sbjct: 122 GSLGQGLSVGIGHALACHMDGLSAHTYVMLGDGEMGEGQVWEALASAEKYKLANLTAIVD 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM-------DKAVAYC- 268 N Y + T F + +F ++G DI V A + D+ A Sbjct: 182 QNGYQQTGATKDVLKLTEFQPKIEAFGWHVQTINGNDIEQVIAALKIARSVKDRPTAIVS 241 Query: 269 RAHKG----PIIIEMLTYRYRGHSMS 290 + KG PI+ Y G +S Sbjct: 242 QTQKGFGILPILAPTGDLNYHGKPLS 267 >gi|149412703|ref|XP_001508404.1| PREDICTED: similar to Transketolase (TK) [Ornithorhynchus anatinus] Length = 725 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A ++ L N++ ++ Sbjct: 225 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFAGIYKLDNLVAIL 284 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 285 DINRLGQSDPAPLQHQVEVYQKRCEAFGWHAIVVDGHSVEEL------CKAFGQAKHQPT 338 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 339 AVIAKTFKGRG 349 >gi|122891453|emb|CAM13053.1| transketolase-like 1 [Homo sapiens] Length = 197 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 2/102 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 94 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 153 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 + N+ ++ + +R +F VDG D+ A+ Sbjct: 154 DVNRLGHSGALPAEHCINIYQRRCEAFGWNTYVVDGRDVEAL 195 >gi|146299283|ref|YP_001193874.1| 1-deoxy-D-xylulose-5-phosphate synthase [Flavobacterium johnsoniae UW101] gi|146153701|gb|ABQ04555.1| deoxyxylulose-5-phosphate synthase [Flavobacterium johnsoniae UW101] Length = 595 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 19/144 (13%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRS-DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G +S G+A A+K + DK + GD + G +E N A + + N++ + Sbjct: 114 GVGHSSTSISAALGMAIASKLKGDLDKQHIAVIGDASIASGMAFEGLNHAGVTDANILVI 173 Query: 215 IENNQYAMGTSV------------SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 + +N + SV + Q N K ++F+ G +DG D T+ Sbjct: 174 LNDNAIGIDPSVGALKKYLTAVKNGKNPKQNNIIK-SLNFDYSG-PIDGHDF----PTLI 227 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRG 286 K + + KGP + ++T + +G Sbjct: 228 KELKRLKKIKGPKFLHIVTTKGKG 251 >gi|332678182|gb|AEE87311.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella cf. novicida Fx1] Length = 615 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 87/223 (39%), Gaps = 66/223 (29%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS S + T F GH +S G+A A++ + Sbjct: 84 LTGRKDKLVTIKKDGGISGFPKRSESEYDT---FGVGHS--STSISAALGMAIADRLQGK 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK-- 237 V GDGA G +E+ N A +++ ++ +N+ ++ +V SA +FSK Sbjct: 139 SSNTVAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSA--HFSKII 196 Query: 238 ------------RGVSFNIP--------------GM----------------QVDGMDIR 255 + V NIP GM +DG D+ Sbjct: 197 SGGFYNSIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDV- 255 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYR 296 + K + + HKGP ++ ++T + +G++ SDP + Sbjct: 256 ---TELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFH 295 >gi|295705042|ref|YP_003598117.1| 2-oxoglutarate dehydrogenase E1 component [Bacillus megaterium DSM 319] gi|294802701|gb|ADF39767.1| 2-oxoglutarate dehydrogenase, E1 component [Bacillus megaterium DSM 319] Length = 953 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 8/128 (6%) Query: 174 NKYRRSD---KICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSV 226 N Y + D ++ GD A +G V E+ N+ L I++I NN T Sbjct: 346 NGYPKQDVRKSFAILIHGDAAFPGEGIVQETLNLNQLTGYQTGGTIHIIANNMIGFTTES 405 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + + S F IP + V+ D A A A Y R +I+++ YR G Sbjct: 406 VDSRSTKYASDLAKGFEIPIVHVNADDPEACLAAAYFAYEYRRRFNKDFLIDLIGYRRFG 465 Query: 287 HS-MSDPA 293 H+ M +P+ Sbjct: 466 HNEMDEPS 473 >gi|168334847|ref|ZP_02692970.1| transketolase, N-terminal subunit [Epulopiscium sp. 'N.t. morphotype B'] Length = 281 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 127 AELTGRQGGISKGK-GGSMHMFSTKN---GFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 A L ++ S GK GG + +KN G G +G +S G G A A + +D Sbjct: 71 AGLITKEQLFSFGKDGGILSTHPSKNLDIGIECSTGSLGMGLSFGIGKALAARITGADDR 130 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAM 222 V GDG N+G V+E+ A L N+I +++ N++ + Sbjct: 131 VYVLLGDGECNEGSVWEAAMFAGSAKLTNLIAIVDANKFQL 171 >gi|254374308|ref|ZP_04989790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella novicida GA99-3548] gi|151572028|gb|EDN37682.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella novicida GA99-3548] Length = 615 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 87/223 (39%), Gaps = 66/223 (29%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS S + T F GH +S G+A A++ + Sbjct: 84 LTGRKDKLVTIKKDGGISGFPKRSESEYDT---FGVGHS--STSISAALGMAIADRLQGK 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK-- 237 V GDGA G +E+ N A +++ ++ +N+ ++ +V SA +FSK Sbjct: 139 SSNTVAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSA--HFSKII 196 Query: 238 ------------RGVSFNIP--------------GM----------------QVDGMDIR 255 + V NIP GM +DG D+ Sbjct: 197 SGGFYNSIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDV- 255 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYR 296 + K + + HKGP ++ ++T + +G++ SDP + Sbjct: 256 ---TELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFH 295 >gi|118497488|ref|YP_898538.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. novicida U112] gi|195536181|ref|ZP_03079188.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. novicida FTE] gi|208779286|ref|ZP_03246632.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella novicida FTG] gi|166198617|sp|A0Q6B9|DXS_FRATN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|118423394|gb|ABK89784.1| 1-deoxyxylulose-5-phosphate synthase [Francisella novicida U112] gi|194372658|gb|EDX27369.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. novicida FTE] gi|208745086|gb|EDZ91384.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella novicida FTG] Length = 615 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 87/223 (39%), Gaps = 66/223 (29%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS S + T F GH +S G+A A++ + Sbjct: 84 LTGRKDKLVTIKKDGGISGFPKRSESEYDT---FGVGHS--STSISAALGMAIADRLQGK 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK-- 237 V GDGA G +E+ N A +++ ++ +N+ ++ +V SA +FSK Sbjct: 139 SSNTVAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSA--HFSKII 196 Query: 238 ------------RGVSFNIP--------------GM----------------QVDGMDIR 255 + V NIP GM +DG D+ Sbjct: 197 SGGFYNSIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDV- 255 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYR 296 + K + + HKGP ++ ++T + +G++ SDP + Sbjct: 256 ---TELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFH 295 >gi|16930804|gb|AAL32062.1|AF443590_1 deoxy-D-xylulose-5-phosphate synthase [Morinda citrifolia] Length = 722 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A + + GDGA GQ YE+ N A Sbjct: 182 SVYDAFGAGHS--STSISAGLGMAVGRDLLGKNNNVISVIGDGAMTAGQAYEAMNNAGFL 239 Query: 208 NLNVIYVIENNQ 219 + N+I ++ +N+ Sbjct: 240 DANLIVILNDNK 251 >gi|164686625|ref|ZP_02210653.1| hypothetical protein CLOBAR_00218 [Clostridium bartlettii DSM 16795] gi|164604354|gb|EDQ97819.1| hypothetical protein CLOBAR_00218 [Clostridium bartlettii DSM 16795] Length = 626 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 9/101 (8%) Query: 129 LTGRQGGISKGKG-----GSMHMFSTKNGFYG-GHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G K G + +++ F+ GH +SL +G+A A ++ D Sbjct: 118 LTGRKEGFIDEKSYKTVSGYTNPEESEHDFFNVGH--TSTSISLASGLAKARDLKKEDYN 175 Query: 183 CVVCFGDGAANQGQVYESFNIA-ALWNLNVIYVIENNQYAM 222 V GDG+ + G+ E N A + N N I ++ +NQ ++ Sbjct: 176 VVAVIGDGSLSGGEALEGLNFAGSELNSNFIIIVNDNQQSI 216 >gi|161504394|ref|YP_001571506.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189027784|sp|A9MM42|DXS_SALAR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|160865741|gb|ABX22364.1| hypothetical protein SARI_02505 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 620 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|253990448|ref|YP_003041804.1| 2-oxoglutarate dehydrogenase E1 component [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638985|emb|CAR67600.1| 2-oxoglutarate dehydrogenase e1 component (ec 1.2.4.2) (alpha ketoglutarate dehydrogenase) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781898|emb|CAQ85062.1| 2-oxoglutarate dehydrogenase e1 component [Photorhabdus asymbiotica] Length = 935 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A QG V E+ N++ V I ++ NNQ TS + + T + Sbjct: 352 LPITIHGDAAVTGQGVVQETLNMSQARGYEVGGTIRIVINNQIGFTTSNPKDARSTQYCT 411 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + P V+ D AV A+ + A K ++I+++ YR GH+ +D Sbjct: 412 DIIKMVQAPIFHVNADDPEAVAFVTRLALDFRNAFKRDVMIDLVCYRRHGHNEAD 466 >gi|126696290|ref|YP_001091176.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus str. MIT 9301] gi|166201523|sp|A3PCV0|DXS_PROM0 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|126543333|gb|ABO17575.1| 1-deoxy-D-xylulose 5-phosphate synthase [Prochlorococcus marinus str. MIT 9301] Length = 629 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 10/141 (7%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYV 214 G G +S G+A A + + CV GDGA G E+ N A L N ++ V Sbjct: 111 GAGHASTSISAALGMAIARDRKGDNYKCVAVIGDGALTGGMALEAINHAGHLPNTPLVVV 170 Query: 215 IENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + +N ++ V R S F V ++ + + G DI + +V Sbjct: 171 LNDNDMSISPPVGALSSYLNKVRVSPPLQFLSDSVQESVKNIPLIGKDIPEELKNIKGSV 230 Query: 266 AYCRAHKGPIIIEMLTYRYRG 286 K + E L + Y G Sbjct: 231 RRLSVPKVGAVFEELGFTYMG 251 >gi|221065760|ref|ZP_03541865.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni KF-1] gi|220710783|gb|EED66151.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni KF-1] Length = 622 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 16/63 (25%), Positives = 32/63 (50%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G+A A K + D+ + GDGA G +E+ N + + N++ ++ +N ++ Sbjct: 125 ISAALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNGGVHDANLLVILNDNDMSIS 184 Query: 224 TSV 226 V Sbjct: 185 PPV 187 >gi|204927391|ref|ZP_03218593.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204324056|gb|EDZ09251.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|322614702|gb|EFY11631.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618808|gb|EFY15696.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623515|gb|EFY20354.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629187|gb|EFY25966.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631907|gb|EFY28661.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637356|gb|EFY34058.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642041|gb|EFY38651.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647860|gb|EFY44335.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652538|gb|EFY48892.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653300|gb|EFY49633.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660551|gb|EFY56787.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664703|gb|EFY60896.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669244|gb|EFY65394.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670789|gb|EFY66922.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678972|gb|EFY75027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682000|gb|EFY78025.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685171|gb|EFY81168.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194481|gb|EFZ79676.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196982|gb|EFZ82124.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203967|gb|EFZ88984.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206948|gb|EFZ91901.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210834|gb|EFZ95706.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214525|gb|EFZ99276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223082|gb|EGA07425.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227031|gb|EGA11212.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230151|gb|EGA14271.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233889|gb|EGA17978.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238417|gb|EGA22475.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244105|gb|EGA28114.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246265|gb|EGA30248.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251891|gb|EGA35754.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257888|gb|EGA41567.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261099|gb|EGA44691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264971|gb|EGA48470.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272534|gb|EGA55941.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 620 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|161777626|ref|YP_426301.2| 2-oxoglutarate dehydrogenase E1 component [Rhodospirillum rubrum ATCC 11170] Length = 987 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 5/121 (4%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E F ++ L I+++ NNQ TS + + Sbjct: 373 RKAVMALLIHGDAAFAGQGLVAECFGLSQLKGYRTGGTIHIVINNQIGFTTSPQYSRSGQ 432 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-P 292 + P V+G D AV T + + ++++M+ YR GH+ SD P Sbjct: 433 YCTDIAKMVQAPIFHVNGDDPEAVVHTARIVTEFRQEFGVDVVLDMVCYRRHGHNESDEP 492 Query: 293 A 293 A Sbjct: 493 A 493 >gi|222055718|ref|YP_002538080.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. FRC-32] gi|221565007|gb|ACM20979.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. FRC-32] Length = 624 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 8/110 (7%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 R GGIS G S + F GH +S G+A A +R + GDG+ Sbjct: 94 RLGGIS---GFPKRCESPHDAFDVGHS--STSISAALGMALARDLKREKNKVLAVIGDGS 148 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 G YE N A N +++ ++ +N+ ++ +V A ++F R ++ Sbjct: 149 MTGGLAYEGLNHAGHLNRDMVVILNDNEMSISENV---GALSSFLSRTIT 195 >gi|294793010|ref|ZP_06758156.1| 1-deoxy-D-xylulose-5-phosphate synthase [Veillonella sp. 6_1_27] gi|294455955|gb|EFG24319.1| 1-deoxy-D-xylulose-5-phosphate synthase [Veillonella sp. 6_1_27] Length = 585 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/142 (21%), Positives = 68/142 (47%), Gaps = 10/142 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G +SL +G+A A + + + GDG+ + G+ +E + AA N N+I ++ + Sbjct: 113 GHTSTSISLASGLATARNLKGDSENIIAIIGDGSLSGGEAFEGLDYAATLNSNMIIIVND 172 Query: 218 NQYAMGTS---VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA--TMDKAVAYCRAHK 272 N ++ + + R + S NI + G+D R V ++ + +A K Sbjct: 173 NDQSIAENHGGLYRGLRELRESNGESPNNI--FKALGLDYRFVADGNDLETLIDVFKAVK 230 Query: 273 G---PIIIEMLTYRYRGHSMSD 291 PI++ ++T + +G+++++ Sbjct: 231 DIDHPIVLHIVTQKGKGYAIAE 252 >gi|224117606|ref|XP_002331678.1| predicted protein [Populus trichocarpa] gi|222874097|gb|EEF11228.1| predicted protein [Populus trichocarpa] Length = 646 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G+A D + GDGA GQ YE+ N A Sbjct: 115 SEHDAFGAGHS--STSISAALGMAVGRDLLGKDNHVIAVIGDGAMTAGQAYEAMNNAGYL 172 Query: 208 NLNVIYVIENNQ 219 + N+I ++ +N+ Sbjct: 173 DSNLIIILNDNR 184 >gi|212224280|ref|YP_002307516.1| transketolase, N-terminal section [Thermococcus onnurineus NA1] gi|212009237|gb|ACJ16619.1| transketolase, N-terminal section [Thermococcus onnurineus NA1] Length = 216 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 7/122 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ GIA A + + V GDG ++GQV+E+ A+ + L NVI +++ Sbjct: 94 GSLGQGLSVANGIALAKRADGKGEKVYVILGDGELDEGQVWEAAMTASHYGLDNVIAIVD 153 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + + + + + +F G V +++ ++ ++ A+ Y KG P Sbjct: 154 RNYFQLTGGTEETLRKEPLADKWRAF---GWTV--IEVPNERSAIETALDYAERIKGRPK 208 Query: 276 II 277 +I Sbjct: 209 VI 210 >gi|168240245|ref|ZP_02665177.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194451900|ref|YP_002044457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|229836077|sp|B4T8R3|DXS_SALHS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|194410204|gb|ACF70423.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205340061|gb|EDZ26825.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 620 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|239907067|ref|YP_002953808.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfovibrio magneticus RS-1] gi|239796933|dbj|BAH75922.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfovibrio magneticus RS-1] Length = 633 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 14/111 (12%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGRQ GG+S G S + F GH +S G+A A + Sbjct: 89 LTGRQEEFHTLRTMGGVS---GFPRPAESPFDHFGVGHS--STSISAALGLAMARDRKGE 143 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 D + GDG+ G YE N A W +I V+ +N+ ++ +V S Sbjct: 144 DHDVIAIIGDGSMTAGLAYEGLNQAGGWGGRLIVVLNDNEMSISKNVGALS 194 >gi|213962121|ref|ZP_03390385.1| transketolase domain protein [Capnocytophaga sputigena Capno] gi|213955127|gb|EEB66445.1| transketolase domain protein [Capnocytophaga sputigena Capno] Length = 792 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 16/168 (9%) Query: 186 CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT---------SVSRASAQTNFS 236 G+ + ++G +E N A + + ++ + +++Y + S+S A Sbjct: 170 TIGNASTSEGHFFEILNAAGVMQVPLVMSVWDDEYGISVPKEFHTIKQSISEALKGFVRD 229 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM--LTYRYRGHSMS-DPA 293 K+ F + +G D + KA R P+++ + LT + +GHS S Sbjct: 230 KKHKGFEL--FVANGWDYPTLYDIYQKAAKIAREEHIPVLVHVKELT-QPQGHSTSGSHE 286 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 Y++ E + + D I ++R+ ++ K+A+E +L IE +K +N Sbjct: 287 RYKSAERL-QWEKEFDCITKMREWIIAEKYATEEELVAIEQQAKKRVN 333 >gi|168232395|ref|ZP_02657453.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470796|ref|ZP_03076780.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194457160|gb|EDX45999.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333417|gb|EDZ20181.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 620 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|255586041|ref|XP_002533688.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis] gi|223526414|gb|EEF28696.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis] Length = 728 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A + + GDGA GQ YE+ N A Sbjct: 186 SEHDAFGAGHS--STSISAGLGMAVGRDLVGKNNHVIAVIGDGAMTAGQAYEAMNNAGYL 243 Query: 208 NLNVIYVIENNQ 219 + N+I ++ +N+ Sbjct: 244 DSNLIIILNDNK 255 >gi|254417132|ref|ZP_05030878.1| Thiamine pyrophosphate enzyme, central domain family [Microcoleus chthonoplastes PCC 7420] gi|196176110|gb|EDX71128.1| Thiamine pyrophosphate enzyme, central domain family [Microcoleus chthonoplastes PCC 7420] Length = 556 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 28/162 (17%) Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 G+++ G F+ H +G ++ G G+ A+ +K +V GDG+ Sbjct: 401 AGVARRVAGYAWRCKIPFSFFSAHSTAPMGWAIAAGVGVQLAHP----EKTVLVVTGDGS 456 Query: 192 ANQGQVYESFNIA--ALWNLNVIYVIENNQ-----YAMGTSVSRASAQT-----NFSKRG 239 F IA A + L +IYV+ NNQ YA S AS T N+ + Sbjct: 457 MRM----HGFEIATAARYQLPIIYVVCNNQAYGSVYARYAPQSAASQHTKLPPINWVQLA 512 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 S + G +V + A+K +++A+ + + P +IE +T Sbjct: 513 QSLGVAGTKVSTLP--ALKLAIEQAL----SRRQPFVIEAIT 548 >gi|197264168|ref|ZP_03164242.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197242423|gb|EDY25043.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 620 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|154251237|ref|YP_001412061.1| 1-deoxy-D-xylulose-5-phosphate synthase [Parvibaculum lavamentivorans DS-1] gi|154155187|gb|ABS62404.1| deoxyxylulose-5-phosphate synthase [Parvibaculum lavamentivorans DS-1] Length = 650 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 32/68 (47%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A + V GDGA + G YE+ N A N +I ++ +N ++ Sbjct: 127 ISSGLGMAVARDLKGGTNNVVAVIGDGAMSAGMAYEAMNNAGSMNSRLIIILNDNDMSIA 186 Query: 224 TSVSRASA 231 V SA Sbjct: 187 PPVGAMSA 194 >gi|257464219|ref|ZP_05628598.1| transketolase subunit A [Fusobacterium sp. D12] gi|317061739|ref|ZP_07926224.1| transketolase subunit A [Fusobacterium sp. D12] gi|313687415|gb|EFS24250.1| transketolase subunit A [Fusobacterium sp. D12] Length = 270 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + + V GDG +GQ++E+ AA + L N+ ++ Sbjct: 116 GSLGQGLSVANGMALNAKLFQEEYRVYVMMGDGELQEGQIWEAAMTAAHYKLDNLCAFVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + SV K+ +F + +DG + + + ++ A C+ P + Sbjct: 176 VNNLQIDGSVDVVMGVEPLDKKWEAFGWNVISIDGHNFEEIFSALETA-KTCKGK--PTL 232 Query: 277 IEMLTYRYRGHSM 289 I T + +G S Sbjct: 233 ILAKTVKGKGVSF 245 >gi|168818967|ref|ZP_02830967.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205343998|gb|EDZ30762.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084698|emb|CBY94489.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 620 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|166369006|ref|YP_001661279.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa NIES-843] gi|189027777|sp|B0JL88|DXS_MICAN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|166091379|dbj|BAG06087.1| 1-deoxyxylulose-5-phosphate synthase [Microcystis aeruginosa NIES-843] Length = 636 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 13/109 (11%) Query: 139 GKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 G+ H K+G G G G +S G G+A A + D V Sbjct: 82 GRYNDFHTLRQKDGIAGYLKRCESKFDHFGAGHASTSISAGLGMALARDAKGEDFKVVSI 141 Query: 187 FGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVSRASAQTN 234 GDGA G E+ N A L N N++ ++ +N+ ++ +V S N Sbjct: 142 IGDGALTGGMALEAINHAGHLPNTNIMVILNDNEMSISPNVGAISRYLN 190 >gi|118595514|sp|Q30Z99|DXS_DESDG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS Length = 638 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 50/221 (22%), Positives = 80/221 (36%), Gaps = 60/221 (27%) Query: 129 LTGRQGGIS-----KGKGGSMHMFSTKNGFYG-GHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ S +G G M + +G GH +S G+A A D Sbjct: 89 LTGRRDEFSTLRQYQGISGFPKMAESPYDHFGVGHS--STSISAAAGMAMARDLAGDDND 146 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS--AQTNFSKRGV 240 + GDG+ G +E N A ++ ++ +N+ ++ +V S N S R V Sbjct: 147 VIAIIGDGSMTAGLAFEGLNQAGHQGRRLLVILNDNEMSISKNVGALSLFLSRNLSSRWV 206 Query: 241 ---------------------------------SFNIPGM-----------QVDGMDIRA 256 SF PGM VDG D+R Sbjct: 207 RRMKRDVETWLKSVPGIGEEMLNYAKRSEHSLKSFFTPGMLFEAFRFNYVGPVDGHDVRN 266 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGH--SMSDPANY 295 + M A RA P+++ +LT + +G+ + S+P + Sbjct: 267 LAKVMQMA----RALDEPVLLHVLTKKGKGYEPAESNPTYF 303 >gi|160888731|ref|ZP_02069734.1| hypothetical protein BACUNI_01149 [Bacteroides uniformis ATCC 8492] gi|317479521|ref|ZP_07938652.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides sp. 4_1_36] gi|156861630|gb|EDO55061.1| hypothetical protein BACUNI_01149 [Bacteroides uniformis ATCC 8492] gi|316904341|gb|EFV26164.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides sp. 4_1_36] Length = 586 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 10/147 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G VSL +G+A A + + GDG+ + G+ +E N+ A N I ++ + Sbjct: 113 GHTSTSVSLASGLAKARDLKGEAGNVIAVIGDGSLSGGEAFEGLNVGAELGTNFIVIVND 172 Query: 218 NQYAMGTS---VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD-----KAVAYCR 269 NQ ++ + + R Q ++ N + G D VK D +A + Sbjct: 173 NQMSIAENHGGLYRNLQQLRETEGQAPCNY--FKAMGYDYLYVKDGNDVEQLIEAFREVK 230 Query: 270 AHKGPIIIEMLTYRYRGHSMSDPANYR 296 K P+++ + T + +G+ +++ R Sbjct: 231 DKKHPVVVHINTLKGKGYKLAEEQKER 257 >gi|56552494|ref|YP_163333.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp. mobilis ZM4] gi|56544068|gb|AAV90222.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp. mobilis ZM4] Length = 660 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + G + S + F H +S G A A+K SD Sbjct: 97 LTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAAHS--STSISAALGFAMASKLSDSDDK 154 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 V GDG+ G YE+ N A +I ++ +N+ ++ V S+ Sbjct: 155 AVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDNEMSISPPVGALSS 203 >gi|24373494|ref|NP_717537.1| alpha-ketoglutarate decarboxylase [Shewanella oneidensis MR-1] gi|24347794|gb|AAN54981.1|AE015636_5 2-oxoglutarate dehydrogenase, E1 component [Shewanella oneidensis MR-1] Length = 939 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 11/116 (9%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTS----VSRASAQTNF 235 + GD A QG V E+FN++ V I ++ NNQ TS V T+ Sbjct: 359 ITIHGDSAITGQGIVQETFNMSQTRGFKVGGSIRIVVNNQVGFTTSNHYDVRSTEYCTDI 418 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +K P V+ D AV AV Y K ++I+++ YR GH+ +D Sbjct: 419 AKM---VQAPIFHVNSDDPEAVAFVAQLAVDYRNEFKRDVVIDLVCYRRHGHNEAD 471 >gi|238898944|ref|YP_002924626.1| 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex, thiamin-binding [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466704|gb|ACQ68478.1| 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex, thiamin-binding [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 935 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 32/248 (12%) Query: 58 LMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM--KMSLTEGDQMITAYREHGHI 115 L++L++ AGQ +V G H G+ V++ + KM D+ ++EH Sbjct: 236 LVILLKELIRHAGQQGMKEVVLGMAHR--GRLNVLINVLGKMPQDLFDEFAGKHKEH--- 290 Query: 116 LACGVDASKIMAELTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 L G ++ QG S + +GG +H+ F H + + V +G+ A Sbjct: 291 LGTG--------DVKYHQGFSSDIETEGGLIHL---ALAFNPSHLEIVSPVVIGS--VRA 337 Query: 174 NKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGT 224 + R SDK V GD A QG V E+ N++ V + ++ NNQ T Sbjct: 338 RRDRLSDKASNKVFPVTIHGDAAITGQGVVQETLNMSRARGYEVGGTVRIVINNQIGFTT 397 Query: 225 SVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S + + T + + P V+ D AV A+ + K +I+++ YR Sbjct: 398 SNPQDARSTEYCTDVAKMVQAPIFHVNADDPEAVAFVARLALDFRNTFKRDFMIDLVCYR 457 Query: 284 YRGHSMSD 291 GH+ +D Sbjct: 458 RHGHNEAD 465 >gi|237752973|ref|ZP_04583453.1| 1-deoxyxylulose-5-phosphate synthase [Helicobacter winghamensis ATCC BAA-430] gi|229375240|gb|EEO25331.1| 1-deoxyxylulose-5-phosphate synthase [Helicobacter winghamensis ATCC BAA-430] Length = 620 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/185 (20%), Positives = 77/185 (41%), Gaps = 47/185 (25%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S ++ F GH +SLG G A A + S +I V GDGA + G YE+ N Sbjct: 109 SVQDYFIAGHS--STSISLGVGAAKAFNLKGSKQIPVALIGDGAMSAGLAYEALNELGDR 166 Query: 208 NLNVIYVIENNQYA---------------------------MGTSVSRASAQTNFSKR-- 238 ++ ++ +N+ + +G+++++ T +KR Sbjct: 167 KYPMVIILNDNEMSIAEPIGAISKYLSQIIAGKFVQGIKNKIGSAINKMPNATYIAKRFE 226 Query: 239 --------GVSFNIPGMQ----VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 G+ F G++ +DG +++ + T+ A + + PI++ T + +G Sbjct: 227 ESLKLITPGILFEELGLEYIGPIDGHNLKEIINTLKLA----KNTQKPIVVHAQTLKGKG 282 Query: 287 HSMSD 291 ++ ++ Sbjct: 283 YTPAE 287 >gi|297618735|ref|YP_003706840.1| transketolase domain-containing protein [Methanococcus voltae A3] gi|297377712|gb|ADI35867.1| Transketolase domain protein [Methanococcus voltae A3] Length = 285 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 1/116 (0%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G S G+A + + + GDG +GQV+E+ A + L N Sbjct: 123 GIEANTGSLGQGFSASVGVALGCRLDKYENNVFTLLGDGECQEGQVWEAAMAAHHYKLDN 182 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 +I +++ N+ + + + +F ++DG D +A+ T++ A A Sbjct: 183 LIAIVDRNKLQIDGCTEDVMCLGDVKAKFDAFGWNTFEIDGHDYKAIIETIETAKA 238 >gi|56414423|ref|YP_151498.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363343|ref|YP_002142980.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81599422|sp|Q5PFR6|DXS_SALPA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|229836079|sp|B5BDB0|DXS_SALPK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|56128680|gb|AAV78186.1| 1-deoxyxylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094820|emb|CAR60353.1| 1-deoxyxylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 620 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 HTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|317179246|dbj|BAJ57034.1| transketolase [Helicobacter pylori F30] Length = 641 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLC-GDGDLQEGISYESASLAGHLNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + VI ++NQ ++ +++ S R V+ N ++ DG D +A+ +++A Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFVAQNWEVLECDGHDYQAIHNALEEA 233 >gi|299768641|ref|YP_003730667.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter sp. DR1] gi|298698729|gb|ADI89294.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter sp. DR1] Length = 634 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 35/218 (16%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEE-KAGQLYGM 75 L + +R T +D +D P Q+L L++ +E + LY Sbjct: 2 LYTEIPTQRPVTPLLDAIDHP-------------QQLRQLEHSQLVQVADELRQYILYAA 48 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGR 132 G GG +G + V + T D+++ ++ + H + LTGR Sbjct: 49 GQSGGHFGANLGVVELTVALHYCFNTPNDRLVWDVGHQAYPHKV------------LTGR 96 Query: 133 QGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCF- 187 + ++ + K G + + + G+ +S G G++ A +Y+ +D VVC Sbjct: 97 REQMTTIRSKNGLAAFPAREESVFDTFGVGHSSTAISAGLGMSLARRYQ-NDPCEVVCIV 155 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 GDGA G +E+ N A + ++I V+ +N ++ S Sbjct: 156 GDGAMTAGMAFEAMNDAVAHDADLIVVLNDNDMSISCS 193 >gi|261245705|emb|CBG23501.1| 1-deoxyxylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 620 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|15617062|ref|NP_240275.1| 1-deoxy-D-xylulose-5-phosphate synthase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11131990|sp|P57536|DXS_BUCAI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|25311117|pir||A84984 dxs protein [imported] - Buchnera sp. (strain APS) gi|10039127|dbj|BAB13161.1| dxs protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 608 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 8/104 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR I S K +H F + + GH LG IA + R I Sbjct: 88 LTGRGEKINSIRKKNGLHSFPCREESEYDSLSVGHSSTSISAGLGMSIAAEKEGRNRKTI 147 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 C++ GDGA G +E+ N A N++ ++ +NQ ++ +V Sbjct: 148 CII--GDGAMTAGMAFEAINHAGEIQSNLLVILNDNQMSISRNV 189 >gi|16763802|ref|NP_459417.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62179033|ref|YP_215450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615390|ref|YP_001589355.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167992272|ref|ZP_02573370.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168261145|ref|ZP_02683118.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465512|ref|ZP_02699394.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194443160|ref|YP_002039664.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194738296|ref|YP_002113455.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|198245605|ref|YP_002214376.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390765|ref|ZP_03217376.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205351733|ref|YP_002225534.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207855903|ref|YP_002242554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224582260|ref|YP_002636058.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|21263525|sp|Q8ZRD1|DXS_SALTY RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|75484590|sp|Q57SE2|DXS_SALCH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|189027785|sp|A9MX09|DXS_SALPB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|226801552|sp|B5FKS7|DXS_SALDC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|226801553|sp|B5QTH0|DXS_SALEP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|226801554|sp|B5R6S3|DXS_SALG2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|229836078|sp|B4SWR4|DXS_SALNS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|229836080|sp|B4TMA2|DXS_SALSV RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|254782083|sp|C0Q7U7|DXS_SALPC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|16418927|gb|AAL19376.1| 1-deoxyxylulose-5-phosphate synthase; flavoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62126666|gb|AAX64369.1| 1-deoxyxylulose-5-phosphate synthase; flavoprotein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364754|gb|ABX68522.1| hypothetical protein SPAB_03161 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401823|gb|ACF62045.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194713798|gb|ACF93019.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631764|gb|EDX50284.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197940121|gb|ACH77454.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603210|gb|EDZ01756.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205271514|emb|CAR36332.1| 1-deoxyxylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205329467|gb|EDZ16231.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205350036|gb|EDZ36667.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707706|emb|CAR31990.1| 1-deoxyxylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224466787|gb|ACN44617.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|267992134|gb|ACY87019.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157033|emb|CBW16516.1| 1-deoxyxylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911455|dbj|BAJ35429.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|322713494|gb|EFZ05065.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323128741|gb|ADX16171.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622124|gb|EGE28469.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326626768|gb|EGE33111.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332987370|gb|AEF06353.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 620 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|260753843|ref|YP_003226736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553206|gb|ACV76152.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 650 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 32/68 (47%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G A A+K SD V GDG+ G YE+ N A +I ++ +N+ ++ Sbjct: 126 ISAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDNEMSIS 185 Query: 224 TSVSRASA 231 V S+ Sbjct: 186 PPVGALSS 193 >gi|271499751|ref|YP_003332776.1| 2-oxoglutarate dehydrogenase, E1 subunit [Dickeya dadantii Ech586] gi|270343306|gb|ACZ76071.1| 2-oxoglutarate dehydrogenase, E1 subunit [Dickeya dadantii Ech586] Length = 935 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 5/156 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+ N++ +V I ++ NNQ TS + T + + Sbjct: 352 LPITIHGDAAIAGQGVVQETLNMSKARGYDVGGTIRIVINNQIGFTTSNPLDARSTEYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 G P V+ D AV A+ + + + I+++ YR GH+ +D + Sbjct: 412 DIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFQRDVFIDLVCYRRHGHNEADEPSAT 471 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +++ + P + RL K A+ D E+ Sbjct: 472 QPVMYQKIKKHPTPRKIYADRLEQQKIATLEDATEM 507 >gi|268590348|ref|ZP_06124569.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Providencia rettgeri DSM 1131] gi|291314258|gb|EFE54711.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Providencia rettgeri DSM 1131] Length = 937 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 5/156 (3%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A QG V E+ N++ V + ++ NNQ TS + + T + Sbjct: 354 LPITIHGDSAVTGQGVVQETLNMSQARGYEVGGTVRIVINNQIGFTTSNPKDTRSTEYCT 413 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 V P V+ D AV A+ + K ++I+++ YR GH+ +D + Sbjct: 414 DIVKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEADEPSAT 473 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +++ + P + RL+ S D+ E+ Sbjct: 474 QPVMYQKIKQHPTPRKIYADRLIAENVLSANDVTEM 509 >gi|224438211|ref|ZP_03659146.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter cinaedi CCUG 18818] Length = 639 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 74/186 (39%), Gaps = 48/186 (25%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +SLG G A A + ++ + V+ GDG+ + G VYE+ N Sbjct: 126 SASDYFIAGHS--STSISLGVGAAKARALQNNEYMPVIMIGDGSMSAGLVYEALNELGDR 183 Query: 208 NLNVIYVIENNQYAMGTSVSRAS----------------------------AQTNFSKR- 238 ++ V+ +N+ ++ + S + T +KR Sbjct: 184 KYPMVIVLNDNEMSIAKPIGAISNYLSQILTTPLYQKTRHSIKKVLQKMPDSATYLAKRF 243 Query: 239 ---------GVSFNIPGMQ----VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 G+ F G+ +DG +I + T+ +A + K P+II T + + Sbjct: 244 EESLKLITPGILFEELGLDYVGPIDGHNIELIINTLQRA----KEMKKPVIIHAQTLKGK 299 Query: 286 GHSMSD 291 G+ +++ Sbjct: 300 GYEIAE 305 >gi|187931658|ref|YP_001891642.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] gi|229813278|sp|B2SGK5|DXS_FRATM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|187712567|gb|ACD30864.1| 1-deoxyxylulose-5-phosphate synthase [Francisella tularensis subsp. mediasiatica FSC147] Length = 615 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 87/223 (39%), Gaps = 66/223 (29%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS S + T F GH +S G+A A++ + Sbjct: 84 LTGRKDKLVTIKKDGGISGFPKRSESEYDT---FGVGHS--STSISAALGMAIADRLQGK 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK-- 237 V GDGA G +E+ N A +++ ++ +N+ ++ +V SA +FSK Sbjct: 139 SSNTVAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSA--HFSKII 196 Query: 238 ------------RGVSFNIP--------------GM----------------QVDGMDIR 255 + V NIP GM +DG D+ Sbjct: 197 SGGFYNSIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDV- 255 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYR 296 + K + + HKGP ++ ++T + +G++ SDP + Sbjct: 256 ---TELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFH 295 >gi|197249621|ref|YP_002145404.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|226801551|sp|B5EXG3|DXS_SALA4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|197213324|gb|ACH50721.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 620 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|16759399|ref|NP_455016.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142829|ref|NP_806171.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052894|ref|ZP_03345772.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213647258|ref|ZP_03377311.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289825065|ref|ZP_06544417.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|21263521|sp|Q8Z8X3|DXS_SALTI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|25311148|pir||AF0554 1-deoxyxylulose-5-phosphate synthase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501690|emb|CAD08878.1| 1-deoxyxylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhi] gi|29138461|gb|AAO70031.1| 1-deoxyxylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 620 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|292491350|ref|YP_003526789.1| deoxyxylulose-5-phosphate synthase [Nitrosococcus halophilus Nc4] gi|291579945|gb|ADE14402.1| deoxyxylulose-5-phosphate synthase [Nitrosococcus halophilus Nc4] Length = 640 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 4/107 (3%) Query: 129 LTGR--QGGISKGKGGSMHMFSTKNGFYG--GHGIVGAQVSLGTGIAFANKYRRSDKICV 184 LTGR Q G + GG + Y G G +S G+A A K R ++ + Sbjct: 87 LTGRREQLGTIRQAGGLAPFPARHESPYDIFGVGHSSTSISAALGMAIAAKQRGENRKSI 146 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 GDG G YE+ + A + +++ ++ +N+ ++ +V S+ Sbjct: 147 AIIGDGGMTAGMAYEALDHAGALDADLLVILNDNEMSISPNVGAISS 193 >gi|149909333|ref|ZP_01897989.1| 1-deoxy-D-xylulose-5-phosphate synthase [Moritella sp. PE36] gi|149807650|gb|EDM67598.1| 1-deoxy-D-xylulose-5-phosphate synthase [Moritella sp. PE36] Length = 621 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 6/120 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGIVG---AQVSLGTGIAFANKYRRSDKIC 183 LTGR+ +S + KGG +H F ++ H VG +S G+A A ++ Sbjct: 88 LTGRRDRMSTIRQKGG-LHPFPWRDESEYDHLNVGHSSTSISAALGLAVAADQEDKNRKT 146 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 V GDGA G +E+ N A + +V+ ++ +N ++ +V + GV+++ Sbjct: 147 VAIIGDGAITGGMAFEALNHAGHIDKDVLVILNDNDMSISANVGAVNKHLAKLLSGVAYS 206 >gi|126729027|ref|ZP_01744842.1| putative transketolase alpha subunit protein [Sagittula stellata E-37] gi|126710957|gb|EBA10008.1| putative transketolase alpha subunit protein [Sagittula stellata E-37] Length = 293 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 3/109 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G AF K ++S DG +G +E+ A+ L N+I +++ Sbjct: 133 GSLGHGLGIAVGAAFGLKRKKSAAFVYNMMSDGELGEGSTWEAVMAASSHQLDNLICIVD 192 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N+Q A G + + A A+ + + + +F +VDG D+ A+ D A Sbjct: 193 FNDQQADGPTTA-ALAKGDEAPKWAAFGWHAQEVDGNDLDALVQAFDTA 240 >gi|62511140|sp|Q60HC7|TKT_MACFA RecName: Full=Transketolase; Short=TK gi|52782283|dbj|BAD51988.1| transketolase [Macaca fascicularis] Length = 623 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSDPAPLQHQMDIHQKRCEAFGWHAIIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|163761048|ref|ZP_02168126.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hoeflea phototrophica DFL-43] gi|162281829|gb|EDQ32122.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hoeflea phototrophica DFL-43] Length = 643 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A++ + + V GDGA + G +E+ N A Sbjct: 112 SEYDDFGAGHS--STSISAGLGMAVASQLQNKPRHVVSVIGDGAMSAGMAFEALNNAGAL 169 Query: 208 NLNVIYVIENNQYAMGTSVSRASA 231 + +I ++ +N ++ SA Sbjct: 170 DARLIVILNDNDMSIAPPTGAMSA 193 >gi|118595489|sp|Q5NM38|DXS2_ZYMMO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName: Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP synthase 2; Short=DXPS 2 Length = 650 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 32/68 (47%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G A A+K SD V GDG+ G YE+ N A +I ++ +N+ ++ Sbjct: 126 ISAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDNEMSIS 185 Query: 224 TSVSRASA 231 V S+ Sbjct: 186 PPVGALSS 193 >gi|323465881|gb|ADX69568.1| 1-deoxy-d-xylulose-5-phosphate synthase 2 [Lactobacillus helveticus H10] Length = 589 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 14/144 (9%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G ++L TG+A A + + GDG+ G YE N AA+ N++ Sbjct: 124 YYAVGHTSTSIALATGMAKARDLMGGHENIMALIGDGSMTGGLAYEGLNNAAIKKHNLVV 183 Query: 214 VIENNQYAMGTSVS------RASAQTNFSKRGVSFNIPGMQ----VDGMDIRAVKATMDK 263 V+ +NQ ++ +V + +N + F G DG DI+ +M + Sbjct: 184 VVNDNQMSIDENVGGLVTALKKLRDSNGETKENPFTAMGFDYRYVADGNDIK----SMIE 239 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGH 287 A + PI++ + T + +G+ Sbjct: 240 AFKAVKDVDHPILLHINTLKGKGY 263 >gi|304406834|ref|ZP_07388489.1| 2-oxoglutarate dehydrogenase, E1 subunit [Paenibacillus curdlanolyticus YK9] gi|304344367|gb|EFM10206.1| 2-oxoglutarate dehydrogenase, E1 subunit [Paenibacillus curdlanolyticus YK9] Length = 956 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 6/114 (5%) Query: 183 CVVCFGDGA-ANQGQVYESFNIAAL---WNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 +V GD A +G V E+ NI L N I+VI NN+ T+ S S T++S Sbjct: 359 AIVMHGDAAFPGEGIVTETLNIGQLKGYTNGGSIHVIVNNKIGF-TTESVDSRSTHYSSD 417 Query: 239 GVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 F IP + V+ D A A Y + +I+++ YR GH+ +D Sbjct: 418 PAKGFEIPIVHVNADDPEACLLAARIATEYRTKFQKDFLIDLIGYRRYGHNETD 471 >gi|302334864|ref|YP_003800071.1| transketolase subunit A [Olsenella uli DSM 7084] gi|301318704|gb|ADK67191.1| transketolase subunit A [Olsenella uli DSM 7084] Length = 284 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G S GIA A R S + GDG N+GQ +E+F A L+ I +I+ Sbjct: 118 GSLGQGTSEAAGIAQALAMRGSTSYTYLFVGDGELNEGQCWEAFQFIAAKRLSRCIVLID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 +N+ + + + +K+ +F VDG Sbjct: 178 DNKKQLDGTTDEVMYNFDLAKKMEAFGFSTQVVDG 212 >gi|269468795|gb|EEZ80399.1| deoxyxylulose-5-phosphate synthase [uncultured SUP05 cluster bacterium] Length = 600 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 12/103 (11%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH K+G G G G +S GIA N+ + + Sbjct: 78 ILTGRKNKMHTLRKKDGLSGFTKMSESKHDSFGAGHSSTSISAALGIAIGNQINKIEHKS 137 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + GDGA G +E+ N A + +++ ++ +N ++ +V Sbjct: 138 IAIIGDGALTGGMSFEALNHAGDSDADLLIILNDNDMSISKNV 180 >gi|261341312|ref|ZP_05969170.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Enterobacter cancerogenus ATCC 35316] gi|288316616|gb|EFC55554.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Enterobacter cancerogenus ATCC 35316] Length = 935 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 11/201 (5%) Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR--SDKIC-VVCFGDGA-ANQG 195 +GG +H+ F H + + V +G+ A ++ S+K+ + GD A QG Sbjct: 310 EGGQVHL---ALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAITGQG 366 Query: 196 QVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDG 251 V E+ N++ V + ++ NNQ TS + T + + G P V+ Sbjct: 367 VVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNA 426 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPI 311 D AV A+ Y K ++I++ YR GH+ +D + +++ + P Sbjct: 427 DDPEAVAFVTRLALDYRNTFKRDVLIDLFCYRRHGHNEADEPSATQPLMYQKIKKHPTPR 486 Query: 312 EQVRKRLLHNKWASEGDLKEI 332 + RL K A+ D E+ Sbjct: 487 KIYADRLEAEKVATLEDATEL 507 >gi|110598418|ref|ZP_01386690.1| Transketolase-like [Chlorobium ferrooxidans DSM 13031] gi|110339952|gb|EAT58455.1| Transketolase-like [Chlorobium ferrooxidans DSM 13031] Length = 303 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/148 (20%), Positives = 65/148 (43%), Gaps = 7/148 (4%) Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQ 219 G ++G + ++SD C++ GDG +GQ++E+ AA + L N+I +++ N Sbjct: 141 GLSAAVGAALGLRMDGKQSDVFCLM--GDGECQEGQIWEAAMSAAHYGLGNLIGIVDYNN 198 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 + V+ + F+ + +F +G DI +T++ A + + +++ Sbjct: 199 LQIDGEVTDVMSVEPFADKWRAFGWDVCHCNGNDIEDFVSTIENLRAGGKRSRPSVVLAT 258 Query: 280 LTYRYRGH----SMSDPANYRTREEINE 303 H SM D +N+ + E Sbjct: 259 TVMGKGVHFFEGSMPDNSNWHGKPPSKE 286 >gi|325265405|ref|ZP_08132129.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium sp. D5] gi|324029406|gb|EGB90697.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium sp. D5] Length = 624 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 8/112 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G K G M F + + F GH +S G G A + Sbjct: 80 LTGRRAGFDDLRKYGGMSGFPKRKESECDAFDTGHS--STSISAGLGYVAARDILGEEHY 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 V GDGA G YE+ N A+ N I V+ +N ++ +V S N Sbjct: 138 VVSIIGDGAMTGGMAYEALNNASRLKSNFIIVLNDNNMSISENVGGMSRYLN 189 >gi|257876571|ref|ZP_05656224.1| acetolactate synthase [Enterococcus casseliflavus EC20] gi|257810737|gb|EEV39557.1| acetolactate synthase [Enterococcus casseliflavus EC20] Length = 566 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 26/139 (18%) Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 GG G +G + G G+ FA+ +K+ VV GDG + F I + LN+ +V Sbjct: 418 GGLGTMGYGIPAGIGVQFAH----PEKMVVVFVGDGGFQMTN--QEFAILNEYGLNIKFV 471 Query: 215 IENN-------QYAMGTSVSRASA-----QTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 + NN Q+ R SA Q +F K ++ I G ++D A + +D Sbjct: 472 LLNNCSLGMVRQWQETFHGKRRSASVFAQQPDFVKLAQAYGIEGCRID-----APEQLVD 526 Query: 263 K-AVAYCRAHKGPIIIEML 280 + A A+ +A GP +IE++ Sbjct: 527 QLAAAFSQA--GPQLIEVM 543 >gi|255319839|ref|ZP_05361044.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter radioresistens SK82] gi|262380371|ref|ZP_06073525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter radioresistens SH164] gi|255303158|gb|EET82370.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter radioresistens SK82] gi|262297817|gb|EEY85732.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter radioresistens SH164] Length = 637 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKN-----GFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ I+ + K G + F ++ F GH +S G G+A A +Y+ + Sbjct: 93 LTGRREQITTIRAKDG-LAAFPARDESEFDTFGVGHS--STAISAGLGMALARRYQNNPC 149 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + ++I V+ +N ++ S Sbjct: 150 EVVCVVGDGAMTAGMAFEAMNDAVAHDADLIVVLNDNDMSISQST 194 >gi|238020012|ref|ZP_04600438.1| hypothetical protein VEIDISOL_01888 [Veillonella dispar ATCC 17748] gi|237863536|gb|EEP64826.1| hypothetical protein VEIDISOL_01888 [Veillonella dispar ATCC 17748] Length = 590 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 30/142 (21%), Positives = 66/142 (46%), Gaps = 10/142 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G +SL +G+A A + + + GDG+ + G+ +E + AA + N+I ++ + Sbjct: 118 GHTSTSISLASGLATARNLKGDSENIIAIIGDGSLSGGEAFEGLDYAATLDSNMIIIVND 177 Query: 218 NQYAMGTS---VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK-----ATMDKAVAYCR 269 N ++ + + R + S S NI + G+D R V T+ + Sbjct: 178 NDQSIAENHGGLYRGLRELRESNGESSNNI--FKALGLDYRFVADGNDLETLINVFKDVK 235 Query: 270 AHKGPIIIEMLTYRYRGHSMSD 291 PI++ ++T + +G+++++ Sbjct: 236 DINHPIVLHIVTQKGKGYAIAE 257 >gi|222824348|ref|YP_002575922.1| 1-deoxy-D-xylulose-5-phosphate synthase [Campylobacter lari RM2100] gi|222539569|gb|ACM64670.1| 1-deoxy-D-xylulose-5-phosphate synthase [Campylobacter lari RM2100] Length = 609 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 43/212 (20%), Positives = 80/212 (37%), Gaps = 60/212 (28%) Query: 139 GKGGSMHMFSTKNG------------FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 GK S H NG F GH +SL G A + + D++ VV Sbjct: 79 GKINSFHTLRQFNGLSGYTKPDEGDYFIAGHS--STSISLAVGACKAIRLKNEDRLPVVL 136 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT---SVSRASAQT-------NFS 236 GDGA + G YE+ N + ++ +N+ ++ ++S+ +Q F Sbjct: 137 IGDGALSAGMAYEALNELGDREYPCVIILNDNEMSISKPIGAISKYLSQAMATQFYQKFK 196 Query: 237 KR---------------------GVSFNIPGM-----------QVDGMDIRAVKATMDKA 264 KR G+ PG+ +DG ++ V +++A Sbjct: 197 KRIENLLEYFPQGASYMAKRFEEGLRLITPGLLFEELGLEYIGPIDGHNLNEVINALNQA 256 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 +A K P ++ T + +G+++++ N + Sbjct: 257 ----KAMKKPCVVHAQTIKGKGYALAEGKNAK 284 >gi|254432745|ref|ZP_05046448.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanobium sp. PCC 7001] gi|197627198|gb|EDY39757.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanobium sp. PCC 7001] Length = 641 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYV 214 G G +S G+A A R CV GDGA G E+ N A L N++ V Sbjct: 111 GAGHASTSISAALGMALARDRRGETFKCVAVIGDGALTGGMALEAINHAGHLPRTNLLVV 170 Query: 215 IENNQYAMGTSVSRASAQTN 234 + +N ++ V S N Sbjct: 171 LNDNDMSISPPVGALSTHLN 190 >gi|168237535|ref|ZP_02662593.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197289520|gb|EDY28883.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 620 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|56708107|ref|YP_170003.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670578|ref|YP_667135.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. tularensis FSC198] gi|134301918|ref|YP_001121887.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. tularensis WY96-3418] gi|254370591|ref|ZP_04986596.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. tularensis FSC033] gi|81597477|sp|Q5NG39|DXS_FRATT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|123359472|sp|Q14HJ1|DXS_FRAT1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|166198618|sp|A4IXW5|DXS_FRATW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|56604599|emb|CAG45651.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320911|emb|CAL09034.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella tularensis subsp. tularensis FSC198] gi|134049695|gb|ABO46766.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. tularensis WY96-3418] gi|151568834|gb|EDN34488.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. tularensis FSC033] gi|282159307|gb|ADA78698.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. tularensis NE061598] Length = 615 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 87/223 (39%), Gaps = 66/223 (29%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS S + T F GH +S G+A A++ + Sbjct: 84 LTGRKDKLVTIKKDGGISGFPKRSESEYDT---FGVGHS--STSISAALGMAIADRLQGK 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK-- 237 V GDGA G +E+ N A +++ ++ +N+ ++ +V SA +FSK Sbjct: 139 SSNTVAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSA--HFSKII 196 Query: 238 ------------RGVSFNIP--------------GM----------------QVDGMDIR 255 + V NIP GM +DG D+ Sbjct: 197 SGGFYNSIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDV- 255 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYR 296 + K + + HKGP ++ ++T + +G++ SDP + Sbjct: 256 ---TELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFH 295 >gi|303239898|ref|ZP_07326421.1| deoxyxylulose-5-phosphate synthase [Acetivibrio cellulolyticus CD2] gi|302592608|gb|EFL62333.1| deoxyxylulose-5-phosphate synthase [Acetivibrio cellulolyticus CD2] Length = 624 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S GIA A ++ + + GDGA G +E+ N A + Sbjct: 107 SEHDSFNTGHS--STSISAALGIAKARDLKKENNSVIAVIGDGALTGGMAFEALNNAGRF 164 Query: 208 NLNVIYVIENNQYAMGTSV 226 N I V+ +N+ ++ +V Sbjct: 165 PNNFIVVLNDNEMSISKNV 183 >gi|219681814|ref|YP_002468200.1| 1-deoxy-D-xylulose-5-phosphate synthase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682369|ref|YP_002468753.1| 1-deoxy-D-xylulose-5-phosphate synthase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471516|ref|ZP_05635515.1| 1-deoxy-D-xylulose-5-phosphate synthase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254782064|sp|B8D9P1|DXS_BUCA5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|254782065|sp|B8D7Z3|DXS_BUCAT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|219622102|gb|ACL30258.1| 1-deoxy-D-xylulose-5-phosphate synthase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624657|gb|ACL30812.1| 1-deoxy-D-xylulose-5-phosphate synthase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086190|gb|ADP66272.1| 1-deoxy-D-xylulose-5-phosphate synthase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086766|gb|ADP66847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087853|gb|ADP67932.1| 1-deoxy-D-xylulose-5-phosphate synthase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 608 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 8/104 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR I S K +H F + + GH LG IA + R I Sbjct: 88 LTGRGEKINSIRKKNGLHSFPCREESEYDSLSVGHSSTSISAGLGMSIAAEKEGRNRKTI 147 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 C++ GDGA G +E+ N A N++ ++ +NQ ++ +V Sbjct: 148 CII--GDGAMTAGMAFEAINHAGEIQSNLLVILNDNQMSISRNV 189 >gi|60616022|gb|AAX31156.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays] Length = 303 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +LG +A R++ I V+ GDGA GQ YE+ N + Sbjct: 31 SAHDAFGVGHSSTSISAALGMAVARDLLGRKNHVISVI--GDGAMTAGQAYEAMNNSGYL 88 Query: 208 NLNVIYVIENNQ 219 + N+I V+ +N+ Sbjct: 89 DANMIVVLNDNK 100 >gi|311087354|gb|ADP67434.1| 1-deoxy-D-xylulose-5-phosphate synthase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 608 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 8/104 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR I S K +H F + + GH LG IA + R I Sbjct: 88 LTGRGEKINSIRKKNGLHSFPCREESEYDSLSVGHSSTSISAGLGMSIAAEKEGRNRKTI 147 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 C++ GDGA G +E+ N A N++ ++ +NQ ++ +V Sbjct: 148 CII--GDGAMTAGMAFEAINHAGEIQSNLLVILNDNQMSISRNV 189 >gi|170692550|ref|ZP_02883712.1| Transketolase domain protein [Burkholderia graminis C4D1M] gi|170142206|gb|EDT10372.1| Transketolase domain protein [Burkholderia graminis C4D1M] Length = 287 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 3/111 (2%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + S F DG ++G ++E A+ Sbjct: 109 MASYTPGMEMSGGSLGHGLTIAVGRCLGLKRKGSKSFVYTLFSDGELDEGAIWEGIMSAS 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 W L N+I +++ NNQ A G S ++ A ++ +F +VDG DI Sbjct: 169 HWKLDNLIAIVDVNNQQADGPS-TQVMAFEPLVEKLEAFGWFTQRVDGNDI 218 >gi|88859184|ref|ZP_01133825.1| 1-deoxy-D-xylulose 5-phosphate synthase (DXP synthase) [Pseudoalteromonas tunicata D2] gi|88819410|gb|EAR29224.1| 1-deoxy-D-xylulose 5-phosphate synthase (DXP synthase) [Pseudoalteromonas tunicata D2] Length = 620 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 16/105 (15%) Query: 136 ISKGKGGSMHMFSTKNG--------------FYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH KNG F GH +S G+A A K ++ Sbjct: 87 ILTGRRDQMHTIRQKNGLHPFPYREESQYDTFSVGHS--STSISAALGMAIAAKKEAKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 145 KVVAVIGDGAVTAGMAFEAMNHAGDLDADMLVILNDNEMSISENV 189 >gi|317492933|ref|ZP_07951357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919055|gb|EFV40390.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 621 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 64/221 (28%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ I+ + KGG +H F ++ GH LG +A + + Sbjct: 88 LTGRRDRIATIRQKGG-LHPFPWRDESEYDVLSVGHSSTSISAGLGMAVAAEREGKNRRT 146 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS---AQ------ 232 +CV+ GDGA G +E+ N A +++ V+ +N+ ++ +V + AQ Sbjct: 147 VCVI--GDGAITAGMAFEAMNHAGDIKADMLVVLNDNEMSISENVGALNNHLAQLLSGKL 204 Query: 233 ------------------------------------TNFSKRGVSFNIPGMQVDGMDIRA 256 T F + G ++ P VDG D++A Sbjct: 205 YSSLREGGKKVLSGLPPIKELVKRTEEHLKGMVVPGTLFEELGFNYIGP---VDGHDVQA 261 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 + AT+ R KGP ++ ++T + +G++ + DP ++ Sbjct: 262 LAATLKN----MRDLKGPQLLHIMTKKGKGYAPAEKDPISW 298 >gi|242238590|ref|YP_002986771.1| 2-oxoglutarate dehydrogenase E1 component [Dickeya dadantii Ech703] gi|242130647|gb|ACS84949.1| 2-oxoglutarate dehydrogenase, E1 subunit [Dickeya dadantii Ech703] Length = 935 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A + QG V E+ N++ V I ++ NNQ TS R T + + Sbjct: 352 LPITIHGDAAISGQGVVQETLNMSKARGYEVGGTIRIVINNQVGFTTSNPRDVRSTEYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 G P V+ D AV A+ + K + I+++ YR GH+ +D Sbjct: 412 DIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEAD 466 >gi|254369377|ref|ZP_04985389.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. holarctica FSC022] gi|157122327|gb|EDO66467.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. holarctica FSC022] Length = 615 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 87/223 (39%), Gaps = 66/223 (29%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS S + T F GH +S G+A A++ + Sbjct: 84 LTGRKDKLVTIKKDGGISGFPKRSESEYDT---FGVGHS--STSISAALGMAIADRLQGK 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK-- 237 V GDGA G +E+ N A +++ ++ +N+ ++ +V SA +FSK Sbjct: 139 SSNTVAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSA--HFSKII 196 Query: 238 ------------RGVSFNIP--------------GM----------------QVDGMDIR 255 + V NIP GM +DG D+ Sbjct: 197 SGGFYNSIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDV- 255 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYR 296 + K + + HKGP ++ ++T + +G++ SDP + Sbjct: 256 ---TELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFH 295 >gi|78712776|gb|ABB49953.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus str. MIT 9312] Length = 636 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 10/141 (7%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYV 214 G G +S G+A A + + CV GDGA G E+ N A L N ++ V Sbjct: 118 GAGHASTSISAALGMAIARDRKGENHKCVAVIGDGALTGGMALEAINHAGHLPNTPLVVV 177 Query: 215 IENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + +N ++ V R S F V ++ + + G DI + +V Sbjct: 178 LNDNDMSISPPVGALSSYLNKVRLSPPLQFLSDSVQESVKNIPLIGKDIPEELKNIKGSV 237 Query: 266 AYCRAHKGPIIIEMLTYRYRG 286 K + E L + Y G Sbjct: 238 RRLAVPKVGAVFEELGFTYMG 258 >gi|89256407|ref|YP_513769.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. holarctica LVS] gi|115314849|ref|YP_763572.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. holarctica OSU18] gi|156502498|ref|YP_001428563.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010429|ref|ZP_02275360.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. holarctica FSC200] gi|254367743|ref|ZP_04983764.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella tularensis subsp. holarctica 257] gi|290953830|ref|ZP_06558451.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. holarctica URFT1] gi|295312841|ref|ZP_06803573.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. holarctica URFT1] gi|118595582|sp|Q2A3D3|DXS_FRATH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|122325136|sp|Q0BLU9|DXS_FRATO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|166198616|sp|A7NCA4|DXS_FRATF RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|89144238|emb|CAJ79511.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella tularensis subsp. holarctica LVS] gi|115129748|gb|ABI82935.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. holarctica OSU18] gi|134253554|gb|EBA52648.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella tularensis subsp. holarctica 257] gi|156253101|gb|ABU61607.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 615 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 60/220 (27%) Query: 129 LTGRQGG-ISKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ ++ K G + F + + F GH +S G+A A++ + Sbjct: 84 LTGRKDKLVTIKKDGGISGFPKRSESEYDTFGVGHS--STSISAALGMAIADRLQGKSSN 141 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK----- 237 V GDGA G +E+ N A +++ ++ +N+ ++ +V SA +FSK Sbjct: 142 TVAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSA--HFSKIISGG 199 Query: 238 ---------RGVSFNIP--------------GM----------------QVDGMDIRAVK 258 + V NIP GM +DG D+ Sbjct: 200 FYNSIREKGKEVLKNIPPIFEFVKKIETQTKGMFVPANFFEDLGFYYVGPIDGHDV---- 255 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYR 296 + K + + HKGP ++ ++T + +G++ SDP + Sbjct: 256 TELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFH 295 >gi|27377279|ref|NP_768808.1| transketolase subunit alpha protein [Bradyrhizobium japonicum USDA 110] gi|27350422|dbj|BAC47433.1| blr2168 [Bradyrhizobium japonicum USDA 110] Length = 283 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 3/117 (2%) Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMG 223 + G+ K ++S F DG ++G V+E+ A + L N+I +++ NNQ A G Sbjct: 131 IAVGMGLGLKRKKSGARVYTLFSDGELDEGSVWEAIQSAGHYKLDNLIGIVDVNNQQADG 190 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 S ++ A ++ +F +V+G D+ AV A D A ++ I+ + L Sbjct: 191 PS-TQVMAFEPLVEKLQAFGWFVQRVNGNDLNAVVAAFDAAKSHPELKPRIIVADTL 246 >gi|295425052|ref|ZP_06817758.1| 1-deoxy-D-xylulose 5-phosphate synthase [Lactobacillus amylolyticus DSM 11664] gi|295065249|gb|EFG56151.1| 1-deoxy-D-xylulose 5-phosphate synthase [Lactobacillus amylolyticus DSM 11664] Length = 579 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 34/69 (49%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G +SL TG+A A + + GDG+ G YE N AA+ N++ V+ + Sbjct: 119 GHTSTSISLATGMAKARDLMGKHENIMALIGDGSMTGGMAYEGLNNAAIEKHNLVVVVND 178 Query: 218 NQYAMGTSV 226 NQ ++ +V Sbjct: 179 NQMSIDKNV 187 >gi|284048215|ref|YP_003398554.1| deoxyxylulose-5-phosphate synthase [Acidaminococcus fermentans DSM 20731] gi|283952436|gb|ADB47239.1| deoxyxylulose-5-phosphate synthase [Acidaminococcus fermentans DSM 20731] Length = 627 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 69/189 (36%), Gaps = 57/189 (30%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S GIA A D + GDGA G+ E N A + +I V+ Sbjct: 112 GTGHSSTSISAALGIACARDLAGDDYNVIAVIGDGALTGGEAMEGLNNAGDLHKKLIVVL 171 Query: 216 ENNQY-------------------------------------AMGTSVSRASAQTNFSKR 238 +N+ ++G+SV+RA + S + Sbjct: 172 NDNEMSISKNVGALSSYLTELRTDPTYSRVKTEVEGFLKSLPSIGSSVARAVGRLKDSFK 231 Query: 239 GVSFNIPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 F +PGM VDG D+ A+ T +KA + P+ I +LT + +G+ Sbjct: 232 --YFFVPGMLFEDFGFKYLGPVDGHDLPALMETFEKA----KQLDEPVFIHVLTTKGKGY 285 Query: 288 SMSDPANYR 296 PA R Sbjct: 286 K---PAEER 291 >gi|329769512|ref|ZP_08260922.1| hypothetical protein HMPREF0433_00686 [Gemella sanguinis M325] gi|328838727|gb|EGF88325.1| hypothetical protein HMPREF0433_00686 [Gemella sanguinis M325] Length = 585 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 8/100 (8%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGRQ + K G + S + F GH +SL +GI A ++ Sbjct: 80 LTGRQKAFTDPKHYDDVSGYTNPKESEHDLFTIGH--TSTSLSLASGILHARDLKKEKGN 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V GDG+ + G YE N A N I +I +N ++ Sbjct: 138 VVAIIGDGSLSGGMAYEGLNTIATLGTNAIIIINDNDQSI 177 >gi|316978402|gb|EFV61392.1| putative transketolase, thiamine diphosphate binding domain protein [Trichinella spiralis] Length = 757 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 15/170 (8%) Query: 103 DQMITAYREHGHIL-ACGVDASKIM-AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D+ I + G IL AC V+A I +EL + S +G S + G + Sbjct: 134 DRFILSKGHAGPILYACWVEAGLIPESELLNLRKIDSDLEGHPTPRLSFVDV---ATGSL 190 Query: 161 GAQVSLGTGIAFANKYRRSDKI-----CVVCFGDGAANQGQVYESFNIAALWNL-NVIYV 214 G +S G+A+ K+ DKI CV+ GDG + +G V+E+ + A ++ L N++ + Sbjct: 191 GQGLSCAAGMAYVMKFM--DKIDSRVYCVL--GDGESAEGSVWEALHFAGMYELDNLVAI 246 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 + N+ S + +R +F VDG D+ A+ + A Sbjct: 247 FDINRLGQSQPASLGHRIDVYQQRFEAFGWNVECVDGHDVEALCRSFSSA 296 >gi|312898292|ref|ZP_07757682.1| transketolase, thiamine diphosphate binding domain protein [Megasphaera micronuciformis F0359] gi|310620211|gb|EFQ03781.1| transketolase, thiamine diphosphate binding domain protein [Megasphaera micronuciformis F0359] Length = 272 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 70/133 (52%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSD-KICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S+ G+A A K ++ ++ VC GDG +GQ++E+ A+ + L N+ I Sbjct: 115 GSLGQGLSVANGMALAAKTDGAEWRVYAVC-GDGEIQEGQIWEAAMSASHYKLDNLTLFI 173 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ++N+ + + S + +++ +F +++DG ++ A+++ + +A K P Sbjct: 174 DHNKLQIDGANSEVMSVMPIAEKFRAFGWNVIEIDGHNMDAIRSAL--TIAKTTVGK-PT 230 Query: 276 IIEMLTYRYRGHS 288 +I T + +G S Sbjct: 231 VIVAETVKGKGVS 243 >gi|295096800|emb|CBK85890.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 620 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 18/109 (16%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFA----NKYR 177 LTGR+ G + KGG +H F S + GH +S G GIA A NK R Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKENKQR 144 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 R+ +CV+ GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RT--VCVI--GDGAITAGMAFEAMNHAGDIKPDMLVILNDNEMSISENV 189 >gi|241663624|ref|YP_002981984.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia pickettii 12D] gi|240865651|gb|ACS63312.1| deoxyxylulose-5-phosphate synthase [Ralstonia pickettii 12D] Length = 636 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 38/185 (20%), Positives = 70/185 (37%), Gaps = 47/185 (25%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAM 222 +S G+A K D++ + GDGA + G +E+ N A ++ +L ++ V+ +N ++ Sbjct: 122 ISAALGMALGAKTNGEDRVAIAVIGDGAMSAGMAFEAMNNAGVYKDLPLVVVLNDNDMSI 181 Query: 223 GTSV---------------------------SRASAQTNFSKR----------------G 239 V S A F+KR Sbjct: 182 SPPVGALNRYLARLMSGQFYAATKKGVEKLLSVAPPVLEFAKRFEEHTKGMFVPATMFEE 241 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYRT 297 FN G +DG D+ ++ T+ R GP + ++T + +G+ + +DP Y Sbjct: 242 FGFNYIG-PIDGHDLESLVPTLQNIRQRAREGGGPQFLHVVTKKGQGYKLAEADPILYHG 300 Query: 298 REEIN 302 + N Sbjct: 301 PGKFN 305 >gi|154248651|ref|YP_001419609.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthobacter autotrophicus Py2] gi|229836094|sp|A7IPK6|DXS_XANP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|154162736|gb|ABS69952.1| deoxyxylulose-5-phosphate synthase [Xanthobacter autotrophicus Py2] Length = 643 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 22/173 (12%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +GG + F+ + + F H +S G G+A A ++ Sbjct: 86 LTGRRDRIRTLRQGGGLSGFTRRAESEYDPFGAAHS--STSISAGLGMAVARDLSGEERN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY-------AMGTSVSRA-SAQTN 234 V GDGA + G YE+ N A + +I ++ +N AM ++R S QT Sbjct: 144 VVCVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAPPTGAMSAYLARLISGQTY 203 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH-KGPIIIEMLTYRYRG 286 S R + G Q+ G + V+ +A + R G + E L + Y G Sbjct: 204 RSLREI-----GKQIAGHLPKFVERGAARAEEFARGFWTGGTLFEELGFYYVG 251 >gi|321225150|gb|EFX50211.1| 1-deoxy-D-xylulose 5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 326 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|302343357|ref|YP_003807886.1| deoxyxylulose-5-phosphate synthase [Desulfarculus baarsii DSM 2075] gi|301639970|gb|ADK85292.1| deoxyxylulose-5-phosphate synthase [Desulfarculus baarsii DSM 2075] Length = 635 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 5/94 (5%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G+A + R + + GDG+ G YE N A Sbjct: 114 SAYDAFDTGHS--STSISAALGMAVGKRLRGASGKVLAVIGDGSLTGGMAYEGLNQAGFL 171 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 N ++I V+ +N ++ +V A + F R +S Sbjct: 172 NEDLIVVLNDNGMSIAPNV---GALSKFVSRSLS 202 >gi|224141855|ref|XP_002324277.1| predicted protein [Populus trichocarpa] gi|222865711|gb|EEF02842.1| predicted protein [Populus trichocarpa] Length = 612 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 16/109 (14%) Query: 136 ISKGKGGSMHMFSTKNGFYG--------------GHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH K+G G GHG +S G G+A A + + Sbjct: 48 ILTGRRSLMHTLRQKDGLSGFTSRSESEYDPFGAGHGC--NSISAGLGMAVARDIKGKRE 105 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 V G+G GQVYE+ A + N+I ++ ++++++ + S Sbjct: 106 HIVTVIGNGTTMAGQVYEAMGNAGYLDSNMIVILNDSRHSLHPKIEEGS 154 >gi|46361691|gb|AAS89341.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ginkgo biloba] Length = 717 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A + + + GDGA GQ YE+ N A Sbjct: 174 SEYDSFGAGHS--STSISAGLGMAVGRDLKGRNNHVISVIGDGAMTAGQAYEAMNNAGYL 231 Query: 208 NLNVIYVIENNQ 219 + N+I ++ +N+ Sbjct: 232 DSNMIVILNDNK 243 >gi|56552130|ref|YP_162969.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp. mobilis ZM4] gi|260752342|ref|YP_003225235.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|81354958|sp|Q5NN52|DXS1_ZYMMO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName: Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP synthase 1; Short=DXPS 1 gi|56543704|gb|AAV89858.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp. mobilis ZM4] gi|258551705|gb|ACV74651.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 649 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 32/68 (47%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G A A+K SD V GDG+ G YE+ N A +I ++ +N+ ++ Sbjct: 126 ISAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDNEMSIS 185 Query: 224 TSVSRASA 231 V S+ Sbjct: 186 PPVGALSS 193 >gi|330999938|ref|ZP_08323636.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Parasutterella excrementihominis YIT 11859] gi|329573345|gb|EGG54957.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Parasutterella excrementihominis YIT 11859] Length = 976 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 10/136 (7%) Query: 166 LGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 + G A + RR D + V+ GD A A QG V E+ N+A ++++ Sbjct: 360 VAVGSVRARQDRRHDPKGRRVMGVLVHGDAAFAGQGVVMETLNLADTRGYGTGGTMHIVI 419 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 NNQ TS R + P + V+G D AV A+ + ++ + Sbjct: 420 NNQIGFTTSDPRDKGSMTYCTDPAKLIEAPVLHVNGDDPEAVVFATRLAMEFRKSFSRDV 479 Query: 276 IIEMLTYRYRGHSMSD 291 +++++ +R GH+ D Sbjct: 480 VVDIVCFRRLGHNEQD 495 >gi|291530331|emb|CBK95916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Eubacterium siraeum 70/3] Length = 585 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 28/182 (15%) Query: 129 LTGRQGGI------SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G G S S + F GH VSL G+A A + Sbjct: 80 LTGRKDGFLYEEHFDDISGYSNPAESEHDFFVIGH--TSTSVSLALGLAKARDLKHESGN 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS------------VSRAS 230 + GDG+ + G+ E+ + A ++ N+I +I +N ++ + Sbjct: 138 VIAVIGDGSLSGGEALEAIDYAGEFDGNLIIIINDNDMSIAENHGGMYKNLKALRDGNGK 197 Query: 231 AQTN-FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 A TN F+ G+ + DG DI ++ A K + K P+ + ++T + +G S Sbjct: 198 ADTNLFTAMGLDYVFVK---DGNDIESLIAAFSK----VKDSKRPVAVHIVTEKGKGLSF 250 Query: 290 SD 291 ++ Sbjct: 251 AE 252 >gi|270263553|ref|ZP_06191822.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia odorifera 4Rx13] gi|270042437|gb|EFA15532.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia odorifera 4Rx13] Length = 621 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 58/218 (26%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ IS + K G +H F S + GH LG +A + + Sbjct: 88 LTGRRDRISTIRQKDG-LHPFPWRAESEYDVLSVGHSSTSISAGLGMAVAAEREGKNRRT 146 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA------------ 229 +CV+ GDGA G +E+ N A N +++ V+ +N+ ++ +V Sbjct: 147 VCVI--GDGAITAGMAFEAMNHAGDINPDMLVVLNDNEMSISENVGALNNHLAQLLSGKL 204 Query: 230 -SAQTNFSKRGVS------------------FNIPGM-----------QVDGMDIRAVKA 259 S KR +S +PG VDG D++ + A Sbjct: 205 YSTLREGGKRVLSGLPPIKELVKRTEEHLKGMVVPGTLFEELGFNYIGPVDGHDVQGLVA 264 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 T+ R KGP ++ ++T + RG++ + DP ++ Sbjct: 265 TLKN----MRDLKGPQLLHIMTKKGRGYAPAEKDPISF 298 >gi|213613221|ref|ZP_03371047.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 292 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|167766572|ref|ZP_02438625.1| hypothetical protein CLOSS21_01078 [Clostridium sp. SS2/1] gi|167711695|gb|EDS22274.1| hypothetical protein CLOSS21_01078 [Clostridium sp. SS2/1] Length = 623 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 11/115 (9%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G + G S + F+ GH + +LG + A +D+ Sbjct: 79 LTGRKNGFENLRQFHGMSGFPKRKESDCDAFHSGHSSMSLSAALG--MVTARDINHTDET 136 Query: 183 CVVCFGDGAANQGQVYESFNIAALW---NLNVIYVIENNQYAMGTSVSRASAQTN 234 V GDGA + G YE+ N A N+I ++ +N+ ++ +V SA N Sbjct: 137 IVAVIGDGALSGGMAYEALNNMARLRKEKKNLIIILNDNKMSIAENVGGMSAYLN 191 >gi|158321289|ref|YP_001513796.1| transketolase domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158141488|gb|ABW19800.1| Transketolase domain protein [Alkaliphilus oremlandii OhILAs] Length = 274 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 5/140 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S GIA A K D GDG +G V+E+ +AA + L N+ +I+ Sbjct: 117 GSLGQGFSASCGIAMAGKIDHKDYRVYTLLGDGELQEGLVWEAAMLAAHYKLDNLTAIID 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + S + +F + +DG I A+ + KA A P + Sbjct: 177 YNGLQIDGRNEEILSVNPVSDKFKAFGWNVIAIDGHSIEAIIEAIGKA---KEAKNVPTL 233 Query: 277 IEMLTYRYRGHS-MSDPANY 295 I T + +G S M D ++ Sbjct: 234 ILAKTVKGKGVSFMEDQVDW 253 >gi|48477763|ref|YP_023469.1| transketolase subunit A [Picrophilus torridus DSM 9790] gi|48430411|gb|AAT43276.1| transketolase subunit A [Picrophilus torridus DSM 9790] Length = 302 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 4/132 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G A A+K R GDG +G +ES A + L N+I +++ Sbjct: 145 GSLGQGLGVAVGFAIASKMDRIKNHVYAILGDGEMEEGSTWESVMAAYKFGLNNLIAILD 204 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + + K+ SF +DG D ++A ++ A + + P Sbjct: 205 RNRIQLDGFTEDIMPLNDIGKKVRSFGWHVYDIDGHDFNEIEAAIEDA---KQNNDAPSF 261 Query: 277 IEMLTYRYRGHS 288 I T + RG S Sbjct: 262 IVAHTVKGRGVS 273 >gi|313896941|ref|ZP_07830488.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sp. oral taxon 137 str. F0430] gi|312974388|gb|EFR39856.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sp. oral taxon 137 str. F0430] Length = 587 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 8/100 (8%) Query: 129 LTGRQGG-ISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR G I++ + G + F S + F GH VSL TG+A A + Sbjct: 80 LTGRAGAYINEAEYGDVSGFTNTDESVHDIFNIGH--TSTAVSLATGLAKARDLAGRTEN 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + GDG+ + G+ E N+A + N+I V +N +++ Sbjct: 138 IIAVVGDGSMSGGEALEGLNVAGEMHSNLIIVFNDNDWSI 177 >gi|89073139|ref|ZP_01159678.1| 1-deoxy-D-xylulose-5-phosphate synthase [Photobacterium sp. SKA34] gi|89051092|gb|EAR56549.1| 1-deoxy-D-xylulose-5-phosphate synthase [Photobacterium sp. SKA34] Length = 621 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 51/220 (23%), Positives = 86/220 (39%), Gaps = 60/220 (27%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ ++ + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDDMATIRQKGG-LHPFPWRGESEYDTLSVGHS--STSISAGLGIAIAAEKEGLNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV--------------- 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 145 KVVSIIGDGAITAGMAFEAMNHAGDVHSDMLVILNDNEMSISENVGALNNHLAHLLSGNF 204 Query: 227 ------------SRASAQTNFSKRG----------------VSFNIPGMQVDGMDIRAVK 258 S A KR + FN G VDG D+ + Sbjct: 205 YTSIREGGKKVLSNAPPIKEMVKRAEEHIKGMVVPSTMFEELGFNYIG-PVDGHDVHELV 263 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYR 296 T+ R KGP + ++T + +G++ +DP NY Sbjct: 264 KTLKN----MRNLKGPQFLHIMTKKGKGYAPAEADPINYH 299 >gi|317498983|ref|ZP_07957265.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893732|gb|EFV15932.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium 5_1_63FAA] Length = 623 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 11/115 (9%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G + G S + F+ GH + +LG + A +D+ Sbjct: 79 LTGRKNGFENLRQFHGMSGFPKRKESDCDAFHSGHSSMSLSAALG--MVTARDINHTDET 136 Query: 183 CVVCFGDGAANQGQVYESFNIAALW---NLNVIYVIENNQYAMGTSVSRASAQTN 234 V GDGA + G YE+ N A N+I ++ +N+ ++ +V SA N Sbjct: 137 IVAVIGDGALSGGMAYEALNNMARLRKEKKNLIIILNDNKMSIAENVGGMSAYLN 191 >gi|303257035|ref|ZP_07343049.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Burkholderiales bacterium 1_1_47] gi|302860526|gb|EFL83603.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Burkholderiales bacterium 1_1_47] Length = 952 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 10/136 (7%) Query: 166 LGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIE 216 + G A + RR D + V+ GD A A QG V E+ N+A ++++ Sbjct: 336 VAVGSVRARQDRRHDPKGRRVMGVLVHGDAAFAGQGVVMETLNLADTRGYGTGGTMHIVI 395 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 NNQ TS R + P + V+G D AV A+ + ++ + Sbjct: 396 NNQIGFTTSDPRDKGSMTYCTDPAKLIEAPVLHVNGDDPEAVVFATRLAMEFRKSFSRDV 455 Query: 276 IIEMLTYRYRGHSMSD 291 +++++ +R GH+ D Sbjct: 456 VVDIVCFRRLGHNEQD 471 >gi|269958941|ref|YP_003328730.1| alpha-ketoglutarate decarboxylase [Anaplasma centrale str. Israel] gi|269848772|gb|ACZ49416.1| alpha-ketoglutarate decarboxylase [Anaplasma centrale str. Israel] Length = 921 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 8/121 (6%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQ 232 +R + ++ G+ A QG V E F ++ + + +++V+ NNQ +G + S+ Sbjct: 332 KRQPVLGILVHGNAAFIGQGVVSEGFTLSGVAGYSPGGIVHVVVNNQ--VGFTADPESSM 389 Query: 233 TNFSKRGVS--FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 T+F V+ + P V+G D +V D A+ Y ++++++ YR GH+ Sbjct: 390 TSFYCSDVAKMIDAPVFHVNGDDPESVLLVADLAMEYRSKFGKDVVVDIVCYRRFGHNEG 449 Query: 291 D 291 D Sbjct: 450 D 450 >gi|294102444|ref|YP_003554302.1| Transketolase domain protein [Aminobacterium colombiense DSM 12261] gi|293617424|gb|ADE57578.1| Transketolase domain protein [Aminobacterium colombiense DSM 12261] Length = 279 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 6/127 (4%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G +G + + GIA + R S GDG +G ++ES AA + L N Sbjct: 115 GIDASSGSLGMGLGVANGIALGLRLRGSQSRVFCLAGDGELQEGAIWESAMSAAHYQLDN 174 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 +I +I+ N+ M V + + + + +F + DG D +++D A++ C Sbjct: 175 LIMIIDRNEVQMEGIVEKILSIEPLNAKFQAFGWHVVCADGHDF----SSLDYALS-CGV 229 Query: 271 HKGPIII 277 P++I Sbjct: 230 PGKPLVI 236 >gi|225574184|ref|ZP_03782794.1| hypothetical protein RUMHYD_02248 [Blautia hydrogenotrophica DSM 10507] gi|225038552|gb|EEG48798.1| hypothetical protein RUMHYD_02248 [Blautia hydrogenotrophica DSM 10507] Length = 279 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 14/172 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K GDG +G V+E A+ + L N+ V++ Sbjct: 115 GSLGHGLPVCVGMALAGKMNGQSYRVYTVMGDGELAEGSVWEGTMAASHYKLDNLCAVVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 N+ + + A + +R SF + V DG DI + ++A + KG P Sbjct: 175 RNRLQISGNTEDVMAHDDLHERFSSFGWHVIDVKDGNDIDQLHEAFEEA----KTVKGKP 230 Query: 275 IIIEMLTYRYRGHS-MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 ++ T + +G S M + AN+ + + + + Q+RK L K A+ Sbjct: 231 TVLIANTVKGKGSSVMENKANWHHK------VPSEEELAQIRKDLADRKEAA 276 >gi|183598176|ref|ZP_02959669.1| hypothetical protein PROSTU_01555 [Providencia stuartii ATCC 25827] gi|188020343|gb|EDU58383.1| hypothetical protein PROSTU_01555 [Providencia stuartii ATCC 25827] Length = 935 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 5/118 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+ N++ V + ++ NNQ TS + + T + + Sbjct: 352 LPITIHGDSAVAGQGVVQETLNMSQARGYEVGGTVRIVINNQIGFTTSNPKDTRSTEYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 P V+ D AV A+ + K ++I+++ YR GH+ +D N Sbjct: 412 DIAKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEADEPN 469 >gi|154315495|ref|XP_001557070.1| hypothetical protein BC1G_04320 [Botryotinia fuckeliana B05.10] gi|150847260|gb|EDN22453.1| hypothetical protein BC1G_04320 [Botryotinia fuckeliana B05.10] Length = 123 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 7/87 (8%) Query: 280 LTYRYRGHSMSDPA-NYRTREEINEMRSNHDPIEQVRKRL-LHNKWASEGDLKEIE--MN 335 ++YR HS SD + YR R E+ + + +PI ++RK L N W + KEIE N Sbjct: 1 MSYRISHHSTSDDSFAYRARVEVEDWKRRDNPITRLRKYLEKRNVW---NEAKEIEARTN 57 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDI 362 ++K + + A+ +K+P ++ D+ Sbjct: 58 IKKEVLKKLSEAEKEKKPPIKSMFEDV 84 >gi|78357243|ref|YP_388692.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219648|gb|ABB38997.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 661 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 50/221 (22%), Positives = 80/221 (36%), Gaps = 60/221 (27%) Query: 129 LTGRQGGIS-----KGKGGSMHMFSTKNGFYG-GHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ S +G G M + +G GH +S G+A A D Sbjct: 112 LTGRRDEFSTLRQYQGISGFPKMAESPYDHFGVGHS--STSISAAAGMAMARDLAGDDND 169 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS--AQTNFSKRGV 240 + GDG+ G +E N A ++ ++ +N+ ++ +V S N S R V Sbjct: 170 VIAIIGDGSMTAGLAFEGLNQAGHQGRRLLVILNDNEMSISKNVGALSLFLSRNLSSRWV 229 Query: 241 ---------------------------------SFNIPGM-----------QVDGMDIRA 256 SF PGM VDG D+R Sbjct: 230 RRMKRDVETWLKSVPGIGEEMLNYAKRSEHSLKSFFTPGMLFEAFRFNYVGPVDGHDVRN 289 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGH--SMSDPANY 295 + M A RA P+++ +LT + +G+ + S+P + Sbjct: 290 LAKVMQMA----RALDEPVLLHVLTKKGKGYEPAESNPTYF 326 >gi|118580817|ref|YP_902067.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter propionicus DSM 2379] gi|118503527|gb|ABL00010.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter propionicus DSM 2379] Length = 626 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 9/93 (9%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAA 205 S + F GH +S TG+A A RR+ + V+ GDG+ G YE+ N A Sbjct: 106 SPHDAFEVGH--ASTSISAATGLAAARDLAGRRNKVLAVI--GDGSMTGGMAYEAMNHAG 161 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 N ++I ++ +N+ ++ +V A +NF R Sbjct: 162 HMNRDMIVILNDNEMSIAENV---GALSNFLTR 191 >gi|312796200|ref|YP_004029122.1| 2-oxoglutarate dehydrogenase E1 component [Burkholderia rhizoxinica HKI 454] gi|312167975|emb|CBW74978.1| 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) [Burkholderia rhizoxinica HKI 454] Length = 815 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 11/136 (8%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A RR D + V GD A A QG V E+ N+A ++++ NNQ Sbjct: 200 GSAKARMDRRGDLNGQQVLPVQIHGDAAFAGQGVVMETLNLAQTRGYGTHGTLHIVINNQ 259 Query: 220 YAMGTSVSRASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R + T + V P + V+G D AV A+ + ++I+ Sbjct: 260 IGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNGDDPEAVVFATQLAIDFRMQFHKDVVID 319 Query: 279 MLTYRYRGHSMSD-PA 293 ++ +R GH+ D PA Sbjct: 320 IVCFRKLGHNEQDTPA 335 >gi|303274126|ref|XP_003056386.1| predicted protein [Micromonas pusilla CCMP1545] gi|226462470|gb|EEH59762.1| predicted protein [Micromonas pusilla CCMP1545] Length = 739 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 30/64 (46%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G G+A A + + GDGA G YE+ N A + N+I ++ Sbjct: 187 GAGHSSTSISAGLGMAVARDMQGRSNHVIAVIGDGAITGGMAYEAMNNAGYLDTNMIIIL 246 Query: 216 ENNQ 219 +NQ Sbjct: 247 NDNQ 250 >gi|123441174|ref|YP_001005161.1| putative N-terminal region of transketolase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088135|emb|CAL10923.1| putative N-terminal region of transketolase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 276 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K S + V GDG +G +E+ +AA + L N+I + + Sbjct: 121 GALGHGLPVAVGIALAAKRANSKRRVFVLTGDGELAEGSNWEAALVAAHYQLDNLIIIND 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N+ + + + + +F + + G D+++V T++ Sbjct: 181 KNKLQLAGTTKSIMNTDPLADKWQAFGLQVTECQGNDMQSVVGTLE 226 >gi|320529516|ref|ZP_08030601.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas artemidis F0399] gi|320138227|gb|EFW30124.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas artemidis F0399] Length = 596 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 8/100 (8%) Query: 129 LTGRQGG-ISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR G I++ + G + F S + F GH VSL TG+A A + Sbjct: 80 LTGRAGAYINEAQYGDVSGFTNTDESAHDIFNIGH--TSTAVSLATGLAKARDLAGRTEN 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + GDG+ + G+ E N+A + N+I V +N +++ Sbjct: 138 IIAVVGDGSMSGGEALEGLNVAGEMHSNLIIVFNDNDWSI 177 >gi|270313093|gb|ACZ73628.1| pyruvate dehydrogenase E1 component alpha subunit [Triticum aestivum] gi|281333051|gb|ADA60980.1| pyruvate dehydrogenase E1 component alpha subunit [Triticum aestivum] gi|281333053|gb|ADA60981.1| pyruvate dehydrogenase E1 component alpha subunit [Triticum aestivum] gi|281333055|gb|ADA60982.1| pyruvate dehydrogenase E1 component alpha subunit [Aegilops tauschii] gi|281333059|gb|ADA60984.1| pyruvate dehydrogenase E1 component alpha subunit [Aegilops ventricosa] gi|281333061|gb|ADA60985.1| pyruvate dehydrogenase E1 component alpha subunit [Secale strictum subsp. africanum] gi|281333063|gb|ADA60986.1| pyruvate dehydrogenase E1 component alpha subunit [Dasypyrum villosum] gi|281333065|gb|ADA60987.1| pyruvate dehydrogenase E1 component alpha subunit [Lophopyrum elongatum] gi|281333067|gb|ADA60988.1| pyruvate dehydrogenase E1 component alpha subunit [Hordeum vulgare] gi|281333071|gb|ADA60990.1| pyruvate dehydrogenase E1 component alpha subunit [Thinopyrum intermedium] gi|281333075|gb|ADA60992.1| pyruvate dehydrogenase E1 component alpha subunit [Dasypyrum breviaristatum] gi|281333077|gb|ADA60993.1| pyruvate dehydrogenase E1 component alpha subunit [Secale sylvestre] gi|281333079|gb|ADA60994.1| pyruvate dehydrogenase E1 component alpha subunit [Secale strictum] gi|308549789|gb|ADO34209.1| alpha subunit pyruvate dehydrogenase E1 component [Secale cereale] gi|308549791|gb|ADO34210.1| alpha subunit pyruvate dehydrogenase E1 component [Secale cereale] gi|308549793|gb|ADO34211.1| alpha subunit pyruvate dehydrogenase E1 component [Secale vavilovii] gi|308549795|gb|ADO34212.1| alpha subunit pyruvate dehydrogenase E1 component [Secale cereale] Length = 38 Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 21/29 (72%) Query: 272 KGPIIIEMLTYRYRGHSMSDPANYRTREE 300 +GP ++E TYR+RGHS++DP R +E Sbjct: 3 EGPTLVECETYRFRGHSLADPDELRRPDE 31 >gi|83593951|ref|YP_427703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC 11170] gi|118595487|sp|Q2RR29|DXS2_RHORT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName: Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP synthase 2; Short=DXPS 2 gi|83576865|gb|ABC23416.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC 11170] Length = 645 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 13/169 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +GG + F+ + + F GH +S G G+A + + Sbjct: 87 LTGRRDRIRTLRQGGGLSGFTLREESPYDPFGAGHS--STSISAGLGMAIGSALAGDARD 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN---FSKRG 239 V GDG+ + G YE+ N A +I ++ +N ++ V SA + SK Sbjct: 145 VVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDNDMSIAPPVGAMSAYLSRLLSSKSW 204 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRA--HKGPIIIEMLTYRYRG 286 +S ++ A++ T +A Y R G + E + + Y G Sbjct: 205 LSIRTLAKEIVARLPDALERTAKRAEEYARGMVTGGGTLFEEMGFYYVG 253 >gi|318041518|ref|ZP_07973474.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. CB0101] Length = 635 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 13/109 (11%) Query: 139 GKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 G+ H K+G G G G +S G+A A R D CV Sbjct: 82 GRYNQFHTLRQKDGVAGYLKRCESSFDHFGAGHASTSISAALGMALARDQRGEDFKCVAV 141 Query: 187 FGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVSRASAQTN 234 GDG+ G E+ N A L ++ V+ +N ++ V S N Sbjct: 142 IGDGSLTGGMALEAINHAGHLPKTRLLVVLNDNDMSISPPVGALSTHLN 190 >gi|313887019|ref|ZP_07820719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Porphyromonas asaccharolytica PR426713P-I] gi|312923545|gb|EFR34354.1| 1-deoxy-D-xylulose-5-phosphate synthase [Porphyromonas asaccharolytica PR426713P-I] Length = 633 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 17/196 (8%) Query: 35 DIPFLEGFEVSEFNKEQELSAY-RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 D P L + ++ LS L +RR+E L + V G +G + V Sbjct: 5 DYPILSQIDTPHQLRQLPLSQLSELCRELRRYE-----LEVLSHVPGHLGSSLGAVELTV 59 Query: 94 GMK-MSLTEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK 150 + + T D+++ ++ +GH + G + E+ + GG+S G + S Sbjct: 60 ALHYVCRTPYDRIVWDVGHQAYGHKILTG---RRDRFEMLRQWGGLS---GFPLPSESEY 113 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 + F GH +S G+A A K ++ ++ V GDG+ G +E N A+ + + Sbjct: 114 DTFPAGHA--SNSISAALGMAIAAKLKQEERHVVAVIGDGSMTGGLAFEGLNNASSYPND 171 Query: 211 VIYVIENNQYAMGTSV 226 ++ V+ +N ++ +V Sbjct: 172 LLVVVNDNNMSIDANV 187 >gi|225466412|ref|XP_002279744.1| PREDICTED: hypothetical protein, partial [Vitis vinifera] Length = 429 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH +G G G G +S G G+A Sbjct: 6 ILTGRRSRMHTIRKTSGLAGFPKREESVHDAFGVGHSSTSISAGLGMAVGRDLLGKTNSV 65 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + N+I ++ +N+ Sbjct: 66 VAVIGDGAMTAGQAYEAMNNAGYLDTNMIIILNDNK 101 >gi|313144657|ref|ZP_07806850.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter cinaedi CCUG 18818] gi|313129688|gb|EFR47305.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter cinaedi CCUG 18818] Length = 631 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 74/186 (39%), Gaps = 48/186 (25%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +SLG G A A + ++ + V+ GDG+ + G VYE+ N Sbjct: 118 SASDYFIAGHS--STSISLGVGAAKARALQNNEYMPVIMIGDGSMSAGLVYEALNELGDR 175 Query: 208 NLNVIYVIENNQYAMGTSVSRAS----------------------------AQTNFSKR- 238 ++ V+ +N+ ++ + S + T +KR Sbjct: 176 KYPMVIVLNDNEMSIAKPIGAISNYLSQILTTPLYQKTRHSIKKVLQKMPDSATYLAKRF 235 Query: 239 ---------GVSFNIPGMQ----VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 G+ F G+ +DG +I + T+ +A + K P+II T + + Sbjct: 236 EESLKLITPGILFEELGLDYVGPIDGHNIELIINTLQRA----KEMKKPVIIHAQTLKGK 291 Query: 286 GHSMSD 291 G+ +++ Sbjct: 292 GYEIAE 297 >gi|257093965|ref|YP_003167606.1| 2-oxoglutarate dehydrogenase E1 component [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046489|gb|ACV35677.1| 2-oxoglutarate dehydrogenase, E1 subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 946 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 10/134 (7%) Query: 168 TGIAFANKYRR----SDKI-CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENN 218 G ++ + RR DK+ V+ GD A A QG E N V ++++ NN Sbjct: 330 VGSVYSRQRRRGENGKDKVLAVLIHGDAAVAGQGVNQEMLNFGQTRGYGVGGTVHIVVNN 389 Query: 219 QYAMGTSVSRASAQTNFSKRGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 Q TS R + + P V+G D AV AV Y + K +++ Sbjct: 390 QIGFTTSDPRDYRSSLYCTDIFKMAEAPIFHVNGDDPEAVALVTSIAVEYRKTFKKDVVV 449 Query: 278 EMLTYRYRGHSMSD 291 +++ YR GH+ D Sbjct: 450 DIVCYRKLGHNEQD 463 >gi|225432422|ref|XP_002277919.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297736933|emb|CBI26134.3| unnamed protein product [Vitis vinifera] Length = 716 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH +G G G G +S G G+A + + Sbjct: 149 ILTGRRDQMHTMRQTDGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGKNNNV 208 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 209 IAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 244 >gi|14520661|ref|NP_126136.1| transketolase n-terminal section [Pyrococcus abyssi GE5] gi|5457877|emb|CAB49367.1| tkt1 transketolase N-terminal section [Pyrococcus abyssi GE5] Length = 220 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 9/102 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ GIA A + V GDG ++GQ++E+ A+ + L NVI +++ Sbjct: 98 GSLGQGLSVANGIAMAKRIDGKSGRVFVILGDGELDEGQIWEAAMTASHYGLDNVIAIVD 157 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 N + + R ++ + + +F G +R VK Sbjct: 158 RNYGQLSGNTERIMSKEPLADKWKAF--------GWKVREVK 191 >gi|269215855|ref|ZP_06159709.1| transketolase, N- subunit [Slackia exigua ATCC 700122] gi|269130805|gb|EEZ61881.1| transketolase, N- subunit [Slackia exigua ATCC 700122] Length = 284 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 6/144 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A S GDG +GQV+E+ AA L N++ +++ Sbjct: 125 GSLGQGLSIACGLACGLFLSGSASSVFALLGDGECQEGQVWEAAMFAAHRRLDNLVAIVD 184 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N+ + V+ + + SF DG D+ AV +D H G P Sbjct: 185 RNRLQIDGRVADVCDLDDLGDKFRSFGWQVFACDGNDMEAV---VDTLACAKETHSGKPK 241 Query: 276 IIEMLTYRYRGHS-MSDPANYRTR 298 +I T + +G S M + A + + Sbjct: 242 VIVAETTKGKGVSFMENQAGWHGK 265 >gi|213024230|ref|ZP_03338677.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 188 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 11/114 (9%) Query: 157 HGIVGAQVSLGTGIAFANKY-------RRSDKI-CVVCFGDGAANQGQVYESFNIAALWN 208 HG+ SLG GI+ A RR +++ C+V GDG N+GQ +E+F A Sbjct: 31 HGVDATTGSLGQGISIAGGMALSHKLARRPNRVFCIV--GDGELNEGQCWEAFQFIAHHR 88 Query: 209 LNVIYV-IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 LN + V I+ N+ + + + + +F + V G DI + A + Sbjct: 89 LNNLTVFIDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAVV 142 >gi|152969165|ref|YP_001334274.1| putative transketolase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150954014|gb|ABR76044.1| putative transketolase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 276 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K + + V GDG +G +E+ +AA + L N+I + + Sbjct: 121 GALGHGLPVAVGIALAAKRDNNPRRVFVVTGDGELAEGSNWEAALVAAHYQLDNLIIIND 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N + + ++ +F + Q +G D+ V AT++ Sbjct: 181 KNNLQLAGATKEIMNTDPLDEKWRAFGMEVTQCNGNDMAEVVATLE 226 >gi|50120878|ref|YP_050045.1| putative transketolase N-terminal section [Pectobacterium atrosepticum SCRI1043] gi|49611404|emb|CAG74852.1| putative transketolase N-terminal section [Pectobacterium atrosepticum SCRI1043] Length = 276 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K S + V GDG +G +E+ AA + L N+I + + Sbjct: 121 GALGHGLPVAVGIALAAKRDNSPRRVFVLTGDGELAEGSNWEAALAAAHYQLDNLIIIND 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N+ + + +++ +F + + G D+R+V T++ Sbjct: 181 KNKLQLAGTTCSIMNTDPLAEKWQAFGLQVTECAGNDMRSVVDTLE 226 >gi|225570202|ref|ZP_03779227.1| hypothetical protein CLOHYLEM_06298 [Clostridium hylemonae DSM 15053] gi|225160997|gb|EEG73616.1| hypothetical protein CLOHYLEM_06298 [Clostridium hylemonae DSM 15053] Length = 303 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 5/150 (3%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 G G +G S+ G+A A + + GDG G+V+E+ AA + L+ Sbjct: 115 GIEASTGALGQGFSMALGMALAGHMDKKEHRVFCVLGDGECQSGEVWEAAMAAAKYGLDQ 174 Query: 212 I-YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 VI+NN+ + + + +F G D++A++ + D R Sbjct: 175 FKVVIDNNRLQIDGFTDDIMPLGDLKAKWEAFGWHAEVCGGHDLQALRKSFDN---MDRV 231 Query: 271 HKGPIIIEMLTYRYRGHS-MSDPANYRTRE 299 P ++ T + +G S M + A++ +R+ Sbjct: 232 KGRPQVLIADTVKGKGVSFMENEADWHSRK 261 >gi|229816435|ref|ZP_04446736.1| hypothetical protein COLINT_03488 [Collinsella intestinalis DSM 13280] gi|229807977|gb|EEP43778.1| hypothetical protein COLINT_03488 [Collinsella intestinalis DSM 13280] Length = 290 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 7/135 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K+ GDG +GQV+E+ A L N+ +++ Sbjct: 132 GSLGQGISAAVGMALAAKHWGDAYRTYCLLGDGEIEEGQVWEAAMFAGNQQLDNLCLIVD 191 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 +N + S+ ++ + + +F +++ DG D+ V+A ++A R+ G P Sbjct: 192 HNGLQIDGSIEEVNSAMPIADKFAAFKFHVIELADGNDMAQVRAAFEEA----RSVTGKP 247 Query: 275 IIIEMLTYRYRGHSM 289 + I T + +G S Sbjct: 248 VCIVAETVKGKGVSF 262 >gi|328956193|ref|YP_004373526.1| transketolase subunit A [Coriobacterium glomerans PW2] gi|328456517|gb|AEB07711.1| transketolase subunit A [Coriobacterium glomerans PW2] Length = 282 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 6/122 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI-YVIE 216 G +G + +G G+A A + + V GDG +G ++E+ A+ + L+ + +++ Sbjct: 118 GSLGHGLPVGVGMALAARMDKRSYRTYVVMGDGELAEGSIWEAAMAASHFGLDSLCAIVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N+ + S AQ + +R +F + DG D+ ++D A A + KG P Sbjct: 178 RNRLQISGSTEDVMAQDSQQQRWGAFGWHVVTTDGNDL----FSLDAAFAEAASTKGVPT 233 Query: 276 II 277 +I Sbjct: 234 VI 235 >gi|319792407|ref|YP_004154047.1| deoxyxylulose-5-phosphate synthase [Variovorax paradoxus EPS] gi|315594870|gb|ADU35936.1| deoxyxylulose-5-phosphate synthase [Variovorax paradoxus EPS] Length = 618 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 32/63 (50%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G+A A K + D+ V GDGA G +E+ N A + + ++ ++ +N ++ Sbjct: 121 ISAALGMAMAAKQKGEDRYTVAIIGDGALTAGMAFEALNNAGVCDCKLLVILNDNDMSIS 180 Query: 224 TSV 226 V Sbjct: 181 PPV 183 >gi|255068751|emb|CBA12009.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nicotiana tabacum] Length = 717 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+G +S + G + S + F GH +S G G+A + + Sbjct: 151 LTGRRGKMSTLRQTDGLAGFTKRSESEYDCFGTGHS--STTISAGLGMAVGRDLKGKNNN 208 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 209 VIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNR 245 >gi|145589884|ref|YP_001156481.1| deoxyxylulose-5-phosphate synthase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048290|gb|ABP34917.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 633 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 53/246 (21%), Positives = 91/246 (36%), Gaps = 62/246 (25%) Query: 129 LTGRQGGIS-----KGKGGSMHMFSTK-NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ + KG G H ++ + F GH ++G AF K R ++ Sbjct: 80 LTGRRDQMHTLRQFKGLSGFPHRSESEFDAFGTGHSSTSISAAMGMARAFQTKGER--QV 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAMGTSV--------------- 226 V GD A G +E+ N A ++ +L ++ ++ +N ++ +V Sbjct: 138 AVAVIGDSAMTGGMAFEAMNNAGVYDDLPLVVILNDNDMSISPAVGALNRHLARLLSGNI 197 Query: 227 ------------SRASAQTNFSKR----------------GVSFNIPGMQVDGMDIRAVK 258 S A F+KR FN G +DG D+ A+ Sbjct: 198 YSATKKGIDSVLSIAPPLREFAKRLEDHAKGMVSPSTIFQEFGFNYFG-PIDGHDLDALI 256 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYRTREEINEMRSNHDPIEQVRK 316 + +GP + ++T + +G+ + +DP Y S DP + V+K Sbjct: 257 PMLQNVRRLALEGRGPQFLHVVTKKGQGYELAEADPVLYHG-------PSKFDPEQGVKK 309 Query: 317 RLLHNK 322 L K Sbjct: 310 SLTSKK 315 >gi|329962193|ref|ZP_08300200.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides fluxus YIT 12057] gi|328530480|gb|EGF57354.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides fluxus YIT 12057] Length = 586 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 22/157 (14%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH VSL +G+A D+ + GDG+ + G+ +E + AA Sbjct: 105 SEHDFFVIGH--TSTSVSLASGLAKGRDLTGGDENIIAVIGDGSLSGGEAFEGLDYAAEL 162 Query: 208 NLNVIYVIENNQYAMGTS------------VSRASAQTNFSKR-GVSFNIPGMQVDGMDI 254 N+I ++ +NQ ++ + S + NF K G+ + DG +I Sbjct: 163 GTNLIIIVNDNQMSIAENHGGLYRNLQELRESNGECECNFFKAMGLDYT---YVADGNNI 219 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 A+ A A + + + P+++ + T + +G+ ++ Sbjct: 220 EALVA----AFSTVKDIQHPVVVHINTVKGKGYKPAE 252 >gi|227894578|ref|ZP_04012383.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus ultunensis DSM 16047] gi|227863569|gb|EEJ70990.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus ultunensis DSM 16047] Length = 580 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 14/144 (9%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G ++L TG+A A + + GDG+ G YE N AA+ N++ Sbjct: 115 YYAVGHTSTSIALATGMAKARDLMGGHENIMALIGDGSMTGGLAYEGLNNAAIEKHNLVV 174 Query: 214 VIENNQYAMGTSVS------RASAQTNFSKRGVSFNIPGMQ----VDGMDIRAVKATMDK 263 V+ +NQ ++ +V + +N + F G DG DI+ +M Sbjct: 175 VVNDNQMSIDDNVGGLVTALKKLRDSNGETKENPFTAMGFDYRYVADGNDIK----SMID 230 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGH 287 A + PI++ + T + +G+ Sbjct: 231 AFKAVKDVDHPILLHINTLKGKGY 254 >gi|146310548|ref|YP_001175622.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacter sp. 638] gi|166920141|sp|A4W791|DXS_ENT38 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|145317424|gb|ABP59571.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacter sp. 638] Length = 620 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 18/109 (16%) Query: 129 LTGRQG--GISKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFA----NKYR 177 LTGR+ G + KGG +H F + + GH +S G GIA A NK R Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEFDVLSVGHS--STSISAGIGIAVAAEKENKQR 144 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 R+ +CV+ GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RT--VCVI--GDGAITAGMAFEAMNHAGDIKPDMLVILNDNEMSISENV 189 >gi|57640205|ref|YP_182683.1| transketolase, N-terminal section [Thermococcus kodakarensis KOD1] gi|57158529|dbj|BAD84459.1| transketolase, N-terminal section [Thermococcus kodakarensis KOD1] Length = 219 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 7/122 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S+ GIA A + + V GDG ++GQV+E+ A+ L+ VI +++ Sbjct: 97 GSLGQGLSVANGIAMAKRMDGEEGYVYVILGDGELDEGQVWEAAMTASHHRLDRVIAIVD 156 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + + ++ + + +F G +V G+ R K + KA+ + G P Sbjct: 157 RNYFQLTGGTEEILSKEPLADKWRAF---GWEVMGVPNR--KEELKKALETAKKLGGRPK 211 Query: 276 II 277 +I Sbjct: 212 VI 213 >gi|49473998|ref|YP_032040.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella quintana str. Toulouse] gi|81647185|sp|Q6G0D4|DXS_BARQU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|49239501|emb|CAF25854.1| 1-deoxyxylulose-5-phosphate synthase [Bartonella quintana str. Toulouse] Length = 640 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 13/113 (11%) Query: 129 LTGR---------QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR +GG+S G + S + F GH LG +A A K + Sbjct: 86 LTGRRDRIRTLRQEGGLS---GFTKRSESVYDPFGAGHSSTSISAGLGMTVASALKAEKR 142 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 I V GDGA + G YE+ N A + +I ++ +N ++ SA Sbjct: 143 RNIIAVI-GDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAH 194 >gi|197301782|ref|ZP_03166852.1| hypothetical protein RUMLAC_00508 [Ruminococcus lactaris ATCC 29176] gi|197299222|gb|EDY33752.1| hypothetical protein RUMLAC_00508 [Ruminococcus lactaris ATCC 29176] Length = 624 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 8/112 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G + K G M F + + F GH +S G G A + + Sbjct: 80 LTGRKAGFDELRKYGGMSGFPKRKESECDAFDTGHS--STSISAGLGYVAARELQGGSHS 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 V GDG+ G YE+ N A+ N I V+ +N ++ +V S N Sbjct: 138 VVSIIGDGSMTGGMAYEALNNASRLKSNFIIVLNDNNMSISENVGGMSQYLN 189 >gi|119593155|gb|EAW72749.1| transketolase-like 1, isoform CRA_a [Homo sapiens] Length = 491 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 94 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 153 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 154 DVNRLGHSGALPAEHCINIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 210 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 211 AVVAKTFKGRG 221 >gi|238798522|ref|ZP_04642000.1| Transketolase subunit A [Yersinia mollaretii ATCC 43969] gi|238717609|gb|EEQ09447.1| Transketolase subunit A [Yersinia mollaretii ATCC 43969] Length = 276 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K S + V GDG +G +E+ +AA + L N+I + + Sbjct: 121 GALGHGLPVAVGIALAAKRANSKRRVFVLTGDGELAEGSNWEAALVAAHYQLDNLIIIND 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N+ + S + + +F + + G D+++V T++ Sbjct: 181 KNKLQLAGSTKSIMNTDPLADKWQAFGLQVTECRGNDMQSVVETLE 226 >gi|224824507|ref|ZP_03697614.1| 2-oxoglutarate dehydrogenase, E1 subunit [Lutiella nitroferrum 2002] gi|224603000|gb|EEG09176.1| 2-oxoglutarate dehydrogenase, E1 subunit [Lutiella nitroferrum 2002] Length = 942 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 18/137 (13%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-----ANQGQVYESFNIAALWNLNV---IYVI 215 G A + RR D + V+ GD A NQG +FN++ I++I Sbjct: 333 GSVRARQDRRKDSARKQVVPVLIHGDSAFAGLGVNQG----TFNLSQTRGYGTGGTIHII 388 Query: 216 ENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 NNQ TS +R T + + P V+G D AV M A+ Y + Sbjct: 389 INNQVGFTTSDTRDMRSTLYCTDVAKMVEAPIFHVNGDDPEAVCYVMQAALDYRMTFQKD 448 Query: 275 IIIEMLTYRYRGHSMSD 291 ++I+++ YR GH+ D Sbjct: 449 VVIDLVCYRKLGHNEGD 465 >gi|224457199|ref|ZP_03665672.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. tularensis MA00-2987] gi|254874906|ref|ZP_05247616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. tularensis MA00-2987] gi|254840905|gb|EET19341.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis subsp. tularensis MA00-2987] Length = 609 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 87/223 (39%), Gaps = 66/223 (29%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS S + T F GH +S G+A A++ + Sbjct: 84 LTGRKDKLVTIKKDGGISGFPKRSESEYDT---FGVGHS--STSISAALGMAIADRLQGK 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK-- 237 V GDGA G +E+ N A +++ ++ +N+ ++ +V SA +FSK Sbjct: 139 SSNTVAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSA--HFSKII 196 Query: 238 ------------RGVSFNIP--------------GM----------------QVDGMDIR 255 + V NIP GM +DG D+ Sbjct: 197 SGGFYNSIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDV- 255 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYR 296 + K + + HKGP ++ ++T + +G++ SDP + Sbjct: 256 ---TELVKTLRILKDHKGPKLLHVITKKGKGYTKAESDPIKFH 295 >gi|118595506|sp|Q894H0|DXS_CLOTE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS Length = 618 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 49/215 (22%), Positives = 82/215 (38%), Gaps = 58/215 (26%) Query: 129 LTGRQGG------ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G I+ G S + F GH +S G+A A + + Sbjct: 82 LTGRRSGFQNLRKINGLSGFPKRCESKFDHFETGHS--STSISSALGMARARDLKGENYN 139 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG-------TSVSRASAQTNF 235 V GDGA G E+ N + ++ +NQ ++G T +S N+ Sbjct: 140 VVAVIGDGALTGGMALEALNDVGDNKTKLTIILNDNQMSIGKNVGGLSTYLSSLRIDPNY 199 Query: 236 SK----------------RGVSFN------------IPGM-----------QVDGMDIRA 256 +K +GV+ N +PGM +DG +I+ Sbjct: 200 NKFKRDVEGIIKKIPNIGKGVAKNLERVKDGVKQVLVPGMLFENMGIKYFGPIDGHNIKQ 259 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + MDKA + K P+II ++T + +G+ ++ Sbjct: 260 LSKVMDKA----KNMKEPVIIHVVTTKGKGYKFAE 290 >gi|255070459|ref|XP_002507311.1| predicted protein [Micromonas sp. RCC299] gi|226522586|gb|ACO68569.1| predicted protein [Micromonas sp. RCC299] Length = 738 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 30/64 (46%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G G+A A + + GDGA G YE+ N A + N+I ++ Sbjct: 194 GAGHSSTSISAGLGMAVARDMQGRSNHVIAVIGDGAITGGMAYEAMNNAGYLDTNMIIIL 253 Query: 216 ENNQ 219 +NQ Sbjct: 254 NDNQ 257 >gi|261341012|ref|ZP_05968870.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacter cancerogenus ATCC 35316] gi|288316877|gb|EFC55815.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacter cancerogenus ATCC 35316] Length = 620 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 18/109 (16%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFA----NKYR 177 LTGR+ G + KGG +H F S + GH +S G GIA A NK R Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKENKQR 144 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 R+ +CV+ GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RT--VCVI--GDGAITAGMAFEAMNHAGDIKPDMLVILNDNEMSISENV 189 >gi|71083316|ref|YP_266035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter ubique HTCC1062] gi|118595598|sp|Q4FN07|DXS_PELUB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|71062429|gb|AAZ21432.1| 1-D-deoxyxylulose 5-phosphate synthase [Candidatus Pelagibacter ubique HTCC1062] Length = 637 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 47/213 (22%), Positives = 86/213 (40%), Gaps = 49/213 (23%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANKYRRSDKI--CV 184 LTGR+ I + +G + F+ ++ Y G + S+ + + A + S+K+ + Sbjct: 84 LTGRKSKIKTLRQGNGLSGFTKRSESEYDPFGAAHSSTSISSALGMAEANKLSNKLNNII 143 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS----------------- 227 GDGA + G YE+ N A +I ++ +N ++ V Sbjct: 144 AVIGDGAISAGMAYEAMNNAGASKTKMIVILNDNDMSIAKPVGAMRTYLAKLLTGKIYFS 203 Query: 228 -RASAQ---TNFSKR------------------GVSFNIPGM----QVDGMDIRAVKATM 261 R + + + FSKR G FN G +DG D+ + + Sbjct: 204 LRETFKLIVSAFSKRFSVKAGKAEDFLRSAVTGGTLFNSLGFYYVGPIDGHDLSTLIPIL 263 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 A H+GPI+I + T + +G+S ++ A+ Sbjct: 264 KN--ARDSKHQGPIMIHIKTQKGKGYSYAEKAS 294 >gi|218199226|gb|EEC81653.1| hypothetical protein OsI_25196 [Oryza sativa Indica Group] Length = 713 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +LG +A +++ I V+ GDGA GQ YE+ N + Sbjct: 173 SAHDAFGAGHSSTSISAALGMAVARDLLGKKNHVISVI--GDGAMTAGQAYEAMNNSGYL 230 Query: 208 NLNVIYVIENNQ 219 + N+I V+ +N+ Sbjct: 231 DSNMIVVLNDNK 242 >gi|210630072|ref|ZP_03296234.1| hypothetical protein COLSTE_00118 [Collinsella stercoris DSM 13279] gi|210160692|gb|EEA91663.1| hypothetical protein COLSTE_00118 [Collinsella stercoris DSM 13279] Length = 280 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 2/109 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K+ GDG +GQV+E+ A +L N++ +++ Sbjct: 115 GSLGQGISAAVGMALAAKHWGDSYRTFCLLGDGEIEEGQVWEAAMFAGNHHLDNLVLIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKA 264 +N + ++ ++ + + +F +++ DG D+ V+A + A Sbjct: 175 HNGLQIDGTIEEVNSAMPITNKFEAFGFHVIELADGNDMAQVRAAFEAA 223 >gi|222053771|ref|YP_002536133.1| Transketolase domain protein [Geobacter sp. FRC-32] gi|221563060|gb|ACM19032.1| Transketolase domain protein [Geobacter sp. FRC-32] Length = 260 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G ++G GIA+ + + + GDG +G ++E A L N +I+ Sbjct: 108 GSLGHGFNMGMGIAYGFNKQGNGRKVYALIGDGETQEGSIWEGALFAPKLGLGNFTAIID 167 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N + A ++ +F ++VDG D R + + +D+ AH P + Sbjct: 168 HNNLQGYGRPTEICAFEPMKEKWEAFGWHALEVDGHDHRELTSALDE-----DAHGKPKV 222 Query: 277 IEMLTYRYRGHSM 289 + T + +G S Sbjct: 223 VIARTTKGKGVSF 235 >gi|283850299|ref|ZP_06367588.1| deoxyxylulose-5-phosphate synthase [Desulfovibrio sp. FW1012B] gi|283574325|gb|EFC22296.1| deoxyxylulose-5-phosphate synthase [Desulfovibrio sp. FW1012B] Length = 633 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 14/111 (12%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGRQ GG+S G S + F GH +S G+A A + Sbjct: 89 LTGRQEQFHTLRTMGGVS---GFPRPAESPFDHFGVGHS--STSISAALGMAMARDCKGE 143 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 D V GDG+ G YE N A W +I V+ +N+ ++ +V S Sbjct: 144 DHNVVAVIGDGSMTAGLAYEGLNQAGGWGGRLIVVLNDNEMSISKNVGALS 194 >gi|257454096|ref|ZP_05619370.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enhydrobacter aerosaccus SK60] gi|257448574|gb|EEV23543.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enhydrobacter aerosaccus SK60] Length = 723 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 6/95 (6%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G G++ A +Y V GDGA G +E+ N A N ++I V+ Sbjct: 144 GVGHSSTAISAGLGMSLAMRYLGKHDKVVSIVGDGAMTGGMAFEAMNDAVQQNADLIVVL 203 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD 250 +N S+S+A+ FSK + G+ VD Sbjct: 204 NDNDM----SISQATG--GFSKHLATLWQRGLAVD 232 >gi|237747972|ref|ZP_04578452.1| alpha-ketoglutarate decarboxylase [Oxalobacter formigenes OXCC13] gi|229379334|gb|EEO29425.1| alpha-ketoglutarate decarboxylase [Oxalobacter formigenes OXCC13] Length = 953 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 10/133 (7%) Query: 169 GIAFANKYRRSDK-----ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQ 219 G A A + R D + ++ GD + + QG V E+ N+A + ++++ NNQ Sbjct: 337 GSAKARMFHRDDPDGSQVMPILVHGDASFSGQGVVMETLNMAQTRGYSTGGTVHIVLNNQ 396 Query: 220 YAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 TS R S + + + P + V+G D AV A+ + + ++++ Sbjct: 397 IGFTTSDVRESRSSLYCTDVAKMIEAPILHVNGDDPEAVVLATQIALDFRMEFRKDVVVD 456 Query: 279 MLTYRYRGHSMSD 291 ++ YR GH+ D Sbjct: 457 IVCYRKLGHNEQD 469 >gi|50120070|ref|YP_049237.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pectobacterium atrosepticum SCRI1043] gi|81645875|sp|Q6D844|DXS_ERWCT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|49610596|emb|CAG74041.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pectobacterium atrosepticum SCRI1043] Length = 621 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 58/218 (26%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ IS + KGG +H F ++ GH LG +A + + Sbjct: 88 LTGRRDRISTIRQKGG-LHPFPWRDESEYDVLSVGHSSTSISAGLGMAVAAEREGKGRRT 146 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS---AQTNFSKR 238 +CV+ GDGA G +E+ N A +++ V+ +N+ ++ +V + AQ K Sbjct: 147 VCVI--GDGAITAGMAFEAMNHAGDIKSDLLVVLNDNEMSISENVGALNNHLAQLLSGKL 204 Query: 239 GVSFN----------------------------IPGM-----------QVDGMDIRAVKA 259 S +PG VDG D++A+ Sbjct: 205 YASLREGGKKVLSGLPPIKELVKRTEEHLKGMVVPGTLFEELGFNYIGPVDGHDVQALSH 264 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 T+ R+ KGP ++ ++T + +G++ + DP ++ Sbjct: 265 TLKN----MRSLKGPQLLHIMTKKGKGYAPAEQDPISW 298 >gi|115470975|ref|NP_001059086.1| Os07g0190000 [Oryza sativa Japonica Group] gi|34394179|dbj|BAC84616.1| putative 1-deoxyxylulose 5-phosphate synthase [Oryza sativa Japonica Group] gi|50509413|dbj|BAD31023.1| putative 1-deoxyxylulose 5-phosphate synthase [Oryza sativa Japonica Group] gi|113610622|dbj|BAF21000.1| Os07g0190000 [Oryza sativa Japonica Group] gi|215704796|dbj|BAG94824.1| unnamed protein product [Oryza sativa Japonica Group] gi|222636586|gb|EEE66718.1| hypothetical protein OsJ_23394 [Oryza sativa Japonica Group] Length = 713 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +LG +A +++ I V+ GDGA GQ YE+ N + Sbjct: 173 SAHDAFGAGHSSTSISAALGMAVARDLLGKKNHVISVI--GDGAMTAGQAYEAMNNSGYL 230 Query: 208 NLNVIYVIENNQ 219 + N+I V+ +N+ Sbjct: 231 DSNMIVVLNDNK 242 >gi|4239881|dbj|BAA74730.1| transketolase [Ascidia sydneiensis samea] Length = 624 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 2/96 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C GDG +G V+E+ A+ + L N++ +I Sbjct: 123 GSLGQGLGMAAGMAYVGKYIDKSNYRVYCLLGDGEVAEGAVWEAMAFASHYKLDNLVAII 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 + + + + KR +F ++VDG Sbjct: 183 DVTRLGQSEETALGHHTEIYKKRAEAFGWNSIEVDG 218 >gi|332017156|gb|EGI57955.1| 2-oxoglutarate dehydrogenase E1 component, mitochondrial [Acromyrmex echinatior] Length = 1072 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/162 (17%), Positives = 69/162 (42%), Gaps = 4/162 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG V+E+ +++ L + I+++ NNQ T + + + Sbjct: 419 MSILLHGDAAFCGQGIVFETMHLSDLPDYTTHGTIHIVVNNQIGFTTDPRHSRSSPYCTD 478 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV A + ++I++++YR GH+ D + Sbjct: 479 VARVVNAPIFHVNSDDPEAVMHVCKVAAEWRATFHKDVVIDLVSYRRNGHNEIDEPMFTQ 538 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +++ +++ L+ + + ++++++ KI Sbjct: 539 PLMYRKIKDTLSALDKYANSLIESTVVTPAEVEDVKAKYEKI 580 >gi|308184161|ref|YP_003928294.1| transketolase [Helicobacter pylori SJM180] gi|308060081|gb|ADO01977.1| transketolase [Helicobacter pylori SJM180] Length = 641 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQTLLDKQAISHKVYCLC-GDGDLQEGISYESASLAGHLNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + VI ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKTRFLAQNWEVLECDGHDYQAINDALEEA 233 >gi|302879473|ref|YP_003848037.1| deoxyxylulose-5-phosphate synthase [Gallionella capsiferriformans ES-2] gi|302582262|gb|ADL56273.1| deoxyxylulose-5-phosphate synthase [Gallionella capsiferriformans ES-2] Length = 613 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 8/110 (7%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYG--GHGIVGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ +S + +GG + Y G G +S G+A A + S + V Sbjct: 82 LTGRRAAMSGLRMEGGIAGFPKREESPYDTFGTGHSSTSISAALGMAVAAQLSGSARRSV 141 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 GDGA G +E+ N A N N++ ++ +N S+SR N Sbjct: 142 AIIGDGAMTGGMAFEALNNAGAMNANLLVILNDNDM----SISRPVGALN 187 >gi|240850082|ref|YP_002971475.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Bartonella grahamii as4aup] gi|240267205|gb|ACS50793.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Bartonella grahamii as4aup] Length = 635 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 4/101 (3%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 ++GG+S G + S + F GH LG +A A K I V GDGA Sbjct: 98 QEGGLS---GFTKRSESVYDPFGAGHSSTSISAGLGMAVASALKAETRRNIIAVI-GDGA 153 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 + G YE+ N A + +I V+ +N ++ SA Sbjct: 154 MSAGMAYEAMNNAGALDARLIVVLNDNDMSIAPPTGAMSAH 194 >gi|225430192|ref|XP_002282428.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 659 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 50/199 (25%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GG+S G + S + F GHG + +S G G+A A + Sbjct: 114 LTGRRALMHTLRERGGLS---GFTSRSESEYDPFGAGHGC--SSISAGLGMAVARDLKGK 168 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY---------------AMGT 224 + V G+G GQVYE+ A + N++ ++ ++++ A+ + Sbjct: 169 RERIVTVIGNGTTMAGQVYEAMGNAGYLDTNMVVILNDSRHSLHPKLEDGQATPINALSS 228 Query: 225 SVSRASAQTNFSK-----RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI---I 276 ++++ + +F K +GV+ I G + + A +D+ Y R GP+ + Sbjct: 229 TLTKLQSSKSFRKFREAAKGVTKRI------GKGMHELAAKVDE---YARGMVGPLGATL 279 Query: 277 IEMLTYRY----RGHSMSD 291 E L Y GH++ D Sbjct: 280 FEELGLYYIGPVDGHNIED 298 >gi|238602347|ref|XP_002395654.1| hypothetical protein MPER_04260 [Moniliophthora perniciosa FA553] gi|215466765|gb|EEB96584.1| hypothetical protein MPER_04260 [Moniliophthora perniciosa FA553] Length = 165 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 6/111 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFG-DGAANQGQVYESFNIAALWNLNVIYVIE 216 G +G L G+A AN+ DK + C G DG+ +G E+ +A NLNV I+ Sbjct: 57 GRLGHVWPLVNGVALANR----DK-AIFCLGSDGSQQEGNDAEAARLAVAQNLNVKLFID 111 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 +N + S +K + + VDG D+ A+ + VAY Sbjct: 112 DNDVTIAGHPSEYLKGYEIAKTLQGHGLKVVTVDGEDVDALWTAVSTIVAY 162 >gi|206575714|ref|YP_002239562.1| transketolase family protein [Klebsiella pneumoniae 342] gi|206564772|gb|ACI06548.1| transketolase family protein [Klebsiella pneumoniae 342] Length = 281 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 3/125 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A + ++S DG ++G +E+ AA + L N+I +++ Sbjct: 118 GSLGQGLSIAVGMALGLRQKQSTAWVYNSMSDGELDEGSTWEAAMSAAHYGLSNLINLVD 177 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 N Q A G S + ++ +F +VDG D+ AV A D A +Y I Sbjct: 178 VNKQQADGDS-RKILGFEPLHEKWAAFGWYVQRVDGNDLPAVMAAFDNAKSYSGNQPRVI 236 Query: 276 IIEML 280 + + L Sbjct: 237 LCDTL 241 >gi|28211241|ref|NP_782185.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium tetani E88] gi|28203681|gb|AAO36122.1| 1-deoxyxylulose-5-phosphate synthase [Clostridium tetani E88] Length = 620 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 49/215 (22%), Positives = 82/215 (38%), Gaps = 58/215 (26%) Query: 129 LTGRQGG------ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G I+ G S + F GH +S G+A A + + Sbjct: 84 LTGRRSGFQNLRKINGLSGFPKRCESKFDHFETGHS--STSISSALGMARARDLKGENYN 141 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG-------TSVSRASAQTNF 235 V GDGA G E+ N + ++ +NQ ++G T +S N+ Sbjct: 142 VVAVIGDGALTGGMALEALNDVGDNKTKLTIILNDNQMSIGKNVGGLSTYLSSLRIDPNY 201 Query: 236 SK----------------RGVSFN------------IPGM-----------QVDGMDIRA 256 +K +GV+ N +PGM +DG +I+ Sbjct: 202 NKFKRDVEGIIKKIPNIGKGVAKNLERVKDGVKQVLVPGMLFENMGIKYFGPIDGHNIKQ 261 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + MDKA + K P+II ++T + +G+ ++ Sbjct: 262 LSKVMDKA----KNMKEPVIIHVVTTKGKGYKFAE 292 >gi|307265158|ref|ZP_07546717.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919780|gb|EFN49995.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter wiegelii Rt8.B1] Length = 620 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 41/213 (19%), Positives = 82/213 (38%), Gaps = 65/213 (30%) Query: 157 HGIVGA-----QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 H I GA +S GIA A + V GDGA G +E+ N A ++ Sbjct: 106 HDIFGAGHSSTSISAALGIAKARDLKGEKYSVVAVIGDGALTGGMAFEALNNAGRSKTDL 165 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFN---------------------------- 243 I V+ +N+ ++ +V S + + ++N Sbjct: 166 IVVLNHNEMSISENVGSLSLYLSKLRTDPTYNKLKQEVDNLLNIVPPIGKSLHKYIERIK 225 Query: 244 -------IPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +PGM +DG D+ ++ +++A + KGPI++ ++T + + Sbjct: 226 DSVKQLVVPGMFFEEMGFTYLGPIDGHDVDSLIEVLERA----KKIKGPILVHVITKKGK 281 Query: 286 GHSMSD----------PANYRTREEINEMRSNH 308 G+ ++ P + +T + +NE ++ + Sbjct: 282 GYKFAEKFPDKFHSAAPFDIQTGKFVNEGQATY 314 >gi|259503291|ref|ZP_05746193.1| 1-deoxy-D-xylulose 5-phosphate synthase [Lactobacillus antri DSM 16041] gi|259168746|gb|EEW53241.1| 1-deoxy-D-xylulose 5-phosphate synthase [Lactobacillus antri DSM 16041] Length = 604 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 18/168 (10%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRS---DKICVVCFGDGAANQGQVYESFNIA 204 S + F GH ++L G+A A ++ D I V GDG+ + G +E N A Sbjct: 124 SNHDFFQVGH--TSTSIALAVGMAQARDLLQTNDGDNIVAVI-GDGSLSGGLAFEGLNNA 180 Query: 205 ALWNLNVIYVIENNQYAMGTS---VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK--- 258 A N N+I V+ +NQ ++ + + + + S + NI + G+D R VK Sbjct: 181 AKLNSNLIIVVNDNQMSIDENQGGLYQGLKELRDSDGQAANNI--FKFMGLDYRYVKDGN 238 Query: 259 --ATMDKAVAYCRAHKGPIIIEMLTYRYRGH--SMSDPANYRTREEIN 302 TM A + PI++ + T + +G+ ++ D Y R + Sbjct: 239 DLQTMIDAFKAVKDIDHPIVLHVNTLKGKGYEPAVKDKMTYHWRSPFD 286 >gi|227529301|ref|ZP_03959350.1| possible 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus vaginalis ATCC 49540] gi|227350795|gb|EEJ41086.1| possible 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus vaginalis ATCC 49540] Length = 591 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 18/152 (11%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI--CVVCFGDGAANQGQVYESFNIAA 205 S + F GH VSL G+A A D V GDG+ + G +E N AA Sbjct: 111 SVHDFFEIGH--TSTSVSLAVGLAQARDLMHPDSTDNIVAVIGDGSLSGGLAFEGLNNAA 168 Query: 206 LWNLNVIYVIENNQYAMGTSVS------RASAQTNFSKRGVSFNIPGMQ----VDGMDIR 255 + N+I V+ +NQ A+ + TN F G+ DG D++ Sbjct: 169 KLHSNLIIVVNDNQMAIDKDQGGLYQGLKELRDTNGKAENNIFKFMGLDYKYVADGNDLQ 228 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 TM A + PI++ + T + +G+ Sbjct: 229 ----TMIDAFKEVKDIDHPIVLHVNTLKGKGY 256 >gi|75674831|ref|YP_317252.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter winogradskyi Nb-255] gi|118595594|sp|Q3SUZ1|DXS_NITWN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|74419701|gb|ABA03900.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter winogradskyi Nb-255] Length = 666 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + GG + F+ + + F H SLG +A A + Sbjct: 111 LTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISASLG--MAVARDLSGGNNN 168 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDGA + G YE+ N A N +I ++ +N ++ V SA Sbjct: 169 VIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSA 217 >gi|32491168|ref|NP_871422.1| 2-oxoglutarate dehydrogenase E1 component [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166375|dbj|BAC24565.1| sucA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 909 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 10/179 (5%) Query: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 D K ++ QG S K + K F H + V +G A + + ++ Sbjct: 268 DFVKTSGDVKYHQGFCSNIKV-EQETINLKLSFNPSHLEIVNPVVMGIVRANLDSLKDNE 326 Query: 181 KICVV---CFGDGAA-NQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 K C++ GD + QG + E+ N++ + N+ I +I NNQ T VS S T Sbjct: 327 KNCILPITIHGDASVIGQGVIQETLNMSRTASNNIGGTIRIIINNQIGFTTDVS-DSRST 385 Query: 234 NFSKRGVSFN-IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 N+ P + V+G ++ + ++ A+ + ++I+++ YR GH+ +D Sbjct: 386 NYCTDIFKITQCPILHVNGDNVHSAIFAINFALDFRNKFNKDVVIDLVCYRRHGHNEAD 444 >gi|254458798|ref|ZP_05072222.1| 1-deoxy-D-xylulose-5-phosphate synthase [Campylobacterales bacterium GD 1] gi|207084564|gb|EDZ61852.1| 1-deoxy-D-xylulose-5-phosphate synthase [Campylobacterales bacterium GD 1] Length = 606 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 38/83 (45%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH + +G A A K ++ +I V+ GDG+ G VYE+ N Sbjct: 96 SEHDYFVAGHSSTSISLGVGAAKAIALKGEQNSRIPVIMIGDGSMTAGMVYEAMNELGDR 155 Query: 208 NLNVIYVIENNQYAMGTSVSRAS 230 +I ++ +N+ ++ + S Sbjct: 156 KYPMIIILNDNEMSIAKPIGALS 178 >gi|206890684|ref|YP_002248787.1| transketolase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742622|gb|ACI21679.1| transketolase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 608 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 2/110 (1%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S+G G+A KY R V GD +G V+E+ +AA + L N+I +I Sbjct: 113 GSLGQGLSIGVGMAINGKYIDRLPYRVFVLLGDSEMAEGSVWEAIQLAAYYQLDNLIGII 172 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + N+ ++KR +F + +DG + + ++A+ Sbjct: 173 DVNRLGQRGETMYGHDLDAYAKRISAFGWKTICIDGHEFNEIFKAYEEAL 222 >gi|119593159|gb|EAW72753.1| transketolase-like 1, isoform CRA_e [Homo sapiens] Length = 435 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 6/149 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 38 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 97 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 98 DVNRLGHSGALPAEHCINIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 154 Query: 276 IIEMLTYRYRG-HSMSDPANYRTREEINE 303 + T++ RG S+ D ++ + E Sbjct: 155 AVVAKTFKGRGTPSIEDAESWHAKPMPRE 183 >gi|51491841|ref|NP_001003906.1| transketolase [Bos taurus] gi|52783426|sp|Q6B855|TKT_BOVIN RecName: Full=Transketolase; Short=TK gi|50844503|gb|AAT84375.1| transketolase [Bos taurus] Length = 623 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGELSEGSVWEAMAFASIYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ + P Sbjct: 183 DINRLGQSDPAPLQHQMDIYQKRCEAFGWNAVIVDGHSVEEL------CKAFGQVKNQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|91070551|gb|ABE11455.1| 1-deoxy-D-xylulose 5-phosphate synthase [uncultured Prochlorococcus marinus clone HOT0M-7B6] Length = 629 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 10/141 (7%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYV 214 G G +S G+A A + + CV GDGA G E+ N A L N ++ + Sbjct: 111 GAGHASTSISAALGMAIARDRKGENYKCVAVIGDGALTGGMALEAINHAGHLPNTPLVVI 170 Query: 215 IENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + +N ++ V R S F V ++ + + G DI + +V Sbjct: 171 LNDNDMSISPPVGALSSYLNKVRVSPPLQFLSDSVQESVKNIPLIGKDIPEELKNIKGSV 230 Query: 266 AYCRAHKGPIIIEMLTYRYRG 286 K + E L + Y G Sbjct: 231 RRLSVPKVGAVFEELGFTYMG 251 >gi|261821904|ref|YP_003260010.1| transketolase [Pectobacterium wasabiae WPP163] gi|261605917|gb|ACX88403.1| Transketolase domain protein [Pectobacterium wasabiae WPP163] Length = 276 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K S + V GDG +G +E+ +AA + L N+I + + Sbjct: 121 GALGHGLPVAVGIALAAKRDNSPRRVFVLTGDGELAEGSNWEAALVAAHYQLDNLIIIND 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N+ + + +++ +F + + G D+++V T++ Sbjct: 181 KNKLQLAGTTCSIMNTDPLAEKWQAFGLQVTECAGNDMQSVVETLE 226 >gi|238765453|ref|ZP_04626374.1| 1-deoxy-D-xylulose-5-phosphate synthase [Yersinia kristensenii ATCC 33638] gi|238696347|gb|EEP89143.1| 1-deoxy-D-xylulose-5-phosphate synthase [Yersinia kristensenii ATCC 33638] Length = 619 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 60/219 (27%) Query: 129 LTGR--QGGISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR Q G + K G +H F S + GH +S G G+A A + D+ Sbjct: 88 LTGRREQIGTIRQKDG-LHPFPWRGESEYDVLSVGHS--STSISAGLGMAVAAEREGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS-------------- 227 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIHSDMLVILNDNEMSISENVGGLNNHLAQLLSGKL 204 Query: 228 ----RASAQTNFS---------KRG----------------VSFNIPGMQVDGMDIRAVK 258 R + FS KR + FN G VDG D++A+ Sbjct: 205 YASLREGGKKAFSGLPPIKDLLKRTEEHLKGMVVPSTLFEELGFNYIG-PVDGHDVQALT 263 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 T+ R+ KGP ++ ++T + +G++ + DP + Sbjct: 264 QTLKN----MRSLKGPQLLHIMTKKGKGYAPAEKDPIGW 298 >gi|172036316|ref|YP_001802817.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. ATCC 51142] gi|226801549|sp|B1WWM7|DXS_CYAA5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|171697770|gb|ACB50751.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. ATCC 51142] Length = 636 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 17/131 (12%) Query: 120 VDASKIMAELTGRQGGISKGKGGSMHMFST---KNGFYG------------GHGIVGAQV 164 +D K++ ++ G Q K G H F T K+G G G G + Sbjct: 61 LDRDKVIWDV-GHQAYPHKMLTGRYHRFHTLRQKDGIAGYLKRCESNFDHFGAGHASTSI 119 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMG 223 S G G+A A + D V GDGA G E+ N A L + N++ V+ +N+ ++ Sbjct: 120 SAGLGMALARDAKGEDYKVVSIIGDGALTGGMALEAINHAGHLPHTNLMVVLNDNEMSIS 179 Query: 224 TSVSRASAQTN 234 +V S N Sbjct: 180 PNVGAISRYLN 190 >gi|326390208|ref|ZP_08211769.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter ethanolicus JW 200] gi|325993856|gb|EGD52287.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter ethanolicus JW 200] Length = 620 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 41/213 (19%), Positives = 82/213 (38%), Gaps = 65/213 (30%) Query: 157 HGIVGA-----QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 H I GA +S GIA A + V GDGA G +E+ N A ++ Sbjct: 106 HDIFGAGHSSTSISAALGIAKARDLKGEKYSVVAVIGDGALTGGMAFEALNNAGRSKTDL 165 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFN---------------------------- 243 I V+ +N+ ++ +V S + + ++N Sbjct: 166 IVVLNHNEMSISENVGSLSLYLSKLRTDPTYNKLKQEVDNLLNIVPPIGKSLHKYIERIK 225 Query: 244 -------IPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +PGM +DG D+ ++ +++A + KGPI++ ++T + + Sbjct: 226 DSVKQLVVPGMFFEEMGFTYLGPIDGHDVDSLIEVLERA----KKIKGPILVHVITKKGK 281 Query: 286 GHSMSD----------PANYRTREEINEMRSNH 308 G+ ++ P + +T + +NE ++ + Sbjct: 282 GYKFAEKFPDKFHSAAPFDIQTGKFVNEGQATY 314 >gi|152941228|gb|ABS45051.1| transketolase [Bos taurus] Length = 596 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 96 GSLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGELSEGSVWEAMAFASIYKLDNLVAIL 155 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ + P Sbjct: 156 DINRLGQSDPAPLQHQMDIYQKRCEAFGWNAVIVDGHSVEEL------CKAFGQVKNQPT 209 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 210 AIIAKTFKGRG 220 >gi|160896177|ref|YP_001561759.1| transketolase domain-containing protein [Delftia acidovorans SPH-1] gi|160361761|gb|ABX33374.1| Transketolase domain protein [Delftia acidovorans SPH-1] Length = 286 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 3/137 (2%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G + + G+A A +++ SD DG ++G +E+ AA Sbjct: 109 MASYTPGMEISGGSLGQGLPIAVGMALALRHKGSDAFVYNSMSDGELDEGSTWEAALSAA 168 Query: 206 LWNLN--VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 L + V NNQ A G S +R + + +F +VDG D+ V D Sbjct: 169 HHGLGRLICLVDVNNQQADGPS-TRMLGFEPLADKWAAFGWHVQRVDGNDLAQVVQAFDA 227 Query: 264 AVAYCRAHKGPIIIEML 280 A A I+ + L Sbjct: 228 ARALAEDRPRVILCDTL 244 >gi|15888088|ref|NP_353769.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens str. C58] gi|22095590|sp|Q8UHD7|DXS_AGRT5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|15155716|gb|AAK86554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens str. C58] Length = 639 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/76 (26%), Positives = 35/76 (46%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G G+A A SD+ + GDG+ + G +E+ N A + +I ++ Sbjct: 118 GAGHSSTSISAGLGMAVAAGLDGSDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVIL 177 Query: 216 ENNQYAMGTSVSRASA 231 +N ++ SA Sbjct: 178 NDNDMSIAPPTGAMSA 193 >gi|328786455|ref|XP_391838.3| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like isoform 1 [Apis mellifera] Length = 1072 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/162 (19%), Positives = 70/162 (43%), Gaps = 4/162 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A QG V+E+ +++ L + I+++ NNQ T + + + Sbjct: 419 MSILLHGDAAFCGQGIVFETMHLSDLPDYTTHGTIHIVVNNQIGFTTDPRHSRSSPYCTD 478 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV A + ++I++++YR GH+ D + Sbjct: 479 VARVVNAPIFHVNSDDPEAVMHVCKVAAEWRATFHKDVVIDIVSYRRNGHNEIDEPMFTQ 538 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 ++++ +++ K L + + ++K+++ KI Sbjct: 539 PLMYRKIKNTPPVLDKYAKTLTDDGVVTSEEVKDVKDKYEKI 580 >gi|302036239|ref|YP_003796561.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Nitrospira defluvii] gi|300604303|emb|CBK40635.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Nitrospira defluvii] Length = 648 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 2/92 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH G + G A + + +CVV GDGA G E + A Sbjct: 106 SVYDTFNAGHAGTGVSAAFGMVEAREQRNEKHKVVCVV--GDGAMTAGMTLEGLHHAGGT 163 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 N + I V+ +NQ ++ +V SA N + G Sbjct: 164 NKDFIVVLNDNQMSISKNVGAISAYLNRTFTG 195 >gi|254480945|ref|ZP_05094191.1| 1-deoxy-D-xylulose-5-phosphate synthase [marine gamma proteobacterium HTCC2148] gi|214038740|gb|EEB79401.1| 1-deoxy-D-xylulose-5-phosphate synthase [marine gamma proteobacterium HTCC2148] Length = 661 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 29/210 (13%) Query: 19 PSVSAKRAATSSVDCVDIPFLEGFEVSEFNK-EQELSAYRLMLLIRRFEEKAGQLYGMGM 77 P S+VD D L GF+ + + +EL AY L Y +G Sbjct: 6 PLTPPDTPLLSAVDA-DRSVLNGFDKVQLEQLAEELRAYLL--------------YSVGQ 50 Query: 78 VGGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQ- 133 GG +G + V + T D+++ ++ + H + G ++ T R Sbjct: 51 SGGHFGAGLGVVELTVALHYVFNTPEDRIVWDVGHQTYPHKILTG----RMQQMHTMRHA 106 Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 GG+S S + T F GH +S G+A A + + SD+ + GDGA Sbjct: 107 GGLSGFPKRSESEYDT---FGVGHS--STSISAAMGMALAARQQGSDRKAIAVIGDGAIT 161 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G +E+ A N++ ++ +NQ ++G Sbjct: 162 GGMAFEALAHAGHERPNMLVILNDNQMSIG 191 >gi|188590622|ref|YP_001922658.1| transketolase [Clostridium botulinum E3 str. Alaska E43] gi|188500903|gb|ACD54039.1| transketolase [Clostridium botulinum E3 str. Alaska E43] Length = 270 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S G+A A+K + V GDG +G V+E+ AA + L N++ +++ Sbjct: 115 GSLGQGFSNSCGLALASKMDNKSEKVYVVLGDGEIQEGIVWETAMAAAKFKLDNLVAIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + S + R SF ++ DG + + +KA + P + Sbjct: 175 KNGIQLDGRTSEIMDVDPLADRWKSFGWNVIECDGHNFDEIDEAFNKA---GQVEGKPTV 231 Query: 277 IEMLTYRYRGHSM 289 I T + +G S Sbjct: 232 IIAHTIKGKGISF 244 >gi|209885785|ref|YP_002289642.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha carboxidovorans OM5] gi|209873981|gb|ACI93777.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha carboxidovorans OM5] Length = 638 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 3/80 (3%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A ++ V GDGA + G YE+ N A + +I ++ +N+ ++ Sbjct: 124 ISAGLGMAVARDLAGENRSVVAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNEMSIA 183 Query: 224 TSVSRASAQTNFSKRGVSFN 243 V A +++ R S N Sbjct: 184 PPV---GAMSSYLTRLTSSN 200 >gi|313215389|emb|CBY42965.1| unnamed protein product [Oikopleura dioica] Length = 506 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 7/103 (6%) Query: 184 VVCF-GDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 V C GDG + +G V+E+ A+ + L N+ +I+ N+ + + + RG + Sbjct: 32 VFCMMGDGESAEGSVWEAMQFASHYKLDNLCAIIDVNRLGQSEATALGHEMEIYRARGEA 91 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PIIIEMLTYR 283 + + + +DG D+ AV DKA KG P +I T++ Sbjct: 92 WGMHTLVIDGHDVNAV----DKAFHEAEITKGKPTLIIAKTFK 130 >gi|194751865|ref|XP_001958244.1| GF10824 [Drosophila ananassae] gi|190625526|gb|EDV41050.1| GF10824 [Drosophila ananassae] Length = 623 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Query: 156 GHGIVGAQVSLGTGIAFANKY-RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G +G +++ G+A+ KY ++D V GDG ++G V+ES + AA + L+ + V Sbjct: 120 GTGSLGQGLAVAAGMAYVGKYLDKADYRTYVIIGDGEMSEGSVWESLHFAAYYCLDNLCV 179 Query: 215 I 215 I Sbjct: 180 I 180 >gi|302541905|ref|ZP_07294247.1| 1-deoxy-D-xylulose-5-phosphate synthase [Streptomyces hygroscopicus ATCC 53653] gi|302459523|gb|EFL22616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Streptomyces himastatinicus ATCC 53653] Length = 651 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 58/215 (26%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV-----GAQVSLGTGIAFANKYRRSDKIC 183 LTGRQ K G + + ++ H ++ A + GIA AN+ + Sbjct: 79 LTGRQDFSRLKKKGGLSGYPSRA--ESEHDVIENSHASAVLGWAEGIAKANEIQGKQDHV 136 Query: 184 VVCFGDGAANQGQVYESF-NIAALWNLNVIYVIENNQYAMGTS----------------- 225 V GDGA G +E+ NIAA N ++ V+ +N+++ + Sbjct: 137 VAVIGDGALTGGMAWEALNNIAAAKNRPLVIVVNDNEWSYSPTIGGLANHLATLRTTDGY 196 Query: 226 ----------------VSRASAQT-NFSKRGV-SFNIP-GM----------QVDGMDIRA 256 V R +T + +K+G+ F P GM +DG DI A Sbjct: 197 ERFLARGKDLLERTPVVGRPLYETLHGAKKGLKDFIAPQGMFEDLGLKYVGPIDGHDIEA 256 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 +++ +A + GP+I+ LT + RG++ ++ Sbjct: 257 LESAFQRAKRFG----GPVIVHCLTEKGRGYTPAE 287 >gi|148744821|gb|AAI41999.1| TKT protein [Bos taurus] Length = 623 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGELSEGSVWEAMAFASIYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ + P Sbjct: 183 DINRLGQSDPAPLQHQMDIYQKRCEAFGWNAVIVDGHSVEEL------CKAFGQVKNQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|71735584|ref|YP_272899.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. phaseolicola 1448A] gi|118595603|sp|Q48NX0|DXS_PSE14 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|71556137|gb|AAZ35348.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 630 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 45/230 (19%), Positives = 85/230 (36%), Gaps = 52/230 (22%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ +S + K G Y G+ +S G+A A++ + S++ + Sbjct: 95 LTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIASRLQGSERKSI 154 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV------------SRASAQ 232 GDGA G +E+ N A N++ ++ +N ++ +V SR + Sbjct: 155 AVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSISRNVGGLSNYLAKILSSRTYSS 214 Query: 233 TNFSKRGVSFNIPGM------------------------------QVDGMDIRAVKATMD 262 + V +PG +DG D+ + AT+ Sbjct: 215 MREGSKKVLSRLPGAWEIARRTEEYAKGMLVPGTLFEELGWNYIGPIDGHDLPTLIATLR 274 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDP 310 R KGP + ++T + +G + + DP Y ++ + + P Sbjct: 275 N----MRDLKGPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLNAPAAP 320 >gi|15895347|ref|NP_348696.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium acetobutylicum ATCC 824] gi|21263536|sp|Q97HD5|DXS_CLOAB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|15025065|gb|AAK80036.1|AE007710_6 Deoxyxylulose-5-phosphate synthase [Clostridium acetobutylicum ATCC 824] gi|325509492|gb|ADZ21128.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium acetobutylicum EA 2018] Length = 619 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 2/87 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S +GIA A + + + GDGA G E+ N Sbjct: 107 SIYDAFETGHS--STSISAASGIARARDLSKDNYDVIAVIGDGALTGGMALEALNDIGYK 164 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTN 234 NVI ++ +NQ ++ +V S N Sbjct: 165 KTNVIIILNDNQMSIAKNVGSISKYLN 191 >gi|37525384|ref|NP_928728.1| alpha-ketoglutarate decarboxylase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784811|emb|CAE13723.1| 2-oxoglutarate dehydrogenase E1 component (Alpha-ketoglutarate dehydrogenase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 935 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 5/156 (3%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A QG V E+ N++ V I +I NNQ TS + + T + Sbjct: 352 LPITIHGDAAVTGQGVVQETLNMSQARGYEVGGTIRIIINNQIGFTTSNPKDARSTQYCT 411 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 + P V+ D AV A+ + K ++I+++ YR GH+ +D + Sbjct: 412 DIIKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKCDVMIDLVCYRRHGHNEADEPSAT 471 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +++ + P + +L+ S D+ EI Sbjct: 472 QPMMYQKIKKHPTPRKIYGDKLVAENLISVDDVTEI 507 >gi|304414842|ref|ZP_07395760.1| subunit of E1(0) component of 2-oxoglutarate dehydrogenase [Candidatus Regiella insecticola LSR1] gi|304283111|gb|EFL91525.1| subunit of E1(0) component of 2-oxoglutarate dehydrogenase [Candidatus Regiella insecticola LSR1] Length = 957 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 6/123 (4%) Query: 178 RSDKIC-VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 +SDK+ + GD A QG V E+ N++ V + ++ NNQ TS + + Sbjct: 367 QSDKVLPITIHGDAAITGQGVVQETLNMSQARGYEVGGTVRIVINNQIGFTTSNPQDARS 426 Query: 233 TNF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 T + + P V+ D AV A+ + K ++I+++ YR GH+ +D Sbjct: 427 TEYCTDIAKMVQAPIFHVNADDPEAVAFVTRVALDFRNKFKRDVMIDLVCYRRHGHNEAD 486 Query: 292 PAN 294 N Sbjct: 487 EPN 489 >gi|119593156|gb|EAW72750.1| transketolase-like 1, isoform CRA_b [Homo sapiens] Length = 596 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 6/144 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 94 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 153 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 154 DVNRLGHSGALPAEHCINIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 210 Query: 276 IIEMLTYRYRG-HSMSDPANYRTR 298 + T++ RG S+ D ++ + Sbjct: 211 AVVAKTFKGRGTPSIEDAESWHAK 234 >gi|330877559|gb|EGH11708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 631 Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust. Identities = 49/244 (20%), Positives = 95/244 (38%), Gaps = 56/244 (22%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ +S + K G Y G+ +S G+A A++ + S++ + Sbjct: 95 LTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIASRLQGSERKSI 154 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV------------------ 226 GDGA G +E+ N A N++ ++ +N ++ +V Sbjct: 155 AVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSISRNVGGLSNYLAKILSSRTYTS 214 Query: 227 ---------SRASAQTNFSKRGVSFN----IPGM-----------QVDGMDIRAVKATMD 262 SR ++R + +PG +DG D+ + AT+ Sbjct: 215 MREGSKKVLSRLPGAWEIARRTEEYAKGMLVPGTLFEELGWNYIGPIDGHDLPTLIATLR 274 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLH 320 R KGP + ++T + +G + + DP Y I ++ + P+ V+K++ Sbjct: 275 N----MRDLKGPQFLHVVTKKGKGFAPAEVDPIGYHA---ITKLEPLNAPV-SVQKKVSS 326 Query: 321 NKWA 324 K++ Sbjct: 327 PKYS 330 >gi|116074807|ref|ZP_01472068.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. RS9916] gi|116068029|gb|EAU73782.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. RS9916] Length = 644 Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 13/109 (11%) Query: 139 GKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 G+ G H + G G G G +S G+A A R CV Sbjct: 82 GRYGDFHTLRQQGGVAGYLKRCESDFDHFGAGHASTSISAALGMAIARDRRGESFKCVAV 141 Query: 187 FGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVSRASAQTN 234 GDGA G E+ N A L N ++ V+ +N ++ V S N Sbjct: 142 IGDGALTGGMALEAINHAGHLPNTPLLVVLNDNDMSISPPVGALSTYLN 190 >gi|74220095|dbj|BAE31238.1| unnamed protein product [Mus musculus] Length = 530 Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A ++ L N++ + Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGEVSEGSVWEAMAFAGIYKLDNLVAIF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSDPAPLQHQVDIYQKRCEAFGWHTIIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|167036451|ref|YP_001664029.1| acetolactate synthase, large subunit, biosynthetic type [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320114876|ref|YP_004185035.1| acetolactate synthase large subunit [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855285|gb|ABY93693.1| acetolactate synthase, large subunit, biosynthetic type [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319927967|gb|ADV78652.1| acetolactate synthase, large subunit, biosynthetic type [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 554 Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 57/138 (41%), Gaps = 28/138 (20%) Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 GG G +G G A + R DK V GDG+ + AA++NL VI V Sbjct: 407 GGLGAMG----FGLPAAIGAQVGRPDKRVVNIAGDGSLRMN--IHALETAAVYNLPVITV 460 Query: 215 IENNQ------------YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 + NNQ Y S + +A NF+K F + G++V K + Sbjct: 461 LLNNQTLGMVRQWQNLLYDKRFSHTDLNANLNFAKLANDFGVEGIRV------TTKEEFE 514 Query: 263 KAV--AYCRAHKGPIIIE 278 KA AYC K P +IE Sbjct: 515 KAFKKAYC--EKRPFMIE 530 >gi|331018235|gb|EGH98291.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 631 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 49/244 (20%), Positives = 95/244 (38%), Gaps = 56/244 (22%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ +S + K G Y G+ +S G+A A++ + S++ + Sbjct: 95 LTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIASRLQGSERKSI 154 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV------------------ 226 GDGA G +E+ N A N++ ++ +N ++ +V Sbjct: 155 AVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSISRNVGGLSNYLAKILSSRTYTS 214 Query: 227 ---------SRASAQTNFSKRGVSFN----IPGM-----------QVDGMDIRAVKATMD 262 SR ++R + +PG +DG D+ + AT+ Sbjct: 215 MREGSKKVLSRLPGAWEIARRTEEYAKGMLVPGTLFEELGWNYIGPIDGHDLPTLIATLR 274 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLH 320 R KGP + ++T + +G + + DP Y I ++ + P+ V+K++ Sbjct: 275 N----MRDLKGPQFLHVVTKKGKGFAPAEVDPIGYHA---ITKLEPLNAPV-SVQKKVSS 326 Query: 321 NKWA 324 K++ Sbjct: 327 PKYS 330 >gi|322379551|ref|ZP_08053890.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter suis HS1] gi|322379770|ref|ZP_08054074.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter suis HS5] gi|321147798|gb|EFX42394.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter suis HS5] gi|321148011|gb|EFX42572.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter suis HS1] Length = 609 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 55/297 (18%), Positives = 111/297 (37%), Gaps = 69/297 (23%) Query: 79 GGFCHLCIGQEAVIVGMKMSLTEGDQMI---TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IVG+ + T+++ + H L G ++ + ++ G G Sbjct: 33 GGHLSSSLGAIELIVGLHSVFDKNKHPFIFDTSHQAYAHKLLTGRFESFSTLRQINGLSG 92 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + + S + GH G +SLG G+A A + + VV GDG+ + Sbjct: 93 FVRPSE-------SPYDYCIAGHSSTG--ISLGVGVAKAYALKGITSVPVVMVGDGSLSA 143 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGT---SVSRASAQ------------------- 232 G YE+ + ++ ++ +N+ ++ ++S A +Q Sbjct: 144 GLAYEALDELGDRKYPLVIILNDNEMSIAKPIGAISNALSQLMARPLYQSFRDKIKAILK 203 Query: 233 ---------TNFSKRGVSFNIPGM-----------QVDGMDIRAVKATMDKAVAYCRAHK 272 N + + PG+ +DG D+ A+ +A+ + K Sbjct: 204 SMPDSVSYLANRFEESLKLITPGILFEELGINYMGPLDGHDLEAII----QALKLAKETK 259 Query: 273 GPIIIEMLTYRYRGHSMSD----------PANYRTREEINEMRSNHDPIEQVRKRLL 319 GP+II T + +G+ +++ P + +T + + P E + LL Sbjct: 260 GPLIIHAQTTKGKGYEIAEGKYEKWHGVGPFDLKTGQSLKSAPKVMSPTEVYSQTLL 316 >gi|283786368|ref|YP_003366233.1| transketolase N-terminal section [Citrobacter rodentium ICC168] gi|282949822|emb|CBG89445.1| putative transketolase N-terminal section [Citrobacter rodentium ICC168] Length = 276 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 12/153 (7%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+ ++K R + C+V GDG N+GQ +E+F A LN + + Sbjct: 115 GSLGQGISIAAGMVLSHKLAERPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTIF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ++ N+ + + + ++ +F V G DI + A + A + P Sbjct: 173 VDWNKQQLDGELDDIICPFSLEEKFRAFGFAPFTVKGDDIAGLLAVVQPV---PEAQERP 229 Query: 275 IIIEMLTYRYRG----HSMSDPANYRTREEINE 303 ++ + T + +G +++ + R EE+ + Sbjct: 230 RVVILDTIKGQGVPYLEQLNNSHHLRLTEEMKQ 262 >gi|167742222|ref|ZP_02414996.1| hypothetical protein Bpse14_29405 [Burkholderia pseudomallei 14] Length = 805 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 25/182 (13%) Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 + +F + G + G +G + + G A A ++ +C+V G N G++ + Sbjct: 374 LRIFEPRAGVHALGGGIGQGMQMAIGAALAGNAAKT--VCLVGDGGLMVNVGELATAVQ- 430 Query: 204 AALWNLNVIYVIENNQ-YAMGTSVSRAS----------AQTNFSKRGVSFNIPGMQVDGM 252 N NV+ V+ N+Q Y + ++ A Q +F++ S + ++ + Sbjct: 431 ---ENANVMIVLMNDQCYGVIRNIQDAQYGGRRCYVELHQPDFAQFCASLKLAHHRITSL 487 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIE--MLTYRYRGHSMSDPANYRTREEINEMRSNHDP 310 D ++ V AH+GP+++E ML+ + + P + RTR MR+ H P Sbjct: 488 D------DAERIVREGLAHEGPVLVEVDMLSVGSFAAAFAGPPSRRTRPRSASMRNAHAP 541 Query: 311 IE 312 ++ Sbjct: 542 VD 543 >gi|155369183|dbj|BAF75640.1| 1-deoxy-D-xylulose-5-phosphate synthase [Croton stellatopilosus] Length = 720 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 41/202 (20%), Positives = 83/202 (41%), Gaps = 27/202 (13%) Query: 23 AKRAATSSVDCVDIPF-LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF 81 + R AT +D ++ P ++ + E + E E ++ ++ + GG Sbjct: 68 SNRPATPLLDTINFPIHMKNLSIKELKQLAE-------------ELRSDVIFNVSKTGGH 114 Query: 82 CHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGH-ILACGVDASKIMAELTGRQGGIS 137 +G + V + T D+++ ++ + H IL D + + + G G Sbjct: 115 LGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRDRMRTIRQTNGLSGFTK 174 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 + + S + F GH LG + K R+++ + V+ GDGA GQ Sbjct: 175 RAE-------SEHDCFGTGHSSTTISAGLGMAVGRDLKERKNNVVAVI--GDGAMTAGQA 225 Query: 198 YESFNIAALWNLNVIYVIENNQ 219 YE+ N A + ++I ++ +N+ Sbjct: 226 YEAMNNAGYLDSDMIVILNDNK 247 >gi|313683037|ref|YP_004060775.1| 1-deoxy-d-xylulose-5-phosphate synthase [Sulfuricurvum kujiense DSM 16994] gi|313155897|gb|ADR34575.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfuricurvum kujiense DSM 16994] Length = 606 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/79 (25%), Positives = 36/79 (45%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH + +G A A +S +I VV GDGA + G YE+ N Sbjct: 96 SPMDYFVAGHSSTSISLGVGAAKAIALNNEQSSRIPVVVIGDGAMSAGMAYEALNELGDR 155 Query: 208 NLNVIYVIENNQYAMGTSV 226 ++ ++ +N+ ++ + Sbjct: 156 KYPMVIILNDNEMSISKPI 174 >gi|262041115|ref|ZP_06014333.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041565|gb|EEW42618.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 281 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 3/125 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A + ++S DG ++G +E+ AA + L N+I +++ Sbjct: 118 GSLGQGLSIAVGMALGLRQKQSKAWVYNSMSDGELDEGSTWEAAMSAAHYGLSNLINLVD 177 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 N Q A G S + + +F +VDG D+ AV A D A +Y I Sbjct: 178 VNKQQADGDS-RKILGFEPLQDKWAAFGWYVQRVDGNDLPAVMAAFDNAKSYSGNQPRVI 236 Query: 276 IIEML 280 + + L Sbjct: 237 LCDTL 241 >gi|154426222|gb|AAI51563.1| TKT protein [Bos taurus] gi|157279280|gb|AAI53212.1| TKT protein [Bos taurus] gi|296474775|gb|DAA16890.1| transketolase [Bos taurus] Length = 623 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A+++ L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGELSEGSVWEAMAFASIYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ + P Sbjct: 183 DINRLGQSDPAPLQHQMDIYQKRCEAFGWNAVIVDGHSVEEL------CKAFGQVKNQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|120437790|ref|YP_863476.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gramella forsetii KT0803] gi|117579940|emb|CAL68409.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gramella forsetii KT0803] Length = 592 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 19/143 (13%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 GH +LG IA +N ++K + GD + G +E N A + N N++ ++ Sbjct: 116 GHSSTSISAALGMAIA-SNLKGETEKQHIAVIGDASIASGMAFEGLNHAGVTNANLLVIL 174 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFN------IPGMQ------VDGMDIRAVKATMDK 263 +N A+G S + + +K V + I + VDG D+ + T+ + Sbjct: 175 NDN--AIGIDPSVGALKEYLTKARVGYKPASDNIIEALNFKYFGPVDGHDLEGLLKTLKE 232 Query: 264 AVAYCRAHKGPIIIEMLTYRYRG 286 + KGP + ++T + +G Sbjct: 233 ----MKQIKGPKFLHVITKKGKG 251 >gi|253682532|ref|ZP_04863329.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum D str. 1873] gi|253562244|gb|EES91696.1| transketolase, thiamine diphosphate binding subunit [Clostridium botulinum D str. 1873] Length = 274 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + GDG +GQV+E+ AA + L N+ I+ Sbjct: 117 GSLGQGISTAVGMAMAGKLDNKNYRVYSVLGDGELAEGQVWEASMAAAHYKLDNLTAFID 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + S + +F + +DG D+ V KA+ + KG P Sbjct: 177 YNGLQIDGKTSDVMGSDPLDAKFEAFGWHVITIDGNDLEEVI----KAIEEAKNTKGKPT 232 Query: 276 IIEMLTYRYRGHS 288 +I T + +G S Sbjct: 233 MILAKTVKGKGVS 245 >gi|194871482|ref|XP_001972848.1| GG15748 [Drosophila erecta] gi|190654631|gb|EDV51874.1| GG15748 [Drosophila erecta] Length = 623 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 12/113 (10%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S+ G+A+ KY ++D V GDG A++G V+ES + A + L N+ + Sbjct: 122 GSLGQGISVAAGMAYVGKYLDKADYRTYVIVGDGEASEGAVWESLHFAGHYCLDNLCVIF 181 Query: 216 ENNQY---AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI-RAVKATMDKA 264 + N++ +GT + + +R +F + ++G DI VKA + A Sbjct: 182 DMNKFFCSDIGTELEV------YRERLDAFGFNALVLNGHDIDELVKAFFNAA 228 >gi|33519703|ref|NP_878535.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Blochmannia floridanus] gi|41016952|sp|Q7VRH9|DXS_BLOFL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|33504048|emb|CAD83309.1| 1-deoxyxylulose-5-phosphate synthase [Candidatus Blochmannia floridanus] Length = 617 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 8/116 (6%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I S + +H F +N GH +S G G+A A++ + ++ Sbjct: 88 LTGRKNRIYSIRQRHGLHSFPCRNESKYDVLSVGHS--STSISAGLGLAIASEREKLNRR 145 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 V GDGA G +E+ N A N++ ++ +N ++ +V Q K+ Sbjct: 146 TVCIIGDGALTAGMAFEAINHAGTIKSNLLIILNDNNMSISENVGALHTQCPQQKK 201 >gi|88799590|ref|ZP_01115166.1| 1-deoxy-D-xylulose-5-phosphate synthase [Reinekea sp. MED297] gi|88777675|gb|EAR08874.1| 1-deoxy-D-xylulose-5-phosphate synthase [Reinekea sp. MED297] Length = 626 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISK-GKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ + + G +H F S + F GH +S G+A A++ + + + Sbjct: 94 LTGRREQLPTIRQEGGLHAFPHRGESEYDTFGVGHS--STSISAALGMAIADRRKGNARQ 151 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A N++ V+ +N ++ +V Sbjct: 152 TVAVIGDGALTAGMAFEALNHAGHDGANMLVVLNDNDMSISENV 195 >gi|330991144|ref|ZP_08315098.1| 2-oxoglutarate dehydrogenase E1 component [Gluconacetobacter sp. SXCC-1] gi|329761965|gb|EGG78455.1| 2-oxoglutarate dehydrogenase E1 component [Gluconacetobacter sp. SXCC-1] Length = 957 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 4/123 (3%) Query: 177 RRSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQ 232 +R + V+ GD A A QG VYE+ ++ L I+V+ NNQ T + + Sbjct: 359 QRGRHMGVLLHGDAAFAGQGIVYETLAMSQLIGYRTGGTIHVVVNNQIGFTTVSVHSFSG 418 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 + + P + V+G + AV A + + ++++++ YR GH+ SD Sbjct: 419 LYCTDVAKAVQAPILHVNGDEPEAVIYCSRLAAEFRQKFASDVVLDIVGYRRHGHNESDE 478 Query: 293 ANY 295 ++ Sbjct: 479 PSF 481 >gi|163786616|ref|ZP_02181064.1| 1-deoxy-D-xylulose-5-phosphate synthase [Flavobacteriales bacterium ALC-1] gi|159878476|gb|EDP72532.1| 1-deoxy-D-xylulose-5-phosphate synthase [Flavobacteriales bacterium ALC-1] Length = 594 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 41/199 (20%), Positives = 84/199 (42%), Gaps = 25/199 (12%) Query: 100 TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 T D +I ++ +GH + G K + E + GIS G S + F GH Sbjct: 64 TPDDLLIWDVGHQAYGHKILTG---RKDIFETNRQLNGIS---GFPKRSESEYDAFGVGH 117 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 +S G+A A++ + +K + GD + G +E N + + N++ ++ + Sbjct: 118 S--STSISAALGMAIASQLKSENKHHIAVIGDASIASGMAFEGLNHGGVTDANLLVILND 175 Query: 218 NQYAMGTSVSRASAQTNFSKRG----------VSFNIPGMQVDGMDIRAVKATMDKAVAY 267 N + SV K+G ++F+ G +DG ++ + + +++ Sbjct: 176 NAIGIDPSVGALKQYLTNVKKGTEKQDNIFEALNFDYSG-PIDGHNLPLLLSELER---- 230 Query: 268 CRAHKGPIIIEMLTYRYRG 286 + KGP + ++T + +G Sbjct: 231 LKTVKGPKFLHVITTKGKG 249 >gi|152969385|ref|YP_001334494.1| putative transketolase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893851|ref|YP_002918585.1| putative transketolase [Klebsiella pneumoniae NTUH-K2044] gi|330009945|ref|ZP_08306666.1| Transketolase, thiamine diphosphate binding domain protein [Klebsiella sp. MS 92-3] gi|150954234|gb|ABR76264.1| putative transketolase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546167|dbj|BAH62518.1| putative transketolase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328534659|gb|EGF61229.1| Transketolase, thiamine diphosphate binding domain protein [Klebsiella sp. MS 92-3] Length = 281 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 3/125 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A + ++S DG ++G +E+ AA + L N+I +++ Sbjct: 118 GSLGQGLSIAVGMALGLRQKQSKAWVYNSMSDGELDEGSTWEAAMSAAHYGLSNLINLVD 177 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 N Q A G S + + +F +VDG D+ AV A D A +Y I Sbjct: 178 VNKQQADGDS-RKILGFEPLQDKWAAFGWYVQRVDGNDLPAVMAAFDNAKSYSGNQPRVI 236 Query: 276 IIEML 280 + + L Sbjct: 237 LCDTL 241 >gi|304436514|ref|ZP_07396488.1| transketolase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370560|gb|EFM24211.1| transketolase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 288 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 2/127 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A KY D GDG +GQ++E+ AA + L N+ ++ Sbjct: 123 GSLGQGLSTAAGMAKGAKYLGKDINVYTLLGDGELAEGQIWEATMFAAHYGLDNLCIAVD 182 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + K+ +F +DG D A+ A+ + + K P + Sbjct: 183 VNGLQIDGKTADVMNSAPVDKKFEAFGCAVQWIDGHDFTAL-ASAFRTFHANKGSKKPTV 241 Query: 277 IEMLTYR 283 I M T + Sbjct: 242 ILMKTVK 248 >gi|241762077|ref|ZP_04760161.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373543|gb|EER63130.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 194 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G A A+K SD V GDG+ G YE+ N A +I ++ +N+ ++ Sbjct: 126 ISAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDNEMSIS 185 Query: 224 TSV 226 V Sbjct: 186 PPV 188 >gi|208434308|ref|YP_002265974.1| transketolase A [Helicobacter pylori G27] gi|208432237|gb|ACI27108.1| transketolase A [Helicobacter pylori G27] Length = 641 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 14/129 (10%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A L Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLC-GDGDLQEGISYESASLAGHLRL 178 Query: 210 -NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 N+I + ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 DNLIVIYDSNQISIEGTIN-ISFSEQVKTRFLAQNWEVLECDGHDYQAIHDALEEAK--- 234 Query: 269 RAHKGPIII 277 ++HK ++I Sbjct: 235 KSHKPTLLI 243 >gi|30249148|ref|NP_841218.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas europaea ATCC 19718] gi|41016959|sp|Q82VD3|DXS_NITEU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|30180467|emb|CAD85072.1| Transketolase [Nitrosomonas europaea ATCC 19718] Length = 614 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 4/102 (3%) Query: 129 LTGRQGGISKGK--GGSMHMFSTKNGFYGGHGIV--GAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ G+++ + GG Y G +S G+A A + + + + Sbjct: 82 LTGRRTGMARLRMQGGIAGFPRRDESEYDAFGTAHSSTSISAALGMAVAARLKGVKQHAI 141 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GDGA + G +E+ N A + + N++ ++ +N ++ V Sbjct: 142 AVIGDGAMSAGMAFEALNNAGVMDANLLVILNDNDMSISPPV 183 >gi|332141879|ref|YP_004427617.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|229807532|sp|B4RVY8|DXS_ALTMD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|327551901|gb|AEA98619.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii str. 'Deep ecotype'] Length = 625 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 58/225 (25%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR +S + K G +H F S + F GH +S G+A A + D+ Sbjct: 88 LTGRAERMSTIRQKNG-LHPFPWPPESEYDTFAVGHS--STSISAALGMAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 V GDGA G +E+ N A +++ V+ +N+ ++ +V ++ G Sbjct: 145 KVVSVIGDGAMTAGMAFEALNHAGDIKKDMVVVLNDNEMSISENVGALNSHLARLLTGNF 204 Query: 242 FN-------------------------------IPGM-----------QVDGMDIRAVKA 259 FN +PG +DG D+ AV Sbjct: 205 FNSIRDGGKKLLSNVPPIKEFASRAEEHLKGMVVPGTIFEELGFNYIGPIDGHDVNAVVD 264 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEIN 302 T+ R GP ++ ++T + +G++++ DP + + N Sbjct: 265 TLRN----MRNFDGPQLLHVVTKKGKGYAVAEEDPIKFHAVPKFN 305 >gi|322503715|emb|CBZ38801.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1012 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 14/146 (9%) Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIAALWNL 209 N F G+ QVSLG + R + + GD A A QG +E+ I+ + Sbjct: 390 NPFVQGY-TRAMQVSLG-------EKGREKVLPIEIHGDAAFAGQGVAFETMCISEVGEQ 441 Query: 210 NV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 + ++++ NNQ T + + + G +N P + V+G V + A Sbjct: 442 DTGGTVHLVCNNQIGFTTDPKSSRSSAYCTDLGRVYNCPILHVNGDYPEEVIRVFEFAAE 501 Query: 267 Y-CRAHKGPIIIEMLTYRYRGHSMSD 291 Y R HK ++I+++ YR GH+ +D Sbjct: 502 YRARFHKS-VVIDLVCYRRFGHNEND 526 >gi|307243239|ref|ZP_07525410.1| 1-deoxy-D-xylulose-5-phosphate synthase [Peptostreptococcus stomatis DSM 17678] gi|306493367|gb|EFM65349.1| 1-deoxy-D-xylulose-5-phosphate synthase [Peptostreptococcus stomatis DSM 17678] Length = 648 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 8/100 (8%) Query: 129 LTGRQGGI-SKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGRQ G S + G M F S + F GH +S+ G+A A ++ Sbjct: 82 LTGRQDGFDSLRQYGGMSGFPKESESQHDIFDTGHS--STSISVALGLACARDIQKQKHQ 139 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + GDGA G E+ N N N+I ++ +N+ ++ Sbjct: 140 VIAVIGDGAFTGGMAIEALNNLGYLNKNMIVILNDNEMSI 179 >gi|293370697|ref|ZP_06617247.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides ovatus SD CMC 3f] gi|292634221|gb|EFF52760.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides ovatus SD CMC 3f] Length = 585 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 24/170 (14%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH VSL +G+A ++ + GDG+ + G+ +E + AA Sbjct: 105 SEHDFFVIGH--TSTSVSLASGLAKGRDLTGGNENIIAVIGDGSLSGGEAFEGLDYAAEL 162 Query: 208 NLNVIYVIENNQYAMGTS------------VSRASAQTNFSKRGVSFNIPGMQV-DGMDI 254 N+I ++ +NQ ++ + S + NF K + + + V DG D+ Sbjct: 163 GTNMIIIVNDNQMSIAENHGGLYRNLKELRDSNGQCECNFFK---AMGLDYIYVNDGNDV 219 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEIN 302 +A + +A + + + PI++ + T + +G++ + D Y R N Sbjct: 220 QA----LIEAFSKVKDIQHPIVVHINTLKGKGYACAEQDKETYHWRTPFN 265 >gi|19074262|ref|NP_585768.1| TRANSKETOLASE [Encephalitozoon cuniculi GB-M1] gi|19068904|emb|CAD25372.1| TRANSKETOLASE [Encephalitozoon cuniculi GB-M1] Length = 628 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 10/108 (9%) Query: 183 CVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 CV FGDG +G ESF++AA L N++++ + N+ + S S + ++R +S Sbjct: 138 CV--FGDGCYQEGMGQESFSLAANLKLDNIVFIYDFNKTTIDGPTS-LSMNEDVAQRFLS 194 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 VDG D+ ++ + K V+ P++I + T RG ++ Sbjct: 195 LGFEVDIVDGDDLDGIRKALSKKVS------KPMVIILETIIGRGSTV 236 >gi|28867926|ref|NP_790545.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv. tomato str. DC3000] gi|38372166|sp|Q889Q1|DXS_PSESM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|28851162|gb|AAO54240.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv. tomato str. DC3000] Length = 631 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 49/244 (20%), Positives = 95/244 (38%), Gaps = 56/244 (22%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ +S + K G Y G+ +S G+A A++ + S++ + Sbjct: 95 LTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIASRLQGSERKSI 154 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV------------------ 226 GDGA G +E+ N A N++ ++ +N ++ +V Sbjct: 155 AVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSISRNVGGLSNYLAKILSSRTYTS 214 Query: 227 ---------SRASAQTNFSKRGVSFN----IPGM-----------QVDGMDIRAVKATMD 262 SR ++R + +PG +DG D+ + AT+ Sbjct: 215 MREGSKKVLSRLPGAWEIARRTEEYAKGMLVPGTLFEELGWNYIGPIDGHDLPTLIATLR 274 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLH 320 R KGP + ++T + +G + + DP Y I ++ + P+ V+K++ Sbjct: 275 N----MRDLKGPQFLHVVTKKGKGFAPAEVDPIGYHA---ITKLEPLNAPV-SVQKKVSS 326 Query: 321 NKWA 324 K++ Sbjct: 327 PKYS 330 >gi|294084634|ref|YP_003551392.1| deoxyxylulose-5-phosphate synthase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664207|gb|ADE39308.1| deoxyxylulose-5-phosphate synthase [Candidatus Puniceispirillum marinum IMCC1322] Length = 640 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 2/81 (2%) Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 + F GH +S G G+A A+ + + + + GDGA + G YE+ N A Sbjct: 115 DPFGAGHS--STSISAGLGMAVASDLQSTPRNVIAVIGDGAMSAGMAYEAMNNAGASESR 172 Query: 211 VIYVIENNQYAMGTSVSRASA 231 +I ++ +N ++ V S+ Sbjct: 173 LIVILNDNDMSISQPVGAMSS 193 >gi|268608472|ref|ZP_06142199.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruminococcus flavefaciens FD-1] Length = 632 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 3/84 (3%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF-NIAAL 206 S + F GH VS+ GIA A K + D V GDGA G YE+ N Sbjct: 115 SVHDSFISGHS--STSVSVACGIAEAMKLQGKDNYAVAVIGDGAMTGGMFYEAMNNCGKD 172 Query: 207 WNLNVIYVIENNQYAMGTSVSRAS 230 N+I ++ +N ++ SV S Sbjct: 173 RQSNLIVILNDNNMSISKSVGAVS 196 >gi|209402473|gb|ACI45959.1| putative plastid 1-deoxy-D-xylulose 5-phosphate synthase precursor [Porphyra yezoensis] Length = 660 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 21/129 (16%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GG+S G + S + F GH +S G+A A Sbjct: 74 LTGRRDSMGTMRQSGGLS---GFTKRTESEYDPFGAGHS--STSISAALGMAVARDLAGK 128 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI-ENNQYAMGTSVSRAS------AQ 232 + C+ GDGA G YE+ N A VI V+ +N Q ++ T A+ A Sbjct: 129 NNECIAVIGDGAITGGMAYEAMNNAGYLKNRVIVVLNDNGQVSLPTGTQTAAGVVPSGAL 188 Query: 233 TNFSKRGVS 241 +N++ R +S Sbjct: 189 SNYTSRLLS 197 >gi|167763201|ref|ZP_02435328.1| hypothetical protein BACSTE_01571 [Bacteroides stercoris ATCC 43183] gi|167698495|gb|EDS15074.1| hypothetical protein BACSTE_01571 [Bacteroides stercoris ATCC 43183] Length = 586 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G VSL TG+A A + + GDG+ + G+ +E N AA N I ++ + Sbjct: 113 GHTSTSVSLATGLAKARDLKGGTGNVIAVIGDGSLSGGEAFEGLNNAAELGTNFIVIVND 172 Query: 218 NQYAM 222 NQ ++ Sbjct: 173 NQMSI 177 >gi|16761266|ref|NP_456883.1| transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141038|ref|NP_804380.1| transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412762|ref|YP_149837.1| transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361696|ref|YP_002141332.1| transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|213162066|ref|ZP_03347776.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427001|ref|ZP_03359751.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213609271|ref|ZP_03369097.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646928|ref|ZP_03376981.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289827462|ref|ZP_06546074.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25320951|pir||AC0799 probable transketolase N-terminal section STY2571 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503565|emb|CAD07573.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Typhi] gi|29136663|gb|AAO68229.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127019|gb|AAV76525.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093172|emb|CAR58616.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 276 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 7/112 (6%) Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKIC-----VVCF-GDGAANQGQVYESFNIAALWNLN 210 HG+ SLG GI+ A S K+ V C GDG N+GQ +E+F A LN Sbjct: 108 HGVDATTGSLGQGISIAGGMALSHKLARRPNRVFCIVGDGELNEGQCWEAFQFIAHHRLN 167 Query: 211 VIYV-IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 + V I+ N+ + + + + +F + V G DI + A + Sbjct: 168 NLTVFIDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAVV 219 >gi|150015435|ref|YP_001307689.1| transketolase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149901900|gb|ABR32733.1| Transketolase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 272 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 7/142 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K S GDG A +GQ++E+ AA + L N+ ++ Sbjct: 114 GSLGQGLSAANGMALAGKLDESSYRVYAILGDGEAQEGQIWEAAMSAAHYKLDNLTAFLD 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + S + + ++ SF + +DG + +D A A KG P Sbjct: 174 LNGLQIDGSNEEIMSISPIDEKFKSFGWNVVTIDGHCFEDISKAIDDA----NATKGKPT 229 Query: 276 IIEMLTYRYRGHS-MSDPANYR 296 II T + +G S M + N+ Sbjct: 230 IIICKTIKGKGVSFMENNVNWH 251 >gi|261822524|ref|YP_003260630.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pectobacterium wasabiae WPP163] gi|261606537|gb|ACX89023.1| deoxyxylulose-5-phosphate synthase [Pectobacterium wasabiae WPP163] Length = 621 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ IS + KGG +H F ++ GH LG +A + R Sbjct: 88 LTGRRDRISTIRQKGG-LHPFPWRDESEYDVLSVGHSSTSISAGLGMAVAAEREGRGRRT 146 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 +CV+ GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 147 VCVI--GDGAITAGMAFEAMNHAGDIKSDLLVVLNDNEMSISENV 189 >gi|74222274|dbj|BAE26940.1| unnamed protein product [Mus musculus] Length = 623 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A ++ L N++ + Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGEVSEGSVWEAMAFAGIYKLDNLVAIF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSDPAPLQHQVDIYQKRCEAFGWHTIIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|323701457|ref|ZP_08113130.1| Transketolase domain protein [Desulfotomaculum nigrificans DSM 574] gi|323533466|gb|EGB23332.1| Transketolase domain protein [Desulfotomaculum nigrificans DSM 574] Length = 272 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + ++ V GDG +GQV+E+ A + L N+ ++ Sbjct: 118 GSLGQGLSAAMGMALGLRLDGGEQRVYVLLGDGEVQEGQVWEAAMAAGHFKLDNLTAFLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + V ++ +F +++DG DI + A +++A ++ KG P Sbjct: 178 YNNLQIDGPVDVVMDVAPLPEKWRAFGWHVIEIDGHDIAQILAAIEEA----KSTKGKPT 233 Query: 276 IIEMLTYRYRGHS 288 +I T + +G S Sbjct: 234 MIIARTVKGKGVS 246 >gi|295692217|ref|YP_003600827.1| 1-deoxy-d-xylulose-5-phosphate synthase [Lactobacillus crispatus ST1] gi|295030323|emb|CBL49802.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Lactobacillus crispatus ST1] Length = 581 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 14/144 (9%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G ++L TG+A A + + GDG+ G YE N AA+ N++ Sbjct: 115 YYAVGHTSTSIALATGMAKARDLMGKHENIMALIGDGSMTGGLAYEGLNNAAIEKHNLVV 174 Query: 214 VIENNQYAMGTSVS------RASAQTNFSKRGVSFNIPGMQ----VDGMDIRAVKATMDK 263 V+ +NQ ++ +V + +N + F G DG DI+ +M Sbjct: 175 VVNDNQMSIDDNVGGLVTALKKLRDSNGETKENPFTAMGFDYRYVADGNDIQ----SMID 230 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGH 287 A + PI++ + T + +G+ Sbjct: 231 AFKAVKNVDHPILLHINTLKGKGY 254 >gi|146276938|ref|YP_001167097.1| transketolase [Rhodobacter sphaeroides ATCC 17025] gi|145555179|gb|ABP69792.1| transketolase [Rhodobacter sphaeroides ATCC 17025] Length = 672 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 17/144 (11%) Query: 158 GIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLN 210 G +G +++ G+A A + R+ D GDG +G E+ +A L+ Sbjct: 124 GPLGQGLAMAVGLAMAEESLRARWGAKIIDHYTYCIAGDGCLMEGVSQEAIGLAGRHELS 183 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV---DGMDIRAVKATMDKAVAY 267 + V+ +N G ++ A ++ + + F G V DG D A +D+A+ Sbjct: 184 RLIVMWDNN---GITIDGKVALSDRTDQKARFAAAGWDVFECDGHD----PADIDRALTE 236 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSD 291 +A KGP I T+ G S D Sbjct: 237 AKASKGPAFIACTTHIALGSSAQD 260 >gi|148270183|ref|YP_001244643.1| transketolase [Thermotoga petrophila RKU-1] gi|170288854|ref|YP_001739092.1| transketolase domain-containing protein [Thermotoga sp. RQ2] gi|281412474|ref|YP_003346553.1| Transketolase domain protein [Thermotoga naphthophila RKU-10] gi|147735727|gb|ABQ47067.1| Transketolase domain protein [Thermotoga petrophila RKU-1] gi|170176357|gb|ACB09409.1| Transketolase domain protein [Thermotoga sp. RQ2] gi|281373577|gb|ADA67139.1| Transketolase domain protein [Thermotoga naphthophila RKU-10] Length = 635 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 34/170 (20%), Positives = 71/170 (41%), Gaps = 26/170 (15%) Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 ++ E D+++T +R H + +G +++G G + ++T N Sbjct: 87 RLGFVELDEVLTGFRHHASVF----------------EGHVTRGVG--IIDWTTGN---- 124 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 +G +S G G A A+++ D V D +GQV E+ +A + + + VI Sbjct: 125 ----LGQGLSAGLGFALASRFTGKDYHVFVLMSDAEQAKGQVAEARRVAKKYGVTNLTVI 180 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + A + +R N + ++ +++DG D + + +AV Sbjct: 181 IDYNDAQISGRARDVMPVNIKENYLADGWRVIEIDGHDYEQIYLALKEAV 230 >gi|261417112|ref|YP_003250795.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373568|gb|ACX76313.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302328176|gb|ADL27377.1| putative deoxyxylulose-5-phosphate synthase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 582 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 18/155 (11%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH VSL G+A A R + GDG+ + G+ +E + A + Sbjct: 105 SEHDFFMVGH--TSTSVSLALGLATARDVLRESGNVIAVIGDGSLSGGEAFEGLDNAGEY 162 Query: 208 NLNVIYVIENNQYAM-----GTSVSRASAQTNFSK------RGVSFNIPGMQVDGMDIRA 256 N I V+ +N+ ++ G S A +T K + + F+ ++ G DI Sbjct: 163 ATNFIVVVNDNEMSIAENHGGLYKSLAELRTTAGKSENNYFKSLGFDYKYLE-QGNDI-- 219 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 A++ + + P+++ + T + RG+S ++ Sbjct: 220 --ASLIEIFKSVKNSTRPVVVHLHTQKGRGYSYAE 252 >gi|157413320|ref|YP_001484186.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus str. MIT 9215] gi|166920142|sp|A8G4R9|DXS_PROM2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|157387895|gb|ABV50600.1| 1-deoxy-D-xylulose 5-phosphate synthase [Prochlorococcus marinus str. MIT 9215] Length = 629 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 10/141 (7%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYV 214 G G +S G+A A + + CV GDGA G E+ N A L N ++ V Sbjct: 111 GAGHASTSISAALGMAIARDRKGDNYKCVAVIGDGALTGGMALEAINHAGHLPNTPLVVV 170 Query: 215 IENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + +N ++ V R S F V ++ + + G DI + +V Sbjct: 171 LNDNDMSISPPVGALSSYLNKVRHSPPLQFLSDSVQESVKNIPLIGKDIPEELKNIKGSV 230 Query: 266 AYCRAHKGPIIIEMLTYRYRG 286 K + E L + Y G Sbjct: 231 RRLAVPKVGAVFEELGFTYMG 251 >gi|254362650|ref|ZP_04978737.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica PHL213] gi|153094269|gb|EDN75133.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica PHL213] Length = 617 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 16/105 (15%) Query: 136 ISKGKGGSMHMFSTKNGFYG--------------GHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH K+G + GH +S G GIA A + + + Sbjct: 84 ILTGRRDQMHTIRQKDGIHPFPWREESPYDVLSVGHS--STSISAGLGIAVAAEKENAGR 141 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 142 KTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSISENV 186 >gi|85709905|ref|ZP_01040970.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. NAP1] gi|85688615|gb|EAQ28619.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. NAP1] Length = 641 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 +TGR+ I + +GG + F+ + + F H +S G A ANK Sbjct: 87 ITGRRDRIRTIRQGGGLSGFTKRAESEYDPFGAAHS--STSISAALGFAIANKLNDKPGR 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDGA + G YE+ N AA ++ ++ +N ++ V SA Sbjct: 145 GIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDNDMSIAPPVGGLSA 193 >gi|261493236|ref|ZP_05989763.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496521|ref|ZP_05992901.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307724|gb|EEY09047.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311086|gb|EEY12262.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 617 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 16/105 (15%) Query: 136 ISKGKGGSMHMFSTKNGFYG--------------GHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH K+G + GH +S G GIA A + + + Sbjct: 84 ILTGRRDQMHTIRQKDGIHPFPWREESPYDVLSVGHS--STSISAGLGIAVAAEKENAGR 141 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 142 KTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSISENV 186 >gi|238926429|ref|ZP_04658189.1| possible 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas flueggei ATCC 43531] gi|238885833|gb|EEQ49471.1| possible 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas flueggei ATCC 43531] Length = 609 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 21/135 (15%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G +SL TG+A A RR + I + GDG+ + G+ E N+A N+I V+ Sbjct: 138 GHTSTSISLATGLAKARDLAGRRENVIAFI--GDGSLSGGEALEGLNVAGEMQTNLIIVL 195 Query: 216 ENNQYAMGT------SVSRASAQTNFSKRGVSFNIPGMQ----VDGMD-------IRAVK 258 +N +++ ++ R +TN F G+ DG D RAVK Sbjct: 196 NDNDWSIAENHGGMYAMLRRLRETNGMAEDNLFRAMGLAYRYVADGNDTEALIEAFRAVK 255 Query: 259 ATMDKAVAYCRAHKG 273 T V + KG Sbjct: 256 DTQQPVVVHIHTQKG 270 >gi|147803271|emb|CAN71054.1| hypothetical protein VITISV_003721 [Vitis vinifera] Length = 1638 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A + + GDGA GQ YE+ N A Sbjct: 193 SIYDAFGAGHS--STSISAGLGMAVGRDLLGKNNHVISVIGDGAMTAGQAYEAMNNAGYL 250 Query: 208 NLNVIYVIENN-QYAMGTSV 226 + N+I ++ +N Q ++ T+ Sbjct: 251 DSNLIIILNDNGQVSLPTAT 270 >gi|21391952|gb|AAM48330.1| GH08318p [Drosophila melanogaster] Length = 572 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 18/151 (11%) Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 +++I NNQ T R + S S P V+G D A+ A Y R Sbjct: 13 LHLIVNNQVGFTTPGDRGRSTAYTSDLAKSIQAPVFHVNGDDPEALARVTSLAFRYQREF 72 Query: 272 KGPIIIEMLTYRYRGH------SMSDPANYR---TREEINEMRSNHDPIEQVRKRLLHNK 322 + I I++ +R GH + ++P Y+ RE + ++ + EQV Sbjct: 73 RKDIFIDLNCFRRWGHNELDDPTFTNPLVYKIVHQRESVPDLYAQQLAKEQV-------- 124 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 SE KE+ K + + A + + P Sbjct: 125 -LSESKAKEMRDEYMKYLGEELALAPAYQPP 154 >gi|309973122|gb|ADO96323.1| 1-deoxyxylulose-5-phosphate synthase [Haemophilus influenzae R2846] Length = 625 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ +S + KGG +H F + + GH +S G GIA A + + + Sbjct: 88 LTGRREQMSTIRQKGG-IHPFPWREESEFDVLSVGHS--STSISAGLGIAVAAERENASR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDG+ G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 145 KTVCVIGDGSITAGMAFEALNHAGALHTDMLVILNDNEMSISENV 189 >gi|330964914|gb|EGH65174.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 631 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 42/213 (19%), Positives = 84/213 (39%), Gaps = 52/213 (24%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A++ + S++ + GDGA G +E+ N A N++ ++ Sbjct: 126 GVGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVIL 185 Query: 216 ENNQYAMGTSV---------------------------SRASAQTNFSKRGVSFN----I 244 +N ++ +V SR ++R + + Sbjct: 186 NDNDMSISRNVGGLSNYLAKILSSRTYTSMREGSKKVLSRLPGAWEIARRTEEYAKGMLV 245 Query: 245 PGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--D 291 PG +DG D+ + AT+ R KGP + ++T + +G + + D Sbjct: 246 PGTLFEELGWNYIGPIDGHDLPTLIATLRN----MRDLKGPQFLHVVTKKGKGFAPAEVD 301 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 P Y I ++ + P+ V+K++ K++ Sbjct: 302 PIGYHA---ITKLEPLNAPV-SVQKKVSSPKYS 330 >gi|330502620|ref|YP_004379489.1| transketolase domain-containing protein [Pseudomonas mendocina NK-01] gi|328916906|gb|AEB57737.1| transketolase domain-containing protein [Pseudomonas mendocina NK-01] Length = 283 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 25/240 (10%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVG-----------GFCHLCIGQEAVIVGMKMSLTEG- 102 AYR IRRF + G++ G G VG +CH A+ + + EG Sbjct: 16 AYR----IRRFALQMGEVQGQGYVGQALGYADVLATAYCH------ALNLRPEDPSWEGR 65 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+ + ++ + + +KI+ E G + M + G G +G Sbjct: 66 DRFLLSHGHYAIAFYAALIEAKIIPEDELETYGSDDSRLPMSGMATYTPGMEMSGGSLGQ 125 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQY 220 + + G+A + + + DG ++G +E+ AA L N+I +++ NNQ Sbjct: 126 GLPIAVGMALGLRLKGNPAFVYNSMSDGELDEGSTWEAAMSAAHHGLGNLICLVDINNQQ 185 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A G S ++ + + +F +VDG D+ AV D A A I+ + L Sbjct: 186 ADGPS-TKVLGFEPLADKWAAFGWHVQRVDGNDLAAVIEAFDTARNLTEAKPRVILCDTL 244 >gi|301784887|ref|XP_002927857.1| PREDICTED: transketolase-like protein 2-like [Ailuropoda melanoleuca] Length = 625 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+ A+ + L N++ V Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVFCLLGDGESSEGSVWEALAFASHYGLDNLVAVF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + R +F VDG D+ A+ +A + P Sbjct: 183 DVNRLGQSGVTPLEHCTDIYQNRCEAFGWNTYLVDGHDVEALCQAFWQAA---QVKNKPT 239 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 240 AIIAKTFKGRG 250 >gi|119593157|gb|EAW72751.1| transketolase-like 1, isoform CRA_c [Homo sapiens] Length = 484 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 94 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 153 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 154 DVNRLGHSGALPAEHCINIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 210 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 211 AVVAKTFKGRG 221 >gi|146312160|ref|YP_001177234.1| transketolase subunit A [Enterobacter sp. 638] gi|145319036|gb|ABP61183.1| transketolase subunit A [Enterobacter sp. 638] Length = 269 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 7/146 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G V +GIA+ + ++ V GDG N+G ++ES AA L N+ +++ Sbjct: 118 GSLGLGVGFASGIAWHQRLKQQPWHSYVVLGDGECNEGSIWESALFAAHHGLENLTAIVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N Y + + + + NF + DG DI+A++ +A A +H P Sbjct: 178 VNGYQSDIACEQ-TLKMNFPALWQACGWHVEVCDGHDIQALQ----QAFA-APSHNKPKA 231 Query: 277 IEMLTYRYRGHSMSDPANYRTREEIN 302 + T + +G S + N R +++ Sbjct: 232 VIATTVKGKGISFMENNNAFHRAKLS 257 >gi|6678359|ref|NP_033414.1| transketolase [Mus musculus] gi|730956|sp|P40142|TKT_MOUSE RecName: Full=Transketolase; Short=TK; AltName: Full=P68 gi|452486|gb|AAC52443.1| transketolase [Mus musculus] gi|12832751|dbj|BAB22242.1| unnamed protein product [Mus musculus] gi|12849772|dbj|BAB28474.1| unnamed protein product [Mus musculus] gi|26326449|dbj|BAC26968.1| unnamed protein product [Mus musculus] gi|33244005|gb|AAH55336.1| Transketolase [Mus musculus] gi|74178093|dbj|BAE29835.1| unnamed protein product [Mus musculus] gi|74178235|dbj|BAE29902.1| unnamed protein product [Mus musculus] gi|74178256|dbj|BAE29911.1| unnamed protein product [Mus musculus] gi|74184400|dbj|BAE25728.1| unnamed protein product [Mus musculus] gi|74187719|dbj|BAE24531.1| unnamed protein product [Mus musculus] gi|74188942|dbj|BAE39242.1| unnamed protein product [Mus musculus] gi|74204847|dbj|BAE35484.1| unnamed protein product [Mus musculus] gi|74213796|dbj|BAE29335.1| unnamed protein product [Mus musculus] gi|148692810|gb|EDL24757.1| transketolase, isoform CRA_b [Mus musculus] Length = 623 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A ++ L N++ + Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGEVSEGSVWEAMAFAGIYKLDNLVAIF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSDPAPLQHQVDIYQKRCEAFGWHTIIVDGHSVEEL------CKAFGQAKHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|304321563|ref|YP_003855206.1| 2-oxoglutarate dehydrogenase, E1 component [Parvularcula bermudensis HTCC2503] gi|303300465|gb|ADM10064.1| 2-oxoglutarate dehydrogenase, E1 component [Parvularcula bermudensis HTCC2503] Length = 990 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 72/184 (39%), Gaps = 5/184 (2%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A A QG V E F L ++ I NNQ T+ A + Sbjct: 387 RTQVLPLLLHGDAAFAGQGVVAECFGFTGLRGYRTGGTMHFIVNNQIGFTTAPRFARSSP 446 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 S P V+G D AV A + ++I+M YR GH+ D Sbjct: 447 YPSDVAKMVEAPIFHVNGDDPEAVVFAAKVATEFRMEFGHDVVIDMWCYRRYGHNEGDEP 506 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 ++ T+ + + +H ++ + L + + E EM ++ + A + EP Sbjct: 507 SF-TQPLMYQKIKDHPTTREIYTQRLVEEGLITQEWAEAEMQKFRVFLDEEFEAAGEYEP 565 Query: 354 DPAE 357 A+ Sbjct: 566 KKAD 569 >gi|256751436|ref|ZP_05492314.1| acetolactate synthase, large subunit, biosynthetic type [Thermoanaerobacter ethanolicus CCSD1] gi|256749655|gb|EEU62681.1| acetolactate synthase, large subunit, biosynthetic type [Thermoanaerobacter ethanolicus CCSD1] Length = 554 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 57/138 (41%), Gaps = 28/138 (20%) Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 GG G +G G A + R DK V GDG+ + AA++NL VI V Sbjct: 407 GGLGAMG----FGLPAAIGAQVGRPDKRVVNIAGDGSLRMN--IHALETAAVYNLPVITV 460 Query: 215 IENNQ------------YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 + NNQ Y S + +A NF+K F + G++V K + Sbjct: 461 LLNNQTLGMVRQWQNLLYDKRFSHTDLNANLNFAKLANDFGVEGIRV------TTKEEFE 514 Query: 263 KAV--AYCRAHKGPIIIE 278 KA AYC K P +IE Sbjct: 515 KAFKKAYC--EKRPFMIE 530 >gi|153814764|ref|ZP_01967432.1| hypothetical protein RUMTOR_00979 [Ruminococcus torques ATCC 27756] gi|145847795|gb|EDK24713.1| hypothetical protein RUMTOR_00979 [Ruminococcus torques ATCC 27756] Length = 589 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 9/101 (8%) Query: 129 LTGRQGG------ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G S+ G + S + F GH VSL TG+A A + + Sbjct: 84 LTGRKNGYISDEHFSEDSGYTNPEESEHDFFNVGH--TSTSVSLATGLAKARDIKGDKEN 141 Query: 183 CVVCFGDGAANQGQVYESFNIA-ALWNLNVIYVIENNQYAM 222 + GDG+ + G+ E N+A + N N+I ++ +N+ ++ Sbjct: 142 IIAIIGDGSLSGGEALEGLNVAGSEINSNLIIIVNDNEQSI 182 >gi|11066098|gb|AAG28459.1|AF195533_1 transketolase [Mus musculus] Length = 559 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A ++ L N++ + Sbjct: 59 GSLGQGLGAACGMAYTGKYFDKASYRVYCMLGDGEVSEGSVWEAMAFAGIYKLDNLVAIF 118 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 119 DINRLGQSDPAPLQHQVDIYQKRCEAFGWHTIIVDGHSVEEL------CKAFGQAKHQPT 172 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 173 AIIAKTFKGRG 183 >gi|293381065|ref|ZP_06627086.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus crispatus 214-1] gi|290922365|gb|EFD99346.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus crispatus 214-1] Length = 573 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 14/144 (9%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G ++L TG+A A + + GDG+ G YE N AA+ N++ Sbjct: 107 YYAVGHTSTSIALATGMAKARDLMGKHENIMALIGDGSMTGGLAYEGLNNAAIEKHNLVV 166 Query: 214 VIENNQYAMGTSVS------RASAQTNFSKRGVSFNIPGMQ----VDGMDIRAVKATMDK 263 V+ +NQ ++ +V + +N + F G DG DI+ +M Sbjct: 167 VVNDNQMSIDDNVGGLVTALKKLRDSNGETKENPFTAIGFDYRYVADGNDIQ----SMID 222 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGH 287 A + PI++ + T + +G+ Sbjct: 223 AFKAVKNVDHPILLHINTLKGKGY 246 >gi|251780269|ref|ZP_04823189.1| transketolase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084584|gb|EES50474.1| transketolase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 270 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S G+A A+K + V GDG +G V+E+ AA + L N++ +++ Sbjct: 115 GSLGQGFSNSCGLALASKMDNKSEKVYVVLGDGEIQEGIVWETAMAAAKFKLDNLVAIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + S + R SF ++ DG + + +KA + P + Sbjct: 175 KNGIQLDGRTSEIMDVDPLADRWKSFGWNVIECDGHNFDEIDEAFNKA---GQVKGKPTV 231 Query: 277 IEMLTYRYRGHSM 289 I T + +G S Sbjct: 232 IIAHTIKGKGVSF 244 >gi|288572822|ref|ZP_06391179.1| Transketolase central region [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568563|gb|EFC90120.1| Transketolase central region [Dethiosulfovibrio peptidovorans DSM 11002] Length = 635 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 7/162 (4%) Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 H+ G G G +G +S G G A K R D+ V GDG +GQ+ E+ IA Sbjct: 109 HVERAIPGIDWGSGNLGQGLSAGVGYGLALKKRGLDRHVYVLMGDGEQPKGQLAEARRIA 168 Query: 205 ALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 + ++ +++ N + V N + ++ DG D R++ M+K Sbjct: 169 VAHGIKDITVLVDMNDIQISGKVEDV-MPVNIEALWKADGWAVLKADGHDFRSIYCAMEK 227 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYRTREEINEM 304 A + P +I T +G S M D +Y + ++ Sbjct: 228 A----QGMDVPAVILCSTVMGKGVSFMEDRPDYHGKAATGDL 265 >gi|217031584|ref|ZP_03437089.1| hypothetical protein HPB128_21g142 [Helicobacter pylori B128] gi|298736698|ref|YP_003729228.1| transketolase [Helicobacter pylori B8] gi|216946784|gb|EEC25380.1| hypothetical protein HPB128_21g142 [Helicobacter pylori B128] gi|298355892|emb|CBI66764.1| transketolase [Helicobacter pylori B8] Length = 641 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 14/129 (10%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A L Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKEVISHKVYCLC-GDGDLQEGISYESASLAGHLRL 178 Query: 210 -NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 N+I + ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 DNLIVIYDSNQISIEGAIN-ISFSEQVKTRFLAQNWEVLECDGHDYQAIHNALEEAK--- 234 Query: 269 RAHKGPIII 277 ++HK ++I Sbjct: 235 KSHKPTLLI 243 >gi|148826942|ref|YP_001291695.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittGG] gi|166198621|sp|A5UEV6|DXS_HAEIG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|148718184|gb|ABQ99311.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittGG] Length = 625 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ +S + KGG +H F + + GH +S G GIA A + + + Sbjct: 88 LTGRREQMSTIRQKGG-IHPFPWREESEFDVLSVGHS--STSISAGLGIAVAAERENASR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDG+ G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 145 KTVCVIGDGSITAGMAFEALNHAGALHTDMLVILNDNEMSISENV 189 >gi|153811516|ref|ZP_01964184.1| hypothetical protein RUMOBE_01908 [Ruminococcus obeum ATCC 29174] gi|149832257|gb|EDM87342.1| hypothetical protein RUMOBE_01908 [Ruminococcus obeum ATCC 29174] Length = 589 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 9/101 (8%) Query: 129 LTGRQGG------ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G S+ G + S + F GH VSL TG+A A + + Sbjct: 84 LTGRKNGYISDEHFSEDSGYTNPEESEHDFFNVGH--TSTSVSLATGLAKARDIKGDKEN 141 Query: 183 CVVCFGDGAANQGQVYESFNIA-ALWNLNVIYVIENNQYAM 222 + GDG+ + G+ E N+A + N N+I ++ +N+ ++ Sbjct: 142 IIAIIGDGSLSGGEALEGLNVAGSEINSNLIIIVNDNEQSI 182 >gi|139438909|ref|ZP_01772369.1| Hypothetical protein COLAER_01373 [Collinsella aerofaciens ATCC 25986] gi|133775620|gb|EBA39440.1| Hypothetical protein COLAER_01373 [Collinsella aerofaciens ATCC 25986] Length = 276 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 7/135 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K+ GDG + +GQV+E+ A L N+ +++ Sbjct: 115 GSLGQGISAAVGMAVAAKHWGDTYRTYALLGDGESEEGQVWEAAMFAGNQQLDNLCVIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 +N + V + + + +F +++ DG D ++A A A RA KG P Sbjct: 175 HNGLQIDGPVEEVNDPMPLADKFRAFKFHVVELADGNDFDQIRA----AFAEARATKGQP 230 Query: 275 IIIEMLTYRYRGHSM 289 I T + +G S Sbjct: 231 TAIIAETMKGKGVSF 245 >gi|15611405|ref|NP_223056.1| transketolase [Helicobacter pylori J99] gi|4154867|gb|AAD05919.1| transketolase [Helicobacter pylori J99] Length = 641 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 14/129 (10%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A L Sbjct: 120 GPLGQGFANAVGFSMASQYAQTLLDKEAISHKVYCLC-GDGDLQEGISYESTSLAGHLRL 178 Query: 210 -NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 N+I + ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 DNLIVIYDSNQISIEGAIN-ISFSEQVKTRFLAQNWEVLECDGHDYQAIHNALEEAK--- 234 Query: 269 RAHKGPIII 277 ++HK ++I Sbjct: 235 KSHKPTLLI 243 >gi|331091276|ref|ZP_08340117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium 2_1_46FAA] gi|330404723|gb|EGG84262.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium 2_1_46FAA] Length = 621 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G K G M F + + F GH +S G G A + Sbjct: 80 LTGRKAGFDDLRKHGGMSGFPKRKESDCDAFDTGHS--STSISAGLGYVEAREILGEKHH 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + GDG+ G YE+ N A+ N N I V+ +N ++ +V Sbjct: 138 VISVIGDGSLTGGMAYEALNNASHLNSNFIIVLNDNNMSISPNV 181 >gi|296103980|ref|YP_003614126.1| transketolase subunit B [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058439|gb|ADF63177.1| transketolase subunit B [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 276 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 6/66 (9%) Query: 158 GIVGAQVSLGTGIAFANKYR-RSDKI-CVVCFGDGAANQGQVYESFNIAALWNLN--VIY 213 G +G +S+ G+A ++K RS+++ C+V GDG N+GQ +E+F A LN I+ Sbjct: 115 GSLGQGISIAGGMALSHKLAGRSNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTIF 172 Query: 214 VIENNQ 219 V N Q Sbjct: 173 VDWNKQ 178 >gi|294054586|ref|YP_003548244.1| deoxyxylulose-5-phosphate synthase [Coraliomargarita akajimensis DSM 45221] gi|293613919|gb|ADE54074.1| deoxyxylulose-5-phosphate synthase [Coraliomargarita akajimensis DSM 45221] Length = 634 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 7/104 (6%) Query: 129 LTGRQGG------ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR + G G ++ F +++ +G G G +S G+A A R SD+ Sbjct: 81 LTGRNDERFDKLRLDDGLSGFLNRFESEHDAFGA-GHAGTALSAALGMAAARDKRGSDEH 139 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GD A G E+ N A ++ ++ +N++++ +V Sbjct: 140 VVAVCGDAAFTCGVTMEALNNVATSTKRLVIILNDNKWSIAKNV 183 >gi|291276798|ref|YP_003516570.1| transketolase [Helicobacter mustelae 12198] gi|290963992|emb|CBG39831.1| transketolase [Helicobacter mustelae 12198] Length = 642 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 12/134 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRR-------SDKICVVCFGDGAANQGQVYESFNIAALWNL- 209 G +G V+ G A KY + K+ +C GDG +G YE+ +IA L Sbjct: 119 GPLGQGVANAVGFALGAKYAQKHFGSAIDHKVYCIC-GDGDLQEGISYEASSIAGHHKLN 177 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV--AY 267 N+I + ++N + S A ++ + S R VS ++ DG D A+ A + +A Sbjct: 178 NLILLYDSNHITIEGDTSIAISE-DISLRFVSQGWEVLECDGHDFMAIDAVLKRAREGED 236 Query: 268 CRAHKGPIIIEMLT 281 + K P +I M T Sbjct: 237 AQGQKKPTLIIMHT 250 >gi|256752078|ref|ZP_05492946.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter ethanolicus CCSD1] gi|256749088|gb|EEU62124.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter ethanolicus CCSD1] Length = 620 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 41/213 (19%), Positives = 82/213 (38%), Gaps = 65/213 (30%) Query: 157 HGIVGA-----QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 H I GA +S GIA A + V GDGA G +E+ N A ++ Sbjct: 106 HDIFGAGHSSTSISAALGIAKARDLKGEKYSVVAVIGDGALTGGMAFEALNNAGRSKTDL 165 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFN---------------------------- 243 I V+ +N+ ++ +V S + + ++N Sbjct: 166 IVVLNHNEMSISENVGSLSLYLSKLRTDPTYNKLKQEVDNLLNIVPPIGKSLHKYIERIK 225 Query: 244 -------IPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +PGM +DG D+ ++ +++A + KGPI++ ++T + + Sbjct: 226 DSVKQLVVPGMFFEEMGFTYLGPIDGHDVGSLIEVLERA----KKIKGPILVHVITKKGK 281 Query: 286 GHSMSD----------PANYRTREEINEMRSNH 308 G+ ++ P + +T + +NE ++ + Sbjct: 282 GYKFAEKFPDKFHSAAPFDIQTGKFVNEGQATY 314 >gi|187933476|ref|YP_001887674.1| transketolase [Clostridium botulinum B str. Eklund 17B] gi|187721629|gb|ACD22850.1| transketolase [Clostridium botulinum B str. Eklund 17B] Length = 270 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 4/133 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S G+A A+K + V GDG +G V+E+ AA + L N++ +++ Sbjct: 115 GSLGQGFSNSCGLALASKMDNKSENIYVVLGDGEIQEGIVWETAMAAAKFKLDNLVAIVD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + S R SF ++ DG + + +KA + P + Sbjct: 175 KNGIQLDGRTSEIMGVDPLGDRWKSFGWNVIECDGHNFDEIDEAFNKA---GQVEGKPTV 231 Query: 277 IEMLTYRYRGHSM 289 I T + +G S Sbjct: 232 IIAHTIKGKGISF 244 >gi|332260538|ref|XP_003279343.1| PREDICTED: transketolase-like protein 1-like isoform 2 [Nomascus leucogenys] Length = 595 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 93 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 152 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 153 DVNRLGHSGALPAEHCIDIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 209 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 210 AVVAKTFKGRG 220 >gi|251792483|ref|YP_003007209.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter aphrophilus NJ8700] gi|247533876|gb|ACS97122.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter aphrophilus NJ8700] Length = 619 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ + + KGG +H F ++ GH +S G GIA A + + + Sbjct: 84 LTGRRDQMPTIRQKGG-LHPFPWRDESEFDVLSVGHS--STSISAGLGIAIAAERENAGR 140 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 141 KTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDNEMSISENV 185 >gi|91215471|ref|ZP_01252442.1| 1-deoxy-D-xylulose-5-phosphate synthase [Psychroflexus torquis ATCC 700755] gi|91186423|gb|EAS72795.1| 1-deoxy-D-xylulose-5-phosphate synthase [Psychroflexus torquis ATCC 700755] Length = 592 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/145 (21%), Positives = 65/145 (44%), Gaps = 21/145 (14%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRS-DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G +S G+A +++ + DK + GD + G +E N A + N N++ + Sbjct: 114 GVGHSSTSISAALGMAISSQLKGDFDKQHIAVIGDASIASGMAFEGLNHAGVTNTNLLVI 173 Query: 215 IENNQYAMGTSVSRASAQTNFSK-------------RGVSFNIPGMQVDGMDIRAVKATM 261 + +N A+G S + +T +K ++F+ G +DG D+ + Sbjct: 174 LNDN--AIGIDPSVGALKTYLTKAKIGKKPRQDNIIEALNFSYEG-PIDGHDLPELLKVF 230 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRG 286 ++ + KGP ++ ++T + +G Sbjct: 231 ER----LKTIKGPKLLHIITKKGKG 251 >gi|15889197|ref|NP_354878.1| transketolase [Agrobacterium tumefaciens str. C58] gi|15157018|gb|AAK87663.1| transketolase [Agrobacterium tumefaciens str. C58] Length = 269 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 9/134 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K D V GDG +G +E+ AA + L N+ VI+ Sbjct: 115 GPLGHGLPVAVGMATAAKLSGEDYHTYVMTGDGEMQEGSNWEAIMSAAQFKLNNLTLVID 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N++ G ++ A TN V+ P ++ G ++ + V H+G Sbjct: 175 HNRFQQGAAI----ADTN----DVAPLRPKLEAFGWEVTEINGNAMAEVVPALEHRGNRP 226 Query: 277 IEMLTYRYRGHSMS 290 ++ + +GH +S Sbjct: 227 HCIVAHTNKGHGIS 240 >gi|281345648|gb|EFB21232.1| hypothetical protein PANDA_017697 [Ailuropoda melanoleuca] Length = 625 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+ A+ + L N++ V Sbjct: 124 GSLGQGLGAACGMAYTGKYFDKASYRVFCLLGDGESSEGSVWEALAFASHYGLDNLVAVF 183 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + R +F VDG D+ A+ +A + P Sbjct: 184 DVNRLGQSGVTPLEHCTDIYQNRCEAFGWNTYLVDGHDVEALCQAFWQAA---QVKNKPT 240 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 241 AIIAKTFKGRG 251 >gi|269994368|dbj|BAI50348.1| transketolase [Leiolepis reevesii rubritaeniata] Length = 314 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 7/132 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+ + + L N++ + Sbjct: 72 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGESSEGSVWEALQFGSHYQLDNLVAIF 131 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 + N+ + + KR +F V+G D++ + +A+ KG P Sbjct: 132 DINRLGQSEAAPLRHDTDIYRKRCEAFGWNTYVVNGHDVK----KLCRALWQASQQKGKP 187 Query: 275 IIIEMLTYRYRG 286 I T++ RG Sbjct: 188 TAIIAKTFKGRG 199 >gi|154245985|ref|YP_001416943.1| transketolase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154160070|gb|ABS67286.1| Transketolase domain protein [Xanthobacter autotrophicus Py2] Length = 311 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 1/110 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A + + V GDG +GQV+E+ AA N++ +++ Sbjct: 151 GSIGHALSAGLGMALGGRMQDRAFNVFVMLGDGEMQEGQVWEAAISAAHHKASNLVAIVD 210 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 N + + +V ++ +F VDG D+ A+ + + A Sbjct: 211 RNGFQLDGAVDDVMGIEPLDEKWRAFGWEVHTVDGHDLDALTTLLRQVKA 260 >gi|330958799|gb|EGH59059.1| transketolase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 278 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI-E 216 G +G + + G+A A + S+K V GDG +G +E+ AA + L+ ++VI + Sbjct: 121 GALGHGLPVAVGLALAARMSGSNKRIYVLTGDGELAEGSNWEAAMAAAKYGLDNLFVIVD 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N+ + + + +F + DG D+ + +T+++ +A KG P Sbjct: 181 KNKLQLAGLTAEIMPLDPLDVKWAAFGFAVSECDGNDVEQLVSTLEQ----MQARKGAPQ 236 Query: 276 IIEMLTYRYRGHSM 289 ++ T + +G S Sbjct: 237 VLIAHTIKGKGVSF 250 >gi|290510539|ref|ZP_06549909.1| transketolase [Klebsiella sp. 1_1_55] gi|289777255|gb|EFD85253.1| transketolase [Klebsiella sp. 1_1_55] Length = 281 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 3/125 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A + ++S DG ++G +E+ AA + L N+I +++ Sbjct: 118 GSLGQGLSIAVGMALGLRQKQSTAWVYNSMSDGELDEGSTWEAAMSAAHYGLSNLINLVD 177 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 N Q A G S + + +F +VDG D+ AV A D A +Y I Sbjct: 178 VNKQQADGDS-RKILGFEPLQDKWAAFGWYVQRVDGNDLPAVMAAFDNAKSYSGNQPRVI 236 Query: 276 IIEML 280 + + L Sbjct: 237 LCDTL 241 >gi|148244515|ref|YP_001219209.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Vesicomyosocius okutanii HA] gi|146326342|dbj|BAF61485.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Vesicomyosocius okutanii HA] Length = 600 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 ++GG+S G + H S + F GH +S GIA N S + GDGA Sbjct: 91 QKGGLS---GFTKHSESEHDSFGAGHS--STSISAALGIAIGNSINNSKGKSIAVIGDGA 145 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G +E+ N A + +++ ++ +N ++ +V Sbjct: 146 LTGGMSFEALNHAGDSDADLLIILNDNDMSISKNV 180 >gi|229844083|ref|ZP_04464224.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 6P18H1] gi|229813077|gb|EEP48765.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 6P18H1] Length = 625 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ +S + KGG +H F + + GH +S G GIA A + + + Sbjct: 88 LTGRREQMSTIRQKGG-IHPFPWREESEFDVLSVGHS--STSISAGLGIAVAAERENASR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDG+ G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 145 KTVCVIGDGSITAGMAFEALNHAGALHTDMLVILNDNEMSISENV 189 >gi|288960200|ref|YP_003450540.1| transketolase [Azospirillum sp. B510] gi|288912508|dbj|BAI73996.1| transketolase [Azospirillum sp. B510] Length = 285 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 3/91 (3%) Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMG 223 + GI K ++SD F DG ++G V+E+ AA + L N+I +++ NNQ A G Sbjct: 133 IAVGIGLGLKRKQSDNRVYTLFSDGELDEGSVWEAILSAAHYKLDNLIAIVDVNNQQADG 192 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 S ++ A + + +F ++DG D+ Sbjct: 193 PS-TQVMAFEPLADKLEAFGWFVQRIDGNDL 222 >gi|254522086|ref|ZP_05134141.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Stenotrophomonas sp. SKA14] gi|219719677|gb|EED38202.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Stenotrophomonas sp. SKA14] Length = 943 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 6/122 (4%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A + QG V E F ++ V ++++ NNQ TS + T Sbjct: 345 RKQVMPILIHGDAAFSGQGVVMELFQMSQARGFAVGGTVHIVVNNQVGFTTSNPLDTRST 404 Query: 234 NFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 ++ P + V+G D AV A + + ++I+++ YR GH+ +D Sbjct: 405 RYATDVAKMIAAPVLHVNGDDPEAVVFAAQLAFEFRQTFAKDVVIDLMCYRRWGHNEADE 464 Query: 292 PA 293 PA Sbjct: 465 PA 466 >gi|222529279|ref|YP_002573161.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor bescii DSM 6725] gi|222456126|gb|ACM60388.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor bescii DSM 6725] Length = 616 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 14/107 (13%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GG+S G S + F GH +S+ G A A + Sbjct: 81 LTGRKQKFNTLRKFGGLS---GFPKSKESIYDSFDTGHS--STSISVALGFAVARDLKNE 135 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D + GDGA G YE N A +N ++ ++ +N ++ +V Sbjct: 136 DYDVIAVIGDGALTGGLAYEGLNNAGRYNGKLLVILNDNDMSISKNV 182 >gi|320539326|ref|ZP_08038995.1| 2-oxoglutarate decarboxylase, thiamin-requiring [Serratia symbiotica str. Tucson] gi|320030451|gb|EFW12461.1| 2-oxoglutarate decarboxylase, thiamin-requiring [Serratia symbiotica str. Tucson] Length = 935 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 11/201 (5%) Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY--RRSDKIC-VVCFGDGA-ANQG 195 +GG +H+ T F H + + V +G+ A ++ RS+++ + GD A QG Sbjct: 310 EGGMVHLALT---FNPSHLEIVSPVVMGSVRARRDRLDETRSNRVLPITIHGDAAITGQG 366 Query: 196 QVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDG 251 V E+ N++ V + ++ NNQ TS + T + + P V+ Sbjct: 367 VVQETLNMSQARGYEVGGTVRIVINNQVGFTTSNPLDARSTQYCTDIAKMVQAPIFHVNA 426 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPI 311 D AV A+ + K ++I+++ YR GH+ +D + +++ + P Sbjct: 427 DDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEADEPSATQPVMYQKIKKHPTPR 486 Query: 312 EQVRKRLLHNKWASEGDLKEI 332 E L K AS D E+ Sbjct: 487 EIYADILTEQKVASLEDATEM 507 >gi|256844502|ref|ZP_05549988.1| 1-deoxyxylulose-5-phosphate synthase [Lactobacillus crispatus 125-2-CHN] gi|312977944|ref|ZP_07789690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus crispatus CTV-05] gi|256613580|gb|EEU18783.1| 1-deoxyxylulose-5-phosphate synthase [Lactobacillus crispatus 125-2-CHN] gi|310895251|gb|EFQ44319.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus crispatus CTV-05] Length = 556 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 14/144 (9%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G ++L TG+A A + + GDG+ G YE N AA+ N++ Sbjct: 90 YYAVGHTSTSIALATGMAKARDLMGKHENIMALIGDGSMTGGLAYEGLNNAAIEKHNLVV 149 Query: 214 VIENNQYAMGTSVS------RASAQTNFSKRGVSFNIPGMQ----VDGMDIRAVKATMDK 263 V+ +NQ ++ +V + +N + F G DG DI+ +M Sbjct: 150 VVNDNQMSIDDNVGGLVTALKKLRDSNGETKENPFTAIGFDYRYVADGNDIQ----SMID 205 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGH 287 A + PI++ + T + +G+ Sbjct: 206 AFKAVKNVDHPILLHINTLKGKGY 229 >gi|158257880|dbj|BAF84913.1| unnamed protein product [Homo sapiens] Length = 596 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 6/144 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 94 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 153 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 154 DVNRLGHSGALPAEHCINIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 210 Query: 276 IIEMLTYRYRG-HSMSDPANYRTR 298 + T++ RG S+ D ++ + Sbjct: 211 AVVAKTFKGRGTPSIEDAESWHAK 234 >gi|1232175|emb|CAA62925.1| transketolase [Homo sapiens] gi|1588307|prf||2208324A transketolase Length = 557 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 6/144 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 38 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 97 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 98 DVNRLGHSGALPAEHCINIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 154 Query: 276 IIEMLTYRYRG-HSMSDPANYRTR 298 + T++ RG S+ D ++ + Sbjct: 155 AVVAKTFKGRGTPSIEDAESWHAK 178 >gi|312622475|ref|YP_004024088.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor kronotskyensis 2002] gi|312202942|gb|ADQ46269.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor kronotskyensis 2002] Length = 616 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 14/107 (13%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GG+S G S + F GH +S+ G A A + Sbjct: 81 LTGRKQKFNTLRKFGGLS---GFPKSKESIYDSFDTGHS--STSISVALGFAVARDLKNE 135 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D + GDGA G YE N A +N ++ ++ +N ++ +V Sbjct: 136 DYDVIAVIGDGALTGGLAYEGLNNAGRYNGKLLVILNDNDMSISKNV 182 >gi|213427857|ref|ZP_03360607.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 265 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|188586823|ref|YP_001918368.1| transketolase subunit A [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351510|gb|ACB85780.1| transketolase subunit A [Natranaerobius thermophilus JW/NM-WN-LF] Length = 284 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 4/132 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +GQ++E+ A+ + + N+I +++ Sbjct: 120 GSLGQGLSAANGMALAAKMDGRDYNVYCILGDGEIQEGQIWEAAMTASHYKIDNLIGILD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + V S + +F ++ DG D+ A +++A P++ Sbjct: 180 YNGLQIDGKVEDIMDPGPVSDKWRAFGWYVIETDGHDLEKFNAAIEEAKG---VKDQPVM 236 Query: 277 IEMLTYRYRGHS 288 I T + +G S Sbjct: 237 IVADTVKGKGVS 248 >gi|157369321|ref|YP_001477310.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia proteamaculans 568] gi|166920143|sp|A8GAP2|DXS_SERP5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|157321085|gb|ABV40182.1| deoxyxylulose-5-phosphate synthase [Serratia proteamaculans 568] Length = 621 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 64/221 (28%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ I+ + K G +H F S + GH LG +A A + + Sbjct: 88 LTGRRDKIATIRQKNG-LHPFPWRAESEYDVLSVGHSSTSISAGLGMAVAAAREGKNRRT 146 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS---AQ------ 232 +CV+ GDGA G +E+ N A + +++ V+ +N+ ++ +V + AQ Sbjct: 147 VCVI--GDGAITAGMAFEAMNHAGDIDPDMLVVLNDNEMSISENVGALNNHLAQLLSGKL 204 Query: 233 ------------------------------------TNFSKRGVSFNIPGMQVDGMDIRA 256 T F + G ++ P VDG D++ Sbjct: 205 YSTLREGGKKVLSGLPPIKELVKRTEEHLKGMVVPGTLFEELGFNYIGP---VDGHDVQG 261 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 + AT+ R KGP ++ ++T + RG++ + DP ++ Sbjct: 262 LVATLKN----MRDLKGPQLLHIMTKKGRGYAPAEKDPISF 298 >gi|167037516|ref|YP_001665094.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115930|ref|YP_004186089.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856350|gb|ABY94758.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929021|gb|ADV79706.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 620 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 41/213 (19%), Positives = 82/213 (38%), Gaps = 65/213 (30%) Query: 157 HGIVGA-----QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 H I GA +S GIA A + V GDGA G +E+ N A ++ Sbjct: 106 HDIFGAGHSSTSISAALGIAKARDLKGEKYSVVAVIGDGALTGGMAFEALNNAGRSKTDL 165 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFN---------------------------- 243 I V+ +N+ ++ +V S + + ++N Sbjct: 166 IVVLNHNEMSISENVGSLSLYLSKLRTDPTYNKLKQEVDNLLNIVPPIGKSLHKYIERIK 225 Query: 244 -------IPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +PGM +DG D+ ++ +++A + KGPI++ ++T + + Sbjct: 226 DSVKQLVVPGMFFEEMGFTYLGPIDGHDVGSLIEVLERA----KKIKGPILVHVITKKGK 281 Query: 286 GHSMSD----------PANYRTREEINEMRSNH 308 G+ ++ P + +T + +NE ++ + Sbjct: 282 GYKFAEKFPDKFHSAAPFDIQTGKFVNEGQATY 314 >gi|307129199|ref|YP_003881215.1| transketolase, N-terminal section [Dickeya dadantii 3937] gi|306526728|gb|ADM96658.1| Transketolase, N-terminal section [Dickeya dadantii 3937] Length = 267 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%) Query: 158 GIVGAQVSLGTGIAFANKYR-RSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S+G G+A N+ RS + V GDG +G +E+ A+ + L N+I ++ Sbjct: 113 GALGHGLSIGVGLALGNRLAGRSHRRVFVLMGDGELAEGSNWEAAMAASKFRLDNLIAIV 172 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 + N+ + + +F DG D +A+ Sbjct: 173 DRNRLQLAGKTEDIMPLEPLEDKWRAFGFDVHHCDGHDPQAI 214 >gi|297305083|ref|XP_001090145.2| PREDICTED: transketolase-like 1 isoform 2 [Macaca mulatta] Length = 596 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 94 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 153 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 154 DVNRLGHSGALPAEHCIDIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 210 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 211 AVVAKTFKGRG 221 >gi|33865826|ref|NP_897385.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. WH 8102] gi|41016945|sp|Q7U6P6|DXS_SYNPX RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|33632996|emb|CAE07807.1| 1-deoxy-D-xylulose 5-phosphate synthase [Synechococcus sp. WH 8102] Length = 643 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 42/112 (37%), Gaps = 13/112 (11%) Query: 139 GKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 G+ H +NG G G G +S G+A A R D CV Sbjct: 82 GRFNDFHTLRQQNGVAGYLKRSESNFDHFGAGHASTSISAALGMAMARDNRGEDFKCVAV 141 Query: 187 FGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 GDGA G E+ N A L ++ V+ +N ++ V S N ++ Sbjct: 142 IGDGALTGGMALEAINHAGHLPETPLLVVLNDNDMSISPPVGALSNVLNRAR 193 >gi|22797427|emb|CAD22155.2| 1-deoxy-D-xylulose 5-phosphate synthase [Stevia rebaudiana] Length = 715 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 18/106 (16%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A + GDGA G+ YE+ N A Sbjct: 172 SAHDAFGAGHS--STSISAGLGMAVGRDLLGKTNNVISVIGDGAMTAGRAYEAINNAGFL 229 Query: 208 NLNVIYVIENNQY----------------AMGTSVSRASAQTNFSK 237 + N+I V+ +N+ A+ ++S+ A T F K Sbjct: 230 DSNLIVVLNDNKQVSLPTATLDGPATPVGALSGALSKLQASTKFRK 275 >gi|146293365|ref|YP_001183789.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella putrefaciens CN-32] gi|145565055|gb|ABP75990.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella putrefaciens CN-32] Length = 939 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 5/113 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKR 238 + GD A QG V E+FN++ V I ++ NNQ TS T + + Sbjct: 359 ITIHGDSAITGQGIVQETFNMSQTRGFKVGGSIRIVVNNQVGFTTSNHADVRSTEYCTDI 418 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV AV + K +++E++ YR GH+ +D Sbjct: 419 AKMVQAPIFHVNSDDPEAVAFVSQLAVDFRNEFKRDVVVELVCYRRHGHNEAD 471 >gi|331654512|ref|ZP_08355512.1| transketolase, N- subunit [Escherichia coli M718] gi|331681097|ref|ZP_08381734.1| transketolase, N- subunit [Escherichia coli H299] gi|323969921|gb|EGB65197.1| transketolase [Escherichia coli TA007] gi|331047894|gb|EGI19971.1| transketolase, N- subunit [Escherichia coli M718] gi|331081318|gb|EGI52479.1| transketolase, N- subunit [Escherichia coli H299] Length = 276 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K R++ C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLAGRKNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 ++ N+ + + + + +F + V G DI + Sbjct: 173 VDWNKQQLDGQLDEIINPFDLEGKFRAFGFDVVTVKGDDIEGL 215 >gi|225637461|ref|NP_001139405.1| transketolase-like protein 1 isoform b [Homo sapiens] gi|221043878|dbj|BAH13616.1| unnamed protein product [Homo sapiens] Length = 590 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 6/144 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 88 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 147 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 148 DVNRLGHSGALPAEHCINIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 204 Query: 276 IIEMLTYRYRG-HSMSDPANYRTR 298 + T++ RG S+ D ++ + Sbjct: 205 AVVAKTFKGRGTPSIEDAESWHAK 228 >gi|167827770|ref|ZP_02459241.1| hypothetical protein Bpseu9_29082 [Burkholderia pseudomallei 9] Length = 609 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 25/182 (13%) Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 + +F + G + G +G + + G A A ++ +C+V G N G++ + Sbjct: 178 LRIFEPRAGVHALGGGIGQGMQMAIGAALAGNAAKT--VCLVGDGGLMVNVGELATAVQ- 234 Query: 204 AALWNLNVIYVIENNQ-YAMGTSVSRAS----------AQTNFSKRGVSFNIPGMQVDGM 252 N NV+ V+ N+Q Y + ++ A Q +F++ S + ++ + Sbjct: 235 ---ENANVMIVLMNDQCYGVIRNIQDAQYGGRRCYVELHQPDFAQFCASLKLAHHRITSL 291 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIE--MLTYRYRGHSMSDPANYRTREEINEMRSNHDP 310 D ++ V AH+GP+++E ML+ + + P + RTR MR+ H P Sbjct: 292 D------DAERIVREGLAHEGPVLVEVDMLSVGSFAAAFAGPPSRRTRPRSASMRNAHAP 345 Query: 311 IE 312 ++ Sbjct: 346 VD 347 >gi|148239559|ref|YP_001224946.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. WH 7803] gi|166201542|sp|A5GL34|DXS_SYNPW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|147848098|emb|CAK23649.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. WH 7803] Length = 647 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYV 214 G G +S G+A A + D CV GDGA G E+ N A + N ++ V Sbjct: 111 GAGHASTSISAALGMAMARDRQGLDYKCVAVIGDGALTGGMALEAINHAGHMPNTPLLVV 170 Query: 215 IENNQYAMGTSVSRASAQTN 234 + +N ++ V S+ N Sbjct: 171 LNDNDMSISPPVGALSSHLN 190 >gi|120598556|ref|YP_963130.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella sp. W3-18-1] gi|120558649|gb|ABM24576.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella sp. W3-18-1] gi|319426667|gb|ADV54741.1| 2-oxoglutarate dehydrogenase, E1 subunit [Shewanella putrefaciens 200] Length = 939 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 5/113 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKR 238 + GD A QG V E+FN++ V I ++ NNQ TS T + + Sbjct: 359 ITIHGDSAITGQGIVQETFNMSQTRGFKVGGSIRIVVNNQVGFTTSNHADVRSTEYCTDI 418 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV AV + K +++E++ YR GH+ +D Sbjct: 419 AKMVQAPIFHVNSDDPEAVAFVSQLAVDFRNEFKRDVVVELVCYRRHGHNEAD 471 >gi|332707135|ref|ZP_08427193.1| transketolase [Lyngbya majuscula 3L] gi|332354160|gb|EGJ33642.1| transketolase [Lyngbya majuscula 3L] Length = 637 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 4/150 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI-E 216 G +G VS G+ AN+ + + GDG +GQ +ES AA + + VI + Sbjct: 132 GSLGMGVSKAKGMISANRLMGREGNVYILTGDGELQEGQFWESLQPAANLGFHEMTVIVD 191 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ T VS+ S + ++ ++ + DG D++A+ + K A P I Sbjct: 192 HNKIQSDTWVSQVSDLGDLERKFAAYGWYVERCDGNDVKALGNAIAKLKAVTNQ---PKI 248 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRS 306 + T + +G S + R + + S Sbjct: 249 LIADTIKGKGISFMEHTAIRPEDNLYHFHS 278 >gi|307637051|gb|ADN79501.1| transketolase [Helicobacter pylori 908] gi|325995643|gb|ADZ51048.1| Transketolase [Helicobacter pylori 2018] Length = 641 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 14/129 (10%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A L Sbjct: 120 GPLGQGFANAVGFSMASQYAQTLLDKEAISHKVYCLC-GDGDLQEGISYESASLAGHLRL 178 Query: 210 -NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 N+I + ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 DNLIVIYDSNQISIEGAIN-ISFSEQVKTRFLAQNWEVLECDGHDYQAIHNALEEAK--- 234 Query: 269 RAHKGPIII 277 ++HK ++I Sbjct: 235 KSHKPTLLI 243 >gi|288936406|ref|YP_003440465.1| transketolase [Klebsiella variicola At-22] gi|288891115|gb|ADC59433.1| Transketolase domain protein [Klebsiella variicola At-22] Length = 281 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 3/125 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A + ++S DG ++G +E+ AA + L N+I +++ Sbjct: 118 GSLGQGLSIAVGMALGLRQKQSTAWVYNSMSDGELDEGSTWEAAMSAAHYGLSNLINLVD 177 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 N Q A G S + + +F +VDG D+ AV A D A +Y I Sbjct: 178 VNKQQADGDS-RKILGFEPLQDKWAAFGWYVQRVDGNDLPAVMAAFDNAKSYSGNQPRVI 236 Query: 276 IIEML 280 + + L Sbjct: 237 LCDTL 241 >gi|237808587|ref|YP_002893027.1| Transketolase domain-containing protein [Tolumonas auensis DSM 9187] gi|237500848|gb|ACQ93441.1| Transketolase domain protein [Tolumonas auensis DSM 9187] Length = 276 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K S + V GDG +G +E+ +AA + L N+I + + Sbjct: 121 GALGHGLPVAVGLAIAAKKSNSKRRIFVVTGDGELAEGSNWEAALVAAHYKLDNLIIIND 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N+ + ++ +F + + G D+R+V T++ Sbjct: 181 KNRLQLAGYTKEIMNTDPLDEKWKAFGMQVSECQGNDMRSVVETLE 226 >gi|254527241|ref|ZP_05139293.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus str. MIT 9202] gi|221538665|gb|EEE41118.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus str. MIT 9202] Length = 629 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 10/141 (7%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYV 214 G G +S G+A A + + CV GDGA G E+ N A L N ++ V Sbjct: 111 GAGHASTSISAALGMAIARDRKGDNYKCVAVIGDGALTGGMALEAINHAGHLPNTPLVVV 170 Query: 215 IENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + +N ++ V R S F V ++ + + G DI + +V Sbjct: 171 LNDNDMSISPPVGALSSYLNKVRHSPPLQFLSDSVQESVKNIPLIGKDIPEELKNIKGSV 230 Query: 266 AYCRAHKGPIIIEMLTYRYRG 286 K + E L + Y G Sbjct: 231 RRLAVPKVGAVFEELGFTYMG 251 >gi|218671142|ref|ZP_03520813.1| putative ferredoxin [Rhizobium etli GR56] Length = 263 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 28/134 (20%), Positives = 62/134 (46%), Gaps = 9/134 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K + V GDG +G +E+ AA + L N+ VI+ Sbjct: 115 GPLGHGLPVAVGMAKAAKLSGAGYHTYVVTGDGEMQEGSNWEAIMAAAQFKLDNLTLVID 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N++ G +++ + + +F+ ++DG ++ + ++ H+G Sbjct: 175 HNRFQQGAALAETNDLAPLRPKLEAFDWEVTEIDGNNMSEIVPALE--------HRGSGP 226 Query: 277 IEMLTYRYRGHSMS 290 ++ + +GH +S Sbjct: 227 HCIVAHTNKGHGIS 240 >gi|163742762|ref|ZP_02150147.1| transketolase [Phaeobacter gallaeciensis 2.10] gi|161384017|gb|EDQ08401.1| transketolase [Phaeobacter gallaeciensis 2.10] Length = 673 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 11/141 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLN 210 G +G ++ G A A + +R+ D V GDG +G E+ +A +L Sbjct: 124 GPLGQGIANAVGFAMAEEMQRAHYGRKLVDHHTYVIAGDGCLMEGISQEAIGLAGRHSLG 183 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 + V +N S +TN +R + +++DG D +A+ D+A+ + Sbjct: 184 KLIVFWDNNNITIDGTVELSDRTNQVQRFKASGWQVLEIDGHDPKAI----DEAIEAAKK 239 Query: 271 HKGPIIIEMLTYRYRGHSMSD 291 K P +I T+ GH+ D Sbjct: 240 SKKPSMIACKTHIALGHAAQD 260 >gi|225637463|ref|NP_001139406.1| transketolase-like protein 1 isoform c [Homo sapiens] gi|55666480|emb|CAH69900.1| transketolase-like 1 [Homo sapiens] Length = 540 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 6/144 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 38 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 97 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 98 DVNRLGHSGALPAEHCINIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 154 Query: 276 IIEMLTYRYRG-HSMSDPANYRTR 298 + T++ RG S+ D ++ + Sbjct: 155 AVVAKTFKGRGTPSIEDAESWHAK 178 >gi|66515853|ref|XP_397207.2| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Apis mellifera] Length = 980 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 8/116 (6%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTS--VSRASAQTNF 235 + + GD A + QG VYE+ ++ L N VI+++ NNQ T SR+SA Sbjct: 368 VAFLVHGDAAFSGQGIVYETMHLTNLPNYTTGGVIHIVINNQIGFTTDPRYSRSSAHCTD 427 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 R V N P + D V A Y ++++++ YR GH+ D Sbjct: 428 VARVV--NAPIFHIHADDPDLVTYCSKVASEYRAEFHNDVVVDIVGYRRFGHNELD 481 >gi|225637459|ref|NP_036385.3| transketolase-like protein 1 isoform a [Homo sapiens] gi|122066426|sp|P51854|TKTL1_HUMAN RecName: Full=Transketolase-like protein 1; AltName: Full=Transketolase 2; Short=TK 2; AltName: Full=Transketolase-related protein gi|55666479|emb|CAH69899.1| transketolase-like 1 [Homo sapiens] gi|119593158|gb|EAW72752.1| transketolase-like 1, isoform CRA_d [Homo sapiens] gi|158257954|dbj|BAF84950.1| unnamed protein product [Homo sapiens] Length = 596 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 6/144 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 94 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 153 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 154 DVNRLGHSGALPAEHCINIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 210 Query: 276 IIEMLTYRYRG-HSMSDPANYRTR 298 + T++ RG S+ D ++ + Sbjct: 211 AVVAKTFKGRGTPSIEDAESWHAK 234 >gi|121602344|ref|YP_988719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis KC583] gi|166198602|sp|A1URW6|DXS_BARBK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|120614521|gb|ABM45122.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis KC583] Length = 638 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 15/114 (13%) Query: 129 LTGR---------QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR +GG+S G + S + F GH +S G G+A A+ + Sbjct: 86 LTGRRDKIRTLRQEGGLS---GFTKRSESIYDPFGAGHS--STSISAGLGMAMASALKAE 140 Query: 180 DKICVVC-FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 ++ V+ GDGA + G YE+ N A + +I ++ +N ++ SA Sbjct: 141 ERRNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAH 194 >gi|109132790|ref|XP_001090256.1| PREDICTED: transketolase-like 1 isoform 3 [Macaca mulatta] gi|75076428|sp|Q4R6M8|TKTL1_MACFA RecName: Full=Transketolase-like protein 1; AltName: Full=Transketolase 2; Short=TK 2 gi|67969798|dbj|BAE01247.1| unnamed protein product [Macaca fascicularis] Length = 596 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 94 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 153 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 154 DVNRLGHSGALPAEHCIDIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 210 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 211 AVVAKTFKGRG 221 >gi|315498416|ref|YP_004087220.1| deoxyxylulose-5-phosphate synthase [Asticcacaulis excentricus CB 48] gi|315416428|gb|ADU13069.1| deoxyxylulose-5-phosphate synthase [Asticcacaulis excentricus CB 48] Length = 640 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAF--ANKYRRSDKICV 184 LTGR+ I S +GG + F+ ++ Y G A S+ + F A ++ V Sbjct: 86 LTGRRERIRSLRQGGGLSGFTKRSESPYDPFGAAHAATSISAALGFCAARDHKGETNKVV 145 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 GDG+ + G YE+ N AA N+ ++ +N ++ V SA Sbjct: 146 AVIGDGSMSAGMAYEAMNNAAETTRNLTVILNDNDMSIAPPVGGMSA 192 >gi|189485317|ref|YP_001956258.1| transketolase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287276|dbj|BAG13797.1| transketolase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 274 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G GIA K + + V GDG +G ++E+ AA + N+ +++ Sbjct: 116 GSLGYGLSIGAGIAAGMKQSKKNNRIYVLMGDGEQQEGSIWEAAMSAAHFKFDNLCAIVD 175 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 +N + + + + +F +++DG ++ AV DKA + +G P Sbjct: 176 DNGLQIDGATKDVMNVNPLADKYRAFGWNVIEIDGHNLEAV----DKAYLQFKTEEGRPT 231 Query: 276 IIEMLTYRYRGHS 288 I T + +G S Sbjct: 232 AIIAKTVKGKGVS 244 >gi|295102897|emb|CBL00442.1| Transketolase, N-terminal subunit [Faecalibacterium prausnitzii L2-6] Length = 283 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 8/116 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G VS G+A K+ GDG +G+ +E+F AA + L N+ +++ Sbjct: 118 GSLGQGVSAACGMALGAKHSGKPINVYTILGDGEVEEGECWEAFMFAAHYKLSNLCVMLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD-------IRAVKATMDKAV 265 N + + ++ +FN + ++G D I+A A DK Sbjct: 178 RNHLQIDGTTETVMNSAPLEEKLKAFNFNVLTINGHDYDQIESAIKAFHAENDKPT 233 >gi|291556268|emb|CBL33385.1| Transketolase, N-terminal subunit [Eubacterium siraeum V10Sc8a] Length = 280 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 7/142 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A + K GDG +GQV+E+ AA + L N++ V++ Sbjct: 118 GSLGQGISAACGMALSGKLSNDFYKVYAILGDGEIEEGQVWEAAMFAAHYQLDNLVAVVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 NN + +S + ++ +F + +D D A +KA A G P Sbjct: 178 NNGLQIDGRISDVMSPYPIDEKFKAFGWHVISIDAHDFDA----NEKAFAEAEKISGQPT 233 Query: 276 IIEMLTYRYRGHS-MSDPANYR 296 +I + + +G S M D ++ Sbjct: 234 VIIQRSIKGKGVSFMEDQVSWH 255 >gi|170077789|ref|YP_001734427.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. PCC 7002] gi|229836085|sp|B1XKC5|DXS_SYNP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|169885458|gb|ACA99171.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. PCC 7002] Length = 638 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 13/109 (11%) Query: 139 GKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 G+ H K+G G G G +S G+A A + + CV Sbjct: 82 GRYNEFHTLRQKDGVAGYLKRSENVFDHFGAGHASTSISAALGMALARDAKGEEFKCVAV 141 Query: 187 FGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVSRASAQTN 234 GDGA G E+ N A L + N++ V+ +N+ ++ +V S N Sbjct: 142 IGDGALTGGMALEAINHAGHLPDTNLMVVLNDNEMSISPNVGAISRYLN 190 >gi|167914509|ref|ZP_02501600.1| hypothetical protein Bpse112_28739 [Burkholderia pseudomallei 112] Length = 612 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 25/182 (13%) Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 + +F + G + G +G + + G A A ++ +C+V G N G++ + Sbjct: 181 LRIFEPRAGVHALGGGIGQGMQMAIGAALAGNAAKT--VCLVGDGGLMVNVGELATAVQ- 237 Query: 204 AALWNLNVIYVIENNQ-YAMGTSVSRAS----------AQTNFSKRGVSFNIPGMQVDGM 252 N NV+ V+ N+Q Y + ++ A Q +F++ S + ++ + Sbjct: 238 ---ENANVMIVLMNDQCYGVIRNIQDAQYGGRRCYVELHQPDFAQFCASLKLAHHRITSL 294 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIE--MLTYRYRGHSMSDPANYRTREEINEMRSNHDP 310 D ++ V AH+GP+++E ML+ + + P + RTR MR+ H P Sbjct: 295 D------DAERIVREGLAHEGPVLVEVDMLSVGSFAAAFAGPPSRRTRPRSASMRNAHAP 348 Query: 311 IE 312 ++ Sbjct: 349 VD 350 >gi|253687425|ref|YP_003016615.1| deoxyxylulose-5-phosphate synthase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259645386|sp|C6DB37|DXS_PECCP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|251754003|gb|ACT12079.1| deoxyxylulose-5-phosphate synthase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 621 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 58/218 (26%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ IS + KGG +H F ++ GH LG +A + + Sbjct: 88 LTGRRDRISTIRQKGG-LHPFPWRDESEYDVLSVGHSSTSISAGLGMAVAAEREGKGRRT 146 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS---AQTNFSKR 238 +CV+ GDGA G +E+ N A +++ V+ +N+ ++ +V + AQ K Sbjct: 147 VCVI--GDGAITAGMAFEAMNHAGDIRSDLLVVLNDNEMSISENVGALNNHLAQLLSGKL 204 Query: 239 GVSFN----------------------------IPGM-----------QVDGMDIRAVKA 259 S +PG VDG D++A+ Sbjct: 205 YASLREGGKKVLSGLPPIKELVKRTEEHLKGMVVPGTLFEELGFNYIGPVDGHDVQALAH 264 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 T+ R+ KGP ++ ++T + +G++ + DP ++ Sbjct: 265 TLKN----MRSLKGPQLLHIMTKKGKGYAPAEQDPISW 298 >gi|209360747|gb|ACI43010.1| 1-deoxy-D-xylulose 5-phosphate synthase [Stevia rebaudiana] Length = 715 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 18/106 (16%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A + GDGA G+ YE+ N A Sbjct: 172 SAHDAFGAGHS--STSISAGLGMAVGRDLLGKTNNVISVIGDGAMTAGRAYEAINNAGFL 229 Query: 208 NLNVIYVIENNQY----------------AMGTSVSRASAQTNFSK 237 + N+I V+ +N+ A+ ++S+ A T F K Sbjct: 230 DSNLIVVLNDNKQVSLPTATLDGPATPVGALSGALSKLQASTKFRK 275 >gi|72382140|ref|YP_291495.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus str. NATL2A] gi|118595602|sp|Q46L36|DXS_PROMT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|72001990|gb|AAZ57792.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus str. NATL2A] Length = 628 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 5/111 (4%) Query: 129 LTGRQG---GISKGKGGSMHMFSTKNGF-YGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 LTGR + + KG + ++ T++ F + G G +S G+A A + D CV Sbjct: 80 LTGRYNRFDSLRQQKGVAGYLKRTESKFDHFGAGHASTSISAALGMAIARDRKGEDYKCV 139 Query: 185 VCFGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVSRASAQTN 234 GDGA G E+ N A L ++ V+ +N ++ V S N Sbjct: 140 AVIGDGALTGGMALEAINHAGHLPKTPLLVVLNDNDMSISPPVGALSTYLN 190 >gi|332260536|ref|XP_003279342.1| PREDICTED: transketolase-like protein 1-like isoform 1 [Nomascus leucogenys] Length = 540 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 38 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 97 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A + P Sbjct: 98 DVNRLGHSGALPAEHCIDIYQRRCEAFGWNTYVVDGRDVEALCQVFWQA---SQVKHKPT 154 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 155 AVVAKTFKGRG 165 >gi|124025679|ref|YP_001014795.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus str. NATL1A] gi|166201524|sp|A2C220|DXS_PROM1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|123960747|gb|ABM75530.1| 1-deoxy-D-xylulose 5-phosphate synthase [Prochlorococcus marinus str. NATL1A] Length = 628 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 5/111 (4%) Query: 129 LTGRQG---GISKGKGGSMHMFSTKNGF-YGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 LTGR + + KG + ++ T++ F + G G +S G+A A + D CV Sbjct: 80 LTGRYNRFDSLRQQKGVAGYLKRTESKFDHFGAGHASTSISAALGMAIARDRKGEDYKCV 139 Query: 185 VCFGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVSRASAQTN 234 GDGA G E+ N A L ++ V+ +N ++ V S N Sbjct: 140 AVIGDGALTGGMALEAINHAGHLPKTPLLVVLNDNDMSISPPVGALSTYLN 190 >gi|317181702|dbj|BAJ59486.1| transketolase [Helicobacter pylori F57] Length = 641 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDEEAISHKVYCLC-GDGDLQEGISYESASLAGHLNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + VI ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEA 233 >gi|312127650|ref|YP_003992524.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor hydrothermalis 108] gi|311777669|gb|ADQ07155.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor hydrothermalis 108] Length = 616 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 18/109 (16%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFY-----------GGHGIVGAQVSLGTGIAFANKYR 177 LTGR K K ++ FS +GF GH +S+ G A A + Sbjct: 81 LTGR-----KQKFNTLRKFSGLSGFPKSKESIYDSFDTGHS--STSISVALGFAVARDLK 133 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D + GDGA G YE N A +N ++ ++ +N ++ +V Sbjct: 134 NEDYDVIAVIGDGALTGGLAYEGLNNAGRYNGKLLVILNDNDMSISKNV 182 >gi|312114711|ref|YP_004012307.1| deoxyxylulose-5-phosphate synthase [Rhodomicrobium vannielii ATCC 17100] gi|311219840|gb|ADP71208.1| deoxyxylulose-5-phosphate synthase [Rhodomicrobium vannielii ATCC 17100] Length = 643 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 53/235 (22%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSD-- 180 LTGR+ I + + G + F+ + + F GH +S G G+A A+ + D Sbjct: 87 LTGRRDRIRTLRQPGGLSGFTKRSESEYDPFGAGHS--STSISAGLGMAVASDLKGEDGG 144 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA--------SAQ 232 + + GDG+ + G YE+ N A + +I ++ +N ++ V S++ Sbjct: 145 RNVIAVIGDGSMSAGMAYEAMNNAGAMDARLIIILNDNDMSIAPPVGALSNYLARMHSSE 204 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKA----------------------------TMDKA 264 T R ++ N+ + RA +A +D Sbjct: 205 TFLKVRDIAKNMAQRLPKIWERRAARAEEFTRHLFTGGSLFEELGIYYVGPIDGHDLDIL 264 Query: 265 VAYCR-----AHKGPIIIEMLTYRYRGHSMSD--PANYRTREEINEMRSNHDPIE 312 + R AHKGP++I +T + +G+ ++ P Y + N + D ++ Sbjct: 265 LPVLRNVRDSAHKGPVLIHCVTQKGKGYEPAEKAPDKYHGVTKFNVITGAQDKVK 319 >gi|251791209|ref|YP_003005930.1| transketolase domain-containing protein [Dickeya zeae Ech1591] gi|247539830|gb|ACT08451.1| Transketolase domain protein [Dickeya zeae Ech1591] Length = 267 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 2/102 (1%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S+G G+A NK R+ + V GDG +G +E+ A+ + L N++ ++ Sbjct: 113 GALGHGLSIGAGLALGNKLASRAHRRVFVLMGDGELAEGSNWEAAMAASKFRLDNLVAIV 172 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 + N+ + + + +F ++ DG D A+ Sbjct: 173 DRNRLQLAGKTEDIMPLEPLADKWRAFGFEVIECDGHDPAAI 214 >gi|284035896|ref|YP_003385826.1| transketolase [Spirosoma linguale DSM 74] gi|283815189|gb|ADB37027.1| Transketolase domain protein [Spirosoma linguale DSM 74] Length = 285 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ +G A++ K V GDG +GQ++E+ A L N+ +I+ Sbjct: 123 GSLGQGLSVASGAAYSKKLNGDKSHVYVLMGDGEQQEGQIWEAAQFAPNKKLGNLTAIID 182 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + + ++ + + + +F +++G DI V T+ KA Sbjct: 183 LNHAQIDGTTDNVNSNRDLAAKYRAFGWFVDEMEGNDIEDVIRTLKKA 230 >gi|188527167|ref|YP_001909854.1| transketolase [Helicobacter pylori Shi470] gi|188143407|gb|ACD47824.1| transketolase [Helicobacter pylori Shi470] Length = 641 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLC-GDGDLQEGISYESASLAGHLNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + VI ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEA 233 >gi|119718441|ref|YP_925406.1| transketolase subunit A [Nocardioides sp. JS614] gi|119539102|gb|ABL83719.1| transketolase subunit A [Nocardioides sp. JS614] Length = 270 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 1/97 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ TG+A+ + + DG ++G +E+ A L N++ VI+ Sbjct: 115 GSLGHGLSIATGMAWRARSTGATWRAYALLSDGECDEGSTWEAALFAGHHGLSNLVAVID 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 N+Y + F+ + V+F ++VDG D Sbjct: 175 YNKYQSLATTDETLTLEPFADKWVAFGWDVVEVDGHD 211 >gi|269138335|ref|YP_003295035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Edwardsiella tarda EIB202] gi|267983995|gb|ACY83824.1| 1-deoxy-D-xylulose-5-phosphate synthase [Edwardsiella tarda EIB202] gi|304558367|gb|ADM41031.1| 1-deoxy-D-xylulose 5-phosphate synthase [Edwardsiella tarda FL6-60] Length = 621 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 58/218 (26%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ I+ + KGG +H F ++ GH LG +A + Sbjct: 88 LTGRRDRIATIRQKGG-LHPFPWRDESEYDVLSVGHSSTSISAGLGMAVAAEREGLSRRT 146 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS---AQTNFSKR 238 +CV+ GDGA G +E+ N A +++ V+ +N+ ++ +V + AQ K Sbjct: 147 VCVI--GDGAMTAGMAFEAMNHAGDIKADMLVVLNDNEMSISENVGALNNHLAQLLSGKL 204 Query: 239 GVSFN----------------------------IPGM-----------QVDGMDIRAVKA 259 S +PG VDG D++A+ A Sbjct: 205 YASLREGGKKVLSGLPPIKELVKRTEEHLKGMVVPGTLFEELGFNYIGPVDGHDVQALVA 264 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 T+ R KGP ++ ++T + +G++ + DP ++ Sbjct: 265 TLKN----MRGLKGPQLLHIMTKKGKGYAPAEKDPISW 298 >gi|182415997|ref|YP_001821063.1| 2-oxoglutarate dehydrogenase, E1 subunit [Opitutus terrae PB90-1] gi|177843211|gb|ACB77463.1| 2-oxoglutarate dehydrogenase, E1 subunit [Opitutus terrae PB90-1] Length = 920 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 10/129 (7%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + + GD A A QG V E+ N + L ++++ NNQ T A + Sbjct: 325 RQRVLPFLIHGDAAFAGQGIVAETLNFSQLPGYTTGGTVHLVINNQIGFTTLPHEARSTR 384 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-- 291 + P V+G D AV A+ + + ++I+M+ YR GH+ +D Sbjct: 385 YCTDVAKMVEAPIFHVNGDDAEAVCLVAQLALEFRVRFQRDVVIDMVCYRKHGHNEADEP 444 Query: 292 ----PANYR 296 P YR Sbjct: 445 AFTQPVLYR 453 >gi|163797802|ref|ZP_02191748.1| deoxyxylulose-5-phosphate synthase [alpha proteobacterium BAL199] gi|159176924|gb|EDP61490.1| deoxyxylulose-5-phosphate synthase [alpha proteobacterium BAL199] Length = 638 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 11/156 (7%) Query: 140 KGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 +GG + F+ + + F H +S G G+A A + V GDGA + Sbjct: 98 QGGGLSGFTRRSESEYDPFGAAHS--STSISAGLGMAVARDLKGERFNVVAVIGDGAMSA 155 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA---QTNFSKRGVSFNIPGMQVDG 251 G YE+ N A + +I ++ +N ++ V SA Q S+ S QV Sbjct: 156 GMAYEAMNNAGSMDSRLIVILNDNDMSIAPPVGAMSAYLSQIVSSRSYRSLRHMAKQVAQ 215 Query: 252 MDIRAVKATMDKAVAYCRAH-KGPIIIEMLTYRYRG 286 +A++ T +A + R G + E L + Y G Sbjct: 216 HLPKAIERTAKRAEEFARGMVTGGTLFEELGFLYVG 251 >gi|154250347|ref|YP_001411172.1| transketolase [Fervidobacterium nodosum Rt17-B1] gi|154154283|gb|ABS61515.1| Transketolase domain protein [Fervidobacterium nodosum Rt17-B1] Length = 623 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 31/58 (53%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G +G +S G G A A KY+ D V DG + +GQV E+ A +NL+ + V+ Sbjct: 116 GNLGQGLSAGVGFALAAKYKNKDYHVFVVMSDGESAKGQVQEARRTARKYNLDNLTVM 173 >gi|45358678|ref|NP_988235.1| transketolase, N terminal half [Methanococcus maripaludis S2] gi|45047544|emb|CAF30671.1| Transketolase, N terminal half [Methanococcus maripaludis S2] Length = 275 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S G+A K + + V GDG +GQV+E+ AA + L N+I ++ Sbjct: 120 GSLGQGFSSSVGVAIGCKLNKYENNVFVLLGDGECQEGQVWEAAMAAAHYKLDNLIGFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N+ + + + +F ++DG + + T + A Sbjct: 180 RNKLQIDGCTEDVMCLMDLKAKFSAFGFDVFEIDGHNFEEIVKTAELA 227 >gi|238786905|ref|ZP_04630706.1| Transketolase subunit A [Yersinia frederiksenii ATCC 33641] gi|238725273|gb|EEQ16912.1| Transketolase subunit A [Yersinia frederiksenii ATCC 33641] Length = 276 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 1/115 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K S + V GDG +G +E+ +AA + L N+I + + Sbjct: 121 GALGHGLPVAVGIALAAKRANSKRRVFVLTGDGELAEGSNWEAALVAAHYQLDNLIIIND 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 N+ + + + + ++F + + G ++++V T++ + H Sbjct: 181 KNKLQLAGTTKSIMNTDPLADKWLAFGLQVTECQGNNMQSVVDTLEALQPKGKPH 235 >gi|71900680|ref|ZP_00682804.1| Dehydrogenase, E1 component [Xylella fastidiosa Ann-1] gi|71729559|gb|EAO31666.1| Dehydrogenase, E1 component [Xylella fastidiosa Ann-1] Length = 963 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 11/131 (8%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E ++ V ++VI NNQ TS + T Sbjct: 369 RKTVLPILIHGDAAFAGQGVVMELLQMSQARGFAVGGTLHVIINNQIGFTTSARDDARST 428 Query: 234 NF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 + + P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 429 PYCTDVAKMIGAPVFHVNGDDPDAVVFVAQLAYEFRQQFKKDVVIDLVCYRRWGHNEADE 488 Query: 292 -----PANYRT 297 P Y+T Sbjct: 489 PAATQPVMYQT 499 >gi|94968585|ref|YP_590633.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Candidatus Koribacter versatilis Ellin345] gi|94550635|gb|ABF40559.1| pyruvate dehydrogenase complex E1 component, alpha subunit [Candidatus Koribacter versatilis Ellin345] Length = 249 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 5/100 (5%) Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 V+ F A + + AA L ++ V+++N + T + ++ + + Sbjct: 118 LVLAFAGEADSLMDARATLTFAATHKLPLVVVVQHNLARLKTG-----SPSDLTHEILGL 172 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + GM VDG D AV +A+ R GP +IE TY Sbjct: 173 GLAGMTVDGSDAMAVYRVAQEAMFRARHDAGPTLIECKTY 212 >gi|28198666|ref|NP_778980.1| alpha-ketoglutarate decarboxylase [Xylella fastidiosa Temecula1] gi|28056757|gb|AAO28629.1| oxoglutarate dehydrogenase [Xylella fastidiosa Temecula1] gi|307579803|gb|ADN63772.1| 2-oxoglutarate dehydrogenase E1 component [Xylella fastidiosa subsp. fastidiosa GB514] Length = 938 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 11/131 (8%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E ++ V ++VI NNQ TS + T Sbjct: 344 RKTVLPILIHGDAAFAGQGVVMELLQMSQARGFAVGGTLHVIINNQIGFTTSARDDARST 403 Query: 234 NF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 + + P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 404 PYCTDVAKMIGAPVFHVNGDDPDAVVFVAQLAYEFRQQFKKDVVIDLVCYRRWGHNEADE 463 Query: 292 -----PANYRT 297 P Y+T Sbjct: 464 PAATQPVMYQT 474 >gi|300690861|ref|YP_003751856.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein, thiamin-binding [Ralstonia solanacearum PSI07] gi|299077921|emb|CBJ50560.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein, thiamin-binding [Ralstonia solanacearum PSI07] Length = 636 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 9/105 (8%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+G ++ + G S + F H +S G+A K + +++ Sbjct: 83 LTGRRGQMATLRQLDGISGFPRRSESPYDTFGTAHS--STSISAALGMALGAKTQGENRV 140 Query: 183 CVVCFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAMGTSV 226 + GDGA + G +E+ N A ++ NL ++ V+ +N ++ V Sbjct: 141 AIAVIGDGAMSAGMAFEAMNNAGVYRNLPLVVVLNDNDMSISPPV 185 >gi|290474685|ref|YP_003467565.1| 1-deoxy-D-xylulose 5-phosphate synthase flavoprotein [Xenorhabdus bovienii SS-2004] gi|289173998|emb|CBJ80785.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein, thiamin-binding [Xenorhabdus bovienii SS-2004] Length = 621 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 58/219 (26%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ I+ + K G +H F S + GH +S G G+A A K+ + Sbjct: 88 LTGRRDHINTIRQKNG-LHPFPWRDESEYDTLCVGHS--STSISAGLGMAIAAKHEDKGR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ--------- 232 V GDGA G +E+ N A + +++ ++ +N+ ++ +V + Sbjct: 145 KTVCVIGDGAITAGMAFEAMNHAGDIDPDMLVILNDNEMSISENVGALNNHLAHLLSGKL 204 Query: 233 -TNFSKRG--VSFNIPGMQ------------------------------VDGMDIRAVKA 259 T + G V N+P ++ VDG D+ A+ Sbjct: 205 YTTLREGGKKVFSNLPPIKELLKKTEEHLKGMVVPGTLFEELGFNYIGPVDGHDVLALTQ 264 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYR 296 T+ R KGP + ++T + RG++ + DP + Sbjct: 265 TLKN----MRELKGPQFLHIMTKKGRGYAPAEKDPIGWH 299 >gi|162146073|ref|YP_001600531.1| transketolase [Gluconacetobacter diazotrophicus PAl 5] gi|161784647|emb|CAP54184.1| putative transketolase [Gluconacetobacter diazotrophicus PAl 5] Length = 688 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NV 211 F G +G +S+ G+A A + DK GDG + +GQ++E+ + A L NV Sbjct: 149 FDAATGSLGQGLSVAAGLAAAARLDGIDKTIYCIIGDGESREGQIWEAMDFIADHGLTNV 208 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 + + N A VS A + + +F + +DG D Sbjct: 209 VAIFNCNTLAQSDYVSPAQDWVHLQHKAEAFGWTALAIDGHD 250 >gi|94496312|ref|ZP_01302889.1| deoxyxylulose-5-phosphate synthase [Sphingomonas sp. SKA58] gi|94424058|gb|EAT09082.1| deoxyxylulose-5-phosphate synthase [Sphingomonas sp. SKA58] Length = 639 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +GG + F+ + + F H +S G A ANK + Sbjct: 87 LTGRRDRIRTLRQGGGLSGFTRRAESDYDPFGAAHS--STSISAALGFAIANKMQDKPGK 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDGA + G YE+ N A ++ ++ +N ++ V SA Sbjct: 145 AIAVIGDGAMSAGMAYEAMNNARDAGNRLVVILNDNDMSIAPPVGGLSA 193 >gi|299133455|ref|ZP_07026649.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2] gi|298591291|gb|EFI51492.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2] Length = 638 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 12/131 (9%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY--- 220 +S G G+A A ++ + GDGA + G YE+ N A + +I ++ +N+ Sbjct: 124 ISAGLGMAVARDLSGANNNVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNEMSIA 183 Query: 221 ----AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH-KGPI 275 AM + +SR ++ + S G QV + V+ +A Y R G Sbjct: 184 PPVGAMSSYLSRLTSSNTYR----SLREIGKQVAKRLPKFVEKGAQRAEEYARGMLSGGT 239 Query: 276 IIEMLTYRYRG 286 + E L + Y G Sbjct: 240 LFEELGFYYVG 250 >gi|295132291|ref|YP_003582967.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zunongwangia profunda SM-A87] gi|294980306|gb|ADF50771.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zunongwangia profunda SM-A87] Length = 588 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 23/170 (13%) Query: 130 TGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS-DKICVVCF 187 T RQ GGIS G S + F GH +S G+A A++ + DK + Sbjct: 92 TNRQLGGIS---GFPKREESVYDAFGVGHS--STSISAALGMALASRLKGDLDKQHIAVI 146 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG-------- 239 GD + G +E N A + N N++ ++ +N + SV +K G Sbjct: 147 GDASIASGMAFEGLNHAGVTNANLLVILNDNAIGIDPSVGALKEYLTKAKVGYKPKESNI 206 Query: 240 ---VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ++F G +DG D+ + + + + KGP + ++T + +G Sbjct: 207 IEALNFRYFG-PIDGHDLEGLVSILKE----LNEIKGPKFLHVITKKGKG 251 >gi|239814578|ref|YP_002943488.1| 1-deoxy-D-xylulose-5-phosphate synthase [Variovorax paradoxus S110] gi|239801155|gb|ACS18222.1| deoxyxylulose-5-phosphate synthase [Variovorax paradoxus S110] Length = 632 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 32/63 (50%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G+A A K + D+ V GDGA G +E+ N A + + ++ ++ +N ++ Sbjct: 135 ISAALGMAMAAKQKGEDRHSVAIIGDGALTAGMAFEALNNAGVCDCKLLVILNDNDMSIS 194 Query: 224 TSV 226 V Sbjct: 195 PPV 197 >gi|195494604|ref|XP_002094909.1| GE22080 [Drosophila yakuba] gi|194181010|gb|EDW94621.1| GE22080 [Drosophila yakuba] Length = 623 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 4/109 (3%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 G +G +S+ G+A+ KY ++D V GDG A +G V+ES + A + L+ + VI Sbjct: 122 GSLGQGISVAAGMAYVGKYLDKADYRTYVIVGDGEATEGAVWESLHFAGHYCLDNLCVIF 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI-RAVKATMDKA 264 + + + + + +R +F + ++G DI VKA + A Sbjct: 182 DMNKIFCSDI--GTEMEVYRERLDAFGFNALVLNGHDIDELVKAFFNAA 228 >gi|182681356|ref|YP_001829516.1| 2-oxoglutarate dehydrogenase E1 component [Xylella fastidiosa M23] gi|182631466|gb|ACB92242.1| 2-oxoglutarate dehydrogenase, E1 subunit [Xylella fastidiosa M23] Length = 963 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 11/131 (8%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E ++ V ++VI NNQ TS + T Sbjct: 369 RKTVLPILIHGDAAFAGQGVVMELLQMSQARGFAVGGTLHVIINNQIGFTTSARDDARST 428 Query: 234 NF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 + + P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 429 PYCTDVAKMIGAPVFHVNGDDPDAVVFVAQLAYEFRQQFKKDVVIDLVCYRRWGHNEADE 488 Query: 292 -----PANYRT 297 P Y+T Sbjct: 489 PAATQPVMYQT 499 >gi|187736180|ref|YP_001878292.1| 2-oxoglutarate dehydrogenase, E1 subunit [Akkermansia muciniphila ATCC BAA-835] gi|187426232|gb|ACD05511.1| 2-oxoglutarate dehydrogenase, E1 subunit [Akkermansia muciniphila ATCC BAA-835] Length = 921 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 4/122 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + +V GD A + QG V E N++ L ++++ NNQ TS A + Sbjct: 331 RKRVLPLVLHGDAAFSGQGIVAEVLNLSLLKGYRTGGTVHLVINNQIGFTTSPDEARSSR 390 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + P + ++G + D A+ + + II++M YR GH+ +D A Sbjct: 391 YATDVAQMLQSPILHINGESPEDLVWAADFALQFRQEFGRDIILDMYCYRRLGHNETDQA 450 Query: 294 NY 295 + Sbjct: 451 AF 452 >gi|116748742|ref|YP_845429.1| transketolase [Syntrophobacter fumaroxidans MPOB] gi|116697806|gb|ABK16994.1| Transketolase domain protein [Syntrophobacter fumaroxidans MPOB] Length = 653 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S+G G+A K R S V GDG +GQ+ E+ A + LN + VI+ Sbjct: 127 GNLGQGLSVGAGMALGLKLRGSRASTFVLMGDGEQQKGQIAEARRFAVKYELNDLCCVID 186 Query: 217 NNQYAMG 223 N +G Sbjct: 187 RNHLQIG 193 >gi|270296445|ref|ZP_06202645.1| transketolase central region [Bacteroides sp. D20] gi|270273849|gb|EFA19711.1| transketolase central region [Bacteroides sp. D20] Length = 274 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 1/98 (1%) Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTS 225 G+A A + + V GDG ++G V+ES A + L N+I +++ N Y + Sbjct: 126 AVGVALAMQKKHQSNKVYVLLGDGECDEGIVWESLMSIANFKLNNLIIIVDRNGYQLDGP 185 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 Q + ++ SF + V+G I + ++K Sbjct: 186 TKEIMNQYSLEEKFKSFGLEVEVVNGHSIEELLCVLNK 223 >gi|150398322|ref|YP_001328789.1| transketolase domain-containing protein [Sinorhizobium medicae WSM419] gi|150029837|gb|ABR61954.1| Transketolase domain protein [Sinorhizobium medicae WSM419] Length = 281 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 1/107 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K R+ GDG +G +E+ + AA + L N+ +I+ Sbjct: 127 GPLGHGLPVAVGMAKAAKLTRAKYHTYALTGDGEMQEGSNWEAISSAAQFGLDNLTLIID 186 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 +N++ G ++ + F + +F +++G + V ++K Sbjct: 187 HNRFQQGAALKDTNNLAPFPAKLEAFGWDVTEINGNAMDEVVPALEK 233 >gi|9106591|gb|AAF84359.1|AE003984_10 oxoglutarate dehydrogenase [Xylella fastidiosa 9a5c] Length = 967 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 11/131 (8%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E ++ V ++VI NNQ TS + T Sbjct: 373 RKTVLPILIHGDAAFAGQGVVMELLQMSQARGFAVGGTLHVIINNQIGFTTSARDDARST 432 Query: 234 NF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 + + P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 433 PYCTDVAKMIGAPVFHVNGDDPDAVVFVAQLAYEFRQQFKKDVVIDLVCYRRWGHNEADE 492 Query: 292 -----PANYRT 297 P Y+T Sbjct: 493 PAATQPVMYQT 503 >gi|329768597|ref|ZP_08260083.1| hypothetical protein HMPREF0428_01780 [Gemella haemolysans M341] gi|328836471|gb|EGF86132.1| hypothetical protein HMPREF0428_01780 [Gemella haemolysans M341] Length = 585 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 8/100 (8%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGRQ K G + S + F GH +SL +G+ A + Sbjct: 80 LTGRQKAFMDPKHYDDVSGYTNPKESEHDLFTMGH--TSTSLSLASGVLHARDLKNEKSN 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 V GDGA + G YE N A N I +I +N ++ Sbjct: 138 VVAIIGDGALSGGMAYEGLNTIATLGTNAIIIINDNDQSI 177 >gi|255655212|ref|ZP_05400621.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium difficile QCD-23m63] gi|296451197|ref|ZP_06892938.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium difficile NAP08] gi|296880451|ref|ZP_06904413.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium difficile NAP07] gi|296260018|gb|EFH06872.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium difficile NAP08] gi|296428405|gb|EFH14290.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium difficile NAP07] Length = 621 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +S+ TGIA A ++ + + GDG+ G E+ N N N+I Sbjct: 112 FDTGHS--STSISIATGIACARDIKKENYSVISVIGDGSITGGMALEALNQLGYINTNMI 169 Query: 213 YVIENNQYAMGTSV 226 ++ +N+ ++ +V Sbjct: 170 VILNDNEMSIDKNV 183 >gi|223649194|gb|ACN11355.1| Transketolase [Salmo salar] Length = 628 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 2/108 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ + A+ + L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYNVYCLLGDGEMSEGSVWEAMSFASYYQLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 + N+ + KR +F + VDG + + + + Sbjct: 183 DINRLGQSDPAPLQHHVDKYQKRCEAFGWNAIIVDGHSVEELTKVLSQ 230 >gi|152979790|ref|YP_001352021.1| 1-deoxy-D-xylulose-5-phosphate synthase [Janthinobacterium sp. Marseille] gi|151279867|gb|ABR88277.1| 1-deoxy-D-xylulose-5-phosphate synthase [Janthinobacterium sp. Marseille] Length = 621 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAM 222 +S G+A A K + D+ + GDGA G +E+ N A + ++N++ V+ +N ++ Sbjct: 120 ISAALGMALAAKTKGEDRHAIAVIGDGAMTAGMAFEAMNNAGIHDDINLLVVLNDNDMSI 179 Query: 223 GTSV 226 V Sbjct: 180 SPPV 183 >gi|103487835|ref|YP_617396.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingopyxis alaskensis RB2256] gi|118595621|sp|Q1GQK9|DXS_SPHAL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|98977912|gb|ABF54063.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Sphingopyxis alaskensis RB2256] Length = 642 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 +TGR+ I + +GG + F+ + + F H +S G A ANK + Sbjct: 87 ITGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHS--STSISAALGFAIANKLKDEPGR 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A +I ++ +N ++ V SA Sbjct: 145 AIAVIGDGSMSAGMAYEAMNNAKQAGNRLIVILNDNDMSIAPPVGGLSA 193 >gi|293392565|ref|ZP_06636885.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia odorifera DSM 4582] gi|291424967|gb|EFE98176.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia odorifera DSM 4582] Length = 621 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 64/221 (28%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ IS + K G +H F S + GH LG +A A + + Sbjct: 88 LTGRRDRISTIRQKNG-LHPFPWRAESEYDVLSVGHSSTSISAGLGMAVAAAREGKGRRT 146 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS---AQ------ 232 +CV+ GDGA G +E+ N A + +++ V+ +N+ ++ +V + AQ Sbjct: 147 VCVI--GDGAITAGMAFEAMNHAGDIDPDMLVVLNDNEMSISENVGALNNHLAQLLSGKL 204 Query: 233 ------------------------------------TNFSKRGVSFNIPGMQVDGMDIRA 256 T F + G ++ P VDG D++ Sbjct: 205 YSTLREGGKKVLSGLPPIKELIKRTEEHLKGMVVPGTLFEELGFNYIGP---VDGHDVQG 261 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 + AT+ R KGP ++ ++T + RG++ + DP ++ Sbjct: 262 LVATLKN----MRDLKGPQLLHIMTKKGRGYAPAEKDPISF 298 >gi|257468687|ref|ZP_05632781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fusobacterium ulcerans ATCC 49185] gi|317062942|ref|ZP_07927427.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] gi|313688618|gb|EFS25453.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] Length = 584 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 11/161 (6%) Query: 66 EEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMI--TAYREHGHILACGVDA 122 E +A L + GG +G I+ M D+ + +++ + H + G Sbjct: 26 EMRAALLNRLSKTGGHIGPNLGMVEAIIAMHYVFNSPVDKFVFDVSHQSYPHKMLTGRKD 85 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 + + E G + + MF+ GH VSL +G+A A + ++ Sbjct: 86 AYLYEEHFHDVSGYTNPEESEHDMFNV------GH--TSTSVSLASGLAKARDLKNDNEN 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V GDG+ + G+ E + A N N I V+ +N ++ Sbjct: 138 IVAVIGDGSLSGGEALEGLDFAGDLNSNFIVVVNDNDMSIA 178 >gi|281183037|ref|NP_001162270.1| transketolase-like protein 1 [Papio anubis] gi|160213456|gb|ABX10984.1| transketolase-like 1 (predicted) [Papio anubis] Length = 596 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 94 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 153 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 154 DVNRLGHSGALPAEHCIDIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 210 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 211 AVVAKTFKGRG 221 >gi|77747553|ref|NP_298839.2| 2-oxoglutarate dehydrogenase E1 component [Xylella fastidiosa 9a5c] Length = 942 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 11/131 (8%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E ++ V ++VI NNQ TS + T Sbjct: 348 RKTVLPILIHGDAAFAGQGVVMELLQMSQARGFAVGGTLHVIINNQIGFTTSARDDARST 407 Query: 234 NF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 + + P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 408 PYCTDVAKMIGAPVFHVNGDDPDAVVFVAQLAYEFRQQFKKDVVIDLVCYRRWGHNEADE 467 Query: 292 -----PANYRT 297 P Y+T Sbjct: 468 PAATQPVMYQT 478 >gi|260062385|ref|YP_003195465.1| transketolase, N-terminal subunit [Robiginitalea biformata HTCC2501] gi|88783948|gb|EAR15119.1| transketolase, N-terminal subunit [Robiginitalea biformata HTCC2501] Length = 281 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 5/127 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G A A K + + + GDG +GQ +E+ A + N+I I+ Sbjct: 118 GSLGQGMSVAIGAALAKKLNKDNHLVYSLHGDGELQEGQNWEAIMYAGSKGVDNLISTID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKG-P 274 N + + S + +F +++ +G D+ AV AT+ +A + R KG P Sbjct: 178 RNGQQIDGPTEEVMPLGDVSVKLEAFGWEVLELPEGNDLEAVLATLKEAKS--RTGKGKP 235 Query: 275 IIIEMLT 281 + I M T Sbjct: 236 VAIVMDT 242 >gi|320537521|ref|ZP_08037464.1| transketolase, thiamine diphosphate binding domain protein [Treponema phagedenis F0421] gi|320145630|gb|EFW37303.1| transketolase, thiamine diphosphate binding domain protein [Treponema phagedenis F0421] Length = 280 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 4/122 (3%) Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFA-NKYRRSDKICVVCFGDGAANQGQVYESFNI 203 H T G G +G +S G AFA NK ++ V+ GDG +GQ +E+ + Sbjct: 105 HPIKTIPGIEMSSGSLGQGISFALGKAFALNKQNLKARVFVLA-GDGEMQEGQNWEALLL 163 Query: 204 AALWNLNVIYV-IENNQYAMGTSVSR-ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 AA LN + V I+NN+ + ++ ++ NF + F + VDG D+ A+ + Sbjct: 164 AAKLKLNNLTVIIDNNKLQLDNTIEDILNSDKNFQAQIREFGLETFAVDGHDVSALAELL 223 Query: 262 DK 263 +K Sbjct: 224 EK 225 >gi|90579834|ref|ZP_01235642.1| 1-deoxy-D-xylulose-5-phosphate synthase [Vibrio angustum S14] gi|90438719|gb|EAS63902.1| 1-deoxy-D-xylulose-5-phosphate synthase [Vibrio angustum S14] Length = 621 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 60/220 (27%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ ++ + KGG +H F S + GH +S G G+A A + ++ Sbjct: 88 LTGRRDDMATIRQKGG-LHPFPWRGESEYDTLSVGHS--STSISAGLGLAIAAEKEGLNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV--------------- 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 145 KVVSIIGDGAITAGMAFEAMNHAGDVHSDMLVILNDNEMSISENVGALNNHLAHLLSGNF 204 Query: 227 ------------SRASAQTNFSKRG----------------VSFNIPGMQVDGMDIRAVK 258 S A KR + FN G VDG D+ + Sbjct: 205 YTSIREGGKKVLSNAPPIKEMVKRAEEHIKGMVVPSTMFEELGFNYIG-PVDGHDVHELV 263 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYR 296 T+ R KGP + ++T + +G++ +DP NY Sbjct: 264 KTLKN----MRNLKGPQFLHIMTKKGKGYAPAEADPINYH 299 >gi|148263091|ref|YP_001229797.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter uraniireducens Rf4] gi|146396591|gb|ABQ25224.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter uraniireducens Rf4] Length = 637 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A+ + + GDG+ G +E+ N A Sbjct: 107 SMHDAFGAGHS--STSISAGLGMAVAHGLKEEASKVIAVIGDGSLTGGIAFEALNQAGHL 164 Query: 208 NLNVIYVIENNQYAMGTSVSRAS 230 + N+I V+ +N+ ++ +V S Sbjct: 165 HKNLIVVLNDNEMSISKNVGALS 187 >gi|67920284|ref|ZP_00513804.1| Deoxyxylulose-5-phosphate synthase [Crocosphaera watsonii WH 8501] gi|67857768|gb|EAM53007.1| Deoxyxylulose-5-phosphate synthase [Crocosphaera watsonii WH 8501] Length = 636 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 17/131 (12%) Query: 120 VDASKIMAELTGRQGGISKGKGGSMHMFST---KNGFYG------------GHGIVGAQV 164 +D K++ ++ G Q K G H F T K+G G G G + Sbjct: 61 LDRDKVIWDV-GHQAYPHKMLTGRYHDFHTLRQKDGIAGYLKRCESKFDHFGAGHASTSI 119 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMG 223 S G G+A A + D V GDGA G E+ N A L + N++ V+ +N+ ++ Sbjct: 120 SAGLGMALARDAKGEDYKVVSIIGDGALTGGMALEAINHAGHLPHTNLMVVLNDNEMSIS 179 Query: 224 TSVSRASAQTN 234 +V S N Sbjct: 180 PNVGAISRYLN 190 >gi|255534655|ref|YP_003095026.1| Transketolase, N-terminal section [Flavobacteriaceae bacterium 3519-10] gi|255340851|gb|ACU06964.1| Transketolase, N-terminal section [Flavobacteriaceae bacterium 3519-10] Length = 312 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 8/125 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G A A K D + GDG +GQV+E+ AA + N+I I+ Sbjct: 148 GSLGQGLSVAIGAALAKKMDGDDALVYTLHGDGELQEGQVWEALMFAAHNKVDNLIATID 207 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV----DGMDIRAVKATMDKAVAYCRAHK 272 N + V + + + +F G +V +G D+ V A +++A A K Sbjct: 208 YNNRQIDGDVDDVLSLGDLHAKLEAF---GWKVINEKNGNDLETVIAILERAKAETGNGK 264 Query: 273 GPIII 277 +II Sbjct: 265 PVVII 269 >gi|238855177|ref|ZP_04645498.1| 1-deoxy-d-xylulose-5-phosphate synthase 2 [Lactobacillus jensenii 269-3] gi|260664508|ref|ZP_05865360.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus jensenii SJ-7A-US] gi|282934323|ref|ZP_06339593.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Lactobacillus jensenii 208-1] gi|313472047|ref|ZP_07812539.1| deoxyxylulose-5-phosphate synthase [Lactobacillus jensenii 1153] gi|238832206|gb|EEQ24522.1| 1-deoxy-d-xylulose-5-phosphate synthase 2 [Lactobacillus jensenii 269-3] gi|239530076|gb|EEQ69077.1| deoxyxylulose-5-phosphate synthase [Lactobacillus jensenii 1153] gi|260561573|gb|EEX27545.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus jensenii SJ-7A-US] gi|281301607|gb|EFA93881.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Lactobacillus jensenii 208-1] Length = 580 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 22/158 (13%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G ++L TG+A A + + GDG+ G YE N AA+ N++ Sbjct: 115 YYAVGHTSTSIALATGMARARDLMGGKENIMALIGDGSMTGGLAYEGLNNAAIEKHNLVV 174 Query: 214 VIENNQYAMGTSV-------------SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 V+ +NQ ++ +V + + + F+ G + DG DI + A Sbjct: 175 VVNDNQMSIDDNVGGLVTALKKLRDSNGQTPENPFTAMGFDYR---YVADGNDIEDMIA- 230 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGH--SMSDPANYR 296 A + PI++ + T + +G+ ++ D AN+ Sbjct: 231 ---AFEAVKDVDHPILLHINTLKGKGYEPAIKDEANHH 265 >gi|114690646|ref|XP_001139863.1| PREDICTED: hypothetical protein LOC465937 isoform 2 [Pan troglodytes] Length = 599 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 94 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 153 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 154 DVNRLGHSGALHAEHCIDIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 210 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 211 AVVAKTFKGRG 221 >gi|71274692|ref|ZP_00650980.1| Dehydrogenase, E1 component [Xylella fastidiosa Dixon] gi|71900958|ref|ZP_00683071.1| Dehydrogenase, E1 component [Xylella fastidiosa Ann-1] gi|170730071|ref|YP_001775504.1| 2-oxoglutarate dehydrogenase E1 component [Xylella fastidiosa M12] gi|71164424|gb|EAO14138.1| Dehydrogenase, E1 component [Xylella fastidiosa Dixon] gi|71729263|gb|EAO31381.1| Dehydrogenase, E1 component [Xylella fastidiosa Ann-1] gi|167964864|gb|ACA11874.1| Oxoglutarate dehydrogenase (succinyl-transferring) [Xylella fastidiosa M12] Length = 963 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 11/131 (8%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A A QG V E ++ V ++VI NNQ TS + T Sbjct: 369 RKTVLPILIHGDAAFAGQGVVMELLQMSQARGFAVGGTLHVIINNQIGFTTSARDDARST 428 Query: 234 NF-SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 + + P V+G D AV A + + K ++I+++ YR GH+ +D Sbjct: 429 PYCTDVAKMIGAPVFHVNGDDPDAVVFVAQLAYEFRQQFKKDVVIDLVCYRRWGHNEADE 488 Query: 292 -----PANYRT 297 P Y+T Sbjct: 489 PAATQPVMYQT 499 >gi|317180743|dbj|BAJ58529.1| transketolase [Helicobacter pylori F32] Length = 641 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLC-GDGDLQEGISYESTSLAGHLNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + VI ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEA 233 >gi|213422125|ref|ZP_03355191.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 265 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 7/112 (6%) Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKIC-----VVCF-GDGAANQGQVYESFNIAALWNLN 210 HG+ SLG GI+ A S K+ V C GDG N+GQ +E+F A LN Sbjct: 108 HGVDATTGSLGQGISIAGGMALSHKLARRPNRVFCIVGDGELNEGQCWEAFQFIAHHRLN 167 Query: 211 VIYV-IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 + V I+ N+ + + + + +F + V G DI + A + Sbjct: 168 NLTVFIDWNKQQLDGELEEIINPFDLEGKFRAFGFDVVTVKGDDIAGLLAVV 219 >gi|189023160|ref|YP_001932901.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella abortus S19] gi|254690606|ref|ZP_05153860.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella abortus bv. 6 str. 870] gi|254699198|ref|ZP_05161026.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella abortus bv. 2 str. 86/8/59] gi|254732643|ref|ZP_05191221.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella abortus bv. 4 str. 292] gi|256255786|ref|ZP_05461322.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella abortus bv. 9 str. C68] gi|189021734|gb|ACD74455.1| 2-oxoisovalerate dehydrogenase beta subunit [Brucella abortus S19] Length = 80 Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 21/41 (51%), Positives = 22/41 (53%) Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 L Y M LIRRFEEK G+V G H IGQEA V Sbjct: 32 LKWYSQMKLIRRFEEKILDFKKAGLVHGPAHASIGQEAAAV 72 >gi|162952052|ref|NP_001106151.1| transketolase [Sus scrofa] gi|159502444|gb|ABW97521.1| transketolase [Sus scrofa] Length = 623 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A ++ L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGAVWEAMAFAGIYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ + P Sbjct: 183 DINRLGQSDPAPLQHQMDVYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQVKNQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ RG Sbjct: 237 AIIAKTFKGRG 247 >gi|17546940|ref|NP_520342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia solanacearum GMI1000] gi|21263512|sp|Q8XX95|DXS_RALSO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|17429240|emb|CAD15928.1| probable 1-deoxy-d-xylulose-5-phosphate synthase (1-deoxyxylulose-5-phosphate synthase) (dxp synthase) (dxps) protein [Ralstonia solanacearum GMI1000] Length = 636 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAM 222 +S G+A K + +++ + GDGA + G +E+ N A ++ NL ++ V+ +N ++ Sbjct: 122 ISAALGMALGAKTQGENRVAIAVIGDGAMSAGMAFEAMNNAGVYRNLPLVVVLNDNDMSI 181 Query: 223 GTSV 226 V Sbjct: 182 SPPV 185 >gi|238784103|ref|ZP_04628117.1| Transketolase subunit A [Yersinia bercovieri ATCC 43970] gi|238714949|gb|EEQ06947.1| Transketolase subunit A [Yersinia bercovieri ATCC 43970] Length = 276 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K S + V GDG +G +E+ +AA + L N+I + + Sbjct: 121 GALGHGLPVAVGIALAAKRANSKRRVFVLTGDGELAEGSNWEAALVAAHYQLDNLIIIND 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N+ + + + + +F + + G D+++V T++ Sbjct: 181 KNKLQLAGTTKSIMNTDPLADKWQAFGLQVTECRGNDMQSVVETLE 226 >gi|304383527|ref|ZP_07365987.1| transketolase [Prevotella marshii DSM 16973] gi|304335337|gb|EFM01607.1| transketolase [Prevotella marshii DSM 16973] Length = 268 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 7/141 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A A K + + + GDG ++G V+ES +L N +++ Sbjct: 113 GSLGLGISFGMGVAHACKLKGINNRVYIIVGDGELDEGLVWESLMFGNHRSLKNTTIIVD 172 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + T ++ SF ++DG +I + + Y + GP Sbjct: 173 CNGLQIDGKTDDVMKLTPLKEKFESFGYQTTEIDGHNINQLCEAL-----YQSSLSGPCA 227 Query: 277 IEMLTYRYRGHS-MSDPANYR 296 I T + +G S M D A + Sbjct: 228 IIANTVKGKGVSFMEDNAKWH 248 >gi|194366403|ref|YP_002029013.1| 2-oxoglutarate dehydrogenase E1 component [Stenotrophomonas maltophilia R551-3] gi|194349207|gb|ACF52330.1| 2-oxoglutarate dehydrogenase, E1 subunit [Stenotrophomonas maltophilia R551-3] Length = 943 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 6/122 (4%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A + QG V E F ++ V ++++ NNQ TS + T Sbjct: 345 RKQVMPILIHGDAAFSGQGVVMELFQMSQARGFAVGGTVHIVVNNQVGFTTSNPLDTRST 404 Query: 234 NFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 ++ P + V+G D AV A + + ++I+++ YR GH+ +D Sbjct: 405 RYATDVAKMIAAPVLHVNGDDPEAVVFAAQLAFEFRQKFAKDVVIDLMCYRRWGHNEADE 464 Query: 292 PA 293 PA Sbjct: 465 PA 466 >gi|315586351|gb|ADU40732.1| transketolase [Helicobacter pylori 35A] Length = 641 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLC-GDGDLQEGISYESASLAGHLNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + VI ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEA 233 >gi|254293554|ref|YP_003059577.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hirschia baltica ATCC 49814] gi|254042085|gb|ACT58880.1| deoxyxylulose-5-phosphate synthase [Hirschia baltica ATCC 49814] Length = 642 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 7/96 (7%) Query: 140 KGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 +GG + F+ + + F H G +S G G A A + D+ V GDG+ Sbjct: 97 QGGGLSGFTKRSESEYDPFGAAH--AGTSISAGAGFATARDLKDEDRNVVCVIGDGSMTA 154 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 G YE+ N + +I ++ +N ++ V S Sbjct: 155 GMAYEAMNHMGGMHKRMIVILNDNDMSIAPPVGALS 190 >gi|227879325|ref|ZP_03997190.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus crispatus JV-V01] gi|256849110|ref|ZP_05554543.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus crispatus MV-1A-US] gi|262047590|ref|ZP_06020545.1| 1-deoxyxylulose-5-phosphate synthase [Lactobacillus crispatus MV-3A-US] gi|227861069|gb|EEJ68723.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus crispatus JV-V01] gi|256713886|gb|EEU28874.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus crispatus MV-1A-US] gi|260572166|gb|EEX28731.1| 1-deoxyxylulose-5-phosphate synthase [Lactobacillus crispatus MV-3A-US] Length = 423 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 14/140 (10%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G ++L TG+A A + + GDG+ G YE N AA+ N++ V+ + Sbjct: 111 GHTSTSIALATGMAKARDLMGKHENIMALIGDGSMTGGLAYEGLNNAAIEKHNLVVVVND 170 Query: 218 NQYAMGTSVS------RASAQTNFSKRGVSFNIPGMQ----VDGMDIRAVKATMDKAVAY 267 NQ ++ +V + +N + F G DG DI+ +M A Sbjct: 171 NQMSIDDNVGGLVTALKKLRDSNGETKENPFTAIGFDYRYVADGNDIQ----SMIDAFKA 226 Query: 268 CRAHKGPIIIEMLTYRYRGH 287 + PI++ + T + +G+ Sbjct: 227 VKNVDHPILLHINTLKGKGY 246 >gi|110835027|ref|YP_693886.1| deoxyxylulose-5-phosphate synthase [Alcanivorax borkumensis SK2] gi|118595490|sp|Q0VMI4|DXS_ALCBS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|110648138|emb|CAL17614.1| deoxyxylulose-5-phosphate synthase [Alcanivorax borkumensis SK2] Length = 645 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ ++ + G + F + + F GH +S G+A + SD+ Sbjct: 95 LTGRRESLTSIRQAGGLSGFPKRSESEYDTFGVGHS--STSISAALGMALGAEMAGSDRR 152 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA GQ +E+ + AA N++ ++ +N ++ +V Sbjct: 153 AVAIIGDGAMTAGQAFEAMSHAAHTRSNLLVILNDNNMSISHNV 196 >gi|332673206|gb|AEE70023.1| transketolase [Helicobacter pylori 83] Length = 641 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLC-GDGDLQEGISYESASLAGHLNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + VI ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFLAQNWEVLECDGHDYQAIHDALEEA 233 >gi|300715878|ref|YP_003740681.1| 2-oxoglutarate dehydrogenase E1 component [Erwinia billingiae Eb661] gi|299061714|emb|CAX58830.1| 2-oxoglutarate dehydrogenase E1 component [Erwinia billingiae Eb661] Length = 935 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 5/156 (3%) Query: 182 ICVVCFGDGAA-NQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+ N++ V + ++ NNQ TS + + T + + Sbjct: 352 LPITIHGDAAIIGQGVVQETLNMSQARGYEVGGTVRIVINNQIGFTTSNPKDARSTQYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 G P V+ D AV A+ + K + I+++ YR GH+ +D + Sbjct: 412 DIGKMVLAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSAT 471 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +++ + P + RL K AS D E+ Sbjct: 472 QPVMYQKIKKHPTPRKLYADRLESEKIASLEDATEM 507 >gi|297305081|ref|XP_001090028.2| PREDICTED: transketolase-like 1 isoform 1 [Macaca mulatta] Length = 590 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 88 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 147 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 148 DVNRLGHSGALPAEHCIDIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 204 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 205 AVVAKTFKGRG 215 >gi|261839209|gb|ACX98974.1| transketolase [Helicobacter pylori 52] Length = 639 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 118 GPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLC-GDGDLQEGISYESASLAGHLNL 176 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + VI ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 177 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEA 231 >gi|118444521|ref|YP_878056.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium novyi NT] gi|166198611|sp|A0Q0A4|DXS_CLONN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|118134977|gb|ABK62021.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium novyi NT] Length = 623 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 40/190 (21%), Positives = 69/190 (36%), Gaps = 53/190 (27%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +S G+A A + V GDGA G E+ N N+I Sbjct: 112 FETGHS--STSISAALGMARARDLKNEKCNVVAVIGDGALTGGMAIEALNDVGDKKTNLI 169 Query: 213 YVIENNQYAMG-------TSVSRASAQTNFSKRGVSFN---------------------- 243 ++ +NQ ++G T +SR ++K FN Sbjct: 170 VILNDNQMSIGKNVGGVSTYLSRIRIDPKYNKFKADFNDVLRKTNIGTGVADSLSKLKSG 229 Query: 244 -----IPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 +PGM +DG +I+ + ++ A + GP++I +T + +G+ Sbjct: 230 IKQMLVPGMFFEEMGIKYLGPIDGHNIKELTEVINTA----KNLNGPVLIHTITQKGKGY 285 Query: 288 SMS--DPANY 295 + DP + Sbjct: 286 KFAEKDPNRF 295 >gi|152979038|ref|YP_001344667.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus succinogenes 130Z] gi|150840761|gb|ABR74732.1| deoxyxylulose-5-phosphate synthase [Actinobacillus succinogenes 130Z] Length = 617 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ +S + K G +H F + + GH +S G GIA A + + + Sbjct: 83 LTGRRDKMSTIRQKDG-LHPFPWREESEFDVLTVGHS--STSISAGLGIAVAAEKENAGR 139 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 140 KTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSISKNV 184 >gi|320321851|gb|EFW77947.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. glycinea str. B076] gi|320331042|gb|EFW87016.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. glycinea str. race 4] gi|330886860|gb|EGH20295.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. mori str. 301020] gi|330984530|gb|EGH82633.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 630 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 45/230 (19%), Positives = 85/230 (36%), Gaps = 52/230 (22%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ +S + K G Y G+ +S G+A A++ + S++ + Sbjct: 95 LTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIASRLQGSERKSI 154 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV------------SRASAQ 232 GDGA G +E+ N A N++ ++ +N ++ +V SR + Sbjct: 155 AVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSISRNVGGLSNYLAKILSSRTYSS 214 Query: 233 TNFSKRGVSFNIPGM------------------------------QVDGMDIRAVKATMD 262 + V +PG +DG D+ + AT+ Sbjct: 215 MREGSKKVLSRLPGAWEIARRTEEYAKGMLVPGTLFEELGWNYIGPIDGHDLPTLIATLR 274 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDP 310 R KGP + ++T + +G + + DP Y ++ + + P Sbjct: 275 N----MRDLKGPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLNAPVAP 320 >gi|209544448|ref|YP_002276677.1| transketolase [Gluconacetobacter diazotrophicus PAl 5] gi|209532125|gb|ACI52062.1| Transketolase central region [Gluconacetobacter diazotrophicus PAl 5] Length = 662 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NV 211 F G +G +S+ G+A A + DK GDG + +GQ++E+ + A L NV Sbjct: 123 FDAATGSLGQGLSVAAGLAAAARLDGIDKTIYCIIGDGESREGQIWEAMDFIADHGLTNV 182 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 + + N A VS A + + +F + +DG D Sbjct: 183 VAIFNCNTLAQSDYVSPAQDWVHLQHKAEAFGWTALAIDGHD 224 >gi|114690638|ref|XP_001140116.1| PREDICTED: hypothetical protein LOC465937 isoform 5 [Pan troglodytes] Length = 628 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 123 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 183 DVNRLGHSGALHAEHCIDIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 239 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 240 AVVAKTFKGRG 250 >gi|308063220|gb|ADO05107.1| transketolase [Helicobacter pylori Sat464] Length = 641 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLC-GDGDLQEGISYESASLAGHLNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + VI ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEA 233 >gi|90422661|ref|YP_531031.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris BisB18] gi|118595613|sp|Q21A74|DXS_RHOPB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|90104675|gb|ABD86712.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris BisB18] Length = 641 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + GG + F+ + + F H +S G G+A A Sbjct: 87 LTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHS--STSISAGLGMAVARDLAGGKNN 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A N +I ++ +N ++ V SA Sbjct: 145 VIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSA 193 >gi|332299876|ref|YP_004441797.1| 1-deoxy-D-xylulose-5-phosphate synthase [Porphyromonas asaccharolytica DSM 20707] gi|332176939|gb|AEE12629.1| 1-deoxy-D-xylulose-5-phosphate synthase [Porphyromonas asaccharolytica DSM 20707] Length = 633 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 5/99 (5%) Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 E+ + GG+S G + S + F GH +S G+A A K ++ ++ V Sbjct: 94 EMLRQWGGLS---GFPLPSESEYDTFPAGHA--SNSISAALGMAIAAKLKQEERHVVAVI 148 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GDG+ G +E N A+ + +++ V+ +N ++ +V Sbjct: 149 GDGSMTGGLAFEGLNNASSYPNDLLVVVNDNNMSIDANV 187 >gi|326491509|dbj|BAJ94232.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326510627|dbj|BAJ87530.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 712 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 44/202 (21%), Positives = 82/202 (40%), Gaps = 27/202 (13%) Query: 23 AKRAATSSVDCVDIPF-LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF 81 ++R T +D V+ P ++ + E Q+LS E ++ ++ + GG Sbjct: 57 SQRPPTPLLDTVNYPIHMKNLSLKEL---QQLSD----------ELRSDVIFHVSKTGGH 103 Query: 82 CHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGH-ILACGVDASKIMAELTGRQGGIS 137 +G + V + T D+++ ++ + H IL D M + G G I Sbjct: 104 LGSSLGVVELTVALHYVFNTPQDKLLWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFIK 163 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 + + S + F GH +S G+A + + V GDGA GQ Sbjct: 164 RSE-------SEYDSFGTGHS--STTISAALGMAVGRDLKGAKNNVVAVIGDGAMTAGQA 214 Query: 198 YESFNIAALWNLNVIYVIENNQ 219 YE+ N A + ++I ++ +N+ Sbjct: 215 YEAMNNAGYLDSDMIVILNDNK 236 >gi|297379580|gb|ADI34467.1| transketolase [Helicobacter pylori v225d] Length = 641 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKKAISHKVYCLC-GDGDLQEGISYESASLAGHLNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + VI ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEA 233 >gi|254501985|ref|ZP_05114136.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii DFL-11] gi|222438056|gb|EEE44735.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii DFL-11] Length = 631 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 32/68 (47%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A + D + GDGA + G YE+ N A ++ ++ +N ++ Sbjct: 118 ISAGLGMAAARDLKDGDNNVIAVIGDGAMSAGMAYEAMNNAGHLGSRLVVILNDNDMSIA 177 Query: 224 TSVSRASA 231 V SA Sbjct: 178 PPVGAMSA 185 >gi|188534431|ref|YP_001908228.1| 2-oxoglutarate dehydrogenase E1 component [Erwinia tasmaniensis Et1/99] gi|188029473|emb|CAO97350.1| 2-oxoglutarate dehydrogenase E1 component [Erwinia tasmaniensis Et1/99] Length = 935 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 11/160 (6%) Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR--SDKIC-VVCFGDGAA-NQG 195 +GG +H+ F H + + V +G+ A ++ + S+K+ + GD A QG Sbjct: 310 EGGMVHL---ALAFNPSHLEIVSPVVMGSVRARLDRLDQPGSNKVLPITIHGDAAVIGQG 366 Query: 196 QVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDG 251 V E+ N++ V + ++ NNQ TS R + T + + G P V+ Sbjct: 367 VVQETLNMSEARGYEVGGTVRIVINNQIGFTTSNPRDARSTQYCTDIGKMVMAPIFHVNA 426 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 D AV A+ + K + I+++ YR GH+ +D Sbjct: 427 DDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEAD 466 >gi|114690642|ref|XP_521334.2| PREDICTED: transketolase-like 1 isoform 6 [Pan troglodytes] Length = 628 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 123 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 183 DVNRLGHSGALHAEHCIDIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 239 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 240 AVVAKTFKGRG 250 >gi|317008993|gb|ADU79573.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori India7] Length = 616 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 15/163 (9%) Query: 107 TAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T+++ + H L G ++ + + G G + S + F GH VS Sbjct: 66 TSHQAYAHKLLTGRFESFSTLRQFKGLSGFTKPSE-------SAYDYFIAGHS--STSVS 116 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+A A +++ + + GDG+ + G YE+ N +I ++ +N+ ++ T Sbjct: 117 IGVGVAKAFCLKQALGMPIALLGDGSISAGIFYEALNELGDRKYPMIMILNDNEMSISTP 176 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 + S + +G P Q ++ + +T+ ++V Y Sbjct: 177 IGALSKALSQLMKG-----PFYQSFRSKVKKILSTLPESVNYL 214 >gi|308061710|gb|ADO03598.1| transketolase [Helicobacter pylori Cuz20] Length = 641 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLC-GDGDLQEGISYESASLAGHLNL 178 Query: 210 -NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N+I + ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 SNLIVIYDSNQISIEGAIN-ISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEA 233 >gi|262037441|ref|ZP_06010904.1| 1-deoxy-D-xylulose-5-phosphate synthase [Leptotrichia goodfellowii F0264] gi|261748531|gb|EEY35907.1| 1-deoxy-D-xylulose-5-phosphate synthase [Leptotrichia goodfellowii F0264] Length = 565 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 8/100 (8%) Query: 129 LTGRQGGI------SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G S+ G + S + F GH VSL TG+A A + + Sbjct: 80 LTGRKEGFLNPDKFSEISGYTNQNESKHDFFKVGH--TSTSVSLATGLAKARDLKGDKEN 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + GDG+ + G+ YE N A+ N+I + +N ++ Sbjct: 138 IIAIIGDGSLSGGEAYEGLNNASEQGTNMIIIANDNDMSI 177 >gi|217033349|ref|ZP_03438780.1| hypothetical protein HP9810_9g102 [Helicobacter pylori 98-10] gi|216944290|gb|EEC23715.1| hypothetical protein HP9810_9g102 [Helicobacter pylori 98-10] Length = 641 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLC-GDGDLQEGISYESASLAGHLNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + VI ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEA 233 >gi|6249535|emb|CAB60078.1| 1-deoxy-xylulose 5-phosphate synthase [Synechococcus elongatus PCC 6301] Length = 636 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 2/88 (2%) Query: 149 TKNGF-YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-L 206 T+N F + G G +S G G+A A + D CV GDG+ G E+ N A L Sbjct: 103 TENRFDHFGAGHASTSISAGLGMALARDAQGEDYRCVAVIGDGSLTGGMALEAINHAGHL 162 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTN 234 ++ V+ +N ++ +V S N Sbjct: 163 PKTRLLVVLNDNDMSISPNVGALSRYLN 190 >gi|330814377|ref|YP_004358616.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] gi|327487472|gb|AEA81877.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase (farnesyldiphosphate synthase) / Geranylgeranyl pyrophosphate synthetase [Candidatus Pelagibacter sp. IMCC9063] Length = 636 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +GG + F+ + + F H +S G G+A A + Sbjct: 84 LTGRRNKIRTLRQGGGLSGFTKRAESQYDPFGAAHS--STSISAGLGMAVARDLEGKNNS 141 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDGA + G YE+ N A + +I ++ +N ++ V S+ Sbjct: 142 IISVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAPPVGAMSS 190 >gi|257482377|ref|ZP_05636418.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 630 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 45/230 (19%), Positives = 85/230 (36%), Gaps = 52/230 (22%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ +S + K G Y G+ +S G+A A++ + S++ + Sbjct: 95 LTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIASRLQGSERKSI 154 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV------------SRASAQ 232 GDGA G +E+ N A N++ ++ +N ++ +V SR + Sbjct: 155 AVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSISRNVGGLSNYLAKILSSRTYSS 214 Query: 233 TNFSKRGVSFNIPGM------------------------------QVDGMDIRAVKATMD 262 + V +PG +DG D+ + AT+ Sbjct: 215 MREGSKKVLSRLPGAWEIARRTEEYAKGMLVPGTLFEELGWNYIGPIDGHDLPTLIATLR 274 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDP 310 R KGP + ++T + +G + + DP Y ++ + + P Sbjct: 275 N----MRDLKGPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLNAPVAP 320 >gi|217033356|ref|ZP_03438787.1| hypothetical protein HP9810_9g109 [Helicobacter pylori 98-10] gi|216944297|gb|EEC23722.1| hypothetical protein HP9810_9g109 [Helicobacter pylori 98-10] Length = 616 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 15/163 (9%) Query: 107 TAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T+++ + H L G ++ + + G G + S + F GH VS Sbjct: 66 TSHQAYAHKLLTGRFESFSTLRQFKGLSGFTKPSE-------SAYDYFIAGHS--STSVS 116 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+A A +++ + + GDG+ + G YE+ N +I ++ +N+ ++ T Sbjct: 117 IGVGVAKAFCLKQALGMPIALLGDGSISAGIFYEALNELGDRKYPMIMILNDNEMSISTP 176 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 + S + +G P Q ++ + +T+ ++V Y Sbjct: 177 IGALSKALSQLMKG-----PFYQSFRSKVKKILSTLPESVNYL 214 >gi|163736593|ref|ZP_02144012.1| transketolase [Phaeobacter gallaeciensis BS107] gi|161390463|gb|EDQ14813.1| transketolase 1 [Phaeobacter gallaeciensis BS107] Length = 673 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 17/144 (11%) Query: 158 GIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLN 210 G +G ++ G A A + +R+ D V GDG +G E+ +A +L Sbjct: 124 GPLGQGIANAVGFAMAEEMQRAHYGRKLVDHHTYVIAGDGCLMEGISQEAIGLAGRHSLG 183 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV---DGMDIRAVKATMDKAVAY 267 + V +N S +TN +R F G QV DG D +A+ D+A+ Sbjct: 184 KLIVFWDNNNITIDGTVELSDRTNQVQR---FKASGWQVIEIDGHDPKAI----DEAIEA 236 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSD 291 + K P +I T+ GH+ D Sbjct: 237 AKKSKKPSMIACKTHIALGHAAQD 260 >gi|299066177|emb|CBJ37361.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein, thiamin-binding [Ralstonia solanacearum CMR15] Length = 636 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAM 222 +S G+A K + +++ + GDGA + G +E+ N A ++ NL ++ V+ +N ++ Sbjct: 122 ISAALGMALGAKTQGENRVAIAVIGDGAMSAGMAFEAMNNAGVYRNLPLVVVLNDNDMSI 181 Query: 223 GTSV 226 V Sbjct: 182 SPPV 185 >gi|291613175|ref|YP_003523332.1| deoxyxylulose-5-phosphate synthase [Sideroxydans lithotrophicus ES-1] gi|291583287|gb|ADE10945.1| deoxyxylulose-5-phosphate synthase [Sideroxydans lithotrophicus ES-1] Length = 614 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 16/114 (14%) Query: 129 LTGRQ---GGISKGKGGSMHMFSTKN-----GFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 LTGR+ GG+ G + F +N F GH +S G+A A + D Sbjct: 82 LTGRRAAMGGLRMAHG--ISGFPKRNESRYDAFGTGHS--STSISAALGMAVAARLAGKD 137 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 V GDGA + G +E+ N A + N++ ++ +N S+SR N Sbjct: 138 NRSVAIIGDGAMSGGMAFEALNNAGAMDANLLVILNDND----MSISRPVGALN 187 >gi|305665591|ref|YP_003861878.1| 1-deoxy-D-xylulose-5-phosphate synthase [Maribacter sp. HTCC2170] gi|88710347|gb|EAR02579.1| 1-deoxy-D-xylulose-5-phosphate synthase [Maribacter sp. HTCC2170] Length = 591 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 26/200 (13%) Query: 100 TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 T D++I ++ +GH + G K + E + GGIS S S + F GH Sbjct: 63 TPDDKLIWDVGHQAYGHKILTG---RKNLFETNRQLGGISGFPNKSE---SNYDPFGTGH 116 Query: 158 GIVGAQVSLGTGIAFA-NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 LG IA N + + I V+ GD + G +E N A + N N++ V+ Sbjct: 117 SSTSISAILGMAIAAQLNGDTQRNHIAVI--GDASIASGMAFEGLNHAGVTNANMLVVLN 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRG----------VSFNIPGMQVDGMDIRAVKATMDKAVA 266 +N + SV K+G ++F+ G +DG ++ ++ +++ Sbjct: 175 DNAIGIDPSVGALKKYLTNVKKGTAKDENIFECLNFDYTG-PIDGHNLNSLLRELER--- 230 Query: 267 YCRAHKGPIIIEMLTYRYRG 286 + GP ++ ++T + +G Sbjct: 231 -LKNVSGPKLLHIITTKGKG 249 >gi|317177173|dbj|BAJ54962.1| transketolase [Helicobacter pylori F16] Length = 641 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A NL Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLC-GDGDLQEGISYESASLAGHLNL 178 Query: 210 NVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + VI ++NQ ++ +++ S R ++ N ++ DG D +A+ +++A Sbjct: 179 NNLIVIYDSNQISIEGAIN-ISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEA 233 >gi|308061702|gb|ADO03590.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori Cuz20] Length = 616 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 15/163 (9%) Query: 107 TAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T+++ + H L G ++ + + G G + S + F GH VS Sbjct: 66 TSHQAYAHKLLTGRFESFSTLRQFKGLSGFTKPSE-------SAYDYFIAGHS--STSVS 116 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+A A +++ + + GDG+ + G YE+ N +I ++ +N+ ++ T Sbjct: 117 IGVGVAKAFCLKQALGMPIALLGDGSISAGIFYEALNELGDRKYPMIMILNDNEMSISTP 176 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 + S + +G P Q ++ + +T+ ++V Y Sbjct: 177 IGALSKALSQLMKG-----PFYQSFRSKVKKILSTLPESVNYL 214 >gi|299146614|ref|ZP_07039682.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides sp. 3_1_23] gi|298517105|gb|EFI40986.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides sp. 3_1_23] Length = 585 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 38/170 (22%), Positives = 74/170 (43%), Gaps = 24/170 (14%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH VSL +G+A ++ + GDG+ + G+ +E + AA Sbjct: 105 SEHDFFVIGH--TSTSVSLASGLAKGRDLTGGNENIIAVIGDGSLSGGEAFEGLDYAAEL 162 Query: 208 NLNVIYVIENNQYAMGTS------------VSRASAQTNFSKRGVSFNIPGMQV-DGMDI 254 N+I ++ +NQ ++ + S + NF K + + + V DG D+ Sbjct: 163 GTNMIIIVNDNQMSIAENHGGLYRNLKELRDSNGQCECNFFK---AMGLDYIYVNDGNDV 219 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEIN 302 +A + +A + + + PI++ + T + +G+ + D Y R N Sbjct: 220 QA----LIEAFSKVKDIQHPIVVHINTLKGKGYERAEQDKETYHWRTPFN 265 >gi|285019098|ref|YP_003376809.1| transketolase [Xanthomonas albilineans GPE PC73] gi|283474316|emb|CBA16817.1| putative transketolase protein [Xanthomonas albilineans] Length = 666 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 16/108 (14%) Query: 172 FANKYRRSDKICV-----VCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAM-GT 224 A +Y R + V V GDG +G +E+ ++A W L ++ +NNQ ++ G Sbjct: 135 LAQRYNRPEHQIVDHRTWVFMGDGCLMEGISHEAASLAGTWGLGKLVAFWDNNQISIDGN 194 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQV----DGMDIRAVKATMDKAVAYC 268 + S T F G QV DG D A+KA ++ A+A C Sbjct: 195 TAGWFSDDTP-----ARFEAYGWQVVRDVDGHDAEAIKAAIESAMAEC 237 >gi|261837788|gb|ACX97554.1| 1-deoxyxylulose-5-phosphate synthase [Helicobacter pylori 51] Length = 618 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 15/163 (9%) Query: 107 TAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T+++ + H L G ++ + + G G + S + F GH VS Sbjct: 68 TSHQAYAHKLLTGRFESFSTLRQFKGLSGFTKPSE-------SAYDYFIAGHS--STSVS 118 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+A A +++ + + GDG+ + G YE+ N +I ++ +N+ ++ T Sbjct: 119 IGVGVAKAFCLKQALGMPIALLGDGSISAGIFYEALNELGDRKYPMIMILNDNEMSISTP 178 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 + S + +G P Q ++ + +T+ ++V Y Sbjct: 179 IGALSKALSQLMKG-----PFYQSFRSKVKKILSTLPESVNYL 216 >gi|237653209|ref|YP_002889523.1| 2-oxoglutarate dehydrogenase E1 component [Thauera sp. MZ1T] gi|237624456|gb|ACR01146.1| 2-oxoglutarate dehydrogenase, E1 subunit [Thauera sp. MZ1T] Length = 949 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 23/174 (13%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-AN 193 GG MH+ F H I+ V G +A + RR D + V+ GD A A Sbjct: 308 GGPMHL---TLAFNPSHLEIINPVVE---GSVYARQVRRGDADKKQVLPVLIHGDAAVAG 361 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQV 249 QG E N + ++++ NNQ TS R + + P V Sbjct: 362 QGVNQEMLNFSQTRGYGTGGTVHLVVNNQIGFTTSDPRDYRSSLYCTDIFKMVEAPIFHV 421 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD------PANYRT 297 +G D AV AV + + K ++++++ +R GH+ D P YRT Sbjct: 422 NGDDPEAVALVTALAVEFRQEFKKDVVVDIICFRKLGHNEQDEPMVTQPLMYRT 475 >gi|71064801|ref|YP_263528.1| 1-deoxy-D-xylulose-5-phosphate synthase [Psychrobacter arcticus 273-4] gi|118595605|sp|Q4FV64|DXS_PSYA2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|71037786|gb|AAZ18094.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Psychrobacter arcticus 273-4] Length = 680 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 10/129 (7%) Query: 129 LTGRQG--GISKGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ G + K G Y G+ +S G G++ A +Y+ + Sbjct: 121 LTGRRDRLGTIRSKAGLTAFPERAESVYDTFGVGHSSTSISAGLGMSLALRYQGRAQTVA 180 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 GDGA G +E+ N A + +++ ++ +N ++ S+ FS+ Sbjct: 181 CIIGDGAMTGGMAFEAMNDAVQQDADLMVILNDNDMSISCSIG------GFSRHLAMLWE 234 Query: 245 PGMQVDGMD 253 G QVD D Sbjct: 235 SGYQVDISD 243 >gi|323529399|ref|YP_004231551.1| transketolase domain-containing protein [Burkholderia sp. CCGE1001] gi|323386401|gb|ADX58491.1| Transketolase domain-containing protein [Burkholderia sp. CCGE1001] Length = 287 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 3/111 (2%) Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 M S G G +G +++ G K + S + F DG ++G ++E A+ Sbjct: 109 MASYTPGMEMSGGSLGHGLTIAVGRCLGLKRKGSKSLVYTLFSDGELDEGAIWEGIMSAS 168 Query: 206 LWNL-NVIYVIE-NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 W L N+I +++ NNQ A G S + + K +F +VDG DI Sbjct: 169 HWKLDNLIAIVDVNNQQADGPSTQIMAFEPLVDKL-EAFGWFVQRVDGNDI 218 >gi|237722920|ref|ZP_04553401.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides sp. 2_2_4] gi|229447442|gb|EEO53233.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides sp. 2_2_4] Length = 585 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 38/170 (22%), Positives = 74/170 (43%), Gaps = 24/170 (14%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH VSL +G+A ++ + GDG+ + G+ +E + AA Sbjct: 105 SEHDFFVIGH--TSTSVSLASGLAKGRDLTGGNENIIAVIGDGSLSGGEAFEGLDYAAEL 162 Query: 208 NLNVIYVIENNQYAMGTS------------VSRASAQTNFSKRGVSFNIPGMQV-DGMDI 254 N+I ++ +NQ ++ + S + NF K + + + V DG D+ Sbjct: 163 GTNMIIIVNDNQMSIAENHGGLYRNLKELRDSNGQCECNFFK---AMGLDYIYVNDGNDV 219 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEIN 302 +A + +A + + + PI++ + T + +G+ + D Y R N Sbjct: 220 QA----LIEAFSKVKDIQHPIVVHINTLKGKGYERAEQDKETYHWRTPFN 265 >gi|114690640|ref|XP_001140035.1| PREDICTED: hypothetical protein LOC465937 isoform 4 [Pan troglodytes] Length = 645 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 123 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 183 DVNRLGHSGALHAEHCIDIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 239 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 240 AVVAKTFKGRG 250 >gi|325109157|ref|YP_004270225.1| 1-deoxy-D-xylulose-5-phosphate synthase [Planctomyces brasiliensis DSM 5305] gi|324969425|gb|ADY60203.1| 1-deoxy-D-xylulose-5-phosphate synthase [Planctomyces brasiliensis DSM 5305] Length = 638 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 14/149 (9%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD-KICVVCFGDGAANQGQVYESFNIAAL 206 S + F GH GA VS G+ A+ D + V GDGA G V+E+ N A Sbjct: 108 SPYDLFMTGHA--GASVSTVLGLQAADDLLFEDGRKSVAVIGDGALPSGVVFEAMNNAVG 165 Query: 207 WNLNVIYVIENNQYAMGTSV---------SRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 +++ ++ +NQ + V +R + N KR +++ + + + G + Sbjct: 166 LKKDILVILNDNQMGICPRVGGLATYLDNARVAPFYNGLKRDIAWALNKVPMVGNSVEHA 225 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + M AV H G + EM +RY G Sbjct: 226 LSNMKDAVKTL-LHGGRLFEEM-GFRYIG 252 >gi|237797520|ref|ZP_04585981.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020370|gb|EGI00427.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 631 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 48/244 (19%), Positives = 95/244 (38%), Gaps = 56/244 (22%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ +S + K G Y G+ +S G+A A++ + S++ + Sbjct: 95 LTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIASRLQGSERKSI 154 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV------------------ 226 GDGA G +E+ N A N++ ++ +N ++ +V Sbjct: 155 AVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSISRNVGGLSNYLAKILSSRTYTS 214 Query: 227 ---------SRASAQTNFSKRGVSFN----IPGM-----------QVDGMDIRAVKATMD 262 SR ++R + +PG +DG D+ + AT+ Sbjct: 215 MREGSKKVLSRLPGAWEIARRTEEYAKGMLVPGTLFEELGWNYIGPIDGHDLPTLIATLR 274 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLH 320 R KGP + ++T + +G + + DP Y I ++ + P+ ++K++ Sbjct: 275 N----MRDLKGPQFLHVVTKKGKGFAPAEVDPIGYHA---ITKLEPLNAPV-SIQKKVSA 326 Query: 321 NKWA 324 K++ Sbjct: 327 PKYS 330 >gi|163760422|ref|ZP_02167504.1| deoxyxylulose-5-phosphate synthase [Hoeflea phototrophica DFL-43] gi|162282373|gb|EDQ32662.1| deoxyxylulose-5-phosphate synthase [Hoeflea phototrophica DFL-43] Length = 675 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 30/64 (46%) Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 +S G G A A + D + GDGA + G YE+ N A + ++ +N+ ++ Sbjct: 154 SISAGLGFATARSFGFGDGDAIAVIGDGAMSAGMAYEAMNNAGTMGKRLFVILNDNEMSI 213 Query: 223 GTSV 226 SV Sbjct: 214 SPSV 217 >gi|330872287|gb|EGH06436.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. glycinea str. race 4] Length = 622 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 38/199 (19%), Positives = 74/199 (37%), Gaps = 48/199 (24%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A++ + S++ + GDGA G +E+ N A N++ ++ Sbjct: 118 GVGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVIL 177 Query: 216 ENNQYAMGTSV------------SRASAQTNFSKRGVSFNIPGM---------------- 247 +N ++ +V SR + + V +PG Sbjct: 178 NDNDMSISRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAWEIARRTEEYAKGMLV 237 Query: 248 --------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--D 291 +DG D+ + AT+ R KGP + ++T + +G + + D Sbjct: 238 PGTLFEELGWNYIGPIDGHDLPTLIATLRN----MRDLKGPQFLHVVTKKGKGFAPAEVD 293 Query: 292 PANYRTREEINEMRSNHDP 310 P Y ++ + + P Sbjct: 294 PIGYHAITKLEPLNAPVAP 312 >gi|317179253|dbj|BAJ57041.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori F30] Length = 616 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 15/163 (9%) Query: 107 TAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T+++ + H L G ++ + + G G + S + F GH VS Sbjct: 66 TSHQAYAHKLLTGRFESFSTLRQFKGLSGFTKPSE-------SAYDYFIAGHS--STSVS 116 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+A A +++ + + GDG+ + G YE+ N +I ++ +N+ ++ T Sbjct: 117 IGVGVAKAFCLKQALGMPIALLGDGSISAGIFYEALNELGDRKYPMIMILNDNEMSISTP 176 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 + S + +G P Q ++ + +T+ ++V Y Sbjct: 177 IGALSKALSQLMKG-----PFYQSFRSKVKKILSTLPESVNYL 214 >gi|190575084|ref|YP_001972929.1| 2-oxoglutarate dehydrogenase E1 component [Stenotrophomonas maltophilia K279a] gi|190013006|emb|CAQ46638.1| putative 2-oxoglutarate dehydrogenase E1 component [Stenotrophomonas maltophilia K279a] Length = 943 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 6/122 (4%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R + ++ GD A + QG V E F ++ V ++++ NNQ TS + T Sbjct: 345 RKQVMPILIHGDAAFSGQGVVMELFQMSQARGFAVGGTVHIVVNNQVGFTTSNPLDTRST 404 Query: 234 NFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD- 291 ++ P + V+G D AV A + + ++I+++ YR GH+ +D Sbjct: 405 RYATDVAKMIAAPVLHVNGDDPEAVVFAAQLAFEFRQKFAKDVVIDLMCYRRWGHNEADE 464 Query: 292 PA 293 PA Sbjct: 465 PA 466 >gi|291557146|emb|CBL34263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Eubacterium siraeum V10Sc8a] Length = 585 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 20/147 (13%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G VSL G+A A + + GDG+ + G+ E+ + A ++ N+I +I + Sbjct: 113 GHTSTSVSLALGLAKARDLKHESGNVIAVIGDGSLSGGEALEAIDYAGEFDGNLIVIIND 172 Query: 218 NQYAMGTS------------VSRASAQTN-FSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N ++ + A TN F+ G+ + DG DI ++ A K Sbjct: 173 NDMSIAENHGGMYKNLKALRDGNGKADTNLFTAMGLDYVFVK---DGNDIESLIAAFSK- 228 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + K P+ + ++T + +G S ++ Sbjct: 229 ---VKDSKRPVAVHIVTEKGKGLSFAE 252 >gi|271499013|ref|YP_003332038.1| Transketolase domain-containing protein [Dickeya dadantii Ech586] gi|270342568|gb|ACZ75333.1| Transketolase domain protein [Dickeya dadantii Ech586] Length = 289 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 2/102 (1%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S+G G+A NK R+ + V GDG +G +E+ A+ + L N++ ++ Sbjct: 135 GALGHGLSIGAGLALGNKLANRAHRRVFVLMGDGELAEGSNWEAAMAASKFRLDNLVAIV 194 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 + N+ + + + +F ++ DG D A+ Sbjct: 195 DRNRLQLAGKTEDIMPLEPLADKWRAFGFEVVECDGHDPAAI 236 >gi|157164379|ref|YP_001466465.1| 1-deoxy-D-xylulose-5-phosphate synthase [Campylobacter concisus 13826] gi|112801582|gb|EAT98926.1| 1-deoxy-D-xylulose-5-phosphate synthase [Campylobacter concisus 13826] Length = 608 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 55/259 (21%), Positives = 95/259 (36%), Gaps = 59/259 (22%) Query: 79 GGFCHLCIGQEAVIVGM-KMSLTEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG IG +IV M K+ D I +++ + H L G D + + G G Sbjct: 32 GGHLSSNIGAVEIIVAMHKIFDVTKDPFIFDVSHQSYAHKLLTGRWDKFDTLRKFNGISG 91 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 + S + F GH +SL G A A K + +++ V GDG+ + Sbjct: 92 YTKPSE-------SKFDYFVAGHS--STSISLAVGAAKAIKLKNEERLPVAVIGDGSLSG 142 Query: 195 GQVYESFNIAALWNLNVIYVIENNQY-------AMGTSVSRASAQTNFSK---------- 237 G YE+ N + ++ +N+ A+ +S+ A + K Sbjct: 143 GMAYEALNELGDRKYPCVIILNDNEMSISKPIGALSKYLSQMMAGQFYQKFKGRVERFLS 202 Query: 238 --------------RGVSFNIPGM-----------QVDGMDIRAVKATMDKAVAYCRAHK 272 G+ PGM VDG D+ A+ +T A + K Sbjct: 203 YMPDSAAYMARRMEEGIRLITPGMFFEELGLEYIGPVDGHDLLALLSTFKTA----KNMK 258 Query: 273 GPIIIEMLTYRYRGHSMSD 291 P+I+ + T + +G+ ++ Sbjct: 259 KPVIVHVQTLKGKGYEFAE 277 >gi|289623774|ref|ZP_06456728.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646545|ref|ZP_06477888.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. aesculi str. 2250] gi|298484884|ref|ZP_07002983.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160571|gb|EFI01593.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330865925|gb|EGH00634.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 630 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 57/245 (23%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ +S + K G Y G+ +S G+A A++ + S++ + Sbjct: 95 LTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIASRLQGSERKSI 154 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV------------SRASAQ 232 GDGA G +E+ N A N++ ++ +N ++ +V SR + Sbjct: 155 AVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSISRNVGGLSNYLAKILSSRTYSS 214 Query: 233 TNFSKRGVSFNIPGM------------------------------QVDGMDIRAVKATMD 262 + V +PG +DG D+ + AT+ Sbjct: 215 MREGSKKVLSRLPGAWEIARRTEEYAKGMLVPGTLFEELGWNYIGPIDGHDLPTLIATLR 274 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLH 320 R KGP + ++T + +G + + DP Y I ++ + P+ V K++ Sbjct: 275 N----MRDLKGPQFLHVVTKKGKGFAPAEVDPIGYHA---ITKLEPLNAPV--VPKKISA 325 Query: 321 NKWAS 325 K+++ Sbjct: 326 PKYSA 330 >gi|167746998|ref|ZP_02419125.1| hypothetical protein ANACAC_01710 [Anaerostipes caccae DSM 14662] gi|167653958|gb|EDR98087.1| hypothetical protein ANACAC_01710 [Anaerostipes caccae DSM 14662] Length = 627 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 21/120 (17%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-----------YGGHGIVGAQVSLGTGIAFANKYR 177 LTGR+ G + S+ F +GF + GH V+LG +A A + Sbjct: 79 LTGRKDGFA-----SLRQFHGMSGFPKPTESDCDAFHSGHSSTSIGVALG--LAQARDLK 131 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALW---NLNVIYVIENNQYAMGTSVSRASAQTN 234 +D+ V GDGA + G YE+ N A +I ++ +N+ ++ +V S N Sbjct: 132 GTDETIVAVLGDGALSGGMAYEALNNMARLREEKRKLIVILNDNKMSISENVGGMSGYLN 191 >gi|308182523|ref|YP_003926650.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori PeCan4] gi|308064708|gb|ADO06600.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori PeCan4] Length = 616 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 15/163 (9%) Query: 107 TAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T+++ + H L G ++ + + G G + S + F GH VS Sbjct: 66 TSHQAYAHKLLTGRFESFSTLRQFKGLSGFTKPSE-------SAYDYFIAGHS--STSVS 116 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+A A +++ + + GDG+ + G YE+ N +I ++ +N+ ++ T Sbjct: 117 IGVGVAKAFCLKQALGMPIALLGDGSISAGIFYEALNELGDRKYPMIMILNDNEMSISTP 176 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 + S + +G P Q ++ + +T+ ++V Y Sbjct: 177 IGALSKALSQLMKG-----PFYQSLRSKVKKILSTLPESVNYL 214 >gi|212703022|ref|ZP_03311150.1| hypothetical protein DESPIG_01060 [Desulfovibrio piger ATCC 29098] gi|212673610|gb|EEB34093.1| hypothetical protein DESPIG_01060 [Desulfovibrio piger ATCC 29098] Length = 634 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 44/217 (20%), Positives = 75/217 (34%), Gaps = 63/217 (29%) Query: 139 GKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 G+ H T G G G G +S G+A A + + Sbjct: 89 GRASQFHTLRTLGGLAGFPRRSESPYDRFGVGHSSTSISAALGMAMARDLAGGKEHVLAV 148 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS--AQTNFSKRGV---- 240 GDG+ G+ +E N+A +I V+ +N+ ++ +V S S+R V Sbjct: 149 IGDGSLTAGEAFEGLNLAGHMGRRLIVVLNDNEISISPNVGALSLFLSRTLSRRWVRQTR 208 Query: 241 -----------------------------SFNIPGM-----------QVDGMDIRAVKAT 260 SF PGM VDG D+ A+ Sbjct: 209 KDVLQLLRSIPRIGQKLALYAMRGEWSFKSFFTPGMLFEAFRFTYIGPVDGHDLPALCRH 268 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 + A A GP+++ + T + +G++ + DP ++ Sbjct: 269 LQMAAA---VEDGPVLLHVRTCKGKGYAPAEKDPTHF 302 >gi|317501326|ref|ZP_07959529.1| hypothetical protein HMPREF1026_01472 [Lachnospiraceae bacterium 8_1_57FAA] gi|331088360|ref|ZP_08337279.1| hypothetical protein HMPREF1025_00862 [Lachnospiraceae bacterium 3_1_46FAA] gi|316897290|gb|EFV19358.1| hypothetical protein HMPREF1026_01472 [Lachnospiraceae bacterium 8_1_57FAA] gi|330408604|gb|EGG88070.1| hypothetical protein HMPREF1025_00862 [Lachnospiraceae bacterium 3_1_46FAA] Length = 249 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 9/101 (8%) Query: 129 LTGRQGG------ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G S+ G + S + F GH VSL TG+A A + + Sbjct: 84 LTGRKNGYISDEHFSEDSGYTNPEESEHDFFNVGH--TSTSVSLATGLAKARDIKGDKEN 141 Query: 183 CVVCFGDGAANQGQVYESFNIA-ALWNLNVIYVIENNQYAM 222 + GDG+ + G+ E N+A + N N+I ++ +N+ ++ Sbjct: 142 IIAIIGDGSLSGGEALEGLNVAGSEINSNLIIIVNDNEQSI 182 >gi|284928885|ref|YP_003421407.1| 1-deoxy-D-xylulose-5-phosphate synthase [cyanobacterium UCYN-A] gi|284809344|gb|ADB95049.1| 1-deoxy-D-xylulose-5-phosphate synthase [cyanobacterium UCYN-A] Length = 636 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 13/112 (11%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ + H KNG G G G +S G G+A A + + Sbjct: 79 ILTGRYNNFHTLRQKNGIAGYLKRCESRFDHFGAGHASTSISAGLGMAIARDNKGENYKV 138 Query: 184 VVCFGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVSRASAQTN 234 V GDGA G E+ N A L N +++ V+ +N+ ++ +V S N Sbjct: 139 VSIIGDGALTGGMALEAINHAGHLPNTSLMVVLNDNEMSISPNVGAISRYLN 190 >gi|163816791|ref|ZP_02208154.1| hypothetical protein COPEUT_02981 [Coprococcus eutactus ATCC 27759] gi|158448048|gb|EDP25043.1| hypothetical protein COPEUT_02981 [Coprococcus eutactus ATCC 27759] Length = 622 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 52/239 (21%), Positives = 88/239 (36%), Gaps = 71/239 (29%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF-----------YGGHGIVGAQVSLGTGIAFANKYR 177 LTGR K + GS+ F +GF GH +S G+A A + Sbjct: 81 LTGR-----KDEMGSLRQFGGMSGFPKTSESPCDAFNTGHS--STSISAALGMACARSIK 133 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + + GDG+ G VYE+ N A + + V+ +N ++ +V S + + Sbjct: 134 GTHENIAAVIGDGSFTGGMVYEAMNNMADIKTSCLVVLNDNNMSIDQNVGGMSTYLSKLR 193 Query: 238 RGVSFN-----------------------------------IPGM-----------QVDG 251 G +N +PGM +DG Sbjct: 194 VGQQYNDFKGNVEKVLMKIPVAGERLAKGLKKSKDSIKQILVPGMFFEELGVTYIGPIDG 253 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG--HSMSDPANYRTREEINEMRSNH 308 DI ++AT KA+ R PI++ + T + +G H+ P+ + E ++R+ H Sbjct: 254 HDIETMEATFRKALKLDR----PILVHVKTVKGKGYVHAERHPSYFHGVEPF-DIRTGH 307 >gi|317177165|dbj|BAJ54954.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori F16] Length = 616 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 15/163 (9%) Query: 107 TAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T+++ + H L G ++ + + G G + S + F GH VS Sbjct: 66 TSHQAYAHKLLTGRFESFSTLRQFKGLSGFTKPSE-------SAYDYFIAGHS--STSVS 116 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+A A +++ + + GDG+ + G YE+ N +I ++ +N+ ++ T Sbjct: 117 IGVGVAKAFCLKQALGMPIALLGDGSISAGIFYEALNELGDRKYPMIMILNDNEMSISTP 176 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 + S + +G P Q ++ + +T+ ++V Y Sbjct: 177 IGALSKALSQLMKG-----PFYQSFRSKVKKILSTLPESVNYL 214 >gi|114690644|ref|XP_001139789.1| PREDICTED: hypothetical protein LOC465937 isoform 1 [Pan troglodytes] Length = 578 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 73 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 132 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 133 DVNRLGHSGALHAEHCIDIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 189 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 190 AVVAKTFKGRG 200 >gi|254166496|ref|ZP_04873350.1| Transketolase, thiamine diphosphate binding domain, putative [Aciduliprofundum boonei T469] gi|289596389|ref|YP_003483085.1| Transketolase domain protein [Aciduliprofundum boonei T469] gi|197624106|gb|EDY36667.1| Transketolase, thiamine diphosphate binding domain, putative [Aciduliprofundum boonei T469] gi|289534176|gb|ADD08523.1| Transketolase domain protein [Aciduliprofundum boonei T469] Length = 281 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 32/148 (21%), Positives = 63/148 (42%), Gaps = 5/148 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +G ++E+ AA L N+I +++ Sbjct: 120 GSLGQGLSAAIGMALAAKLDNKDYRVYALLGDGEIEEGNIWEAAMTAATRKLDNLIAIVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N+ + ++ +F + ++G D+ + +++A + P + Sbjct: 180 RNKIQLDDFTDTMVVLDPLEEKWNAFGWRVLSINGHDVVQLIRALEEA---KKTQGKPTV 236 Query: 277 IEMLTYRYRGHS-MSDPANYRTREEINE 303 I T + +G S M + A Y + +E Sbjct: 237 IIAHTVKGKGVSYMENTAKYHGKPPQSE 264 >gi|331009792|gb|EGH89848.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 630 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 38/199 (19%), Positives = 74/199 (37%), Gaps = 48/199 (24%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A++ + S++ + GDGA G +E+ N A N++ ++ Sbjct: 126 GVGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVIL 185 Query: 216 ENNQYAMGTSV------------SRASAQTNFSKRGVSFNIPGM---------------- 247 +N ++ +V SR + + V +PG Sbjct: 186 NDNDMSISRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAWEIARRTEEYAKGMLV 245 Query: 248 --------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--D 291 +DG D+ + AT+ R KGP + ++T + +G + + D Sbjct: 246 PGTLFEELGWNYIGPIDGHDLPTLIATLRN----MRDLKGPQFLHVVTKKGKGFAPAEVD 301 Query: 292 PANYRTREEINEMRSNHDP 310 P Y ++ + + P Sbjct: 302 PIGYHAITKLEPLNAPVAP 320 >gi|320540320|ref|ZP_08039972.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Serratia symbiotica str. Tucson] gi|320029640|gb|EFW11667.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Serratia symbiotica str. Tucson] Length = 621 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 51/223 (22%), Positives = 89/223 (39%), Gaps = 64/223 (28%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ I+ + KGG +H F S + GH LG +A + Sbjct: 88 LTGRRDRIATIRQKGG-LHPFPWRAESEYDVLSVGHSSTSISAGLGMAVAAQREGLGRRT 146 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS---AQ------ 232 +CV+ GDGA G +E+ N A N +++ V+ +N+ ++ +V + AQ Sbjct: 147 LCVI--GDGAITAGMAFEAMNHAGDINPDILVVLNDNEMSISENVGALNNHLAQLLSGKL 204 Query: 233 ------------------------------------TNFSKRGVSFNIPGMQVDGMDIRA 256 T F + G ++ P VDG D+ Sbjct: 205 YTTLREGGKKVLSGLPPIKELVKRTEEHLKGMVVPGTLFEELGFNYIGP---VDGHDVHN 261 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRT 297 + AT+ R KGP ++ ++T + RG++ + DP ++ + Sbjct: 262 LVATLKN----MRDLKGPQLLHIMTKKGRGYAPAEKDPISFHS 300 >gi|317471814|ref|ZP_07931151.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anaerostipes sp. 3_2_56FAA] gi|316900705|gb|EFV22682.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anaerostipes sp. 3_2_56FAA] Length = 627 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 11/115 (9%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G + + G S + F+ GH V+LG +A A + +D+ Sbjct: 79 LTGRKDGFASLRQFHGMSGFPKPTESDCDAFHSGHSSTSIGVALG--LAQARDLKGTDET 136 Query: 183 CVVCFGDGAANQGQVYESFNIAALW---NLNVIYVIENNQYAMGTSVSRASAQTN 234 V GDGA + G YE+ N A +I ++ +N+ ++ +V S N Sbjct: 137 IVAVLGDGALSGGMAYEALNNMARLREEKRKLIVILNDNKMSISENVGGMSGYLN 191 >gi|308063212|gb|ADO05099.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori Sat464] gi|317180751|dbj|BAJ58537.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori F32] Length = 616 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 15/163 (9%) Query: 107 TAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T+++ + H L G ++ + + G G + S + F GH VS Sbjct: 66 TSHQAYAHKLLTGRFESFSTLRQFKGLSGFTKPSE-------SAYDYFIAGHS--STSVS 116 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+A A +++ + + GDG+ + G YE+ N +I ++ +N+ ++ T Sbjct: 117 IGVGVAKAFCLKQALGMPIALLGDGSISAGIFYEALNELGDRKYPMIMILNDNEMSISTP 176 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 + S + +G P Q ++ + +T+ ++V Y Sbjct: 177 IGALSKALSQLMKG-----PFYQSFRSKVKKILSTLPESVNYL 214 >gi|270009468|gb|EFA05916.1| hypothetical protein TcasGA2_TC008732 [Tribolium castaneum] Length = 880 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 63/165 (38%), Gaps = 10/165 (6%) Query: 177 RRSDKIC-VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASA 231 R DKI + GD A QG E ++ + + I+++ NNQ T R + Sbjct: 280 RWGDKIINLQVHGDAAITGQGVNQECLALSGTPHFEIGGSIHLVVNNQLGFTTPADRGRS 339 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + + P + V+G V A Y R + + I+M YR GH+ D Sbjct: 340 SRYCTDLAKMISAPVIHVNGDFPEMVLKATKLAFEYQRKFRKEVFIDMNCYRQWGHNELD 399 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 + +RS +Q K+L+ EG L E E N Sbjct: 400 DPTFTNPSLYGIIRSRGTVPDQYTKKLI-----DEGILNEEEKNT 439 >gi|90420127|ref|ZP_01228035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aurantimonas manganoxydans SI85-9A1] gi|90335461|gb|EAS49211.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aurantimonas manganoxydans SI85-9A1] Length = 638 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G+ + + G + F+ + + F GH +S G G+A A Sbjct: 87 LTGRRDGMRTVRQEGGLSGFAKRTESEYDPFGAGHS--STSISAGLGMAVARDLSGGKNN 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDGA + G YE+ N A + +I ++ +N ++ SA Sbjct: 145 VIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 193 >gi|332673198|gb|AEE70015.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori 83] Length = 618 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 15/163 (9%) Query: 107 TAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T+++ + H L G ++ + + G G + S + F GH VS Sbjct: 68 TSHQAYAHKLLTGRFESFSTLRQFKGLSGFTKPSE-------SAYDYFIAGHS--STSVS 118 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+A A +++ + + GDG+ + G YE+ N +I ++ +N+ ++ T Sbjct: 119 IGVGVAKAFCLKQALGMPIALLGDGSISAGIFYEALNELGDRKYPMIMILNDNEMSISTP 178 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 + S + +G P Q ++ + +T+ ++V Y Sbjct: 179 IGALSKALSQLMKG-----PFYQSFRSKVKKILSTLPESVNYL 216 >gi|324999758|ref|ZP_08120870.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudonocardia sp. P1] Length = 643 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESF-NIAALWNLNVIYVIENN 218 GIA AN D+ V GDGA G +E+ NIAA + NV+ V+ +N Sbjct: 128 GIARANALTGRDRHVVAVVGDGALTGGMAWEALNNIAAGEDRNVVIVVNDN 178 >gi|238926972|ref|ZP_04658732.1| transketolase [Selenomonas flueggei ATCC 43531] gi|238885206|gb|EEQ48844.1| transketolase [Selenomonas flueggei ATCC 43531] Length = 288 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 2/127 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A KY D GDG +GQ++E+ AA + L N+ ++ Sbjct: 123 GSLGQGLSTAAGMAKGAKYLGKDINVYTLLGDGELAEGQIWEATMFAAHYGLDNLCIAVD 182 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + K+ +F +DG D A+ + A + K P + Sbjct: 183 VNGLQIDGKTADVMNSAPVDKKFEAFGCAVQWIDGHDFTALASAFHTFHA-NKGSKKPTV 241 Query: 277 IEMLTYR 283 I M T + Sbjct: 242 ILMKTVK 248 >gi|218672963|ref|ZP_03522632.1| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [Rhizobium etli GR56] Length = 134 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 273 GPIIIEMLTYRYRGHSMS-DPANYRTREEINEMRSNHDPIEQVRKRLL-HNKWASE 326 GP +IE +TYR HS S DP+ YR + E +E DP+ +++K L+ W+ E Sbjct: 22 GPTLIEYVTYRVGAHSTSDDPSAYRPKTE-SEAWPLGDPVLRLKKHLIVKGAWSEE 76 >gi|304373158|ref|YP_003856367.1| Probable transketolase transmembrane protein [Mycoplasma hyorhinis HUB-1] gi|304309349|gb|ADM21829.1| Probable transketolase transmembrane protein [Mycoplasma hyorhinis HUB-1] gi|330723218|gb|AEC45588.1| transketolase [Mycoplasma hyorhinis MCLD] Length = 615 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 11/136 (8%) Query: 152 GFYGGHGIVGAQVSLGTGIAFAN-----KYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 G G +G +++ TG+A A K++ D V GDG +G E+F++A Sbjct: 109 GVEATTGPLGQGIAIATGVAIAQAHLEVKFKEIDHYTYVLCGDGDIQEGVANEAFSLAGH 168 Query: 207 WNLNVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 LN + V+ ++N + T V A+ + ++ + + V+ ++ A+ D+A+ Sbjct: 169 LRLNKLIVLYDSNNIQLDTRV-EATFTEDVKEKMTALGFNYILVEKNEVDAI----DQAI 223 Query: 266 AYCRAHKGPIIIEMLT 281 + P IE+ T Sbjct: 224 TKAKQSNLPSFIEVKT 239 >gi|238919276|ref|YP_002932791.1| transketolase (TK) [Edwardsiella ictaluri 93-146] gi|238868845|gb|ACR68556.1| transketolase (TK) [Edwardsiella ictaluri 93-146] Length = 282 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 1/119 (0%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S G G +G +S+ GIA + + + GDG +GQV+E+ AA + Sbjct: 106 SVVPGLDCSSGSLGQGLSIANGIAMGLRRQGVKRRVYCLLGDGELQEGQVWEAALTAAHY 165 Query: 208 NL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 L NV +++NN + + + + + +F + V+G + A+ + V Sbjct: 166 GLGNVCAIVDNNHVQLDGTTAEVKGVEPVADKWRAFGWNVLCVEGHSLSALLQALRSVV 224 >gi|317181694|dbj|BAJ59478.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori F57] Length = 616 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 15/163 (9%) Query: 107 TAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T+++ + H L G ++ + + G G + S + F GH VS Sbjct: 66 TSHQAYAHKLLTGRFESFSTLRQFKGLSGFTKPSE-------SAYDYFIAGHS--STSVS 116 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+A A +++ + + GDG+ + G YE+ N +I ++ +N+ ++ T Sbjct: 117 IGVGVAKAFCLKQALGMPIALLGDGSISAGIFYEALNELGDRKYPMIMILNDNEMSISTP 176 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 + S + +G P Q ++ + +T+ ++V Y Sbjct: 177 IGALSKALSQLMKG-----PFYQSFRSKVKKILSTLPESVNYL 214 >gi|195352142|ref|XP_002042573.1| GM14947 [Drosophila sechellia] gi|194124457|gb|EDW46500.1| GM14947 [Drosophila sechellia] Length = 623 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 4/109 (3%) Query: 158 GIVGAQVSLGTGIAFANKY-RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 G +G +S+ G+A+ KY ++D V G+G A +G V+ES + A + L+ + VI Sbjct: 122 GSLGQGISVAAGMAYVGKYLDKADYRTYVIVGEGEATEGAVWESLHFAGHYCLDNLCVIF 181 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI-RAVKATMDKA 264 + + V + + +R +F + ++G DI VKA ++ A Sbjct: 182 DMNKVFCSDV--GTEMEVYRERLDAFGFNALVLNGHDIDELVKAFINAA 228 >gi|300703493|ref|YP_003745095.1| 1-deoxy-d-xylulose 5-phosphate synthase [Ralstonia solanacearum CFBP2957] gi|299071156|emb|CBJ42470.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein, thiamin-binding [Ralstonia solanacearum CFBP2957] Length = 637 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAM 222 +S G+A K R ++ + GDGA + G +E+ N A ++ NL ++ V+ +N ++ Sbjct: 122 ISAALGMAQGAKTRGESRVAIAVIGDGAMSAGMAFEAMNNAGVYKNLPLVVVLNDNDMSI 181 Query: 223 GTSV 226 V Sbjct: 182 SPPV 185 >gi|315586342|gb|ADU40723.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori 35A] Length = 618 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 15/163 (9%) Query: 107 TAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T+++ + H L G ++ + + G G + S + F GH VS Sbjct: 68 TSHQAYAHKLLTGRFESFSTLRQFKGLSGFTKPSE-------SAYDYFIAGHS--STSVS 118 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+A A +++ + + GDG+ + G YE+ N +I ++ +N+ ++ T Sbjct: 119 IGVGVAKAFCLKQALGMPIALLGDGSISAGIFYEALNELGDRKYPMIMILNDNEMSISTP 178 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 + S + +G P Q ++ + +T+ ++V Y Sbjct: 179 IGALSKALSQLMKG-----PFYQSFRSKVKKILSTLPESVNYL 216 >gi|218703703|ref|YP_002411222.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli UMN026] gi|293403540|ref|ZP_06647631.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli FVEC1412] gi|298379152|ref|ZP_06989033.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli FVEC1302] gi|300900488|ref|ZP_07118655.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 198-1] gi|226740153|sp|B7N8X3|DXS_ECOLU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|218430800|emb|CAR11674.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli UMN026] gi|291429393|gb|EFF02413.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli FVEC1412] gi|298280265|gb|EFI21769.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli FVEC1302] gi|300355969|gb|EFJ71839.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 198-1] Length = 620 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|91087483|ref|XP_967991.1| PREDICTED: similar to dehydrogenase E1 and transketolase domain containing 1 [Tribolium castaneum] Length = 901 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 63/165 (38%), Gaps = 10/165 (6%) Query: 177 RRSDKIC-VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASA 231 R DKI + GD A QG E ++ + + I+++ NNQ T R + Sbjct: 301 RWGDKIINLQVHGDAAITGQGVNQECLALSGTPHFEIGGSIHLVVNNQLGFTTPADRGRS 360 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + + P + V+G V A Y R + + I+M YR GH+ D Sbjct: 361 SRYCTDLAKMISAPVIHVNGDFPEMVLKATKLAFEYQRKFRKEVFIDMNCYRQWGHNELD 420 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 + +RS +Q K+L+ EG L E E N Sbjct: 421 DPTFTNPSLYGIIRSRGTVPDQYTKKLI-----DEGILNEEEKNT 460 >gi|123966223|ref|YP_001011304.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus str. MIT 9515] gi|166201526|sp|A2BWN6|DXS_PROM5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|123200589|gb|ABM72197.1| 1-deoxy-D-xylulose 5-phosphate synthase [Prochlorococcus marinus str. MIT 9515] Length = 631 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 14/153 (9%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA-ALWNLNVIYV 214 G G +S G+A A + + CV GDGA G E+ N A L + + Sbjct: 111 GAGHASTSISAALGMAIARDAKGENHKCVAVIGDGALTGGMALEAINHAGTLPETPFLVI 170 Query: 215 IENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 + +N ++ V R S F V ++ + + G D+ T+ +V Sbjct: 171 LNDNDMSISPPVGALSTYLNKVRLSPPLQFLSNSVQESVKNIPLIGKDLPEELKTIKGSV 230 Query: 266 AYCRAHKGPIIIEMLTYRY----RGHSMSDPAN 294 K + E L + Y +GH +S+ N Sbjct: 231 RRLAVPKVGAVFEELGFTYMGPIQGHDISNLIN 263 >gi|146312485|ref|YP_001177559.1| transketolase subunit A [Enterobacter sp. 638] gi|145319361|gb|ABP61508.1| transketolase subunit A [Enterobacter sp. 638] Length = 276 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K R + C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLAGRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 ++ N+ + + + + +F M V G DI Sbjct: 173 VDWNKQQLDGELDEIICAFDLEGKFRAFGFDVMTVKGDDI 212 >gi|301022589|ref|ZP_07186461.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 69-1] gi|300397470|gb|EFJ81008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 69-1] Length = 620 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ I + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIDTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|294141506|ref|YP_003557484.1| 2-oxoglutarate dehydrogenase, E1 component [Shewanella violacea DSS12] gi|293327975|dbj|BAJ02706.1| 2-oxoglutarate dehydrogenase, E1 component [Shewanella violacea DSS12] Length = 940 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+FN++ V I ++ NNQ TS T + + Sbjct: 358 LPITIHGDSAITGQGIVQETFNMSQTRGFKVGGSIRLVINNQVGFTTSNQDDIRSTEYCT 417 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV AV Y K ++I+++ YR GH+ +D Sbjct: 418 DIAKMVQAPIFHVNADDPEAVVFISQLAVDYRNEFKRDVVIDLVCYRRHGHNEAD 472 >gi|283784239|ref|YP_003364104.1| 1-deoxyxylulose-5-phosphate synthase [Citrobacter rodentium ICC168] gi|282947693|emb|CBG87248.1| 1-deoxyxylulose-5-phosphate synthase [Citrobacter rodentium ICC168] Length = 620 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH VS G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSVSAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIKPDMLVILNDNEMSISENV 189 >gi|261867965|ref|YP_003255887.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413297|gb|ACX82668.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 616 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ + + KGG +H F + + GH +S G GIA A + + + Sbjct: 84 LTGRRDQMPTIRQKGG-LHPFPWRGESEFDVLSVGHS--STSISAGLGIAIAAERENAGR 140 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 141 KTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDNEMSISENV 185 >gi|119897846|ref|YP_933059.1| 2-oxoglutarate dehydrogenase E1 component [Azoarcus sp. BH72] gi|119670259|emb|CAL94172.1| probable 2-oxoglutarate dehydrogenase [Azoarcus sp. BH72] Length = 943 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 52/210 (24%), Positives = 81/210 (38%), Gaps = 34/210 (16%) Query: 141 GGSMHMFSTKNGFYGGH-GIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-AN 193 GG MH+ F H I+ V G +A + RR D I V+ GD A A Sbjct: 309 GGPMHL---TLAFNPSHLEIINPVVE---GSVYARQVRRKDTEKSQVIPVLIHGDAAVAG 362 Query: 194 QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKRGVSF-NIPGMQV 249 QG E N + ++++ NNQ TS R + + P V Sbjct: 363 QGVNQEMLNFSQTRGYGTGGTVHIVVNNQIGFTTSDPRDYRSSLYCTDIFKMVEAPIFHV 422 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD------PANYRTREEINE 303 +G D AV AV + + K ++++++ +R GH+ D P YR ++ Sbjct: 423 NGDDPEAVAFVTALAVEFRQQFKKDVVVDIVCFRKLGHNEQDEPMVTQPLMYRKVQQHPG 482 Query: 304 MRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 R +L ++ +EG LK E Sbjct: 483 TR-----------KLYADRLVAEGTLKSDE 501 >gi|89901099|ref|YP_523570.1| 2-oxoglutarate dehydrogenase E1 component [Rhodoferax ferrireducens T118] gi|89345836|gb|ABD70039.1| 2-oxoglutarate dehydrogenase E1 component [Rhodoferax ferrireducens T118] Length = 963 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 11/128 (8%) Query: 177 RRSDKI-----CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVS 227 RR+D + V+ GD A + QG E+F +A + +++I NNQ TS Sbjct: 358 RRADPLGKQVLPVLVHGDAAFSGQGVNMETFALAETRGYSTGGTVHIIINNQIGFTTSDP 417 Query: 228 RASAQTNFSKRGVS-FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S T + + P + V+G D AV A+ + + ++++++ +R G Sbjct: 418 RDSRSTLYCTDVIKMIEAPVVHVNGDDPEAVVLATQLALEFRLEFRKDVVVDIVCFRKLG 477 Query: 287 HSMSD-PA 293 H+ D PA Sbjct: 478 HNEQDTPA 485 >gi|33240378|ref|NP_875320.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|41016949|sp|Q7VC14|DXS_PROMA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|33237905|gb|AAP99972.1| Deoxyxylulose-5-phosphate synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 643 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 5/111 (4%) Query: 129 LTGRQG---GISKGKGGSMHMFSTKNGF-YGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 LTGR G + + G + ++ +++ F + G G +S G+A A + D CV Sbjct: 80 LTGRYGDFDSLRQQNGVAGYLKRSESSFDHFGAGHASTSISAALGMALARDRQGKDYKCV 139 Query: 185 VCFGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVSRASAQTN 234 GDGA G E+ N A L + + V+ +N ++ V S N Sbjct: 140 AVIGDGALTGGMALEAINHAGHLPSTPFLVVLNDNDMSISPPVGALSTHLN 190 >gi|323464537|gb|ADX76690.1| transketolase [Staphylococcus pseudintermedius ED99] Length = 661 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 16/135 (11%) Query: 158 GIVGAQVSLGTGIAFANKYRRS---------DKICVVCFGDGAANQGQVYESFNIAALWN 208 G +G ++ G+A A K+ + D V DG +G +E+ ++A Sbjct: 115 GPLGQGFAMSVGMAMAEKHLAAKFNKDIDVVDHYTYVLASDGDLMEGISHEAASLAGHLK 174 Query: 209 LN-VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVA 266 L+ +I + ++N ++ S+A ++ + KR ++ + V DG DI A+ DKA+ Sbjct: 175 LDKLITLYDSNDISLDGEASKAFSE-DIKKRFEAYGWNHILVKDGNDIEAI----DKAIE 229 Query: 267 YCRAHKGPIIIEMLT 281 + GP IIE+ T Sbjct: 230 EAKGQAGPTIIEVKT 244 >gi|292669172|ref|ZP_06602598.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas noxia ATCC 43541] gi|292649224|gb|EFF67196.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas noxia ATCC 43541] Length = 588 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 20/183 (10%) Query: 129 LTGRQGG-ISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR I + + G++ F S + F GH +SL TG+A A + Sbjct: 80 LTGRAAAYIDEAQYGAVSGFTNTDESPHDIFNIGH--TSTSISLATGLAKARDLAGGTEN 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK-RGVS 241 + GDG+ + G+ E N+A N+I V +N+ ++ S + F + R + Sbjct: 138 VIALIGDGSMSGGEALEGLNVAGEMETNLIIVFNDNEQSI--SENHGGMYRTFQRLRETN 195 Query: 242 FNIPG--MQVDGMDIRAVKATMD-----KAVAYCRAHKGPIIIEMLTYRYRGHSMS--DP 292 P + G+D R V D + + + + P++I + T + +G S + DP Sbjct: 196 GTAPDNLFRAMGLDYRYVADGNDAEELIRVFSAVKGTQKPVVIHIHTQKGKGLSFAEDDP 255 Query: 293 ANY 295 + Sbjct: 256 EGW 258 >gi|320181598|gb|EFW56513.1| 1-deoxy-D-xylulose 5-phosphate synthase [Shigella boydii ATCC 9905] Length = 620 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|169831189|ref|YP_001717171.1| deoxyxylulose-5-phosphate synthase [Candidatus Desulforudis audaxviator MP104C] gi|229813271|sp|B1I3J6|DXS_DESAP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|169638033|gb|ACA59539.1| deoxyxylulose-5-phosphate synthase [Candidatus Desulforudis audaxviator MP104C] Length = 634 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 14/107 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYG---------GHGIVGAQVSLGTGIAFANKYRRS 179 LTGR K + ++ F +GF G G +S G+A A Sbjct: 81 LTGR-----KSQFHTLRQFEGLSGFPNRNESEYDCFGTGHSSTSISAALGMALARDLSGE 135 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ V GDGA + G +E+ N A +I V+ +N+ ++ +V Sbjct: 136 DRNVVAVIGDGALSGGMAFEALNQAGHLGCRLIVVLNDNEMSIARNV 182 >gi|114690648|ref|XP_001139950.1| PREDICTED: hypothetical protein LOC465937 isoform 3 [Pan troglodytes] Length = 543 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 38 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 97 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A + P Sbjct: 98 DVNRLGHSGALHAEHCIDIYQRRCEAFGWNTYVVDGRDVEALCQVFWQA---SQVKHKPT 154 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 155 AVVAKTFKGRG 165 >gi|332861991|ref|XP_003317828.1| PREDICTED: transketolase-like 1 [Pan troglodytes] Length = 593 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 88 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 147 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 148 DVNRLGHSGALHAEHCIDIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 204 Query: 276 IIEMLTYRYRG 286 + T++ RG Sbjct: 205 AVVAKTFKGRG 215 >gi|254518735|ref|ZP_05130791.1| deoxyxylulose-5-phosphate synthase [Clostridium sp. 7_2_43FAA] gi|226912484|gb|EEH97685.1| deoxyxylulose-5-phosphate synthase [Clostridium sp. 7_2_43FAA] Length = 619 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 35/185 (18%), Positives = 64/185 (34%), Gaps = 43/185 (23%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G+A A + D V GDGA G E+ N Sbjct: 107 SKYDAFDTGHS--STSISAALGMARARDIKNEDNQVVAVIGDGALTGGMALEALNDVGFK 164 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTN--------------------------------- 234 +I ++ +NQ ++ +V S N Sbjct: 165 KTKMIVILNDNQMSISPNVGGLSTHLNNLRMEPRYNKLKSNINETLSNSNAGKKLASCIS 224 Query: 235 -FSKRGVSFNIPGMQVDGMDIRAVKA-------TMDKAVAYCRAHKGPIIIEMLTYRYRG 286 F F +P M + M ++ + TM + + + P+II ++T + +G Sbjct: 225 RFKDSIKQFVVPSMLFEDMGLKYIGPINGHDIETMTEVLEKAKQIDEPVIIHVVTSKGKG 284 Query: 287 HSMSD 291 + +++ Sbjct: 285 YELAE 289 >gi|225446170|ref|XP_002271585.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297735326|emb|CBI17766.3| unnamed protein product [Vitis vinifera] Length = 735 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A + + GDGA GQ YE+ N A Sbjct: 193 SIYDAFGAGHS--STSISAGLGMAVGRDLLGKNNHVISVIGDGAMTAGQAYEAMNNAGYL 250 Query: 208 NLNVIYVI-ENNQYAMGTSV 226 + N+I ++ +N Q ++ T+ Sbjct: 251 DSNLIIILNDNGQVSLPTAT 270 >gi|297379571|gb|ADI34458.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori v225d] Length = 616 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 7/116 (6%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH VS+G G+A A +++ + + GDG+ + G YE+ N +I Sbjct: 106 FIAGHS--STSVSIGVGVAKAFCLKQALGMPIALLGDGSISAGIFYEALNELGDRKYPMI 163 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 ++ +N+ ++ T + S + +G P Q ++ + +T+ ++V Y Sbjct: 164 MILNDNEMSISTPIGALSKALSQLMKG-----PFYQSFRSKVKKILSTLPESVNYL 214 >gi|39996863|ref|NP_952814.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens PCA] gi|81702248|sp|Q74CB0|DXS2_GEOSL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName: Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP synthase 2; Short=DXPS 2 gi|39983751|gb|AAR35141.1| deoxyxylulose-5-phosphate synthase [Geobacter sulfurreducens PCA] gi|298505876|gb|ADI84599.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens KN400] Length = 626 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 5/94 (5%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G+A A + V GDG+ G YE N A Sbjct: 107 SPHDVFDAGH--ASTSISAALGLAAARDLAGRNNKVVAVIGDGSMTGGIAYEGLNHAGHL 164 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 N +++ V+ +N+ ++ +V A +NF R V+ Sbjct: 165 NRDLVVVLNDNEMSIAENV---GALSNFLSRTVT 195 >gi|319892361|ref|YP_004149236.1| Transketolase [Staphylococcus pseudintermedius HKU10-03] gi|317162057|gb|ADV05600.1| Transketolase [Staphylococcus pseudintermedius HKU10-03] Length = 661 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 16/135 (11%) Query: 158 GIVGAQVSLGTGIAFANKYRRS---------DKICVVCFGDGAANQGQVYESFNIAALWN 208 G +G ++ G+A A K+ + D V DG +G +E+ ++A Sbjct: 115 GPLGQGFAMSVGMAMAEKHLAAKFNKDIDVVDHYTYVLASDGDLMEGISHEAASLAGHLK 174 Query: 209 LN-VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVA 266 L+ +I + ++N ++ S+A ++ + KR ++ + V DG DI A+ DKA+ Sbjct: 175 LDKLITLYDSNDISLDGEASKAFSE-DIKKRFEAYGWNHILVKDGNDIEAI----DKAIE 229 Query: 267 YCRAHKGPIIIEMLT 281 + GP IIE+ T Sbjct: 230 EAKGQAGPTIIEVKT 244 >gi|310823938|ref|YP_003956296.1| 2-oxoglutarate dehydrogenase, E1 component [Stigmatella aurantiaca DW4/3-1] gi|309397010|gb|ADO74469.1| 2-oxoglutarate dehydrogenase, E1 component [Stigmatella aurantiaca DW4/3-1] Length = 965 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 4/122 (3%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A QG + E+ N++ L ++++ NNQ T + + Sbjct: 365 RTRVMPLLIHGDAAFMGQGVISETLNLSRLKGYETGGTLHIVINNQVGFTTDPHDSRSSI 424 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA 293 + ++P V+G D A Y + K +I+++ YR GH+ D Sbjct: 425 YATAIAQMLDVPVFHVNGDDPEACVHVARLVAEYRQTFKSDAVIDLICYRRYGHNEGDDP 484 Query: 294 NY 295 ++ Sbjct: 485 SF 486 >gi|293392227|ref|ZP_06636561.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952761|gb|EFE02880.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 616 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ + + KGG +H F + + GH +S G GIA A + + + Sbjct: 84 LTGRRDQMPTIRQKGG-LHPFPWRGESEFDVLSVGHS--STSISAGLGIAIAAERENAGR 140 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 141 KTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDNEMSISENV 185 >gi|111074979|gb|ABH04838.1| transketolase N-terminal section [Heliobacillus mobilis] Length = 272 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN-VIYVIE 216 G +G +S G+A A + +S+ GDG +GQV+E+ AA + L+ + ++ Sbjct: 118 GSLGQGISAAVGMALALELDKSEARVWAVLGDGELQEGQVWEAAMAAAHYKLDRLTAFVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N+ + V + + ++ +F +++DG + +++A +A KG P Sbjct: 178 LNKLQIDGPVEKVMSCLPVKEKFEAFGWNVLEIDGHSFEQILDAIEQA----KATKGRPT 233 Query: 276 IIEMLTYRYRGHSM 289 I T + +G S Sbjct: 234 CIVAHTVKGKGVSF 247 >gi|24111798|ref|NP_706308.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella flexneri 2a str. 301] gi|41016962|sp|Q83SG2|DXS_SHIFL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|24050586|gb|AAN42015.1| 1-deoxyxylulose-5-phosphate synthase; flavoprotein [Shigella flexneri 2a str. 301] Length = 620 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|323976099|gb|EGB71192.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli TW10509] gi|324114639|gb|EGC08607.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia fergusonii B253] Length = 620 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|322834066|ref|YP_004214093.1| deoxyxylulose-5-phosphate synthase [Rahnella sp. Y9602] gi|321169267|gb|ADW74966.1| deoxyxylulose-5-phosphate synthase [Rahnella sp. Y9602] Length = 620 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ IS + KGG +H F S + GH LG +A + + Sbjct: 88 LTGRRDRISTIRQKGG-LHPFPWRGESEYDTLSVGHSSTSISAGLGMAVAAEREGKGRRT 146 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 +CV+ GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 147 VCVI--GDGAITAGMAFEAMNHAGDIKPDMLVILNDNEMSISENV 189 >gi|255994614|ref|ZP_05427749.1| 1-deoxy-D-xylulose-5-phosphate synthase [Eubacterium saphenum ATCC 49989] gi|255993327|gb|EEU03416.1| 1-deoxy-D-xylulose-5-phosphate synthase [Eubacterium saphenum ATCC 49989] Length = 616 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH V +SL GIA A + + + + GDGA G YE+ N VI Sbjct: 110 FDTGHSSV--SLSLAQGIAEARRLQNEEGAVIAVIGDGALTGGVAYEAINSIGDRKSKVI 167 Query: 213 YVIENNQYAMGTSVSRASAQTN 234 ++ +N+ ++ + S S+ N Sbjct: 168 MILNDNEMSISPNSSGISSHLN 189 >gi|170680644|ref|YP_001742557.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli SMS-3-5] gi|226740154|sp|B1LJH0|DXS_ECOSM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|170518362|gb|ACB16540.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli SMS-3-5] Length = 620 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|332799891|ref|YP_004461390.1| Transketolase [Tepidanaerobacter sp. Re1] gi|332697626|gb|AEE92083.1| Transketolase [Tepidanaerobacter sp. Re1] Length = 272 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA---LWNLNVIYV 214 G +G V +G G+A + + + V GDG +G ++E+ AA + NL V Sbjct: 115 GSLGNGVGIGLGMALGCRMQDINNYIYVIVGDGEQQEGVIWEAAMAAAKHEVGNLIVFGD 174 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG- 273 NNQ G V+ S+ + + +F+ +DG DI ++K +A+A +A K Sbjct: 175 CNNNQS--GGKVTELSSLYPTADKWRAFHWHVQTIDGHDIDSIK----EAIANAKAVKDQ 228 Query: 274 PIIIEMLTYR 283 P IE T + Sbjct: 229 PSYIECKTVK 238 >gi|330902389|gb|EGH33440.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 218 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 18/71 (25%), Positives = 36/71 (50%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A++ + S++ + GDGA G +E+ N A N++ ++ Sbjct: 126 GVGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVIL 185 Query: 216 ENNQYAMGTSV 226 +N ++ +V Sbjct: 186 NDNDMSISRNV 196 >gi|255523388|ref|ZP_05390357.1| Transketolase domain protein [Clostridium carboxidivorans P7] gi|296184672|ref|ZP_06853083.1| transketolase, thiamine diphosphate binding domain protein [Clostridium carboxidivorans P7] gi|255512846|gb|EET89117.1| Transketolase domain protein [Clostridium carboxidivorans P7] gi|296050454|gb|EFG89877.1| transketolase, thiamine diphosphate binding domain protein [Clostridium carboxidivorans P7] Length = 274 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 6/133 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K + D GDG +G+V+E+ AA + L N+ ++ Sbjct: 117 GSLGQGISAAVGMAIAGKLDKKDYRVYTLLGDGELEEGEVWEASMAAAQYKLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + + + + +F ++VDG + ++KA + KG P Sbjct: 177 YNGLQIDGPCKDVMSAEPIADKFAAFRWNVLEVDGHSFEELIDAIEKA----KTVKGKPT 232 Query: 276 IIEMLTYRYRGHS 288 +I T + +G S Sbjct: 233 MIVCKTIKGKGVS 245 >gi|219870379|ref|YP_002474754.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parasuis SH0165] gi|254782075|sp|B8F3A4|DXS_HAEPS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|219690583|gb|ACL31806.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parasuis SH0165] Length = 615 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 26/172 (15%) Query: 136 ISKGKGGSMHMFSTKNGFYG--------------GHGIVGAQVSLGTGIAFANKYRRSDK 181 I G+ MH K+G + GH +S G GIA A + + + Sbjct: 84 ILTGRRDQMHTIRQKDGLHPFPWREESPFDVLSVGHS--STSISAGLGIAVAAEKENAGR 141 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 V GDGA G +E+ N A + +++ ++ +N+ ++ +V A N R + Sbjct: 142 KTVCVIGDGAITAGMAFEAINHAGSIHTDMLVILNDNEMSISENV---GALNNHLARLFT 198 Query: 242 FNIPGMQVDG-----MDIRAVKATMDKAVAYCRAHKGPI--IIEMLTYRYRG 286 ++ G +G I ++K + K + + P+ + E L + Y G Sbjct: 199 GSLYGTLREGGKKLLSGIPSIKEFVRKTEEHVKGFVSPVGTMFETLGFNYIG 250 >gi|218549920|ref|YP_002383711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia fergusonii ATCC 35469] gi|226740155|sp|B7LMG7|DXS_ESCF3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|218357461|emb|CAQ90100.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia fergusonii ATCC 35469] Length = 620 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|223937924|ref|ZP_03629823.1| Transketolase domain protein [bacterium Ellin514] gi|223893325|gb|EEF59787.1| Transketolase domain protein [bacterium Ellin514] Length = 612 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 1/101 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+G G+A + + D V GDG +G V+E+ ++A + L N++ +++ Sbjct: 117 GSLGQGLSVGVGMALCARLDQLDYRTYVLMGDGECAEGSVWEAASLAGINKLNNLVAIVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N+ + + KR +F +DG D+ + Sbjct: 177 VNRLGQSQPTAFQWDLEVYRKRFEAFGWRTEVIDGHDMEEI 217 >gi|281358211|ref|ZP_06244694.1| deoxyxylulose-5-phosphate synthase [Victivallis vadensis ATCC BAA-548] gi|281315301|gb|EFA99331.1| deoxyxylulose-5-phosphate synthase [Victivallis vadensis ATCC BAA-548] Length = 615 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 67/165 (40%), Gaps = 22/165 (13%) Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G G +S G++ A S V GDGA N G E A+ N+I V Sbjct: 110 GASGHAGTAISTAVGLSAAFGRSGSPHRAVAVVGDGALNCGMSLEGMINASRDGKNLIVV 169 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 + +N+ ++ +V + N G S+N M V R +K T+ + A R K Sbjct: 170 LNDNKMSIQENVGGMAHYLNCLISGSSYNKFKMTVK----RLLK-TLPRHEAIHRFIKRT 224 Query: 275 -----------IIIEMLTYRY----RGHSMSDPANYRTREEINEM 304 I+ E L +RY GHS+ D RT E + E+ Sbjct: 225 EDLLKGIFLPGIVFEQLGFRYIGPINGHSLPD--LLRTLERVREL 267 >gi|82542908|ref|YP_406855.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella boydii Sb227] gi|91209489|ref|YP_539475.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli UTI89] gi|117622681|ref|YP_851594.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli APEC O1] gi|187732272|ref|YP_001879129.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella boydii CDC 3083-94] gi|193065234|ref|ZP_03046307.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli E22] gi|193068686|ref|ZP_03049647.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli E110019] gi|194428815|ref|ZP_03061350.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli B171] gi|194438914|ref|ZP_03070999.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 101-1] gi|218557329|ref|YP_002390242.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli S88] gi|237707586|ref|ZP_04538067.1| 1-deoxyxylulose-5-phosphate synthase [Escherichia sp. 3_2_53FAA] gi|260842618|ref|YP_003220396.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli O103:H2 str. 12009] gi|300903315|ref|ZP_07121243.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 84-1] gi|300918199|ref|ZP_07134806.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 115-1] gi|300924141|ref|ZP_07140133.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 182-1] gi|300930284|ref|ZP_07145697.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 187-1] gi|301301568|ref|ZP_07207703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 124-1] gi|301330718|ref|ZP_07223320.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 78-1] gi|118595580|sp|Q1RFC0|DXS_ECOUT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|118595616|sp|Q325I1|DXS_SHIBS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|166198614|sp|A1A890|DXS_ECOK1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|226740150|sp|B7MD78|DXS_ECO45 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|229836082|sp|B2U4M3|DXS_SHIB3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|81244319|gb|ABB65027.1| 1-deoxyxylulose-5-phosphate synthase [Shigella boydii Sb227] gi|91071063|gb|ABE05944.1| 1-deoxyxylulose-5-phosphate synthase [Escherichia coli UTI89] gi|115511805|gb|ABI99879.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli APEC O1] gi|187429264|gb|ACD08538.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella boydii CDC 3083-94] gi|192927208|gb|EDV81829.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli E22] gi|192958049|gb|EDV88491.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli E110019] gi|194413118|gb|EDX29405.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli B171] gi|194422208|gb|EDX38210.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 101-1] gi|218364098|emb|CAR01763.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli S88] gi|226898796|gb|EEH85055.1| 1-deoxyxylulose-5-phosphate synthase [Escherichia sp. 3_2_53FAA] gi|257757765|dbj|BAI29262.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli O103:H2 str. 12009] gi|294492029|gb|ADE90785.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli IHE3034] gi|300404610|gb|EFJ88148.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 84-1] gi|300414650|gb|EFJ97960.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 115-1] gi|300419594|gb|EFK02905.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 182-1] gi|300461856|gb|EFK25349.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 187-1] gi|300843065|gb|EFK70825.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 124-1] gi|300843379|gb|EFK71139.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 78-1] gi|307628111|gb|ADN72415.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli UM146] gi|315256245|gb|EFU36213.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 85-1] gi|315289865|gb|EFU49255.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 110-3] gi|320186049|gb|EFW60794.1| 1-deoxy-D-xylulose 5-phosphate synthase [Shigella flexneri CDC 796-83] gi|323160473|gb|EFZ46421.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli E128010] gi|323170502|gb|EFZ56152.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli LT-68] gi|323952968|gb|EGB48836.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli H252] gi|323958613|gb|EGB54316.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli H263] gi|323963406|gb|EGB58968.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli H489] gi|323972270|gb|EGB67480.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli TA007] gi|332094574|gb|EGI99620.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella boydii 5216-82] gi|332098638|gb|EGJ03604.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella boydii 3594-74] gi|332341783|gb|AEE55117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli UMNK88] Length = 620 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|309794854|ref|ZP_07689275.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 145-7] gi|308121507|gb|EFO58769.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 145-7] Length = 620 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|331671965|ref|ZP_08372761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli TA280] gi|331070954|gb|EGI42313.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli TA280] Length = 620 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|293408567|ref|ZP_06652406.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli B354] gi|291471745|gb|EFF14228.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli B354] Length = 621 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 89 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 145 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 146 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 190 >gi|331661798|ref|ZP_08362721.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli TA143] gi|284920230|emb|CBG33289.1| 1-deoxyxylulose-5-phosphate synthase [Escherichia coli 042] gi|331060220|gb|EGI32184.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli TA143] Length = 620 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|325498297|gb|EGC96156.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia fergusonii ECD227] Length = 620 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|323965103|gb|EGB60562.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli M863] gi|327254742|gb|EGE66358.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli STEC_7v] Length = 620 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|300722386|ref|YP_003711672.1| 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex, thiamin-binding [Xenorhabdus nematophila ATCC 19061] gi|297628889|emb|CBJ89472.1| 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex, thiamin-binding [Xenorhabdus nematophila ATCC 19061] Length = 935 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A QG V E+ N++ V + ++ NNQ TS + + T + Sbjct: 352 LPVTIHGDAAITGQGVVQETLNMSQARGYEVGGTVRIVVNNQVGFTTSNPKDARSTQYCT 411 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V P V+ D AV A+ + K ++I+++ YR GH+ +D Sbjct: 412 DIVKMVQAPIFHVNTDDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEAD 466 >gi|162139358|ref|YP_687962.2| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella flexneri 5 str. 8401] gi|333008615|gb|EGK28083.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella flexneri VA-6] gi|333010862|gb|EGK30288.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella flexneri K-272] gi|333021361|gb|EGK40614.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella flexneri K-227] Length = 620 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|114798103|ref|YP_760539.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomonas neptunium ATCC 15444] gi|122942403|sp|Q0C154|DXS_HYPNA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|114738277|gb|ABI76402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomonas neptunium ATCC 15444] Length = 640 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 11/119 (9%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTKN-GFYGGHGIVGAQVSLGTGIAFANKYRRSDK----I 182 LTGR+ + + +GG + F+ ++ Y G A S+ G+ FA +K I Sbjct: 87 LTGRKDRMRTLRQGGGLSGFTKRSESEYDPFGAAHASTSISAGLGFAKSRDLQNKDNHVI 146 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 CV+ GDG+ + G YE+ N A +I ++ +N ++ V A +++ R VS Sbjct: 147 CVI--GDGSMSAGMAYEAMNNAGADRSRMIVILNDNDMSIAPPV---GAMSHYFSRLVS 200 >gi|30061914|ref|NP_836085.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella flexneri 2a str. 2457T] gi|30040158|gb|AAP15891.1| 1-deoxyxylulose-5-phosphate synthase; flavoprotein [Shigella flexneri 2a str. 2457T] gi|281599752|gb|ADA72736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella flexneri 2002017] gi|313646963|gb|EFS11420.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella flexneri 2a str. 2457T] gi|332761678|gb|EGJ91957.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella flexneri 2747-71] gi|332764297|gb|EGJ94533.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella flexneri K-671] gi|332768525|gb|EGJ98708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella flexneri 2930-71] gi|333022024|gb|EGK41269.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella flexneri K-304] Length = 620 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|320197142|gb|EFW71759.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli WV_060327] Length = 620 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|331645593|ref|ZP_08346697.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli M605] gi|330910214|gb|EGH38724.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli AA86] gi|331045755|gb|EGI17881.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli M605] Length = 620 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|293413675|ref|ZP_06656324.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli B185] gi|331651355|ref|ZP_08352380.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli M718] gi|291433733|gb|EFF06706.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli B185] gi|331051096|gb|EGI23148.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli M718] Length = 620 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|253774595|ref|YP_003037426.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160486|ref|YP_003043594.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli B str. REL606] gi|242376198|emb|CAQ30889.1| 1-deoxyxylulose-5-phosphate synthase [Escherichia coli BL21(DE3)] gi|253325639|gb|ACT30241.1| deoxyxylulose-5-phosphate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972387|gb|ACT38058.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli B str. REL606] gi|253976597|gb|ACT42267.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli BL21(DE3)] Length = 620 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|149191112|ref|ZP_01869371.1| alpha-ketoglutarate decarboxylase [Vibrio shilonii AK1] gi|148835040|gb|EDL52018.1| alpha-ketoglutarate decarboxylase [Vibrio shilonii AK1] Length = 936 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%) Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK-----ICVVCFGDGA-ANQ 194 GG +H+ F H + V +G+ A + R DK + + GD A A Q Sbjct: 312 GGDVHL---ALAFNPSHLEIVNPVVIGS--VRARQDRLGDKDGRSVLPITIHGDSAIAGQ 366 Query: 195 GQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVD 250 G V E+FN++ V + ++ NNQ TS T + + P V+ Sbjct: 367 GVVAETFNMSQARGFRVGGTVRIVVNNQVGFTTSNPHDMRSTMYCTDISKMVQAPIFHVN 426 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN 294 D AV A+ + ++I+++ YR GH+ +D N Sbjct: 427 ADDPEAVAFVTQIALDFRNEFAKDVVIDLVCYRRHGHNEADEPN 470 >gi|160872403|ref|ZP_02062535.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Rickettsiella grylli] gi|159121202|gb|EDP46540.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Rickettsiella grylli] Length = 929 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 5/117 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A + QG V E+F ++ A ++++ NNQ T A + + Sbjct: 348 LPLLIHGDAAFSGQGVVMENFELSQTQAYGTGGTLHIVLNNQLGFTTDPQNARSSWYCTD 407 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-PA 293 + P V+ D AV + A + + + ++I+++ YR GH+ +D PA Sbjct: 408 PAKMVDAPIFHVNSDDPEAVLFAIQLAFDFRQTFRKDVVIDLVCYRRHGHNEADEPA 464 >gi|82775671|ref|YP_402018.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella dysenteriae Sd197] gi|309787013|ref|ZP_07681625.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella dysenteriae 1617] gi|118595617|sp|Q32JH8|DXS_SHIDS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|81239819|gb|ABB60529.1| 1-deoxyxylulose-5-phosphate synthase [Shigella dysenteriae Sd197] gi|308924591|gb|EFP70086.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella dysenteriae 1617] Length = 620 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|26246426|ref|NP_752465.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli CFT073] gi|218688283|ref|YP_002396495.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli ED1a] gi|218698671|ref|YP_002406300.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli IAI39] gi|227884572|ref|ZP_04002377.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 83972] gi|300988028|ref|ZP_07178508.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 45-1] gi|306813114|ref|ZP_07447307.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli NC101] gi|331656474|ref|ZP_08357436.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli TA206] gi|30315827|sp|Q8FKB9|DXS_ECOL6 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|226740151|sp|B7NJ77|DXS_ECO7I RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|254782074|sp|B7MQD5|DXS_ECO81 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|26106824|gb|AAN79009.1|AE016756_192 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli CFT073] gi|218368657|emb|CAR16396.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli IAI39] gi|218425847|emb|CAR06653.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli ED1a] gi|222032215|emb|CAP74954.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli LF82] gi|227838658|gb|EEJ49124.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 83972] gi|281177590|dbj|BAI53920.1| 1-deoxyxylulose-5-phosphate synthase [Escherichia coli SE15] gi|300407580|gb|EFJ91118.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 45-1] gi|305853877|gb|EFM54316.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli NC101] gi|307552325|gb|ADN45100.1| 1-deoxyxylulose-5-phosphate synthase [Escherichia coli ABU 83972] gi|312944997|gb|ADR25824.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O83:H1 str. NRG 857C] gi|315294201|gb|EFU53552.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 153-1] gi|315299586|gb|EFU58834.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 16-3] gi|323191338|gb|EFZ76601.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli RN587/1] gi|324010098|gb|EGB79317.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 57-2] gi|331054722|gb|EGI26731.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli TA206] Length = 620 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|15800150|ref|NP_286162.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 EDL933] gi|15829728|ref|NP_308501.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. Sakai] gi|168749881|ref|ZP_02774903.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4113] gi|168756961|ref|ZP_02781968.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4401] gi|168761625|ref|ZP_02786632.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4501] gi|168768370|ref|ZP_02793377.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4486] gi|168776275|ref|ZP_02801282.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4196] gi|168783285|ref|ZP_02808292.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4076] gi|168786266|ref|ZP_02811273.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC869] gi|168800302|ref|ZP_02825309.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC508] gi|195938513|ref|ZP_03083895.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4024] gi|208806479|ref|ZP_03248816.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4206] gi|208815074|ref|ZP_03256253.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4045] gi|208822853|ref|ZP_03263171.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4042] gi|209398295|ref|YP_002269065.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4115] gi|217325666|ref|ZP_03441750.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. TW14588] gi|254791604|ref|YP_003076441.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. TW14359] gi|261223901|ref|ZP_05938182.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli O157:H7 str. FRIK2000] gi|261256385|ref|ZP_05948918.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli O157:H7 str. FRIK966] gi|291281327|ref|YP_003498145.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O55:H7 str. CB9615] gi|21263508|sp|Q8XE76|DXS_ECO57 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|226801557|sp|B5Z3S5|DXS_ECO5E RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|12513276|gb|AAG54770.1|AE005221_7 1-deoxyxylulose-5-phosphate synthase; flavoprotein [Escherichia coli O157:H7 str. EDL933] gi|13359931|dbj|BAB33897.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli O157:H7 str. Sakai] gi|187768297|gb|EDU32141.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4196] gi|188015927|gb|EDU54049.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4113] gi|188999404|gb|EDU68390.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4076] gi|189356019|gb|EDU74438.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4401] gi|189362524|gb|EDU80943.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4486] gi|189367974|gb|EDU86390.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4501] gi|189373486|gb|EDU91902.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC869] gi|189377438|gb|EDU95854.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC508] gi|208726280|gb|EDZ75881.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4206] gi|208731722|gb|EDZ80410.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4045] gi|208737046|gb|EDZ84730.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4042] gi|209159695|gb|ACI37128.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. EC4115] gi|209744024|gb|ACI70319.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli] gi|209744026|gb|ACI70320.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli] gi|209744028|gb|ACI70321.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli] gi|209744030|gb|ACI70322.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli] gi|209744032|gb|ACI70323.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli] gi|217321887|gb|EEC30311.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. TW14588] gi|254591004|gb|ACT70365.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli O157:H7 str. TW14359] gi|290761200|gb|ADD55161.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O55:H7 str. CB9615] gi|320192834|gb|EFW67474.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli O157:H7 str. EC1212] gi|320638414|gb|EFX08128.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. G5101] gi|320643794|gb|EFX12917.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H- str. 493-89] gi|320649145|gb|EFX17723.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H- str. H 2687] gi|320656038|gb|EFX23954.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661188|gb|EFX28619.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O55:H7 str. USDA 5905] gi|320665164|gb|EFX32257.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O157:H7 str. LSU-61] gi|326341182|gb|EGD64974.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli O157:H7 str. 1044] gi|326346043|gb|EGD69782.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli O157:H7 str. 1125] Length = 620 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|332185973|ref|ZP_08387719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. S17] gi|332013788|gb|EGI55847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. S17] Length = 641 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + +GG + F+ + + F H +S G A ANK + Sbjct: 87 LTGRRDRIRTIRQGGGLSGFTKRSESEYDPFGAAHS--STSISAALGFAVANKLAGTPGK 144 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDGA + G YE+ N A +I ++ +N ++ V SA Sbjct: 145 GIAVIGDGAMSAGMAYEAMNNAEQAGNRLIVILNDNDMSIAPPVGGLSA 193 >gi|320354499|ref|YP_004195838.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfobulbus propionicus DSM 2032] gi|320123001|gb|ADW18547.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfobulbus propionicus DSM 2032] Length = 635 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 18/68 (26%), Positives = 33/68 (48%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A + D V GDG+ G +E N A N++ ++ +N+ ++ Sbjct: 131 ISYGLGMAAAKAMQEDDSRVVAIIGDGSMTAGMAFEGLNHAGDLGRNLVVILNDNEMSIS 190 Query: 224 TSVSRASA 231 +V S+ Sbjct: 191 KNVGALSS 198 >gi|300937030|ref|ZP_07151896.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 21-1] gi|300457861|gb|EFK21354.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 21-1] Length = 620 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|215485501|ref|YP_002327932.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O127:H6 str. E2348/69] gi|312964558|ref|ZP_07778814.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 2362-75] gi|254782072|sp|B7UJP3|DXS_ECO27 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|215263573|emb|CAS07903.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli O127:H6 str. E2348/69] gi|312290792|gb|EFR18669.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 2362-75] Length = 620 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|71892109|ref|YP_277841.1| 2-oxoglutarate dehydrogenase E1 component [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796215|gb|AAZ40966.1| 2-oxoglutarate dehydrogenase E1 component [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 953 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 5/113 (4%) Query: 184 VVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTS-VSRASAQTNFSKR 238 + GD A + QG V E+FN++ +V +++I NNQ TS + + + + Sbjct: 365 ITIHGDAAISAQGIVQETFNMSKTRAYDVGGTVHIIINNQVGFTTSNIHDIRSTQHCTDI 424 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ ++ AV A+ + K +II+++ YR GH+ +D Sbjct: 425 AKMIQAPIFHVNADNVDAVVYVTRAALNFRSVFKRDVIIDLVCYRRHGHNEAD 477 >gi|320173762|gb|EFW48945.1| 1-deoxy-D-xylulose 5-phosphate synthase [Shigella dysenteriae CDC 74-1112] Length = 620 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|301049621|ref|ZP_07196572.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 185-1] gi|300298614|gb|EFJ54999.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 185-1] Length = 620 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|262341167|ref|YP_003284022.1| transketolase N-terminal subunit [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272504|gb|ACY40412.1| transketolase N-terminal subunit [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 287 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 4/127 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRS-DKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S+ G A + K + I GDG N+GQ++ES A N+ N I I Sbjct: 118 GSLGQGMSVAVGAALSKKLNKEFHNIIYSLHGDGELNEGQIWESVLYAGARNIDNYIATI 177 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM-QVDGMDIRAVKATMDKAVAYCRAHKGP 274 + N + + N K+ SF+ + +++G +I V + KA K P Sbjct: 178 DYNGQQIDGTTDEVLPLGNLKKKFESFDWKVLEELEGNNIEKVIDVLKKAKNETGKGK-P 236 Query: 275 IIIEMLT 281 ++I + T Sbjct: 237 VLIILYT 243 >gi|229918256|ref|YP_002886902.1| 2-oxoglutarate dehydrogenase E1 component [Exiguobacterium sp. AT1b] gi|259515354|sp|C4L3W2|ODO1_EXISA RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|229469685|gb|ACQ71457.1| 2-oxoglutarate dehydrogenase, E1 subunit [Exiguobacterium sp. AT1b] Length = 951 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 12/178 (6%) Query: 183 CVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ GD A QG V E+ N+ L ++VI NN T + + + S Sbjct: 351 SILIHGDAAFPGQGIVAETLNMTNLTGYRTGGTVHVIANNTIGFTTDPNDSRSTRYASDI 410 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA--HKGPIIIEMLTYRYRGHS-MSDPANY 295 + IP V+ D A A K ++ RA HK I+++++ YR GH+ M +P N Sbjct: 411 AKGYEIPVFHVNADDPEACVAVA-KLISEYRAKFHKD-ILVDLIGYRRYGHNEMDEPMN- 467 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK-EIEMNVRKIINNSVEFAQSDKE 352 T + + H + V L + D K +IE + + + + + S++E Sbjct: 468 -TNPVLYKAIKGHQSVRHVYAARLEEEGVMTKDEKAQIEQKIEEALKAARDLVPSEEE 524 >gi|157158400|ref|YP_001461602.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli E24377A] gi|157159941|ref|YP_001457259.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli HS] gi|170021208|ref|YP_001726162.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli ATCC 8739] gi|188496009|ref|ZP_03003279.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 53638] gi|191166749|ref|ZP_03028576.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli B7A] gi|209917633|ref|YP_002291717.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli SE11] gi|218552983|ref|YP_002385896.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli IAI1] gi|256020387|ref|ZP_05434252.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella sp. D9] gi|260853640|ref|YP_003227531.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli O26:H11 str. 11368] gi|260866578|ref|YP_003232980.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli O111:H- str. 11128] gi|300820341|ref|ZP_07100493.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 119-7] gi|307312205|ref|ZP_07591841.1| deoxyxylulose-5-phosphate synthase [Escherichia coli W] gi|312970515|ref|ZP_07784696.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 1827-70] gi|331676087|ref|ZP_08376799.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli H591] gi|332281566|ref|ZP_08393979.1| 1-deoxyxylulose-5-phosphate synthase thiamine-requiring FAD-requiring [Shigella sp. D9] gi|166920139|sp|A7ZIH3|DXS_ECO24 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|166920140|sp|A7ZX72|DXS_ECOHS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|189027774|sp|B1J029|DXS_ECOLC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|226740152|sp|B7M3Q9|DXS_ECO8A RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|226801558|sp|B6HZM1|DXS_ECOSE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|157065621|gb|ABV04876.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli HS] gi|157080430|gb|ABV20138.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli E24377A] gi|169756136|gb|ACA78835.1| deoxyxylulose-5-phosphate synthase [Escherichia coli ATCC 8739] gi|188491208|gb|EDU66311.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 53638] gi|190903260|gb|EDV62982.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli B7A] gi|209910892|dbj|BAG75966.1| 1-deoxyxylulose-5-phosphate synthase [Escherichia coli SE11] gi|218359751|emb|CAQ97292.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli IAI1] gi|257752289|dbj|BAI23791.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli O26:H11 str. 11368] gi|257762934|dbj|BAI34429.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli O111:H- str. 11128] gi|300527126|gb|EFK48195.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 119-7] gi|306907707|gb|EFN38209.1| deoxyxylulose-5-phosphate synthase [Escherichia coli W] gi|310337164|gb|EFQ02302.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 1827-70] gi|315059697|gb|ADT74024.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli W] gi|320201661|gb|EFW76237.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli EC4100B] gi|323152112|gb|EFZ38405.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli EPECa14] gi|323178317|gb|EFZ63895.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 1180] gi|323379737|gb|ADX52005.1| deoxyxylulose-5-phosphate synthase [Escherichia coli KO11] gi|324016724|gb|EGB85943.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 117-3] gi|324116904|gb|EGC10817.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli E1167] gi|331076145|gb|EGI47427.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli H591] gi|332103918|gb|EGJ07264.1| 1-deoxyxylulose-5-phosphate synthase thiamine-requiring FAD-requiring [Shigella sp. D9] Length = 620 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|331681813|ref|ZP_08382446.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli H299] gi|331081015|gb|EGI52180.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli H299] Length = 620 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|291616728|ref|YP_003519470.1| SucA [Pantoea ananatis LMG 20103] gi|291151758|gb|ADD76342.1| SucA [Pantoea ananatis LMG 20103] gi|327393154|dbj|BAK10576.1| 2-oxoglutarate dehydrogenase E1 component SucA [Pantoea ananatis AJ13355] Length = 935 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 5/156 (3%) Query: 182 ICVVCFGDGAA-NQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+ N++ V + ++ NNQ TS + + T + + Sbjct: 352 LPITIHGDAAVIGQGVVQETLNMSQARGYEVGGTVRIVINNQVGFTTSNPKDARSTPYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 G P V+ D AV A+ Y K + I+++ YR GH+ +D + Sbjct: 412 DIGKMVLAPIFHVNADDPEAVAFVTRLALDYRNTFKRDVFIDLVCYRRHGHNEADEPSAT 471 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +++ + P + RL AS+ D E+ Sbjct: 472 QPLMYQKIKKHPTPRKIYADRLEGEGVASQEDATEM 507 >gi|325925094|ref|ZP_08186514.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas perforans 91-118] gi|78036750|emb|CAJ24443.1| 1-deoxy-D-xylulose 5-phosphate synthase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325544510|gb|EGD15873.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas perforans 91-118] Length = 651 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ I K K G + Y G+ +S G+A A + D+ V Sbjct: 100 LTGRRDQIHTVKQKDGVAPFPKREESIYDTFGVGHSSTSISAALGMAIAAQRNGDDRKVV 159 Query: 185 VCFGDGAANQGQVYESFNIAALWN--LNVIYVIENNQYAMGTSV 226 GDGA G VYE+ N A + N++ ++ +N+ ++ +V Sbjct: 160 AVIGDGAMTAGMVYEALNHAGGMDPEPNLLVILNDNRMSISEAV 203 >gi|191173517|ref|ZP_03035044.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli F11] gi|300997393|ref|ZP_07181733.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 200-1] gi|190906226|gb|EDV65838.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli F11] gi|300304212|gb|EFJ58732.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 200-1] gi|324010680|gb|EGB79899.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 60-1] Length = 620 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|315452712|ref|YP_004072982.1| 1-deoxyxylulose-5-phosphate synthase [Helicobacter felis ATCC 49179] gi|315131764|emb|CBY82392.1| 1-deoxyxylulose-5-phosphate synthase [Helicobacter felis ATCC 49179] Length = 619 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 52/263 (19%), Positives = 104/263 (39%), Gaps = 67/263 (25%) Query: 79 GGFCHLCIGQEAVIVGMKMSLTEGDQ----MITAYREHGHILACG-VDASKIMAELTGRQ 133 GG +G +IVG+ S+ + D+ T+++ + H L G +A + ++ G Sbjct: 39 GGHLSSSLGATELIVGLH-SVFDKDKHPFIFDTSHQAYAHKLLTGRFEAFDTLRQIHGLS 97 Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 G + S + F GH +S+G G+A A ++ VV GDG+ + Sbjct: 98 GFCRPSE-------SIYDYFIAGHS--STAISVGVGVAKAYALAGKTEVPVVVVGDGSLS 148 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGT---SVSRASAQ------------------ 232 G YE+ N ++ ++ +N+ ++ ++S A +Q Sbjct: 149 AGLAYEALNELGDRKYPLVILLNDNEMSIAKPIGAISNALSQLMARPLYQSFRDKIKAIL 208 Query: 233 ------------------------TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 F + G+S+ P +DG D+ A+ +A+ Sbjct: 209 KSMPEGVNYLANRFEESFKLITPGIFFEELGISYMGP---IDGHDLEAIV----QALKLA 261 Query: 269 RAHKGPIIIEMLTYRYRGHSMSD 291 + KGP++I T + +G+ +++ Sbjct: 262 KETKGPMLIHAQTTKGKGYKIAE 284 >gi|291617101|ref|YP_003519843.1| TktB [Pantoea ananatis LMG 20103] gi|291152131|gb|ADD76715.1| TktB [Pantoea ananatis LMG 20103] gi|327393546|dbj|BAK10968.1| putative transketolase N-terminal section TktB [Pantoea ananatis AJ13355] Length = 276 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 1/107 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K S + V GDG +G +E+ +AA + L N+I + + Sbjct: 121 GALGHGLPVAVGIALAAKKSNSRRRIFVVTGDGELAEGSNWEAALVAAHYGLDNLIVIND 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 N+ + S +++ +F + + G D+ +V + +++ Sbjct: 181 KNKLQLAGSTRDIMNTDPLAEKWRAFGLAVSECQGNDMASVVSALEQ 227 >gi|225378764|ref|ZP_03755985.1| hypothetical protein ROSEINA2194_04434 [Roseburia inulinivorans DSM 16841] gi|225209393|gb|EEG91747.1| hypothetical protein ROSEINA2194_04434 [Roseburia inulinivorans DSM 16841] Length = 278 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 14/138 (10%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW-----NLNVI 212 G +G +S+ G+A KY + D GDG +GQ++E AA+W N++ Sbjct: 115 GSLGQGLSVAVGMAAVGKYDKKDYRVYTLCGDGEIQEGQIWE----AAMWAGFKKLDNLV 170 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 V++NN + +V + K+ +FN + +DG D ++A +A R K Sbjct: 171 VVVDNNNLQIDGAVDEVCSPYPIDKKFEAFNFHVINIDGNDFDQIRAAFKEA----RETK 226 Query: 273 G-PIIIEMLTYRYRGHSM 289 G P I T + +G S Sbjct: 227 GMPTAIIAKTVKGKGVSF 244 >gi|194469664|ref|ZP_03075648.1| transketolase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205358385|ref|ZP_02655770.2| transketolase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194456028|gb|EDX44867.1| transketolase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205334811|gb|EDZ21575.1| transketolase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 281 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 3/125 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + S DG ++G +E+ AA + L N+I +++ Sbjct: 118 GSLGQGLSIAVGMALGLKQKSSTSWVYNSMSDGELDEGSTWEAAMSAAHYGLTNLINIVD 177 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 N Q A G S + ++ +F +VDG D+ AV A D A ++ I Sbjct: 178 VNKQQADGDS-RKILGFEPLHEKWAAFGWYVQRVDGNDLAAVIAAFDNAKSHAGNQPRVI 236 Query: 276 IIEML 280 + + L Sbjct: 237 LCDTL 241 >gi|161614935|ref|YP_001588900.1| hypothetical protein SPAB_02689 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|195874056|ref|ZP_02700275.2| transketolase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205357026|ref|ZP_02344254.2| transketolase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|161364299|gb|ABX68067.1| hypothetical protein SPAB_02689 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|195630983|gb|EDX49569.1| transketolase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205324596|gb|EDZ12435.1| transketolase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 281 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 9/124 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + S DG ++G +E+ AA + L N+I +++ Sbjct: 118 GSLGQGLSIAVGMALGLKQKSSTSWVYNSMSDGELDEGSTWEAAMSAAHYGLTNLINIVD 177 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-- 273 N Q A G S + ++ +F +VDG D+ AV A D A ++H G Sbjct: 178 VNKQQADGDS-RKILGFEPLHEKWAAFGWYVQRVDGNDLAAVIAAFDNA----KSHTGNQ 232 Query: 274 PIII 277 P +I Sbjct: 233 PRVI 236 >gi|10178920|emb|CAC08458.1| 1-D-desoxyxylulose 5-phosphate synthase (DXS) [Narcissus pseudonarcissus] Length = 709 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A + GDG GQ YE+ N Sbjct: 169 SVHDAFGAGHS--STSISAGLGMAVARDLLGKSNHVISVIGDGVMTAGQAYEAMNNVGYL 226 Query: 208 NLNVIYVIENNQ 219 + N+I V+ +N+ Sbjct: 227 DSNLIVVLNDNK 238 >gi|238913383|ref|ZP_04657220.1| hypothetical protein SentesTe_19961 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 279 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 3/125 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A K + S DG ++G +E+ AA + L N+I +++ Sbjct: 116 GSLGQGLSIAVGMALGLKQKSSTSWVYNSMSDGELDEGSTWEAAMSAAHYGLTNLINIVD 175 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 N Q A G S + ++ +F +VDG D+ AV A D A ++ I Sbjct: 176 VNKQQADGDS-RKILGFEPLHEKWAAFGWYVQRVDGNDLAAVIAAFDNAKSHAGNQPRVI 234 Query: 276 IIEML 280 + + L Sbjct: 235 LCDTL 239 >gi|110640681|ref|YP_668409.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 536] gi|118595579|sp|Q0TKM1|DXS_ECOL5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|110342273|gb|ABG68510.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli 536] Length = 620 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|110597141|ref|ZP_01385430.1| Transketolase-like [Chlorobium ferrooxidans DSM 13031] gi|110341332|gb|EAT59797.1| Transketolase-like [Chlorobium ferrooxidans DSM 13031] Length = 268 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 10/168 (5%) Query: 137 SKGKGGSM---HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 S G+ GS+ H G G +G + G GIA A ++ V DG N Sbjct: 88 SYGRAGSLLEEHPSPKLEGVEAATGSLGHGLPCGCGIALAGHIKKEQYRTFVLMSDGECN 147 Query: 194 QGQVYESFNIAALWNLNVI--YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 +G V+E+ AA L + +V N A G S A + +F ++DG Sbjct: 148 EGSVWEASMFAAANRLGALCAFVDFNKWQATGRS-REVLALDPLVDKFRAFGWEVHEIDG 206 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYRTR 298 D + + ++ + V+ R + P ++ T + +G S M D N+ R Sbjct: 207 HDHQQILQSV-QDVSPSR--QKPTMVVAHTVKGKGVSFMEDDNNWHYR 251 >gi|294635304|ref|ZP_06713802.1| 1-deoxy-D-xylulose-5-phosphate synthase [Edwardsiella tarda ATCC 23685] gi|291091313|gb|EFE23874.1| 1-deoxy-D-xylulose-5-phosphate synthase [Edwardsiella tarda ATCC 23685] Length = 621 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 58/218 (26%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ I+ + KGG +H F ++ GH +S G G+A A + + Sbjct: 88 LTGRRDRIATIRQKGG-LHPFPWRDESEYDVLSVGHS--STSISAGLGMAVAAEREGEGR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS---AQTNFSKR 238 V GDGA G +E+ N A +++ V+ +N+ ++ +V + AQ K Sbjct: 145 RTVCVIGDGAMTAGMAFEAMNHAGDIKADMLVVLNDNEMSISENVGALNNHLAQLLSGKL 204 Query: 239 GVSFN----------------------------IPGM-----------QVDGMDIRAVKA 259 S +PG VDG D++A+ A Sbjct: 205 YASLREGGKKVLSGLPPIKELVKRTEEHLKGMVVPGTLFEELGFNYIGPVDGHDVQALVA 264 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 T+ R KGP ++ ++T + +G++ + DP ++ Sbjct: 265 TLKN----MRDLKGPQLLHIMTKKGKGYAPAEKDPISW 298 >gi|289192966|ref|YP_003458907.1| Transketolase [Methanocaldococcus sp. FS406-22] gi|288939416|gb|ADC70171.1| Transketolase [Methanocaldococcus sp. FS406-22] Length = 270 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S G+A K + + V GDG +G V+E+ AA + L N+I ++ Sbjct: 114 GSLGQGFSASVGMALGCKLDKLNNYVYVLLGDGECQEGIVWEAAMAAAHYKLDNLIAFVD 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N+ + + + + +F ++DG + + T++KA Sbjct: 174 RNKLQIDGCTEDVMSLGDLKAKFEAFGWDVFEIDGHNFEEIINTVEKA 221 >gi|218693880|ref|YP_002401547.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 55989] gi|293418487|ref|ZP_06660922.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli B088] gi|300818255|ref|ZP_07098466.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 107-1] gi|254782073|sp|B7L654|DXS_ECO55 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|218350612|emb|CAU96304.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli 55989] gi|291325015|gb|EFE64430.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli B088] gi|300529146|gb|EFK50208.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 107-1] gi|323184754|gb|EFZ70125.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 1357] Length = 620 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|323700416|ref|ZP_08112328.1| deoxyxylulose-5-phosphate synthase [Desulfovibrio sp. ND132] gi|323460348|gb|EGB16213.1| deoxyxylulose-5-phosphate synthase [Desulfovibrio desulfuricans ND132] Length = 633 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 19/167 (11%) Query: 101 EGDQMI--TAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG-G 156 E D+++ ++ + H L G DA + + + +GGIS G M + +G G Sbjct: 70 ERDKLVWDVGHQAYAHKLLTGRADAFETLRQ----KGGIS----GFPRMAESPYDHFGVG 121 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 H +S G+A A + D V GDG+ G +E N A ++ V+ Sbjct: 122 HS--STSISAALGMAMARDLKGEDHEVVAVIGDGSLTAGLAFEGLNQAGDLGRKMVVVLN 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 +N+ ++ +V A + F R P +Q D+ + AT+ K Sbjct: 180 DNEMSISKNV---GALSQFLSR--KMTTPFLQRLKSDVEGLLATIPK 221 >gi|218515462|ref|ZP_03512302.1| putative transketolase protein, N-terminal subunit [Rhizobium etli 8C-3] Length = 219 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 9/105 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K ++S F DG ++G +E+ A + L N+I +++ Sbjct: 119 GSLGHGLGIAVGMALALKRKKSSSFVYNLFSDGELDEGSTWEAAMSAGSYRLDNLIGIVD 178 Query: 217 NNQYAMGTSVSRAS-AQTNFSKRGVSFNIPGM---QVDGMDIRAV 257 NQ R S NF G F G +VDG DI A+ Sbjct: 179 VNQ----MPADRPSIGVLNFEPLGPKFEAFGWFVQRVDGNDIDAL 219 >gi|170576173|ref|XP_001893528.1| transketolase [Brugia malayi] gi|158600421|gb|EDP37642.1| transketolase, putative [Brugia malayi] Length = 622 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 2/99 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G +S G+A+A KY + V C GDG +G V+E+ A+ + L N++ ++ Sbjct: 117 GSLGQGLSCAAGMAYAGKYIDNASYRVYCLLGDGECAEGSVWEAAAFASYYKLDNLVAIV 176 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + N+ +KR SF + V+G ++ Sbjct: 177 DMNRLGQTQQTMLGHDADAMAKRFESFGCHTVVVNGCNV 215 >gi|89891010|ref|ZP_01202518.1| transketolase, N-terminal subunit [Flavobacteria bacterium BBFL7] gi|89516654|gb|EAS19313.1| transketolase, N-terminal subunit [Flavobacteria bacterium BBFL7] Length = 281 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 3/126 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G A K DK GDG +GQ++E+ A+ + N+I I+ Sbjct: 118 GSLGQGMSVAIGAAQVKKLNGDDKTVFTLHGDGELQEGQIWEAAMYASANKVDNLISTID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD-GMDIRAVKATMDKAVAYCRAHKGPI 275 N + S + A + + +F + V+ G D+ A+ M +A+ R K P+ Sbjct: 178 VNGQQIDGSTEQVLALGDLRNKFEAFGWDVITVEKGNDVDAIITGMKEAMNLTRKGK-PV 236 Query: 276 IIEMLT 281 I + T Sbjct: 237 CILLHT 242 >gi|113461048|ref|YP_719115.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus somnus 129PT] gi|123132106|sp|Q0I3G1|DXS_HAES1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|112823091|gb|ABI25180.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus somnus 129PT] Length = 617 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ +S + KGG +H F + + GH +S G GIA A + + Sbjct: 84 LTGRRDKMSTIRQKGG-LHPFPWREESEFDVLSVGHS--STSISAGLGIAIAAQKENLGR 140 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 141 KTICVIGDGAITAGMAFEALNHAGSVHTDMLVILNDNEMSISENV 185 >gi|312793470|ref|YP_004026393.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180610|gb|ADQ40780.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 616 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 14/107 (13%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GG+S +F + F GH +S+ G A A + Sbjct: 81 LTGRKQKFNTLRKFGGLSGFPKSKESIFDS---FDTGHS--STSISVALGFAVARDLEKE 135 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + + GDGA G YE N A +N ++ V+ +N ++ +V Sbjct: 136 NHNVIAVIGDGALTGGLAYEGLNNAGRYNGKLLVVLNDNDMSISKNV 182 >gi|221195343|ref|ZP_03568399.1| 1-deoxy-d-xylulose-5-phosphate synthase 1 [Atopobium rimae ATCC 49626] gi|221185246|gb|EEE17637.1| 1-deoxy-d-xylulose-5-phosphate synthase 1 [Atopobium rimae ATCC 49626] Length = 589 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G VSL G+A A R + + GDG+ + G+ E N+A + N I V + Sbjct: 113 GHTSTSVSLALGLAKARDLRGGHENIIAVIGDGSMSGGEALEGLNVAGELDSNFIVVFND 172 Query: 218 NQYAM 222 NQ ++ Sbjct: 173 NQRSI 177 >gi|170717622|ref|YP_001784703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus somnus 2336] gi|189027776|sp|B0UUA4|DXS_HAES2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|168825751|gb|ACA31122.1| deoxyxylulose-5-phosphate synthase [Haemophilus somnus 2336] Length = 617 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ +S + KGG +H F + + GH +S G GIA A + + Sbjct: 84 LTGRRDKMSTIRQKGG-LHPFPWREESEFDVLSVGHS--STSISAGLGIAIAAQKENLGR 140 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 + GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 141 KTICVIGDGAITAGMAFEALNHAGSVHTDMLVILNDNEMSISENV 185 >gi|238753050|ref|ZP_04614505.1| Transketolase subunit A [Yersinia rohdei ATCC 43380] gi|238708728|gb|EEQ00991.1| Transketolase subunit A [Yersinia rohdei ATCC 43380] Length = 276 Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust. Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K S + V GDG +G +E+ +AA + L N+I + + Sbjct: 121 GALGHGLPVAVGIALAAKQANSKRRVFVLTGDGELAEGSNWEAALVAAHYQLDNLIIIND 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N+ + + +++ +F + + G ++++V T++ Sbjct: 181 KNKLQLAGTTQSIMNTDPLAEKWQAFGLQVTECQGNNMQSVVETLE 226 >gi|255658172|ref|ZP_05403581.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mitsuokella multacida DSM 20544] gi|260849480|gb|EEX69487.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mitsuokella multacida DSM 20544] Length = 629 Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 8/108 (7%) Query: 129 LTGRQGGIS--KGKGG----SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ S + KGG S + F GH +LG +A K ++ I Sbjct: 82 LTGRRDAFSTLRKKGGITGFPNRFESAYDAFGVGHASTSISAALGMALARDAKGEKNQVI 141 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 V+ GDGA G+ +E+ N A +I ++ +N+ ++ +V S Sbjct: 142 AVI--GDGALTGGESFEALNNAGDLGTKLIVILNDNEMSIDANVGAMS 187 >gi|162138534|ref|YP_364495.2| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|118595631|sp|Q3BRW8|DXS_XANC5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS Length = 638 Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ I K K G + Y G+ +S G+A A + D+ V Sbjct: 87 LTGRRDQIHTVKQKDGVAPFPKREESIYDTFGVGHSSTSISAALGMAIAAQRNGDDRKVV 146 Query: 185 VCFGDGAANQGQVYESFNIAALWN--LNVIYVIENNQYAMGTSV 226 GDGA G VYE+ N A + N++ ++ +N+ ++ +V Sbjct: 147 AVIGDGAMTAGMVYEALNHAGGMDPEPNLLVILNDNRMSISEAV 190 >gi|327265917|ref|XP_003217754.1| PREDICTED: transketolase-like [Anolis carolinensis] Length = 627 Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 8/131 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVC-FGDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG ++G V+E+ A + L N++ ++ Sbjct: 123 GSLGQGLGAACGMAYNGKYFDRSSYRVYCVLGDGELSEGSVWEAMAFAGFYKLDNLVAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ + KR +F + VDG + + A+ +A P Sbjct: 183 DINRLGQSEPAPLQHHVEIYQKRCEAFGWHAIIVDGHSVEEL------CKAFGQARHQPT 236 Query: 276 IIEMLTYRYRG 286 I T++ +G Sbjct: 237 AIIAKTFKGKG 247 >gi|295698396|ref|YP_003603051.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Riesia pediculicola USDA] gi|291157019|gb|ADD79464.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Riesia pediculicola USDA] Length = 619 Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust. Identities = 49/249 (19%), Positives = 97/249 (38%), Gaps = 65/249 (26%) Query: 130 TGRQG---GISKGKGGSMHMFSTKNGFYG--------------GHGIVGAQVSLGTGIAF 172 TG Q I G+ MH K+G + GH V LG IA Sbjct: 85 TGHQSYPHKILTGRRDKMHTIRKKDGLHPFPWREESEYDILSVGHSSTSISVGLGLSIAA 144 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYA----------- 221 + + ICV+ GDGA G +E+ N +++ ++ +N+ + Sbjct: 145 KKEGKNRKTICVI--GDGAMTSGIAFEAINHVGFIKEDLLIILNDNKMSISNNTGALHET 202 Query: 222 -MGTSVSRASAQTN---------------------FSKRGVSFNIPGMQVDGMDIRAVKA 259 +G + S + N F G+++ P ++G D+ + Sbjct: 203 LLGETKYYQSKKFNQVLEKEEKFVSNSLKRRSRNFFRSLGLNYFGP---IEGNDVYHLIR 259 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGH--SMSDPANYRTREEINEMRSNHDPIEQVRKR 317 T++ Y + +GP ++ ++T + G+ + DP + + N +++ + I++ +K+ Sbjct: 260 TIE----YLKKRRGPKLLHIITKKGNGYLPAEKDPILWHCVPQFN-LKNANKSIKRNKKK 314 Query: 318 L---LHNKW 323 + L KW Sbjct: 315 MFSDLFGKW 323 >gi|145630746|ref|ZP_01786524.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae R3021] gi|144983628|gb|EDJ91088.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae R3021] Length = 313 Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust. Identities = 18/69 (26%), Positives = 35/69 (50%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G +S G GIA A + + + V GDGA G +E+ N A + +++ ++ + Sbjct: 117 GHSSTSISAGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILND 176 Query: 218 NQYAMGTSV 226 N+ ++ +V Sbjct: 177 NEMSISENV 185 >gi|110613990|gb|ABF02657.1| 1-deoxyxylulose-5-phosphate synthase [Shigella flexneri 5 str. 8401] Length = 598 Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 66 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 122 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 123 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 167 >gi|21435729|gb|AAM53953.1|AF514840_1 1-D-deoxyxylulose 5-phosphate synthase [Forsythia x intermedia] Length = 185 Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ MH NG G G G +S G G+A + Sbjct: 6 ILTGRRDKMHTLRQTNGLSGFTKRSESDYDCFGAGHSSTTISAGLGMAVGRDLKGRKNNV 65 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ Y + N A + ++I ++ +N+ Sbjct: 66 VAVIGDGAMTAGQAYGAMNNAGYLDSDMIVILNDNK 101 >gi|45440229|ref|NP_991768.1| putative N-terminal region of transketolase [Yersinia pestis biovar Microtus str. 91001] gi|51595166|ref|YP_069357.1| N-terminal region of transketolase [Yersinia pseudotuberculosis IP 32953] gi|108808821|ref|YP_652737.1| transketolase subunit [Yersinia pestis Antiqua] gi|108810944|ref|YP_646711.1| transketolase subunit [Yersinia pestis Nepal516] gi|145600301|ref|YP_001164377.1| transketolase subunit [Yersinia pestis Pestoides F] gi|153997639|ref|ZP_02022739.1| putative N-terminal region of transketolase [Yersinia pestis CA88-4125] gi|162420555|ref|YP_001605478.1| putative transketolase. N-terminal subunit [Yersinia pestis Angola] gi|165925823|ref|ZP_02221655.1| putative transketolase. N-terminal subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165936788|ref|ZP_02225355.1| putative transketolase. N-terminal subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166010150|ref|ZP_02231048.1| putative transketolase. N-terminal subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166213060|ref|ZP_02239095.1| putative transketolase. N-terminal subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167399236|ref|ZP_02304760.1| putative transketolase. N-terminal subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421537|ref|ZP_02313290.1| putative transketolase. N-terminal subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423806|ref|ZP_02315559.1| putative transketolase. N-terminal subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467636|ref|ZP_02332340.1| putative transketolase. N-terminal subunit [Yersinia pestis FV-1] gi|170025598|ref|YP_001722103.1| transketolase domain-containing protein [Yersinia pseudotuberculosis YPIII] gi|186894180|ref|YP_001871292.1| transketolase domain-containing protein [Yersinia pseudotuberculosis PB1/+] gi|218930335|ref|YP_002348210.1| putative N-terminal region of transketolase [Yersinia pestis CO92] gi|229838936|ref|ZP_04459095.1| transketolase-like protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896416|ref|ZP_04511584.1| transketolase-like protein [Yersinia pestis Pestoides A] gi|229899503|ref|ZP_04514644.1| transketolase-like protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901160|ref|ZP_04516283.1| transketolase-like protein [Yersinia pestis Nepal516] gi|270489343|ref|ZP_06206417.1| transketolase, thiamine diphosphate binding domain protein [Yersinia pestis KIM D27] gi|294505026|ref|YP_003569088.1| putative N-terminal region of transketolase [Yersinia pestis Z176003] gi|45435085|gb|AAS60645.1| putative N-terminal region of transketolase [Yersinia pestis biovar Microtus str. 91001] gi|51588448|emb|CAH20056.1| putative N-terminal region of transketolase [Yersinia pseudotuberculosis IP 32953] gi|108774592|gb|ABG17111.1| transketolase subunit A [Yersinia pestis Nepal516] gi|108780734|gb|ABG14792.1| transketolase subunit A [Yersinia pestis Antiqua] gi|115348946|emb|CAL21905.1| putative N-terminal region of transketolase [Yersinia pestis CO92] gi|145211997|gb|ABP41404.1| transketolase subunit A [Yersinia pestis Pestoides F] gi|149289276|gb|EDM39356.1| putative N-terminal region of transketolase [Yersinia pestis CA88-4125] gi|162353370|gb|ABX87318.1| putative transketolase. N-terminal subunit [Yersinia pestis Angola] gi|165915437|gb|EDR34047.1| putative transketolase. N-terminal subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165922435|gb|EDR39612.1| putative transketolase. N-terminal subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165991057|gb|EDR43358.1| putative transketolase. N-terminal subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166205847|gb|EDR50327.1| putative transketolase. N-terminal subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166960456|gb|EDR56477.1| putative transketolase. N-terminal subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051740|gb|EDR63148.1| putative transketolase. N-terminal subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057976|gb|EDR67722.1| putative transketolase. N-terminal subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752132|gb|ACA69650.1| Transketolase domain protein [Yersinia pseudotuberculosis YPIII] gi|186697206|gb|ACC87835.1| Transketolase domain protein [Yersinia pseudotuberculosis PB1/+] gi|229681885|gb|EEO77978.1| transketolase-like protein [Yersinia pestis Nepal516] gi|229686995|gb|EEO79070.1| transketolase-like protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695302|gb|EEO85349.1| transketolase-like protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700490|gb|EEO88521.1| transketolase-like protein [Yersinia pestis Pestoides A] gi|262363089|gb|ACY59810.1| putative N-terminal region of transketolase [Yersinia pestis D106004] gi|262367016|gb|ACY63573.1| putative N-terminal region of transketolase [Yersinia pestis D182038] gi|270337847|gb|EFA48624.1| transketolase, thiamine diphosphate binding domain protein [Yersinia pestis KIM D27] gi|294355485|gb|ADE65826.1| putative N-terminal region of transketolase [Yersinia pestis Z176003] Length = 276 Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust. Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K S + V GDG +G +E+ +AA + L N++ + + Sbjct: 121 GALGHGLPVAVGIALAAKRANSKRRVFVLTGDGELAEGSNWEAALVAAHYQLDNLVIIND 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N+ + + + + +F + + G D+++V T++ Sbjct: 181 KNKLQLAGTTKSIMNTDPLADKWRAFGLQVTECRGNDMQSVVETLE 226 >gi|331666769|ref|ZP_08367643.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli TA271] gi|331065993|gb|EGI37877.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli TA271] Length = 544 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 12 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 68 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 69 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 113 >gi|310799871|gb|EFQ34764.1| transketolase [Glomerella graminicola M1.001] Length = 732 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 12/119 (10%) Query: 158 GIVGAQVSLGTGIAFANK-----YRRS-----DKICVVCFGDGAANQGQVYESFNIAALW 207 G +G ++ G+A A K Y R D + GD +G E+ +A W Sbjct: 151 GPLGQGIANAVGLAVATKHLAATYNRPNFPVVDNMTWCMIGDACLQEGVAMEAIQLAGHW 210 Query: 208 NLNVIYVI-ENNQYAMGTSVSRASAQ-TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 LN + V+ +NNQ SV + + N R +++ ++ D+ + MDKA Sbjct: 211 RLNNLVVMYDNNQVTCDGSVDLCNTEDVNAKMRACGWDVIDIEDGNWDVETIVRAMDKA 269 >gi|77919266|ref|YP_357081.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter carbinolicus DSM 2380] gi|118595596|sp|Q3A3Z6|DXS_PELCD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|77545349|gb|ABA88911.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter carbinolicus DSM 2380] Length = 634 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G+A A + + V GDG+ G +E+ N A Sbjct: 106 SPYDAFDVGHS--STSISAALGMAAARDCKNGKEKFVAVIGDGSLTGGMAFEALNQAGDQ 163 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTN 234 N N+I ++ +N+ ++ +V S+ N Sbjct: 164 NKNLIVILNDNEMSISQNVGALSSLIN 190 >gi|290474111|ref|YP_003466988.1| 2-oxoglutarate decarboxylase [Xenorhabdus bovienii SS-2004] gi|289173421|emb|CBJ80198.1| 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex, thiamin-binding [Xenorhabdus bovienii SS-2004] Length = 935 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGAA-NQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V GD A QG V E+ N++ V + ++ NNQ TS + + T + Sbjct: 352 LPVTIHGDAAVIGQGIVQETLNMSQARGYEVGGTVRIVINNQIGFTTSNPKDARSTQYCT 411 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V P V+ D AV A+ + K ++I+++ YR GH+ +D Sbjct: 412 DIVKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEAD 466 >gi|207092987|ref|ZP_03240774.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori HPKX_438_AG0C1] Length = 480 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 7/121 (5%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH VS+G G+A A +++ + + GDG+ + G YE+ N Sbjct: 9 SAYDYFIAGHS--STSVSIGVGVAKAFCLKQALGMPIALLGDGSISAGIFYEALNELGDR 66 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 +I ++ +N+ ++ T + S + +G P Q ++ + +T+ ++V Y Sbjct: 67 KYPMIMILNDNEMSISTPIGALSKALSQLMKG-----PFYQSFRSKVKKILSTLPESVNY 121 Query: 268 C 268 Sbjct: 122 L 122 >gi|147855372|emb|CAN83878.1| hypothetical protein VITISV_003880 [Vitis vinifera] Length = 713 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 44/192 (22%), Positives = 75/192 (39%), Gaps = 26/192 (13%) Query: 18 NP-SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 NP ++S+++ +TS +D ++ P + LS L +L E+ +Y + Sbjct: 54 NPGAMSSEKPSTSILDTINHP----------KHMKNLSIEELEMLADELREEL--VYVVS 101 Query: 77 MVGGFCHLCIGQEAVIVGMKMSLTEGDQMI---TAYREHGH-ILACGVDASKIMAELTGR 132 GG +G + V + D I ++ + H IL + + +G Sbjct: 102 KTGGHLSASLGVAELTVALHHVFNTPDDKIIWDVGHQAYPHKILTARRSRMHTIRQTSGL 161 Query: 133 QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAA 192 G + + S + F GH +S G G+A A R + + GDGA Sbjct: 162 AGFPKRDE-------SVHDAFGAGHS--STSISAGLGMAVARDLLRKNNHVIAVIGDGAM 212 Query: 193 NQGQVYESFNIA 204 GQ YE+ N A Sbjct: 213 TAGQAYEAMNNA 224 >gi|115377450|ref|ZP_01464653.1| 2-oxoglutarate dehydrogenase E1 component [Stigmatella aurantiaca DW4/3-1] gi|115365548|gb|EAU64580.1| 2-oxoglutarate dehydrogenase E1 component [Stigmatella aurantiaca DW4/3-1] Length = 692 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 10/128 (7%) Query: 178 RSDKICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQT 233 R+ + ++ GD A QG + E+ N++ L ++++ NNQ T + + Sbjct: 92 RTRVMPLLIHGDAAFMGQGVISETLNLSRLKGYETGGTLHIVINNQVGFTTDPHDSRSSI 151 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH------ 287 + ++P V+G D A Y + K +I+++ YR GH Sbjct: 152 YATAIAQMLDVPVFHVNGDDPEACVHVARLVAEYRQTFKSDAVIDLICYRRYGHNEGDDP 211 Query: 288 SMSDPANY 295 S + PA Y Sbjct: 212 SFTQPAMY 219 >gi|319941605|ref|ZP_08015929.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sutterella wadsworthensis 3_1_45B] gi|319804835|gb|EFW01689.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sutterella wadsworthensis 3_1_45B] Length = 635 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 7/115 (6%) Query: 129 LTGRQGGISKGKG-GSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G++K + G + F + + F H +LG +A A+ D+ Sbjct: 96 LTGRRAGMAKLRQLGGISGFPKRSESEYDAFGTAHSSTSISAALGMAVA-AHLAGERDRW 154 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + GDGA G E+ N A +W V ++ N S + N +K Sbjct: 155 AIAVIGDGALTGGMAIEALNDAGVWKKGVKLLVIVNDNDCSISPPAGALSKNLAK 209 >gi|311105030|ref|YP_003977883.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter xylosoxidans A8] gi|310759719|gb|ADP15168.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter xylosoxidans A8] Length = 620 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 9/105 (8%) Query: 129 LTGRQGGISKGKG-GSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G++K + G + F + + F H +LG +A N + I Sbjct: 83 LTGRRAGMAKLRQQGGISGFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGVQRQHI 142 Query: 183 CVVCFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAMGTSV 226 ++ GDGA + G +E+ N A + N+N++ ++ +N ++ V Sbjct: 143 AII--GDGAMSAGMAFEAMNNAGVTPNINLLVILNDNDMSISPPV 185 >gi|239996637|ref|ZP_04717161.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii ATCC 27126] Length = 513 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 48/225 (21%), Positives = 86/225 (38%), Gaps = 58/225 (25%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR +S + K G +H F S + F GH +S G G+A A + ++ Sbjct: 88 LTGRAERMSTIRQKNG-LHPFPWPPESDYDTFAVGHS--STSISAGLGMAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 V GDGA G +E+ N A +++ V+ +N+ ++ +V ++ G Sbjct: 145 KVVAVIGDGAMTAGMAFEALNHAGDIKKDMVVVLNDNEMSISENVGALNSHLARLLTGNF 204 Query: 242 FN-------------------------------IPGM-----------QVDGMDIRAVKA 259 FN +PG +DG D+ V Sbjct: 205 FNSIRDGGKKLLSNVPPIKEFASRAEEHIKGMVVPGTIFEELGFNYIGPIDGHDVNGVVD 264 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEIN 302 T+ R GP ++ ++T + +G++++ DP + + N Sbjct: 265 TLRN----MRKFDGPQLLHVVTKKGKGYAVAEEDPIKFHAVPKFN 305 >gi|94500550|ref|ZP_01307081.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanobacter sp. RED65] gi|94427340|gb|EAT12319.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanobacter sp. RED65] Length = 625 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 19/71 (26%), Positives = 35/71 (49%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + + SDK GDGA G +E+ N A + +++ ++ Sbjct: 123 GVGHSSTSISAALGMAIAARQQGSDKKVAAVIGDGAMTAGMAFEALNHAGHTDTDMLVIL 182 Query: 216 ENNQYAMGTSV 226 +N ++ +V Sbjct: 183 NDNDMSISENV 193 >gi|40849969|gb|AAR95699.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Ginkgo biloba] Length = 738 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 3/85 (3%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A V GDGA GQ YE+ N + Sbjct: 197 SEHDAFGAGHS--STSISAGLGMAVGRDLLGKRNHVVAVIGDGAMTAGQAYEAMNNSGYL 254 Query: 208 NLNVIYVI-ENNQYAMGTSVSRASA 231 + N+I ++ +N Q ++ T+ +A Sbjct: 255 DSNMIIILNDNKQVSLPTATLDGAA 279 >gi|90961191|ref|YP_535107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus salivarius UCC118] gi|90820385|gb|ABD99024.1| 1-deoxy-D-xylulose 5-phosphate synthase [Lactobacillus salivarius UCC118] Length = 586 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 66/167 (39%), Gaps = 29/167 (17%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH ++L TG+A A + + V GDG+ + G E N AA Sbjct: 111 SEHDYFKVGH--TSTSIALATGMAKARDMKNENGNIVAVIGDGSMSGGLALEGLNNAAKL 168 Query: 208 NLNVIYVIENNQ----------YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N+I + +NQ Y M + + Q+ S N+ + G+D R V Sbjct: 169 KSNLIIIFNDNQMSIDDVNGGMYKMFAELRETNGQS-------SNNL--FKAMGLDYRYV 219 Query: 258 K-----ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 TM + + PI++ + T + G+ PA R RE Sbjct: 220 DNGNDLETMISVLEEVKDIDHPIVVHINTLKGEGYQ---PAIERKRE 263 >gi|86138817|ref|ZP_01057389.1| transketolase [Roseobacter sp. MED193] gi|85824464|gb|EAQ44667.1| transketolase [Roseobacter sp. MED193] Length = 673 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 17/144 (11%) Query: 158 GIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLN 210 G +G +S G A A + +R+ D V GDG +G E+ +A +L Sbjct: 124 GPLGQGISNAVGFAMAEEMQRAQYGRKIVDHHTYVIAGDGCLMEGISQEAIGLAGRHSLG 183 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV---DGMDIRAVKATMDKAVAY 267 + V+ +N S +TN +R F G QV DG D A+ D+A+ Sbjct: 184 KLIVLWDNNNITIDGTVELSDRTNQVQR---FRASGWQVIEIDGHDPVAI----DEALTA 236 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSD 291 + K P +I T+ GH+ D Sbjct: 237 AKKSKKPSMIACKTHIALGHAAQD 260 >gi|300022017|ref|YP_003754628.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans ATCC 51888] gi|299523838|gb|ADJ22307.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans ATCC 51888] Length = 648 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 29/59 (49%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 +S G G+A A D V GDGA + G YE+ N A N +I ++ +N ++ Sbjct: 130 ISAGLGMAVARDMSGGDTNVVCVIGDGAMSAGMAYEALNNAGARNERLIVILNDNDMSI 188 >gi|218282996|ref|ZP_03489098.1| hypothetical protein EUBIFOR_01684 [Eubacterium biforme DSM 3989] gi|218216190|gb|EEC89728.1| hypothetical protein EUBIFOR_01684 [Eubacterium biforme DSM 3989] Length = 272 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 23/108 (21%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A NK ++ GDG +G+V+E+ A+ + L N+ +++ Sbjct: 115 GSLGQGISCAVGMAITNKVDGNNHRIYALLGDGECEEGEVWEAAMAASHYKLDNLCAILD 174 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N + ++ + F + +F + V+G D ++ ++A Sbjct: 175 YNHLQIDGNIEDVISPEPFMSKFEAFGWNVLDVNGHDFDELRNAFEQA 222 >gi|153947189|ref|YP_001402206.1| transketolase. N-terminal subunit [Yersinia pseudotuberculosis IP 31758] gi|152958684|gb|ABS46145.1| putative transketolase. N-terminal subunit [Yersinia pseudotuberculosis IP 31758] Length = 276 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 1/106 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K S + V GDG +G +E+ +AA + L N++ + + Sbjct: 121 GALGHGLPVAVGIALAAKRANSKRRVFVLTGDGELAEGSNWEAALVAAHYQLDNLVIIND 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 N+ + + + + +F + + G D+++V T++ Sbjct: 181 KNKLQLAGTTKSIMNTDPLADKWRAFGLQVTECRGNDMQSVVETLE 226 >gi|293376581|ref|ZP_06622809.1| 1-deoxy-D-xylulose-5-phosphate synthase [Turicibacter sanguinis PC909] gi|292644807|gb|EFF62889.1| 1-deoxy-D-xylulose-5-phosphate synthase [Turicibacter sanguinis PC909] Length = 622 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 21/157 (13%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S+ + + GH +S G+A+A D + GDG+ G YE+ N Sbjct: 106 SSHDCWETGHA--STSISAAVGMAYARDLNEDDYHVIAIIGDGSLTGGMAYEALNHIGHT 163 Query: 208 NLNVIYVIENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 N +I ++ +N+ A+ +V R + +KR V + G QV I K Sbjct: 164 NKRLIVILNDNEMAISPNVGALHNILGTIRTTDSYLNTKRQVKAVLKGNQVLNGVIHRTK 223 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRY----RGHSMSD 291 ++ + + G + L ++Y GH+++D Sbjct: 224 GSVKRLLI------GNTPFDALGFKYFGPVDGHNLND 254 >gi|291536358|emb|CBL09470.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseburia intestinalis M50/1] Length = 569 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 8/104 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ + K G M F + + F GH +S G G A A + D Sbjct: 28 LTGRRENFDTLRKYGGMSGFPKRKESDCDCFDTGHS--STSISAGLGYAHAREIAGEDYK 85 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N AA N I V+ +N ++ +V Sbjct: 86 VVSVIGDGALTGGMAFEALNNAAQLKSNFIIVLNDNNMSISENV 129 >gi|227891872|ref|ZP_04009677.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus salivarius ATCC 11741] gi|227866335|gb|EEJ73756.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus salivarius ATCC 11741] Length = 586 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 15/160 (9%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH ++L TG+A A + + V GDG+ + G E N AA Sbjct: 111 SEHDYFKVGH--TSTSIALATGMAKARDMKNENGNIVAVIGDGSMSGGLALEGLNNAAKL 168 Query: 208 NLNVIYVIENNQYAMGT---SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK-----A 259 N+I + +NQ ++ + + A+ + S N+ + G+D R V Sbjct: 169 KSNLIIIFNDNQMSIDDVNGGMYKMFAELRETNGQSSNNL--FKAMGLDYRYVDNGNDLE 226 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 TM + + PI++ + T + G+ PA R RE Sbjct: 227 TMISVLEEVKDIDHPIVVHINTLKGEGYQ---PAIERKRE 263 >gi|227873688|ref|ZP_03991922.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oribacterium sinus F0268] gi|227840477|gb|EEJ50873.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oribacterium sinus F0268] Length = 623 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +S GIA A + V GDGA G YE+ N A+ N I Sbjct: 110 FNTGHS--STSISAALGIAQARDILGGKETVVAVIGDGALTGGMAYEALNNASKMKKNFI 167 Query: 213 YVIENNQYAMGTSVSRASAQTN 234 ++ +N+ ++ +V S N Sbjct: 168 IILNDNEMSIAKNVGGISTYLN 189 >gi|113476604|ref|YP_722665.1| 1-deoxy-D-xylulose-5-phosphate synthase [Trichodesmium erythraeum IMS101] gi|123352111|sp|Q10ZY2|DXS_TRIEI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|110167652|gb|ABG52192.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Trichodesmium erythraeum IMS101] Length = 635 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 48/208 (23%), Positives = 80/208 (38%), Gaps = 38/208 (18%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E++ + LS ++L + R+ EK L + GG +G + +G+ +L Sbjct: 5 EITHPKQLHNLSIHQLEEIARQIREK--HLETVATSGGHLGPGLGVVELTLGLYQTLN-- 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFST---KNGFYG---- 155 +D K++ ++ G Q K G H F T K+G G Sbjct: 61 -----------------LDRDKVIWDV-GHQAYPHKIITGRYHNFHTLRQKDGIAGYLKR 102 Query: 156 --------GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-L 206 G G +S G G+A A + + V GDGA G E+ N A L Sbjct: 103 CESKFDHFGAGHASTSISAGLGMALARDMKGDNFKVVSIIGDGALTGGMALEAINHAGHL 162 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTN 234 N++ V+ +N+ ++ +V S N Sbjct: 163 PKTNILVVLNDNEMSISPNVGAISRYLN 190 >gi|153799534|gb|ABS50518.1| 1-deoxy-D-xylulose 5-phosphate synthase type I [Picea abies] Length = 717 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 31/64 (48%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G G+A + + + GDGA GQ +E+ N A + N+I ++ Sbjct: 182 GAGHSSTSISAGLGMAVGRDLKGRNNHVISVIGDGAMTAGQAFEAMNNAGYLDSNMIVIL 241 Query: 216 ENNQ 219 +N+ Sbjct: 242 NDNK 245 >gi|291538772|emb|CBL11883.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseburia intestinalis XB6B4] Length = 569 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 8/104 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ + K G M F + + F GH +S G G A A + D Sbjct: 28 LTGRRENFDTLRKYGGMSGFPKRKESDCDCFDTGHS--STSISAGLGYAHAREIAGEDYK 85 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N AA N I V+ +N ++ +V Sbjct: 86 VVSVIGDGALTGGMAFEALNNAAQLKSNFIIVLNDNNMSISENV 129 >gi|170693122|ref|ZP_02884283.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia graminis C4D1M] gi|170142120|gb|EDT10287.1| 2-oxoglutarate dehydrogenase, E1 subunit [Burkholderia graminis C4D1M] Length = 864 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 11/133 (8%) Query: 167 GTGIAFANKYRRSDKICVVCFGDGA-ANQGQVYESFNIA-----ALWNLNVIYVIENNQY 220 G A+ +++R + +V GD A A QG V E+ N+ AL I+VI NNQ Sbjct: 273 GMARAYQDEHRGFGCLPLVMHGDAAFAGQGIVMETLNMTRKDGYALGG--TIHVIVNNQI 330 Query: 221 AMGTSVSR--ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 T+ +R A A + + + P ++V+ V A+ Y H+ +II+ Sbjct: 331 GF-TTPNRMDAEAYSYCTDIARMIDAPVIRVNADRPDEVMRAAKLALQYRIEHEADVIID 389 Query: 279 MLTYRYRGHSMSD 291 ++ YR GHS D Sbjct: 390 LIGYRRLGHSEHD 402 >gi|28869597|ref|NP_792216.1| transketolase, N-terminal subunit [Pseudomonas syringae pv. tomato str. DC3000] gi|28852839|gb|AAO55911.1| transketolase, N-terminal subunit [Pseudomonas syringae pv. tomato str. DC3000] Length = 278 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI-E 216 G +G + + G+A A K S+K V GDG +G +E+ AA + L+ ++VI + Sbjct: 121 GALGHGLPVAVGLALAAKMSGSNKRIYVLTGDGELAEGSNWEAAMAAAKYGLDNLFVIVD 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N+ + + + +F + DG D+ + A+ + + KG P Sbjct: 181 KNKLQLAGLTAEIMPLDPLDAKWAAFGFTVSECDGNDV----GQLVTALEHMQLRKGAPQ 236 Query: 276 IIEMLTYRYRGHSM 289 ++ T + RG S Sbjct: 237 VLIAHTIKGRGVSF 250 >gi|302335584|ref|YP_003800791.1| 1-deoxy-D-xylulose-5-phosphate synthase [Olsenella uli DSM 7084] gi|301319424|gb|ADK67911.1| 1-deoxy-D-xylulose-5-phosphate synthase [Olsenella uli DSM 7084] Length = 584 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 18/146 (12%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G VSL G+A A + V GDG+ + G+ E N AA N I V+ + Sbjct: 113 GHTSTSVSLALGLAKARDVLGGSENVVAIIGDGSLSGGEALEGLNAAAELGSNFIVVVND 172 Query: 218 NQYAMGTS------------VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 NQ ++ + +R A+ N R + F+ + DG D A+ +++ Sbjct: 173 NQMSIAENHGGLYRGLAELRRTRGEARDNLF-RAMGFDYRYV-ADGNDCEALIPVLEE-- 228 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSD 291 + P+++ + T++ +G++ ++ Sbjct: 229 --VHGIRHPVVVHVNTFKGKGYAPAE 252 >gi|294626171|ref|ZP_06704777.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599523|gb|EFF43654.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 651 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ I K K G + Y G+ +S G+A A + D+ V Sbjct: 100 LTGRRDQIHTVKQKDGVAPFPKREESIYDTFGVGHSSTSISAALGMAIAAQRNGDDRKVV 159 Query: 185 VCFGDGAANQGQVYESFNIAALWN--LNVIYVIENNQYAMGTSV 226 GDGA G VYE+ N A + N++ ++ +N+ ++ +V Sbjct: 160 AVIGDGAMTAGMVYEALNHAGGMDPEPNLLVILNDNRMSISEAV 203 >gi|224104228|ref|XP_002333970.1| predicted protein [Populus trichocarpa] gi|222839426|gb|EEE77763.1| predicted protein [Populus trichocarpa] Length = 396 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GHG +S G G+A A + + V G+G GQVYE+ A Sbjct: 180 SEYDPFGAGHGC--NSISAGLGMAVARDIKGKRERIVTVIGNGTTMAGQVYEAMGNAGYL 237 Query: 208 NLNVIYVIENNQYAMGTSVSRAS 230 + N+I ++ ++++++ + S Sbjct: 238 DSNMIVILNDSRHSLHPKIEEGS 260 >gi|145641600|ref|ZP_01797177.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae R3021] gi|145273647|gb|EDK13516.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 22.4-21] Length = 361 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 18/69 (26%), Positives = 35/69 (50%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G +S G GIA A + + + V GDGA G +E+ N A + +++ ++ + Sbjct: 117 GHSSTSISAGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILND 176 Query: 218 NQYAMGTSV 226 N+ ++ +V Sbjct: 177 NEMSISENV 185 >gi|325839392|ref|ZP_08166831.1| 1-deoxy-D-xylulose-5-phosphate synthase [Turicibacter sp. HGF1] gi|325490512|gb|EGC92828.1| 1-deoxy-D-xylulose-5-phosphate synthase [Turicibacter sp. HGF1] Length = 622 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 21/157 (13%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S+ + + GH +S G+A+A D + GDG+ G YE+ N Sbjct: 106 SSHDCWETGHA--STSISAAVGMAYARDLNEDDYHVIAIIGDGSLTGGMAYEALNHIGHT 163 Query: 208 NLNVIYVIENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 N +I ++ +N+ A+ +V R + +KR V + G QV I K Sbjct: 164 NKRLIVILNDNEMAISPNVGALHNILGTIRTTDSYLNTKRQVKAVLKGNQVLNGVIHRTK 223 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRY----RGHSMSD 291 ++ + + G + L ++Y GH+++D Sbjct: 224 GSVKRLLI------GNTPFDALGFKYFGPVDGHNLND 254 >gi|319941738|ref|ZP_08016060.1| transketolase [Sutterella wadsworthensis 3_1_45B] gi|319804671|gb|EFW01538.1| transketolase [Sutterella wadsworthensis 3_1_45B] Length = 669 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 23/136 (16%) Query: 158 GIVGAQVSLGTGIAFANK----------YRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 G +G ++ G G+A A K + D V GDG +G +E ++A +W Sbjct: 116 GPLGQGIANGVGMALAEKLLAAEFNRDGFPVVDNRTYVFLGDGCLMEGISHEVCSLAGVW 175 Query: 208 NLN-VIYVIENNQYAMGTSVS---RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 LN +I + ++N ++ V R + F G +N+ G VDG DI AV D+ Sbjct: 176 KLNKLIALYDDNGISIDGDVRGWFRDDTRGRFEAYG--WNVIG-PVDGHDINAV----DQ 228 Query: 264 AVAYCR--AHKGPIII 277 A+A + A K +II Sbjct: 229 AIAQAKESAEKPTLII 244 >gi|261334044|emb|CBH17038.1| 2-oxoglutarate dehydrogenase subunit, putative [Trypanosoma brucei gambiense DAL972] Length = 1008 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 16/181 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLN------VIYVIENNQYAMGTS---VSRASA 231 + ++ GD A + G +E+ LW+L+ +++I NNQ T RA Sbjct: 377 LPIIAHGDAAISGLGMGHETM---GLWDLDNYRVGGTVHIITNNQVGFTTDSVDARRAKY 433 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 ++ SK + P + V+ D+ A A + + III+++ YR GH+ +D Sbjct: 434 CSDISKIHTT---PVLHVNSNDVEACVRAARIAARFRQTFHRDIIIDLIGYRRNGHNEAD 490 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 ++ + +RS ++ L+ ++ D+K + + + E AQS Sbjct: 491 FPDFTQPQMYQIVRSLRPLVDLYSDTLVEEGVLTKEDVKAKKKEYESRLREAYETAQSCP 550 Query: 352 E 352 E Sbjct: 551 E 551 >gi|154148341|ref|YP_001406848.1| 1-deoxy-D-xylulose-5-phosphate synthase [Campylobacter hominis ATCC BAA-381] gi|166198607|sp|A7I2V7|DXS_CAMHC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|153804350|gb|ABS51357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Campylobacter hominis ATCC BAA-381] Length = 607 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 13/156 (8%) Query: 79 GGFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACG-VDASKIMAELTGRQG 134 GG +G +IV M + D I +++ + H L G D + +L G Sbjct: 30 GGHLSSNMGAVELIVAMHYVFDPDSDPFIFDVSHQSYAHKLLTGRWDEFSSLRQL----G 85 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 GIS G + S + F GH +SL G A A K + ++I V GDGA + Sbjct: 86 GIS---GYTKPKESKFDYFVAGHS--STSISLAVGAAKAIKLKGENRIPVALIGDGAMSA 140 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 G YE+ N I ++ +N+ ++ + S Sbjct: 141 GMAYEAMNELGERKYPCIIILNDNEMSISRPIGAIS 176 >gi|327182883|gb|AEA31330.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus amylovorus GRL 1118] Length = 580 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 14/144 (9%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G ++L TG+A A + + GDG+ G YE N A + N++ Sbjct: 115 YYAVGHTSTSIALATGMAKARDLMGRHENIMALIGDGSMTGGLAYEGLNNAVIEKHNIVV 174 Query: 214 VIENNQYAMGTSVS------RASAQTNFSKRGVSFNIPGMQ----VDGMDIRAVKATMDK 263 V+ +NQ ++ +V + +N + F G DG D++ +M Sbjct: 175 VVNDNQMSIDENVGGLVTALKKLRDSNGETKENPFTAMGFDYRYVADGNDVK----SMID 230 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGH 287 A + PI++ + T + +G+ Sbjct: 231 AFKAVKDVDHPILLHINTLKGKGY 254 >gi|261340687|ref|ZP_05968545.1| transketolase, N- subunit [Enterobacter cancerogenus ATCC 35316] gi|288317102|gb|EFC56040.1| transketolase, N- subunit [Enterobacter cancerogenus ATCC 35316] Length = 276 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 6/66 (9%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNLN--VIY 213 G +G +S+ G+A ++K R + C+V GDG N+GQ +E+F A LN I+ Sbjct: 115 GSLGQGISIAGGMALSHKLAGRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTIF 172 Query: 214 VIENNQ 219 V N Q Sbjct: 173 VDWNKQ 178 >gi|254456404|ref|ZP_05069833.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter sp. HTCC7211] gi|207083406|gb|EDZ60832.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter sp. HTCC7211] Length = 638 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 67/184 (36%), Gaps = 47/184 (25%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S GIA ANK + GDGA + G YE+ N A +I ++ +N ++ Sbjct: 124 ISSALGIAEANKLANKTSNVIAVIGDGAISAGMAYEAMNNAGASKTKMIVILNDNDMSIA 183 Query: 224 TSVSRASA---------------------QTNFSKR------------------GVSFNI 244 V + FSKR G F+ Sbjct: 184 KPVGAMRTYLAKLFTGKIYFSFRETLKLITSAFSKRFSAKAGKAEDFLRSAVTGGTLFSS 243 Query: 245 PGM----QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA--NYRTR 298 G +DG D+ + + A H+GPI+I + T + +G+S ++ A NY Sbjct: 244 LGFYYAGPIDGHDLNDLIPILKN--ARDSKHEGPIMIHVKTQKGKGYSYAEKATDNYHGV 301 Query: 299 EEIN 302 + N Sbjct: 302 SKFN 305 >gi|330959940|gb|EGH60200.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 631 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 68/356 (19%), Positives = 132/356 (37%), Gaps = 85/356 (23%) Query: 21 VSAKRAATSSVDCVDIPFLEGFE-VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 + +R T +D D P EG + E E RL LL Y +G G Sbjct: 8 IPRERPVTPLLDRADTP--EGLRRLGEAELETLADELRLELL-----------YSVGQTG 54 Query: 80 GFCHLCIGQEAVIVGMKMSL-TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGI 136 G +G + + + T D+++ ++ + H + LTGR+ + Sbjct: 55 GHFGAGLGVIELTIALHYVFDTPDDRLVWDVGHQAYPHKI------------LTGRRARM 102 Query: 137 S--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAA 192 S + K G Y G+ +S G+A A++ + S++ + GDGA Sbjct: 103 STLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIASRLQGSERKSIAVIGDGAL 162 Query: 193 NQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV-------------------------- 226 G +E+ N A +++ ++ +N ++ +V Sbjct: 163 TAGMAFEALNHAPEVAADMLVILNDNDMSISRNVGGLSNYLAKILSSRTYTSMREGSKKV 222 Query: 227 -SRASAQTNFSKRGVSFN----IPGM-----------QVDGMDIRAVKATMDKAVAYCRA 270 SR ++R + +PG +DG D+ + AT+ R Sbjct: 223 LSRLPGAWEIARRTEEYAKGMLVPGTLFEELGWNYIGPIDGHDLPTLIATLRN----MRD 278 Query: 271 HKGPIIIEMLTYRYRGHSMS--DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 KGP + ++T + +G + + DP Y I ++ + P+ ++K++ K++ Sbjct: 279 LKGPQFLHVVTKKGKGFAPAEVDPIGYHA---ITKLEPANAPV-SIQKKVSAPKYS 330 >gi|315037587|ref|YP_004031155.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus amylovorus GRL 1112] gi|312275720|gb|ADQ58360.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus amylovorus GRL 1112] Length = 580 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 14/144 (9%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G ++L TG+A A + + GDG+ G YE N A + N++ Sbjct: 115 YYAVGHTSTSIALATGMAKARDLMGRHENIMALIGDGSMTGGLAYEGLNNAVIEKHNIVV 174 Query: 214 VIENNQYAMGTSVS------RASAQTNFSKRGVSFNIPGMQ----VDGMDIRAVKATMDK 263 V+ +NQ ++ +V + +N + F G DG D++ +M Sbjct: 175 VVNDNQMSIDENVGGLVTALKKLRDSNGETKENPFTAMGFDYRYVADGNDVK----SMID 230 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGH 287 A + PI++ + T + +G+ Sbjct: 231 AFKAVKDVDHPILLHINTLKGKGY 254 >gi|164604984|dbj|BAF98288.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis] Length = 720 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ M+ NG G G G +S G G+A + Sbjct: 152 ILTGRREKMYTIRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGKKNNV 211 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 212 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 247 >gi|118618986|ref|YP_907318.1| 2-oxoglutarate ferredoxin oxidoreductase subunit beta [Mycobacterium ulcerans Agy99] gi|118571096|gb|ABL05847.1| pyruvate:ferredoxin oxidoreductase PorB, beta subunit [Mycobacterium ulcerans Agy99] Length = 363 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 17/140 (12%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ-------GQVYESFNIAAL 206 YG H I G ++ TG+A A R D V GDG A V + NI L Sbjct: 91 YGFHSIHGRAPAIATGLALA----REDLSVWVVTGDGDALSIGGNHLIHAVRRNVNITIL 146 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD------GMDIRAVKAT 260 N IY + QY+ + V + + T FN + + G + + +A Sbjct: 147 LFNNRIYGLTKGQYSPTSEVGKVTKSTPMGSLDTPFNPVSLALGAEATFVGRALDSDRAG 206 Query: 261 MDKAVAYCRAHKGPIIIEML 280 + + + H+G ++E+L Sbjct: 207 LSEVLRAATEHRGAALVEIL 226 >gi|34190015|gb|AAH25382.2| Transketolase-like 1 [Homo sapiens] gi|117645886|emb|CAL38410.1| hypothetical protein [synthetic construct] gi|117646682|emb|CAL37456.1| hypothetical protein [synthetic construct] gi|261858008|dbj|BAI45526.1| transketolase-like protein 1 [synthetic construct] Length = 596 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 6/144 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ Sbjct: 94 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVATF 153 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 154 DVNRLGHSGALPAEHCINIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 210 Query: 276 IIEMLTYRYRG-HSMSDPANYRTR 298 + T++ RG S+ D ++ + Sbjct: 211 AVVAKTFKGRGTPSIEDAESWHAK 234 >gi|213969290|ref|ZP_03397428.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv. tomato T1] gi|301381794|ref|ZP_07230212.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. tomato Max13] gi|302061006|ref|ZP_07252547.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. tomato K40] gi|302130542|ref|ZP_07256532.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925968|gb|EEB59525.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv. tomato T1] Length = 631 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 4/102 (3%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ +S + K G Y G+ +S G+A A++ + S++ + Sbjct: 95 LTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIASRLQGSERKSI 154 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GDGA G +E+ N A N++ ++ +N ++ +V Sbjct: 155 AVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSISRNV 196 >gi|193792541|gb|ACF21004.1| 1-deoxy-D-xylulose 5-phosphate synthase [Salvia miltiorrhiza] Length = 714 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 14/100 (14%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GG+S G + S + F GH LG + K R+ Sbjct: 148 LTGRRDRMPSLRQTGGLS---GFTKRSESDYDCFGAGHSSTTISAGLGMAVGRDLKGRKD 204 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + + V+ GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 205 NVVAVI--GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 242 >gi|123979818|gb|ABM81738.1| transketolase-like 1 [synthetic construct] gi|123994583|gb|ABM84893.1| transketolase-like 1 [synthetic construct] Length = 540 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 6/144 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ Sbjct: 38 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVATF 97 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 + N+ ++ + +R +F VDG D+ A+ +A HK P Sbjct: 98 DVNRLGHSGALPAEHCINIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQV--KHK-PT 154 Query: 276 IIEMLTYRYRG-HSMSDPANYRTR 298 + T++ RG S+ D ++ + Sbjct: 155 AVVAKTFKGRGTPSIEDAESWHAK 178 >gi|50086242|ref|YP_047752.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter sp. ADP1] gi|81613015|sp|Q6F7N5|DXS_ACIAD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|49532218|emb|CAG69930.1| 1-deoxyxylulose-5-phosphate synthase [Acinetobacter sp. ADP1] Length = 640 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 19/71 (26%), Positives = 36/71 (50%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G G++ A +Y+++ V GDGA G +E+ N A + +++ V+ Sbjct: 127 GVGHSSTAISAGLGMSLARRYQQNPCEVVCIVGDGAMTAGMAFEAMNDAVAHDADLMVVL 186 Query: 216 ENNQYAMGTSV 226 +N ++ S Sbjct: 187 NDNDMSISCST 197 >gi|283834263|ref|ZP_06354004.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citrobacter youngae ATCC 29220] gi|291069785|gb|EFE07894.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citrobacter youngae ATCC 29220] Length = 620 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKER 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIKPDMLVILNDNEMSISENV 189 >gi|237715136|ref|ZP_04545617.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides sp. D1] gi|262408913|ref|ZP_06085458.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides sp. 2_1_22] gi|294648227|ref|ZP_06725764.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides ovatus SD CC 2a] gi|294810026|ref|ZP_06768700.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides xylanisolvens SD CC 1b] gi|229444969|gb|EEO50760.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides sp. D1] gi|262353124|gb|EEZ02219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides sp. 2_1_22] gi|292636415|gb|EFF54896.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides ovatus SD CC 2a] gi|294442872|gb|EFG11665.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides xylanisolvens SD CC 1b] Length = 585 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 24/170 (14%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH VSL +G+A ++ + GDG+ + G+ +E + A Sbjct: 105 SKHDFFVIGH--TSTSVSLASGLAKGRDLIGGNENIIAVIGDGSLSGGEAFEGLDYMAEL 162 Query: 208 NLNVIYVIENNQYAMGTS------------VSRASAQTNFSKRGVSFNIPGMQV-DGMDI 254 N+I ++ +NQ ++ + S + NF K + + + V DG D+ Sbjct: 163 GTNMIIIVNDNQMSIAENHGGLYKNLKELRDSNGQCECNFFK---AMGLDYIYVNDGNDV 219 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG--HSMSDPANYRTREEIN 302 +A + +A + + + PI++ + T + +G H+ D Y R N Sbjct: 220 QA----LIEAFSKVKDIQHPIVVHINTLKGKGYAHAEQDKETYHWRTPFN 265 >gi|227113447|ref|ZP_03827103.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 621 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 58/218 (26%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 +TGR+ IS + KGG +H F ++ GH LG +A + + Sbjct: 88 ITGRRDRISTIRQKGG-LHPFPWRDESDYDVLSVGHSSTSISAGLGMAVAAEREGKGRRT 146 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS---AQTNFSKR 238 +CV+ GDGA G +E+ N A +++ V+ +N+ ++ +V + AQ K Sbjct: 147 VCVI--GDGAITAGMAFEAMNHAGDIKSDLLVVLNDNEMSISENVGALNNHLAQLLSGKL 204 Query: 239 GVSFN----------------------------IPGM-----------QVDGMDIRAVKA 259 S +PG VDG D++A+ Sbjct: 205 YASLREGGKKVLSGLPPIKELVKRTEEHLKGMVVPGTLFEELGFNYIGPVDGHDVQALAH 264 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 T+ R+ KGP ++ ++T + +G++ + DP ++ Sbjct: 265 TLKN----MRSLKGPQLLHIMTKKGKGYAPAEQDPISW 298 >gi|171850410|gb|ACB55417.1| 1-deoxy-D-xylulose 5-phosphate synthase [Picrorhiza kurrooa] Length = 687 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +LG G+A D + GDGA GQ YE+ N A Sbjct: 147 SAHDAFGVGHSSTSISAALG-GMAVGRDLLGKDNHVISVIGDGAMTAGQAYEAMNNAGFL 205 Query: 208 NLNVIYVI--ENNQYAMGTSV 226 + N+I V+ + Q ++ T+ Sbjct: 206 DSNLIIVLNEQTKQVSLPTAT 226 >gi|170108240|ref|XP_001885329.1| transketolase [Laccaria bicolor S238N-H82] gi|164639805|gb|EDR04074.1| transketolase [Laccaria bicolor S238N-H82] Length = 633 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 10/118 (8%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFG-DGAANQGQVYESFNIAALWNLNVIYVIE 216 G +G SL G+A AN+ + V C G DG+ +G E+ IA LNV +++ Sbjct: 140 GRLGHMWSLVNGVALANRGK-----TVFCLGSDGSQQEGNDAEAARIAVAQKLNVKIIVD 194 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 +N + S+ + +K + V G DI ++ + AV H GP Sbjct: 195 DNDVTISGHPSQYLPGFSVAKTLTGHGLKVFPVQGEDIDSLWGAISGAV----THDGP 248 >gi|15004809|ref|NP_149269.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium acetobutylicum ATCC 824] gi|14994421|gb|AAK76851.1|AE001438_104 1-deoxyxylulose-5-phosphate synthase, dehydrogenase [Clostridium acetobutylicum ATCC 824] gi|325511253|gb|ADZ22888.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium acetobutylicum EA 2018] Length = 586 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 30/147 (20%), Positives = 62/147 (42%), Gaps = 20/147 (13%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G +SL G+A A + + GDG+ + G+ YE N AA N+I ++ + Sbjct: 113 GHTSTSISLACGLAKARDVKDETDNVIAIIGDGSLSGGEAYEGLNNAAETGTNMIIIVND 172 Query: 218 NQYAMGTS------------VSRASAQTNFSKR-GVSFNIPGMQVDGMDIRAVKATMDKA 264 N ++ + + ++ NF K G+ ++ DG D+ + +K Sbjct: 173 NDMSIAENHGGLYKNLKELRDTEGKSECNFFKAMGLDYHYVK---DGHDLEQLIGVFNK- 228 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + K P+++ + T + +G ++ Sbjct: 229 ---VKDTKQPVVVHIHTVKGKGFKFAE 252 >gi|85058854|ref|YP_454556.1| alpha-ketoglutarate decarboxylase [Sodalis glossinidius str. 'morsitans'] gi|84779374|dbj|BAE74151.1| 2-oxoglutarate dehydrogenase E1 component [Sodalis glossinidius str. 'morsitans'] Length = 935 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A + QG V E+ N++ + +V + V+ NNQ TS + T + + Sbjct: 352 LPITLHGDAAISGQGVVQETLNMSKVRGYDVGGTVRVVINNQVGFTTSNPNDARSTQYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV A+ + K ++I+++ YR GH+ +D Sbjct: 412 DIAKMVQAPIFHVNADDPEAVAFVTRVALDFRNTFKRDVMIDLVCYRRHGHNEAD 466 >gi|161378143|ref|NP_742690.2| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida KT2440] gi|38372168|sp|Q88QG7|DXS_PSEPK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS Length = 631 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 48/184 (26%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + + S + + GDGA G +E+ N A N +++ ++ Sbjct: 126 GVGHSSTSISAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVIL 185 Query: 216 ENNQYAMGTSV------------SRASAQTNFSKRGVSFNIPGM---------------- 247 +N ++ +V SR A + V +PG Sbjct: 186 NDNDMSISRNVGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAWEIARRTEEYAKGMLV 245 Query: 248 --------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--D 291 +DG D+ + AT+ R KGP + ++T + +G + + D Sbjct: 246 PGTLFEELGWNYIGPIDGHDLPTMIATLRN----MRDLKGPQFLHVVTKKGKGFAPAEID 301 Query: 292 PANY 295 P Y Sbjct: 302 PIGY 305 >gi|260654793|ref|ZP_05860281.1| putative transketolase [Jonquetella anthropi E3_33 E1] gi|260630508|gb|EEX48702.1| putative transketolase [Jonquetella anthropi E3_33 E1] Length = 640 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 31/61 (50%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G +G +S G G A A R++ V GDG +GQ+ E+ + A NL V +I+ Sbjct: 135 GDLGQGLSAGAGFALAQTARKNKSRVYVLMGDGEQGKGQLAEARRLIAARNLPVTALIDA 194 Query: 218 N 218 N Sbjct: 195 N 195 >gi|256810569|ref|YP_003127938.1| Transketolase domain protein [Methanocaldococcus fervens AG86] gi|256793769|gb|ACV24438.1| Transketolase domain protein [Methanocaldococcus fervens AG86] Length = 275 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S G+A + + + V GDG +G V+E+ AA + L N+I I+ Sbjct: 118 GSLGQGFSASVGMALGCRLDKLNNYVYVLLGDGECQEGIVWEAAMAAAHYKLDNLIAFID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N+ + + + + +F ++DG + + T++KA Sbjct: 178 RNKLQIDGCTEDVMSLGDLKAKFEAFGWDVFEIDGHNFEEIINTVEKA 225 >gi|237730396|ref|ZP_04560877.1| 1-deoxyxylulose-5-phosphate synthase [Citrobacter sp. 30_2] gi|226905935|gb|EEH91853.1| 1-deoxyxylulose-5-phosphate synthase [Citrobacter sp. 30_2] Length = 620 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKER 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|153814705|ref|ZP_01967373.1| hypothetical protein RUMTOR_00920 [Ruminococcus torques ATCC 27756] gi|317500235|ref|ZP_07958465.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium 8_1_57FAA] gi|331087535|ref|ZP_08336467.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium 3_1_46FAA] gi|145847736|gb|EDK24654.1| hypothetical protein RUMTOR_00920 [Ruminococcus torques ATCC 27756] gi|316898361|gb|EFV20402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium 8_1_57FAA] gi|330401753|gb|EGG81331.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium 3_1_46FAA] Length = 619 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 8/108 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G K G M F + + F GH +S G G A + + Sbjct: 80 LTGRKDGFDDLRKYGGMSGFPKRKESECDAFDTGHS--STSISAGLGYVAARELKGEKYN 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 V GDGA G +E+ N A+ N I V+ +N ++ +V S Sbjct: 138 VVSVIGDGAMTGGMAFEALNNASRLKSNFIIVLNDNNMSISENVGGVS 185 >gi|167031588|ref|YP_001666819.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida GB-1] gi|189027782|sp|B0KL79|DXS_PSEPG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|166858076|gb|ABY96483.1| deoxyxylulose-5-phosphate synthase [Pseudomonas putida GB-1] Length = 631 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 48/184 (26%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + + S + + GDGA G +E+ N A N +++ ++ Sbjct: 126 GVGHSSTSISAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVIL 185 Query: 216 ENNQYAMGTSV------------SRASAQTNFSKRGVSFNIPGM---------------- 247 +N ++ +V SR A + V +PG Sbjct: 186 NDNDMSISRNVGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAWEIARRTEEYAKGMLV 245 Query: 248 --------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--D 291 +DG D+ + AT+ R KGP + ++T + +G + + D Sbjct: 246 PGTLFEELGWNYIGPIDGHDLPTMIATLRN----MRDLKGPQFLHVVTKKGKGFAPAEVD 301 Query: 292 PANY 295 P Y Sbjct: 302 PIGY 305 >gi|319776298|ref|YP_004138786.1| 1-deoxy-D-xylulose 5-phosphate synthase [Haemophilus influenzae F3047] gi|317450889|emb|CBY87114.1| 1-deoxy-D-xylulose 5-phosphate synthase [Haemophilus influenzae F3047] Length = 621 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G GIA A + + + V GDGA G +E+ N A + +++ ++ +N+ ++ Sbjct: 123 ISAGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSIS 182 Query: 224 TSV 226 +V Sbjct: 183 ENV 185 >gi|304395707|ref|ZP_07377590.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pantoea sp. aB] gi|304357001|gb|EFM21365.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pantoea sp. aB] Length = 935 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGAA-NQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+ N++ V + ++ NNQ TS + + T + + Sbjct: 352 LPITIHGDAAVIGQGVVQETLNMSQARGYEVGGTVRIVINNQVGFTTSNPKDARSTPYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 G P V+ D AV A+ Y K + I+++ YR GH+ +D Sbjct: 412 DIGKMVLAPIFHVNADDPEAVAFVTRLALDYRNTFKRDVFIDLVCYRRHGHNEAD 466 >gi|213971262|ref|ZP_03399379.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|301383888|ref|ZP_07232306.1| transketolase, N-terminal subunit [Pseudomonas syringae pv. tomato Max13] gi|302063591|ref|ZP_07255132.1| transketolase, N-terminal subunit [Pseudomonas syringae pv. tomato K40] gi|302131000|ref|ZP_07256990.1| transketolase, N-terminal subunit [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924015|gb|EEB57593.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 278 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI-E 216 G +G + + G+A A K S+K V GDG +G +E+ AA + L+ ++VI + Sbjct: 121 GALGHGLPVAVGLALAAKMSGSNKRIYVLTGDGELAEGSNWEAAMAAAKYGLDNLFVIVD 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N+ + + + +F + DG D+ + A+ + + KG P Sbjct: 181 KNKLQLAGLTAEIMPLDPLDAKWAAFGFTVSECDGNDV----GQLVTALEHMQLRKGAPQ 236 Query: 276 IIEMLTYRYRGHSM 289 ++ T + RG S Sbjct: 237 VLIAHTIKGRGVSF 250 >gi|42518499|ref|NP_964429.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus johnsonii NCC 533] gi|41582784|gb|AAS08395.1| 1-deoxy-D-xylulose 5-phosphate synthase [Lactobacillus johnsonii NCC 533] Length = 586 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 22/148 (14%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G ++L TG+A A + GDG+ G +E FN AA N+I Sbjct: 115 YFAVGHTSTSIALATGMARARDMLGEHENITALIGDGSLTGGLAFEGFNNAADEKHNLII 174 Query: 214 VIENNQYAMGTSV-------------SRASAQTNFSKRGVSFNIPGMQVD-GMDIRAVKA 259 V+ +NQ ++ +V + +A F+ G+ + VD G D++A Sbjct: 175 VVNDNQMSIDDNVGGVVTALKKLRESNGQTADNPFTAMGLDYKY----VDQGNDLKA--- 227 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 M A + PI++ + T + +G+ Sbjct: 228 -MIDAFKSIKDIDHPIVLHINTLKGKGY 254 >gi|313496893|gb|ADR58259.1| Dxs [Pseudomonas putida BIRD-1] Length = 631 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 48/184 (26%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + + S + + GDGA G +E+ N A N +++ ++ Sbjct: 126 GVGHSSTSISAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVIL 185 Query: 216 ENNQYAMGTSV------------SRASAQTNFSKRGVSFNIPGM---------------- 247 +N ++ +V SR A + V +PG Sbjct: 186 NDNDMSISRNVGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAWEIARRTEEYAKGMLV 245 Query: 248 --------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--D 291 +DG D+ + AT+ R KGP + ++T + +G + + D Sbjct: 246 PGTLFEELGWNYIGPIDGHDLPTMIATLRN----MRDLKGPQFLHVVTKKGKGFAPAEID 301 Query: 292 PANY 295 P Y Sbjct: 302 PIGY 305 >gi|257873146|ref|ZP_05652799.1| transketolase [Enterococcus casseliflavus EC10] gi|257807310|gb|EEV36132.1| transketolase [Enterococcus casseliflavus EC10] Length = 278 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 5/135 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K GDG +G V+E AA + L N+ +I+ Sbjct: 114 GSLGHGLPVAVGIALAGKLDHRTYQTYTLLGDGELAEGSVWEGAMAAANYQLDNLTAIID 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + A ++ +F VDG D+ A+ A ++K P + Sbjct: 174 RNGLQITGASEDVMAVEPLDEKWRAFGWDVHIVDGNDMAALVAALEKP----HQPNQPKL 229 Query: 277 IEMLTYRYRGHSMSD 291 I T + +G+S ++ Sbjct: 230 IIAKTIKGKGYSAAE 244 >gi|239624189|ref|ZP_04667220.1| transketolase [Clostridiales bacterium 1_7_47_FAA] gi|239520575|gb|EEQ60441.1| transketolase [Clostridiales bacterium 1_7_47FAA] Length = 294 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 3/115 (2%) Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-N 210 G G G +G +S+G G+A + + + V GDG +GQ++E+ A + N Sbjct: 114 GIEAGTGSLGQGLSIGLGMALGQRLDKINSKTYVLVGDGEIAEGQIWEAAMAARAFRADN 173 Query: 211 VIYVIENNQY-AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 ++ +++ N A G + R +K +SF +++DG D++ + +++A Sbjct: 174 LVAIVDRNGLQANGRTKDRFDTGDIIAKF-LSFGWHVIEIDGHDMKQILDALNQA 227 >gi|197119726|ref|YP_002140153.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter bemidjiensis Bem] gi|197089086|gb|ACH40357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter bemidjiensis Bem] Length = 635 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 2/84 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A + + GDG+ G +E+ N A Sbjct: 107 SPHDAFGVGHS--STSISAGLGMAVAQGLKEDAARVISVIGDGSLTGGMAFEALNQAGHL 164 Query: 208 NLNVIYVIENNQYAMGTSVSRASA 231 N+I V+ +N+ ++ +V S+ Sbjct: 165 KKNLIVVLNDNEMSISKNVGALSS 188 >gi|24981908|gb|AAN66154.1|AE016243_6 deoxyxylulose-5-phosphate synthase [Pseudomonas putida KT2440] Length = 655 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 48/184 (26%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + + S + + GDGA G +E+ N A N +++ ++ Sbjct: 150 GVGHSSTSISAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVIL 209 Query: 216 ENNQYAMGTSV------------SRASAQTNFSKRGVSFNIPGM---------------- 247 +N ++ +V SR A + V +PG Sbjct: 210 NDNDMSISRNVGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAWEIARRTEEYAKGMLV 269 Query: 248 --------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--D 291 +DG D+ + AT+ R KGP + ++T + +G + + D Sbjct: 270 PGTLFEELGWNYIGPIDGHDLPTMIATLRN----MRDLKGPQFLHVVTKKGKGFAPAEID 325 Query: 292 PANY 295 P Y Sbjct: 326 PIGY 329 >gi|16128405|ref|NP_414954.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli str. K-12 substr. MG1655] gi|89107290|ref|AP_001070.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli str. K-12 substr. W3110] gi|170080006|ref|YP_001729326.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli str. K-12 substr. DH10B] gi|238899708|ref|YP_002925504.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli BW2952] gi|256023963|ref|ZP_05437828.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia sp. 4_1_40B] gi|300947929|ref|ZP_07162077.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 116-1] gi|300957985|ref|ZP_07170150.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 175-1] gi|301025693|ref|ZP_07189209.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 196-1] gi|301647343|ref|ZP_07247155.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 146-1] gi|307137063|ref|ZP_07496419.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli H736] gi|331640937|ref|ZP_08342072.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli H736] gi|2501357|sp|P77488|DXS_ECOLI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|229813440|sp|B1XF08|DXS_ECODH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|259645381|sp|C4ZTH7|DXS_ECOBW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|1773104|gb|AAB40176.1| similar to H. influenzae HI1439 [Escherichia coli] gi|1786622|gb|AAC73523.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli str. K-12 substr. MG1655] gi|2665586|gb|AAC46162.1| D-1-deoxyxylulose 5-phosphate synthase [Escherichia coli] gi|85674560|dbj|BAE76200.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli str. K12 substr. W3110] gi|169887841|gb|ACB01548.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli str. K-12 substr. DH10B] gi|238859739|gb|ACR61737.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Escherichia coli BW2952] gi|260450393|gb|ACX40815.1| deoxyxylulose-5-phosphate synthase [Escherichia coli DH1] gi|299880005|gb|EFI88216.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 196-1] gi|300315321|gb|EFJ65105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 175-1] gi|300452529|gb|EFK16149.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 116-1] gi|301074488|gb|EFK89294.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 146-1] gi|309700682|emb|CBI99978.1| 1-deoxyxylulose-5-phosphate synthase [Escherichia coli ETEC H10407] gi|315135102|dbj|BAJ42261.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli DH1] gi|315616640|gb|EFU97257.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 3431] gi|323938605|gb|EGB34854.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli E1520] gi|323943226|gb|EGB39382.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli E482] gi|331037735|gb|EGI09955.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli H736] Length = 620 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|317491186|ref|ZP_07949622.1| oxoglutarate dehydrogenase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920733|gb|EFV42056.1| oxoglutarate dehydrogenase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 935 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+ N++ V + ++ NNQ TS + + T + + Sbjct: 352 LPITIHGDAAIAGQGIVQETLNMSQARGYEVGGTVRIVINNQIGFTTSNPKDARSTQYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV A+ + K ++I+++ YR GH+ +D Sbjct: 412 DIAKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEAD 466 >gi|225446174|ref|XP_002271782.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 815 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A + + GDGA GQ YE+ N A Sbjct: 273 SIYDAFGAGHS--STSISAGLGMAAGRDLLGKNNNVISVIGDGAMTAGQAYEAMNNAGYL 330 Query: 208 NLNVIYVI-ENNQYAMGTSV 226 + N+I ++ +N Q ++ T+ Sbjct: 331 DSNLIIILNDNGQVSLPTAT 350 >gi|254490450|ref|ZP_05103636.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophaga thiooxidans DMS010] gi|224464194|gb|EEF80457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophaga thiooxydans DMS010] Length = 466 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 46/218 (21%), Positives = 80/218 (36%), Gaps = 49/218 (22%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + + V GDGA GQ YE+ A + N++ ++ Sbjct: 113 GVGHSSTSISAALGMALAAQANDDPRHAVAIIGDGALTAGQAYEALAHAGDLSANLLVIL 172 Query: 216 ENNQYAMGTSV------------------SRASAQTNFSKRGVSFNI------------- 244 +N+ ++ +V +R ++ K ++ I Sbjct: 173 NDNEMSISKNVGGMANYLAKLLSGNFYTSAREGSKKVLEKIPPAWEIARRAEEHMKGMVV 232 Query: 245 PGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD-- 291 PG +DG DI + AT+ R KGP + ++T + +G ++ Sbjct: 233 PGTLFEEMGFNYIGPIDGHDIDTLIATLSN----LRKRKGPQFLHIVTKKGKGFEPAEKQ 288 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 P Y N +S+ QV R L + + DL Sbjct: 289 PCKYHGVSPANS-KSSGPSYTQVFGRWLCDMAKQDKDL 325 >gi|148545811|ref|YP_001265913.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida F1] gi|166201530|sp|A5VXW9|DXS_PSEP1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|148509869|gb|ABQ76729.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida F1] Length = 631 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 48/184 (26%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + + S + + GDGA G +E+ N A N +++ ++ Sbjct: 126 GVGHSSTSISAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVIL 185 Query: 216 ENNQYAMGTSV------------SRASAQTNFSKRGVSFNIPGM---------------- 247 +N ++ +V SR A + V +PG Sbjct: 186 NDNDMSISRNVGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAWEIARRTEEYAKGMLV 245 Query: 248 --------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--D 291 +DG D+ + AT+ R KGP + ++T + +G + + D Sbjct: 246 PGTLFEELGWNYIGPIDGHDLPTMIATLRN----MRDLKGPQFLHVVTKKGKGFAPAEID 301 Query: 292 PANY 295 P Y Sbjct: 302 PIGY 305 >gi|253699519|ref|YP_003020708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sp. M21] gi|251774369|gb|ACT16950.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M21] Length = 635 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 2/84 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A A + + GDG+ G +E+ N A Sbjct: 107 SPHDAFGVGHS--STSISAGLGMAVAQGLKEDAARIISVIGDGSLTGGMAFEALNQAGHL 164 Query: 208 NLNVIYVIENNQYAMGTSVSRASA 231 N+I V+ +N+ ++ +V S+ Sbjct: 165 KKNLIVVLNDNEMSISKNVGALSS 188 >gi|308186071|ref|YP_003930202.1| 2-oxoglutarate dehydrogenase E1 component [Pantoea vagans C9-1] gi|308056581|gb|ADO08753.1| 2-oxoglutarate dehydrogenase E1 component [Pantoea vagans C9-1] Length = 935 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGAA-NQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+ N++ V + ++ NNQ TS + + T + + Sbjct: 352 LPITIHGDAAVIGQGVVQETLNMSQARGYEVGGTVRIVINNQVGFTTSNPKDARSTPYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 G P V+ D AV A+ Y K + I+++ YR GH+ +D Sbjct: 412 DIGKMVLAPIFHVNADDPEAVAFVTRLALDYRNTFKRDVFIDLVCYRRHGHNEAD 466 >gi|293393824|ref|ZP_06638131.1| transketolase [Serratia odorifera DSM 4582] gi|291423651|gb|EFE96873.1| transketolase [Serratia odorifera DSM 4582] Length = 282 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 14/176 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A A + + S DG ++G +E+ AA + L N+I +++ Sbjct: 118 GSLGQGLSIAVGMALALRQKHSRSWVYNSMSDGELDEGSTWEAAMSAAHYGLNNLINIVD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--P 274 NQ + + +F +VDG D+ AV D+A + H+G P Sbjct: 178 VNQQQADGDSRQILGFEPLQDKWAAFGWYVQRVDGNDLAAVIRAFDQA----KDHQGEQP 233 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 +I T +G + TR++ + +R + D +Q L N+ EG L+ Sbjct: 234 RVILCDTLMGKGVPFLE-----TRDKNHFIRVDADEWQQAIAVLDANQ--PEGALQ 282 >gi|289668682|ref|ZP_06489757.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 638 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ I K K G + Y G+ +S G+A A + D+ V Sbjct: 87 LTGRRDQIHTVKQKDGVAPFPKREESIYDTFGVGHSSTSISAALGMAIAAQRNGDDRKVV 146 Query: 185 VCFGDGAANQGQVYESFNIAALWN--LNVIYVIENNQYAMGTSV 226 GDGA G VYE+ N A + N++ ++ +N+ ++ +V Sbjct: 147 AVIGDGAMTAGMVYEALNHAGGMDPEPNLLVILNDNRMSISEAV 190 >gi|77463513|ref|YP_353017.1| transketolase [Rhodobacter sphaeroides 2.4.1] gi|77387931|gb|ABA79116.1| transketolase [Rhodobacter sphaeroides 2.4.1] Length = 672 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 13/142 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNL- 209 G +G +++ G+A A + R+ D GDG +G E+ +A L Sbjct: 124 GPLGQGLAMSVGLAMAEESLRARWGAKIIDHYTYCIAGDGCLMEGVSQEAIGLAGRHELS 183 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 ++I + +NN + VS S +T+ R + + DG D A +D+A+ + Sbjct: 184 HLIVMWDNNGITIDGKVS-LSDRTDQKARFAAAGWDVFECDGHD----PADIDRALTAAK 238 Query: 270 AHKGPIIIEMLTYRYRGHSMSD 291 A KGP I T+ G S D Sbjct: 239 ASKGPAFIACTTHIALGSSAQD 260 >gi|294667556|ref|ZP_06732771.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602676|gb|EFF46112.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 651 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ I K K G + Y G+ +S G+A A + D+ V Sbjct: 100 LTGRRDQIHTVKQKDGVAPFPKREESIYDTFGVGHSSTSISAALGMAIAAQRNGDDRKVV 159 Query: 185 VCFGDGAANQGQVYESFNIAALWN--LNVIYVIENNQYAMGTSV 226 GDGA G VYE+ N A + N++ ++ +N+ ++ +V Sbjct: 160 AVIGDGAMTAGMVYEALNHAGGMDPEPNLLVILNDNRMSISEAV 203 >gi|238918994|ref|YP_002932508.1| 1-deoxy-D-xylulose-5-phosphate synthase [Edwardsiella ictaluri 93-146] gi|259645382|sp|C5BCH9|DXS_EDWI9 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|238868562|gb|ACR68273.1| 1-deoxy-D-xylulose-5-phosphate synthase, putative [Edwardsiella ictaluri 93-146] Length = 621 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 58/218 (26%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ I+ + KGG +H F S + GH +S G G+A A + + Sbjct: 88 LTGRRDRIATIRQKGG-LHPFPWRDESEYDTLSVGHS--STSISAGLGMAVAAEREGLGR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS---AQTNFSKR 238 V GDGA G +E+ N A +++ V+ +N+ ++ +V + AQ K Sbjct: 145 RTVCVIGDGAMTAGMAFEAMNHAGDIKADMLVVLNDNEMSISENVGALNNHLAQLLSGKL 204 Query: 239 GVSFN----------------------------IPGM-----------QVDGMDIRAVKA 259 S +PG VDG D++A+ A Sbjct: 205 YASLREGGKKMLSGLPPIKELVKRTEEHLKGMVVPGTLFEELGFNYIGPVDGHDVQALVA 264 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 T+ R KGP ++ ++T + +G++ + DP ++ Sbjct: 265 TLKN----MRDLKGPQLLHIMTKKGKGYAPAEKDPISW 298 >gi|257783939|ref|YP_003179156.1| UbiC transcription regulator-associated domain-containing protein [Atopobium parvulum DSM 20469] gi|257472446|gb|ACV50565.1| UbiC transcription regulator-associated domain protein [Atopobium parvulum DSM 20469] Length = 579 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 29/126 (23%), Positives = 60/126 (47%), Gaps = 9/126 (7%) Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTS 225 G G++F K S C++ GDG ++G ++ES L NV +++ N+ + Sbjct: 431 GLGLSFRRKDLPSRVFCIL--GDGECDEGSIWESAAFIGHNQLSNVTVIVDQNRMQLDGP 488 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + +++ +F ++VDG D+ A+ + + +A K +II T + + Sbjct: 489 CASILDTGSIARKFDAFGFESIEVDGHDVLALYDALKE-----KASKPRVIIAH-TIKGK 542 Query: 286 GHSMSD 291 G S ++ Sbjct: 543 GFSFAE 548 >gi|331018962|gb|EGH99018.1| transketolase, N-terminal subunit [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 278 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI-E 216 G +G + + G+A A K S+K V GDG +G +E+ AA + L+ ++VI + Sbjct: 121 GALGHGLPVAVGLALAAKMSGSNKRIYVLTGDGELAEGSNWEAAMAAAKYGLDNLFVIVD 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N+ + + + +F + DG D+ + A+ + + KG P Sbjct: 181 KNKLQLAGLTAEIMPLDPLDAKWAAFGFTVSECDGNDV----GQLVTALEHMQLRKGAPQ 236 Query: 276 IIEMLTYRYRGHSM 289 ++ T + RG S Sbjct: 237 VLIAHTIKGRGVSF 250 >gi|325956069|ref|YP_004286679.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus acidophilus 30SC] gi|325332634|gb|ADZ06542.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus acidophilus 30SC] Length = 580 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 14/144 (9%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 Y G ++L TG+A A + + GDG+ G YE N A + N++ Sbjct: 115 YYAVGHTSTSIALATGMAKARDLMGRHENIMALIGDGSMTGGLAYEGLNNAVIEKHNIVV 174 Query: 214 VIENNQYAMGTSVS------RASAQTNFSKRGVSFNIPGMQ----VDGMDIRAVKATMDK 263 V+ +NQ ++ +V + +N + F G DG D++ +M Sbjct: 175 VVNDNQMSIDENVGGLVTALKKLRDSNGETKENPFTAMGFDYRYVADGNDVK----SMID 230 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGH 287 A + PI++ + T + +G+ Sbjct: 231 AFKAVKDVDHPILLHINTLKGKGY 254 >gi|301170228|emb|CBW29832.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring [Haemophilus influenzae 10810] Length = 620 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G GIA A + + + V GDGA G +E+ N A + +++ ++ +N+ ++ Sbjct: 123 ISAGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSIS 182 Query: 224 TSV 226 +V Sbjct: 183 ENV 185 >gi|295103811|emb|CBL01355.1| transketolase subunit A [Faecalibacterium prausnitzii SL3/3] Length = 283 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 13/166 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A K+ S GDG +G+ +E+F AA + L N+ +++ Sbjct: 118 GSLGQGISAACGMALGAKHAGSAVNVYAILGDGEVEEGECWEAFMFAAHYGLSNLCVMLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + + +FN + ++G D +++ + A+ + P Sbjct: 178 RNHLQIDGTTETVMNSAPLEDKLRAFNFNVVTINGHDFDQIESAVQ---AFHAETEKPTC 234 Query: 277 IEMLTYRYRGHS-MSD--------PANYRTREEINEMRSNHDPIEQ 313 I + T + G S M++ P + + +NE+ + + +EQ Sbjct: 235 IILDTVKGTGVSYMTNSVAWHGKGPNDEEYQVAMNELNAAYAALEQ 280 >gi|317047345|ref|YP_004114993.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pantoea sp. At-9b] gi|316948962|gb|ADU68437.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pantoea sp. At-9b] Length = 935 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+ N++ V + ++ NNQ TS + T + + Sbjct: 352 LPITIHGDAAVTGQGVVQETLNMSQARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 G P V+ D AV A+ Y K + I+++ YR GH+ +D Sbjct: 412 DIGKMVQAPIFHVNADDPEAVAFVTRLALDYRNTFKRDVFIDLVCYRRHGHNEAD 466 >gi|323693773|ref|ZP_08107968.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium symbiosum WAL-14673] gi|323502159|gb|EGB18026.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium symbiosum WAL-14673] Length = 629 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 11/116 (9%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A + V GDGA G YE+ N AA Sbjct: 105 SPFDAFDTGHS--STSISAGLGMAQGRDVLGEEYSIVSVIGDGALTGGMAYEALNNAARL 162 Query: 208 NLNVIYVIENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDI 254 N I V+ +N+ ++ +V RA N K+ V+ + + + G D+ Sbjct: 163 KKNFIIVLNDNKMSISENVGGISRYLSNLRADEGYNLLKKNVAGTLAKVPMIGNDL 218 >gi|319897072|ref|YP_004135267.1| 1-deoxy-d-xylulose 5-phosphate synthase [Haemophilus influenzae F3031] gi|317432576|emb|CBY80936.1| 1-deoxy-D-xylulose 5-phosphate synthase [Haemophilus influenzae F3031] Length = 621 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G GIA A + + + V GDGA G +E+ N A + +++ ++ +N+ ++ Sbjct: 123 ISAGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSIS 182 Query: 224 TSV 226 +V Sbjct: 183 ENV 185 >gi|297735323|emb|CBI17763.3| unnamed protein product [Vitis vinifera] Length = 690 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 3/85 (3%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A + + GDGA GQ YE+ N A Sbjct: 148 SIYDAFGAGHS--STSISAGLGMAAGRDLLGKNNNVISVIGDGAMTAGQAYEAMNNAGYL 205 Query: 208 NLNVIYVI-ENNQYAMGTSVSRASA 231 + N+I ++ +N Q ++ T+ A Sbjct: 206 DSNLIIILNDNGQVSLPTATVDGPA 230 >gi|145632791|ref|ZP_01788524.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 3655] gi|145634983|ref|ZP_01790690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittAA] gi|144986447|gb|EDJ93013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 3655] gi|145267849|gb|EDK07846.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittAA] Length = 625 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G GIA A + + + V GDGA G +E+ N A + +++ ++ +N+ ++ Sbjct: 127 ISAGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSIS 186 Query: 224 TSV 226 +V Sbjct: 187 ENV 189 >gi|294660202|ref|NP_852812.2| transketolase [Mycoplasma gallisepticum str. R(low)] gi|284811852|gb|AAP56380.2| transketolase [Mycoplasma gallisepticum str. R(low)] gi|284930273|gb|ADC30212.1| transketolase [Mycoplasma gallisepticum str. R(high)] Length = 662 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 21/132 (15%) Query: 161 GAQVSLGTGIAFANKYRRSDKI------CVVCFGDGAANQGQVYESFNIAALWNLN-VIY 213 GA S+G IA AN R DKI C++ GDG +G E+ +A + LN +I+ Sbjct: 120 GAATSVGFAIAEANLSARFDKIINHYTYCLI--GDGDLQEGVCQEALAVAGRYKLNKLIW 177 Query: 214 VIENNQYAMGTSVSRASAQTNFS----KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 + ++N + R TNF + +N ++ DG D +A+ A+A + Sbjct: 178 LYDSNDVQLD---GRVENSTNFDVEMLLKSYRWNYILIK-DGNDYQAI----SNAIAQAK 229 Query: 270 AHKGPIIIEMLT 281 P IE+ T Sbjct: 230 KSDKPTFIEVKT 241 >gi|126462369|ref|YP_001043483.1| transketolase [Rhodobacter sphaeroides ATCC 17029] gi|126104033|gb|ABN76711.1| transketolase [Rhodobacter sphaeroides ATCC 17029] Length = 672 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 13/142 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLN 210 G +G +++ G+A A + R+ D GDG +G E+ +A L+ Sbjct: 124 GPLGQGLAMSVGLAMAEESLRARWGAKIIDHYTYCIAGDGCLMEGVSQEAIGLAGRHELS 183 Query: 211 -VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 +I + +NN + VS S +T+ R + + DG D A +D+A+ + Sbjct: 184 HLIVMWDNNGITIDGKVS-LSDRTDQKARFAAAGWDVFECDGHD----PADIDRALTEAK 238 Query: 270 AHKGPIIIEMLTYRYRGHSMSD 291 A KGP I T+ G S D Sbjct: 239 ASKGPAFIACTTHIALGSSAQD 260 >gi|310640911|ref|YP_003945669.1| oxoglutarate dehydrogenase (succinyl-transferring), e1 component [Paenibacillus polymyxa SC2] gi|309245861|gb|ADO55428.1| Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component [Paenibacillus polymyxa SC2] Length = 965 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALW---NLNVIYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A +G V ES N L N +++I NN+ T + + Sbjct: 364 SKAATIIMHGDAAFPGEGIVAESLNFTNLRGFRNGGTVHIIVNNRLGFTTESVDSRSTRY 423 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 S + IP + V+ + A A A Y K +I+++ YR GH+ SD Sbjct: 424 ASDLAKGYEIPIVHVNADNPEACIAAARMAGEYRNRFKKDFLIDLIGYRRYGHNESD 480 >gi|297518957|ref|ZP_06937343.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli OP50] Length = 409 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLNDNEMSISENV 189 >gi|296122687|ref|YP_003630465.1| deoxyxylulose-5-phosphate synthase [Planctomyces limnophilus DSM 3776] gi|296015027|gb|ADG68266.1| deoxyxylulose-5-phosphate synthase [Planctomyces limnophilus DSM 3776] Length = 630 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 13/143 (9%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH GA VS G+ + D+ V GDGA G V+E+ N AA +++ Sbjct: 113 FMTGHA--GASVSTVLGLKAGDDLAGEDRKSVAVIGDGALPSGVVFEAMNNAAELKKDML 170 Query: 213 YVIENNQYAMGTSV---------SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 ++ +N+ + V +R++ + KR ++ + + V G + + + Sbjct: 171 VILNDNKMGICPRVGGLAQYLDKARSAPMYDGLKRDITRFLKSVPVVGESAKQTLSQIKD 230 Query: 264 AVAYCRAHKGPIIIEMLTYRYRG 286 AV H G ++ E + ++Y G Sbjct: 231 AVK-GMLHGG-MLFEEMGFKYIG 251 >gi|254477462|ref|ZP_05090848.1| transketolase [Ruegeria sp. R11] gi|214031705|gb|EEB72540.1| transketolase [Ruegeria sp. R11] Length = 673 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 11/141 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLN 210 G +G ++ G A A + +R+ D V GDG +G E+ +A +L Sbjct: 124 GPLGQGIANAVGFAMAEEMQRAQYGRKLVDHHTYVIAGDGCLMEGVSQEAIGLAGRHSLG 183 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 + V+ +N S +TN +R + ++DG D +A+ D A+ + Sbjct: 184 KLIVLWDNNNITIDGTVELSDRTNQVQRFKASGWHVQEIDGHDPKAI----DAAIEAAKK 239 Query: 271 HKGPIIIEMLTYRYRGHSMSD 291 K P +I T+ GH+ D Sbjct: 240 TKKPSMIACKTHIALGHAAQD 260 >gi|150024387|ref|YP_001295213.1| 1-deoxy-D-xylulose-5-phosphate synthase [Flavobacterium psychrophilum JIP02/86] gi|149770928|emb|CAL42393.1| 1-deoxy-D-xylulose-5-phosphate synthase [Flavobacterium psychrophilum JIP02/86] Length = 590 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 33/185 (17%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS G S + F GH LG IA + + Sbjct: 83 LTGRRDNFHTNRKLGGIS---GFPKRSESIYDAFGVGHSSTSISAILGMAIA---SHIKG 136 Query: 180 D--KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 D K + GD + G +E N A + N N++ ++ +N + SV K Sbjct: 137 DFNKQHIAVIGDASIASGMAFEGLNHAGVTNANLLVILNDNAIGIDPSVGALKDYLTAVK 196 Query: 238 RG-----------VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 G ++F+ G +DG DI AV K + + KGP + ++T + +G Sbjct: 197 EGKNHKDNNMIKSLNFDYSG-PIDGHDIFAVV----KELQRLQNIKGPKFLHIITTKGKG 251 Query: 287 HSMSD 291 +++ Sbjct: 252 LQLAE 256 >gi|82523973|emb|CAI78784.1| Deoxyxylulose-5-phosphate synthase [uncultured epsilon proteobacterium] Length = 606 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 20/83 (24%), Positives = 37/83 (44%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH + +G A A K ++ ++ V GDG+ G VYE+ N Sbjct: 96 SKHDYFVAGHSSTSISLGVGAAKAIALKGEQNSRVPVCMIGDGSMTAGMVYEALNELGDR 155 Query: 208 NLNVIYVIENNQYAMGTSVSRAS 230 +I ++ +N+ ++ + S Sbjct: 156 KYPMIIILNDNEMSIAKPIGAIS 178 >gi|323484857|ref|ZP_08090213.1| hypothetical protein HMPREF9474_01964 [Clostridium symbiosum WAL-14163] gi|323401853|gb|EGA94195.1| hypothetical protein HMPREF9474_01964 [Clostridium symbiosum WAL-14163] Length = 629 Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 11/116 (9%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+A + V GDGA G YE+ N AA Sbjct: 105 SPFDAFDTGHS--STSISAGLGMAQGRDVLGEEYSIVSVIGDGALTGGMAYEALNNAARL 162 Query: 208 NLNVIYVIENNQYAMGTSVS---------RASAQTNFSKRGVSFNIPGMQVDGMDI 254 N I V+ +N+ ++ +V RA N K+ V+ + + + G D+ Sbjct: 163 KKNFIIVLNDNKMSISENVGGISRYLSNLRADEGYNLLKKNVAGTLAKVPMIGNDL 218 >gi|257464787|ref|ZP_05629158.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus minor 202] gi|257450447|gb|EEV24490.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus minor 202] Length = 617 Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ I + K G +H F S + GH +S G GIA A + + + Sbjct: 85 LTGRRDQIKTIRQKDG-IHPFPWREESVYDVLSVGHS--STSISAGLGIAVAAEKENAGR 141 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 142 KTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSISENV 186 >gi|213857761|ref|ZP_03384732.1| putative transketolase N-terminal section [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 186 Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 8/71 (11%) Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKIC-----VVCF-GDGAANQGQVYESFNIAALWNLN 210 HG+ SLG GI+ A S K+ V C GDG N+GQ +E+F A LN Sbjct: 108 HGVDATTGSLGQGISIAGGMALSHKLARRPNRVFCIVGDGELNEGQCWEAFQFIAHHRLN 167 Query: 211 --VIYVIENNQ 219 +++ N Q Sbjct: 168 NLTVFIDWNKQ 178 >gi|145636151|ref|ZP_01791821.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittHH] gi|148825982|ref|YP_001290735.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittEE] gi|229846703|ref|ZP_04466810.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 7P49H1] gi|166198620|sp|A5UC51|DXS_HAEIE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|145270673|gb|EDK10606.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittHH] gi|148716142|gb|ABQ98352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittEE] gi|229810192|gb|EEP45911.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 7P49H1] Length = 625 Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G GIA A + + + V GDGA G +E+ N A + +++ ++ +N+ ++ Sbjct: 127 ISAGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSIS 186 Query: 224 TSV 226 +V Sbjct: 187 ENV 189 >gi|15645702|ref|NP_207879.1| transketolase [Helicobacter pylori 26695] gi|2314236|gb|AAD08131.1| transketolase A (tktA) [Helicobacter pylori 26695] Length = 641 Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A L Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLC-GDGDLQEGISYESASLAGHLRL 178 Query: 210 -NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N+I + ++NQ ++ +++ S R V+ N ++ DG D +A+ +++A Sbjct: 179 DNLIVIYDSNQISIEGAIN-ISFSEQVKTRFVAQNWEVLECDGHDYQAIHNALEEA 233 >gi|21243297|ref|NP_642879.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas axonopodis pv. citri str. 306] gi|24211661|sp|Q8PJG7|DXS_XANAC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|21108837|gb|AAM37415.1| deoxyxylulose-5-phosphate synthase [Xanthomonas axonopodis pv. citri str. 306] Length = 638 Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ I K K G + Y G+ +S G+A A + D+ V Sbjct: 87 LTGRRDQIHTVKQKDGVAPFPKREESIYDTFGVGHSSTSISAALGMAIAAQRNGDDRKVV 146 Query: 185 VCFGDGAANQGQVYESFNIAALWN--LNVIYVIENNQYAMGTSV 226 GDGA G VYE+ N A + N++ ++ +N+ ++ +V Sbjct: 147 AVIGDGAMTAGMVYEALNHAGGMDPEPNLLVILNDNRMSISEAV 190 >gi|329123444|ref|ZP_08252008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus aegyptius ATCC 11116] gi|327471026|gb|EGF16481.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus aegyptius ATCC 11116] Length = 340 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ +S + K G +H F + + GH +S G GIA A + + + Sbjct: 88 LTGRRDQMSTIRQKDG-IHPFPWREESEFDVLSVGHS--STSISAGLGIAVAAERENAGR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 145 KTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSISENV 189 >gi|300214116|gb|ADJ78532.1| 1-deoxy-D-xylulose 5-phosphate synthase [Lactobacillus salivarius CECT 5713] Length = 586 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 66/167 (39%), Gaps = 29/167 (17%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH ++L TG+A A + + V GDG+ + G E N AA Sbjct: 111 SEHDYFKVGH--TSTSIALATGMAKARDMKDENGNIVAVIGDGSMSGGLALEGLNNAAKL 168 Query: 208 NLNVIYVIENNQ----------YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N+I + +NQ Y M + + Q+ S N+ + G+D R V Sbjct: 169 KSNLIIIFNDNQMSIDDVNGGMYKMFAELRETNGQS-------SNNL--FKAMGLDYRYV 219 Query: 258 K-----ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 TM + + PI++ + T + G+ PA R RE Sbjct: 220 DNGNDLETMISVLEEVKDIDHPIVVHINTLKGEGYQ---PAIERKRE 263 >gi|260914111|ref|ZP_05920584.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pasteurella dagmatis ATCC 43325] gi|260631744|gb|EEX49922.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pasteurella dagmatis ATCC 43325] Length = 614 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G GIA A + + + V GDGA G +E+ N A + +++ ++ +N+ ++ Sbjct: 123 ISAGLGIAIAAQKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSIS 182 Query: 224 TSV 226 +V Sbjct: 183 ENV 185 >gi|260583061|ref|ZP_05850843.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae NT127] gi|260093912|gb|EEW77818.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae NT127] Length = 625 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G GIA A + + + V GDGA G +E+ N A + +++ ++ +N+ ++ Sbjct: 127 ISAGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSIS 186 Query: 224 TSV 226 +V Sbjct: 187 ENV 189 >gi|302548197|ref|ZP_07300539.1| putative transketolase subunit A [Streptomyces hygroscopicus ATCC 53653] gi|302465815|gb|EFL28908.1| putative transketolase subunit A [Streptomyces himastatinicus ATCC 53653] Length = 276 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 16/136 (11%) Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAMGT 224 + TG+A +++ SD DG ++G +E+ A L NV +++ N Sbjct: 109 VATGMALGLRHQGSDAHVYNLLSDGELDEGSTWEAALACAHHGLDNVTAIVDVNALQADG 168 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PII------- 276 S + + +F ++VDG DI A+ A D R H+G P + Sbjct: 169 PTSGVLRTEPVTAKWEAFGWHAIRVDGNDIDALVAAFDS----LREHRGSPAVLVCDTRI 224 Query: 277 ---IEMLTYRYRGHSM 289 + ML R + H M Sbjct: 225 GCGVPMLETREKAHFM 240 >gi|68250029|ref|YP_249141.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 86-028NP] gi|81335547|sp|Q4QKG6|DXS_HAEI8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|68058228|gb|AAX88481.1| 1-deoxy-D-xylulose 5-phosphate synthase [Haemophilus influenzae 86-028NP] Length = 625 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G GIA A + + + V GDGA G +E+ N A + +++ ++ +N+ ++ Sbjct: 127 ISAGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSIS 186 Query: 224 TSV 226 +V Sbjct: 187 ENV 189 >gi|300087808|ref|YP_003758330.1| deoxyxylulose-5-phosphate synthase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527541|gb|ADJ26009.1| deoxyxylulose-5-phosphate synthase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 639 Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust. Identities = 48/216 (22%), Positives = 79/216 (36%), Gaps = 68/216 (31%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS G + S + F GH +S G+A A Sbjct: 82 LTGRREQFSTLRQYGGIS---GFTCREESQHDAFTAGHA--STSISAALGMAVARDLTGG 136 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV---SRASAQTNFS 236 D + GDGA G E+ N A +I ++ +N ++ +V S+ ++ F Sbjct: 137 DNHVIAVIGDGAITGGMALEALNNAGHLGRRLIVILNDNGMSISPTVGATSKIFSRIRFD 196 Query: 237 KR---------------------------------------------GVSFNIPGMQVDG 251 +R G ++ P +DG Sbjct: 197 RRYYRVSEKSRNILKRSRWGGRLWGFGQRVKGSIKRMVMPTILWEEFGFAYTGP---IDG 253 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 DI + A +++A Y AHK P +I ++T + +G+ Sbjct: 254 HDISQITAVLEQAKNY--AHK-PTLIHIVTTKGKGY 286 >gi|218130264|ref|ZP_03459068.1| hypothetical protein BACEGG_01852 [Bacteroides eggerthii DSM 20697] gi|217987548|gb|EEC53876.1| hypothetical protein BACEGG_01852 [Bacteroides eggerthii DSM 20697] Length = 589 Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust. Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 32/196 (16%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH VSL G+A A + + GDG+ + G+ +E N AA Sbjct: 105 SEHDFFVIGH--TSTSVSLACGLAKARDLKGDTGNVIAVIGDGSLSGGEAFEGLNNAAEL 162 Query: 208 NLNVIYVIENNQYAMGTS------------VSRASAQTNFSKRGVSFNIPGMQV-DGMDI 254 N I ++ +NQ ++ + + A NF + + + + V DG D+ Sbjct: 163 GTNFIVIVNDNQMSIAENHGGLYRNLQLLRETNGQAPCNFFR---AMGLDYLYVKDGNDV 219 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD----------PANYRTREEINEM 304 +A+ + + PI++ + T + +G ++ P + T E + ++ Sbjct: 220 QALVDAFQR----VKDIDHPIVVHINTLKGKGFKFAEQQQERFHYSIPFSLETGELLADL 275 Query: 305 RSNHDPIEQVRKRLLH 320 + D + + LLH Sbjct: 276 GNAEDYADLTAEYLLH 291 >gi|170719765|ref|YP_001747453.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida W619] gi|229836073|sp|B1J3G4|DXS_PSEPW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|169757768|gb|ACA71084.1| deoxyxylulose-5-phosphate synthase [Pseudomonas putida W619] Length = 631 Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust. Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 48/184 (26%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + + S + + GDGA G +E+ N A N +++ ++ Sbjct: 126 GVGHSSTSISAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVIL 185 Query: 216 ENNQYAMGTSV------------SRASAQTNFSKRGVSFNIPGM---------------- 247 +N ++ +V SR A + V +PG Sbjct: 186 NDNDMSISRNVGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAWEIARRTEEYAKGMLV 245 Query: 248 --------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--D 291 +DG D+ + AT+ R KGP + ++T + +G + + D Sbjct: 246 PGTLFEELGWNYIGPIDGHDLPTMIATLRN----MRDLKGPQFLHVVTKKGKGFAPAEID 301 Query: 292 PANY 295 P Y Sbjct: 302 PIGY 305 >gi|58426234|gb|AAW75271.1| deoxyxylulose-5-phosphate synthase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 688 Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ I K K G + Y G+ +S G+A A + D+ V Sbjct: 137 LTGRRDQIHTVKQKDGVAPFPKREESVYDTFGVGHSSTSISAALGMAIAAQRNGDDRKVV 196 Query: 185 VCFGDGAANQGQVYESFNIAALWN--LNVIYVIENNQYAMGTSV 226 GDGA G VYE+ N A + N++ ++ +N+ ++ +V Sbjct: 197 AVIGDGAMTAGMVYEALNHAGGMDPEPNLLVILNDNRMSISEAV 240 >gi|16273346|ref|NP_439591.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae Rd KW20] gi|145629448|ref|ZP_01785246.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 22.1-21] gi|260580725|ref|ZP_05848551.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae RdAW] gi|1175801|sp|P45205|DXS_HAEIN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|1574278|gb|AAC23088.1| 1-deoxyxylulose-5-phosphate synthase (dxs) {Escherichia coli) [Haemophilus influenzae Rd KW20] gi|144978291|gb|EDJ88055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae 22.1-21] gi|260092542|gb|EEW76479.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae RdAW] Length = 625 Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G GIA A + + + V GDGA G +E+ N A + +++ ++ +N+ ++ Sbjct: 127 ISAGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSIS 186 Query: 224 TSV 226 +V Sbjct: 187 ENV 189 >gi|156553589|ref|XP_001600251.1| PREDICTED: hypothetical protein [Nasonia vitripennis] Length = 1012 Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust. Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 5/116 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLN---VIYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A + QG YE+ ++ L + VI+ + NNQ T + + + + Sbjct: 406 LAILVHGDAAYSGQGICYETMHLTKLPDYTTGGVIHSVINNQIGFTTDPRYSRSSAHCTD 465 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDP 292 G N P V D V A Y + ++++++ YR GH+ M +P Sbjct: 466 IGRIVNAPIFHVHADDPDLVAYCSKVASEYRAEYHNDVVLDIVGYRRNGHNEMDEP 521 >gi|251790665|ref|YP_003005386.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dickeya zeae Ech1591] gi|247539286|gb|ACT07907.1| deoxyxylulose-5-phosphate synthase [Dickeya zeae Ech1591] Length = 620 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ I+ + KGG +H F S + GH +S G G+A A ++ + Sbjct: 88 LTGRRDRIATIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGMAVAAEHEGQGR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIKPDMLVVLNDNEMSISENV 189 >gi|171464022|ref|YP_001798135.1| deoxyxylulose-5-phosphate synthase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193560|gb|ACB44521.1| deoxyxylulose-5-phosphate synthase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 633 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 52/246 (21%), Positives = 91/246 (36%), Gaps = 62/246 (25%) Query: 129 LTGRQGGIS-----KGKGGSMHMFSTK-NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ ++ KG G H ++ + F GH ++G AF K R + Sbjct: 80 LTGRRERMNTLRQYKGLSGFPHRSESEFDAFGTGHSSTSISAAMGMARAFQTKGER--HV 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAMGTSV--------------- 226 V GD A G +E+ N A ++ +L ++ ++ +N ++ +V Sbjct: 138 AVAVIGDSAMTGGMAFEAMNNAGVYDDLPLVVILNDNDMSISPAVGALNRHLARLLSGNI 197 Query: 227 ------------SRASAQTNFSKR----------------GVSFNIPGMQVDGMDIRAVK 258 S A F+KR FN G +DG D+ A+ Sbjct: 198 YSATKKSIDSVLSIAPPLREFAKRLEDHAKGMVSPSTIFQEFGFNYFG-PIDGHDLDALI 256 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYRTREEINEMRSNHDPIEQVRK 316 + +GP + ++T + +G+ + +DP Y + N P E V+K Sbjct: 257 PMLQNVRRLALEGRGPQFLHVVTKKGQGYELAEADPVLYHGPSKFN-------PEEGVKK 309 Query: 317 RLLHNK 322 + K Sbjct: 310 SVASKK 315 >gi|145638944|ref|ZP_01794552.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittII] gi|145271916|gb|EDK11825.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae PittII] gi|309750913|gb|ADO80897.1| 1-deoxyxylulose-5-phosphate synthase [Haemophilus influenzae R2866] Length = 625 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G GIA A + + + V GDGA G +E+ N A + +++ ++ +N+ ++ Sbjct: 127 ISAGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSIS 186 Query: 224 TSV 226 +V Sbjct: 187 ENV 189 >gi|327399141|ref|YP_004340010.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hippea maritima DSM 10411] gi|327181770|gb|AEA33951.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hippea maritima DSM 10411] Length = 622 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 2/96 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH G +S G+A S V GDG+ + G YE + A Sbjct: 105 SPYDTFNVGHA--GTSISAALGMALGRDLTNSSDHVVAIIGDGSLSCGIAYEGLDNAGYI 162 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + +++ V+ +N ++ S+ SA + G +N Sbjct: 163 DTDLVVVVNDNNMSISPSLGSLSAYLSKKMSGPIYN 198 >gi|313897020|ref|ZP_07830567.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sp. oral taxon 137 str. F0430] gi|312974467|gb|EFR39935.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sp. oral taxon 137 str. F0430] Length = 585 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 10/142 (7%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G +SL TG+A A + + GDG+ + G+ E N A N N+I V + Sbjct: 113 GHTSTSISLATGLAKARDLAGRKENIIAFIGDGSMSGGEALEGLNTAGAMNSNLIVVFND 172 Query: 218 NQYAMGTS---VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV-----KATMDKAVAYCR 269 N ++ + + RA + + N+ + G+D R V T+ A + + Sbjct: 173 NDQSIAENHGGMYRAFKELRETNGTSPNNL--FRAMGLDYRYVADGNDAETLIAAFSEVK 230 Query: 270 AHKGPIIIEMLTYRYRGHSMSD 291 + P+++ + T + +G+ ++ Sbjct: 231 DTEKPVVVHIATQKGKGYKFAE 252 >gi|289661730|ref|ZP_06483311.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 638 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ I K K G + Y G+ +S G+A A + D+ V Sbjct: 87 LTGRRDQIHTVKQKDGVAPFPKREESIYDTFGVGHSSTSISAALGMAIAAQRNGDDRKVV 146 Query: 185 VCFGDGAANQGQVYESFNIAALWN--LNVIYVIENNQYAMGTSV 226 GDGA G VYE+ N A + N++ ++ +N+ ++ +V Sbjct: 147 AVIGDGAMTAGMVYEALNHAGGMDPEPNLLVILNDNRMSISEAV 190 >gi|254779053|ref|YP_003057158.1| transketolase [Helicobacter pylori B38] gi|254000964|emb|CAX28908.1| Transketolase (TK) [Helicobacter pylori B38] Length = 641 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A L Sbjct: 120 GPLGQGFANAVGFSMASQYAQTLLDKEAISHKVYCLC-GDGDLQEGISYESTSLAGHLRL 178 Query: 210 -NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N+I + ++NQ ++ ++ S R V+ N ++ DG D +A+ +++A Sbjct: 179 DNLIVIYDSNQISIEGTID-ISFSEQVKMRFVAQNWEVLECDGHDYQAIHNALEEA 233 >gi|121308567|dbj|BAF43667.1| 1-deoxyxylulose-5-phosphate synthase [Photobacterium phosphoreum] Length = 621 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 51/220 (23%), Positives = 85/220 (38%), Gaps = 60/220 (27%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ +S + KGG +H F S + GH +S G G+A A + + Sbjct: 88 LTGRRDQMSTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGLGMAIAAEKEALGR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV--------------- 226 V GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 145 KVVSVIGDGAITAGMAFEAMNHAGDIHSDMLVILNDNEMSISENVGGLSNHLAHLLAGNF 204 Query: 227 ------------SRASAQTNFSKRG----------------VSFNIPGMQVDGMDIRAVK 258 S A KR + FN G +DG DI + Sbjct: 205 YASIREGGKKVLSNAPPIKEIVKRAEEHIKGMVVPSTMFEELGFNYIG-PIDGHDIDELV 263 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM--SDPANYR 296 T+ R KGP + ++T + +G++ +DP NY Sbjct: 264 KTLKN----MRHLKGPQFLHIMTKKGKGYAPAEADPINYH 299 >gi|148264229|ref|YP_001230935.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter uraniireducens Rf4] gi|146397729|gb|ABQ26362.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter uraniireducens Rf4] Length = 620 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 17/122 (13%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS G S + F GH +S G+A A ++ Sbjct: 78 LTGRREAFKTLRTLGGIS---GFPKRAESPHDAFDVGHS--STSISAALGMALARDLKQE 132 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 + GDG+ G YE N A N +++ ++ +N+ ++ +V A ++F R Sbjct: 133 HNKVLAVIGDGSMTGGLAYEGLNHAGHLNKDLVVILNDNEMSISENV---GALSSFLSRT 189 Query: 240 VS 241 ++ Sbjct: 190 IT 191 >gi|239813759|ref|YP_002942669.1| hypothetical protein Vapar_0750 [Variovorax paradoxus S110] gi|239800336|gb|ACS17403.1| domain of unknown function DUF1745 [Variovorax paradoxus S110] Length = 426 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 9/89 (10%) Query: 121 DASKIMAELTGRQ------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG-TGIAFA 173 D ++++ E+ GR GG+S G+GG++ NG GHG G S G +G+ F Sbjct: 135 DLTELIGEMAGRTDTGYLFGGLSSGRGGALQFAVGGNGNIRGHGAAGGVFSGGLSGVVFG 194 Query: 174 NKYRRSDKICVVC--FGDGAANQGQVYES 200 R ++ C GA + ++ E+ Sbjct: 195 EGVRLVSRVTQGCQPLRSGAGREREITEA 223 >gi|94502390|ref|ZP_01308847.1| Pyruvate dehydrogenase E1 component alpha subunit [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|94451051|gb|EAT14019.1| Pyruvate dehydrogenase E1 component alpha subunit [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] Length = 58 Score = 36.6 bits (83), Expect = 5.7, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 26/48 (54%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 N + L Y+ M R+FE+K LY + GF HL GQEA+ G+ Sbjct: 5 NNDIYLKWYKDMSFWRKFEDKCRSLYLKQKIRGFLHLYNGQEAIPAGL 52 >gi|238911445|ref|ZP_04655282.1| 1-deoxy-D-xylulose-5-phosphate synthase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 620 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + K G +H F S + GH +S G GIA A + D+ Sbjct: 88 LTGRRDKIGTIRQKAG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKDR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ ++ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >gi|71754643|ref|XP_828236.1| 2-oxoglutarate dehydrogenase subunit [Trypanosoma brucei TREU927] gi|70833622|gb|EAN79124.1| 2-oxoglutarate dehydrogenase subunit, putative [Trypanosoma brucei] Length = 1008 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 16/181 (8%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLN------VIYVIENNQYAMGTS---VSRASA 231 + ++ GD A + G +E+ LW+L+ +++I NNQ T RA Sbjct: 377 LPIIAHGDAAISGLGMGHETM---GLWDLDNYRVGGTVHIITNNQVGFTTDSVDARRAKY 433 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 ++ SK + P + V+ D+ A A + + III+++ YR GH+ +D Sbjct: 434 CSDISKIHAT---PVLHVNSNDVEACVRAARIAARFRQTFHRDIIIDLIGYRRNGHNEAD 490 Query: 292 PANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 ++ + +RS ++ L+ ++ D+K + + + E AQS Sbjct: 491 FPDFTQPQMYQIVRSLRPLVDLYSDTLVEEGVLTKEDVKAKKKEYESRLREAYETAQSCP 550 Query: 352 E 352 E Sbjct: 551 E 551 >gi|308068123|ref|YP_003869728.1| 2-oxoglutarate dehydrogenase E1 component (alpha-ketoglutarate dehydrogenase) [Paenibacillus polymyxa E681] gi|305857402|gb|ADM69190.1| 2-oxoglutarate dehydrogenase E1 component (Alpha-ketoglutarate dehydrogenase) [Paenibacillus polymyxa E681] Length = 961 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Query: 179 SDKICVVCFGDGA-ANQGQVYESFNIAALW---NLNVIYVIENNQYAMGTSVSRASAQTN 234 S ++ GD A +G V ES N L N +++I NN+ T + + Sbjct: 362 SKAATIIMHGDAAFPGEGIVAESLNFTNLRGFRNGGTVHIIVNNRLGFTTESVDSRSTRY 421 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 S + IP + V+ + A A A Y K +I+++ YR GH+ SD Sbjct: 422 ASDLAKGYEIPIVHVNADNPEACIAAARMAGEYRNRFKKDFLIDLIGYRRYGHNESD 478 >gi|302390240|ref|YP_003826061.1| transketolase subunit A [Thermosediminibacter oceani DSM 16646] gi|302200868|gb|ADL08438.1| transketolase subunit A [Thermosediminibacter oceani DSM 16646] Length = 275 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 1/109 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +GQV+E+ A+ + L N+ ++ Sbjct: 120 GSLGQGLSAANGMAIAAKLDGKDYRVYAVLGDGELQEGQVWEAAMAASHYKLDNLTAFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 +N + ++ + + +F + VDG D + +++AV Sbjct: 180 HNGLQIDGPIAEVMSPEIIQDKFRAFGWNVVDVDGHDFEDIIRGIEEAV 228 >gi|207110088|ref|ZP_03244250.1| transketolase [Helicobacter pylori HPKX_438_CA4C1] Length = 132 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 3/94 (3%) Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRAS 230 +K S K+ +C GDG +G YES ++A NL N+I + ++NQ ++ +++ S Sbjct: 4 LLDKEAISHKVYCLC-GDGDLQEGISYESASLAGHLNLSNLIVIYDSNQISIEGAIN-IS 61 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 R ++ N ++ DG D +A+ +++A Sbjct: 62 FSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEA 95 >gi|91771913|gb|ABE60813.1| CLA1-like protein [Brassica rapa] Length = 716 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 136 ISKGKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I G+ G M NG G G G +S G +A + + Sbjct: 152 ILTGRRGKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLRMAVGRDLKGKNNNV 211 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V GDGA GQ YE+ N A + ++I ++ +N+ Sbjct: 212 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 247 >gi|325276612|ref|ZP_08142351.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. TJI-51] gi|324098252|gb|EGB96359.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. TJI-51] Length = 282 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 18/71 (25%), Positives = 35/71 (49%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + + S + + GDGA G +E+ N A N +++ ++ Sbjct: 126 GVGHSSTSISAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVIL 185 Query: 216 ENNQYAMGTSV 226 +N ++ +V Sbjct: 186 NDNDMSISRNV 196 >gi|320120567|gb|EFE29003.2| 1-deoxy-D-xylulose-5-phosphate synthase [Filifactor alocis ATCC 35896] Length = 623 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 18/75 (24%), Positives = 34/75 (45%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S TG A + ++ + + GDG+ G YE+ + A LN+ ++ Sbjct: 111 GVGHASTSISAATGFAISRDQKKENNEVIAIIGDGSLTGGMAYEALDHAGHLGLNMTVIL 170 Query: 216 ENNQYAMGTSVSRAS 230 +N ++ +V S Sbjct: 171 NDNDMSIDKNVGSMS 185 >gi|326794292|ref|YP_004312112.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinomonas mediterranea MMB-1] gi|326545056|gb|ADZ90276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinomonas mediterranea MMB-1] Length = 636 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 5/87 (5%) Query: 154 YGGHGIVGAQVSLGT--GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 Y G+ + S+G G++ ANK ++ V GDGA + G +E+ N A ++ Sbjct: 120 YDTFGVGHSSTSIGAALGMSIANKTLGKNRKAVAVIGDGAMSAGMAFEALNHAGDVKADM 179 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKR 238 + ++ +N+ ++ V A +N+ R Sbjct: 180 LVILNDNEMSISAPV---GALSNYFSR 203 >gi|157144765|ref|YP_001452084.1| hypothetical protein CKO_00492 [Citrobacter koseri ATCC BAA-895] gi|157081970|gb|ABV11648.1| hypothetical protein CKO_00492 [Citrobacter koseri ATCC BAA-895] Length = 276 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Query: 158 GIVGAQVSLGTGIAFANKY--RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV- 214 G +G +S+ G+A ++K R + C+V GDG N+GQ +E+F A LN + V Sbjct: 115 GSLGQGISIAGGMALSHKLAGRPNRVFCIV--GDGELNEGQCWEAFQFIAHHRLNNLTVF 172 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 I+ N+ + + + + +F + V G DI Sbjct: 173 IDWNKQQLDGELDEIICPFDLEGKFRAFGFDVVTVKGDDI 212 >gi|150021623|ref|YP_001306977.1| transketolase [Thermosipho melanesiensis BI429] gi|149794144|gb|ABR31592.1| Transketolase [Thermosipho melanesiensis BI429] Length = 618 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 9/144 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G G+A A K ++ + V DG + +GQV E+ A +NL N+ +I+ Sbjct: 113 GNLGQGLSAGIGMAIAGKLKKENYHVFVVMSDGESAKGQVAEARRTARKFNLDNLTVIID 172 Query: 217 NNQYAM-GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 N + G + + + +N+ +++DG D + + A+ + K P Sbjct: 173 YNDIQISGRASNIMYVDLREEYQAADWNV--IEIDGHDFEQIIS----ALKIAKNDKKPT 226 Query: 276 IIEMLTYRYRGHS-MSDPANYRTR 298 +I T +G S M D Y + Sbjct: 227 VIIAHTIIGKGVSFMEDTPKYHGK 250 >gi|119356844|ref|YP_911488.1| transketolase subunit A [Chlorobium phaeobacteroides DSM 266] gi|119354193|gb|ABL65064.1| transketolase subunit A [Chlorobium phaeobacteroides DSM 266] Length = 303 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 9/128 (7%) Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNF 235 + +D C++ GDG +GQ++E+ AA ++L N+I +++ N + V + F Sbjct: 157 KNNDIYCLM--GDGECQEGQIWEAAMSAAHYDLGNLIGIVDCNSLQIDGEVQSVMSLEPF 214 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG-----HSMS 290 + +F DG DI V A++ + + K P ++ T +G SM Sbjct: 215 GDKWRAFGWEVYHCDGNDIEDVIASISR-IRDRDDRKSPAVLLATTIMGKGVPFFEGSMP 273 Query: 291 DPANYRTR 298 D +N+ + Sbjct: 274 DKSNWHGK 281 >gi|301341852|gb|ADK73609.1| 1-D-deoxyxylulose 5-phosphate synthase [Solanum tuberosum] Length = 719 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 31/64 (48%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G G+A + + + GDGA GQ YE+ N A + ++I ++ Sbjct: 184 GTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 243 Query: 216 ENNQ 219 +N+ Sbjct: 244 NDNR 247 >gi|301165689|emb|CBW25261.1| putative transketolase, thiamine disphosphate-binding subunit [Bacteriovorax marinus SJ] Length = 264 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 16/126 (12%) Query: 152 GFYGGHGIVGAQVSLGTGIAFA-----NKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 G + G +G +S+ G A + N YR ICVV DG +G ++E+ A Sbjct: 105 GVFFTSGSLGHGLSVAVGSALSDRLNGNNYRT---ICVV--SDGELQEGSIWEAALYAGA 159 Query: 207 WNLNVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA-----T 260 LN + VI +NN+ + +++ SF + +DG D A+ T Sbjct: 160 NKLNSLTVIIDNNKLQAFGETDDVVPMGDIAQKFTSFGFHSISIDGHDTNAINLALETNT 219 Query: 261 MDKAVA 266 DK +A Sbjct: 220 FDKPLA 225 >gi|212712445|ref|ZP_03320573.1| hypothetical protein PROVALCAL_03539 [Providencia alcalifaciens DSM 30120] gi|212684902|gb|EEB44430.1| hypothetical protein PROVALCAL_03539 [Providencia alcalifaciens DSM 30120] Length = 935 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A QG V E+ N++ V + ++ NNQ TS + + T + Sbjct: 352 LPITIHGDSAVTGQGVVQETLNMSQARGYEVGGTMRIVINNQVGFTTSNPKDTRSTEYCT 411 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V P V+ D AV A+ + K ++I+++ YR GH+ +D Sbjct: 412 DIVKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEAD 466 >gi|91978764|ref|YP_571423.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris BisB5] gi|123748724|sp|Q130G7|DXS_RHOPS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|91685220|gb|ABE41522.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris BisB5] Length = 638 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 32/68 (47%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A + + GDG+ + G YE+ N A N +I ++ +N ++ Sbjct: 123 ISAGLGMAVARDLAGGNNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIA 182 Query: 224 TSVSRASA 231 V SA Sbjct: 183 PPVGAMSA 190 >gi|320529515|ref|ZP_08030600.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas artemidis F0399] gi|320138226|gb|EFW30123.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas artemidis F0399] Length = 585 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 14/144 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G +SL TG+A A + + GDG+ + G+ E N A N N+I V + Sbjct: 113 GHTSTSISLATGLAKARDLAGRKENIIAFIGDGSMSGGEALEGLNTAGAMNSNLIVVFND 172 Query: 218 NQYAMGTS---VSRASA---QTNFSKRGVSFNIPGMQ----VDGMDIRAVKATMDKAVAY 267 N ++ + + RA +TN + F G+ DG D A+ A A + Sbjct: 173 NDQSIAENHGGMYRAFKELRETNGTSPNNLFRAMGLGYRYVADGNDAEALIA----AFSE 228 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSD 291 + + P+++ + T + +G+ ++ Sbjct: 229 VKDTEKPVVVHIATQKGKGYKFAE 252 >gi|301299820|ref|ZP_07206056.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852573|gb|EFK80221.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 586 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 66/167 (39%), Gaps = 29/167 (17%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH ++L TG+A A + + V GDG+ + G E N AA Sbjct: 111 SEHDYFKVGH--TSTSIALATGMAKARDMKNENGNIVAVIGDGSMSGGLALEGLNNAAKL 168 Query: 208 NLNVIYVIENNQ----------YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N+I + +NQ Y M + + Q+ S N+ + G+D R V Sbjct: 169 KSNLIIIFNDNQMSIDDVNGGMYKMFAELRETNGQS-------SNNL--FKAMGLDYRYV 219 Query: 258 K-----ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 TM + + PI++ + T + G+ PA R RE Sbjct: 220 DNGNDLETMISILEEVKDIDHPIVVHINTLKGEGYQ---PAIERKRE 263 >gi|256619604|emb|CAZ66648.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 precursor [Solanum lycopersicum] Length = 719 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 31/64 (48%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G G+A + + + GDGA GQ YE+ N A + ++I ++ Sbjct: 184 GTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 243 Query: 216 ENNQ 219 +N+ Sbjct: 244 NDNR 247 >gi|261822343|ref|YP_003260449.1| 2-oxoglutarate dehydrogenase E1 component [Pectobacterium wasabiae WPP163] gi|261606356|gb|ACX88842.1| 2-oxoglutarate dehydrogenase, E1 subunit [Pectobacterium wasabiae WPP163] Length = 935 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 5/156 (3%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A + QG V E N++ + V + ++ NN+ TS T + + Sbjct: 352 LPITIHGDAAVSGQGVVQELLNMSTVRGYEVGGTLRIVINNRIGFTTSNPLDIRSTEYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 G P V+ D AV A+ + A K + I+++ YR GH+ +D + Sbjct: 412 DIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNAFKRDVFIDLICYRRHGHNEADEPSAT 471 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +++ + P + RL NK + D E+ Sbjct: 472 QPMMYQKIKKHPTPRKVYADRLEQNKTITLEDATEM 507 >gi|255551595|ref|XP_002516843.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis] gi|223543931|gb|EEF45457.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis] Length = 720 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 30/64 (46%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G G+A + V GDGA GQ YE+ N A + ++I ++ Sbjct: 184 GTGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 243 Query: 216 ENNQ 219 +N+ Sbjct: 244 NDNK 247 >gi|43019|emb|CAA25280.1| unnamed protein product [Escherichia coli] gi|146201|gb|AAA23897.1| 2-oxoglutarate dehydrogenase [Escherichia coli K-12] Length = 933 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+ N++ V + ++ NNQ TS + T + + Sbjct: 350 LPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCT 409 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 G P V+ D AV A+ + K + I++++YR GH+ +D Sbjct: 410 DIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVSYRRHGHNEAD 464 >gi|319403927|emb|CBI77515.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella rochalimae ATCC BAA-1498] Length = 640 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 15/114 (13%) Query: 129 LTGR---------QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR +GG+S G + S + F GH +S G G+A + Sbjct: 86 LTGRRDRIRTLRQEGGLS---GFTKRSESVYDPFGAGHS--STSISAGLGMAMVSALEAE 140 Query: 180 DKICVV-CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 +K ++ GDGA + G YE+ N A + +I ++ +N ++ + SA Sbjct: 141 EKRNIISVIGDGAISAGMAYEAMNNAGALDARLIVILNDNDMSIASPTGAMSAH 194 >gi|254469091|ref|ZP_05082497.1| 1-deoxy-D-xylulose-5-phosphate synthase [beta proteobacterium KB13] gi|207087901|gb|EDZ65184.1| 1-deoxy-D-xylulose-5-phosphate synthase [beta proteobacterium KB13] Length = 608 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 17/127 (13%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGF---------YGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR K K ++ F +GF + G G +S+ GI+ A +S Sbjct: 86 LTGR-----KNKLHTLRQFKGISGFPKRDESVHDHFGTGHSSTSISVALGISEAMLKNKS 140 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 + + GDGA G +E+ N A N++ ++ +N ++ +V A N+ R Sbjct: 141 NNKSIAIIGDGAMTAGMAFEALNNAGESKSNILVILNDNDMSISKNV---GALNNYLARL 197 Query: 240 VSFNIPG 246 +S I G Sbjct: 198 LSGKIYG 204 >gi|166711613|ref|ZP_02242820.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 638 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ I K K G + Y G+ +S G+A A + D+ V Sbjct: 87 LTGRRDQIHTVKQKDGVAPFPKREESVYDTFGVGHSSTSISAALGMAIAAQRNGDDRKVV 146 Query: 185 VCFGDGAANQGQVYESFNIAALWN--LNVIYVIENNQYAMGTSV 226 GDGA G VYE+ N A + N++ ++ +N+ ++ +V Sbjct: 147 AVIGDGAMTAGMVYEALNHAGGMDPEPNLLVILNDNRMSISEAV 190 >gi|5059160|gb|AAD38941.1|AF143812_1 1-D-deoxyxylulose 5-phosphate synthase [Solanum lycopersicum] Length = 719 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 31/64 (48%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G G+A + + + GDGA GQ YE+ N A + ++I ++ Sbjct: 184 GTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 243 Query: 216 ENNQ 219 +N+ Sbjct: 244 NDNR 247 >gi|15602397|ref|NP_245469.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pasteurella multocida subsp. multocida str. Pm70] gi|13431439|sp|P57848|DXS_PASMU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|12720795|gb|AAK02616.1| Dxs [Pasteurella multocida subsp. multocida str. Pm70] Length = 614 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G GIA A + + + V GDGA G +E+ N A + +++ ++ +N+ ++ Sbjct: 123 ISAGLGIAVAAQRENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSIS 182 Query: 224 TSV 226 +V Sbjct: 183 ENV 185 >gi|253990913|ref|YP_003042269.1| 1-deoxy-D-xylulose-5-phosphate synthase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782363|emb|CAQ85527.1| 1-deoxy-D-xylulose-5-phosphate synthase [Photorhabdus asymbiotica] Length = 621 Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust. Identities = 52/222 (23%), Positives = 92/222 (41%), Gaps = 66/222 (29%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFA----NKYR 177 LTGR+ I + K G +H F S + GH +S G G+A A NK R Sbjct: 88 LTGRRDRIDTIRQKNG-LHPFPWRDESEYDTLCVGHS--STSISAGLGMAIAAQRENKGR 144 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS---------- 227 R+ +CV+ GDGA G +E+ N A + +++ ++ +N+ ++ +V Sbjct: 145 RT--VCVI--GDGAITAGMAFEAMNHAGDIDPDILVILNDNEMSISENVGALNNHLAQLL 200 Query: 228 --------RASAQTNFSK--------RGVSFNIPGM----------------QVDGMDIR 255 R + FS + +I GM +DG D+ Sbjct: 201 SGKLYTTLREGGKKVFSNLPPIKELLKKTEEHIKGMVIPGTLFEELGFNYIGPIDGHDV- 259 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 T+ + + R KGP ++ ++T + RG++ + DP ++ Sbjct: 260 ---LTLTQTLKNMRELKGPQLLHIMTKKGRGYAPAEKDPISW 298 >gi|188991128|ref|YP_001903138.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas campestris pv. campestris str. B100] gi|167732888|emb|CAP51082.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas campestris pv. campestris] Length = 693 Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ I K K G + Y G+ +S G+A A + D+ V Sbjct: 142 LTGRRDQIHTVKQKDGVAPFPKREESVYDTFGVGHSSTSISAALGMAIAAQRNGDDRKVV 201 Query: 185 VCFGDGAANQGQVYESFNIAALWN--LNVIYVIENNQYAMGTSV 226 GDGA G VYE+ N A + N++ ++ +N+ ++ +V Sbjct: 202 AVIGDGAMTAGMVYEALNHAGGMDPEPNLLVILNDNRMSISEAV 245 >gi|122891454|emb|CAM13054.1| transketolase-like 1 [Homo sapiens] Length = 174 Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 2/99 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C DG +++G V+E+ A+ ++L N++ + Sbjct: 76 GWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIF 135 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + N+ ++ + +R +F VDG D+ Sbjct: 136 DVNRLGHSGALPAEHCINIYQRRCEAFGWNTYVVDGRDV 174 >gi|284007862|emb|CBA73769.1| 2-oxoglutarate dehydrogenase E1 component [Arsenophonus nasoniae] Length = 937 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A QG V E N++ V + V+ NNQ TS + + T + Sbjct: 348 LPITIHGDAAVTGQGVVQEMLNMSQARGFEVGGTVRVVVNNQIGFTTSNPKDARSTQYCT 407 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + P V+ D AV A+ + K ++I+++ YR GH+ +D Sbjct: 408 DIMKMVQAPIFHVNADDPEAVAFVTRLALDFRNKFKRDVVIDLVCYRRHGHNEAD 462 >gi|283458268|ref|YP_003362887.1| deoxyxylulose-5-phosphate synthase [Rothia mucilaginosa DY-18] gi|283134302|dbj|BAI65067.1| deoxyxylulose-5-phosphate synthase [Rothia mucilaginosa DY-18] Length = 690 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%) Query: 169 GIAFANKYR-RSDKICVVCFGDGAANQGQVYESFN-IAALWNLNVIYVIENNQYAMGTSV 226 GI+ A+K D+ VV GDGA G +E+ N IAA V+ V+ +N + ++ Sbjct: 156 GISRAHKLNGEDDRYTVVLIGDGALTGGMAWEAVNNIAADRTRKVVIVVNDNGRSYAPTI 215 Query: 227 SRASAQTNFSKRGVSFNIPGMQVD 250 + Q + K GV ++ +++D Sbjct: 216 GGFANQLSELKHGVQQHVDRVRLD 239 >gi|257866338|ref|ZP_05645991.1| transketolase [Enterococcus casseliflavus EC30] gi|257800296|gb|EEV29324.1| transketolase [Enterococcus casseliflavus EC30] Length = 271 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 5/135 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K GDG +G V+E AA + L N+ +I+ Sbjct: 107 GSLGHGLPVAVGIALAGKLDHRTYQTYTLLGDGELAEGSVWEGAMAAANYQLDNLTAIID 166 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 N + + A ++ +F VDG D+ A+ A ++K P + Sbjct: 167 RNGLQITGASEDVMAVEPLDEKWRAFGWDVHIVDGNDMAALVAALEKP----HQPNQPKL 222 Query: 277 IEMLTYRYRGHSMSD 291 I T + +G+S ++ Sbjct: 223 IIAKTIKGKGYSAAE 237 >gi|168333590|ref|ZP_02691855.1| deoxyxylulose-5-phosphate synthase [Epulopiscium sp. 'N.t. morphotype B'] Length = 617 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 6/98 (6%) Query: 130 TGRQ-GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFG 188 T RQ GGIS G S + F GH +S GIA A + + G Sbjct: 91 TLRQFGGIS---GFIKRQESPHDIFETGHS--STSISAALGIATARDLQNEKFNVIAVIG 145 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 DGA G +E+ N A N N+I V+ +N+ ++ +V Sbjct: 146 DGALTGGMAFEALNNAGRSNNNLIVVLNDNEMSISKNV 183 >gi|319788993|ref|YP_004150626.1| deoxyxylulose-5-phosphate synthase [Thermovibrio ammonificans HB-1] gi|317113495|gb|ADU95985.1| deoxyxylulose-5-phosphate synthase [Thermovibrio ammonificans HB-1] Length = 617 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 70/194 (36%), Gaps = 54/194 (27%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S GI + + + + GDGA G+ YE N A Sbjct: 105 SPYDAFGTGHS--STSISAALGIKVGKRLKGEEGHVIAVIGDGALTAGEAYEGLNNAGQL 162 Query: 208 NLNVIYVIENNQYAM----------------GTSVSRASAQTNFSKRGV----------- 240 ++I ++ +N+ ++ G S+ RA + + + Sbjct: 163 KEDLIVILNDNEMSISKNIGAISNYLTKLTTGESLRRAKERLEEVTKKIFGDTFYKGLKR 222 Query: 241 -------SFNIPGM-----------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 PGM +DG DI + T+ + V+ R GP ++ +LT Sbjct: 223 VEDLIVKGLFPPGMLFEELGFRYVGPIDGHDIETLVTTL-RNVSKMR---GPTLVHVLTK 278 Query: 283 RYRGHSMSDPANYR 296 + +GH PA R Sbjct: 279 KGKGHK---PAEER 289 >gi|56477948|ref|YP_159537.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aromatoleum aromaticum EbN1] gi|81598684|sp|Q5P228|DXS_AZOSE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|56313991|emb|CAI08636.1| 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) (DXP synthase) (DXPS) [Aromatoleum aromaticum EbN1] Length = 621 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 9/105 (8%) Query: 129 LTGRQGGISKGKG-GSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ +S+ + G + F S+ + F H +LG +A N+ + I Sbjct: 84 LTGRREAMSRLRQFGGISGFPRRSESSYDTFGTAHSSTSISAALGMAVAARNRGEQRRSI 143 Query: 183 CVVCFGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSV 226 V+ GDGA + G +E+ N A + ++N++ ++ +N+ ++ V Sbjct: 144 AVI--GDGAMSAGMAFEALNNAGDMRDINLLVILNDNEMSISPPV 186 >gi|256545420|ref|ZP_05472782.1| transketolase [Anaerococcus vaginalis ATCC 51170] gi|256398816|gb|EEU12431.1| transketolase [Anaerococcus vaginalis ATCC 51170] Length = 662 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 18/137 (13%) Query: 158 GIVGAQVSLGTGIAFANKYRRS----------DKICVVCFGDGAANQGQVYESFNIAALW 207 G +G + G+A A K+ ++ D GDG +G YE+ ++A Sbjct: 116 GPLGQGIGQAVGLAIAEKHMQALYNKDDFKIIDHYTFALCGDGDLMEGVSYEAMSLAGHL 175 Query: 208 NLNVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAV 265 NLN + V+ ++N + S+S +S N KR + N ++V DG ++ + KA+ Sbjct: 176 NLNKLIVLYDSNDICLDGSLS-SSFSENVEKRVSAQNWNYLKVEDGNNLEEIY----KAI 230 Query: 266 AYCRAHK-GPIIIEMLT 281 + +K GP +IE+ T Sbjct: 231 KKAKENKNGPTLIEVKT 247 >gi|78184642|ref|YP_377077.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. CC9902] gi|118595626|sp|Q3AXZ4|DXS_SYNS9 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|78168936|gb|ABB26033.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. CC9902] Length = 643 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 1/83 (1%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYV 214 G G +S G+A R + CV GDGA G E+ N A L N ++ V Sbjct: 111 GAGHASTSISAALGMALGRDNRGENFKCVAVIGDGALTGGMALEAINHAGHLPNTPLLVV 170 Query: 215 IENNQYAMGTSVSRASAQTNFSK 237 + +N ++ V S+ N ++ Sbjct: 171 LNDNDMSISPPVGALSSVLNRAR 193 >gi|30315812|sp|O78328|DXS_CAPAN RecName: Full=Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic; Short=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; AltName: Full=CapTKT2; Flags: Precursor gi|3559816|emb|CAA75778.1| transketolase 2 [Capsicum annuum] Length = 719 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 31/64 (48%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G G+A + + + GDGA GQ YE+ N A + ++I ++ Sbjct: 184 GTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 243 Query: 216 ENNQ 219 +N+ Sbjct: 244 NDNR 247 >gi|225573688|ref|ZP_03782443.1| hypothetical protein RUMHYD_01884 [Blautia hydrogenotrophica DSM 10507] gi|225038981|gb|EEG49227.1| hypothetical protein RUMHYD_01884 [Blautia hydrogenotrophica DSM 10507] Length = 618 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 50/217 (23%), Positives = 81/217 (37%), Gaps = 52/217 (23%) Query: 129 LTGRQGGISKGKG-GSMHMFSTKN-----GFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ S + G + F +N F GH +S G G A R + Sbjct: 80 LTGRKNLFSSLRQEGGLSGFPKRNESACDSFDTGHS--SNSLSAGLGYVRARDLRGENYR 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM-----GTSVSRASAQTNFSK 237 V GDGA G YE+ N AA N + V+ +N ++ G S ++ +T S Sbjct: 138 VVSVIGDGALTGGMAYEALNNAAELKTNFMIVLNDNTMSISKNVGGISSYLSAVRTAQSY 197 Query: 238 RGVSFN------------------------------IPGMQVDGMDIRAVKAT------- 260 G+ + IPGM + M I + Sbjct: 198 TGLKLSVTNSLKKIPRVGEQLVDAVRRTKTSIKQLFIPGMWFEDMGITYLGPADGHDMLQ 257 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGH--SMSDPANY 295 M K + +GP+++ ++T + RG+ ++ PA + Sbjct: 258 MMKLFNEAKRVQGPVLVHVVTEKGRGYEPAVRHPARF 294 >gi|114331489|ref|YP_747711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas eutropha C91] gi|122313705|sp|Q0AFY6|DXS_NITEC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|114308503|gb|ABI59746.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas eutropha C91] Length = 614 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 4/102 (3%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGIV--GAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ G++ + +GG Y G +S G+A A + + + + Sbjct: 82 LTGRRTGMAHLRMQGGIAGFPRRDESEYDAFGTAHSSTSISAALGMAVAARINKIKQHAI 141 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GDGA + G +E+ N A + + +++ ++ +N ++ V Sbjct: 142 AIIGDGAMSAGMAFEALNNAGVMDADLLVILNDNDMSISPPV 183 >gi|300854302|ref|YP_003779286.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium ljungdahlii DSM 13528] gi|300434417|gb|ADK14184.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium ljungdahlii DSM 13528] Length = 624 Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust. Identities = 44/214 (20%), Positives = 79/214 (36%), Gaps = 56/214 (26%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GG+S G S + F GH +LG A K+ + Sbjct: 82 LTGRKDKFDTLRQFGGLS---GFPKRCESIYDFFETGHSSTSISAALGMARARDLKHEKY 138 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 + + V+ GDGA G E+ N +I ++ +NQ ++G +V S N + Sbjct: 139 NVVAVI--GDGALTGGMALEALNDVGYRKTKLIIILNDNQMSIGKNVGGVSKYLNKLRVD 196 Query: 240 VSFN-----------------------------------IPGMQVDGMDIRAVKAT---- 260 +N +PGM + M I+ + Sbjct: 197 PKYNKFKADVEAKLKKIPNIGKGMAKYLEKVKNGIKQMVVPGMFFEDMGIKYLGPIDGHN 256 Query: 261 ---MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + +A + +GP+II ++T + +G+ ++ Sbjct: 257 IKELTDVLASAKDIQGPVIIHIITKKGKGYEFAE 290 >gi|228471148|ref|ZP_04055967.1| 1-deoxy-D-xylulose-5-phosphate synthase [Porphyromonas uenonis 60-3] gi|228307088|gb|EEK16162.1| 1-deoxy-D-xylulose-5-phosphate synthase [Porphyromonas uenonis 60-3] Length = 633 Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust. Identities = 43/196 (21%), Positives = 85/196 (43%), Gaps = 17/196 (8%) Query: 35 DIPFLEGFEVSEFNKEQELSAY-RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 D P L + + ++ LS +L +RR+E L + V G +G + V Sbjct: 5 DYPILSHIDTPQQLRQLSLSQLPQLCQELRRYE-----LEVLSHVPGHLGSSLGAVELTV 59 Query: 94 GMK-MSLTEGDQMI--TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK 150 + + T D+++ ++ +GH + G + E + GG+S G + S Sbjct: 60 ALHYVCRTPYDRIVWDVGHQAYGHKILTG---RRDRFESLRQWGGLS---GFPLPSESEY 113 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 + F GH +S G+A A K ++ ++ V GDG+ G +E N + + + Sbjct: 114 DTFPAGHA--SNSISAALGMAIAAKLKQEERHVVAVIGDGSMTGGLAFEGLNNVSSYPND 171 Query: 211 VIYVIENNQYAMGTSV 226 ++ V+ +N ++ +V Sbjct: 172 LLIVVNDNNMSIDANV 187 >gi|118444227|ref|YP_877350.1| transketolase, N-terminal subunit [Clostridium novyi NT] gi|118134683|gb|ABK61727.1| transketolase, N-terminal subunit [Clostridium novyi NT] Length = 274 Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A A K + D GDG +GQV+E+ AA + L N+ ++ Sbjct: 117 GSLGQGISVAVGMAMAGKIDQKDFRVYSVLGDGELAEGQVWEAAMAAAHYKLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + + +F + ++G DI V KA+ + KG P Sbjct: 177 YNGLQIDGKTKDVMGSDPIDAKFEAFGWHVININGNDIEEVI----KAIEEAKNIKGKPT 232 Query: 276 IIEMLTYRYRGHSM 289 +I T + +G S Sbjct: 233 MIVAKTVKGKGVSF 246 >gi|104779860|ref|YP_606358.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas entomophila L48] gi|123381053|sp|Q1IFL1|DXS_PSEE4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|95108847|emb|CAK13543.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas entomophila L48] Length = 631 Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust. Identities = 39/200 (19%), Positives = 72/200 (36%), Gaps = 51/200 (25%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + + + + GDGA G +E+ N A + N++ ++ Sbjct: 126 GVGHSSTSISAALGMAIAARLQNDPRKSIAVIGDGALTAGMAFEALNHAQEVDANMLVIL 185 Query: 216 ENNQYAMGTSV------------SRASAQTNFSKRGVSFNIPGM---------------- 247 +N ++ +V SR A + V +PG Sbjct: 186 NDNDMSISRNVGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAWEIARRTEEYAKGMLV 245 Query: 248 --------------QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--D 291 +DG D+ + AT+ R KGP + ++T + +G + + D Sbjct: 246 PGTLFEELGWNYIGPIDGHDLPTLIATLRN----MRDLKGPQFLHVVTKKGKGFAPAEVD 301 Query: 292 PANYRTREEINEMRSNHDPI 311 P Y I ++ P+ Sbjct: 302 PIGYHA---ITKLEPADKPV 318 >gi|86358013|ref|YP_469905.1| transketolase N-terminal subunit protein [Rhizobium etli CFN 42] gi|86282115|gb|ABC91178.1| transketolase N-terminal subunit protein [Rhizobium etli CFN 42] Length = 237 Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust. Identities = 29/134 (21%), Positives = 61/134 (45%), Gaps = 9/134 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A A K + V GDG +G +E+ AA + L N+ +I+ Sbjct: 83 GPLGHGLPVAVGMAKAAKLSGAGYHTYVVTGDGEMQEGSNWEAIMAAAQFKLDNLTLIID 142 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N++ G +++ + + +F ++DG ++ + ++ R GP Sbjct: 143 HNRFQQGAALAETNDLAPLRPKLEAFGWEVTEIDGNNMGEIVPALE------RRGSGPHC 196 Query: 277 IEMLTYRYRGHSMS 290 I + + +GH +S Sbjct: 197 I--VAHTNKGHGIS 208 >gi|328544068|ref|YP_004304177.1| transketolase, N-subunit [polymorphum gilvum SL003B-26A1] gi|326413812|gb|ADZ70875.1| Transketolase, N-subunit [Polymorphum gilvum SL003B-26A1] Length = 265 Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 2/91 (2%) Query: 169 GIAFANKYRRSDKICV-VCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSV 226 G A + + R K V V DG +GQ++E+ AA L N++ +++ N + V Sbjct: 118 GFALSQRLRNEPKANVFVLVSDGELQEGQLWEAAMFAAHNRLDNIVVLLDANDSQVDGPV 177 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 S + + + SF VDG D AV Sbjct: 178 SSITTIEPIAAKWESFGWAAFDVDGHDAEAV 208 >gi|255530786|ref|YP_003091158.1| transketolase [Pedobacter heparinus DSM 2366] gi|255343770|gb|ACU03096.1| Transketolase domain protein [Pedobacter heparinus DSM 2366] Length = 281 Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 8/128 (6%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G A A K + I GDG +GQ +E+ A + N+I I+ Sbjct: 119 GSLGQGMSVAIGAAQAKKLNKDHSIIYSLHGDGELQEGQNWEAIMYAPFNKIDNLISTID 178 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--- 273 N + + + N + +F + DG D+ A+ KA+ Y ++ G Sbjct: 179 YNGQQIDGPTEKVLSLENLQAKFEAFGWHVINSDGNDMDAIV----KALHYAKSLTGKGK 234 Query: 274 PIIIEMLT 281 PI+ M T Sbjct: 235 PILNLMST 242 >gi|192359149|ref|YP_001983790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cellvibrio japonicus Ueda107] gi|229813265|sp|B3PF22|DXS_CELJU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|190685314|gb|ACE82992.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cellvibrio japonicus Ueda107] Length = 636 Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust. Identities = 49/216 (22%), Positives = 85/216 (39%), Gaps = 37/216 (17%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 + R AT +D +D P +E E +L +R F LY +G GG Sbjct: 5 IPTNRPATPLLDSIDSP-------AELRALSEKQLPQLADELRAF-----LLYTVGQTGG 52 Query: 81 FCHLCIGQEAVIVGMKMSL-----TEGDQMI--TAYREHGHILACGVDASKIMAELTGRQ 133 +G +V + ++L T D+++ ++ + H KI+ R Sbjct: 53 HFGAGLG----VVELTIALHYVYDTPEDRLVWDVGHQTYPH---------KILTSRRERM 99 Query: 134 GGISKGKGGS---MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDG 190 I +G G S S + F GH +S G+A K +++ GDG Sbjct: 100 HSIRQGGGLSGFPKREESPYDTFGVGHS--STSISAAQGMAIGAKMAGTERKVAAIIGDG 157 Query: 191 AANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 A G +E+ N AA +++ V+ +N ++ +V Sbjct: 158 AMTAGMAFEALNHAAHTETDMLVVLNDNNMSISPNV 193 >gi|74316897|ref|YP_314637.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiobacillus denitrificans ATCC 25259] gi|118595629|sp|Q3SKF1|DXS_THIDA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|74056392|gb|AAZ96832.1| deoxyxylulose-5-phosphate synthase [Thiobacillus denitrificans ATCC 25259] Length = 618 Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 8/110 (7%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 ++GGI+ G S + F GH +LG AF SD+ V GDGA Sbjct: 95 QRGGIA---GFPRRAESEFDAFGTGHSSTSISAALGMAEAF--HQLGSDQRAVAVIGDGA 149 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 G +E+ N A L ++ V+ +N ++ +V A N+ R +S Sbjct: 150 MTAGMAFEALNNAGATELPLLVVLNDNDMSISPNV---GALNNYLARLMS 196 >gi|224543247|ref|ZP_03683786.1| hypothetical protein CATMIT_02447 [Catenibacterium mitsuokai DSM 15897] gi|224523780|gb|EEF92885.1| hypothetical protein CATMIT_02447 [Catenibacterium mitsuokai DSM 15897] Length = 640 Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 15/127 (11%) Query: 151 NGFYGGHGIVGAQVSLGTGIA-----FANKYRRSDKICV------VCFGDGAANQGQVYE 199 +G G +G V TG+A A KY + D V +C GDG +G YE Sbjct: 90 DGVDASSGPLGQGVPTATGMAIAEKFLAEKYNKEDCSIVDHYTYALC-GDGDMQEGVTYE 148 Query: 200 SFNIAALWNLNVIYVI-ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAV 257 + ++A +L + VI + N+ + +S + ++ N KR + N ++V DG DI+A+ Sbjct: 149 ASSLAGHLSLGKLIVIYDANEVTLDGPLSYSFSE-NVKKRYEAMNWQVIEVADGNDIQAI 207 Query: 258 KATMDKA 264 + +A Sbjct: 208 NRALKRA 214 >gi|189459893|ref|ZP_03008678.1| hypothetical protein BACCOP_00526 [Bacteroides coprocola DSM 17136] gi|189433410|gb|EDV02395.1| hypothetical protein BACCOP_00526 [Bacteroides coprocola DSM 17136] Length = 585 Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust. Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 28/178 (15%) Query: 129 LTGRQGGI------SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+G K G + S + F GH VSL G+ A + ++ Sbjct: 80 LTGRKGAFLNAADYDKVSGYTNPQESEHDFFTIGH--TSTSVSLACGLVKARDLKGGNEN 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS------------VSRAS 230 + GDG+ + G+ YE + A N+I V+ +N+ ++ + + Sbjct: 138 IIAVIGDGSLSGGEAYEGLSNAGENGTNMIIVVNDNEMSIAENHGGLYQNLRLLRETEGK 197 Query: 231 AQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 A NF + S + + V DG DI A++ A + + P+++ + T + +G+ Sbjct: 198 ASCNFFR---SLGLDYLYVKDGNDI----ASLITAFSSVKDTPRPVVVHIHTLKGKGY 248 >gi|325915158|ref|ZP_08177484.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas vesicatoria ATCC 35937] gi|325538680|gb|EGD10350.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas vesicatoria ATCC 35937] Length = 639 Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ I K K G + Y G+ +S G+A A + D+ V Sbjct: 88 LTGRRDQIHTVKQKDGVAPFPKREESVYDTFGVGHSSTSISAALGMAIAAQRNGDDRKVV 147 Query: 185 VCFGDGAANQGQVYESFNIAALWN--LNVIYVIENNQYAMGTSV 226 GDGA G VYE+ N A + N++ ++ +N+ ++ +V Sbjct: 148 AVIGDGAMTAGMVYEALNHAGGMDPEPNLLVILNDNRMSISEAV 191 >gi|240949320|ref|ZP_04753663.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus minor NM305] gi|240296271|gb|EER46920.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus minor NM305] Length = 617 Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G GIA A + + + V GDGA G +E+ N A + +++ ++ +N+ ++ Sbjct: 124 ISAGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSIS 183 Query: 224 TSV 226 +V Sbjct: 184 ENV 186 >gi|117924355|ref|YP_864972.1| 1-deoxy-D-xylulose-5-phosphate synthase [Magnetococcus sp. MC-1] gi|226740156|sp|A0L6H3|DXS_MAGSM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|117608111|gb|ABK43566.1| 1-deoxy-D-xylulose-5-phosphate synthase [Magnetococcus sp. MC-1] Length = 622 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 2/90 (2%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN--LNVIY 213 G G +S G+A A K + V GDGA G +E+ N A N L+++ Sbjct: 113 GTGHSSTSISAAMGMARAAKANGIQRKAVAVIGDGAMGAGMAFEALNHAGHDNHDLDLVV 172 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 V+ +N+ ++ +V S+ N G ++N Sbjct: 173 VLNDNEMSISPNVGALSSYLNRMLSGGAYN 202 >gi|253995977|ref|YP_003048041.1| deoxyxylulose-5-phosphate synthase [Methylotenera mobilis JLW8] gi|253982656|gb|ACT47514.1| deoxyxylulose-5-phosphate synthase [Methylotenera mobilis JLW8] Length = 617 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 35/71 (49%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G+A A + S++ V GDGA G +E+ N A + N++ V+ Sbjct: 113 GTGHSSTSISAALGMAVAAQKAGSERRSVAIIGDGAMTAGMAFEALNNAGNMDANLLVVL 172 Query: 216 ENNQYAMGTSV 226 +N ++ +V Sbjct: 173 NDNDMSISNNV 183 >gi|227327510|ref|ZP_03831534.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 621 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNG-----FYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ IS + KGG +H F ++ GH LG +A + + Sbjct: 88 LTGRRERISTIRQKGG-LHPFPWRDESEYDVLSVGHSSTSISAGLGMAVAAEREGKGRRT 146 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 +CV+ GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 147 VCVI--GDGAITAGMAFEAMNHAGDIKSDLLVVLNDNEMSISENV 189 >gi|217418269|gb|ACK44273.1| transketolase-like 1 (predicted) [Oryctolagus cuniculus] Length = 125 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 2/87 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G G + G+A+ +Y V C GDG ++G V+E+ A+ +NL N++ + Sbjct: 38 GWFGQGLGAACGMAYTGRYFDKASYRVFCLLGDGETSEGSVWEAMTFASYYNLDNLVVIF 97 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSF 242 + N+ G ++ + KR +F Sbjct: 98 DVNRLGQGGTLPVEDCIEIYQKRCEAF 124 >gi|15668862|ref|NP_247665.1| transketolase' [Methanocaldococcus jannaschii DSM 2661] gi|2833528|sp|Q58094|TKTN_METJA RecName: Full=Putative transketolase N-terminal section; Short=TK gi|1591396|gb|AAB98676.1| transketolase' [Methanocaldococcus jannaschii DSM 2661] Length = 274 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S G+A + + + V GDG +G V+E+ AA + L N+I I+ Sbjct: 118 GSLGQGFSAAVGMALGCRLDKLNNYVYVLLGDGECQEGIVWEAAMAAAHYKLDNLIAFID 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N+ + + + + +F ++DG + + T++KA Sbjct: 178 RNKLQIDGCTEDVMSLGDIKAKFEAFGWDVFEIDGHNFEEIINTVEKA 225 >gi|119774564|ref|YP_927304.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella amazonensis SB2B] gi|119767064|gb|ABL99634.1| 2-oxoglutarate dehydrogenase E1 component [Shewanella amazonensis SB2B] Length = 940 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 5/113 (4%) Query: 184 VVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKR 238 + GD A A QG V E+FN++ V I ++ NNQ TS T + + Sbjct: 359 ITIHGDSAIAGQGIVQETFNMSQTRGFRVGGSIRIVVNNQVGFTTSNHHDVRSTEYCTDI 418 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 P V+ D AV AV Y A K ++I+++ YR GH+ +D Sbjct: 419 AKMVQAPIFHVNADDPEAVAFVAQVAVDYRNAFKRDVVIDLVCYRRHGHNEAD 471 >gi|325286554|ref|YP_004262344.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cellulophaga lytica DSM 7489] gi|324322008|gb|ADY29473.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cellulophaga lytica DSM 7489] Length = 589 Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust. Identities = 30/142 (21%), Positives = 65/142 (45%), Gaps = 16/142 (11%) Query: 156 GHGIVGAQVSLGTGIAFANKYR-RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G G +S G+A A+K + + K + GD + G +E N A + + NV+ + Sbjct: 112 GTGHSSTSISAILGMAIASKLKGETLKQHIAVIGDASIASGMAFEGLNHAGVTDANVLII 171 Query: 215 IENNQYAMG----------TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 + +N + T+V + SA+ + ++FN G +DG ++ + +++ Sbjct: 172 LNDNAIGIDPSVGALKQYLTNVKKGSAKQDNIFEALNFNYSG-PIDGHNLPLLIEELNR- 229 Query: 265 VAYCRAHKGPIIIEMLTYRYRG 286 + +GP + ++T + +G Sbjct: 230 ---LKTVRGPKFLHVITTKGKG 248 >gi|262377336|ref|ZP_06070560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter lwoffii SH145] gi|262307789|gb|EEY88928.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acinetobacter lwoffii SH145] Length = 636 Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 34/71 (47%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G G+A A +Y+ V GDGA G +E+ N A + +++ V+ Sbjct: 124 GVGHSSTAISAGLGMALARRYQNKPCEVVSIIGDGAMTAGMAFEALNDAVAHSADLMVVL 183 Query: 216 ENNQYAMGTSV 226 +N ++ S Sbjct: 184 NDNDMSISCST 194 >gi|254974742|ref|ZP_05271214.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium difficile QCD-66c26] gi|255092131|ref|ZP_05321609.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium difficile CIP 107932] gi|255313868|ref|ZP_05355451.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium difficile QCD-76w55] gi|255516549|ref|ZP_05384225.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium difficile QCD-97b34] gi|255649649|ref|ZP_05396551.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium difficile QCD-37x79] gi|260682813|ref|YP_003214098.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium difficile CD196] gi|260686411|ref|YP_003217544.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium difficile R20291] gi|260208976|emb|CBA62029.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium difficile CD196] gi|260212427|emb|CBE03296.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium difficile R20291] Length = 621 Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust. Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 2/79 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S+ TGIA A ++ + + GDG+ G E+ N Sbjct: 107 SPHDIFDTGHS--STSISIATGIACARDIKKENYSVISVIGDGSITGGMALEALNQLGYI 164 Query: 208 NLNVIYVIENNQYAMGTSV 226 + N+I ++ +N+ ++ +V Sbjct: 165 DTNMIVILNDNEMSIDKNV 183 >gi|217076186|ref|YP_002333902.1| transketolase [Thermosipho africanus TCF52B] gi|217036039|gb|ACJ74561.1| transketolase [Thermosipho africanus TCF52B] Length = 620 Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 31/58 (53%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G +G +S G G+A A K + D V DG + +GQV E+ A +NL+ + VI Sbjct: 113 GNLGQGLSAGVGMALAGKLKNKDYHVYVVMSDGESAKGQVAEARRTANKYNLDNLTVI 170 >gi|21113591|gb|AAM41711.1| deoxyxylulose-5-phosphate synthase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573334|gb|AAY48744.1| deoxyxylulose-5-phosphate synthase [Xanthomonas campestris pv. campestris str. 8004] Length = 693 Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ I K K G + Y G+ +S G+A A + D+ V Sbjct: 142 LTGRRDQIHTVKQKDGVAPFPKREESVYDTFGVGHSSTSISAALGMAIAAQRNGDDRKVV 201 Query: 185 VCFGDGAANQGQVYESFNIAALWN--LNVIYVIENNQYAMGTSV 226 GDGA G VYE+ N A + N++ ++ +N+ ++ +V Sbjct: 202 AVIGDGAMTAGMVYEALNHAGGMDPEPNLLVILNDNRMSISEAV 245 >gi|45361299|ref|NP_989227.1| transketolase-like 2 [Xenopus (Silurana) tropicalis] gi|38969927|gb|AAH63226.1| transketolase [Xenopus (Silurana) tropicalis] Length = 625 Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+ A+ ++L N++ + Sbjct: 123 GSLGQGLGASCGMAYTGKYFDKASYRVYCLLGDGESSEGAVWEAMAFASHYHLDNLVAIF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + N+ + + KR +F VDG D+ Sbjct: 183 DVNRLGQSEAAPLQHQTDIYMKRCEAFGWNTYVVDGHDV 221 >gi|77747890|ref|NP_637787.2| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|77761160|ref|YP_242764.2| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas campestris pv. campestris str. 8004] gi|24211659|sp|Q8P815|DXS_XANCP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|118595632|sp|Q4UW29|DXS_XANC8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS Length = 638 Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ I K K G + Y G+ +S G+A A + D+ V Sbjct: 87 LTGRRDQIHTVKQKDGVAPFPKREESVYDTFGVGHSSTSISAALGMAIAAQRNGDDRKVV 146 Query: 185 VCFGDGAANQGQVYESFNIAALWN--LNVIYVIENNQYAMGTSV 226 GDGA G VYE+ N A + N++ ++ +N+ ++ +V Sbjct: 147 AVIGDGAMTAGMVYEALNHAGGMDPEPNLLVILNDNRMSISEAV 190 >gi|260436475|ref|ZP_05790445.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. WH 8109] gi|260414349|gb|EEX07645.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. WH 8109] Length = 643 Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYV 214 G G +S G+A A R CV GDGA G E+ N A L N ++ V Sbjct: 111 GAGHASTSISAALGMAMARDNRGESFKCVAVIGDGALTGGMALEAINHAGHLPNTPLLVV 170 Query: 215 IENNQYAMGTSVSRASAQTNFSK 237 + +N ++ V S N ++ Sbjct: 171 LNDNDMSISPPVGALSNVLNRAR 193 >gi|255100222|ref|ZP_05329199.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium difficile QCD-63q42] Length = 621 Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust. Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 2/79 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S+ TGIA A ++ + + GDG+ G E+ N Sbjct: 107 SPHDIFDTGHS--STSISIATGIACARDIKKENYSVISVIGDGSITGGMALEALNQLGYI 164 Query: 208 NLNVIYVIENNQYAMGTSV 226 + N+I ++ +N+ ++ +V Sbjct: 165 DTNMIVILNDNEMSIDKNV 183 >gi|84623557|ref|YP_450929.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|122879153|ref|YP_200656.6| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas oryzae pv. oryzae KACC10331] gi|188577122|ref|YP_001914051.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas oryzae pv. oryzae PXO99A] gi|118595633|sp|Q2P472|DXS_XANOM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|118595634|sp|Q5H1A0|DXS_XANOR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|229836093|sp|B2SQV8|DXS_XANOP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|84367497|dbj|BAE68655.1| deoxyxylulose-5-phosphate synthase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521574|gb|ACD59519.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 638 Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 6/104 (5%) Query: 129 LTGRQGGIS--KGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ I K K G + Y G+ +S G+A A + D+ V Sbjct: 87 LTGRRDQIHTVKQKDGVAPFPKREESVYDTFGVGHSSTSISAALGMAIAAQRNGDDRKVV 146 Query: 185 VCFGDGAANQGQVYESFNIAALWN--LNVIYVIENNQYAMGTSV 226 GDGA G VYE+ N A + N++ ++ +N+ ++ +V Sbjct: 147 AVIGDGAMTAGMVYEALNHAGGMDPEPNLLVILNDNRMSISEAV 190 >gi|23098544|ref|NP_692010.1| alpha-ketoglutarate decarboxylase [Oceanobacillus iheyensis HTE831] gi|81741118|sp|Q8CUL8|ODO1_OCEIH RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName: Full=Alpha-ketoglutarate dehydrogenase gi|22776770|dbj|BAC13045.1| oxoglutarate dehydrogenase E1 subunit (alpha-ketoglutarte dehydrogenase) [Oceanobacillus iheyensis HTE831] Length = 953 Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust. Identities = 36/167 (21%), Positives = 74/167 (44%), Gaps = 8/167 (4%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + V+ GD A +G V E+ N++ L + +++I NN T + S Sbjct: 356 VSVLIHGDAAFIGEGVVAETLNLSGLPGYSTGGTLHIIANNLLGYTTDREDGRSTRYASD 415 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYR 296 F IP ++V+ D + + + A Y + + +I+++ YR GH+ M +P Sbjct: 416 LAKGFEIPVIRVNADDPISCISAIKIAYEYRQKFQKDFLIDLVGYRRYGHNEMDEPRT-- 473 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNK-WASEGDLKEIEMNVRKIINN 342 T+ + + +H + + + + K EG +E++ V K + + Sbjct: 474 TQPSLYQQIDDHPSVASLFGKGMEEKGILQEGGFEEVKSAVEKKLTD 520 >gi|325997239|gb|ADZ49447.1| Transketolase [Helicobacter pylori 2017] Length = 641 Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 6/100 (6%) Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSK 237 S K+ +C GDG +G YES ++A L N+I + ++NQ ++ +++ S Sbjct: 149 SHKVYCLC-GDGDLQEGISYESASLAGHLRLDNLIVIYDSNQISIEGAIN-ISFSEQVKT 206 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 R ++ N ++ DG D +A+ +++A ++HK ++I Sbjct: 207 RFLAQNWEVLECDGHDYQAIHNALEEAK---KSHKPTLLI 243 >gi|188527159|ref|YP_001909846.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori Shi470] gi|188143399|gb|ACD47816.1| 1-deoxy-D-xylulose-5-phosphate synthase [Helicobacter pylori Shi470] Length = 616 Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust. Identities = 33/163 (20%), Positives = 69/163 (42%), Gaps = 15/163 (9%) Query: 107 TAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T+++ + H L G ++ + + G G + S + F GH VS Sbjct: 66 TSHQAYAHKLLTGRFESFSTLRQFKGLSGFTKPSE-------SAYDYFIAGHS--STSVS 116 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+A A +++ + + GDG+ + G YE+ N +I ++ +N+ ++ T Sbjct: 117 IGVGVAKAFCLKQALGMPIALLGDGSISAGIFYEALNELGDRKYPMIMILNDNEMSISTP 176 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 + S + +G P Q ++ + T+ ++V Y Sbjct: 177 IGALSKALSQLMKG-----PFYQSFRSKVKKILNTLPESVNYL 214 >gi|325126279|gb|ADY85609.1| 1-deoxyxylulose-5-phosphate synthase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 122 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 32/64 (50%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 G +SL G+A A + + + G+G+ G YE N AAL N++ VI + Sbjct: 57 GHTSTSISLAAGMAKARELLGGSERIMAVIGNGSLTGGMAYEGLNNAALEKGNLVIVIND 116 Query: 218 NQYA 221 NQ++ Sbjct: 117 NQWS 120 >gi|255306111|ref|ZP_05350283.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium difficile ATCC 43255] Length = 621 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 2/79 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S+ TGIA A ++ + + GDG+ G E+ N Sbjct: 107 SPHDIFDTGHS--STSISIATGIACARDIKKENYSVISVIGDGSITGGMALEALNQLGYI 164 Query: 208 NLNVIYVIENNQYAMGTSV 226 + N+I ++ +N+ ++ +V Sbjct: 165 DTNMIVILNDNEMSIDKNV 183 >gi|110800728|ref|YP_694752.1| putative transketolase, N-terminal subunit [Clostridium perfringens ATCC 13124] gi|110675375|gb|ABG84362.1| putative transketolase, N-terminal subunit [Clostridium perfringens ATCC 13124] Length = 274 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +GQV+E+ AA + L N+ ++ Sbjct: 117 GSLGQGISAAVGMALAGKLDNKDYRVFTILGDGELEEGQVWEAAMSAAHYRLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + + + K+ +F + ++G D + + KA ++ KG P Sbjct: 177 FNGLQIDGDIKEVMSPCPIDKKFEAFGWNVIVINGHDYEEIINAIQKA----KSTKGAPT 232 Query: 276 IIEMLTYRYRGHSM 289 I T + +G S Sbjct: 233 CIVCNTVKGKGVSF 246 >gi|227821074|ref|YP_002825044.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium fredii NGR234] gi|227340073|gb|ACP24291.1| 1-deoxy-D-xylulose 5-phosphate synthase [Sinorhizobium fredii NGR234] Length = 645 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 18/68 (26%), Positives = 31/68 (45%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A + + GDGA + G YE+ N A + +I ++ +N ++ Sbjct: 131 ISAGLGMAVAADLDGKSRNVIAVIGDGALSAGMAYEALNNAGALDARLIVILNDNDMSIA 190 Query: 224 TSVSRASA 231 SA Sbjct: 191 PPTGAMSA 198 >gi|125829873|ref|XP_685690.2| PREDICTED: transketolase-like [Danio rerio] Length = 628 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 2/108 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + + G+A+ KY V C GDG ++G V+E+ A+ + L N++ ++ Sbjct: 123 GSLGQGLGVACGMAYTAKYFDKSSYRVYCLLGDGEMSEGAVWEAMAFASYYQLDNLMAIL 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 + N+ + +R +F + VDG + + M + Sbjct: 183 DINRLGQSDPAPLQHHVEKYQRRCEAFGWHAIIVDGHSVEELCKAMSQ 230 >gi|150399192|ref|YP_001322959.1| transketolase [Methanococcus vannielii SB] gi|150011895|gb|ABR54347.1| Transketolase [Methanococcus vannielii SB] Length = 275 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S G+A K + V GDG +GQ++E+ A+ + L N+I ++ Sbjct: 120 GSLGQGFSSSVGVAIGCKLNNYENYVFVLLGDGECQEGQIWEASMAASHYKLDNLIGFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N+ + + + +F ++DG + + T++ A Sbjct: 180 RNKLQIDGCTEDVMCLGDLKAKFNAFGFDVFEIDGHNYEEIIKTVENA 227 >gi|113954753|ref|YP_730616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. CC9311] gi|123132556|sp|Q0IAA6|DXS_SYNS3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|113882104|gb|ABI47062.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. CC9311] Length = 647 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%) Query: 129 LTGRQGGIS--KGKGG-SMHMFSTKNGF-YGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 +TGR G + +GG + ++ T++ F + G G +S G+A A + D CV Sbjct: 80 ITGRYGSFDSLRQQGGVAGYLKRTESRFDHFGAGHASTSISAALGMAIARDRQGLDYKCV 139 Query: 185 VCFGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVSRASAQTN 234 GDGA G E+ N A L + ++ V+ +N ++ V S N Sbjct: 140 AVIGDGALTGGMALEAINHAGHLPSTPLLVVLNDNDMSISPPVGALSTYLN 190 >gi|322833843|ref|YP_004213870.1| 2-oxoglutarate dehydrogenase, E1 subunit [Rahnella sp. Y9602] gi|321169044|gb|ADW74743.1| 2-oxoglutarate dehydrogenase, E1 subunit [Rahnella sp. Y9602] Length = 935 Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust. Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 5/134 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+ N++ V + ++ NNQ TS + + T++ + Sbjct: 352 LPITIHGDAAITGQGVVQETLNMSLARGYEVGGTVRIVINNQVGFTTSNPKDARSTDYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 P V+ D AV A+ + K ++I+++ YR GH+ +D + Sbjct: 412 DIAKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEADEPSAT 471 Query: 297 TREEINEMRSNHDP 310 N+++ + P Sbjct: 472 QPLMYNKIKKHPTP 485 >gi|110005265|emb|CAK99590.1| putative transketolase protein [Spiroplasma citri] Length = 662 Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 30/218 (13%) Query: 158 GIVGAQVSLGTGIAFANK----------YRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 G +G V G G+A + + Y+ D V DG +G E+ +A +W Sbjct: 119 GPLGQGVGYGVGMALSEQHLAAKFNKPDYKIIDHYTYVLCSDGDLQEGGAIEAIQLAGVW 178 Query: 208 NLN-VIYVIENNQYAMGT---SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 LN +I + ++N + T +V + Q F + ++N ++ D+ A++ K Sbjct: 179 KLNKLIMLYDSNDCQLDTKCDAVLKIDYQRFFEAQ--NWNYIRIENADEDLPAIQ----K 232 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR---TREEINEMRSNHD---P---IEQV 314 A+ + P +IE T GH + T EE++++++ +D P ++ Sbjct: 233 AIEQAQKSDKPTLIECKTIIGYGHPKQGSPMHSSPFTSEEMDQVKAFYDFNHPQFYVDND 292 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 K+ + +A G +K E +KI EF + +E Sbjct: 293 VKKHWQDTFAKRGAIKYEEWK-KKITAYKTEFPKEYEE 329 >gi|167040178|ref|YP_001663163.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacter sp. X514] gi|300914261|ref|ZP_07131577.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter sp. X561] gi|307724503|ref|YP_003904254.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter sp. X513] gi|166854418|gb|ABY92827.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter sp. X514] gi|300889196|gb|EFK84342.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter sp. X561] gi|307581564|gb|ADN54963.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter sp. X513] Length = 620 Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 5/101 (4%) Query: 157 HGIVGA-----QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNV 211 H I GA +S GIA A + V GDGA G +E+ N A ++ Sbjct: 106 HDIFGAGHSSTSISAALGIAKARDLKGEKYSVVAVIGDGALTGGMAFEALNNAGRSKTDL 165 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 I V+ +N+ ++ +V S + + ++N +VD + Sbjct: 166 IVVLNHNEMSISENVGSLSLYLSKLRTDPTYNKLKQEVDNL 206 >gi|160942637|ref|ZP_02089881.1| hypothetical protein FAEPRAM212_00110 [Faecalibacterium prausnitzii M21/2] gi|158446052|gb|EDP23055.1| hypothetical protein FAEPRAM212_00110 [Faecalibacterium prausnitzii M21/2] Length = 283 Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust. Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 1/105 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A K+ S GDG +G+ +E+F AA + L N+ +++ Sbjct: 118 GSLGQGISAACGMALGAKHAGSAVNVYAILGDGEVEEGECWEAFMFAAHYGLSNLCVMLD 177 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 N + + + +FN + ++G D +++ + Sbjct: 178 RNHLQIDGTTETVMNSAPLEDKLRAFNFNVVTINGHDFDQIESAV 222 >gi|126698803|ref|YP_001087700.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium difficile 630] gi|118595503|sp|Q18B68|DXS_CLOD6 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|115250240|emb|CAJ68061.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium difficile] Length = 621 Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust. Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 2/79 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S+ TGIA A ++ + + GDG+ G E+ N Sbjct: 107 SPHDIFDTGHS--STSISIATGIACARDIKKENYSVISVIGDGSITGGMALEALNQLGYI 164 Query: 208 NLNVIYVIENNQYAMGTSV 226 + N+I ++ +N+ ++ +V Sbjct: 165 DTNMIVILNDNEMSIDKNV 183 >gi|257063535|ref|YP_003143207.1| 1-deoxy-D-xylulose-5-phosphate synthase [Slackia heliotrinireducens DSM 20476] gi|256791188|gb|ACV21858.1| 1-deoxy-D-xylulose-5-phosphate synthase [Slackia heliotrinireducens DSM 20476] Length = 630 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 19/80 (23%), Positives = 38/80 (47%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S+ G+A A R SD+ V GD A + G +E+ N ++ ++ +N+ ++ Sbjct: 121 LSVALGLAMARDLRGSDEKIVSIIGDAALSGGMAFEALNQIGQVQTPMVVILNDNEMSIA 180 Query: 224 TSVSRASAQTNFSKRGVSFN 243 +V S+ S+ S+ Sbjct: 181 KNVGALSSYLGRSRTSRSYT 200 >gi|317402860|gb|EFV83402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter xylosoxidans C54] Length = 620 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 9/105 (8%) Query: 129 LTGRQGGISKGKG-GSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G++K + G + F + + F H +LG +A N + I Sbjct: 83 LTGRRAGMAKLRQVGGISGFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGVQRQHI 142 Query: 183 CVVCFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAMGTSV 226 V+ GDGA + G +E+ N A + ++N++ ++ +N ++ V Sbjct: 143 AVI--GDGAMSAGMAFEAMNNAGVTADINLLVILNDNDMSISPPV 185 >gi|291460059|ref|ZP_06599449.1| 1-deoxy-D-xylulose 5-phosphate synthase [Oribacterium sp. oral taxon 078 str. F0262] gi|291417400|gb|EFE91119.1| 1-deoxy-D-xylulose 5-phosphate synthase [Oribacterium sp. oral taxon 078 str. F0262] Length = 662 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH ++LG A K R + I V+ GDG+ + G+ E NIA Sbjct: 175 SPHDFFEIGHTSTSIDLALGLAKARDLKGERENIIAVI--GDGSLSGGEALEGLNIAGEL 232 Query: 208 NLNVIYVIENNQYAMG 223 + N I ++ +NQ ++ Sbjct: 233 STNFIILVNDNQMSIA 248 >gi|241667760|ref|ZP_04755338.1| alpha-ketoglutarate decarboxylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876304|ref|ZP_05249014.1| 2-oxoglutarate dehydrogenase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842325|gb|EET20739.1| 2-oxoglutarate dehydrogenase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 934 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 12/119 (10%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTS----VSRASA-Q 232 + ++ GD A QG V E+F + A ++++ NNQ TS V+R+S Sbjct: 347 LPILIHGDSAFCGQGIVMETFGFSLTEAYGTGGTVHLVVNNQVGFTTSSTFGVNRSSNYS 406 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 T+ +K + P V+ D AV D A+ Y ++I+++ YR GH+ +D Sbjct: 407 TDIAKM---VDAPIFHVNCDDPEAVLKVADIALEYRMKFNKDVVIDLVCYRRNGHNETD 462 >gi|189466295|ref|ZP_03015080.1| hypothetical protein BACINT_02669 [Bacteroides intestinalis DSM 17393] gi|189434559|gb|EDV03544.1| hypothetical protein BACINT_02669 [Bacteroides intestinalis DSM 17393] Length = 275 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 13/127 (10%) Query: 144 MHMFSTKNGFYGGH------GIVGAQVSLGTGIAFA---NKYRRSDKI---CVVCFGDGA 191 ++ + NG GH G+ A +SLG ++FA + Y + + + V GD Sbjct: 95 LNSYEEDNGLLVGHQRNLDLGLEYASLSLGMELSFAVGKSIYAKQNNLPYHVYVLLGDAE 154 Query: 192 ANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD 250 N+G ++E+ A + L N+ +++ N A+ + AQ + + SF V+ Sbjct: 155 CNEGSIWEAVLTAGHYKLDNLTVIVDRNYMAVDGNTEDWMAQMDMELKFKSFGWESKTVN 214 Query: 251 GMDIRAV 257 G + + Sbjct: 215 GHSVEQL 221 >gi|167627197|ref|YP_001677697.1| 2-oxoglutarate dehydrogenase E1 component [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597198|gb|ABZ87196.1| Oxoglutarate dehydrogenase (succinyl-transferring) [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 934 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 12/119 (10%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIA---ALWNLNVIYVIENNQYAMGTS----VSRASA-Q 232 + ++ GD A QG V E+F + A ++++ NNQ TS V+R+S Sbjct: 347 LPILIHGDSAFCGQGIVMETFGFSLTEAYGTGGTVHLVVNNQVGFTTSSTFGVNRSSNYS 406 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 T+ +K + P V+ D AV D A+ Y ++I+++ YR GH+ +D Sbjct: 407 TDIAKM---VDAPIFHVNCDDPEAVLKVADIALEYRMKFNKDVVIDLVCYRRNGHNETD 462 >gi|18309278|ref|NP_561212.1| transketolase N-terminal section [Clostridium perfringens str. 13] gi|168207442|ref|ZP_02633447.1| transketolase, thiamine diphosphate binding domain [Clostridium perfringens E str. JGS1987] gi|168210409|ref|ZP_02636034.1| Transketolase, thiamine diphosphate binding domain [Clostridium perfringens B str. ATCC 3626] gi|168212785|ref|ZP_02638410.1| transketolase, thiamine diphosphate binding domain [Clostridium perfringens CPE str. F4969] gi|168216615|ref|ZP_02642240.1| putative transketolase, N-terminal subunit [Clostridium perfringens NCTC 8239] gi|169344067|ref|ZP_02865055.1| putative transketolase, N-terminal subunit [Clostridium perfringens C str. JGS1495] gi|182626833|ref|ZP_02954570.1| transketolase, thiamine diphosphate binding domain [Clostridium perfringens D str. JGS1721] gi|18143954|dbj|BAB80002.1| transketolase N-terminal section [Clostridium perfringens str. 13] gi|169297802|gb|EDS79899.1| putative transketolase, N-terminal subunit [Clostridium perfringens C str. JGS1495] gi|170661191|gb|EDT13874.1| transketolase, thiamine diphosphate binding domain [Clostridium perfringens E str. JGS1987] gi|170711462|gb|EDT23644.1| Transketolase, thiamine diphosphate binding domain [Clostridium perfringens B str. ATCC 3626] gi|170715810|gb|EDT27992.1| transketolase, thiamine diphosphate binding domain [Clostridium perfringens CPE str. F4969] gi|177907842|gb|EDT70442.1| transketolase, thiamine diphosphate binding domain [Clostridium perfringens D str. JGS1721] gi|182381317|gb|EDT78796.1| putative transketolase, N-terminal subunit [Clostridium perfringens NCTC 8239] Length = 274 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 6/134 (4%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S G+A A K D GDG +GQV+E+ AA + L N+ ++ Sbjct: 117 GSLGQGISAAVGMALAGKLDNKDYRVFTILGDGELEEGQVWEAAMSAAHYRLDNLTAFVD 176 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-PI 275 N + + + K+ +F + ++G D + + KA ++ KG P Sbjct: 177 FNGLQIDGDIKEVMSPCPIDKKFEAFGWNVIVINGHDYEEIINAIQKA----KSTKGAPT 232 Query: 276 IIEMLTYRYRGHSM 289 I T + +G S Sbjct: 233 CIVCNTVKGKGVSF 246 >gi|332800025|ref|YP_004461524.1| Transketolase [Tepidanaerobacter sp. Re1] gi|332697760|gb|AEE92217.1| Transketolase [Tepidanaerobacter sp. Re1] Length = 281 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G+A + + D GDG +GQ++E+ + + L N+ V++ Sbjct: 124 GSLGQGLSVAVGLALGARLKNKDYKIYAIIGDGEMQEGQIWEALMASIHYKLDNLTIVLD 183 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 N+ + + + + N R +F ++DG Sbjct: 184 YNKLQIDGTNNEVLSLGNVKDRMQAFGFNVYEIDG 218 >gi|325567578|ref|ZP_08144245.1| transketolase [Enterococcus casseliflavus ATCC 12755] gi|325159011|gb|EGC71157.1| transketolase [Enterococcus casseliflavus ATCC 12755] Length = 278 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 1/107 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + GIA A K GDG +G V+E AA + L N+ +I+ Sbjct: 114 GSLGHGLPVAVGIALAGKLDHRTYQTYTLLGDGELAEGSVWEGAMAAANYQLDNLTAIID 173 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 N + + A ++ +F VDG D+ A+ A ++K Sbjct: 174 RNGLQITGASEDVMAVEPLDEKWRAFGWDVHIVDGNDMAALVAALEK 220 >gi|310767022|gb|ADP11972.1| 2-oxoglutarate dehydrogenase E1 component [Erwinia sp. Ejp617] Length = 935 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 11/160 (6%) Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR--SDKIC-VVCFGDGAA-NQG 195 +GG +H+ F H + + V +G+ A ++ + S+K+ + GD A QG Sbjct: 310 EGGMVHL---ALAFNPSHLEIVSPVVMGSVRARLDRLDQPGSNKVLPITIHGDAAVIGQG 366 Query: 196 QVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDG 251 V E+ N++ V + ++ NNQ TS + + T + + G P V+ Sbjct: 367 VVQETLNMSEARGYEVGGTVRIVINNQIGFTTSNPKDARSTQYCTDIGKMVMAPIFHVNA 426 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 D AV A+ + K + I+++ YR GH+ +D Sbjct: 427 DDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEAD 466 >gi|215478266|gb|ACJ67020.1| 1-deoxy-D-xylulose 5-phosphate synthase type II [Pinus taeda] Length = 740 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 8/97 (8%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ +S + G + S + F GH +S G+A Sbjct: 172 LTGRRSKMSTLRQTSGIAGFPRRVESEHDAFGAGHS--STSISAAVGMAVGRDLLGKHNH 229 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA GQ YE+ N A + N+I ++ +N+ Sbjct: 230 VIGVIGDGAMTAGQAYEAMNNAGFLDSNMIIILNDNK 266 >gi|302876208|ref|YP_003844841.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium cellulovorans 743B] gi|307686940|ref|ZP_07629386.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium cellulovorans 743B] gi|302579065|gb|ADL53077.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium cellulovorans 743B] Length = 586 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 19/174 (10%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI--TA 108 +ELS+ L+++ E G + G G L + V K D+++ + Sbjct: 21 KELSSEIRQALLKKLSEHGGHI---GPNLGIVELTVALHHVFNSPK------DKIVYDVS 71 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 ++ + H + G + I +E G S + F+ GH +SL Sbjct: 72 HQSYVHKMLTGRKEAFINSEKYDDVSGYSNPEESDHDFFNI------GH--TSTSISLAC 123 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 G+A A + + GDG+ + G+ YE N AA N+I ++ +N ++ Sbjct: 124 GLAKARDLKDEKDNVIAIIGDGSLSGGEAYEGLNNAAEAGTNMIIIVNDNDMSI 177 >gi|187933649|ref|YP_001885777.1| transketolase [Clostridium botulinum B str. Eklund 17B] gi|187721802|gb|ACD23023.1| transketolase [Clostridium botulinum B str. Eklund 17B] Length = 271 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 16/181 (8%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 + G + +G S H+ +G G +G +S G+A K ++++ V GDG Sbjct: 93 KTGALLQGHPDSKHV----SGVDVSTGSLGQGISNAVGMALGLKTQKNNAKIYVVLGDGE 148 Query: 192 ANQGQVYESFNIAALWNL-NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV- 249 +G V+E+ AA + L N++ +++NN + + K+ SF G V Sbjct: 149 LQEGLVWEASMAAAHYKLNNLVAIVDNNGLQIDGKNEDVMGISPLDKKFESF---GWNVV 205 Query: 250 ---DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS-MSDPANYRTREEINEMR 305 DG D + + + + P +I T + +G S M D A + + E R Sbjct: 206 ICEDGNDFDKINEAF---LEVEKCNDKPSVIIAKTVKGKGVSFMEDQAGWHGQAPNEEQR 262 Query: 306 S 306 + Sbjct: 263 N 263 >gi|149197723|ref|ZP_01874773.1| alpha-ketoglutarate decarboxylase [Lentisphaera araneosa HTCC2155] gi|149139293|gb|EDM27696.1| alpha-ketoglutarate decarboxylase [Lentisphaera araneosa HTCC2155] Length = 913 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 4/142 (2%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + ++ GD A + QG +YE N+A L ++V+ NNQ + + + + Sbjct: 323 VPILVHGDAAISGQGIIYEICNMANLDGYGTGGTVHVVLNNQVGFTANYRESRSSLYCTD 382 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 N P V+ D AV A+ + + I++L YR GH+ D + Sbjct: 383 IAKVLNSPVFHVNADDPEAVVHACTTAIELRQKFACDVYIDILGYRRHGHNEGDEPRFTQ 442 Query: 298 REEINEMRSNHDPIEQVRKRLL 319 N + + ++ KRL+ Sbjct: 443 PLLYNAITKHPTVLDMYIKRLV 464 >gi|82775994|ref|YP_402341.1| 2-oxoglutarate dehydrogenase E1 component [Shigella dysenteriae Sd197] gi|309786389|ref|ZP_07681015.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Shigella dysenteriae 1617] gi|81240142|gb|ABB60852.1| 2-oxoglutarate dehydrogenase, decarboxylase component [Shigella dysenteriae Sd197] gi|308925783|gb|EFP71264.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Shigella dysenteriae 1617] Length = 933 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 5/156 (3%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+ N++ V + ++ NNQ TS + T + + Sbjct: 350 LPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCT 409 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 G P V+ D AV A+ + K + I+++ YR GH+ +D + Sbjct: 410 DIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSAT 469 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +++ + P + +L K A+ D E+ Sbjct: 470 QPLMYQKIKKHPTPCKIYADKLEQEKVATLEDATEM 505 >gi|194432557|ref|ZP_03064843.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella dysenteriae 1012] gi|194419118|gb|EDX35201.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella dysenteriae 1012] gi|332085603|gb|EGI90767.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shigella dysenteriae 155-74] Length = 620 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%) Query: 129 LTGRQG--GISKGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ G + KGG +H F S + GH +S G GIA A + ++ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHS--STSISAGIGIAVAAEKEGKNR 144 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G +E+ N A +++ V+ +N+ ++ +V Sbjct: 145 RTVCVIGDGAITAGMAFEAMNHAGDILPDMLVVLNDNEMSISENV 189 >gi|260173767|ref|ZP_05760179.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides sp. D2] gi|315922031|ref|ZP_07918271.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides sp. D2] gi|313695906|gb|EFS32741.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides sp. D2] Length = 585 Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust. Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 24/170 (14%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH VSL +G+A ++ + GDG+ + G+ +E + A Sbjct: 105 SEHDFFIIGH--TSTSVSLASGLAKGRDLTGGNENIIAVIGDGSLSGGEAFEGLDYVAEL 162 Query: 208 NLNVIYVIENNQYAMGTS------------VSRASAQTNFSKRGVSFNIPGMQV-DGMDI 254 N+I ++ +NQ ++ + S + NF K + + M V DG ++ Sbjct: 163 GTNMIIIVNDNQMSIAENHGGLYKNLKELRDSNGQCECNFFK---AMGLDYMYVNDGNNV 219 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEIN 302 +A + +A + + + PI++ + T + +G++ + D Y R N Sbjct: 220 QA----LIEAFSKVKDIQHPIVVHINTLKGKGYARAEQDKETYHWRTPFN 265 >gi|37519763|ref|NP_923140.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gloeobacter violaceus PCC 7421] gi|41016943|sp|Q7NP63|DXS_GLOVI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|35210754|dbj|BAC88135.1| 1-deoxy-xylulose 5-phosphate synthase [Gloeobacter violaceus PCC 7421] Length = 638 Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 13/109 (11%) Query: 139 GKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 G+ + H K+G G G G +S G+A A ++ ++ V Sbjct: 82 GRYANFHTLRQKDGLAGYLKRAESPFDCWGAGHASTSISAALGMALARDFQGLNRKVVAI 141 Query: 187 FGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVSRASAQTN 234 GDGA G E+ N A L N++ ++ +N+ ++ +V S N Sbjct: 142 IGDGALTGGMALEALNHAGHLSKTNLMVILNDNEMSISENVGGLSLYLN 190 >gi|291558608|emb|CBL37408.1| 1-deoxy-D-xylulose-5-phosphate synthase [butyrate-producing bacterium SSC/2] Length = 623 Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 11/115 (9%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G + G S + F+ GH + +LG + A +D+ Sbjct: 79 LTGRKNGFENLRQFHGMSGFPKRKESDCDAFHSGHSSMSLSAALG--MVTARDINHTDET 136 Query: 183 CVVCFGDGAANQGQVYESFNIAALW---NLNVIYVIENNQYAMGTSVSRASAQTN 234 V GDGA + G YE+ N A N+I ++ +N+ ++ +V A N Sbjct: 137 IVAVIGDGALSGGMAYEALNNMARLRKEKKNLIIILNDNKMSIAENVGGMFAYLN 191 >gi|109947354|ref|YP_664582.1| transketolase [Helicobacter acinonychis str. Sheeba] gi|109714575|emb|CAJ99583.1| tktA [Helicobacter acinonychis str. Sheeba] Length = 641 Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust. Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 11/116 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRR--------SDKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G + G + A++Y + S K+ +C GDG +G YES ++A + L Sbjct: 120 GPLGQGFANAVGFSMASQYAQNLLDKETISHKVYCLC-GDGDLQEGISYESASLAGHFRL 178 Query: 210 -NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N+I + ++NQ ++ +++ S R ++ N ++ DG + +A+ ++KA Sbjct: 179 DNLIVIYDSNQISIEGAIN-ISFSEQVKTRFLAQNWEVLECDGHNYQAINDALEKA 233 >gi|312171761|emb|CBX80019.1| 2-oxoglutarate dehydrogenase E1 component [Erwinia amylovora ATCC BAA-2158] Length = 935 Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 11/160 (6%) Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR--SDKIC-VVCFGDGAA-NQG 195 +GG +H+ F H + + V +G+ A ++ + S+K+ + GD A QG Sbjct: 310 EGGMVHL---ALAFNPSHLEIVSPVVMGSVRARLDRLDQPGSNKVLPITIHGDAAVIGQG 366 Query: 196 QVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDG 251 V E+ N++ V + ++ NNQ TS + + T + + G P V+ Sbjct: 367 VVQETLNMSEARGYEVGGTVRIVINNQIGFTTSNPKDARSTQYCTDIGKMVMAPIFHVNA 426 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 D AV A+ + K + I+++ YR GH+ +D Sbjct: 427 DDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEAD 466 >gi|149181864|ref|ZP_01860353.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacillus sp. SG-1] gi|148850403|gb|EDL64564.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacillus sp. SG-1] Length = 630 Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 8/104 (7%) Query: 129 LTGRQGGIS-----KGKGGSMHMFSTKNGFY-GGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR G KG G M +++ + GH +S G+A A ++ D Sbjct: 80 LTGRAGQFGTLRQYKGLCGFPKMVESEHDVWETGHS--STSLSAAMGMAIARDVKKEDSF 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 V GDGA G E+ N ++I V+ +N+ ++ +V Sbjct: 138 IVPVIGDGALTGGMALEALNHIGHEQKDMIVVLNDNEMSIAPNV 181 >gi|148229158|ref|NP_001079885.1| transketolase-like 2 [Xenopus laevis] gi|8515825|gb|AAF76194.1| transketolase [Xenopus laevis] gi|33585659|gb|AAH56101.1| MGC69114 protein [Xenopus laevis] Length = 625 Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+ A+ ++L N++ + Sbjct: 123 GSLGQGLGASCGMAYTGKYFDKASYRVYCLLGDGESSEGAVWEAMAFASHYHLDNLVAIF 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 + N+ + + KR +F VDG D+ Sbjct: 183 DVNRLGQSEAAPLQHQTDIYMKRCEAFGWNTYVVDGHDV 221 >gi|52425114|ref|YP_088251.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia succiniciproducens MBEL55E] gi|81609544|sp|Q65TP4|DXS_MANSM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|52307166|gb|AAU37666.1| Dxs protein [Mannheimia succiniciproducens MBEL55E] Length = 617 Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/63 (25%), Positives = 34/63 (53%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G GIA A + + + + GDGA G +E+ N A + +++ ++ +N+ ++ Sbjct: 123 ISAGLGIAIAAEKENAGRKIICVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSIS 182 Query: 224 TSV 226 +V Sbjct: 183 ENV 185 >gi|33593754|ref|NP_881398.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella pertussis Tohama I] gi|41016953|sp|Q7VV87|DXS_BORPE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|33563827|emb|CAE43071.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella pertussis Tohama I] gi|332383156|gb|AEE68003.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella pertussis CS] Length = 620 Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 7/102 (6%) Query: 126 MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVV 185 MA L +QGGIS G S + F H +LG +A N + I V+ Sbjct: 90 MAHLR-QQGGIS---GFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGVQRQHIAVI 145 Query: 186 CFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAMGTSV 226 GDGA + G +E+ N A + N+N++ V+ +N ++ V Sbjct: 146 --GDGAMSAGMAFEAMNNAGVTPNINLLVVLNDNDMSISPPV 185 >gi|215478268|gb|ACJ67021.1| 1-deoxy-D-xylulose 5-phosphate synthase type I [Pinus taeda] Length = 707 Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 8/97 (8%) Query: 129 LTGRQGGISKGK------GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ +S + G + S + F GH +S G+A Sbjct: 145 LTGRRSKMSTLRQTSGIAGFPRRVESEHDAFGAGHS--STSISAAVGMAVGRDLLGKHNH 202 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA GQ YE+ N A + N+I ++ +N+ Sbjct: 203 VIGVIGDGAMTAGQAYEAMNNAGFLDSNMIVILNDNK 239 >gi|41033653|emb|CAF18493.1| transketolase N-terminal subunit [Thermoproteus tenax] Length = 289 Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust. Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 5/130 (3%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G + + G+A K + + GDG ++G +ES +AA + L N+I +++ Sbjct: 137 GSLGLGIGMAVGLALGLKLKGHAGKVFLITGDGELDEGISWESMAVAASYKLNNLIVIVD 196 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 +N+ + + + + R S VDG +I + KA+ + P Sbjct: 197 HNKAQLDGFSEEVLRKGDIAGRFRSLGFFVQVVDGHNI----GELVKAIEAAERSEAPSA 252 Query: 277 IEMLTYRYRG 286 I T R RG Sbjct: 253 IIAETVRGRG 262 >gi|237625980|gb|ACR02668.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Amomum villosum] Length = 715 Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust. Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +LG + R+++ I V+ GDG+ GQ YE+ N A Sbjct: 174 SDYDAFGAGHSSTSISAALGMAVGRDLMGRKNNVIAVI--GDGSMTAGQAYEAMNNAGYL 231 Query: 208 NLNVIYVIENNQ 219 + ++I ++ +N+ Sbjct: 232 DSDMIVILNDNK 243 >gi|259909078|ref|YP_002649434.1| 2-oxoglutarate dehydrogenase E1 component [Erwinia pyrifoliae Ep1/96] gi|224964700|emb|CAX56217.1| 2-oxoglutarate dehydrogenase E1 component [Erwinia pyrifoliae Ep1/96] gi|283479104|emb|CAY75020.1| 2-oxoglutarate dehydrogenase E1 component [Erwinia pyrifoliae DSM 12163] Length = 935 Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 11/160 (6%) Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR--SDKIC-VVCFGDGAA-NQG 195 +GG +H+ F H + + V +G+ A ++ + S+K+ + GD A QG Sbjct: 310 EGGMVHL---ALAFNPSHLEIVSPVVMGSVRARLDRLDQPGSNKVLPITIHGDAAVIGQG 366 Query: 196 QVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDG 251 V E+ N++ V + ++ NNQ TS + + T + + G P V+ Sbjct: 367 VVQETLNMSEARGYEVGGTVRIVINNQIGFTTSNPKDARSTQYCTDIGKMVMAPIFHVNA 426 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 D AV A+ + K + I+++ YR GH+ +D Sbjct: 427 DDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEAD 466 >gi|159905934|ref|YP_001549596.1| transketolase domain-containing protein [Methanococcus maripaludis C6] gi|159887427|gb|ABX02364.1| Transketolase domain protein [Methanococcus maripaludis C6] Length = 275 Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust. Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 1/108 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G S G+A K + + V GDG +GQV+E+ AA + L N+I ++ Sbjct: 120 GSLGQGFSSSVGVAIGCKLNKYENNVFVLLGDGECQEGQVWEAAMAAAHYKLDNLIGFVD 179 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 N+ + + + F +++G + + T + A Sbjct: 180 RNKLQIDGCTEDVMCLADLKAKFAGFGFDVFEIEGHNFEEIIKTAELA 227 >gi|160880643|ref|YP_001559611.1| deoxyxylulose-5-phosphate synthase [Clostridium phytofermentans ISDg] gi|189027773|sp|A9KMB8|DXS_CLOPH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|160429309|gb|ABX42872.1| deoxyxylulose-5-phosphate synthase [Clostridium phytofermentans ISDg] Length = 625 Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 7/90 (7%) Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 + F GH +S+ G+ A + + V GDGA + G +E+ N A N Sbjct: 110 DAFDTGHS--STSLSVAVGLVKARELSEEQRKVVAVIGDGALSGGMAFEALNNAGRLKEN 167 Query: 211 VIYVIENNQYAMGTSVSRAS-----AQTNF 235 +I V+ +N ++ +V S A+TN+ Sbjct: 168 MIIVLNDNNMSISENVGGMSNYLGKARTNY 197 >gi|57506037|ref|ZP_00371960.1| deoxyxylulose-5-phosphate synthase [Campylobacter upsaliensis RM3195] gi|57015645|gb|EAL52436.1| deoxyxylulose-5-phosphate synthase [Campylobacter upsaliensis RM3195] Length = 611 Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%) Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F GH +SL G A + ++ ++ VV GDGA + G VYE+ N + Sbjct: 107 FIAGHS--STSISLAIGACKAIRLKKEERTPVVLIGDGALSAGMVYEALNELGDRKYPCV 164 Query: 213 YVIENNQYAMGTSVSRAS 230 ++ +N+ ++ + S Sbjct: 165 IILNDNEMSISKPIGAIS 182 >gi|330876807|gb|EGH10956.1| transketolase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 278 Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust. Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 1/107 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI-E 216 G +G + + G+A A K S+K V GDG +G +E+ AA + L+ ++VI + Sbjct: 121 GALGHGLPVAVGLALAAKMSGSNKRIYVLTGDGELAEGSNWEAAMAAAKYGLDNLFVIVD 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 N+ + + + +F + DG D+ + +++ Sbjct: 181 KNKLQLAGLTAEIMPLDPLDAKWAAFGFTVSECDGNDVGQLVTALEQ 227 >gi|292487653|ref|YP_003530526.1| 2-oxoglutarate dehydrogenase E1 component [Erwinia amylovora CFBP1430] gi|292898890|ref|YP_003538259.1| 2-oxoglutarate dehydrogenase E1 component [Erwinia amylovora ATCC 49946] gi|291198738|emb|CBJ45847.1| 2-oxoglutarate dehydrogenase E1 component [Erwinia amylovora ATCC 49946] gi|291553073|emb|CBA20118.1| 2-oxoglutarate dehydrogenase E1 component [Erwinia amylovora CFBP1430] Length = 935 Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 11/160 (6%) Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR--SDKIC-VVCFGDGAA-NQG 195 +GG +H+ F H + + V +G+ A ++ + S+K+ + GD A QG Sbjct: 310 EGGMVHL---ALAFNPSHLEIVSPVVMGSVRARLDRLDQPGSNKVLPITIHGDAAVIGQG 366 Query: 196 QVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-SKRGVSFNIPGMQVDG 251 V E+ N++ V + ++ NNQ TS + + T + + G P V+ Sbjct: 367 VVQETLNMSEARGYEVGGTVRIVINNQIGFTTSNPKDARSTQYCTDIGKMVMAPIFHVNA 426 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 D AV A+ + K + I+++ YR GH+ +D Sbjct: 427 DDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEAD 466 >gi|254707835|ref|ZP_05169663.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis M163/99/10] gi|261315322|ref|ZP_05954519.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis M163/99/10] gi|261304348|gb|EEY07845.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis M163/99/10] Length = 643 Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|62289421|ref|YP_221214.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1 str. 9-941] gi|189023672|ref|YP_001934440.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus S19] gi|254696862|ref|ZP_05158690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 2 str. 86/8/59] gi|260545827|ref|ZP_05821568.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus NCTC 8038] gi|260761258|ref|ZP_05873601.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 2 str. 86/8/59] gi|75497245|sp|Q57ET1|DXS_BRUAB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|229813263|sp|B2S9T6|DXS_BRUA1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|62195553|gb|AAX73853.1| Dxs, deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 1 str. 9-941] gi|189019244|gb|ACD71966.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus S19] gi|260097234|gb|EEW81109.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus NCTC 8038] gi|260671690|gb|EEX58511.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 2 str. 86/8/59] Length = 643 Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|313672240|ref|YP_004050351.1| 1-deoxy-d-xylulose-5-phosphate synthase [Calditerrivibrio nitroreducens DSM 19672] gi|312938996|gb|ADR18188.1| 1-deoxy-D-xylulose-5-phosphate synthase [Calditerrivibrio nitroreducens DSM 19672] Length = 620 Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 2/83 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH +S G G+ A ++ D V GDG+ G +E N A Sbjct: 106 SPYDAFGVGHS--STSISAGLGLKVAGTLQQKDIKTVAVIGDGSMTAGIAFEGLNNAGHL 163 Query: 208 NLNVIYVIENNQYAMGTSVSRAS 230 N++ ++ +N+ ++ +V S Sbjct: 164 KQNLVVILNDNEMSISPNVGALS 186 >gi|237749331|ref|ZP_04579811.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes OXCC13] gi|229380693|gb|EEO30784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes OXCC13] Length = 619 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAM 222 +S G+A A K + D + GDGA G +E+ N ++ ++N++ ++ +N ++ Sbjct: 120 ISAALGMALAAKLKGEDTYSIAVIGDGAITGGMAFEAMNNVGVYDDINMLVILNDNDMSI 179 Query: 223 GTSV 226 V Sbjct: 180 SPPV 183 >gi|82699348|ref|YP_413922.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis biovar Abortus 2308] gi|237814909|ref|ZP_04593907.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus str. 2308 A] gi|118595496|sp|Q2YMF0|DXS_BRUA2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|82615449|emb|CAJ10418.1| Transketolase, N terminal:Transketolase, central region:Transketolase, C terminal:Deoxyxylulose-5-phosphate synthase [Brucella melitensis biovar Abortus 2308] gi|237789746|gb|EEP63956.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus str. 2308 A] Length = 643 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|33597052|ref|NP_884695.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella parapertussis 12822] gi|33600897|ref|NP_888457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella bronchiseptica RB50] gi|41016954|sp|Q7W7Q0|DXS_BORPA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|41016955|sp|Q7WL37|DXS_BORBR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|33566503|emb|CAE37759.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella parapertussis] gi|33568497|emb|CAE32409.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica RB50] Length = 620 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 7/102 (6%) Query: 126 MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVV 185 MA L +QGGIS G S + F H +LG +A N + I V+ Sbjct: 90 MAHLR-QQGGIS---GFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGVQRQHIAVI 145 Query: 186 CFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAMGTSV 226 GDGA + G +E+ N A + N+N++ V+ +N ++ V Sbjct: 146 --GDGAMSAGMAFEAMNNAGVTPNINLLVVLNDNDMSISPPV 185 >gi|254688734|ref|ZP_05151988.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 6 str. 870] gi|254729767|ref|ZP_05188345.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 4 str. 292] gi|256256981|ref|ZP_05462517.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 9 str. C68] gi|260754213|ref|ZP_05866561.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 6 str. 870] gi|260757433|ref|ZP_05869781.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 4 str. 292] gi|260883238|ref|ZP_05894852.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 9 str. C68] gi|297247834|ref|ZP_06931552.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 5 str. B3196] gi|260667751|gb|EEX54691.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 4 str. 292] gi|260674321|gb|EEX61142.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 6 str. 870] gi|260872766|gb|EEX79835.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 9 str. C68] gi|297175003|gb|EFH34350.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 5 str. B3196] Length = 643 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|182417939|ref|ZP_02949249.1| 1-deoxy-d-xylulose-5-phosphate synthase [Clostridium butyricum 5521] gi|237669304|ref|ZP_04529286.1| 1-deoxy-d-xylulose-5-phosphate synthase (1-deoxyxylulose-5-phosphate synthase) (dxp synthase) (dxps) [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378248|gb|EDT75782.1| 1-deoxy-d-xylulose-5-phosphate synthase [Clostridium butyricum 5521] gi|237655191|gb|EEP52749.1| 1-deoxy-d-xylulose-5-phosphate synthase (1-deoxyxylulose-5-phosphate synthase) (dxp synthase) (dxps) [Clostridium butyricum E4 str. BoNT E BL5262] Length = 586 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 8/106 (7%) Query: 123 SKIMAELTGRQGGISKGK-----GGSMHMFSTKNGFYG-GHGIVGAQVSLGTGIAFANKY 176 S I LTGR+ + G + +++ F+ GH VSL G+A A Sbjct: 74 SYIHKMLTGRRDAFINSEKYDDVSGYTNPHESEHDFFNIGH--TSTSVSLACGLAKARDL 131 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + + GDG+ + G+ YE N AA N+I ++ +N ++ Sbjct: 132 KDEKDNIIAIIGDGSLSGGEAYEGLNNAAEAGTNMIIIVNDNDMSI 177 >gi|160882849|ref|ZP_02063852.1| hypothetical protein BACOVA_00811 [Bacteroides ovatus ATCC 8483] gi|156111713|gb|EDO13458.1| hypothetical protein BACOVA_00811 [Bacteroides ovatus ATCC 8483] Length = 585 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 24/170 (14%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH VSL +G+A ++ + GDG+ + G+ +E + A Sbjct: 105 SEHDFFIIGH--TSTSVSLASGLAKGRDLTGGNENIIAVIGDGSLSGGEAFEGLDYVAEL 162 Query: 208 NLNVIYVIENNQYAMGTS------------VSRASAQTNFSKRGVSFNIPGMQV-DGMDI 254 N+I ++ +NQ ++ + S + NF K + + + V DG D+ Sbjct: 163 GTNMIIIVNDNQMSIAENHGGLYKNLKELRDSNGQCECNFFK---AMGLDYIYVNDGNDV 219 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEIN 302 +A + +A + + + PI++ + T + +G+ + D Y R N Sbjct: 220 QA----LIEAFSKVKDIQHPIVVHINTLKGKGYERAEQDKETYHWRTPFN 265 >gi|325523094|gb|EGD01498.1| transketolase domain-containing protein [Burkholderia sp. TJI49] Length = 293 Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 7/117 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +++G G+A + + S DG ++G +E+ AA L N+I +++ Sbjct: 127 GSLGQGLAIGVGMALGLRLKGSPAFVYNSMSDGELDEGATWEAALSAAHHRLGNLIAMVD 186 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 N Q A G S A + + SF +V+G DI A+ A D+ CRA K Sbjct: 187 INRQQADGAS-HDVLAFEPLADKFASFGWHVERVNGNDIAALVAAFDR----CRALK 238 >gi|317473753|ref|ZP_07933034.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides eggerthii 1_2_48FAA] gi|316910010|gb|EFV31683.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacteroides eggerthii 1_2_48FAA] Length = 589 Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH VSL G+A A + + GDG+ + G+ +E N AA Sbjct: 105 SEHDFFVIGH--TSTSVSLACGLAKARDLKGDTGNVIAVIGDGSLSGGEAFEGLNNAAEL 162 Query: 208 NLNVIYVIENNQYAM 222 N I ++ +NQ ++ Sbjct: 163 GTNFIVIVNDNQMSI 177 >gi|255326561|ref|ZP_05367640.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rothia mucilaginosa ATCC 25296] gi|255296373|gb|EET75711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rothia mucilaginosa ATCC 25296] Length = 690 Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%) Query: 169 GIAFANKYR-RSDKICVVCFGDGAANQGQVYESFN-IAALWNLNVIYVIENNQYAMGTSV 226 GI+ A+K D+ VV GDGA G +E+ N IAA V+ V+ +N + ++ Sbjct: 156 GISRAHKLNGEDDRYTVVLIGDGALTGGMAWEAVNNIAADRTRKVVIVVNDNGRSYAPTI 215 Query: 227 SRASAQTNFSKRGVSFNIPGMQVD 250 + Q + K GV + +++D Sbjct: 216 GGFANQLSELKHGVQQQVDRVRLD 239 >gi|254693217|ref|ZP_05155045.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 3 str. Tulya] gi|261213460|ref|ZP_05927741.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 3 str. Tulya] gi|260915067|gb|EEX81928.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 3 str. Tulya] Length = 643 Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|255690147|ref|ZP_05413822.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bacteroides finegoldii DSM 17565] gi|260624431|gb|EEX47302.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bacteroides finegoldii DSM 17565] Length = 585 Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust. Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 24/170 (14%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F GH VSL +G+A ++ + GDG+ + G+ +E + A Sbjct: 105 SEHDFFIIGH--TSTSVSLASGLAKGRDLTGGNENIIAVIGDGSLSGGEAFEGLDYVAEL 162 Query: 208 NLNVIYVIENNQYAMGTS------------VSRASAQTNFSKRGVSFNIPGMQV-DGMDI 254 N+I ++ +NQ ++ + S + NF K + + M V DG ++ Sbjct: 163 GTNMIIIVNDNQMSIAENHGGLYKNLKELRDSNGQCECNFFK---AMGLDYMYVNDGNNV 219 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEIN 302 +A + +A + + + PI++ + T + +G++ + D Y R N Sbjct: 220 QA----LIEAFSKIKDIQHPIVVHINTLKGKGYARAEQDKETYHWRTPFN 265 >gi|126737911|ref|ZP_01753641.1| transketolase [Roseobacter sp. SK209-2-6] gi|126721304|gb|EBA18008.1| transketolase [Roseobacter sp. SK209-2-6] Length = 721 Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 17/144 (11%) Query: 158 GIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLN 210 G +G ++ G A A + +R+ D V GDG +G E+ +A +L Sbjct: 172 GPLGQGIANAVGFAMAEEMQRAQYGRKIVDHHTYVIAGDGCLMEGISQEAIGLAGRHSLG 231 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV---DGMDIRAVKATMDKAVAY 267 + V+ +N S +TN +R F G QV DG D A+ D+A+ Sbjct: 232 KLIVLWDNNNITIDGTVELSDRTNQVQR---FKASGWQVIEIDGHDPVAI----DEALTA 284 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSD 291 + K P +I T+ GH+ D Sbjct: 285 AKKSKKPSMIACKTHIALGHAAQD 308 >gi|23501337|ref|NP_697464.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis 1330] gi|161618408|ref|YP_001592295.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis ATCC 23365] gi|254703788|ref|ZP_05165616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 3 str. 686] gi|261754435|ref|ZP_05998144.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 3 str. 686] gi|30315829|sp|Q8G292|DXS_BRUSU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|189027768|sp|A9M8W0|DXS_BRUC2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|23347228|gb|AAN29379.1| deoxyxylulose-5-phosphate synthase [Brucella suis 1330] gi|161335219|gb|ABX61524.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis ATCC 23365] gi|261744188|gb|EEY32114.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 3 str. 686] Length = 643 Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|313681071|ref|YP_004058810.1| transketolase [Oceanithermus profundus DSM 14977] gi|313153786|gb|ADR37637.1| Transketolase domain-containing protein [Oceanithermus profundus DSM 14977] Length = 302 Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 16/153 (10%) Query: 141 GGSMHMFSTKNGFYGGH----GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 GG++ M ++ GH G +G +S GIA + + V DG GQ Sbjct: 122 GGTVEMIGAEHS--PGHELMAGSLGQALSQVIGIALGRRRKGETGRNFVFMSDGEFMIGQ 179 Query: 197 VYESFNIAALWNL-NVI-YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 +E+ + + L NVI YV N Q A G + +R +F ++VDG D+ Sbjct: 180 TWEAMETLSFYELDNVIAYVDANGQSADG-KIDEVMGIEPLKERLEAFGAVAVEVDGHDV 238 Query: 255 RAVKATMDKAVAYCRAHKG-PIIIEMLTYRYRG 286 A+ A + H+G P+++ T Y G Sbjct: 239 EALAAAAET------PHEGKPLVVIARTNPYCG 265 >gi|332558393|ref|ZP_08412715.1| transketolase [Rhodobacter sphaeroides WS8N] gi|332276105|gb|EGJ21420.1| transketolase [Rhodobacter sphaeroides WS8N] Length = 672 Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 13/142 (9%) Query: 158 GIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLN 210 G +G +++ G A A + R+ D GDG +G E+ +A L+ Sbjct: 124 GPLGQGLAMSVGFAMAEESLRARWGAKIIDHYTYCIAGDGCLMEGVSQEAIGLAGRHELS 183 Query: 211 -VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 +I + +NN + VS S +T+ R + + DG D A +D+A+ + Sbjct: 184 HLIVMWDNNGITIDGKVS-LSDRTDQKARFAAAGWDVFECDGHD----PADIDRALTAAK 238 Query: 270 AHKGPIIIEMLTYRYRGHSMSD 291 A KGP I T+ G S D Sbjct: 239 ASKGPAFIACTTHIALGSSAQD 260 >gi|254709584|ref|ZP_05171395.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis B2/94] gi|256031076|ref|ZP_05444690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis M292/94/1] gi|261317112|ref|ZP_05956309.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis B2/94] gi|265988149|ref|ZP_06100706.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis M292/94/1] gi|261296335|gb|EEX99831.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis B2/94] gi|264660346|gb|EEZ30607.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis M292/94/1] Length = 643 Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|148560626|ref|YP_001258456.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ovis ATCC 25840] gi|166198603|sp|A5VP09|DXS_BRUO2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|148371883|gb|ABQ61862.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ovis ATCC 25840] Length = 643 Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|50120300|ref|YP_049467.1| 2-oxoglutarate dehydrogenase E1 component [Pectobacterium atrosepticum SCRI1043] gi|49610826|emb|CAG74271.1| 2-oxoglutarate dehydrogenase E1 component [Pectobacterium atrosepticum SCRI1043] Length = 935 Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 5/156 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A + QG V E N++ + V + ++ NN+ TS T + + Sbjct: 352 LPITIHGDAAISGQGVVQELLNMSTVRGYEVGGTLRIVINNRIGFTTSNPLDIRSTEYCT 411 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 G P V+ D AV A+ + A K + I+++ YR GH+ +D + Sbjct: 412 DVGKMVQAPIFHVNADDPEAVAFVTRLALDFRNAFKRDVFIDLICYRRHGHNEADEPSAT 471 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +++ + P + RL K ++ D E+ Sbjct: 472 QPMMYQKIKKHPTPRKVYADRLEQEKTITQEDATEM 507 >gi|306845065|ref|ZP_07477645.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. BO1] gi|306274480|gb|EFM56275.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. BO1] Length = 643 Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|167386484|ref|XP_001737773.1| transketolase [Entamoeba dispar SAW760] gi|165899225|gb|EDR25864.1| transketolase, putative [Entamoeba dispar SAW760] Length = 661 Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust. Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 14/130 (10%) Query: 158 GIVGAQVSLGTGIAFANKY----------RRSDKICVVCFGDGAANQGQVYESFNIAALW 207 G +GA +S G G+A A K+ + D V GDG +G E+ ++A Sbjct: 114 GPLGAGMSTGVGLAIAEKHMGAIFNTKDKKIIDNYTYVLLGDGCLMEGVTAEAASLAGHM 173 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 LN + + ++ + + + + KR ++N ++ +G +++ + D A+ Sbjct: 174 KLNKLICLYDDNHITIDGNTNLTFTEDVKKRFEAYNWNVLKCNGDEVKEI----DAALVL 229 Query: 268 CRAHKGPIII 277 +A P +I Sbjct: 230 AKASDKPTLI 239 >gi|305432463|ref|ZP_07401625.1| transketolase [Campylobacter coli JV20] gi|304444502|gb|EFM37153.1| transketolase [Campylobacter coli JV20] Length = 632 Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 21/132 (15%) Query: 158 GIVGAQVSLGTGIAFANKYRRS--------DKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G ++ G A A K ++ K+ +C GDG +G YE+ ++A L L Sbjct: 114 GPLGQGIANAVGFAMAAKKAQNLLGKELINHKVYCLC-GDGDLQEGISYEACSLAGLHKL 172 Query: 210 -NVIYVIENNQYAMGTSVSRA---SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 N+I + ++N+ ++ VS A + F +G + +DG D A+ DKA+ Sbjct: 173 DNLIIIYDSNEISIEGDVSLAFNEDVKMRFESQGFEV----LSIDGHDYEAI----DKAL 224 Query: 266 AYCRAHKGPIII 277 + P +I Sbjct: 225 KQAKKANKPCLI 236 >gi|260566959|ref|ZP_05837429.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 4 str. 40] gi|260156477|gb|EEW91557.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 4 str. 40] Length = 643 Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|256060570|ref|ZP_05450738.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella neotomae 5K33] gi|261324565|ref|ZP_05963762.1| 1-deoxyxylulose-5-phosphate synthase [Brucella neotomae 5K33] gi|261300545|gb|EEY04042.1| 1-deoxyxylulose-5-phosphate synthase [Brucella neotomae 5K33] Length = 643 Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|225626944|ref|ZP_03784983.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ceti str. Cudo] gi|254701241|ref|ZP_05163069.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 5 str. 513] gi|254713000|ref|ZP_05174811.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ceti M644/93/1] gi|254716646|ref|ZP_05178457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ceti M13/05/1] gi|254718614|ref|ZP_05180425.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. 83/13] gi|256254479|ref|ZP_05460015.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ceti B1/94] gi|256368891|ref|YP_003106397.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella microti CCM 4915] gi|260168207|ref|ZP_05755018.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. F5/99] gi|261218447|ref|ZP_05932728.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M13/05/1] gi|261221652|ref|ZP_05935933.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti B1/94] gi|261320703|ref|ZP_05959900.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M644/93/1] gi|261751780|ref|ZP_05995489.1| 1-deoxyxylulose-5-phosphate synthase [Brucella suis bv. 5 str. 513] gi|261757668|ref|ZP_06001377.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. F5/99] gi|265983591|ref|ZP_06096326.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. 83/13] gi|306839868|ref|ZP_07472666.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NF 2653] gi|306842279|ref|ZP_07474941.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. BO2] gi|225618601|gb|EEH15644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ceti str. Cudo] gi|255999049|gb|ACU47448.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella microti CCM 4915] gi|260920236|gb|EEX86889.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti B1/94] gi|260923536|gb|EEX90104.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M13/05/1] gi|261293393|gb|EEX96889.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M644/93/1] gi|261737652|gb|EEY25648.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. F5/99] gi|261741533|gb|EEY29459.1| 1-deoxyxylulose-5-phosphate synthase [Brucella suis bv. 5 str. 513] gi|264662183|gb|EEZ32444.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. 83/13] gi|306287587|gb|EFM59038.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. BO2] gi|306405054|gb|EFM61335.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NF 2653] Length = 643 Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|87302729|ref|ZP_01085540.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. WH 5701] gi|87282612|gb|EAQ74570.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. WH 5701] Length = 637 Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYV 214 G G +S G+A A R + CV GDGA G E+ N A L ++ V Sbjct: 111 GAGHASTSISAALGMALARDRRGEEFKCVAVIGDGALTGGMALEAINHAGHLPRTPLLVV 170 Query: 215 IENNQYAMGTSVSRASAQTN 234 + +N ++ V S N Sbjct: 171 LNDNDMSISPPVGALSTYLN 190 >gi|304558608|gb|ADM41272.1| Transketolase (TK) [Edwardsiella tarda FL6-60] Length = 282 Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 7/100 (7%) Query: 165 SLGTGIAFANKY-----RRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVIEN 217 SLG G++ AN R+ K V C GDG +GQV+E+ AA + L NV +++N Sbjct: 117 SLGQGLSIANGIAMGLRRQGIKRRVYCLLGDGELQEGQVWEAALSAAHYGLSNVCAIVDN 176 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 N + + + + + +F + V+G + A+ Sbjct: 177 NHVQLDGATAEVKGVEPVADKWRAFGWNVLCVEGHSLSAL 216 >gi|300114036|ref|YP_003760611.1| deoxyxylulose-5-phosphate synthase [Nitrosococcus watsonii C-113] gi|299539973|gb|ADJ28290.1| deoxyxylulose-5-phosphate synthase [Nitrosococcus watsonii C-113] Length = 641 Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust. Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 4/107 (3%) Query: 129 LTGRQG--GISKGKGGSMHMFSTKNGFYGGHGI--VGAQVSLGTGIAFANKYRRSDKICV 184 LTGR+ G + GG S Y G+ +S G+A A + + ++ V Sbjct: 87 LTGRRERLGTIRQAGGLAPFPSRHESPYDTFGVGHSSTSISAALGMAIAAREKGENRKTV 146 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 GDG G YE+ + A +++ ++ +N+ ++ +V S+ Sbjct: 147 AIIGDGGVTAGMAYEALDHAGALGADLLVILNDNEMSISPNVGAISS 193 >gi|294851814|ref|ZP_06792487.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NVSL 07-0026] gi|294820403|gb|EFG37402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NVSL 07-0026] Length = 643 Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|256112956|ref|ZP_05453864.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis bv. 3 str. Ether] gi|265994395|ref|ZP_06106952.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 3 str. Ether] gi|262765508|gb|EEZ11297.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 3 str. Ether] Length = 643 Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|51892980|ref|YP_075671.1| 1-deoxy-D-xylulose-5-phosphate synthase [Symbiobacterium thermophilum IAM 14863] gi|81388735|sp|Q67NB6|DXS_SYMTH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|51856669|dbj|BAD40827.1| 1-deoxy-xylulose 5-phosphate synthase [Symbiobacterium thermophilum IAM 14863] Length = 648 Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 2/96 (2%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 S + F+ GH +S G+A A D V GDGA G YE+ + A Sbjct: 105 SVHDHFHWGHA--STSISAAVGMAKARDLAGDDYEVVAVIGDGALTGGMAYEALDHAGHD 162 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 VI V+ +N ++ +V S + G S+ Sbjct: 163 KTKVIVVLNDNSMSIAPNVGGISNYLARIRTGPSYQ 198 >gi|293604270|ref|ZP_06686677.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter piechaudii ATCC 43553] gi|292817147|gb|EFF76221.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter piechaudii ATCC 43553] Length = 622 Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 7/102 (6%) Query: 126 MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVV 185 MA+L +QGGIS G S + F H +LG +A N + I ++ Sbjct: 90 MAQLR-QQGGIS---GFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGVQRQHIAII 145 Query: 186 CFGDGAANQGQVYESFNIAALW-NLNVIYVIENNQYAMGTSV 226 GDGA + G +E+ N A + N+N++ ++ +N ++ V Sbjct: 146 --GDGAMSAGMAFEAMNNAGVTPNINLLVILNDNDMSISPPV 185 >gi|237747172|ref|ZP_04577652.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes HOxBLS] gi|229378523|gb|EEO28614.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes HOxBLS] Length = 615 Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust. Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN-LNVIYVIENNQYAM 222 +S G+A A + + + + GDGA G +E+ N ++N +N++ ++ +N ++ Sbjct: 120 ISAALGMALAARLKNENYTSIAVIGDGAITGGMAFEAMNNVGMYNDINLLVILNDNDMSI 179 Query: 223 GTSV 226 +V Sbjct: 180 SPAV 183 >gi|167770734|ref|ZP_02442787.1| hypothetical protein ANACOL_02080 [Anaerotruncus colihominis DSM 17241] gi|167667329|gb|EDS11459.1| hypothetical protein ANACOL_02080 [Anaerotruncus colihominis DSM 17241] Length = 620 Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 14/135 (10%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 R+GG+S G S + F GH +S G+A A + GDGA Sbjct: 97 REGGLS---GFPRPRESRSDAFIAGHA--STSLSAACGLAKAKTLTGDPHHVIAVAGDGA 151 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV---------SRASAQTNFSKRGVSF 242 G +YE+ N A ++I ++ +N ++ SV R+S + N K V Sbjct: 152 FTGGMIYEALNNAGRSRDHLIVILNDNDMSISKSVGSFARYLAAKRSSERYNVIKEHVEK 211 Query: 243 NIPGMQVDGMDIRAV 257 + + + G ++R V Sbjct: 212 AVRKIPLVGGELRNV 226 >gi|323952716|gb|EGB48584.1| oxoglutarate dehydrogenase [Escherichia coli H252] Length = 765 Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 5/156 (3%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A QG V E+ N++ V + ++ NNQ TS + T + + Sbjct: 182 LPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCT 241 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 G P V+ D AV A+ + K + I+++ YR GH+ +D + Sbjct: 242 DIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSAT 301 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +++ + P + +L K A+ D E+ Sbjct: 302 QPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEM 337 >gi|323135714|ref|ZP_08070797.1| deoxyxylulose-5-phosphate synthase [Methylocystis sp. ATCC 49242] gi|322398805|gb|EFY01324.1| deoxyxylulose-5-phosphate synthase [Methylocystis sp. ATCC 49242] Length = 642 Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 129 LTGRQGGISKGK-GGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 +TGR+ I + GG + F+ + + F GH +S G G+A A + Sbjct: 86 ITGRRDRIRTLRMGGGLSGFTKRAESEYDAFGAGHS--STSISAGLGMAVARDLAGGNNH 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 V GD + + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VVAVIGDSSMSAGMAYEALNNAGALDSRLIVILNDNDMSIAPPTGAMSA 192 >gi|291550250|emb|CBL26512.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruminococcus torques L2-14] Length = 476 Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 8/112 (7%) Query: 129 LTGRQGGISK-GKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ G K G M F + + F GH +S G G A + ++ Sbjct: 80 LTGRKEGFDDLRKYGGMSGFPKRKESKCDAFDTGHS--STSISAGLGYVAARELQQEHYN 137 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 V GDG+ G YE+ N A+ N I V+ +N ++ +V S N Sbjct: 138 VVSVIGDGSMTGGMAYEALNNASRLKSNFIIVLNDNTMSISKNVGGMSNYLN 189 >gi|257486134|ref|ZP_05640175.1| transketolase, N-terminal subunit [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330888372|gb|EGH21033.1| transketolase [Pseudomonas syringae pv. mori str. 301020] gi|331010467|gb|EGH90523.1| transketolase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 278 Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust. Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 1/107 (0%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI-E 216 G +G + + G+A A K S K V GDG +G +E+ AA + L+ ++VI + Sbjct: 121 GALGHGLPVAVGLALAAKMSGSTKRIYVLTGDGELAEGSNWEAAMAAAKYGLDNLFVIVD 180 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 N+ + + ++ +F + DG D+ + +++ Sbjct: 181 KNKLQLAGLTAEIMPLDPLDEKWAAFGFTVSECDGNDVGQLVTALEQ 227 >gi|183983776|ref|YP_001852067.1| pyruvate:ferredoxin oxidoreductase PorB, beta subunit [Mycobacterium marinum M] gi|183177102|gb|ACC42212.1| pyruvate:ferredoxin oxidoreductase PorB, beta subunit [Mycobacterium marinum M] Length = 363 Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 17/140 (12%) Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ-------GQVYESFNIAAL 206 YG H I G ++ TG+A A R D V GDG A + + NI L Sbjct: 91 YGFHSIHGRAPAIATGLALA----REDLSVWVVTGDGDALSIGGNHLIHALRRNVNITIL 146 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD------GMDIRAVKAT 260 N IY + QY+ + V + + T FN + + G + + +A Sbjct: 147 LFNNRIYGLTKGQYSPTSEVGKVTKSTPMGSLDTPFNPVSLALGAEATFVGRALDSDRAG 206 Query: 261 MDKAVAYCRAHKGPIIIEML 280 + + + H+G ++E+L Sbjct: 207 LSEVLRAATEHRGAALVEIL 226 >gi|17987781|ref|NP_540415.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis bv. 1 str. 16M] gi|225851972|ref|YP_002732205.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis ATCC 23457] gi|256264520|ref|ZP_05467052.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 2 str. 63/9] gi|260563510|ref|ZP_05833996.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1 str. 16M] gi|21263517|sp|Q8YFM2|DXS_BRUME RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|254782063|sp|C0RHE3|DXS_BRUMB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|17983505|gb|AAL52679.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1 str. 16M] gi|225640337|gb|ACO00251.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis ATCC 23457] gi|260153526|gb|EEW88618.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1 str. 16M] gi|263094853|gb|EEZ18591.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 2 str. 63/9] gi|326408468|gb|ADZ65533.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M28] gi|326538185|gb|ADZ86400.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M5-90] Length = 643 Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|329120247|ref|ZP_08248915.1| 2-oxoglutarate dehydrogenase E1 component [Neisseria bacilliformis ATCC BAA-1200] gi|327462588|gb|EGF08911.1| 2-oxoglutarate dehydrogenase E1 component [Neisseria bacilliformis ATCC BAA-1200] Length = 942 Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust. Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 211 VIYVIENNQYAMGTSVSRASAQ----TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 ++++ NNQ TS +R + T+ SK + P V+ D AV M A+ Sbjct: 384 TVHIVVNNQIGFTTSDTRDTRSAVYCTDISKM---VDAPVFHVNADDPEAVCFVMQAAMD 440 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSD 291 Y + ++++++ YR GH+ SD Sbjct: 441 YRKTFHKDVVVDVVCYRKNGHNESD 465 >gi|312129930|ref|YP_003997270.1| transketolase domaiN-containing protein [Leadbetterella byssophila DSM 17132] gi|311906476|gb|ADQ16917.1| Transketolase domain-containing protein [Leadbetterella byssophila DSM 17132] Length = 288 Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust. Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 2/109 (1%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE 216 G +G +S+ G A K + + V GDG +GQ++E+ A+ + N++ +I+ Sbjct: 125 GSLGQGLSVAIGAALGKKLEQDPRTVYVLMGDGEQQEGQIWEAAQFASHHKVDNLVGIID 184 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKA 264 N + + A + + +F M++ +G ++ A A + KA Sbjct: 185 LNFQQIDGPTEKVMANRDLKAKYKAFGWNVMEIKEGNNMEACVAGLRKA 233 >gi|153799538|gb|ABS50520.1| 1-deoxy-D-xylulose 5-phosphate synthase type II [Picea abies] Length = 746 Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 14/100 (14%) Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYG---------GHGIVGAQVSLGTGIAFANKYRRS 179 LTGR + K G+M S GF G G +S G+A Sbjct: 173 LTGR-----RSKMGTMRQTSGLAGFPRRVESEHDAFGVGHSSTSISAAIGMAVGRDLLGK 227 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 + GDGA GQ YE+ N A + N+I ++ +N+ Sbjct: 228 HNHVIAVIGDGAMTAGQAYEALNNAGFLDSNMIIILNDNK 267 >gi|113474565|ref|YP_720626.1| transketolase-like [Trichodesmium erythraeum IMS101] gi|110165613|gb|ABG50153.1| Transketolase-like [Trichodesmium erythraeum IMS101] Length = 636 Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 10/110 (9%) Query: 169 GIAFANKYRRSDKICVVCFG-DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+A AN + V C G DG+ +G E+ +A NLN+ +I++N + S Sbjct: 154 GVAMANPNK-----AVFCLGSDGSQQEGNDAEAARMAVAQNLNIKLLIDDNDVTIAGHPS 208 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 + +K I ++ DG D+ ++ M +AV GPI I Sbjct: 209 NYLKGYDLNKTLTGHGIKVLEGDGEDLDSLYQRMCQAVTTA----GPIAI 254 >gi|300867681|ref|ZP_07112326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria sp. PCC 6506] gi|300334264|emb|CBN57498.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria sp. PCC 6506] Length = 635 Score = 36.2 bits (82), Expect = 9.3, Method: Compositional matrix adjust. Identities = 48/227 (21%), Positives = 83/227 (36%), Gaps = 67/227 (29%) Query: 139 GKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 G+ H K+G G G G +S G G+A A + + V Sbjct: 82 GRYDRFHTLRQKDGVAGYLKRCESKFDHFGAGHASTSISAGLGMALARDMKGENFKVVAV 141 Query: 187 FGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVS---------RASAQTNFS 236 GDGA G E+ N A L N++ V+ +N+ ++ +V R SA F Sbjct: 142 IGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPNVGAIPRYLNKMRLSAPVQFL 201 Query: 237 KRGVS---FNIP---------------GMQ---------------------VDGMDIRAV 257 K + +IP GM+ VDG ++ + Sbjct: 202 KDNLEEQFKHIPFVGETFTPEMERLKEGMKRLAVPKVGAVIEELGFTYMGPVDGHNLEEL 261 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANYRTREEIN 302 AT +A +GP+++ ++T + +G++++ D Y + N Sbjct: 262 IATFKQA----HTIQGPVLVHVVTVKGKGYAIAEKDQVGYHAQNPFN 304 >gi|256044153|ref|ZP_05447060.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis bv. 1 str. Rev.1] gi|265990565|ref|ZP_06103122.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1 str. Rev.1] gi|263001349|gb|EEZ13924.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1 str. Rev.1] Length = 643 Score = 36.2 bits (82), Expect = 9.3, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|110633092|ref|YP_673300.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium sp. BNC1] gi|118595588|sp|Q11KE0|DXS_MESSB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|110284076|gb|ABG62135.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chelativorans sp. BNC1] Length = 650 Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust. Identities = 16/59 (27%), Positives = 30/59 (50%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 +S G G+A A + + + GDGA + G YE+ N A + +I ++ +N ++ Sbjct: 139 ISAGLGMAVARELSGGQRHVIAVIGDGALSAGMAYEAMNNAGALDARLIVILNDNDMSI 197 >gi|124023239|ref|YP_001017546.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus str. MIT 9303] gi|166201525|sp|A2C9X1|DXS_PROM3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|123963525|gb|ABM78281.1| 1-deoxy-D-xylulose 5-phosphate synthase [Prochlorococcus marinus str. MIT 9303] Length = 644 Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 3/88 (3%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-L 206 S+ + F GH +S G+A A + R CV GDGA G E+ N A + Sbjct: 105 SSFDHFGAGHA--STSISAALGMAVARERRGESFKCVAVIGDGALTGGIALEAINHAGHM 162 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTN 234 N + V+ +N ++ V S N Sbjct: 163 PNTPFLVVLNDNDMSISPPVGALSTHLN 190 >gi|332531500|ref|ZP_08407402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hylemonella gracilis ATCC 19624] gi|332039052|gb|EGI75476.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hylemonella gracilis ATCC 19624] Length = 641 Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 14/107 (13%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS G + S + F H +S G+A A + + Sbjct: 83 LTGRRERMGSLRQLGGIS---GFPLRSESAYDVFGTAHS--STSISAALGMALAARQKGE 137 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 D+ + GDGA G +E+ N + + ++ ++ +N ++ V Sbjct: 138 DRHAIAVIGDGAMTAGMAFEALNHGGVEDCRLLVILNDNDMSISPPV 184 >gi|320581921|gb|EFW96140.1| pyruvate decarboxylase [Pichia angusta DL-1] Length = 571 Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 11/131 (8%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGG--------HGIVGAQVSLGTGIAFANKYRRSDKIC 183 R G + + G+ T+ F G G +G + TG FA + ++ C Sbjct: 387 RSGDVLVTETGTSSFGVTQTHFPGNITAISQVLWGSIGYSLPSATGAQFALEEIDPNRRC 446 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLN-VIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 ++ GDG+ +S + WNL ++V+ NN Y + + AQ N ++ F Sbjct: 447 ILFIGDGSLQ--LTVQSISDICRWNLKPYLFVLNNNGYTIEKLIHGPQAQYNMIQKWDHF 504 Query: 243 NIPGMQVDGMD 253 I + D +D Sbjct: 505 KILELFHDKVD 515 >gi|295688781|ref|YP_003592474.1| deoxyxylulose-5-phosphate synthase [Caulobacter segnis ATCC 21756] gi|295430684|gb|ADG09856.1| deoxyxylulose-5-phosphate synthase [Caulobacter segnis ATCC 21756] Length = 640 Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-NGFYGGHGIVGAQVSLGTGIAF--ANKYRRSDKICV 184 LTGR+ I + +GG + F+ + Y G A S+ + F A + D V Sbjct: 85 LTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAHAATSISAALGFCAARDAKGEDNSVV 144 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 GDG+ G YE+ N A +I ++ +N ++ V SA Sbjct: 145 AVIGDGSLGAGMAYEAMNAATDTTKRLIVILNDNDMSIAPPVGGMSA 191 >gi|238765256|ref|ZP_04626185.1| 2-oxoglutarate dehydrogenase E1 component [Yersinia kristensenii ATCC 33638] gi|238696528|gb|EEP89316.1| 2-oxoglutarate dehydrogenase E1 component [Yersinia kristensenii ATCC 33638] Length = 936 Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 5/156 (3%) Query: 182 ICVVCFGDGA-ANQGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNF-S 236 + + GD A A QG V E+ N++ V + ++ NNQ TS + T + + Sbjct: 353 LPITIHGDAAIAGQGVVQETLNMSQARGYEVGGTVRIVINNQIGFTTSNPLDARSTQYCT 412 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYR 296 P V+ D AV A+ + K ++I+++ YR GH+ +D + Sbjct: 413 DIAKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEADEPSAT 472 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 +++ + P + +L+ AS D E+ Sbjct: 473 QPVMYQKIKKHPTPRKIYADKLVEQNIASLEDATEM 508 >gi|261343504|ref|ZP_05971149.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Providencia rustigianii DSM 4541] gi|282568650|gb|EFB74185.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component [Providencia rustigianii DSM 4541] Length = 935 Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 5/115 (4%) Query: 182 ICVVCFGDGAAN-QGQVYESFNIAALWNLNV---IYVIENNQYAMGTSVSRASAQTNFSK 237 + + GD A QG V E+ N++ V + ++ NNQ TS + + T + Sbjct: 352 LPITIHGDSAVTGQGVVQETLNMSQARGYEVGGTMRIVINNQVGFTTSNPKDTRSTEYCT 411 Query: 238 RGVSF-NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 V P V+ D AV A+ + K ++++++ YR GH+ +D Sbjct: 412 DIVKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVMVDLVCYRRHGHNEAD 466 >gi|319406941|emb|CBI80578.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. 1-1C] Length = 640 Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 15/114 (13%) Query: 129 LTGR---------QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR +GG+S G + S + F GH +S G G+A + Sbjct: 86 LTGRRDRIRTLRQEGGLS---GFTKRSESVYDPFGAGHS--STSISAGLGMAMVSALEAE 140 Query: 180 DKICVV-CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 +K ++ GDGA + G YE+ N A + +I ++ +N ++ SA Sbjct: 141 EKRNIISVIGDGAISAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAH 194 >gi|219114431|ref|XP_002176386.1| precursor of synthase DXS 1-deoxy-d-xylulose-5-phosphate synthase [Phaeodactylum tricornutum CCAP 1055/1] gi|217402632|gb|EEC42622.1| precursor of synthase DXS 1-deoxy-d-xylulose-5-phosphate synthase [Phaeodactylum tricornutum CCAP 1055/1] Length = 730 Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 14/111 (12%) Query: 129 LTGRQ---------GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 LTGR+ GGIS G S + F GH V+ G I + +R Sbjct: 133 LTGRRDRMSTLRQSGGIS---GFCKRKESEYDSFGAGHSSTSISVAQGMSIGKSILNKRQ 189 Query: 180 DKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVSRA 229 + C+ GDGA G YE+ N A L N ++ + +N Q ++ T A Sbjct: 190 NN-CIAVIGDGAITGGMAYEAMNSAGYLKNRMIVILNDNGQVSLPTGTPSA 239 >gi|220909494|ref|YP_002484805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. PCC 7425] gi|254782069|sp|B8HWL8|DXS_CYAP4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|219866105|gb|ACL46444.1| deoxyxylulose-5-phosphate synthase [Cyanothece sp. PCC 7425] Length = 632 Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust. Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 16/197 (8%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TE 101 E++ N+ LS L + R+ +K L + GG +G + +G+ +L + Sbjct: 5 EITHPNQLHGLSIQELKQIARQIRDK--HLETVAATGGHLGPGLGVVELTLGLYQTLDLD 62 Query: 102 GDQMI--TAYREHGHILACG-VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 D++I ++ + H L G D + + G G +++ + S + F GH Sbjct: 63 RDRVIWDVGHQAYPHKLLTGRYDRFHTLRQKDGVAGYLNRKE-------SEFDHFGAGHA 115 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-LWNLNVIYVIEN 217 +S G+A A R V GDGA G E+ N A L + N++ V+ + Sbjct: 116 --STSISAALGMALARDQRGETHKVVAIIGDGALTGGMSLEAINHAGHLPHTNLMVVLND 173 Query: 218 NQYAMGTSVSRASAQTN 234 N+ ++ +V S N Sbjct: 174 NEMSISPNVGALSRYLN 190 >gi|114706808|ref|ZP_01439708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fulvimarina pelagi HTCC2506] gi|114537756|gb|EAU40880.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fulvimarina pelagi HTCC2506] Length = 635 Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 5/91 (5%) Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 ++GG+S G + S + F GH +S G G+A A + V GDGA Sbjct: 95 QEGGLS---GFAKRTESEYDPFGAGHS--STSISAGLGMAVARDLAGAKNNVVSVIGDGA 149 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 + G YE+ N A + +I ++ +N ++ Sbjct: 150 MSAGMAYEAMNNAGALDARLIVILNDNDMSI 180 >gi|33862957|ref|NP_894517.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus str. MIT 9313] gi|41016948|sp|Q7V7Q3|DXS_PROMM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|33634874|emb|CAE20860.1| 1-deoxy-D-xylulose 5-phosphate synthase [Prochlorococcus marinus str. MIT 9313] Length = 644 Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 3/88 (3%) Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA-L 206 S+ + F GH +S G+A A + R CV GDGA G E+ N A + Sbjct: 105 SSFDHFGAGHA--STSISAALGMAVARERRGESFKCVAVIGDGALTGGIALEAINHAGHM 162 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTN 234 N + V+ +N ++ V S N Sbjct: 163 PNTPFLVVLNDNDMSISPPVGALSTHLN 190 >gi|283784559|ref|YP_003364424.1| hypothetical protein ROD_08001 [Citrobacter rodentium ICC168] gi|282948013|emb|CBG87577.1| conserved hypothetical protein [Citrobacter rodentium ICC168] Length = 281 Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 93/233 (39%), Gaps = 29/233 (12%) Query: 62 IRRFEEKAGQLYGMGMVG-----------GFCHLCI--GQEAVIVGMKMSLTEGDQMITA 108 IRR+ + G++ G G +G F H Q+A G L A Sbjct: 16 IRRYALRMGEVQGQGYIGQALGYADVLATAFSHAMTWRAQDAEWEGRDRFLLSHGHYAIA 75 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 Y + +L G+ AEL S+ M ++ GG +G +S+ Sbjct: 76 Y--YAALLEAGIIPE---AELETYGSDDSRLPMSGMATYTPGMEMSGGS--LGQGLSIAV 128 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL-NVIYVIE-NNQYAMGTSV 226 GIA + ++S DG ++G +E+ AA + L N+I +++ N Q A G S Sbjct: 129 GIALGLRQKQSPSWVYNSMSDGELDEGSTWEAAMSAAHYGLTNLINIVDVNRQQADGDS- 187 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG--PIII 277 + ++ +F ++DG D+ AV D A + H+G P +I Sbjct: 188 RKILGFEPLHEKWAAFGWYVQRIDGNDVAAVVNAFDNA----KNHRGEQPRVI 236 >gi|256159140|ref|ZP_05456961.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ceti M490/95/1] gi|265997614|ref|ZP_06110171.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M490/95/1] gi|262552082|gb|EEZ08072.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M490/95/1] Length = 646 Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|163842716|ref|YP_001627120.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis ATCC 23445] gi|189027769|sp|B0CKC0|DXS_BRUSI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|163673439|gb|ABY37550.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis ATCC 23445] Length = 643 Score = 35.8 bits (81), Expect = 9.8, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 129 LTGRQGGI-SKGKGGSMHMFSTK-----NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 LTGR+ I + + G + F+ + + F H +S G G+A A++ + Sbjct: 86 LTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHS--STSISAGLGMAVASELSGEKRN 143 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 + GDG+ + G YE+ N A + +I ++ +N ++ SA Sbjct: 144 VIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSA 192 >gi|57168795|ref|ZP_00367926.1| transketolase [Campylobacter coli RM2228] gi|57019842|gb|EAL56525.1| transketolase [Campylobacter coli RM2228] Length = 613 Score = 35.8 bits (81), Expect = 9.8, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 21/132 (15%) Query: 158 GIVGAQVSLGTGIAFANKYRRS--------DKICVVCFGDGAANQGQVYESFNIAALWNL 209 G +G ++ G A A K ++ K+ +C GDG +G YE+ ++A L L Sbjct: 95 GPLGQGIANAVGFAMAAKKAQNLLGKELINHKVYCLC-GDGDLQEGISYEACSLAGLHKL 153 Query: 210 -NVIYVIENNQYAMGTSVSRA---SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 N+I + ++N+ ++ VS A + F +G + +DG D A+ DKA+ Sbjct: 154 DNLIIIYDSNEISIEGDVSLAFNEDVKMRFESQGFEV----LSIDGHDYEAI----DKAL 205 Query: 266 AYCRAHKGPIII 277 + P +I Sbjct: 206 KQAKKANKPCLI 217 >gi|327264301|ref|XP_003216952.1| PREDICTED: transketolase-like protein 2-like [Anolis carolinensis] Length = 626 Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 8/142 (5%) Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCF-GDGAANQGQVYESFNIAALWNL-NVIYVI 215 G +G + G+A+ KY V C GDG +++G V+E+ + L N++ + Sbjct: 124 GSLGQGLGAACGMAYTGKYFDKASYRVYCLMGDGESSEGSVWEALQFGFHYKLDNLVAIF 183 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG-P 274 + N+ + + KR +F VDG ++ + +A+ KG P Sbjct: 184 DVNRLGQSEAAPLKHDTDMYRKRCEAFGWNTYVVDGHNVE----ELCRALWQASQQKGKP 239 Query: 275 IIIEMLTYRYRGHS-MSDPANY 295 I T++ RG S + D N+ Sbjct: 240 TAIVAKTFKGRGISGVEDADNW 261 >gi|183206797|gb|ACC54557.1| putative 1-D-deoxyxylulose 5-phosphate synthase type 1 [Pinus densiflora] Length = 707 Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 31/64 (48%) Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 G G +S G G+A + + + GDGA GQ +E+ N A + N+I ++ Sbjct: 176 GAGHSSTSISAGLGMAAGRDLKGKNNHVISVIGDGAMTAGQAFEAMNNARYLDSNMIVIL 235 Query: 216 ENNQ 219 +N+ Sbjct: 236 NDNK 239 >gi|87124420|ref|ZP_01080269.1| deoxyxylulose-5-phosphate synthase [Synechococcus sp. RS9917] gi|86167992|gb|EAQ69250.1| deoxyxylulose-5-phosphate synthase [Synechococcus sp. RS9917] Length = 648 Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 39/109 (35%), Gaps = 13/109 (11%) Query: 139 GKGGSMHMFSTKNGFYG------------GHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 G+ G H + G G G G +S G+A A R CV Sbjct: 82 GRYGDFHTLRQQGGVAGYLKRCESDFDHFGAGHASTSISAALGMAIARDRRGEQFKCVAV 141 Query: 187 FGDGAANQGQVYESFNIAA-LWNLNVIYVIENNQYAMGTSVSRASAQTN 234 GDGA G E+ N A L + + V+ +N ++ V S N Sbjct: 142 IGDGALTGGMALEAINHAGHLPHTPFVVVLNDNDMSISPPVGALSTYLN 190 >gi|300722009|ref|YP_003711289.1| 1-deoxy-D-xylulose 5-phosphate synthase [Xenorhabdus nematophila ATCC 19061] gi|297628506|emb|CBJ89073.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein, thiamin-binding [Xenorhabdus nematophila ATCC 19061] Length = 621 Score = 35.8 bits (81), Expect = 10.0, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 58/218 (26%) Query: 129 LTGRQGGIS--KGKGGSMHMF-----STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 LTGR+ I + K G +H F S + GH LG IA + + Sbjct: 88 LTGRRDRIDTIRQKNG-LHPFPWREESEYDTLCVGHSSTSISAGLGMAIAAEREGKGRKT 146 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS---AQTNFSK- 237 +CV+ GDGA G +E+ N A + +++ ++ +N+ ++ +V + AQ K Sbjct: 147 VCVI--GDGAITAGMAFEAMNHAGDIDPDMLVILNDNEMSISENVGALNNHLAQLLSGKL 204 Query: 238 --------RGVSFNIPGMQ------------------------------VDGMDIRAVKA 259 + V N+P ++ VDG D+ A+ Sbjct: 205 YTTLREGGKKVFSNLPPIKELLKKTEEHLKGMVVPGTLFEELGFNYIGPVDGHDVLALTQ 264 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS--DPANY 295 T+ R KGP + ++T + RG++ + DP ++ Sbjct: 265 TLKN----MRELKGPQFLHIMTKKGRGYAPAEKDPISW 298 >gi|254443280|ref|ZP_05056756.1| 1-deoxy-D-xylulose-5-phosphate synthase [Verrucomicrobiae bacterium DG1235] gi|198257588|gb|EDY81896.1| 1-deoxy-D-xylulose-5-phosphate synthase [Verrucomicrobiae bacterium DG1235] Length = 642 Score = 35.8 bits (81), Expect = 10.0, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 11/114 (9%) Query: 129 LTGRQG----GISKGKGGSMHMF---STKNGFYGGHGIVGAQVSLGTGIAFANKYRRS-D 180 LTGR G GI G S + S + F GH G +S G+A A +S D Sbjct: 94 LTGRNGPEFEGIRSSAGLSGFLSRDESEHDAFGAGHA--GTALSAALGMAAARDALKSKD 151 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 + VC GD A G E+ N A +I V+ +N++++ +V S N Sbjct: 152 HVVAVC-GDAAFTCGITMEALNNVAESTKRLIIVLNDNEWSIAKNVGAISKYLN 204 >gi|86751558|ref|YP_488054.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris HaA2] gi|118595612|sp|Q2IRL7|DXS_RHOP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName: Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS gi|86574586|gb|ABD09143.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris HaA2] Length = 638 Score = 35.8 bits (81), Expect = 10.0, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 31/68 (45%) Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +S G G+A A + GDG+ + G YE+ N A N +I ++ +N ++ Sbjct: 123 ISAGLGMAVARDLAGGTNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIA 182 Query: 224 TSVSRASA 231 V SA Sbjct: 183 PPVGAMSA 190 Searching..................................................done Results from round 2 >gi|255764490|ref|YP_003065085.2| dehydrogenase, E1 component [Candidatus Liberibacter asiaticus str. psy62] gi|254547841|gb|ACT57145.2| dehydrogenase, E1 component [Candidatus Liberibacter asiaticus str. psy62] Length = 364 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 364/364 (100%), Positives = 364/364 (100%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLML 60 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLML Sbjct: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLML 60 Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV Sbjct: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 Query: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD Sbjct: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV Sbjct: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREE 300 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREE Sbjct: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREE 300 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS Sbjct: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 Query: 361 DILI 364 DILI Sbjct: 361 DILI 364 >gi|110633982|ref|YP_674190.1| dehydrogenase, E1 component [Mesorhizobium sp. BNC1] gi|110284966|gb|ABG63025.1| dehydrogenase, E1 component [Chelativorans sp. BNC1] Length = 360 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 235/361 (65%), Positives = 291/361 (80%), Gaps = 3/361 (0%) Query: 5 KQDVTVGDIKMALNPSVSAKRAATSSVDCV-DIPFLEGFEVSEFNKEQELSAYRLMLLIR 63 + T K A P+ + R A ++ + D P L+ + EF KEQELS++R MLLIR Sbjct: 2 ARAATKTSAKPA--PARAGTRPAKKTIPMLNDTPVLDIPKPEEFTKEQELSSFREMLLIR 59 Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 RFEEKAGQLYGMG +GGFCHL IGQEAV++GM+M++ EGDQ+IT YR+HGH+LA G+D Sbjct: 60 RFEEKAGQLYGMGFIGGFCHLYIGQEAVVIGMQMAMKEGDQVITGYRDHGHMLATGMDPR 119 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 +MAELTGR+ G S+GKGGSMHMFS + F+GGHGIVGAQV LGTGIA AN+YR +D + Sbjct: 120 GVMAELTGRRSGYSRGKGGSMHMFSKEKNFFGGHGIVGAQVPLGTGIALANRYRGNDSVS 179 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + FGDGAANQGQVYESFN+A+LW L VIY+IENN+YAMGT+VSR+SA+TNF+ RG+SF Sbjct: 180 LTYFGDGAANQGQVYESFNMASLWKLPVIYIIENNRYAMGTAVSRSSAETNFAHRGLSFK 239 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINE 303 IPG+QVDGMD+RAVKA D AV +CR+ KGPII+EM TYRYRGHSMSDPA YR+++E+ + Sbjct: 240 IPGVQVDGMDVRAVKAAGDMAVEWCRSGKGPIILEMQTYRYRGHSMSDPAKYRSKDEVQK 299 Query: 304 MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 MRS HDPIEQVRKRLL KWASE DLK ++ VR I+ ++ +FAQSD EPDP+ELY+DIL Sbjct: 300 MRSEHDPIEQVRKRLLDKKWASEDDLKAVDKEVRDIVADAADFAQSDPEPDPSELYTDIL 359 Query: 364 I 364 I Sbjct: 360 I 360 >gi|153009389|ref|YP_001370604.1| dehydrogenase E1 component [Ochrobactrum anthropi ATCC 49188] gi|151561277|gb|ABS14775.1| dehydrogenase E1 component [Ochrobactrum anthropi ATCC 49188] Length = 346 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 228/345 (66%), Positives = 286/345 (82%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 + AK++ S + + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +G Sbjct: 2 APRAKKSPASKTQASSVTAPKAPAPVNFDKKQELDAYREMLLIRRFEEKAGQLYGMGFIG 61 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL IGQEAV+VGM+M+L EGDQ+ITAYR+HGH+LA G+ A +MAELTGR+ G+SKG Sbjct: 62 GFCHLYIGQEAVVVGMQMALKEGDQVITAYRDHGHMLAAGMSARGVMAELTGRRSGLSKG 121 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR +D + + FGDGA+NQGQVYE Sbjct: 122 KGGSMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANRYRDNDNVTLTYFGDGASNQGQVYE 181 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 SFN+A+LW L V+Y+IENN+YAMGTSVSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA Sbjct: 182 SFNMASLWKLPVVYIIENNRYAMGTSVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKA 241 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 D AV + R+ KGPII++M TYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV++RL+ Sbjct: 242 AADLAVEWTRSGKGPIILDMQTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKQRLI 301 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LKEI+ +VR I+ +S +FAQ+D EPD +ELY+DIL+ Sbjct: 302 DKGWATEEELKEIDKDVRDIVADSADFAQNDPEPDASELYTDILL 346 >gi|239832018|ref|ZP_04680347.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Ochrobactrum intermedium LMG 3301] gi|239824285|gb|EEQ95853.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Ochrobactrum intermedium LMG 3301] Length = 366 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 231/366 (63%), Positives = 293/366 (80%), Gaps = 2/366 (0%) Query: 1 MYVAKQD--VTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRL 58 MY+ + VT+ + AK+A + + + + F+K+QEL AYR Sbjct: 1 MYLVVRPYNVTIERQFREREMAPRAKKAPANKAQASSVTAPKAPAPANFDKKQELDAYRE 60 Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+L EGDQ+ITAYR+HGH+LA Sbjct: 61 MLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMALKEGDQVITAYRDHGHMLAA 120 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ A +MAELTGR+ G+SKGKGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR Sbjct: 121 GMSARGVMAELTGRRSGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRD 180 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 +D + + FGDGA+NQGQVYESFN+A+LW L V+Y+IENN+YAMGTSVSR+SA+T+FSKR Sbjct: 181 NDNVTLTYFGDGASNQGQVYESFNMASLWKLPVVYIIENNRYAMGTSVSRSSAETDFSKR 240 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 G+SFNIPG+QVDGMD+RAVKA D AV + R+ KGPII++M TYRYRGHSMSDPA YR++ Sbjct: 241 GLSFNIPGIQVDGMDVRAVKAAADLAVEWTRSGKGPIILDMQTYRYRGHSMSDPAKYRSK 300 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 EE+ +MRS HDPIEQV++R++ WA+E +LKEI+ VR I+ +S +FAQ+D EPD +EL Sbjct: 301 EEVQKMRSEHDPIEQVKQRVIEKGWATEEELKEIDKEVRDIVADSADFAQNDPEPDASEL 360 Query: 359 YSDILI 364 Y+DIL+ Sbjct: 361 YTDILL 366 >gi|315122217|ref|YP_004062706.1| dehydrogenase, E1 component [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495619|gb|ADR52218.1| dehydrogenase, E1 component [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 350 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 283/350 (80%), Positives = 322/350 (92%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 MALN S+S K SSVD +DI F + F+VSEF+K QELSAY+ MLLIRRFEEK GQLYG Sbjct: 1 MALNTSISGKENGISSVDHMDISFFKEFKVSEFDKTQELSAYQKMLLIRRFEEKTGQLYG 60 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 MG++GGFCHLCIGQEAVI+GMKM++ EGDQMITAYR+HGHIL+CGV+ASK+MAELTGRQG Sbjct: 61 MGLIGGFCHLCIGQEAVIIGMKMAMAEGDQMITAYRDHGHILSCGVEASKVMAELTGRQG 120 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 GISKGKGGSMHMFST+NGFYGGHGIVGAQVSLGTGIAFANKYR+SDK+CVVC GDGAANQ Sbjct: 121 GISKGKGGSMHMFSTENGFYGGHGIVGAQVSLGTGIAFANKYRKSDKVCVVCLGDGAANQ 180 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 GQVYESFN+A LW L VIYVIENNQYAMGTSV+RASAQ N SKRG+SFNIPG+QVDGMD+ Sbjct: 181 GQVYESFNMAELWKLGVIYVIENNQYAMGTSVARASAQPNLSKRGISFNIPGIQVDGMDV 240 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 R+VKA ++KA AYCRA+KGPII+EMLTYRYRGHSMSDPA YRTR+E+N+MR+NHDPIEQV Sbjct: 241 RSVKAAIEKATAYCRANKGPIILEMLTYRYRGHSMSDPATYRTRDEVNDMRTNHDPIEQV 300 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 R+RLL KWASE DLK IEM+VRKI+N+SVEFAQSD+EP+ +ELYSDILI Sbjct: 301 RERLLQKKWASESDLKAIEMSVRKIVNDSVEFAQSDEEPNSSELYSDILI 350 >gi|15965198|ref|NP_385551.1| pyruvate dehydrogenase alpha2 subunit protein [Sinorhizobium meliloti 1021] gi|307309212|ref|ZP_07588883.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sinorhizobium meliloti BL225C] gi|307321955|ref|ZP_07601336.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sinorhizobium meliloti AK83] gi|8474229|sp|Q9R9N5|ODPA_RHIME RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|6164934|gb|AAF04587.1|AF190792_1 pyruvate dehydrogenase alpha subunit [Sinorhizobium meliloti] gi|15074378|emb|CAC46024.1| Pyruvate dehydrogenase E1 component alpha subunit [Sinorhizobium meliloti 1021] gi|306892379|gb|EFN23184.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sinorhizobium meliloti AK83] gi|306900358|gb|EFN30974.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sinorhizobium meliloti BL225C] Length = 348 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 233/348 (66%), Positives = 286/348 (82%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 + P SA ++ + G ++EF+KE +L AYR MLLIRRFEEKAGQLYGMG Sbjct: 1 MAPRKSASVSSRKTAAKPAKKDFAGGTIAEFSKEDDLKAYREMLLIRRFEEKAGQLYGMG 60 Query: 77 MVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGI 136 +GGFCHL IGQEAV+VGM+++L EGDQ+IT YR+HGH+LACG+ A +MAELTGR+GG+ Sbjct: 61 FIGGFCHLYIGQEAVVVGMQLALKEGDQVITGYRDHGHMLACGMSARGVMAELTGRRGGL 120 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 SKGKGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR +D + + FGDGAANQGQ Sbjct: 121 SKGKGGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRGNDNVSLAYFGDGAANQGQ 180 Query: 197 VYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA 256 VYESFN+AALW L VIY++ENN+YAMGTSVSRASAQT+FS+RG SF IPG QVDGMD+RA Sbjct: 181 VYESFNMAALWKLPVIYIVENNRYAMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRA 240 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRK 316 VKA D+AV +CR+ KGPII+EMLTYRYRGHSMSDPA YR+++E+ +MRS HDPIEQV+ Sbjct: 241 VKAAADEAVEHCRSGKGPIILEMLTYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVKA 300 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 RL WA+E +LK+I+ VR I+ +S +FAQSD EPD +ELY+DIL+ Sbjct: 301 RLTDKGWATEDELKQIDKEVRDIVADSADFAQSDPEPDVSELYTDILL 348 >gi|150396296|ref|YP_001326763.1| dehydrogenase E1 component [Sinorhizobium medicae WSM419] gi|150027811|gb|ABR59928.1| dehydrogenase E1 component [Sinorhizobium medicae WSM419] Length = 348 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 235/345 (68%), Positives = 288/345 (83%), Gaps = 4/345 (1%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 SVS+++ A V G ++EF+KE +L AYR MLLIRRFEEKAGQLYGMG +G Sbjct: 8 SVSSRKTAAKPVKK----DFAGGTIAEFSKEDDLKAYREMLLIRRFEEKAGQLYGMGFIG 63 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL IGQEAV+VGM+++L EGDQ+IT YR+HGH+LACG+ A +MAELTGR+GG+SKG Sbjct: 64 GFCHLYIGQEAVVVGMQLALKEGDQVITGYRDHGHMLACGMSARGVMAELTGRRGGLSKG 123 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR +D + + FGDGAANQGQVYE Sbjct: 124 KGGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRGNDNVSLAYFGDGAANQGQVYE 183 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 SFN+AALW L VIY++ENN+YAMGTSVSRASAQT+FS+RG SF IPG QVDGMD+RAVKA Sbjct: 184 SFNMAALWKLPVIYIVENNRYAMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKA 243 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 D+AV +CR+ KGPII+EMLTYRYRGHSMSDPA YR+++E+ +MRS HDPIEQV+ RL+ Sbjct: 244 AADEAVEHCRSGKGPIILEMLTYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVKARLM 303 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LK+I+ VR I+ +S +FAQSD EPD +ELY+DIL+ Sbjct: 304 DKGWATEDELKQIDKEVRDIVADSADFAQSDPEPDVSELYTDILL 348 >gi|227821846|ref|YP_002825816.1| pyruvate dehydrogenase E1 component alpha subunit [Sinorhizobium fredii NGR234] gi|227340845|gb|ACP25063.1| pyruvate dehydrogenase E1 component alpha subunit [Sinorhizobium fredii NGR234] Length = 348 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 237/345 (68%), Positives = 289/345 (83%), Gaps = 4/345 (1%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 SVS+++AA + G ++EF+KE EL AYR MLLIRRFEEKAGQLYGMG +G Sbjct: 8 SVSSRKAAAKTSKK----DFAGGTIAEFSKEDELKAYREMLLIRRFEEKAGQLYGMGFIG 63 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL IGQEAV+VGM+++L EGDQ+IT YR+HGH+LACG+ A +MAELTGR+GG+SKG Sbjct: 64 GFCHLYIGQEAVVVGMQLALKEGDQVITGYRDHGHMLACGMSARGVMAELTGRRGGLSKG 123 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR +D + + FGDGAANQGQVYE Sbjct: 124 KGGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRGNDNVSLAYFGDGAANQGQVYE 183 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 SFN+AALW L VIY++ENN+YAMGTSVSRASAQT+FS+RG SF IPG QVDGMD+RAVKA Sbjct: 184 SFNMAALWKLPVIYIVENNRYAMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKA 243 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 D+AV +CR+ KGPII+EMLTYRYRGHSMSDPA YR+++E+ +MRS HDPIEQV+ RL+ Sbjct: 244 AADEAVEHCRSGKGPIILEMLTYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVKARLV 303 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WASE +LK+++ VR I+ +S +FAQSD EPD AELY+DIL+ Sbjct: 304 EKGWASEDELKQVDKEVRDIVADSADFAQSDPEPDVAELYTDILL 348 >gi|222085876|ref|YP_002544407.1| pyruvate dehydrogenase alpha subunit protein [Agrobacterium radiobacter K84] gi|221723324|gb|ACM26480.1| pyruvate dehydrogenase alpha subunit protein [Agrobacterium radiobacter K84] Length = 347 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 235/346 (67%), Positives = 281/346 (81%), Gaps = 2/346 (0%) Query: 21 VSAKRAATSSVDCVDIPFLE--GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMV 78 K A+ SS P E G ++EF+++ ELSAYR MLLIRRFEEKAGQLYGMG + Sbjct: 2 APRKSASVSSRKTASRPAKETNGGAIAEFDRDAELSAYREMLLIRRFEEKAGQLYGMGFI 61 Query: 79 GGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK 138 GGFCHL IGQEAV+VGM+M+L +GDQ+IT YR+HGH+LA G+ A +MAELTGR+GG S+ Sbjct: 62 GGFCHLYIGQEAVVVGMQMALKDGDQVITGYRDHGHMLAAGMSARGVMAELTGRKGGYSR 121 Query: 139 GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 GKGGSMHMFS + FYGGHGIVGAQVSLGTG+ FAN YR +D + V FGDGAANQGQVY Sbjct: 122 GKGGSMHMFSKEKNFYGGHGIVGAQVSLGTGLGFANWYRGNDSVSVAYFGDGAANQGQVY 181 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 ESFN+A LW L VIYVIENN+YAMGTS +RA+AQ +FSKRG SF IPG+QVD MD+RAVK Sbjct: 182 ESFNMAQLWKLPVIYVIENNRYAMGTSTARATAQPDFSKRGASFGIPGIQVDAMDVRAVK 241 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 A D+AV YCR+ KGPII+EMLTYRYRGHSMSDPA YR+++E+ +MRS HDPIEQVR RL Sbjct: 242 AAADEAVEYCRSGKGPIILEMLTYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVRVRL 301 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 L WASE DLK I+ +VR I+ +S +FAQ+D EPD +ELY+DIL+ Sbjct: 302 LDKGWASEDDLKVIDKDVRDIVADSADFAQADPEPDASELYTDILL 347 >gi|319783388|ref|YP_004142864.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169276|gb|ADV12814.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 345 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 227/342 (66%), Positives = 279/342 (81%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 +A R A + L + EF K++EL+AYR MLLIRRFEEKAGQLYGMG +GG Sbjct: 2 ATAARKAPAKSKSDGKSGLSAPKPVEFTKDEELAAYRHMLLIRRFEEKAGQLYGMGFIGG 61 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL IGQEAV+ GMKM+L +GDQMITAYR+HGH+LA + +MAELTGR+GG+S+GK Sbjct: 62 FCHLYIGQEAVVTGMKMALIDGDQMITAYRDHGHMLAMELSPRGVMAELTGRRGGLSRGK 121 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR ++ + + FGDGAANQGQVYES Sbjct: 122 GGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRDNNNVSLTYFGDGAANQGQVYES 181 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A+LW L VIY+IENN+YAMGTSVSR+SA+TNFS RG SF IPG+QVDGMD+RAVKA Sbjct: 182 FNMASLWKLPVIYIIENNRYAMGTSVSRSSAETNFSHRGASFKIPGIQVDGMDVRAVKAA 241 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 D+A +CRA GPII+EM TYRYRGHSMSDPA YR++EE+ +MRS+HDPIEQV+ RL+ Sbjct: 242 GDQATEWCRAGNGPIILEMQTYRYRGHSMSDPAKYRSKEEVQKMRSDHDPIEQVKARLIE 301 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 KWA+E +LK I+ VR I+ ++ EFAQ+D EPDP+EL++DI Sbjct: 302 KKWATEDELKTIDKEVRDIVADAAEFAQNDAEPDPSELWTDI 343 >gi|260459502|ref|ZP_05807757.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Mesorhizobium opportunistum WSM2075] gi|259035056|gb|EEW36312.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Mesorhizobium opportunistum WSM2075] Length = 345 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 225/342 (65%), Positives = 279/342 (81%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 +A R A + L + +EF K++EL+AYR MLLIRRFEEKAGQLYGMG +GG Sbjct: 2 ATAARKAPAKSKSDGKSVLSAPKPAEFTKDEELAAYRHMLLIRRFEEKAGQLYGMGFIGG 61 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL IGQEAV+ GMKM+L +GDQMITAYR+HGH+LA + +MAELTGR+GG+S+GK Sbjct: 62 FCHLYIGQEAVVTGMKMALIDGDQMITAYRDHGHMLAMELSPRGVMAELTGRRGGLSRGK 121 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR ++ + + FGDGAANQGQVYES Sbjct: 122 GGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRENNNVSLTYFGDGAANQGQVYES 181 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A+LW L VIY+IENN+YAMGTSVSR+SA+TNFS RG SF IPG+QVDGMD+RAVK+ Sbjct: 182 FNMASLWKLPVIYIIENNRYAMGTSVSRSSAETNFSHRGASFKIPGIQVDGMDVRAVKSA 241 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 D+A +CRA GPII+EM TYRYRGHSMSDPA YR++EE+ +MRS+HDPIEQV+ RL Sbjct: 242 GDQATEWCRAGNGPIILEMQTYRYRGHSMSDPAKYRSKEEVQKMRSDHDPIEQVKARLTQ 301 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 KWA+E +LK I+ VR ++ ++ EFAQ+D EPDP+EL++DI Sbjct: 302 KKWATEDELKAIDKEVRDVVADAAEFAQNDAEPDPSELWTDI 343 >gi|241204524|ref|YP_002975620.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858414|gb|ACS56081.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 348 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 219/324 (67%), Positives = 275/324 (84%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V++F++ +EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 25 GGPVADFDRNEELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAQK 84 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 +GDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GKGGSMHMFS + FYGGHGIV Sbjct: 85 DGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGKGGSMHMFSKEKHFYGGHGIV 144 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN+YR +D + + FGDGAANQGQVYESFN+AALW L ++Y++ENN+Y Sbjct: 145 GAQVSLGTGLAFANRYRGNDNVSIAYFGDGAANQGQVYESFNMAALWKLPIVYIVENNRY 204 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS +RA+AQ+N+S RG F IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EML Sbjct: 205 AMGTSTARATAQSNYSLRGSGFGIPGIQVDGMDVRAVKAAADEALEHCRSGKGPIILEML 264 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YR+++E+ +MRS HDPIEQV+ RL+ WASE DLK I+ +VR I+ Sbjct: 265 TYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVKARLVEKGWASEDDLKAIDKDVRDIV 324 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +S +FAQ+D EPD +ELY+DIL+ Sbjct: 325 ADSADFAQADPEPDASELYTDILL 348 >gi|116251997|ref|YP_767835.1| pyruvate dehydrogenase subunit [Rhizobium leguminosarum bv. viciae 3841] gi|115256645|emb|CAK07733.1| putative pyruvate dehydrogenase subunit [Rhizobium leguminosarum bv. viciae 3841] Length = 348 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 219/324 (67%), Positives = 275/324 (84%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V++F++ +EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 25 GGPVADFDRNEELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAQK 84 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 +GDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GKGGSMHMFS + FYGGHGIV Sbjct: 85 DGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGKGGSMHMFSKEKHFYGGHGIV 144 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN+YR +D + + FGDGAANQGQVYESFN+AALW L ++Y++ENN+Y Sbjct: 145 GAQVSLGTGLAFANRYRGNDSVSIAYFGDGAANQGQVYESFNMAALWKLPIVYIVENNRY 204 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS +RA+AQ+N+S RG F IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EML Sbjct: 205 AMGTSTARATAQSNYSLRGSGFGIPGIQVDGMDVRAVKAAADEALEHCRSGKGPIILEML 264 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YR+++E+ +MRS HDPIEQV+ RL+ WASE DLK I+ +VR I+ Sbjct: 265 TYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVKARLVEKGWASEDDLKAIDKDVRDIV 324 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +S +FAQ+D EPD +ELY+DIL+ Sbjct: 325 ADSADFAQADPEPDVSELYTDILL 348 >gi|327189241|gb|EGE56420.1| pyruvate dehydrogenase (acetyl-transferring) protein, alpha subunit [Rhizobium etli CNPAF512] Length = 348 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 219/324 (67%), Positives = 272/324 (83%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V++F++++EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 25 GGPVADFDRDEELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAQK 84 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 EGDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GKGGSMHMFS + FYGGHGIV Sbjct: 85 EGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGKGGSMHMFSKEKHFYGGHGIV 144 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN YR + + + FGDGAANQGQVYE FN+AALW L ++Y++ENN+Y Sbjct: 145 GAQVSLGTGLAFANHYRGNGNVSIAYFGDGAANQGQVYECFNMAALWKLPIVYIVENNRY 204 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS +RA+AQ+N+S RG F IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EML Sbjct: 205 AMGTSTARATAQSNYSLRGSGFGIPGIQVDGMDVRAVKAAADEALEHCRSGKGPIILEML 264 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YRT+EE+ +MRS DPIEQV+ RL+ WASE DLK I+ +VR I+ Sbjct: 265 TYRYRGHSMSDPAKYRTKEEVQKMRSEQDPIEQVKARLIEKGWASEDDLKAIDKDVRDIV 324 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +S +FAQ+D EPD +ELY+DIL+ Sbjct: 325 ADSADFAQADPEPDASELYTDILL 348 >gi|254439388|ref|ZP_05052882.1| pyruvate dehydrogenase E1 component, alpha subunit [Octadecabacter antarcticus 307] gi|198254834|gb|EDY79148.1| pyruvate dehydrogenase E1 component, alpha subunit [Octadecabacter antarcticus 307] Length = 338 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 195/328 (59%), Positives = 248/328 (75%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 +P + + + E+ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG+ Sbjct: 1 MPAKKTLKKPNVSAEELLGYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGL 60 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 + + EGD+ IT YR+HGH+LACG+D +MAELTGRQ G S+GKGGSMHMFS + FYG Sbjct: 61 EAATKEGDKRITTYRDHGHMLACGMDPKGVMAELTGRQDGYSRGKGGSMHMFSAEKHFYG 120 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 GHGIVGA V LG G+AF++KYR +D + FGDGAANQGQVYE+FN+AALW+L VI+VI Sbjct: 121 GHGIVGANVPLGAGLAFSDKYRGNDNVTFTYFGDGAANQGQVYETFNMAALWDLPVIFVI 180 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENNQYAMGTS +R+++ + RG +F IPG VDGM++ AVK +KAVA+CR+ GP Sbjct: 181 ENNQYAMGTSQARSTSTPDLYTRGEAFGIPGEIVDGMNVLAVKEASEKAVAHCRSGAGPY 240 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 ++E+ TYRYRGHSMSDPA YRTR+E+ +MR DPIEQVR LL K A+E DLK I+ Sbjct: 241 VLEVKTYRYRGHSMSDPAKYRTRDEVQKMREERDPIEQVRSLLLTGKHATEDDLKAIDKE 300 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++ +N + EFA+ EP EL++DI Sbjct: 301 IKATVNEAAEFAKESPEPHLDELWTDIY 328 >gi|190891627|ref|YP_001978169.1| pyruvate dehydrogenase (acetyl-transferring) protein, alpha subunit [Rhizobium etli CIAT 652] gi|190696906|gb|ACE90991.1| pyruvate dehydrogenase (acetyl-transferring) protein, alpha subunit [Rhizobium etli CIAT 652] Length = 348 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 220/324 (67%), Positives = 273/324 (84%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V++F++++EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 25 GGPVADFDRDEELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAQK 84 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 EGDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GKGGSMHMFS + FYGGHGIV Sbjct: 85 EGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGKGGSMHMFSKEKHFYGGHGIV 144 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN YR + + + FGDGAANQGQVYESFN+AALW L ++Y++ENN+Y Sbjct: 145 GAQVSLGTGLAFANHYRGNGNVSIAYFGDGAANQGQVYESFNMAALWKLPIVYIVENNRY 204 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS +RA+AQ+N+S RG F IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EML Sbjct: 205 AMGTSTARATAQSNYSLRGSGFGIPGIQVDGMDVRAVKAAADEALEHCRSGKGPIILEML 264 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YRT+EE+ +MRS DPIEQV+ RL+ WASE DLK I+ +VR I+ Sbjct: 265 TYRYRGHSMSDPAKYRTKEEVQKMRSEQDPIEQVKARLIEKGWASEDDLKAIDKDVRDIV 324 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +S +FAQ+D EPD +ELY+DIL+ Sbjct: 325 ADSADFAQADPEPDASELYTDILL 348 >gi|256061212|ref|ZP_05451364.1| dehydrogenase E1 component [Brucella neotomae 5K33] gi|261325220|ref|ZP_05964417.1| dehydrogenase E1 component [Brucella neotomae 5K33] gi|261301200|gb|EEY04697.1| dehydrogenase E1 component [Brucella neotomae 5K33] Length = 346 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 228/345 (66%), Positives = 282/345 (81%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 + AK+A + + + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +G Sbjct: 2 APRAKKAPAGKTQASSVNAPKAPSPANFDKKQELEAYREMLLIRRFEEKAGQLYGMGFIG 61 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LA G+ A +MAELTGR+GG+SKG Sbjct: 62 GFCHLYIGQEAVVVGMQMALQEGDQVITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKG 121 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN YR + + + FGDGAANQGQVYE Sbjct: 122 KGGSMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYE 181 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 SFN+A+LW L VIYVIENN+YAMGT+VSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA Sbjct: 182 SFNMASLWKLPVIYVIENNRYAMGTAVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKA 241 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 D A + R+ KGPII+EMLTYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ Sbjct: 242 AADLATEWARSGKGPIILEMLTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLI 301 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LKEI+ VR I+ ++ +FA++D EPD +ELY+DIL+ Sbjct: 302 EKGWATEEELKEIDREVRDIVADAADFAENDPEPDASELYTDILL 346 >gi|86357554|ref|YP_469446.1| pyruvate dehydrogenase alpha subunit protein [Rhizobium etli CFN 42] gi|86281656|gb|ABC90719.1| pyruvate dehydrogenase alpha subunit protein [Rhizobium etli CFN 42] Length = 348 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 220/324 (67%), Positives = 273/324 (84%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V++F++++EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 25 GGPVADFDRDEELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAQK 84 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 EGDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GKGGSMHMFS + FYGGHGIV Sbjct: 85 EGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGKGGSMHMFSKEKHFYGGHGIV 144 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN YR + + + FGDGAANQGQVYESFN+AALW L ++Y++ENN+Y Sbjct: 145 GAQVSLGTGLAFANHYRGNGNVAIAYFGDGAANQGQVYESFNMAALWKLPIVYIVENNRY 204 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS +RA+AQ+N+S RG F IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EML Sbjct: 205 AMGTSTARATAQSNYSLRGSGFGIPGIQVDGMDVRAVKAAADEALEHCRSGKGPIILEML 264 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YRT+EE+ +MRS DPIEQV+ RL+ WASE DLK I+ +VR I+ Sbjct: 265 TYRYRGHSMSDPAKYRTKEEVQKMRSEQDPIEQVKARLIEKGWASEDDLKAIDKDVRDIV 324 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +S +FAQ+D EPD +ELY+DIL+ Sbjct: 325 ADSADFAQADPEPDASELYTDILL 348 >gi|254719193|ref|ZP_05181004.1| dehydrogenase E1 component [Brucella sp. 83/13] gi|265984190|ref|ZP_06096925.1| dehydrogenase E1 component [Brucella sp. 83/13] gi|306838186|ref|ZP_07471042.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella sp. NF 2653] gi|264662782|gb|EEZ33043.1| dehydrogenase E1 component [Brucella sp. 83/13] gi|306406776|gb|EFM62999.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella sp. NF 2653] Length = 346 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 228/345 (66%), Positives = 281/345 (81%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 + AK+A + + + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +G Sbjct: 2 APRAKKAPAGKTQASSVNAPKAPSPANFDKKQELEAYRKMLLIRRFEEKAGQLYGMGFIG 61 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LA G+ A +MAELTGR+GG+SKG Sbjct: 62 GFCHLYIGQEAVVVGMQMALQEGDQVITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKG 121 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN YR + + + FGDGAANQGQVYE Sbjct: 122 KGGSMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYE 181 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 SFN+A+LW L VIYVIENN+YAMGT+VSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA Sbjct: 182 SFNMASLWKLPVIYVIENNRYAMGTAVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKA 241 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 D A + R+ KGPII+EMLTYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ Sbjct: 242 AADLATEWARSGKGPIILEMLTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLI 301 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LKEI+ VR I+ ++ +FA+ D EPD +ELY+DIL+ Sbjct: 302 EKGWATEEELKEIDREVRDIVADAADFAEHDPEPDASELYTDILL 346 >gi|304391614|ref|ZP_07373556.1| pyruvate dehydrogenase E1 component, alpha subunit [Ahrensia sp. R2A130] gi|303295843|gb|EFL90201.1| pyruvate dehydrogenase E1 component, alpha subunit [Ahrensia sp. R2A130] Length = 350 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 211/319 (66%), Positives = 266/319 (83%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +++K+QEL+AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+ GM+ +L EGDQ Sbjct: 25 DYDKQQELNAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVTGMQAALIEGDQA 84 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+HGH+LACG+D IMAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGAQVS Sbjct: 85 ITAYRDHGHMLACGMDPKGIMAELTGREGGYSRGKGGSMHMFSKEKNFYGGHGIVGAQVS 144 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTG+AF NKY + + FGDGA+NQGQVYESFN+A LW+L VIY+IENN+YAMGT+ Sbjct: 145 LGTGLAFNNKYTENGNVSCTYFGDGASNQGQVYESFNMAKLWDLPVIYIIENNRYAMGTA 204 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R+SA T+FSKRG SFNIPG++VDGMD+RAV+A + A +CR+ GPII++M TYRYR Sbjct: 205 VHRSSALTDFSKRGCSFNIPGIEVDGMDVRAVQAAGELAADWCRSGHGPIILDMQTYRYR 264 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YR+++E+ +MR+ +DPIE+V+ R+ KWA E +LK I+ VR I+ + + Sbjct: 265 GHSMSDPAKYRSKDEVQKMRAENDPIERVKARMAEKKWADEDELKAIDKEVRAIVAEAAD 324 Query: 346 FAQSDKEPDPAELYSDILI 364 FAQ++ EPDP+EL++DILI Sbjct: 325 FAQTNPEPDPSELWTDILI 343 >gi|256369555|ref|YP_003107065.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Brucella microti CCM 4915] gi|255999717|gb|ACU48116.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Brucella microti CCM 4915] Length = 346 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 227/345 (65%), Positives = 280/345 (81%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 + AK+A + + + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +G Sbjct: 2 APRAKKAPAGKTQASSVNAPKAPSPANFDKKQELEAYREMLLIRRFEEKAGQLYGMGFIG 61 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LA G+ A +MAELTGR+GG+SKG Sbjct: 62 GFCHLYIGQEAVVVGMQMALQEGDQVITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKG 121 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN YR + + + FGDGAANQGQVYE Sbjct: 122 KGGSMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYE 181 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 SFN+A+LW L VIYVIENN+YAMGT+VSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA Sbjct: 182 SFNMASLWKLPVIYVIENNRYAMGTAVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKA 241 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 D A + R+ KGPII+EMLTYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ Sbjct: 242 AADLATEWARSGKGPIILEMLTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLI 301 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 W +E +LKEI+ VR I+ ++ +FA+ D EPD +ELY+DIL+ Sbjct: 302 EKGWVTEEELKEIDREVRDIVADAADFAEHDPEPDASELYTDILL 346 >gi|62290042|ref|YP_221835.1| pyruvate dehydrogenase complex, E1 component subunit alpha [Brucella abortus bv. 1 str. 9-941] gi|82699969|ref|YP_414543.1| dehydrogenase, E1 component:mitochondrial substrate carrier [Brucella melitensis biovar Abortus 2308] gi|148559462|ref|YP_001259050.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Brucella ovis ATCC 25840] gi|189024283|ref|YP_001935051.1| Dehydrogenase, E1 component [Brucella abortus S19] gi|225627599|ref|ZP_03785636.1| dehydrogenase E1 component [Brucella ceti str. Cudo] gi|225852629|ref|YP_002732862.1| dehydrogenase E1 component [Brucella melitensis ATCC 23457] gi|237815552|ref|ZP_04594549.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella abortus str. 2308 A] gi|254689355|ref|ZP_05152609.1| dehydrogenase E1 component [Brucella abortus bv. 6 str. 870] gi|254693839|ref|ZP_05155667.1| dehydrogenase E1 component [Brucella abortus bv. 3 str. Tulya] gi|254697488|ref|ZP_05159316.1| dehydrogenase E1 component [Brucella abortus bv. 2 str. 86/8/59] gi|254706686|ref|ZP_05168514.1| dehydrogenase E1 component [Brucella pinnipedialis M163/99/10] gi|254710206|ref|ZP_05172017.1| dehydrogenase E1 component [Brucella pinnipedialis B2/94] gi|254714203|ref|ZP_05176014.1| dehydrogenase E1 component [Brucella ceti M644/93/1] gi|254717638|ref|ZP_05179449.1| dehydrogenase E1 component [Brucella ceti M13/05/1] gi|254730385|ref|ZP_05188963.1| dehydrogenase E1 component [Brucella abortus bv. 4 str. 292] gi|256031700|ref|ZP_05445314.1| dehydrogenase E1 component [Brucella pinnipedialis M292/94/1] gi|256113685|ref|ZP_05454496.1| dehydrogenase E1 component [Brucella melitensis bv. 3 str. Ether] gi|256159855|ref|ZP_05457588.1| dehydrogenase E1 component [Brucella ceti M490/95/1] gi|256255101|ref|ZP_05460637.1| dehydrogenase E1 component [Brucella ceti B1/94] gi|256257601|ref|ZP_05463137.1| dehydrogenase E1 component [Brucella abortus bv. 9 str. C68] gi|256263878|ref|ZP_05466410.1| dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|260168832|ref|ZP_05755643.1| dehydrogenase E1 component [Brucella sp. F5/99] gi|260546595|ref|ZP_05822334.1| dehydrogenase [Brucella abortus NCTC 8038] gi|260754872|ref|ZP_05867220.1| dehydrogenase E1 component [Brucella abortus bv. 6 str. 870] gi|260758089|ref|ZP_05870437.1| dehydrogenase E1 component [Brucella abortus bv. 4 str. 292] gi|260761913|ref|ZP_05874256.1| dehydrogenase E1 component [Brucella abortus bv. 2 str. 86/8/59] gi|260883884|ref|ZP_05895498.1| dehydrogenase E1 component [Brucella abortus bv. 9 str. C68] gi|261214123|ref|ZP_05928404.1| dehydrogenase E1 component [Brucella abortus bv. 3 str. Tulya] gi|261219477|ref|ZP_05933758.1| dehydrogenase E1 component [Brucella ceti M13/05/1] gi|261222296|ref|ZP_05936577.1| dehydrogenase E1 component [Brucella ceti B1/94] gi|261314147|ref|ZP_05953344.1| dehydrogenase E1 component [Brucella pinnipedialis M163/99/10] gi|261317764|ref|ZP_05956961.1| dehydrogenase E1 component [Brucella pinnipedialis B2/94] gi|261321973|ref|ZP_05961170.1| dehydrogenase E1 component [Brucella ceti M644/93/1] gi|261758320|ref|ZP_06002029.1| dehydrogenase [Brucella sp. F5/99] gi|265988795|ref|ZP_06101352.1| dehydrogenase E1 component [Brucella pinnipedialis M292/94/1] gi|265995046|ref|ZP_06107603.1| dehydrogenase E1 component [Brucella melitensis bv. 3 str. Ether] gi|265998260|ref|ZP_06110817.1| dehydrogenase E1 component [Brucella ceti M490/95/1] gi|294852467|ref|ZP_06793140.1| pyruvate dehydrogenase E1 component [Brucella sp. NVSL 07-0026] gi|297248443|ref|ZP_06932161.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella abortus bv. 5 str. B3196] gi|306841855|ref|ZP_07474537.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella sp. BO2] gi|306843994|ref|ZP_07476589.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella sp. BO1] gi|62196174|gb|AAX74474.1| PdhA, pyruvate dehydrogenase complex, E1 component, alpha subunit [Brucella abortus bv. 1 str. 9-941] gi|82616070|emb|CAJ11108.1| Dehydrogenase, E1 component:Mitochondrial substrate carrier [Brucella melitensis biovar Abortus 2308] gi|148370719|gb|ABQ60698.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella ovis ATCC 25840] gi|189019855|gb|ACD72577.1| Dehydrogenase, E1 component [Brucella abortus S19] gi|225617604|gb|EEH14649.1| dehydrogenase E1 component [Brucella ceti str. Cudo] gi|225640994|gb|ACO00908.1| dehydrogenase E1 component [Brucella melitensis ATCC 23457] gi|237788850|gb|EEP63061.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella abortus str. 2308 A] gi|260095645|gb|EEW79522.1| dehydrogenase [Brucella abortus NCTC 8038] gi|260668407|gb|EEX55347.1| dehydrogenase E1 component [Brucella abortus bv. 4 str. 292] gi|260672345|gb|EEX59166.1| dehydrogenase E1 component [Brucella abortus bv. 2 str. 86/8/59] gi|260674980|gb|EEX61801.1| dehydrogenase E1 component [Brucella abortus bv. 6 str. 870] gi|260873412|gb|EEX80481.1| dehydrogenase E1 component [Brucella abortus bv. 9 str. C68] gi|260915730|gb|EEX82591.1| dehydrogenase E1 component [Brucella abortus bv. 3 str. Tulya] gi|260920880|gb|EEX87533.1| dehydrogenase E1 component [Brucella ceti B1/94] gi|260924566|gb|EEX91134.1| dehydrogenase E1 component [Brucella ceti M13/05/1] gi|261294663|gb|EEX98159.1| dehydrogenase E1 component [Brucella ceti M644/93/1] gi|261296987|gb|EEY00484.1| dehydrogenase E1 component [Brucella pinnipedialis B2/94] gi|261303173|gb|EEY06670.1| dehydrogenase E1 component [Brucella pinnipedialis M163/99/10] gi|261738304|gb|EEY26300.1| dehydrogenase [Brucella sp. F5/99] gi|262552728|gb|EEZ08718.1| dehydrogenase E1 component [Brucella ceti M490/95/1] gi|262766159|gb|EEZ11948.1| dehydrogenase E1 component [Brucella melitensis bv. 3 str. Ether] gi|263094009|gb|EEZ17943.1| dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|264660992|gb|EEZ31253.1| dehydrogenase E1 component [Brucella pinnipedialis M292/94/1] gi|294821056|gb|EFG38055.1| pyruvate dehydrogenase E1 component [Brucella sp. NVSL 07-0026] gi|297175612|gb|EFH34959.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella abortus bv. 5 str. B3196] gi|306275749|gb|EFM57473.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella sp. BO1] gi|306288082|gb|EFM59479.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brucella sp. BO2] gi|326409148|gb|ADZ66213.1| Dehydrogenase, E1 component [Brucella melitensis M28] Length = 346 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 228/345 (66%), Positives = 281/345 (81%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 + AK+A + + + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +G Sbjct: 2 APRAKKAPAGKTQASSVNAPKAPSPANFDKKQELEAYREMLLIRRFEEKAGQLYGMGFIG 61 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LA G+ A +MAELTGR+GG+SKG Sbjct: 62 GFCHLYIGQEAVVVGMQMALQEGDQVITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKG 121 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN YR + + + FGDGAANQGQVYE Sbjct: 122 KGGSMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYE 181 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 SFN+A+LW L VIYVIENN+YAMGT+VSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA Sbjct: 182 SFNMASLWKLPVIYVIENNRYAMGTAVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKA 241 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 D A + R+ KGPII+EMLTYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ Sbjct: 242 AADLATEWARSGKGPIILEMLTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLI 301 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LKEI+ VR I+ ++ +FA+ D EPD +ELY+DIL+ Sbjct: 302 EKGWATEEELKEIDREVRDIVADAADFAEHDPEPDASELYTDILL 346 >gi|254452935|ref|ZP_05066372.1| pyruvate dehydrogenase E1 component, alpha subunit [Octadecabacter antarcticus 238] gi|198267341|gb|EDY91611.1| pyruvate dehydrogenase E1 component, alpha subunit [Octadecabacter antarcticus 238] Length = 337 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 192/324 (59%), Positives = 244/324 (75%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + ++ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KTSKKPNVSADELLGYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAT 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +GD+ IT YR+HGH+LACG+D +MAELTGRQ G SKGKGGSMHMFS + FYGGHGI Sbjct: 65 KKGDKRITTYRDHGHMLACGMDPKGVMAELTGRQDGYSKGKGGSMHMFSKEKDFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGA V LG G+AF++KYR +D + FGDGAANQGQVYE+FN+AALW+L VI+VIENNQ Sbjct: 125 VGANVPLGAGLAFSDKYRGNDNVTFTYFGDGAANQGQVYETFNMAALWDLPVIFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTS R+++ + RG +F IPG VDGM++ AVK +KAVA+CR+ GP ++E+ Sbjct: 185 YAMGTSQKRSTSTPDLYTRGEAFGIPGEIVDGMNVLAVKEASEKAVAHCRSGAGPYVLEV 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTR+E+ +MR DPIEQVR LL K A+E DLK I+ ++ Sbjct: 245 KTYRYRGHSMSDPAKYRTRDEVQKMREERDPIEQVRSLLLTGKHATEDDLKAIDKEIKAT 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N + EFA+ P EL++DI Sbjct: 305 VNEAAEFAKESPIPHLDELWTDIY 328 >gi|209549202|ref|YP_002281119.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534958|gb|ACI54893.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 348 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 217/324 (66%), Positives = 272/324 (83%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V++F++++EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 25 GGPVADFDRDEELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAQK 84 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 EGDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GKGGSMHMFS + FYGGHGIV Sbjct: 85 EGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGKGGSMHMFSKEKHFYGGHGIV 144 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN YR + + + FGDGAANQGQVYESFN+AALW L ++Y++ENN+Y Sbjct: 145 GAQVSLGTGLAFANHYRGNGNVSIAYFGDGAANQGQVYESFNMAALWKLPIVYIVENNRY 204 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS +RA+AQ+N+S RG F IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EML Sbjct: 205 AMGTSTARATAQSNYSLRGSGFGIPGIQVDGMDVRAVKAAADEALEHCRSGKGPIILEML 264 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YR++EE+ +MRS DPIEQV+ RL+ WASE DLK I+ ++R I+ Sbjct: 265 TYRYRGHSMSDPAKYRSKEEVQKMRSEQDPIEQVKARLIEKGWASEDDLKAIDKDIRDIV 324 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +S +FAQ+D EPD + LY+DIL+ Sbjct: 325 ADSADFAQADPEPDASALYTDILL 348 >gi|114704544|ref|ZP_01437452.1| pyruvate dehydrogenase alpha2 subunit protein [Fulvimarina pelagi HTCC2506] gi|114539329|gb|EAU42449.1| pyruvate dehydrogenase alpha2 subunit protein [Fulvimarina pelagi HTCC2506] Length = 379 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 218/328 (66%), Positives = 274/328 (83%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 + E ++F+KE+EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM Sbjct: 43 LEDFSTPEPADFSKEEELRAYRDMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGM 102 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 +MS+ EGDQ++T YR+HGH+LA G++A +MAELTGR+ G SKGKGGSMHMFS + FYG Sbjct: 103 QMSMKEGDQVVTGYRDHGHMLATGMEARGVMAELTGRRSGYSKGKGGSMHMFSKEKKFYG 162 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 GHGIVGAQV +G+G+AFANKY +D + + FGDGAANQGQVYESFN+A+LW L IYVI Sbjct: 163 GHGIVGAQVPIGSGLAFANKYNGTDAVSITYFGDGAANQGQVYESFNMASLWKLPAIYVI 222 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENN+YAMGTSVSRASA+T+FS RG+SF IPG+QVDGMD+RAVKA D AV +CR+ +GPI Sbjct: 223 ENNRYAMGTSVSRASAETDFSHRGLSFKIPGIQVDGMDVRAVKAAGDMAVEHCRSGEGPI 282 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 I+EM+TYRYRGHSMSDPA YR+R+E+ +MRS DPIEQV+KRL N SE ++K+I+ Sbjct: 283 ILEMMTYRYRGHSMSDPAKYRSRDEVQKMRSESDPIEQVKKRLTENHNMSEDEVKKIDKE 342 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDIL 363 VR+I+ ++ +FAQ+D EPDP+EL++D+ Sbjct: 343 VREIVADAADFAQNDPEPDPSELWTDVY 370 >gi|17987137|ref|NP_539771.1| pyruvate dehydrogenase E1 component, alpha subunit [Brucella melitensis bv. 1 str. 16M] gi|256044786|ref|ZP_05447690.1| pyruvate dehydrogenase E1 component, alpha subunit [Brucella melitensis bv. 1 str. Rev.1] gi|260565611|ref|ZP_05836095.1| dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|265991210|ref|ZP_06103767.1| dehydrogenase E1 component [Brucella melitensis bv. 1 str. Rev.1] gi|17982801|gb|AAL52035.1| pyruvate dehydrogenase e1 component, alpha subunit [Brucella melitensis bv. 1 str. 16M] gi|260151679|gb|EEW86773.1| dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|263001994|gb|EEZ14569.1| dehydrogenase E1 component [Brucella melitensis bv. 1 str. Rev.1] Length = 346 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 227/345 (65%), Positives = 281/345 (81%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 + AK+A + + + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +G Sbjct: 2 APRAKKAPAGKTQASSVNAPKAPSPANFDKKQELEAYREMLLIRRFEEKAGQLYGMGFIG 61 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LA G+ A +MAELTGR+GG+SKG Sbjct: 62 GFCHLYIGQEAVVVGMQMALQEGDQVITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKG 121 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN YR + + + FGDGAANQGQVYE Sbjct: 122 KGGSMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYE 181 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 SFN+A+LW L VIYVIENN+YAMGT+VSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA Sbjct: 182 SFNMASLWKLPVIYVIENNRYAMGTAVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKA 241 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 D A + R+ +GPII+EMLTYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ Sbjct: 242 AADLATEWARSGRGPIILEMLTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLI 301 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LKEI+ VR I+ ++ +FA+ D EPD +ELY+DIL+ Sbjct: 302 EKGWATEEELKEIDREVRDIVADAADFAEHDPEPDASELYTDILL 346 >gi|154253581|ref|YP_001414405.1| pyruvate dehydrogenase (acetyl-transferring) [Parvibaculum lavamentivorans DS-1] gi|154157531|gb|ABS64748.1| Pyruvate dehydrogenase (acetyl-transferring) [Parvibaculum lavamentivorans DS-1] Length = 341 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 219/319 (68%), Positives = 268/319 (84%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + ++E +L AYR MLLIRRFEEKAGQ+YGMG++GGFCHL IGQEAV++GM+M++ EGDQ Sbjct: 18 APLSEEDDLRAYRDMLLIRRFEEKAGQMYGMGLIGGFCHLYIGQEAVVIGMQMAIEEGDQ 77 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT YR+HGH+LACG+D +MAELTGR GG S+GKGGSMHMFS F+GGHGIVGAQV Sbjct: 78 VITGYRDHGHMLACGMDPKGVMAELTGRDGGYSRGKGGSMHMFSRDKNFFGGHGIVGAQV 137 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LGTG+AFAN+YR +D++C+ FGDGAANQGQVYESFN+A LW+L V+YVIENNQYAMGT Sbjct: 138 PLGTGLAFANRYRENDRVCLAYFGDGAANQGQVYESFNMAELWSLPVVYVIENNQYAMGT 197 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV+R+SAQT+ SKRG SFNIPG QVDGMD+RAV+ +AV +CRA KGP I+EM TYRY Sbjct: 198 SVARSSAQTDLSKRGASFNIPGAQVDGMDVRAVREAGARAVEWCRAGKGPYILEMKTYRY 257 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR +EE+++MR+ HDPIEQVR RLL +K SE DLK I+ ++ I+N + Sbjct: 258 RGHSMSDPAKYRAKEEVSKMRAEHDPIEQVRMRLLESKSLSEDDLKAIDKEIKAIVNEAA 317 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFAQS EPDP EL++DIL Sbjct: 318 EFAQSSPEPDPRELWTDIL 336 >gi|190570556|ref|YP_001974914.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019198|ref|ZP_03335005.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190356828|emb|CAQ54195.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995307|gb|EEB55948.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 326 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 186/321 (57%), Positives = 238/321 (74%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + F KEQ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV VG + + G Sbjct: 2 KAGNFTKEQVIGFYRKMLLIRRFEEKAGQLYGMGLIGGFCHLSIGQEAVAVGTQAASKPG 61 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D IT+YR+HG +LAC D + +MAEL G++ G SKGKGGSMH+F + F+GGHGIVGA Sbjct: 62 DAFITSYRDHGLMLACNSDPNVVMAELNGKETGCSKGKGGSMHIFDVEKNFFGGHGIVGA 121 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV +GTGIAFANKY++ D + FGDGAANQGQVYESFN+A+LW L V+Y+IENN+YAM Sbjct: 122 QVPIGTGIAFANKYKKKDNVVFTYFGDGAANQGQVYESFNMASLWKLPVVYIIENNEYAM 181 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R++ T KRG SF IPG QVDGMD +V + + R KGP+++EM TY Sbjct: 182 GTSVQRSTLVTELYKRGESFGIPGKQVDGMDFFSVYEVTSEIAEHVRGGKGPLLLEMKTY 241 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDPA YRT+EE+ +M+ NHDPI +++ + NK AS+ + K I+ +R ++ Sbjct: 242 RYRGHSMSDPATYRTKEEVEDMKQNHDPISNLKQYMKDNKIASDEECKAIDKEIRDLVKK 301 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 S +FA+S KEP+ ELY+D+ Sbjct: 302 SEDFAKSSKEPEIDELYTDVY 322 >gi|312114099|ref|YP_004011695.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Rhodomicrobium vannielii ATCC 17100] gi|311219228|gb|ADP70596.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhodomicrobium vannielii ATCC 17100] Length = 335 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 213/318 (66%), Positives = 266/318 (83%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 E ++++EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M++ EGDQ Sbjct: 16 PELSRDEELHAYREMLLIRRFEEKAGQLYGMGQIGGFCHLYIGQEAVVVGMQMTVREGDQ 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR+HGH+L CG+D +MAELTGR+GG S+GKGGSMHMFS + F+GGHGIVGAQV Sbjct: 76 VITAYRDHGHMLVCGMDPKGVMAELTGRRGGYSRGKGGSMHMFSVEKNFFGGHGIVGAQV 135 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LGTG+AFANKYR + + + +GDGAANQGQVYE+FN+A LW L V+YV+ENN+Y MGT Sbjct: 136 PLGTGLAFANKYRGNGNVSLTYYGDGAANQGQVYEAFNMAELWKLPVVYVVENNKYGMGT 195 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S++RASA TN S+RG SFNIPG QVDGMD+RAVK ++AVA+ RA KGP I+EMLTYRY Sbjct: 196 SINRASALTNLSQRGASFNIPGRQVDGMDVRAVKEAGEEAVAWARAGKGPYILEMLTYRY 255 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR++EE+++MR HDPIE VR+RL+ + A+E DLK I+ +R I+N + Sbjct: 256 RGHSMSDPAKYRSKEEVDKMRHEHDPIEMVRQRLIASDRATEDDLKAIDKEIRAIVNEAA 315 Query: 345 EFAQSDKEPDPAELYSDI 362 EFAQ+D EPD AELY+++ Sbjct: 316 EFAQTDPEPDVAELYTNV 333 >gi|254701872|ref|ZP_05163700.1| dehydrogenase E1 component [Brucella suis bv. 5 str. 513] gi|261752435|ref|ZP_05996144.1| dehydrogenase E1 component [Brucella suis bv. 5 str. 513] gi|261742188|gb|EEY30114.1| dehydrogenase E1 component [Brucella suis bv. 5 str. 513] Length = 346 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 227/345 (65%), Positives = 280/345 (81%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 + AK+A + + + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +G Sbjct: 2 APRAKKAPAGKTQASSVNAPKAPSPANFDKKQELEAYREMLLIRRFEEKAGQLYGMGFIG 61 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LA G+ A +MAELTGR+GG+SKG Sbjct: 62 GFCHLYIGQEAVVVGMQMALQEGDQVITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKG 121 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN YR + + + FGDGAANQGQVYE Sbjct: 122 KGGSMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYE 181 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 SFN+A+LW L VIYVIENN+YAMGT+VSR+SA+T+F KRG+SFNIPG+QVDGMD+RAVKA Sbjct: 182 SFNMASLWKLPVIYVIENNRYAMGTAVSRSSAETDFPKRGLSFNIPGIQVDGMDVRAVKA 241 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 D A + R+ KGPII+EMLTYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ Sbjct: 242 AADLATEWARSGKGPIILEMLTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLI 301 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LKEI+ VR I+ ++ +FA+ D EPD +ELY+DIL+ Sbjct: 302 EKGWATEEELKEIDREVRDIVADAADFAEHDPEPDASELYTDILL 346 >gi|23502007|ref|NP_698134.1| pyruvate dehydrogenase complex, E1 component subunit alpha [Brucella suis 1330] gi|161619081|ref|YP_001592968.1| dehydrogenase E1 component [Brucella canis ATCC 23365] gi|163843396|ref|YP_001627800.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Brucella suis ATCC 23445] gi|254704418|ref|ZP_05166246.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Brucella suis bv. 3 str. 686] gi|260566335|ref|ZP_05836805.1| dehydrogenase [Brucella suis bv. 4 str. 40] gi|261755095|ref|ZP_05998804.1| dehydrogenase E1 component [Brucella suis bv. 3 str. 686] gi|23347958|gb|AAN30049.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Brucella suis 1330] gi|161335892|gb|ABX62197.1| dehydrogenase E1 component [Brucella canis ATCC 23365] gi|163674119|gb|ABY38230.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Brucella suis ATCC 23445] gi|260155853|gb|EEW90933.1| dehydrogenase [Brucella suis bv. 4 str. 40] gi|261744848|gb|EEY32774.1| dehydrogenase E1 component [Brucella suis bv. 3 str. 686] Length = 346 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 227/345 (65%), Positives = 280/345 (81%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 + AK+A + + + F+K+QEL AYR MLLIRRFEEKAGQLYGM +G Sbjct: 2 APRAKKAPAGKTQASSVNAPKAPSPANFDKKQELEAYREMLLIRRFEEKAGQLYGMSFIG 61 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LA G+ A +MAELTGR+GG+SKG Sbjct: 62 GFCHLYIGQEAVVVGMQMALQEGDQVITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKG 121 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN YR + + + FGDGAANQGQVYE Sbjct: 122 KGGSMHMFSKEKNFYGGHGIVGAQVSLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYE 181 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 SFN+A+LW L VIYVIENN+YAMGT+VSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA Sbjct: 182 SFNMASLWKLPVIYVIENNRYAMGTAVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKA 241 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 D A + R+ KGPII+EMLTYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ Sbjct: 242 AADLATEWARSGKGPIILEMLTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLI 301 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WA+E +LKEI+ VR I+ ++ +FA+ D EPD +ELY+DIL+ Sbjct: 302 EKGWATEEELKEIDREVRDIVADAADFAEHDPEPDASELYTDILL 346 >gi|182678481|ref|YP_001832627.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Beijerinckia indica subsp. indica ATCC 9039] gi|182634364|gb|ACB95138.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 345 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 216/350 (61%), Positives = 263/350 (75%), Gaps = 7/350 (2%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 MA P S + EF E+E AYR MLL+RRFEEKAGQ+YG Sbjct: 1 MAAAPPTSRAKPTAGKPRS-------ASNTPEFTPEEERYAYRSMLLMRRFEEKAGQMYG 53 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 MG++GGFCHL IGQEAV+ G+ M+ EGDQ IT+YR+H H+LACG+D ++AELTGR+ Sbjct: 54 MGLIGGFCHLYIGQEAVVTGIMMAAKEGDQTITSYRDHAHMLACGLDPKGVLAELTGRRH 113 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+SKGKGGSMHMFS + FYGGHGIVGAQV LGTG+AFAN YR +D + V FGDGAANQ Sbjct: 114 GLSKGKGGSMHMFSREKHFYGGHGIVGAQVPLGTGLAFANWYRGNDNVSFVYFGDGAANQ 173 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 GQVYESFN+A LW L V+YVIENN+YAMGTSV+R+SA T+FSKRG SFNIPG QVDGMD+ Sbjct: 174 GQVYESFNMAELWKLPVVYVIENNRYAMGTSVTRSSALTDFSKRGQSFNIPGEQVDGMDV 233 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 RAV+A + AV +CR GPII+EM TYRYRGHSMSDPA YR++EE+ +MR HDPIEQV Sbjct: 234 RAVRAATEHAVEWCRGGNGPIILEMQTYRYRGHSMSDPAKYRSKEEVQKMREEHDPIEQV 293 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 + RLL A+E +LK I+ VR I+ + +FA D EPD +EL++DIL+ Sbjct: 294 KARLLGGNLATEDELKAIDAEVRAIVAEAADFATQDPEPDVSELWTDILV 343 >gi|326538856|gb|ADZ87071.1| dehydrogenase E1 component [Brucella melitensis M5-90] Length = 329 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 225/326 (69%), Positives = 275/326 (84%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 + + F+K+QEL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 4 PKAPSPANFDKKQELEAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMA 63 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L EGDQ+IT YR+HGH+LA G+ A +MAELTGR+GG+SKGKGGSMHMFS + FYGGHG Sbjct: 64 LQEGDQVITGYRDHGHMLAVGMSARGVMAELTGRRGGLSKGKGGSMHMFSKEKNFYGGHG 123 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVGAQVSLGTG+AFAN YR + + + FGDGAANQGQVYESFN+A+LW L VIYVIENN Sbjct: 124 IVGAQVSLGTGLAFANHYRENKSVSLTYFGDGAANQGQVYESFNMASLWKLPVIYVIENN 183 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YAMGT+VSR+SA+T+FSKRG+SFNIPG+QVDGMD+RAVKA D A + R+ KGPII+E Sbjct: 184 RYAMGTAVSRSSAETDFSKRGLSFNIPGIQVDGMDVRAVKAAADLATEWARSGKGPIILE 243 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 MLTYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL+ WA+E +LKEI+ VR Sbjct: 244 MLTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKNRLIEKGWATEEELKEIDREVRD 303 Query: 339 IINNSVEFAQSDKEPDPAELYSDILI 364 I+ ++ +FA+ D EPD +ELY+DIL+ Sbjct: 304 IVADAADFAEHDPEPDASELYTDILL 329 >gi|298291779|ref|YP_003693718.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Starkeya novella DSM 506] gi|296928290|gb|ADH89099.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Starkeya novella DSM 506] Length = 361 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 222/320 (69%), Positives = 272/320 (85%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 VSEF+K +EL AYR ML IRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+ +L EGD Sbjct: 41 VSEFSKAEELDAYRKMLEIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQAALKEGD 100 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++IT YR+HGH+LACG+D +MAELTGR+GG SKGKGGSMHMFS + GF+GGHGIVGAQ Sbjct: 101 EVITGYRDHGHMLACGMDPKGVMAELTGRRGGYSKGKGGSMHMFSIEKGFFGGHGIVGAQ 160 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTG+AFAN+YR +D + + FGDGAANQGQVYESFN+A LW L V+++IENN+YAMG Sbjct: 161 VSLGTGLAFANRYRDNDNVSLTYFGDGAANQGQVYESFNMAELWKLPVVFIIENNKYAMG 220 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+V+RASAQT+FSKRG SFNIPG QVDGMD+RAVKA +AV + R+ KGP I+EMLTYR Sbjct: 221 TAVNRASAQTDFSKRGTSFNIPGEQVDGMDVRAVKAAGARAVEFARSGKGPYILEMLTYR 280 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR++EE+ +MR+ HDPIEQVR RLL KWA+E +LK I+ +R +N + Sbjct: 281 YRGHSMSDPAKYRSKEEVQKMRTEHDPIEQVRNRLLEKKWATEEELKAIDAEIRDQMNAA 340 Query: 344 VEFAQSDKEPDPAELYSDIL 363 +FA +D EPD +ELY+D+L Sbjct: 341 ADFASADPEPDVSELYTDVL 360 >gi|114569965|ref|YP_756645.1| dehydrogenase, E1 component [Maricaulis maris MCS10] gi|114340427|gb|ABI65707.1| dehydrogenase, E1 component [Maricaulis maris MCS10] Length = 346 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 201/316 (63%), Positives = 257/316 (81%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K++ L YR ML++RRFEEKAGQLYGMG++ GFCHL IGQEAV+ G++ +L EGDQ+IT Sbjct: 29 KDELLQYYRDMLMMRRFEEKAGQLYGMGLIAGFCHLYIGQEAVVTGIQAALEEGDQVITG 88 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+H H+LACG+D +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGAQV+LGT Sbjct: 89 YRDHAHMLACGMDPKGVMAELTGREGGYSRGKGGSMHMFSREKQFYGGHGIVGAQVALGT 148 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+ FA+ Y+ + K+ V FGDGAANQGQVYESFN+A LWNL VIYVIENNQYAMGTSV R Sbjct: 149 GLGFADWYKGNGKLSVAYFGDGAANQGQVYESFNMAKLWNLPVIYVIENNQYAMGTSVKR 208 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 AS++T KRG+SF IPG +VDGMD+ AVK +KAV + R GP I+EM TYRYRGHS Sbjct: 209 ASSETALHKRGISFGIPGEEVDGMDVEAVKRAAEKAVKHARGGNGPYILEMKTYRYRGHS 268 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YRTREE++++RS+HDPI+ ++KRL+ A+E +LK ++ +V+ I+N + +FA+ Sbjct: 269 MSDPAKYRTREEVDDIRSHHDPIDLIKKRLVEGGHATEDELKALDKDVKAIVNEAAQFAK 328 Query: 349 SDKEPDPAELYSDILI 364 EPDP+ELY+D+L+ Sbjct: 329 DSPEPDPSELYTDVLV 344 >gi|254487912|ref|ZP_05101117.1| pyruvate dehydrogenase E1 component, alpha subunit [Roseobacter sp. GAI101] gi|214044781|gb|EEB85419.1| pyruvate dehydrogenase E1 component, alpha subunit [Roseobacter sp. GAI101] Length = 336 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 194/324 (59%), Positives = 250/324 (77%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + + E+ + Y+ MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KPTKKTNASAEELKAYYKDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEATA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD IT YR+HGH+LACG++ +MAELTGR+GG S+GKGGSMHMFS + FYGGHGI Sbjct: 65 KEGDSRITTYRDHGHMLACGMNPDGVMAELTGREGGYSRGKGGSMHMFSKEKKFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGA V LG G+AFA+KY+ +D + FGDGAANQGQVYE+FN+AALW L VI+VIENNQ Sbjct: 125 VGANVPLGAGVAFADKYKGNDNVTFTYFGDGAANQGQVYETFNMAALWKLPVIFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTS R+++ +RG +F IPG VDGMD+ AVK ++AV + R+ GP I+E+ Sbjct: 185 YAMGTSQQRSTSSAEIWERGKAFGIPGEAVDGMDVLAVKDAGERAVKHARSGDGPYILEI 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR DPIEQVR LL +K+A+E DLK I+ ++K+ Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMRDERDPIEQVRNILLESKYATEDDLKAIDKEIKKV 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N+S EFA++ EP P EL++DI Sbjct: 305 VNDSAEFAKNSPEPAPEELWTDIY 328 >gi|86749888|ref|YP_486384.1| pyruvate dehydrogenase alpha subunit [Rhodopseudomonas palustris HaA2] gi|86572916|gb|ABD07473.1| Pyruvate dehydrogenase alpha subunit [Rhodopseudomonas palustris HaA2] Length = 344 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 234/343 (68%), Positives = 283/343 (82%), Gaps = 1/343 (0%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 + K++A P V +F+KEQEL A+R MLLIRRFEEKAGQLYGMG +GG Sbjct: 2 AAPKKSAAKEAGQDKDPAPNKPRVPDFSKEQELRAFRDMLLIRRFEEKAGQLYGMGAIGG 61 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LAC +DA +MAELTGR+GG SKGK Sbjct: 62 FCHLYIGQEAVVVGMQMALREGDQVITGYRDHGHMLACDMDAKGVMAELTGRRGGYSKGK 121 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMFS + FYGGHGIVGAQVSLGTGIAFAN+YR + +C+ FGDGA+NQGQVYES Sbjct: 122 GGSMHMFSMEKHFYGGHGIVGAQVSLGTGIAFANRYRDNGSVCLAYFGDGASNQGQVYES 181 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A LW L V+YVIENN+YAMGTSV+R+SAQT+FSKRG+SFNIPG QVDGMD+RAVKA Sbjct: 182 FNMAELWKLPVVYVIENNRYAMGTSVTRSSAQTDFSKRGISFNIPGEQVDGMDVRAVKAA 241 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 DKAVA+CRA GP I+EM TYRYRGHSMSDPA YRTREE++++R++ DPIEQVR+RLL Sbjct: 242 GDKAVAHCRAGNGPYILEMQTYRYRGHSMSDPAKYRTREEVDKIRNDQDPIEQVRQRLLG 301 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +E DLK+I+ +RKI+N + +FAQ+D EPDPAELY+D+ Sbjct: 302 QD-MTEDDLKKIDAEIRKIVNEAADFAQNDPEPDPAELYTDVY 343 >gi|319404087|emb|CBI77675.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella rochalimae ATCC BAA-1498] Length = 346 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 217/342 (63%), Positives = 276/342 (80%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 AK+++ S+V + +++ F KE+E+ AYR MLLIRRFEEKAGQLYGMG++GGFC Sbjct: 5 AKKSSMSTVYAGSSDTTKTAQIANFTKEEEIDAYREMLLIRRFEEKAGQLYGMGLIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAVI G + GDQ+IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGG Sbjct: 65 HLYIGQEAVITGTLKATKAGDQIITSYRDHGHMLAAGMSPRGVMAELTGRQGGFSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQV +G+G+AF+N+Y D + +V FGDGAANQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVPIGSGLAFSNQYLGKDNVTLVYFGDGAANQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +AALW L VIY+IENNQYAMGTSVSRASA+T+FS+RG+SF+IPG+ VDGMD+RAVK D Sbjct: 185 MAALWKLPVIYIIENNQYAMGTSVSRASAETDFSRRGLSFDIPGIAVDGMDVRAVKKAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 +A+ + R+ KGPII++M TYRYRGHSMSDPA YR++EE+ +++S HDPI QV+ RL+ Sbjct: 245 EAIVWARSGKGPIILDMQTYRYRGHSMSDPAKYRSKEEVEKIKSEHDPINQVKNRLIKQG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WASE DLK I+ VR I+ ++ +FAQ+D EPD +ELY+DIL+ Sbjct: 305 WASEDDLKFIDKEVRAIVADAADFAQNDLEPDSSELYTDILV 346 >gi|209885407|ref|YP_002289264.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Oligotropha carboxidovorans OM5] gi|209873603|gb|ACI93399.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Oligotropha carboxidovorans OM5] Length = 339 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 228/346 (65%), Positives = 276/346 (79%), Gaps = 12/346 (3%) Query: 18 NPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 PS +A + AT++ + EF KEQEL+A R MLLIRRFEEKAGQLYGMG Sbjct: 5 KPSAAATKGATANATKL-----------EFTKEQELTALRDMLLIRRFEEKAGQLYGMGA 53 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 +GGFCHL IGQEAV+VGM+M L EGDQ+IT YR+HGH+LA G+D +MAELTGR+ G S Sbjct: 54 IGGFCHLYIGQEAVVVGMQMVLKEGDQVITGYRDHGHMLATGMDPKGVMAELTGRRSGYS 113 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHMFS + FYGGHGIVGAQV LGTG+AFAN+YR +D + + FGDGAANQGQV Sbjct: 114 KGKGGSMHMFSKEKHFYGGHGIVGAQVPLGTGLAFANRYRGNDNVAIAYFGDGAANQGQV 173 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 YESFN+A LW L V+YVIENN+YAMGT+V+RASAQT+FSKRG SFNIPG QVDGMD+RAV Sbjct: 174 YESFNMAELWKLPVVYVIENNRYAMGTAVTRASAQTDFSKRGASFNIPGEQVDGMDVRAV 233 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 +A ++AV +CR KGP I+EM TYRYRGHSMSDPA YRTREE+ ++R + DPIEQVRKR Sbjct: 234 RAAGERAVGWCREGKGPFILEMQTYRYRGHSMSDPAKYRTREEVEKVRHDQDPIEQVRKR 293 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 LL K E +LK+I+ VR+I+N++ +FAQ D EPD +ELY+D+ Sbjct: 294 LLAAKV-DEAELKKIDAEVREIVNDAADFAQHDPEPDVSELYTDVY 338 >gi|149913852|ref|ZP_01902384.1| anhydro-N-acetylmuramic acid kinase [Roseobacter sp. AzwK-3b] gi|149812136|gb|EDM71967.1| anhydro-N-acetylmuramic acid kinase [Roseobacter sp. AzwK-3b] Length = 336 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 196/319 (61%), Positives = 244/319 (76%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + ++ YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ Sbjct: 10 PNVSADELKQYYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEATAEEGDK 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 IT YR+HGH+LACG+D +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGA V Sbjct: 70 RITTYRDHGHMLACGMDPKGVMAELTGREGGYSRGKGGSMHMFSKEKHFYGGHGIVGANV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AFA+KY +D++ FGDGAANQGQVYE+FN+AALW L VI+VIENNQYAMGT Sbjct: 130 PLGAGLAFADKYLGNDRVTYTYFGDGAANQGQVYETFNMAALWQLPVIFVIENNQYAMGT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S R+++ + RG +F IPG VDGMD+ AV+ KAVA+CR+ KGP I+E+ TYRY Sbjct: 190 SQKRSTSSPDIYTRGAAFGIPGEAVDGMDVLAVRDAGQKAVAHCRSGKGPYILEIKTYRY 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE+ +MR D IE VR LL K A+E DLK I+ ++ I+N + Sbjct: 250 RGHSMSDPAKYRTREEVQKMREEKDAIEHVRDLLLSGKHATEDDLKAIDKEIKAIVNEAA 309 Query: 345 EFAQSDKEPDPAELYSDIL 363 EF++ EPDPAEL++DI Sbjct: 310 EFSKDSPEPDPAELWTDIY 328 >gi|319405529|emb|CBI79148.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella sp. AR 15-3] Length = 346 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 215/342 (62%), Positives = 273/342 (79%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 AK+ + S+V + +++ F KE+E+ AYR MLLIRRFEEKAGQLYGMG++GGFC Sbjct: 5 AKKNSMSTVYAASSDTTKTAKIANFTKEEEIDAYREMLLIRRFEEKAGQLYGMGLIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAV+ G + GDQ+IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGG Sbjct: 65 HLYIGQEAVVTGTLKATKVGDQIITSYRDHGHMLAAGMSPRGVMAELTGRQGGFSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQV +G+G+AFAN+Y D + +V FGDGAANQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVPIGSGLAFANQYLGKDNVTLVYFGDGAANQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A+LW L VIY+IENNQYAMGTSVSRASA+T+FS+RG+SF IPG+ VDGMD+RAVK D Sbjct: 185 MASLWKLPVIYIIENNQYAMGTSVSRASAETDFSRRGLSFEIPGIAVDGMDVRAVKGAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 +A+ + R+ KGPII++M TYRYRGHSMSDPA YR++EE+ +++S DPI QV+ RL+ Sbjct: 245 EAIIWARSGKGPIILDMQTYRYRGHSMSDPAKYRSKEEVEKIKSEQDPINQVKSRLIKQG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WASE DLK I+ VR I+ ++ +FAQ+D EPD +ELY+DIL+ Sbjct: 305 WASEDDLKFIDKEVRAIVADAADFAQNDPEPDSSELYTDILV 346 >gi|325292760|ref|YP_004278624.1| pyruvate dehydrogenase E1 component, subunit alpha [Agrobacterium sp. H13-3] gi|325060613|gb|ADY64304.1| pyruvate dehydrogenase E1 component, alpha subunit [Agrobacterium sp. H13-3] Length = 347 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 228/324 (70%), Positives = 277/324 (85%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G +F+KE+EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+MS Sbjct: 24 GKNSPDFSKEEELHAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMSQK 83 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 EGDQ+ITAYR+HGH+LA G+ A +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIV Sbjct: 84 EGDQVITAYRDHGHMLALGMSARGVMAELTGRKGGLSKGKGGSMHMFSKEKHFYGGHGIV 143 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFANKYR +D + V FGDGAANQGQVYESFN+AALW L +IY++ENN+Y Sbjct: 144 GAQVSLGTGLAFANKYRGNDNVSVTYFGDGAANQGQVYESFNMAALWKLPIIYIVENNRY 203 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS +RA+AQ+N+S RG SF IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EML Sbjct: 204 AMGTSTARATAQSNYSLRGQSFGIPGIQVDGMDVRAVKAAADQALEHCRSGKGPIILEML 263 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YR+++E+ +MRS HDPIEQV+ RLL WASE +LK I+ +VR I+ Sbjct: 264 TYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVKARLLEQGWASEDELKAIDKDVRDIV 323 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +S +FAQ+D EPD +ELY+DIL+ Sbjct: 324 ADSADFAQNDPEPDVSELYTDILL 347 >gi|319898763|ref|YP_004158856.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella clarridgeiae 73] gi|319402727|emb|CBI76274.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella clarridgeiae 73] Length = 346 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 218/350 (62%), Positives = 274/350 (78%), Gaps = 7/350 (2%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 A SVS AA S + +++ F KE+E+ AYR MLLIRRFEEKAGQLYG Sbjct: 4 RAKKNSVSIVHAALSDT-------TKTAQIANFTKEEEIDAYREMLLIRRFEEKAGQLYG 56 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 MG++GGFCHL IGQEAVI G + GDQ+IT+YR+HGH+LA G+ +MAELTGRQG Sbjct: 57 MGLIGGFCHLYIGQEAVITGTLKATKAGDQIITSYRDHGHMLAAGMSPRGVMAELTGRQG 116 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G SKGKGGSMHMFS + FYGGHGIVGAQV +G+G+AF+N+Y + + +V FGDGAANQ Sbjct: 117 GFSKGKGGSMHMFSKEKNFYGGHGIVGAQVPIGSGLAFSNQYLGKNNVTLVYFGDGAANQ 176 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 GQVYESFN+A+LW L VIY+IENNQYAMGTSVSRASA+T+FS+RG+SF IPG+ VDGMD+ Sbjct: 177 GQVYESFNMASLWKLPVIYIIENNQYAMGTSVSRASAETDFSRRGLSFEIPGIAVDGMDV 236 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 RAVK D+A+ + R+ KGPII++M TYRYRGHSMSDPA YR++EE+ +++S HDPI QV Sbjct: 237 RAVKGAADEAIVWARSGKGPIILDMQTYRYRGHSMSDPAKYRSKEEVEKIKSEHDPINQV 296 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 + RL+ WASE DLK I+ VR I+ ++ +FAQ+D EPD +ELY+DIL+ Sbjct: 297 KNRLIKRDWASEDDLKSIDKEVRAIVADAADFAQNDPEPDSSELYTDILV 346 >gi|163760091|ref|ZP_02167174.1| putative pyruvate dehydrogenase subunit [Hoeflea phototrophica DFL-43] gi|162282490|gb|EDQ32778.1| putative pyruvate dehydrogenase subunit [Hoeflea phototrophica DFL-43] Length = 345 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 221/321 (68%), Positives = 275/321 (85%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++EF+K+ EL AYR ML+IRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+MSL +GD Sbjct: 25 ITEFSKDAELEAYREMLMIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMSLKDGD 84 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q+IT YR+HGH+LA G++A +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVG Q Sbjct: 85 QVITGYRDHGHMLATGMEARGVMAELTGRRGGYSRGKGGSMHMFSKEKNFYGGHGIVGGQ 144 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTG+AFAN+YR +D + + FGDGAANQGQVYESFN+AALW L V+Y++ENN+YAMG Sbjct: 145 VSLGTGLAFANRYRGNDNVSLTYFGDGAANQGQVYESFNMAALWKLPVVYIVENNRYAMG 204 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TS+ R+SAQ+NFS RG SF IPG QVDGMD+RAV A ++AVA+CRA KGPII+EMLTYR Sbjct: 205 TSIERSSAQSNFSLRGNSFGIPGHQVDGMDVRAVHAAGEEAVAHCRAGKGPIILEMLTYR 264 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YRT++E+ +MR+ HDPIEQV+ R+L K ASE DLK I+ N+R ++ +S Sbjct: 265 YRGHSMSDPAKYRTKDEVQKMRAEHDPIEQVKARILEMKHASEDDLKAIDKNIRDVVADS 324 Query: 344 VEFAQSDKEPDPAELYSDILI 364 +FAQ++ EPD +ELY+DIL+ Sbjct: 325 ADFAQANPEPDASELYTDILL 345 >gi|328543939|ref|YP_004304048.1| Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [polymorphum gilvum SL003B-26A1] gi|326413683|gb|ADZ70746.1| Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit [Polymorphum gilvum SL003B-26A1] Length = 350 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 223/350 (63%), Positives = 276/350 (78%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 MA A + ++ ++EF++++EL AYR MLLIRRFEEKAGQLYG Sbjct: 1 MAATKKTPAGTRSKAAPRPRGAAKSAAPAIAEFSRDEELHAYREMLLIRRFEEKAGQLYG 60 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 MG++GGFCHL IGQEAV+VGM+M+ T+GDQMIT YR+HGH+LA +D +MAELTGR+G Sbjct: 61 MGLIGGFCHLYIGQEAVVVGMQMAKTDGDQMITGYRDHGHMLAMDLDPKGVMAELTGRRG 120 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+SKGKGGSMHMFS + FYGGHGIVGAQVSLGTGIAFAN+Y + + + FGDGA+NQ Sbjct: 121 GLSKGKGGSMHMFSKEKHFYGGHGIVGAQVSLGTGIAFANQYTGNGNVAMTFFGDGASNQ 180 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 GQVYESFN+A LW L VIYVIENN+Y MGTSV RAS+ T+ S+RG SF IPG QVDGMD+ Sbjct: 181 GQVYESFNMAQLWKLPVIYVIENNKYGMGTSVERASSTTDLSQRGASFGIPGEQVDGMDV 240 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 RAVKA DKA+A+CR GP I+EM+TYRYRGHSMSDPA YR+++E+ +MR+ DPIEQV Sbjct: 241 RAVKAASDKALAWCREGNGPYILEMVTYRYRGHSMSDPAKYRSKDEVQKMRTERDPIEQV 300 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 R RL+ N WASE DLK I+ +VR ++ + EFAQ+D EPDP+ELY+DIL+ Sbjct: 301 RARLIENDWASEDDLKAIDKDVRALVAEAAEFAQTDPEPDPSELYTDILL 350 >gi|42520291|ref|NP_966206.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Wolbachia endosymbiont of Drosophila melanogaster] gi|99034777|ref|ZP_01314700.1| hypothetical protein Wendoof_01000476 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] gi|225677281|ref|ZP_03788263.1| pyruvate dehydrogenase complex, E1 component [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|42410029|gb|AAS14140.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Wolbachia endosymbiont of Drosophila melanogaster] gi|225590673|gb|EEH11918.1| pyruvate dehydrogenase complex, E1 component [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 326 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 189/321 (58%), Positives = 239/321 (74%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + F KEQ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV VG + + G Sbjct: 2 KAENFTKEQIIGFYRKMLLIRRFEEKAGQLYGMGLIGGFCHLSIGQEAVAVGTQAASKLG 61 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D IT+YR+HG +LAC D + +MAELTG++ G SKGKGGSMH+F + F+GGHGIVGA Sbjct: 62 DAFITSYRDHGLMLACDSDPNVVMAELTGKETGCSKGKGGSMHVFDVEKKFFGGHGIVGA 121 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV +GTGIAFANKY++ D + FGDGAANQGQVYESFN+A+LW L V+Y+IENN+YAM Sbjct: 122 QVPIGTGIAFANKYKKKDNVVFTYFGDGAANQGQVYESFNMASLWELPVVYIIENNEYAM 181 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R++ T KRG SF IPG QVDGMD +V +A + R+ KGPI++EM TY Sbjct: 182 GTSVQRSTLVTELYKRGESFGIPGKQVDGMDFFSVYEATSEAAEHTRSGKGPILLEMKTY 241 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDPA YR +EE+ +M+ NHDPI ++K + NK ASE + K I+ +R ++ Sbjct: 242 RYRGHSMSDPATYRLKEEVEDMKQNHDPISTLKKYMTDNKMASEEECKVIDKEIRDLVKK 301 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 S +FA++ KEP ELY+D+ Sbjct: 302 SEDFAKNSKEPSVDELYTDVY 322 >gi|254294050|ref|YP_003060073.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Hirschia baltica ATCC 49814] gi|254042581|gb|ACT59376.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Hirschia baltica ATCC 49814] Length = 339 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 206/316 (65%), Positives = 260/316 (82%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + E+ L YR MLLIRRFEEKAGQLYGMG++ GFCHL IGQEAV+VG++ +L EGDQ+IT Sbjct: 21 SNEEMLKYYRDMLLIRRFEEKAGQLYGMGLIAGFCHLYIGQEAVVVGVQSALIEGDQVIT 80 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+HGH+LAC ++A +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGAQVSLG Sbjct: 81 GYRDHGHMLACDMEADGVMAELTGREGGYSRGKGGSMHMFSKEKNFYGGHGIVGAQVSLG 140 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFAN+Y+++ + V FGDGAANQGQVYESFN+A+LW L +YVIENNQYAMGT+VS Sbjct: 141 TGLAFANQYKKNGNVSVSYFGDGAANQGQVYESFNMASLWKLPALYVIENNQYAMGTAVS 200 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RASA+ KRG+SF+IPG VDGMD+ V+ KA+ + R+ KGP I+EM TYRYRGH Sbjct: 201 RASAEQELYKRGISFDIPGEAVDGMDVLKVREAALKAIEHIRSGKGPYILEMKTYRYRGH 260 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR REE++++RS+HDPIE ++K+L+ +K ASE DLK I+ VR I+N S +FA Sbjct: 261 SMSDPAKYRKREEVDDIRSHHDPIEGLKKQLIESKIASEEDLKVIDKEVRVIVNKSADFA 320 Query: 348 QSDKEPDPAELYSDIL 363 Q+ EPDP+EL++D+L Sbjct: 321 QTSPEPDPSELWTDVL 336 >gi|225630143|ref|YP_002726934.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Wolbachia sp. wRi] gi|225592124|gb|ACN95143.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Wolbachia sp. wRi] Length = 326 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 189/321 (58%), Positives = 239/321 (74%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + F KEQ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV VG + + G Sbjct: 2 KAENFTKEQIIGFYRKMLLIRRFEEKAGQLYGMGLIGGFCHLSIGQEAVAVGTQAASKLG 61 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D IT+YR+HG +LAC D + +MAELTG++ G SKGKGGSMH+F + F+GGHGIVGA Sbjct: 62 DAFITSYRDHGLMLACDSDPNVVMAELTGKETGCSKGKGGSMHVFDVEKKFFGGHGIVGA 121 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV +GTGIAFANKY++ D + FGDGAANQGQVYESFN+A+LW L V+Y+IENN+YAM Sbjct: 122 QVPIGTGIAFANKYKKKDNVVFTYFGDGAANQGQVYESFNMASLWELPVVYIIENNEYAM 181 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R++ T KRG SF IPG QVDGMD +V +A + R+ KGPI++EM TY Sbjct: 182 GTSVQRSTLVTELYKRGESFGIPGKQVDGMDFFSVYEATSEAAEHTRSGKGPILLEMKTY 241 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDPA YR +EE+ +M+ NHDPI ++K + NK ASE + K I+ +R ++ Sbjct: 242 RYRGHSMSDPATYRLKEEVEDMKQNHDPISTLKKYMTDNKMASEEECKIIDKEIRDLVKK 301 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 S +FA++ KEP ELY+D+ Sbjct: 302 SEDFAKNSKEPSVDELYTDVY 322 >gi|240850261|ref|YP_002971654.1| pyruvate dehydrogenase subunit alpha [Bartonella grahamii as4aup] gi|240267384|gb|ACS50972.1| pyruvate dehydrogenase subunit alpha [Bartonella grahamii as4aup] Length = 346 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 212/341 (62%), Positives = 275/341 (80%) Query: 24 KRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCH 83 K+ + S + +++F KE+E+ AYR MLLIRRFEEKAGQLYGMG++GGFCH Sbjct: 6 KKNSASVARTALSSTTKKAPIADFTKEEEIDAYREMLLIRRFEEKAGQLYGMGLIGGFCH 65 Query: 84 LCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGS 143 L IGQEAV++G + EGDQ+IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGGS Sbjct: 66 LYIGQEAVVIGTLKAAKEGDQVITSYRDHGHMLAVGMSPRGVMAELTGRQGGFSKGKGGS 125 Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 MHMFS + FYGGHGIVGAQV +G+G+AF+N+Y D + +V FGDGAANQGQVYESFN+ Sbjct: 126 MHMFSKEKNFYGGHGIVGAQVPIGSGLAFSNRYLGKDNVTLVYFGDGAANQGQVYESFNM 185 Query: 204 AALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 A+LW L V+Y+IENNQYAMGTSVSRASA+T+FS+RG+SF IPG+ VDGMD+R+VK D+ Sbjct: 186 ASLWKLPVVYIIENNQYAMGTSVSRASAETDFSRRGLSFEIPGIVVDGMDVRSVKGAADE 245 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 A+++ R+ KGPII++M TYRYRGHSMSDPA YR++EE+ +++ HDPI+QV+ R+L W Sbjct: 246 AISWARSGKGPIILDMQTYRYRGHSMSDPAKYRSKEEVQKIKEEHDPIDQVKSRILKKNW 305 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 A+E DLK IE VR I+ ++ +FAQSD+EPD +ELY+DIL+ Sbjct: 306 ANEDDLKSIEKEVRAIVADAADFAQSDQEPDASELYTDILV 346 >gi|58584467|ref|YP_198040.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase E1 component, alpha subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418783|gb|AAW70798.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase E1 component, eukaryotic type, alpha subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 329 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 185/321 (57%), Positives = 240/321 (74%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + F KEQ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV VG + G Sbjct: 2 KAENFTKEQVIEFYRKMLLIRRFEEKAGQLYGMGLIGGFCHLSIGQEAVAVGTYAASRPG 61 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D +T+YR+HG +LAC + +MAELTG++ G SKGKGGSMH+F + F+GGHGIVGA Sbjct: 62 DAFVTSYRDHGLMLACDSNPDVVMAELTGKETGCSKGKGGSMHIFDVEKQFFGGHGIVGA 121 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV +GTGIAFAN+Y++ D + FGDGAANQGQVYESFN+A+LW L V+Y+IENN+YAM Sbjct: 122 QVPIGTGIAFANRYKKKDNVVFTYFGDGAANQGQVYESFNMASLWKLPVVYIIENNEYAM 181 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R++ T KRG SF IPG QV+GMD +V A +A Y R+ KGPI++EM TY Sbjct: 182 GTSVQRSTLVTELYKRGESFGIPGKQVNGMDFFSVYAATSEAAEYARSGKGPILLEMETY 241 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDPA YR++EE+ +M+ NHDPI ++K ++ NK ASE + K I+ +R ++ Sbjct: 242 RYRGHSMSDPATYRSKEEVEDMKQNHDPISTLKKCIIDNKIASEEECKAIDKEIRDLVKK 301 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 S F+++ +EP+ ELY+D+ Sbjct: 302 SEGFSKNSEEPNIDELYTDVY 322 >gi|13470619|ref|NP_102188.1| pyruvate dehydrogenase E1 alpha subunit [Mesorhizobium loti MAFF303099] gi|14021361|dbj|BAB47974.1| pyruvate dehydrogenase E1 alpha subunit [Mesorhizobium loti MAFF303099] Length = 345 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 227/342 (66%), Positives = 278/342 (81%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 +A R A + L + +EF K++EL+AYR MLLIRRFEEKAGQLYGMG +GG Sbjct: 2 ATAARKAPAKSKSEGKSGLSAPKPAEFTKDEELAAYRHMLLIRRFEEKAGQLYGMGFIGG 61 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL IGQEAV+ GMKM+L +GDQMITAYR+HGH+LA + +MAELTGR+GG+SKGK Sbjct: 62 FCHLYIGQEAVVTGMKMALIDGDQMITAYRDHGHMLAMELSPRGVMAELTGRRGGLSKGK 121 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR ++ + + FGDGAANQGQVYES Sbjct: 122 GGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRDNNNVSLTYFGDGAANQGQVYES 181 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A+LW L VIY+IENN+YAMGTSVSR+SA+TNFS RG SF IPG+QVDGMD+RAVK+ Sbjct: 182 FNMASLWKLPVIYIIENNRYAMGTSVSRSSAETNFSHRGASFKIPGIQVDGMDVRAVKSA 241 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 D+A +CRA GPII+EM TYRYRGHSMSDPA YR++EE+ +MRS HDPIEQV+ RL Sbjct: 242 GDQATEWCRAGNGPIILEMQTYRYRGHSMSDPAKYRSKEEVQKMRSEHDPIEQVKARLTE 301 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 KWA+E +LK I+ VR I+ ++ EFAQ+D EPDP+EL++DI Sbjct: 302 KKWATEDELKTIDKEVRDIVADAAEFAQNDAEPDPSELWTDI 343 >gi|75676010|ref|YP_318431.1| dehydrogenase, E1 component [Nitrobacter winogradskyi Nb-255] gi|74420880|gb|ABA05079.1| dehydrogenase, E1 component [Nitrobacter winogradskyi Nb-255] Length = 342 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 223/319 (69%), Positives = 271/319 (84%), Gaps = 1/319 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 F +EQ+L A R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEA++VGM+M+L EGDQ Sbjct: 24 PSFTREQDLHALREMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAIVVGMQMALGEGDQ 83 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT YR+HGH+LACG+DA +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGAQV Sbjct: 84 VITGYRDHGHMLACGMDAKGVMAELTGRRGGYSRGKGGSMHMFSKEKHFYGGHGIVGAQV 143 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 SLGTG+AFAN+YR +D++ + FGDGAANQGQVYESFN+A LW L V+Y+IENN+YAMGT Sbjct: 144 SLGTGLAFANRYRGNDRVSLTYFGDGAANQGQVYESFNMAQLWKLPVVYIIENNRYAMGT 203 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV+R+SAQ +FS+RGVSF+IPG QVDGMD+RAVKA DKAV +CR GP I+EM TYRY Sbjct: 204 SVARSSAQIDFSRRGVSFDIPGEQVDGMDVRAVKAAGDKAVKWCREGNGPYILEMQTYRY 263 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE++++R + DPIEQVR RLL +K SE +LK+I+ VR+IIN + Sbjct: 264 RGHSMSDPAKYRTREEVDKVRHDQDPIEQVRNRLLASKV-SEDELKKIDAKVREIINTAA 322 Query: 345 EFAQSDKEPDPAELYSDIL 363 +FAQ+D EPD +ELY+DI Sbjct: 323 DFAQNDPEPDASELYTDIY 341 >gi|83954327|ref|ZP_00963047.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Sulfitobacter sp. NAS-14.1] gi|83841364|gb|EAP80534.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Sulfitobacter sp. NAS-14.1] Length = 336 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 195/324 (60%), Positives = 247/324 (76%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + + E+ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KPTKKTNASAEELKAYYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEATT 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +GD IT YR+HGH+LACG++ +MAELTGR+GG S+GKGGSMHMFS + FYGGHGI Sbjct: 65 KDGDSRITTYRDHGHMLACGMNPDGVMAELTGREGGYSRGKGGSMHMFSKEKKFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGA V LG GIAFA+KY+ +D + FGDGAANQGQVYE+FN+AALW L VI++IENNQ Sbjct: 125 VGANVPLGAGIAFADKYKGNDNVTFTYFGDGAANQGQVYETFNMAALWKLPVIFIIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTS R+++ +RG +F IPG VDGMD+ AVK ++AV +CR+ GP I+E+ Sbjct: 185 YAMGTSQQRSTSSAEIWERGKAFGIPGEAVDGMDVLAVKDAGERAVKHCRSGDGPYILEI 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR DPIEQVR LL +K ASE DLK I+ +++I Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMRDERDPIEQVRNILLEHKHASEDDLKAIDKEIKEI 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N S EFA+ EP EL++DI Sbjct: 305 VNASAEFAKESPEPAAEELWTDIY 328 >gi|94498560|ref|ZP_01305115.1| Pyruvate dehydrogenase (lipoamide) [Sphingomonas sp. SKA58] gi|94422003|gb|EAT07049.1| Pyruvate dehydrogenase (lipoamide) [Sphingomonas sp. SKA58] Length = 357 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 193/332 (58%), Positives = 252/332 (75%), Gaps = 2/332 (0%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 + P E E +K++ L Y+ M+LIRRFEEKAGQLYG+G++GGFCHL IGQEAV V Sbjct: 24 HNRPRPETPSDYEASKDELLDFYKQMVLIRRFEEKAGQLYGLGLIGGFCHLYIGQEAVAV 83 Query: 94 GMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG 152 G++ +L G D +IT YR+HGH+LA G+D IMAELTGR+ GIS+GKGGSMHMFS ++ Sbjct: 84 GIQSALKPGKDSVITGYRDHGHMLAYGIDPKIIMAELTGREAGISRGKGGSMHMFSVEHK 143 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 FYGGHGIVGAQVSLG G+ FA+KY +CV FGDGAANQGQVYE+FN+A LW L +I Sbjct: 144 FYGGHGIVGAQVSLGAGLGFAHKYNDDGGVCVAYFGDGAANQGQVYEAFNMAELWKLPII 203 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +VIENNQYAMGTSV+RAS++ +RG SF IPG+QV+GMD+ AV+ ++A+ + + Sbjct: 204 FVIENNQYAMGTSVNRASSEDQLYRRGESFRIPGIQVNGMDVLAVRGATEEALKWVQGGN 263 Query: 273 GPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 GPI++EM TYRYRGHSMSDPA YR+REE+ MR DPIE V+K L+ E ++K I Sbjct: 264 GPILLEMKTYRYRGHSMSDPAKYRSREEVQSMRDTSDPIEGVKKYLIEAGV-GEDEIKSI 322 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 + N+RK ++ + +FA++ EPD AELY+D+L+ Sbjct: 323 DQNIRKTVSEAADFAETSPEPDMAELYTDVLV 354 >gi|319408349|emb|CBI82002.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella schoenbuchensis R1] Length = 346 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 205/342 (59%), Positives = 271/342 (79%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 AK+ + + + + + F K++ ++ YR MLLIRRFEE+AGQLYGMG++GGFC Sbjct: 5 AKKKSAPVMQATLSNVTKTAKKASFTKDETIAVYREMLLIRRFEERAGQLYGMGLIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAV+VG + EGDQ+IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGG Sbjct: 65 HLYIGQEAVVVGTLKASKEGDQIITSYRDHGHMLAAGMSPRGVMAELTGRQGGFSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQV +GTG+AF+N+Y D + +V FGDGAANQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVPIGTGLAFSNQYLGKDNVTLVYFGDGAANQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A+LW L V+Y+IENNQYAMGTSVSRASA+T+FS+RG+SF IPG+ VDGMD+ AVK D Sbjct: 185 MASLWKLPVVYIIENNQYAMGTSVSRASAETDFSRRGLSFEIPGIVVDGMDVHAVKGAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 +A+A+ R+ KGPII++M TYRYRGHSMSDPA YR++EE+ +++ DPI+Q+++ ++ Sbjct: 245 EAIAWARSGKGPIILDMQTYRYRGHSMSDPAKYRSKEEVQKIKEEQDPIDQIKQHVIKQG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 W SE DLK I+ VR I+ ++ +FAQ+D+EPD +ELY+DIL+ Sbjct: 305 WVSEDDLKSIDKEVRAIVADAADFAQNDQEPDASELYTDILV 346 >gi|49475368|ref|YP_033409.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella henselae str. Houston-1] gi|20465205|gb|AAL74287.1| pyruvate dehydrogenase E1 component alpha subunit [Bartonella henselae str. Houston-1] gi|49238174|emb|CAF27383.1| Pyruvate dehydrogenase E1 component, alpha subunit [Bartonella henselae str. Houston-1] Length = 346 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 210/326 (64%), Positives = 270/326 (82%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 + +++ F KE+E+ AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV++G + Sbjct: 21 TKKAKIANFTKEEEIDAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVIGTLKA 80 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 EGDQ+IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGGSMHMFS + FYGGHG Sbjct: 81 AKEGDQVITSYRDHGHMLAVGMSPRGVMAELTGRQGGFSKGKGGSMHMFSKEKNFYGGHG 140 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVGAQV +G+G+AF+N+Y D + +V FGDGAANQGQVYESFN+A+LW L V+Y+IENN Sbjct: 141 IVGAQVPIGSGLAFSNQYLGKDNVTLVYFGDGAANQGQVYESFNMASLWKLPVVYIIENN 200 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 QYAMGTSV+RASA+T+FS+RG+SF IPG+ VDGMD+RAVK D+A+ + R+ KGPII++ Sbjct: 201 QYAMGTSVARASAETDFSRRGLSFEIPGIVVDGMDVRAVKGAADEAITWTRSGKGPIILD 260 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 M TYRYRGHSMSDPA YR++EE+ +++ DPI+QVR R+L +ASE DLK I+ VR Sbjct: 261 MQTYRYRGHSMSDPAKYRSKEEVQKIKEEQDPIDQVRNRILQQGFASEDDLKSIDKEVRA 320 Query: 339 IINNSVEFAQSDKEPDPAELYSDILI 364 I+ ++V+FAQSD+EPD +ELY+DIL+ Sbjct: 321 IVADAVDFAQSDQEPDASELYTDILV 346 >gi|163868058|ref|YP_001609262.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella tribocorum CIP 105476] gi|161017709|emb|CAK01267.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella tribocorum CIP 105476] Length = 346 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 213/341 (62%), Positives = 273/341 (80%) Query: 24 KRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCH 83 K+ + S + ++ F KE+E+ AYR MLLIRRFEEKAGQLYGMG++GGFCH Sbjct: 6 KKNSASVTHTALSSTTKKAPIAVFTKEEEIDAYREMLLIRRFEEKAGQLYGMGLIGGFCH 65 Query: 84 LCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGS 143 L IGQEAV++G + EGDQ+IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGGS Sbjct: 66 LYIGQEAVVIGTLKATKEGDQVITSYRDHGHMLAVGMSPRGVMAELTGRQGGFSKGKGGS 125 Query: 144 MHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNI 203 MHMFS + FYGGHGIVGAQV +G+G+AF+N+Y D + +V FGDGAANQGQVYESFN+ Sbjct: 126 MHMFSKEKNFYGGHGIVGAQVPIGSGLAFSNQYLGKDNVTLVYFGDGAANQGQVYESFNM 185 Query: 204 AALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 A+LW L V+Y+IENNQYAMGTSVSRASA+T+FS+RG+SF IPG+ VDGMD+R+VK D+ Sbjct: 186 ASLWKLPVVYIIENNQYAMGTSVSRASAETDFSRRGLSFEIPGIVVDGMDVRSVKGAADE 245 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 A+++ R+ KGPII++M TYRYRGHSMSDPA YR++EE+ +++ HDPI+QVR R+L W Sbjct: 246 AISWARSGKGPIILDMQTYRYRGHSMSDPAKYRSKEEVQKIKEEHDPIDQVRSRILKQNW 305 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 ASE D K IE VR I+ ++ +FAQSD+EPD +ELY+DIL+ Sbjct: 306 ASEDDFKSIEKEVRAIVADAADFAQSDQEPDASELYTDILV 346 >gi|85716522|ref|ZP_01047493.1| dehydrogenase, E1 component [Nitrobacter sp. Nb-311A] gi|85696711|gb|EAQ34598.1| dehydrogenase, E1 component [Nitrobacter sp. Nb-311A] Length = 340 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 223/324 (68%), Positives = 271/324 (83%), Gaps = 1/324 (0%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + F +EQEL A R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEA++VGM+M+L Sbjct: 17 KSQPPPSFTREQELHALREMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAIVVGMQMAL 76 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGDQ+IT YR+HGH+LACG+DA +MAELTGR+GG S+GKGGSMHMFS + FYGGHGI Sbjct: 77 EEGDQVITGYRDHGHMLACGMDAKGVMAELTGRRGGYSRGKGGSMHMFSKEKHFYGGHGI 136 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQVSLGTG+AFAN+YR +D++ + FGDGAANQGQVYESFN+A LW L V+Y+IENN+ Sbjct: 137 VGAQVSLGTGLAFANRYRGNDRVSLTYFGDGAANQGQVYESFNMAELWKLPVVYIIENNR 196 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTSV+R+SAQT+FSKRG+SF+IPG Q+DGMD+RAVKA DKAV +CR GP I+EM Sbjct: 197 YAMGTSVARSSAQTDFSKRGMSFDIPGEQIDGMDVRAVKAAGDKAVKWCREGNGPYILEM 256 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE++++R + DPIEQVR RLL K SE DLK+I+ R+I Sbjct: 257 QTYRYRGHSMSDPAKYRTREEVDKVRHDQDPIEQVRNRLLAAKV-SEDDLKKIDAEAREI 315 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N + +FAQ+D EPD +ELY+DI Sbjct: 316 VNTAADFAQNDPEPDASELYTDIY 339 >gi|83943192|ref|ZP_00955652.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Sulfitobacter sp. EE-36] gi|83846200|gb|EAP84077.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Sulfitobacter sp. EE-36] Length = 336 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 195/324 (60%), Positives = 247/324 (76%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + + E+ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KPTKKTNASAEELKAYYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEATA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +GD IT YR+HGH+LACG++ +MAELTGR+GG S+GKGGSMHMFS + FYGGHGI Sbjct: 65 KDGDSRITTYRDHGHMLACGMNPDGVMAELTGREGGYSRGKGGSMHMFSKEKKFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGA V LG GIAFA+KY+ +D + FGDGAANQGQVYE+FN+AALW L VI++IENNQ Sbjct: 125 VGANVPLGAGIAFADKYKGNDNVTFTYFGDGAANQGQVYETFNMAALWKLPVIFIIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTS R+++ +RG +F IPG VDGMD+ AVK ++AV +CR+ GP I+E+ Sbjct: 185 YAMGTSQQRSTSSAEIWERGKAFGIPGEAVDGMDVLAVKDAGERAVKHCRSGDGPYILEI 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR DPIEQVR LL +K ASE DLK I+ +++I Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMRDERDPIEQVRNILLEHKHASEDDLKAIDKEIKEI 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N S EFA+ EP EL++DI Sbjct: 305 VNASAEFAKESPEPAAEELWTDIY 328 >gi|85374108|ref|YP_458170.1| pyruvate dehydrogenase E1 component alpha subunit [Erythrobacter litoralis HTCC2594] gi|84787191|gb|ABC63373.1| pyruvate dehydrogenase E1 component alpha subunit [Erythrobacter litoralis HTCC2594] Length = 365 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 197/358 (55%), Positives = 260/358 (72%), Gaps = 5/358 (1%) Query: 11 GDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSE---FNKEQELSAYRLMLLIRRFEE 67 A S A + D V E FE ++ + ++ L Y MLLIRRFEE Sbjct: 6 TRKTPAKKKSSVKPNPAATDEDFVLHSLQEEFEKNKRYKASDKEMLDFYEQMLLIRRFEE 65 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGHILACGVDASKIM 126 +AGQLYG+G++GGFCHL IGQEAV +G++ +L + D +IT YR+HGH+LA G+D IM Sbjct: 66 RAGQLYGLGLIGGFCHLYIGQEAVAIGLQSALDGDKDSVITGYRDHGHMLAYGIDPKVIM 125 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 AELTGR+ GISKGKGGSMHMFST++ FYGGHGIVGAQV+LG G+AFA+KY IC+ Sbjct: 126 AELTGREAGISKGKGGSMHMFSTEHKFYGGHGIVGAQVALGGGLAFAHKYNEDGGICLAY 185 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPG 246 FGDGAANQGQVYE+FN+AALWNL +++V+E+NQYAMGTS R+SA+T F +RG SF IPG Sbjct: 186 FGDGAANQGQVYETFNMAALWNLPIVFVVEDNQYAMGTSTKRSSAETRFYRRGTSFRIPG 245 Query: 247 MQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRS 306 M+V+GMD+ V+A + A + R GP+++E TYRYRGHSMSDPA YRTREE+ + R Sbjct: 246 MEVNGMDVLEVRAAAEIAFKHVREGNGPVLMECNTYRYRGHSMSDPAKYRTREEVQDQRD 305 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 +HDPIE ++K L+ SE DLK I+ +R ++ + +FA++ EPDP+ELY+D+L+ Sbjct: 306 HHDPIEGLKKALIEQGK-SEDDLKAIDKAIRAQVSEAADFAENSPEPDPSELYTDVLV 362 >gi|294011435|ref|YP_003544895.1| pyruvate dehydrogenase E1 component alpha subunit [Sphingobium japonicum UT26S] gi|292674765|dbj|BAI96283.1| pyruvate dehydrogenase E1 component alpha subunit [Sphingobium japonicum UT26S] Length = 358 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 192/332 (57%), Positives = 256/332 (77%), Gaps = 2/332 (0%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 + P + + + +KE+ L YR M+LIRRFEEKAGQLYG+G++GGFCHL IGQEAV V Sbjct: 25 HNRPRPDTPKDYDASKEELLEFYRQMVLIRRFEEKAGQLYGLGLIGGFCHLYIGQEAVAV 84 Query: 94 GMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG 152 G++ +L G D +IT YR+HGH+LA G+D + IMAELTGR+ GIS+GKGGSMHMFS ++ Sbjct: 85 GIQSALQPGKDSVITGYRDHGHMLAYGIDPNVIMAELTGREAGISRGKGGSMHMFSVEHK 144 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 FYGGHGIVGAQVSLG G+ FA+KY +CV FGDGAANQGQVYESFN+A LW L +I Sbjct: 145 FYGGHGIVGAQVSLGAGLGFAHKYNNDGGVCVAYFGDGAANQGQVYESFNMAELWKLPII 204 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 +VIENNQYAMGTSV+R+SA+ +RG SF IPG+QV+GMD+ AV+ ++A+ + +A Sbjct: 205 FVIENNQYAMGTSVNRSSAEDQLYRRGESFRIPGIQVNGMDVLAVRGATEEALKWVQAGN 264 Query: 273 GPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 GPI++EM TYRYRGHSMSDPA YR+REE+ MR DPIE V+K L E +LK+I Sbjct: 265 GPILLEMKTYRYRGHSMSDPAKYRSREEVQSMREKSDPIEGVKKYLAEMGV-GEDELKKI 323 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 + ++RK+++++ +FA++ EP+ +LY+D+L+ Sbjct: 324 DQDIRKVVSDAADFAETSPEPELHDLYTDVLV 355 >gi|91977282|ref|YP_569941.1| pyruvate dehydrogenase (lipoamide) [Rhodopseudomonas palustris BisB5] gi|91683738|gb|ABE40040.1| Pyruvate dehydrogenase (lipoamide) [Rhodopseudomonas palustris BisB5] Length = 344 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 234/343 (68%), Positives = 283/343 (82%), Gaps = 1/343 (0%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 + K++A +V +F KEQEL A+R MLLIRRFEEKAGQLYGMG +GG Sbjct: 2 AAPKKSAAKETGQDRNSGPTKSKVPDFTKEQELHAFRDMLLIRRFEEKAGQLYGMGAIGG 61 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LAC +DA +MAELTGR+GG SKGK Sbjct: 62 FCHLYIGQEAVVVGMQMALREGDQVITGYRDHGHMLACEMDAKGVMAELTGRRGGYSKGK 121 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMFS + FYGGHGIVGAQVSLGTGIAFAN+YR + +C+ FGDGA+NQGQVYES Sbjct: 122 GGSMHMFSMEKHFYGGHGIVGAQVSLGTGIAFANRYRDNGSVCLAYFGDGASNQGQVYES 181 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A LW L V+YVIENN+YAMGTSV+R+SAQT+FSKRGVSFNIPG QVDGMD+RAVKA Sbjct: 182 FNMAELWKLPVVYVIENNRYAMGTSVTRSSAQTDFSKRGVSFNIPGEQVDGMDVRAVKAA 241 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 DKAVA+CRA GP I+EM TYRYRGHSMSDPA YRTREE++++R++ DPIEQVR+RLL Sbjct: 242 GDKAVAHCRAGNGPYILEMQTYRYRGHSMSDPAKYRTREEVDKIRNDQDPIEQVRQRLLG 301 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + +E DLK+I+ VRKI+N + +FAQ+D EPDP+ELY+D+ Sbjct: 302 SD-MTEDDLKKIDAEVRKIVNEAADFAQNDPEPDPSELYTDVY 343 >gi|316933973|ref|YP_004108955.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Rhodopseudomonas palustris DX-1] gi|315601687|gb|ADU44222.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhodopseudomonas palustris DX-1] Length = 344 Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 235/343 (68%), Positives = 281/343 (81%), Gaps = 1/343 (0%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 + K++A V F+KEQEL A+R MLLIRRFEEKAGQLYGMG +GG Sbjct: 2 AAPKKSAAKETAQDKAGGASPSNVPPFSKEQELGAFREMLLIRRFEEKAGQLYGMGAIGG 61 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LACG+DA+ +MAELTGR+GG SKGK Sbjct: 62 FCHLYIGQEAVVVGMQMALREGDQVITGYRDHGHMLACGMDANGVMAELTGRRGGYSKGK 121 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMFS + F+GGHGIVGAQVSLGTGIAFAN+YR ++C+ FGDGAANQGQVYES Sbjct: 122 GGSMHMFSREKSFFGGHGIVGAQVSLGTGIAFANRYRGDGRVCLAYFGDGAANQGQVYES 181 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A LW L V+YVIENN+YAMGTSV+R+SAQT+FSKRGVSFNIPG QVDGMD+RAVKA Sbjct: 182 FNMAELWKLPVVYVIENNRYAMGTSVTRSSAQTDFSKRGVSFNIPGEQVDGMDVRAVKAA 241 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 DKAVA+CRA GP I+EM TYRYRGHSMSDPA YR+REE++++R++ DPIEQVRKRLL Sbjct: 242 GDKAVAHCRAGNGPFILEMQTYRYRGHSMSDPAKYRSREEVDKIRNDQDPIEQVRKRLLA 301 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +E DLK I+ VRK++N S +FAQ D EPDP+ELY+D+ Sbjct: 302 LD-MTEEDLKAIDAEVRKVVNESADFAQHDPEPDPSELYTDVY 343 >gi|254469209|ref|ZP_05082614.1| pyruvate dehydrogenase E1 component, alpha subunit [Pseudovibrio sp. JE062] gi|211961044|gb|EEA96239.1| pyruvate dehydrogenase E1 component, alpha subunit [Pseudovibrio sp. JE062] Length = 349 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 220/317 (69%), Positives = 270/317 (85%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 EF+KE+EL+AYR ML IRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+M+ +GDQM Sbjct: 31 EFSKEEELNAYREMLFIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMEMAKEKGDQM 90 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YR+H H+LACG+D + +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQV+ Sbjct: 91 ITSYRDHAHMLACGMDPNGVMAELTGRRGGLSKGKGGSMHMFSKEQEFYGGHGIVGAQVA 150 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTG+AFAN+Y+ + K+ + FGDGAANQGQVYESFN+A LWNL VIYVIENN+Y MGTS Sbjct: 151 LGTGLAFANRYKENGKVSMAFFGDGAANQGQVYESFNMAKLWNLPVIYVIENNKYGMGTS 210 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + RAS+ T+ S+RG SF IPG+QVDGMD+RAVKA D A+ +CR GP I+EM+TYRYR Sbjct: 211 IERASSTTDLSQRGASFGIPGVQVDGMDVRAVKAATDYAMEWCREGNGPYILEMITYRYR 270 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YR+++E+ +MRS HDPIEQVR RLL +WASE +LK I+ VR ++ S E Sbjct: 271 GHSMSDPAKYRSKDEVQKMRSEHDPIEQVRARLLEKEWASEDELKAIDKEVRGVVAASAE 330 Query: 346 FAQSDKEPDPAELYSDI 362 FAQ+D EPDP+ELY+DI Sbjct: 331 FAQNDPEPDPSELYTDI 347 >gi|149201839|ref|ZP_01878813.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseovarius sp. TM1035] gi|149144887|gb|EDM32916.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseovarius sp. TM1035] Length = 336 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 196/323 (60%), Positives = 244/323 (75%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + S + E YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KSTKKSNVSAEDLKQYYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ IT YR+HGH+LACG+D + +MAELTGR+GG S+GKGGSMHMFST+ FYGGHGI Sbjct: 65 EEGDRRITTYRDHGHMLACGMDPNGVMAELTGREGGYSRGKGGSMHMFSTEKRFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGA V LG G+AFA+KY +D++ FGDGAANQGQVYE+FN+AALW L VI+VIENNQ Sbjct: 125 VGANVPLGAGLAFADKYLGNDRVTFTYFGDGAANQGQVYETFNMAALWQLPVIFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTS R+++ + RG +F IPG VDGMD+ AVK DKAVA+CR+ GP I+E+ Sbjct: 185 YAMGTSQKRSTSSPDIYTRGQAFGIPGEAVDGMDVLAVKEAGDKAVAHCRSGAGPYILEI 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR D IE VR L+ A+E DLK I+ ++ + Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMREEKDAIEHVRDLLVSGGHATEEDLKAIDKEIKDV 304 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 +N S EFA+ EP EL++DI Sbjct: 305 VNASAEFAKESPEPALDELWTDI 327 >gi|254502505|ref|ZP_05114656.1| pyruvate dehydrogenase E1 component, alpha subunit [Labrenzia alexandrii DFL-11] gi|222438576|gb|EEE45255.1| pyruvate dehydrogenase E1 component, alpha subunit [Labrenzia alexandrii DFL-11] Length = 345 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 221/344 (64%), Positives = 275/344 (79%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 +AK+ + + ++EF KE+E AYR MLLIRRFEEKAGQLYGMG++GG Sbjct: 2 AAAKKTSAGTSRTRSSAKKAEPAIAEFTKEEEFHAYREMLLIRRFEEKAGQLYGMGLIGG 61 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL IGQEAV+VGM+M+ +GDQMITAYR+HGH+LA +D +MAELTGR+GG+SKGK Sbjct: 62 FCHLYIGQEAVVVGMQMAKIDGDQMITAYRDHGHMLAMDLDPKGVMAELTGRRGGLSKGK 121 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHMFS + FYGGHGIVGAQVSLGTG+ FANKYR + +C+ FGDGA+NQGQVYES Sbjct: 122 GGSMHMFSKEKHFYGGHGIVGAQVSLGTGLGFANKYRENGNVCMTFFGDGASNQGQVYES 181 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+A LW L VIYVIENN+Y MGTSV R+S+ T+ S+RG SFNIPG +VDGMD+RAV A Sbjct: 182 FNMAELWKLPVIYVIENNKYGMGTSVERSSSMTDLSQRGASFNIPGEKVDGMDVRAVMAA 241 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLH 320 KA+ +CR KGP I+EM+TYRYRGHSMSDPA YR+++E+ +MR+ HDPIEQVRKRLL Sbjct: 242 SKKALEWCRDGKGPYILEMVTYRYRGHSMSDPAKYRSKDEVQKMRTEHDPIEQVRKRLLD 301 Query: 321 NKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 NKWA+E DLK ++ ++R + + EFAQ+D EPD +ELY+DIL+ Sbjct: 302 NKWATEDDLKGLDKDIRARVAEAAEFAQTDPEPDASELYTDILL 345 >gi|192291582|ref|YP_001992187.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhodopseudomonas palustris TIE-1] gi|192285331|gb|ACF01712.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhodopseudomonas palustris TIE-1] Length = 344 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 237/347 (68%), Positives = 281/347 (80%), Gaps = 7/347 (2%) Query: 18 NPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 P SA + T P V F KEQEL A+R MLLIRRFEEKAGQLYGMG Sbjct: 3 APKKSAAKETTQDKAGGASP----SNVPPFTKEQELGAFREMLLIRRFEEKAGQLYGMGA 58 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 +GGFCHL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LACG+DA+ +MAELTGR+GG S Sbjct: 59 IGGFCHLYIGQEAVVVGMQMALREGDQVITGYRDHGHMLACGMDANGVMAELTGRRGGYS 118 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHMFS + F+GGHGIVGAQVSLGTGIAFAN+YR ++C+ FGDGAANQGQV Sbjct: 119 KGKGGSMHMFSREKSFFGGHGIVGAQVSLGTGIAFANRYRGDGRVCLAYFGDGAANQGQV 178 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 YESFN+A LW L V+YVIENN+YAMGTSV+R+SAQT+FSKRGVSFNIPG QVDGMD+RAV Sbjct: 179 YESFNMAELWKLPVVYVIENNRYAMGTSVTRSSAQTDFSKRGVSFNIPGEQVDGMDVRAV 238 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 KA DKAVA+CRA GP I+EM TYRYRGHSMSDPA YR+REE++++R++ DPIEQVRKR Sbjct: 239 KAAGDKAVAHCRAGNGPFILEMQTYRYRGHSMSDPAKYRSREEVDKIRNDQDPIEQVRKR 298 Query: 318 LLHNKW-ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 LL +E DLK I+ VRK++N S +FAQ D EPDP+E+Y+D+ Sbjct: 299 LL--GLDMTEDDLKAIDAEVRKVVNESADFAQHDPEPDPSEVYTDVY 343 >gi|73667399|ref|YP_303415.1| pyruvate dehydrogenase (lipoamide) [Ehrlichia canis str. Jake] gi|72394540|gb|AAZ68817.1| Pyruvate dehydrogenase (lipoamide) [Ehrlichia canis str. Jake] Length = 327 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 179/318 (56%), Positives = 236/318 (74%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 EQ ++ Y MLL+RRFEEK+GQLYGMG++GGFCHL IGQEA+ G++ ++TEGD + Sbjct: 8 NLTNEQLVNCYYSMLLMRRFEEKSGQLYGMGLIGGFCHLYIGQEAIAAGIQNAITEGDAI 67 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YR+HG +L+ G D +MAEL G+ G SKGKGGSMHMF+ + F+GGHGIV AQV Sbjct: 68 ITSYRDHGFMLSVGTDPKYVMAELMGKSTGCSKGKGGSMHMFNIEKNFFGGHGIVAAQVP 127 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +GTGIA ANKY++++ I CFGDGA NQGQVYE+FNIAALW L VIYVIENN+YAMGTS Sbjct: 128 IGTGIALANKYKKNNNIVFTCFGDGAVNQGQVYEAFNIAALWKLPVIYVIENNEYAMGTS 187 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 VSR+S T+ K+G SF IPG QVDGM++ AV A YCR++ GPI++EM TYRYR Sbjct: 188 VSRSSYITDLYKKGESFGIPGHQVDGMNLFAVTQAAIDAATYCRSNNGPILLEMKTYRYR 247 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YR+++E+ ++ N DPI ++ L+ N S+ + + + +R I+ +V+ Sbjct: 248 GHSMSDPAKYRSKQEVEGIKENKDPITHLKNHLISNNIVSDEECNKYDKEIRNIVKEAVD 307 Query: 346 FAQSDKEPDPAELYSDIL 363 F+Q+ EPD LY+DI Sbjct: 308 FSQNSSEPDINTLYTDIY 325 >gi|149184585|ref|ZP_01862903.1| pyruvate dehydrogenase E1 component alpha subunit [Erythrobacter sp. SD-21] gi|148831905|gb|EDL50338.1| pyruvate dehydrogenase E1 component alpha subunit [Erythrobacter sp. SD-21] Length = 356 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 195/354 (55%), Positives = 262/354 (74%), Gaps = 5/354 (1%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVS---EFNKEQELSAYRLMLLIRRFEEKAGQ 71 MA P+ +A + + D E E + +Q Y MLLIRRFEE+AGQ Sbjct: 1 MAKAPTKTAPHSPAENPDFALHSLQEELEAKKRYDATDDQLRDFYEQMLLIRRFEERAGQ 60 Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELT 130 LYG+G++GGFCHL IGQEAV VG++ +LTE D +IT YR+HGH+LA G+D IMAELT Sbjct: 61 LYGLGLIGGFCHLYIGQEAVAVGLQSALTEQLDSVITGYRDHGHMLAYGIDPKVIMAELT 120 Query: 131 GRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDG 190 GR+ GISKGKGGSMHMFST++ FYGGHGIVGAQV+LG G+A A++Y +C+ FGDG Sbjct: 121 GREAGISKGKGGSMHMFSTEHKFYGGHGIVGAQVALGGGLALAHQYNEDGGLCLAYFGDG 180 Query: 191 AANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVD 250 AANQGQVYE+FN+A+LW L +++VIENNQYAMGT+VSR+SA+T F +RG +F IPGM+V+ Sbjct: 181 AANQGQVYETFNMASLWKLPIVFVIENNQYAMGTAVSRSSAETEFYRRGTAFRIPGMKVN 240 Query: 251 GMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDP 310 GMD+ V+ + A + R +GP+++E TYRYRGHSMSDPA YRTREE+ +++ + DP Sbjct: 241 GMDVLEVRQAAEIAFKHVREGRGPVLMECETYRYRGHSMSDPAKYRTREEVQDVKEHKDP 300 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 IE V+K L+ SE DLK I+ +RK+++ + +FA++ EPDP+ELY+D+L+ Sbjct: 301 IEAVKKILIEQG-NSEDDLKAIDKGIRKVVSEAADFAENSPEPDPSELYTDVLV 353 >gi|68171461|ref|ZP_00544848.1| Pyruvate dehydrogenase (lipoamide) [Ehrlichia chaffeensis str. Sapulpa] gi|88657641|ref|YP_507043.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Ehrlichia chaffeensis str. Arkansas] gi|67999122|gb|EAM85785.1| Pyruvate dehydrogenase (lipoamide) [Ehrlichia chaffeensis str. Sapulpa] gi|88599098|gb|ABD44567.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Ehrlichia chaffeensis str. Arkansas] Length = 327 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 179/318 (56%), Positives = 238/318 (74%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 EQ ++ Y MLL+RRFEEK+GQLYGMG++GGFCHL IGQEA+ G++ ++ +GD + Sbjct: 8 NLTNEQLVNCYYSMLLMRRFEEKSGQLYGMGLIGGFCHLYIGQEAIATGIQNAIIDGDSI 67 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YR+HG +L+ G D +MAEL G+ G SKGKGGSMHMF+ + F+GGHGIVGAQV Sbjct: 68 ITSYRDHGFMLSVGTDPKYVMAELMGKSTGCSKGKGGSMHMFNIEKHFFGGHGIVGAQVP 127 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +GTGIA ANKY++++ + VC GDGA NQGQVYESFN+AALW L VIYVIENN+YAMGTS Sbjct: 128 IGTGIALANKYKKNNNVVFVCLGDGAVNQGQVYESFNMAALWKLPVIYVIENNEYAMGTS 187 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 VSR+S T+ K+G SF +PG QVDGMD+ +V AV YCRA+ GPI++EM TYRYR Sbjct: 188 VSRSSYITDLYKKGESFGVPGHQVDGMDLFSVTQAATDAVNYCRANNGPILLEMKTYRYR 247 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YR+++E+ E++ + DPI ++ L+ N S+ + + + +R I+ SV+ Sbjct: 248 GHSMSDPAKYRSKQEVEEIKEHKDPITNLKNYLISNNIISDDECNKYDKEIRNIVKESVD 307 Query: 346 FAQSDKEPDPAELYSDIL 363 F+Q+ EPD LY+DI Sbjct: 308 FSQNSSEPDAKMLYTDIY 325 >gi|146341016|ref|YP_001206064.1| pyruvate dehydrogenase E1 component subunit alpha [Bradyrhizobium sp. ORS278] gi|146193822|emb|CAL77839.1| Pyruvate dehydrogenase E1 component, alpha subunit [Bradyrhizobium sp. ORS278] Length = 340 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 233/319 (73%), Positives = 272/319 (85%), Gaps = 1/319 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 EF KEQEL+A R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+L +GDQ Sbjct: 22 PEFTKEQELAALRDMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAVVVGMQMALKQGDQ 81 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT YR+HGH+LA G+DA +MAELTGR+GG SKGKGGSMHMFS + F+GGHGIVGAQV Sbjct: 82 VITGYRDHGHMLATGMDAKGVMAELTGRRGGYSKGKGGSMHMFSMEKNFFGGHGIVGAQV 141 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 SLGTG+A AN+YR +D + V FGDGAANQGQVYESFN+A LW L VIYVIENN+YAMGT Sbjct: 142 SLGTGLALANRYRGNDSVSVAYFGDGAANQGQVYESFNMAELWKLPVIYVIENNRYAMGT 201 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +VSRASAQT+FSKRG+SFNIPG QVDGMD+RAVKA +KAVA+CR KGP I+EM TYRY Sbjct: 202 AVSRASAQTDFSKRGLSFNIPGEQVDGMDVRAVKAAGEKAVAWCREGKGPFILEMQTYRY 261 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE+ ++R + DPIEQVR RLL K SE DLK I+ +VRKI+N + Sbjct: 262 RGHSMSDPAKYRTREEVEKVRHDQDPIEQVRNRLLAAKV-SEQDLKAIDADVRKIVNEAA 320 Query: 345 EFAQSDKEPDPAELYSDIL 363 +FAQ+D EPDPAELY+D+ Sbjct: 321 DFAQADPEPDPAELYTDVY 339 >gi|319407099|emb|CBI80736.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella sp. 1-1C] Length = 346 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 214/342 (62%), Positives = 276/342 (80%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 AK+++ S++ + +++ F KE+E+ AYR MLLIRRFEEKAGQLYGMG++GGFC Sbjct: 5 AKKSSMSTMYAGSPDTTKTAQIANFTKEEEIDAYREMLLIRRFEEKAGQLYGMGLIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAVI G + GDQ+IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGG Sbjct: 65 HLYIGQEAVITGTLKATKVGDQIITSYRDHGHMLAAGMSPRGVMAELTGRQGGFSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQV +G+G+AF+N+Y D + +V FGDGAANQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVPIGSGLAFSNQYLGKDNVTLVYFGDGAANQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +AALW L V+Y+IENNQYAMGTSVSRASA+TNFS+RG+SF+IPG+ VDGMD+RAVK D Sbjct: 185 MAALWKLPVVYIIENNQYAMGTSVSRASAETNFSRRGLSFDIPGIAVDGMDVRAVKKAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 +A+ + R+ KGP+I++M TYRYRGHSMSDPA YR++EE+ +++S HDPI QV+ RL+ Sbjct: 245 EAIVWARSGKGPMILDMQTYRYRGHSMSDPAKYRSKEEVEKVKSEHDPISQVKSRLIKQG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 WASE DLK I+ VR I+ ++ +FAQ+D EPD +ELY+DI++ Sbjct: 305 WASEDDLKFIDNEVRAIVADAADFAQNDLEPDSSELYTDIIV 346 >gi|294677242|ref|YP_003577857.1| pyruvate dehydrogenase complex E1 component pyruvate dehydrogenase (acetyl-transferring) subunit alpha [Rhodobacter capsulatus SB 1003] gi|294476062|gb|ADE85450.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (acetyl-transferring), alpha subunit [Rhodobacter capsulatus SB 1003] Length = 334 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 194/327 (59%), Positives = 248/327 (75%) Query: 37 PFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 P +KE+ L+ YR ML+IRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ Sbjct: 7 PETAAQARPNVSKEELLTYYRDMLMIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLE 66 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 + GD+ IT+YR+HGH+LACG+D +MAELTGR+GG+SKGKGGSMHMFS + FYGG Sbjct: 67 AATKPGDKRITSYRDHGHMLACGMDPKGVMAELTGREGGLSKGKGGSMHMFSKEKHFYGG 126 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 HGIVGAQV LG G+AFA+KY +D + FGDGAANQGQVYE+FN+AALW L VI+VIE Sbjct: 127 HGIVGAQVPLGAGLAFADKYLGNDNVTFAYFGDGAANQGQVYETFNMAALWKLPVIFVIE 186 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQYAMGT+ R+++ + RG +F IPG VDGMD+ AVKA +KAVA+CR+ GP I Sbjct: 187 NNQYAMGTAQKRSTSTPDIYMRGEAFGIPGEIVDGMDVLAVKAASEKAVAHCRSGAGPYI 246 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +E+ TYRYRGHSMSDPA YRTREE+ +MR D IE VR+ L+ + A++ DLK I+ + Sbjct: 247 LEVKTYRYRGHSMSDPAKYRTREEVQKMRDERDAIENVRELLISSGQATDEDLKAIDREI 306 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 + I+N + EF++ EP EL++DI Sbjct: 307 KAIVNEAAEFSKESPEPALTELWTDIY 333 >gi|118589907|ref|ZP_01547311.1| pyruvate dehydrogenase alpha2 subunit protein [Stappia aggregata IAM 12614] gi|118437404|gb|EAV44041.1| pyruvate dehydrogenase alpha2 subunit protein [Stappia aggregata IAM 12614] Length = 349 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 217/321 (67%), Positives = 268/321 (83%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++EF+K++EL AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+M+ +GD Sbjct: 29 IAEFDKDEELHAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQMAKKDGD 88 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 QMIT YR+HGH+LA +D +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQ Sbjct: 89 QMITGYRDHGHMLAMDLDPKGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQ 148 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTG+ FANKYR + + + FGDGA+NQGQVYESFN+A LW L V+YV+ENN+Y MG Sbjct: 149 VSLGTGLGFANKYRENGNVAMAFFGDGASNQGQVYESFNMAELWKLPVVYVVENNKYGMG 208 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV+RASA T+ S+RG SFNIPG QVDGMD+RAVKA ++A+ +CR KGP I+EM+TYR Sbjct: 209 TSVARASATTDLSQRGASFNIPGKQVDGMDVRAVKAASEEALEWCREGKGPFILEMITYR 268 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR+++E+ +MR+ HDPIEQVR RL+ WASE DLK I+ VR + + Sbjct: 269 YRGHSMSDPAKYRSKDEVQKMRTEHDPIEQVRARLMDKGWASEDDLKAIDKEVRARVAEA 328 Query: 344 VEFAQSDKEPDPAELYSDILI 364 EFAQ+D EPD +ELY+DIL+ Sbjct: 329 AEFAQTDPEPDASELYTDILL 349 >gi|85706336|ref|ZP_01037430.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseovarius sp. 217] gi|85669109|gb|EAQ23976.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseovarius sp. 217] Length = 336 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 193/323 (59%), Positives = 245/323 (75%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KSTKKPNVSADDLKQYYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +GD+ IT YR+HGH+LACG+D +MAELTGR+GG S+GKGGSMHMFST+ FYGGHGI Sbjct: 65 EDGDRRITTYRDHGHMLACGMDPKGVMAELTGREGGYSRGKGGSMHMFSTEKRFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGA V LG G+AFA+KY +D++ FGDGAANQGQVYE+FN+AALW+L VI+VIENNQ Sbjct: 125 VGANVPLGAGLAFADKYLGNDRVTFTYFGDGAANQGQVYETFNMAALWSLPVIFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTS R+++ + RG +F IPG VDGMD+ AVK DKAVA+CR+ GP I+E+ Sbjct: 185 YAMGTSQQRSTSSPDIYHRGEAFGIPGEMVDGMDVLAVKEAGDKAVAHCRSGAGPYILEI 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR D IE VR L+ A+E DLK I+ +++++ Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMRDEKDAIEHVRDLLISGGHATEEDLKAIDKDIKEV 304 Query: 340 INNSVEFAQSDKEPDPAELYSDI 362 +N S EFA+ EP EL++DI Sbjct: 305 VNASAEFAKESPEPAIEELWTDI 327 >gi|307942230|ref|ZP_07657581.1| pyruvate dehydrogenase E1 component, alpha subunit [Roseibium sp. TrichSKD4] gi|307774516|gb|EFO33726.1| pyruvate dehydrogenase E1 component, alpha subunit [Roseibium sp. TrichSKD4] Length = 348 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 218/319 (68%), Positives = 267/319 (83%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 EF+K+QEL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ +GDQM Sbjct: 30 EFDKDQELHAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAKVDGDQM 89 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT YR+HGH+LA +D +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQVS Sbjct: 90 ITGYRDHGHMLAMDLDPKGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVS 149 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTG+ FANKYR + +C+ FGDGA+NQGQVYESFN+A LW L V+YVIENN+Y MGTS Sbjct: 150 LGTGLGFANKYRENGNVCMAFFGDGASNQGQVYESFNMAELWKLPVVYVIENNKYGMGTS 209 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R+SA T+ S+RG SF IPG QVDGMD+RAV A +KA+ +CR+ KGP I+EM+TYRYR Sbjct: 210 VERSSATTDLSQRGASFGIPGEQVDGMDVRAVMAASEKALEWCRSGKGPYILEMITYRYR 269 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YR+++E+ +MR+ HDPIEQV+ R+L NKWA+E +LK I+ +VR I + E Sbjct: 270 GHSMSDPAKYRSKDEVQKMRNEHDPIEQVKARILENKWATEDELKAIDKDVRAICAEAAE 329 Query: 346 FAQSDKEPDPAELYSDILI 364 FAQ+D EPD +ELY+DIL+ Sbjct: 330 FAQNDPEPDVSELYTDILL 348 >gi|90423989|ref|YP_532359.1| pyruvate dehydrogenase (lipoamide) [Rhodopseudomonas palustris BisB18] gi|90106003|gb|ABD88040.1| Pyruvate dehydrogenase (lipoamide) [Rhodopseudomonas palustris BisB18] Length = 347 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 236/346 (68%), Positives = 284/346 (82%), Gaps = 4/346 (1%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVS---EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 ++K+ T++ D + G + EF+K+QEL A R MLLIRRFEEKAGQLYGMG Sbjct: 2 AASKKRDTAAGDEIQPRSGNGSQHPAVLEFSKDQELRALRDMLLIRRFEEKAGQLYGMGA 61 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 +GGFCHL IGQEA++VGM+M+L GDQ+IT YR+HGH+LACG+DA +MAELTGRQGG S Sbjct: 62 IGGFCHLYIGQEAIVVGMQMTLKLGDQVITGYRDHGHMLACGMDAKGVMAELTGRQGGYS 121 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR +D + + FGDGA+NQGQV Sbjct: 122 KGKGGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRGNDNVSLAYFGDGASNQGQV 181 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 YESFN+A LW L V+YVIENN+YAMGTSV R+SAQT+FSKRGVSFNIPG QVDGMD+RAV Sbjct: 182 YESFNMAQLWKLPVVYVIENNRYAMGTSVKRSSAQTDFSKRGVSFNIPGEQVDGMDVRAV 241 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 KA DKAVA+CRA GP I+EM TYRYRGHSMSDPA YRTREE++++RS+ DPIEQVR+R Sbjct: 242 KAAGDKAVAHCRAGNGPYILEMQTYRYRGHSMSDPAKYRTREEVDKVRSDQDPIEQVRQR 301 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 LL K SE +LK I+ VR+I+N + EFAQ D EP+PAELY+D+ Sbjct: 302 LLGLKV-SEQELKAIDAEVREIVNGAAEFAQHDPEPEPAELYTDVY 346 >gi|288958362|ref|YP_003448703.1| pyruvate dehydrogenase E1 component, alpha subunit [Azospirillum sp. B510] gi|288910670|dbj|BAI72159.1| pyruvate dehydrogenase E1 component, alpha subunit [Azospirillum sp. B510] Length = 339 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 204/345 (59%), Positives = 252/345 (73%), Gaps = 9/345 (2%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 + S +R + D V + E+ L YR MLLIRRFEEKAGQLYGMG++G Sbjct: 2 AASRRRPTKAQTDTA--------PVQAVSSEELLHYYREMLLIRRFEEKAGQLYGMGLIG 53 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL IGQEAV+VG++ +L EGD +IT+YR+HGH+LACG+DA +MAELTGR GG SKG Sbjct: 54 GFCHLYIGQEAVVVGVQAALKEGDDVITSYRDHGHMLACGMDAKGVMAELTGRIGGYSKG 113 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMFS + FYGGHGIVG QV LGTG+AF++KY + V GDGA NQGQVYE Sbjct: 114 KGGSMHMFSREKNFYGGHGIVGGQVPLGTGLAFSHKYLNDGGVSAVYCGDGAINQGQVYE 173 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 SFN+AALW L V++VIENN+YAMGTS RASA +RG ++ IPG QV+GMD+ VKA Sbjct: 174 SFNMAALWKLPVLFVIENNKYAMGTSQERASAGE-LHQRGAAYGIPGYQVNGMDVLDVKA 232 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 D+ V Y R GP+I+EM TYRYRGHSMSDPA YRT+EE+ +MRS DPI+Q++ +LL Sbjct: 233 AADQWVNYIREGNGPVILEMKTYRYRGHSMSDPAKYRTKEEVEKMRSESDPIDQLKSKLL 292 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 A E LKEI+ V+ I+ S EFAQ EPDP+EL++DIL+ Sbjct: 293 AGGHADEDKLKEIDREVKAIVTESAEFAQQSPEPDPSELWTDILV 337 >gi|148255820|ref|YP_001240405.1| pyruvate dehydrogenase E1 component subunit alpha [Bradyrhizobium sp. BTAi1] gi|146407993|gb|ABQ36499.1| Pyruvate dehydrogenase E1 component, alpha subunit [Bradyrhizobium sp. BTAi1] Length = 340 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 233/319 (73%), Positives = 272/319 (85%), Gaps = 1/319 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 EF +EQEL+A R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+L EGDQ Sbjct: 22 PEFTREQELAALRDMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAVVVGMQMALKEGDQ 81 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT YR+HGH+LACG+DA +MAELTGR+GG SKGKGGSMHMFS + F+GGHGIVGAQV Sbjct: 82 VITGYRDHGHMLACGMDAKGVMAELTGRRGGYSKGKGGSMHMFSMEKNFFGGHGIVGAQV 141 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 SLGTG+A AN+YR +D + V FGDGAANQGQVYESFN+A LW L VIYVIENN+YAMGT Sbjct: 142 SLGTGLALANRYRGNDSVSVAYFGDGAANQGQVYESFNMAELWKLPVIYVIENNRYAMGT 201 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +VSRASAQT+FSKRG+SFNIPG QVDGMD+RAVKA +KAVA+CR KGP I+EM TYRY Sbjct: 202 AVSRASAQTDFSKRGISFNIPGEQVDGMDVRAVKAAGEKAVAWCREGKGPYILEMQTYRY 261 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE+ ++R + DPIEQVR RLL K SE DLK I+ +VRKI+N + Sbjct: 262 RGHSMSDPAKYRTREEVEKVRHDQDPIEQVRNRLLAAKV-SEQDLKAIDADVRKIVNEAA 320 Query: 345 EFAQSDKEPDPAELYSDIL 363 +FAQ+D EPD AELY+D+ Sbjct: 321 DFAQADPEPDAAELYTDVY 339 >gi|83858352|ref|ZP_00951874.1| pyruvate dehydrogenase complex, E1 component, pyruvatedehydrogenase alpha subunit [Oceanicaulis alexandrii HTCC2633] gi|83853175|gb|EAP91027.1| pyruvate dehydrogenase complex, E1 component, pyruvatedehydrogenase alpha subunit [Oceanicaulis alexandrii HTCC2633] Length = 342 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 199/320 (62%), Positives = 257/320 (80%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + ++Q +S Y+ MLL+RRFEEKAGQLYGMG++ GFCHL IGQEAV+VG++ +L EGDQ Sbjct: 21 PDVTEDQLMSWYKDMLLMRRFEEKAGQLYGMGLIAGFCHLYIGQEAVVVGVQGALEEGDQ 80 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT YR+H H+LA G+D + +MAELTGR+GG SKGKGGSMHMFS F+GGHGIVGAQV Sbjct: 81 VITGYRDHAHMLATGMDPNGVMAELTGREGGYSKGKGGSMHMFSRDKQFFGGHGIVGAQV 140 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +GTG+AF+NKY+++ K+C FGDGAANQGQVYESFN+A LWNL V+Y+IENNQYAMGT Sbjct: 141 PIGTGLAFSNKYKKNGKVCAAYFGDGAANQGQVYESFNMAKLWNLPVVYIIENNQYAMGT 200 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV+RAS++T+ KRG SF IPG +VDGMD+ AV +AV + R+ +GP I+EM TYRY Sbjct: 201 SVARASSETHLHKRGASFGIPGEEVDGMDVTAVYDAAKRAVEHARSGEGPFILEMKTYRY 260 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTR+E+N++R + DPI+ RK +L W+ E LKE++ V+ I+N S Sbjct: 261 RGHSMSDPAKYRTRDEVNDIRDHKDPIDLARKIILEKGWSDEDALKEMDKEVKAIVNKSA 320 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FA+ EPDP+ELY+D+LI Sbjct: 321 DFAKDSPEPDPSELYTDVLI 340 >gi|162147723|ref|YP_001602184.1| pyruvate dehydrogenase E1 component subunit alpha [Gluconacetobacter diazotrophicus PAl 5] gi|161786300|emb|CAP55882.1| Pyruvate dehydrogenase E1 component subunit alpha [Gluconacetobacter diazotrophicus PAl 5] Length = 363 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 190/324 (58%), Positives = 250/324 (77%), Gaps = 1/324 (0%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G +KE A+ M+LIRRFEE+AGQLYGMG++GGFCHL IGQEAV+VG++M L Sbjct: 39 GRNSPSMSKEDLTRAFHDMVLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVVVGVQMELK 98 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 +GD++IT+YR+HG +LA G+D +MAELTGR+GG S+GKGGSMHMFS++ FYGGHGIV Sbjct: 99 QGDKIITSYRDHGQMLAAGMDPRGVMAELTGREGGYSRGKGGSMHMFSSEKHFYGGHGIV 158 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLG G+AFANKYR +D++ + FG+GA++QGQVYESFN+AAL L ++V+ENN Y Sbjct: 159 GAQVSLGIGLAFANKYRGTDEVSIAYFGEGASSQGQVYESFNLAALHKLPCVFVLENNHY 218 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 MGTSV R+SA + G + IPG QVDGMD+ AV+ +A+ +CR KGP ++EM Sbjct: 219 GMGTSVERSSASKELWRNGEPWGIPGRQVDGMDVEAVRDAAREAIEHCRQGKGPYLLEMT 278 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YR R E++EMR NHDPI++VRK LL E +LK IE V++++ Sbjct: 279 TYRYRGHSMSDPAKYRPRSEVDEMRKNHDPIDRVRKELLAMGV-GEAELKTIEDKVKEVV 337 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 ++ +FAQ+ EPDPAEL++D+L+ Sbjct: 338 VDAADFAQTSPEPDPAELWTDVLV 361 >gi|307292635|ref|ZP_07572481.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sphingobium chlorophenolicum L-1] gi|306880701|gb|EFN11917.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sphingobium chlorophenolicum L-1] Length = 351 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 195/348 (56%), Positives = 258/348 (74%), Gaps = 3/348 (0%) Query: 18 NPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 N + + R A D + E + E+ YR M+LIRRFEEKAGQLYG+G+ Sbjct: 3 NKTARSARKAPPPAD-HNRKRPEAPVAYDPTVEELREFYRQMVLIRRFEEKAGQLYGLGL 61 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGI 136 +GGFCHL IGQEAV VG++ +L G D +IT YR+HGH+LA G+D + IMAELTGR+ GI Sbjct: 62 IGGFCHLYIGQEAVAVGIQSALEPGKDSVITGYRDHGHMLAYGIDPNVIMAELTGREAGI 121 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 S+GKGGSMHMFS ++ FYGGHGIVGAQVSLG G+ FA+KY +CV FGDGAANQGQ Sbjct: 122 SRGKGGSMHMFSVEHKFYGGHGIVGAQVSLGAGLGFAHKYNNDGGVCVAYFGDGAANQGQ 181 Query: 197 VYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA 256 VYESFN+A LW L +I+VIENNQYAMGTSV+R+SA+ +RG SF IPG+QV+GMD+ A Sbjct: 182 VYESFNMAELWKLPIIFVIENNQYAMGTSVNRSSAEDQLYRRGESFRIPGIQVNGMDVLA 241 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRK 316 V+ ++A+ + +A GPI++EM TYRYRGHSMSDPA YR+REE+ MR DPIE V++ Sbjct: 242 VRGATEEALKWVKAGNGPILLEMKTYRYRGHSMSDPAKYRSREEVQSMRDKSDPIEGVKQ 301 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 L SE +LK+I+ ++RKI++++ +FA++ EP+ +LY+D+L+ Sbjct: 302 YLAQAGV-SEDELKKIDQDIRKIVSDAADFAETSPEPELRDLYTDVLV 348 >gi|294083775|ref|YP_003550532.1| pyruvate dehydrogenase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663347|gb|ADE38448.1| Pyruvate dehydrogenase (acetyl-transferring) [Candidatus Puniceispirillum marinum IMCC1322] Length = 356 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 191/357 (53%), Positives = 256/357 (71%), Gaps = 14/357 (3%) Query: 8 VTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEE 67 T + K P K T D + + +R MLLIRRFEE Sbjct: 2 ATKTESKRKKGPGRPPKSVGTGVNDMPAT-------------DDLVKMFRDMLLIRRFEE 48 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 KAGQ+YGMG +GGFCHL IGQEAV+VG++ + EGD ++T+YR+HGH+LACG++A +MA Sbjct: 49 KAGQMYGMGQIGGFCHLYIGQEAVVVGLQSASVEGDTVVTSYRDHGHMLACGMEADGVMA 108 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 ELTGR+GG S+GKGGSMHMFS + F+GGHGIVGAQV +G G+AF++KY+ +C+ Sbjct: 109 ELTGREGGYSRGKGGSMHMFSREKNFFGGHGIVGAQVPIGVGLAFSHKYKGQKNVCMTYL 168 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGA NQGQVYESFN+AALW+L +++IENNQY MGT+V+RA+A + RG+++ IPG Sbjct: 169 GDGAVNQGQVYESFNMAALWDLPCLFIIENNQYGMGTAVTRAAAGRALADRGMAYGIPGK 228 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSN 307 QVDGMD+ AV+A +A+ +CR+ KGP I+EM TYRYRGHSMSDPA YRTREE++ MR Sbjct: 229 QVDGMDVLAVRAAALEALDHCRSGKGPYILEMKTYRYRGHSMSDPAKYRTREEVDTMRKQ 288 Query: 308 HDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 HDPI+Q+R+ L + E +LK I+ V+ I+ ++ EFAQ+ EPD +EL++DIL+ Sbjct: 289 HDPIDQLREILQNQNVKDE-ELKAIDSEVKAIVTDATEFAQTSPEPDASELFTDILL 344 >gi|209542347|ref|YP_002274576.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Gluconacetobacter diazotrophicus PAl 5] gi|209530024|gb|ACI49961.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 336 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 190/324 (58%), Positives = 250/324 (77%), Gaps = 1/324 (0%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G +KE A+ M+LIRRFEE+AGQLYGMG++GGFCHL IGQEAV+VG++M L Sbjct: 12 GRNSPSMSKEDLTRAFHDMVLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVVVGVQMELK 71 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 +GD++IT+YR+HG +LA G+D +MAELTGR+GG S+GKGGSMHMFS++ FYGGHGIV Sbjct: 72 QGDKIITSYRDHGQMLAAGMDPRGVMAELTGREGGYSRGKGGSMHMFSSEKHFYGGHGIV 131 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLG G+AFANKYR +D++ + FG+GA++QGQVYESFN+AAL L ++V+ENN Y Sbjct: 132 GAQVSLGIGLAFANKYRGTDEVSIAYFGEGASSQGQVYESFNLAALHKLPCVFVLENNHY 191 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 MGTSV R+SA + G + IPG QVDGMD+ AV+ +A+ +CR KGP ++EM Sbjct: 192 GMGTSVERSSASKELWRNGEPWGIPGRQVDGMDVEAVRDAAREAIEHCRQGKGPYLLEMT 251 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YR R E++EMR NHDPI++VRK LL E +LK IE V++++ Sbjct: 252 TYRYRGHSMSDPAKYRPRSEVDEMRKNHDPIDRVRKELLAMGV-GEAELKTIEDKVKEVV 310 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 ++ +FAQ+ EPDPAEL++D+L+ Sbjct: 311 VDAADFAQTSPEPDPAELWTDVLV 334 >gi|217976706|ref|YP_002360853.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylocella silvestris BL2] gi|217502082|gb|ACK49491.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylocella silvestris BL2] Length = 344 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 214/324 (66%), Positives = 258/324 (79%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 F KEQE AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG+ M+ Sbjct: 20 PPPAPPVFTKEQEFKAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGVMMAA 79 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 GDQ IT+YR+HGH++ACG+D +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGI Sbjct: 80 KPGDQTITSYRDHGHMIACGMDPKGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGI 139 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV LGTG+AFAN+YR + + FGDGAANQGQVYESFN+A LW L VI+++ENN+ Sbjct: 140 VGAQVPLGTGLAFANRYRSNGNVSYTYFGDGAANQGQVYESFNMAELWKLPVIFIVENNR 199 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTSV R+SA ++FSKRG SFNIPG QVDGMD+RAVKA +++A +C GPII+EM Sbjct: 200 YAMGTSVKRSSAMSDFSKRGQSFNIPGEQVDGMDVRAVKAAIERARDWCVGGNGPIILEM 259 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YR++EE+ +MR HDPIEQVR RLL + E +LK I+ VR I Sbjct: 260 QTYRYRGHSMSDPAKYRSKEEVQKMREEHDPIEQVRARLLRDHNVPEDELKAIDAEVRAI 319 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 + +V+FA D EPDPAEL++DIL Sbjct: 320 VAEAVDFASHDPEPDPAELWTDIL 343 >gi|254460798|ref|ZP_05074214.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacterales bacterium HTCC2083] gi|206677387|gb|EDZ41874.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacteraceae bacterium HTCC2083] Length = 333 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 195/319 (61%), Positives = 246/319 (77%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S + + L Y+ MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ Sbjct: 10 SNVSAKDLLQHYKDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDK 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 IT+YR+HGH+LACG+D + +MAELTGR G SKGKGGSMHMFS + FYGGHGIV AQV Sbjct: 70 RITSYRDHGHMLACGMDPNGVMAELTGRIDGYSKGKGGSMHMFSKEKHFYGGHGIVAAQV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AFA+KY+ + ++ FGDGAANQGQVYE+FN+AA+W+L I+VIENNQYAMGT Sbjct: 130 PLGAGLAFADKYQDNGRVTFTYFGDGAANQGQVYETFNMAAIWDLPCIFVIENNQYAMGT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S R+++ + RG +F IPG VDGMD+ AVK ++AV +CR+ KGP I+E+ TYRY Sbjct: 190 SQDRSTSTPDLHTRGEAFGIPGEIVDGMDVMAVKEAGERAVKHCRSGKGPYILEIKTYRY 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE+ +MR DPIEQVR LL K ASE DLK I+ ++K++N S Sbjct: 250 RGHSMSDPAKYRTREEVQKMRDERDPIEQVRDVLLTGKHASEDDLKAIDKEIKKVVNASA 309 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFA+ PD +EL++DI Sbjct: 310 EFAKDSPLPDVSELWTDIY 328 >gi|163793249|ref|ZP_02187225.1| 2-dehydro-3-deoxyphosphooctonate aldolase [alpha proteobacterium BAL199] gi|159181895|gb|EDP66407.1| 2-dehydro-3-deoxyphosphooctonate aldolase [alpha proteobacterium BAL199] Length = 351 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 195/320 (60%), Positives = 257/320 (80%), Gaps = 1/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 SE + EQ + YR ML+IRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+ ++ EGD Sbjct: 31 SEPSVEQLVDYYRDMLVIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQAAIGEGDT 90 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 ++T+YR+HGH+LA G++A +MAELTGR GG S+GKGGSMHMFS + F+GGHGIVGAQV Sbjct: 91 VVTSYRDHGHMLATGMEARGVMAELTGRIGGYSRGKGGSMHMFSREKNFFGGHGIVGAQV 150 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +GTG+AF ++YR SD++ + GDGA NQGQVYESFN+AALW L VI++IENN+Y MGT Sbjct: 151 PIGTGLAFNHRYRGSDRVSLTYMGDGAVNQGQVYESFNMAALWKLPVIFIIENNKYGMGT 210 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV+RA+A + ++RG ++ IPG ++DGM + AVKA DKAVAYCRA KGP I+EM TYRY Sbjct: 211 SVTRAAAGPSLAERGHAYGIPGEEIDGMSVTAVKAAGDKAVAYCRAGKGPYILEMKTYRY 270 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR++EE+N+MR HDPI+ +R+ L+ K E LK+++ V+ ++ ++ Sbjct: 271 RGHSMSDPAKYRSKEEVNKMRQEHDPIDSLRRVLIERKV-DEETLKKVDREVKDLVTDAA 329 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FAQ EPD AEL++DIL+ Sbjct: 330 DFAQQSPEPDVAELWTDILV 349 >gi|299134958|ref|ZP_07028149.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Afipia sp. 1NLS2] gi|298589935|gb|EFI50139.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Afipia sp. 1NLS2] Length = 339 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 226/346 (65%), Positives = 273/346 (78%), Gaps = 12/346 (3%) Query: 18 NPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 PS +A + ++S + EF KEQEL+A R MLLIRRFEEKAGQLYGMG Sbjct: 5 KPSAAATKGTSASAAKL-----------EFTKEQELTALRDMLLIRRFEEKAGQLYGMGA 53 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 +GGFCHL IGQEAV+ G++M L +GDQ+IT YR+HGH+LA G+D +MAELTGR+ G S Sbjct: 54 IGGFCHLYIGQEAVVTGIQMVLKQGDQIITGYRDHGHMLATGMDPKGVMAELTGRRHGYS 113 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHMFS + FYGGHGIVGAQV LGTG+AFAN+YR + I V FGDGAANQGQV Sbjct: 114 KGKGGSMHMFSKEKHFYGGHGIVGAQVPLGTGLAFANRYRNNGNISVAYFGDGAANQGQV 173 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 YESFN+A LW L +IYVIENN+YAMGTSV+R+SAQT+FSKRG++FNIPG QVDGMD+RAV Sbjct: 174 YESFNMAELWKLPIIYVIENNRYAMGTSVTRSSAQTDFSKRGIAFNIPGEQVDGMDVRAV 233 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 KA ++A A+CR KGP I+EM TYRYRGHSMSDPA YRTREE+ ++R + DPIEQVRKR Sbjct: 234 KAAAERAAAWCREGKGPYILEMQTYRYRGHSMSDPAKYRTREEVEKVRHDQDPIEQVRKR 293 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 LL K E +LK+I+ VR+I+N + +FAQ D EPD +ELY+DI Sbjct: 294 LLDAKV-DEAELKKIDAEVREIVNEAADFAQHDPEPDVSELYTDIY 338 >gi|296284153|ref|ZP_06862151.1| pyruvate dehydrogenase E1 component alpha subunit [Citromicrobium bathyomarinum JL354] Length = 362 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 194/360 (53%), Positives = 262/360 (72%), Gaps = 11/360 (3%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFL---------EGFEVSEFNKEQELSAYRLMLLIRRF 65 MA P+ A ++ VD P + ++ + ++EQ L Y MLLIRRF Sbjct: 1 MAKKPAAKKSPAKAENLAAVDDPDFVLHSLQEEFDKNKLYDASEEQMLHFYEQMLLIRRF 60 Query: 66 EEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGHILACGVDASK 124 EE+AGQLYG+G++GGFCHL IGQEAV +G++ +L + D +IT YR+HGH+LA G+D Sbjct: 61 EERAGQLYGLGLIGGFCHLYIGQEAVAIGLQSALDNDKDSVITGYRDHGHMLAYGIDPKV 120 Query: 125 IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 IM+ELTGRQ GISKGKGGSMHMFST++ FYGGHGIVGAQV LG G+AFA+KY IC+ Sbjct: 121 IMSELTGRQAGISKGKGGSMHMFSTEHKFYGGHGIVGAQVPLGAGLAFAHKYNEDGGICL 180 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 FGDGAANQGQVYE+FN+AALWNL + +V+E+NQYAMGT+ R+SA+T F +RG SF I Sbjct: 181 AYFGDGAANQGQVYEAFNMAALWNLPICFVVEDNQYAMGTATKRSSAETRFYRRGTSFRI 240 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEM 304 PGM+VDGM++ V+ + A + R GP+++E TYRYRGHSMSDPA YRTREE+ + Sbjct: 241 PGMEVDGMNVLEVRQAAEVAFKHIREGNGPVLMECNTYRYRGHSMSDPAKYRTREEVQDQ 300 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 + +HDPIE+++K L+ SE +LKEI+ +R ++ + +FA++ EP+ AELY+D+L+ Sbjct: 301 KEHHDPIERIKKTLIEKGK-SEDELKEIDKGIRSQVSEAADFAENSPEPEAAELYTDVLV 359 >gi|85708700|ref|ZP_01039766.1| pyruvate dehydrogenase E1 component alpha subunit [Erythrobacter sp. NAP1] gi|85690234|gb|EAQ30237.1| pyruvate dehydrogenase E1 component alpha subunit [Erythrobacter sp. NAP1] Length = 366 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 198/343 (57%), Positives = 260/343 (75%), Gaps = 5/343 (1%) Query: 26 AATSSVDCVDIPFLEGFEVSE---FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 A + D + E FE ++ + EQ L YR MLLIRRFEEKAGQLYG+G++GGFC Sbjct: 22 APSDDPDFILHSLQEEFEAAKSYAASDEQLLEFYRQMLLIRRFEEKAGQLYGLGLIGGFC 81 Query: 83 HLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKG 141 HL IGQEAV +G++ +L D +IT YR+HGH+LA G+D IMAELTGR+ GISKGKG Sbjct: 82 HLYIGQEAVAIGLQSALDNDRDSVITGYRDHGHMLAYGIDPKVIMAELTGREAGISKGKG 141 Query: 142 GSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF 201 GSMHMFST++ FYGGHGIVGAQV+LG G+A A++Y +C+ FGDGAANQGQVYE+F Sbjct: 142 GSMHMFSTEHKFYGGHGIVGAQVALGGGLALAHQYNEDGGLCLAYFGDGAANQGQVYETF 201 Query: 202 NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 N+AALWNL +++V+E+NQYAMGT+ SR+SA+T F +RG +F IPGM+V+GMD+ V+A Sbjct: 202 NMAALWNLPIVFVVEDNQYAMGTASSRSSAETRFHRRGTAFRIPGMEVNGMDVLEVRAAA 261 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHN 321 + A + R KGP+++E TYRYRGHSMSDPA YRTREE+ E R +HDPIE+++K L+ Sbjct: 262 EVAFKHVREGKGPVLMECNTYRYRGHSMSDPAKYRTREEVQEQRDHHDPIERLKKSLIEG 321 Query: 322 KWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 A E DLK I+ ++RKI+ + +FA+S EP P ELY+D+L+ Sbjct: 322 GHA-EEDLKAIDKDIRKIVTEAADFAESSPEPGPDELYTDVLV 363 >gi|222148556|ref|YP_002549513.1| pyruvate dehydrogenase alpha subunit [Agrobacterium vitis S4] gi|221735542|gb|ACM36505.1| pyruvate dehydrogenase alpha subunit [Agrobacterium vitis S4] Length = 348 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 239/347 (68%), Positives = 283/347 (81%), Gaps = 3/347 (0%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEV---SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 K A S P F V EF++E+EL AYR MLLIRRFEEKAGQLYGMG Sbjct: 2 APRKNATASGRKPAAKPVKGDFAVGTIEEFDREKELKAYREMLLIRRFEEKAGQLYGMGF 61 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 +GGFCHL IGQEAV+VGM+M+L GDQ+IT YR+HGH+LACG+ A +MAELTGR+GG+S Sbjct: 62 IGGFCHLYIGQEAVVVGMQMALKLGDQVITGYRDHGHMLACGMSARGVMAELTGRRGGLS 121 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHMFS + FYGGHGIVGAQVSLGTG+AFANKYR +D + + FGDGAANQGQV Sbjct: 122 KGKGGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANKYRGNDNVSLAYFGDGAANQGQV 181 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 YESFN+A LWNL VIYVIENN+YAMGTSV+RASAQT+FS+RGVSFNIPG +VDGMD+RAV Sbjct: 182 YESFNMARLWNLPVIYVIENNRYAMGTSVARASAQTDFSQRGVSFNIPGFKVDGMDVRAV 241 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 KA +AV +CRA KGP+I+EM TYRYRGHSMSDPA YR+++E+ +MRS HDPIEQVR R Sbjct: 242 KAAAVQAVEHCRAGKGPVILEMETYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVRLR 301 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 LL WASE DLK I+ +VR I+ +S +FAQ+D EPD +ELY+DIL+ Sbjct: 302 LLEKGWASEDDLKLIDKDVRDIVADSADFAQADPEPDASELYTDILL 348 >gi|296116184|ref|ZP_06834802.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Gluconacetobacter hansenii ATCC 23769] gi|295977290|gb|EFG84050.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Gluconacetobacter hansenii ATCC 23769] Length = 336 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 189/318 (59%), Positives = 245/318 (77%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + + AY M+LIRRFEE+AGQLYGMG++GGFCHL IGQEAV+VG+ M L +GD++I Sbjct: 18 MTQAELQEAYYQMVLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVVVGIHMELKDGDKII 77 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HG +LA G+ +MAELTGR+GG S GKGGSMHMFS + FYGGHGIVGAQVSL Sbjct: 78 TSYRDHGQMLAAGMTPRGVMAELTGREGGYSHGKGGSMHMFSREKNFYGGHGIVGAQVSL 137 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AFANKYR +D++ V +G+GA+NQGQVYESFN+AAL L ++V+ENN Y MGTSV Sbjct: 138 GIGLAFANKYRGTDEVSVTYYGEGASNQGQVYESFNLAALHKLPCVFVLENNHYGMGTSV 197 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA + G + IPG VDGMD+ AV+ AVA+CRA KGP+++E+ TYRYRG Sbjct: 198 ERASASRELWRNGEPWGIPGFHVDGMDVEAVRNAARDAVAHCRAGKGPVLLEVDTYRYRG 257 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR R E++EMR NHDPI++VRK LL+ +E LK I+ V+ I+ ++ +F Sbjct: 258 HSMSDPAKYRQRSEVDEMRKNHDPIDRVRKELLNMG-TTEDALKAIDAKVKAIVVDASDF 316 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ EPDP+EL++D+L+ Sbjct: 317 AQTSPEPDPSELWTDVLV 334 >gi|254419039|ref|ZP_05032763.1| pyruvate dehydrogenase E1 component, alpha subunit [Brevundimonas sp. BAL3] gi|196185216|gb|EDX80192.1| pyruvate dehydrogenase E1 component, alpha subunit [Brevundimonas sp. BAL3] Length = 342 Score = 384 bits (987), Expect = e-104, Method: Composition-based stats. Identities = 200/351 (56%), Positives = 256/351 (72%), Gaps = 12/351 (3%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 MA P+ +A+ A + +KE L YR M+LIRRFEE+AGQLYG Sbjct: 1 MAKAPAKAAQTTAPDKL----------SNTPSASKEDLLRFYREMVLIRRFEERAGQLYG 50 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQ 133 MG++GGFCHL IGQEAV VG++ S+ +G D++IT YR+HGH+LA G+D ++MAELTGR Sbjct: 51 MGLIGGFCHLYIGQEAVAVGVQESVRQGHDKIITGYRDHGHMLAAGMDPKEVMAELTGRI 110 Query: 134 GGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAAN 193 GG S+GKGGSMHMF GFYGGHGIVGAQVSLGTG+AFA KYR D + V FGDGA+N Sbjct: 111 GGSSRGKGGSMHMFDVPTGFYGGHGIVGAQVSLGTGLAFAGKYRGDDSVAFVYFGDGASN 170 Query: 194 QGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMD 253 QGQVYESFN+A LW L IY+IENNQYAMGTS+ R+S+ T S+RG SF IPG QVDGMD Sbjct: 171 QGQVYESFNMAQLWKLPAIYIIENNQYAMGTSIERSSSTTQLSQRGASFGIPGEQVDGMD 230 Query: 254 IRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQ 313 + AV+ + KAV RA +GP I+E+ TYRYRGHSMSDPA YRT+EE++E++ DPI+ Sbjct: 231 VLAVRDAVKKAVERARAGEGPYILEVKTYRYRGHSMSDPAKYRTKEEVDEVKKTRDPIDH 290 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 ++ L A+E +LK I+ ++ I+ +V+FAQ EPDP+ELY+D+ + Sbjct: 291 IKTLLAAAN-ATEDELKAIDNEIKAIVAEAVQFAQESPEPDPSELYTDVYV 340 >gi|260433372|ref|ZP_05787343.1| pyruvate dehydrogenase E1 component, alpha subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260417200|gb|EEX10459.1| pyruvate dehydrogenase E1 component, alpha subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 329 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 196/324 (60%), Positives = 251/324 (77%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + E+ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KTTKKPNVSAEELKTYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ IT+YR+HGH+LACG+D +MAELTGR GG+SKGKGGSMHMFS + FYGGHGI Sbjct: 65 EEGDKRITSYRDHGHMLACGMDPGGVMAELTGRIGGLSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV LG G+AFA+KY+ + ++ FGDGAANQGQVYE+FN+AA+W L V++VIENNQ Sbjct: 125 VGAQVPLGAGLAFADKYKDNGRVTFTYFGDGAANQGQVYETFNMAAIWQLPVVFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGT+ SR+++ + RG +F IPG V+GMD+ AVK +KAVA+CRA KGP I+E+ Sbjct: 185 YAMGTAQSRSTSTKDIYHRGEAFGIPGEIVNGMDVLAVKEAGEKAVAHCRAGKGPYILEV 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ ++R DPIE VR+ LL K ASE DLK I+ +++I Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKVREQSDPIEHVRELLLSGKHASEDDLKAIDKEIKEI 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N + EFA+ EP EL++DI Sbjct: 305 VNQAAEFAKESPEPPVEELWTDIY 328 >gi|92117295|ref|YP_577024.1| pyruvate dehydrogenase (lipoamide) [Nitrobacter hamburgensis X14] gi|91800189|gb|ABE62564.1| Pyruvate dehydrogenase (lipoamide) [Nitrobacter hamburgensis X14] Length = 340 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 222/319 (69%), Positives = 269/319 (84%), Gaps = 1/319 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 F +EQ+L A R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEA++VGM+M++ EGDQ Sbjct: 22 PAFTREQDLHALRDMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAIVVGMQMAIGEGDQ 81 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT YR+HGH+LACG+DA +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV Sbjct: 82 VITGYRDHGHMLACGMDARGVMAELTGRRGGYSKGKGGSMHMFSKEKNFYGGHGIVGAQV 141 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 SLGTG+AFAN+YR +D++ + FGDGAANQGQVYESFN+A LW L V+Y+IENN+YAMGT Sbjct: 142 SLGTGLAFANRYRGNDRVSLAYFGDGAANQGQVYESFNMAELWKLPVVYIIENNRYAMGT 201 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV+R+SAQT+FS+RG SFNIPG Q+DGMD+RAVKA DKAV +CR GP I+EM TYRY Sbjct: 202 SVTRSSAQTDFSRRGASFNIPGEQIDGMDVRAVKAAGDKAVKWCRDGNGPYILEMQTYRY 261 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE++ +R + DPIEQVR RLL K SE DLK+I+ VR+I+N + Sbjct: 262 RGHSMSDPAKYRTREEVDRVRHDQDPIEQVRNRLLAAKV-SEDDLKKIDAEVREIVNAAA 320 Query: 345 EFAQSDKEPDPAELYSDIL 363 +FAQ+D EPD +ELY+D+ Sbjct: 321 DFAQNDPEPDVSELYTDVY 339 >gi|86138769|ref|ZP_01057341.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter sp. MED193] gi|85824416|gb|EAQ44619.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter sp. MED193] Length = 329 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 198/324 (61%), Positives = 255/324 (78%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + E+ YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KSTKKPNVSAEELTKFYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ IT+YR+HGH+LACG+DA +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGI Sbjct: 65 EEGDKRITSYRDHGHMLACGMDADGVMAELTGREGGLSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV LG G+AF++KY+ + ++ FGDGAANQGQVYE+FN+AA+W+L VI+VIENNQ Sbjct: 125 VGAQVPLGAGLAFSDKYKGNGRVTFTYFGDGAANQGQVYETFNMAAIWDLPVIFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGT+ +R+++ + RG +F IPG VDGMD+ AVKA ++A A+CRA KGP I+E+ Sbjct: 185 YAMGTAQARSTSTPDIYTRGEAFGIPGEAVDGMDVLAVKAASERATAHCRAGKGPYILEV 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MRS DPIEQVR LL K A+E DLK I+ ++++ Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMRSERDPIEQVRDMLLTGKHATEDDLKAIDKEIKEV 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N S EFA++ EP EL++DI Sbjct: 305 VNQSAEFARTSPEPALEELWTDIY 328 >gi|144898635|emb|CAM75499.1| Pyruvate dehydrogenase E1 component subunit alpha [Magnetospirillum gryphiswaldense MSR-1] Length = 333 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 188/320 (58%), Positives = 239/320 (74%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E +Q + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+ + + D Sbjct: 12 AEIGPDQLIGWYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQSAAGDTDS 71 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT+YR+HG +LACG+DA +MAELTGR GG S+GKGGSMHMFS + FYGGHGIVGAQV Sbjct: 72 VITSYRDHGQMLACGMDAKGVMAELTGRSGGYSRGKGGSMHMFSREKRFYGGHGIVGAQV 131 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +GTG+ FA+KY +C V GDGA NQGQVYESFN+AALW L V+YVIENN+YAMGT Sbjct: 132 PIGTGLGFAHKYTGDQGVCHVYLGDGALNQGQVYESFNMAALWKLPVVYVIENNKYAMGT 191 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S R +A KRG ++ IPG VDGM ++A+ +A+ + R+ GP I+EM TYRY Sbjct: 192 SSERHAAGIELFKRGAAYGIPGEAVDGMSVQAIYEAGSRALDHARSGNGPYILEMKTYRY 251 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRT+EE+ +MR HDPI+ ++ RLL E LKE++ V+ I+ + Sbjct: 252 RGHSMSDPAKYRTKEEVTKMREQHDPIDTLKARLLDAGLVDEAALKEMDREVKVIVTEAA 311 Query: 345 EFAQSDKEPDPAELYSDILI 364 EFAQ+ EPD +EL++D+LI Sbjct: 312 EFAQTSPEPDLSELWTDVLI 331 >gi|39935932|ref|NP_948208.1| pyruvate dehydrogenase E1 subunit alpha [Rhodopseudomonas palustris CGA009] gi|39649786|emb|CAE28308.1| pyruvate dehydrogenase E1 alpha subunit [Rhodopseudomonas palustris CGA009] Length = 344 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 236/347 (68%), Positives = 280/347 (80%), Gaps = 7/347 (2%) Query: 18 NPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 P SA + T P V F KEQEL A+ MLLIRRFEEKAGQLYGMG Sbjct: 3 APKKSAAKETTQDKAGGASP----SNVPPFTKEQELGAFLEMLLIRRFEEKAGQLYGMGA 58 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 +GGFCHL IGQEAV+VGM+M+L EGDQ+IT YR+HGH+LACG++A+ +MAELTGR+GG S Sbjct: 59 IGGFCHLYIGQEAVVVGMQMALREGDQVITGYRDHGHMLACGMEANGVMAELTGRRGGYS 118 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHMFS + F+GGHGIVGAQVSLGTGIAFAN+YR ++C+ FGDGAANQGQV Sbjct: 119 KGKGGSMHMFSREKSFFGGHGIVGAQVSLGTGIAFANRYRGDGRVCLAYFGDGAANQGQV 178 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 YESFN+A LW L V+YVIENN+YAMGTSV+R+SAQT+FSKRGVSFNIPG QVDGMD+RAV Sbjct: 179 YESFNMAELWKLPVVYVIENNRYAMGTSVTRSSAQTDFSKRGVSFNIPGEQVDGMDVRAV 238 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKR 317 KA DKAVA+CRA GP I+EM TYRYRGHSMSDPA YR+REE++++R++ DPIEQVRKR Sbjct: 239 KAAGDKAVAHCRAGNGPFILEMQTYRYRGHSMSDPAKYRSREEVDKIRNDQDPIEQVRKR 298 Query: 318 LLHNKW-ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 LL +E DLK I+ VRK++N S +FAQ D EPDP+ELY+D+ Sbjct: 299 LL--GLDMTEDDLKAIDAEVRKVVNESADFAQHDLEPDPSELYTDVY 343 >gi|56697103|ref|YP_167466.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Ruegeria pomeroyi DSS-3] gi|56678840|gb|AAV95506.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Ruegeria pomeroyi DSS-3] Length = 330 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 195/319 (61%), Positives = 249/319 (78%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S + E+ YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ Sbjct: 11 SNTSAEELKHYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDK 70 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 IT+YR+HGH+LACG+D +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQV Sbjct: 71 RITSYRDHGHMLACGMDPGGVMAELTGREGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQV 130 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AFA+KY+ + ++ FGDGAANQGQVYE+FN+AALW L VI+VIENNQYAMGT Sbjct: 131 PLGAGLAFADKYQDNGRVTFTYFGDGAANQGQVYETFNMAALWKLPVIFVIENNQYAMGT 190 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + R+++ + RG +F IPG VDGM++ +VK +KAVA+CRA KGP I+E+ TYRY Sbjct: 191 AQKRSTSSPDIYTRGEAFGIPGETVDGMNVLSVKEAGEKAVAHCRAGKGPYILEVKTYRY 250 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE+ ++R DPIE VR+ LL K A+E DLK I+ +++I+N + Sbjct: 251 RGHSMSDPAKYRTREEVQKVREQSDPIEMVREMLLSGKHATEDDLKAIDKEIKEIVNQAA 310 Query: 345 EFAQSDKEPDPAELYSDIL 363 EF++ EP EL++DI Sbjct: 311 EFSKESPEPSVDELWTDIY 329 >gi|114766441|ref|ZP_01445406.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Pelagibaca bermudensis HTCC2601] gi|114541298|gb|EAU44347.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseovarius sp. HTCC2601] Length = 340 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 192/319 (60%), Positives = 241/319 (75%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + E+ YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ Sbjct: 10 PNVSPEELKQYYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDK 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +T+YR+HGH+LACG+D + +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV Sbjct: 70 RVTSYRDHGHMLACGMDPNGVMAELTGREGGYSKGKGGSMHMFSREKHFYGGHGIVGAQV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AFA+ Y + ++ FGDGAANQGQVYE+FN+A++W L V++VIENNQYAMGT Sbjct: 130 PLGAGLAFADNYLENGRVTFTYFGDGAANQGQVYETFNMASIWKLPVVFVIENNQYAMGT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + R+++ + RG F IPG VDGMD+ VK +KAV +CRA KGP I+E+ TYRY Sbjct: 190 AQKRSTSGEDIYTRGAPFGIPGELVDGMDVLKVKEAGEKAVEHCRAGKGPYILEIKTYRY 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE+ +MR DPI+ VR LL K ASE DLK I+ ++ I+N S Sbjct: 250 RGHSMSDPAKYRTREEVQKMREERDPIQNVRDLLLQGKHASEDDLKAIDKEIKDIVNASA 309 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFA+ EP EL++DI Sbjct: 310 EFAKESPEPALEELWTDIY 328 >gi|312130768|ref|YP_003998108.1| pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit [Leadbetterella byssophila DSM 17132] gi|311907314|gb|ADQ17755.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Leadbetterella byssophila DSM 17132] Length = 338 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 158/325 (48%), Positives = 210/325 (64%), Gaps = 1/325 (0%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 +G +++KEQ L Y M+L R+FEEKAGQLYG + GFCHL IGQEA G +L Sbjct: 6 KGASKVKYSKEQYLYWYDSMVLQRKFEEKAGQLYGQQKIRGFCHLYIGQEACSSGSVSAL 65 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +GD+ ITAYR+HGH LA G D KIMAEL G+ G +KGKGGSMH+F + GF GGHGI Sbjct: 66 KKGDKYITAYRDHGHPLALGTDPGKIMAELYGKVTGTTKGKGGSMHIFDKEVGFMGGHGI 125 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQ+ +G GI FA KY +D +C+ FGDGA QG +E+ N+A W + I+V+ENN Sbjct: 126 VGAQIPMGAGIGFAEKYLGTDNVCICYFGDGAIRQGAFHEALNMAMTWKIPTIFVVENNG 185 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTSV+R S G +++IP VD MD+ V + +A R +GP +E Sbjct: 186 YAMGTSVARTSNVRELYTLGEAYDIPSEAVDAMDVEIVHEAVSRAAERARKGEGPSFLEF 245 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDP YRT+EE+ E DPIE ++ R+L N A++ +L I+ V+K Sbjct: 246 KTYRYRGHSMSDPQKYRTKEEVAEW-KQRDPIELIKDRILTNGIATQEELDAIDEKVKKQ 304 Query: 340 INNSVEFAQSDKEPDPAELYSDILI 364 ++ +V+FA+ P P E + DI + Sbjct: 305 VDEAVKFAEESPWPKPEEAFEDIYV 329 >gi|57239478|ref|YP_180614.1| pyruvate dehydrogenase E1 component, alpha subunit [Ehrlichia ruminantium str. Welgevonden] gi|58617510|ref|YP_196709.1| pyruvate dehydrogenase E1 component, alpha subunit [Ehrlichia ruminantium str. Gardel] gi|57161557|emb|CAH58484.1| pyruvate dehydrogenase E1 component, alpha subunit [Ehrlichia ruminantium str. Welgevonden] gi|58417122|emb|CAI28235.1| Pyruvate dehydrogenase E1 component, alpha subunit [Ehrlichia ruminantium str. Gardel] Length = 329 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 180/318 (56%), Positives = 236/318 (74%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 K+Q ++ Y MLLIRRFEEK+GQLYGMG++GGFCHL IGQEA+ VG++ S+ EGD + Sbjct: 8 NLTKQQLINCYHDMLLIRRFEEKSGQLYGMGLIGGFCHLYIGQEAIAVGIQHSIIEGDSI 67 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YR+HG +L+ G D +MAEL G+ G S GKGGSMHMF+ + F+GGHGIVGAQV Sbjct: 68 ITSYRDHGFMLSSGTDPKYVMAELMGKSTGCSGGKGGSMHMFNIEKQFFGGHGIVGAQVP 127 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +GTGIA ANKY++++ + CFGDGA NQGQVYE+FN+AALW L V+YVIENN+YAMGTS Sbjct: 128 IGTGIALANKYKKNNNVVFTCFGDGATNQGQVYEAFNMAALWKLPVVYVIENNEYAMGTS 187 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 VSR+S T+ K+G SF IPG Q+DGMD+ AV A AYCR GPI++EM TYRYR Sbjct: 188 VSRSSYITDLYKKGESFGIPGYQIDGMDLFAVIKAATDAAAYCREQNGPILLEMKTYRYR 247 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YR++EE+ +++ DP+ ++ ++ NK SE D + + +R I+ SVE Sbjct: 248 GHSMSDPAKYRSKEEVEKVKEEKDPLINLKNYMISNKIISEEDCNKYDKEIRNIVKESVE 307 Query: 346 FAQSDKEPDPAELYSDIL 363 F+Q+ EP LY+D+ Sbjct: 308 FSQNSSEPAVNTLYTDVY 325 >gi|83311415|ref|YP_421679.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Magnetospirillum magneticum AMB-1] gi|82946256|dbj|BAE51120.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component [Magnetospirillum magneticum AMB-1] Length = 332 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 184/321 (57%), Positives = 238/321 (74%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +E ++ + YR MLLIRRFEEKAGQLYGMG++ GFCHL IGQEAV+VGM+ D Sbjct: 10 AAEPTPQELIRYYREMLLIRRFEEKAGQLYGMGLINGFCHLYIGQEAVVVGMQAVAGAAD 69 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 IT+YR+HGH+L CG+D +MAELTGR GG S+GKGGSMHMFS + FYGGHGIVGAQ Sbjct: 70 SCITSYRDHGHMLVCGMDPKGVMAELTGRAGGYSRGKGGSMHMFSREKRFYGGHGIVGAQ 129 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V LGTG+ FA+KY + + + V GDGA NQGQVYE+FN+AALW L V++VIENN+YAMG Sbjct: 130 VPLGTGLGFAHKYSKDNGVAHVYCGDGAVNQGQVYEAFNMAALWKLPVVFVIENNKYAMG 189 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TS R +A RG ++ IPG V+GM+I AV+ +A+ + R+ GP I+EM TYR Sbjct: 190 TSTVRHAAGQELYMRGAAYGIPGEPVNGMNIIAVRDAAARALEHARSGNGPYILEMNTYR 249 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR++EE+ +MR HDPI+Q++++LL E LKEI+ V+ I+ + Sbjct: 250 YRGHSMSDPAKYRSKEEVTKMREQHDPIDQLKEKLLAEGLIDEAGLKEIDREVKVIVTEA 309 Query: 344 VEFAQSDKEPDPAELYSDILI 364 EF+QS EPDP+EL++D+LI Sbjct: 310 AEFSQSSPEPDPSELWTDVLI 330 >gi|126739338|ref|ZP_01755031.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter sp. SK209-2-6] gi|126719438|gb|EBA16147.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter sp. SK209-2-6] Length = 329 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 195/324 (60%), Positives = 255/324 (78%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + + ++ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KSTKKTNVSADELLQFYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ IT+YR+HGH+LACG+DA +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGI Sbjct: 65 EEGDKRITSYRDHGHMLACGMDAGGVMAELTGREGGLSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV LG G+AFA+KY + ++ FGDGAANQGQVYE+FN+AA+W+L V++VIENNQ Sbjct: 125 VGAQVPLGAGLAFADKYLDNGRVTFTYFGDGAANQGQVYETFNMAAIWDLPVVFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGT+ +R+++ + RG +F IPG VDGM++ +VK ++AVA+CRA KGP I+E+ Sbjct: 185 YAMGTAQARSTSTPDIYTRGEAFGIPGEAVDGMNVLSVKEASERAVAHCRAGKGPYILEV 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MRS DPIEQVR LL K ASE DLK I+ ++ + Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMRSERDPIEQVRDMLLTGKHASEDDLKAIDKEIKDV 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N + +FA++ EP EL++DI Sbjct: 305 VNEAADFARTSPEPGLEELWTDIY 328 >gi|114799576|ref|YP_760677.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase subunit alpha [Hyphomonas neptunium ATCC 15444] gi|114739750|gb|ABI77875.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, alpha subunit [Hyphomonas neptunium ATCC 15444] Length = 336 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 194/314 (61%), Positives = 247/314 (78%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYR 110 + L+ YR MLLIRRFEEKAGQLYGMG + GFCHL IGQEAV+ GM+ L EGDQ+IT YR Sbjct: 19 EMLAFYREMLLIRRFEEKAGQLYGMGKIAGFCHLYIGQEAVVTGMQACLKEGDQVITGYR 78 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 +HGH+LAC +D +MAELTGR GG S+GKGGSMHMFS + FYGGHGIVGAQV LGTG+ Sbjct: 79 DHGHMLACQMDPKGVMAELTGRVGGYSRGKGGSMHMFSKEKNFYGGHGIVGAQVPLGTGL 138 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 AFANKYR +D + + FGDGAANQGQVYE+FN+A+LW L V+YVIENN YAMGTSV R + Sbjct: 139 AFANKYRGNDNVSLAYFGDGAANQGQVYEAFNMASLWKLPVVYVIENNMYAMGTSVERHA 198 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 ++ KRG+SF I G +VDGMD+ AV+ +KAV + RA KGP I+EM TYRYRGHSMS Sbjct: 199 SEVELFKRGISFEIEGEEVDGMDVLAVREAGEKAVKHARAGKGPYILEMKTYRYRGHSMS 258 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 DPA YR REE++++RS+HDPIE ++ ++L A+E +LK+I+ ++ I+ + +F+ Sbjct: 259 DPAKYRKREEVDDIRSHHDPIEGLKGQILEQGHATEDELKKIDNEIKAIVKEAADFSLES 318 Query: 351 KEPDPAELYSDILI 364 EPD +EL++D+LI Sbjct: 319 PEPDASELWTDVLI 332 >gi|115524619|ref|YP_781530.1| pyruvate dehydrogenase (acetyl-transferring) [Rhodopseudomonas palustris BisA53] gi|115518566|gb|ABJ06550.1| Pyruvate dehydrogenase (acetyl-transferring) [Rhodopseudomonas palustris BisA53] Length = 346 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 228/322 (70%), Positives = 277/322 (86%), Gaps = 1/322 (0%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 + EF+KEQ+L A R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEA++VGM+M+L Sbjct: 24 PPRIVEFSKEQDLRALRDMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAIVVGMQMALK 83 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 +GDQ+IT YR+HGH+LACG+DA +MAELTGR+GG SKGKGGSMHMFS++ FYGGHGIV Sbjct: 84 QGDQVITGYRDHGHMLACGMDAKGVMAELTGRRGGYSKGKGGSMHMFSSEKHFYGGHGIV 143 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN+YR +D + + FGDGA+NQGQVYESFN+A LW L VIYVIENN+Y Sbjct: 144 GAQVSLGTGLAFANRYRGNDNVSLAYFGDGASNQGQVYESFNMAELWKLPVIYVIENNRY 203 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTSV R+SAQT+F+KRGVSFNIPG QVDGMD+RAVKA D+AVAYCRA KGP I+EM Sbjct: 204 AMGTSVKRSSAQTDFAKRGVSFNIPGDQVDGMDVRAVKAAGDRAVAYCRAGKGPYILEMQ 263 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YRTREE++++R++ DPIEQVR+RLL + SE +LK I+ VR+I+ Sbjct: 264 TYRYRGHSMSDPAKYRTREEVDKVRNDQDPIEQVRQRLLRMRV-SEQELKAIDAEVREIV 322 Query: 341 NNSVEFAQSDKEPDPAELYSDI 362 N S EFAQ+D EP+ +EL++D+ Sbjct: 323 NASAEFAQNDPEPEASELWTDV 344 >gi|254474655|ref|ZP_05088041.1| pyruvate dehydrogenase E1 component, alpha subunit [Ruegeria sp. R11] gi|214028898|gb|EEB69733.1| pyruvate dehydrogenase E1 component, alpha subunit [Ruegeria sp. R11] Length = 337 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 197/324 (60%), Positives = 250/324 (77%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + E+ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KSVKKPNVSAEELLEYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ IT+YR+HGH+LACG+D + +MAELTGR+GG SKGKGGSMHMFS + FYGGHGI Sbjct: 65 EEGDKRITSYRDHGHMLACGMDPNGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV LG G+AF++KY+ +D++ FGDGAANQGQVYE++N+A LW+L VI+VIENNQ Sbjct: 125 VGAQVPLGAGLAFSDKYKGNDRVTFTYFGDGAANQGQVYETYNMAQLWDLPVIFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTSV R++ KRG ++ I G +VDGM++ AVK ++AVA+CRA KGP I+E+ Sbjct: 185 YAMGTSVQRSTKSPALWKRGEAYGIAGEEVDGMNVLAVKEAGERAVAHCRAGKGPYILEV 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR DPIEQVR LL ASE DLK I+ ++ I Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMREERDPIEQVRDMLLTGNHASEDDLKAIDKEIKDI 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N S +FA+ EP EL++DI Sbjct: 305 VNKSADFAKESPEPALEELWTDIY 328 >gi|188582154|ref|YP_001925599.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium populi BJ001] gi|179345652|gb|ACB81064.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium populi BJ001] Length = 349 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 213/343 (62%), Positives = 268/343 (78%), Gaps = 1/343 (0%) Query: 23 AKRAATSSVDCVDIPF-LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGF 81 A A D P + +F K+++L AYR MLLIRRFEEKAGQLYGMG++GGF Sbjct: 3 AASEAGKPAAGTDAPQHRPAPNIPQFTKDEDLHAYREMLLIRRFEEKAGQLYGMGLIGGF 62 Query: 82 CHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKG 141 CHL IGQEAV+VGM+M+ +GDQ IT YR+HGH+LACG+D +MAELTGR+GG S+GKG Sbjct: 63 CHLYIGQEAVVVGMQMAGEDGDQNITGYRDHGHMLACGMDPKGVMAELTGRRGGYSRGKG 122 Query: 142 GSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESF 201 GSMHMFS + F+GGHGIVGAQV+LGTG+AFA+ Y ++ K+ GDGAANQGQVYESF Sbjct: 123 GSMHMFSREKQFFGGHGIVGAQVALGTGLAFADAYLKNGKVSFTYMGDGAANQGQVYESF 182 Query: 202 NIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATM 261 N+AALW L V+YVIENN+YAMGTSV+RASAQT+FSKRG+SF IPG QVDGMD+R V+ Sbjct: 183 NMAALWKLPVVYVIENNRYAMGTSVARASAQTDFSKRGLSFGIPGEQVDGMDVRTVRVAA 242 Query: 262 DKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHN 321 +A+ + R+ +GP I+EM TYRYRGHSMSDPA YR+++E+++MR HDPIE VRKRLL Sbjct: 243 ARAINHARSGEGPYILEMQTYRYRGHSMSDPAKYRSKDEVSKMRDEHDPIEMVRKRLLEA 302 Query: 322 KWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 E +LK ++ VR+I+N S +FA D EPDP+EL++DIL+ Sbjct: 303 HGVPEAELKSVDAKVREIVNESADFATHDPEPDPSELWTDILL 345 >gi|62858729|ref|NP_001017072.1| pyruvate dehydrogenase E1 alpha 1 isoform 2 [Xenopus (Silurana) tropicalis] gi|89266821|emb|CAJ83395.1| pyruvate dehydrogenase (lipoamide) alpha 1 [Xenopus (Silurana) tropicalis] Length = 395 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 177/363 (48%), Positives = 239/363 (65%), Gaps = 7/363 (1%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSE--FNKEQELSAYRLMLL 61 A++ VT + +A AT + D+ LE ++ +EQ L YR M Sbjct: 16 AQKPVTAVRVMVASRNYADFASEATFDIKKCDVHRLEEGPPTQAVLTREQGLQYYRTMQT 75 Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 IRR E K+ QLY ++ GFCHL GQEA VG++ ++ D +ITAYR HG+ GV Sbjct: 76 IRRMELKSDQLYKQKIIRGFCHLYDGQEACCVGLEAAINPTDHLITAYRAHGYSYTRGVS 135 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A K+ D+ Sbjct: 136 VKEILAELTGRRGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALACKFFGKDE 193 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 ICV +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG Sbjct: 194 ICVALYGDGAANQGQIFETYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDY 253 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREE 300 IPG++VDGMD+ V+ A +CR+ KGPI++E+ TYRY GHSMSDP +YRTREE Sbjct: 254 --IPGLRVDGMDVLCVREATQFAADHCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREE 311 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 I E+RS DPI ++ R+L+N +S +LKEI++ VRK I + +FA +D EP E+ + Sbjct: 312 IQEVRSKSDPITLLKDRMLNNNLSSVEELKEIDVEVRKEIEEAAQFATTDPEPPLEEIAN 371 Query: 361 DIL 363 I Sbjct: 372 HIY 374 >gi|83593216|ref|YP_426968.1| pyruvate dehydrogenase (lipoamide) [Rhodospirillum rubrum ATCC 11170] gi|83576130|gb|ABC22681.1| Pyruvate dehydrogenase (lipoamide) [Rhodospirillum rubrum ATCC 11170] Length = 336 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 196/324 (60%), Positives = 250/324 (77%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G + + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ Sbjct: 11 GSSPATPTPDDIKGFYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLQCQAH 70 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 GD +IT+YR+HGH+LA G+D +MAELTGR+GG SKGKGGSMHMFS +NGFYGGHGIV Sbjct: 71 PGDSIITSYRDHGHMLAAGMDPKGVMAELTGRRGGYSKGKGGSMHMFSKENGFYGGHGIV 130 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQV LGTG+AFA+KYR +C GDGAANQGQVYESFN+AALW L VIYVIENN+Y Sbjct: 131 GAQVPLGTGLAFAHKYRGDGGVCFCYLGDGAANQGQVYESFNMAALWKLPVIYVIENNKY 190 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 MGTSV RASA + + RG ++ IPG+ V+GMD+ AVKA ++AV RA +GP+I+EM Sbjct: 191 GMGTSVERASATKDLATRGAAYGIPGISVNGMDVLAVKAESEEAVDRVRAGEGPLILEMK 250 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YRT+EE+++MR+ DPI+ +R+ ++ + E LKEI+ ++ ++ Sbjct: 251 TYRYRGHSMSDPAKYRTKEEVSKMRAESDPIDHLRQTIVSDAILDEEALKEIDKEIKSVV 310 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 + + EFAQ+ EPD AELY+D+L+ Sbjct: 311 SQAAEFAQNSPEPDAAELYTDVLV 334 >gi|163852205|ref|YP_001640248.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium extorquens PA1] gi|218530964|ref|YP_002421780.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Methylobacterium chloromethanicum CM4] gi|240139535|ref|YP_002964011.1| pyruvate dehydrogenase E1 alpha subunit [Methylobacterium extorquens AM1] gi|254561951|ref|YP_003069046.1| pyruvate dehydrogenase E1 subunit alpha [Methylobacterium extorquens DM4] gi|22652783|gb|AAN03811.1|AF497851_1 pyruvate dehydrogenase E1 component alpha subunit [Methylobacterium extorquens AM1] gi|163663810|gb|ABY31177.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium extorquens PA1] gi|218523267|gb|ACK83852.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium chloromethanicum CM4] gi|240009508|gb|ACS40734.1| pyruvate dehydrogenase E1 alpha subunit [Methylobacterium extorquens AM1] gi|254269229|emb|CAX25195.1| pyruvate dehydrogenase E1 alpha subunit [Methylobacterium extorquens DM4] Length = 349 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 210/325 (64%), Positives = 263/325 (80%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + +F K+++L AYR ML IRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+M+ Sbjct: 21 PAPNIPQFTKDEDLHAYREMLSIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQMAG 80 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +GDQ IT YR+HGH+LACG+D +MAELTGR+GG S+GKGGSMHMFS + F+GGHGI Sbjct: 81 EDGDQNITGYRDHGHMLACGMDPKGVMAELTGRRGGYSRGKGGSMHMFSREKQFFGGHGI 140 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV+LGTG+AFA+ Y ++ K+ GDGAANQGQVYESFN+AALW L V+YVIENN+ Sbjct: 141 VGAQVALGTGLAFADAYLKNGKVSFTYMGDGAANQGQVYESFNMAALWKLPVVYVIENNR 200 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTSV+RASAQT+FSKRG+SF IPG QVDGMD+R V+ +A+ + R+ +GP I+EM Sbjct: 201 YAMGTSVARASAQTDFSKRGLSFGIPGEQVDGMDVRTVREAAARAINHARSGEGPYILEM 260 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRT++E+++MR HDPIE VRKRLL E +LK I+ VR+I Sbjct: 261 QTYRYRGHSMSDPAKYRTKDEVSKMRDEHDPIEMVRKRLLEAHGVPEAELKSIDAKVREI 320 Query: 340 INNSVEFAQSDKEPDPAELYSDILI 364 +N S +FA D EPDP+EL++DIL+ Sbjct: 321 VNESADFATHDPEPDPSELWTDILL 345 >gi|110680207|ref|YP_683214.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter denitrificans OCh 114] gi|109456323|gb|ABG32528.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter denitrificans OCh 114] Length = 336 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 199/324 (61%), Positives = 250/324 (77%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + E+ + Y+ MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KAAKKPNVSAEELTAYYKDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ IT+YR+HGH+LACG+D + +MAELTGR+GG SKGKGGSMHMFS + FYGGHGI Sbjct: 65 EEGDKRITSYRDHGHMLACGMDPNGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V AQV LG G+AFA+KY + ++ FGDGAANQGQVYE+FN+AALW+L I+VIENNQ Sbjct: 125 VAAQVPLGAGLAFADKYLDNKRVTFTYFGDGAANQGQVYEAFNMAALWDLPCIFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTS R+++ +RG +F IPG VDGMD+ AVKA D AVA+CR+ KGP I+E+ Sbjct: 185 YAMGTSQQRSTSSDEIYERGRAFGIPGEAVDGMDVIAVKAAGDTAVAHCRSGKGPYILEI 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR DPIEQVR LL K A+E DLK I+ ++ I Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMRDERDPIEQVRSMLLTGKHATEDDLKAIDKEIKAI 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N S EFA++ EPD EL++DI Sbjct: 305 VNESAEFAKTSPEPDLKELWTDIY 328 >gi|126725377|ref|ZP_01741219.1| Pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacterales bacterium HTCC2150] gi|126704581|gb|EBA03672.1| Pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacterales bacterium HTCC2150] Length = 331 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 196/319 (61%), Positives = 247/319 (77%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S +KE+ S YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ Sbjct: 10 SNVDKEELFSHYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAATKEGDK 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +T+YR+HGH+LACG+D +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV Sbjct: 70 RVTSYRDHGHMLACGMDPKGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVGAQV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +G G+AFA+KY +D + FGDGAANQGQ+YE+FN+A+LW L VI+V+ENNQYAMGT Sbjct: 130 PIGAGLAFADKYLGNDNVSFAYFGDGAANQGQIYETFNMASLWKLPVIFVVENNQYAMGT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S+ RAS+ RG +F I G VDGMD+ AVKA +KAVA+CRA KGP I+EM TYRY Sbjct: 190 SLQRASSSPELYTRGAAFGISGEAVDGMDVLAVKAAGEKAVAHCRAGKGPYILEMKTYRY 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTR+E+ +MR DPI+ VR LL A+E LKEI+ ++K++N + Sbjct: 250 RGHSMSDPAKYRTRDEVQKMREERDPIDHVRDILLAAGHATEDSLKEIDKEIKKVVNEAA 309 Query: 345 EFAQSDKEPDPAELYSDIL 363 EF++ P +EL++DI Sbjct: 310 EFSKESPLPALSELWTDIY 328 >gi|46202886|ref|ZP_00208699.1| COG1071: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Magnetospirillum magnetotacticum MS-1] Length = 332 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 182/321 (56%), Positives = 239/321 (74%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +E ++ + YR MLLIRRFEEKAGQLYGMG++ GFCHL IGQEAV+VGM+ D Sbjct: 10 AAEPTPQELIRYYREMLLIRRFEEKAGQLYGMGLINGFCHLYIGQEAVVVGMQAVAGAAD 69 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 IT+YR+HGH+L CG+D +MAELTGR GG S+GKGGSMHMFS + FYGGHGIVGAQ Sbjct: 70 SCITSYRDHGHMLVCGMDPKGVMAELTGRAGGYSRGKGGSMHMFSREKRFYGGHGIVGAQ 129 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V LGTG+ FA+KY + + + V GDGA NQGQVYE+FN+A+LW L V++VIENN+YAMG Sbjct: 130 VPLGTGLGFAHKYSKDNGVAHVYCGDGAVNQGQVYEAFNMASLWKLPVVFVIENNKYAMG 189 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TS R +A RG ++ IPG V+GM + AV+ +A+ + R+ +GP I+EM TYR Sbjct: 190 TSTIRHAAGQELYMRGAAYGIPGEPVNGMSVIAVREAAARALEHARSGQGPYILEMNTYR 249 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR++EE+ +MR HDPI+Q++++LL + E LKEI+ V+ I+ + Sbjct: 250 YRGHSMSDPAKYRSKEEVTKMREQHDPIDQLKEKLLADGLIDEAGLKEIDREVKVIVTEA 309 Query: 344 VEFAQSDKEPDPAELYSDILI 364 EF+QS EPDP+EL++D+LI Sbjct: 310 AEFSQSSPEPDPSELWTDVLI 330 >gi|254511643|ref|ZP_05123710.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacteraceae bacterium KLH11] gi|221535354|gb|EEE38342.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacteraceae bacterium KLH11] Length = 329 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 194/324 (59%), Positives = 252/324 (77%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + E+ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KTTKKPNVSAEELKTYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ IT+YR+HGH+LACG++ +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGI Sbjct: 65 KEGDKRITSYRDHGHMLACGMEPGGVMAELTGREGGLSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV LG G+AFA+KY+ + + FGDGAANQGQVYE+FN+AA+W+L VI+VIENNQ Sbjct: 125 VGAQVPLGAGLAFADKYKENGGVTFTYFGDGAANQGQVYETFNMAAIWDLPVIFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGT+ +R+++ + RG +F IPG V+GMD+ AVK +KAVA+CRA KGP I+E+ Sbjct: 185 YAMGTAQTRSTSTKDIYHRGEAFGIPGEIVNGMDVLAVKEAGEKAVAHCRAGKGPYILEV 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ ++R DPIE VR+ LL K ASE DLK I+ +++I Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKVREQSDPIEHVRELLLTGKHASEDDLKAIDKEIKEI 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N + EF++ EP EL++DI Sbjct: 305 VNQAAEFSKESPEPSLDELWTDIY 328 >gi|242399614|ref|YP_002995039.1| Pyruvate dehydrogenase [Thermococcus sibiricus MM 739] gi|242266008|gb|ACS90690.1| Pyruvate dehydrogenase [Thermococcus sibiricus MM 739] Length = 332 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 126/320 (39%), Positives = 180/320 (56%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + E KE+ L Y M+ IR EE+ +L+ G + GF HL IG+EAV G+ L + D Sbjct: 1 MLEIPKEKLLWIYETMVKIREHEERVAELFAQGKIPGFVHLYIGEEAVATGVMAHLRKED 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A G + MAEL G+ GI KGKGGSMH+ G G +GIVG Sbjct: 61 FITSTHRGHGHFIAKGGNIKASMAELFGKATGICKGKGGSMHIADLDVGELGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G A K D + V FGDGA+NQ +E+ N+AA+W L V++V ENN Y + Sbjct: 121 IPHAVGAALGIKLNGLDNVAVAFFGDGASNQQNFHEAINLAAIWKLPVVFVCENNLYQIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S+ A + ++R V++ IPG+ VDG D+ AV +A+ R +GP IIE TYR Sbjct: 181 LPYSKQQAIKSVAERAVAYGIPGVSVDGQDVFAVYEVAKEAIERARNGEGPTIIEAKTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGH DP YR++EEI ++N DPI K +L ++ +L + V+K I + Sbjct: 241 YRGHFEGDPQIYRSKEEIEWWKNNKDPITIFEKTVLEKGLLTKEELDAVREKVKKEIEEA 300 Query: 344 VEFAQSDKEPDPAELYSDIL 363 ++FA+ P P EL D+ Sbjct: 301 IKFAEESPWPKPEELLEDVF 320 >gi|163731359|ref|ZP_02138806.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter litoralis Och 149] gi|161394813|gb|EDQ19135.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseobacter litoralis Och 149] Length = 336 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 199/324 (61%), Positives = 251/324 (77%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + S + E+ + Y+ MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KAAKKSNVSAEELTAYYKDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ IT+YR+HGH+LACG+D + +MAELTGR+GG SKGKGGSMHMFS + FYGGHGI Sbjct: 65 EEGDKRITSYRDHGHMLACGMDPNGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V AQV LG G+AFA+KY + ++ FGDGAANQGQVYE+FN+AALW+L ++VIENNQ Sbjct: 125 VAAQVPLGAGLAFADKYLDNKRVTFTYFGDGAANQGQVYEAFNMAALWDLPCVFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTS R+++ +RG +F IPG VDGMD+ AVKA D AVA+CR+ KGP I+E+ Sbjct: 185 YAMGTSQQRSTSSDEIYERGRAFGIPGEAVDGMDVIAVKAAGDTAVAHCRSGKGPYILEI 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR DPIEQVR LL K A+E DLK I+ ++ I Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMRDERDPIEQVRSMLLTGKHATEEDLKAIDKEIKAI 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N S EFA++ EPD EL++DI Sbjct: 305 VNESAEFAKTSPEPDLEELWTDIY 328 >gi|148550593|ref|YP_001260032.1| pyruvate dehydrogenase (acetyl-transferring) [Sphingomonas wittichii RW1] gi|148503012|gb|ABQ71265.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphingomonas wittichii RW1] Length = 360 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 196/350 (56%), Positives = 252/350 (72%), Gaps = 2/350 (0%) Query: 16 ALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGM 75 A + + A+RA+ SS + + + L YR MLLIRRFEEKAGQLYG Sbjct: 9 AESRAGPARRASVSSGSASNRERPAEPVRYQATNAEMLELYRQMLLIRRFEEKAGQLYGF 68 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQG 134 GM+GGFCHL IGQEAV VG++ ++ G D +IT YR+HGH+LA G+D IMAELTGR Sbjct: 69 GMIGGFCHLYIGQEAVAVGLQSAMRVGKDSVITGYRDHGHMLAYGIDPKVIMAELTGRAA 128 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 GIS+GKGGSMHMFS +GFYGGHGIVGAQV LGTG+AF +KY +C+ FGDGAANQ Sbjct: 129 GISRGKGGSMHMFSVDHGFYGGHGIVGAQVGLGTGLAFKHKYADDGGVCLTYFGDGAANQ 188 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 GQVYESFN+A LW L VI+VIENNQYAMGTSV+RASA+ +RG SF IPG+QVDGMD+ Sbjct: 189 GQVYESFNMAELWKLPVIFVIENNQYAMGTSVNRASAEDQLYRRGESFRIPGIQVDGMDV 248 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV+ ++A + + KGPI++E+ TYRYRGHSMSDPA YR+REE+ +R D IE + Sbjct: 249 LAVRGAAEEARQWVLSGKGPILLELKTYRYRGHSMSDPAKYRSREEVQAVRDKSDAIEHL 308 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 ++ L +E +LK +E +R+I+ + +FA+ EP+ AELY+D+L+ Sbjct: 309 KQELEAAGV-TEDELKALEKEIRQIVQEAADFAEQAPEPELAELYTDVLV 357 >gi|258542312|ref|YP_003187745.1| pyruvate dehydrogenase E1 component subunit alpha [Acetobacter pasteurianus IFO 3283-01] gi|256633390|dbj|BAH99365.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-01] gi|256636449|dbj|BAI02418.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-03] gi|256639502|dbj|BAI05464.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-07] gi|256642558|dbj|BAI08513.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-22] gi|256645613|dbj|BAI11561.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-26] gi|256648666|dbj|BAI14607.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-32] gi|256651719|dbj|BAI17653.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654710|dbj|BAI20637.1| pyruvate dehydrogenase E1 component alpha subunit [Acetobacter pasteurianus IFO 3283-12] Length = 336 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 197/318 (61%), Positives = 246/318 (77%), Gaps = 1/318 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++Q L AY MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++MSL +GD+ Sbjct: 16 PSLTRDQFLKAYYDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGIQMSLKDGDK 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT+YR+HG +L G+ +MAELTGR G S GKGGSMHMFS + FYGGHGIVGAQV Sbjct: 76 LITSYRDHGQMLVAGMTPRGVMAELTGRSTGYSHGKGGSMHMFSREKNFYGGHGIVGAQV 135 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 SLG G+AFANKYR +D++ V FGDGAANQGQVYESFN+AAL L I+VIENN+Y MGT Sbjct: 136 SLGIGLAFANKYRDTDEVSVAYFGDGAANQGQVYESFNLAALLKLPCIFVIENNRYGMGT 195 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +V RASA K G + IPG +VDGMD+ AV A ++AV +CR KGP ++EM+TYRY Sbjct: 196 AVERASASHELYKNGEPWGIPGKRVDGMDVAAVYAAAEEAVKHCREGKGPYLLEMMTYRY 255 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTR+E++E+R DPIE V+ LL + +E +LK +E ++ I+N+S Sbjct: 256 RGHSMSDPAKYRTRDEVDEVRKTRDPIEHVKHILLDSGV-TEAELKTMETEIKGIVNDSA 314 Query: 345 EFAQSDKEPDPAELYSDI 362 EFAQ+ EPDPAELY+D+ Sbjct: 315 EFAQTSPEPDPAELYTDV 332 >gi|302383094|ref|YP_003818917.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Brevundimonas subvibrioides ATCC 15264] gi|302193722|gb|ADL01294.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Brevundimonas subvibrioides ATCC 15264] Length = 349 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 197/324 (60%), Positives = 250/324 (77%), Gaps = 2/324 (0%) Query: 42 FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTE 101 V KE+ L+ YR M+LIRRFEE+AGQLYGMG++GGFCHL IGQEAV VG++ S+ + Sbjct: 18 PNVPTATKEELLAFYREMVLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVAVGVQASVKQ 77 Query: 102 G-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 G D++IT YR+HGH+LA G+D ++MAELTGR GG SKGKGGSMHMF GFYGGHGIV Sbjct: 78 GHDKIITGYRDHGHMLAAGMDPKEVMAELTGRSGGSSKGKGGSMHMFDVPTGFYGGHGIV 137 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQV+LGTG+AFA KYR D + + FGDGAANQGQVYESFN+A LW L IY+IENNQY Sbjct: 138 GAQVALGTGLAFAGKYRGDDSVAFIYFGDGAANQGQVYESFNMAQLWKLPAIYIIENNQY 197 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS+ R+S+ T+ + RG SF IPG VDGMD+ AVK +++AV RA +GP I+E+ Sbjct: 198 AMGTSIERSSSTTDLAHRGASFGIPGELVDGMDVLAVKDAVERAVKRARAGEGPFILEVK 257 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YRT+EE++E++ DPI+ V K LL A+E ++K I+ V+ I+ Sbjct: 258 TYRYRGHSMSDPAKYRTKEEVDEVKKTRDPIDHV-KMLLDQAKATEDEIKAIDAEVKAIV 316 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +V+FAQ EPDP+ELY+D+ + Sbjct: 317 AEAVQFAQESPEPDPSELYTDVYL 340 >gi|163746654|ref|ZP_02154011.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Oceanibulbus indolifex HEL-45] gi|161379768|gb|EDQ04180.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Oceanibulbus indolifex HEL-45] Length = 335 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 195/324 (60%), Positives = 243/324 (75%), Gaps = 1/324 (0%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + E+ S YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KSSKKPNVSAEELTSYYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ IT+YR+HGH+LACG+D + +MAELTGR+GG SKGKGGSMHMFS + FYGGHGI Sbjct: 65 EEGDKRITSYRDHGHMLACGMDPNGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V AQV LG G+AFA++Y+ + ++ FGDGAANQGQVYE+FN+AALW L VI+VIENNQ Sbjct: 125 VAAQVPLGAGLAFADQYKDNGRVTFTYFGDGAANQGQVYETFNMAALWKLPVIFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTS R+++ +RG +F IPG VDGMD+ AVK KAVA+ R GP I+E+ Sbjct: 185 YAMGTSQQRSTSSAEIWERGKAFGIPGEAVDGMDVLAVKEAGQKAVAHARK-DGPYILEI 243 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR DPIE VR LL A+E DLK I+ ++KI Sbjct: 244 KTYRYRGHSMSDPAKYRTREEVQKMRDERDPIESVRTLLLEGNHATEDDLKAIDKEIKKI 303 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N EFA+ EP EL++DI Sbjct: 304 VNEGAEFAKESPEPALDELWTDIY 327 >gi|87199925|ref|YP_497182.1| pyruvate dehydrogenase (lipoamide) [Novosphingobium aromaticivorans DSM 12444] gi|87135606|gb|ABD26348.1| Pyruvate dehydrogenase (lipoamide) [Novosphingobium aromaticivorans DSM 12444] Length = 381 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 193/320 (60%), Positives = 246/320 (76%), Gaps = 2/320 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQ 104 + + + L Y M+LIRRFEEKAGQLYG+G++GGFCHL IGQEAV VG++ +L EG D Sbjct: 60 DASDAELLKFYEQMVLIRRFEEKAGQLYGLGLIGGFCHLYIGQEAVAVGLQSALKEGHDS 119 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT YR+HGH+LA G+D IMAELTGR GIS+GKGGSMHMFST + FYGGHGIVGAQV Sbjct: 120 VITGYRDHGHMLAYGIDPKVIMAELTGRGAGISRGKGGSMHMFSTDHKFYGGHGIVGAQV 179 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AFA+KYR D +C+ FGDGAANQGQVYE+FN+AALW L +I+V+ENN YAMGT Sbjct: 180 PLGAGLAFAHKYRGDDGVCMAYFGDGAANQGQVYETFNMAALWKLPIIFVVENNGYAMGT 239 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +V R SA+T F +RG +F IPGM V+GMD+ V+ + A+ Y RA GP+++E+ TYRY Sbjct: 240 AVKRGSAETEFYRRGTAFRIPGMDVNGMDVLEVRQAAEVALEYVRAGNGPVLMELNTYRY 299 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR+REE+ EMR HDPIE + LL +E +KEI+ +R+I+ S Sbjct: 300 RGHSMSDPAKYRSREEVQEMRDKHDPIEGAKAELLKRGV-TEDKIKEIDKRIRQIVAESA 358 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FA++ EPD AELY+D+L+ Sbjct: 359 DFAETSPEPDMAELYTDVLV 378 >gi|163736625|ref|ZP_02144044.1| phosphoglycerate kinase [Phaeobacter gallaeciensis BS107] gi|161390495|gb|EDQ14845.1| pyruvate dehydrogenase E1 component subunit alpha [Phaeobacter gallaeciensis BS107] Length = 337 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 194/324 (59%), Positives = 251/324 (77%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + ++ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KSVKKPNVSADELLEYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +GD+ +T+YR+HGH+LACG+D S +MAELTGR+GG SKGKGGSMHMFS + FYGGHGI Sbjct: 65 EDGDKRVTSYRDHGHMLACGMDPSGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV LG G+AF++KY+ +D++ FGDGAANQGQVYE++N+A LW+L V++VIENNQ Sbjct: 125 VGAQVPLGAGLAFSDKYKGNDRVTFAYFGDGAANQGQVYETYNMAQLWDLPVVFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTSV R++ KRG ++ I G +VDGMD+ AVK ++AVA+CRA KGP I+E+ Sbjct: 185 YAMGTSVQRSTKSPALWKRGEAYGIKGEEVDGMDVLAVKEAGERAVAHCRAGKGPYILEV 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR DPIEQVR LL K A+E DLK I+ ++ I Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMREERDPIEQVRDMLLTGKHATEDDLKAIDKEIKDI 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N S +F++ EP EL++DI Sbjct: 305 VNKSADFSKESPEPALEELWTDIY 328 >gi|329113475|ref|ZP_08242256.1| Pyruvate dehydrogenase E1 component subunit alpha [Acetobacter pomorum DM001] gi|326697300|gb|EGE48960.1| Pyruvate dehydrogenase E1 component subunit alpha [Acetobacter pomorum DM001] Length = 336 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 198/318 (62%), Positives = 246/318 (77%), Gaps = 1/318 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++Q L AY MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++MSL EGD+ Sbjct: 16 PSLTRDQFLKAYYDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGIQMSLHEGDK 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +IT+YR+HG +L G+ +MAELTGR G S GKGGSMHMFS + FYGGHGIVGAQV Sbjct: 76 LITSYRDHGQMLVAGMTPRGVMAELTGRSTGYSHGKGGSMHMFSREKNFYGGHGIVGAQV 135 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 SLG G+AFANKYR +D++ V FGDGAANQGQVYESFN+AAL L I+VIENN+Y MGT Sbjct: 136 SLGIGLAFANKYRNTDEVSVAYFGDGAANQGQVYESFNLAALLKLPCIFVIENNRYGMGT 195 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +V RASA K G + IPG +VDGMD+ AV A ++AV +CR KGP ++EM+TYRY Sbjct: 196 AVERASASHELYKNGEPWGIPGKRVDGMDVAAVYAAAEEAVKHCREGKGPYLLEMMTYRY 255 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTR+E++E+R DPIE V+ LL + +E +LK +E ++ I+N+S Sbjct: 256 RGHSMSDPAKYRTRDEVDEVRKTRDPIEHVKHILLDSGV-TEAELKTMETEIKSIVNDSA 314 Query: 345 EFAQSDKEPDPAELYSDI 362 EFAQ+ EPDPAELY+D+ Sbjct: 315 EFAQTSPEPDPAELYTDV 332 >gi|163742727|ref|ZP_02150112.1| Pyruvate dehydrogenase (lipoamide) [Phaeobacter gallaeciensis 2.10] gi|161383982|gb|EDQ08366.1| Pyruvate dehydrogenase (lipoamide) [Phaeobacter gallaeciensis 2.10] Length = 337 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 193/324 (59%), Positives = 251/324 (77%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + ++ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KSVKKPNVSADELLEYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 +GD+ +T+YR+HGH+LACG+D + +MAELTGR+GG SKGKGGSMHMFS + FYGGHGI Sbjct: 65 EDGDKRVTSYRDHGHMLACGMDPNGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV LG G+AF++KY+ +D++ FGDGAANQGQVYE++N+A LW+L V++VIENNQ Sbjct: 125 VGAQVPLGAGLAFSDKYKGNDRVTFAYFGDGAANQGQVYETYNMAQLWDLPVVFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTSV R++ KRG ++ I G +VDGMD+ AVK ++AVA+CRA KGP I+E+ Sbjct: 185 YAMGTSVQRSTKSPALWKRGEAYGIKGEEVDGMDVLAVKEAGERAVAHCRAGKGPYILEV 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR DPIEQVR LL K A+E DLK I+ ++ I Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMREERDPIEQVRDMLLTGKHATEDDLKAIDKEIKDI 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N S +F++ EP EL++DI Sbjct: 305 VNKSADFSKESPEPALEELWTDIY 328 >gi|254464562|ref|ZP_05077973.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacterales bacterium Y4I] gi|206685470|gb|EDZ45952.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacterales bacterium Y4I] Length = 337 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 192/324 (59%), Positives = 247/324 (76%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + E+ YR MLLIRRFEEK+GQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KTTKKPNVSAEELTHYYREMLLIRRFEEKSGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ IT+YR+HGH+LACG+D +MAELTGR+GG SKGKGGSMHMFS + FYGGHGI Sbjct: 65 EEGDKRITSYRDHGHMLACGMDPDGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV +G G+AFA+KY+ + ++ FGDGAANQGQVYE+FN+AALW L VI+VIENNQ Sbjct: 125 VGAQVPIGAGLAFADKYKGNGRVTFTYFGDGAANQGQVYETFNMAALWKLPVIFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTS R+++ +RG +F IPG VDGM++ +VK ++AVA+CR+ GP I+E+ Sbjct: 185 YAMGTSQQRSTSSAEIWERGKAFGIPGEAVDGMNVLSVKEAGERAVAHCRSGDGPYILEV 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR DPIEQVR LL K A+E DLK I+ ++ I Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMREERDPIEQVRDMLLTGKHATEEDLKAIDKEIKDI 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 ++ S +FA+ EP EL++DI Sbjct: 305 VSKSADFAKESPEPALDELWTDIY 328 >gi|27379894|ref|NP_771423.1| pyruvate dehydrogenase subunit alpha [Bradyrhizobium japonicum USDA 110] gi|27353047|dbj|BAC50048.1| pyruvate dehydrogenase alpha subunit [Bradyrhizobium japonicum USDA 110] Length = 340 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 232/323 (71%), Positives = 268/323 (82%), Gaps = 1/323 (0%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G EF +EQEL A R MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+L Sbjct: 18 GGSPPEFTREQELKALRDMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAVVVGMQMALK 77 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 EGDQ+IT YR+HGH+LA G+DA+ +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIV Sbjct: 78 EGDQVITGYRDHGHMLATGMDANGVMAELTGRRGGYSKGKGGSMHMFSKEKHFYGGHGIV 137 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN YR + + V FGDGAANQGQVYESFN+A LW L VIYVIENN+Y Sbjct: 138 GAQVSLGTGLAFANNYRGNGNVSVTYFGDGAANQGQVYESFNMAELWKLPVIYVIENNRY 197 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGT+VSRASAQ +FSKRG SFNIPG+QVDGMD+RAVKA D+A A+CRA KGP+I+EM Sbjct: 198 AMGTAVSRASAQQDFSKRGASFNIPGLQVDGMDVRAVKAAGDEAAAWCRAGKGPMILEMQ 257 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YRTREE+ ++R + DPIEQVR RLL K SE DLK I+ VR I+ Sbjct: 258 TYRYRGHSMSDPAKYRTREEVEKVRHDQDPIEQVRNRLLTAKV-SEADLKAIDAEVRDIV 316 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 N S +FAQ D EPD AEL++D+ Sbjct: 317 NASADFAQHDPEPDAAELWTDVY 339 >gi|260576743|ref|ZP_05844728.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhodobacter sp. SW2] gi|259020995|gb|EEW24306.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhodobacter sp. SW2] Length = 329 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 198/324 (61%), Positives = 250/324 (77%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + E S +K++ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KTPEKSNVSKDELLHFYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 GD+ +T+YR+HGH+LACG+DA +MAELTGR GG S+GKGGSMHMFS + FYGGHGI Sbjct: 65 KPGDKRLTSYRDHGHMLACGMDAKGVMAELTGRAGGYSRGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV LG G+AFA+KY +D + FGDGAANQGQVYE++N+A LWNL VI+VIENNQ Sbjct: 125 VGAQVPLGAGLAFADKYLGNDNVTFAYFGDGAANQGQVYETYNMAQLWNLPVIFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTS+ R++ + +RG ++ I G VDGMD+ AVKA +KAVA CRA +GP I+EM Sbjct: 185 YAMGTSMKRSTRGPSLWERGAAYGIKGEPVDGMDVLAVKAAAEKAVAVCRAGEGPYILEM 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +TYRYRGHSMSDPA YRTREE+ +M+ D IE VR LL AS+ DLK I+ +++ I Sbjct: 245 MTYRYRGHSMSDPAKYRTREEVQKMKDEKDAIEHVRDLLLGAGLASDEDLKAIDRDIKAI 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N + EFA+ EPD AEL++DI Sbjct: 305 VNEAAEFAKESPEPDVAELWTDIY 328 >gi|113473791|ref|YP_718054.1| pyruvate dehydrogenase (lipoamide) [Sphingomonas sp. KA1] gi|112821471|dbj|BAF03342.1| pyruvate dehydrogenase (lipoamide) [Sphingomonas sp. KA1] Length = 357 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 184/318 (57%), Positives = 245/318 (77%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMI 106 + E+ L Y MLLIRRFEE+AGQLYG+G++GGFCHL IGQEAV VG++ +LT G D +I Sbjct: 38 SDEELLKFYEQMLLIRRFEERAGQLYGLGLIGGFCHLYIGQEAVAVGLQSALTPGKDSVI 97 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HGH+LA G+D IMAELTGR GIS+GKGGSMHMFS + FYGGHGIVGAQV L Sbjct: 98 TGYRDHGHMLAYGIDPKVIMAELTGRAAGISRGKGGSMHMFSVDHKFYGGHGIVGAQVPL 157 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AF++KY +C+ FGDGAANQGQVYE+FN+AALW+L +++V+ENN YAMGT+V Sbjct: 158 GAGLAFSHKYNEDGGVCMAYFGDGAANQGQVYEAFNMAALWSLPIVFVVENNGYAMGTAV 217 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R SA+T+F +RG +F IPGM V+GMD+ V+A + A+A+ R+ GP+++E+ TYRYRG Sbjct: 218 KRGSAETDFYRRGTAFRIPGMNVNGMDVLEVRAAAEVALAHVRSGAGPVLMELHTYRYRG 277 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR+REE+ +MR NHDPIE + L+ SE +K+I+ +R + + +F Sbjct: 278 HSMSDPAKYRSREEVQDMRENHDPIEAAKAELVKRGV-SEERMKDIDKQIRSKVAEAADF 336 Query: 347 AQSDKEPDPAELYSDILI 364 A++ EP+ ELY+D+L+ Sbjct: 337 AENSPEPELPELYTDVLV 354 >gi|84503369|ref|ZP_01001438.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Oceanicola batsensis HTCC2597] gi|84388279|gb|EAQ01230.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Oceanicola batsensis HTCC2597] Length = 349 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 200/319 (62%), Positives = 246/319 (77%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + + S YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ Sbjct: 12 PNVSADALKSYYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDK 71 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 IT YR+HGH+LACG++ +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGA V Sbjct: 72 RITTYRDHGHMLACGMNPDGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVGANV 131 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AFA+KY +D++ FGDGAANQGQVYE+FN+AALW+L VI+VIENNQYAMGT Sbjct: 132 PLGAGLAFADKYLGNDRVTFTYFGDGAANQGQVYETFNMAALWHLPVIFVIENNQYAMGT 191 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + R+++ + RG +F IPG VDGMD+ AVKA DKAVA+CR+ KGP I+E+ TYRY Sbjct: 192 AQKRSTSTPDLYTRGEAFGIPGEVVDGMDVLAVKAAGDKAVAHCRSGKGPYILEIKTYRY 251 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE+ +MR D IE+VR+ LL ASE DLK I+ +++I+N S Sbjct: 252 RGHSMSDPAKYRTREEVQKMREEKDAIERVRQMLLDEDHASEDDLKAIDKEIKEIVNQSA 311 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFA+ EP ELYSDI Sbjct: 312 EFAKESPEPAVEELYSDIY 330 >gi|170747420|ref|YP_001753680.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium radiotolerans JCM 2831] gi|170653942|gb|ACB22997.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium radiotolerans JCM 2831] Length = 361 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 215/361 (59%), Positives = 273/361 (75%), Gaps = 14/361 (3%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIR 63 D + ++ A + A R A + +F ++++L AY MLLIR Sbjct: 11 PATDASSAPVQAASPQAAEAHRPA--------------PNMPQFTRDEDLHAYHEMLLIR 56 Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 RFEEKAGQLYGMG++GGFCHL IGQEAV++GM+M+ EGDQ+IT YR+HGH+LACG+D Sbjct: 57 RFEEKAGQLYGMGLIGGFCHLYIGQEAVVIGMQMASVEGDQVITGYRDHGHMLACGMDPK 116 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 +MAELTGR+GG S+GKGGSMHMFS + F+GGHGIVGAQVSLGTG+AFA+ YR + K+ Sbjct: 117 GVMAELTGRRGGYSRGKGGSMHMFSREKQFFGGHGIVGAQVSLGTGLAFADHYRENGKVS 176 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + GDGAANQGQVYESFN+AALW L V+YVIENN+YAMGTSV+RASAQT+FSKRG+SF Sbjct: 177 LTYMGDGAANQGQVYESFNMAALWKLPVVYVIENNRYAMGTSVARASAQTDFSKRGLSFG 236 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINE 303 IPG QVDGMD+R V+ +A+ + R +GP I+EM TYRYRGHSMSDPA YRT++E+++ Sbjct: 237 IPGEQVDGMDVRTVREAATRAIEHARTGQGPYILEMQTYRYRGHSMSDPAKYRTKDEVSK 296 Query: 304 MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 MR HDPIE VRKRLL E +LK + VR+++N S EFA +D EPDP+EL++DIL Sbjct: 297 MRDEHDPIEMVRKRLLELHAVPEAELKATDAKVREVVNASAEFATNDPEPDPSELWTDIL 356 Query: 364 I 364 + Sbjct: 357 L 357 >gi|159044701|ref|YP_001533495.1| pyruvate dehydrogenase E1 component subunit alpha [Dinoroseobacter shibae DFL 12] gi|157912461|gb|ABV93894.1| pyruvate dehydrogenase E1 component subunit alpha [Dinoroseobacter shibae DFL 12] Length = 331 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 192/321 (59%), Positives = 252/321 (78%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + +KE +S YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + +G Sbjct: 8 KKPNVSKEDLMSYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEDG 67 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+ +T+YR+HGH+LACG+D +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGA Sbjct: 68 DKRVTSYRDHGHMLACGMDPKGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVGA 127 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV +G G+AF++KYR +D++ FGDGAANQGQVYE++N+A LW L V++VIENNQYAM Sbjct: 128 QVPIGAGLAFSDKYRGNDRVTFAYFGDGAANQGQVYETYNMAELWMLPVVFVIENNQYAM 187 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV+R++ + +RG ++ IPG +VDGMD+ AVKA +KAVA+CRA KGP I+E+ TY Sbjct: 188 GTSVARSTKSPSLWERGAAYGIPGEEVDGMDVLAVKAAGEKAVAHCRAGKGPYILEVKTY 247 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDPA YRTREE+ ++R D IE VR+ LL ASE +LK I+ ++ ++N Sbjct: 248 RYRGHSMSDPAKYRTREEVQKVREQRDAIEHVREMLLSGNHASEDELKAIDKEIKAVVNE 307 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 + EF++ EP +EL++DI Sbjct: 308 AAEFSRESPEPALSELWTDIY 328 >gi|126325609|ref|XP_001368538.1| PREDICTED: similar to pyruvate dehydrogenase (lipoamide) (EC 1.2.4.1) alpha chain precursor - dunnart (Sminthopsis macroura) (fragment) [Monodelphis domestica] Length = 1049 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 172/344 (50%), Positives = 230/344 (66%), Gaps = 7/344 (2%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSE--FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 A+ + DI LE + +E+ L Y++M +RR E KA QLY ++ G Sbjct: 689 FANDASFDIKKCDIHRLEEGPPTTTILTREEGLKYYKIMQTVRRMELKADQLYKQKIIRG 748 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGK Sbjct: 749 FCHLYDGQEACCVGLEAGINPSDHVITAYRAHGFTYTRGLTVREILAELTGRRGGCAKGK 808 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+ FYGG+GIVGAQV LG GIA A KY D+IC+ +GDGAANQGQ++E+ Sbjct: 809 GGSMHMY--AKNFYGGNGIVGAQVPLGAGIALACKYNGKDEICLTLYGDGAANQGQIFET 866 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG IPG++VDGMD+ V+ Sbjct: 867 YNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDY--IPGIRVDGMDVLCVREA 924 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 A AYCR+ KGP+++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++ Sbjct: 925 TKFAAAYCRSGKGPMVMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMV 984 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +N AS +LKEI++ VRK I ++ +FA +D EP EL I Sbjct: 985 NNNLASIEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIY 1028 >gi|296447123|ref|ZP_06889055.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylosinus trichosporium OB3b] gi|296255392|gb|EFH02487.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylosinus trichosporium OB3b] Length = 346 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 206/319 (64%), Positives = 258/319 (80%), Gaps = 1/319 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V +F++EQEL+AYR MLLIRRFEEKAGQ+YGMG++GGFCHL IGQEAV+VG +M+ D Sbjct: 27 VLQFSREQELAAYRAMLLIRRFEEKAGQIYGMGLIGGFCHLYIGQEAVVVGARMAARPTD 86 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q IT YR+HGH+LACG++ ++MAELTGR+ G SKGKGGSMHMFS + FYGGHGIVGA Sbjct: 87 QFITGYRDHGHMLACGMEPKRVMAELTGRRSGYSKGKGGSMHMFSREKNFYGGHGIVGAP 146 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 LG G+AFA+ YR +D + FG+GAANQGQVYESFN+A LW L V+Y++ENN+YAMG Sbjct: 147 APLGAGLAFADLYRGTDSASLTFFGEGAANQGQVYESFNMAELWKLPVVYIVENNRYAMG 206 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV RASAQ NFSKRG +FNI G QVDGMD+RAV A + +A+ +CRA KGP +IE TYR Sbjct: 207 TSVERASAQPNFSKRGEAFNIIGRQVDGMDVRAVAAVVTEALDWCRAGKGPYLIEAKTYR 266 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR++EE+ ++R DPIEQVR RLL ASE +LK+I+ VRKI++ + Sbjct: 267 YRGHSMSDPAKYRSKEEVQKVREEQDPIEQVRARLLALG-ASEDELKQIDAAVRKIVSYA 325 Query: 344 VEFAQSDKEPDPAELYSDI 362 +FA +D EPDP+EL++D+ Sbjct: 326 SDFATNDAEPDPSELWTDV 344 >gi|326387729|ref|ZP_08209335.1| pyruvate dehydrogenase (lipoamide) [Novosphingobium nitrogenifigens DSM 19370] gi|326207775|gb|EGD58586.1| pyruvate dehydrogenase (lipoamide) [Novosphingobium nitrogenifigens DSM 19370] Length = 379 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 192/377 (50%), Positives = 257/377 (68%), Gaps = 14/377 (3%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGF------------EVSEFN 48 M + K A P + A D + F + E + Sbjct: 1 MAKPARPRAPRTTKSATAPVSTKAAPAIQPSDAIAGEDEAVFALRSLQQAHANNKRYEAS 60 Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMIT 107 E+ L Y M+LIRRFEE+AGQLYG+G++GGFCHL IGQEAV VG++ +L G D +IT Sbjct: 61 DEELLHFYEQMVLIRRFEERAGQLYGLGLIGGFCHLYIGQEAVAVGVQSALQSGHDSVIT 120 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+HGH+LA G+D IMAELTGR GIS+GKGGSMHMFST++ FYGGHGIVGAQV LG Sbjct: 121 GYRDHGHMLAYGIDPRIIMAELTGRGAGISRGKGGSMHMFSTEHKFYGGHGIVGAQVPLG 180 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 G+AFA+KYR +C+ FGDGA+NQGQVYE+FN+AALW L +++V+ENN YAMGT+V Sbjct: 181 AGLAFAHKYRNDGGVCIAYFGDGASNQGQVYETFNMAALWKLPIVFVVENNGYAMGTAVK 240 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R SA+T+F +RG +F IPGM V+GMD+ V+ + A+ + RA GP+++E+ TYRYRGH Sbjct: 241 RGSAETHFYRRGTAFRIPGMDVNGMDVLEVRQATEVALEFVRAGNGPVLMELNTYRYRGH 300 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR+REE+ EMR HDPIE ++ LL E +K+I+ +R+++ + +FA Sbjct: 301 SMSDPAKYRSREEVQEMRDKHDPIEAAKQELLKRG-IDEVRIKDIDKKIRQVVAEAADFA 359 Query: 348 QSDKEPDPAELYSDILI 364 ++ EPD ELY+D+L+ Sbjct: 360 ENSPEPDMPELYTDVLV 376 >gi|310815650|ref|YP_003963614.1| pyruvate dehydrogenase (lipoamide) [Ketogulonicigenium vulgare Y25] gi|308754385|gb|ADO42314.1| pyruvate dehydrogenase (lipoamide) [Ketogulonicigenium vulgare Y25] Length = 340 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 191/319 (59%), Positives = 249/319 (78%), Gaps = 5/319 (1%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAV-----IVGMKMSLTEGDQ 104 E L YR M+LIRRFEEKAGQLYGMG++GGFCHL IGQEAV +VG++ + +EGD+ Sbjct: 21 EDLLKYYREMMLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVGQEAVVVGLEAAASEGDK 80 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +T+YR+HGH+LACG+DA +MAELTGR+GG S+GKGGSMHMFS FYGGHGIVGAQV Sbjct: 81 RVTSYRDHGHMLACGMDAKGVMAELTGREGGYSRGKGGSMHMFSKDRHFYGGHGIVGAQV 140 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +G G+AFA+KY +D++ FGDGAANQGQVYE++N+A LW+L VI+VIENNQYAMGT Sbjct: 141 PIGAGLAFADKYLGNDRVTFAYFGDGAANQGQVYETYNMAQLWDLPVIFVIENNQYAMGT 200 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R++ + KRG ++ I G +VDGMD+ AV+ ++AVA+CRA KGP I+E+ TYRY Sbjct: 201 SVQRSTKSPSLWKRGEAYGIKGEEVDGMDVLAVRDAGERAVAHCRAGKGPYILEVKTYRY 260 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR+R+E+ +M+ DPIEQVR+ LL A+E +LK+I+ +++ I+N S Sbjct: 261 RGHSMSDPAKYRSRDEVQKMKDERDPIEQVRQILLTGNHATEDELKKIDADIKAIVNESA 320 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFA+ EP EL++DI Sbjct: 321 EFAKDSPEPALDELWTDIY 339 >gi|325105825|ref|YP_004275479.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Pedobacter saltans DSM 12145] gi|324974673|gb|ADY53657.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Pedobacter saltans DSM 12145] Length = 331 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 159/318 (50%), Positives = 212/318 (66%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KE L Y LML +RRFEEK GQLYG + GFCHL IGQEAVI G + +GD +I Sbjct: 6 ITKETYLYWYELMLFLRRFEEKTGQLYGQQKIRGFCHLYIGQEAVIAGTMSATKKGDSLI 65 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+H H LA G+ A MAE+ G+ G SKGKGGSMH F +N FYGGHGIVG Q+ L Sbjct: 66 TTYRDHAHALAKGMSAKAAMAEMYGKATGCSKGKGGSMHFFDKENNFYGGHGIVGGQIPL 125 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIAFA KY +D + + GDGA QG + E+FN+A W L V++++ENN YAMGTSV Sbjct: 126 GAGIAFAEKYLGTDNVNLCYMGDGAVRQGALNETFNMAMNWKLPVVFIVENNGYAMGTSV 185 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +R + + K G+ + +P M VDGMD AV +D+AV R +GP +E+ TYRY+G Sbjct: 186 ARTANTQDIYKLGLGYEMPSMPVDGMDPVAVHNAIDEAVQRARRDEGPTFLEIRTYRYKG 245 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDP YRT+EE+ E ++ DPIE V++++L KWA + E+ ++ I+ +V+F Sbjct: 246 HSMSDPQKYRTKEEVEEYKAK-DPIEVVKEKILQEKWADQAWFDEVAAKIKAEIDEAVKF 304 Query: 347 AQSDKEPDPAELYSDILI 364 A+ PDP+ELY+D+ + Sbjct: 305 AEESPWPDPSELYTDVYV 322 >gi|126735932|ref|ZP_01751676.1| Pyruvate dehydrogenase (lipoamide) [Roseobacter sp. CCS2] gi|126714489|gb|EBA11356.1| Pyruvate dehydrogenase (lipoamide) [Roseobacter sp. CCS2] Length = 336 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 194/328 (59%), Positives = 251/328 (76%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 +P + + E+ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG+ Sbjct: 1 MPPKKAAAKPNVSAEELLGHYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGL 60 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 + + EGD+ +T+YR+HGH+LACG+D IMAELTGR+GG SKGKGGSMHMFS + FYG Sbjct: 61 EAAADEGDKRVTSYRDHGHMLACGMDPKGIMAELTGREGGFSKGKGGSMHMFSKEKHFYG 120 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 GHGIV AQV LG G+AF++KY+ +D++ FGDGAANQGQVYE++N+A LW+L V++VI Sbjct: 121 GHGIVAAQVPLGAGLAFSDKYKGNDRVTFTYFGDGAANQGQVYETYNMAELWDLPVVFVI 180 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENNQYAMGTSV R++ + +RG ++ IPG +VDGM + AVK ++AVA+CRA KGP Sbjct: 181 ENNQYAMGTSVQRSTKSPSLWERGAAYGIPGEEVDGMSVLAVKEAGERAVAHCRAGKGPY 240 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 I+E+ TYRYRGHSMSDPA YRTREE+ +MR DPIEQ+R LL K AS+ DLK I+ Sbjct: 241 ILEVKTYRYRGHSMSDPAKYRTREEVQKMRDERDPIEQIRDMLLTGKHASDDDLKAIDKE 300 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++ I+N + EF++ EP EL++DI Sbjct: 301 IKAIVNEAAEFSKESPEPALEELWTDIY 328 >gi|77748187|gb|AAI06671.1| Pdha1-B-prov protein [Xenopus laevis] Length = 395 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 173/363 (47%), Positives = 238/363 (65%), Gaps = 7/363 (1%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSE--FNKEQELSAYRLMLL 61 A++ VT + +A AT + DI LE ++ +E+ L YR M Sbjct: 16 AQKPVTAVRVMVASRNYADFASEATFDIKKCDIHRLEEEPPTQAVLTREEGLQYYRTMQT 75 Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 IRR E K+ QLY ++ GFCHL GQEA VG++ + D +ITAYR HG+ GV Sbjct: 76 IRRMELKSDQLYKQKIIRGFCHLYDGQEACCVGLESGINPTDHLITAYRAHGYTYTRGVS 135 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG G+A A K+ ++ Sbjct: 136 VKEILAELTGRRGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGVALACKFFGKNE 193 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 IC+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG Sbjct: 194 ICLSLYGDGAANQGQIFETYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDY 253 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREE 300 IPG++VDGMD+ V+ A +CR+ KGPI++E+ TYRY GHSMSDP +YRTREE Sbjct: 254 --IPGLRVDGMDVLCVREATKFAADHCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREE 311 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 I E+RS DPI ++ R+L+N ++ +LKEI++ VRK I + +FA +D EP E+ + Sbjct: 312 IQEVRSKSDPITLLKDRMLNNNLSNVEELKEIDVEVRKEIEEAAQFATTDPEPPLEEIAN 371 Query: 361 DIL 363 I Sbjct: 372 HIY 374 >gi|149277282|ref|ZP_01883424.1| pyruvate dehydrogenase E1 component alpha subunit [Pedobacter sp. BAL39] gi|149232159|gb|EDM37536.1| pyruvate dehydrogenase E1 component alpha subunit [Pedobacter sp. BAL39] Length = 331 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 170/319 (53%), Positives = 222/319 (69%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E NK+ L + MLL+R+FEEK GQLYG + GFCHL IGQEAV+ G +L D M Sbjct: 5 EINKDTYLKWFESMLLMRKFEEKTGQLYGQQKIRGFCHLYIGQEAVVAGAISALQPEDSM 64 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H H LA GV A+ IMAE+ G+ G SKGKGGSMHMFS ++ FYGGHGIVG Q+ Sbjct: 65 ITAYRDHAHALAKGVSANSIMAEMYGKATGCSKGKGGSMHMFSKEHNFYGGHGIVGGQIP 124 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY+ + + V GDGA QG + E+FN+A LW L VI+V ENN YAMGTS Sbjct: 125 LGAGIAFAEKYKGTKNVNVCYMGDGAVRQGALNEAFNMAMLWKLPVIFVCENNGYAMGTS 184 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R + T+ K G+ F++P VDGMD AV MD+A R +GP +EM TYRYR Sbjct: 185 VERTTNMTDIYKIGLGFDMPCAPVDGMDPVAVHNAMDEAAQRARNGEGPTFLEMRTYRYR 244 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YRT++E+ ++ DPIEQVR+ +L K+A + ++EIE V++I+++SV+ Sbjct: 245 GHSMSDPAKYRTKDELESYKTK-DPIEQVRETILTEKYADQAWIEEIEAKVKQIVDDSVK 303 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ P+ +ELY+D+ + Sbjct: 304 FAEESPWPEASELYTDVYV 322 >gi|222474803|ref|YP_002563218.1| pyruvate dehydrogenase E1 component, alpha subunit precursor (pdhA) [Anaplasma marginale str. Florida] gi|222418939|gb|ACM48962.1| pyruvate dehydrogenase E1 component, alpha subunit precursor (pdhA) [Anaplasma marginale str. Florida] Length = 372 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 175/317 (55%), Positives = 231/317 (72%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + EQ + +Y MLL+RRFEEK GQLYGMG++ GFCHL IGQEA+ VG++ L+ D ++ Sbjct: 55 ISDEQVVKSYHDMLLMRRFEEKVGQLYGMGLIRGFCHLYIGQEAIAVGLQNVLSSEDSIV 114 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YREHG +L G A+ I+AEL G++ G SKGKGGSMHMF+ F+GGHGIVGAQV + Sbjct: 115 TSYREHGFMLTSGESANTILAELMGKRTGCSKGKGGSMHMFNVAKNFFGGHGIVGAQVPI 174 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTGIAFA +Y++ + C GDGA NQGQVYESFN+A+LW L V+YV+ENN+YAMGTSV Sbjct: 175 GTGIAFAEQYKKGRGVVFTCLGDGAMNQGQVYESFNMASLWKLPVVYVVENNEYAMGTSV 234 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+S+ +RG +PG QVDGMDI AV A CR GP+++EM TYR+RG Sbjct: 235 PRSSSVVELYRRGEGCGVPGSQVDGMDIFAVIEAASNAAELCRNGNGPVLLEMKTYRFRG 294 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTR+E++E+R + DP+ ++++ +L +K A E L E VR+I+N +VEF Sbjct: 295 HSMSDPAKYRTRQEVDEVRDSRDPLCRLKEYVLKHKIAPESTLDGFEKQVREIVNGAVEF 354 Query: 347 AQSDKEPDPAELYSDIL 363 AQS EP+ ELY+D+ Sbjct: 355 AQSSPEPEAGELYTDVY 371 >gi|220926285|ref|YP_002501587.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Methylobacterium nodulans ORS 2060] gi|219950892|gb|ACL61284.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium nodulans ORS 2060] Length = 346 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 211/319 (66%), Positives = 261/319 (81%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +F ++++L AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV++G++M+ +GDQ+ Sbjct: 23 QFTRDEDLHAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVIGVQMASKDGDQV 82 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT YR+HGH+LACG+D +MAELTGR+GG S+GKGGSMHMFS + FYGGHGIVGAQVS Sbjct: 83 ITGYRDHGHMLACGMDPKGVMAELTGRRGGYSRGKGGSMHMFSREKNFYGGHGIVGAQVS 142 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTGI FANKYR + + GDGAANQGQVYESFN+A LW L V+YVIENN+YAMGTS Sbjct: 143 LGTGIGFANKYRGDGAVSLTYMGDGAANQGQVYESFNMAQLWKLPVVYVIENNRYAMGTS 202 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V+RASAQT+FSKRGVSF IPG QVDGMD+RAV+ +A+ + R+ +GP I+EM TYRYR Sbjct: 203 VTRASAQTDFSKRGVSFGIPGEQVDGMDVRAVRQAAARAIEHARSGEGPYILEMQTYRYR 262 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YRT++E+ MR DPIEQVRKRLL + +K I+ VR+I+N + E Sbjct: 263 GHSMSDPAKYRTKDEVARMREESDPIEQVRKRLLGPHKTPDDQIKAIDAKVREIVNQAAE 322 Query: 346 FAQSDKEPDPAELYSDILI 364 FA +D EPDPAEL++D+L+ Sbjct: 323 FATNDPEPDPAELWTDVLL 341 >gi|89069560|ref|ZP_01156904.1| Pyruvate dehydrogenase E1 component, alpha subunit [Oceanicola granulosus HTCC2516] gi|89044895|gb|EAR50985.1| Pyruvate dehydrogenase E1 component, alpha subunit [Oceanicola granulosus HTCC2516] Length = 338 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 192/319 (60%), Positives = 243/319 (76%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + E+ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ Sbjct: 10 PNVSAEELLHYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAADEGDK 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +T+YR+HGH+LACG+D +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIV AQV Sbjct: 70 RVTSYRDHGHMLACGMDPKGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVAAQV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +G G+A A+KY +D++ FGDGAANQGQVYE++N+A LW+L V++VIENNQYAMGT Sbjct: 130 PIGAGLALADKYLGNDRVTFTYFGDGAANQGQVYETYNMAQLWDLPVVFVIENNQYAMGT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R++ + +RG ++ I G +VDGMD+ AVKA +KAV +CRA GP I+E+ TYRY Sbjct: 190 SVKRSTKSPSLWERGAAYGIKGEEVDGMDVLAVKAAGEKAVEHCRAGDGPYILEVKTYRY 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE+ +MR DPIE VR LL K ASE DLK I+ V+ +N + Sbjct: 250 RGHSMSDPAKYRTREEVQKMRDERDPIESVRTMLLDGKHASEDDLKSIDKEVKDQVNEAA 309 Query: 345 EFAQSDKEPDPAELYSDIL 363 EF++ EP EL++DI Sbjct: 310 EFSKESPEPAMEELWTDIY 328 >gi|84517287|ref|ZP_01004641.1| Pyruvate dehydrogenase E1 component, alpha subunit [Loktanella vestfoldensis SKA53] gi|84508767|gb|EAQ05230.1| Pyruvate dehydrogenase E1 component, alpha subunit [Loktanella vestfoldensis SKA53] Length = 338 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 193/328 (58%), Positives = 253/328 (77%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 +P + S + E+ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG+ Sbjct: 3 MPPKQAAAKSNVSAEELLGHYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGL 62 Query: 96 KMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYG 155 + + EGD+ +T+YR+HGH+LACG+D IMAELTGR+GG SKGKGGSMHMFS + FYG Sbjct: 63 EAAAGEGDKRVTSYRDHGHMLACGMDPKGIMAELTGREGGFSKGKGGSMHMFSKEKHFYG 122 Query: 156 GHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 GHGIVGAQV LG G+AF++KY+ +D++ FGDGAANQGQVYE++N+A LW+L VI+VI Sbjct: 123 GHGIVGAQVPLGAGLAFSDKYKGNDRVTFAYFGDGAANQGQVYETYNMAQLWDLPVIFVI 182 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENN YAMGTSV R++ + +RG ++ I G +VDGM++ AVK ++AVA+CR+ KGP Sbjct: 183 ENNGYAMGTSVVRSTKSPSLWERGAAYGIKGEEVDGMNVLAVKEAGERAVAHCRSGKGPY 242 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 I+E+ TYRYRGHSMSDPA YRTR+E+ +MR DPIEQVR LL K A++ DLK I+ Sbjct: 243 ILEVKTYRYRGHSMSDPAKYRTRDEVQKMRDERDPIEQVRDMLLTGKHATDDDLKAIDKE 302 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++ I+N++ EF++ EP EL++DI Sbjct: 303 IKAIVNDAAEFSKESPEPHLDELWTDIY 330 >gi|126728751|ref|ZP_01744566.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Sagittula stellata E-37] gi|126710681|gb|EBA09732.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Sagittula stellata E-37] Length = 340 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 192/319 (60%), Positives = 246/319 (77%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + ++ S YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ Sbjct: 10 PNVSADELKSWYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAADEGDK 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 IT+YR+HGH+LACG+D +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV Sbjct: 70 RITSYRDHGHMLACGMDPKGVMAELTGREGGYSKGKGGSMHMFSREKHFYGGHGIVGAQV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AF++KYR +D++ FGDGAANQGQVYE+FN+AALW L VI+VIENNQYAMGT Sbjct: 130 PLGAGLAFSDKYRGNDRVTFTYFGDGAANQGQVYETFNMAALWKLPVIFVIENNQYAMGT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + +R+++ + RG +F IPG VDGMD+ AV+ KAV +CR+ KGP I+E+ TYRY Sbjct: 190 AQARSTSTPDLHTRGEAFGIPGEIVDGMDVTAVRDAGAKAVKHCRSGKGPYILEVKTYRY 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE+ +MR DPIE VR+ LL K A+E DLK I+ ++ ++ + Sbjct: 250 RGHSMSDPAKYRTREEVQKMREERDPIEHVREMLLQGKHATEEDLKAIDKEIKAVVTEAA 309 Query: 345 EFAQSDKEPDPAELYSDIL 363 +F++ EP EL++DI Sbjct: 310 DFSRESPEPALDELWTDIY 328 >gi|197105207|ref|YP_002130584.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Phenylobacterium zucineum HLK1] gi|196478627|gb|ACG78155.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Phenylobacterium zucineum HLK1] Length = 348 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 203/316 (64%), Positives = 250/316 (79%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +K++ L YR MLLIRRFEE+AGQLYGMG++GGFCHL IGQEA+ VG++ GDQ+IT Sbjct: 24 DKDELLKFYRDMLLIRRFEERAGQLYGMGLIGGFCHLYIGQEAIAVGVQAIKQPGDQVIT 83 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 YR+HGH+LACG+D ++MAELTGR GG SKGKGGSMHMFST+ FYGGHGIVGAQVSLG Sbjct: 84 GYRDHGHMLACGMDPREVMAELTGRAGGSSKGKGGSMHMFSTEADFYGGHGIVGAQVSLG 143 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+A ANKYR + K+ FGDGAANQGQVYESFN+A LW+L V+YVIENNQYAMGT+V Sbjct: 144 TGLALANKYRDNGKVSFTYFGDGAANQGQVYESFNMAELWSLPVVYVIENNQYAMGTAVE 203 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R+S++T +RG SF IPG QVDGMD+ AVKA KA + R+ GP I+EM TYRYRGH Sbjct: 204 RSSSETELFRRGASFKIPGEQVDGMDVLAVKAAAAKAAEHARSGNGPYILEMKTYRYRGH 263 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YRTREE++E+R DPI+ V + L + WA E LK I+ V+KI+ ++ EFA Sbjct: 264 SMSDPAKYRTREEVDEVRKTRDPIDHVEELLEKHGWADEASLKAIDAEVKKIVADAAEFA 323 Query: 348 QSDKEPDPAELYSDIL 363 ++ EPDP+ELY+D+ Sbjct: 324 RTSPEPDPSELYTDVY 339 >gi|56416433|ref|YP_153507.1| pyruvate dehydrogenase E1 component, alpha subunit precursor [Anaplasma marginale str. St. Maries] gi|254994666|ref|ZP_05276856.1| pyruvate dehydrogenase E1 component, alpha subunit precursor [Anaplasma marginale str. Mississippi] gi|269959151|ref|YP_003328940.1| pyruvate dehydrogenase E1 component alpha subunit [Anaplasma centrale str. Israel] gi|56387665|gb|AAV86252.1| pyruvate dehydrogenase E1 component, alpha subunit precursor [Anaplasma marginale str. St. Maries] gi|269848982|gb|ACZ49626.1| pyruvate dehydrogenase E1 component alpha subunit [Anaplasma centrale str. Israel] Length = 372 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 175/317 (55%), Positives = 230/317 (72%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + EQ + +Y MLL+RRFEEK GQLYGMG++ GFCHL IGQEA+ VG++ L+ D ++ Sbjct: 55 ISDEQVVKSYHDMLLMRRFEEKVGQLYGMGLIRGFCHLYIGQEAIAVGLQNVLSSEDSIV 114 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YREHG +L G A+ I+AEL G+ G SKGKGGSMHMF+ F+GGHGIVGAQV + Sbjct: 115 TSYREHGFMLTSGESANTILAELMGKGTGCSKGKGGSMHMFNVAKNFFGGHGIVGAQVPI 174 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTGIAFA +Y++ + C GDGA NQGQVYESFN+A+LW L V+YV+ENN+YAMGTSV Sbjct: 175 GTGIAFAEQYKKGKGVVFTCLGDGAMNQGQVYESFNMASLWKLPVVYVVENNEYAMGTSV 234 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+S+ +RG +PG QVDGMDI AV A CR GP+++EM TYR+RG Sbjct: 235 PRSSSVVELYRRGEGCGVPGSQVDGMDIFAVIEAASNAAELCRNGNGPVLLEMKTYRFRG 294 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTR+E++E+R + DP+ ++++ +L +K A E L E VR+I+N +VEF Sbjct: 295 HSMSDPAKYRTRQEVDEVRDSRDPLCRLKEYVLKHKIAPESTLDGFEKQVREIVNGAVEF 354 Query: 347 AQSDKEPDPAELYSDIL 363 AQS EP+ ELY+D+ Sbjct: 355 AQSSPEPEAGELYTDVY 371 >gi|99080920|ref|YP_613074.1| pyruvate dehydrogenase (lipoamide) [Ruegeria sp. TM1040] gi|99037200|gb|ABF63812.1| Pyruvate dehydrogenase (lipoamide) [Ruegeria sp. TM1040] Length = 337 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 198/324 (61%), Positives = 252/324 (77%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + S + E+ YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KSAQKSNVSAEELTKYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ +T+YR+HGH+LACG+DA +MAELTGR+GG SKGKGGSMHMFS + FYGGHGI Sbjct: 65 EEGDKRVTSYRDHGHMLACGMDAGGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV LG G+AF++KY+ +D++ FGDGAANQGQVYE++N+A LW+L VI+VIENNQ Sbjct: 125 VGAQVPLGAGLAFSDKYKGNDRVTFTYFGDGAANQGQVYETYNMAQLWDLPVIFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTSV R++ KRG ++ I G +VDGM++ AVK ++AVA+CRA KGP I+E+ Sbjct: 185 YAMGTSVQRSTKSPALWKRGEAYGIKGEEVDGMNVLAVKEAGERAVAHCRAGKGPYILEV 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR DPIEQVR+ LL K ASE DLK I+ ++ I Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMREERDPIEQVREMLLTGKHASEEDLKAIDKEIKDI 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N S +FA+ EP EL++DI Sbjct: 305 VNKSADFAKESPEPALEELWTDIY 328 >gi|154247811|ref|YP_001418769.1| pyruvate dehydrogenase (acetyl-transferring) [Xanthobacter autotrophicus Py2] gi|154161896|gb|ABS69112.1| Pyruvate dehydrogenase (acetyl-transferring) [Xanthobacter autotrophicus Py2] Length = 335 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 215/324 (66%), Positives = 268/324 (82%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + F K+Q+L AYR MLLIRRFEEKAGQ+YGMG++GGFCHL IGQEAV+VGM+M++ Sbjct: 11 DASAPAPFTKDQDLLAYREMLLIRRFEEKAGQMYGMGLIGGFCHLYIGQEAVVVGMQMAM 70 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 GDQ+IT YR+HGH+L+ G+ A +MAELTGR+GG+SKGKGGSMHMFS + F+GGHGI Sbjct: 71 KPGDQVITGYRDHGHMLSTGMAARGVMAELTGRRGGLSKGKGGSMHMFSIEKQFFGGHGI 130 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQVSLGTG+AFA++YR + + V FGDGAANQGQVYESFN+A LW L V+YVIENN+ Sbjct: 131 VGAQVSLGTGLAFADRYRNNGAVSVTYFGDGAANQGQVYESFNMAELWKLPVVYVIENNK 190 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTSVSRASAQ +FSKRG SFNIPG QVDGMD++AVKA ++A+A+ R GP I+EM Sbjct: 191 YAMGTSVSRASAQQDFSKRGTSFNIPGEQVDGMDVQAVKAAGERALAFAREGNGPYILEM 250 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YR++EE+ +MR+ HDPIEQVR RLL A+E +LK+ + VR+I Sbjct: 251 QTYRYRGHSMSDPAKYRSKEEVQKMRTEHDPIEQVRNRLLETHGATEDELKKFDAEVREI 310 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N + +FA +D EPD +ELY+DIL Sbjct: 311 VNEATDFATNDPEPDASELYTDIL 334 >gi|260427198|ref|ZP_05781177.1| pyruvate dehydrogenase E1 component, alpha subunit [Citreicella sp. SE45] gi|260421690|gb|EEX14941.1| pyruvate dehydrogenase E1 component, alpha subunit [Citreicella sp. SE45] Length = 340 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 195/319 (61%), Positives = 241/319 (75%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + E+ YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ Sbjct: 10 PNVSPEELKQYYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDK 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 IT+YR+HGH+LACG+D + +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGAQV Sbjct: 70 RITSYRDHGHMLACGMDPNGVMAELTGREGGYSKGKGGSMHMFSREKHFYGGHGIVGAQV 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AFA+ Y + ++ FGDGAANQGQVYE+FN+AALW L V++VIENNQYAMGT Sbjct: 130 PLGAGLAFADNYLENKRVTFTYFGDGAANQGQVYETFNMAALWKLPVVFVIENNQYAMGT 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S R+++ + RG F I G VDGMD+ AVK +KAVA+CRA KGP I+E+ TYRY Sbjct: 190 SQKRSTSTDDIHTRGAPFGIQGEIVDGMDVLAVKEAGEKAVAHCRAGKGPYILEIKTYRY 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE+ +MR D I+ VR LL K A+E DLK I+ ++ I+N S Sbjct: 250 RGHSMSDPAKYRTREEVQKMREERDCIQNVRDLLLQGKHATEDDLKAIDKEIKDIVNASA 309 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFA+ EP EL++DI Sbjct: 310 EFAKESPEPALDELWTDIY 328 >gi|158423365|ref|YP_001524657.1| pyruvate dehydrogenase alpha subunit [Azorhizobium caulinodans ORS 571] gi|158330254|dbj|BAF87739.1| pyruvate dehydrogenase alpha subunit [Azorhizobium caulinodans ORS 571] Length = 337 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 217/319 (68%), Positives = 267/319 (83%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V F KEQEL AYR MLLIRRFEEKAGQ+YGMG++GGFCHL IGQEAV+VGM+M++ +GD Sbjct: 17 VPTFTKEQELLAYREMLLIRRFEEKAGQMYGMGLIGGFCHLYIGQEAVVVGMQMAMKQGD 76 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q+IT YR+HGH+LA G+++ +MAELTGR+GG SKGKGGSMHMFS + F+GGHGIVGAQ Sbjct: 77 QVITGYRDHGHMLATGMESRGVMAELTGRKGGYSKGKGGSMHMFSIEKQFFGGHGIVGAQ 136 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTG+ FAN YR + + V FGDGAANQGQVYESFN+A LW L V+YVIENN+YAMG Sbjct: 137 VSLGTGLGFANHYRENGSVSVTYFGDGAANQGQVYESFNMAELWKLPVVYVIENNKYAMG 196 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+VSRASAQT+FSKRG SFNIPG QVDGMD+RAVKA ++A+ + R+ KGP I+EM TYR Sbjct: 197 TAVSRASAQTDFSKRGQSFNIPGEQVDGMDVRAVKAAGERALEFARSGKGPYILEMQTYR 256 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YR++EE+ +MR+ HDPIEQVR RLL +E +LK+++ +R I+N++ Sbjct: 257 YRGHSMSDPAKYRSKEEVQKMRTEHDPIEQVRNRLLEAGLVTEDELKKVDAEIRDIVNDA 316 Query: 344 VEFAQSDKEPDPAELYSDI 362 +FA D EPDP+ELY+DI Sbjct: 317 ADFATHDPEPDPSELYTDI 335 >gi|89054182|ref|YP_509633.1| pyruvate dehydrogenase (lipoamide) [Jannaschia sp. CCS1] gi|88863731|gb|ABD54608.1| Pyruvate dehydrogenase (lipoamide) [Jannaschia sp. CCS1] Length = 347 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 194/319 (60%), Positives = 247/319 (77%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S + ++ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ Sbjct: 19 SNVSADELKTYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAAEEGDK 78 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +T+YR+HGH+LACG+D +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIV AQV Sbjct: 79 RVTSYRDHGHMLACGMDPKGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGIVAAQV 138 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +G G+AFA+KY +D++ FGDGAANQGQVYE++N+A +W L I+VIENNQYAMGT Sbjct: 139 PIGAGLAFADKYLGNDRVTFTYFGDGAANQGQVYEAYNMAEIWGLPCIFVIENNQYAMGT 198 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S R++ ++ +RG ++ IPG +VDGMD+ AVKA +KAVA+CRA KGP I+E+ TYRY Sbjct: 199 STKRSTHSPSYWERGAAYGIPGEEVDGMDVLAVKAAGEKAVAHCRAGKGPYILEIKTYRY 258 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRTREE+ EMR D IE VR+ LL ASE DLK I+ +++I+N S Sbjct: 259 RGHSMSDPAKYRTREEVQEMREKRDAIEHVRQMLLTGGHASEDDLKAIDKEIKEIVNASA 318 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFA+ EP EL++DI Sbjct: 319 EFAKESPEPALEELWTDIY 337 >gi|326798569|ref|YP_004316388.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Sphingobacterium sp. 21] gi|326549333|gb|ADZ77718.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sphingobacterium sp. 21] Length = 331 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 164/320 (51%), Positives = 215/320 (67%), Gaps = 1/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + KE L Y+ MLL+R+FEEKAGQLYG + GFCHL IGQEAV+ G L + D Sbjct: 4 TPITKETYLEWYKSMLLMRKFEEKAGQLYGQQKIRGFCHLYIGQEAVVAGAMSVLRKEDS 63 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 MITAYR+H H LA G+ A+ MAEL G+ G SKGKGGSMH F +N F GGHGIVG Q+ Sbjct: 64 MITAYRDHAHALAKGMSANAAMAELFGKVTGCSKGKGGSMHFFDKENNFAGGHGIVGGQI 123 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AFA KY +D +CV GDGA QG + E+FN+A LW L VI+V ENN YAMGT Sbjct: 124 PLGAGLAFAEKYNGTDNVCVCYMGDGAVRQGSLNETFNMAMLWKLPVIFVCENNGYAMGT 183 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R + + K G+ F++P VDGMD+ AV MD+AV R +GP +E+ TYRY Sbjct: 184 SVKRTTNMIDIYKMGLGFDMPSAPVDGMDVVAVHNAMDEAVQRARKGEGPTFLEIRTYRY 243 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +GHSMSDPA YRT+EE+ + DPI V+ ++ NK+A E + E V++I++ +V Sbjct: 244 KGHSMSDPAKYRTKEELEQY-KERDPIAAVKHAIIENKYADEQWFDQEEAEVKRIVDEAV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FA+ + P+P ELY+D+ + Sbjct: 303 KFAEESEYPNPEELYTDVYV 322 >gi|90419623|ref|ZP_01227533.1| pyruvate dehydrogenase, alpha subunit [Aurantimonas manganoxydans SI85-9A1] gi|90336560|gb|EAS50301.1| pyruvate dehydrogenase, alpha subunit [Aurantimonas manganoxydans SI85-9A1] Length = 314 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 204/305 (66%), Positives = 261/305 (85%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M++ EGD+++T YR+HGH+LA Sbjct: 1 MLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAMKEGDEVVTGYRDHGHMLAT 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G++A +MAELTGR+ G SKGKGGSMHMFS + F+GGHGIVGAQV +GTG+AF+N+Y+ Sbjct: 61 GMEARGVMAELTGRRSGYSKGKGGSMHMFSKEKKFFGGHGIVGAQVPIGTGLAFSNRYKG 120 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 +D I + FGDGAANQGQVYESFN+A+LW L V+YVIENN+YAMGTSV+RASA+TNF+ R Sbjct: 121 NDSISITYFGDGAANQGQVYESFNMASLWKLPVVYVIENNRYAMGTSVNRASAETNFAHR 180 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 G+SF IPG+QVDGMD+RAVKA D A +CR+ +GPII+EM+TYRYRGHSMSDPA YR+R Sbjct: 181 GLSFKIPGIQVDGMDVRAVKAAGDLAAEHCRSGEGPIILEMMTYRYRGHSMSDPAKYRSR 240 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +E+ +MRS DPIEQV++RL+ + SE D+K+I+ VR+I+ +S +FAQ+D EPD +EL Sbjct: 241 DEVQKMRSESDPIEQVKRRLMEEQGMSEDDVKDIDKKVREIVADSADFAQNDPEPDVSEL 300 Query: 359 YSDIL 363 ++DI Sbjct: 301 WTDIY 305 >gi|255002773|ref|ZP_05277737.1| pyruvate dehydrogenase E1 component, alpha subunit precursor [Anaplasma marginale str. Puerto Rico] Length = 372 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 175/317 (55%), Positives = 230/317 (72%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + EQ + +Y MLL+RRFEEK GQLYGMG++ GFCHL IGQEA+ VG++ L+ D ++ Sbjct: 55 ISDEQVVKSYHDMLLMRRFEEKVGQLYGMGLIRGFCHLYIGQEAIAVGLQNVLSSEDSIV 114 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YREHG +L G A+ I+AEL G+ G SKGKGGSMHMF+ F+GGHGIVGAQV + Sbjct: 115 TSYREHGFMLTSGESANTILAELMGKGTGCSKGKGGSMHMFNVAKNFFGGHGIVGAQVPI 174 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTGIAFA +Y++ + C GDGA NQGQVYESFN+A+LW L V+YV+ENN+YAMGTSV Sbjct: 175 GTGIAFAEQYKKGRGVVFTCLGDGAMNQGQVYESFNMASLWKLPVVYVVENNEYAMGTSV 234 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+S+ +RG +PG QVDGMDI AV A CR GP+++EM TYR+RG Sbjct: 235 PRSSSVVELYRRGEGCGVPGSQVDGMDIFAVIEAASNAAELCRNGNGPVLLEMKTYRFRG 294 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTR+E++E+R + DP+ ++++ +L +K A E L E VR+I+N +VEF Sbjct: 295 HSMSDPAKYRTRQEVDEVRDSRDPLCRLKEYVLKHKIAPESTLDGFEKQVREIVNGAVEF 354 Query: 347 AQSDKEPDPAELYSDIL 363 AQS EP+ ELY+D+ Sbjct: 355 AQSSPEPEAGELYTDVY 371 >gi|259419155|ref|ZP_05743072.1| pyruvate dehydrogenase E1 component, alpha subunit [Silicibacter sp. TrichCH4B] gi|259345377|gb|EEW57231.1| pyruvate dehydrogenase E1 component, alpha subunit [Silicibacter sp. TrichCH4B] Length = 337 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 196/324 (60%), Positives = 252/324 (77%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + S + E+ YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KSAQKSNVSAEELTKYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ +T+YR+HGH+LACG+DA +MAELTGR+GG SKGKGGSMHMFS + FYGGHGI Sbjct: 65 EEGDKRVTSYRDHGHMLACGMDAGGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV LG G+AF++KY+ +D++ FGDGAANQGQVYE++N+A LW+L V++VIENNQ Sbjct: 125 VGAQVPLGAGLAFSDKYKGNDRVTFTYFGDGAANQGQVYETYNMAQLWDLPVVFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTSV R++ KRG ++ I G +VDGM++ AVK ++AVA+CRA KGP I+E+ Sbjct: 185 YAMGTSVQRSTKSPALWKRGEAYGIAGEEVDGMNVLAVKEAGERAVAHCRAGKGPYILEV 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR DPIEQVR+ LL K A+E DLK I+ ++ I Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMREERDPIEQVREMLLTGKHATEEDLKAIDKEIKDI 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N S +FA+ EP EL++DI Sbjct: 305 VNKSADFAKESPEPALEELWTDIY 328 >gi|114327847|ref|YP_745004.1| pyruvate dehydrogenase E1 component alpha subunit [Granulibacter bethesdensis CGDNIH1] gi|114316021|gb|ABI62081.1| pyruvate dehydrogenase E1 component alpha subunit [Granulibacter bethesdensis CGDNIH1] Length = 364 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 188/338 (55%), Positives = 251/338 (74%), Gaps = 1/338 (0%) Query: 26 AATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLC 85 AT D + + +++ L+A++ M+LIRRFEEKAGQLYGMG++GGFCHL Sbjct: 21 QATKGNRTPDNRGQKISDQRPLDQKALLTAFQDMMLIRRFEEKAGQLYGMGLIGGFCHLY 80 Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 IGQEAV+VG++ +L +GDQ++T+YR+HGH+LA G+D +MAELTGR+ G S+GKGGSMH Sbjct: 81 IGQEAVVVGIQAALEDGDQVVTSYRDHGHMLATGMDPKGVMAELTGRRDGYSRGKGGSMH 140 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAA 205 MFS + FYGGHGIVGAQV + GIA+AN+YR + K+ VV +GDGA++QGQVYE++N+AA Sbjct: 141 MFSREKNFYGGHGIVGAQVPIAAGIAYANQYRGNGKVSVVYYGDGASSQGQVYETYNLAA 200 Query: 206 LWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAV 265 L L V++VIENN+Y MGTSV RA+A + S+ G +NIPG QVDGMD++AV +AV Sbjct: 201 LLKLPVLFVIENNKYGMGTSVDRATASHDLSQNGTPWNIPGRQVDGMDVQAVYEAAREAV 260 Query: 266 AYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWAS 325 A+CR+ KGP ++EM TYRYRGHSMSDP YRTREEI +MR+ D I+ R+ L+ Sbjct: 261 AHCRSGKGPYLLEMQTYRYRGHSMSDPGKYRTREEIQKMRAERDCIDHARQELIALG-TD 319 Query: 326 EGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 E LKEIE ++K + + FAQ EPD +EL++DIL Sbjct: 320 ETVLKEIEDAIKKRVAEAATFAQESPEPDESELWTDIL 357 >gi|77463042|ref|YP_352546.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacter sphaeroides 2.4.1] gi|126461917|ref|YP_001043031.1| pyruvate dehydrogenase (acetyl-transferring) [Rhodobacter sphaeroides ATCC 17029] gi|221638900|ref|YP_002525162.1| Pyruvate dehydrogenase [Rhodobacter sphaeroides KD131] gi|332557918|ref|ZP_08412240.1| Pyruvate dehydrogenase [Rhodobacter sphaeroides WS8N] gi|77387460|gb|ABA78645.1| Pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacter sphaeroides 2.4.1] gi|126103581|gb|ABN76259.1| Pyruvate dehydrogenase (acetyl-transferring) [Rhodobacter sphaeroides ATCC 17029] gi|221159681|gb|ACM00661.1| Pyruvate dehydrogenase [Rhodobacter sphaeroides KD131] gi|332275630|gb|EGJ20945.1| Pyruvate dehydrogenase [Rhodobacter sphaeroides WS8N] Length = 329 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 195/324 (60%), Positives = 248/324 (76%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + E S +KE+ + YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KSPEQSNASKEELVRYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ IT+YR+HGH+LACG+DA +MAELTGR+GG SKGKGGSMHMFS + FYGGHGI Sbjct: 65 KEGDKRITSYRDHGHMLACGMDAKGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV LG G+AFA++Y +D + FGDGAANQGQVYE++N+A LW+L VI+VIENNQ Sbjct: 125 VGAQVPLGAGLAFADRYLGNDNVTFTYFGDGAANQGQVYEAYNMARLWSLPVIFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTSV R++ + +RG ++ I G VDGMD+ AVKA +KAVA CRA +GP I+EM Sbjct: 185 YAMGTSVKRSTKSPSLWERGAAYGIKGESVDGMDVLAVKAAGEKAVAACRAGQGPYILEM 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +TYRYRGHSMSDPA YRTREE+ MR D IE VR L+ A++ DLK I+ ++ + Sbjct: 245 MTYRYRGHSMSDPAKYRTREEVQRMRDEKDAIEHVRDLLIQGNLATDDDLKAIDKEIKAV 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N + +FA+ EP EL++DI Sbjct: 305 VNEAADFAKESPEPALEELWTDIY 328 >gi|84687413|ref|ZP_01015291.1| Pyruvate dehydrogenase E1 component, alpha subunit [Maritimibacter alkaliphilus HTCC2654] gi|84664571|gb|EAQ11057.1| Pyruvate dehydrogenase E1 component, alpha subunit [Rhodobacterales bacterium HTCC2654] Length = 329 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 197/324 (60%), Positives = 254/324 (78%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + S +KE+ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KSAKKSNTSKEELLEHYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ +T+YR+HGH+LACG+D +MAELTGR+GG SKGKGGSMHMFST+ FYGGHGI Sbjct: 65 EEGDKRVTSYRDHGHMLACGMDPKGVMAELTGREGGYSKGKGGSMHMFSTEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV +G G+AFA+KY +D++ FGDGAANQGQV E++N+A LW+L VI+VIENNQ Sbjct: 125 VGAQVPIGAGLAFADKYLGNDRVTFTYFGDGAANQGQVAETYNMAELWDLPVIFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTS+ RA+ + +RG ++ I G +VDGMD+ AVKA +KA+A+CRA KGP I+EM Sbjct: 185 YAMGTSMKRATKSPSLWERGAAYGIEGEEVDGMDVLAVKAAGEKAIAHCRAGKGPYILEM 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR DPIE VR L+ K ASE DLK ++ +++I Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMRDEKDPIEHVRDLLIQGKHASEDDLKAVDKEIKQI 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N++ +FA+ EP EL++DI Sbjct: 305 VNDAADFARESPEPALDELWTDIY 328 >gi|254479041|ref|ZP_05092397.1| pyruvate dehydrogenase E1 component, alpha subunit [Carboxydibrachium pacificum DSM 12653] gi|214035037|gb|EEB75755.1| pyruvate dehydrogenase E1 component, alpha subunit [Carboxydibrachium pacificum DSM 12653] Length = 328 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 128/318 (40%), Positives = 186/318 (58%), Gaps = 1/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E ++E L Y M+ IR+FEE+ +L+ G V GF HL IG+EAV VG+ +L E D + Sbjct: 2 EISREVLLDMYTRMVKIRKFEERVAELFAQGKVLGFVHLYIGEEAVAVGVCENLKEEDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH++A G D +MAEL G++ G KGKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHLIAKGGDLKYMMAELFGKETGYCKGKGGSMHIADATKGILGANGIVGGGFP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A + K R +D++ V FGDGA+NQ +E+ NIA++W L V++V ENN Y + Sbjct: 122 IAAGAALSAKMRGTDQVAVCFFGDGASNQATFHEALNIASIWKLPVVFVCENNLYGISMR 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R A + + R V + IPG+ VDG D+ AV +A+ R GP ++E TYRYR Sbjct: 182 QDRHQAIKDIADRAVGYGIPGVTVDGNDVLAVYEVAKEAINRARNGAGPTLVECKTYRYR 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR +EE+ E + DPI ++ + +L N ASE +LK+IE + + + +V+ Sbjct: 242 GHFEGDPTVYRPKEEVEEWLAK-DPILRLTRYILDNDIASEKELKDIEAKIIEEVEEAVK 300 Query: 346 FAQSDKEPDPAELYSDIL 363 FA+ P D+ Sbjct: 301 FAEESPYPKEEAAVEDVY 318 >gi|119386599|ref|YP_917654.1| pyruvate dehydrogenase (acetyl-transferring) [Paracoccus denitrificans PD1222] gi|119377194|gb|ABL71958.1| Pyruvate dehydrogenase (acetyl-transferring) [Paracoccus denitrificans PD1222] Length = 343 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 199/320 (62%), Positives = 247/320 (77%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +K++ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ EGD Sbjct: 11 TPNVSKDELLKYYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLESIAKEGD 70 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + IT+YR+HGH+LACG++A +MAELTGR GG SKGKGGSMHMFS + FYGGHGIV AQ Sbjct: 71 KRITSYRDHGHMLACGMEARGVMAELTGRIGGYSKGKGGSMHMFSREKHFYGGHGIVAAQ 130 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V LG G+AFA+KY +D + V FGDGA+NQGQVYE++N+A LW L V++VIENNQYAMG Sbjct: 131 VPLGAGLAFADKYLGNDNVTFVYFGDGASNQGQVYETYNMAELWELPVVFVIENNQYAMG 190 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TS+ R++ T RG SF I G QVDGMD+ AV+A +KAVA+CRA KGP I+E++TYR Sbjct: 191 TSMKRSTKSTTLFGRGESFGIKGEQVDGMDVLAVRAAGEKAVAHCRAGKGPYILEVMTYR 250 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSDPA YRTREE+ +MR D IE VR+ LL + ASE DLK I+ ++ I+N+S Sbjct: 251 YRGHSMSDPAKYRTREEVQKMRDERDAIEHVRELLLQGQHASEEDLKAIDKEIKDIVNDS 310 Query: 344 VEFAQSDKEPDPAELYSDIL 363 EFA+ EP EL++DI Sbjct: 311 AEFAKESPEPPLEELWTDIY 330 >gi|103486018|ref|YP_615579.1| pyruvate dehydrogenase (lipoamide) [Sphingopyxis alaskensis RB2256] gi|98976095|gb|ABF52246.1| Pyruvate dehydrogenase (lipoamide) [Sphingopyxis alaskensis RB2256] Length = 356 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 200/365 (54%), Positives = 256/365 (70%), Gaps = 13/365 (3%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLML 60 M A T K+A P+ ++ R D ++ YR ML Sbjct: 1 MAKAPARKTAAPKKVAATPAPASNREGPRDPVPYDA-----------TPQELEKFYRDML 49 Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGHILACG 119 LIRRFEEKAGQLYG+G++GGFCHL IGQEAV VG++ +L + D +IT YR+HGH+LA G Sbjct: 50 LIRRFEEKAGQLYGLGLIGGFCHLYIGQEAVAVGLQSALDGDKDSVITGYRDHGHMLAYG 109 Query: 120 VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 +D IMAELTGR GISKGKGGSMHMFS ++ FYGGHGIVGAQVSLGTG+AFA+KYR Sbjct: 110 IDPKVIMAELTGRAAGISKGKGGSMHMFSVEHKFYGGHGIVGAQVSLGTGLAFAHKYRGD 169 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 + + FGDGAANQGQVYESFN+A LW L +I+VIENNQYAMGTSV+RASA+ +RG Sbjct: 170 GGVAMAYFGDGAANQGQVYESFNMAELWKLPIIFVIENNQYAMGTSVNRASAEDQLYRRG 229 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTRE 299 SF IPGMQVDGMD+ AV+ + A+ + RA +GP+++E+ TYRYRGHSMSDPA YR+RE Sbjct: 230 ESFRIPGMQVDGMDVLAVRGAAEAALEWVRAGRGPVLMELKTYRYRGHSMSDPAKYRSRE 289 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 E+ +R D IE ++K L+ E +K+I+ +R I+ S +FA+S EPD +ELY Sbjct: 290 EVQAVRDKSDAIEHLKK-LMEGAGIGEDRIKDIDKEIRAIVAESADFAESAPEPDLSELY 348 Query: 360 SDILI 364 +D+L+ Sbjct: 349 TDVLV 353 >gi|255262694|ref|ZP_05342036.1| pyruvate dehydrogenase E1 component, alpha subunit [Thalassiobium sp. R2A62] gi|255105029|gb|EET47703.1| pyruvate dehydrogenase E1 component, alpha subunit [Thalassiobium sp. R2A62] Length = 333 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 194/324 (59%), Positives = 249/324 (76%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + + + ++ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KSTKKPNVSADELLGHYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ +T+YR+HGH+LACG+D IMAELTGR+GG SKGKGGSMHMFS + FYGGHGI Sbjct: 65 DEGDKRVTSYRDHGHMLACGMDPKGIMAELTGREGGFSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 V AQV LG G+AF++KY+ +D++ FGDGAANQGQVYE++N+A LW+L V++VIENNQ Sbjct: 125 VAAQVPLGAGLAFSDKYKGNDRVTFAYFGDGAANQGQVYETYNMAELWDLPVVFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTSV R++ + +RG ++ I G +VDGMD+ AVK +KAVA+CRA KGP I+E+ Sbjct: 185 YAMGTSVQRSTKSPSLWERGAAYGIEGEEVDGMDVLAVKEAGEKAVAHCRAGKGPYILEV 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHSMSDPA YRTREE+ +MR DPIEQVR LL K ASE DLK I+ ++ I Sbjct: 245 KTYRYRGHSMSDPAKYRTREEVQKMRDERDPIEQVRDLLLTGKHASEDDLKSIDKEIKAI 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N + EF++ E EL++DI Sbjct: 305 VNEAAEFSKESPELALEELWTDIY 328 >gi|66267554|gb|AAH94760.1| PDHA2 protein [Homo sapiens] Length = 407 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 174/361 (48%), Positives = 235/361 (65%), Gaps = 7/361 (1%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIR 63 + V + L S ++ AT + D+ LE G V+ + + L YR+ML +R Sbjct: 30 RRVAQKSARRVLVASRNSSNDATFEIKKCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVR 89 Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 R E KA QLY + GFCHLC GQEA VG++ + D +IT+YR HG G+ Sbjct: 90 RMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVR 149 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I+AELTGR+GG +KGKGGSMHM++ FYGG+GIVGAQ LG GIA A KY+ +D+IC Sbjct: 150 SILAELTGRRGGCAKGKGGSMHMYTK--NFYGGNGIVGAQGPLGAGIALACKYKGNDEIC 207 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + +GDGAANQGQ+ E+FN+AALW L +++ ENN Y MGTS RA+A ++ KRG Sbjct: 208 LTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAASPDYYKRGNF-- 265 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEIN 302 IPG++VDGMD+ V+ A YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI Sbjct: 266 IPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQ 325 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 E+RS DPI ++ R++++K A+ +LKEI VRK I+++ +FA +D EP EL I Sbjct: 326 EVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLEELGHHI 385 Query: 363 L 363 Sbjct: 386 Y 386 >gi|209963466|ref|YP_002296381.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodospirillum centenum SW] gi|209956932|gb|ACI97568.1| pyruvate dehydrogenase E1 component, alpha subunit [Rhodospirillum centenum SW] Length = 337 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 191/316 (60%), Positives = 248/316 (78%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 E+ L YR MLLIRRFEEKAGQ+YGMG++GGFCHL IGQEAV+VG++ +L GD +IT+ Sbjct: 21 PEELLKYYREMLLIRRFEEKAGQMYGMGLIGGFCHLYIGQEAVVVGIQNALRPGDSIITS 80 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HGH+LAC +D +MAELTGR+GG SKGKGGSMHMFS + F+GGHGIVGAQV +GT Sbjct: 81 YRDHGHMLACQMDPKGVMAELTGRRGGYSKGKGGSMHMFSREKKFFGGHGIVGAQVPIGT 140 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+AFA+KY + D I V GDGA NQGQVYESFN+AALW+L V+YVIENN+YAMGT+ +R Sbjct: 141 GLAFAHKYAKDDGIAVCYMGDGAVNQGQVYESFNMAALWHLPVLYVIENNKYAMGTAQTR 200 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 +SA RG ++ IPG QV+GMD+ V+ D+AVA+ R +GP+I+EM TYRYRGHS Sbjct: 201 SSAGE-LYMRGSAYGIPGRQVNGMDVLEVRGAADEAVAHVRGGQGPMILEMKTYRYRGHS 259 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YRT+EE+N+MRS DPI+ ++ +LL +A E LK I+ V++++ + EFA Sbjct: 260 MSDPAKYRTKEEVNKMRSESDPIDHLKTKLLEKSYADEDALKVIDREVKQVVTEAAEFAT 319 Query: 349 SDKEPDPAELYSDILI 364 EPDP+EL++D+L+ Sbjct: 320 QSPEPDPSELWTDVLV 335 >gi|83950478|ref|ZP_00959211.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseovarius nubinhibens ISM] gi|83838377|gb|EAP77673.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Roseovarius nubinhibens ISM] Length = 308 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 193/306 (63%), Positives = 243/306 (79%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + EGD+ IT YR+HGH+LAC Sbjct: 1 MLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLESATKEGDKRITTYRDHGHMLAC 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+D + +MAELTGR+GG SKGKGGSMHMFS FYGGHGIVGA V LG G+AFA+KY+ Sbjct: 61 GMDPNGVMAELTGREGGYSKGKGGSMHMFSRDKHFYGGHGIVGANVPLGAGLAFADKYKG 120 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 +D + FGDGAANQGQVYE+FN+AALW+L VI+VIENNQYAMGTS R+++ + R Sbjct: 121 NDNVTFTYFGDGAANQGQVYETFNMAALWSLPVIFVIENNQYAMGTSQKRSTSSPDIYTR 180 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 G +F IPG VDGMD+ AVK +KAVA+CR+ KGP I+E+ TYRYRGHSMSDPA YRTR Sbjct: 181 GAAFGIPGEAVDGMDVLAVKEAGEKAVAHCRSGKGPYILEVKTYRYRGHSMSDPAKYRTR 240 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +E+ ++R D IE VR+ LL K A+E DLK I+ ++ I+N S EFA++ EP+ +EL Sbjct: 241 DEVQKVRDEMDAIEHVRELLLQGKHATEDDLKAIDKEIKSIVNESAEFAKTSPEPEVSEL 300 Query: 359 YSDILI 364 ++DI + Sbjct: 301 WTDIYV 306 >gi|187779709|ref|ZP_02996182.1| hypothetical protein CLOSPO_03305 [Clostridium sporogenes ATCC 15579] gi|187773334|gb|EDU37136.1| hypothetical protein CLOSPO_03305 [Clostridium sporogenes ATCC 15579] Length = 340 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 130/324 (40%), Positives = 191/324 (58%), Gaps = 1/324 (0%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 EG V + N+ + Y+ ML IR+FE+ A + G + GF HL IG+EAV G+ +L Sbjct: 10 EGKIVKKLNENSIVEMYKTMLKIRKFEQVAMNTFAEGKIPGFVHLYIGEEAVATGVCANL 69 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 + D + + +R HGHILA G D +MAEL G+ G KGKGGSMH+ G G +GI Sbjct: 70 KDSDYITSTHRGHGHILAKGGDLKFMMAELFGKATGYCKGKGGSMHIADATKGILGANGI 129 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGA ++ G + +YR +D++CV FGD + NQG +ES N+A++W L V++V ENN Sbjct: 130 VGAGHNIAVGAGLSAQYRGTDQVCVCFFGDASTNQGTFHESLNMASVWKLPVVFVCENNL 189 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 Y + S +R A + + RGV++N+PG+ VDG D+ AV +A+ R KGP +IE Sbjct: 190 YGISMSQNRHQAIKDVADRGVAYNVPGIVVDGNDVFAVYEAAKEAIKRAREGKGPTLIEC 249 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR+RGH DP Y+ EE E + DPI + K L+ N+ +E LKE++ V Sbjct: 250 KTYRHRGHFEGDPCVYKPTEEQEEWLAK-DPIPRFEKYLVENEILTEEKLKEVQNKVESQ 308 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 I+ +V+FA + P+ + D+ Sbjct: 309 IDEAVDFANNSPYPELESVLEDVY 332 >gi|4885543|ref|NP_005381.1| pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial precursor [Homo sapiens] gi|266687|sp|P29803|ODPAT_HUMAN RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; AltName: Full=PDHE1-A type II; Flags: Precursor gi|190790|gb|AAA60232.1| pyruvate dehydrogenase complex [Homo sapiens] gi|111185646|gb|AAI19657.1| Pyruvate dehydrogenase (lipoamide) alpha 2 [Homo sapiens] gi|111185648|gb|AAI19658.1| Pyruvate dehydrogenase (lipoamide) alpha 2 [Homo sapiens] gi|121934094|gb|AAI27639.1| Pyruvate dehydrogenase (lipoamide) alpha 2 [Homo sapiens] gi|121934212|gb|AAI27638.1| Pyruvate dehydrogenase (lipoamide) alpha 2 [Homo sapiens] gi|133777220|gb|AAH30697.3| Pyruvate dehydrogenase (lipoamide) alpha 2 [Homo sapiens] gi|189066860|dbj|BAG36600.1| unnamed protein product [Homo sapiens] Length = 388 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 174/361 (48%), Positives = 235/361 (65%), Gaps = 7/361 (1%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIR 63 + V + L S ++ AT + D+ LE G V+ + + L YR+ML +R Sbjct: 11 RRVAQKSARRVLVASRNSSNDATFEIKKCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVR 70 Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 R E KA QLY + GFCHLC GQEA VG++ + D +IT+YR HG G+ Sbjct: 71 RMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVR 130 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I+AELTGR+GG +KGKGGSMHM++ FYGG+GIVGAQ LG GIA A KY+ +D+IC Sbjct: 131 SILAELTGRRGGCAKGKGGSMHMYTK--NFYGGNGIVGAQGPLGAGIALACKYKGNDEIC 188 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + +GDGAANQGQ+ E+FN+AALW L +++ ENN Y MGTS RA+A ++ KRG Sbjct: 189 LTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAASPDYYKRGNF-- 246 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEIN 302 IPG++VDGMD+ V+ A YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI Sbjct: 247 IPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQ 306 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 E+RS DPI ++ R++++K A+ +LKEI VRK I+++ +FA +D EP EL I Sbjct: 307 EVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLEELGHHI 366 Query: 363 L 363 Sbjct: 367 Y 367 >gi|159184757|ref|NP_354435.2| pyruvate dehydrogenase alpha subunit [Agrobacterium tumefaciens str. C58] gi|159140045|gb|AAK87220.2| pyruvate dehydrogenase alpha subunit [Agrobacterium tumefaciens str. C58] Length = 306 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 218/306 (71%), Positives = 266/306 (86%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+MS EGDQ+ITAYR+HGH+LA Sbjct: 1 MLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMSQKEGDQVITAYRDHGHMLAL 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ A +MAELTGR+GG+SKGKGGSMHMFS + FYGGHGIVGAQVSLGTG+AFAN+YR Sbjct: 61 GMSARGVMAELTGRKGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVSLGTGLAFANRYRG 120 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 +D + V FGDGAANQGQVYESFN+AALW L +IY++ENN+YAMGTS +RA+AQ+N+S R Sbjct: 121 NDNVSVTYFGDGAANQGQVYESFNMAALWKLPIIYIVENNRYAMGTSTARATAQSNYSLR 180 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 G SF IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EMLTYRYRGHSMSDPA YR++ Sbjct: 181 GQSFGIPGVQVDGMDVRAVKAAADQALEHCRSGKGPIILEMLTYRYRGHSMSDPAKYRSK 240 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 +E+ +MRS HDPIEQV+ RLL + WASE +LK I+ +VR I+ +S +FAQ+D EPD +EL Sbjct: 241 DEVQKMRSEHDPIEQVKARLLDHGWASEDELKAIDKDVRDIVADSADFAQNDPEPDVSEL 300 Query: 359 YSDILI 364 Y+DIL+ Sbjct: 301 YTDILL 306 >gi|332819831|ref|XP_526637.2| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial [Pan troglodytes] Length = 388 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 174/361 (48%), Positives = 234/361 (64%), Gaps = 7/361 (1%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIR 63 + V + L S + AT + D+ LE G V+ + + L YR+ML +R Sbjct: 11 RRVAQKSARRVLVASRKSSNDATFEIKKCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVR 70 Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 R E KA QLY + GFCHLC GQEA VG++ + D +IT+YR HG G+ Sbjct: 71 RMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVR 130 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I+AELTGR+GG +KGKGGSMHM++ FYGG+GIVGAQ LG GIA A KY+ +D+IC Sbjct: 131 SILAELTGRRGGCAKGKGGSMHMYTK--NFYGGNGIVGAQGPLGAGIALACKYKGNDEIC 188 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + +GDGAANQGQ+ E+FN+AALW L +++ ENN Y MGTS RA+A ++ KRG Sbjct: 189 LTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAASPDYYKRGNF-- 246 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEIN 302 IPG++VDGMD+ V+ A YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI Sbjct: 247 IPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQ 306 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 E+RS DPI ++ R++++K A+ +LKEI VRK I+++ +FA +D EP EL I Sbjct: 307 EVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLEELGHHI 366 Query: 363 L 363 Sbjct: 367 Y 367 >gi|49474127|ref|YP_032169.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella quintana str. Toulouse] gi|49239631|emb|CAF25990.1| Pyruvate dehydrogenase E1 component, alpha subunit [Bartonella quintana str. Toulouse] Length = 346 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 210/342 (61%), Positives = 275/342 (80%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 +K+ + S V + +++ F KE+E+ +YR MLLIRRFEEKAGQLYGMG++GGFC Sbjct: 5 SKKNSASVVHTALSNTTKRAQIARFTKEEEIHSYREMLLIRRFEEKAGQLYGMGLIGGFC 64 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEAV++G + EGDQ+IT+YR+HGH+LA G+ +MAELTGRQGG SKGKGG Sbjct: 65 HLYIGQEAVVIGTLKAAKEGDQVITSYRDHGHMLAVGMSPRGVMAELTGRQGGFSKGKGG 124 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMHMFS + FYGGHGIVGAQV +G+G+AF+N+Y D + +V FGDGAANQGQVYESFN Sbjct: 125 SMHMFSKEKNFYGGHGIVGAQVPIGSGLAFSNQYLGKDNVTLVYFGDGAANQGQVYESFN 184 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A+LW L V+Y+IENNQYAMGTSV RASA+ +FS+RG+SF+IPG+ VDGMD+RAVK D Sbjct: 185 MASLWKLPVVYIIENNQYAMGTSVVRASAEIDFSRRGLSFDIPGIVVDGMDVRAVKGAAD 244 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 +A+ + R+ KGPII++M TYRYRGHSMSDPA YR++EE+ +++ DPI+QV+ R+L Sbjct: 245 EAITWARSGKGPIILDMQTYRYRGHSMSDPAKYRSKEEVQKIKEEQDPIDQVKNRILTQG 304 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 +ASEGDLK I+ VR II ++ +FAQSD+EPD +ELY+D+L+ Sbjct: 305 FASEGDLKSIDKEVRAIIADAADFAQSDQEPDASELYTDVLV 346 >gi|327268272|ref|XP_003218922.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like [Anolis carolinensis] Length = 469 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 177/358 (49%), Positives = 234/358 (65%), Gaps = 7/358 (1%) Query: 9 TVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFE--VSEFNKEQELSAYRLMLLIRRFE 66 +V + +A AT V DI LE + +E+ L Y+ M IRR E Sbjct: 95 SVARVVVASRNYADFATEATFDVKKHDIHRLEESPSTTAVMTREEGLQYYKTMQTIRRME 154 Query: 67 EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIM 126 KA QLY ++ GFCHL GQEA VG++ ++ D +ITAYR H G+ +I+ Sbjct: 155 LKADQLYKQKIIRGFCHLYDGQEACCVGLEAAINPTDHLITAYRAHAFTYTRGISVREIL 214 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 AELTGR GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A KY D+ICV Sbjct: 215 AELTGRIGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALACKYFGKDEICVTL 272 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPG 246 +GDGAANQGQ++E+FN+AALW L I++ ENN+Y MGTSV RA+A T++ KRG IPG Sbjct: 273 YGDGAANQGQIFETFNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPG 330 Query: 247 MQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMR 305 ++VDGMD+ AV+ A +CR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+R Sbjct: 331 LRVDGMDVLAVREAAKFAANHCRSGKGPIVMELQTYRYHGHSMSDPGVSYRTREEIQEVR 390 Query: 306 SNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 S DPI ++ R+++N AS +LKEI++ VRK I ++ +FA +D EP +L + I Sbjct: 391 SKSDPITLLKDRMVNNNLASVEELKEIDVEVRKEIEDAAQFATTDPEPPLEDLGNHIY 448 >gi|58040714|ref|YP_192678.1| pyruvate dehydrogenase E1 component alpha subunit [Gluconobacter oxydans 621H] gi|58003128|gb|AAW62022.1| Pyruvate dehydrogenase E1 component alpha subunit [Gluconobacter oxydans 621H] Length = 334 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 186/320 (58%), Positives = 239/320 (74%), Gaps = 1/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + E AYR MLL+RRFEEKAGQLYGMG++GGFCHL IGQEAV+VG+ +++ +GD+ Sbjct: 14 PALSPETMKRAYRDMLLVRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGIGLNMKQGDK 73 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 IT+YR+HG +L G+ +MAELTGR GG S GKGGSMHMFS + FYGGHGIVGAQV Sbjct: 74 SITSYRDHGQMLVAGMTPRGVMAELTGRSGGYSHGKGGSMHMFSREKEFYGGHGIVGAQV 133 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 +LGTG+AFANKYR +D++ +V FG+GA+ QGQVYESFN+AAL L IYVIENN+Y MGT Sbjct: 134 ALGTGLAFANKYRGTDEVSIVYFGEGASAQGQVYESFNLAALHKLPCIYVIENNRYGMGT 193 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S+ RASA + S+ G + I +VDGMDI AV +A+ YCR+ KGP ++EM TYRY Sbjct: 194 SIERASASKDLSRNGEPWGIASRKVDGMDIFAVHEAAQEAMEYCRSGKGPFLLEMETYRY 253 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YR R E+ EMR DPIE ++ +L + E K+IE +V+ I+ ++ Sbjct: 254 RGHSMSDPAKYRQRAEVEEMRRTRDPIETLKAEMLRSG-IEESVFKDIETDVKAIVADAT 312 Query: 345 EFAQSDKEPDPAELYSDILI 364 EFAQ+ EPD +EL++DIL+ Sbjct: 313 EFAQTSPEPDVSELWTDILV 332 >gi|146277141|ref|YP_001167300.1| pyruvate dehydrogenase (acetyl-transferring) [Rhodobacter sphaeroides ATCC 17025] gi|145555382|gb|ABP69995.1| Pyruvate dehydrogenase (acetyl-transferring) [Rhodobacter sphaeroides ATCC 17025] Length = 329 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 195/324 (60%), Positives = 249/324 (76%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 + E S ++E+ L YR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VG++ + Sbjct: 5 KSPEQSNASREELLHYYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGLEAAA 64 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 EGD+ IT+YR+HGH+LACG+DA +MAELTGR+GG SKGKGGSMHMFS + FYGGHGI Sbjct: 65 KEGDKRITSYRDHGHMLACGMDAKGVMAELTGREGGYSKGKGGSMHMFSKEKHFYGGHGI 124 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VGAQV LG G+AFA++Y +D + FGDGAANQGQVYE++N+A LW+L VI+VIENNQ Sbjct: 125 VGAQVPLGAGLAFADRYLGNDNVTFAYFGDGAANQGQVYEAYNMAKLWSLPVIFVIENNQ 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 YAMGTSV R++ + +RG ++ I G VDGMD+ AVKA +KAVA CRA +GP I+EM Sbjct: 185 YAMGTSVKRSTKSPSLWERGAAYGIKGEAVDGMDVLAVKAAGEKAVAACRAGQGPYILEM 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 +TYRYRGHSMSDPA YRTREE+ MR D IE VR L+ A++ DLK I+ +++ + Sbjct: 245 MTYRYRGHSMSDPAKYRTREEVQRMRDEKDAIEHVRDLLIQGNLATDDDLKAIDKDIKAV 304 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 +N + +FA+ EP EL++DI Sbjct: 305 VNEAADFAKESPEPALEELWTDIY 328 >gi|119626468|gb|EAX06063.1| hCG1643458 [Homo sapiens] Length = 441 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 174/361 (48%), Positives = 235/361 (65%), Gaps = 7/361 (1%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIR 63 + V + L S ++ AT + D+ LE G V+ + + L YR+ML +R Sbjct: 64 RRVAQKSARRVLVASRNSSNDATFEIKKCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVR 123 Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 R E KA QLY + GFCHLC GQEA VG++ + D +IT+YR HG G+ Sbjct: 124 RMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVR 183 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I+AELTGR+GG +KGKGGSMHM++ FYGG+GIVGAQ LG GIA A KY+ +D+IC Sbjct: 184 SILAELTGRRGGCAKGKGGSMHMYTK--NFYGGNGIVGAQGPLGAGIALACKYKGNDEIC 241 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + +GDGAANQGQ+ E+FN+AALW L +++ ENN Y MGTS RA+A ++ KRG Sbjct: 242 LTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAASPDYYKRGNF-- 299 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEIN 302 IPG++VDGMD+ V+ A YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI Sbjct: 300 IPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQ 359 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 E+RS DPI ++ R++++K A+ +LKEI VRK I+++ +FA +D EP EL I Sbjct: 360 EVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLEELGHHI 419 Query: 363 L 363 Sbjct: 420 Y 420 >gi|302390554|ref|YP_003826375.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermosediminibacter oceani DSM 16646] gi|302201182|gb|ADL08752.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermosediminibacter oceani DSM 16646] Length = 328 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 126/318 (39%), Positives = 186/318 (58%), Gaps = 1/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + KE L Y M IR+FEEK +L+ G + GF HL IG+EA VG+ +LT+ D + Sbjct: 2 DLTKELLLDMYTKMNKIRKFEEKVSELFARGKILGFVHLYIGEEATAVGVCENLTDKDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH++A G D +MAEL G+ G KGKGGSMH+ + G G +GIVG + Sbjct: 62 TSTHRGHGHLIAKGGDLKFMMAELFGKATGYCKGKGGSMHIADVQKGILGANGIVGGGLP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G + K RR+D++ V FGDGA+N+G +E+ N+A++W L V++V ENN Y + Sbjct: 122 IAVGAGLSAKLRRTDQVAVCFFGDGASNEGTFHEALNMASIWKLPVVFVCENNLYGISMR 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R A + + R +++ PG+ VDG D+ AV +AV R GP +IE TYR+R Sbjct: 182 QDRHQAIADIADRAIAYGFPGVTVDGNDVLAVYEAAREAVKRAREGAGPTLIECKTYRWR 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR +EE+ E + DPI ++ + +L N +E +LKEIE N+ + + +V Sbjct: 242 GHFEGDPTVYRPKEEVEEWVA-RDPIPRLARYILDNNIVTEEELKEIECNIIRELEEAVR 300 Query: 346 FAQSDKEPDPAELYSDIL 363 FA+ P+ DI Sbjct: 301 FAEESPYPEETSAVEDIY 318 >gi|157825476|ref|YP_001493196.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia akari str. Hartford] gi|157799434|gb|ABV74688.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia akari str. Hartford] Length = 326 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 170/316 (53%), Positives = 230/316 (72%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE+ L A++ +LL+RRFEEK GQLYG+G +GGFCHL IGQEA IV + M +GD MIT+ Sbjct: 12 KEEYLRAFKEVLLVRRFEEKCGQLYGVGEIGGFCHLYIGQEAGIVAVNMVRQKGDSMITS 71 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+H HI+ G + ++AEL GR G SKGKGGSMH+F FYGGHGIVGAQV +GT Sbjct: 72 YRDHAHIILAGTEPKDVLAELMGRATGCSKGKGGSMHLFDVPRKFYGGHGIVGAQVPIGT 131 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+AFA KY ++ IC GDGA NQGQVYE+ N+AALW L V+Y+IENN+Y+MGTSV+R Sbjct: 132 GLAFAEKYNGTNNICFTFLGDGAVNQGQVYEALNMAALWGLPVVYIIENNEYSMGTSVAR 191 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++ + K+G SF I G Q+DGMD + +A Y R + P+I+E+ TYRYRGHS Sbjct: 192 STFMCDLYKKGESFGIKGCQLDGMDFEEMYNGFKQAAEYVRENSFPLILEVKTYRYRGHS 251 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YR++EE+ + DP+ +RK +L NK+A+E DLKEIE +V++I+ +VEF++ Sbjct: 252 MSDPAKYRSKEEVEKY-KERDPLVIIRKTILDNKYATEADLKEIEQSVKEIVKEAVEFSE 310 Query: 349 SDKEPDPAELYSDILI 364 + PD +ELY+++ + Sbjct: 311 NSPLPDESELYTNVYV 326 >gi|332186153|ref|ZP_08387899.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sphingomonas sp. S17] gi|332013968|gb|EGI56027.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sphingomonas sp. S17] Length = 309 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 193/307 (62%), Positives = 242/307 (78%), Gaps = 2/307 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMITAYREHGHILA 117 MLLIRRFEEKAGQLYG+G++GGFCHL IGQEAV VG++ +L + D +IT YR+HGH+LA Sbjct: 1 MLLIRRFEEKAGQLYGLGLIGGFCHLYIGQEAVAVGLQSALDGDKDSVITGYRDHGHMLA 60 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 G+D IMAELTGR GISKGKGGSMHMFST++ FYGGHGIVGAQVSLGTG+AF +KY Sbjct: 61 YGIDPKVIMAELTGRAAGISKGKGGSMHMFSTEHKFYGGHGIVGAQVSLGTGLAFGHKYS 120 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 +C+ FGDGAANQGQVYESFN+A LW L +I+VIENNQYAMGTSV+RAS++ + Sbjct: 121 NDGGVCLAYFGDGAANQGQVYESFNMAELWKLPIIFVIENNQYAMGTSVNRASSEDQLYR 180 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 RG SF IPG+QVDGMD+ A + ++A+A+ RA KGP+I+EM TYRYRGHSMSDPA YR+ Sbjct: 181 RGESFRIPGIQVDGMDVLACRGAAEEALAWVRAGKGPVILEMKTYRYRGHSMSDPAKYRS 240 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 REE+ +R DPI+ V+K L +E DLK +E +RK +N + +FA+ EPD AE Sbjct: 241 REEVQGVRDKSDPIDHVKKLLEAQGV-TEADLKVLEQEIRKQVNEAADFAEQTPEPDVAE 299 Query: 358 LYSDILI 364 LY+++L+ Sbjct: 300 LYTEVLV 306 >gi|148261801|ref|YP_001235928.1| pyruvate dehydrogenase (acetyl-transferring) [Acidiphilium cryptum JF-5] gi|326405304|ref|YP_004285386.1| pyruvate dehydrogenase E1 component alpha subunit [Acidiphilium multivorum AIU301] gi|146403482|gb|ABQ32009.1| Pyruvate dehydrogenase (acetyl-transferring) [Acidiphilium cryptum JF-5] gi|325052166|dbj|BAJ82504.1| pyruvate dehydrogenase E1 component alpha subunit [Acidiphilium multivorum AIU301] Length = 345 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 192/318 (60%), Positives = 254/318 (79%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++++ L+AY MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+ GM++++ GDQ+I Sbjct: 27 MDRDELLAAYEKMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVTGMQLAIEPGDQVI 86 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HGH++AC +D +MAELTGR GG SKGKGGSMHMFS + GF+GGHGIVGAQVSL Sbjct: 87 TSYRDHGHMIACDMDPKGVMAELTGRAGGYSKGKGGSMHMFSKEKGFFGGHGIVGAQVSL 146 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTG+AFAN YR +D++C+ FG+GA+NQGQV+ESFN+AAL L VI++IENN+Y MGTSV Sbjct: 147 GTGLAFANHYRGNDRVCLTYFGEGASNQGQVFESFNLAALMKLPVIFIIENNRYGMGTSV 206 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA + S G ++IPG+QVDGMD++AVK ++AVA+CRA GP ++EM TYRYRG Sbjct: 207 ERASASRDLSLNGAPWSIPGLQVDGMDVQAVKEAGEQAVAHCRAGNGPFLLEMKTYRYRG 266 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTREE+ +MR+ HD I+ RK L S+ K I+ +++K + ++ +F Sbjct: 267 HSMSDPAKYRTREEVQKMRTEHDCIDLARKALEAMGV-SDEMFKAIDDDIKKRVQDAADF 325 Query: 347 AQSDKEPDPAELYSDILI 364 AQ EPD +EL++D+L+ Sbjct: 326 AQQSPEPDESELWTDVLV 343 >gi|133777225|gb|AAH66953.2| Pyruvate dehydrogenase (lipoamide) alpha 2 [Homo sapiens] Length = 388 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 174/361 (48%), Positives = 234/361 (64%), Gaps = 7/361 (1%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIR 63 + V + L S ++ AT + D+ LE G V+ + + L YR+ML +R Sbjct: 11 RRVAQKSARRVLVASRNSSNDATFEIKKCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVR 70 Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 R E KA QLY + GFCHLC GQEA VG++ + D +IT+YR HG G Sbjct: 71 RMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGPSVR 130 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I+AELTGR+GG +KGKGGSMHM++ FYGG+GIVGAQ LG GIA A KY+ +D+IC Sbjct: 131 SILAELTGRRGGCAKGKGGSMHMYTK--NFYGGNGIVGAQGPLGAGIALACKYKGNDEIC 188 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + +GDGAANQGQ+ E+FN+AALW L +++ ENN Y MGTS RA+A ++ KRG Sbjct: 189 LTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAASPDYYKRGNF-- 246 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEIN 302 IPG++VDGMD+ V+ A YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI Sbjct: 247 IPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQ 306 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 E+RS DPI ++ R++++K A+ +LKEI VRK I+++ +FA +D EP EL I Sbjct: 307 EVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLEELGHHI 366 Query: 363 L 363 Sbjct: 367 Y 367 >gi|194227717|ref|XP_001492207.2| PREDICTED: similar to Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor (PDHE1-A type I) [Equus caballus] Length = 390 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 183/370 (49%), Positives = 239/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVG----DIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G L S S AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLSGVAQKPASRVLVASRSFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLR 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 124 TFTRGLSVREILAELTGRRGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 181 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 182 KYFGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 241 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP Sbjct: 242 YYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGV 299 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 Query: 354 DPAELYSDIL 363 EL I Sbjct: 360 PLEELGHHIY 369 >gi|74006561|ref|XP_537975.2| PREDICTED: similar to Pyruvate dehydrogenase E1 component alpha subunit, somatic form, mitochondrial precursor (PDHE1-A type I) isoform 1 [Canis familiaris] Length = 390 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 182/370 (49%), Positives = 239/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVG----DIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G L S + AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLSGVSQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLR 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 124 TFTRGLSVREILAELTGRRGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 181 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 182 KYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 241 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP Sbjct: 242 YYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGV 299 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 Query: 354 DPAELYSDIL 363 EL I Sbjct: 360 PLEELGYHIY 369 >gi|88607434|ref|YP_504713.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Anaplasma phagocytophilum HZ] gi|88598497|gb|ABD43967.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Anaplasma phagocytophilum HZ] Length = 345 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 181/318 (56%), Positives = 225/318 (70%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E LSAY+ ML +RR EEK GQLYGMG++ GFCHL IGQEAV GM L D + Sbjct: 27 NLTNESVLSAYKHMLFMRRLEEKVGQLYGMGLIRGFCHLYIGQEAVAAGMYSVLQPSDSV 86 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YREHG L+ G KI+AEL GR G SKGKGGSMH+F+ + FYGGHGIVGAQV Sbjct: 87 ITSYREHGFALSSGESPGKIIAELLGRSAGSSKGKGGSMHIFNVQKNFYGGHGIVGAQVP 146 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +GTGIAFANKY+ + + C GDGA NQGQVYE+FN+AALW L V+YV+ENN+YAMGTS Sbjct: 147 IGTGIAFANKYKANGGVVFTCLGDGAINQGQVYEAFNMAALWKLPVVYVVENNEYAMGTS 206 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V+R+S ++ KRG S +PG +VDGMD+ V + +A A+CR GPI++EM TYRYR Sbjct: 207 VARSSYVSDLYKRGESCGVPGRRVDGMDLFEVIREVSQAAAHCREGNGPILLEMKTYRYR 266 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YRTREE+ E+R+N DP+ V+ +L + ASE L E +R I +VE Sbjct: 267 GHSMSDPAKYRTREEVEEIRNNRDPLCIVKSHILEHNMASEEVLTTWEKEIRDEIKKAVE 326 Query: 346 FAQSDKEPDPAELYSDIL 363 FA+ EP ELY+D+ Sbjct: 327 FAEGCPEPSVEELYTDVY 344 >gi|147903533|ref|NP_001087610.1| pyruvate dehydrogenase (lipoamide) alpha 1 [Xenopus laevis] gi|51703691|gb|AAH80995.1| Pdha1-b protein [Xenopus laevis] Length = 400 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 174/368 (47%), Positives = 237/368 (64%), Gaps = 12/368 (3%) Query: 4 AKQDVT-----VGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSE--FNKEQELSAY 56 A++ VT + MA AT + DI LE ++ +E+ L Y Sbjct: 16 AQKPVTGAANEAVRVMMASRNYADFASEATFDIKKCDIHRLEEEPPTQAVLTREEGLQYY 75 Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M IRR E K+ QLY ++ GFCHL GQEA VG++ + D +ITAYR HG+ Sbjct: 76 RTMQTIRRMELKSDQLYKQKIIRGFCHLYDGQEACCVGLESGINPTDHLITAYRAHGYTY 135 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 GV +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG G+A A K+ Sbjct: 136 TRGVSVKEILAELTGRRGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGVALACKF 193 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 ++ICV +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ Sbjct: 194 FGKNEICVSLYGDGAANQGQIFETYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYY 253 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANY 295 KRG IPG++VDGMD+ V+ A + R+ KGPI++E+ TYRY GHSMSDP +Y Sbjct: 254 KRGDY--IPGLRVDGMDVLCVREATKFAADHRRSGKGPILMELQTYRYHGHSMSDPGVSY 311 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREEI E+RS DPI ++ R+L+N ++ +LKEI++ VRK I + +FA +D EP Sbjct: 312 RTREEIQEVRSKSDPITLLKDRMLNNNLSNVEELKEIDVEVRKEIEEAAQFATTDPEPPL 371 Query: 356 AELYSDIL 363 E+ + I Sbjct: 372 EEIANHIY 379 >gi|291407172|ref|XP_002719987.1| PREDICTED: pyruvate dehydrogenase E1 alpha 1 [Oryctolagus cuniculus] Length = 390 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 182/370 (49%), Positives = 241/370 (65%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKR----AATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G + + + A R AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLSGAAQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 124 TFTRGLSVREILAELTGRRGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 181 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 182 KYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 241 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP Sbjct: 242 YYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGV 299 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 Query: 354 DPAELYSDIL 363 EL I Sbjct: 360 PLEELGHHIY 369 >gi|121602213|ref|YP_988849.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella bacilliformis KC583] gi|120614390|gb|ABM44991.1| pyruvate dehydrogenase E1 component, alpha subunit [Bartonella bacilliformis KC583] Length = 350 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 205/322 (63%), Positives = 268/322 (83%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 +++ F KE+E++AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+ G + EG Sbjct: 29 QIAHFTKEEEINAYREMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVTGTLKAAKEG 88 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 DQ+IT+YR+HGH+LA G+ +MAELTGR+GG SKGKGGSMHMFS + FYGGHGIVGA Sbjct: 89 DQIITSYRDHGHMLAAGMSPRGVMAELTGRRGGFSKGKGGSMHMFSKEKDFYGGHGIVGA 148 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QVSLGTG+AF+N+Y + D + +V FGDGAANQGQVYESFN+A+LW L V+YVIENNQYAM Sbjct: 149 QVSLGTGLAFSNQYLKKDNVALVYFGDGAANQGQVYESFNMASLWKLPVVYVIENNQYAM 208 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R++A +FS+RG+SF IPG+ VDGMD+ AVK D+A+++ R+ KGPII+++ TY Sbjct: 209 GTSVVRSAAGADFSRRGLSFEIPGIAVDGMDVCAVKGAADEAISWARSGKGPIILDIQTY 268 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDPA YR+++E+ ++++ HDPIEQV+ R++ WASE DLK I+ VR ++ + Sbjct: 269 RYRGHSMSDPAKYRSKDEVEKVKTEHDPIEQVKNRIIKQGWASEDDLKSIDKEVRAVVAD 328 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 + +FAQ+D+EPD ELY+DIL+ Sbjct: 329 AADFAQNDQEPDAFELYTDILV 350 >gi|6679261|ref|NP_032836.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor [Mus musculus] gi|548409|sp|P35486|ODPA_MOUSE RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor gi|200277|gb|AAA53046.1| pyruvate dehydrogenase [Mus musculus] gi|13938051|gb|AAH07142.1| Pyruvate dehydrogenase E1 alpha 1 [Mus musculus] gi|74138129|dbj|BAE28567.1| unnamed protein product [Mus musculus] gi|74141964|dbj|BAE41046.1| unnamed protein product [Mus musculus] gi|74204462|dbj|BAE39978.1| unnamed protein product [Mus musculus] gi|74207750|dbj|BAE40117.1| unnamed protein product [Mus musculus] gi|74217000|dbj|BAE26608.1| unnamed protein product [Mus musculus] gi|123232199|emb|CAM22390.1| pyruvate dehydrogenase E1 alpha 1 [Mus musculus] gi|148708861|gb|EDL40808.1| pyruvate dehydrogenase E1 alpha 1 [Mus musculus] Length = 390 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 182/370 (49%), Positives = 240/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKR----AATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G + + + A R AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLAGSAQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 124 TFTRGLPVRAILAELTGRRGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 181 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 182 KYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 241 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP Sbjct: 242 YYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGV 299 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 Query: 354 DPAELYSDIL 363 EL I Sbjct: 360 PLEELGYHIY 369 >gi|148379591|ref|YP_001254132.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A str. ATCC 3502] gi|153933670|ref|YP_001383969.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A str. ATCC 19397] gi|153936990|ref|YP_001387513.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A str. Hall] gi|153938705|ref|YP_001390967.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum F str. Langeland] gi|170761461|ref|YP_001787034.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A3 str. Loch Maree] gi|148289075|emb|CAL83165.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium botulinum A str. ATCC 3502] gi|152929714|gb|ABS35214.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A str. ATCC 19397] gi|152932904|gb|ABS38403.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A str. Hall] gi|152934601|gb|ABS40099.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum F str. Langeland] gi|169408450|gb|ACA56861.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A3 str. Loch Maree] gi|295319026|gb|ADF99403.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum F str. 230613] gi|322805947|emb|CBZ03512.1| acetoin dehydrogenase E1 component alpha-subunit [Clostridium botulinum H04402 065] Length = 327 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 127/320 (39%), Positives = 189/320 (59%), Gaps = 1/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + N+ + Y+ ML IR+FE+ A + G + GF HL IG+EAV G+ +L + D Sbjct: 1 MKKLNENSIVEMYKTMLKIRKFEQVAMNTFAEGKIPGFVHLYIGEEAVATGVCANLKDSD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGHILA G D +MAEL G+ G KGKGGSMH+ G G +GIVGA Sbjct: 61 YITSTHRGHGHILAKGGDLKFMMAELFGKATGYCKGKGGSMHIADATKGILGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 ++ G + +YR +D++CV FGD + NQG +ES N+A++W L V++V ENN Y + Sbjct: 121 HNIAVGAGLSAQYRGTDQVCVCFFGDASTNQGTFHESLNMASVWKLPVVFVCENNLYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S +R A + + RGV++N+PG+ VDG D+ AV +A+ R KGP +IE TYR Sbjct: 181 MSQNRHQAIKDVADRGVAYNVPGIVVDGNDVFAVYEAAKEAIKRAREGKGPTLIECKTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGH DP Y+ EE E + DPI + K L+ N+ +E LKE++ V I+ + Sbjct: 241 HRGHFEGDPCVYKPTEEQEEWLAK-DPIPRFEKYLVENEILTEEKLKEVQNKVESQIDEA 299 Query: 344 VEFAQSDKEPDPAELYSDIL 363 V+FA + P+ + D+ Sbjct: 300 VDFANNSPYPELESVLEDVY 319 >gi|124009357|ref|ZP_01694035.1| pyruvate dehydrogenase E1 component, alpha subunit [Microscilla marina ATCC 23134] gi|123985019|gb|EAY24970.1| pyruvate dehydrogenase E1 component, alpha subunit [Microscilla marina ATCC 23134] Length = 383 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 167/344 (48%), Positives = 219/344 (63%), Gaps = 1/344 (0%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 + A T + +F+KE + YR M LIR+FE K GQ+YG + Sbjct: 31 KIDKFMATTKDKKTASARKGKKSAKDKFDKETYMYWYRSMQLIRKFEAKCGQVYGRQKIK 90 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GF HL IGQEA G +L +GD+ ITAYR+HGH LA G D +MAEL G+ GISKG Sbjct: 91 GFLHLYIGQEACASGAVSALQKGDKYITAYRDHGHPLALGTDPKAVMAELYGKATGISKG 150 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMH+F ++GF GGHGIVG Q+ LG GIAFA KY ++ K+C+ GDGA QG +E Sbjct: 151 KGGSMHLFDKEHGFMGGHGIVGGQIPLGAGIAFAEKYNKTGKVCMCYMGDGAVRQGAFHE 210 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 + N+A W L VI+VIENN YAMGTSV R S T + G S++IP VD M + V Sbjct: 211 ALNMAMTWKLPVIFVIENNGYAMGTSVQRTSNVTELYQLGESYDIPSEPVDAMQVEEVHL 270 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLL 319 +++KA RA +GP ++E TYR++GHSMSDPA YRT+EE NE N DPIEQVR+ +L Sbjct: 271 SVEKAAERARAGEGPTLLEFRTYRFKGHSMSDPAKYRTKEEENEY-KNQDPIEQVRESIL 329 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 K+A+E DL EI+ ++K + +V+FA PDP+E + D+ Sbjct: 330 KGKFATEDDLAEIDKEIKKTVEEAVKFADESPYPDPSEAFKDVY 373 >gi|329850654|ref|ZP_08265499.1| pyruvate dehydrogenase acetyl-transferring E1 component, alpha subunit [Asticcacaulis biprosthecum C19] gi|328840969|gb|EGF90540.1| pyruvate dehydrogenase acetyl-transferring E1 component, alpha subunit [Asticcacaulis biprosthecum C19] Length = 335 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 196/323 (60%), Positives = 251/323 (77%), Gaps = 1/323 (0%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G ++S +K++ L YR M+LIRRFEE+AGQLYGMG++GGFCHL IGQEAV VGM+ + Sbjct: 11 GKKLSNVSKDELLKYYREMVLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVAVGMEAASK 70 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 +GDQ+IT YR+HGH+LA G+D +MAELTGR GG SKGKGGSMHMF GFYGGHGIV Sbjct: 71 DGDQVITGYRDHGHMLAAGMDPKAVMAELTGRAGGSSKGKGGSMHMFDIATGFYGGHGIV 130 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AF++ YR++ + FGDGAANQGQVYESFN+A LW L V+YVIENN+Y Sbjct: 131 GAQVSLGTGLAFSDYYRQNGNVSFTYFGDGAANQGQVYESFNMAQLWKLPVVYVIENNEY 190 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS++RASA N S+RG SF IPG VDGMD+ AVK ++A + R+ KGP I+EM Sbjct: 191 AMGTSLARASATVNLSQRGASFGIPGETVDGMDVFAVKDAAERAAEHARSGKGPYILEMK 250 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYRYRGHSMSDPA YR++EE+ E+++ DPI+ ++ L A E ++K I+ +V+ I+ Sbjct: 251 TYRYRGHSMSDPAKYRSKEEVEEVKTTRDPIDHIKTMLQQAGVA-EDEIKAIDADVKAIV 309 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 +VEFAQ+ EPDP+EL++DI Sbjct: 310 LEAVEFAQTSPEPDPSELFTDIY 332 >gi|209156128|gb|ACI34296.1| Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor [Salmo salar] Length = 393 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 179/357 (50%), Positives = 238/357 (66%), Gaps = 7/357 (1%) Query: 10 VGDIKMALNPSVSAKRAATSSVDCVDIPFLE--GFEVSEFNKEQELSAYRLMLLIRRFEE 67 + +A AT + VD+ LE + +EQ L YR M IRR E Sbjct: 20 AASLVVASRSYADFTPEATFDIKKVDLHRLEEGPPLTATLTREQGLKYYRTMQTIRRMEL 79 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 KA QLY ++ GFCHL GQEA VG++ +T D +ITAYR HG+ L G +IMA Sbjct: 80 KADQLYKQKIIRGFCHLYDGQEACAVGIEGGITLSDHLITAYRAHGYTLTRGGTIREIMA 139 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 ELTGR+GGI+KGKGGSMHM++ FYGG+GIVGAQV LG G+A A KY +D++CV + Sbjct: 140 ELTGRRGGIAKGKGGSMHMYTK--NFYGGNGIVGAQVPLGAGVALACKYLGNDQLCVSLY 197 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGAANQGQ++E++N+++LW L +I++ ENNQYAMGTSV R++A T + KRG IPG+ Sbjct: 198 GDGAANQGQIFETYNMSSLWKLPIIFICENNQYAMGTSVERSAASTEYYKRGDY--IPGI 255 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRS 306 +VDGMD+ V+ A +CR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS Sbjct: 256 RVDGMDVLCVREATKFAADHCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRS 315 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DPI ++ R+L N AS +LKEI++ VRK I ++ +FA +D EP +L S I Sbjct: 316 KSDPISMLKDRMLSNNMASIEELKEIDIAVRKEIEDAAQFATTDPEPPLDDLCSHIF 372 >gi|297673997|ref|XP_002815025.1| PREDICTED: LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial-like [Pongo abelii] Length = 441 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 174/361 (48%), Positives = 235/361 (65%), Gaps = 7/361 (1%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIR 63 + V + L S ++ AT + D+ LE G V+ + + L YR+ML +R Sbjct: 64 RRVAQKSARRVLVASRNSSNDATFEIKKCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVR 123 Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 R E KA QLY + GFCHLC GQEA VG++ + D +IT+YR HG G+ Sbjct: 124 RMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVR 183 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I+AELTGR+GG +KGKGGSMHM++ FYGG+GIVGAQ LG GIA A KY+ +D+IC Sbjct: 184 SILAELTGRRGGCAKGKGGSMHMYTK--NFYGGNGIVGAQGPLGAGIALACKYKGNDEIC 241 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + +GDGAANQGQ+ E+FN+AALW L +++ ENN Y MGTS RA+A ++ KRG Sbjct: 242 LTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAAIPDYYKRGNF-- 299 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEIN 302 IPG++VDGMD+ V+ A YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI Sbjct: 300 IPGLKVDGMDVLCVRDATKFAADYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQ 359 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 E+RS DPI ++ R++++K A+ +LKEI VRK I+++ +FA +D EP EL I Sbjct: 360 EVRSKRDPIMILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLEELGHHI 419 Query: 363 L 363 Sbjct: 420 Y 420 >gi|168184719|ref|ZP_02619383.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum Bf] gi|237794971|ref|YP_002862523.1| TPP-dependent acetoin dehydrogenase complex, E1 component subunit alpha [Clostridium botulinum Ba4 str. 657] gi|182672210|gb|EDT84171.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum Bf] gi|229261745|gb|ACQ52778.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum Ba4 str. 657] Length = 327 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 126/320 (39%), Positives = 189/320 (59%), Gaps = 1/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + N+ + Y+ ML IR+FE+ A + G + GF HL IG+EAV G+ +L + D Sbjct: 1 MKKLNENSIVEMYKTMLKIRKFEQVAMNTFAEGKIPGFVHLYIGEEAVATGVCANLKDSD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGHILA G D +MAEL G+ G KGKGGSMH+ G G +GIVGA Sbjct: 61 YITSTHRGHGHILAKGGDLKFMMAELFGKVTGYCKGKGGSMHIADATKGILGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 ++ G + +YR +D++CV FGD + NQG +ES N+A++W L V++V ENN Y + Sbjct: 121 HNIAVGAGLSAQYRGTDQVCVCFFGDASTNQGTFHESLNMASVWKLPVVFVCENNLYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S +R A + + RGV++N+PG+ VDG D+ AV +A+ R KGP +IE TYR Sbjct: 181 MSQNRHQAIKDVADRGVAYNVPGIVVDGNDVFAVYEAAKEAIKRAREGKGPTLIECKTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGH DP Y+ E E + DPI + K L+ N+ +E +LKE++ V I+ + Sbjct: 241 HRGHFEGDPCVYKPTAEQEEWLAK-DPIPRFEKYLVENEILTEEELKEVQNKVEGEIDEA 299 Query: 344 VEFAQSDKEPDPAELYSDIL 363 V+FA + P+ + D+ Sbjct: 300 VDFANNSPYPELESVLEDVY 319 >gi|255530087|ref|YP_003090459.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Pedobacter heparinus DSM 2366] gi|255343071|gb|ACU02397.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Pedobacter heparinus DSM 2366] Length = 331 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 169/319 (52%), Positives = 223/319 (69%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E NK+ L + MLL+R+FEEK GQLYG + GFCHL IGQEAV+ G ++ +GD M Sbjct: 5 EINKDTYLKWFESMLLMRKFEEKTGQLYGQQKIRGFCHLYIGQEAVVAGAISAMQQGDSM 64 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT YR+H H LA GV A IMAE+ G+ G+SKGKGGSMHMFS + FYGGH IVG Q+ Sbjct: 65 ITTYRDHAHALALGVSADSIMAEMYGKATGVSKGKGGSMHMFSKAHHFYGGHAIVGGQIP 124 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY+ +D + + GDGA QG + E+FN+A LW L V++V ENN YAMGTS Sbjct: 125 LGAGIAFAEKYKGTDNVNICYMGDGAVRQGALNEAFNMAMLWKLPVVFVCENNFYAMGTS 184 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R + T+ K G+ F++P VDGMD AV MD+A+ RA +GP +EM TYRYR Sbjct: 185 VERTTNMTDIYKIGLGFDMPCAPVDGMDPVAVHNAMDEAIQRARAGEGPTFLEMRTYRYR 244 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YRT++E+ E ++ DPIE VR+ +L K+A + ++EIE V++I++ SV+ Sbjct: 245 GHSMSDPAKYRTKDELEEYKAK-DPIETVREVILKEKYADQAWIEEIENKVKEIVDQSVK 303 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ PD +ELY+D+ + Sbjct: 304 FAEESPWPDASELYTDVYV 322 >gi|296535285|ref|ZP_06897491.1| pyruvate dehydrogenase complex E1 component alpha subunit [Roseomonas cervicalis ATCC 49957] gi|296264379|gb|EFH10798.1| pyruvate dehydrogenase complex E1 component alpha subunit [Roseomonas cervicalis ATCC 49957] Length = 345 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 203/318 (63%), Positives = 252/318 (79%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++EQ L AYR MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV+VGM+M L GDQ+I Sbjct: 26 LSQEQMLQAYRDMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVVGMQMCLMPGDQVI 85 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HGH+LA G++A +MAELTGR GG SKGKGGSMHMFS + GF+GGHGIVGAQVSL Sbjct: 86 TSYRDHGHMLATGMEARGVMAELTGRAGGYSKGKGGSMHMFSREKGFFGGHGIVGAQVSL 145 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AFAN Y + +C+ +GDGAANQGQV+ES+N+AAL+ L V+++IENN+Y MGTS Sbjct: 146 GAGLAFANMYNDNGNVCLTYYGDGAANQGQVFESYNLAALFKLPVVFIIENNKYGMGTSA 205 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA + SK G + IPG QVDGMD+ AVKA ++AVA+CR KGP I+EM TYRYRG Sbjct: 206 DRASASKDRSKDGTPWGIPGEQVDGMDVEAVKAAGERAVAHCREGKGPYILEMKTYRYRG 265 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTREE+ +MR HD IE RKRLL E LK ++ V++I+ +S EF Sbjct: 266 HSMSDPAKYRTREEVQKMREQHDCIETARKRLLEGGL-PEDALKTVDDEVKRIVADSAEF 324 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ EPD +EL++D+L+ Sbjct: 325 AQTSPEPDESELWTDVLL 342 >gi|168180286|ref|ZP_02614950.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum NCTC 2916] gi|182668764|gb|EDT80742.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum NCTC 2916] Length = 327 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 127/320 (39%), Positives = 189/320 (59%), Gaps = 1/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + N+ + Y+ ML IR+FE+ A + G + GF HL IG+EAV G+ +L + D Sbjct: 1 MKKLNENSIVEMYKTMLKIRKFEQVAMNTFAEGKIPGFVHLYIGEEAVATGVCANLKDSD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGHILA G D +MAEL G+ G KGKGGSMH+ G G +GIVGA Sbjct: 61 YITSTHRGHGHILAKGGDLKFMMAELFGKATGYCKGKGGSMHIADATKGILGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 ++ G + +YR +D++CV FGD + NQG +ES N+A++W L V++V ENN Y + Sbjct: 121 HNIAVGAGLSAQYRETDQVCVCFFGDASTNQGTFHESLNMASVWKLPVVFVCENNLYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S +R A + + RGV++N+PG+ VDG D+ AV +A+ R KGP +IE TYR Sbjct: 181 MSQNRHQAIKDVADRGVAYNVPGIVVDGNDVFAVYEAAKEAIKRAREGKGPTLIECKTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGH DP Y+ EE E + DPI + K L+ N+ +E LKE++ V I+ + Sbjct: 241 HRGHFEGDPCVYKPTEEQEEWLAK-DPIPRFEKYLVENEILTEEKLKEVQNKVESQIDEA 299 Query: 344 VEFAQSDKEPDPAELYSDIL 363 V+FA + P+ + D+ Sbjct: 300 VDFANNSPYPELESVLEDVY 319 >gi|53749653|ref|NP_998558.1| pyruvate dehydrogenase E1 alpha 1 [Danio rerio] gi|38511984|gb|AAH60928.1| Pdha1 protein [Danio rerio] gi|47940364|gb|AAH71373.1| Pyruvate dehydrogenase (lipoamide) alpha 1 [Danio rerio] gi|169145943|emb|CAQ14602.1| novel protein (zgc:73271) [Danio rerio] Length = 393 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 172/344 (50%), Positives = 232/344 (67%), Gaps = 7/344 (2%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSE--FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + D+ LE + +E+ L YR M +RR E KA QLY ++ G Sbjct: 33 FTPQATFDIKKCDVHKLEEGPAVQAVLTREEGLQYYRTMQTMRRMELKADQLYKQKIIRG 92 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VG++ + D +ITAYR HG+ L G +IMAELTGR+GGI+KGK Sbjct: 93 FCHLYDGQEACAVGIEAGINLSDHLITAYRAHGYTLTRGGTVREIMAELTGRRGGIAKGK 152 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM++ FYGG+GIVGAQV LG G+A A KY+ +++CV +GDGAANQGQ++E+ Sbjct: 153 GGSMHMYTK--HFYGGNGIVGAQVPLGAGVALACKYQGKNELCVCLYGDGAANQGQIFET 210 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A+LW L I++ ENN+Y MGTSV RA+A T++ KRG IPG++VDGMD+ V+ Sbjct: 211 YNMASLWKLPCIFICENNKYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDVLCVREA 268 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 A +CR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R+L Sbjct: 269 TKFAAEHCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPISLLKDRML 328 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 N AS +LKEI++ VRK I ++ +FA +D EP +L + I Sbjct: 329 SNNMASVEELKEIDVEVRKEIEDAAQFATTDPEPPLEDLCNHIF 372 >gi|124430510|ref|NP_001004072.2| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor [Rattus norvegicus] gi|71051030|gb|AAH98897.1| Pyruvate dehydrogenase (lipoamide) alpha 1 [Rattus norvegicus] gi|149042441|gb|EDL96148.1| rCG36458 [Rattus norvegicus] Length = 390 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 182/370 (49%), Positives = 240/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKR----AATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G + + + A R AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLAGAAQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 124 TFTRGLPVRAILAELTGRRGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 181 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 182 KYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 241 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP Sbjct: 242 YYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGV 299 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 Query: 354 DPAELYSDIL 363 EL I Sbjct: 360 PLEELGYHIY 369 >gi|226948957|ref|YP_002804048.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A2 str. Kyoto] gi|226842893|gb|ACO85559.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum A2 str. Kyoto] Length = 327 Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats. Identities = 126/320 (39%), Positives = 189/320 (59%), Gaps = 1/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + N+ + Y+ ML IR+FE+ A + G + GF HL IG+EAV G+ +L + D Sbjct: 1 MKKLNENSIVEMYKTMLKIRKFEQVAMNTFAEGKIPGFVHLYIGEEAVATGVCANLKDSD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGHILA G D +MAEL G+ G KGKGGSMH+ G G +GIVGA Sbjct: 61 YITSTHRGHGHILAKGGDLKFMMAELFGKATGYCKGKGGSMHIADATKGILGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 ++ G + +YR +D++CV FGD + NQG +ES N+A++W L V++V ENN Y + Sbjct: 121 HNIAVGAGLSAQYRGTDQVCVCFFGDASTNQGTFHESLNMASVWKLPVVFVCENNLYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S +R A + + RGV++N+PG+ VDG D+ AV +A+ R KGP +IE TYR Sbjct: 181 MSQNRHQAIKDVADRGVAYNVPGIVVDGNDVFAVYEAAKEAIKRAREGKGPTLIECKTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGH DP Y+ EE E + DPI + K L+ N+ +E LK+++ V I+ + Sbjct: 241 HRGHFEGDPCVYKPTEEQEEWLAK-DPIPRFEKYLVENEILTEEKLKKVQNKVESQIDEA 299 Query: 344 VEFAQSDKEPDPAELYSDIL 363 V+FA + P+ + D+ Sbjct: 300 VDFANNSPYPELESVLEDVY 319 >gi|155371825|ref|NP_001094516.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor [Bos taurus] gi|182667934|sp|A7MB35|ODPA_BOVIN RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor gi|154426034|gb|AAI51314.1| PDHA1 protein [Bos taurus] gi|296470516|gb|DAA12631.1| pyruvate dehydrogenase E1 alpha 1 precursor [Bos taurus] Length = 390 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 182/370 (49%), Positives = 238/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVG----DIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G L S AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLSGVAQKPASRVLVASRHFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 124 TFTRGLSVREILAELTGRRGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 181 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 182 KYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 241 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP Sbjct: 242 YYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGV 299 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 Query: 354 DPAELYSDIL 363 EL I Sbjct: 360 PLEELGYHIY 369 >gi|58579456|ref|YP_197668.1| pyruvate dehydrogenase E1 component, alpha subunit [Ehrlichia ruminantium str. Welgevonden] gi|58418082|emb|CAI27286.1| Pyruvate dehydrogenase E1 component, alpha subunit [Ehrlichia ruminantium str. Welgevonden] Length = 328 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 177/318 (55%), Positives = 232/318 (72%), Gaps = 1/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 K+Q ++ Y MLLIRRFEEK+GQLYGMG++GGFCHL IGQEA+ VG++ S+ EGD + Sbjct: 8 NLTKQQLINCYHDMLLIRRFEEKSGQLYGMGLIGGFCHLYIGQEAIAVGIQHSIIEGDSI 67 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT+YR+HG + +MAEL G+ G S GKGGSMHMF+ + F+GGHGIVGAQV Sbjct: 68 ITSYRDHGLCFFW-YRSKYVMAELMGKSTGCSGGKGGSMHMFNIEKQFFGGHGIVGAQVP 126 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +GTGIA ANKY++++ + CFGDGA NQGQVYE+FN+AALW L V+YVIENN+YAMGTS Sbjct: 127 IGTGIALANKYKKNNNVVFTCFGDGATNQGQVYEAFNMAALWKLPVVYVIENNEYAMGTS 186 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 VSR+S T+ K+G SF IPG Q+DGMD+ AV A AYCR GPI++EM TYRYR Sbjct: 187 VSRSSYITDLYKKGESFGIPGYQIDGMDLFAVIKAATDAAAYCREQNGPILLEMKTYRYR 246 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YR++EE+ +++ DP+ ++ ++ NK SE D + + +R I+ SVE Sbjct: 247 GHSMSDPAKYRSKEEVEKVKEEKDPLINLKNYMISNKIISEEDCNKYDKEIRNIVKESVE 306 Query: 346 FAQSDKEPDPAELYSDIL 363 F+Q+ EP LY+D+ Sbjct: 307 FSQNSSEPAVNTLYTDVY 324 >gi|116004359|ref|NP_001070539.1| pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial [Bos taurus] gi|83406095|gb|AAI11210.1| Pyruvate dehydrogenase (lipoamide) alpha 2 [Bos taurus] gi|296486706|gb|DAA28819.1| pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial [Bos taurus] Length = 391 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 175/359 (48%), Positives = 235/359 (65%), Gaps = 7/359 (1%) Query: 8 VTVGDIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRF 65 VT L S AT + D+ LE G V+ +E L Y++M IRR Sbjct: 16 VTQKPASRVLVASCKYSNNATFEIKKCDLYRLEEGPPVTTVLTREDGLKYYKMMQTIRRM 75 Query: 66 EEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKI 125 E KA QLY + GFCHLC GQEA VG++ + D +IT+YR HG G+ I Sbjct: 76 ELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPTDHVITSYRAHGLSYTRGLTVRSI 135 Query: 126 MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVV 185 +AELTGR+ G +KGKGGSMHM+ FYGG+GIVGAQ LG G+A A KY+ ++++C+ Sbjct: 136 LAELTGRRAGCAKGKGGSMHMY--AKNFYGGNGIVGAQGPLGAGVALACKYKGNNEVCLT 193 Query: 186 CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIP 245 +GDGAANQGQ+ E++N+AALWNL I++ ENN+Y MGTSV RA+A T++ KRG IP Sbjct: 194 LYGDGAANQGQISEAYNMAALWNLPCIFICENNRYGMGTSVDRAAASTDYYKRGNF--IP 251 Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEM 304 G++VDGMDI V+ A YCR+ KGPI++E+LTYRY GHSMSDP +YRTREEI + Sbjct: 252 GLRVDGMDILCVREATKFAADYCRSGKGPILMELLTYRYHGHSMSDPGISYRTREEIQSV 311 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 RS DPI ++ ++++N+ AS +LKEI++ VRK I+++ +FA +D EP EL I Sbjct: 312 RSKSDPIMLLKDKMVNNQLASVEELKEIDVEVRKEIDDAAQFAMTDPEPPLEELGHHIY 370 >gi|301756280|ref|XP_002914000.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like [Ailuropoda melanoleuca] Length = 380 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 179/366 (48%), Positives = 240/366 (65%), Gaps = 10/366 (2%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRL 58 M + T + +A S + AT + D+ LE G V+ +E L YR+ Sbjct: 1 MKSCARSRTASRVLVA---SRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLRYYRM 57 Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 58 MQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTR 117 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G+ +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A KY Sbjct: 118 GLSVREILAELTGRRGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALACKYNG 175 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KR Sbjct: 176 KDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKR 235 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRT 297 G IPG++VDGMDI V+ A A+CR+ KGPI++E+ TYRY GHSMSDP +YRT Sbjct: 236 GDF--IPGLRVDGMDILCVREATRFAAAHCRSGKGPILMELQTYRYHGHSMSDPGVSYRT 293 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 REEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP E Sbjct: 294 REEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEE 353 Query: 358 LYSDIL 363 L I Sbjct: 354 LGYHIY 359 >gi|289522566|ref|ZP_06439420.1| pyruvate dehydrogenase E1 component, alpha subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504402|gb|EFD25566.1| pyruvate dehydrogenase E1 component, alpha subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 319 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 122/317 (38%), Positives = 180/317 (56%), Gaps = 1/317 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E YR ML IR FEE+ +L+ G GF HL +G+EAV G +L + D + Sbjct: 3 IERETLQWMYRNMLTIRYFEERVAELFAAGKCFGFVHLYVGEEAVATGACANLRKDDYIT 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH+++ G D +MAEL GR+ G KGKGGSMH+ + G G +GIVG + Sbjct: 63 STHRGHGHLISKGGDLKLMMAELFGRRTGYCKGKGGSMHIADVELGILGANGIVGGGFPI 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G F KY+ +D + FGDG++NQG +E+ N+A++W L VI++ ENN Y + S Sbjct: 123 AVGAGFTAKYKGTDHVAACFFGDGSSNQGTFHEALNMASIWKLPVIFINENNFYGISLSQ 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+ + + R ++NIPG+ VDG D+ AV + +AV RA +GP +IE TYRYRG Sbjct: 183 RRSMNVPDVAARAAAYNIPGVVVDGNDVLAVYEAVQEAVKRARAGEGPTLIECKTYRYRG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H DP YR EE+ E DPI + ++L +E +K++ + I +V+F Sbjct: 243 HFEGDPTVYRPEEEVQEW-KKKDPIPRFEEKLAQMGIMTEEQMKQVREEIASKIEEAVKF 301 Query: 347 AQSDKEPDPAELYSDIL 363 A+ P P E+ D+ Sbjct: 302 AEESPWPSPEEVLEDVY 318 >gi|304321329|ref|YP_003854972.1| Pyruvate dehydrogenase E1 component subunit alpha [Parvularcula bermudensis HTCC2503] gi|303300231|gb|ADM09830.1| Pyruvate dehydrogenase E1 component, alpha subunit [Parvularcula bermudensis HTCC2503] Length = 327 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 194/317 (61%), Positives = 244/317 (76%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +Q L YR+MLLIRRFEE+AGQLYGMG +GGFCHL IGQEAV+ G++ EGDQ+ Sbjct: 9 TISGDQLLEDYRMMLLIRRFEERAGQLYGMGHIGGFCHLYIGQEAVVTGLEALREEGDQV 68 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT YR+HGH+LACG+D +MAELTGR GG SKGKGGSMHMFST FYGGHGIVGAQV Sbjct: 69 ITGYRDHGHMLACGMDPKGVMAELTGRDGGYSKGKGGSMHMFSTDKAFYGGHGIVGAQVP 128 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G GIAFANKYR++D +C FGDGAANQGQV+E+ N+A LW+L V++VIENNQYAMGT+ Sbjct: 129 IGAGIAFANKYRKNDNVCFTYFGDGAANQGQVFEAMNMAELWDLPVVFVIENNQYAMGTA 188 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V RASA T+ +RG SF IPG +VDGMD+ AV+ +AV + R GP ++EM TYRYR Sbjct: 189 VKRASADTHLCRRGASFGIPGKEVDGMDVVAVRQEAKEAVDHARNGGGPYVLEMKTYRYR 248 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YRTR+E+++MR++ DPIE+ +KRLL ++A E LK I+ ++ I + + Sbjct: 249 GHSMSDPAKYRTRQEVDDMRTHSDPIERCKKRLLDGEYADEETLKSIDTEIKAQIKEAAD 308 Query: 346 FAQSDKEPDPAELYSDI 362 FA EP ELY+D+ Sbjct: 309 FALESPEPASKELYTDV 325 >gi|67459412|ref|YP_247036.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia felis URRWXCal2] gi|75536172|sp|Q4UKQ6|ODPA_RICFE RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|67004945|gb|AAY61871.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia felis URRWXCal2] Length = 326 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 169/316 (53%), Positives = 228/316 (72%), Gaps = 1/316 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + +GD IT Sbjct: 11 TKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDTVKQKGDSTIT 70 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+H HI+ G + ++AEL GR G SKGKGGSMH+F N FYGGHGIVGAQV +G Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKFYGGHGIVGAQVPIG 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA KY ++ IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+ Sbjct: 131 TGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVA 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++ + K+G SF I G Q+DGMD + +A Y R + P+I+E+ TYRYRGH Sbjct: 191 RSTFMRDLYKKGESFGIKGFQLDGMDFEEMYNGAKQAAEYVRENSFPLILEVKTYRYRGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR++EE+ + DP+ +RK +L NK+A+E DLKEIE +V++I+ +V+F+ Sbjct: 251 SMSDPAKYRSKEEVEQY-KERDPLVIIRKTILDNKYATEADLKEIEQSVKEIVKEAVKFS 309 Query: 348 QSDKEPDPAELYSDIL 363 ++ PD ELY+++ Sbjct: 310 ENSPLPDEGELYTEVY 325 >gi|15892270|ref|NP_359984.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia conorii str. Malish 7] gi|32129822|sp|Q92IS3|ODPA_RICCN RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|15619410|gb|AAL02885.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia conorii str. Malish 7] Length = 326 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 168/316 (53%), Positives = 225/316 (71%), Gaps = 1/316 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M +GD IT Sbjct: 11 TKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAIDMVKQKGDSTIT 70 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+H HI+ G + ++AEL GR G SKGKGGSMH+F+ N FYGGHGIVGAQV +G Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFNVPNKFYGGHGIVGAQVPIG 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AF KY + IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+ Sbjct: 131 TGLAFVEKYNDTHNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVA 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++ + K+G SF I G Q+DGMD + +A Y R + P+I+E+ TYRYRGH Sbjct: 191 RSTFMRDLYKKGASFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR++EE+ + DP+ +RK +L NK+ +E DLK IE +V++I+ +VEF+ Sbjct: 251 SMSDPAKYRSKEEVEQY-KERDPLVIIRKTILDNKYVTEADLKAIEQSVKEIVKEAVEFS 309 Query: 348 QSDKEPDPAELYSDIL 363 ++ PD ELY+ + Sbjct: 310 ENSPLPDEGELYTQVY 325 >gi|326390548|ref|ZP_08212104.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter ethanolicus JW 200] gi|325993373|gb|EGD51809.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter ethanolicus JW 200] Length = 328 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 124/318 (38%), Positives = 186/318 (58%), Gaps = 1/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +++ L Y M+ IR+FEEK +L+ G V GF HL IG+EA VG+ +L + D + Sbjct: 2 EISRDVLLDMYTRMVKIRKFEEKVAELFAQGKVLGFVHLYIGEEATAVGVCENLEDKDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH++A G D +MAEL G++ G KGKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHLIAKGGDLKYMMAELYGKETGYCKGKGGSMHIADATKGILGANGIVGGGFP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A + K R +D++ V FGDGA+NQ +E+ NIA++W L V++V ENN Y + Sbjct: 122 IAAGAALSAKMRGTDQVTVCFFGDGASNQSTFHEALNIASIWKLPVVFVCENNLYGISMR 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + A + + R + + IPG+ VDG D+ AV +A+ R+ GP ++E TYRYR Sbjct: 182 QDKHQAIKDVADRAIGYGIPGVTVDGNDVLAVYEVAKEAINRARSGAGPTLVECKTYRYR 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR++EE+ E + DPI ++ K +L N A+E +LK+IE + + + +V Sbjct: 242 GHFEGDPTIYRSKEEVEEWLAK-DPILRLSKHILDNDVATEKELKDIEARIVEEVEEAVR 300 Query: 346 FAQSDKEPDPAELYSDIL 363 FA+ P D+ Sbjct: 301 FAEESPYPKEEAAVEDVY 318 >gi|167037205|ref|YP_001664783.1| pyruvate dehydrogenase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256751306|ref|ZP_05492186.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter ethanolicus CCSD1] gi|307266666|ref|ZP_07548195.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter wiegelii Rt8.B1] gi|320115624|ref|YP_004185783.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856039|gb|ABY94447.1| Pyruvate dehydrogenase (acetyl-transferring) [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749861|gb|EEU62885.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter ethanolicus CCSD1] gi|306918329|gb|EFN48574.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter wiegelii Rt8.B1] gi|319928715|gb|ADV79400.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 328 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 124/318 (38%), Positives = 186/318 (58%), Gaps = 1/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +++ L Y M+ IR+FEEK +L+ G V GF HL IG+EA VG+ +L + D + Sbjct: 2 EISRDVLLDMYTRMVKIRKFEEKVAELFAQGKVLGFVHLYIGEEATAVGVCENLEDKDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH++A G D +MAEL G++ G KGKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHLIAKGGDLKYMMAELYGKETGYCKGKGGSMHIADATKGILGANGIVGGGFP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A + K R +D++ V FGDGA+NQ +E+ NIA++W L V++V ENN Y + Sbjct: 122 IAAGAALSAKMRGTDQVAVCFFGDGASNQSTFHEALNIASIWKLPVVFVCENNLYGISMR 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + A + + R + + IPG+ VDG D+ AV +A+ R+ GP ++E TYRYR Sbjct: 182 QDKHQAIKDVADRAIGYGIPGVTVDGNDVLAVYEVAKEAINRARSGAGPTLVECKTYRYR 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR++EE+ E + DPI ++ K +L N A+E +LK+IE + + + +V Sbjct: 242 GHFEGDPTIYRSKEEVEEWLAK-DPILRLSKHILDNDVATEKELKDIEARIVEEVEEAVR 300 Query: 346 FAQSDKEPDPAELYSDIL 363 FA+ P D+ Sbjct: 301 FAEESPYPKEEAAVEDVY 318 >gi|223648696|gb|ACN11106.1| Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor [Salmo salar] Length = 400 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 177/344 (51%), Positives = 234/344 (68%), Gaps = 7/344 (2%) Query: 23 AKRAATSSVDCVDIPFLE--GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + VD+ LE + +E+ L YR M IRR E KA QLY ++ G Sbjct: 40 FTPEATFDIKKVDLHRLEEGPPLTATLTREEGLKYYRTMQTIRRMELKADQLYKQKIIRG 99 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VG++ +T D +ITAYR HG+ L G +IMAELTGR+GGI+KGK Sbjct: 100 FCHLYDGQEACAVGIEGGITLSDHLITAYRAHGYTLTRGGTVREIMAELTGRRGGIAKGK 159 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM++ FYGG+GIVGAQV LG G+A A KY +D++CV +GDGAANQGQ++E+ Sbjct: 160 GGSMHMYTK--NFYGGNGIVGAQVPLGAGVALACKYLGNDQLCVSLYGDGAANQGQIFET 217 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+++LW L +I++ ENNQY MGTSV R+SA T + KRG IPG++VDGMD+ V+ Sbjct: 218 YNMSSLWKLPIIFICENNQYGMGTSVERSSASTEYYKRGDY--IPGLRVDGMDVLCVREA 275 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 A +CR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R+L Sbjct: 276 TKFAADHCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPISMLKDRML 335 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 N AS +LKEI++ VRK I ++ +FA +D EP +L S I Sbjct: 336 SNNMASIDELKEIDIAVRKEIEDAAQFATTDPEPPLDDLCSHIF 379 >gi|167040656|ref|YP_001663641.1| pyruvate dehydrogenase [Thermoanaerobacter sp. X514] gi|300914697|ref|ZP_07132013.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter sp. X561] gi|307724069|ref|YP_003903820.1| pyruvate dehydrogenase E1 component subunit alpha [Thermoanaerobacter sp. X513] gi|166854896|gb|ABY93305.1| Pyruvate dehydrogenase (acetyl-transferring) [Thermoanaerobacter sp. X514] gi|300889632|gb|EFK84778.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter sp. X561] gi|307581130|gb|ADN54529.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Thermoanaerobacter sp. X513] Length = 328 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 124/318 (38%), Positives = 186/318 (58%), Gaps = 1/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +++ L Y M+ IR+FEEK +L+ G V GF HL IG+EA VG+ +L + D + Sbjct: 2 EISRDILLDMYTRMVKIRKFEEKVAELFAQGKVLGFVHLYIGEEATAVGVCENLEDKDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH++A G D +MAEL G++ G KGKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHLIAKGGDLKYMMAELYGKETGYCKGKGGSMHIADATKGILGANGIVGGGFP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A + K R +D++ V FGDGA+NQ +E+ NIA++W L V++V ENN Y + Sbjct: 122 IAAGAALSAKMRGTDQVAVCFFGDGASNQSTFHEALNIASIWKLPVVFVCENNLYGISMR 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + A + + R + + IPG+ VDG D+ AV +A+ R+ GP ++E TYRYR Sbjct: 182 QDKHQAIKDVADRAIGYGIPGVTVDGNDVLAVYEVAKEAINRARSGAGPTLVECKTYRYR 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR++EE+ E + DPI ++ K +L N A+E +LK+IE + + + +V Sbjct: 242 GHFEGDPTIYRSKEEVEEWLAK-DPILRLSKHILDNDVATEKELKDIEARIVEEVEEAVR 300 Query: 346 FAQSDKEPDPAELYSDIL 363 FA+ P D+ Sbjct: 301 FAEESPYPKEEAAVEDVY 318 >gi|115377722|ref|ZP_01464914.1| pyruvate dehydrogenase E1 component, alpha subunit [Stigmatella aurantiaca DW4/3-1] gi|115365272|gb|EAU64315.1| pyruvate dehydrogenase E1 component, alpha subunit [Stigmatella aurantiaca DW4/3-1] Length = 373 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 159/321 (49%), Positives = 216/321 (67%), Gaps = 1/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 S ++KE L+ YR M LIRRFEE+AGQ YG+G + GFCHL IGQEA VG ++ D Sbjct: 2 ASPYSKELLLTMYRKMYLIRRFEERAGQQYGLGKIAGFCHLYIGQEATAVGAIEAIRPDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M++AYR+HG LA G DA +MAEL GR G SKGKGGSMH+F ++ FYGG+GIVG Q Sbjct: 62 YMLSAYRDHGQPLARGADAGMVMAELFGRGTGYSKGKGGSMHIFDIEHHFYGGYGIVGGQ 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + L G+AFA++YR D++ V FGD AANQG +E+ N+A+ W L VIY+ ENN+Y MG Sbjct: 122 IPLAAGMAFASRYRNEDRVTVCYFGDAAANQGAFHETLNMASKWKLPVIYICENNRYGMG 181 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+V R SA KR V++++ G VDGMD + T+ A YCRA KGP+++E TYR Sbjct: 182 TAVGRTSAVPEMYKRAVAYDMRGEPVDGMDCLKMYETVKDAAEYCRAGKGPVLLEANTYR 241 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGHSM+DPA YR+++E+ E R N DPI +++ L K A E + I+ V+ ++ + Sbjct: 242 FRGHSMADPATYRSKQEVEEERKN-DPIPKIKDYTLKKKLAKEEEFDAIDEEVKAQVDAA 300 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V+FA EP EL+ D ++ Sbjct: 301 VKFADESPEPSLEELWRDTIV 321 >gi|57657|emb|CAA78146.1| pyruvate dehydrogenase E1 alpha form 1 subunit [Rattus rattus] Length = 390 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 182/370 (49%), Positives = 240/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKR----AATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G + + + A R AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSHVLAGAAQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 124 TFTRGLPVRAILAELTGRRGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 181 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 182 KYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 241 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP Sbjct: 242 YYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGV 299 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 Query: 354 DPAELYSDIL 363 EL I Sbjct: 360 PLEELGYHIY 369 >gi|34580715|ref|ZP_00142195.1| pyruvate dehydrogenase e1 component alpha subunit precursor [Rickettsia sibirica 246] gi|238650486|ref|YP_002916338.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia peacockii str. Rustic] gi|28262100|gb|EAA25604.1| pyruvate dehydrogenase e1 component alpha subunit precursor [Rickettsia sibirica 246] gi|238624584|gb|ACR47290.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia peacockii str. Rustic] Length = 326 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 169/316 (53%), Positives = 226/316 (71%), Gaps = 1/316 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M +GD IT Sbjct: 11 TKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDMVKQKGDSTIT 70 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+H HI+ G + ++AEL GR G SKGKGGSMH+F+ N FYGGHGIVGAQV +G Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFNVPNKFYGGHGIVGAQVPIG 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA KY + IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+ Sbjct: 131 TGLAFAEKYNDTHNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVA 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++ + K+G SF I G Q+DGMD + +A Y R + P+I+E+ TYRYRGH Sbjct: 191 RSTFMRDLYKKGASFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR++EE+ + DP+ +RK +L NK+ +E DLK IE +V++I+ +VEF+ Sbjct: 251 SMSDPAKYRSKEEVEQY-KERDPLVIIRKTILDNKYVTEADLKAIEQSVKEIVKEAVEFS 309 Query: 348 QSDKEPDPAELYSDIL 363 ++ PD ELY+ + Sbjct: 310 ENSPLPDEGELYTQVY 325 >gi|50539866|ref|NP_001002399.1| pyruvate dehydrogenase E1 alpha 1 [Danio rerio] gi|49901091|gb|AAH76185.1| Zgc:92705 [Danio rerio] Length = 393 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 171/344 (49%), Positives = 231/344 (67%), Gaps = 7/344 (2%) Query: 23 AKRAATSSVDCVDIPFL-EGFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 A + D+ L EG V +E L YR+M +RR E KA QLY ++ G Sbjct: 33 FTPQANFDIKRCDLHRLDEGPSVQTVLTREDGLKYYRMMQTMRRMELKADQLYKQKIIRG 92 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VG++ + D +ITAYR HG+ GV +IMAELTGR+GG++KGK Sbjct: 93 FCHLYDGQEACAVGIEAGIKPTDHLITAYRAHGYTYTRGVSVKEIMAELTGRRGGVAKGK 152 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+ FYGG+GIVGAQV LG G+A A +Y+ +++ICV +GDGAANQGQ++ES Sbjct: 153 GGSMHMY--AKNFYGGNGIVGAQVPLGAGVALACQYQGNNEICVTLYGDGAANQGQIFES 210 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 FN+AALW L I++ ENN+Y MGTSV RASA T++ KRG IPG++VDGMD+ V+ Sbjct: 211 FNMAALWKLPCIFICENNKYGMGTSVERASASTDYYKRGDF--IPGLRVDGMDVLGVREA 268 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 A YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++ Sbjct: 269 TKFAADYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPITTLKDRMI 328 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + AS ++K+I+ ++RK + + +FA +D EP +L + I Sbjct: 329 SSNMASLEEIKDIDADIRKEVEEAAQFATTDPEPPLEDLCNHIF 372 >gi|157964332|ref|YP_001499156.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia massiliae MTU5] gi|157844108|gb|ABV84609.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia massiliae MTU5] Length = 326 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 170/316 (53%), Positives = 225/316 (71%), Gaps = 1/316 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M +GD IT Sbjct: 11 TKEEYIKSFKNMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDMVKQKGDSTIT 70 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+H HI+ G + ++AEL GR G SKGKGGSMH+F N FYGGHGIVGAQV +G Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRVTGCSKGKGGSMHLFDVPNKFYGGHGIVGAQVPIG 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA KY + IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+ Sbjct: 131 TGLAFAEKYNDTHNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVA 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++ + K+G SF I G Q+DGMD + +A Y R + P+I+E+ TYRYRGH Sbjct: 191 RSTFMRDLYKKGASFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR +EE+ + DP+ +RK +L NK+ +E DLKEIE +V++I+ +VEF+ Sbjct: 251 SMSDPAKYRNKEEVEQY-KERDPLVIIRKTILDNKYVTEADLKEIEQSVKEIVKEAVEFS 309 Query: 348 QSDKEPDPAELYSDIL 363 ++ PD ELY+ + Sbjct: 310 ENSPLPDEGELYTQVY 325 >gi|310820663|ref|YP_003953021.1| pyruvate dehydrogenase complex, e1 component [Stigmatella aurantiaca DW4/3-1] gi|309393735|gb|ADO71194.1| Pyruvate dehydrogenase complex, E1 component [Stigmatella aurantiaca DW4/3-1] Length = 386 Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 159/321 (49%), Positives = 216/321 (67%), Gaps = 1/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 S ++KE L+ YR M LIRRFEE+AGQ YG+G + GFCHL IGQEA VG ++ D Sbjct: 15 ASPYSKELLLTMYRKMYLIRRFEERAGQQYGLGKIAGFCHLYIGQEATAVGAIEAIRPDD 74 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M++AYR+HG LA G DA +MAEL GR G SKGKGGSMH+F ++ FYGG+GIVG Q Sbjct: 75 YMLSAYRDHGQPLARGADAGMVMAELFGRGTGYSKGKGGSMHIFDIEHHFYGGYGIVGGQ 134 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + L G+AFA++YR D++ V FGD AANQG +E+ N+A+ W L VIY+ ENN+Y MG Sbjct: 135 IPLAAGMAFASRYRNEDRVTVCYFGDAAANQGAFHETLNMASKWKLPVIYICENNRYGMG 194 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+V R SA KR V++++ G VDGMD + T+ A YCRA KGP+++E TYR Sbjct: 195 TAVGRTSAVPEMYKRAVAYDMRGEPVDGMDCLKMYETVKDAAEYCRAGKGPVLLEANTYR 254 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGHSM+DPA YR+++E+ E R N DPI +++ L K A E + I+ V+ ++ + Sbjct: 255 FRGHSMADPATYRSKQEVEEERKN-DPIPKIKDYTLKKKLAKEEEFDAIDEEVKAQVDAA 313 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V+FA EP EL+ D ++ Sbjct: 314 VKFADESPEPSLEELWRDTIV 334 >gi|109503592|ref|XP_001060860.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like isoform 1 [Rattus norvegicus] gi|293342555|ref|XP_002725260.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like isoform 1 [Rattus norvegicus] Length = 392 Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 179/363 (49%), Positives = 241/363 (66%), Gaps = 10/363 (2%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLL 61 A++ + G + +A S + AT + D+ LE G V+ +E L YR+M Sbjct: 16 AQKPILNGKVLVA---SRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQT 72 Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG G+ Sbjct: 73 VRRMELKAFQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLP 132 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A KY D+ Sbjct: 133 VRAILAELTGRRGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALACKYNGKDE 190 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 +C+ +GDGAANQGQ++E++++AALW L I++ ENN+Y MGTSV RA+A T++ KRG Sbjct: 191 VCLTLYGDGAANQGQIFEAYDMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF 250 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREE 300 IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREE Sbjct: 251 --IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREE 308 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 I E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP EL Sbjct: 309 IQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGY 368 Query: 361 DIL 363 I Sbjct: 369 HIY 371 >gi|330994552|ref|ZP_08318476.1| Pyruvate dehydrogenase E1 component subunit alpha [Gluconacetobacter sp. SXCC-1] gi|329758406|gb|EGG74926.1| Pyruvate dehydrogenase E1 component subunit alpha [Gluconacetobacter sp. SXCC-1] Length = 319 Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 192/318 (60%), Positives = 251/318 (78%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + AY M+LIRRFEE+AGQLYGMG++GGFCHL IGQEAV+VG++M L +GD++I Sbjct: 1 MTEADLKEAYYQMVLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVVVGIQMELKQGDKII 60 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HG +LA G+D +MAELTGR+GG S GKGGSMHMFS++ FYGGHGIVGAQVSL Sbjct: 61 TSYRDHGQMLAAGMDPRGVMAELTGREGGYSHGKGGSMHMFSSEKHFYGGHGIVGAQVSL 120 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AFANKYR +D++ V +G+GA+NQGQVYESFN+AAL L ++V+ENN+Y MGTSV Sbjct: 121 GIGLAFANKYRGTDEVSVTYYGEGASNQGQVYESFNLAALHRLPCLFVLENNRYGMGTSV 180 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA + G + IPGM VDGMD+ AV+A +AVA+CRA KGP+++E+ TYRYRG Sbjct: 181 ERASASKALWRNGEPWGIPGMYVDGMDVEAVRAAAAEAVAHCRAGKGPVLMEVDTYRYRG 240 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR R E++E+R NHDPI++VR+ LL A E DLK ++ V+ ++ ++ EF Sbjct: 241 HSMSDPAKYRQRSEVDEIRKNHDPIDRVRRELLERGVA-ESDLKAMDDRVKAVVVDAAEF 299 Query: 347 AQSDKEPDPAELYSDILI 364 AQ+ EPDP+EL++DIL+ Sbjct: 300 AQTSPEPDPSELWTDILV 317 >gi|37522413|ref|NP_925790.1| pyruvate dehydrogenase E1 alpha-subunit [Gloeobacter violaceus PCC 7421] gi|35213414|dbj|BAC90785.1| pyruvate dehydrogenase E1 alpha-subunit [Gloeobacter violaceus PCC 7421] Length = 331 Score = 365 bits (938), Expect = 6e-99, Method: Composition-based stats. Identities = 132/315 (41%), Positives = 188/315 (59%), Gaps = 1/315 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + + L+ YR M+L R FE+ Q+Y G + GF HL GQEAV G+ +L D Sbjct: 10 PAVERSEALALYRDMVLGRTFEDTCAQMYYRGKLFGFVHLYNGQEAVSTGIIKALRPDDY 69 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + YR+H H L+ GV A +MAEL G+ G SKG+GGSMH+FS ++ F GG +G + Sbjct: 70 VTSTYRDHVHALSKGVSARSVMAELFGKATGCSKGRGGSMHLFSAEHNFLGGFAFIGEGI 129 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + G AF KY+ +D++ FGDG N GQ +E N+AALW L +++V+ENN +++G Sbjct: 130 PIACGAAFTAKYQGTDRVSASFFGDGTTNNGQFFECLNMAALWKLPILFVVENNLWSIGM 189 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 RAS+ K+ +F IPG++VDGMD+ AV+A +AV R GP +IE TYR+ Sbjct: 190 YHPRASSVVEIYKKADAFGIPGVRVDGMDVLAVRAVAKEAVERARTGGGPTLIECTTYRF 249 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHS++DP R E R DP+ ++R L AS DLK IE VR ++++V Sbjct: 250 RGHSLADPDELRDPAEKAHWR-KQDPLPRLRVWLEEQGLASVEDLKRIEQEVRAEVDDAV 308 Query: 345 EFAQSDKEPDPAELY 359 +FA+ EP ELY Sbjct: 309 QFAEDSPEPPLDELY 323 >gi|56552502|ref|YP_163341.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Zymomonas mobilis subsp. mobilis ZM4] gi|260753835|ref|YP_003226728.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|8474180|sp|O66112|ODPA_ZYMMO RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|2982635|emb|CAA73384.1| pyruvate dehydrogenase alpha2 subunit [Zymomonas mobilis] gi|56544076|gb|AAV90230.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Zymomonas mobilis subsp. mobilis ZM4] gi|258553198|gb|ACV76144.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 354 Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats. Identities = 186/352 (52%), Positives = 250/352 (71%), Gaps = 4/352 (1%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY 73 K + + K S++ D+P + G ++ +E+ L YR ML+IRRFEE+ GQLY Sbjct: 3 KATQDSNRPHKADVGSAIPNHDLPPIPGRYHAD--REELLEFYRRMLMIRRFEERCGQLY 60 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGR 132 G+G++ GFCHL IGQEAV VG++ +L G D +IT YREHGH+LA G+D +MAELTGR Sbjct: 61 GLGLIAGFCHLYIGQEAVAVGLQAALQPGRDSVITGYREHGHMLAYGIDPKIVMAELTGR 120 Query: 133 QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAA 192 GIS GKGGSMHMFST++ F+GG+GIVGAQV LG G+AFA+KYR FGDG+A Sbjct: 121 ASGISHGKGGSMHMFSTEHKFFGGNGIVGAQVPLGAGLAFAHKYRNDGGCSAAYFGDGSA 180 Query: 193 NQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 NQGQVYE++N+AALW L VI+VIENN YAMGTS+ RA+A T S+RG F IP + VDGM Sbjct: 181 NQGQVYEAYNMAALWKLPVIFVIENNGYAMGTSIQRANAHTALSERGAGFGIPALVVDGM 240 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIE 312 D+ V+ AV + +A KGPII+EM TYRYRGHSMSDPA YR+REE+N+M+ NHDP++ Sbjct: 241 DVLEVRGAATVAVDWVQAGKGPIILEMKTYRYRGHSMSDPARYRSREEVNDMKENHDPLD 300 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 ++K L E +L +++ ++R+ + + +FA+ P ELY++IL+ Sbjct: 301 NLKKDLFAAGV-PEAELVKLDEDIRQQVKEAADFAEKAPLPADEELYTNILV 351 >gi|91205074|ref|YP_537429.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia bellii RML369-C] gi|157827590|ref|YP_001496654.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia bellii OSU 85-389] gi|122425977|sp|Q1RJX4|ODPA_RICBR RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|91068618|gb|ABE04340.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia bellii RML369-C] gi|157802894|gb|ABV79617.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia bellii OSU 85-389] Length = 326 Score = 365 bits (937), Expect = 7e-99, Method: Composition-based stats. Identities = 171/316 (54%), Positives = 230/316 (72%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M + D M+T+ Sbjct: 12 KEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDMVKQKEDSMVTS 71 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+H HI+ G + ++AEL GR G SKGKGGSMH+F N FYGGHGIVGAQV +GT Sbjct: 72 YRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDVPNKFYGGHGIVGAQVPIGT 131 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+AFA KY ++ IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+R Sbjct: 132 GLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVAR 191 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++ + K+G SF I G Q++GMD + + +A Y R + P+I+E+ TYRYRGHS Sbjct: 192 STFMRDLYKKGESFGIKGFQLNGMDFEEMYDGVKQAAEYVRENSMPLILEVKTYRYRGHS 251 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YR++EE+ E DPI ++RK +L N +ASE DLKEIE +V++I+ +VEF++ Sbjct: 252 MSDPAKYRSKEEV-ETYKERDPITEIRKIILENNYASEADLKEIEQSVKEIVKEAVEFSE 310 Query: 349 SDKEPDPAELYSDILI 364 + P+ ELY+ I + Sbjct: 311 NSPLPNEEELYTQIYV 326 >gi|148554145|ref|YP_001261727.1| pyruvate dehydrogenase [Sphingomonas wittichii RW1] gi|148499335|gb|ABQ67589.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphingomonas wittichii RW1] Length = 376 Score = 365 bits (937), Expect = 7e-99, Method: Composition-based stats. Identities = 191/318 (60%), Positives = 246/318 (77%), Gaps = 2/318 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMI 106 +KE+ L YR MLLIRRFEEKAGQLYG+G++GGFCHL IGQEAV VG++ +L G D +I Sbjct: 57 SKEEMLEFYRQMLLIRRFEEKAGQLYGLGLIGGFCHLYIGQEAVAVGLQSALEVGKDSVI 116 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HGH+LA G+D IMAELTGR GIS+GKGGSMHMFS + FYGGHGIVGAQVSL Sbjct: 117 TGYRDHGHMLAYGIDPKLIMAELTGRAAGISRGKGGSMHMFSVDHRFYGGHGIVGAQVSL 176 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTG+AF +KY + + FGDGA+NQGQVYESFN+A LW L +I+VIENNQYAMGTSV Sbjct: 177 GTGLAFKHKYAGDGGVAMAYFGDGASNQGQVYESFNMAELWKLPIIFVIENNQYAMGTSV 236 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +R+SA+ +RG SF IPG+QVDGMD+ AV+ ++AVA+ RA KGPI++E+ TYRYRG Sbjct: 237 NRSSAEDQLYRRGESFRIPGIQVDGMDVLAVRGAAEEAVAWVRAGKGPILLELKTYRYRG 296 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR+R+E+ +R DPI+ ++K L E +L+ +E ++R I+ + +F Sbjct: 297 HSMSDPAKYRSRDEVQSVREKSDPIDHLKKELEAAGV-GEDELRTLEKDIRAIVTEAADF 355 Query: 347 AQSDKEPDPAELYSDILI 364 A+ EP+P ELY+D+L+ Sbjct: 356 AEQSPEPEPEELYTDVLV 373 >gi|229586511|ref|YP_002845012.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia africae ESF-5] gi|228021561|gb|ACP53269.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia africae ESF-5] Length = 326 Score = 365 bits (936), Expect = 8e-99, Method: Composition-based stats. Identities = 169/316 (53%), Positives = 227/316 (71%), Gaps = 1/316 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M +GD IT Sbjct: 11 TKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDMVKHKGDSTIT 70 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+H HI+ G + ++AEL GR G SKGKGGSMH+F+ N FYGGHGIVGAQV +G Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFNVPNKFYGGHGIVGAQVPIG 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA KY + IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+ Sbjct: 131 TGLAFAEKYNDTHNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVA 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++ + K+G SF I G Q+DGMD + +A Y R + P+I+E+ TYRYRGH Sbjct: 191 RSTFMRDLYKKGASFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR++EE+ + + DP+ +RK +L NK+ +E DLK IE +V++I+ +VEF+ Sbjct: 251 SMSDPAKYRSKEEVEQYKE-RDPLVIIRKTILDNKYVTEADLKAIEQSVKEIVKEAVEFS 309 Query: 348 QSDKEPDPAELYSDIL 363 ++ PD ELY+ + Sbjct: 310 ENSPLPDEGELYTQVY 325 >gi|170755603|ref|YP_001781263.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum B1 str. Okra] gi|169120815|gb|ACA44651.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Clostridium botulinum B1 str. Okra] Length = 327 Score = 365 bits (936), Expect = 8e-99, Method: Composition-based stats. Identities = 126/320 (39%), Positives = 188/320 (58%), Gaps = 1/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + N+ + Y+ ML IR+FE+ A + G + GF HL IG+EAV G+ +L + D Sbjct: 1 MKKLNENSIVEMYKTMLKIRKFEQVAMNTFAEGKIPGFVHLYIGEEAVATGVCANLKDSD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGHILA G D +MAEL G+ G KGKGGSMH+ G G +GIVGA Sbjct: 61 YITSTHRGHGHILAKGGDLKFMMAELFGKATGYCKGKGGSMHIADATKGILGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 ++ G + +YR +D++CV FGD + NQG +ES N+A++W L V++V ENN Y + Sbjct: 121 HNIAVGAGLSAQYRGTDQVCVCFFGDASTNQGTFHESLNMASVWKLPVVFVCENNLYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 S +R A + + RGV++N+PG+ VDG D+ AV +A+ R KGP +IE TYR Sbjct: 181 MSQNRHQAIKDVADRGVAYNVPGIVVDGNDVFAVYEAAKEAIKRAREGKGPTLIECKTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGH DP Y+ EE E + DPI + + L+ N+ +E LKE++ V I + Sbjct: 241 HRGHFEGDPCVYKPTEEQEEWLAK-DPIPRFERYLVENEILTEEKLKEVQNKVESQIGEA 299 Query: 344 VEFAQSDKEPDPAELYSDIL 363 V+FA + P+ + D+ Sbjct: 300 VDFANNSPYPELESVLEDVY 319 >gi|170743960|ref|YP_001772615.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Methylobacterium sp. 4-46] gi|168198234|gb|ACA20181.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylobacterium sp. 4-46] Length = 346 Score = 365 bits (936), Expect = 8e-99, Method: Composition-based stats. Identities = 210/326 (64%), Positives = 261/326 (80%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 F +++++ AY MLLIRRFEEKAGQLYGMG++GGFCHL IGQEAV++G++M+ Sbjct: 16 PPPANAPHFTRDEDVHAYSEMLLIRRFEEKAGQLYGMGLIGGFCHLYIGQEAVVIGVQMA 75 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 EGDQ+IT YR+HGH+LACG+D +MAELTGR+GG S+GKGGSMHMFS + FYGGHG Sbjct: 76 SKEGDQVITGYRDHGHMLACGMDPKGVMAELTGRRGGYSRGKGGSMHMFSREKNFYGGHG 135 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVGAQVSLGTG+ FANKYR + + GDGAANQGQVYESFN+A LW L V+YVIENN Sbjct: 136 IVGAQVSLGTGLGFANKYRGDGAVSLTYMGDGAANQGQVYESFNMAELWKLPVVYVIENN 195 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 +YAMGTSV+RASAQT+FSKRGVSF IPG QVDGMD+RAV+ +A+A+ R+ +GP I+E Sbjct: 196 RYAMGTSVTRASAQTDFSKRGVSFGIPGEQVDGMDVRAVRDAAARAIAHARSGEGPYILE 255 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 M TYRYRGHSMSDPA YRT++E+ MR DPIEQVRKRLL E ++K I+ VR+ Sbjct: 256 MQTYRYRGHSMSDPAKYRTKDEVARMREESDPIEQVRKRLLGPHKVPENEIKAIDAQVRE 315 Query: 339 IINNSVEFAQSDKEPDPAELYSDILI 364 I+N + +FA +D EPDPAEL++D+L+ Sbjct: 316 IVNEAADFATNDPEPDPAELWTDVLL 341 >gi|109503594|ref|XP_001060918.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like isoform 2 [Rattus norvegicus] gi|293342557|ref|XP_002725261.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like isoform 2 [Rattus norvegicus] Length = 399 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 179/367 (48%), Positives = 241/367 (65%), Gaps = 11/367 (2%) Query: 4 AKQDVTVGDI----KMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYR 57 A++ + G++ L S + AT + D+ LE G V+ +E L YR Sbjct: 16 AQKPILNGNLALQASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYR 75 Query: 58 LMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 +M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 76 MMQTVRRMELKAFQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFT 135 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 G+ I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A KY Sbjct: 136 RGLPVRAILAELTGRRGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALACKYN 193 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 D++C+ +GDGAANQGQ++E++++AALW L I++ ENN+Y MGTSV RA+A T++ K Sbjct: 194 GKDEVCLTLYGDGAANQGQIFEAYDMAALWKLPCIFICENNRYGMGTSVERAAASTDYYK 253 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYR 296 RG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP +YR Sbjct: 254 RGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYR 311 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 TREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 312 TREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLE 371 Query: 357 ELYSDIL 363 EL I Sbjct: 372 ELGYHIY 378 >gi|157828224|ref|YP_001494466.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932927|ref|YP_001649716.1| pyruvate dehydrogenase E1 component subunit alpha [Rickettsia rickettsii str. Iowa] gi|157800705|gb|ABV75958.1| pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908014|gb|ABY72310.1| pyruvate dehydrogenase E1 component alpha subunit [Rickettsia rickettsii str. Iowa] Length = 326 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 168/316 (53%), Positives = 227/316 (71%), Gaps = 1/316 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M +GD IT Sbjct: 11 TKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDMVKQKGDSTIT 70 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+H HI+ G + ++AEL GR G SKGKGGSMH+F+ + FYGGHGIVGAQV +G Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFNVPHKFYGGHGIVGAQVPIG 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA KY + IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+ Sbjct: 131 TGLAFAEKYNDTHNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVA 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++ + K+G SF I G Q+DGMD + + +A Y R + P+I+E+ TYRYRGH Sbjct: 191 RSTFMRDLYKKGASFGIKGFQLDGMDFKEMYDGSKQAAEYVRENSFPLILEVKTYRYRGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR++EE+ + DP+ +RK +L NK+ +E DLK IE +V++I+ +VEF+ Sbjct: 251 SMSDPAKYRSKEEVEQY-KERDPLVIIRKTILDNKYVTEADLKAIEQSVKEIVKEAVEFS 309 Query: 348 QSDKEPDPAELYSDIL 363 ++ PD ELY+ + Sbjct: 310 ENSPLPDEGELYTQVY 325 >gi|229103381|ref|ZP_04234063.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-28] gi|228679877|gb|EEL34072.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-28] Length = 341 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 127/319 (39%), Positives = 184/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 20 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 79 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 80 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 139 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 140 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 199 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV +AV R GP +IE +TYR Sbjct: 200 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAKEAVERARNGGGPTLIECMTYRNY 259 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S++ Sbjct: 260 GHFEGEAQTYKTSEEKEEHLNEKDTIVNFRKHLIHEGLLTESELVDMEKAVDEAVQRSID 319 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 320 FSENSPYPEDEELLKDVYV 338 >gi|1079460|pir||A49360 pyruvate dehydrogenase (lipoamide) (EC 1.2.4.1) alpha chain precursor - dunnart (Sminthopsis macroura) (fragment) Length = 370 Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats. Identities = 172/347 (49%), Positives = 231/347 (66%), Gaps = 7/347 (2%) Query: 20 SVSAKRAATSSVDCVDIPFLE--GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 S + AT + D+ LE + +E+ L Y++M +RR E KA QLY + Sbjct: 7 SRNFANDATFDIKKCDVHRLEEGPPTTAVLTREEGLKYYKIMQTVRRMELKADQLYKQKI 66 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 + GFCHL GQEA +G++ + D +ITAYR HG G+ +I+AELTGR+GG + Sbjct: 67 IRGFCHLYDGQEACCMGLEAGINPTDHVITAYRAHGFTYTRGLPVREILAELTGRRGGCA 126 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHM+ FYGG+GIVGAQV LG GIA A KY D+IC+ +GDGAANQGQ+ Sbjct: 127 KGKGGSMHMY--AKNFYGGNGIVGAQVPLGVGIALACKYNEKDEICLTLYGDGAANQGQI 184 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 +E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG IPG+ VDGMD+ V Sbjct: 185 FEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGIMVDGMDVLCV 242 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRK 316 + A AYCR+ KGP+++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ Sbjct: 243 REATKFAAAYCRSGKGPMLMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKD 302 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R+++N AS +LKEI++ VRK I ++ +FA +D EP EL I Sbjct: 303 RMVNNNLASIEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIY 349 >gi|258592349|emb|CBE68658.1| Pyruvate dehydrogenase E1 component, alpha subunit [NC10 bacterium 'Dutch sediment'] Length = 323 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 145/321 (45%), Positives = 198/321 (61%), Gaps = 1/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + +++ + R MLL+RRFEEK ++Y MG +GGF HL IGQEAV G L D Sbjct: 1 MRKLERKELVELLRQMLLMRRFEEKCAEMYTMGKIGGFLHLYIGQEAVATGALSVLRPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +I +YREHGH LA G D KIMAEL GR G+ KGKGGSMH+F + F GGH IV Q Sbjct: 61 YVIASYREHGHALARGCDPGKIMAELFGRADGLCKGKGGSMHLFDKTHNFLGGHAIVAGQ 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + +GTG AFA++Y D++ + FGD A NQG +E+FN+AALW+L ++Y+ ENN+Y MG Sbjct: 121 IPIGTGAAFASQYEGKDQVTLCFFGDAAVNQGVFHEAFNLAALWHLPIVYICENNRYGMG 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+V RA+ +R ++ +PG VDGMD+ AV+ + AV R + P +IE TYR Sbjct: 181 TAVERATPVKELYRRAEAYGMPGEAVDGMDVLAVRECVGTAVERARRERIPSLIEAKTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGHSM+DP YRT+EEI DP+ R L E D K +E VR + + Sbjct: 241 FRGHSMADPGTYRTKEEIER-EKQRDPLVLFRDYLTAEAMIKESDWKALEKEVRVTVEEA 299 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V +A + EP L +D+ + Sbjct: 300 VRYADASPEPPVEWLCTDVYV 320 >gi|241762255|ref|ZP_04760337.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373302|gb|EER62921.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 354 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 186/352 (52%), Positives = 250/352 (71%), Gaps = 4/352 (1%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY 73 K + + K S++ D+P + G ++ +E+ L YR ML+IRRFEE+ GQLY Sbjct: 3 KATQDSNRPHKADVGSAIPNHDLPPIPGRYHAD--REELLEFYRRMLMIRRFEERCGQLY 60 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGR 132 G+G++ GFCHL IGQEAV VG++ +L G D +IT YREHGH+LA G+D +MAELTGR Sbjct: 61 GLGLIAGFCHLYIGQEAVAVGLQAALQPGRDSVITGYREHGHMLAYGIDPKIVMAELTGR 120 Query: 133 QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAA 192 GIS GKGGSMHMFST++ F+GG+GIVGAQV LG G+AFA+KYR FGDG+A Sbjct: 121 ASGISHGKGGSMHMFSTEHKFFGGNGIVGAQVPLGAGLAFAHKYRNDGGCSAAYFGDGSA 180 Query: 193 NQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 NQGQVYE++N+AALW L VI+VIENN YAMGTS+ RA+A T S+RG F IP + VDGM Sbjct: 181 NQGQVYEAYNMAALWKLPVIFVIENNGYAMGTSIQRANAHTALSERGAGFGIPALVVDGM 240 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIE 312 D+ V+ AV + +A KGPII+EM TYRYRGHSMSDPA YR+REE+N+M+ NHDP++ Sbjct: 241 DVLEVRGAATVAVDWVQAGKGPIILEMKTYRYRGHSMSDPARYRSREEVNDMKENHDPLD 300 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 ++K L E +L +++ ++R+ + + +FA+ P ELY++IL+ Sbjct: 301 NLKKDLFAAGV-PEVELVKLDEDIRQQVKEAADFAEKAPLPADEELYTNILV 351 >gi|295689365|ref|YP_003593058.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Caulobacter segnis ATCC 21756] gi|295431268|gb|ADG10440.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Caulobacter segnis ATCC 21756] Length = 343 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 189/316 (59%), Positives = 248/316 (78%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K++ L Y+ MLLIRRFEE+AGQLYGMG++GGFCHL IGQEA+ VGM+ +GDQ+IT Sbjct: 25 KDELLKFYQDMLLIRRFEERAGQLYGMGLIGGFCHLYIGQEAIAVGMQSISQKGDQIITG 84 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HGH+LA G+D ++MAELTGR GG SKGKGGSMHMF + GFYGGHGIVGAQVSLGT Sbjct: 85 YRDHGHMLAAGMDPREVMAELTGRAGGSSKGKGGSMHMFDVETGFYGGHGIVGAQVSLGT 144 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A AN Y+ + + GDGAANQGQVYESFN+A LW L V+YVIENNQYAMGT+V R Sbjct: 145 GLALANAYKGNGNVSYAYMGDGAANQGQVYESFNMAQLWKLPVVYVIENNQYAMGTAVER 204 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++++T F KRG+SF IPG +VDGMD+ AV+ +A + R+ +GP I+EM TYRYRGHS Sbjct: 205 SASETAFHKRGISFRIPGEEVDGMDVVAVREAGARATEHARSGQGPYILEMKTYRYRGHS 264 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YRT+EE++E+++ DPI+ +++RL +E DLK ++ V++I+ + EFA+ Sbjct: 265 MSDPAKYRTKEEVDEVKTTRDPIDHIKERLAKAGV-TEDDLKSVDAEVKRIVAEAAEFAR 323 Query: 349 SDKEPDPAELYSDILI 364 + EPDP+ELY+D+ + Sbjct: 324 TSPEPDPSELYTDVYL 339 >gi|226314743|ref|YP_002774639.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Brevibacillus brevis NBRC 100599] gi|226097693|dbj|BAH46135.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Brevibacillus brevis NBRC 100599] Length = 332 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 125/319 (39%), Positives = 184/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 ++E+ Y+ ML IR+FE+K L+G G + GF HL G+EA+ VG+ L + D + Sbjct: 12 PLSREKAAWMYQKMLEIRKFEDKVHDLFGQGKIPGFVHLYAGEEAIAVGLCAHLDDSDTI 71 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAE+ GR G+ KGKGGSMH+ G G +GIVG Sbjct: 72 TSTHRGHGHCIAKGCDLNGMMAEIYGRATGLCKGKGGSMHIADLDKGMLGANGIVGGGYP 131 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+++ + V FGDGA NQG +E N+AA+W L ++V ENN Y T Sbjct: 132 LACGAALTAKYKQTGAVSVCFFGDGANNQGTFHEGINLAAIWKLPAVFVAENNGYGEATP 191 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S AS+ + R +++NIPG++VDG D+ AV +A+ R +GP +IE +TYR Sbjct: 192 FSYASSCKTIADRAIAYNIPGIRVDGKDVLAVYQAAQEAIERARRGEGPTLIECVTYRNY 251 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D Y+ EE S D I + + LL K +E +L EIE V K + +V Sbjct: 252 GHFEGDAQKYKKDEEKKAHLSEIDAIRKFQNDLLSGKLFTENELGEIEAAVDKAVEEAVA 311 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+P+EL +D+ + Sbjct: 312 FSENSPYPEPSELLTDVYV 330 >gi|108761872|ref|YP_630885.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase subunit alpha [Myxococcus xanthus DK 1622] gi|108465752|gb|ABF90937.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, alpha subunit [Myxococcus xanthus DK 1622] Length = 389 Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats. Identities = 157/321 (48%), Positives = 216/321 (67%), Gaps = 1/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 S ++KE L YR M LIRRFEE+AGQ Y +G + GFCHL IGQEAV VG +L D Sbjct: 18 ASPYSKELLLDMYRKMYLIRRFEERAGQQYTLGKIAGFCHLYIGQEAVAVGPVEALRPDD 77 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 M++AYR+HG LA G DA +MAEL GR G SKGKGGSMH+F ++ FYGG+GIVG Q Sbjct: 78 YMLSAYRDHGQPLARGSDAGMVMAELMGRDTGYSKGKGGSMHIFDIEHHFYGGYGIVGGQ 137 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + L G+AFA++YR D++ V FGD AA+QG ++E+FN+A+ W L VIY+ ENN+Y MG Sbjct: 138 IPLAAGMAFASRYRNEDRVTVCYFGDAAASQGALHETFNMASKWKLPVIYICENNRYGMG 197 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T++SR +A KR ++++ G VDGMD+ A+ + A YCRA KGP+++E TYR Sbjct: 198 TAISRIAAVPEIYKRASAYDMRGEPVDGMDVLAMYEAVKDAAEYCRAGKGPVLLEANTYR 257 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGHSM+DPA YRT++E+ + R DPI ++R +L A + + IE V ++ + Sbjct: 258 FRGHSMADPATYRTKQEVEDERKG-DPIPKLRAYILKQGLAQDDVFESIEAEVNAQVDQA 316 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V+FA EP EL+ D ++ Sbjct: 317 VKFADESPEPSLDELWRDTIV 337 >gi|297293054|ref|XP_001097880.2| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial [Macaca mulatta] Length = 438 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 173/361 (47%), Positives = 237/361 (65%), Gaps = 7/361 (1%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIR 63 + V + L S ++ AT ++ D+ LE G V+ + + L YR+ML +R Sbjct: 61 RRVAQKSARRVLVASRNSSNDATFEIEKCDLHLLEEGPPVTTVLTRAEGLKYYRMMLTVR 120 Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 R E KA QLY + GFCHLC GQEA VG++ + D +IT+YR HG G+ Sbjct: 121 RMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHLITSYRAHGMCYTRGLSVR 180 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I+ ELTGR+GG +KGKGGSMHM++ FYGG+GIVGAQ LG GIA A KY+ +++IC Sbjct: 181 SILTELTGRRGGCAKGKGGSMHMYTK--NFYGGNGIVGAQGPLGAGIALACKYKGNNEIC 238 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + +GDGAANQGQ+ E+FN+AALW L +++ ENN YAMGTS RA+A T++ KRG Sbjct: 239 LTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYAMGTSAERAAASTDYYKRGNF-- 296 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEIN 302 IPG++VDGMD+ V+ A YCR+ KGPI++E+ TYRY GHSMSDP +YRTR+EI Sbjct: 297 IPGLKVDGMDVLCVREATKFAADYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTRDEIQ 356 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 E+RS DPI ++ R++++K A+ +LKEI V+K I+++ +FA SD EP EL I Sbjct: 357 EVRSKRDPIMILQDRMVNSKLATVEELKEIGTEVKKEIDDAAQFAISDPEPRLEELGHHI 416 Query: 363 L 363 Sbjct: 417 Y 417 >gi|149638286|ref|XP_001514100.1| PREDICTED: similar to pyruvate dehydrogenase (lipoamide) alpha [Ornithorhynchus anatinus] Length = 568 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 176/352 (50%), Positives = 235/352 (66%), Gaps = 7/352 (1%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQL 72 L S + AT + D+ LE G V+ +E+ L YR M IRR E KA QL Sbjct: 200 RVLVASRNFANDATFDIKKCDLHRLEEGPPVTTVLTREEGLKYYRTMQTIRRMELKADQL 259 Query: 73 YGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR 132 Y ++ GFCHL GQEA VG++ + D +ITAYR HG+ G+ +I+AELTGR Sbjct: 260 YKQKIIRGFCHLYDGQEACCVGLEAGINPTDHVITAYRAHGYTYTRGLAVREILAELTGR 319 Query: 133 QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAA 192 +GG +KGKGGSMHM+ N FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAA Sbjct: 320 KGGCAKGKGGSMHMY--ANNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAA 377 Query: 193 NQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 NQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG IPG++VDGM Sbjct: 378 NQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDY--IPGIRVDGM 435 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPI 311 DI V+ A A+CR+ KGP+++E+ TYRY GHSMSDP +YRTREEI E+RS DPI Sbjct: 436 DILCVREATKFAAAHCRSGKGPMLMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPI 495 Query: 312 EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++ R+++N + +LKEI++ VRK I ++ +FA +D EP EL I Sbjct: 496 TLLKDRMVNNNLTTVEELKEIDVEVRKEIEDAAQFATTDPEPPLEELGYHIY 547 >gi|315499906|ref|YP_004088709.1| pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit [Asticcacaulis excentricus CB 48] gi|315417918|gb|ADU14558.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Asticcacaulis excentricus CB 48] Length = 338 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 194/319 (60%), Positives = 249/319 (78%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +K++ L YR M+LIRRFEE+AGQLYGMG++GGFCHL IGQEAV VGM+ + +GDQ+ Sbjct: 19 NVSKDELLKYYREMVLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVAVGMEAASIDGDQV 78 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 IT YR+HGH+LA G+D +MAELTGR GG SKGKGGSMHMF + GF+GGHGIVGAQVS Sbjct: 79 ITGYRDHGHMLAAGMDPKAVMAELTGRIGGSSKGKGGSMHMFDIETGFFGGHGIVGAQVS 138 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTG+AFA+ YR + + FGDGAANQGQVYESFN+A LWNL V+YVIENN+YAMGT+ Sbjct: 139 LGTGLAFADWYRNNGNVSFTYFGDGAANQGQVYESFNMAKLWNLPVVYVIENNEYAMGTA 198 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 ++RASA TN S+RG SF IPG VDGMD+ AVK ++A Y R+ KGP I+EM TYRYR Sbjct: 199 LARASATTNLSQRGASFGIPGETVDGMDVFAVKEAAERAAEYARSGKGPYILEMKTYRYR 258 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YR++EE++E+++ DPI+ ++ L E ++K I+ ++ I+ +VE Sbjct: 259 GHSMSDPAKYRSKEEVDEVKTTRDPIDHIKTMLEQAGV-EEAEIKAIDNEIKAIVMEAVE 317 Query: 346 FAQSDKEPDPAELYSDILI 364 FAQ+ EPDP+ELY+D+ + Sbjct: 318 FAQTSPEPDPSELYTDVYL 336 >gi|1709452|sp|P52900|ODPA_SMIMA RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|450633|gb|AAA31589.1| pyruvate dehydrogenase E1-alpha subunit [Sminthopsis macroura] Length = 363 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 171/344 (49%), Positives = 229/344 (66%), Gaps = 7/344 (2%) Query: 23 AKRAATSSVDCVDIPFLE--GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + D+ LE + +E+ L Y++M +RR E KA QLY ++ G Sbjct: 3 FANDATFDIKKCDVHRLEEGPPTTAVLTREEGLKYYKIMQTVRRMELKADQLYKQKIIRG 62 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA +G++ + D +ITAYR HG G+ +I+AELTGR+GG +KGK Sbjct: 63 FCHLYDGQEACCMGLEAGINPTDHVITAYRAHGFTYTRGLPVREILAELTGRRGGCAKGK 122 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+ FYGG+GIVGAQV LG GIA A KY D+IC+ +GDGAANQGQ++E+ Sbjct: 123 GGSMHMY--AKNFYGGNGIVGAQVPLGVGIALACKYNEKDEICLTLYGDGAANQGQIFEA 180 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG IPG+ VDGMD+ V+ Sbjct: 181 YNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGIMVDGMDVLCVREA 238 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 A AYCR+ KGP+++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++ Sbjct: 239 TKFAAAYCRSGKGPMLMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMV 298 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +N AS +LKEI++ VRK I ++ +FA +D EP EL I Sbjct: 299 NNNLASIEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIY 342 >gi|332216857|ref|XP_003257567.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial-like [Nomascus leucogenys] Length = 391 Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats. Identities = 174/361 (48%), Positives = 236/361 (65%), Gaps = 7/361 (1%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIR 63 + V + L S ++ AT + D+ LE G V+ + + L YR+ML +R Sbjct: 14 RRVAQKSARRVLVASRNSSNDATFEIKQCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVR 73 Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 R E KA QLY + GFCHLC GQEA VG++ + D +IT+YR HG G+ Sbjct: 74 RMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVR 133 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I+AELTGR+GG +KGKGGSMHM++ FYGG+GIVGAQ LG GIA A KY+ +D+IC Sbjct: 134 SILAELTGRRGGCAKGKGGSMHMYTK--NFYGGNGIVGAQGPLGAGIALACKYKGNDEIC 191 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + +GDGAANQGQ+ E+FN+AALW L +++ ENN YAMGTS RA+A +++ KRG Sbjct: 192 LTLYGDGAANQGQMAEAFNMAALWKLPCVFICENNLYAMGTSTERAAASSDYYKRGNF-- 249 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEIN 302 IPG++VDGMD+ V+ A YCR+ KGPI++E+ TYR+ GHSMSDP +YRTREEI Sbjct: 250 IPGLKVDGMDVLCVREATKFAADYCRSGKGPILMELQTYRFHGHSMSDPGVSYRTREEIQ 309 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 E+RS DPI ++ R++ +K A+ +LKEI VRK I+++ +FA +D EP EL I Sbjct: 310 EVRSKRDPIMILQDRIVSSKLATVEELKEIGTEVRKEIDDASQFATTDIEPHLEELGHHI 369 Query: 363 L 363 Sbjct: 370 Y 370 >gi|229097293|ref|ZP_04228255.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-29] gi|229116289|ref|ZP_04245679.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock1-3] gi|228667121|gb|EEL22573.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock1-3] gi|228686104|gb|EEL40020.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-29] Length = 341 Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats. Identities = 127/319 (39%), Positives = 185/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 20 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 79 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 80 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 139 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 140 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 199 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP +IE +TYR Sbjct: 200 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTLIECMTYRNY 259 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S++ Sbjct: 260 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDEAVQRSID 319 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 320 FSENSPYPEDEELLKDVYV 338 >gi|312889947|ref|ZP_07749491.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Mucilaginibacter paludis DSM 18603] gi|311297479|gb|EFQ74604.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Mucilaginibacter paludis DSM 18603] Length = 331 Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats. Identities = 157/318 (49%), Positives = 214/318 (67%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 K+ L Y MLL+R+FEEKAGQLYG + GFCHL IGQEAV+ G + D MI Sbjct: 6 ITKDTYLHWYESMLLMRKFEEKAGQLYGQQKIRGFCHLYIGQEAVLAGAMSVIRHDDSMI 65 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR+H H LA G + +MAEL G+ G SKGKGGSMHMF +N FYGGHGIVG Q+ + Sbjct: 66 TAYRDHAHALAKGTHPNAVMAELYGKATGCSKGKGGSMHMFDKENHFYGGHGIVGGQIPM 125 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIAFANKY D + + GDGA QG + E+FN+A+LW L VI+V ENN YAMGTS+ Sbjct: 126 GAGIAFANKYSGRDNVNICYMGDGAVRQGALTETFNMASLWKLPVIFVCENNGYAMGTSL 185 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 +R + Q + K G+ ++IP VDGMD AV MD+A+ R GP +EM TYRY+G Sbjct: 186 ARTTIQHDIYKLGLPYDIPSSAVDGMDPVAVHNAMDEAIQRARKGDGPTFLEMRTYRYKG 245 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDP YRT++E+ ++ DPIE V++ ++ K+A + +E++ ++ I++ SV+F Sbjct: 246 HSMSDPQKYRTKDEVESYKAK-DPIETVKQTIVAEKYADDKWFEEMDEKIKAIVDESVKF 304 Query: 347 AQSDKEPDPAELYSDILI 364 ++ P+ +ELY+D+ + Sbjct: 305 SEESPWPEASELYTDVYV 322 >gi|326913568|ref|XP_003203108.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like [Meleagris gallopavo] Length = 416 Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 174/357 (48%), Positives = 234/357 (65%), Gaps = 7/357 (1%) Query: 10 VGDIKMALNPSVSAKRAATSSVDCVDIPFLE--GFEVSEFNKEQELSAYRLMLLIRRFEE 67 + +A AT + D+ LE + +E+ L Y+ M IRR E Sbjct: 41 ASRVMVASRNYADFANEATFEIKPCDLHRLEEGPPTTAVLTREEGLHYYKTMQTIRRMEL 100 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 K+ QLY ++ GFCHL GQEA VG+++++ D +ITAYR HG A GV +I+A Sbjct: 101 KSDQLYKQKIIRGFCHLYDGQEACCVGLEVAIKPTDHVITAYRAHGFTYARGVPVREILA 160 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 ELTGR+GG KGKGGSMHM++ FYGG+GIVGAQV LG GIA A KY +++C+ + Sbjct: 161 ELTGRKGGCVKGKGGSMHMYTK--NFYGGNGIVGAQVPLGAGIALACKYFGKNEVCLTLY 218 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG IPG+ Sbjct: 219 GDGAANQGQIFETYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGL 276 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRS 306 +VDGMD+ V+ A YCRA KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS Sbjct: 277 RVDGMDVLCVREAAKFAAEYCRAGKGPIVMELQTYRYHGHSMSDPGISYRTREEIQEVRS 336 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DPI ++ R+++N AS +LKEI++ VRK I + +FA +D EP EL + I Sbjct: 337 KSDPITLLKDRMINNNLASVEELKEIDVAVRKEIEEAAQFATTDPEPPLEELGNHIY 393 >gi|319652404|ref|ZP_08006520.1| dihydrolipoyl dehydrogenase E1 alpha subunit [Bacillus sp. 2_A_57_CT2] gi|317395866|gb|EFV76588.1| dihydrolipoyl dehydrogenase E1 alpha subunit [Bacillus sp. 2_A_57_CT2] Length = 331 Score = 361 bits (928), Expect = 8e-98, Method: Composition-based stats. Identities = 124/326 (38%), Positives = 192/326 (58%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 LE + +KE+ Y+ M+ IR+FE++ +L+ G++ GF HL G+EAV VG+ Sbjct: 4 LESSKDVALSKEKAQWMYQKMVEIRQFEDRVHELFAKGILPGFVHLYAGEEAVAVGVCAH 63 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L + D + + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +G Sbjct: 64 LNDKDSITSTHRGHGHCIAKGCDLDGMMAEIYGKVTGLCKGKGGSMHIADFDKGMLGANG 123 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG L G A KY+++D + V FGDGA N G +E N+AA+W L V++V ENN Sbjct: 124 IVGGGFPLACGSALTAKYKKTDNVSVCFFGDGAQNHGTFHEGINLAAIWKLPVVFVAENN 183 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 YA T S AS+ + R +++NIPG++VDG D+ AV ++AV R +GP +IE Sbjct: 184 GYAEATPFSYASSCKSIVDRAIAYNIPGIKVDGKDVLAVYQAAEEAVQRARRGEGPTLIE 243 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 +TYR GH D Y+ +E E + + D I R LL+ + +E +++ IE +V Sbjct: 244 CVTYRNYGHFEGDAQTYKADQEKAEHKQDKDAILLFRNHLLNEQLLAESEVEAIEESVEA 303 Query: 339 IINNSVEFAQSDKEPDPAELYSDILI 364 +N +V+F++ P+ +EL +D+ + Sbjct: 304 AVNQAVKFSEESPYPNASELLTDVYV 329 >gi|329889605|ref|ZP_08267948.1| pyruvate dehydrogenase acetyl-transferring E1 component, alpha subunit [Brevundimonas diminuta ATCC 11568] gi|328844906|gb|EGF94470.1| pyruvate dehydrogenase acetyl-transferring E1 component, alpha subunit [Brevundimonas diminuta ATCC 11568] Length = 342 Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats. Identities = 198/346 (57%), Positives = 255/346 (73%), Gaps = 9/346 (2%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 +A++ + S+ D + + +KE L YR M+LIRRFEE+AGQLYGMG++G Sbjct: 3 KAAAQKNSPSAGDKI-------PNTPQASKEDLLRFYREMVLIRRFEERAGQLYGMGLIG 55 Query: 80 GFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISK 138 GFCHL IGQEAV VG++ S+ +G D++IT YR+HGH+L G+D ++MAELTGR GG SK Sbjct: 56 GFCHLYIGQEAVAVGVQESVKQGYDKIITGYRDHGHMLVAGMDPKEVMAELTGRIGGSSK 115 Query: 139 GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 GKGGSMHMF GFYGGHGIVGAQV+LGTG+AFA KYR D + V FGDGA+NQGQVY Sbjct: 116 GKGGSMHMFDVPTGFYGGHGIVGAQVALGTGLAFAGKYRGDDSVSFVYFGDGASNQGQVY 175 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 ESFN+A LW L IY+IENNQYAMGTS+ R+S+ T +RG SF IPG QVDGMD+ AV+ Sbjct: 176 ESFNMAQLWKLPAIYIIENNQYAMGTSIERSSSTTELYQRGASFGIPGEQVDGMDVLAVR 235 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 +AVA RA +GP I+E+ TYRYRGHSMSDPA YRT+EE++E++ DPI+ + K L Sbjct: 236 DAAARAVARARAGEGPYILEVKTYRYRGHSMSDPAKYRTKEEVDEVKKTRDPIDHL-KML 294 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 L A+E +LK I+ V+ I+ +V+FAQ EPD +ELY+D+ + Sbjct: 295 LAAAKATEDELKAIDNEVKAIVAEAVQFAQESPEPDASELYTDVYV 340 >gi|255003907|ref|ZP_05278708.1| pyruvate dehydrogenase E1 component, alpha subunit precursor (pdhA) [Anaplasma marginale str. Virginia] Length = 364 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 171/310 (55%), Positives = 226/310 (72%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + EQ + +Y MLL+RRFEEK GQLYGMG++ GFCHL IGQEA+ VG++ L+ D ++ Sbjct: 55 ISDEQVVKSYHDMLLMRRFEEKVGQLYGMGLIRGFCHLYIGQEAIAVGLQNVLSSEDSIV 114 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YREHG +L G A+ I+AEL G++ G SKGKGGSMHMF+ F+GGHGIVGAQV + Sbjct: 115 TSYREHGFMLTSGESANTILAELMGKRTGCSKGKGGSMHMFNVAKNFFGGHGIVGAQVPI 174 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTGIAFA +Y++ + C GDGA NQGQVYESFN+A+LW L V+YV+ENN+YAMGTSV Sbjct: 175 GTGIAFAEQYKKGRGVVFTCLGDGAMNQGQVYESFNMASLWKLPVVYVVENNEYAMGTSV 234 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+S+ +RG +PG QVDGMDI AV A CR GP+++EM TYR+RG Sbjct: 235 PRSSSVVELYRRGEGCGVPGSQVDGMDIFAVIEAASNAAELCRNGNGPVLLEMKTYRFRG 294 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTR+E++E+R + DP+ ++++ +L +K A E L E VR+I+N +VEF Sbjct: 295 HSMSDPAKYRTRQEVDEVRDSKDPLCRLKEYVLKHKIAPESTLDGFEKQVREIVNGAVEF 354 Query: 347 AQSDKEPDPA 356 AQ+ EP+ A Sbjct: 355 AQNSPEPEVA 364 >gi|229110225|ref|ZP_04239799.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock1-15] gi|228673211|gb|EEL28481.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock1-15] Length = 332 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 183/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAATEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ PD EL D+ + Sbjct: 311 FSENSPYPDDEELLKDVYV 329 >gi|300770262|ref|ZP_07080141.1| pyruvate dehydrogenase complex E1 component alpha subunit [Sphingobacterium spiritivorum ATCC 33861] gi|300762738|gb|EFK59555.1| pyruvate dehydrogenase complex E1 component alpha subunit [Sphingobacterium spiritivorum ATCC 33861] Length = 331 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 161/320 (50%), Positives = 209/320 (65%), Gaps = 1/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + KE L Y+ MLL+R+FEEKAGQLYG + GFCHL IGQEAV+ G + D Sbjct: 4 TPITKETYLEWYKSMLLMRKFEEKAGQLYGQQKIRGFCHLYIGQEAVVAGTMSVIGPEDS 63 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR+H H LA GV A MAEL G+ G SKGKGGSMH FS ++ F GGHGIVG Q+ Sbjct: 64 LITAYRDHAHALAKGVSADACMAELYGKATGCSKGKGGSMHFFSKEHKFMGGHGIVGGQI 123 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG GIAFA Y + + V GDGA QG E+ N+A LW L VI+V ENN YAMGT Sbjct: 124 PLGAGIAFAEMYNGTKNVNVCYMGDGAVRQGAFNETLNMAMLWKLPVIFVCENNGYAMGT 183 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R + + K G F++P VDGMD+ AV MD+AV RA +GP +E+ TYRY Sbjct: 184 SVQRTTNMIDIYKMGHGFDMPSAAVDGMDVVAVHNAMDEAVQRARAGEGPTFLEIRTYRY 243 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +GHSMSDPA YRT+EE+ E DP+ + +L NK+A + E+E +V+K++ +SV Sbjct: 244 KGHSMSDPAKYRTKEELEEY-KGRDPLLSTKHAILENKYADDAWFAEVEADVKKVVEDSV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FA+ PD +E+Y+D+ + Sbjct: 303 KFAEESPYPDASEIYNDVYV 322 >gi|51473458|ref|YP_067215.1| pyruvate decarboxylase [Rickettsia typhi str. Wilmington] gi|81610813|sp|Q68XA9|ODPA_RICTY RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|51459770|gb|AAU03733.1| Pyruvate decarboxylase [Rickettsia typhi str. Wilmington] Length = 326 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 166/315 (52%), Positives = 227/315 (72%), Gaps = 1/315 (0%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 E+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI +++ +GD IT+Y Sbjct: 13 EEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVELIKKKGDSTITSY 72 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R+H HI+ G + ++AEL GR G SKGKGGSMH+F N FYGGHGIVGAQV +GTG Sbjct: 73 RDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKFYGGHGIVGAQVPIGTG 132 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +AFA KY ++ IC GDGA NQGQVYE+FN+A+LW L V+Y+IENN+Y+MGTSVSR+ Sbjct: 133 LAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMASLWGLPVVYIIENNEYSMGTSVSRS 192 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + K+G SF I G Q+DGMD + + Y R + P+I+E+ TYRYRGHSM Sbjct: 193 TFMRDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSM 252 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 SDPA YR++EE+ + D + ++R+ +L NK+A+E DLK IE +V+++I +VEF+++ Sbjct: 253 SDPAKYRSKEEVAKY-KERDTLVRIRQIILDNKYATEEDLKAIERSVQEVIKVAVEFSEN 311 Query: 350 DKEPDPAELYSDILI 364 P ELY+DI + Sbjct: 312 SPLPSEDELYTDIYV 326 >gi|3089612|gb|AAC70361.1| pyruvate dehydrogenase alpha subunit [Zymomonas mobilis subsp. mobilis ZM4] Length = 353 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 185/352 (52%), Positives = 249/352 (70%), Gaps = 5/352 (1%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLY 73 K + + K S++ D+P + G ++ +E+ L YR ML+IRRFEE+ GQLY Sbjct: 3 KATQDSNRPHKADVGSAIPNHDLPPIPGRYHAD--REELLEFYRRMLMIRRFEERCGQLY 60 Query: 74 GMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGR 132 G+G++ GF HL IGQEAV VG++ +L G D +IT YREHGH+LA G+D +MAELTGR Sbjct: 61 GLGLIAGFNHLYIGQEAVAVGLQAALQPGRDSVITGYREHGHMLAYGIDPKIVMAELTGR 120 Query: 133 QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAA 192 GIS GKGGSMHMFST++ F+GG+GIVGAQV LG G+AFA+KYR FGDG+A Sbjct: 121 ASGISHGKGGSMHMFSTEHKFFGGNGIVGAQVPLGAGLAFAHKYRNDGGCSAAYFGDGSA 180 Query: 193 NQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 NQGQVYE++N+AALW L VI+VIENN YAMGTS+ RA+A T S+RG F IP + VDGM Sbjct: 181 NQGQVYEAYNMAALWKLPVIFVIENNGYAMGTSIQRANAHTALSERGAGFGIPALVVDGM 240 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIE 312 D+ V+ AV + +A KGPII+EM TYRYRGHSMSDPA YR+REE+N+M+ NHDP++ Sbjct: 241 DVLEVRGAATVAVDWVQAGKGPIILEMKTYRYRGHSMSDPARYRSREEVNDMKENHDPLD 300 Query: 313 QVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 ++K L E +L +++ ++R+ + + +FA+ P ELY++IL+ Sbjct: 301 NLKKDLFA--GVPEAELVKLDEDIRQQVKEAADFAEKAPLPADEELYTNILV 350 >gi|119364627|sp|P26284|ODPA_RAT RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor Length = 390 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 182/370 (49%), Positives = 239/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKR----AATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G + + + A R AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLAGAAQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 124 TFNRGHAVRAILAELTGRRGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 181 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 182 KYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 241 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP Sbjct: 242 YYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGV 299 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 Query: 354 DPAELYSDIL 363 EL I Sbjct: 360 PLEELGYHIY 369 >gi|227538733|ref|ZP_03968782.1| pyruvate dehydrogenase [Sphingobacterium spiritivorum ATCC 33300] gi|227241242|gb|EEI91257.1| pyruvate dehydrogenase [Sphingobacterium spiritivorum ATCC 33300] Length = 331 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 161/320 (50%), Positives = 209/320 (65%), Gaps = 1/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + KE L Y+ MLL+R+FEEKAGQLYG + GFCHL IGQEAV+ G + D Sbjct: 4 TPITKETYLEWYKSMLLMRKFEEKAGQLYGQQKIRGFCHLYIGQEAVVAGTMSVIGPEDS 63 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR+H H LA GV A MAEL G+ G SKGKGGSMH FS ++ F GGHGIVG Q+ Sbjct: 64 LITAYRDHAHALAKGVSADACMAELYGKATGCSKGKGGSMHFFSKEHKFMGGHGIVGGQI 123 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG GIAFA Y + + V GDGA QG E+ N+A LW L VI+V ENN YAMGT Sbjct: 124 PLGAGIAFAEMYNGTKNVNVCYMGDGAVRQGAFNETLNMAMLWKLPVIFVCENNGYAMGT 183 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R + + K G F++P VDGMD+ AV MD+AV RA +GP +E+ TYRY Sbjct: 184 SVQRTTNMIDIYKMGHGFDMPSAAVDGMDVVAVHNAMDEAVQRARAGEGPTFLEIRTYRY 243 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +GHSMSDPA YRT+EE+ E DP+ + +L NK+A + E+E +V+K++ +SV Sbjct: 244 KGHSMSDPAKYRTKEELEEY-KGRDPLLSTKHAILENKYADDAWFAEVEADVKKVVEDSV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FA+ PD +E+Y+D+ + Sbjct: 303 KFAEESPYPDASEIYNDVYV 322 >gi|15604131|ref|NP_220646.1| pyruvate dehydrogenase E1 component, alpha subunit precursor (pdhA) [Rickettsia prowazekii str. Madrid E] gi|7674154|sp|Q9ZDR4|ODPA_RICPR RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|3860823|emb|CAA14723.1| PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT PRECURSOR (pdhA) [Rickettsia prowazekii] gi|292571859|gb|ADE29774.1| Pyruvate dehydrogenase e1 component, alpha subunit precursor [Rickettsia prowazekii Rp22] Length = 326 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 167/316 (52%), Positives = 227/316 (71%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE+ + +++ MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M +GD IT+ Sbjct: 12 KEEYIKSFKDMLLLRRFEEKCGQLYGMGKIGGFCHLYIGQEAVISAVAMIKKKGDSTITS 71 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+H HI+ G + ++AEL GR G SKGKGGSMH+F N FYGGHGIVGAQV +GT Sbjct: 72 YRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKFYGGHGIVGAQVPIGT 131 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+AFA KY ++ IC GDGA NQGQVYE+FN+A+LW L ++Y+IENN+Y+MGTSV+R Sbjct: 132 GLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMASLWGLPIVYIIENNEYSMGTSVAR 191 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++ + K+G SF I G Q+DGMD + + Y R + P+I+E+ TYRYRGHS Sbjct: 192 STFMCDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHS 251 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YR++EE+ + D + ++R+ +L NK+A+E DLK IE +VR+II +VEF++ Sbjct: 252 MSDPAKYRSKEEVEKY-KERDTLVRIREIILDNKYATEADLKAIEQSVREIIKVAVEFSE 310 Query: 349 SDKEPDPAELYSDILI 364 + P ELY++I + Sbjct: 311 NSPLPAEDELYTEIYV 326 >gi|255037635|ref|YP_003088256.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Dyadobacter fermentans DSM 18053] gi|254950391|gb|ACT95091.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Dyadobacter fermentans DSM 18053] Length = 343 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 161/319 (50%), Positives = 214/319 (67%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + KEQ + + MLL RRFEEK+GQLYG + GFCHL IGQEA G +L +GD+ Sbjct: 17 QHPKEQYMFWFENMLLQRRFEEKSGQLYGQQKIRGFCHLYIGQEACSSGAVSALKKGDKY 76 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+HG LA G + IMAEL G++ G +KGKGGSMH+F + GF GGHGIVG Q+ Sbjct: 77 ITAYRDHGIPLALGTSPNAIMAELYGKKTGTTKGKGGSMHIFDKEVGFIGGHGIVGGQIP 136 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY ++D +C+ FGDGA QG +E+ N+A W L VI+V+ENN YAMGTS Sbjct: 137 LGAGIAFAEKYNKTDNLCICYFGDGAIRQGSFHETLNMAMSWKLPVIFVVENNGYAMGTS 196 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V+R S T G +++IP VDGM + A+ + +A R +GP +E TYRYR Sbjct: 197 VARTSNVTELYTLGEAYDIPSEPVDGMSVEAIHEAVSRAAERARKGEGPTFLEFRTYRYR 256 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDP YR++EE+ E + DPIEQ+R +L NK A+E +L I+ V++I+ SV+ Sbjct: 257 GHSMSDPQKYRSKEEVEEY-KHRDPIEQIRAVILENKLATEEELDNIDKKVKEIVAESVQ 315 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ + PDP E Y+D+ + Sbjct: 316 FAEESEWPDPKEAYTDVYV 334 >gi|281352954|gb|EFB28538.1| hypothetical protein PANDA_001830 [Ailuropoda melanoleuca] Length = 353 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 173/335 (51%), Positives = 229/335 (68%), Gaps = 7/335 (2%) Query: 32 DCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQE 89 D+ LE G V+ +E L YR+M +RR E KA QLY ++ GFCHLC GQE Sbjct: 2 QKCDLHRLEEGPPVTTVLTREDGLRYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQE 61 Query: 90 AVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFST 149 A VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGKGGSMHM+ Sbjct: 62 ACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRRGGCAKGKGGSMHMY-- 119 Query: 150 KNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNL 209 FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E++N+AALW L Sbjct: 120 AKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKL 179 Query: 210 NVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCR 269 I++ ENN+Y MGTSV RA+A T++ KRG IPG++VDGMDI V+ A A+CR Sbjct: 180 PCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATRFAAAHCR 237 Query: 270 AHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 + KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++++ AS + Sbjct: 238 SGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEE 297 Query: 329 LKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 LKEI++ VRK I ++ +FA +D EP EL I Sbjct: 298 LKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIY 332 >gi|60302740|ref|NP_001012562.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial [Gallus gallus] gi|60098555|emb|CAH65108.1| hypothetical protein RCJMB04_3l20 [Gallus gallus] Length = 399 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 177/364 (48%), Positives = 238/364 (65%), Gaps = 7/364 (1%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSE--FNKEQELSAYRLML 60 VA T + +A AT + D+ LE + +E+ L Y+ M Sbjct: 17 VAAAGRTASRVMVASRNYADFANEATFEIKPCDLHRLEEGPATTAVLTREEGLHYYKTMQ 76 Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 IRR E K+ QLY ++ GFCHL GQEA VG+++++ D +ITAYR HG A GV Sbjct: 77 TIRRMELKSDQLYKQKIIRGFCHLYDGQEACCVGLEVAIKPTDHVITAYRAHGFTYARGV 136 Query: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 +I+AELTGR+GG +KGKGGSMHM++ FYGG+GIVGAQV LG GIA A KY + Sbjct: 137 PVREILAELTGRKGGCAKGKGGSMHMYTK--NFYGGNGIVGAQVPLGAGIALACKYFGKN 194 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 ++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG Sbjct: 195 EVCLTLYGDGAANQGQIFETYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGD 254 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTRE 299 IPG++VDGMD+ V+ A YCRA KGPI++E+ TYRY GHSMSDP +YRTRE Sbjct: 255 F--IPGLRVDGMDVLCVREAAKFAAEYCRAGKGPIVMELQTYRYHGHSMSDPGISYRTRE 312 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 EI E+RS DPI ++ R+++N AS +LKEI++ VRK I + +FA +D EP EL Sbjct: 313 EIQEVRSKSDPITLLKDRMINNNLASVEELKEIDVAVRKEIEEAAQFATTDPEPPLEELG 372 Query: 360 SDIL 363 + I Sbjct: 373 NHIY 376 >gi|16125970|ref|NP_420534.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase subunit alpha [Caulobacter crescentus CB15] gi|221234736|ref|YP_002517172.1| pyruvate dehydrogenase E1 component subunit alpha [Caulobacter crescentus NA1000] gi|13423142|gb|AAK23702.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Caulobacter crescentus CB15] gi|220963908|gb|ACL95264.1| pyruvate dehydrogenase E1 component alpha subunit [Caulobacter crescentus NA1000] Length = 343 Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 191/316 (60%), Positives = 247/316 (78%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K++ L Y+ MLLIRRFEE+AGQLYGMG++GGFCHL IGQEA+ VGM+ +GDQ+IT Sbjct: 25 KDELLKFYQDMLLIRRFEERAGQLYGMGLIGGFCHLYIGQEAIAVGMQSISQKGDQIITG 84 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HGH+LA G+D ++MAELTGR GG SKGKGGSMHMF GFYGGHGIVGAQV+LGT Sbjct: 85 YRDHGHMLAAGMDPREVMAELTGRAGGSSKGKGGSMHMFDIATGFYGGHGIVGAQVALGT 144 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A AN YR + + GDGAANQGQVYESFN+A LW L V+YVIENNQYAMGT+V R Sbjct: 145 GLALANSYRNNGNVSYAYMGDGAANQGQVYESFNMAQLWKLPVVYVIENNQYAMGTAVER 204 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 A+++T F KRGVSF IPG +VDGMD+ AV+ +A + R+ +GP I+EM TYRYRGHS Sbjct: 205 AASETAFHKRGVSFRIPGEEVDGMDVIAVREAGARATEHARSGQGPYILEMKTYRYRGHS 264 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YRT+EE++E+++ DPI+ +++RL +E DLK ++ V++I+ + EFA+ Sbjct: 265 MSDPAKYRTKEEVDEVKTTRDPIDHIKERLAKAGV-TEDDLKGVDAEVKRIVAEAAEFAR 323 Query: 349 SDKEPDPAELYSDILI 364 + EPDP+ELY+D+ + Sbjct: 324 TSPEPDPSELYTDVYL 339 >gi|229018088|ref|ZP_04174963.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH1273] gi|228743179|gb|EEL93304.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH1273] Length = 341 Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 184/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 20 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 79 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 80 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLNKGMLGANGIVGGGFP 139 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 140 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 199 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 200 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRNY 259 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+E Sbjct: 260 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEREVDDAVQKSIE 319 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 320 FSENSPYPEDEELLKDVYV 338 >gi|229139411|ref|ZP_04267982.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BDRD-ST26] gi|228643958|gb|EEL00219.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BDRD-ST26] Length = 341 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 128/318 (40%), Positives = 183/318 (57%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 21 ITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSIT 80 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 81 STHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFPL 140 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 141 ACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATTF 200 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR G Sbjct: 201 EYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRNYG 260 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H + Y+T EE E + D I RK L+H +E +L ++E V + + S+EF Sbjct: 261 HFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQKSIEF 320 Query: 347 AQSDKEPDPAELYSDILI 364 +++ P EL D+ + Sbjct: 321 SENSPYPKDEELLKDVYV 338 >gi|118478137|ref|YP_895288.1| acetoin dehydrogenase (TPP-dependent) E1 component subunit alpha [Bacillus thuringiensis str. Al Hakam] gi|118417362|gb|ABK85781.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Bacillus thuringiensis str. Al Hakam] Length = 341 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 186/319 (58%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y+ ML IR+FE+K +L+ GM+ GF HL G+EAV VG+ LT+ D + Sbjct: 20 EITKEQARWMYKKMLEIRKFEDKVHELFAQGMLPGFVHLYAGEEAVAVGVCAHLTDSDSI 79 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 80 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 139 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 140 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 199 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 200 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNY 259 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 260 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSIE 319 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 320 FSENSPYPEDEELLKDVYV 338 >gi|59042884|gb|AAW83831.1| E1 alpha subunit of pyruvate dehydrogenase [Petunia x hybrida] Length = 390 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 163/373 (43%), Positives = 230/373 (61%), Gaps = 12/373 (3%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATS--------SVDCVDIPFLEGFEVSEFNKEQE 52 M ++ TV L +VS R ++ S+ E N + Sbjct: 1 MALSTTRTTVSKFLKPLTTAVSTTRHLSTTNTLTIETSLPFTGHNIDPPSRTVETNPNEL 60 Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L+ ++ M +RR E A LY ++ GFCHL GQEAV +GM+ ++T+ D +ITAYR+H Sbjct: 61 LTFFKDMAEMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMESAITKKDCIITAYRDH 120 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 L+ G + +EL GR+ G SKGKGGSMH + +GFYGGHGIVGAQV LG G+AF Sbjct: 121 CIFLSRGGTLFECFSELMGRKDGCSKGKGGSMHFYKKDSGFYGGHGIVGAQVPLGIGLAF 180 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A KY + D + +GDGAANQGQ++E+ N+AALW+L I V ENN Y MGT+ RA+ Sbjct: 181 AQKYSKEDHVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKS 240 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 ++ KRG +PG++VDGMD AVK A + + GPII+EM TYRY GHSMSDP Sbjct: 241 PSYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKN-GPIILEMDTYRYHGHSMSDP 297 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 + YRTR+EI+ +R DPIE++RK +L + A+E +LK+IE RKI++ ++ A+ Sbjct: 298 GSTYRTRDEISGVRQERDPIERIRKLILAHDIATEKELKDIEKEKRKIVDEAIAKAKESA 357 Query: 352 EPDPAELYSDILI 364 PDP+EL++++ + Sbjct: 358 MPDPSELFTNVYV 370 >gi|229173426|ref|ZP_04300970.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus MM3] gi|228610120|gb|EEK67398.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus MM3] Length = 341 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 185/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 20 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 79 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 80 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 139 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 140 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 199 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 200 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRNY 259 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 260 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSIE 319 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 320 FSENSPYPEDEELLKDVYV 338 >gi|228915378|ref|ZP_04078971.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228844321|gb|EEM89379.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 341 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 185/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 20 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 79 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 80 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 139 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 140 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 199 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 200 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNY 259 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 260 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQKSIE 319 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 320 FSENSPYPEDEELLKDVYV 338 >gi|47227197|emb|CAG00559.1| unnamed protein product [Tetraodon nigroviridis] Length = 390 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 172/358 (48%), Positives = 236/358 (65%), Gaps = 7/358 (1%) Query: 9 TVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSE--FNKEQELSAYRLMLLIRRFE 66 +VG M+ AT + D+ L+ ++ +++ L YR+M +RR E Sbjct: 16 SVGAALMSSRSYADFTTQATFEIKKCDVYKLDEAPATQVVMTRDEGLQYYRIMQTMRRME 75 Query: 67 EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIM 126 KA QLY ++ GFCHL GQEA VG++ ++ D +ITAYR HG+ G +IM Sbjct: 76 LKADQLYKQKIIRGFCHLYDGQEACAVGIEAAINLTDHLITAYRAHGYTYTRGGTVKEIM 135 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 AELTGR+GGI+KGKGGSMHM+ FYGG+GIVGAQV LG G+A A KY +++CV Sbjct: 136 AELTGRRGGIAKGKGGSMHMYCK--HFYGGNGIVGAQVPLGAGVALACKYLGKNELCVAL 193 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPG 246 +GDGAANQGQ++E++N+AALW L I+V ENN+Y MGTSV RA+A T++ KRG IPG Sbjct: 194 YGDGAANQGQIFETYNMAALWKLPAIFVCENNRYGMGTSVERAAASTDYYKRGEF--IPG 251 Query: 247 MQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMR 305 ++VDGMD+ V+ A +CR+ KGPI++E+ TYRY GHSMSDP +YRTR+EI E+R Sbjct: 252 IRVDGMDVLCVREATKLAAEHCRSGKGPILMELQTYRYHGHSMSDPGVSYRTRDEIQEVR 311 Query: 306 SNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DPI ++ R+L N AS +LKEI++ VRK I ++ +FA +D EP +L + I Sbjct: 312 GKSDPISMLKDRMLSNNMASVEELKEIDVEVRKEIEDAAQFATTDPEPPLEDLCNHIF 369 >gi|228985868|ref|ZP_04146017.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229156352|ref|ZP_04284448.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus ATCC 4342] gi|228627227|gb|EEK83958.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus ATCC 4342] gi|228773903|gb|EEM22320.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 341 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 184/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 20 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 79 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 80 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 139 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 140 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 199 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 200 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRNY 259 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 260 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSIE 319 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P EL D+ + Sbjct: 320 FSENSPYPGDEELLKDVYV 338 >gi|196043641|ref|ZP_03110879.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus 03BB108] gi|225864751|ref|YP_002750129.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus 03BB102] gi|196025950|gb|EDX64619.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus 03BB108] gi|225788261|gb|ACO28478.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus 03BB102] Length = 332 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 186/319 (58%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y+ ML IR+FE+K +L+ GM+ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYKKMLEIRKFEDKVHELFAQGMLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 311 FSENSPYPEDEELLKDVYV 329 >gi|229024269|ref|ZP_04180728.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH1272] gi|228737044|gb|EEL87580.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH1272] Length = 332 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 184/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLNKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEREVDDAVQKSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 311 FSENSPYPEDEELLKDVYV 329 >gi|229030456|ref|ZP_04186496.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH1271] gi|228730895|gb|EEL81835.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH1271] Length = 332 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 185/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKVTGLCKGKGGSMHIADLNKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQKSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 311 FSENSPYPEDEELLKDVYV 329 >gi|65320075|ref|ZP_00393034.1| COG1071: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Bacillus anthracis str. A2012] Length = 341 Score = 358 bits (920), Expect = 7e-97, Method: Composition-based stats. Identities = 130/330 (39%), Positives = 189/330 (57%) Query: 35 DIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG 94 D+ + +E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG Sbjct: 9 DMLKTTESKENEITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVG 68 Query: 95 MKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 + LT+ D + + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G Sbjct: 69 VCAHLTDSDSITSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGML 128 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G +GIVG L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ Sbjct: 129 GANGIVGGGFPLACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFI 188 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ENN Y T+ AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP Sbjct: 189 AENNGYGEATTFEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGP 248 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 IIE +TYR GH + Y+T EE E + D I RK L+H +E +L ++E Sbjct: 249 TIIECMTYRNYGHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEK 308 Query: 335 NVRKIINNSVEFAQSDKEPDPAELYSDILI 364 V + + S+EF+++ P+ EL D+ + Sbjct: 309 AVDEAVQKSIEFSENSPYPEDEELLKDVYV 338 >gi|320167542|gb|EFW44441.1| pyruvate dehydrogenase E1 alpha 1 [Capsaspora owczarzaki ATCC 30864] Length = 389 Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats. Identities = 167/317 (52%), Positives = 224/317 (70%), Gaps = 5/317 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ L YR M +IRR E AG LY + GFCHL GQEAV G++ ++T+ D +IT Sbjct: 56 TKEELLDYYRTMQVIRRMETAAGDLYKSKFIRGFCHLYSGQEAVCTGVEAAITKEDSVIT 115 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG GV ++AELTGRQGG +KGKGGSMHM++ + F+GG+GIVGAQV LG Sbjct: 116 AYRAHGFTYVRGVSVKGVLAELTGRQGGCAKGKGGSMHMYN--HNFFGGNGIVGAQVPLG 173 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIA A++Y+ + K+C+ +GDGAANQGQ++E++N+AALW L I++ ENNQY MGT++ Sbjct: 174 AGIALAHQYQGNKKVCISLYGDGAANQGQIFEAYNMAALWKLPAIFICENNQYGMGTAIG 233 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RA+A T + RG IPG++V+GMD+ AV+ AV + RA KGP ++EM+TYRY GH Sbjct: 234 RAAASTEYYTRGDY--IPGIKVNGMDVLAVREATKFAVDHARAGKGPFVLEMITYRYGGH 291 Query: 288 SMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP YR+REEI +MRSN+DPI V+ RLL A+ +LKEI+ VRK ++ +VEF Sbjct: 292 SMSDPGTSYRSREEIQQMRSNNDPINNVKNRLLSTNLATAEELKEIDQAVRKEVDEAVEF 351 Query: 347 AQSDKEPDPAELYSDIL 363 A+ D E E Y+D+ Sbjct: 352 AKEDAELPVEEAYTDVY 368 >gi|308509166|ref|XP_003116766.1| hypothetical protein CRE_02025 [Caenorhabditis remanei] gi|308241680|gb|EFO85632.1| hypothetical protein CRE_02025 [Caenorhabditis remanei] Length = 415 Score = 358 bits (919), Expect = 9e-97, Method: Composition-based stats. Identities = 171/362 (47%), Positives = 223/362 (61%), Gaps = 6/362 (1%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS-EFNKEQELSAYRLMLLI 62 Q +T G I+ S+ + + C G S NKE L YR M +I Sbjct: 24 QIQSLTAGGIRTQQVRLASSTEVSFHTKPCKLHKLDSGPNTSVTLNKEDALKYYRDMQVI 83 Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR E AG LY + GFCHL GQEA VGMK ++TEGD +ITAYR HG G Sbjct: 84 RRMESAAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMTEGDAVITAYRCHGWTWLLGATV 143 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 ++++AELTGR G GKGGSMHM++ FYGG+GIVGAQ LG G+A A KYR + Sbjct: 144 TEVLAELTGRIAGNVHGKGGSMHMYTK--NFYGGNGIVGAQQPLGAGVALAMKYREQKNV 201 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 CV +GDGAANQGQ++E+ N+A LW+L V++V ENN + MGT+V RASA T + RG Sbjct: 202 CVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMGTAVERASASTEYYTRGDY- 260 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEI 301 +PG+ VDGMDI AV+ A YC + KGP+++EM TYRY GHSMSDP YR+REEI Sbjct: 261 -VPGIWVDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYHGHSMSDPGTSYRSREEI 319 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 E+R DPI + R++ + A+E +LK I+ VRK ++ +++ A SD P LY+D Sbjct: 320 QEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEALKIATSDGVLPPEALYTD 379 Query: 362 IL 363 I Sbjct: 380 IY 381 >gi|229091778|ref|ZP_04222977.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-42] gi|228691560|gb|EEL45314.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-42] Length = 341 Score = 358 bits (919), Expect = 9e-97, Method: Composition-based stats. Identities = 128/319 (40%), Positives = 183/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 20 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 79 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 80 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 139 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 140 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 199 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 200 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNY 259 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE + D I RK L+H +E +L ++E V + S+E Sbjct: 260 GHFEGEAQTYKTSEEKEAHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDDAVQKSIE 319 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 320 FSENSPYPEDEELLKDVYV 338 >gi|229184994|ref|ZP_04312184.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BGSC 6E1] gi|228598469|gb|EEK56099.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BGSC 6E1] Length = 341 Score = 358 bits (918), Expect = 9e-97, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 186/319 (58%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y+ ML IR+FE+K +L+ GM+ GF HL G+EAV VG+ LT+ D + Sbjct: 20 EITKEQARWMYKKMLEIRKFEDKVHELFAQGMLPGFVHLYAGEEAVAVGVCAHLTDSDSI 79 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 80 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 139 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 140 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 199 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 200 FEYASSCDSIAARAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNY 259 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 260 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSIE 319 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 320 FSENSPYPEDEELLKDVYV 338 >gi|229196948|ref|ZP_04323688.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus m1293] gi|228586505|gb|EEK44583.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus m1293] Length = 341 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 128/318 (40%), Positives = 184/318 (57%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 21 ITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSIT 80 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 81 STHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFPL 140 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 141 ACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATTF 200 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR G Sbjct: 201 EYASSCDSIADRARAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRNYG 260 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H + Y+T EE E + D I RK L+H +E +L ++E V + + S+EF Sbjct: 261 HFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQKSIEF 320 Query: 347 AQSDKEPDPAELYSDILI 364 +++ P+ EL D+ + Sbjct: 321 SENSPYPEDEELLKDVYV 338 >gi|206973622|ref|ZP_03234540.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus H3081.97] gi|217960215|ref|YP_002338775.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus AH187] gi|222096277|ref|YP_002530334.1| tpp-dependent acetoin dehydrogenase e1 alpha-subunit [Bacillus cereus Q1] gi|206747778|gb|EDZ59167.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus H3081.97] gi|217064447|gb|ACJ78697.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus AH187] gi|221240335|gb|ACM13045.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus Q1] gi|324326743|gb|ADY22003.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus thuringiensis serovar finitimus YBT-020] Length = 332 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 128/318 (40%), Positives = 184/318 (57%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 12 ITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSIT 71 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 72 STHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFPL 131 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 132 ACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATTF 191 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR G Sbjct: 192 EYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRNYG 251 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H + Y+T EE E + D I RK L+H +E +L ++E V + + S+EF Sbjct: 252 HFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQKSIEF 311 Query: 347 AQSDKEPDPAELYSDILI 364 +++ P+ EL D+ + Sbjct: 312 SENSPYPEDEELLKDVYV 329 >gi|149234441|ref|XP_001523100.1| pyruvate dehydrogenase E1 component [Lodderomyces elongisporus NRRL YB-4239] gi|146453209|gb|EDK47465.1| pyruvate dehydrogenase E1 component [Lodderomyces elongisporus NRRL YB-4239] Length = 409 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 160/366 (43%), Positives = 222/366 (60%), Gaps = 18/366 (4%) Query: 10 VGDIKMALNPSVSAKRAATSSVDCVDIP--FLEGF--EVSEFN----KEQELSAYRLMLL 61 + L S + +S + VD+P EG+ EV E KE L Y+ M++ Sbjct: 22 TSQLTRTLATSAT---PDSSDLVTVDLPKSSFEGYNLEVPELEFETEKETLLQMYKDMIV 78 Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 IRR E + LY + GFCHL IGQEAV VG++ ++ D +IT+YR HG G Sbjct: 79 IRRMEMASDALYKAKKIRGFCHLSIGQEAVAVGIENAIGPKDTVITSYRCHGFAHMRGAS 138 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 I+AEL GR+ G+S GKGGSMHMF+ GFYGG+GIVGAQV LG G+AF++KY+ Sbjct: 139 VKSILAELMGRRSGVSYGKGGSMHMFAP--GFYGGNGIVGAQVPLGAGLAFSHKYKGEKA 196 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 + +GDGA+NQGQV+ES+N+A LWNL I+V ENN+Y MGTS +R+SA T + KRG Sbjct: 197 VNFCLYGDGASNQGQVFESYNMAKLWNLPCIFVCENNKYGMGTSAARSSAMTEYYKRGQY 256 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREE 300 IPG++++GMD+ A A + GP+++E TYRY GHSMSDP YRTREE Sbjct: 257 --IPGLKINGMDVLACYQGSKFAKDWATQGNGPLVVEFETYRYGGHSMSDPGTTYRTREE 314 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AEL 358 + MRS DPI ++ LL A+E ++K+ + RK ++ V A++D P+ L Sbjct: 315 VQHMRSKSDPIAGLKAVLLEKNIATEEEIKKYDKAARKYVDEQVAEAEADAPPEARMDIL 374 Query: 359 YSDILI 364 + D+ + Sbjct: 375 FEDVYV 380 >gi|228934052|ref|ZP_04096893.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228946385|ref|ZP_04108707.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813311|gb|EEM59610.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228825566|gb|EEM71358.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 341 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 184/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 20 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 79 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 80 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 139 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 140 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 199 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 200 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNY 259 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 260 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSIE 319 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P EL D+ + Sbjct: 320 FSENSPYPGDEELLKDVYV 338 >gi|114768960|ref|ZP_01446586.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [alpha proteobacterium HTCC2255] gi|114549877|gb|EAU52758.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [alpha proteobacterium HTCC2255] Length = 329 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 186/319 (58%), Positives = 242/319 (75%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + ++ YR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VG++ + EGD Sbjct: 11 NISADELHKYYREMLLIRRFEEKAGQLYGMGHIGGFCHLYIGQEAVVVGLEAAAKEGDSR 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +T+YR+H H+LACG+D +MAELTGR+ G+SKGKGGSMHMFS + FYGGHGIV AQV Sbjct: 71 LTSYRDHAHMLACGLDPKGVMAELTGRKDGLSKGKGGSMHMFSKEKKFYGGHGIVAAQVP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+A ANKYR D + FGDGAANQGQVYESFN+AALW L VI+V+ENN+YAMGTS Sbjct: 131 IGAGLALANKYRGEDTVTFTYFGDGAANQGQVYESFNMAALWKLPVIFVVENNRYAMGTS 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + RA++ +F RG +F I G VDGMD+ AVKA + AV +CRA GP ++E+ TYRYR Sbjct: 191 LQRAASTPDFYTRGEAFGIAGAVVDGMDVLAVKAAGELAVEHCRAGNGPFVLEVKTYRYR 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDPA YR++EE+ ++ N DPI+ V++ L+ +++ DLK I+ +++KI+ S + Sbjct: 251 GHSMSDPARYRSKEEVKNVKDNQDPIDMVKEMLIQGGHSTQDDLKIIDKDIKKIVQESAD 310 Query: 346 FAQSDKEPDPAELYSDILI 364 FA + EPD ELY+DIL+ Sbjct: 311 FAIASPEPDLNELYTDILV 329 >gi|229012033|ref|ZP_04169212.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus mycoides DSM 2048] gi|229167400|ref|ZP_04295138.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH621] gi|228615962|gb|EEK73049.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH621] gi|228749121|gb|EEL98967.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus mycoides DSM 2048] Length = 341 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 128/319 (40%), Positives = 185/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 20 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 79 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 80 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 139 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 140 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 199 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP +IE +TYR Sbjct: 200 FEYASSCNSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTLIECMTYRNY 259 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 260 GHFEGEAQTYKTAEEKEEHLNEKDAIVHFRKHLIHEALLTESELVDMEKAVDEAVQKSIE 319 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 320 FSENSPYPEDEELLKDVYV 338 >gi|30262748|ref|NP_845125.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Ames] gi|47528068|ref|YP_019417.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49185595|ref|YP_028847.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Sterne] gi|165869114|ref|ZP_02213774.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0488] gi|167632100|ref|ZP_02390427.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0442] gi|167637912|ref|ZP_02396191.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0193] gi|170685404|ref|ZP_02876628.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0465] gi|170704617|ref|ZP_02895083.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0389] gi|177649295|ref|ZP_02932297.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0174] gi|190565430|ref|ZP_03018350.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis Tsiankovskii-I] gi|227814412|ref|YP_002814421.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. CDC 684] gi|229602309|ref|YP_002867055.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0248] gi|254685340|ref|ZP_05149200.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. CNEVA-9066] gi|254722748|ref|ZP_05184536.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A1055] gi|254737796|ref|ZP_05195499.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Western North America USA6153] gi|254743030|ref|ZP_05200715.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Kruger B] gi|254752110|ref|ZP_05204147.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Vollum] gi|254760631|ref|ZP_05212655.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Australia 94] gi|30257380|gb|AAP26611.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Ames] gi|47503216|gb|AAT31892.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49179522|gb|AAT54898.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. Sterne] gi|164715840|gb|EDR21357.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0488] gi|167514461|gb|EDR89828.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0193] gi|167532398|gb|EDR95034.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0442] gi|170130418|gb|EDS99279.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0389] gi|170670764|gb|EDT21503.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0465] gi|172084369|gb|EDT69427.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0174] gi|190563457|gb|EDV17422.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis Tsiankovskii-I] gi|227005811|gb|ACP15554.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. CDC 684] gi|229266717|gb|ACQ48354.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus anthracis str. A0248] Length = 332 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 185/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQKSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 311 FSENSPYPEDEELLKDVYV 329 >gi|269837961|ref|YP_003320189.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sphaerobacter thermophilus DSM 20745] gi|269787224|gb|ACZ39367.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Sphaerobacter thermophilus DSM 20745] Length = 336 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 134/327 (40%), Positives = 199/327 (60%), Gaps = 3/327 (0%) Query: 39 LEGFEVSEFN--KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 +G + K+ L YR M+ IR+FEE+A + Y G +GGF HL IG+EA+ VG Sbjct: 4 PDGSRTKDLTLGKDDLLHLYRQMVAIRKFEERAAEQYAHGKIGGFLHLYIGEEAIAVGAI 63 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 ++ E D ++T YR+HG+ +A G D +MAEL GR G++ G+GGSMH + F+GG Sbjct: 64 DAMEERDHVVTHYRDHGYAIALGTDPRLLMAELFGRSTGVAGGRGGSMHFADAERNFWGG 123 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + IV + + G+A A++Y D + + FGDGA N G +E+ N A+LW L V+++ E Sbjct: 124 YAIVAGHLPIAAGLALASQYLEQDYVVLCFFGDGATNNGAFHEALNFASLWKLPVLFICE 183 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NNQY MGT+V ASA +K+ +++IP ++DG D+ V+ + KA+ +CRA GP Sbjct: 184 NNQYGMGTAVEYASAVREMAKKATAYDIPSERIDGQDVLEVREAVKKALDHCRAGNGPYF 243 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 IE +TYR+RGHSM+DP YRT+EE+ + R DPI + R +LL A+E +L I+ V Sbjct: 244 IEAMTYRFRGHSMADPEAYRTKEEVEKWRQE-DPILRFRGKLLAEGVATEDELNAIDSEV 302 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 + +V FA PDP+ L + Sbjct: 303 DAQMEEAVRFADESPVPDPSTLTKHVY 329 >gi|282857205|ref|ZP_06266449.1| pyruvate dehydrogenase E1 component subunit alpha [Pyramidobacter piscolens W5455] gi|282584991|gb|EFB90315.1| pyruvate dehydrogenase E1 component subunit alpha [Pyramidobacter piscolens W5455] Length = 319 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 123/318 (38%), Positives = 183/318 (57%), Gaps = 1/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + KE+ L YR M +IR FE KA +L+ G + GF HL +G+EAV G+ +L +GD + Sbjct: 2 KVTKEKLLDMYRTMFMIRSFELKAAELFAAGRIPGFVHLYVGEEAVATGVCANLKKGDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH+LA G D + +MAEL G+ G KGKGGSMH+ G G +GIVGA Sbjct: 62 TSTHRGHGHLLAKGGDVNLMMAELFGKASGYCKGKGGSMHIADVDLGILGANGIVGAGFP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G AF+ KYR++ + V FGD A+N+G +E N A++ L V++V ENN Y + Sbjct: 122 IAVGAAFSCKYRKTGDVTVCFFGDAASNRGTFHEGINFASIHKLPVVFVCENNMYGISNY 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + R + IPG VDG D+ AV A+ R GP +IE T+R R Sbjct: 182 QKAGMNINDIADRSEGYGIPGASVDGNDVMAVYEAASAAIENARKGDGPSLIECKTWRQR 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP Y+ EE + DP+ ++ KRL +AS+ +L+ ++ + + I +V+ Sbjct: 242 GHFEGDPGKYKDPEEQKNWVAK-DPLPRLEKRLEELGYASKDELEAMQKEILQRIEAAVQ 300 Query: 346 FAQSDKEPDPAELYSDIL 363 FA+S +P P+EL +D+L Sbjct: 301 FAESGPDPSPSELLTDVL 318 >gi|300118738|ref|ZP_07056464.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Bacillus cereus SJ1] gi|298723895|gb|EFI64611.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Bacillus cereus SJ1] Length = 332 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 184/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDDAVQKSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 311 FSENSPYPEDEELLKDVYV 329 >gi|327404741|ref|YP_004345579.1| pyruvate dehydrogenase E1 component subunit alpha [Fluviicola taffensis DSM 16823] gi|327320249|gb|AEA44741.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Fluviicola taffensis DSM 16823] Length = 350 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 163/352 (46%), Positives = 216/352 (61%), Gaps = 14/352 (3%) Query: 12 DIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQ 71 K A PS + ++A S S+F+KE + Y+ MLL+RRFEEKAGQ Sbjct: 2 ATKTASKPSKTTTKSAAKS-------------TSKFSKETYIKWYKDMLLMRRFEEKAGQ 48 Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTG 131 LY GGFCHL IGQEA++ G + D +TAYR+H H + G D +MAEL G Sbjct: 49 LYIQQKFGGFCHLYIGQEAIVAGTVSASKPTDSHMTAYRDHAHPIGLGTDVRVLMAELYG 108 Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 R G SKGKGGSMH F + F GGHGIVGAQ+ +GTG+AFA +Y +D + V GDGA Sbjct: 109 RSTGCSKGKGGSMHFFDKEKNFMGGHGIVGAQIPMGTGVAFAEQYNGTDNVVFVSMGDGA 168 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 QG ++E+FN+A W L VIY+IENN YAMGTSV R + T+ SK G S+ +P V+G Sbjct: 169 VRQGALHETFNMAMNWKLPVIYIIENNNYAMGTSVERTTNVTDLSKIGDSYEMPSKSVNG 228 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPI 311 M AV +++AVA R GP ++++ TYRY+GHSMSDP YRT+EE+ E DPI Sbjct: 229 MSPEAVHEAIEEAVARARRGDGPSLLDIRTYRYKGHSMSDPQKYRTKEEVAEWMEQ-DPI 287 Query: 312 EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 E K + NKW + +++ I+ V+ + SV+FA+ PD +LY DI Sbjct: 288 EHCLKMIQSNKWLTAKEIEAIDAWVKNEVEESVKFAEESPYPDADDLYEDIY 339 >gi|239947786|ref|ZP_04699539.1| pyruvate dehydrogenase E1 component, alpha subunit [Rickettsia endosymbiont of Ixodes scapularis] gi|239922062|gb|EER22086.1| pyruvate dehydrogenase E1 component, alpha subunit [Rickettsia endosymbiont of Ixodes scapularis] Length = 329 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 171/315 (54%), Positives = 227/315 (72%), Gaps = 1/315 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ + + + MLL+RRFEEK GQLYGMG +GGFCHL IGQEAVI + M +GD IT Sbjct: 11 TKEEYMKSIKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDMVKQKGDSTIT 70 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +YR+H HI+ G + ++AEL GR G SKGKGGSMH+F N FYGGHGIVGAQV +G Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDVPNKFYGGHGIVGAQVPIG 130 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA KY ++ IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV+ Sbjct: 131 TGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEYSMGTSVA 190 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 ++ + K+G SF I G Q+DGMD + +A Y R + P+I+E+ TYRYRGH Sbjct: 191 HSTFMRDLYKKGESFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGH 250 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YR++EE+ + DP+ +RK +L NK+A+E DLKEIE +V++I+ +VEF+ Sbjct: 251 SMSDPAKYRSKEEVEQY-KERDPLVIIRKTILDNKYATEADLKEIEQSVKEIVKEAVEFS 309 Query: 348 QSDKEPDPAELYSDI 362 ++ PD ELY++I Sbjct: 310 ENSPLPDERELYTNI 324 >gi|108805206|ref|YP_645143.1| pyruvate dehydrogenase [Rubrobacter xylanophilus DSM 9941] gi|108766449|gb|ABG05331.1| Pyruvate dehydrogenase (lipoamide) [Rubrobacter xylanophilus DSM 9941] Length = 331 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 122/319 (38%), Positives = 172/319 (53%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +EQ L AYR M IR FEE+ + G + GF HL G+EA+ G+ L E D + Sbjct: 9 ELGREQLLDAYRTMRTIREFEERLHVEFATGEIPGFVHLYAGEEAIAAGVCAHLDEDDYI 68 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D +M E+ G+ GI GKGGSMH+ G G +GIVG Sbjct: 69 ASTHRGHGHAIAKGCDVKAMMKEIYGKAEGICHGKGGSMHIADLDKGMLGANGIVGGGPP 128 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G + K R + ++ V GDG +NQG ES N+AA+W L ++V+ENN YA TS Sbjct: 129 LVCGAGLSAKVRGTRQVAVSFTGDGGSNQGTFLESLNLAAVWGLPCVFVVENNGYAEATS 188 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + + +KR F IPG+ VDG D AV +AV R GP +IE RY Sbjct: 189 TNFSVRGLDIAKRADGFGIPGVVVDGHDFFAVHEAAGEAVERARNGGGPTLIECKVNRYY 248 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR E+ E+R D + R+R++ E +L I+ VR +I+ +VE Sbjct: 249 GHFEGDAQTYRAPNEVEEIRREKDCLMLFRRRVVSAGLVEEEELDRIDDEVRNLIDEAVE 308 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ +P P EL +D+ + Sbjct: 309 EAKAAPDPSPEELLTDVYV 327 >gi|229161648|ref|ZP_04289628.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus R309803] gi|228621893|gb|EEK78739.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus R309803] Length = 332 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 186/319 (58%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++A+ R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAIERARNGGGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVHFRKHLIHEALLTESELVDMEKAVDEAVQKSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ AEL D+ + Sbjct: 311 FSENSPYPEDAELLKDVYV 329 >gi|42781861|ref|NP_979108.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus ATCC 10987] gi|42737785|gb|AAS41716.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus ATCC 10987] Length = 332 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 128/318 (40%), Positives = 184/318 (57%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 12 ITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDRDSIT 71 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 72 STHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFPL 131 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 132 ACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATTF 191 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR G Sbjct: 192 EYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTIIECMTYRNYG 251 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H + Y+T EE E + D I RK L+H +E +L ++E V + + S+EF Sbjct: 252 HFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQKSIEF 311 Query: 347 AQSDKEPDPAELYSDILI 364 +++ P+ EL D+ + Sbjct: 312 SENSPYPEDEELLKDVYV 329 >gi|296235078|ref|XP_002762743.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 3 [Callithrix jacchus] Length = 428 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 178/353 (50%), Positives = 235/353 (66%), Gaps = 7/353 (1%) Query: 14 KMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQ 71 L S + AT + D+ LE G V+ +E L YR+M +RR E KA Q Sbjct: 59 SRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQ 118 Query: 72 LYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTG 131 LY ++ GFCHLC GQEA VG++ + D +ITAYR HG G+ +I+AELTG Sbjct: 119 LYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTG 178 Query: 132 RQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGA 191 R+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A KY D++C+ +GDGA Sbjct: 179 RKGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGA 236 Query: 192 ANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDG 251 ANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG IPG++VDG Sbjct: 237 ANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDG 294 Query: 252 MDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDP 310 MDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DP Sbjct: 295 MDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDP 354 Query: 311 IEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 I ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP EL I Sbjct: 355 IMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIY 407 >gi|196032304|ref|ZP_03099718.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus W] gi|218903896|ref|YP_002451730.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus AH820] gi|229122322|ref|ZP_04251536.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus 95/8201] gi|195995055|gb|EDX59009.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus W] gi|218536721|gb|ACK89119.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus AH820] gi|228661171|gb|EEL16797.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus 95/8201] Length = 332 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 184/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P EL D+ + Sbjct: 311 FSENSPYPGDEELLKDVYV 329 >gi|163940524|ref|YP_001645408.1| pyruvate dehydrogenase (acetyl-transferring) [Bacillus weihenstephanensis KBAB4] gi|163862721|gb|ABY43780.1| Pyruvate dehydrogenase (acetyl-transferring) [Bacillus weihenstephanensis KBAB4] Length = 332 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 128/319 (40%), Positives = 185/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP +IE +TYR Sbjct: 191 FEYASSCNSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGGGPTLIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 251 GHFEGEAQTYKTAEEKEEHLNEKDAIVHFRKHLIHEALLTESELVDMEKAVDEAVQKSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 311 FSENSPYPEDEELLKDVYV 329 >gi|228927825|ref|ZP_04090873.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228831888|gb|EEM77477.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 341 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 184/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 20 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 79 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 80 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 139 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 140 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 199 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 200 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNY 259 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 260 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKVVDEAVQRSIE 319 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P EL D+ + Sbjct: 320 FSENSPYPGDEELLKDVYV 338 >gi|262038070|ref|ZP_06011475.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Leptotrichia goodfellowii F0264] gi|261747890|gb|EEY35324.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Leptotrichia goodfellowii F0264] Length = 321 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 123/319 (38%), Positives = 190/319 (59%), Gaps = 2/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +K + L+ Y LML IR F+ K QL GMV G HL +G+EA +G +L D + Sbjct: 2 ELSKNRLLNMYELMLDIRNFDLKVNQLVKRGMVPGMTHLSVGEEAANIGALSALNPDDII 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG ++ G+D + +MAE+ G+ G KGKGGSMH+ +NG G +GIVG Sbjct: 62 TSNHRGHGQVIGKGIDLNGMMAEIMGKATGTCKGKGGSMHIADLENGNLGANGIVGGGQG 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A+ K +++ KI V FGDGA N+G +E+ N+A++W + VI+ NN Y + TS Sbjct: 122 IAVGAAYTQKVKKTGKIVVCFFGDGATNEGSFHETLNLASVWKVPVIFYSINNGYGISTS 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + + + +R ++ IPG + DG D+ V ++AV Y R GP++IE +TYR+ Sbjct: 182 IKKVMNTEHIYERAAAYGIPGYFIEDGNDVLEVYKKFEEAVKYVREGNGPVLIESVTYRW 241 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS SDP YRT+EE++E DPI + K L+ NK A++ +L +++ ++ I ++V Sbjct: 242 FGHSSSDPGKYRTKEEVDEW-KKKDPILKFGKYLVENKIATQEELDKLDEISKQKIEDAV 300 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFA++ EP + DI Sbjct: 301 EFAKNSPEPTIESAFEDIY 319 >gi|16758900|ref|NP_446446.1| pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial precursor [Rattus norvegicus] gi|548412|sp|Q06437|ODPAT_RAT RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; AltName: Full=PDHE1-A type II; Flags: Precursor gi|57655|emb|CAA79318.1| pyruvate dehydrogenase (lipoamide) [Rattus rattus] gi|2351254|gb|AAB68458.1| pyruvate dehydrogenase E1 alpha subunit [Rattus norvegicus] gi|51259267|gb|AAH78757.1| Pyruvate dehydrogenase (lipoamide) alpha 2 [Rattus norvegicus] gi|149026095|gb|EDL82338.1| rCG29007 [Rattus norvegicus] Length = 391 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 163/347 (46%), Positives = 231/347 (66%), Gaps = 7/347 (2%) Query: 20 SVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 S+ AT + D+ LE G S +E+ L YR M +IRR E KA QLY Sbjct: 28 SLKFSNDATCDIKKCDLYLLEQGPPTSTVLTREEALKYYRNMQVIRRMELKADQLYKQKF 87 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 + GFCHLC GQEA VG++ + D +IT+YR HG G+ I+AELTGR+GG + Sbjct: 88 IRGFCHLCDGQEACNVGLEAGINPTDHIITSYRAHGLCYTRGLSVKSILAELTGRKGGCA 147 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHM+ FYGG+GIVGAQV LG G+A A KY ++ +IC+ +GDGAANQGQV Sbjct: 148 KGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGVALACKYLKNGQICLALYGDGAANQGQV 205 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 +E++N++ALW L +++ ENN+Y MGT++ R++A T++ K F IPG++V+GMDI +V Sbjct: 206 FEAYNMSALWKLPCVFICENNRYGMGTAIERSAASTDYHK--KGFVIPGLRVNGMDILSV 263 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRK 316 + A +CR+ KGPI++E+ TYRY GHSMSDP +YRTREE+ +RS DPI +R+ Sbjct: 264 REATKFAADHCRSGKGPIVMELQTYRYHGHSMSDPGISYRTREEVQNVRSKSDPIMLLRE 323 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R++ N +S +LKEI+ +V+K + + +FA +D EP +L + + Sbjct: 324 RMISNNLSSVEELKEIDADVKKEVEEAAQFATTDPEPPLEDLANYLY 370 >gi|52142736|ref|YP_084094.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Bacillus cereus E33L] gi|51976205|gb|AAU17755.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Bacillus cereus E33L] Length = 332 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 128/318 (40%), Positives = 183/318 (57%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 12 ITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSIT 71 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 72 STHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFPL 131 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 132 ACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATTF 191 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR G Sbjct: 192 EYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNYG 251 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H + Y+T EE E + D I RK L+H +E +L ++E V + S+EF Sbjct: 252 HFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDDAVQKSIEF 311 Query: 347 AQSDKEPDPAELYSDILI 364 +++ P+ EL D+ + Sbjct: 312 SENSPYPEDEELLKDVYV 329 >gi|156362185|ref|XP_001625661.1| predicted protein [Nematostella vectensis] gi|156212504|gb|EDO33561.1| predicted protein [Nematostella vectensis] Length = 394 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 155/318 (48%), Positives = 215/318 (67%), Gaps = 5/318 (1%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L+ YR M ++RR E A LY ++ GFCHL GQEA VGM+ S+ + D +I Sbjct: 59 MTREEGLTYYRQMQIVRRMETAASNLYKSKVIRGFCHLYSGQEACCVGMEASIDKNDSVI 118 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG G A +++ ELTGR+ G ++GKGGSMHM+ + +YGG+GIVGAQV L Sbjct: 119 TAYRCHGWTYMRGRSAREVLCELTGRKTGCTQGKGGSMHMYGHE--YYGGNGIVGAQVPL 176 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIA A+K R + +IC+ +GDGAANQGQ++E++N+A LWNL I++ ENN Y MGTSV Sbjct: 177 GAGIALAHKLRGNGRICLTLYGDGAANQGQLFETYNMAKLWNLPCIFICENNGYGMGTSV 236 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RA+A T + RG IPG++VDGMD+ V+ AV Y R+ KGPI++E+ TYRY G Sbjct: 237 ERAAATTEYYSRGDY--IPGIRVDGMDVLTVREATKWAVDYARSGKGPILMELKTYRYYG 294 Query: 287 HSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP YR+R+EI +R DPI +R++LL + AS D+K+IE + I+ +VE Sbjct: 295 HSMSDPGTSYRSRDEIQSVRKTRDPITGLREKLLDSGLASTDDIKKIEQEAKAEIDEAVE 354 Query: 346 FAQSDKEPDPAELYSDIL 363 A++D EP +L+ + Sbjct: 355 CAKNDPEPPLDDLFMHVY 372 >gi|47569039|ref|ZP_00239729.1| acetoin dehydrogenase, alpha subunit [Bacillus cereus G9241] gi|301054296|ref|YP_003792507.1| acetoin dehydrogenase (TPP-dependent) E1 component subunit alpha [Bacillus anthracis CI] gi|47554308|gb|EAL12669.1| acetoin dehydrogenase, alpha subunit [Bacillus cereus G9241] gi|300376465|gb|ADK05369.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Bacillus cereus biovar anthracis str. CI] Length = 332 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 128/319 (40%), Positives = 184/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E ++ ++E V + + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESEIVDMEKAVDEAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P EL D+ + Sbjct: 311 FSENSPYPGDEELLKDVYV 329 >gi|148227748|ref|NP_001086638.1| pyruvate dehydrogenase (lipoamide) alpha 1 [Xenopus laevis] gi|50417951|gb|AAH77220.1| Pdha1-A-prov protein [Xenopus laevis] Length = 400 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 177/368 (48%), Positives = 238/368 (64%), Gaps = 12/368 (3%) Query: 4 AKQDVT-----VGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSE--FNKEQELSAY 56 A++ VT + +A AT V D+ LE ++ +EQ L Y Sbjct: 16 AQKPVTGAANEAVRVMVASRNYADFASEATFDVKKCDVHRLEEGPPTQAVLTREQGLQYY 75 Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M IRR E K+ QLY ++ GFCHL GQEA VG++ + D +ITAYR HG+ Sbjct: 76 RTMQTIRRMELKSDQLYKQKIIRGFCHLYDGQEACCVGLESGINPTDHLITAYRAHGYTY 135 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 GV +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG G+A A K+ Sbjct: 136 TRGVSVKEILAELTGRKGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGVALACKF 193 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 D+ICV +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ Sbjct: 194 FGKDEICVSLYGDGAANQGQIFETYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYY 253 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANY 295 KRG IPG++VDGMD+ V+ A +CR+ KGPI++E+ TYRY GHSMSDP +Y Sbjct: 254 KRGDY--IPGLRVDGMDVLCVREATKFAADHCRSGKGPILMELQTYRYHGHSMSDPGVSY 311 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREEI E+RS DPI ++ R+L+N +S +LKEI++ VRK I + +FA +D EP Sbjct: 312 RTREEIQEVRSKSDPITLLKDRMLNNNLSSVEELKEIDVEVRKEIEEAAQFATTDPEPPL 371 Query: 356 AELYSDIL 363 E+ + I Sbjct: 372 EEIANHIY 379 >gi|291401406|ref|XP_002717019.1| PREDICTED: pyruvate dehydrogenase E1 alpha 2-like [Oryctolagus cuniculus] Length = 391 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 167/355 (47%), Positives = 229/355 (64%), Gaps = 7/355 (1%) Query: 12 DIKMALNPSVSAKRAATSSVDCVDIPFLE--GFEVSEFNKEQELSAYRLMLLIRRFEEKA 69 + L S + A + D+ L+ + +E L Y++M ++RR E KA Sbjct: 20 PARRVLVASCNYSNDAMFEIKKCDLYLLDEGPPLTAVLTREDGLRYYKMMQVVRRMELKA 79 Query: 70 GQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAEL 129 QLY + GFCHLC GQEA VG++ + D +IT+YR HG G+ I+AEL Sbjct: 80 DQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGLPVRSILAEL 139 Query: 130 TGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGD 189 TGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG G+A A KY +++IC+ +GD Sbjct: 140 TGRRGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGVALACKYMGNNEICLTLYGD 197 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 GAANQGQ+ E++N+AALW L I++ ENN Y MGTSV RA+A T++ KR IPG++V Sbjct: 198 GAANQGQIAEAYNMAALWKLPCIFICENNLYGMGTSVERAAASTDYYKR--GHFIPGLRV 255 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNH 308 DGMDI V+ A YCR+ KGPI++E+ TYRY GHSMSDP +YR+REEI ++RS Sbjct: 256 DGMDILCVREATRFAANYCRSGKGPILMELQTYRYHGHSMSDPGISYRSREEIQKVRSKS 315 Query: 309 DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DPI ++ R++++K AS +LKEI+ VRK I ++ +FA +D EP EL + Sbjct: 316 DPIMLLQDRMVNSKLASVEELKEIDSEVRKEIEDAAQFATTDPEPPVEELGHHLY 370 >gi|119511804|ref|ZP_01630905.1| Dehydrogenase, E1 component [Nodularia spumigena CCY9414] gi|119463516|gb|EAW44452.1| Dehydrogenase, E1 component [Nodularia spumigena CCY9414] Length = 344 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 142/329 (43%), Positives = 213/329 (64%), Gaps = 9/329 (2%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + ++ KE+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ ++ G Sbjct: 13 KTTKITKEEGLRLYEDMVLGRSFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIQAMRPG 72 Query: 103 -DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D + + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS ++G GG+ V Sbjct: 73 EDFVSSTYRDHVHALSAGVPAREVMAELFGKATGCSKGRGGSMHMFSAEHGLLGGYAFVA 132 Query: 162 AQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 + + G AF +KYRR D++ FGDGAAN GQ +E+ N+A+LW L +I+V Sbjct: 133 EGIPVAAGAAFQSKYRREVLKDQNADQVTACFFGDGAANNGQFFETLNMASLWKLPIIFV 192 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 +ENN++A+G S RA++Q K+ FN+ G++VDGMD+ AV+A +AVA RA +GP Sbjct: 193 VENNKWAIGMSHERATSQPEIYKKASVFNMVGVEVDGMDVLAVRAVAQEAVARARAGEGP 252 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 +IE LTYR+RGHS++DP R++ E E + DPI+++ LL A + +LK I+ Sbjct: 253 TLIEALTYRFRGHSLADPDEMRSKAE-KEFWFSRDPIKKLAAYLLEQNLADDAELKAIDR 311 Query: 335 NVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++++I+ +V+FA+S EPDP+ELY + Sbjct: 312 KIQEVIDEAVKFAESSPEPDPSELYRFVF 340 >gi|291084742|ref|NP_001166925.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 2 precursor [Homo sapiens] gi|148357460|gb|ABQ59099.1| mitochondrial PDHA1 [Homo sapiens] gi|221039426|dbj|BAH11476.1| unnamed protein product [Homo sapiens] Length = 428 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 178/360 (49%), Positives = 236/360 (65%), Gaps = 7/360 (1%) Query: 7 DVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRR 64 + L S + AT + D+ LE G V+ +E L YR+M +RR Sbjct: 52 SLKTRQASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRR 111 Query: 65 FEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASK 124 E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG G+ + Sbjct: 112 MELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVRE 171 Query: 125 IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A KY D++C+ Sbjct: 172 ILAELTGRKGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCL 229 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG I Sbjct: 230 TLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--I 287 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINE 303 PG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E Sbjct: 288 PGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQE 347 Query: 304 MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP EL I Sbjct: 348 VRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIY 407 >gi|225453620|ref|XP_002267676.1| PREDICTED: similar to putative pyruvate dehydrogenase E1 alpha subunit [Vitis vinifera] gi|296089009|emb|CBI38712.3| unnamed protein product [Vitis vinifera] Length = 433 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 124/323 (38%), Positives = 190/323 (58%), Gaps = 7/323 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L + D ++ Sbjct: 84 ITREEGLELYEDMVLGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDCVV 143 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A +M+EL G+ G +G+GGSMHMFS ++ GG +G + + Sbjct: 144 STYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNVLGGFAFIGEGIPV 203 Query: 167 GTGIAFANKYRRS------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 TG AF +KY+R D++ + FGDG N GQ +E N+A+LW L +++V+ENN + Sbjct: 204 ATGAAFTSKYKREVLKEDCDEVTLAFFGDGTCNNGQFFECLNMASLWKLPIVFVVENNLW 263 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 A+G S RA++ K+G +F +PG VDGMD+ V+ +A+ R +GP ++E Sbjct: 264 AIGMSHLRATSDPEIWKKGPAFGMPGFHVDGMDVLKVREVAKEAIQRARRGEGPTLVECE 323 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 TYR+RGHS++DP R E + DP+ ++K + NK ASE +LK IE + +++ Sbjct: 324 TYRFRGHSLADPDELRDPAEKAHY-AARDPLTALKKYIFDNKLASEAELKAIEKKIDEVV 382 Query: 341 NNSVEFAQSDKEPDPAELYSDIL 363 SVEFA + P ++L ++ Sbjct: 383 EESVEFADASPPPPRSQLLENVF 405 >gi|149701576|ref|XP_001497720.1| PREDICTED: similar to Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor (PDHE1-A type I) [Equus caballus] Length = 391 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 172/355 (48%), Positives = 231/355 (65%), Gaps = 7/355 (1%) Query: 12 DIKMALNPSVSAKRAATSSVDCVDIPFLE--GFEVSEFNKEQELSAYRLMLLIRRFEEKA 69 L S + AT + D+ LE + +E L YR+M +RR E KA Sbjct: 20 PASRVLVASCNYSNDATFEIKKCDLHRLEEGPPVTAVLTREDGLQYYRMMQTVRRMELKA 79 Query: 70 GQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAEL 129 QLY + GFCHLC GQEA VG+K D ITAYR HG A G+ I+AEL Sbjct: 80 DQLYKQKFIRGFCHLCDGQEACYVGLKAGANPSDHAITAYRAHGLCYAYGLSVQSILAEL 139 Query: 130 TGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGD 189 TGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG G+A A KY+ S+++C+ +GD Sbjct: 140 TGRRGGCAKGKGGSMHMYGR--NFYGGNGIVGAQVPLGAGVALACKYKGSNEVCLTLYGD 197 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 GAANQGQ++E++N+AALW L I++ ENN+Y MGT++ RASA T++ KR IPG++V Sbjct: 198 GAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTAIERASASTDYYKRVNF--IPGLRV 255 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNH 308 DGMD+ V+ A YCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI +RS Sbjct: 256 DGMDVLCVREAAKFAADYCRSGKGPIVMELQTYRYHGHSMSDPGISYRTREEIQNIRSKS 315 Query: 309 DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DPI ++ ++L+NK +S +LKEI++ VRK I+++ +FA +D EP EL + Sbjct: 316 DPIMLLKDKMLNNKLSSIEELKEIDVGVRKEIDDAAQFATTDPEPPLEELGHHVY 370 >gi|332224044|ref|XP_003261177.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 3 [Nomascus leucogenys] gi|332224046|ref|XP_003261178.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 4 [Nomascus leucogenys] Length = 428 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 178/360 (49%), Positives = 236/360 (65%), Gaps = 7/360 (1%) Query: 7 DVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRR 64 + L S + AT + D+ LE G V+ +E L YR+M +RR Sbjct: 52 SLKTRQASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRR 111 Query: 65 FEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASK 124 E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG G+ + Sbjct: 112 MELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVRE 171 Query: 125 IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A KY D++C+ Sbjct: 172 ILAELTGRKGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCL 229 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG I Sbjct: 230 TLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--I 287 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINE 303 PG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E Sbjct: 288 PGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQE 347 Query: 304 MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP EL I Sbjct: 348 VRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIY 407 >gi|6715645|gb|AAF26472.1|AC007323_13 T25K16.8 [Arabidopsis thaliana] Length = 679 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 138/354 (38%), Positives = 205/354 (57%), Gaps = 8/354 (2%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEF-NKEQELSAYRLMLLIRRFEEKAGQLYGM 75 LN S + +R+ SV V S KE+ L Y M+L R FE+ Q+Y Sbjct: 48 LNHSNATRRSPVVSVQEVVKEKQSTNNTSLLITKEEGLELYEDMILGRSFEDMCAQMYYR 107 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 G + GF HL GQEAV G LT+ D +++ YR+H H L+ GV A +M+EL G+ G Sbjct: 108 GKMFGFVHLYNGQEAVSTGFIKLLTKSDSVVSTYRDHVHALSKGVSARAVMSELFGKVTG 167 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS------DKICVVCFGD 189 +G+GGSMHMFS ++ GG +G + + TG AF++KYRR D + V FGD Sbjct: 168 CCRGQGGSMHMFSKEHNMLGGFAFIGEGIPVATGAAFSSKYRREVLKQDCDDVTVAFFGD 227 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 G N GQ +E N+AAL+ L +I+V+ENN +A+G S RA++ K+G +F +PG+ V Sbjct: 228 GTCNNGQFFECLNMAALYKLPIIFVVENNLWAIGMSHLRATSDPEIWKKGPAFGMPGVHV 287 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHD 309 DGMD+ V+ +AV R +GP ++E TYR+RGHS++DP R E + + D Sbjct: 288 DGMDVLKVREVAKEAVTRARRGEGPTLVECETYRFRGHSLADPDELRDAAEKAKY-AARD 346 Query: 310 PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 PI ++K L+ NK A E +LK IE + +++ +VEFA + +P ++L ++ Sbjct: 347 PIAALKKYLIENKLAKEAELKSIEKKIDELVEEAVEFADASPQPGRSQLLENVF 400 >gi|28465343|dbj|BAC57468.1| pyruvate dehydrogenase E1alpha subunit [Beta vulgaris] Length = 395 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 158/320 (49%), Positives = 214/320 (66%), Gaps = 4/320 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + + ++ +R M L+RR E + LY ++ GFCHL GQEAV VGM+ ++T+ D + Sbjct: 59 DTTPAELMTYFRDMALMRRMEIASDSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDNI 118 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H LA G AEL GRQ G S+GKGGSMH + +GFYGGHGIVGAQV Sbjct: 119 ITAYRDHCIYLARGGSLLSAFAELMGRQDGCSRGKGGSMHFYKKDSGFYGGHGIVGAQVP 178 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA KY + D + +GDGAANQGQ++E+ N+AALW+L I V ENN Y MGT+ Sbjct: 179 LGVGLAFAQKYNKEDCVSFALYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTA 238 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RA+ ++ KRG +PG++VDGMD+ AVK A Y + GPII+EM TYRY Sbjct: 239 EWRAAKSPSYYKRGDY--VPGLKVDGMDVLAVKQACKFAKEYVLKN-GPIILEMDTYRYH 295 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP + YRTR+EI+ +R DPIE+VRK LL + A E +LK+IE +RK ++ ++ Sbjct: 296 GHSMSDPGSTYRTRDEISGIRQERDPIERVRKLLLAHDIAGEKELKDIEKEIRKEVDEAI 355 Query: 345 EFAQSDKEPDPAELYSDILI 364 A+ PD +EL+++I + Sbjct: 356 AKAKESPMPDTSELFTNIYV 375 >gi|49477854|ref|YP_036865.1| acetoin dehydrogenase (TPP-dependent) E1 component subunit alpha [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49329410|gb|AAT60056.1| acetoin dehydrogenase (TPP-dependent) E1 component alpha subunit [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 332 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 127/318 (39%), Positives = 183/318 (57%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 12 ITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSIT 71 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 72 STHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFPL 131 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 132 ACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATTF 191 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR G Sbjct: 192 EYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNYG 251 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H + Y+T EE E + D I RK L+H +E ++ ++E V + + S+EF Sbjct: 252 HFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESEIVDMEKAVDEAVQRSIEF 311 Query: 347 AQSDKEPDPAELYSDILI 364 +++ P EL D+ + Sbjct: 312 SENSPYPGDEELLKDVYV 329 >gi|297843008|ref|XP_002889385.1| PDH-E1 alpha [Arabidopsis lyrata subsp. lyrata] gi|297335227|gb|EFH65644.1| PDH-E1 alpha [Arabidopsis lyrata subsp. lyrata] Length = 432 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 138/366 (37%), Positives = 210/366 (57%), Gaps = 8/366 (2%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIR 63 + + +TV + LN S + +R+ +V V KE+ L Y M+L R Sbjct: 41 STRSLTVNSPRR-LNHSNATRRSPVVAVQEVVKEKQSTNNSLLITKEEGLELYEDMILGR 99 Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 FE+ Q+Y G + GF HL GQEAV G LT+ D +++ YR+H H L+ GV A Sbjct: 100 SFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLTKSDSVVSTYRDHVHALSKGVSAR 159 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS---- 179 +M+EL G+ G +G+GGSMHMFS ++ GG +G + + TG AF++KYRR Sbjct: 160 AVMSELFGKVTGCCRGQGGSMHMFSKEHNMLGGFAFIGEGIPVATGAAFSSKYRREVLKQ 219 Query: 180 --DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + + V FGDG N GQ YE N+AAL+ L +I+V+ENN +A+G S RA++ K Sbjct: 220 DCEDVTVAFFGDGTCNNGQFYECLNMAALYKLPIIFVVENNLWAIGMSHLRATSDPEIWK 279 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRT 297 +G +F +PG+ VDGMD+ V+ +AV R +GP ++E TYR+RGHS++DP R Sbjct: 280 KGPAFGMPGVHVDGMDVLKVREVAKEAVTRARRGEGPTLVECETYRFRGHSLADPDELRD 339 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 E + + DPI ++K L+ NK A E +LK IE + +++ +VEFA + +P ++ Sbjct: 340 AAEKAKY-AARDPIVALKKYLIENKLAKEAELKSIEKKIDELVEEAVEFADASPQPGRSQ 398 Query: 358 LYSDIL 363 L ++ Sbjct: 399 LLENVF 404 >gi|110640084|ref|YP_680294.1| pyruvate dehydrogenase E1 component subunit alpha [Cytophaga hutchinsonii ATCC 33406] gi|110282765|gb|ABG60951.1| pyruvate dehydrogenase E1 component alpha subunit [Cytophaga hutchinsonii ATCC 33406] Length = 347 Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats. Identities = 156/317 (49%), Positives = 205/317 (64%), Gaps = 1/317 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F KE L Y M L+R+FEEK GQLYG + GFCHL IGQEA G +L +GD I Sbjct: 22 FTKETYLFWYEKMQLVRKFEEKTGQLYGQQKIKGFCHLYIGQEACAAGAVSALKKGDHYI 81 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HG L G D IMAE+ G+ GISKGKGGSMH+F F GGHGIVG Q+ L Sbjct: 82 TTYRDHGQPLVLGTDPKAIMAEMYGKATGISKGKGGSMHIFDKAVNFAGGHGIVGGQIPL 141 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AFA Y+ +D +CV GDGA QG ++E+FN+A LWN+ VI+VIENN YAMGTSV Sbjct: 142 GAGLAFAEMYKGTDNLCVCYMGDGAVRQGALHETFNLAMLWNIPVIFVIENNGYAMGTSV 201 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S T + G S+++P VD M + V ++ +A R+ GP ++E TYRY+G Sbjct: 202 QRTSNVTELYQIGESYDMPSEAVDAMSVEEVHLSVARAAERARSGGGPTLLEFRTYRYKG 261 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRT+EE+ ++ DPIE+VR +L K A+E DL+ I+ ++ + +V+F Sbjct: 262 HSMSDPAKYRTKEELESYKAQ-DPIEKVRAVILEKKHATEADLEAIDAKIKATVEEAVKF 320 Query: 347 AQSDKEPDPAELYSDIL 363 A+ PD +E Y D+ Sbjct: 321 AEESPYPDASEAYKDVY 337 >gi|257125329|ref|YP_003163443.1| pyruvate dehydrogenase (acetyl-transferring) [Leptotrichia buccalis C-1013-b] gi|257049268|gb|ACV38452.1| Pyruvate dehydrogenase (acetyl-transferring) [Leptotrichia buccalis C-1013-b] Length = 321 Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 193/319 (60%), Gaps = 2/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +K + L+ Y ML IR F+ K QL GMV G HL +G+EA VG +L D + Sbjct: 2 ELSKGKLLNIYERMLSIRNFDLKVNQLVKRGMVPGMTHLSVGEEAANVGAIAALNADDLI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG ++A G+D + +MAE+ G+ G KGKGGSMH+ ++G G +GIVG Sbjct: 62 TSNHRGHGQVIAKGIDLNGMMAEIMGKATGTCKGKGGSMHIADLESGNLGANGIVGGGHG 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A+ K + + KI V FGDGA N+G +E+ N+A++WN+ VI+ NN Y + TS Sbjct: 122 MAVGAAYTQKVKNTGKIVVCFFGDGATNEGSFHEAMNLASVWNVPVIFYSINNGYGISTS 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +++ + + KR V++ +PG + DG D+ +V T +KAV + R KGP+ IE +TYR+ Sbjct: 182 INKVTNVEHLYKRAVAYGMPGYFIEDGNDVLSVYETFEKAVEHVREGKGPVFIESITYRW 241 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS SDP YRT+EE++ + DP + R LL N A+E +L E+E +K I ++V Sbjct: 242 FGHSSSDPGKYRTKEEVDGWKLK-DPNLKFRNYLLENNIATEEELVELEQKSKKQIEDAV 300 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFA++ EP + DI Sbjct: 301 EFAKNSPEPTLESAFEDIF 319 >gi|328866957|gb|EGG15340.1| pyruvate dehydrogenase E1 alpha subunit [Dictyostelium fasciculatum] Length = 439 Score = 355 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 157/320 (49%), Positives = 216/320 (67%), Gaps = 5/320 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + NK++ ++ + M +RR E A QLY ++ GFCHL GQEAV GM+ ++T+ D Sbjct: 49 TTTNKDELMTFFTDMTKMRRIETVADQLYKKKLIRGFCHLYNGQEAVCTGMEAAITKEDH 108 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR+H ++A G +I+AEL + G SKGKGGSMHMF+ FYGG+GIVGAQ Sbjct: 109 VITAYRDHTFMMARGATPKEILAELLMKSTGCSKGKGGSMHMFTR--NFYGGNGIVGAQC 166 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG GIAF KY + +C+ +GDGAANQGQ++E+FN+A LW+L I++ ENN++ MGT Sbjct: 167 PLGAGIAFTQKYNNTGNVCLTYYGDGAANQGQLFEAFNMAKLWDLPCIFICENNKFGMGT 226 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 RA+A +F R + IPG++VDGM++ AVK A +CRA KGP+++EM TYRY Sbjct: 227 PQKRAAAGDDFYTR--AHYIPGIKVDGMNVLAVKTAGKWAADWCRAGKGPLVMEMDTYRY 284 Query: 285 RGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHSMSDP YRTREE+N +R DPIE VRK +L NK A+E +L IE R ++ + Sbjct: 285 VGHSMSDPGTSYRTREEVNNVRQIRDPIEYVRKLILDNKCATEDELTAIEDAARVEMDEA 344 Query: 344 VEFAQSDKEPDPAELYSDIL 363 EFA + P+P ELY+++ Sbjct: 345 AEFAIASPFPEPGELYTNVY 364 >gi|196041679|ref|ZP_03108970.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus NVH0597-99] gi|196027448|gb|EDX66064.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus NVH0597-99] Length = 332 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 128/318 (40%), Positives = 183/318 (57%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 12 ITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSIT 71 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 72 STHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFPL 131 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 132 ACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATTF 191 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 AS+ + + R ++NIPG+QVDG D+ AV ++AV R GP IIE +TYR G Sbjct: 192 EYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAEEAVERARNGDGPTIIECMTYRNYG 251 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H + Y+T EE E + D I RK L+H +E +L ++E V + + S+EF Sbjct: 252 HFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKVVDEAVQRSIEF 311 Query: 347 AQSDKEPDPAELYSDILI 364 +++ P EL D+ + Sbjct: 312 SENSPYPGDEELLKDVYV 329 >gi|472326|gb|AAA21744.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Clostridium magnum] Length = 326 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 121/317 (38%), Positives = 184/317 (58%), Gaps = 1/317 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + + + Y+ ML IR+FEE A G + GF HL IG+EAV G+ +L + D + Sbjct: 3 ISNSKIIDMYKTMLKIRKFEEVAMNASAEGRIPGFIHLYIGEEAVATGVCANLNDKDYIT 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGHI+A G D +MAEL G+ G KG+GGSMH+ G G +GIVGA L Sbjct: 63 STHRGHGHIVAKGGDLKLMMAELFGKATGYCKGRGGSMHIADATKGILGANGIVGAGHDL 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G + +YR ++++C+ FGD + NQG +E+ N+A++W L +++V ENN Y + TS Sbjct: 123 ALGAGLSAQYRGTNEVCICFFGDASTNQGTFHEALNMASVWKLPIVFVCENNGYGISTSQ 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R A + + RGV +N+PG+ VDG D+ AV +A+ R KGP ++E TYR+RG Sbjct: 183 KRHMAIKDVADRGVGYNVPGVVVDGNDVFAVYEAAGEAIKRAREGKGPTLLECKTYRHRG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H DP Y+ +EE +M DPI + K +L+N+ SE +KE++ ++ I +V F Sbjct: 243 HFEGDPMTYKPKEE-QDMWLKKDPIPRFEKHILNNEVLSEEGIKEVQDDIENQIKEAVAF 301 Query: 347 AQSDKEPDPAELYSDIL 363 A + P+ D+ Sbjct: 302 ADNSPIPNVETALEDVY 318 >gi|302770913|ref|XP_002968875.1| hypothetical protein SELMODRAFT_227859 [Selaginella moellendorffii] gi|300163380|gb|EFJ29991.1| hypothetical protein SELMODRAFT_227859 [Selaginella moellendorffii] Length = 436 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 135/345 (39%), Positives = 199/345 (57%), Gaps = 10/345 (2%) Query: 26 AATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLC 85 AAT++ P + E+ +E+ L Y M+L R FE+ Q+Y + GF HL Sbjct: 67 AATAAPVKESPPKIADIEL--VTREEGLELYEDMILGRCFEDMCAQMYYRSKMFGFVHLY 124 Query: 86 IGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMH 145 GQEAV G +L + D + + YR+H H L+ GV A ++M+EL G+ G +G+GGSMH Sbjct: 125 NGQEAVSTGFVKALKKDDYICSTYRDHVHALSKGVPARQVMSELFGKATGCCRGQGGSMH 184 Query: 146 MFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVY 198 MFS ++ GG +G + + TG AF KY R D + + FGDG N GQ + Sbjct: 185 MFSKEHRLLGGFAFIGEGIPVATGAAFNTKYSREVLKDLSVDAVTLAFFGDGTCNNGQFF 244 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 E N+AALW L ++YV+ENN +A+G RA++ K+G +F +PG+ VDGMD+ V+ Sbjct: 245 ECLNMAALWKLPIVYVVENNLWAIGMDHFRATSVPEIWKKGEAFGMPGVHVDGMDVLKVR 304 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 +A+A R GP ++E TYRYRGHS++DP R E+ N+ + DPI +K L Sbjct: 305 EVAKEAIARARRGDGPTLVECETYRYRGHSLADPDELRKPEQKNKY-AVRDPIAAFKKYL 363 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 L N ASE DLK IE + +I+ ++VEFA + P ++L ++ Sbjct: 364 LENGLASEADLKAIEKKIDEIVEDAVEFADASPLPPRSQLLENVF 408 >gi|266686|sp|P29804|ODPA_PIG RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor gi|1851|emb|CAA37180.1| pyruvate dehydrogenase (lipoamide) [Sus scrofa domesticus] Length = 389 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 181/370 (48%), Positives = 238/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVG----DIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G L S + AT + D+ LE G V+ +E L Sbjct: 3 MLAAVSRVLSGVAQKPASRVLVASRTFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 62 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 63 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 122 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ +I+AELTGR+GG KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 123 TFTRGLSVREILAELTGRRGGCGKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 180 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++E++N+AALW L +++ ENN+Y MGTSV RA+A T+ Sbjct: 181 KYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCVFICENNRYGMGTSVERAAASTD 240 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP Sbjct: 241 YYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGV 298 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 299 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 358 Query: 354 DPAELYSDIL 363 EL I Sbjct: 359 PLEELGYHIY 368 >gi|284040344|ref|YP_003390274.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Spirosoma linguale DSM 74] gi|283819637|gb|ADB41475.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Spirosoma linguale DSM 74] Length = 352 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 154/321 (47%), Positives = 207/321 (64%), Gaps = 1/321 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E + KE+ + Y M L R+FEEKAGQLYG + GFCHL IGQEA G +LT+ Sbjct: 23 EKIQHPKERYMYWYESMQLQRKFEEKAGQLYGQQKIRGFCHLYIGQEACSSGSFTALTKD 82 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+ ITAYR+HG +A G D IMAEL +Q G SKGKGGSMH+F F GGHGIVGA Sbjct: 83 DKWITAYRDHGIPIALGSDPKAIMAELFAKQTGSSKGKGGSMHIFDKSVNFIGGHGIVGA 142 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ +G GIAF+ KY ++ +C+ GDGA QG ++E+FN+A LW L VI+V+ENN YAM Sbjct: 143 QIPMGAGIAFSEKYNKTGNLCITFMGDGAVRQGALHEAFNMAMLWKLPVIFVVENNGYAM 202 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R S T+ ++++P VD M + AV + +A RA +GP +E TY Sbjct: 203 GTSVERTSNVTDLYTLAEAYDMPSEPVDAMSVEAVHEAVSRAAERARAGEGPTFLEFRTY 262 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDP YR++EE+ + + DPIEQV+ +L +A+E DL I+ ++ I++ Sbjct: 263 RYRGHSMSDPQKYRSKEEVEKYKM-RDPIEQVKATILEKGFATEDDLNAIDQKIKGIVDE 321 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P P E + D+ Sbjct: 322 SVKFAEESPYPAPEEAFKDVY 342 >gi|157803481|ref|YP_001492030.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Rickettsia canadensis str. McKiel] gi|157784744|gb|ABV73245.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Rickettsia canadensis str. McKiel] Length = 329 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 166/315 (52%), Positives = 226/315 (71%), Gaps = 1/315 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 KE+ + +++ M+L+RRFEEK QLYGMG +GGFCHL IGQEAVI + + +GD IT+ Sbjct: 12 KEEYIKSFKNMILLRRFEEKCSQLYGMGEIGGFCHLYIGQEAVISAVDIVKKKGDSTITS 71 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+H H++ G + ++AEL GR G SKGKGGSMH+F N FYGGHGIVGAQV +GT Sbjct: 72 YRDHAHVILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDVPNKFYGGHGIVGAQVPIGT 131 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+AFA KY ++ IC GDGA NQGQVYE+FN+AALW L V+Y+IENN+Y+MGTSV R Sbjct: 132 GLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMAALWGLAVVYIIENNEYSMGTSVVR 191 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++ + K+G SF I G Q+DGM+ + +A Y R P+I+E+ TYRYRGHS Sbjct: 192 STFMRDLYKKGESFGIKGFQLDGMNFEEMYDGTKQAAEYVRETSQPLILEVKTYRYRGHS 251 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YR++EE+ + DP+ +RK +L +K+A+E DLKEIE +V++I+ +VEF++ Sbjct: 252 MSDPAKYRSKEEVEQY-KKRDPLVIIRKTILDDKYATEADLKEIEQSVKEILKEAVEFSE 310 Query: 349 SDKEPDPAELYSDIL 363 + PD ELY++I Sbjct: 311 NSPLPDEGELYTNIF 325 >gi|189219018|ref|YP_001939659.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Methylacidiphilum infernorum V4] gi|189185876|gb|ACD83061.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Methylacidiphilum infernorum V4] Length = 358 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 146/311 (46%), Positives = 197/311 (63%), Gaps = 1/311 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E + E L Y+ M+LIRRFEEK+ Q + + GFCHL IGQEA+ VG+ SL D + Sbjct: 24 ELSSETRLELYKKMVLIRRFEEKSAQSFMQAKIKGFCHLYIGQEALAVGICSSLKPEDVV 83 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+HG LA G+ K MAEL G+ G SKG GGSMH+F + F+GGH IV AQ Sbjct: 84 ITAYRDHGIALARGLSPKKCMAELYGKATGTSKGLGGSMHLFDKEKRFFGGHAIVAAQCP 143 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L GIAFA KYR+ + + GDGA NQG +ES N+ +LW L V+YVIENN+YAMGT Sbjct: 144 LAAGIAFAQKYRKEKNVTLCLLGDGAVNQGVFHESLNLVSLWKLPVVYVIENNEYAMGTE 203 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + R++A K+ ++++ GM DGMD+ V++ + +AV R P++IE TYR+R Sbjct: 204 IHRSTAGLPLVKKSAAYDMAGMVTDGMDLEEVRSKVLEAVNLARNENCPVLIEARTYRFR 263 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDP YRT+EEI E DP+ ++L + + I+ V+KII +V+ Sbjct: 264 GHSMSDPDTYRTKEEIAEA-KRRDPLLLYSQKLQQLGILNPDLIARIDKEVKKIIQEAVQ 322 Query: 346 FAQSDKEPDPA 356 FA+S EPD + Sbjct: 323 FAESSPEPDLS 333 >gi|62897039|dbj|BAD96460.1| pyruvate dehydrogenase (lipoamide) alpha 1 variant [Homo sapiens] Length = 390 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 182/370 (49%), Positives = 239/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVG----DIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G L S + AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLSGASQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 124 TFTRGLSVREILAELTGRKGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 181 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 182 KYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 241 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP Sbjct: 242 YYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILLELQTYRYHGHSMSDPGV 299 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 Query: 354 DPAELYSDIL 363 EL I Sbjct: 360 PLEELGYHIY 369 >gi|196005995|ref|XP_002112864.1| expressed hypothetical protein [Trichoplax adhaerens] gi|190584905|gb|EDV24974.1| expressed hypothetical protein [Trichoplax adhaerens] Length = 389 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 156/348 (44%), Positives = 222/348 (63%), Gaps = 7/348 (2%) Query: 20 SVSAKRAATSSVDCVDIPFLEG--FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 S + + A + + LE + + + L Y+ M IRR E A LY Sbjct: 24 STATEGQAEFQLLPYQVHALENELPTAATITRSEALQYYKQMQTIRRLEVTADNLYKSKQ 83 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 + GFCHL GQEA VG++ ++T D +ITAYR HG GV ++AEL G + G + Sbjct: 84 IRGFCHLYNGQEACAVGIEAAITPEDSIITAYRAHGWTYLRGVSVEGVLAELIGHENGCA 143 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 +GKGGSMHM+ FYGG+GIVGAQV LG GIAFA+KY + +K+C+ +GDGAANQGQV Sbjct: 144 RGKGGSMHMYGK--NFYGGNGIVGAQVPLGAGIAFAHKYNKDNKVCITLYGDGAANQGQV 201 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 +E+FN+A LW+L I+V ENN+Y MGTSV RASA T + RG IPG++ +G D+ V Sbjct: 202 FETFNMAKLWSLPCIFVCENNKYGMGTSVERASASTEYYTRGDY--IPGIRANGHDVITV 259 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRK 316 + A +CR KGPIIIE+ TYRY+GHS+SDP +YRTR+EI+ +R DPI ++K Sbjct: 260 REVTKFAADWCRNGKGPIIIELETYRYKGHSVSDPGISYRTRDEIDHVRKTSDPIAMLKK 319 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 +LL + A+E ++K I+ ++ ++ ++ AQ+ KE +LY+D+ + Sbjct: 320 KLLDSSLATEDEIKGIDNEIKNYVSGELKKAQNGKELPLEDLYNDVYV 367 >gi|224042713|ref|XP_002196835.1| PREDICTED: pyruvate dehydrogenase (lipoamide) alpha 1 [Taeniopygia guttata] Length = 396 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 175/358 (48%), Positives = 234/358 (65%), Gaps = 7/358 (1%) Query: 9 TVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFE--VSEFNKEQELSAYRLMLLIRRFE 66 T + +A AT + D+ LE + +E+ L Y+ M IRR E Sbjct: 22 TASRVVVASRNYGDFASEATFEIKQCDLHRLEEGPGTTAVMTREEGLHYYKSMQTIRRME 81 Query: 67 EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIM 126 K+ QLY ++ GFCHL GQEA VG++ ++ D +ITAYR HG GV +I+ Sbjct: 82 LKSDQLYKQKIIRGFCHLYDGQEACCVGIEAAIKPTDHVITAYRAHGFTFTRGVPVREIL 141 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 AELTGR+GG +KGKGGSMHM++ FYGG+GIVGAQV LG GIA A KY ++ICV Sbjct: 142 AELTGRKGGCAKGKGGSMHMYTK--NFYGGNGIVGAQVPLGAGIALACKYYDKNEICVAL 199 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPG 246 +GDGAANQGQ++E++N+AALW L I+V ENN+Y MGTSV RA+A T++ KR + IPG Sbjct: 200 YGDGAANQGQIFETYNMAALWKLPCIFVCENNRYGMGTSVERAAASTDYYKR--GYFIPG 257 Query: 247 MQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMR 305 ++VDGMDI V+ + A YCR+ KGP+++E+ TYRY GHSMSDP +YRTREEI E+R Sbjct: 258 LRVDGMDILCVREAVKFAAEYCRSGKGPLVMELQTYRYHGHSMSDPGISYRTREEIQEVR 317 Query: 306 SNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 S DPI ++ R+++N AS +LKEI++ VRK I + +FA +D EP EL I Sbjct: 318 SKSDPITLLKDRMVNNNLASVEELKEIDVAVRKEIEEAAQFATTDPEPPLEELGHHIF 375 >gi|15898353|ref|NP_342958.1| pyruvate dehydrogenase alpha subunit (lipoamide) [Sulfolobus solfataricus P2] gi|13814758|gb|AAK41748.1| Pyruvate dehydrogenase, alpha subunit (lipoamide). (pdhA-2) [Sulfolobus solfataricus P2] gi|261602925|gb|ACX92528.1| dehydrogenase E1 component [Sulfolobus solfataricus 98/2] Length = 332 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 125/325 (38%), Positives = 185/325 (56%), Gaps = 8/325 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + K + L Y+ MLLIR E A +L+ G + GF HL +G+EAV VG+ +L + D + Sbjct: 4 DIPKSKLLDMYKKMLLIRYHELTAKELFASGKIPGFVHLYVGEEAVAVGVMSTLRDDDYI 63 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G+D +++AE+ G++ G+ KGKGGSMH+F G G +GIVG Sbjct: 64 TSTHRGHGHCIAKGLDVKRMLAEIMGKKTGVCKGKGGSMHIFDYSKGMLGANGIVGGGAP 123 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 G A A K + D++ V GDGA NQG V ES N++A+W L VI+V+E+N YAM T Sbjct: 124 HAVGAALAFKLKGLDRVAVAFIGDGAMNQGVVLESLNLSAIWKLPVIFVVEDNMYAMSTR 183 Query: 226 -------VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 R SA ++ +R + F IP ++VDGMD+ AV +AV R GP ++ Sbjct: 184 SLVPGKLQPRHSAAKSYVERALGFGIPAVEVDGMDVLAVYEVAKEAVDRARRGGGPSLLH 243 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYR+ GH DP YR +EE EM DPI R +L+ N + +L +I+ + Sbjct: 244 CKTYRFFGHFEGDPLVYRDKEE-EEMWRKRDPITLFRDKLVSNNIINSEELDKIDREAKA 302 Query: 339 IINNSVEFAQSDKEPDPAELYSDIL 363 I +++FA+ P+ E +D+ Sbjct: 303 EIEQALKFAEESPYPEVEEALTDVF 327 >gi|260890279|ref|ZP_05901542.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Leptotrichia hofstadii F0254] gi|260859899|gb|EEX74399.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Leptotrichia hofstadii F0254] Length = 325 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 128/319 (40%), Positives = 192/319 (60%), Gaps = 2/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +K + L+ Y ML IR F+ K QL GMV G HL +G+EA VG +L D + Sbjct: 6 ELSKGKLLNIYERMLSIRDFDLKVNQLVKRGMVPGMTHLSVGEEAANVGAIAALNADDLI 65 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG ++A G+D + +MAE+ G+ G KGKGGSMH+ ++G G +GIVG Sbjct: 66 TSNHRGHGQVIAKGIDLNGMMAEIMGKATGTCKGKGGSMHIADLESGNLGANGIVGGGHG 125 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G A+ K + + KI V FGDGA N+G +E+ N+A++WN+ VI+ NN Y + TS Sbjct: 126 MAVGAAYTQKVKNTGKIVVCFFGDGATNEGSFHEAMNLASVWNVPVIFYSINNGYGISTS 185 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +++ + + KR ++ +PG + DG D+ +V T +KAV + R KGP+ IE +TYR+ Sbjct: 186 INKVTKVEHLYKRAAAYGMPGYFIEDGNDVLSVYETFEKAVEHVREGKGPVFIESITYRW 245 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS SDP YRT+EE++ + DP + R LL N A+E +L E+E +K I ++V Sbjct: 246 FGHSSSDPGKYRTKEEVDGWKLK-DPNLKFRNYLLENNIATEEELVELEQKSKKQIEDAV 304 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFA++ EP + DI Sbjct: 305 EFAKNSPEPTLESAFEDIF 323 >gi|4505685|ref|NP_000275.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 1 precursor [Homo sapiens] gi|332224040|ref|XP_003261175.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 1 [Nomascus leucogenys] gi|129063|sp|P08559|ODPA_HUMAN RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor gi|35379|emb|CAA36933.1| unnamed protein product [Homo sapiens] gi|35381|emb|CAA36934.1| unnamed protein product [Homo sapiens] gi|189738|gb|AAA60050.1| pyruvate dehydrogenase alpha subunit [Homo sapiens] gi|190762|gb|AAA36533.1| pyruvate dehydrogenase alpha subunit precursor (EC 1.2.4.1) [Homo sapiens] gi|219982|dbj|BAA14121.1| pyruvate dehydrogenase alpha subunit [Homo sapiens] gi|292413|gb|AAA60227.1| pyruvate dehydrogenase E1-alpha subunit [Homo sapiens] gi|387009|gb|AAA60051.1| pyruvate dehydrogenase E1-alpha subunit [Homo sapiens] gi|12803199|gb|AAH02406.1| Pyruvate dehydrogenase (lipoamide) alpha 1 [Homo sapiens] gi|57209621|emb|CAI41291.1| pyruvate dehydrogenase (lipoamide) alpha 1 [Homo sapiens] gi|119619366|gb|EAW98960.1| pyruvate dehydrogenase (lipoamide) alpha 1, isoform CRA_a [Homo sapiens] gi|119619367|gb|EAW98961.1| pyruvate dehydrogenase (lipoamide) alpha 1, isoform CRA_a [Homo sapiens] gi|123981924|gb|ABM82791.1| pyruvate dehydrogenase (lipoamide) alpha 1 [synthetic construct] gi|123996757|gb|ABM85980.1| pyruvate dehydrogenase (lipoamide) alpha 1 [synthetic construct] gi|123996763|gb|ABM85983.1| pyruvate dehydrogenase (lipoamide) alpha 1 [synthetic construct] Length = 390 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 182/370 (49%), Positives = 239/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVG----DIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G L S + AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLSGASQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 124 TFTRGLSVREILAELTGRKGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 181 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 182 KYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 241 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP Sbjct: 242 YYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGV 299 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 Query: 354 DPAELYSDIL 363 EL I Sbjct: 360 PLEELGYHIY 369 >gi|221633471|ref|YP_002522696.1| TPP-dependent acetoin dehydrogenase subunit alpha [Thermomicrobium roseum DSM 5159] gi|221156155|gb|ACM05282.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Thermomicrobium roseum DSM 5159] Length = 330 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 123/319 (38%), Positives = 185/319 (57%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +++ L Y M LIR FE++ QL+ G + GF HL G+EA+ VG+ LT+ D + Sbjct: 2 EIPRDKLLWIYERMALIRAFEDRVAQLFAAGRIPGFVHLYAGEEAIAVGVCAHLTDRDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GVD + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHCIAKGVDVAAMMAELFGKATGVCKGKGGSMHIADVDKGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + G K +D++ V FGDGAA QG +E+ N+AA+W L V++V ENN YA T Sbjct: 122 IACGAGLMAKTLGTDQVAVCFFGDGAAEQGTTHEAMNLAAIWKLPVVFVCENNLYAESTP 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + A + + R ++++PG+ VDG D+ AV +A+A R +GP ++E +RY Sbjct: 182 WTYHCAAPDIASRASAYDMPGVLVDGTDVFAVYEAAGEAIARARRGEGPTLLECRAFRYY 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YRT EE R+ DPI++ R+ +L SE +L +I+ V++ + +V Sbjct: 242 GHFQGDAVTYRTPEEEASYRA-RDPIQRFRQTVLSQGLLSEDELDKIDRAVKQQVEEAVR 300 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+S P P E +D+ + Sbjct: 301 FAESSPLPPPEECLTDVYV 319 >gi|193290722|gb|ACF17669.1| putative pyruvate dehydrogenase E1 alpha subunit [Capsicum annuum] Length = 431 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 127/324 (39%), Positives = 190/324 (58%), Gaps = 8/324 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KE+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L + D ++ Sbjct: 81 ITKEEGLELYEDMVLGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVV 140 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++M+EL G+ G +G+GGSMHMFS ++ GG +G + + Sbjct: 141 STYRDHVHALSKGVPARQVMSELFGKTTGCCRGQGGSMHMFSKEHNVLGGFAFIGEGIPV 200 Query: 167 GTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG AF +KYRR D + + FGDG N GQ YE N+AALW L +I+V+ENN Sbjct: 201 ATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFYECLNMAALWKLPIIFVVENNL 260 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G S R+++ K+G +F +PG+ VDGMD+ V+ ++AV R +GP ++E Sbjct: 261 WAIGMSHLRSTSDPEIWKKGPAFGMPGVHVDGMDVLKVREVANEAVGRARRGEGPTLVEC 320 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR+RGHS++DP R E N + DPI ++K + N +E +LK I+ + ++ Sbjct: 321 ETYRFRGHSLADPDELRDPAEKNHY-ATRDPITALKKYMFENNLVNEAELKAIDKKIDEL 379 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 + SVEFA + P +L ++ Sbjct: 380 VEESVEFADASPVPARNQLLENVF 403 >gi|163849200|ref|YP_001637244.1| pyruvate dehydrogenase [Chloroflexus aurantiacus J-10-fl] gi|222527177|ref|YP_002571648.1| pyruvate dehydrogenase [Chloroflexus sp. Y-400-fl] gi|163670489|gb|ABY36855.1| Pyruvate dehydrogenase (acetyl-transferring) [Chloroflexus aurantiacus J-10-fl] gi|222451056|gb|ACM55322.1| Pyruvate dehydrogenase (acetyl-transferring) [Chloroflexus sp. Y-400-fl] Length = 338 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 123/319 (38%), Positives = 177/319 (55%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + ++E+ L AY M LIR FE++ + G + GF HL G+EAV VG+ L + D + Sbjct: 2 DISREKLLWAYERMRLIREFEDRLHTDFAAGKIPGFVHLYAGEEAVAVGLCAHLRDDDFI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GVD +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 62 TSTHRGHGHCIAKGVDLRAMMAEIYGKATGACKGKGGSMHIADVDKGMLGANGIVGGGPP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G K + +D++ V FGDGA+NQG +E N+A +W L V++V ENN YA TS Sbjct: 122 LACGAGLTAKIKGTDQVTVCFFGDGASNQGTTFEGLNLAGIWKLPVVFVCENNGYAETTS 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + + + R F +P + +DG+D AV +AVA R +GP IE TYRY Sbjct: 182 PRYSVSGQDIAARARGFGMPSIAIDGLDFFAVYEAAGEAVARARRGEGPTFIEAQTYRYY 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YRTR+E RS D + + R+ + + +L EI+ R + ++V Sbjct: 242 GHFEGDSIRYRTRDEEAHYRS-LDCLHRFRQTVTAQGLLTAAELDEIDARARAAVEDAVR 300 Query: 346 FAQSDKEPDPAELYSDILI 364 FA PDPAEL +D+ + Sbjct: 301 FAAESPLPDPAELLTDVYV 319 >gi|316969817|gb|EFV53857.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Trichinella spiralis] Length = 411 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 156/346 (45%), Positives = 209/346 (60%), Gaps = 5/346 (1%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFN--KEQELSAYRLMLLIRRFEEKAGQLYGMGMV 78 S A + L+ + +++ + R MLL+RR E A +Y + Sbjct: 38 FSTAAEAAFDITPFKTHKLDSAPAQQVTVTRDEAMKYLREMLLVRRMETTASNMYKEKQI 97 Query: 79 GGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK 138 GFCHL GQEAV VGMK ++ E D +ITAYR HG G+ ++ AEL GR G Sbjct: 98 RGFCHLYSGQEAVAVGMKAAMNEDDSIITAYRCHGWSFLSGITLKQVFAELAGRVTGAVH 157 Query: 139 GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 GKGGSMHM++ K+ FYGG IVGAQ+ LGTGI+FA KYR K+ +GDGA+NQGQ+Y Sbjct: 158 GKGGSMHMYNVKSHFYGGCAIVGAQIPLGTGISFAYKYRDEKKVSFCLYGDGASNQGQLY 217 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 ES N+A LW L ++V ENN Y MGTSV R+SA T + RG +PG+ V+ MD+ AV+ Sbjct: 218 ESLNMAKLWRLPCVFVCENNGYGMGTSVERSSASTEYYTRGDY--VPGLWVNAMDVLAVR 275 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKR 317 YCR GP+++EM TYRY GHSMSDP YRTREEI ++R DPI R++ Sbjct: 276 QATKWVAEYCREGNGPVVLEMATYRYFGHSMSDPGTSYRTREEIQKVRKLRDPITSFREK 335 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +L A+E +LK++E VRK + ++E A D +P LY+D+ Sbjct: 336 MLSANLATEEELKDLEKQVRKEVEKALEEALKDVDPPLELLYTDVY 381 >gi|115901559|ref|XP_001175746.1| PREDICTED: similar to Probable pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor (PDHE1-A) [Strongylocentrotus purpuratus] gi|115963800|ref|XP_001186546.1| PREDICTED: similar to Probable pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor (PDHE1-A) [Strongylocentrotus purpuratus] Length = 386 Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats. Identities = 164/367 (44%), Positives = 227/367 (61%), Gaps = 10/367 (2%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFE-----VSEFNKEQELSAYR 57 +AK+ T + +V++++ T + L E S K++ L Y Sbjct: 5 LAKRLGTASRQNLPRTVAVASRQVNTDVQLTTNPFKLHKLEEGPKKTSMLTKDEALDYYH 64 Query: 58 LMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 M IRR E A LY V GFCHL GQEA VG+ LT D +ITAYR HG Sbjct: 65 KMQTIRRMETAAATLYKSKEVRGFCHLYSGQEACAVGISSVLTPDDAVITAYRAHGWAYL 124 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 GV ++AELTGR+ G +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A KY Sbjct: 125 RGVTLHGVLAELTGRRTGCAKGKGGSMHMYCK--NFYGGNGIVGAQVPLGAGIALALKYT 182 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 +C+ +GDGAANQGQV+E++NIA LW+L I+V ENN+Y MGT+V R++A T++ Sbjct: 183 DKKNVCISLYGDGAANQGQVFEAYNIAKLWDLPCIFVCENNKYGMGTAVERSAASTDYYT 242 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YR 296 RG IPG+ VDGMD+ AV+ A YC + KGP+++E+ TYRY GHSMSDP YR Sbjct: 243 RGDY--IPGIWVDGMDVVAVREATRYAKDYCTSGKGPLVMEVETYRYHGHSMSDPGTSYR 300 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 +REE+ E+R + DPI +++ +L N+ ASE +LK I+ +VR ++ ++ A++D E + Sbjct: 301 SREEVQEIRQSQDPITKLKDTILSNELASEAELKAIDASVRSAVDEAMTKAKADPELPVS 360 Query: 357 ELYSDIL 363 E +++I Sbjct: 361 ETFTNIY 367 >gi|194014756|ref|ZP_03053373.1| pyruvate dehydrogenase E1 component subunit alpha [Bacillus pumilus ATCC 7061] gi|194013782|gb|EDW23347.1| pyruvate dehydrogenase E1 component subunit alpha [Bacillus pumilus ATCC 7061] Length = 327 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 125/318 (39%), Positives = 190/318 (59%), Gaps = 1/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + + E+ Y+ M L+R F+EK Q + G++ G HLC+GQEA VG L + D++ Sbjct: 10 QISHERLADLYKQMWLVRYFDEKVDQFFAKGLIHGTTHLCVGQEASAVGSIAVLKDEDKI 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ++ +R HGH +A G + +K+MAEL GR+ G KGKGGSMH+ + G G +GIVG + Sbjct: 70 VSTHRGHGHCIAKGAEVNKMMAELFGRETGYCKGKGGSMHIADLEKGNLGANGIVGGGIP 129 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L TG A +K ++ + + FGDGA N+G +E+ N+A++W+L V+++ ENNQY M Sbjct: 130 LATGAALTSKMKQEGYVVLCFFGDGATNEGSFHEALNLASIWDLPVVFICENNQYGMSGP 189 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V + S R S+ IPG +DG D+ + ++D+AV+ RA +GP +IEM TYR++ Sbjct: 190 VKEMINIEDISTRAESYGIPGKSIDGNDMVEIMNSVDEAVSRARAGEGPSLIEMKTYRWK 249 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS SD YRTREE E R D I++ + L+ +E ++ ++ I SVE Sbjct: 250 GHSKSDAKKYRTREEETEWRQK-DGIKRFKSLLIELNVLTEEQAAALQEEAKQEIEASVE 308 Query: 346 FAQSDKEPDPAELYSDIL 363 FA++ KEP L D+ Sbjct: 309 FAKNSKEPSIDTLLEDVY 326 >gi|332798638|ref|YP_004460137.1| Pyruvate dehydrogenase [Tepidanaerobacter sp. Re1] gi|332696373|gb|AEE90830.1| Pyruvate dehydrogenase (acetyl-transferring) [Tepidanaerobacter sp. Re1] Length = 319 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 127/318 (39%), Positives = 190/318 (59%), Gaps = 1/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +K+++L YR M IR FE + +L+ ++ G CHL +G+EA VG +L + D + Sbjct: 2 TLSKDKKLWMYRKMCEIRNFELEVDRLFKANLIWGTCHLSVGEEASAVGAVAALEKDDMI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G ++ AEL G++ G +G+GGSMH+ + G G +GIVG + Sbjct: 62 TSTHRGHGHCIAKGGKLPQMFAELLGKETGYCRGRGGSMHIADLEMGNLGANGIVGGGIP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + TG A A+K + + K+ + FGDGA NQG +E+ N+ A+ L ++Y+ ENN Y M Sbjct: 122 IATGAALASKLKNNGKVTLCFFGDGATNQGVFHEAVNLGAVKKLPIVYLCENNLYGMSVP 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +ASA N + R ++NIPG VDG D+ AV + +AV R +GP IIE TYR+ Sbjct: 182 FEKASAAKNVADRAAAYNIPGAAVDGNDVEAVYEIVKEAVEKAREGEGPSIIEAKTYRWL 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS SDP YRTREE E PI++ R++L+ A+E +L EIE +V KII ++E Sbjct: 242 GHSKSDPRVYRTREE-EEAWKQKCPIKRYRQKLISEGTATEEELDEIEKSVEKIIQEALE 300 Query: 346 FAQSDKEPDPAELYSDIL 363 +AQ+ EP E+ + Sbjct: 301 YAQNSPEPKVEEIMDGVY 318 >gi|281211968|gb|EFA86129.1| pyruvate dehydrogenase E1 alpha subunit [Polysphondylium pallidum PN500] Length = 784 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 155/317 (48%), Positives = 214/317 (67%), Gaps = 5/317 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 KE+ ++ + M +RR E A LY ++ GFCHL GQEAV GM+ ++T+ D +IT Sbjct: 455 TKEELITHFTDMTRMRRIEMVADSLYKKKLIRGFCHLYNGQEAVCTGMEAAITKNDHVIT 514 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR+H +LA G ++AEL + G SKGKGGSMHMF+ + FYGG+GIVGAQ +G Sbjct: 515 AYRDHTFMLARGATPESVLAELLMKSTGCSKGKGGSMHMFT--HNFYGGNGIVGAQCPVG 572 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIAF KY + IC+ +GDGAANQGQ++E+FN+A LW+L +++ ENN++ MGTS + Sbjct: 573 AGIAFTQKYNNTGNICLTYYGDGAANQGQLFEAFNMAKLWDLPCVFICENNKFGMGTSQA 632 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RA+A ++F R + I GM+VDGM++ AVK +CR+ KGP ++EM TYRY GH Sbjct: 633 RAAAGSDFYSR--AHFIAGMKVDGMNVLAVKQAGKFVADWCRSGKGPFVLEMDTYRYVGH 690 Query: 288 SMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP YRTR+E+NE+RS DPIE VR LL +K A+E DL IE R+ ++ + EF Sbjct: 691 SMSDPGTSYRTRDEVNEVRSIRDPIEYVRGLLLEHKLATEDDLTAIEEAAREEMDKAAEF 750 Query: 347 AQSDKEPDPAELYSDIL 363 A + PD ELY+++ Sbjct: 751 AINSPMPDMRELYTNVY 767 >gi|256424432|ref|YP_003125085.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Chitinophaga pinensis DSM 2588] gi|256039340|gb|ACU62884.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Chitinophaga pinensis DSM 2588] Length = 336 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 156/320 (48%), Positives = 212/320 (66%), Gaps = 1/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++F KE L Y LMLL+RRFEEKAGQLYGM + GFCHL IGQEA+ G + D+ Sbjct: 9 TKFTKETYLYWYELMLLLRRFEEKAGQLYGMQKIRGFCHLYIGQEAIAAGAMTATKPDDK 68 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 ITAYR+H +A G+ + MAEL G+ G SKGKGGSMH F+ GF+GGHGIVGAQ+ Sbjct: 69 FITAYRDHALAIAKGMTPDECMAELYGKATGCSKGKGGSMHFFAPDKGFFGGHGIVGAQI 128 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 G G+AFA +Y+ +D + + FGDGAA QG ++E+FN+A LW L VI++ ENN YAMGT Sbjct: 129 GTGAGLAFAEQYKGTDNVALCFFGDGAARQGMLHETFNMAMLWKLPVIFICENNMYAMGT 188 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R S + K ++++P +DGM V +D+AV RA +GP ++E+ TYRY Sbjct: 189 SVERTSNVLDIYKLANAYDMPSATIDGMSCETVHEGIDRAVKRARAGEGPTLLEIKTYRY 248 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHSMSDPA YRT+EE+ E + DPI QV + NKWA++ +++ I V++ + + V Sbjct: 249 RGHSMSDPAKYRTKEEVEEY-KDKDPINQVLATIQKNKWATDAEIEAINDKVKQEVEHCV 307 Query: 345 EFAQSDKEPDPAELYSDILI 364 +FA+ P EL D+ + Sbjct: 308 QFAEESPWPADDELLKDVYV 327 >gi|186685632|ref|YP_001868828.1| dehydrogenase, E1 component [Nostoc punctiforme PCC 73102] gi|186468084|gb|ACC83885.1| dehydrogenase, E1 component [Nostoc punctiforme PCC 73102] Length = 344 Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats. Identities = 143/328 (43%), Positives = 212/328 (64%), Gaps = 9/328 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG- 102 ++ KE+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ S+ G Sbjct: 14 TTQITKEEGLWLYEDMVLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVCTGVVQSMRPGE 73 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS ++ GG+ V Sbjct: 74 DYVCSTYRDHVHALSAGVPAREVMAELFGKATGCSKGRGGSMHMFSAEHRLLGGYAFVAE 133 Query: 163 QVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + + G AF +KYRR D++ FGDGAAN GQ +E+ N+AALW L +++V+ Sbjct: 134 GIPVAAGAAFQSKYRREVLGDKNADQVTACFFGDGAANNGQFFETLNMAALWKLPILFVV 193 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENN++A+G S RA++Q K+ +FN+ G++VDGMD+ AV+A +AVA RA +GP Sbjct: 194 ENNKWAIGMSHERATSQPEIYKKASAFNMVGVEVDGMDVLAVRAVAQEAVARARAGEGPT 253 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +IE LTYR+RGHS++DP R++ E E DPI+++ LL A+EG++K I+ Sbjct: 254 LIEALTYRFRGHSLADPDEMRSKAE-KEFWFARDPIKKLAAYLLEQNLANEGEIKAIDRK 312 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++ +I+ +V+FA+S EPDP+ELY + Sbjct: 313 IQDVIDEAVKFAESSPEPDPSELYRFVF 340 >gi|62897537|dbj|BAD96708.1| pyruvate dehydrogenase (lipoamide) alpha 1 variant [Homo sapiens] Length = 390 Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats. Identities = 182/370 (49%), Positives = 239/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVG----DIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G L S + AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLSGASQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 124 TFTRGLSVREILAELTGRKGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 181 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 182 KYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 241 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP Sbjct: 242 YYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILLELQTYRYHGHSMSDPGV 299 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSSLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 Query: 354 DPAELYSDIL 363 EL I Sbjct: 360 PLEELGYHIY 369 >gi|323351608|ref|ZP_08087262.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis VMC66] gi|322122094|gb|EFX93820.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis VMC66] Length = 357 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 122/349 (34%), Positives = 192/349 (55%), Gaps = 2/349 (0%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEG--FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 L +S R ++ + VD+ + EV + +KE+ + Y+ M IR FEE + + Sbjct: 7 LPQQLSKTRNQSAVSELVDLKVYDATEVEVEQVSKEKAKTMYKTMWDIRNFEENTRRFFA 66 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G + GF HL G+EA+ G+ +LT+ D + + +R HGH +A G D +MAE+ G++ Sbjct: 67 AGQIPGFVHLYAGEEAIATGVCANLTDQDYITSTHRGHGHCVAKGGDLKGMMAEIFGKET 126 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ KGKGGSMH+ G G +G+VG L TG A NKY ++D + V FGDGAAN+ Sbjct: 127 GLGKGKGGSMHIADLDKGILGANGMVGGGFGLATGAAMRNKYLKTDSVAVCFFGDGAANE 186 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G +E N+A++W L VI+V ENN +A T +SA ++R ++N+PG++V+G D+ Sbjct: 187 GNFHECLNMASIWKLPVIFVNENNLFAESTPQWYSSASGTIAERAAAYNMPGVRVNGKDL 246 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV +AV R +GP +IE +TYR GH D Y+ E + ++ D ++ Sbjct: 247 FAVYQVAKEAVERARRGEGPTLIEAVTYRDHGHFEGDEQKYKALEGEEKDWADVDALDVF 306 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R + + +E +L I RK + +++FAQ P L D+ Sbjct: 307 RDYAIEHGLLTEEELDAILEESRKDVEEAIKFAQDSPIPRSESLLEDVF 355 >gi|320102389|ref|YP_004177980.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Isosphaera pallida ATCC 43644] gi|319749671|gb|ADV61431.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Isosphaera pallida ATCC 43644] Length = 534 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 142/322 (44%), Positives = 200/322 (62%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++Q + YR ML IRRFEE++ LY + GF HL GQE V VG +L D Sbjct: 195 APPVTRDQAIGWYRTMLQIRRFEERSAMLYQQSKIKGFLHLYSGQEPVAVGSIGALRPDD 254 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +ITAYR+HGH LA G+ A MAE+ G+ G ++GKGGSMH F N F GGH IVG Sbjct: 255 YVITAYRDHGHALARGMSAKAGMAEMLGKVTGCARGKGGSMHFFDAANRFLGGHAIVGGH 314 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V L G+AFA KY+ D++C+ FGDGA NQG V+E+FN+AA+W VI+V+ENN Y+MG Sbjct: 315 VPLALGVAFAMKYQGLDQVCLCFFGDGAMNQGPVHEAFNMAAMWKCPVIFVVENNLYSMG 374 Query: 224 TSVSRASAQTNFS-KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 TS+ R+S T+ + + G ++ IPG++V+G D+ V +A A RA +GP +E++TY Sbjct: 375 TSLERSSCLTDLTIRGGTAYGIPGIKVNGNDVEEVYRVTWEAAARARAGEGPSFLEIITY 434 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+RGHSMSDP YRT EE+ E DP +L W + ++ + +++ I+ Sbjct: 435 RHRGHSMSDPGKYRTAEELEEA-KRRDPNVAYGLKLKERGWLDDAQIEALHEEIKQEIDE 493 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 ++ FA+ EP +LY DI + Sbjct: 494 AIAFAEESPEPPMEQLYQDITV 515 >gi|32564172|ref|NP_871953.1| hypothetical protein T05H10.6 [Caenorhabditis elegans] gi|26985889|emb|CAD59156.1| C. elegans protein T05H10.6b, confirmed by transcript evidence [Caenorhabditis elegans] Length = 414 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 161/319 (50%), Positives = 209/319 (65%), Gaps = 5/319 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 N+E L YR M +IRR E AG LY + GFCHL GQEA VGMK ++TEGD + Sbjct: 66 TLNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMTEGDAV 125 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG G ++++AELTGR G GKGGSMHM++ FYGG+GIVGAQ Sbjct: 126 ITAYRCHGWTWLLGATVTEVLAELTGRVAGNVHGKGGSMHMYTK--NFYGGNGIVGAQQP 183 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+A A KYR +CV +GDGAANQGQ++E+ N+A LW+L V++V ENN + MGT+ Sbjct: 184 LGAGVALAMKYREQKNVCVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMGTT 243 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R+SA T + RG +PG+ VDGMDI AV+ A YC + KGP+++EM TYRY Sbjct: 244 AERSSASTEYYTRGDY--VPGIWVDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYH 301 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YRTREEI E+R DPI + R++ + A+E +LK I+ VRK ++ ++ Sbjct: 302 GHSMSDPGTSYRTREEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEAL 361 Query: 345 EFAQSDKEPDPAELYSDIL 363 + A SD P LY+DI Sbjct: 362 KIATSDGVLPPEALYADIY 380 >gi|17536047|ref|NP_495693.1| hypothetical protein T05H10.6 [Caenorhabditis elegans] gi|1709447|sp|P52899|ODPA_CAEEL RecName: Full=Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|3879499|emb|CAA87793.1| C. elegans protein T05H10.6a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 397 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 161/319 (50%), Positives = 209/319 (65%), Gaps = 5/319 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 N+E L YR M +IRR E AG LY + GFCHL GQEA VGMK ++TEGD + Sbjct: 49 TLNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMTEGDAV 108 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG G ++++AELTGR G GKGGSMHM++ FYGG+GIVGAQ Sbjct: 109 ITAYRCHGWTWLLGATVTEVLAELTGRVAGNVHGKGGSMHMYTK--NFYGGNGIVGAQQP 166 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+A A KYR +CV +GDGAANQGQ++E+ N+A LW+L V++V ENN + MGT+ Sbjct: 167 LGAGVALAMKYREQKNVCVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMGTT 226 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 R+SA T + RG +PG+ VDGMDI AV+ A YC + KGP+++EM TYRY Sbjct: 227 AERSSASTEYYTRGDY--VPGIWVDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYH 284 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YRTREEI E+R DPI + R++ + A+E +LK I+ VRK ++ ++ Sbjct: 285 GHSMSDPGTSYRTREEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEAL 344 Query: 345 EFAQSDKEPDPAELYSDIL 363 + A SD P LY+DI Sbjct: 345 KIATSDGVLPPEALYADIY 363 >gi|125717965|ref|YP_001035098.1| pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Streptococcus sanguinis SK36] gi|125497882|gb|ABN44548.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit, putative [Streptococcus sanguinis SK36] gi|324991189|gb|EGC23123.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK353] gi|325696468|gb|EGD38358.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK160] Length = 357 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 122/349 (34%), Positives = 192/349 (55%), Gaps = 2/349 (0%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEG--FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 L +S R ++ + VD+ + EV + +KE+ + Y+ M IR FEE + + Sbjct: 7 LPQQLSKTRNQSAVSELVDLKVYDATEVEVEQVSKEKAKTMYKTMWDIRNFEENTRRFFA 66 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G + GF HL G+EA+ G+ +LT+ D + + +R HGH +A G D +MAE+ G++ Sbjct: 67 AGQIPGFVHLYAGEEAIATGVCANLTDKDYITSTHRGHGHCVAKGGDLKGMMAEIFGKET 126 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ KGKGGSMH+ G G +G+VG L TG A NKY ++D + V FGDGAAN+ Sbjct: 127 GLGKGKGGSMHIADLDKGILGANGMVGGGFGLATGAAMRNKYLKTDSVAVCFFGDGAANE 186 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G +E N+A++W L VI+V ENN +A T +SA ++R ++N+PG++V+G D+ Sbjct: 187 GNFHECLNMASIWKLPVIFVNENNLFAESTPQWYSSASGTIAERAAAYNMPGVRVNGKDL 246 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV +AV R +GP +IE +TYR GH D Y+ E + ++ D ++ Sbjct: 247 FAVYQVAKEAVERARRGEGPTLIEAVTYRDHGHFEGDEQKYKALEGEEKDWADVDALDVF 306 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R + + +E +L I RK + +++FAQ P L D+ Sbjct: 307 RDYAIEHGLLTEEELDAILEESRKDVEEAIKFAQDSPIPRSESLLEDVF 355 >gi|325694537|gb|EGD36446.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK150] Length = 357 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 122/349 (34%), Positives = 192/349 (55%), Gaps = 2/349 (0%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEG--FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 L +S R ++ + VD+ + EV + +KE+ + Y+ M IR FEE + + Sbjct: 7 LPQQLSKTRNQSAVSELVDLKVYDATEVEVEQVSKEKAKTMYKTMWDIRNFEENTRRFFA 66 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G + GF HL G+EA+ G+ +LT+ D + + +R HGH +A G D +MAE+ G++ Sbjct: 67 AGQIPGFVHLYAGEEAIATGVCANLTDKDYITSTHRGHGHCVAKGGDLKGMMAEIFGKET 126 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ KGKGGSMH+ G G +G+VG L TG A NKY ++D + V FGDGAAN+ Sbjct: 127 GLGKGKGGSMHIADLDKGILGANGMVGGGFGLATGAAMRNKYLKTDSVAVCFFGDGAANE 186 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G +E N+A++W L VI+V ENN +A T +SA ++R ++N+PG++V+G D+ Sbjct: 187 GNFHECLNMASIWKLPVIFVNENNLFAESTPQWYSSASGTIAERAAAYNMPGVRVNGKDL 246 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV +AV R +GP +IE +TYR GH D Y+ E + ++ D ++ Sbjct: 247 FAVYQVAKEAVERARRGEGPTLIEAVTYRDHGHFEGDEQKYKALEGEEKDWADVDALDVF 306 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R + + +E +L I RK + +++FAQ P L D+ Sbjct: 307 RDYAIEHGLLTEEELDAILEESRKDVEEAIKFAQDSPIPRTESLLEDVF 355 >gi|323136471|ref|ZP_08071553.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylocystis sp. ATCC 49242] gi|322398545|gb|EFY01065.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Methylocystis sp. ATCC 49242] Length = 333 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 197/320 (61%), Positives = 258/320 (80%), Gaps = 1/320 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + +F +++EL+A+R MLLIRRFEEKAGQLYGMG++ GFCHL IGQEAV+VG+KM+ EG Sbjct: 13 PIPDFTRDEELAAFREMLLIRRFEEKAGQLYGMGVIAGFCHLYIGQEAVVVGVKMAAREG 72 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 DQ T+YR+HGH+LA G+D +MAEL G++GG SKGKGGSMHMFS + F+GGHGIVGA Sbjct: 73 DQFTTSYRDHGHMLASGMDPKGVMAELAGKRGGYSKGKGGSMHMFSLEKNFFGGHGIVGA 132 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 +G GIAFAN YR D++ + FG+GAANQGQVYE+FN+AALW L V++++ENN+YAM Sbjct: 133 PAPIGAGIAFANAYRGEDRVSLTFFGEGAANQGQVYETFNMAALWKLPVLFIVENNRYAM 192 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTS++RASAQ +FS+RG +F IPG Q+DGMD+R V+A +A+ +CR GP ++E+ TY Sbjct: 193 GTSIARASAQKDFSRRGAAFAIPGKQIDGMDVRVVRAAAAEALDWCRKGNGPYLLEVQTY 252 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSDPA YR++EE+ +MR HDPIEQVR RLL + SE +LK+I+ VRKI+ Sbjct: 253 RYRGHSMSDPAKYRSKEEVQKMREEHDPIEQVRIRLLADGV-SEDELKKIDAAVRKIVAE 311 Query: 343 SVEFAQSDKEPDPAELYSDI 362 + +FA SDKEPDP EL++D+ Sbjct: 312 AADFAVSDKEPDPGELWTDV 331 >gi|254422126|ref|ZP_05035844.1| pyruvate dehydrogenase E1 component, alpha subunit [Synechococcus sp. PCC 7335] gi|196189615|gb|EDX84579.1| pyruvate dehydrogenase E1 component, alpha subunit [Synechococcus sp. PCC 7335] Length = 342 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 135/327 (41%), Positives = 194/327 (59%), Gaps = 8/327 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +EQ L Y MLL R FE+K +LY G V GF HL GQEAV G+ + D Sbjct: 14 TPQITREQGLLVYEDMLLGRYFEDKCAELYQRGKVKGFVHLYNGQEAVASGVIKVMRSDD 73 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + YR+H H L+ GV A ++MAEL G++ G SKG+GGSMHMFS ++ GG +G Sbjct: 74 YVCSTYRDHVHSLSAGVPAREVMAELFGKETGCSKGRGGSMHMFSKEHNVLGGFAFIGEG 133 Query: 164 VSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + + G AF ++YR+ D++ FGDG N GQ +E N+AALW L +I+V+E Sbjct: 134 IPVALGAAFQSRYRKEAMGDASADQVTAAFFGDGTTNNGQFFECLNMAALWKLPIIFVVE 193 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN++A+G + RAS+QT K+ F +PG +VDGMD+ AV+A A+ RA +GP + Sbjct: 194 NNKWAIGMAHERASSQTEIYKKASVFGMPGYEVDGMDVLAVRAAAKTAIDRARAGEGPTL 253 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +E LTYRYRGHS++DP R +E R + DPI++ LL SE +LK + + Sbjct: 254 LECLTYRYRGHSVADPDELRDPDEKKFWR-DRDPIKRFEAYLLEQSLVSEAELKAVRDKI 312 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 ++ +S+ FA+ P P +LY I Sbjct: 313 TDVVEDSLTFAEESPNPSPDDLYKYIF 339 >gi|321468559|gb|EFX79543.1| hypothetical protein DAPPUDRAFT_304437 [Daphnia pulex] Length = 399 Score = 351 bits (902), Expect = 8e-95, Method: Composition-based stats. Identities = 163/339 (48%), Positives = 221/339 (65%), Gaps = 7/339 (2%) Query: 27 ATSSVDCVDIPFLEGFEVS--EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 A+ + LE + +++ L Y+ M +IRR E AG LY ++ GFCHL Sbjct: 35 ASFDTKPFKLHKLEEGPSTSVTLSRQDALKYYKDMQMIRRMETAAGNLYKEKIIRGFCHL 94 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 GQEA VGM+ S+ D +ITAYR HG GVD + +++ELTGR G +GKGGSM Sbjct: 95 YSGQEACCVGMRASMRSYDAVITAYRAHGWTYMMGVDPAGVLSELTGRSTGCQRGKGGSM 154 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+ FYGG+GIVGAQ LG G+A A KY+ +D +C+ +GDGAANQGQ+YE+ NIA Sbjct: 155 HMYIK--NFYGGNGIVGAQQPLGAGVALALKYQGTDGVCLTLYGDGAANQGQLYEAMNIA 212 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 LW L VI++ ENN Y MGTSV RASA TN+ RG +PG+ VDGMD+ AV+ A Sbjct: 213 QLWKLPVIFICENNGYGMGTSVDRASASTNYYTRGDY--VPGIWVDGMDVLAVREATRFA 270 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKW 323 + +C KGP+++E++TYRY GHSMSDP YR+R+EI E+R DPI R+RLL Sbjct: 271 IDHCATGKGPMVMEVVTYRYSGHSMSDPGTSYRSRDEIQEVRQTRDPITGFRERLLSTSL 330 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 A+ +LK+I+ VR++I ++V+ A++DKE EL +DI Sbjct: 331 ATAEELKDIDQEVRQVIEDAVKRAKADKEIGLEELTADI 369 >gi|327470072|gb|EGF15536.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK330] Length = 357 Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats. Identities = 122/349 (34%), Positives = 193/349 (55%), Gaps = 2/349 (0%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEG--FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 L ++ R+ + + VD+ + EV + +KE+ + Y+ M IR FEE + + Sbjct: 7 LPQRLTKTRSQGAVSELVDLKVHDATEVEVEQISKEKAKTMYKTMWDIRNFEENTRRFFA 66 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G + GF HL G+EA+ G+ +LT+ D + + +R HGH +A G D +MAE+ G++ Sbjct: 67 AGQIPGFVHLYAGEEAIATGVCANLTDQDYITSTHRGHGHCVAKGGDLKGMMAEIFGKET 126 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ KGKGGSMH+ G G +G+VG L TG A NKY ++D + V FGDGAAN+ Sbjct: 127 GLGKGKGGSMHIADLDKGILGANGMVGGGFGLATGAAMRNKYLKTDSVAVCFFGDGAANE 186 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G +E N+A++W L VI+V ENN +A T +SA ++R ++N+PG++V+G D+ Sbjct: 187 GNFHECLNMASIWKLPVIFVNENNFFAESTPQWYSSASGTIAERAAAYNMPGVRVNGKDL 246 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV +AV R +GP +IE +TYR GH D Y+ E + ++ D ++ Sbjct: 247 FAVYQVAKEAVERARRGEGPTLIEAVTYRDHGHFEGDEQKYKALEGEEKDWADVDALDVF 306 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R + + +E +L I RK + +++FAQ P P L D+ Sbjct: 307 RDYAIEHGLLTEEELDAILEESRKDVEEAIKFAQDSPIPRPDSLLEDVF 355 >gi|332360412|gb|EGJ38223.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK355] Length = 357 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 122/349 (34%), Positives = 193/349 (55%), Gaps = 2/349 (0%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEG--FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 L ++ R+ + + VD+ + EV + +KE+ + Y+ M IR FEE + + Sbjct: 7 LPQRLTKTRSQGAVSELVDLKVHDATEVEVEQISKEKAKTMYKTMWDIRNFEENTRRFFA 66 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G + GF HL G+EA+ G+ +LT+ D + + +R HGH +A G D +MAE+ G++ Sbjct: 67 AGQIPGFVHLYAGEEAIATGVCANLTDQDYITSTHRGHGHCVAKGGDLKGMMAEIFGKET 126 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ KGKGGSMH+ G G +G+VG L TG A NKY ++D + V FGDGAAN+ Sbjct: 127 GLGKGKGGSMHIADLDKGILGANGMVGGGFGLATGAAMRNKYLKTDSVAVCFFGDGAANE 186 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G +E N+A++W L VI+V ENN +A T +SA ++R ++N+PG++V+G D+ Sbjct: 187 GNFHECLNMASIWKLPVIFVNENNLFAESTPQWYSSASGTIAERAAAYNMPGIRVNGKDL 246 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV +AV R +GP +IE +TYR GH D Y+ E + ++ D ++ Sbjct: 247 FAVYQVAKEAVERARRGEGPTLIEAVTYRDHGHFEGDEQRYKALEGEEKDWADVDALDVF 306 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R + + +E +L I RK + +++FAQ P P L D+ Sbjct: 307 RDYAIEHGLLTEDELDAILEESRKDVEEAIKFAQDSPIPRPDSLLEDVF 355 >gi|255558342|ref|XP_002520198.1| pyruvate dehydrogenase, putative [Ricinus communis] gi|223540690|gb|EEF42253.1| pyruvate dehydrogenase, putative [Ricinus communis] Length = 399 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 151/320 (47%), Positives = 218/320 (68%), Gaps = 4/320 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + ++ LS +R M +RR E A LY ++ GFCHL GQEAV VGM+ ++T+ D + Sbjct: 63 DTTPQELLSFFRDMATMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCI 122 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H + G ++ AEL GR+ G S+GKGGSMH + + GFYGGHGIVGAQ+ Sbjct: 123 ITAYRDHCTFVGRGGTMLQVFAELMGRKDGCSRGKGGSMHFYKKEAGFYGGHGIVGAQIP 182 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA KY + + + +GDGAANQGQ++E+ NI+ALW+L VI V ENN Y MGT+ Sbjct: 183 LGCGLAFAQKYNKDETVTFALYGDGAANQGQLFEALNISALWDLPVILVCENNHYGMGTA 242 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RA+ + KRG +PG++VDGMD+ AVK A + + GP+I+EM TYRY Sbjct: 243 EWRAAKSPAYYKRGDY--VPGLKVDGMDVLAVKQACKFAKEFVLKN-GPLILEMDTYRYH 299 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP + YRTR+EI+ +R DPIE++RK +L + A+E +LK++E +RK I++++ Sbjct: 300 GHSMSDPGSTYRTRDEISGVRQERDPIERIRKVILAHDLATEKELKDMEKEIRKEIDDAI 359 Query: 345 EFAQSDKEPDPAELYSDILI 364 A+ P+P+EL++++ + Sbjct: 360 AQAKESPMPEPSELFTNVYV 379 >gi|15223294|ref|NP_171617.1| PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA); pyruvate dehydrogenase (acetyl-transferring) [Arabidopsis thaliana] gi|2454182|gb|AAB86803.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|15450707|gb|AAK96625.1| At1g01090/T25K16_8 [Arabidopsis thaliana] gi|17380622|gb|AAL36074.1| At1g01090/T25K16_8 [Arabidopsis thaliana] gi|110742108|dbj|BAE98984.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|332189112|gb|AEE27233.1| pyruvate dehydrogenase E1 component subunit alpha [Arabidopsis thaliana] Length = 428 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 138/354 (38%), Positives = 205/354 (57%), Gaps = 8/354 (2%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEF-NKEQELSAYRLMLLIRRFEEKAGQLYGM 75 LN S + +R+ SV V S KE+ L Y M+L R FE+ Q+Y Sbjct: 48 LNHSNATRRSPVVSVQEVVKEKQSTNNTSLLITKEEGLELYEDMILGRSFEDMCAQMYYR 107 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 G + GF HL GQEAV G LT+ D +++ YR+H H L+ GV A +M+EL G+ G Sbjct: 108 GKMFGFVHLYNGQEAVSTGFIKLLTKSDSVVSTYRDHVHALSKGVSARAVMSELFGKVTG 167 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS------DKICVVCFGD 189 +G+GGSMHMFS ++ GG +G + + TG AF++KYRR D + V FGD Sbjct: 168 CCRGQGGSMHMFSKEHNMLGGFAFIGEGIPVATGAAFSSKYRREVLKQDCDDVTVAFFGD 227 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 G N GQ +E N+AAL+ L +I+V+ENN +A+G S RA++ K+G +F +PG+ V Sbjct: 228 GTCNNGQFFECLNMAALYKLPIIFVVENNLWAIGMSHLRATSDPEIWKKGPAFGMPGVHV 287 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHD 309 DGMD+ V+ +AV R +GP ++E TYR+RGHS++DP R E + + D Sbjct: 288 DGMDVLKVREVAKEAVTRARRGEGPTLVECETYRFRGHSLADPDELRDAAEKAKY-AARD 346 Query: 310 PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 PI ++K L+ NK A E +LK IE + +++ +VEFA + +P ++L ++ Sbjct: 347 PIAALKKYLIENKLAKEAELKSIEKKIDELVEEAVEFADASPQPGRSQLLENVF 400 >gi|302389987|ref|YP_003825808.1| dehydrogenase E1 component [Thermosediminibacter oceani DSM 16646] gi|302200615|gb|ADL08185.1| dehydrogenase E1 component [Thermosediminibacter oceani DSM 16646] Length = 319 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 130/318 (40%), Positives = 192/318 (60%), Gaps = 1/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + KE+ L YR M IRRFE + +L+ M+ G CHL +G+EA VG +L D + Sbjct: 2 DLTKEKRLWMYRKMYEIRRFELEVDRLFKANMIWGTCHLSVGEEATAVGAIAALEADDMI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G ++ AEL GR+ G +G+GGSMH+ + G G +GIVG V Sbjct: 62 TSTHRGHGHCIAKGGRLPQMFAELLGRETGYCRGRGGSMHIADIETGNLGANGIVGGGVP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + TG A A+K ++ K+ + FGDGA NQG +ES NIA+LW L V+Y+ ENN Y M + Sbjct: 122 IATGAALASKMKKDGKVTLCFFGDGANNQGVFHESLNIASLWRLPVVYLCENNLYGMSVA 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 SR++A N + R ++++PG VDG D+ AV + KAV R +GP +IE TYR+ Sbjct: 182 FSRSTAVKNVADRAAAYDMPGEIVDGNDVEAVYHVVKKAVERARRGEGPSLIEAKTYRWL 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS SD YRT+EEI E + PI++ R +L+ K A+E +L IE V + I +++E Sbjct: 242 GHSKSDANVYRTKEEIEEWKQK-CPIKRYRLKLVEEKIATEEELDRIEKEVEREIQDAIE 300 Query: 346 FAQSDKEPDPAELYSDIL 363 +A++ EP ++ + Sbjct: 301 YAKNSPEPSLEDIADGVY 318 >gi|19115804|ref|NP_594892.1| pyruvate dehydrogenase e1 component alpha subunit Pda1 [Schizosaccharomyces pombe 972h-] gi|1709451|sp|Q10489|ODPA_SCHPO RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|1314172|emb|CAA97360.1| pyruvate dehydrogenase e1 component alpha subunit Pda1 [Schizosaccharomyces pombe] Length = 409 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 156/368 (42%), Positives = 212/368 (57%), Gaps = 13/368 (3%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAYRLM 59 + VT NP+ + +D EG+++ E K + L Y M Sbjct: 26 RRVTTDATTSRANPAHVPEEHDKPFPVKLDDSVFEGYKIDVPSTEIEVTKGELLGLYEKM 85 Query: 60 LLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACG 119 + IRR E LY + GFCHL IGQEAV G++ ++T D +IT+YR HG G Sbjct: 86 VTIRRLELACDALYKAKKIRGFCHLSIGQEAVAAGIEGAITLDDSIITSYRCHGFAYTRG 145 Query: 120 VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 + I+ EL GRQ G SKGKGGSMH+F FYGG+GIVGAQ+ LG GI FA KY Sbjct: 146 LSIRSIIGELMGRQCGASKGKGGSMHIF--AKNFYGGNGIVGAQIPLGAGIGFAQKYLEK 203 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 +GDGA+NQGQ +E+FN+A LW L VI+ ENN+Y MGTS R+SA T F KRG Sbjct: 204 PTTTFALYGDGASNQGQAFEAFNMAKLWGLPVIFACENNKYGMGTSAERSSAMTEFYKRG 263 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTR 298 IPG+ V+GMD+ AV A Y + P+++E +TYRY GHSMSDP YR+R Sbjct: 264 QY--IPGLLVNGMDVLAVLQASKFAKKYTVENSQPLLMEFVTYRYGGHSMSDPGTTYRSR 321 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--A 356 EE+ ++R+ DPIE ++K ++ A+ +LK IE +R +++ V A+ PDP Sbjct: 322 EEVQKVRAARDPIEGLKKHIMEWGVANANELKNIEKRIRGMVDEEVRIAEESPFPDPIEE 381 Query: 357 ELYSDILI 364 L+SD+ + Sbjct: 382 SLFSDVYV 389 >gi|229544154|ref|ZP_04433213.1| Pyruvate dehydrogenase (acetyl-transferring) [Bacillus coagulans 36D1] gi|229325293|gb|EEN90969.1| Pyruvate dehydrogenase (acetyl-transferring) [Bacillus coagulans 36D1] Length = 330 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 121/319 (37%), Positives = 178/319 (55%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + KE+ + M IR+FE+K +++ G++ GF HL G+EAV VG+ L + D + Sbjct: 10 QLTKEKAQWMLQKMFEIRKFEDKVHEVFATGILPGFVHLYAGEEAVAVGVCAHLNDQDMI 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 70 TSTHRGHGHCIAKGCDLKGMMAEIYGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 129 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A K +++ + V FGDGA N G +E N+AA+W L VI+V ENN Y T Sbjct: 130 LACGAALTAKVKKTSNVSVCFFGDGANNHGTFHEGINLAAVWKLPVIFVAENNGYGEATP 189 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + R V+++IPG++VDG DI AV +AV R +GP +IE +TYR Sbjct: 190 FHYASSCKTIADRAVAYDIPGVRVDGKDIVAVYQAAKEAVERARNGEGPSLIECVTYRNY 249 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D Y+ E + + D I Q +K +L SE D+ +E V + I +V+ Sbjct: 250 GHFEGDAQTYKAEAEKAKQLNEKDAIVQFKKFVLEQNLFSEADINSLEQKVEQEIEEAVK 309 Query: 346 FAQSDKEPDPAELYSDILI 364 F++ PDP+EL D+ + Sbjct: 310 FSEESPYPDPSELLKDVYV 328 >gi|189053388|dbj|BAG35194.1| unnamed protein product [Homo sapiens] Length = 390 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 181/370 (48%), Positives = 238/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVG----DIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G L S + AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLSGASQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 124 TFTRGLSVREILAELTGRKGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 181 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 182 KYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 241 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ K PI++E+ TYRY GHSMSDP Sbjct: 242 YYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKEPILMELQTYRYHGHSMSDPGV 299 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 Query: 354 DPAELYSDIL 363 EL I Sbjct: 360 PLEELGYHIY 369 >gi|156842366|ref|XP_001644551.1| hypothetical protein Kpol_1052p41 [Vanderwaltozyma polyspora DSM 70294] gi|156115196|gb|EDO16693.1| hypothetical protein Kpol_1052p41 [Vanderwaltozyma polyspora DSM 70294] Length = 408 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 151/330 (45%), Positives = 214/330 (64%), Gaps = 11/330 (3%) Query: 42 FEVSEF----NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 +V + NK+ L Y+ M+++RR E LY + GFCHL +GQEA+ VG++ Sbjct: 55 LDVPDLAFNTNKQTLLQMYKDMVIVRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIEN 114 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 ++T D +IT+YR HG G I+AEL G++ G+S GKGGSMH+F+ GFYGG+ Sbjct: 115 AITHKDSVITSYRCHGFTYMRGASVKAILAELMGKRSGVSFGKGGSMHLFAP--GFYGGN 172 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GIVGAQV LG G+AFA++Y+ D +GDGA+NQGQV+ES+N+A LWNL V++ EN Sbjct: 173 GIVGAQVPLGAGLAFAHQYKNEDACSFTLYGDGASNQGQVFESYNMAKLWNLPVVFACEN 232 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N+Y MGT+ SR+SA T++ KRG IPG++V+GMDI AV A +C + KGP+++ Sbjct: 233 NKYGMGTAASRSSAITDYYKRGQY--IPGLKVNGMDILAVYQASKFAKEWCISGKGPLVL 290 Query: 278 EMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E TYRY GHSMSDP YRTR+EI MRS +DPI ++ LL A+E ++K + + Sbjct: 291 EYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKLHLLELGIATEAEIKAYDKSA 350 Query: 337 RKIINNSVEFAQSD--KEPDPAELYSDILI 364 RK ++ V A + EP + L+ D+ + Sbjct: 351 RKYVDEQVALADAAAPPEPKLSILFEDVYV 380 >gi|295704000|ref|YP_003597075.1| acetoin dehydrogenase E1 component subunit alpha [Bacillus megaterium DSM 319] gi|294801659|gb|ADF38725.1| acetoin dehydrogenase E1 component, alpha subunit [Bacillus megaterium DSM 319] Length = 330 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 123/322 (38%), Positives = 185/322 (57%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + + KE+ Y+ M+ IR+FE++ Q++ G++ GF HL G+EA+ VGM L + Sbjct: 7 KTEKLTKEKASWMYQKMVEIRKFEDEVHQIFAKGVLPGFVHLYAGEEAIAVGMCAHLNDS 66 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HGH +A G D +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 67 DSITSTHRGHGHCIAKGGDLDGMMAELFGKVTGLGKGKGGSMHIADLDKGILGANGIVGG 126 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 L G A KY+++ + V FGDGA N+G +E N+AA+W L V++V ENN Y Sbjct: 127 GFPLACGSALTAKYKKTKDVSVCFFGDGAGNEGTFHEGINLAAIWKLPVVFVAENNGYGE 186 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S AS+ + + R S+NIPG++VDG D+ AV +A+ R +GP +IE +TY Sbjct: 187 ATPFSYASSCSTIADRAASYNIPGVRVDGKDVMAVYEAAAEAIQRARRGEGPTLIECVTY 246 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D Y++ E E D I LL + +E +L++IE +V K + Sbjct: 247 RNYGHFEGDAQTYKSGSEKKEHLQEKDAIALFENYLLSEQVVTEKELRDIEGDVEKAVKR 306 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 +VE A++ PD +EL +D+ + Sbjct: 307 AVELAETSDYPDASELLTDVYV 328 >gi|157691953|ref|YP_001486415.1| pyruvate dehydrogenase (acetyl-transferring) E1 component alpha subunit [Bacillus pumilus SAFR-032] gi|157680711|gb|ABV61855.1| pyruvate dehydrogenase (acetyl-transferring) E1 component alpha subunit [Bacillus pumilus SAFR-032] Length = 327 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 126/318 (39%), Positives = 190/318 (59%), Gaps = 1/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + + E+ Y+ M L+R F+EK Q + G++ G HLC+GQEA VG L + D++ Sbjct: 10 QISHERLAGLYKQMWLVRYFDEKVDQFFAKGLIHGTTHLCVGQEASAVGSIAVLKDEDKI 69 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ++ +R HGH +A G + +K+MAEL GR+ G KGKGGSMH+ + G G +GIVG + Sbjct: 70 VSTHRGHGHCIAKGAEVNKMMAELFGRETGYCKGKGGSMHIADLEKGNLGANGIVGGGIP 129 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L TG A +K ++ + + FGDGA N+G +E+ N+A++W+L V+++ ENNQY M Sbjct: 130 LATGAALTSKMKQEGFVVLCFFGDGATNEGSFHEALNLASIWDLPVVFICENNQYGMSGP 189 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V + S R S+ IPG +DG D+ + T+D+AV+ RA +GP +IEM TYR++ Sbjct: 190 VKEMINIEDISTRAESYGIPGKSIDGNDMVDIMNTVDEAVSRARAGEGPSLIEMKTYRWK 249 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS SD YRTREE E R D I++ + L+ +E ++ ++ I SVE Sbjct: 250 GHSKSDAKKYRTREEETEWRQK-DGIKRFKSLLIELNVLTEEQAAVLQEEAKQEIEASVE 308 Query: 346 FAQSDKEPDPAELYSDIL 363 FA++ KEP L D+ Sbjct: 309 FAKNSKEPSIDTLLEDVY 326 >gi|320583598|gb|EFW97811.1| E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex [Pichia angusta DL-1] Length = 394 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 156/360 (43%), Positives = 219/360 (60%), Gaps = 17/360 (4%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFN---------KEQELSAYRLMLLIRRFEE 67 ++P ++ A S + +D+P FE E + K L Y+ M++IRR E Sbjct: 13 VSPRLARTLATESDIVRIDLPET-SFETYELDAPELTFETEKSTLLQMYKDMVIIRRMEM 71 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 A LY + GFCHL +GQEA+ VG++ ++ D +IT+YR HG G ++ Sbjct: 72 AADALYKAKKIRGFCHLSVGQEAIAVGIENAIDGNDDVITSYRCHGFTYMRGAPVKAVLG 131 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 EL G++ G+S GKGGSMHM++ GFYGG+GIVGAQV LG G+AFA++YR + Sbjct: 132 ELMGKRCGVSYGKGGSMHMYAP--GFYGGNGIVGAQVPLGAGLAFAHQYRDKPNCTFTLY 189 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGAANQGQV+ESFN+A LWNL I+ ENN+Y MGTS SR+SA + KRG IPG+ Sbjct: 190 GDGAANQGQVFESFNMAKLWNLPCIFACENNKYGMGTSASRSSAMVEYYKRGQY--IPGL 247 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRS 306 +V+GMDI AV A +C + GP+++E TYRY GHSMSDP YRTREE+ MRS Sbjct: 248 KVNGMDILAVYQASKFAKDWCISGNGPLVLEYETYRYGGHSMSDPGTTYRTREEVQNMRS 307 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AELYSDILI 364 +DPI ++ LL A+E ++K + + RK ++ V+ A+ P+ L+ D+ + Sbjct: 308 RNDPISGLKAHLLEFGIATEDEIKAFDKSARKYVDEQVKEAEISPPPEAKMDILFEDVYV 367 >gi|284929317|ref|YP_003421839.1| pyruvate dehydrogenase E1 component subunit alpha [cyanobacterium UCYN-A] gi|284809761|gb|ADB95458.1| pyruvate dehydrogenase E1 component, alpha subunit [cyanobacterium UCYN-A] Length = 343 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 141/336 (41%), Positives = 211/336 (62%), Gaps = 10/336 (2%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 +P + + + +K++ L Y M+L R FE+K ++Y G + GF HL GQEA+ G+ Sbjct: 7 LPTFDTMSI-QLSKDEGLMLYEDMILGRLFEDKCAEMYYRGKMFGFVHLYNGQEAISTGI 65 Query: 96 KMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 +L G D + + YR+H H L+CG+ +IMAEL G++ G SKG+GGSMH+FS K+ F Sbjct: 66 IKALRSGEDYIASTYRDHVHALSCGIPPREIMAELFGKETGCSKGRGGSMHLFSKKHRFL 125 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALW 207 GG+ V + + TG AF NKYR D++ FGDGA+N GQ YE N+AALW Sbjct: 126 GGYAFVAEGIPVATGAAFQNKYRHQVMGDDNADQVTACFFGDGASNNGQFYECLNMAALW 185 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 L +IYV+ENN++A+G S RA++Q K+ FN+ G++VDGMD+ AV+ +AVA Sbjct: 186 KLPIIYVVENNKWAIGMSHDRATSQPEIYKKASVFNMVGVEVDGMDVLAVRQVAKEAVAR 245 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 RA +GP +IE LTYR+RGHS++DP R +E + DPI+++ L++ AS+ Sbjct: 246 ARAGEGPTLIEALTYRFRGHSLADPDELRKLDE-KKFWEQKDPIQKLSNYLINQNIASQT 304 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +L I+ V+ II+++VEFA++ +P ELY + Sbjct: 305 ELDTIQEKVKIIIDDAVEFAENSPDPKTNELYRYVF 340 >gi|197099370|ref|NP_001127663.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor [Pongo abelii] gi|62510771|sp|Q5R490|ODPA_PONAB RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor gi|55733496|emb|CAH93426.1| hypothetical protein [Pongo abelii] Length = 390 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 181/370 (48%), Positives = 238/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVG----DIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G L S + AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLSGASQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 124 TFTRGLSVREILAELTGRKGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 181 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++ ++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 182 KYNGKDEVCLTLYGDGAANQGQIFGAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 241 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP Sbjct: 242 YYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGV 299 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 Query: 354 DPAELYSDIL 363 EL I Sbjct: 360 PLEELGYHIY 369 >gi|323703752|ref|ZP_08115391.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Desulfotomaculum nigrificans DSM 574] gi|323531276|gb|EGB21176.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Desulfotomaculum nigrificans DSM 574] Length = 319 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 133/318 (41%), Positives = 186/318 (58%), Gaps = 1/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E N+ L YR ML IR FEE A L+ G + GF HL G+EAV VG+ L GD + Sbjct: 2 ELNENALLKMYRTMLTIREFEETASTLFANGEIPGFVHLYSGEEAVAVGIISQLEPGDYI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH+++ G D + AEL G++ G KGKGGSMH+ GF G +GIVGA + Sbjct: 62 ASTHRGHGHMISRGGDIKLMFAELFGKKTGYCKGKGGSMHIADVSLGFLGANGIVGAGLP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G AFA KY+++ + V FGDGA+N+G ++ES NIA++W L I+V ENN Y + + Sbjct: 122 LAAGAAFACKYKKNGGVAVCFFGDGASNRGTLHESLNIASIWKLPAIFVCENNMYGISMN 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + R ++ IPG+ VDG ++ AV +A+ R +GP +IE TYRYR Sbjct: 182 QKNHQNINDIADRASAYGIPGVSVDGNNVMAVFEAGQEAIKRARNGEGPTLIECKTYRYR 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH DP YR EE+ DPIEQ +KRL+ +E + I VR +I VE Sbjct: 242 GHFEGDPTVYRPDEEVQYW-KQRDPIEQFKKRLVEMNVLTEEQDQAIRSEVRNLIREGVE 300 Query: 346 FAQSDKEPDPAELYSDIL 363 FA++ + PD +EL +D+ Sbjct: 301 FARNSEYPDVSELLTDVY 318 >gi|295402194|ref|ZP_06812152.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacillus thermoglucosidasius C56-YS93] gi|312111438|ref|YP_003989754.1| pyruvate dehydrogenase (acetyl-transferring) [Geobacillus sp. Y4.1MC1] gi|294975785|gb|EFG51405.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacillus thermoglucosidasius C56-YS93] gi|311216539|gb|ADP75143.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacillus sp. Y4.1MC1] Length = 330 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 125/322 (38%), Positives = 180/322 (55%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E KE+ Y+ M IR+FE+K +++ G++ GF HL G+EAV VG+ L E Sbjct: 7 ESKSLTKEKAKWMYQKMQEIRQFEDKVHEIFSRGILPGFVHLYAGEEAVAVGVCAHLHEN 66 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HGH +A G D + +MAE+ G+ G+ KGKGGSMH+ + G G +GIVG Sbjct: 67 DYITSTHRGHGHCIAKGCDLNGMMAEIYGKATGLCKGKGGSMHIADVEKGMLGANGIVGG 126 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 L G K +++ I V FGDGA N G +E N+AA+W L V++V ENN YA Sbjct: 127 GFPLAVGAGLTAKLKKTGAIAVCFFGDGANNHGTFHEGINLAAIWKLPVVFVAENNGYAE 186 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T AS+ N + R ++NIPG VDG D+ AV ++A+ R +GP +IE TY Sbjct: 187 ATPFEYASSCKNIADRAAAYNIPGEIVDGKDVIAVYEAAERAITRARNGEGPTLIECKTY 246 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D Y++ EE + D I + R +L N+ SE +L EIE NV + I Sbjct: 247 RNYGHFEGDAQTYKSAEEKEKHLKELDAIVRFRNYILSNQLLSEQELLEIEQNVTEAIEK 306 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 +V+FA+ P +L D+ + Sbjct: 307 AVDFAEKSPFPAEEDLLKDVYV 328 >gi|268529702|ref|XP_002629977.1| Hypothetical protein CBG13339 [Caenorhabditis briggsae] Length = 397 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 164/364 (45%), Positives = 222/364 (60%), Gaps = 14/364 (3%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS--EFNKEQELSAYRLML 60 + + +++A + VS + L+ + NKE L YR M Sbjct: 11 LTASGIRTQQVRLASSTEVSF------HTKPCKLHKLDSGPNTSVTLNKEDALKYYRDMQ 64 Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 +IRR AG LY + GFCHL GQEA VGMK ++TEGD +ITAYR HG G Sbjct: 65 VIRRM-SAAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMTEGDAVITAYRCHGWTWLLGA 123 Query: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 ++++AELTGR G GKGGSMHM++ FYGG+GIVGAQ LG G+A A KYR Sbjct: 124 TVTEVLAELTGRIAGNVHGKGGSMHMYTK--NFYGGNGIVGAQQPLGAGVALAMKYREQK 181 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 +CV +GDGAANQGQ++E+ N+A LW+L V++V ENN + MGT+V R+SA T + RG Sbjct: 182 NVCVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMGTAVERSSASTEYYTRGD 241 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTRE 299 +PG+ VDGMDI AV+ A YC + KGP+++EM TYRY GHSMSDP YRTR+ Sbjct: 242 Y--VPGIWVDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYHGHSMSDPGTSYRTRD 299 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 EI E+R DPI + R++ + A+E +LK I+ VRK ++ +++ A SD P L+ Sbjct: 300 EIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEALKIATSDGVLPPEALF 359 Query: 360 SDIL 363 +DI Sbjct: 360 TDIY 363 >gi|39997538|ref|NP_953489.1| dehydrogenase complex, E1 component subunit alpha [Geobacter sulfurreducens PCA] gi|39984429|gb|AAR35816.1| dehydrogenase complex, E1 component, alpha subunit [Geobacter sulfurreducens PCA] Length = 325 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 135/318 (42%), Positives = 192/318 (60%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + L + M+L R FEE + Y G + GF HL GQEAV VG +L + D ++ Sbjct: 9 LPDSELLKMHEQMVLSREFEESCAEQYTKGHITGFLHLYSGQEAVAVGATAALRKDDYIL 68 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +AYREH + G + ++MAEL G+ G+ KGKGGSMH+F F GG+ IVG Q + Sbjct: 69 SAYREHAQAIVRGAEPRRVMAELFGKATGMCKGKGGSMHLFDPSLAFMGGYAIVGGQFPI 128 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+AFA+KYR+ +I FGDGA NQG +ES N A LW L V+++ ENN Y +GT+V Sbjct: 129 AVGLAFASKYRKEGRISACFFGDGAVNQGTFHESLNWARLWELPVLFICENNFYGIGTAV 188 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 SRASA ++ KR ++IP ++VDGMD+ AV + + R H P +IE +TYR+RG Sbjct: 189 SRASALSDIHKRTCGYDIPSVRVDGMDVMAVHEAVKWGAEWVREHSRPYLIEAMTYRFRG 248 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSM+DP YR+ E+ +S DPI KRL+ A+E +L + R ++ ++V F Sbjct: 249 HSMADPGKYRSAAEVELWKS-RDPIPNFEKRLVEEGIATEAELAAVLEKCRGVVADAVAF 307 Query: 347 AQSDKEPDPAELYSDILI 364 A+ P+ E+YSDI + Sbjct: 308 AEESPWPEDDEVYSDIYV 325 >gi|324992938|gb|EGC24858.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK405] gi|324994435|gb|EGC26348.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK678] gi|325687432|gb|EGD29453.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK72] gi|327462234|gb|EGF08561.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1] gi|327474254|gb|EGF19661.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK408] gi|327489589|gb|EGF21381.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1058] Length = 357 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 122/349 (34%), Positives = 192/349 (55%), Gaps = 2/349 (0%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEG--FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 L +S R ++ + VD+ + EV + +KE+ + Y+ M IR FEE + + Sbjct: 7 LPQQLSKTRNQSAVSELVDLKVYDATEVEVEQVSKEKAKTMYKTMWDIRNFEENTRRFFA 66 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G + GF HL G+EA+ G+ +LT+ D + + +R HGH +A G D +MAE+ G++ Sbjct: 67 AGQIPGFVHLYAGEEAIATGVCANLTDKDYITSTHRGHGHCVAKGGDLKGMMAEIFGKET 126 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ KGKGGSMH+ G G +G+VG L TG A NKY ++D + V FGDGAAN+ Sbjct: 127 GLGKGKGGSMHIADLDKGILGANGMVGGGFGLATGAAMRNKYLKTDSVAVCFFGDGAANE 186 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G +E N+A++W L VI+V ENN +A T +SA ++R ++N+PG++V+G D+ Sbjct: 187 GNFHECLNMASIWKLPVIFVNENNLFAESTPQWYSSASGTIAERAAAYNMPGVRVNGKDL 246 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV +AV R +GP +IE +TYR GH D Y+ E + ++ D ++ Sbjct: 247 FAVYQVAKEAVERARRGEGPTLIEAVTYRDHGHFEGDEQKYKALEGEEKDWADVDALDVF 306 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R + + +E +L I RK + +++FAQ P L D+ Sbjct: 307 RDYAIEHGLLTEEELDAILEESRKDVEEAIKFAQDSPIPRCESLLEDVF 355 >gi|189339284|ref|NP_001104283.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial precursor [Pan troglodytes] gi|158514246|sp|A5A6L0|ODPA_PANTR RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor gi|146741454|dbj|BAF62383.1| pyruvate dehydrogenase alpha 1 [Pan troglodytes verus] Length = 390 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 181/370 (48%), Positives = 238/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVG----DIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G L S + AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLSGASQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 124 TFTRGLSVREILAELTGRKGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 181 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 182 KYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 241 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMS P Sbjct: 242 YYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSGPGV 299 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 Query: 354 DPAELYSDIL 363 EL I Sbjct: 360 PLEELGYHIY 369 >gi|294498642|ref|YP_003562342.1| acetoin dehydrogenase E1 component subunit alpha [Bacillus megaterium QM B1551] gi|294348579|gb|ADE68908.1| acetoin dehydrogenase E1 component, alpha subunit [Bacillus megaterium QM B1551] Length = 330 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 123/322 (38%), Positives = 185/322 (57%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + + KE+ Y+ M+ IR+FE++ Q++ G++ GF HL G+EAV VGM L + Sbjct: 7 KTEKLTKEKASWMYQKMVEIRKFEDEVHQIFAKGVLPGFVHLYAGEEAVAVGMCAHLNDS 66 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HGH +A G D +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 67 DSITSTHRGHGHCIAKGGDLDGMMAELFGKVTGLGKGKGGSMHIADLDKGILGANGIVGG 126 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 L G A KY+++ + V FGDGA N+G +E N+AA+W L V++V ENN Y Sbjct: 127 GFPLACGSALTAKYKKTKDVSVCFFGDGAGNEGTFHEGINLAAIWKLPVVFVAENNGYGE 186 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T S AS+ + + R S+NIPG++VDG D+ AV +A+ R +GP +IE +TY Sbjct: 187 ATPFSYASSCSAIADRAASYNIPGVRVDGKDVMAVYEAAAEAIQRARRGEGPTLIECVTY 246 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R GH D Y++ E E D I + LL + +E +L++I+ V K + Sbjct: 247 RNYGHFEGDAQTYKSGNEKKEHLQEKDAIALFKNYLLSEQVVTEQELRDIDGEVEKAVKR 306 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 +VE A++ PD +EL +D+ + Sbjct: 307 AVELAETSDYPDASELLTDVYV 328 >gi|170076981|ref|YP_001733619.1| pyruvate dehydrogenase E1 component, alpha chain [Synechococcus sp. PCC 7002] gi|169884650|gb|ACA98363.1| pyruvate dehydrogenase E1 component, alpha chain [Synechococcus sp. PCC 7002] Length = 343 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 140/326 (42%), Positives = 206/326 (63%), Gaps = 9/326 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQ 104 E KE+ L Y M L R FE+K ++Y G + GF HL GQEAV G+ S+ +G D Sbjct: 16 EITKEEALMLYEDMTLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIRSMRQGEDF 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + YR+H H L+ GV A ++MAEL G++ G SKG+GGSMHMFS ++G GG+ +G + Sbjct: 76 VCSTYRDHVHALSAGVPAREVMAELFGKETGCSKGRGGSMHMFSKEHGLLGGYAFIGEGI 135 Query: 165 SLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + G A +KYR+ D + FGDG +N GQ +E+ N+AALW L +++V+EN Sbjct: 136 PVAAGAALQSKYRQEVMGNKNADNVTACFFGDGTSNNGQFFETLNMAALWKLPILFVVEN 195 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G + RA++Q K+ F +PG +VDGMD+ A++ KAVA RA +GP +I Sbjct: 196 NKWAIGMAHERATSQPEIYKKASVFGMPGYEVDGMDVLAMRDVAQKAVARARAGEGPTLI 255 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP R+ EE E + DPI++ K + + A+ +LK IE ++ Sbjct: 256 EALTYRFRGHSLADPDELRSAEE-KEFWAQRDPIKRFEKFVTNRGLATAEELKAIEKKIQ 314 Query: 338 KIINNSVEFAQSDKEPDPAELYSDIL 363 +++N SV FA+S EP+PAEL I Sbjct: 315 EVVNESVTFAESSPEPNPAELRKYIF 340 >gi|215261326|pdb|3EXE|A Chain A, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261328|pdb|3EXE|C Chain C, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261330|pdb|3EXE|E Chain E, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261332|pdb|3EXE|G Chain G, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex Length = 382 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 177/347 (51%), Positives = 233/347 (67%), Gaps = 7/347 (2%) Query: 20 SVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 S AT + D+ LE G V+ +E L YR+M +RR E KA QLY + Sbjct: 19 SHMFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKI 78 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 + GFCHLC GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG + Sbjct: 79 IRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCA 138 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHM+ FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ+ Sbjct: 139 KGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQI 196 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 +E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG IPG++VDGMDI V Sbjct: 197 FEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCV 254 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRK 316 + A AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ Sbjct: 255 REATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKD 314 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R++++ AS +LKEI++ VRK I ++ +FA +D EP EL I Sbjct: 315 RMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIY 361 >gi|320160830|ref|YP_004174054.1| putative pyruvate dehydrogenase E1 component alpha subunit [Anaerolinea thermophila UNI-1] gi|319994683|dbj|BAJ63454.1| putative pyruvate dehydrogenase E1 component alpha subunit [Anaerolinea thermophila UNI-1] Length = 319 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 135/316 (42%), Positives = 204/316 (64%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K++ YR M++IRR EE++ +LY G +GGF HL IGQEAV G+ + D++ITA Sbjct: 3 KDEYFRMYREMVVIRRLEERSAELYQQGKIGGFLHLYIGQEAVSTGLISARKPQDRVITA 62 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HG + CG+ A ++MAEL G+ G SKGKGGSMH+ F+GGH IVGA + + T Sbjct: 63 YRDHGVAINCGLSAREVMAELLGKATGCSKGKGGSMHLADVTKNFWGGHAIVGAHLPIAT 122 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A + Y+ + + FGDGA N G +E+ N++ +WNL V++V ENNQY MGT+V R Sbjct: 123 GLALGDAYKGEKNVTICMFGDGATNIGFFHEALNMSKIWNLPVLWVCENNQYGMGTAVER 182 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ASA + ++ ++ +P +VDGMD+ A++ ++ + R GP+++E +TYR+RGHS Sbjct: 183 ASAVSEIIQKAQAYAMPSRRVDGMDVMAMRQAAEEMIEAIRNGAGPMLMEAMTYRFRGHS 242 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 M DP YR EE++ + N DPI RK L N A+E +L +++ I+ ++V+FA+ Sbjct: 243 MGDPERYRKPEEVHRYQEN-DPIGIFRKYLQENGIATEEELNQLDDEAEAIVEDAVQFAE 301 Query: 349 SDKEPDPAELYSDILI 364 + EP P EL+ I + Sbjct: 302 ASPEPQPHELFEHIYV 317 >gi|255548035|ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus communis] gi|223545554|gb|EEF47058.1| pyruvate dehydrogenase, putative [Ricinus communis] Length = 433 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 134/354 (37%), Positives = 201/354 (56%), Gaps = 8/354 (2%) Query: 17 LNPSVSAKRAA-TSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGM 75 LN S +R+A + + V L+ KE+ L Y M+L R FE+ Q+Y Sbjct: 53 LNHVSSFRRSAIVAVSEAVKEKKLKSTSNLLITKEEGLVLYEDMVLGRAFEDMCAQMYYR 112 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 G + GF HL GQEAV G L + D +++ YR+H H L+ GV A +M+EL G+ G Sbjct: 113 GKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAVMSELFGKTTG 172 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS------DKICVVCFGD 189 +G+GGSMHMFS + GG +G + + TG AF +KYRR D + + FGD Sbjct: 173 CCRGQGGSMHMFSKDHNVLGGFAFIGEGIPVATGAAFTSKYRREVLKEDCDHVTLAFFGD 232 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 G N GQ +E N+AALW L +++V+ENN +A+G S RA++ K+G +F +PG+ V Sbjct: 233 GTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIWKKGPAFGMPGVHV 292 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHD 309 DGMD+ V+ +A+ R +GP ++E TYR+RGHS++DP R E + D Sbjct: 293 DGMDVLKVREVAKEAIGRARRGEGPTLVECETYRFRGHSLADPDELRDPAEKAHY-AARD 351 Query: 310 PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 PI ++K ++ N ASE +LK IE + +++ +SVEFA P ++L ++ Sbjct: 352 PITSLKKYIIENSLASEAELKAIEKKIDEVVEDSVEFADESPVPPRSQLLENVF 405 >gi|172035208|ref|YP_001801709.1| pyruvate dehydrogenase E1 component alpha subunit [Cyanothece sp. ATCC 51142] gi|171696662|gb|ACB49643.1| pyruvate dehydrogenase E1 component alpha subunit [Cyanothece sp. ATCC 51142] Length = 343 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 136/326 (41%), Positives = 209/326 (64%), Gaps = 9/326 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQ 104 + +E+ L Y M L R FE+K ++Y G + GF HL GQEAV G+ +L D Sbjct: 16 QLTQEEGLMLYEDMTLGRLFEDKCAEMYYRGRMFGFVHLYNGQEAVSTGIIKALRPDEDY 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + YR+H H L+CGV ++MAEL G++ G SKG+GGSMH+FS K+ GG+ V + Sbjct: 76 VSSTYRDHVHALSCGVPPREVMAELFGKETGCSKGRGGSMHLFSEKHRLLGGYAFVAEGI 135 Query: 165 SLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + TG AF +KYRR D++ V FGDGA+N GQ +E N+AALW L +IYV+EN Sbjct: 136 PVATGAAFQSKYRREMMGDETADQVTVCFFGDGASNNGQFFECLNMAALWKLPIIYVVEN 195 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G + +RA++Q K+ F++ G++VDGMD+ AV+ +A+A RA +GP +I Sbjct: 196 NKWAIGMAHNRATSQPEIYKKASVFDMVGVEVDGMDVLAVRKVAQEAIARARAGEGPTLI 255 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP R+ +E + + DPI+++ L+ + A++ +L EI+ V+ Sbjct: 256 EALTYRFRGHSLADPDELRSPDE-KQFWGSKDPIQRLEAYLIEHNLANQSELDEIKQKVQ 314 Query: 338 KIINNSVEFAQSDKEPDPAELYSDIL 363 ++++V+FA+ EPDP ELY + Sbjct: 315 ASVDDAVKFAEESPEPDPKELYRYVF 340 >gi|330752149|emb|CBL87109.1| pyruvate dehydrogenase E1 component, alpha subunit [uncultured Flavobacteria bacterium] Length = 331 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 144/320 (45%), Positives = 201/320 (62%), Gaps = 1/320 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + KE L Y MLL R+FE+ + LY + GF HL GQEAV+ G +++ GD+ Sbjct: 4 KKLTKEVYLKWYEDMLLWRKFEDMSAGLYIQQKIRGFLHLYNGQEAVLAGSILAMNPGDK 63 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 MITAYR H + GVD KIMAEL G+ G S+GKGGSMHMFS ++ FYGGHGIVG Q+ Sbjct: 64 MITAYRNHVQPIGLGVDPRKIMAELMGKVTGTSRGKGGSMHMFSKEHNFYGGHGIVGGQI 123 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AFA+KY+ + + + GDGA QG ++E+FN+A LWNL V+++ ENN YAMGT Sbjct: 124 PLGAGLAFADKYKDDNHVTLTYMGDGAVRQGSLHETFNLAMLWNLPVVFICENNGYAMGT 183 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R + + K G+ + +P VDGMD V A M +A+ R+ GP +E+ TYRY Sbjct: 184 SVERTANHSEIWKLGLGYEMPCSAVDGMDPAVVYAAMQEAIDRARSGGGPTFLEIRTYRY 243 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +GHSMSD YRT+ E+ E DPI V+K + KW+S +L+ + V+ ++ V Sbjct: 244 KGHSMSDAQLYRTKNEVAEY-QKVDPISIVKKMIEKKKWSSPDELEAVNKRVKSLVAECV 302 Query: 345 EFAQSDKEPDPAELYSDILI 364 +F + P+ EL+ D+ + Sbjct: 303 KFGEDSPFPESHELWQDVYV 322 >gi|319939105|ref|ZP_08013469.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus anginosus 1_2_62CV] gi|319812155|gb|EFW08421.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus anginosus 1_2_62CV] Length = 322 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 125/321 (38%), Positives = 186/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEGIRRMDLKIAQLVKKGKVPGMTHFSVGEEAASVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEIMGKYNGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + ++DKI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMHQTDKIVVCFFGDGATNEGIFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSTAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK LL N+ AS+ +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLLANQIASDEELEAIQAEVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|125718000|ref|YP_001035133.1| acetoin dehydrogenase, E1 component, alpha subunit [Streptococcus sanguinis SK36] gi|125497917|gb|ABN44583.1| Acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus sanguinis SK36] Length = 322 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 125/321 (38%), Positives = 188/321 (58%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK LL NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLLENKIASEEELEAIQARVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|325689706|gb|EGD31710.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK115] gi|332360450|gb|EGJ38261.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK355] Length = 322 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 125/321 (38%), Positives = 189/321 (58%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K+ L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKDLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK LL NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLLENKIASEEELEAIQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|298506480|gb|ADI85203.1| pyruvate dehydrogenase complex, E1 protein, alpha subunit [Geobacter sulfurreducens KN400] Length = 325 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 134/318 (42%), Positives = 191/318 (60%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + L + M+L R FEE + Y G + GF HL GQEAV VG +L + D ++ Sbjct: 9 LPDSELLKMHEQMVLSREFEESCAEQYTKGHITGFLHLYSGQEAVAVGATAALRKDDYIL 68 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +AYREH + G + ++MAEL G+ G+ KGKGGSMH+F F GG+ IVG Q + Sbjct: 69 SAYREHAQAIVRGAEPRRVMAELFGKATGMCKGKGGSMHLFDPSLAFMGGYAIVGGQFPI 128 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+AFA+KYR+ +I FGDGA NQG +ES N A LW L V+++ ENN Y +GT+V Sbjct: 129 AVGLAFASKYRKEGRISACFFGDGAVNQGTFHESLNWARLWELPVLFLCENNFYGIGTAV 188 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 SRASA ++ KR ++IP ++VDGMD+ AV + + R H P +IE +TYR+RG Sbjct: 189 SRASALSDIHKRTCGYDIPSVRVDGMDVMAVYEAVKWGAEWVREHSRPYLIEAMTYRFRG 248 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSM+DP YR+ E+ +S DPI RL+ A+E +L + R ++ ++V F Sbjct: 249 HSMADPGKYRSAAEVELWKS-RDPIPNFENRLVEEGIATEAELAAVLEKCRGVVADAVAF 307 Query: 347 AQSDKEPDPAELYSDILI 364 A+ P+ E+YSDI + Sbjct: 308 AEESPWPEDDEVYSDIYV 325 >gi|125547024|gb|EAY92846.1| hypothetical protein OsI_14647 [Oryza sativa Indica Group] Length = 425 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 127/356 (35%), Positives = 194/356 (54%), Gaps = 10/356 (2%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 P + A +S V + S +E+ L Y M+L R FE+ Q+Y G Sbjct: 43 PAPRLRTALAVSSDVLPGNKAAPAAAAHSAVTREEALELYEDMVLGRIFEDMCAQMYYRG 102 Query: 77 MVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGI 136 + GF HL GQEAV G L + D +++ YR+H H L+ GV A +MAEL G+ G Sbjct: 103 KMFGFVHLYNGQEAVSTGFIKLLNQADCVVSTYRDHVHALSKGVPARSVMAELFGKATGC 162 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD---------KICVVCF 187 +G+GGSMHMFS + GG +G + + TG AFA KYR + + F Sbjct: 163 CRGQGGSMHMFSEPHNLLGGFAFIGEGIPVATGAAFAAKYRHEVLKQSSPDGLDVTLAFF 222 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDG N GQ +E N+A LW L +++V+ENN +A+G S RA++ K+G +F +PG+ Sbjct: 223 GDGTCNNGQFFECLNMAQLWKLPIVFVVENNLWAIGMSHLRATSDPEIYKKGPAFGMPGV 282 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSN 307 VDGMD+ V+ +A+ R +GP ++E TYR+RGHS++DP R +E + + Sbjct: 283 HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRKPDEKSHY-AA 341 Query: 308 HDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DPI ++K ++ A+E +LK IE + ++ +VEFA + P ++L ++ Sbjct: 342 RDPITALKKYIIEQNLATESELKSIEKKIDDVVEEAVEFADASPLPPRSQLLENVF 397 >gi|322385526|ref|ZP_08059170.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus cristatus ATCC 51100] gi|321270264|gb|EFX53180.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus cristatus ATCC 51100] Length = 322 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 123/321 (38%), Positives = 186/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MATLDKSLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYNGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE++E DPIE +R LL N ASE +L+ I+ +V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVDEW-KKKDPIENLRNYLLENDIASEEELEAIQASVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|307704802|ref|ZP_07641697.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis SK597] gi|307621631|gb|EFO00673.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis SK597] Length = 322 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 124/321 (38%), Positives = 186/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R V++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSVAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|1709449|sp|P52902|ODPA_PEA RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|1263302|gb|AAA97411.1| pyruvate dehydrogenase E1 alpha subunit [Pisum sativum] Length = 397 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 163/356 (45%), Positives = 224/356 (62%), Gaps = 10/356 (2%) Query: 15 MALNPSVSAKRAATSSVDCVDIPFL-----EGFEVSEFNKEQELSAYRLMLLIRRFEEKA 69 LN +S+ AT +++ +PF + + LS +R M L+RR E A Sbjct: 26 FTLNRPISSDTTATLTIETS-LPFTAHNCDPPSRSVTTSPSELLSFFRTMALMRRMEIAA 84 Query: 70 GQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAEL 129 LY ++ GFCHL GQEAV VGM+ T+ D +ITAYR+H L G ++ AEL Sbjct: 85 DSLYKANLIRGFCHLYDGQEAVAVGMEAGTTKKDCIITAYRDHCTFLGRGGTLLRVYAEL 144 Query: 130 TGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGD 189 GR+ G SKGKGGSMH + +GFYGGHGIVGAQV LG G+AF KY + + + +GD Sbjct: 145 MGRRDGCSKGKGGSMHFYKKDSGFYGGHGIVGAQVPLGCGLAFGQKYLKDESVTFALYGD 204 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 GAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ R++ + KRG +PG++V Sbjct: 205 GAANQGQLFEALNISALWDLPAILVCENNHYGMGTATWRSAKSPAYFKRGDY--VPGLKV 262 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNH 308 DGMD AVK A + + GPII+EM TYRY GHSMSDP + YRTR+EI+ +R Sbjct: 263 DGMDALAVKQACKFAKEHALKN-GPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQER 321 Query: 309 DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 DPIE+VRK LL + A+E +LK+ E VRK ++ ++ A+ PDP++L+S++ + Sbjct: 322 DPIERVRKLLLSHDIATEKELKDTEKEVRKEVDEAIAKAKDSPMPDPSDLFSNVYV 377 >gi|253700589|ref|YP_003021778.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Geobacter sp. M21] gi|251775439|gb|ACT18020.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacter sp. M21] Length = 325 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 131/318 (41%), Positives = 190/318 (59%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L Y M+L R FEE + Y G + GF HL GQEAV VG L D ++ Sbjct: 9 LPEEELLKFYEQMVLCREFEESCAEQYSKGHITGFLHLYSGQEAVAVGCSAGLQPADYIL 68 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +AYR+H + G D ++MAEL G+ G+ KGKGGSMH+F+ + F GG+ IVG Q + Sbjct: 69 SAYRDHAQAIVRGADPKRVMAELFGKATGLCKGKGGSMHLFAPELNFMGGYAIVGGQFPI 128 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 TG+A+ ++ + D+I FGDG+ NQG +ES N A LW+L V+++ ENN Y +GT V Sbjct: 129 ATGLAWGSQLQEQDRITACFFGDGSMNQGTFHESLNWARLWDLPVLFICENNFYGIGTEV 188 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASAQ +R ++IP +VDGMD+ A+ +A + R + P IE +TYR+RG Sbjct: 189 HRASAQAALHRRTCGYDIPSEKVDGMDVVAMYQATKRAAEWVRERQRPYFIEAVTYRFRG 248 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR+ E E+ + DPI + +RLL A + L EI+ + +V F Sbjct: 249 HSMSDPAKYRSSSE-AEVWKSRDPIPNLSRRLLEEGIADQARLDEIDRRALAQVQEAVRF 307 Query: 347 AQSDKEPDPAELYSDILI 364 A+ P+ +E+++DI + Sbjct: 308 AEDSPWPEDSEIWNDIYV 325 >gi|115456930|ref|NP_001052065.1| Os04g0119400 [Oryza sativa Japonica Group] gi|38344868|emb|CAE01294.2| OSJNBa0020P07.11 [Oryza sativa Japonica Group] gi|113563636|dbj|BAF13979.1| Os04g0119400 [Oryza sativa Japonica Group] gi|125589167|gb|EAZ29517.1| hypothetical protein OsJ_13591 [Oryza sativa Japonica Group] gi|215697370|dbj|BAG91364.1| unnamed protein product [Oryza sativa Japonica Group] Length = 425 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 127/356 (35%), Positives = 194/356 (54%), Gaps = 10/356 (2%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 P + A +S V + S +E+ L Y M+L R FE+ Q+Y G Sbjct: 43 PAPRLRTALAVSSDVLPGNKAAPAAAAHSAVTREEALELYEDMVLGRIFEDMCAQMYYRG 102 Query: 77 MVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGI 136 + GF HL GQEAV G L + D +++ YR+H H L+ GV A +MAEL G+ G Sbjct: 103 KMFGFVHLYNGQEAVSTGFIKLLNQADCVVSTYRDHVHALSKGVPARSVMAELFGKATGC 162 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD---------KICVVCF 187 +G+GGSMHMFS + GG +G + + TG AFA KYR + + F Sbjct: 163 CRGQGGSMHMFSEPHNLLGGFAFIGEGIPVATGAAFAAKYRHEVLKQSSPDGLDVTLAFF 222 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDG N GQ +E N+A LW L +++V+ENN +A+G S RA++ K+G +F +PG+ Sbjct: 223 GDGTCNNGQFFECLNMAQLWKLPIVFVVENNLWAIGMSHLRATSDPEIYKKGPAFGMPGV 282 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSN 307 VDGMD+ V+ +A+ R +GP ++E TYR+RGHS++DP R +E + + Sbjct: 283 HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRRPDEKSHY-AA 341 Query: 308 HDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DPI ++K ++ A+E +LK IE + ++ +VEFA + P ++L ++ Sbjct: 342 RDPITALKKYIIEQNLATESELKSIEKKIDDVVEEAVEFADASPLPPRSQLLENVF 397 >gi|126654704|ref|ZP_01726238.1| Dehydrogenase, E1 component [Cyanothece sp. CCY0110] gi|126623439|gb|EAZ94143.1| Dehydrogenase, E1 component [Cyanothece sp. CCY0110] Length = 343 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 135/326 (41%), Positives = 208/326 (63%), Gaps = 9/326 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQ 104 + +KE+ L Y M L R FE+K ++Y G + GF HL GQEAV G+ +L D Sbjct: 16 QLSKEEGLMLYEDMTLGRLFEDKCAEMYYRGRMFGFVHLYNGQEAVSTGIIKALRPDEDY 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + YR+H H L+CGV ++MAEL G+Q G SKG+GGSMH+FS ++ GG+ V + Sbjct: 76 VASTYRDHVHALSCGVPPREVMAELFGKQTGCSKGRGGSMHLFSEQHRLLGGYAFVAEGI 135 Query: 165 SLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + TG AF +KYRR D++ FGDGA+N GQ +E N+AALW L +IYV+EN Sbjct: 136 PVATGAAFQSKYRREAMGDDSADQVTACFFGDGASNNGQFFECLNMAALWKLPIIYVVEN 195 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G + +RA++Q K+ F++ G++VDGMD+ AV+ +AVA RA +GP +I Sbjct: 196 NKWAIGMAHNRATSQPEIYKKASVFDMVGVEVDGMDVLAVRKVAQEAVARARAGEGPTLI 255 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP R+ +E + + DPI+++ L+ + ++ +L EI+ V+ Sbjct: 256 EALTYRFRGHSLADPDELRSPDE-KQFWGSKDPIQRLEAYLIEHNLVNQNELDEIKQQVQ 314 Query: 338 KIINNSVEFAQSDKEPDPAELYSDIL 363 ++++V+FA+ EPDP +LY + Sbjct: 315 AKVDDAVKFAEESPEPDPKDLYRYVF 340 >gi|219855343|ref|YP_002472465.1| hypothetical protein CKR_2000 [Clostridium kluyveri NBRC 12016] gi|219569067|dbj|BAH07051.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 336 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 120/314 (38%), Positives = 172/314 (54%), Gaps = 1/314 (0%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 + + Y ML IR FE A + G + GF HL IG+EA+ + +LT+ D + + + Sbjct: 16 DTLIDIYDKMLKIRAFENMAKDNFAEGKIPGFVHLYIGEEAIASAVCENLTDADYITSTH 75 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R HGHI+A G + + AEL GR G KGKGGSMH+ G G +GIVGA + G Sbjct: 76 RGHGHIIAKGGELKYMAAELFGRATGYCKGKGGSMHIADATKGILGANGIVGAGQDIAVG 135 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 + +YR +D++CV FGD + NQG +ES N+++ W L V+YV ENN Y + S R Sbjct: 136 AGMSIQYRGTDQVCVCFFGDASTNQGTFHESLNLSSAWKLPVVYVCENNGYGISVSQKRH 195 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + R ++ IPG+ VDG D V AV RA KGP +IE TYR RGH Sbjct: 196 QNINDIADRAKAYGIPGVVVDGNDPVEVYEASKTAVERARAGKGPTLIECKTYRQRGHFE 255 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D A Y+ +EE DPI + + LL NK + LK ++ +V I +V+FA + Sbjct: 256 GDSAPYKLKEEQEGWIKK-DPIPRFERYLLENKILGDDKLKAMKESVDNQIKEAVDFALN 314 Query: 350 DKEPDPAELYSDIL 363 EP+ + ++ D+ Sbjct: 315 SPEPELSSVFEDVY 328 >gi|332361203|gb|EGJ39007.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1056] Length = 322 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 126/321 (39%), Positives = 188/321 (58%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYKGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK LL NK ASE +L+ I+ V+K + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLLENKIASEEELEAIQTGVKKAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|288573245|ref|ZP_06391602.1| Pyruvate dehydrogenase (acetyl-transferring) [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568986|gb|EFC90543.1| Pyruvate dehydrogenase (acetyl-transferring) [Dethiosulfovibrio peptidovorans DSM 11002] Length = 334 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 123/322 (38%), Positives = 193/322 (59%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 V +++++ + YR M+ IR FE+K + G + GF HL IG+E + G+ +LT+ Sbjct: 13 PVKDYDRDLLIELYRKMVSIRLFEQKVEHHFLAGDIPGFVHLYIGEEGIGTGVMANLTKE 72 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HGH +A G D +++MAE+ G++ G KGKGGSMH+ G G +GIVG Sbjct: 73 DYIESTHRGHGHTIAKGADLNRMMAEIFGKKTGYCKGKGGSMHIADFSVGMLGANGIVGG 132 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 +L G A A+K R +I VV FGDGA+N+G +E+ N+AA W L V++V ENN++A Sbjct: 133 GYTLAVGAALASKLREDGRISVVFFGDGASNRGTFHEALNMAAAWKLPVLFVCENNEWAS 192 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T ++ + + R + IPG VDG D+ +V T + V Y R+ GP+++E TY Sbjct: 193 TTPYLTTTSVADIADRAQGYGIPGYMVDGNDVLSVYETSKEVVDYIRSGNGPVLLECKTY 252 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R +GH + DP YRT+EE+ E+ N++PI + +++L S DL + + V I Sbjct: 253 RIKGHFVGDPEKYRTKEEVQEVFDNNNPINRFEEKVLEAGVLSREDLDAVYVEVETAIEE 312 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 +V +A EPDP+EL+ D+ + Sbjct: 313 AVRYALESPEPDPSELFDDLYV 334 >gi|194015832|ref|ZP_03054447.1| pyruvate dehydrogenase E1 component subunit alpha [Bacillus pumilus ATCC 7061] gi|194012187|gb|EDW21754.1| pyruvate dehydrogenase E1 component subunit alpha [Bacillus pumilus ATCC 7061] Length = 324 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 122/318 (38%), Positives = 181/318 (56%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KE+ + Y+ M IR+FE++ L+ G++ GF HL G+EAV VG+ L E D + Sbjct: 5 LTKEKAVWMYQKMQEIRQFEDQVHMLFTKGILPGFVHLYAGEEAVAVGVCAHLNEQDSIT 64 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 65 STHRGHGHCIAKGCDLKGMMAEIYGKATGLCKGKGGSMHIADFDKGMLGANGIVGGGFPL 124 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+ +D + V FGDGA NQG +E N+AA+W L VI++ ENN Y T Sbjct: 125 ACGAALTAKYKNTDNVSVCFFGDGANNQGTFHEGINLAAIWKLPVIFIAENNGYGEATPF 184 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S AS+ + R S+ IPG+QVDG D+ AV ++A+ + +GP +IE +TYR G Sbjct: 185 SYASSCKSIVDRAASYGIPGIQVDGKDVTAVYQAAEQAIERAKNGEGPTLIECMTYRNYG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D Y+T +E E + D I + LL + ++ ++ IE V + I+ +V F Sbjct: 245 HFEGDAQRYKTNQEKTEHQEEKDAITLFKNELLKQQLLTDQEISSIEATVAEAIDQAVRF 304 Query: 347 AQSDKEPDPAELYSDILI 364 ++ + PD EL +D+ + Sbjct: 305 SEESEYPDHTELLTDVYV 322 >gi|332366667|gb|EGJ44409.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1059] Length = 357 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 121/349 (34%), Positives = 192/349 (55%), Gaps = 2/349 (0%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEG--FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 L +S R ++ + VD+ + EV + +KE+ + Y+ M IR FEE + + Sbjct: 7 LPQQLSKTRNQSAVSELVDLKVYDATEVEVEQVSKEKAKTMYKTMWDIRNFEENTRRFFA 66 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G + GF HL G+EA+ G+ +LT+ D + + +R HGH +A G D +MAE+ G++ Sbjct: 67 AGQIPGFVHLYAGEEAIATGVCANLTDQDYITSTHRGHGHCVAKGGDLKGMMAEIFGKET 126 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ KGKGGSMH+ G G +G+VG L TG A NKY ++D + V FGDGAAN+ Sbjct: 127 GLGKGKGGSMHIADLDKGILGANGMVGGGFGLATGAAMRNKYLKTDSVAVCFFGDGAANE 186 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G +E N+A++W L VI+V ENN +A T +SA ++R ++N+PG++V+G D+ Sbjct: 187 GNFHECLNMASIWKLPVIFVNENNLFAESTPQWYSSASGTIAERAAAYNMPGVRVNGKDL 246 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV +AV R+ +GP +IE +TYR GH D Y+ E + ++ D ++ Sbjct: 247 FAVYQVAKEAVERARSGEGPTLIEAVTYRDHGHFEGDEQKYKALEGEEKDWADVDALDVF 306 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + + +E +L I RK + +++FAQ P L D+ Sbjct: 307 HDYAIEHGLLTEEELDAILEESRKDVEEAIKFAQDSPIPRSESLLEDVF 355 >gi|28465345|dbj|BAC57469.1| pyruvate dehydrogenase E1 alpha subunit [Beta vulgaris] Length = 395 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 158/320 (49%), Positives = 214/320 (66%), Gaps = 4/320 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + + ++ +R M L+RR E + LY ++ GFCHL GQEAV VGM+ ++T+ D + Sbjct: 59 DTTPAELMTYFRDMALMRRMEIASDSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDNI 118 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H LA G AEL GRQ G S+GKGGSMH + +GFYGGHGIVGAQV Sbjct: 119 ITAYRDHCIYLARGGSLLSAFAELVGRQDGCSRGKGGSMHFYKKDSGFYGGHGIVGAQVP 178 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA KY + D + +GDGAANQGQ++E+ N+AALW+L I V ENN Y MGT+ Sbjct: 179 LGVGLAFAQKYNKEDCVSFALYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTA 238 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RA+ ++ KRG +PG++VDGMD+ AVK A Y + GPII+EM TYRY Sbjct: 239 EWRAAKSPSYYKRGDY--VPGLKVDGMDVLAVKQACKSAKEYVLKN-GPIILEMDTYRYH 295 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP + YRTR+EI+ +R DPIE+VRK LL + A E +LK+IE +RK ++ ++ Sbjct: 296 GHSMSDPGSTYRTRDEISGIRQERDPIERVRKLLLAHDIAGEKELKDIEKEIRKEVDEAI 355 Query: 345 EFAQSDKEPDPAELYSDILI 364 A+ PD +EL+++I + Sbjct: 356 AKAKESPMPDTSELFTNIYV 375 >gi|118486324|gb|ABK95003.1| unknown [Populus trichocarpa] Length = 442 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 126/324 (38%), Positives = 189/324 (58%), Gaps = 8/324 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KE+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L D ++ Sbjct: 92 ITKEEGLEVYEDMILGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKREDSVV 151 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A +M+EL G+ G +G+GGSMHMFS ++ GG +G + + Sbjct: 152 STYRDHVHALSKGVPARAVMSELFGKTTGCCRGQGGSMHMFSKEHNLIGGFAFIGEGIPV 211 Query: 167 GTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG AF++KYRR D + + FGDG N GQ +E N+AALW L +++V+ENN Sbjct: 212 ATGAAFSSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL 271 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G S RA++ K+G +F +PG+ VDGMD+ V+ +A+ R +GP ++E Sbjct: 272 WAIGMSHVRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPTLVEC 331 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR+RGHS++DP R E + DPI ++K ++ N ASE +LK IE + ++ Sbjct: 332 ETYRFRGHSLADPDELRDPAEKARY-AARDPIAALKKYMIENSLASEAELKAIEKKIDEV 390 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 + +VEFA P ++L ++ Sbjct: 391 VEEAVEFADESPHPSRSQLLENVF 414 >gi|153954889|ref|YP_001395654.1| PdhA [Clostridium kluyveri DSM 555] gi|146347747|gb|EDK34283.1| PdhA [Clostridium kluyveri DSM 555] Length = 333 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 120/314 (38%), Positives = 172/314 (54%), Gaps = 1/314 (0%) Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 + + Y ML IR FE A + G + GF HL IG+EA+ + +LT+ D + + + Sbjct: 13 DTLIDIYDKMLKIRAFENMAKDNFAEGKIPGFVHLYIGEEAIASAVCENLTDADYITSTH 72 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R HGHI+A G + + AEL GR G KGKGGSMH+ G G +GIVGA + G Sbjct: 73 RGHGHIIAKGGELKYMAAELFGRATGYCKGKGGSMHIADATKGILGANGIVGAGQDIAVG 132 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 + +YR +D++CV FGD + NQG +ES N+++ W L V+YV ENN Y + S R Sbjct: 133 AGMSIQYRGTDQVCVCFFGDASTNQGTFHESLNLSSAWKLPVVYVCENNGYGISVSQKRH 192 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 + + R ++ IPG+ VDG D V AV RA KGP +IE TYR RGH Sbjct: 193 QNINDIADRAKAYGIPGVVVDGNDPVEVYEASKTAVERARAGKGPTLIECKTYRQRGHFE 252 Query: 290 SDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 D A Y+ +EE DPI + + LL NK + LK ++ +V I +V+FA + Sbjct: 253 GDSAPYKLKEEQEGWIKK-DPIPRFERYLLENKILGDDKLKAMKESVDNQIKEAVDFALN 311 Query: 350 DKEPDPAELYSDIL 363 EP+ + ++ D+ Sbjct: 312 SPEPELSSVFEDVY 325 >gi|324992902|gb|EGC24822.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK405] gi|324994461|gb|EGC26374.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK678] gi|327462208|gb|EGF08535.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1] gi|327474228|gb|EGF19635.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK408] gi|327489695|gb|EGF21486.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1058] Length = 322 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 126/321 (39%), Positives = 188/321 (58%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV Y R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVDYVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK LL NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLLENKIASEEELEAIQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|302784648|ref|XP_002974096.1| hypothetical protein SELMODRAFT_149464 [Selaginella moellendorffii] gi|300158428|gb|EFJ25051.1| hypothetical protein SELMODRAFT_149464 [Selaginella moellendorffii] Length = 435 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 131/324 (40%), Positives = 190/324 (58%), Gaps = 8/324 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L Y M+L R FE+ Q+Y + GF HL GQEAV G SL + D + Sbjct: 85 VTREEGLELYEDMILGRCFEDMCAQMYYRSKMFGFVHLYNGQEAVSTGFIKSLKKDDYIC 144 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++M+EL G+ G +G+GGSMHMFS ++ GG +G + + Sbjct: 145 STYRDHVHALSKGVPARQVMSELFGKATGCCRGQGGSMHMFSKEHRLLGGFAFIGEGIPV 204 Query: 167 GTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG AF KY R D + + FGDG N GQ +E N+AALW L ++YV+ENN Sbjct: 205 ATGAAFNTKYSREVLKDLSVDAVTLAFFGDGTCNNGQFFECLNMAALWKLPIVYVVENNL 264 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G RA++ K+G +F +PG+ VDGMD+ V+ +A+A R GP ++E Sbjct: 265 WAIGMDHFRATSVPEIWKKGEAFGMPGVHVDGMDVLKVREVAKEAIARARRGDGPTLVEC 324 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRYRGHS++DP R E+ N+ + DPI +K LL N ASE DLK IE + +I Sbjct: 325 ETYRYRGHSLADPDELRKPEQKNKY-AVRDPIAAFKKYLLENGLASEADLKTIEKKIDEI 383 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 + ++VEFA + P ++L ++ Sbjct: 384 VEDAVEFADASPLPPRSQLLENVF 407 >gi|50426983|ref|XP_462096.1| DEHA2G12870p [Debaryomyces hansenii CBS767] gi|49657766|emb|CAG90582.1| DEHA2G12870p [Debaryomyces hansenii] Length = 398 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 156/373 (41%), Positives = 226/373 (60%), Gaps = 15/373 (4%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIP--FLEGF--EVSEFN----KEQELS 54 + + +T + A +A+S + + +P EG+ E+ E + K+ L Sbjct: 1 MISRSITHQLARGAGVMGRRTMASASSDLVSIKLPESSFEGYNLEIPELSFETEKDTLLQ 60 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y+ M++IRR E + LY + GFCHL IGQEAV VG++ ++ + D +IT+YR HG Sbjct: 61 MYKDMIIIRRMEMASDALYKAKKIRGFCHLSIGQEAVAVGIEAAINKKDSVITSYRCHGF 120 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G +++ EL G++ G+S GKGGSMHM+ GFYGG+GIVGAQV LG G+AFA+ Sbjct: 121 TYMRGASVKEVLGELMGKRSGVSYGKGGSMHMY--AQGFYGGNGIVGAQVPLGAGLAFAH 178 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KYR +GDGA+NQGQV+ES+N+A LW+L ++ ENN+Y MGTS SR+SA T Sbjct: 179 KYRGEGNCTFNLYGDGASNQGQVFESYNMAKLWDLPCVFACENNKYGMGTSASRSSAMTE 238 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++V+GMDI A A +C + GP+++E TYRY GHSMSDP Sbjct: 239 YYKRGQY--IPGLKVNGMDILACYQASKFAKDWCTSGNGPLVLEYETYRYGGHSMSDPGT 296 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTREE+ MRS +DPI ++ LL A+E ++K + RK ++ V A++D P Sbjct: 297 TYRTREEVQHMRSRNDPIAGLKATLLELDIATEEEIKSYDKAARKYVDEQVAEAEADAPP 356 Query: 354 DP--AELYSDILI 364 + L+ D+ + Sbjct: 357 EAKMDILFEDVYV 369 >gi|224371811|ref|YP_002605975.1| PdhA [Desulfobacterium autotrophicum HRM2] gi|223694528|gb|ACN17811.1| PdhA [Desulfobacterium autotrophicum HRM2] Length = 319 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 118/317 (37%), Positives = 171/317 (53%), Gaps = 1/317 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + EQ + Y M+ IR+FE + + G + GF HL IG+EAV G L D + Sbjct: 3 LSNEQMVGMYTTMVKIRQFETRVQGFFAEGKIPGFVHLYIGEEAVATGACAGLRITDYIT 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH++A G D ++M E+ GR G KGKGGSMH+ G G +GIVG L Sbjct: 63 STHRGHGHLIAKGGDLKQMMGEIFGRTTGYCKGKGGSMHIADIDLGILGANGIVGGGGPL 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A K R+ D + V FGDGA+NQG E+ N+A+ W L V++V ENN Y + Sbjct: 123 ANGAGLAIKARKEDNVAVCFFGDGASNQGTTQEALNLASAWKLPVVFVNENNGYGISCPT 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S++ A T+ + R +++IPG+ VDG ++ V + +AV R+ GP +IE TYR+RG Sbjct: 183 SKSMAVTDIADRAAAYDIPGVVVDGNNVLDVFEAVSEAVKRARSGDGPSLIECKTYRWRG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D YR E+ DPI + +LL + + EI+ V K + +V F Sbjct: 243 HFEGDACVYREPGELERWVEK-DPIPRFENKLLAEGILTPETVAEIKTAVEKELETAVTF 301 Query: 347 AQSDKEPDPAELYSDIL 363 A PDP++L D+ Sbjct: 302 ALDSPLPDPSDLTRDVY 318 >gi|325689733|gb|EGD31737.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK115] Length = 357 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 121/349 (34%), Positives = 192/349 (55%), Gaps = 2/349 (0%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEG--FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 L ++ R+ + + VD+ + EV + +KE+ + Y+ M IR FEE + + Sbjct: 7 LPQRLTKTRSQGAVSELVDLKVHDATEVEVEQISKEKAKTMYKTMWDIRNFEENTRRFFA 66 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 G + GF HL G+EA+ G+ +LT+ D + + +R HGH +A G D +MAE+ G++ Sbjct: 67 AGQIPGFVHLYAGEEAIATGVCANLTDQDYITSTHRGHGHCVAKGGDLKGMMAEIFGKET 126 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ KGKGGSMH+ G G +G+VG L TG A NKY ++D + V FGDGAAN+ Sbjct: 127 GLGKGKGGSMHIADLDKGILGANGMVGGGFGLATGAAMRNKYLKTDSVAVCFFGDGAANE 186 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 G +E N+A++W L VI+V ENN +A T +SA ++R ++N+PG++V+G D+ Sbjct: 187 GNFHECLNMASIWKLPVIFVNENNLFAESTPQWYSSASGTIAERAAAYNMPGVRVNGKDL 246 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQV 314 AV +AV R +GP +IE +TYR GH D Y+ E + ++ D ++ Sbjct: 247 FAVYQVAKEAVERARRGEGPTLIEAVTYRDHGHFEGDEQKYKALEGEEKDWADVDALDIF 306 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R + + +E +L I RK + +++FAQ P L D+ Sbjct: 307 RDYAIEHGLLTEEELDAILEESRKDVEEAIKFAQDSPIPRSESLLEDVF 355 >gi|307706609|ref|ZP_07643416.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis SK321] gi|307618064|gb|EFN97224.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis SK321] Length = 322 Score = 348 bits (894), Expect = 7e-94, Method: Composition-based stats. Identities = 122/321 (38%), Positives = 184/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|297582924|ref|YP_003698704.1| pyruvate dehydrogenase (acetyl-transferring) [Bacillus selenitireducens MLS10] gi|297141381|gb|ADH98138.1| Pyruvate dehydrogenase (acetyl-transferring) [Bacillus selenitireducens MLS10] Length = 333 Score = 348 bits (894), Expect = 7e-94, Method: Composition-based stats. Identities = 121/326 (37%), Positives = 178/326 (54%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 L EV+ E+ Y+ M IR FE++ +L+G G + GF HL G+EAV VG+ Sbjct: 3 LSEKEVTGITTEKARWMYQKMQEIRMFEDRVHELFGQGKLPGFVHLYAGEEAVAVGVCAH 62 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 + D + + +R HGH +A G + +MAEL G+ G+ GKGGSMH+ + G G +G Sbjct: 63 FDDKDTITSTHRGHGHCIAKGCELDGMMAELYGKSTGLCNGKGGSMHIADVEKGMLGANG 122 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG L TG A K +++ + FGDGA N G +E N+AA+W+L V++V ENN Sbjct: 123 IVGGGFPLATGAALTAKLKKTGGVSACFFGDGAGNHGTFHEGINLAAIWDLPVLFVAENN 182 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 YA T AS+ N + R + IPG VDG D+ AV +AV + +GP +IE Sbjct: 183 GYAEATPFEYASSCENIADRAQGYGIPGEIVDGKDVVAVYEAAQRAVERAKRGEGPTLIE 242 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 TYR GH D Y+T E+ + D I + R +L N +E +LK I+ +V + Sbjct: 243 CKTYRNYGHFEGDAQKYKTAEDKERHLNEDDAIRRFRAYILENSLMTEDELKTIDQDVEE 302 Query: 339 IINNSVEFAQSDKEPDPAELYSDILI 364 +N SV FA+ +P +L +D+ + Sbjct: 303 AVNRSVTFAEESPDPTIDDLTTDVYV 328 >gi|168060164|ref|XP_001782068.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666479|gb|EDQ53132.1| predicted protein [Physcomitrella patens subsp. patens] Length = 441 Score = 348 bits (894), Expect = 7e-94, Method: Composition-based stats. Identities = 126/324 (38%), Positives = 190/324 (58%), Gaps = 8/324 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +++ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L +GD + Sbjct: 91 VTRDEGLELYEDMVLGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKGDYVT 150 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++MAEL G+ G +G+GGSMHMFS ++G GG +G + + Sbjct: 151 STYRDHVHALSKGVPARQVMAELFGKTTGCCRGQGGSMHMFSAEHGLLGGFAFIGEGIPV 210 Query: 167 GTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G AF++KY+R + + FGDG AN GQ +E N+A LW L VI+V+ENN Sbjct: 211 AVGAAFSSKYKREVLKEEGDMPVSIAFFGDGTANNGQFFECLNMAQLWKLPVIFVVENNL 270 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G S R+++ K+G +F + VDGMD+ V+ +AV R GP +IE Sbjct: 271 WAIGMSHFRSTSDPEIWKKGPAFGMASAHVDGMDVLKVREVAREAVERARRGDGPTLIEC 330 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR+RGHS++DP R E + DPI ++K LL N+ A+E +LK IE + ++ Sbjct: 331 ETYRFRGHSLADPDELREPAEKAHY-AARDPIVALKKYLLENEIATEAELKTIEKKIDEV 389 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 + ++VEFA + P+ ++L ++ Sbjct: 390 VEDAVEFADASPLPERSQLLENVF 413 >gi|387011|gb|AAA60055.1| pyruvate dehydrogenase E1-alpha precursor [Homo sapiens] Length = 414 Score = 348 bits (894), Expect = 7e-94, Method: Composition-based stats. Identities = 182/370 (49%), Positives = 238/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVG----DIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G L S + AT + D+ LE G V+ +E L Sbjct: 28 MLAAVSRVLSGASQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 87 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 88 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 147 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG GIA A Sbjct: 148 TFTRGLSVREILAELTGRKGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALAC 205 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 206 KYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 265 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP Sbjct: 266 YYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGV 323 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I + +FA +D EP Sbjct: 324 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDPAQFAAADPEP 383 Query: 354 DPAELYSDIL 363 EL I Sbjct: 384 PLEELGYHIY 393 >gi|195447246|ref|XP_002071128.1| GK25306 [Drosophila willistoni] gi|194167213|gb|EDW82114.1| GK25306 [Drosophila willistoni] Length = 474 Score = 348 bits (894), Expect = 7e-94, Method: Composition-based stats. Identities = 159/344 (46%), Positives = 219/344 (63%), Gaps = 12/344 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF EG + + K++ L Y M IRR E AG LY ++ G Sbjct: 109 ATEATIEVNRPFKLHRLDEGPATTVKLTKDEALKYYTQMQTIRRIETAAGNLYKEKIIRG 168 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV + ++AELTG QGG ++GK Sbjct: 169 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPNGVLAELTGVQGGCARGK 228 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+S FYGG+GIVGAQV LG G+ A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 229 GGSMHMYSP--NFYGGNGIVGAQVPLGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEA 286 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 287 YNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 344 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y GP+++E TYRY GHSMSDP YRTREEI E+R DPI ++ + Sbjct: 345 TEFAINYV-NTHGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 403 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + ++K I++ VRK I+ + FA+SD E + L++D+ Sbjct: 404 ELGLITADEVKAIDLKVRKEIDEATAFAKSDAELAVSHLWTDVY 447 >gi|324991154|gb|EGC23088.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK353] gi|325694503|gb|EGD36412.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK150] Length = 322 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 125/321 (38%), Positives = 188/321 (58%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK LL NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLLENKIASEEELEAIQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|331238071|ref|XP_003331691.1| pyruvate dehydrogenase E1 component subunit alpha [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309310681|gb|EFP87272.1| pyruvate dehydrogenase E1 component subunit alpha [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 540 Score = 348 bits (893), Expect = 8e-94, Method: Composition-based stats. Identities = 154/334 (46%), Positives = 210/334 (62%), Gaps = 12/334 (3%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 D P LE E K + + YR M+ +RR E A LY M+ GFCHL IGQEAV V Sbjct: 186 CDAPSLE----LEMTKAELVQMYRWMVTMRRMEMAADALYKQKMIRGFCHLAIGQEAVSV 241 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 GM+ ++ D++ITAYR H + G ++AEL GR+ G+S GKGGSMH+F+ F Sbjct: 242 GMESAIKPDDKVITAYRCHPFAVLRGGTIKGVIAELLGRKDGMSSGKGGSMHIFTP--TF 299 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSD--KICVVCFGDGAANQGQVYESFNIAALWNLNV 211 +GG+GIVGAQV +G GIA A KY D + +GDGA+NQGQV+E+FN+A LWNL Sbjct: 300 FGGNGIVGAQVPVGAGIALAQKYLNQDDKHATFIMYGDGASNQGQVFEAFNMAKLWNLPA 359 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 ++V ENN Y MGTS R+S+ T + RG IPG+Q +GMD+ +V A + + Sbjct: 360 VFVCENNLYGMGTSAERSSSNTKYFTRGD--QIPGLQANGMDVLSVHNACKYAKEWTTSG 417 Query: 272 KGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 KGP+++E +TYRY GHSMSDP YR+REEI MRS +DPI +R RLL E +LK Sbjct: 418 KGPLLLEFITYRYGGHSMSDPGTTYRSREEIQHMRSTNDPITGLRNRLLEWNVIEEAELK 477 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDPA-ELYSDIL 363 I+ + ++ +VE A+ EP+P ++++DI Sbjct: 478 AIDKQAKAEVDVAVEEAKKSPEPNPETDMWTDIY 511 >gi|149025517|ref|ZP_01836450.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP23-BS72] gi|147929389|gb|EDK80386.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP23-BS72] gi|332076284|gb|EGI86750.1| dehydrogenase E1 component family protein [Streptococcus pneumoniae GA41301] Length = 322 Score = 348 bits (893), Expect = 8e-94, Method: Composition-based stats. Identities = 122/321 (38%), Positives = 184/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFQKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|149242791|pdb|2OZL|A Chain A, Human Pyruvate Dehydrogenase S264e Variant gi|149242793|pdb|2OZL|C Chain C, Human Pyruvate Dehydrogenase S264e Variant Length = 365 Score = 348 bits (893), Expect = 9e-94, Method: Composition-based stats. Identities = 176/345 (51%), Positives = 232/345 (67%), Gaps = 7/345 (2%) Query: 22 SAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 S AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ Sbjct: 4 SFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIR 63 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHLC GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KG Sbjct: 64 GFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKG 123 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHM+ FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E Sbjct: 124 KGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFE 181 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 ++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG IPG++VDGMDI V+ Sbjct: 182 AYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVRE 239 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRL 318 A AYCR+ KGPI++E+ TYRY GH MSDP +YRTREEI E+RS DPI ++ R+ Sbjct: 240 ATRFAAAYCRSGKGPILMELQTYRYHGHEMSDPGVSYRTREEIQEVRSKSDPIMLLKDRM 299 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +++ AS +LKEI++ VRK I ++ +FA +D EP EL I Sbjct: 300 VNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIY 344 >gi|293365474|ref|ZP_06612183.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus oralis ATCC 35037] gi|307703430|ref|ZP_07640372.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus oralis ATCC 35037] gi|322375260|ref|ZP_08049773.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. C300] gi|291315842|gb|EFE56286.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus oralis ATCC 35037] gi|307622837|gb|EFO01832.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus oralis ATCC 35037] gi|321279523|gb|EFX56563.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. C300] Length = 322 Score = 348 bits (893), Expect = 9e-94, Method: Composition-based stats. Identities = 122/321 (38%), Positives = 183/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++W L VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQHTGKIVVCFFGDGATNEGVFHEAVNMASIWKLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|17230200|ref|NP_486748.1| pyruvate dehydrogenase E1 component, alpha subunit [Nostoc sp. PCC 7120] gi|75910474|ref|YP_324770.1| dehydrogenase, E1 component [Anabaena variabilis ATCC 29413] gi|17131801|dbj|BAB74407.1| pyruvate dehydrogenase E1 component, alpha subunit [Nostoc sp. PCC 7120] gi|75704199|gb|ABA23875.1| Dehydrogenase, E1 component [Anabaena variabilis ATCC 29413] Length = 344 Score = 348 bits (893), Expect = 9e-94, Method: Composition-based stats. Identities = 142/327 (43%), Positives = 210/327 (64%), Gaps = 9/327 (2%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-D 103 ++ KE+ L Y M L R FE+K ++Y G + GF HL GQEAV G+ ++ G D Sbjct: 15 AKITKEEGLLLYEDMTLGRFFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIQAMRPGED 74 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS ++G GG+ V Sbjct: 75 FVSSTYRDHVHALSAGVPAREVMAELFGKATGCSKGRGGSMHMFSAEHGLLGGYAFVAEG 134 Query: 164 VSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + + G AF +KYRR D++ FGDGAAN GQ +E+ N+AALW L +I+V+E Sbjct: 135 IPVAAGAAFQSKYRREVLGDPNADQVTACFFGDGAANNGQFFETLNMAALWKLPIIFVVE 194 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN++A+G + RA++ K+ FN+ G++VDGMD+ AV+A +AVA RA +GP + Sbjct: 195 NNKWAIGMAHDRATSDPEIYKKASVFNMVGVEVDGMDVLAVRAVAQEAVARARAGEGPTL 254 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 IE LTYR+RGHS++DP R++ E E + DPI+++ L+ A E +LK IE + Sbjct: 255 IEALTYRFRGHSLADPDEMRSKAE-KEFWFSRDPIKKLAAYLIEQNLADEAELKAIERKI 313 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 + +I+++V+FA+S EPDP+ELY + Sbjct: 314 QDVIDDAVKFAESSPEPDPSELYRFVF 340 >gi|291084744|ref|NP_001166926.1| pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 3 precursor [Homo sapiens] gi|332224048|ref|XP_003261179.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 5 [Nomascus leucogenys] gi|221041292|dbj|BAH12323.1| unnamed protein product [Homo sapiens] Length = 397 Score = 348 bits (893), Expect = 9e-94, Method: Composition-based stats. Identities = 181/377 (48%), Positives = 239/377 (63%), Gaps = 18/377 (4%) Query: 1 MYVAKQDVTVG----DIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G L S + AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLSGASQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLC-------IGQEAVIVGMKMSLTEGDQMIT 107 YR+M +RR E KA QLY ++ GFCHLC + QEA VG++ + D +IT Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQFLLPLTQEACCVGLEAGINPTDHLIT 123 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG G+ +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQV LG Sbjct: 124 AYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMY--AKNFYGGNGIVGAQVPLG 181 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIA A KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MGTSV Sbjct: 182 AGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVE 241 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 RA+A T++ KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GH Sbjct: 242 RAAASTDYYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGH 299 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +F Sbjct: 300 SMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQF 359 Query: 347 AQSDKEPDPAELYSDIL 363 A +D EP EL I Sbjct: 360 ATADPEPPLEELGYHIY 376 >gi|315613183|ref|ZP_07888093.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis ATCC 49296] gi|315314745|gb|EFU62787.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis ATCC 49296] Length = 322 Score = 348 bits (893), Expect = 9e-94, Method: Composition-based stats. Identities = 123/321 (38%), Positives = 184/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQHTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|15901029|ref|NP_345633.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae TIGR4] gi|111658297|ref|ZP_01408987.1| hypothetical protein SpneT_02000526 [Streptococcus pneumoniae TIGR4] gi|148985773|ref|ZP_01818901.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP3-BS71] gi|148989195|ref|ZP_01820585.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP6-BS73] gi|148994513|ref|ZP_01823693.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP9-BS68] gi|149004267|ref|ZP_01829044.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP14-BS69] gi|149013101|ref|ZP_01833947.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP19-BS75] gi|168488993|ref|ZP_02713192.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae SP195] gi|168492501|ref|ZP_02716644.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae CDC0288-04] gi|168577166|ref|ZP_02722981.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae MLV-016] gi|194398360|ref|YP_002037775.1| TPP-dependent acetoin dehydrogenase subunit alpha [Streptococcus pneumoniae G54] gi|225854639|ref|YP_002736151.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae JJA] gi|225856841|ref|YP_002738352.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae P1031] gi|225861104|ref|YP_002742613.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae Taiwan19F-14] gi|237650110|ref|ZP_04524362.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae CCRI 1974] gi|237822312|ref|ZP_04598157.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae CCRI 1974M2] gi|298231004|ref|ZP_06964685.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255428|ref|ZP_06979014.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502833|ref|YP_003724773.1| pyruvate dehydrogenase [Streptococcus pneumoniae TCH8431/19A] gi|14972643|gb|AAK75273.1| putative acetoin dehydrogenase, E1 component, alpha subunit [Streptococcus pneumoniae TIGR4] gi|147757761|gb|EDK64775.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP14-BS69] gi|147763046|gb|EDK69989.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP19-BS75] gi|147922077|gb|EDK73200.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP3-BS71] gi|147925418|gb|EDK76496.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP6-BS73] gi|147927183|gb|EDK78219.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP9-BS68] gi|183572345|gb|EDT92873.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae SP195] gi|183573325|gb|EDT93853.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae CDC0288-04] gi|183577219|gb|EDT97747.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae MLV-016] gi|194358027|gb|ACF56475.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus pneumoniae G54] gi|225723408|gb|ACO19261.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae JJA] gi|225725030|gb|ACO20882.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae P1031] gi|225728304|gb|ACO24155.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae Taiwan19F-14] gi|298238428|gb|ADI69559.1| pyruvate dehydrogenase (acetyl-transferring) [Streptococcus pneumoniae TCH8431/19A] gi|301794265|emb|CBW36686.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus pneumoniae INV104] gi|301800103|emb|CBW32704.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus pneumoniae OXC141] gi|327389293|gb|EGE87638.1| dehydrogenase E1 component family protein [Streptococcus pneumoniae GA04375] gi|332073509|gb|EGI83988.1| dehydrogenase E1 component family protein [Streptococcus pneumoniae GA17570] gi|332200473|gb|EGJ14545.1| dehydrogenase E1 component family protein [Streptococcus pneumoniae GA41317] Length = 322 Score = 348 bits (893), Expect = 9e-94, Method: Composition-based stats. Identities = 122/321 (38%), Positives = 184/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNIEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFQKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|15903095|ref|NP_358645.1| TPP-dependent acetoin dehydrogenase alpha chain [Streptococcus pneumoniae R6] gi|116516204|ref|YP_816502.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus pneumoniae D39] gi|221231877|ref|YP_002511029.1| pyruvate dehydrogenase E1 component,alpha subunit [Streptococcus pneumoniae ATCC 700669] gi|225858951|ref|YP_002740461.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae 70585] gi|15458672|gb|AAK99855.1| TPP-dependent acetoin dehydrogenase alpha chain [Streptococcus pneumoniae R6] gi|116076780|gb|ABJ54500.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus pneumoniae D39] gi|220674337|emb|CAR68883.1| putative pyruvate dehydrogenase E1 component,alpha subunit [Streptococcus pneumoniae ATCC 700669] gi|225720711|gb|ACO16565.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae 70585] Length = 322 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 121/321 (37%), Positives = 184/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNIEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFQKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L++I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASAEELEKIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|332360886|gb|EGJ38692.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK49] Length = 322 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 124/321 (38%), Positives = 189/321 (58%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K+ L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKDLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK LL NK ASE +L+ ++ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLLENKIASEEELEAVQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|68138987|gb|AAY86036.1| pyruvate dehydrogenase [Citrus x paradisi] Length = 395 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 151/320 (47%), Positives = 212/320 (66%), Gaps = 4/320 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E ++ LS +R M +RR E A LY +V GFCHL GQEAV +GM+ +T+ D + Sbjct: 59 ETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSI 118 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H L G ++ +EL GR+ G S GKGGSMH + + YGGHGIVGAQ+ Sbjct: 119 ITAYRDHCTFLGRGGTLLEVFSELMGRKDGCSHGKGGSMHFYKKDSRLYGGHGIVGAQIP 178 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA KY + + + +GDGAANQGQ++E+ NIAALW+L I V ENN Y MGT+ Sbjct: 179 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTA 238 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RA+ ++ KRG +PG++VDGMD AVK A + + GP+I+EM TYRY Sbjct: 239 EWRAAKSPSYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKN-GPMILEMDTYRYH 295 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP + YRTR+EI+ +R DPIE++RK +L + A+E +LK+IE VRK ++ ++ Sbjct: 296 GHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDEAI 355 Query: 345 EFAQSDKEPDPAELYSDILI 364 A+ P+P+EL++++ + Sbjct: 356 AKAKESPMPEPSELFTNVYV 375 >gi|327470036|gb|EGF15500.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK330] Length = 322 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 125/321 (38%), Positives = 187/321 (58%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K+ L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKDLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + ++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMHKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK LL NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLLENKIASEEELEAIQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV FA+ P + DI Sbjct: 300 SVNFAEESPFPPLESAFEDIY 320 >gi|11559813|gb|AAG38097.1|AF299324_1 pyruvate dehydrogenase alpha subunit [Azorhizobium caulinodans] Length = 339 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 202/321 (62%), Positives = 251/321 (78%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V F KEQEL AYR MLLIRRFEEKAGQ+YGMG++GGFCHL IGQEAV+VGM+M++ +GD Sbjct: 17 VPTFTKEQELLAYREMLLIRRFEEKAGQMYGMGLIGGFCHLYIGQEAVVVGMQMAMKQGD 76 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 Q+IT YR+HGH+LA G+++ +MAELTGR+GG SKGKGGSMHMFS + F+GGHGIVG Sbjct: 77 QVITGYRDHGHMLATGMESRGVMAELTGRKGGYSKGKGGSMHMFSIEKQFFGGHGIVGCA 136 Query: 164 VSLGTGIAFANKYRRSDK-ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 G + + V FGDGAANQGQVYESFN+A LW L V+YVIENN+YAM Sbjct: 137 GVAGHRPRLREPLSAENGSVSVTYFGDGAANQGQVYESFNMAELWKLPVVYVIENNKYAM 196 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA-VKATMDKAVAYCRAHKGPIIIEMLT 281 G++VSRASAQT+FSKRG SFNIPG QVDGMD VKA ++A+ + R+ KGP I+EM T Sbjct: 197 GSAVSRASAQTDFSKRGQSFNIPGEQVDGMDSAQPVKAAGERALEFARSGKGPYILEMQT 256 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YRYRGHSMSDPA YR++EE+ +MR+ HDPIEQVR RLL +E +LK+++ +R I+N Sbjct: 257 YRYRGHSMSDPAKYRSKEEVQKMRTEHDPIEQVRNRLLEAGLVTEDELKKVDAEIRDIVN 316 Query: 342 NSVEFAQSDKEPDPAELYSDI 362 ++ +FA D EPDP+ELY+DI Sbjct: 317 DAADFATHDPEPDPSELYTDI 337 >gi|168486434|ref|ZP_02710942.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus pneumoniae CDC1087-00] gi|168493089|ref|ZP_02717232.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus pneumoniae CDC3059-06] gi|183570498|gb|EDT91026.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus pneumoniae CDC1087-00] gi|183576646|gb|EDT97174.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus pneumoniae CDC3059-06] gi|332201636|gb|EGJ15706.1| dehydrogenase E1 component family protein [Streptococcus pneumoniae GA47368] Length = 322 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 121/321 (37%), Positives = 183/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ G ++IE +TY Sbjct: 181 ADIKKMTNIEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFQKAVDHVRSGNGSVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|148910244|gb|ABR18203.1| unknown [Picea sitchensis] Length = 438 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 134/365 (36%), Positives = 203/365 (55%), Gaps = 8/365 (2%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRF 65 ++ + + A P +A +S + +E +E+ L Y M+L R F Sbjct: 47 SNLRFSEFRSAKLPCSPLTVSAIASASELVKERIETKSELLVTREEGLELYEDMILGRSF 106 Query: 66 EEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKI 125 E+ Q+Y G + GF HL GQEAV G L D + + YR+H H L+ GV A + Sbjct: 107 EDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKMLKAHDSVCSTYRDHVHALSKGVPARAV 166 Query: 126 MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS------ 179 M+EL G+ G +G+GGSMHMFS ++G GG +G + + G AF++KY++ Sbjct: 167 MSELFGKTTGCCRGQGGSMHMFSKEHGVLGGFAFIGEGIPVALGAAFSSKYKQEVLKDEK 226 Query: 180 -DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + + V FGDG N GQ +ES N+AALW L +I+V+ENN +A+G S RA++ + ++ Sbjct: 227 ANAVTVAFFGDGTCNNGQFFESLNMAALWKLPIIFVVENNLWAIGMSHIRATSVPDIWEK 286 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 G +F +PG+ VDGMD+ V+ +AVA R GP ++E TYR+RGHS++DP R Sbjct: 287 GPAFGMPGVHVDGMDVLKVREVAKEAVARARRGDGPTLVECETYRFRGHSLADPDELRNP 346 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 E + DPI ++K L+ N A+E DLK IE + +II +VEFA + P +L Sbjct: 347 AEKAHY-AARDPIVSLKKYLIENNLANESDLKSIEKKIDEIIEEAVEFADASPLPQRGQL 405 Query: 359 YSDIL 363 ++ Sbjct: 406 LENVF 410 >gi|331266357|ref|YP_004325987.1| acetoin dehydrogenase, E1 component, alpha subunit, TPP-dependent [Streptococcus oralis Uo5] gi|326683029|emb|CBZ00646.1| acetoin dehydrogenase, E1 component, alpha subunit, TPP-dependent [Streptococcus oralis Uo5] Length = 322 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 123/321 (38%), Positives = 184/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLVENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|167646722|ref|YP_001684385.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Caulobacter sp. K31] gi|167349152|gb|ABZ71887.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Caulobacter sp. K31] Length = 343 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 189/316 (59%), Positives = 243/316 (76%), Gaps = 1/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITA 108 K++ L Y+ MLLIRRFEE+AGQLYGMG++GGFCHL IGQEA+ VGM+ +GDQ+IT Sbjct: 25 KDELLKFYQDMLLIRRFEERAGQLYGMGLIGGFCHLYIGQEAIAVGMQSIKVKGDQIITG 84 Query: 109 YREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGT 168 YR+HGH+LA G+D ++MAELTGR GG S GKGGSMHMF + GFYGGHGIVGAQVSLGT Sbjct: 85 YRDHGHMLAAGMDPREVMAELTGRAGGSSHGKGGSMHMFDVETGFYGGHGIVGAQVSLGT 144 Query: 169 GIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSR 228 G+A N YR + + FGDGAANQGQVYESFN+A LW L V+YVIENNQYAMGTSV R Sbjct: 145 GLALNNHYRGNGNVAFAYFGDGAANQGQVYESFNMAQLWKLPVVYVIENNQYAMGTSVER 204 Query: 229 ASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHS 288 ++++T F KRG SF IPG +VDGMD+ AV +A + R+ +GP I+EM TYRYRGHS Sbjct: 205 SASETAFHKRGTSFRIPGEEVDGMDVTAVAEAGARAAEHARSGQGPFILEMKTYRYRGHS 264 Query: 289 MSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 MSDPA YRT++E++ ++ DPI+ +++RL A E DLK ++ V++I+ + EFA+ Sbjct: 265 MSDPAKYRTKDEVDNVKQTRDPIDHLKERLAKVGVA-EDDLKVVDAEVKRIVAEAAEFAR 323 Query: 349 SDKEPDPAELYSDILI 364 + EPDP+ELY+D+ + Sbjct: 324 TSPEPDPSELYTDVYL 339 >gi|149006176|ref|ZP_01829888.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP18-BS74] gi|182684103|ref|YP_001835850.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae CGSP14] gi|303255762|ref|ZP_07341804.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS455] gi|303260571|ref|ZP_07346537.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP-BS293] gi|303262705|ref|ZP_07348644.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP14-BS292] gi|303265239|ref|ZP_07351150.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS397] gi|303267389|ref|ZP_07353246.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS457] gi|303269257|ref|ZP_07355032.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS458] gi|307127240|ref|YP_003879271.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae 670-6B] gi|147761953|gb|EDK68915.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP18-BS74] gi|182629437|gb|ACB90385.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae CGSP14] gi|301801967|emb|CBW34695.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus pneumoniae INV200] gi|302597274|gb|EFL64378.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS455] gi|302636137|gb|EFL66633.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP14-BS292] gi|302638284|gb|EFL68753.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP-BS293] gi|302641214|gb|EFL71586.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS458] gi|302643086|gb|EFL73376.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS457] gi|302645210|gb|EFL75446.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae BS397] gi|306484302|gb|ADM91171.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae 670-6B] gi|332075097|gb|EGI85568.1| dehydrogenase E1 component family protein [Streptococcus pneumoniae GA17545] Length = 322 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 122/321 (38%), Positives = 184/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNIEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFQKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPSLESAFEDIY 320 >gi|315222968|ref|ZP_07864847.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus anginosus F0211] gi|315187918|gb|EFU21654.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus anginosus F0211] Length = 322 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 123/321 (38%), Positives = 182/321 (56%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAASVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEIMGKYNGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + KI V FGDGA N+G +E+ N+A++W L VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMHHTGKIVVCFFGDGATNEGVFHEAVNMASIWKLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNIEHIHERSAAYGIPGMFIPDGNNVIEVYEGFQKAVKHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK LL N+ AS +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLLANQIASNEELEAIQAEVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|328946309|gb|EGG40453.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1087] Length = 322 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 125/321 (38%), Positives = 187/321 (58%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + ++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMHKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK LL NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLLENKIASEEELEAIQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|195340763|ref|XP_002036982.1| GM12361 [Drosophila sechellia] gi|194131098|gb|EDW53141.1| GM12361 [Drosophila sechellia] Length = 441 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 159/344 (46%), Positives = 218/344 (63%), Gaps = 12/344 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF EG + K+Q L Y M IRR E AG LY ++ G Sbjct: 76 ATEATVQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLETAAGNLYKEKIIRG 135 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV S ++AELTG QGG ++GK Sbjct: 136 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPSGVLAELTGVQGGCARGK 195 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM++ FYGG+GIVGAQV LG G+ A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 196 GGSMHMYAP--NFYGGNGIVGAQVPLGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEA 253 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 254 YNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 311 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y GP+++E TYRY GHSMSDP YRTREEI E+R DPI ++ + Sbjct: 312 TEFAINYV-NTHGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 370 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + ++K I++ VRK ++ + FA+SD E + L++D+ Sbjct: 371 ELGLITTDEVKAIDLKVRKEVDEATAFAKSDAELGVSHLWTDVY 414 >gi|325955110|ref|YP_004238770.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Weeksella virosa DSM 16922] gi|323437728|gb|ADX68192.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Weeksella virosa DSM 16922] Length = 333 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 140/320 (43%), Positives = 197/320 (61%), Gaps = 1/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + KE L Y+ M RRFE+K LY + GF HL GQEA+ G ++ +GD Sbjct: 1 MEKLTKETYLQWYKEMTFWRRFEDKCRSLYLKQKIRGFLHLYNGQEALPAGFLHAMQKGD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 ++ITAYR H +A GVD ++MAEL G+ G SKG GGSMH+FS ++ F+GGHGIVG Q Sbjct: 61 RVITAYRCHIWPMAMGVDPKEVMAELCGKATGTSKGLGGSMHIFSKEHNFFGGHGIVGGQ 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + LG G+AF +KY + + + GDGA QG ++E+FN+A W L V++V ENNQYAMG Sbjct: 121 IPLGAGMAFGDKYNGKNHVTICLMGDGATRQGVLHETFNMAMNWKLPVVFVCENNQYAMG 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV R + + K G+ +++P VDGMD V +A+ R GP +++ TYR Sbjct: 181 TSVKRTANHEDIWKLGLGYDMPSYPVDGMDPVKVAEAAYEAIERARRGDGPTFLDVRTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 YRGHSMSD YRT+EE+ E + DPI V+ LL NKWA++ +L + V+K + Sbjct: 241 YRGHSMSDAEPYRTKEEVEEYKQE-DPILHVQSHLLANKWATQEELDNMVEEVKKEVEAC 299 Query: 344 VEFAQSDKEPDPAELYSDIL 363 V+FA++ P+ +Y I Sbjct: 300 VDFAENSPFPEEDVMYKYIY 319 >gi|322391948|ref|ZP_08065412.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus peroris ATCC 700780] gi|321145174|gb|EFX40571.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus peroris ATCC 700780] Length = 322 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 124/321 (38%), Positives = 187/321 (58%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L + D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNKDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMKNTGKIVVCLFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVQHIHERSAAYGIPGMFIPDGNNVIDVYEGFKKAVDHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE++E + DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVDEWKQK-DPIENLRKYLVENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|215261334|pdb|3EXF|A Chain A, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261336|pdb|3EXF|C Chain C, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261338|pdb|3EXF|E Chain E, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261340|pdb|3EXF|G Chain G, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261342|pdb|3EXG|A Chain A, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261344|pdb|3EXG|C Chain C, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261346|pdb|3EXG|E Chain E, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261348|pdb|3EXG|G Chain G, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261350|pdb|3EXG|I Chain I, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261352|pdb|3EXG|K Chain K, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261354|pdb|3EXG|M Chain M, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261356|pdb|3EXG|O Chain O, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261358|pdb|3EXG|Q Chain Q, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261360|pdb|3EXG|S Chain S, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261362|pdb|3EXG|U Chain U, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261364|pdb|3EXG|W Chain W, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261366|pdb|3EXG|Y Chain Y, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261368|pdb|3EXG|1 Chain 1, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261370|pdb|3EXG|3 Chain 3, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261372|pdb|3EXG|5 Chain 5, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261374|pdb|3EXH|A Chain A, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261378|pdb|3EXH|E Chain E, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex Length = 382 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 176/347 (50%), Positives = 232/347 (66%), Gaps = 7/347 (2%) Query: 20 SVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 S AT + D+ LE G V+ +E L YR+M +RR E KA QLY + Sbjct: 19 SHMFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKI 78 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 + GFCHLC GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG + Sbjct: 79 IRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCA 138 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHM+ FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ+ Sbjct: 139 KGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQI 196 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 +E++N+AALW L I++ ENN+Y MGT+V RA+A T++ KRG IPG++VDGMDI V Sbjct: 197 FEAYNMAALWKLPCIFICENNRYGMGTAVERAAASTDYYKRGDF--IPGLRVDGMDILCV 254 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRK 316 + A AYCR+ KGPI++E+ TYRY GHSMSDP YRTREEI E+RS DPI ++ Sbjct: 255 REATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVAYRTREEIQEVRSKSDPIMLLKD 314 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R++++ AS +LKEI++ VRK I ++ +FA +D EP EL I Sbjct: 315 RMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIY 361 >gi|220906420|ref|YP_002481731.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Cyanothece sp. PCC 7425] gi|219863031|gb|ACL43370.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cyanothece sp. PCC 7425] Length = 342 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 129/325 (39%), Positives = 204/325 (62%), Gaps = 8/325 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++E+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ ++ + D + Sbjct: 17 ISREEGLVLYEDMVLGRYFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGIIKAMRKDDYVC 76 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMH+FS ++ GG V + + Sbjct: 77 STYRDHVHALSVGVPAKEVMAELFGKATGCSKGRGGSMHLFSAEHHLLGGFAFVAEGIPI 136 Query: 167 GTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG AF KYRR D++ FGDGA+N GQ +E N+AALW L +++++ENN+ Sbjct: 137 ATGAAFQTKYRREAMADPTADQVTACFFGDGASNNGQFFECLNMAALWKLPILFIVENNK 196 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G + RA+++ K+ FN+ G++VDGMD+ AV++ +A+ RA +GP +IE Sbjct: 197 WAIGMAHERATSEVEIYKKAEVFNMHGVEVDGMDVMAVRSVAQEAIRRARAGEGPTLIEA 256 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 LTYR+RGHS++DP R++ E + DPI++ L+ A + +LK I+ ++ + Sbjct: 257 LTYRFRGHSLADPDELRSKSEKETWLA-RDPIKKFAAYLVEQNLAQDKELKAIDKKIQAV 315 Query: 340 INNSVEFAQSDKEPDPAELYSDILI 364 I ++V+FA++ EPDP ELY + + Sbjct: 316 IEDAVKFAETSPEPDPKELYRYVFV 340 >gi|325687459|gb|EGD29480.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis SK72] Length = 322 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 126/321 (39%), Positives = 188/321 (58%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKAGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV Y R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVDYVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK LL NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLLENKIASEEELEAIQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|603419|gb|AAB64705.1| Pda1p: alpha subunit of pyruvate dehydrogenase [Saccharomyces cerevisiae] gi|207345769|gb|EDZ72479.1| YER178Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|259146108|emb|CAY79368.1| Pda1p [Saccharomyces cerevisiae EC1118] gi|323333825|gb|EGA75216.1| Pda1p [Saccharomyces cerevisiae AWRI796] gi|323337867|gb|EGA79107.1| Pda1p [Saccharomyces cerevisiae Vin13] gi|323348864|gb|EGA83102.1| Pda1p [Saccharomyces cerevisiae Lalvin QA23] gi|323355352|gb|EGA87177.1| Pda1p [Saccharomyces cerevisiae VL3] Length = 443 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 153/331 (46%), Positives = 217/331 (65%), Gaps = 8/331 (2%) Query: 38 FLEGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 LE ++S E +K L Y+ M++IRR E LY + GFCHL +GQEA+ VG++ Sbjct: 89 MLEPPDLSYETSKATLLQMYKDMVIIRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIE 148 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 ++T+ D +IT+YR HG G ++AEL GR+ G+S GKGGSMH+++ GFYGG Sbjct: 149 NAITKLDSIITSYRCHGFTFMRGASVKAVLAELMGRRAGVSYGKGGSMHLYAP--GFYGG 206 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 +GIVGAQV LG G+AFA++Y+ D +GDGA+NQGQV+ESFN+A LWNL V++ E Sbjct: 207 NGIVGAQVPLGAGLAFAHQYKNEDACSFTLYGDGASNQGQVFESFNMAKLWNLPVVFCCE 266 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN+Y MGT+ SR+SA T + KRG IPG++V+GMDI AV A +C + KGP++ Sbjct: 267 NNKYGMGTAASRSSAMTEYFKRGQY--IPGLKVNGMDILAVYQASKFAKDWCLSGKGPLV 324 Query: 277 IEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +E TYRY GHSMSDP YRTR+EI MRS +DPI ++ L+ A+E ++K + + Sbjct: 325 LEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLIDLGIATEAEVKAYDKS 384 Query: 336 VRKIINNSVEFAQSDKEPD--PAELYSDILI 364 RK ++ VE A + P+ + L+ D+ + Sbjct: 385 ARKYVDEQVELADAAPPPEAKLSILFEDVYV 415 >gi|323351572|ref|ZP_08087226.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis VMC66] gi|322122058|gb|EFX93784.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sanguinis VMC66] Length = 322 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 124/321 (38%), Positives = 188/321 (58%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK L+ NK ASE +L+ I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLVENKIASEEELEAIQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|67924717|ref|ZP_00518122.1| Pyruvate dehydrogenase (lipoamide) [Crocosphaera watsonii WH 8501] gi|67853433|gb|EAM48787.1| Pyruvate dehydrogenase (lipoamide) [Crocosphaera watsonii WH 8501] Length = 343 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 136/326 (41%), Positives = 206/326 (63%), Gaps = 9/326 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQ 104 + K + L Y M L R FE+K ++Y G + GF HL GQEAV G+ +L G D Sbjct: 16 QLTKAEGLMLYEDMTLGRLFEDKCAEMYYRGRMFGFVHLYNGQEAVSTGIIKALRPGEDY 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + YR+H H L+CGV ++MAEL G++ G SKG+GGSMH+FS K+ GG+ V + Sbjct: 76 VSSTYRDHVHALSCGVPPREVMAELFGKETGCSKGRGGSMHLFSEKHRLLGGYAFVAEGI 135 Query: 165 SLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + TG AF +KYRR D++ FGDGA+N GQ +E N+A+LW L +IYV+EN Sbjct: 136 PVATGAAFQSKYRREMMGDDSADQVTACFFGDGASNNGQFFECLNMASLWKLPIIYVVEN 195 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G + RA+++ K+ F++ G++VDGMD+ AV+ +AV RA +GP +I Sbjct: 196 NKWAIGMAHDRATSEPEIYKKASVFDMVGVEVDGMDVLAVRKVAQEAVDRARAGEGPTLI 255 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP R+ +E + N DPI+++ L+ + A++ +L EI+ V+ Sbjct: 256 EALTYRFRGHSLADPDELRSPDE-KQFWGNKDPIQRLEAYLIEHNLANQSELDEIKQKVQ 314 Query: 338 KIINNSVEFAQSDKEPDPAELYSDIL 363 ++++V+FA+ EPDP ELY I Sbjct: 315 ASVDDAVKFAEESPEPDPKELYRYIF 340 >gi|322387861|ref|ZP_08061469.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus infantis ATCC 700779] gi|321141363|gb|EFX36860.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus infantis ATCC 700779] Length = 322 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 127/321 (39%), Positives = 188/321 (58%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + S KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMKNSGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVKHIHERSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE++E + DPIE +RK L+ NK AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVDEWKEK-DPIENLRKYLVENKIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|309800412|ref|ZP_07694575.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus infantis SK1302] gi|308115968|gb|EFO53481.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus infantis SK1302] Length = 322 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 125/321 (38%), Positives = 186/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAASVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMKNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E + DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEWKEK-DPIENLRKYLVANNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|254569568|ref|XP_002491894.1| E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex [Pichia pastoris GS115] gi|238031691|emb|CAY69614.1| E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex [Pichia pastoris GS115] gi|328351607|emb|CCA38006.1| pyruvate dehydrogenase E1 component subunit alpha [Pichia pastoris CBS 7435] Length = 396 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 152/351 (43%), Positives = 218/351 (62%), Gaps = 16/351 (4%) Query: 26 AATSSVDCVDIP--FLEGFEVS-------EFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 +A+ S +D+P E +E+ E KE L Y+ M+++RR E + LY Sbjct: 23 SASPSTVSIDLPASSFETYELEQGPELQFETEKETLLQMYKQMVIVRRMEMASDALYKAK 82 Query: 77 MVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGI 136 + GFCHL +GQEAV VG++ ++T+ D +IT+YR HG G ++ EL G++ G+ Sbjct: 83 KIRGFCHLSVGQEAVAVGIESAITKKDTVITSYRCHGFTYLRGASVKEVQGELMGKRCGV 142 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQ 196 S GKGGSMHMF+T GFYGG+GIVGAQV +G G+AFA++YR +GDGA+NQGQ Sbjct: 143 SYGKGGSMHMFTT--GFYGGNGIVGAQVPVGAGLAFAHQYRNEKNCTFALYGDGASNQGQ 200 Query: 197 VYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRA 256 V+ESFN+A LW+L VI+ ENN+Y MGTS SR+SA T + KRG IPG++V+GMD+ A Sbjct: 201 VFESFNMAKLWDLPVIFACENNKYGMGTSASRSSAMTEYYKRGQF--IPGLKVNGMDVLA 258 Query: 257 VKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVR 315 A + + GP+++E TYRY GHSMSDP YRTREE+ MRS +DPI ++ Sbjct: 259 CYQASKFAKDWTVSGNGPLVMEYETYRYGGHSMSDPGTTYRTREEVQNMRSRNDPIAGLK 318 Query: 316 KRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AELYSDILI 364 L+ ++E +LK + RK ++ + A+ P+ L+ D+ + Sbjct: 319 MHLIELGISTEEELKAYDKEARKYVDKQTKEAELAPPPEAKMDILFEDVYV 369 >gi|328856540|gb|EGG05661.1| hypothetical protein MELLADRAFT_36702 [Melampsora larici-populina 98AG31] Length = 457 Score = 347 bits (891), Expect = 2e-93, Method: Composition-based stats. Identities = 155/334 (46%), Positives = 212/334 (63%), Gaps = 12/334 (3%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 D P LE K + YRLM+ +RR E A LY ++ GFCHL IGQEAV V Sbjct: 87 CDPPSLELP----MTKSALVEMYRLMVTMRRMEMAADALYKQKLIRGFCHLAIGQEAVSV 142 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 GM+ ++ D++ITAYR H + G ++AEL GRQ G+S GKGGSMH+F+ F Sbjct: 143 GMETAIETEDKLITAYRCHPFAVLRGGTIKGVIAELLGRQDGMSSGKGGSMHIFTK--TF 200 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDK--ICVVCFGDGAANQGQVYESFNIAALWNLNV 211 +GG+GIVGAQV +G G+A A KY D + +GDGA+NQGQV+E+FN+A LWNL Sbjct: 201 FGGNGIVGAQVPVGAGLALAQKYLDQDNKYATFIMYGDGASNQGQVFEAFNMAKLWNLPA 260 Query: 212 IYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAH 271 ++V ENN Y MGTS +R+S+ T + RG IPG+QV+GMD+ +V A + A Sbjct: 261 VFVCENNLYGMGTSSARSSSNTKYFTRGD--QIPGLQVNGMDVLSVHNACKYAKEWTTAG 318 Query: 272 KGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 KGP+++E +TYRY GHSMSDP YRTREEI MRS +DPI +R R+L E +LK Sbjct: 319 KGPLLLEFITYRYGGHSMSDPGTTYRTREEIQHMRSTNDPISGLRNRILEAGVVEEAELK 378 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDP-AELYSDIL 363 +I+ + ++ +VE A+ EPDP ++++D+ Sbjct: 379 KIDKAAKIEVDQAVEEAKKSPEPDPTKDMWTDVY 412 >gi|129051|sp|P26268|ODPT_ASCSU RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha type II, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|159677|gb|AAA29377.1| pyruvate dehydrogenase type II alpha subunit [Ascaris suum] Length = 391 Score = 347 bits (891), Expect = 2e-93, Method: Composition-based stats. Identities = 168/357 (47%), Positives = 218/357 (61%), Gaps = 6/357 (1%) Query: 9 TVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS-EFNKEQELSAYRLMLLIRRFEE 67 TVG +A++ +++ A + G +V+ KE L Y M IRR E Sbjct: 8 TVGSSVVAMSARLASTEATFQAKPFKLHKLDSGPDVNMHVTKEDALRYYTQMQTIRRMET 67 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 AG LY V GFCHL GQEA VGMK ++ GD ITAYR HG G +K++ Sbjct: 68 AAGNLYKEKKVRGFCHLYSGQEACAVGMKAAMEPGDAAITAYRCHGWTYLSGSPVAKVLC 127 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 ELTGR G GKGGSMHM+ FYGG+GIVGAQ LGTGIAFA KY++ +C+ F Sbjct: 128 ELTGRITGNVYGKGGSMHMYGE--NFYGGNGIVGAQQPLGTGIAFAMKYKKQKNVCITLF 185 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGA NQGQ+YES N+A LW L V+YV ENN Y MGTS +R+SA T++ RG +PG Sbjct: 186 GDGATNQGQLYESMNMAKLWELPVLYVCENNGYGMGTSAARSSASTDYYTRGDY--VPGF 243 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRS 306 VDGMD+ AV+ + +C A KGP++IEM TYRY GHSMSDP YRTREEI E+R Sbjct: 244 WVDGMDVLAVRQAIRWGKEWCNAGKGPLMIEMATYRYGGHSMSDPGTSYRTREEIQEVRK 303 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DPI + +++ +E +LKE++ +RK ++ +V+ A +DKE L +DI Sbjct: 304 TRDPITGFKDKIVTAGLVTEDELKEVDKEIRKEVDAAVKQAHTDKEAPVEMLLTDIY 360 >gi|239835097|ref|ZP_04683424.1| pyruvate dehydrogenase (acetyl-transferring) [Ochrobactrum intermedium LMG 3301] gi|239821236|gb|EEQ92806.1| pyruvate dehydrogenase (acetyl-transferring) [Ochrobactrum intermedium LMG 3301] Length = 345 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 123/335 (36%), Positives = 189/335 (56%), Gaps = 4/335 (1%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 + D ++P + ++ +Q A M LIRRFEE A + Y G++ G HL IGQ Sbjct: 11 DTGDRHNLP----YAFRTYSPDQLKEALHKMYLIRRFEEGAEESYTRGLIHGTMHLSIGQ 66 Query: 89 EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 EA +G + L + D + + +R HGH +A G D ++ AE G++ G KG+GGSMH+ Sbjct: 67 EASAMGSCLPLNDDDMITSTHRGHGHCIAKGADVKRMFAEFFGKETGYCKGRGGSMHIAD 126 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 G G +GIVG + + G A + K +++ K+ V FGDGA N+G +E+ N+A++W Sbjct: 127 VSKGNLGANGIVGGGIPIAVGAALSAKKQKNGKVVVSFFGDGANNEGAFHEALNMASVWK 186 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L V++V ENN Y M TS R++A N + R ++N+PG+ VDG ++ V + +A Sbjct: 187 LPVVFVCENNGYGMSTSTRRSTAVANVADRASAYNMPGVIVDGNNLSEVAEAVSEATERA 246 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 R GP +IE TYR RGHS SD YRT+EEI +++ DPI L + ++ + Sbjct: 247 RRGDGPTLIENKTYRIRGHSKSDRNRYRTKEEIEHWQNDRDPIAHFEADLKAYGFINDAE 306 Query: 329 LKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++ I V K I ++EFA++ PD L D+ Sbjct: 307 IEAIRAEVEKEIAEAIEFAKNSPAPDLTNLTRDVY 341 >gi|325696504|gb|EGD38394.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK160] Length = 322 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 123/321 (38%), Positives = 189/321 (58%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L + D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNKDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNIEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE++E DPIE +RK LL NK ASE +L+ ++ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVDEW-KKKDPIENLRKYLLENKIASEEELEAVQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|215261382|pdb|3EXI|A Chain A, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex With The Subunit-Binding Domain (Sbd) Of E2p, But Sbd Cannot Be Modeled Into The Electron Density Length = 382 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 176/347 (50%), Positives = 233/347 (67%), Gaps = 7/347 (2%) Query: 20 SVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 S AT + D+ LE G V+ +E L YR+M +RR E KA QLY + Sbjct: 19 SHMFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKI 78 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 + GFCHLC GQEA VG++ + D +ITA+R HG G+ +I+AELTGR+GG + Sbjct: 79 IRGFCHLCDGQEACCVGLEAGINPTDHLITAFRAHGFTFTRGLSVREILAELTGRKGGCA 138 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHM+ FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ+ Sbjct: 139 KGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQI 196 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 +E++N+AALW L I++ ENN+Y MGTSV RA+A T++ KRG IPG++VDGMDI V Sbjct: 197 FEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCV 254 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRK 316 + A AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ Sbjct: 255 REATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKD 314 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R++++ AS +LKEI++ VRK I ++ +FA +D EP EL I Sbjct: 315 RMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIY 361 >gi|156044875|ref|XP_001588993.1| hypothetical protein SS1G_09626 [Sclerotinia sclerotiorum 1980] gi|154694021|gb|EDN93759.1| hypothetical protein SS1G_09626 [Sclerotinia sclerotiorum 1980 UF-70] Length = 409 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 168/373 (45%), Positives = 230/373 (61%), Gaps = 15/373 (4%) Query: 2 YVAKQDVTVGDIKM-ALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELS 54 + K+ VT A +V + ++ D F E +E+ E K++ Sbjct: 23 ALVKRTVTTDAASAHADKDAVPQEEDKPFTLQLSDESF-ETYELDPPSYTMETTKKELKQ 81 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y M+ +RR E A +LY + GFCHL GQEAV VG++ SLT+ D +ITAYR HG Sbjct: 82 MYIDMVSMRRMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHSLTKEDDIITAYRCHGF 141 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 L G I+ EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV +G G+AFA+ Sbjct: 142 ALMRGASVKSIIGELLGRREGIAYGKGGSMHMFTK--GFYGGNGIVGAQVPVGAGLAFAH 199 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY + + V +GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGT+ +R+SA T+ Sbjct: 200 KYNGNKNVSVALYGDGASNQGQVFEAFNMAKLWNLPVLFGCENNKYGMGTAANRSSALTD 259 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++V+GMD AVKA + A Y A GP+++E +TYRY GHSMSDP Sbjct: 260 YYKRGQY--IPGLKVNGMDALAVKAAVKHAKEYANAGNGPLVLEYVTYRYGGHSMSDPGT 317 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTREEI MRS DPI ++++L+ +E +LK I+ R ++ V+ A+ P Sbjct: 318 TYRTREEIQRMRSTQDPIAGLKQKLIEWNVTTEDELKTIDKEARAKVDAEVKEAEEMPFP 377 Query: 354 D--PAELYSDILI 364 D P LY DI + Sbjct: 378 DATPQILYEDIYV 390 >gi|194888391|ref|XP_001976909.1| GG18722 [Drosophila erecta] gi|190648558|gb|EDV45836.1| GG18722 [Drosophila erecta] Length = 440 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 159/344 (46%), Positives = 218/344 (63%), Gaps = 12/344 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF EG + K+Q L Y M IRR E AG LY ++ G Sbjct: 75 ATEATIQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLETAAGNLYKEKIIRG 134 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV S ++AELTG QGG ++GK Sbjct: 135 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPSGVLAELTGVQGGCARGK 194 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM++ FYGG+GIVGAQV LG G+ A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 195 GGSMHMYAP--NFYGGNGIVGAQVPLGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEA 252 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 253 YNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 310 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y GP+++E TYRY GHSMSDP YRTREEI E+R DPI ++ + Sbjct: 311 TEFAINYV-NTHGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 369 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + ++K I++ VRK ++ + FA+SD E + L++D+ Sbjct: 370 ELGLITTDEVKAIDLKVRKEVDEATAFAKSDAELGVSHLWTDVY 413 >gi|221633706|ref|YP_002522932.1| TPP-dependent acetoin dehydrogenase subunit alpha [Thermomicrobium roseum DSM 5159] gi|221157060|gb|ACM06187.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Thermomicrobium roseum DSM 5159] Length = 337 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 136/317 (42%), Positives = 196/317 (61%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 K + L YRLM+LIRRFEE A + Y +G + GF HL IG+EAV VG ++ D ++ Sbjct: 14 LPKSELLEMYRLMVLIRRFEEVAAEQYALGKIAGFLHLYIGEEAVAVGAIRAMDPDDHLV 73 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HG+ LA G+D + MAEL G+ G+ G+GGSMH F+GG+ IV + + Sbjct: 74 THYRDHGYALALGLDPRRCMAELFGKATGLVGGRGGSMHFADASKHFWGGYAIVAGLLPI 133 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+ A+KY ++ V FGDGA N G +E+ N AALW L V+++ ENNQY MGT+V Sbjct: 134 AAGLGLASKYLNQRRVAVAIFGDGATNNGAFHEALNFAALWKLPVLFLCENNQYGMGTAV 193 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ASA ++ +++IP +VDG D+ AV +A+ +CR+ GP +E LTYRYRG Sbjct: 194 QYASAVREMYRKACAYDIPAERVDGQDVLAVYEATKRALEHCRSGNGPYFLEALTYRYRG 253 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSM+DP YR++EE+ E R + DPIE+ R++LL + A+ +L ++ V + + +V F Sbjct: 254 HSMADPETYRSKEEVEEWRRHRDPIERFRQQLLAHNVATPEELAALDQAVEEAVAEAVRF 313 Query: 347 AQSDKEPDPAELYSDIL 363 A EPDP L + Sbjct: 314 ADESPEPDPETLTQYVY 330 >gi|195477042|ref|XP_002100072.1| GE16361 [Drosophila yakuba] gi|194187596|gb|EDX01180.1| GE16361 [Drosophila yakuba] Length = 438 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 159/344 (46%), Positives = 218/344 (63%), Gaps = 12/344 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF EG + K+Q L Y M IRR E AG LY ++ G Sbjct: 73 ATEATVQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLETAAGNLYKEKIIRG 132 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV S ++AELTG QGG ++GK Sbjct: 133 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPSGVLAELTGVQGGCARGK 192 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM++ FYGG+GIVGAQV LG G+ A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 193 GGSMHMYAP--NFYGGNGIVGAQVPLGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEA 250 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 251 YNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 308 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y GP+++E TYRY GHSMSDP YRTREEI E+R DPI ++ + Sbjct: 309 TEFAINYV-NTHGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 367 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + ++K I++ VRK ++ + FA+SD E + L++D+ Sbjct: 368 ELGLITTDEVKAIDLKVRKEVDEATAFAKSDAELGVSHLWTDVY 411 >gi|448580|prf||1917268A pyruvate dehydrogenase:SUBUNIT=alpha Length = 361 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 173/344 (50%), Positives = 230/344 (66%), Gaps = 7/344 (2%) Query: 23 AKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + D+ LE G V+ +E L YR+M +RR E KA QLY ++ G Sbjct: 1 FANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRG 60 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHLC GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KGK Sbjct: 61 FCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGK 120 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+ FYGG+GIVGAQV LG GIA A KY ++C+ +GDGAANQGQ++E+ Sbjct: 121 GGSMHMY--AKNFYGGNGIVGAQVPLGAGIALACKYNGLKEVCLTLYGDGAANQGQIFEA 178 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+AALW L +++ ENN+Y M TSV RA+A T++ KRG IPG++VDGMDI V+ Sbjct: 179 YNMAALWKLPCVFICENNRYGMCTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREA 236 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLL 319 A AYCR+ KGPI++E+ TYRY GHSMSDP +YRTREEI E+RS DPI ++ R++ Sbjct: 237 TRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMV 296 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++ AS +LKEI++ VRK I ++ +FA +D EP EL I Sbjct: 297 NSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIY 340 >gi|56754181|gb|AAW25278.1| SJCHGC01355 protein [Schistosoma japonicum] Length = 392 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 162/345 (46%), Positives = 211/345 (61%), Gaps = 6/345 (1%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 S S+ R S + E +E ++ L + IRR E G LY + Sbjct: 28 SESSARFTLSDYKVFKLDTTPAQE-TECTRDDALKYLETLHCIRRMETALGNLYKEKHIR 86 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL GQEAV VG++ +L GD +ITAYR HG + GV I+AEL G++ G +KG Sbjct: 87 GFCHLYSGQEAVAVGIEAALQPGDTIITAYRCHGFTMTRGVPVHDIVAELAGKKTGCTKG 146 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 GGSMH+++ FYGG+GIVGAQV LG GIA KYR + V +GDGAANQGQV+E Sbjct: 147 VGGSMHLYAKD--FYGGNGIVGAQVPLGVGIALRMKYRGEKSVSVTLYGDGAANQGQVFE 204 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 +FN+A LWNL VI++ ENN+Y MGTSV RASA TN+ RG IPG+ VDGMD+ V+ Sbjct: 205 AFNMAKLWNLPVIFICENNKYGMGTSVDRASANTNYYTRGDY--IPGLWVDGMDVLTVRE 262 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 A +CR+ KGPI++E TYRY GHSMSDP YRTREE+ MR DPI +K + Sbjct: 263 ATRFAADWCRSDKGPILLETETYRYHGHSMSDPGTSYRTREEVQSMRRGRDPIALFQKSI 322 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + N ++ + KEIE VR ++ VE A +D EP ++ +I Sbjct: 323 IDNGLCTQDEAKEIEKRVRTEVDKDVEKALNDSEPPLETMFGNIY 367 >gi|301758976|ref|XP_002915337.1| PREDICTED: LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like [Ailuropoda melanoleuca] Length = 391 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 165/361 (45%), Positives = 224/361 (62%), Gaps = 7/361 (1%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIR 63 V L S ++ A + + LE G V+ +E L YR+M IR Sbjct: 14 SRVARKPASRVLAASCNSSDDAMFEIKKCGLYRLEEGPPVTTVLTREDGLKYYRMMQTIR 73 Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 R E KA Q Y + GFCHLC GQEA VG++ + D +IT+YR HG G+ Sbjct: 74 RMELKADQXYKQKFIRGFCHLCDGQEACCVGLEAGINPTDHVITSYRAHGLCYTRGLSVP 133 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 I+AELTGR+GG +K KGGSMHM+ FYGG+GIVGAQ LG GIA A KY+ + ++C Sbjct: 134 SILAELTGRRGGCAKCKGGSMHMY--AKNFYGGNGIVGAQAPLGAGIALACKYKGNKEVC 191 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + +GDGAANQGQ+ E+FN+AALW L +++ ENN MGT+ RA+A T++ KR Sbjct: 192 LTVYGDGAANQGQIAEAFNMAALWKLPCVFICENNLDGMGTAAERAAASTDYYKR--GHF 249 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEIN 302 IPG++VDGMD+ V+ A YCR+ KGPI++E+ TYRY GHSMSDP +YRTR+EI Sbjct: 250 IPGLRVDGMDVLCVREATKFATDYCRSEKGPIVMELQTYRYHGHSMSDPGISYRTRQEIQ 309 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +RS DPI ++ R++++K A+ + KEI++ VRK I+N+ FA +D EP EL I Sbjct: 310 NVRSKSDPIMLLKDRMVNSKLATIEEFKEIDVEVRKEIDNAAHFAITDPEPPLEELGHHI 369 Query: 363 L 363 Sbjct: 370 Y 370 >gi|323476706|gb|ADX81944.1| dehydrogenase E1 component [Sulfolobus islandicus HVE10/4] Length = 332 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 121/327 (37%), Positives = 184/327 (56%), Gaps = 8/327 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + K + L Y+ MLLIR E A +L+ G + GF HL +G+EAV VG+ +L + D Sbjct: 2 VQDIPKSKLLDMYKKMLLIRYHELTAKELFATGKIPGFVHLYVGEEAVAVGVMSTLRDDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A G+D +++AE+ G++ G+ KGKGGSMH+F G G +GIVG Sbjct: 62 YITSTHRGHGHCIAKGLDVKRMLAEIMGKKTGVCKGKGGSMHIFDYSKGMLGANGIVGGG 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A A K + D+I V GDGA NQG V ES N++A+W L V++++E+N YAM Sbjct: 122 APHAVGAALAFKLKGLDRIAVAFIGDGAMNQGVVLESLNLSAIWKLPVVFIVEDNMYAMS 181 Query: 224 TS-------VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 SA ++ +R + F +P ++VDGMD+ AV +AV R GP + Sbjct: 182 IRSLAPAKLQPSHSAAKSYVERALGFGVPAVEVDGMDVLAVYEVAKEAVDRARKGGGPSL 241 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 + TYR+ GH D YR +EE EM DPI R +L+ N ++ +L +I+ Sbjct: 242 LHCKTYRFFGHFEGDSLVYRDKEE-EEMWKKRDPITLFRDKLVSNNIINQEELDKIDREA 300 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 + I +++FA+ P+ E +D+ Sbjct: 301 KTEIEQALKFAEESPYPEVEEALTDVF 327 >gi|158334526|ref|YP_001515698.1| pyruvate dehydrogenase E1 component subunit alpha [Acaryochloris marina MBIC11017] gi|158304767|gb|ABW26384.1| pyruvate dehydrogenase E1 component, alpha subunit [Acaryochloris marina MBIC11017] Length = 342 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 128/326 (39%), Positives = 201/326 (61%), Gaps = 8/326 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + ++ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ ++ D + Sbjct: 16 KITHDEGLILYEDMVLGRAFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGIAKAMRPDDFI 75 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + YR+H H L+ GV A ++MAEL G++ G SKG+GGSMH+FS+++ GG V + Sbjct: 76 CSTYRDHVHALSAGVPARQVMAELFGKETGCSKGRGGSMHLFSSEHNLIGGFAFVAEGIP 135 Query: 166 LGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + TG+AF ++YRR D + FGDGA+N GQ +E N+A+LW L +++V+ENN Sbjct: 136 VATGVAFQSRYRREAMGDAASDHVTACFFGDGASNNGQFFECLNMASLWKLPILFVVENN 195 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 ++A+G + RAS++T K+ F + G++VDGMD+ AV+ A+A RA +GP +IE Sbjct: 196 KWAIGMAHERASSETEIYKKAKVFGMEGVEVDGMDVLAVREVAQTAIARARAGEGPTLIE 255 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 LTYR+RGHS++DP R+ E E + DPI + + L+ K E +L +I+ ++ Sbjct: 256 ALTYRFRGHSLADPDELRSAAEKEEWLA-RDPITKFKSYLVDQKLVKEQELLDIDRKIQT 314 Query: 339 IINNSVEFAQSDKEPDPAELYSDILI 364 +I +V+FA+ +P P +LY I + Sbjct: 315 LIEEAVQFAEESPDPKPEDLYRYIFV 340 >gi|153011434|ref|YP_001372648.1| pyruvate dehydrogenase (acetyl-transferring) [Ochrobactrum anthropi ATCC 49188] gi|151563322|gb|ABS16819.1| Pyruvate dehydrogenase (acetyl-transferring) [Ochrobactrum anthropi ATCC 49188] Length = 345 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 124/335 (37%), Positives = 190/335 (56%), Gaps = 4/335 (1%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 + D ++P + ++ EQ A M LIRRFEE A + Y G++ G HL IGQ Sbjct: 11 DTGDRHNLP----YAFRTYSPEQLKEALHKMYLIRRFEEGAEESYTRGLIHGTMHLSIGQ 66 Query: 89 EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 EA +G + L + D + + +R HGH +A G D ++ AE G++ G KG+GGSMH+ Sbjct: 67 EASAMGSCLPLNDDDMITSTHRGHGHCIAKGADVKRMFAEFFGKETGYCKGRGGSMHIAD 126 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 G G +GIVG + + G A + K +++ K+ V FGDGA N+G +E+ N+AA+W Sbjct: 127 VSKGNLGANGIVGGGIPIAVGAALSAKKQKNGKVVVSFFGDGANNEGAFHEALNMAAVWK 186 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L V+++ ENN Y M TS R++A N + R ++N+PG+ VDG ++ V +++A Sbjct: 187 LPVVFICENNGYGMSTSTKRSTAVANVADRASAYNMPGVIVDGNNLSEVAEAVNEATERA 246 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGD 328 R GP +IE TYR RGHS SD YRT+EEI + + DPI L + ++ + Sbjct: 247 RRGDGPTLIENKTYRIRGHSKSDRNRYRTKEEIEHWQHDRDPIAHFEADLKAYGFINDAE 306 Query: 329 LKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++ I V K I +++EFA++ PD L D+ Sbjct: 307 IEAIRAEVEKEIADAIEFAKNSPVPDLTNLTRDVY 341 >gi|37521098|ref|NP_924475.1| pyruvate dehydrogenase E1 component alpha [Gloeobacter violaceus PCC 7421] gi|35212094|dbj|BAC89470.1| pyruvate dehydrogenase E1 component alpha [Gloeobacter violaceus PCC 7421] Length = 334 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 130/313 (41%), Positives = 187/313 (59%), Gaps = 1/313 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++ + L YR M+L R FE+ Q+Y G + GF HL GQEAV G+ ++ D + Sbjct: 15 IDRPEALVLYRDMVLGRTFEDTCAQMYYRGKMFGFVHLYNGQEAVSTGVIKAMRPDDYVT 74 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A +MAEL G+ G SKG+GGSMH+FS ++ GG V + + Sbjct: 75 STYRDHVHALSKGVPARSVMAELFGKATGCSKGRGGSMHLFSAEHNLLGGFAFVAEGIPI 134 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 TG F Y+ +D++ FGDGA N GQ +E N+AALWNL V+YV+ENN +++G Sbjct: 135 ATGAGFTAVYKGTDQVSACFFGDGATNNGQFFECLNMAALWNLPVLYVVENNLWSIGMYH 194 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RAS+ K+ +F IPG++VDGMD+ AV+A +A+ RA GP +IE TYR+RG Sbjct: 195 HRASSVIEIYKKADAFGIPGVRVDGMDVLAVRAVAKEAIERARAGGGPTLIECTTYRFRG 254 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS++DP R E R DPI ++ + + AS +LK I+ +R I+++V F Sbjct: 255 HSLADPDELRDPAEKEFWR-KQDPIPRLAAFVREQELASAEELKAIDQEIRAEIDDAVLF 313 Query: 347 AQSDKEPDPAELY 359 A+ EP ELY Sbjct: 314 AEESPEPPIDELY 326 >gi|324518008|gb|ADY46979.1| Pyruvate dehydrogenase E1 component subunit alpha type II [Ascaris suum] Length = 396 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 168/357 (47%), Positives = 218/357 (61%), Gaps = 6/357 (1%) Query: 9 TVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS-EFNKEQELSAYRLMLLIRRFEE 67 TVG +A++ +++ A + G +V+ KE L Y M IRR E Sbjct: 13 TVGSSVVAMSARLASTEATFQAKPFKLHKLDSGPDVNMHVTKEDALRYYTQMQTIRRMET 72 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 AG LY V GFCHL GQEA VGMK ++ GD ITAYR HG G +K++ Sbjct: 73 AAGNLYKEKKVRGFCHLYSGQEACAVGMKAAMEPGDAAITAYRCHGWTYLSGSPVAKVLC 132 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 ELTGR G GKGGSMHM+ FYGG+GIVGAQ LGTGIAFA KY++ +C+ F Sbjct: 133 ELTGRITGNVYGKGGSMHMYGE--NFYGGNGIVGAQQPLGTGIAFAMKYKKQKNVCITLF 190 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGA NQGQ+YES N+A LW L V+YV ENN Y MGTS +R+SA T++ RG +PG Sbjct: 191 GDGATNQGQLYESMNMAKLWELPVLYVCENNGYGMGTSAARSSASTDYYTRGDY--VPGF 248 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRS 306 VDGMD+ AV+ + +C A KGP++IEM TYRY GHSMSDP YRTREEI E+R Sbjct: 249 WVDGMDVLAVRQAIRWGKEWCNAGKGPLMIEMATYRYGGHSMSDPGTSYRTREEIQEVRK 308 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DPI + +++ +E +LKE++ +RK ++ +V+ A +DKE L +DI Sbjct: 309 TRDPITGFKDKIVTAGLVTEDELKEVDKEIRKEVDAAVKQAHTDKEAPVEMLLTDIY 365 >gi|37362644|ref|NP_011105.2| Pda1p [Saccharomyces cerevisiae S288c] gi|730222|sp|P16387|ODPA_YEAST RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; AltName: Full=Pyruvate dehydrogenase complex component E1 alpha; Short=PDHE1-A; Flags: Precursor gi|298059|emb|CAA50657.1| PDA1 [Saccharomyces cerevisiae] gi|151944896|gb|EDN63155.1| pyruvate dehydrogenase alpha subunit (E1 alpha) [Saccharomyces cerevisiae YJM789] gi|190405734|gb|EDV09001.1| pyruvate dehydrogenase alpha subunit [Saccharomyces cerevisiae RM11-1a] gi|256271305|gb|EEU06375.1| Pda1p [Saccharomyces cerevisiae JAY291] gi|285811813|tpg|DAA07841.1| TPA: Pda1p [Saccharomyces cerevisiae S288c] Length = 420 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 153/331 (46%), Positives = 217/331 (65%), Gaps = 8/331 (2%) Query: 38 FLEGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMK 96 LE ++S E +K L Y+ M++IRR E LY + GFCHL +GQEA+ VG++ Sbjct: 66 MLEPPDLSYETSKATLLQMYKDMVIIRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIE 125 Query: 97 MSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGG 156 ++T+ D +IT+YR HG G ++AEL GR+ G+S GKGGSMH+++ GFYGG Sbjct: 126 NAITKLDSIITSYRCHGFTFMRGASVKAVLAELMGRRAGVSYGKGGSMHLYAP--GFYGG 183 Query: 157 HGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 +GIVGAQV LG G+AFA++Y+ D +GDGA+NQGQV+ESFN+A LWNL V++ E Sbjct: 184 NGIVGAQVPLGAGLAFAHQYKNEDACSFTLYGDGASNQGQVFESFNMAKLWNLPVVFCCE 243 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN+Y MGT+ SR+SA T + KRG IPG++V+GMDI AV A +C + KGP++ Sbjct: 244 NNKYGMGTAASRSSAMTEYFKRGQY--IPGLKVNGMDILAVYQASKFAKDWCLSGKGPLV 301 Query: 277 IEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +E TYRY GHSMSDP YRTR+EI MRS +DPI ++ L+ A+E ++K + + Sbjct: 302 LEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLIDLGIATEAEVKAYDKS 361 Query: 336 VRKIINNSVEFAQSDKEPD--PAELYSDILI 364 RK ++ VE A + P+ + L+ D+ + Sbjct: 362 ARKYVDEQVELADAAPPPEAKLSILFEDVYV 392 >gi|319947066|ref|ZP_08021300.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus australis ATCC 700641] gi|319747114|gb|EFV99373.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus australis ATCC 700641] Length = 322 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 123/321 (38%), Positives = 185/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L + D Sbjct: 1 MATLDKSLLLDMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNDDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + ++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMHKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIPDGNNVIDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK LL N+ AS +L +I+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLLENEIASAEELDQIQEEVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|332366893|gb|EGJ44634.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1059] Length = 322 Score = 346 bits (889), Expect = 3e-93, Method: Composition-based stats. Identities = 124/321 (38%), Positives = 188/321 (58%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK LL NK ASE +L+ ++ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLLENKIASEEELEAVQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|198425570|ref|XP_002131120.1| PREDICTED: similar to pyruvate dehydrogenase (lipoamide) alpha 1 [Ciona intestinalis] Length = 385 Score = 346 bits (889), Expect = 3e-93, Method: Composition-based stats. Identities = 167/341 (48%), Positives = 222/341 (65%), Gaps = 8/341 (2%) Query: 27 ATSSVDCVDIPFLEGFEVSE--FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + +D LE +E NK+ +S Y M +IRR E KA QLY ++ GFCHL Sbjct: 28 ATFPIKPIDTHKLENTPATEVQINKDDAISYYTKMQIIRRMELKADQLYKQKIIRGFCHL 87 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 GQEA G++ SLT D +ITAYR HG GV I+AEL GR+ G +KGKGGSM Sbjct: 88 YDGQEACCAGIEASLTPKDDVITAYRAHGWAYIRGVPVCNILAELFGRKLGCAKGKGGSM 147 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+S FYGG+GIVGAQV LG GIAFA+KYR SD + V C+GDGAANQGQ++ESFN++ Sbjct: 148 HMYSK--NFYGGNGIVGAQVPLGAGIAFAHKYRNSDTVTVACYGDGAANQGQIFESFNMS 205 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 LW L I+V ENN+Y MGTSV RASA T++ RG IPG++VDGMD+ AV+ A Sbjct: 206 QLWKLPAIFVCENNRYGMGTSVERASASTDYFTRGDY--IPGLRVDGMDVLAVREATRFA 263 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKW 323 + GPI++E++TYRY GHSMSDP YRTR+E+ E+R N DPI R++++ + Sbjct: 264 KEHAVKE-GPILMELVTYRYHGHSMSDPGTSYRTRDEVKEIRQNLDPIMNFREKIISAGF 322 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 ++ D+ I+ V++ + N A + EPD ++ DI + Sbjct: 323 VTKQDVATIDAEVKQHVENETAKALASTEPDFDQIACDIYV 363 >gi|254414376|ref|ZP_05028143.1| pyruvate dehydrogenase E1 component, alpha subunit [Microcoleus chthonoplastes PCC 7420] gi|196179051|gb|EDX74048.1| pyruvate dehydrogenase E1 component, alpha subunit [Microcoleus chthonoplastes PCC 7420] Length = 343 Score = 346 bits (889), Expect = 3e-93, Method: Composition-based stats. Identities = 135/326 (41%), Positives = 201/326 (61%), Gaps = 9/326 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQ 104 + +++ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ ++ D Sbjct: 16 QITRDEGLLLYEDMVLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIRAMRRDYDY 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + YR+H H L+ GV ++MAEL G+ G SKG+GGSMH+FS + GG V + Sbjct: 76 VCSTYRDHVHALSAGVPPREVMAELFGKATGCSKGRGGSMHLFSEPHHLLGGFAFVAEGI 135 Query: 165 SLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + TG AF +KY R D++ FGDGA N GQ +E N+AALW L +IYV+EN Sbjct: 136 PVATGAAFTSKYHRDGLGDPNADQVTACFFGDGACNNGQFFECLNMAALWKLPIIYVVEN 195 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G + RA++Q K+ F +PG++VDGMD+ AV + +AVA RA +GP +I Sbjct: 196 NKWAIGMAHERATSQPEIYKKASVFGMPGIEVDGMDVLAVHSVAQEAVARARAGEGPTLI 255 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP RT EE + DPI+++ L A E +LK I+ ++ Sbjct: 256 EALTYRFRGHSLADPDELRTSEE-KDFWMTRDPIKKLTAYLTEQNLADEEELKAIDKRIQ 314 Query: 338 KIINNSVEFAQSDKEPDPAELYSDIL 363 +++N++V+FAQ+ EPD +EL+ I Sbjct: 315 EVLNDAVQFAQTSPEPDKSELHRYIF 340 >gi|146415272|ref|XP_001483606.1| hypothetical protein PGUG_04335 [Meyerozyma guilliermondii ATCC 6260] Length = 396 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 218/343 (63%), Gaps = 11/343 (3%) Query: 25 RAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 A++ +D+P LE E KE L Y+ M++IRR E A LY + GFCHL Sbjct: 33 PASSFEGYELDVPLLEF----ETEKETLLQMYKDMVVIRRMEMAADALYKAKKIRGFCHL 88 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 +GQEA+ VG++ ++T+ D +IT+YR HG G ++ EL G++ G+S GKGGSM Sbjct: 89 SVGQEAIAVGIENAITKQDSVITSYRCHGFAYVRGASVKAVLGELMGKRSGVSYGKGGSM 148 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HMF+ GFYGG+GIVGAQV LG G+AFA+KYR +GDGAANQGQV+E++N+A Sbjct: 149 HMFAP--GFYGGNGIVGAQVPLGAGLAFAHKYRGEKNATFDLYGDGAANQGQVFEAYNMA 206 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 LW+L I+ ENN+Y MGTS SR+SA T++ KRG IPG++V+GMD+ A A Sbjct: 207 KLWDLPCIFACENNKYGMGTSASRSSALTDYYKRGQY--IPGLKVNGMDVLACYQASKFA 264 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 + + GP+++E TYRY GHSMSDP YRTREE+ MRS +DPI ++ LL Sbjct: 265 KDWAVSGNGPLVLEYETYRYGGHSMSDPGTTYRTREEVQHMRSRNDPIAGLKATLLDLNV 324 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AELYSDILI 364 ASE ++K + + RK ++ V A++D P+ + L+ DI + Sbjct: 325 ASEDEIKAWDKDARKYVDEQVAEAENDAPPEAKMSILFEDIYV 367 >gi|322419488|ref|YP_004198711.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Geobacter sp. M18] gi|320125875|gb|ADW13435.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacter sp. M18] Length = 325 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 133/318 (41%), Positives = 190/318 (59%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++E+ L Y M+L R FEE + Y G + GF HL GQEAV VG L D ++ Sbjct: 9 LSEEELLRFYEQMVLCREFEESCAEQYSKGHITGFLHLYTGQEAVAVGCTAGLLPKDYVL 68 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +AYR+H + G D +K+MAEL G+ G+ KGKGGSMH+F+ + F GG+ IVG Q + Sbjct: 69 SAYRDHAQAIVRGADPNKVMAELFGKATGLCKGKGGSMHLFAPELNFMGGYAIVGGQFPI 128 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 TG+A+A++ D++ FGDGA NQG +ES N A LW L V+++ ENN Y +GT V Sbjct: 129 ATGLAWASQLLEEDRVTACFFGDGAMNQGTFHESLNWARLWELPVLFICENNFYGIGTEV 188 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASAQ +R ++ P +VDGMD+ A+ +A + R + P IE +TYR+RG Sbjct: 189 HRASAQAALHRRTCGYDTPSEKVDGMDVIAMFQATKRAAEWVRERQRPYFIEAVTYRFRG 248 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR+ E RS DPI + +RLL A++ L+EI+ + ++V F Sbjct: 249 HSMSDPAKYRSSSETEVWRS-RDPIPNLSRRLLEQGIATKEQLEEIDKRCLARVEDAVRF 307 Query: 347 AQSDKEPDPAELYSDILI 364 A P+ +E++ DI + Sbjct: 308 ASESPWPEDSEVWEDIYV 325 >gi|227827160|ref|YP_002828939.1| dehydrogenase E1 component [Sulfolobus islandicus M.14.25] gi|229584337|ref|YP_002842838.1| dehydrogenase E1 component [Sulfolobus islandicus M.16.27] gi|238619314|ref|YP_002914139.1| dehydrogenase E1 component [Sulfolobus islandicus M.16.4] gi|227458955|gb|ACP37641.1| dehydrogenase E1 component [Sulfolobus islandicus M.14.25] gi|228019386|gb|ACP54793.1| dehydrogenase E1 component [Sulfolobus islandicus M.16.27] gi|238380383|gb|ACR41471.1| dehydrogenase E1 component [Sulfolobus islandicus M.16.4] Length = 332 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 121/327 (37%), Positives = 185/327 (56%), Gaps = 8/327 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + K + L Y+ MLLIR E A +L+ +G + GF HL +G+EAV VG+ +L + D Sbjct: 2 VQDIPKSKLLDMYKKMLLIRYHELTAKELFAIGKIPGFVHLYVGEEAVAVGVMSTLRDDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A G+D +++AE+ G++ G+ KGKGGSMH+F G G +GIVG Sbjct: 62 YITSTHRGHGHCIAKGLDVKRMLAEIMGKKTGVCKGKGGSMHIFDYSKGMLGANGIVGGG 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A A K + D++ GDGA NQG V ES N++A+W L V++++E+N YAM Sbjct: 122 APHAVGAALAFKLKGLDRVAAAFIGDGAMNQGVVLESLNLSAIWKLPVVFIVEDNMYAMS 181 Query: 224 TS-------VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 T SA ++ +R + F IP ++VDGMD+ AV +AV R GP + Sbjct: 182 TRSLAPAKLQPSHSAAKSYVERALGFGIPAVEVDGMDVLAVYEVAKEAVDKARKGGGPSL 241 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 + TYR+ GH D YR +EE EM DPI R +L+ N ++ +L +I+ Sbjct: 242 LHCKTYRFFGHFEGDSLVYRDKEE-EEMWRKRDPITLFRDKLVSNNIVNQEELDKIDREA 300 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 + I +++FA+ P+ E +D+ Sbjct: 301 KTEIEQALKFAEESPYPEVEEALTDVF 327 >gi|327460355|gb|EGF06692.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1057] Length = 322 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 124/321 (38%), Positives = 189/321 (58%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L E D Sbjct: 1 MATLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNEDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G++ +++MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LLTSNHRGHGQAIAKGINLNEMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 181 ADIKKMTNVEHIHERSAAYGIPGMFIEDGNNVLDVYEGFQKAVEHVRSGKGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE++E DPIE +RK LL NK ASE +L+ ++ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEVDEW-KKKDPIENLRKYLLENKIASEEELEAVQAGVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|322780442|gb|EFZ09930.1| hypothetical protein SINV_11234 [Solenopsis invicta] Length = 379 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 158/319 (49%), Positives = 215/319 (67%), Gaps = 5/319 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 ++ + ++ + IRR E AG LY +V GFCHL GQEA VGMK ++ D + Sbjct: 37 TVTRDDAIKYFKQLHTIRRMETAAGNLYKEKIVRGFCHLYSGQEACAVGMKAAMRSQDAV 96 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG G+D + AELTGRQGG +KGKGGSMHM+S FYGG+GIVGAQV Sbjct: 97 ITAYRAHGWTYLMGIDVFGVFAELTGRQGGNAKGKGGSMHMYSK--NFYGGNGIVGAQVP 154 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY + +C+ +GDGAANQGQV+E++N+A LW++ I+V ENN Y MGTS Sbjct: 155 LGVGIAFAQKYLNNGGVCLTLYGDGAANQGQVFEAYNMAKLWDVPCIFVCENNGYGMGTS 214 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V RASA T++ RG IPG+ VDGMD+ AV+ A+ +C + KGPI++E +TYRY Sbjct: 215 VDRASASTDYYTRGDY--IPGIWVDGMDVLAVREATRFAIEHCTSGKGPIVMETVTYRYS 272 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YRTREE+ E+R DP+ ++R+L+ + ++K IE +RK +++++ Sbjct: 273 GHSMSDPGTSYRTREEVQEVRQTRDPLTSFKERILNVNLVTAEEIKTIESEIRKSVDDAM 332 Query: 345 EFAQSDKEPDPAELYSDIL 363 + A++DKE EL +DI Sbjct: 333 KAAKNDKEIPLNELTADIY 351 >gi|172108|gb|AAA34847.1| pyruvate dehydrogenase precursor (EC 1.2.4.1) [Saccharomyces cerevisiae] Length = 420 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 155/372 (41%), Positives = 220/372 (59%), Gaps = 17/372 (4%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEG------FEVSEFN----KEQELSA 55 + L + D V I E E + + K L Sbjct: 25 TRIGHVRTMATLKTTDKKAPEDIEGSDTVQIELPESSFESYMLEPPDLSYESSKATLLQM 84 Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M++IRR E LY + GFCHL +GQEA+ VG++ ++T+ D +IT+YR HG Sbjct: 85 YKDMVIIRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIENAITKLDSIITSYRCHGFT 144 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 G ++AEL GR+ G+S GKGGSMH+++ GFYGG+GIVGAQV LG G+AFA++ Sbjct: 145 FMRGASVKAVLAELMGRRAGVSYGKGGSMHLYAP--GFYGGNGIVGAQVPLGAGLAFAHQ 202 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y+ D +GDGA+NQGQV+ESFN+A LWNL V++ ENN+Y MGT+ SR+SA T + Sbjct: 203 YKNEDACSFTLYGDGASNQGQVFESFNMAKLWNLPVVFCCENNKYGMGTAASRSSAMTEY 262 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-AN 294 KRG IPG++V+GMDI AV A +C + KGP+++E TYRY GHSMSDP Sbjct: 263 FKRGQY--IPGLKVNGMDILAVYQASKFAKDWCLSGKGPLVLEYETYRYGGHSMSDPGTT 320 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRTR+EI MRS +DPI ++ L+ A+E ++K + + RK ++ VE A + P+ Sbjct: 321 YRTRDEIQHMRSKNDPIAGLKMHLIDLGIATEAEVKAYDKSARKYVDEQVELADAAPPPE 380 Query: 355 --PAELYSDILI 364 + L+ D+ + Sbjct: 381 AKLSILFEDVYV 392 >gi|190347883|gb|EDK40237.2| hypothetical protein PGUG_04335 [Meyerozyma guilliermondii ATCC 6260] Length = 396 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 156/348 (44%), Positives = 220/348 (63%), Gaps = 15/348 (4%) Query: 28 TSSVDCVDIP--FLEGFEVS------EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 +S + + +P EG+E+ E KE L Y+ M++IRR E A LY + Sbjct: 24 SSDLVSIQLPASSFEGYELDVPSLEFETEKETLLQMYKDMVVIRRMEMAADALYKAKKIR 83 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL +GQEA+ VG++ ++T+ D +IT+YR HG G ++ EL G++ G+S G Sbjct: 84 GFCHLSVGQEAIAVGIENAITKQDSVITSYRCHGFAYVRGASVKAVLGELMGKRSGVSYG 143 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMF+ GFYGG+GIVGAQV LG G+AFA+KYR +GDGAANQGQV+E Sbjct: 144 KGGSMHMFAP--GFYGGNGIVGAQVPLGAGLAFAHKYRGEKNATFDLYGDGAANQGQVFE 201 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 ++N+A LW+L I+ ENN+Y MGTS SR+SA T++ KRG IPG++V+GMD+ A Sbjct: 202 AYNMAKLWDLPCIFACENNKYGMGTSASRSSALTDYYKRGQY--IPGLKVNGMDVLACYQ 259 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRL 318 A + + GP+++E TYRY GHSMSDP YRTREE+ MRS +DPI ++ L Sbjct: 260 ASKFAKDWAVSGNGPLVLEYETYRYGGHSMSDPGTTYRTREEVQHMRSRNDPIAGLKATL 319 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AELYSDILI 364 L ASE ++K + + RK ++ V A++D P+ + L+ DI + Sbjct: 320 LDLNVASEDEIKAWDKDARKYVDEQVAEAENDAPPEAKMSILFEDIYV 367 >gi|148998419|ref|ZP_01825861.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP11-BS70] gi|168483226|ref|ZP_02708178.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae CDC1873-00] gi|307067675|ref|YP_003876641.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component subunit alpha [Streptococcus pneumoniae AP200] gi|147755816|gb|EDK62861.1| acetoin dehydrogenase, E1 component, alpha subunit, putative [Streptococcus pneumoniae SP11-BS70] gi|172043465|gb|EDT51511.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pneumoniae CDC1873-00] gi|306409212|gb|ADM84639.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Streptococcus pneumoniae AP200] Length = 322 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 121/321 (37%), Positives = 183/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++ D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLAFNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFQKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|56752159|ref|YP_172860.1| pyruvate dehydrogenase E1 component subunit alpha [Synechococcus elongatus PCC 6301] gi|81300753|ref|YP_400961.1| pyruvate dehydrogenase (lipoamide) [Synechococcus elongatus PCC 7942] gi|56687118|dbj|BAD80340.1| pyruvate dehydrogenase E1 component alpha subunit [Synechococcus elongatus PCC 6301] gi|81169634|gb|ABB57974.1| Pyruvate dehydrogenase (lipoamide) [Synechococcus elongatus PCC 7942] Length = 342 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 134/326 (41%), Positives = 201/326 (61%), Gaps = 8/326 (2%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ ++E+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ ++ D Sbjct: 15 AQVSREEGLRIYEDMVLGRTFEDKCAEMYYRGKMFGFVHLYNGQEAVASGIIKAMRSDDY 74 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + YR+H H L+ GV A ++MAEL G++ G S+G+GGSMH+FS ++ GG V + Sbjct: 75 VCSTYRDHVHALSAGVPARQVMAELFGKETGCSRGRGGSMHLFSAEHNLLGGFAFVAEGI 134 Query: 165 SLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + TG AF YRR+ D++ FGDGAAN GQ +E N+A LW L +++V+EN Sbjct: 135 PVATGAAFTTAYRRNALGDTSADQVTACFFGDGAANNGQFFECLNMATLWKLPILFVVEN 194 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G S RA++ K+G +F +PG++VDGMD+ AV+A +A+A RA +GP +I Sbjct: 195 NKWAIGMSHERATSDPEIYKKGPAFGMPGVEVDGMDVLAVRAVAQEAIARARAGEGPTLI 254 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP R++EE E DPI++ L A+ +LK I+ + Sbjct: 255 EALTYRFRGHSLADPDELRSKEE-KEFWLARDPIKRFAAHLTEFNLATHEELKAIDKKIE 313 Query: 338 KIINNSVEFAQSDKEPDPAELYSDIL 363 ++ +VEFA S EP P EL I Sbjct: 314 ALVAEAVEFAISSPEPKPEELTRYIW 339 >gi|116317926|emb|CAH65949.1| H0716A07.7 [Oryza sativa Indica Group] Length = 425 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 127/356 (35%), Positives = 194/356 (54%), Gaps = 10/356 (2%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMG 76 P + A +S V + S +E+ L Y M+L R FE+ Q+Y G Sbjct: 43 PAPRLRTALAVSSDVLPGNKAAPTATAHSAVTREEALELYEDMVLGRIFEDMCAQMYYRG 102 Query: 77 MVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGI 136 + GF HL GQEAV G L + D +++ YR+H H L+ GV A +MAEL G+ G Sbjct: 103 KMFGFVHLYNGQEAVSTGFIKLLNQADCVVSTYRDHVHALSKGVPARSVMAELFGKATGC 162 Query: 137 SKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD---------KICVVCF 187 +G+GGSMHMFS + GG +G + + TG AFA KYR + + F Sbjct: 163 CRGQGGSMHMFSEPHNLLGGFAFIGEGIPVATGAAFAAKYRHEVLKQSRPDGLDVTLAFF 222 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDG N GQ +E N+A LW L +++V+ENN +A+G S RA++ K+G +F +PG+ Sbjct: 223 GDGTCNNGQFFECLNMAQLWKLPIVFVVENNLWAIGMSHLRATSDPEIYKKGPAFGMPGV 282 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSN 307 VDGMD+ V+ +A+ R +GP ++E TYR+RGHS++DP R +E + + Sbjct: 283 HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRRPDEKSHY-AA 341 Query: 308 HDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DPI ++K ++ A+E +LK IE + ++ +VEFA + P ++L ++ Sbjct: 342 RDPITALKKYIIEQNLATESELKSIEKKIDDVVEEAVEFADASPLPPRSQLLENVF 397 >gi|261193072|ref|XP_002622942.1| pyruvate dehydrogenase E1 component alpha subunit [Ajellomyces dermatitidis SLH14081] gi|239589077|gb|EEQ71720.1| pyruvate dehydrogenase E1 component alpha subunit [Ajellomyces dermatitidis SLH14081] gi|239613658|gb|EEQ90645.1| pyruvate dehydrogenase E1 component alpha subunit [Ajellomyces dermatitidis ER-3] gi|327352583|gb|EGE81440.1| pyruvate dehydrogenase E1 component alpha subunit [Ajellomyces dermatitidis ATCC 18188] Length = 405 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 163/372 (43%), Positives = 223/372 (59%), Gaps = 20/372 (5%) Query: 5 KQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEF---------NKEQELSA 55 + D A +V A+ +V D E FE E K + Sbjct: 23 VRRTVTTDAASAHAEAVPAEEDKPFTVKLSD----ESFETYELDPPPYTLQTTKRELKQM 78 Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M+ IRR E + +LY + GFCHL GQEAV VG++ ++T+ D++ITAYR HG Sbjct: 79 YHDMVSIRRMEMASDRLYKEKKIRGFCHLSTGQEAVAVGIEHAITKDDKLITAYRCHGFA 138 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G I+ EL GR+ GI+ GKGGSMHMF FYGG+GIVGAQV +G G+AFA + Sbjct: 139 LLRGGTVKSIIGELLGRREGIAYGKGGSMHMF--AKNFYGGNGIVGAQVPVGAGLAFAQQ 196 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y + +GDGA+NQGQV+E+FN+A LWNL I+ ENN+Y MGTS +R+SA T++ Sbjct: 197 YNGEKNTTITLYGDGASNQGQVFEAFNMAKLWNLPCIFGCENNKYGMGTSANRSSALTDY 256 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-AN 294 KRG IPG++++GMD+ A+KA + Y + KGP++ E +TYRY GHSMSDP Sbjct: 257 YKRGQY--IPGLKINGMDVLAIKAAVQYGREYTTSGKGPLVFEYVTYRYGGHSMSDPGTT 314 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRTREEI MRS +DPI ++++LL SE +LK I+ + RK +++ V A+ EPD Sbjct: 315 YRTREEIQRMRSTNDPIAGLKQKLLDWGVTSEEELKAIDKDARKYVDDEVAEAELMAEPD 374 Query: 355 --PAELYSDILI 364 P L+ D + Sbjct: 375 ATPRILFEDTYV 386 >gi|290981818|ref|XP_002673628.1| pyruvate dehydrogenase E1 alpha subunit [Naegleria gruberi] gi|284087213|gb|EFC40884.1| pyruvate dehydrogenase E1 alpha subunit [Naegleria gruberi] Length = 411 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 152/328 (46%), Positives = 208/328 (63%), Gaps = 12/328 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + KE+ ++ YR+M LIRRFE + Q Y + GFCHL GQEA+ VG++ + D + Sbjct: 69 KLTKEELIAMYRMMALIRRFELVSDQQYKARNIRGFCHLYSGQEAICVGIEHATNRADSV 128 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+HG L G MAE GR G SKGKGGSMHM+ F+GG+GIVGAQV Sbjct: 129 ITAYRDHGFQLCRGGSVESTMAEQLGRATGCSKGKGGSMHMYKIDQNFFGGNGIVGAQVP 188 Query: 166 LGTGIAF--------ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 +G G+AF NK + + +GDGAANQGQ+YE+FN+A LW++ VI+V EN Sbjct: 189 VGAGLAFAHSYLDRLNNKQTKDKNVTFALYGDGAANQGQIYEAFNMAKLWHIPVIFVCEN 248 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N+Y MGTS+ R+SA T++ RG IPG+ VDGMDI AV A Y + GPI++ Sbjct: 249 NKYGMGTSMQRSSASTDYYTRGDF--IPGIWVDGMDIIAVYEAARYAKEYSQQF-GPIVL 305 Query: 278 EMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 E TYRY GHSMSDP +YRTR+E+NE+R+ DPI +++ R++ A+E +LKEI+ V Sbjct: 306 EPETYRYYGHSMSDPGISYRTRDEVNEVRNTRDPIARLKARMIEQGIATEDELKEIDNQV 365 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDILI 364 ++ + E A + P EL D+++ Sbjct: 366 KEEVQQGTEKAIAAPLPPLHELVEDVMV 393 >gi|62510808|sp|Q8HXW9|ODPA_MACFA RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; AltName: Full=PDHE1-A type I; Flags: Precursor gi|23574766|dbj|BAC20601.1| pyruvate dehydrogenase E1alpha [Macaca fascicularis] Length = 390 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 179/370 (48%), Positives = 237/370 (64%), Gaps = 11/370 (2%) Query: 1 MYVAKQDVTVG----DIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G L S + AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLSGASQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 YR+M +RR E KA QLY ++ GFCHLC GQEA VG++ + D +ITAYR HG Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G+ +I+AELTGR+GG +KGKGGS HM+ FY G+GIVGAQV LG GIA A Sbjct: 124 TFTRGLSVREILAELTGRKGGCAKGKGGSTHMY--AKNFYRGNGIVGAQVPLGAGIALAC 181 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY D++C+ +GDGAA+QGQ++E++N+AALW L I++ ENN+Y MGTSV RA+A T+ Sbjct: 182 KYNGKDEVCLTLYGDGAADQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTD 241 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYRY GHSMSDP Sbjct: 242 YYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGV 299 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I ++ +FA +D EP Sbjct: 300 SYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 Query: 354 DPAELYSDIL 363 EL I Sbjct: 360 PLEELGYHIY 369 >gi|24639740|ref|NP_726945.1| lethal (1) G0334, isoform C [Drosophila melanogaster] gi|7290525|gb|AAF45977.1| lethal (1) G0334, isoform C [Drosophila melanogaster] gi|323301254|gb|ADX35969.1| RH59152p [Drosophila melanogaster] Length = 443 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 159/344 (46%), Positives = 218/344 (63%), Gaps = 12/344 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF EG + K+Q L Y M IRR E AG LY ++ G Sbjct: 78 ATEATVQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLETAAGNLYKEKIIRG 137 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV S ++AELTG QGG ++GK Sbjct: 138 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPSGVLAELTGVQGGCARGK 197 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM++ FYGG+GIVGAQV LG G+ A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 198 GGSMHMYAP--NFYGGNGIVGAQVPLGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEA 255 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 256 YNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 313 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y GP+++E TYRY GHSMSDP YRTREEI E+R DPI ++ + Sbjct: 314 TEFAINYV-NTHGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 372 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + ++K I++ VRK ++ + FA+SD E + L++D+ Sbjct: 373 ELGLITTDEVKAIDLKVRKEVDEATAFAKSDAELGVSHLWTDVY 416 >gi|157691244|ref|YP_001485706.1| dihydrolipoyl dehydrogenase E1 alpha subunit [Bacillus pumilus SAFR-032] gi|157680002|gb|ABV61146.1| dihydrolipoyl dehydrogenase E1 alpha subunit [Bacillus pumilus SAFR-032] Length = 325 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 121/318 (38%), Positives = 181/318 (56%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KE+ + Y+ M IR+FE++ L+ G++ GF HL G+EAV VG+ L E D + Sbjct: 5 LTKEKAVWMYQKMQEIRQFEDQVHTLFTKGILPGFVHLYAGEEAVAVGVCAHLNEQDSIT 64 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GIVG L Sbjct: 65 STHRGHGHCIAKGCDLKGMMAEIYGKATGLCKGKGGSMHIADFDKGMLGANGIVGGGFPL 124 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY++++ + V FGDGA NQG +E N+AA+W L VI++ ENN Y T Sbjct: 125 ACGAALTAKYKKTNNVSVCFFGDGANNQGTFHEGINLAAIWKLPVIFIAENNGYGEATPF 184 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S AS+ + R ++IPG+QVDG D+ AV ++A+ + +GP +IE +TYR G Sbjct: 185 SYASSCKSIVDRAAGYDIPGIQVDGKDVMAVYQAAEQAIERAKNGEGPTLIECMTYRNYG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D Y+T +E E + D I + L+ + + G+L IE V I+ +V F Sbjct: 245 HFEGDAQRYKTNQEKTEHQEERDAIALFKNELIKQQLLTNGELSNIEAAVADAIDEAVRF 304 Query: 347 AQSDKEPDPAELYSDILI 364 ++ + PD EL +D+ + Sbjct: 305 SEESEYPDHTELLTDVYV 322 >gi|322376555|ref|ZP_08051048.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. M334] gi|321282362|gb|EFX59369.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. M334] Length = 322 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 123/321 (38%), Positives = 185/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQHTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRSGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLIENTIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|323700511|ref|ZP_08112423.1| dehydrogenase E1 component [Desulfovibrio sp. ND132] gi|323460443|gb|EGB16308.1| dehydrogenase E1 component [Desulfovibrio desulfuricans ND132] Length = 319 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 118/317 (37%), Positives = 180/317 (56%), Gaps = 1/317 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +K+ + Y M IR FE+K + + G + GF HL IG+EAV G +LT+ D + Sbjct: 3 LSKKTLVHMYETMNKIRLFEQKLQEFFAAGEIPGFVHLYIGEEAVATGACSALTDADMIT 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH+LA G D +MAE+ GR G KGKGGSMH+ G G +GIVG L Sbjct: 63 STHRGHGHLLAKGGDLKLMMAEIFGRSTGYCKGKGGSMHIADLNLGILGANGIVGGGGPL 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A A+KY+++ + V FGDGA+NQG E+ N A+ W L +++V ENN Y + Sbjct: 123 AVGSALASKYKQTKDVTVCFFGDGASNQGTTQEALNAASAWKLPLVFVNENNGYGISCPQ 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ++ A + + R ++++PG+ VDG D+ AV + +AV R +GP +IE TYR+RG Sbjct: 183 CKSMAVVDIADRAAAYDMPGVVVDGNDVLAVYEAVTEAVKRARKGEGPSLIECKTYRWRG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D YR EE+ E + DPI + +L+ K ++ + +I+ ++ K I+ +V F Sbjct: 243 HFEGDACTYRCTEELEEWMAK-DPIPRFEAKLVEGKTLTQNEADKIKESIAKDIDEAVAF 301 Query: 347 AQSDKEPDPAELYSDIL 363 A+ P + L D+ Sbjct: 302 AKESPMPKTSALMDDVY 318 >gi|269123973|ref|YP_003306550.1| Pyruvate dehydrogenase (acetyl-transferring) [Streptobacillus moniliformis DSM 12112] gi|268315299|gb|ACZ01673.1| Pyruvate dehydrogenase (acetyl-transferring) [Streptobacillus moniliformis DSM 12112] Length = 322 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 119/321 (37%), Positives = 184/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + KEQ L ++ M R F+ K QL G V G H +G+EA VG +L + D Sbjct: 1 MEKLTKEQLLDMFKKMQEARIFDLKVAQLVKKGKVPGMTHFSVGEEAASVGAIAALNDDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R H ++A G+D + +MAE+ G+ GI KGKGGSMH+ +G G +GIVG Sbjct: 61 IITSNHRGHAQVIAKGIDLNAMMAEILGKYTGICKGKGGSMHIADVDSGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + G A + +++ KI V FGDGA N+G +E+ N+A++W L VI+ NN Y + Sbjct: 121 HGISVGAALTQQMKKTGKIVVCFFGDGATNEGSFHEALNMASIWKLPVIFYSINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + R S+ IPGM + DG ++ V KAV Y R GP++IE +TY Sbjct: 181 ADIKKMTNIEHIHLRSASYGIPGMFILDGNNVLDVYEEFKKAVDYVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRT+EE+ DP+E +RK L+ N A+E +L +I+ +V+K +++ Sbjct: 241 RWLGHSSSDPGKYRTKEEVETW-KKKDPVENLRKYLIENNIATEQELLDIDASVKKAVDD 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 +V FA++ P + DI Sbjct: 300 AVVFAENSPLPPLESAFEDIY 320 >gi|327460391|gb|EGF06728.1| acetoin dehydrogenase E1 component subunit alpha [Streptococcus sanguinis SK1057] Length = 357 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 121/345 (35%), Positives = 190/345 (55%), Gaps = 2/345 (0%) Query: 21 VSAKRAATSSVDCVDIPFLEG--FEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMV 78 ++ R+ + + VD+ + EV + +KE+ Y+ M IR FEE + + G + Sbjct: 11 LTKTRSQGAVSELVDLKVHDATEVEVEQISKEKAKIMYKTMWDIRNFEENTRRFFAAGQI 70 Query: 79 GGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK 138 GF HL G+EA+ G+ +LT+ D + + +R HGH +A G D +MAE+ G++ G+ K Sbjct: 71 PGFVHLYAGEEAIATGVCANLTDQDYITSTHRGHGHCVAKGGDLKGMMAEIFGKETGLGK 130 Query: 139 GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 GKGGSMH+ G G +G+VG L TG A NKY ++D + V FGDGAAN+G + Sbjct: 131 GKGGSMHIADLDKGILGANGMVGGGFGLATGAAMRNKYLKTDSVAVCFFGDGAANEGNFH 190 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 E N+AA+W L VI+V ENN +A T +SA ++R ++N+PG++V+G D+ AV Sbjct: 191 ECLNMAAIWKLPVIFVNENNFFAESTPQWYSSASGTIAERAAAYNMPGVRVNGKDLFAVY 250 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 +AV R +GP +IE +TYR GH D Y+ E + ++ D ++ R Sbjct: 251 QVAKEAVERARRGEGPTLIEAVTYRDHGHFEGDEQKYKALEGEEKDWADVDALDVFRDYA 310 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + + +E +L I RK + +++FAQ P L D+ Sbjct: 311 IEHGLLTEEELDAILEESRKDVEEAIKFAQDSPIPRSESLLEDVF 355 >gi|218437585|ref|YP_002375914.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Cyanothece sp. PCC 7424] gi|218170313|gb|ACK69046.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cyanothece sp. PCC 7424] Length = 344 Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats. Identities = 142/326 (43%), Positives = 210/326 (64%), Gaps = 9/326 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQ 104 + +KE+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ +L D Sbjct: 16 DISKEEGLILYEDMVLGRMFEDKCAEMYYRGQMFGFVHLYNGQEAVSTGIIKALRPDEDY 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + YR+H H L+CG+ A ++MAEL G++ G SKG+GGSMH+FS K+ GG V + Sbjct: 76 VCSTYRDHVHGLSCGIPAKEVMAELFGKETGCSKGRGGSMHLFSEKHRLLGGFAFVAEGI 135 Query: 165 SLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + TG AF +YRR D++ V FGDGA+N GQ +E N++ALW L +IYV+EN Sbjct: 136 PVATGAAFQTRYRRDALGDPNADQVTVCFFGDGASNNGQFFECLNMSALWKLPIIYVVEN 195 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G + +RA++Q K+ F++PG++VDGMD+ AV+ +A+A RA +GP +I Sbjct: 196 NKWAIGMAHNRATSQPEVYKKASVFDLPGVEVDGMDVLAVRNVAKEAIARARAGEGPTLI 255 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP R+ +E + S DPI + LL + A++ +L EIE V+ Sbjct: 256 EALTYRFRGHSLADPDELRSSDE-KQFWSARDPISRFGSFLLEHDLATQEELTEIEKKVQ 314 Query: 338 KIINNSVEFAQSDKEPDPAELYSDIL 363 K+I ++V+FAQ EPDP+EL I Sbjct: 315 KVIEDAVKFAQESPEPDPSELRRYIF 340 >gi|322389584|ref|ZP_08063133.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus parasanguinis ATCC 903] gi|321143710|gb|EFX39139.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus parasanguinis ATCC 903] Length = 323 Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats. Identities = 123/321 (38%), Positives = 186/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L + D Sbjct: 2 MATLDKSLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNDDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 62 LLTSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 122 MGIAVGAALTQQMKKTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 181 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 182 ADIKKMTNIQHIHERSAAYGIPGMFIPDGNNVIDVYEGFQKAVEHVRSGKGPVLIESVTY 241 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK LL N+ AS +L +I+ V++ + Sbjct: 242 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLLENEIASAEELDKIQEEVKEAVEA 300 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 301 SVKFAEESPFPPLESAFEDIY 321 >gi|157849684|gb|ABV89625.1| pyruvate dehydrogenase complex E1 alpha subunit dehydrogenase [Brassica rapa] Length = 389 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 159/367 (43%), Positives = 231/367 (62%), Gaps = 11/367 (2%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFL-----EGFEVSEFNKEQELSAYRL 58 ++ ++ + A S+S T +PF E + ++ LS +R Sbjct: 8 SRSNIISRPLSAAFRRSISTD--TTPITIETSLPFTAHLCDPPSRSVESSTQELLSFFRT 65 Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M L+RR E A LY ++ GFCHL GQEAV +GM+ ++T+ D +ITAYR+H L Sbjct: 66 MALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKKDAIITAYRDHCIFLGR 125 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G ++ AEL GRQ G S+GKGGSMH + + FYGGHGIVGAQV LG GIAFA KY + Sbjct: 126 GGSLYEVFAELMGRQDGCSRGKGGSMHFYKKDSSFYGGHGIVGAQVPLGCGIAFAQKYSK 185 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ RA+ ++ KR Sbjct: 186 EEAVTFAMYGDGAANQGQLFEALNISALWDLPSILVCENNHYGMGTAEWRAAKSPSYYKR 245 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRT 297 G +PG++VDGMD AVK A + + GPII+EM TYRY GHSMSDP + YRT Sbjct: 246 GDY--VPGLKVDGMDAFAVKQACKFAKEHALKN-GPIILEMDTYRYHGHSMSDPGSTYRT 302 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 R+EI+ +R DPIE+++K +L + A+E +LK++E +RK +++++ A+ P+P+E Sbjct: 303 RDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAKDCPMPEPSE 362 Query: 358 LYSDILI 364 L++++ + Sbjct: 363 LFTNVYV 369 >gi|284053724|ref|ZP_06383934.1| pyruvate dehydrogenase (lipoamide) [Arthrospira platensis str. Paraca] gi|291570198|dbj|BAI92470.1| pyruvate dehydrogenase E1 alpha subunit [Arthrospira platensis NIES-39] Length = 343 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 142/325 (43%), Positives = 201/325 (61%), Gaps = 9/325 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 +E+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ S+ + D + Sbjct: 17 ITREEGLMLYEDMVLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIRSMRRDEDFV 76 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS+K+ GG V + Sbjct: 77 CSTYRDHVHALSAGVTAREVMAELFGKATGCSKGRGGSMHMFSSKHNLLGGFAFVAEGIP 136 Query: 166 LGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + TG AF +KYRR D + FGDGA N GQ YE N+A LW L +++V+ENN Sbjct: 137 VATGAAFQSKYRREVMGDESSDTVTACFFGDGACNNGQFYECLNMATLWKLPILFVVENN 196 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 ++A+G + RA++ K+G +F +PG +VDGMD+ AV+ KA+A RA +GP +IE Sbjct: 197 KWAIGMAHERATSDPEIYKKGPAFGMPGYEVDGMDVLAVREVAQKAIARARAGEGPTLIE 256 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 LTYR+RGHS++DP R R+E E DPI + L + A +LK I+ V+ Sbjct: 257 ALTYRFRGHSLADPDELRDRDE-KEFWFARDPINKFFAYLTEHNLADSDELKAIDKKVQD 315 Query: 339 IINNSVEFAQSDKEPDPAELYSDIL 363 +IN++VEFAQ+ EPDP+ELY + Sbjct: 316 VINDAVEFAQTSPEPDPSELYRYVY 340 >gi|197118638|ref|YP_002139065.1| pyruvate dehydrogenase complex, E1 protein subunit alpha [Geobacter bemidjiensis Bem] gi|197087998|gb|ACH39269.1| pyruvate dehydrogenase complex, E1 protein, alpha subunit [Geobacter bemidjiensis Bem] Length = 325 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 132/318 (41%), Positives = 188/318 (59%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E L Y M+L R FEE + Y G + GF HL GQEAV VG L D ++ Sbjct: 9 LPEEDLLKFYEQMVLCREFEESCAEQYSKGHITGFLHLYSGQEAVAVGCTAGLQPADYVL 68 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +AYR+H + G D ++MAEL G+ G+ KGKGGSMH+F+ + F GG+ IVG Q + Sbjct: 69 SAYRDHAQAIVRGADPKRVMAELFGKATGLCKGKGGSMHLFAPELNFMGGYAIVGGQFPI 128 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A+ ++ + D+I FGDG+ NQG +ES N A LW+L V+++ ENN Y +GT V Sbjct: 129 AIGLAWGSQLQEQDRITACFFGDGSMNQGTFHESLNWARLWDLPVLFICENNFYGIGTEV 188 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASAQ +R ++IP +VDGMD+ A+ +A + R H+ P IE +TYR+RG Sbjct: 189 HRASAQAALHRRTCGYDIPSEKVDGMDVVAMYQATKRAAEWVREHQRPYFIEAVTYRFRG 248 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YR+ E E+ + DPI + +RL A + L EI N + +V F Sbjct: 249 HSMSDPAKYRSSSE-AEVWKSRDPIPNLSRRLQEEGIADQARLDEINRNALAQVQEAVRF 307 Query: 347 AQSDKEPDPAELYSDILI 364 A+ P+ +E++SDI + Sbjct: 308 AEDSPWPEDSEIWSDIYV 325 >gi|76160956|gb|ABA40441.1| unknown [Solanum tuberosum] Length = 391 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 158/374 (42%), Positives = 231/374 (61%), Gaps = 13/374 (3%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCV----DIPFL-----EGFEVSEFNKEQ 51 M ++ K + +R ++ S + +PF E + ++ Sbjct: 1 MALSTSRAINHITKPLSAAVYATRRLSSDSTATITVETSLPFTSHNIDPPSRSVETSPKE 60 Query: 52 ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 ++ ++ M +RR E A LY ++ GFCHL GQEAV VGM+ ++T+ D +ITAYR+ Sbjct: 61 LMTFFKDMTEMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCIITAYRD 120 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 H L G + AEL GR+ G S+GKGGSMH + +NGFYGGHGIVGAQV LG G+A Sbjct: 121 HCIFLGRGGTLVESFAELMGRRDGCSRGKGGSMHFYKKENGFYGGHGIVGAQVPLGIGLA 180 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 FA KY++ D + +GDGAANQGQ++E+ N+AALW+L I V ENN Y MGT+ RA+ Sbjct: 181 FAQKYKKEDYVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAK 240 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + KRG +PG++VDGMD+ AVK A + + GPII+EM TYRY GHSMSD Sbjct: 241 SPAYYKRGDY--VPGLRVDGMDVFAVKQACTFAKQHALKN-GPIILEMDTYRYHGHSMSD 297 Query: 292 P-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 P + YRTR+EI+ +R DP+E++R +L + A+E +LK+IE RK+++ ++ A+ Sbjct: 298 PGSTYRTRDEISGVRQERDPVERIRSLILAHNIATEAELKDIEKENRKVVDEAIAKAKES 357 Query: 351 KEPDPAELYSDILI 364 PDP+EL++++ + Sbjct: 358 PMPDPSELFTNVYV 371 >gi|168047071|ref|XP_001775995.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672653|gb|EDQ59187.1| predicted protein [Physcomitrella patens subsp. patens] Length = 440 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 134/362 (37%), Positives = 203/362 (56%), Gaps = 19/362 (5%) Query: 11 GDIKMALNPS--VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEK 68 G+++ A++ S V+ K + S D D+ K++ L Y M+L R FE+ Sbjct: 61 GNVRAAVSASKAVTEKPNSGSKSDKADLL---------VTKDEGLELYEDMVLGRSFEDM 111 Query: 69 AGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAE 128 Q+Y G + GF HL GQEAV G L + D + + YR+H H L+ GV A ++MAE Sbjct: 112 CAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKQTDFVTSTYRDHVHALSKGVPARQVMAE 171 Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS-------DK 181 L G+ G +G+GGSMHMFS ++G GG +G + + G AF +KY+R Sbjct: 172 LFGKSTGCCRGQGGSMHMFSAEHGLLGGFAFIGEGIPVAVGAAFTSKYKREVLKEEGDMP 231 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 + + FGDG AN GQ +E N+A LW L VI+V+ENN +A+G S R+++ K+G + Sbjct: 232 VSIAFFGDGTANNGQFFECLNMAQLWKLPVIFVVENNLWAIGMSHYRSTSDPEIWKKGPA 291 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEI 301 F + VDGMD+ V+ +AV R GP +IE TYR+RGHS++DP R E Sbjct: 292 FGMASAHVDGMDVLKVREVAKEAVERARRGDGPTLIECETYRFRGHSLADPDELRAPAEK 351 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 + DPI ++K LL N+ A+E +LK IE + +++ ++VEFA + P ++L + Sbjct: 352 AHY-AARDPIVALKKYLLDNEIATEAELKSIEKKIDEVVEDAVEFADASPLPGRSQLLEN 410 Query: 362 IL 363 + Sbjct: 411 VF 412 >gi|296876497|ref|ZP_06900548.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus parasanguinis ATCC 15912] gi|296432490|gb|EFH18286.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus parasanguinis ATCC 15912] Length = 323 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 122/321 (38%), Positives = 185/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L + D Sbjct: 2 MATLDKSLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNDDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 62 LLTSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++W L VI+ NN Y + Sbjct: 122 MGIAVGAALTQQMKKTGKIVVCFFGDGATNEGVFHEAVNMASIWKLPVIFYCINNGYGIS 181 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R+ KGP++IE +TY Sbjct: 182 ADIKKMTNIQHIHERSAAYGIPGMFIPDGNNVIDVYEGFQKAVEHVRSGKGPVLIESVTY 241 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E DPIE +RK LL N+ AS +L +I+ V++ + Sbjct: 242 RWLGHSSSDPGKYRTREEVEEW-KKKDPIENLRKYLLKNEIASAEELDQIQEEVKEAVEA 300 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 301 SVKFAEESPFPPLESAFEDIY 321 >gi|83596041|gb|ABC25399.1| pyruvate dehydrogenase E1 component, alpha subunit [uncultured marine bacterium Ant39E11] Length = 331 Score = 345 bits (886), Expect = 6e-93, Method: Composition-based stats. Identities = 140/319 (43%), Positives = 199/319 (62%), Gaps = 1/319 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + + L Y M R+FE+ LY + GF HL GQEA++ G +++ +GD+ Sbjct: 4 KKLTQAVYLKWYEDMSFWRKFEDMCSALYIQQKIRGFLHLYNGQEAILAGSLLAMNKGDK 63 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 MITAYR H + GVD ++MAEL GR G S+GKGGSMH+FS ++ F+GGHGIVG Q+ Sbjct: 64 MITAYRNHVQPIGLGVDPRRVMAELMGRVDGTSRGKGGSMHIFSKEHNFFGGHGIVGGQI 123 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG GIAFA+KY+ D + + GDGA QG ++E+FN+A LWNL V++++ENN YAMGT Sbjct: 124 PLGAGIAFADKYQDKDHVTLTYMGDGATRQGALHETFNLAMLWNLPVVFIVENNGYAMGT 183 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV R + + K G+ + +P VDGMD A + +AV R GP +E+ TYRY Sbjct: 184 SVERTANHSEIWKLGLGYEMPCQAVDGMDPAITYAAIQEAVDRARNGGGPTFLEIRTYRY 243 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +GHSMSD YRT+ E++E DPI ++ LL KWA++ DL+ I+ V+ ++ V Sbjct: 244 KGHSMSDAQLYRTKGEVSEY-QKVDPILTSKEMLLKKKWATKEDLEVIDQRVKALVAECV 302 Query: 345 EFAQSDKEPDPAELYSDIL 363 EFA + P+ EL+ + Sbjct: 303 EFASNSPFPEGHELFKHVY 321 >gi|154318926|ref|XP_001558781.1| hypothetical protein BC1G_02852 [Botryotinia fuckeliana B05.10] gi|150857982|gb|EDN33174.1| hypothetical protein BC1G_02852 [Botryotinia fuckeliana B05.10] Length = 409 Score = 345 bits (886), Expect = 6e-93, Method: Composition-based stats. Identities = 166/373 (44%), Positives = 229/373 (61%), Gaps = 15/373 (4%) Query: 2 YVAKQDVTVGDIKM-ALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELS 54 + K+ VT A +V + ++ D F E +E+ E K++ Sbjct: 23 ALVKRTVTTDAASAHADKDAVPQEDDKPFTLQLSDESF-ETYELDPPSYTMETTKKELKQ 81 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y M+ +RR E A +LY + GFCHL GQEAV VG++ SLT+ D +ITAYR HG Sbjct: 82 MYIDMVSMRRMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHSLTKEDDIITAYRCHGF 141 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 L G I+ EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV +G G+AFA+ Sbjct: 142 ALMRGASVKSIIGELLGRREGIAYGKGGSMHMFTK--GFYGGNGIVGAQVPVGAGLAFAH 199 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 +Y + + V +GDGA+NQGQV+E+FN+A LW L V++ ENN+Y MGT+ +R+SA T+ Sbjct: 200 QYNGNKNVSVALYGDGASNQGQVFEAFNMAKLWKLPVLFGCENNKYGMGTAANRSSALTD 259 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++V+GMD AVKA + A Y A GP+++E +TYRY GHSMSDP Sbjct: 260 YYKRGQY--IPGLKVNGMDALAVKAAVKHAKEYANAGNGPLVLEYVTYRYGGHSMSDPGT 317 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTREEI MRS DPI ++++L+ +E +LK I+ R ++ V+ A+ P Sbjct: 318 TYRTREEIQRMRSTQDPIAGLKQKLIEWNVTTEDELKAIDKEARAKVDAEVKEAEEMPFP 377 Query: 354 D--PAELYSDILI 364 D P LY DI + Sbjct: 378 DATPQILYEDIYV 390 >gi|306829531|ref|ZP_07462721.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus mitis ATCC 6249] gi|304428617|gb|EFM31707.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus mitis ATCC 6249] Length = 322 Score = 345 bits (886), Expect = 6e-93, Method: Composition-based stats. Identities = 122/321 (38%), Positives = 181/321 (56%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQHTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHHRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V+ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENNIASVEELEEIQAQVKTAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|307189557|gb|EFN73927.1| Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [Camponotus floridanus] Length = 396 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 154/319 (48%), Positives = 214/319 (67%), Gaps = 5/319 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 ++ + ++ + IRR E AG LY ++ GFCHL GQEA VGMK ++ D + Sbjct: 54 TVTRDDAIELFKKLHTIRRIETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRPQDAV 113 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG G++ + AELTGRQGG +KGKGGSMHM+ FYGG+GIVGAQV Sbjct: 114 ITAYRAHGWTYLMGIEPFGVFAELTGRQGGNAKGKGGSMHMY--AKNFYGGNGIVGAQVP 171 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY + +C+ +GDGAANQGQV+E +N+A LW++ I+V ENN Y MGTS Sbjct: 172 LGVGIAFAQKYINNGGVCLALYGDGAANQGQVFEVYNMAKLWDVPCIFVCENNGYGMGTS 231 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V RA+A T++ RG +PG+ +DGMD+ AV+ A+ +C + KGPII+E +TYRY Sbjct: 232 VERAAASTDYYTRGDY--VPGIWIDGMDVLAVREATKFAIEHCTSGKGPIIMETMTYRYS 289 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YRTREE+ E+R DP+ ++R+L+ + ++K IE +RK ++++V Sbjct: 290 GHSMSDPGTSYRTREEVQEVRQTRDPLTSFKERILNANLVTADEIKTIEGEIRKSVDDAV 349 Query: 345 EFAQSDKEPDPAELYSDIL 363 + A++DKE +EL +DI Sbjct: 350 KAAKNDKEIPLSELTADIY 368 >gi|154287036|ref|XP_001544313.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Ajellomyces capsulatus NAm1] gi|150407954|gb|EDN03495.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Ajellomyces capsulatus NAm1] Length = 405 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 162/369 (43%), Positives = 226/369 (61%), Gaps = 14/369 (3%) Query: 5 KQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAYRL 58 + D A ++ A+ +V D F E +E+ E K++ YR Sbjct: 23 VRRSVTTDAASAHAEAIPAEEDKPFTVKLSDESF-ETYELDPPPYTLETTKQELKQMYRD 81 Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ IRR E A +LY + GFCHL GQEAV G++ ++T+ D++ITAYR HG L Sbjct: 82 MVSIRRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAITKDDKLITAYRCHGFALLR 141 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G I+ EL GR+ GI+ GKGGSMHMF FYGG+GIVGAQV +G G+AF+ +Y Sbjct: 142 GGTVKSIIGELLGRREGIAYGKGGSMHMF--AKNFYGGNGIVGAQVPVGAGLAFSQQYND 199 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + +GDGA+NQGQV+E+FN+A LWNL I+ ENN+Y MGT+ SRA+A T++ KR Sbjct: 200 EKTTTIALYGDGASNQGQVFEAFNMAKLWNLPCIFGCENNKYGMGTAASRAAALTDYYKR 259 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRT 297 G IPG++++GMD+ A+KA + Y + KGP++ E +TYRY GHSMSDP YRT Sbjct: 260 GQY--IPGLKINGMDVLAIKAAVQYGREYTTSGKGPLVFEYVTYRYGGHSMSDPGTTYRT 317 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--P 355 REEI MRS +DPI ++++LL SE +LK I+ + RK +++ V A+ EPD P Sbjct: 318 REEIQRMRSTNDPIAGLKQKLLDWGVTSEEELKAIDKDARKYVDDEVAEAELMTEPDATP 377 Query: 356 AELYSDILI 364 L+ D + Sbjct: 378 RILFEDTYV 386 >gi|6679263|ref|NP_032837.1| pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial precursor [Mus musculus] gi|548411|sp|P35487|ODPAT_MOUSE RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; AltName: Full=PDHE1-A type II; Flags: Precursor gi|567231|gb|AAA53047.1| pyruvate dehydrogenase [Mus musculus] gi|26345662|dbj|BAC36482.1| unnamed protein product [Mus musculus] gi|72679669|gb|AAI00461.1| Pdha2 protein [Mus musculus] gi|148680125|gb|EDL12072.1| pyruvate dehydrogenase E1 alpha 2 [Mus musculus] Length = 391 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 160/347 (46%), Positives = 230/347 (66%), Gaps = 7/347 (2%) Query: 20 SVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 S+ AT + D+ LE G S + + L YR M +IRR E KA QLY Sbjct: 28 SLKFSNDATCDIKKCDLYRLEEGPPTSTVLTRAEALKYYRTMQVIRRMELKADQLYKQKF 87 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 + GFCHLC GQEA VG++ + D +IT+YR HG G+ I+AELTGR+GG + Sbjct: 88 IRGFCHLCDGQEACCVGLEAGINPTDHVITSYRAHGFCYTRGLSVKSILAELTGRKGGCA 147 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHM+ FYGG+GIVGAQV LG G+AFA KY ++ ++C+ +GDGAANQGQV Sbjct: 148 KGKGGSMHMYGK--NFYGGNGIVGAQVPLGAGVAFACKYLKNGQVCLALYGDGAANQGQV 205 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 +E++N++ALW L +++ ENN Y MGTS R++A T++ K F IPG++V+GMDI V Sbjct: 206 FEAYNMSALWKLPCVFICENNLYGMGTSNERSAASTDYHK--KGFIIPGLRVNGMDILCV 263 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRK 316 + A +CR+ KGPI++E+ TYRY GHSMSDP +YR+REE++ +RS DPI +R+ Sbjct: 264 REATKFAADHCRSGKGPIVMELQTYRYHGHSMSDPGISYRSREEVHNVRSKSDPIMLLRE 323 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R++ N ++ +LKEI+ +V+K + ++ +FA +D EP ++ + + Sbjct: 324 RIISNNLSNIEELKEIDADVKKEVEDAAQFATTDPEPAVEDIANYLY 370 >gi|227829707|ref|YP_002831486.1| dehydrogenase E1 component [Sulfolobus islandicus L.S.2.15] gi|227456154|gb|ACP34841.1| dehydrogenase E1 component [Sulfolobus islandicus L.S.2.15] Length = 332 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 121/327 (37%), Positives = 185/327 (56%), Gaps = 8/327 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + K + L Y+ MLLIR E A +L+ +G + GF HL +G+EAV VG+ +L + D Sbjct: 2 VQDIPKSKLLDMYKKMLLIRYHELTAKELFAIGKIPGFVHLYVGEEAVAVGVMSTLRDDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A G+D +++AE+ G++ G+ KGKGGSMH+F G G +GIVG Sbjct: 62 YITSTHRGHGHCIAKGLDVKRMLAEIMGKKTGVCKGKGGSMHIFDYSKGMLGANGIVGGG 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A A K + D++ GDGA NQG V ES N++A+W L V++++E+N YAM Sbjct: 122 APHAVGAALAFKLKGLDRVAAAFIGDGAMNQGVVLESLNLSAIWKLPVVFIVEDNMYAMS 181 Query: 224 TS-------VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 T SA ++ +R + F IP ++VDGMD+ AV +AV R GP + Sbjct: 182 TRSLAPAKLQPSHSAAKSYVERALGFGIPAVEVDGMDVLAVYEVAKEAVEKARKGGGPSL 241 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 + TYR+ GH D YR +EE EM DPI R +L+ N ++ +L +I+ Sbjct: 242 LHCKTYRFFGHFEGDSLVYRDKEE-EEMWRKRDPITLFRDKLVSNDIVNQEELDKIDREA 300 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 + I +++FA+ P+ E +D+ Sbjct: 301 KTEIEQALKFAEESPYPEVEEALTDVF 327 >gi|15218940|ref|NP_176198.1| AT-E1 ALPHA; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring) [Arabidopsis thaliana] gi|27735220|sp|P52901|ODPA1_ARATH RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|5080822|gb|AAD39331.1|AC007258_20 pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|21593256|gb|AAM65205.1| pyruvate dehydrogenase e1 alpha subunit, putative [Arabidopsis thaliana] gi|24030439|gb|AAN41374.1| putative pyruvate dehydrogenase e1 alpha subunit [Arabidopsis thaliana] gi|332195517|gb|AEE33638.1| pyruvate dehydrogenase complex E1 alpha subunit [Arabidopsis thaliana] Length = 389 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 158/372 (42%), Positives = 234/372 (62%), Gaps = 11/372 (2%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVD--IPFL-----EGFEVSEFNKEQEL 53 M +++ I + + S + ++ ++ +PF E + ++ L Sbjct: 1 MALSRLSSRSNIITRPFSAAFSRLISTDTTPITIETSLPFTAHLCDPPSRSVESSSQELL 60 Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 +R M L+RR E A LY ++ GFCHL GQEAV +GM+ ++T+ D +ITAYR+H Sbjct: 61 DFFRTMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKKDAIITAYRDHC 120 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 L G ++ +EL GRQ G SKGKGGSMH + ++ FYGGHGIVGAQV LG GIAFA Sbjct: 121 IFLGRGGSLHEVFSELMGRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVPLGCGIAFA 180 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ RA+ Sbjct: 181 QKYNKEEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTAEWRAAKSP 240 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP- 292 ++ KRG +PG++VDGMD AVK A + KGPII+EM TYRY GHSMSDP Sbjct: 241 SYYKRGDY--VPGLKVDGMDAFAVKQACKFAKQHA-LEKGPIILEMDTYRYHGHSMSDPG 297 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 + YRTR+EI+ +R DPIE+++K +L + A+E +LK++E +RK +++++ A+ Sbjct: 298 STYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAKDCPM 357 Query: 353 PDPAELYSDILI 364 P+P+EL++++ + Sbjct: 358 PEPSELFTNVYV 369 >gi|215261376|pdb|3EXH|C Chain C, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex gi|215261380|pdb|3EXH|G Chain G, Crystal Structure Of The Pyruvate Dehydrogenase (E1p) Component Of Human Pyruvate Dehydrogenase Complex Length = 382 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 175/347 (50%), Positives = 231/347 (66%), Gaps = 7/347 (2%) Query: 20 SVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 S AT + D+ LE G V+ +E L YR+M +RR E KA QLY + Sbjct: 19 SHMFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKI 78 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 + GFCHLC GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG + Sbjct: 79 IRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCA 138 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHM+ FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ+ Sbjct: 139 KGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQI 196 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 +E++N+AALW L I++ ENN+Y MGT+V RA+A T++ KRG IPG++VDGMDI V Sbjct: 197 FEAYNMAALWKLPCIFICENNRYGMGTAVERAAASTDYYKRGDF--IPGLRVDGMDILCV 254 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRK 316 + A AYCR+ KGPI++E+ TYRY GH MSDP YRTREEI E+RS DPI ++ Sbjct: 255 REATRFAAAYCRSGKGPILMELQTYRYHGHXMSDPGVAYRTREEIQEVRSKSDPIMLLKD 314 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R++++ AS +LKEI++ VRK I ++ +FA +D EP EL I Sbjct: 315 RMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIY 361 >gi|50311201|ref|XP_455624.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|52788216|sp|O13366|ODPA_KLULA RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|49644760|emb|CAG98332.1| KLLA0F12001p [Kluyveromyces lactis] Length = 412 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 153/361 (42%), Positives = 221/361 (61%), Gaps = 15/361 (4%) Query: 15 MALNPSVSAKRAATSSVDCVDIP--FLEGF--EVSEFN----KEQELSAYRLMLLIRRFE 66 AL+ + + +D+P EG+ +V E + K L Y+ M+++RR E Sbjct: 28 RALSQVADETKPGDDDLVQIDLPETSFEGYLLDVPELSYQTTKSNLLQMYKDMIIVRRME 87 Query: 67 EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIM 126 LY + GFCH +GQEA+ VG++ ++T+ D +IT+YR HG G ++ Sbjct: 88 MACDALYKAKKIRGFCHSSVGQEAIAVGIENAITKRDTVITSYRCHGFTYMRGAAVQAVL 147 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 AEL GR+ G+S GKGGSMH+++ GFYGG+GIVGAQV LG G+AFA++Y+ D Sbjct: 148 AELMGRRTGVSFGKGGSMHLYAP--GFYGGNGIVGAQVPLGAGLAFAHQYKHEDACSFAL 205 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPG 246 +GDGA+NQGQV+ESFN+A LWNL ++ ENN+Y MGT+ +R+SA T + KRG IPG Sbjct: 206 YGDGASNQGQVFESFNMAKLWNLPAVFCCENNKYGMGTAAARSSAMTEYFKRGQY--IPG 263 Query: 247 MQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMR 305 ++V+GMDI AV A + + GPI++E TYRY GHSMSDP YRTR+EI MR Sbjct: 264 LKVNGMDILAVYQASKFAKDWTVSGNGPIVLEYETYRYGGHSMSDPGTTYRTRDEIQHMR 323 Query: 306 SNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AELYSDIL 363 S +DPI ++ LL A+E ++K + RK ++ VE A + P+ + L+ D+ Sbjct: 324 SKNDPIAGLKMHLLELGIATEDEIKAYDKAARKYVDEQVELADAAPAPEAKMSILFEDVY 383 Query: 364 I 364 + Sbjct: 384 V 384 >gi|258569885|ref|XP_002543746.1| pyruvate dehydrogenase E1 component alpha subunit [Uncinocarpus reesii 1704] gi|237904016|gb|EEP78417.1| pyruvate dehydrogenase E1 component alpha subunit [Uncinocarpus reesii 1704] Length = 404 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 158/369 (42%), Positives = 220/369 (59%), Gaps = 14/369 (3%) Query: 5 KQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAYRL 58 + + A V + ++ D F E +E+ E K++ YR Sbjct: 22 ARRTVTTNAASAHAEDVPTEDDKPFTIKLSDESF-ETYELDPPPYSLEVTKKELKQMYRD 80 Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ +RR E + +LY + GFCHL GQEAV VG++ +L D++ITAYR HG Sbjct: 81 MVAVRRMEMASDRLYKEKKIRGFCHLSTGQEAVAVGIEHALNREDKLITAYRCHGFAYMR 140 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G I+ EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV +G G+AFA +Y Sbjct: 141 GGTIKSIIGELLGRREGIAYGKGGSMHMFAP--GFYGGNGIVGAQVPVGAGLAFAQQYEG 198 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 V +GDGA+NQGQV+E+FN+A LW L VI+ ENN+Y MGT+ +R+SA T++ KR Sbjct: 199 KQNATVCLYGDGASNQGQVFEAFNMAKLWKLPVIFGCENNKYGMGTAANRSSAMTDYYKR 258 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRT 297 G IPG++++GMD+ A+KA + Y A GP++ E +TYRY GHSMSDP YRT Sbjct: 259 GQY--IPGLKINGMDVLAIKAAIKYGREYTLAGHGPLVYEYVTYRYGGHSMSDPGTTYRT 316 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--P 355 REEI MRS +DPI ++++LL +E +LK I+ R ++ V A+ PD P Sbjct: 317 REEIQRMRSTNDPIAGLKQKLLDWNVTTEEELKTIDKETRSYVDAEVAEAEKMPVPDATP 376 Query: 356 AELYSDILI 364 L+ DI + Sbjct: 377 RILFEDIYV 385 >gi|332373348|gb|AEE61815.1| unknown [Dendroctonus ponderosae] Length = 398 Score = 345 bits (885), Expect = 8e-93, Method: Composition-based stats. Identities = 154/319 (48%), Positives = 208/319 (65%), Gaps = 5/319 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + + L Y M IRR E AG LY ++ GFCHL GQEAV VG K +L D + Sbjct: 56 TLTRAEALDMYTQMHTIRRMETSAGNLYKDKIIRGFCHLYAGQEAVAVGFKHALRPQDSV 115 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG GV ++++ELTGR+ G ++GKGGSMHM++ FYGG+GIVGAQV Sbjct: 116 ITAYRAHGWTYVMGVPPIEVLSELTGRRTGCARGKGGSMHMYTK--NFYGGNGIVGAQVP 173 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+A A +Y+ +D +CV +GDGAANQGQV+E +N+A LWN+ I+V ENN Y MGTS Sbjct: 174 LGVGVALAAQYKGTDGVCVALYGDGAANQGQVFEVYNMAKLWNIPCIFVCENNGYGMGTS 233 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RA+A T + RG +PG+ VDGMD+ AV+ AV YC A GPI+IE TYRY Sbjct: 234 AVRAAASTEYYTRGDF--VPGIWVDGMDVLAVRQAARLAVNYCAAGNGPIVIEAQTYRYS 291 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YRTREE+ E+R DPI +++++ + + ++KEI+ +R I+ + Sbjct: 292 GHSMSDPGTSYRTREEVQEVRQTRDPITSFKEKIITSNLVTAEEIKEIDAKIRTEIDEAT 351 Query: 345 EFAQSDKEPDPAELYSDIL 363 + A+++KE E+ SDI Sbjct: 352 KKAKAEKEIGLDEIASDIY 370 >gi|170036247|ref|XP_001845976.1| pyruvate dehydrogenase [Culex quinquefasciatus] gi|167878853|gb|EDS42236.1| pyruvate dehydrogenase [Culex quinquefasciatus] Length = 398 Score = 345 bits (884), Expect = 8e-93, Method: Composition-based stats. Identities = 159/319 (49%), Positives = 211/319 (66%), Gaps = 5/319 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 K++ L Y M IRR E AG LY ++ GFCHL GQEA VGM+ ++ D Sbjct: 55 TVTKDEALRYYGQMYAIRRMETAAGNLYKEKIIRGFCHLYSGQEACAVGMRAAMRPEDSC 114 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG GV ++AELTGRQ G ++GKGGSMHM++ N FYGG+GIVGAQV Sbjct: 115 ITAYRCHGWTYLMGVSMQGVLAELTGRQSGCARGKGGSMHMYT--NNFYGGNGIVGAQVP 172 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY + +C+ +GDGAANQGQ++E +N+A LWN I+V ENN Y MGTS Sbjct: 173 LGVGIAFAAKYNGTKGVCIAAYGDGAANQGQIFEVYNMAKLWNAPCIFVCENNGYGMGTS 232 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RASA N+ RG + +PG+ VDGMD+ AV+ A+ +C + KGPI++E TYRY Sbjct: 233 AERASANVNYYTRGDA--VPGIWVDGMDVLAVREATRFAIEHCNSGKGPILLETATYRYS 290 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YR+R+EI E+R DPI +R+++L N+ A+ +LKEIE +R ++ + Sbjct: 291 GHSMSDPGTSYRSRDEIAEVRQTRDPITSLREKILTNELATTEELKEIESKLRGEVDAAT 350 Query: 345 EFAQSDKEPDPAELYSDIL 363 + A++DKE EL +DI Sbjct: 351 KVAKADKEIAVEELVTDIY 369 >gi|124026413|ref|YP_001015528.1| pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. NATL1A] gi|123961481|gb|ABM76264.1| Pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. NATL1A] Length = 364 Score = 345 bits (884), Expect = 9e-93, Method: Composition-based stats. Identities = 128/328 (39%), Positives = 207/328 (63%), Gaps = 8/328 (2%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TE 101 + ++ N+E L+ ++ M L RRFE+K ++Y G + GF HL GQEA+ G+ ++ + Sbjct: 35 KPAQINREIGLNLFKDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAISTGVIGAMKRK 94 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG+ +G Sbjct: 95 HDWFCSTYRDHVHALSAGVPAKEVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGYAFIG 154 Query: 162 AQVSLGTGIAFANKYRRS------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + + G AF++KY+R D + FGDG N GQ YE N+A LW L +I+V+ Sbjct: 155 EGIPVALGAAFSSKYKREALKESSDSVTAAFFGDGTCNIGQFYECLNMAQLWKLPIIFVV 214 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENN++A+G + RA+++T ++ +F + G ++DGMD+ AV+ ++A+ RA +GP Sbjct: 215 ENNKWAIGMAHDRATSETEIWRKASAFGMHGEEIDGMDVLAVRGAAERALERARAGEGPT 274 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +IE LTYR+RGHS++DP R+ +E E + DPI++++ L + S+ +LK IE Sbjct: 275 LIECLTYRFRGHSLADPDELRSEKE-KEFWAKRDPIKKLKNDLTSSGLVSDEELKNIEKE 333 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDIL 363 + +N++VEFA + EPDP+EL I Sbjct: 334 IDLEVNDAVEFALNAPEPDPSELTKYIW 361 >gi|332020438|gb|EGI60858.1| Putative pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [Acromyrmex echinatior] Length = 396 Score = 345 bits (884), Expect = 9e-93, Method: Composition-based stats. Identities = 158/319 (49%), Positives = 214/319 (67%), Gaps = 5/319 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 ++ + ++ + IRR E AG LY ++ GFCHL GQEA VGMK ++ D + Sbjct: 54 TVTRDDAIELFKQLHTIRRMETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRPQDAV 113 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG G+D + AELTGRQGG +KGKGGSMHM+S FYGG+GIVGAQV Sbjct: 114 ITAYRAHGWTYLMGIDVFGVFAELTGRQGGNAKGKGGSMHMYSK--NFYGGNGIVGAQVP 171 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY + +C+ +GDGAANQGQV+E +NIA LW++ I+V ENN Y MGTS Sbjct: 172 LGVGIAFAQKYLNNGGVCLTLYGDGAANQGQVFEVYNIAKLWDVPCIFVCENNGYGMGTS 231 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V RA+A T + RG +PG+ VDGMD+ AV+ A+ +C + KGPII+E +TYRY Sbjct: 232 VERAAASTEYYTRGDY--VPGIWVDGMDVLAVREATKFAIDHCTSGKGPIIMETVTYRYS 289 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YRTREE+ E+R DP+ ++R+L+ A+ ++K IE +RK +++++ Sbjct: 290 GHSMSDPGTSYRTREEVQEVRQTRDPLTSFKERILNFNLATADEIKAIEGEIRKSVDDAM 349 Query: 345 EFAQSDKEPDPAELYSDIL 363 + A++DKE EL +DI Sbjct: 350 KAAKNDKEIPLNELTADIY 368 >gi|297840565|ref|XP_002888164.1| AT-E1 alpha [Arabidopsis lyrata subsp. lyrata] gi|297334005|gb|EFH64423.1| AT-E1 alpha [Arabidopsis lyrata subsp. lyrata] Length = 389 Score = 345 bits (884), Expect = 9e-93, Method: Composition-based stats. Identities = 160/372 (43%), Positives = 235/372 (63%), Gaps = 11/372 (2%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVD--IPFL-----EGFEVSEFNKEQEL 53 M +++ I + + S + ++ ++ +PF E + ++ L Sbjct: 1 MALSRLTSRSNIITRPFSAAFSRLLSTDTTPITIETSLPFTAHLCDPPSRSVESSSQELL 60 Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 +R M L+RR E A LY ++ GFCHL GQEAV +GM+ ++T+ D +ITAYR+H Sbjct: 61 DFFRTMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKKDAIITAYRDHC 120 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 L G +I +EL GRQ G SKGKGGSMH + ++ FYGGHGIVGAQV LG GIAFA Sbjct: 121 IFLGRGGSLYEIFSELMGRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVPLGCGIAFA 180 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ RAS + Sbjct: 181 QKYNKEEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTAEWRASKSS 240 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP- 292 ++ KRG +PG++VDGMD AVK A + KGPII+EM TYRY GHSMSDP Sbjct: 241 SYYKRGDY--VPGLKVDGMDAFAVKQACKFAKQHA-LEKGPIILEMDTYRYHGHSMSDPG 297 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 + YRTR+EI+ +R DPIE+++K +L + A+E +LK++E +RK +++++ A+ Sbjct: 298 STYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAKDCPM 357 Query: 353 PDPAELYSDILI 364 P+P+EL++++ + Sbjct: 358 PEPSELFTNVYV 369 >gi|229578611|ref|YP_002837009.1| dehydrogenase E1 component [Sulfolobus islandicus Y.G.57.14] gi|229582608|ref|YP_002841007.1| dehydrogenase E1 component [Sulfolobus islandicus Y.N.15.51] gi|284997306|ref|YP_003419073.1| dehydrogenase, E1 component [Sulfolobus islandicus L.D.8.5] gi|228009325|gb|ACP45087.1| dehydrogenase E1 component [Sulfolobus islandicus Y.G.57.14] gi|228013324|gb|ACP49085.1| dehydrogenase E1 component [Sulfolobus islandicus Y.N.15.51] gi|284445201|gb|ADB86703.1| dehydrogenase, E1 component [Sulfolobus islandicus L.D.8.5] Length = 332 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 121/327 (37%), Positives = 185/327 (56%), Gaps = 8/327 (2%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 V + K + L Y+ MLLIR E A +L+ +G + GF HL +G+EAV VG+ +L + D Sbjct: 2 VQDIPKSKLLDMYKKMLLIRYHELTAKELFAIGKIPGFVHLYVGEEAVAVGVMSTLRDDD 61 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A G+D +++AE+ G++ G+ KGKGGSMH+F G G +GIVG Sbjct: 62 YITSTHRGHGHCIAKGLDVKRMLAEIMGKKTGVCKGKGGSMHIFDYSKGMLGANGIVGGG 121 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 G A A K + D++ GDGA NQG V ES N++A+W L V++++E+N YAM Sbjct: 122 APHAVGAALAFKLKGLDRVAAAFIGDGAMNQGVVLESLNLSAIWKLPVVFIVEDNMYAMS 181 Query: 224 TS-------VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 T SA ++ +R + F IP ++VDGMD+ AV +AV R GP + Sbjct: 182 TRSLAPAKLQPSHSAAKSYVERALGFGIPAVEVDGMDVLAVYEVAKEAVDKARKGGGPSL 241 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 + TYR+ GH D YR +EE EM DPI R +L+ N ++ +L +I+ Sbjct: 242 LHCKTYRFFGHFEGDSLVYRDKEE-EEMWRKRDPITLFRDKLVSNDIVNQEELDKIDREA 300 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 + I +++FA+ P+ E +D+ Sbjct: 301 KTEIEQALKFAEESPYPEVEEALTDVF 327 >gi|312142561|ref|YP_003994007.1| Pyruvate dehydrogenase (acetyl-transferring) [Halanaerobium sp. 'sapolanicus'] gi|311903212|gb|ADQ13653.1| Pyruvate dehydrogenase (acetyl-transferring) [Halanaerobium sp. 'sapolanicus'] Length = 320 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 118/318 (37%), Positives = 182/318 (57%), Gaps = 1/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +KE L Y M IR FE+ A +L+ G+V G H+ G+EAV VG +L + D + Sbjct: 2 EKSKETLLDMYEKMYKIRLFEDNAVKLFNQGLVRGPMHVYTGEEAVAVGACSNLNDDDLI 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G K+ AEL + G KGKGGSMH+ G G +GIVGA + Sbjct: 62 TSTHRGHGHCIAKGGRVDKMAAELLAKGTGYCKGKGGSMHIADPDIGILGANGIVGAGLP 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + TG A ++K R +D++ + FGDGA N+G +E+ N+AA+W+L V++V ENN Y + Sbjct: 122 IATGSALSSKMRGTDQVTICFFGDGATNEGAFHEALNMAAIWDLPVVFVCENNLYGLTGP 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + + R S++IPG+ VDG D+ V T+ +A+ + GP +IE TYR + Sbjct: 182 ADEMVSVKDVASRAASYDIPGVVVDGNDVLDVYETVGEAIKRAKNGGGPSLIEAKTYRIK 241 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + DP YR EE+ + PI++ R L+ + +L EIE V+K I +V+ Sbjct: 242 GHFVGDPQVYRDDEEVEKW-KKRCPIKKHRNYLIETVGVASEELAEIEAKVKKEIKEAVK 300 Query: 346 FAQSDKEPDPAELYSDIL 363 FA+ +P+ ++ D+ Sbjct: 301 FAKESPDPEIEVVFEDVF 318 >gi|50293763|ref|XP_449293.1| hypothetical protein [Candida glabrata CBS 138] gi|49528606|emb|CAG62267.1| unnamed protein product [Candida glabrata] Length = 408 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 155/375 (41%), Positives = 224/375 (59%), Gaps = 15/375 (4%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIP--FLEGF--EVSEF----NKEQE 52 + ++ + V MA S + + +P EG+ E K Sbjct: 10 LALSARSVVGIGRTMATAKEKSQPVPDENENVEISLPETSFEGYMLEPPSLNYSATKGSL 69 Query: 53 LSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREH 112 L ++ M++IRR E LY + GFCHL +GQEA+ VG++ ++T+ D +IT+YR H Sbjct: 70 LQMFKDMVIIRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIENAITKRDSVITSYRCH 129 Query: 113 GHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAF 172 G G ++AEL G++ G+S GKGGSMH+F+ GFYGG+GIVGAQV +G G+AF Sbjct: 130 GFTYMRGASVQAVLAELMGKRSGVSFGKGGSMHLFAP--GFYGGNGIVGAQVPVGAGLAF 187 Query: 173 ANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQ 232 A++Y+ D +GDGA+NQGQV+ESFN+A LWNL V++ ENN+Y MGT+ +R+SA Sbjct: 188 AHQYKNEDACSFTLYGDGASNQGQVFESFNMAKLWNLPVVFCCENNKYGMGTAAARSSAM 247 Query: 233 TNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP 292 T + KRG IPG++V+GMDI AV A +C + KGP+++E TYRY GHSMSDP Sbjct: 248 TEYFKRGQY--IPGLKVNGMDILAVYQASKFAKEWCLSGKGPLVLEYETYRYGGHSMSDP 305 Query: 293 -ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDK 351 YRTR+EI MRS +DPI ++ LL A+E ++K + RK ++ VE A Sbjct: 306 GTTYRTRDEIQHMRSKNDPIAGLKMHLLELGIATEEEVKAYDKAARKYVDEQVELADKSA 365 Query: 352 EPD--PAELYSDILI 364 P+ + L+ D+ + Sbjct: 366 PPEAKLSILFEDVYV 380 >gi|308172672|ref|YP_003919377.1| acetoin dehydrogenase E1 component (TPP-dependent subunit alpha) [Bacillus amyloliquefaciens DSM 7] gi|307605536|emb|CBI41907.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus amyloliquefaciens DSM 7] gi|328552440|gb|AEB22932.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus amyloliquefaciens TA208] gi|328910786|gb|AEB62382.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus amyloliquefaciens LL3] Length = 333 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 124/318 (38%), Positives = 183/318 (57%), Gaps = 2/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L Y+ ML IR FE+K +L+ G++ GF HL G+EAV VG+ L +GD + Sbjct: 11 LTEEKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLHDGDSIT 70 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GIVG +L Sbjct: 71 STHRGHGHCIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLNKGMLGANGIVGGGFTL 130 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY++++ + V FGDGA NQG +E N+AA+WNL V++V ENN Y T+ Sbjct: 131 ACGSALTAKYKQTNNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAENNGYGEATTF 190 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ASA + + R ++N+PG++VDG DI AV ++A+ R GP +IE +TYR G Sbjct: 191 EYASACDSIADRAAAYNMPGVKVDGKDILAVYQAAEEAIERARNGGGPSLIECMTYRNYG 250 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D Y+T++E E D I+ + LL L +IE V + I +V F Sbjct: 251 HFEGDAQTYKTKDERTEHIKEKDAIQGFKNYLLKE--TDANKLSDIEQRVSESIEKAVSF 308 Query: 347 AQSDKEPDPAELYSDILI 364 ++ P +EL +D+ + Sbjct: 309 SEDSPYPKESELLTDVYV 326 >gi|13430788|gb|AAK26016.1|AF360306_1 putative pyruvate dehydrogenase e1 alpha subunit [Arabidopsis thaliana] Length = 389 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 157/372 (42%), Positives = 234/372 (62%), Gaps = 11/372 (2%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVD--IPFL-----EGFEVSEFNKEQEL 53 M +++ I + + S + ++ ++ +PF E + ++ L Sbjct: 1 MALSRLSSRSNIITRPFSAAFSRLISTDTTPITIETSLPFTAHLCDPPSRSVESSSQELL 60 Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 +R M L+RR E A LY ++ GFCHL GQEAV +GM+ ++T+ D +ITAYR+H Sbjct: 61 DFFRTMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKKDAIITAYRDHC 120 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 L G ++ +EL GRQ G SKGKGGSMH + ++ FYGGHGIVGAQV LG GIAFA Sbjct: 121 IFLGRGGSLHEVFSELMGRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVPLGCGIAFA 180 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ RA+ Sbjct: 181 QKYNKEEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTAEWRAAKSP 240 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP- 292 ++ KRG +PG++VDGMD AVK A + KGPII+EM TYRY GHSMSDP Sbjct: 241 SYYKRGDY--VPGLKVDGMDAFAVKQACKFAKQHA-LEKGPIILEMDTYRYHGHSMSDPG 297 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 + YRTR+EI+ +R DPIE+++K +L + A+E +LK++E +RK +++++ A+ Sbjct: 298 STYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAKDCPM 357 Query: 353 PDPAELYSDILI 364 P+P++L++++ + Sbjct: 358 PEPSDLFTNVYV 369 >gi|262340886|ref|YP_003283741.1| pyruvate dehydrogenase E1 component subunit alpha [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272223|gb|ACY40131.1| pyruvate dehydrogenase E1 component subunit alpha [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 334 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 134/321 (41%), Positives = 197/321 (61%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EG 102 + E E L ++ M R+FE+K LY + GF HL GQEA+ G+ ++ Sbjct: 1 MKEITTETYLKWFKDMSFWRKFEDKCRSLYLKQKIRGFLHLYNGQEAIPAGLIHAMDMSK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D++ITAYR H ++ GVD K+MAEL G++ G S G GGSMH+FS K+ FYGGHGIVG Sbjct: 61 DKIITAYRCHILPISMGVDPKKVMAELLGKKTGTSHGMGGSMHIFSKKHRFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG GIAF++KY + + GDGA QG ++E+FN+A +W L V+++ ENN+YAM Sbjct: 121 QIPLGAGIAFSDKYFNRKAVTLTLMGDGAVRQGSLHETFNMAMIWKLPVVFICENNKYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R++ K G+S+ +P VDGMD + A+ R +G +++ TY Sbjct: 181 GTSVERSTNVEEIYKIGLSYGMPSNSVDGMDPEKIARAAFIAIERARKGEGATFLDIQTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YR++EE++ DPI +++ ++ NKW + +LK IE V+K + + Sbjct: 241 RYRGHSMSDAESYRSKEEVHSY-KKKDPILKLKNIIIQNKWETIENLKTIENEVKKEVES 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 VEFA+ P E+Y+ + Sbjct: 300 CVEFAEKSDPPSLEEMYNVVY 320 >gi|306825193|ref|ZP_07458535.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432629|gb|EFM35603.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 322 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 122/321 (38%), Positives = 183/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S + L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDINLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMKNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVINVYEGFKKAVDHVRGGNGPVLIESITY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|211906500|gb|ACJ11743.1| pyruvate dehydrogenase alpha subunit [Gossypium hirsutum] Length = 394 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 155/319 (48%), Positives = 217/319 (68%), Gaps = 4/319 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E N ++ L+ +R M L+RR E A LY ++ GFCHL GQEAV VGM+ ++T+ D + Sbjct: 58 ETNPKELLTFFRDMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCI 117 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H ++ G ++ AEL GRQ G SKGKGGSMH + + FYGGHGIVGAQV Sbjct: 118 ITAYRDHCTFVSRGGTLLEVFAELMGRQAGCSKGKGGSMHFYKKDSNFYGGHGIVGAQVP 177 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ Sbjct: 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTA 237 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RA+ + KRG +PG++VDGMD AVK A + + GPII+EM TYRY Sbjct: 238 EWRAAKSPAYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKN-GPIILEMDTYRYH 294 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP + YRTR+EI+ +R DPIE++RK +L + A+E +LK++E VRK +++++ Sbjct: 295 GHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILSHDLATEKELKDVEKEVRKEVDDAI 354 Query: 345 EFAQSDKEPDPAELYSDIL 363 A+ P+P+EL++++ Sbjct: 355 AQAKESPMPEPSELFTNVY 373 >gi|225443286|ref|XP_002274285.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|147810628|emb|CAN74103.1| hypothetical protein VITISV_035154 [Vitis vinifera] Length = 398 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 153/320 (47%), Positives = 214/320 (66%), Gaps = 4/320 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E ++ L +R M L+RR E + LY ++ GFCHL GQEAV VGM+ ++T D + Sbjct: 62 ETTPKEVLGFFRDMALMRRMEIASDSLYKSKLIRGFCHLYDGQEAVAVGMEAAITRRDCI 121 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR+H L G + +EL GRQ G SKGKGGSMH + +NGFYGGHGIVGAQ+ Sbjct: 122 ITAYRDHCIYLGRGGTLFECFSELMGRQSGCSKGKGGSMHFYKKENGFYGGHGIVGAQIP 181 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+AFA KY + + + +GDGAANQGQ++E+ N+AALW+L I V ENN Y MGT+ Sbjct: 182 LGCGLAFAQKYSKDETVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTA 241 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RA+ + KRG +PG++VDGMD+ AVK A + + GPII+EM TYRY Sbjct: 242 EWRAAKSPAYYKRGDY--VPGLKVDGMDVLAVKQACRFAKEHALKN-GPIILEMDTYRYH 298 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP + YRTR+EI+ +R D IE+VRK +L ++ ++E +LK IE +R +++++ Sbjct: 299 GHSMSDPGSTYRTRDEISGVRQERDAIERVRKLILSHELSTEAELKSIEKEIRGQVDDAI 358 Query: 345 EFAQSDKEPDPAELYSDILI 364 A+ PDP+EL++++ + Sbjct: 359 ARAKESPMPDPSELFTNVYV 378 >gi|327194492|gb|EGE61352.1| acetoin dehydrogenase TPP-dependent subunit alpha [Rhizobium etli CNPAF512] Length = 343 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 130/337 (38%), Positives = 194/337 (57%), Gaps = 4/337 (1%) Query: 27 ATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCI 86 A S + ++PF+ ++ ++Q L A R M LIRRFEE A + Y G++ G HL I Sbjct: 7 AMKSAETSNLPFI----YRQYTRDQLLDALRKMHLIRRFEEGAEESYTRGLIHGTMHLSI 62 Query: 87 GQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHM 146 GQEA +G+ + LT+ DQ+ + +R HGH +A G D ++ AE G+ G G+GGSMH+ Sbjct: 63 GQEASAMGVCLPLTQEDQITSTHRGHGHCIAKGADVKRMFAEFFGKTTGYCAGRGGSMHI 122 Query: 147 FSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAAL 206 G G +GIVG + + G A +K ++ K+ V FGDGA N+G +E+ N+AA+ Sbjct: 123 ADVTTGNLGANGIVGGGLPIAVGAALTSKRLKTGKVVVCFFGDGANNEGAFHEALNMAAV 182 Query: 207 WNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVA 266 W L VI+V ENN Y M TS +R++A N + R ++++PG+ VDG + V AV Sbjct: 183 WKLPVIFVCENNGYGMSTSTARSTAVANIADRAAAYSMPGVIVDGNVLSEVAEATHNAVE 242 Query: 267 YCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASE 326 + +GP +IE TYRYRGHS SD YRT++EI + SN DPI + L A++ Sbjct: 243 RAKRGEGPSLIECKTYRYRGHSKSDRNRYRTKDEIEDWMSNRDPIARFETELREFGVAND 302 Query: 327 GDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +L I +V I +EFA+ P+ + L ++ Sbjct: 303 TELAAIRKSVEDEIAAGIEFAKQSPMPEISGLADNVY 339 >gi|153792309|ref|NP_001093304.1| pyruvate dehydrogenase [Bombyx mori] gi|146738085|gb|ABQ42597.1| L(B002) [Bombyx mori] Length = 399 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 156/366 (42%), Positives = 229/366 (62%), Gaps = 8/366 (2%) Query: 2 YVAKQDVT-VGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEV--SEFNKEQELSAYRL 58 ++A +T V +A N S K+ AT + + L+ + E L Y Sbjct: 11 FLAGNTITKVTAPVVATNAKYSTKKEATFEIKPYKLHKLDQGPATSATLTSEDALKLYEQ 70 Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 + ++RR E +G LY ++ GFCHL GQEAV VGM+ ++ + D +ITAYR HG Sbjct: 71 LTILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRDADSVITAYRCHGWTYLM 130 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 GV +++ELTGR+ G S+GKGGSMH++ FYGG+GIVGAQV LG G+AFA+KYR Sbjct: 131 GVSVLGVLSELTGRRTGCSRGKGGSMHLYGR--NFYGGNGIVGAQVPLGAGVAFAHKYRA 188 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + +GDGAANQGQ++E++N++ LW+L ++V ENN Y MGTSV R+SA T + R Sbjct: 189 DGGVTFALYGDGAANQGQLFEAYNMSKLWDLPCVFVCENNGYGMGTSVDRSSASTEYYTR 248 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRT 297 G +PG+ VDGMD+ A + A+ YC A KGP+++EM TYRY GHSMSDP YRT Sbjct: 249 GDY--VPGVWVDGMDVLATREAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRT 306 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE 357 R+E+ E+R DPI ++++L+++ + LK+I+ VRK ++ + + ++++ E E Sbjct: 307 RDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEE 366 Query: 358 LYSDIL 363 L +DI Sbjct: 367 LSADIY 372 >gi|119492641|ref|ZP_01623820.1| Dehydrogenase, E1 component [Lyngbya sp. PCC 8106] gi|119452979|gb|EAW34150.1| Dehydrogenase, E1 component [Lyngbya sp. PCC 8106] Length = 346 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 143/336 (42%), Positives = 209/336 (62%), Gaps = 10/336 (2%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 +P E + + E+ L+ Y M+L R FE+K ++Y G + GF HL GQEAV G+ Sbjct: 9 LPTFEA-DHANITHEEGLTLYEDMVLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVSSGI 67 Query: 96 KMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 ++ G D + + YR+H H L+ GV A ++MAEL G++ G SKG+GGSMHMFS ++ Sbjct: 68 IKAMRPGEDFVCSTYRDHVHALSAGVPAREVMAELFGKETGCSKGRGGSMHMFSAQHKLL 127 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALW 207 GG V + + TG AF KYRR D++ FGDGA N GQ YE N+A LW Sbjct: 128 GGFAFVAEGIPVATGAAFQTKYRREALGDENADQVTACFFGDGACNNGQFYECLNMATLW 187 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 L +I+V+ENN++A+G + RA++ K+G +F +PG +VDGMDI AV +AVA Sbjct: 188 KLPIIFVVENNKWAIGMAHERATSDPEIYKKGPAFGMPGYEVDGMDILAVHTLAKEAVAR 247 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 RA +GP +IE LTYR+RGHS++DP R +EE + + DPI+++ L+ AS Sbjct: 248 ARAGEGPTLIEALTYRFRGHSLADPDELRDQEE-KDFWFSRDPIKKLANYLIEKNLASAE 306 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 LKEI+ ++ +++++VEFA+S EPDP+ELY + Sbjct: 307 QLKEIDHKIQAVVDDAVEFAESSSEPDPSELYRFVF 342 >gi|12839413|dbj|BAB24543.1| unnamed protein product [Mus musculus] Length = 391 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 159/347 (45%), Positives = 229/347 (65%), Gaps = 7/347 (2%) Query: 20 SVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGM 77 S+ AT + D+ LE G S + + L YR M +IRR E KA QLY Sbjct: 28 SLKFSNDATCDIKKCDLYRLEEGPPTSTVLTRAEALKYYRTMQVIRRMELKADQLYKQKF 87 Query: 78 VGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGIS 137 + GFCHLC GQEA VG++ + D +IT+YR HG G+ I+AEL GR+GG + Sbjct: 88 IRGFCHLCDGQEACCVGLEAGINPTDHVITSYRAHGFCYTRGLSVKSILAELNGRKGGCA 147 Query: 138 KGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQV 197 KGKGGSMHM+ FYGG+GIVGAQV LG G+AFA KY ++ ++C+ +GDGAANQGQV Sbjct: 148 KGKGGSMHMYGK--NFYGGNGIVGAQVPLGAGVAFACKYLKNGQVCLALYGDGAANQGQV 205 Query: 198 YESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAV 257 +E++N++ALW L +++ ENN Y MGTS R++A T++ K F IPG++V+GMDI V Sbjct: 206 FEAYNMSALWKLPCVFICENNLYGMGTSNERSAASTDYHK--KGFIIPGLRVNGMDILCV 263 Query: 258 KATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRK 316 + A +CR+ KGPI++E+ TYRY GHSMSDP +YR+REE++ +RS DPI +R+ Sbjct: 264 REATKFAADHCRSGKGPIVMELQTYRYHGHSMSDPGISYRSREEVHNVRSKSDPIMLLRE 323 Query: 317 RLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R++ N ++ +LKEI+ +V+K + ++ +FA +D EP ++ + + Sbjct: 324 RIISNNLSNIEELKEIDADVKKEVEDAAQFATTDPEPAVEDIANYLY 370 >gi|195131189|ref|XP_002010033.1| GI14910 [Drosophila mojavensis] gi|193908483|gb|EDW07350.1| GI14910 [Drosophila mojavensis] Length = 399 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 153/344 (44%), Positives = 216/344 (62%), Gaps = 12/344 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF EG E + + K++ L Y M IRR E AG LY ++ G Sbjct: 34 ATEATVQVNRPFKLHRLEEGPETTVKLTKDEALKYYTQMQTIRRIETAAGNLYKEKIIRG 93 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV ++ ELTG Q G ++GK Sbjct: 94 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVPPLGVLGELTGVQSGCARGK 153 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+ F+GG+GIVGAQV LG G+A A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 154 GGSMHMYCP--NFFGGNGIVGAQVPLGAGVALACKYKGNGGMCLALYGDGAANQGQVFEA 211 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 212 YNMAYLWKLPVIFVCENNNYGMGTSAERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 269 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y +GP+++E TYRY GHSMSDP YRTREEI E+R DPI ++ + Sbjct: 270 TEFAIKYV-NEQGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 328 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + ++K I++ VRK ++ + A++ E + L++D+ Sbjct: 329 ELGLITTDEVKAIDLKVRKEVDEATAQAKNGTELPVSHLWTDVY 372 >gi|307719638|ref|YP_003875170.1| pyruvate dehydrogenase E1 component subunit alpha [Spirochaeta thermophila DSM 6192] gi|306533363|gb|ADN02897.1| pyruvate dehydrogenase E1 component, subunit alpha [Spirochaeta thermophila DSM 6192] Length = 338 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 149/317 (47%), Positives = 210/317 (66%), Gaps = 3/317 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMI 106 +++ + R MLLIR FEEKA Q+YG+ +GGFCHL IGQEAV VG ++ D ++ Sbjct: 15 DRDLYMKFLREMLLIRLFEEKAAQMYGLRKIGGFCHLYIGQEAVAVGSIAAIDLSKDYVV 74 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR+HGH LACG+D +MAEL G+ G S+GKGGSMHMF + F GG+GIVGAQ+ + Sbjct: 75 TAYRDHGHALACGMDPKVVMAELFGKVTGCSRGKGGSMHMFDVEKHFLGGNGIVGAQIPV 134 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 GTG+AFA KY+ + + +V FGDGA +QG +E+ N+A +W L V+YV ENNQ+ MGT Sbjct: 135 GTGVAFAQKYQGTGGVTLVYFGDGAIHQGAFHEALNMAKIWELPVVYVCENNQWGMGTFW 194 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 + SA + K G +++IPG+QVDGMD+RAV +AV+ R + P++IE TYRY+G Sbjct: 195 KKVSAVADLYKLGAAYDIPGVQVDGMDVRAVYEATGEAVSRAREGQ-PVLIEARTYRYKG 253 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTREE+ E DPI +++ + E + + +++ + +V F Sbjct: 254 HSMSDPAKYRTREELEEY-KRQDPIGRLKTFMEEEGLLDEETFRSLYDEIQREVEEAVAF 312 Query: 347 AQSDKEPDPAELYSDIL 363 A+ +EP +Y D+ Sbjct: 313 AEQSEEPALHTMYEDVY 329 >gi|16077873|ref|NP_388687.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. subtilis str. 168] gi|221308642|ref|ZP_03590489.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. subtilis str. 168] gi|221312966|ref|ZP_03594771.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317892|ref|ZP_03599186.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. subtilis str. JH642] gi|221322165|ref|ZP_03603459.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. subtilis str. SMY] gi|81637507|sp|O31404|ACOA_BACSU RecName: Full=Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha; Short=Acetoin:DCPIP oxidoreductase-alpha; Short=Ao:DCPIP OR; AltName: Full=TPP-dependent acetoin dehydrogenase E1 subunit alpha gi|2633130|emb|CAB12635.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. subtilis str. 168] gi|2780395|dbj|BAA24296.1| YfjK [Bacillus subtilis] gi|2957146|gb|AAC05582.1| TPP-dependent acetoin dehydrogenase, E1 alpha-subunit [Bacillus subtilis subsp. subtilis str. 168] gi|291483247|dbj|BAI84322.1| acetoin dehydrogenase E1 component TPP-dependent alpha subunit [Bacillus subtilis subsp. natto BEST195] Length = 333 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 124/318 (38%), Positives = 180/318 (56%), Gaps = 2/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L Y+ ML IR FE+K +L+ G++ GF HL G+EAV VG+ L +GD + Sbjct: 11 LTEEKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLHDGDSIT 70 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GIVG +L Sbjct: 71 STHRGHGHCIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFTL 130 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+++ + V FGDGA NQG +E N+AA+WNL V++V ENN Y T Sbjct: 131 ACGSALTAKYKQTKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAENNGYGEATPF 190 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ASA + + R ++N+PG+ VDG DI AV ++A+ R GP +IE +TYR G Sbjct: 191 EYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAIERARNGGGPSLIECMTYRNYG 250 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D Y+T++E E D I+ + LL L +IE V + I +V F Sbjct: 251 HFEGDAQTYKTKDERVEHLEEKDAIQGFKNYLLKE--TDANKLSDIEQRVSESIEKAVSF 308 Query: 347 AQSDKEPDPAELYSDILI 364 ++ P +EL +D+ + Sbjct: 309 SEDSPYPKDSELLTDVYV 326 >gi|296331899|ref|ZP_06874364.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673511|ref|YP_003865183.1| acetoin dehydrogenase E1 component TPP-dependent alpha subunit [Bacillus subtilis subsp. spizizenii str. W23] gi|296150977|gb|EFG91861.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411755|gb|ADM36874.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis subsp. spizizenii str. W23] Length = 333 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 124/318 (38%), Positives = 180/318 (56%), Gaps = 2/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L Y+ ML IR FE+K +L+ G++ GF HL G+EAV VG+ L +GD + Sbjct: 11 LTEEKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLHDGDSIT 70 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GIVG +L Sbjct: 71 STHRGHGHCIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFTL 130 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+++ + V FGDGA NQG +E N+AA+WNL V++V ENN Y T Sbjct: 131 ACGSALTAKYKQTKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAENNGYGEATPF 190 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ASA + + R ++N+PG+ VDG DI AV ++A+ R GP +IE +TYR G Sbjct: 191 EYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAIERARNGGGPSLIECMTYRNYG 250 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D Y+T++E E D I+ + LL L +IE V K I +V F Sbjct: 251 HFEGDAQTYKTKDERAEHLEEKDAIQGFKNYLLKE--TDANRLSDIEQRVSKSIEKAVSF 308 Query: 347 AQSDKEPDPAELYSDILI 364 ++ P ++L +D+ + Sbjct: 309 SEDSPYPKESDLLTDVYV 326 >gi|195044091|ref|XP_001991752.1| GH12828 [Drosophila grimshawi] gi|193901510|gb|EDW00377.1| GH12828 [Drosophila grimshawi] Length = 399 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 157/344 (45%), Positives = 218/344 (63%), Gaps = 12/344 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF EG E++ + KE+ L Y M IRR E AG LY ++ G Sbjct: 34 ATEATVQVNRPFKLHRLDEGPEMTVQLTKEEALKYYTQMQTIRRIETSAGNLYKEKIIRG 93 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV ++AELTG + G ++GK Sbjct: 94 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPLGVLAELTGMKSGCARGK 153 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+S FYGG+GIVGAQV LG G+ A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 154 GGSMHMYSP--NFYGGNGIVGAQVPLGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEA 211 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 212 YNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 269 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y GP+++E TYRY GHSMSDP YRTREEI E+R DPI ++ + Sbjct: 270 TEFAIKYV-NTHGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 328 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + ++K I++ VRK ++ + A+SD E + L++D+ Sbjct: 329 ELGLITTDEVKAIDLKVRKEVDEATALAKSDTELPLSHLWTDVY 372 >gi|218897798|ref|YP_002446209.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus G9842] gi|228965715|ref|ZP_04126795.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar sotto str. T04001] gi|218545397|gb|ACK97791.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus G9842] gi|228793974|gb|EEM41497.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar sotto str. T04001] Length = 332 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 184/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y+ ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYKKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIANRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+E Sbjct: 251 GHFEGEAQTYKTTEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ PD EL D+ + Sbjct: 311 FSENSPYPDDEELLKDVYV 329 >gi|72382694|ref|YP_292049.1| pyruvate dehydrogenase E1 subunit alpha [Prochlorococcus marinus str. NATL2A] gi|72002544|gb|AAZ58346.1| pyruvate dehydrogenase (lipoamide) [Prochlorococcus marinus str. NATL2A] Length = 364 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 128/328 (39%), Positives = 206/328 (62%), Gaps = 8/328 (2%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL-TE 101 + ++ N+E L+ ++ M L RRFE+K ++Y G + GF HL GQEA+ G+ ++ + Sbjct: 35 KPAQINREIGLNLFKDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAISTGVIGAMKRK 94 Query: 102 GDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVG 161 D + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ GG+ +G Sbjct: 95 HDWFCSTYRDHVHALSAGVPAKEVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGYAFIG 154 Query: 162 AQVSLGTGIAFANKYRRS------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVI 215 + + G AF++KY+R D + FGDG N GQ YE N+A LW L +I+V+ Sbjct: 155 EGIPVALGAAFSSKYKREALKENSDSVTAAFFGDGTCNIGQFYECLNMAQLWKLPIIFVV 214 Query: 216 ENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 ENN++A+G + RA+++T ++ +F +PG ++DGMD+ AV+ ++A+ RA +GP Sbjct: 215 ENNKWAIGMAHDRATSETEIWRKASAFGMPGEEIDGMDVLAVRGAAERALERARAGEGPT 274 Query: 276 IIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMN 335 +IE LTYR+RGHS++DP R+ E E + DPI++++ L + + +LK IE Sbjct: 275 LIECLTYRFRGHSLADPDELRSERE-KEFWAKRDPIKKLKNDLTSSGLVFDEELKNIEKE 333 Query: 336 VRKIINNSVEFAQSDKEPDPAELYSDIL 363 + +N++VEFA + EPDP+EL I Sbjct: 334 IDLEVNDAVEFALNAPEPDPSELTKYIW 361 >gi|157149908|ref|YP_001450422.1| acetoin dehydrogenase [Streptococcus gordonii str. Challis substr. CH1] gi|157074702|gb|ABV09385.1| acetoin dehydrogenase [Streptococcus gordonii str. Challis substr. CH1] Length = 322 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 122/321 (38%), Positives = 182/321 (56%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MATLDKSLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNADD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + +++ KI V FGDGA N+G +E+ N+A++W L VI+ NN Y + Sbjct: 121 MGIAVGAALTQQMQKTGKIVVCFFGDGATNEGVFHEAVNMASIWKLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHHRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ I Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLIENNIASAEELEEIQAQVKEAIEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|158290247|ref|XP_311846.4| AGAP003030-PA [Anopheles gambiae str. PEST] gi|157017802|gb|EAA07828.4| AGAP003030-PA [Anopheles gambiae str. PEST] Length = 393 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 147/357 (41%), Positives = 216/357 (60%), Gaps = 7/357 (1%) Query: 9 TVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS-EFNKEQELSAYRLMLLIRRFEE 67 + + A + ++S EG + + K++ + YR M IRR E Sbjct: 14 RIVLFSPPTKYAKFADKRSSSLQPFKLHNLKEGPPTTGKVTKDEAVKYYRQMQTIRRLET 73 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 AG LY +V GFCHL GQEA VGMK ++ D +I+AYR HG GV ++ Sbjct: 74 SAGNLYKEKLVRGFCHLYSGQEACAVGMKGAMRPQDNIISAYRVHGWTYLMGVSPQGVLC 133 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 EL G+QGG ++GKGGSMHM++ FYGG+GIVGAQV LG G+A A KY+ ++ +C+ + Sbjct: 134 ELAGKQGGCARGKGGSMHMYAP--NFYGGNGIVGAQVPLGAGVALACKYKGNEGVCLALY 191 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGAANQGQ++E++N+A LW L I+V ENN Y MGTS R S N+ +RG +PG+ Sbjct: 192 GDGAANQGQIFEAYNMAHLWKLPCIFVCENNGYGMGTSAERGSCNVNYYQRGDV--LPGI 249 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRS 306 VDGMD+ AV+ + A+ + + GP+++E+ TYRY GHSMSDP YRTREE+ E+R Sbjct: 250 WVDGMDVVAVRLATEFAINHV-LNVGPVVMEVYTYRYSGHSMSDPGTSYRTREEVQEVRQ 308 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DPI + ++L + +LK ++ ++K ++ + + A++D E EL +D+ Sbjct: 309 TRDPISSFKDKILAAGLVTADELKAMDNQIKKEVDEATKQAKADAEIGLPELSTDVY 365 >gi|296235076|ref|XP_002762742.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform 2 [Callithrix jacchus] Length = 401 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 181/381 (47%), Positives = 238/381 (62%), Gaps = 22/381 (5%) Query: 1 MYVAKQDVTVG----DIKMALNPSVSAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELS 54 M A V G L S + AT + D+ LE G V+ +E L Sbjct: 4 MLAAVSRVLSGASQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLK 63 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQE-----------AVIVGMKMSLTEGD 103 YR+M +RR E KA QLY ++ GFCHLC GQ A VG++ + D Sbjct: 64 YYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQVGGRFVIELCYLACCVGLEAGINPTD 123 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +ITAYR HG G+ +I+AELTGR+GG +KGKGGSMHM+ FYGG+GIVGAQ Sbjct: 124 HLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMY--AKNFYGGNGIVGAQ 181 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 V LG GIA A KY D++C+ +GDGAANQGQ++E++N+AALW L I++ ENN+Y MG Sbjct: 182 VPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMG 241 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TSV RA+A T++ KRG IPG++VDGMDI V+ A AYCR+ KGPI++E+ TYR Sbjct: 242 TSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYR 299 Query: 284 YRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 Y GHSMSDP +YRTREEI E+RS DPI ++ R++++ AS +LKEI++ VRK I + Sbjct: 300 YHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIED 359 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 + +FA +D EP EL I Sbjct: 360 AAQFATADPEPPLEELGYHIY 380 >gi|315186557|gb|EFU20316.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Spirochaeta thermophila DSM 6578] Length = 340 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 149/316 (47%), Positives = 209/316 (66%), Gaps = 3/316 (0%) Query: 49 KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMIT 107 ++ + R MLLIR FEEK+ Q+YG+ +GGFCHL IGQEAV VG ++ D ++T Sbjct: 18 RDLYMKFLREMLLIRVFEEKSAQMYGLRKIGGFCHLYIGQEAVAVGSIAAIDLAKDYVVT 77 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR+HGH LACG+D +MAEL G+ G S+GKGGSMHMF + F GG+GIVGAQ+ +G Sbjct: 78 AYRDHGHALACGMDPKVVMAELFGKVTGCSRGKGGSMHMFDVEKHFLGGNGIVGAQIPVG 137 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 TG+AFA KY + + +V FGDGA +QG +E+ N+A +W L V+Y+ ENNQ+ MGT Sbjct: 138 TGVAFAQKYEGTGGVTLVYFGDGAIHQGAFHEALNLAKIWELPVVYICENNQWGMGTFWK 197 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 + SA + K G +++IPG+QVDGMD+RAV +AV+ R P++IE TYRY+GH Sbjct: 198 KVSAVADLYKLGAAYDIPGVQVDGMDVRAVYEATTEAVSRAREGD-PVLIEARTYRYKGH 256 Query: 288 SMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFA 347 SMSDPA YRTREE+ E DPI +++ + E + + ++K ++ +VEFA Sbjct: 257 SMSDPAKYRTREELEEY-KRQDPIGRLKTFMEEEGLLEEKTFRALYEEIQKEVDEAVEFA 315 Query: 348 QSDKEPDPAELYSDIL 363 + +EP +Y D+ Sbjct: 316 ERSEEPALHTIYEDVY 331 >gi|270292748|ref|ZP_06198959.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. M143] gi|270278727|gb|EFA24573.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. M143] Length = 322 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 122/321 (38%), Positives = 182/321 (56%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQHTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHHRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENTIASAEELEEIQAQVKEAVET 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|325094767|gb|EGC48077.1| pyruvate dehydrogenase E1 component alpha subunit [Ajellomyces capsulatus H88] Length = 405 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 162/369 (43%), Positives = 226/369 (61%), Gaps = 14/369 (3%) Query: 5 KQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAYRL 58 + D A ++ A+ +V D F E +E+ E K++ YR Sbjct: 23 VRRSVTTDAASAHAEAIPAEEDKPFTVKLSDESF-ETYELDPPPYTLETTKQELKQMYRD 81 Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ IRR E A +LY + GFCHL GQEAV G++ ++T+ D++ITAYR HG L Sbjct: 82 MVSIRRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAITKDDKLITAYRCHGFALLR 141 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G I+ EL GR+ GI+ GKGGSMHMF FYGG+GIVGAQV +G G+AFA +Y Sbjct: 142 GGTVKSIIGELLGRREGIAYGKGGSMHMF--AKNFYGGNGIVGAQVPVGAGLAFAQQYND 199 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + +GDGA+NQGQV+E+FN+A LWNL I+ ENN+Y MGT+ +RA+A T++ KR Sbjct: 200 EKTTTIALYGDGASNQGQVFEAFNMAKLWNLPCIFGCENNKYGMGTAANRAAALTDYYKR 259 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRT 297 G IPG++++GMD+ A+KA + Y + KGP++ E +TYRY GHSMSDP YRT Sbjct: 260 GQY--IPGLKINGMDVLAIKAAVQYGREYTTSGKGPLVFEYVTYRYGGHSMSDPGTTYRT 317 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--P 355 REEI MRS +DPI ++++LL SE +LK I+ + RK +++ V A+ EPD P Sbjct: 318 REEIQRMRSTNDPIAGLKQKLLDWGVTSEEELKAIDKDARKYVDDEVAEAELMTEPDATP 377 Query: 356 AELYSDILI 364 L+ D + Sbjct: 378 RILFEDTYV 386 >gi|209527802|ref|ZP_03276294.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Arthrospira maxima CS-328] gi|209491754|gb|EDZ92117.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Arthrospira maxima CS-328] Length = 343 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 142/325 (43%), Positives = 201/325 (61%), Gaps = 9/325 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 +E+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ S+ + D + Sbjct: 17 ITREEGLMLYEDMVLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIRSMRRDQDFV 76 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS+++ GG V + Sbjct: 77 CSTYRDHVHALSAGVTAREVMAELFGKATGCSKGRGGSMHMFSSQHNLLGGFAFVAEGIP 136 Query: 166 LGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + TG AF +KYRR D + FGDGA N GQ YE N+A LW L +++V+ENN Sbjct: 137 VATGAAFQSKYRREVMGDESSDTVTACFFGDGACNNGQFYECLNMATLWKLPILFVVENN 196 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 ++A+G + RA++ K+G +F +PG +VDGMD+ AV+ KA+A RA +GP +IE Sbjct: 197 KWAIGMAHERATSDPEIYKKGPAFGMPGYEVDGMDVLAVREVAQKAIARARAGEGPTLIE 256 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 LTYR+RGHS++DP R R+E E DPI + L + A +LK I+ V+ Sbjct: 257 ALTYRFRGHSLADPDELRDRDE-KEFWFARDPINKFFAYLTEHNLADSDELKAIDKKVQD 315 Query: 339 IINNSVEFAQSDKEPDPAELYSDIL 363 +IN++VEFAQ+ EPDP+ELY I Sbjct: 316 LINDAVEFAQTSPEPDPSELYRYIY 340 >gi|1709453|sp|P52903|ODPA_SOLTU RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|473169|emb|CAA81558.1| E1 alpha subunit of pyruvate dehydrogenase precursor [Solanum tuberosum] Length = 391 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 157/374 (41%), Positives = 232/374 (62%), Gaps = 13/374 (3%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCV----DIPFL-----EGFEVSEFNKEQ 51 M ++ +K + +R ++ S + +PF E + ++ Sbjct: 1 MALSTSRAINHIMKPLSAAVCATRRLSSDSTATITVETSLPFTSHNIDPPSRSVETSPKE 60 Query: 52 ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 ++ ++ M +RR E A LY ++ GFCHL GQEAV VGM+ ++T+ D +ITAYR+ Sbjct: 61 LMTFFKDMTEMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCIITAYRD 120 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 H L G + AEL GR+ G S+GKGGSMH + ++GFYGGHGIVGAQV LG G+A Sbjct: 121 HCIFLGRGGTLVEAFAELMGRRDGCSRGKGGSMHFYKKESGFYGGHGIVGAQVPLGIGLA 180 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 FA KY++ D + +GDGAANQGQ++E+ N+AALW+L I V ENN Y MGT+ RA+ Sbjct: 181 FAQKYKKEDYVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAK 240 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + KRG +PG++VDGMD+ AVK A + + GPII+EM TYRY GHSMSD Sbjct: 241 SPAYYKRGDY--VPGLRVDGMDVFAVKQACTFAKQHALKN-GPIILEMDTYRYHGHSMSD 297 Query: 292 P-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 P + YRTR+EI+ +R DP+E++R +L + A+E +LK+IE RK+++ ++ A+ Sbjct: 298 PGSTYRTRDEISGVRQERDPVERIRSLILAHNIATEAELKDIEKENRKVVDEAIAKAKES 357 Query: 351 KEPDPAELYSDILI 364 PDP+EL++++ + Sbjct: 358 PMPDPSELFTNVYV 371 >gi|24639744|ref|NP_726946.1| lethal (1) G0334, isoform D [Drosophila melanogaster] gi|28571106|ref|NP_572181.4| lethal (1) G0334, isoform A [Drosophila melanogaster] gi|7290524|gb|AAF45976.1| lethal (1) G0334, isoform A [Drosophila melanogaster] gi|22831701|gb|AAN09129.1| lethal (1) G0334, isoform D [Drosophila melanogaster] gi|317008641|gb|ADU79248.1| GM13002p [Drosophila melanogaster] Length = 399 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 159/344 (46%), Positives = 218/344 (63%), Gaps = 12/344 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF EG + K+Q L Y M IRR E AG LY ++ G Sbjct: 34 ATEATVQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLETAAGNLYKEKIIRG 93 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV S ++AELTG QGG ++GK Sbjct: 94 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPSGVLAELTGVQGGCARGK 153 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM++ FYGG+GIVGAQV LG G+ A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 154 GGSMHMYAP--NFYGGNGIVGAQVPLGAGVGLACKYKGNGGMCLALYGDGAANQGQVFEA 211 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 212 YNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 269 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y GP+++E TYRY GHSMSDP YRTREEI E+R DPI ++ + Sbjct: 270 TEFAINYV-NTHGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 328 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + ++K I++ VRK ++ + FA+SD E + L++D+ Sbjct: 329 ELGLITTDEVKAIDLKVRKEVDEATAFAKSDAELGVSHLWTDVY 372 >gi|15613339|ref|NP_241642.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Bacillus halodurans C-125] gi|10173390|dbj|BAB04495.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Bacillus halodurans C-125] Length = 326 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 126/319 (39%), Positives = 189/319 (59%), Gaps = 1/319 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +++ + ++ M LIR FEEK + + GM+ G HL +GQEA VG L E D+ Sbjct: 8 AQMTEKKLVDLFKQMWLIRYFEEKVDEFFAKGMIHGTTHLAVGQEASAVGSIAVLEERDK 67 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH +A G D +++MAEL GR+ G KGKGGSMH+ + G G +GIVG Sbjct: 68 LTSTHRGHGHCIAKGADVNRMMAELFGRETGYCKGKGGSMHIADVERGNLGANGIVGGGF 127 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 S+ TG A +K ++ + + FGDGA+N+G +E+ N+A++W L V+++ ENNQY M Sbjct: 128 SIATGAALTSKMKKEGYVVLCFFGDGASNEGSFHEAVNLASIWKLPVVFICENNQYGMSG 187 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV + S R + IPGM VDG D+ AV + +AV R +GP I+E TYR+ Sbjct: 188 SVKEMINIEHISDRAAGYGIPGMVVDGNDVFAVMNVVGRAVDRARRGEGPTIVEAKTYRW 247 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +GHS SD YRTREE E DPI ++R L+ +E + I+ ++ I +SV Sbjct: 248 KGHSKSDAKKYRTREEEKEW-REKDPIARLRATLVKEGIVTEEEADSIQEEAKQKIEDSV 306 Query: 345 EFAQSDKEPDPAELYSDIL 363 +FA++ EP+ L D+ Sbjct: 307 QFARNSPEPEIESLLEDVY 325 >gi|226480710|emb|CAX73452.1| pyruvate dehydrogenase E1 alpha 1 [Schistosoma japonicum] Length = 392 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 161/345 (46%), Positives = 210/345 (60%), Gaps = 6/345 (1%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 S S+ R S + E +E ++ L + IRR E G LY + Sbjct: 28 SESSARFTLSDYKVFKLDTTPAQE-TECTRDDALKYLETLHCIRRMETALGNLYKEKHIR 86 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFC L GQEAV VG++ +L GD +ITAYR HG + GV I+AEL G++ G +KG Sbjct: 87 GFCRLYSGQEAVAVGIEAALQPGDTIITAYRCHGFTMTRGVPVHDIVAELAGKKTGCTKG 146 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 GGSMH+++ FYGG+GIVGAQV LG GIA KYR + V +GDGAANQGQV+E Sbjct: 147 VGGSMHLYAKD--FYGGNGIVGAQVPLGVGIALRMKYRGEKSVSVTLYGDGAANQGQVFE 204 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 +FN+A LWNL VI++ ENN+Y MGTSV RASA TN+ RG IPG+ VDGMD+ V+ Sbjct: 205 AFNMAKLWNLPVIFICENNKYGMGTSVDRASANTNYYTRGDY--IPGLWVDGMDVLTVRE 262 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRL 318 A +CR+ KGPI++E TYRY GHSMSDP YRTREE+ MR DPI +K + Sbjct: 263 ATRFAADWCRSDKGPILLETETYRYHGHSMSDPGTSYRTREEVQSMRRGRDPIALFQKSI 322 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + N ++ + KEIE VR ++ VE A +D EP ++ +I Sbjct: 323 IDNGLCTQDEAKEIEKRVRTEVDKDVEKALNDSEPPLETMFGNIY 367 >gi|154685284|ref|YP_001420445.1| hypothetical protein RBAM_008300 [Bacillus amyloliquefaciens FZB42] gi|154351135|gb|ABS73214.1| AcoA [Bacillus amyloliquefaciens FZB42] Length = 333 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 122/318 (38%), Positives = 179/318 (56%), Gaps = 2/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L Y+ ML IR FE+K +L+ G++ GF HL G+EAV G+ L +GD + Sbjct: 11 LTEEKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAAGVCAHLDDGDSIT 70 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GIVG +L Sbjct: 71 STHRGHGHCIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFTL 130 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+++ + V FGDGA NQG +E N+AA+WNL V+++ ENN Y T+ Sbjct: 131 ACGSALTAKYKQTKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFIAENNGYGEATTF 190 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ASA + + R ++N+PG+ VDG DI AV +A+ R GP +IE +TYR G Sbjct: 191 EYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAGEAIERARNGGGPSLIECMTYRNYG 250 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D Y+T++E E D I+ + LL L +IE V + I +V F Sbjct: 251 HFEGDAQTYKTKDEKTEHLEEKDAIQGFKNYLLKE--TDANKLSDIEQRVSESIEKAVSF 308 Query: 347 AQSDKEPDPAELYSDILI 364 ++ P +EL +D+ + Sbjct: 309 SEKSPYPKESELLTDVYV 326 >gi|332667473|ref|YP_004450261.1| pyruvate dehydrogenase E1 component subunit alpha [Haliscomenobacter hydrossis DSM 1100] gi|332336287|gb|AEE53388.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Haliscomenobacter hydrossis DSM 1100] Length = 345 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 150/316 (47%), Positives = 214/316 (67%), Gaps = 1/316 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 ++KEQ L Y LML IRRFEE+A +YG + GFCH+ IGQEA+ G++ ++T+ D + Sbjct: 19 TYSKEQYLFWYELMLRIRRFEERALMMYGQQKIRGFCHVYIGQEAIAAGIESAITKQDGI 78 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 +TAYR+HG L GV + ++MAEL G+ GI KGKGGSMH F +N ++GG+GIVGAQ+ Sbjct: 79 VTAYRQHGIALGRGVTSREVMAELYGKSTGIVKGKGGSMHFFDARNKYFGGNGIVGAQIP 138 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +GTGI FA KY+ + CV FGDGA+ QG +YESFN+A W L V+Y++ENN YAMGTS Sbjct: 139 IGTGIGFAEKYKGTQNFCVTMFGDGASRQGALYESFNMAMTWKLPVLYIVENNGYAMGTS 198 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R S K G+SF +P VDGM +V + +A + RA KGP +E+ TYRY+ Sbjct: 199 VERTSNVEELWKIGLSFEMPSESVDGMSPESVHEAISRAAEHIRAGKGPYFLEIRTYRYK 258 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS+SDPA YRT+EE+ + DPI+ +++ K A+ +++ I+ ++ I ++V+ Sbjct: 259 GHSVSDPAKYRTKEEVQAY-QDRDPIKVTEDKIVSGKIATAEEIQAIKDKIKAEIEDAVQ 317 Query: 346 FAQSDKEPDPAELYSD 361 FA+ PD +EL++D Sbjct: 318 FAEDSPYPDASELFTD 333 >gi|311745377|ref|ZP_07719162.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Algoriphagus sp. PR1] gi|126577922|gb|EAZ82142.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Algoriphagus sp. PR1] Length = 339 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 154/319 (48%), Positives = 206/319 (64%), Gaps = 1/319 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +++KE Y MLL+RRFEEKAGQLYG + GFCHL IGQEA G +L + D+ Sbjct: 13 KYSKETYSYWYESMLLMRRFEEKAGQLYGQQKIRGFCHLYIGQEACASGAITALEKDDKW 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR H H L G D +MAEL G+ G +KGKGGSMH+F + F GGHGIVGAQV Sbjct: 73 ITAYRCHAHPLGLGTDPGAVMAELFGKATGTTKGKGGSMHIFDKEKNFMGGHGIVGAQVP 132 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G GI FA KY+ S +C+ GDGA QG +E+ N+A L+ VI+VIENN YAMGT+ Sbjct: 133 MGLGIGFAEKYKGSKNLCICYMGDGAVRQGAFHEAMNLAMLYKTPVIFVIENNGYAMGTA 192 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V R+S + S G S+++P VDGM++ AV + +A + GP ++EM TYRY+ Sbjct: 193 VKRSSNVDDLSTLGESYDMPSFAVDGMNVEAVHEAVAEAADRAKRGDGPTLLEMRTYRYK 252 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHSMSDP YRT+EE+ E DP+EQV K + NK SE ++KEI V+K + ++V+ Sbjct: 253 GHSMSDPQKYRTKEEVEEY-KQRDPVEQVLKTIQDNKILSEDEIKEIVDKVKKKVTDAVK 311 Query: 346 FAQSDKEPDPAELYSDILI 364 FA+ PD + + D+ + Sbjct: 312 FAEESPWPDGQDAFKDVYV 330 >gi|321314535|ref|YP_004206822.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis BSn5] gi|320020809|gb|ADV95795.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Bacillus subtilis BSn5] Length = 333 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 124/318 (38%), Positives = 180/318 (56%), Gaps = 2/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L Y+ ML IR FE+K +L+ G++ GF HL G+EAV VG+ L +GD + Sbjct: 11 LTEEKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLHDGDSIT 70 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D +MAE+ G+ G+ KGKGGSMH+ G G +GIVG +L Sbjct: 71 STHRGHGHCIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFTL 130 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+++ + V FGDGA NQG +E N+AA+WNL V++V ENN Y T Sbjct: 131 ACGSALTAKYKQTKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAENNGYGEATPF 190 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 ASA + + R ++N+PG+ VDG DI AV ++A+ R GP +IE +TYR G Sbjct: 191 EYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAIERARNGGGPSLIECMTYRNYG 250 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D Y+T++E E D I+ + LL L +IE V + I +V F Sbjct: 251 HFEGDAQTYKTKDERVEHLEEKDAIQGFKNYLLKE--TDANKLSDIEQRVSESIEKAVSF 308 Query: 347 AQSDKEPDPAELYSDILI 364 ++ P +EL +D+ + Sbjct: 309 SEDSPYPKDSELLTDVYV 326 >gi|326472322|gb|EGD96331.1| pyruvate dehydrogenase E1 component alpha subunit [Trichophyton tonsurans CBS 112818] Length = 422 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 155/365 (42%), Positives = 221/365 (60%), Gaps = 11/365 (3%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLI 62 + + + G + +PS + +D P + K++ Y M+ I Sbjct: 47 LPNERIHAGRKEKMTSPSSVKLSDESFETYELDPPPY----TLKTTKKELKQMYYDMVSI 102 Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR E A +LY + GFCHL GQEAV G++ ++T D++ITAYR HG + G Sbjct: 103 RRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAITPDDKLITAYRCHGFAMMRGGTV 162 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 I+ EL GR+ GI+ GKGGSMHMF F+GG+GIVGAQV +G G+AFA +Y Sbjct: 163 RSIIGELLGRREGIAYGKGGSMHMF--AKNFFGGNGIVGAQVPVGAGLAFAQQYNGEANT 220 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 V +GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGT+ +R+SA T++ KRG Sbjct: 221 TVCLYGDGASNQGQVFEAFNMAKLWNLPVMFGCENNKYGMGTAANRSSALTDYYKRGQY- 279 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEI 301 IPG++V+GMD+ A+KA + Y + +GP++ E +TYRY GHSMSDP YRTREEI Sbjct: 280 -IPGIKVNGMDVLAIKAAVQYGREYTVSGQGPLVFEYVTYRYGGHSMSDPGTTYRTREEI 338 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--PAELY 359 MRS +DPI ++++LL SE +LK I+ + R +++ V A+ PD P L+ Sbjct: 339 QRMRSTNDPIAGLKQKLLDWNITSEEELKAIDKDARSMVDEEVAIAEKMPVPDATPRILF 398 Query: 360 SDILI 364 DI + Sbjct: 399 EDIYV 403 >gi|194769047|ref|XP_001966619.1| GF22274 [Drosophila ananassae] gi|190617383|gb|EDV32907.1| GF22274 [Drosophila ananassae] Length = 399 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 160/344 (46%), Positives = 220/344 (63%), Gaps = 12/344 (3%) Query: 27 ATSSVDCVDIPF----LEGFEVSE--FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF LE +E K++ L Y M IRR E AG LY ++ G Sbjct: 34 ATEATIQVNRPFKLHRLEEGPATEVKLTKDEALKYYTQMQTIRRLETAAGNLYKEKIIRG 93 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV + ++AELTG QGG ++GK Sbjct: 94 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPAGVLAELTGVQGGCARGK 153 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+S FYGG+GIVGAQV LGTG+ A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 154 GGSMHMYSP--NFYGGNGIVGAQVPLGTGVGLACKYKGNGGMCLALYGDGAANQGQVFEA 211 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 212 YNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 269 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y GP+++E TYRY GHSMSDP YRTREEI E+R DPI ++ + Sbjct: 270 TEFAINYV-NTVGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 328 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + ++K I++ VRK ++ + FA+SD E + L++D+ Sbjct: 329 ELGLITADEVKAIDLKVRKEVDEATAFAKSDAELGVSHLWTDVY 372 >gi|228939896|ref|ZP_04102473.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972786|ref|ZP_04133385.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228979370|ref|ZP_04139706.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis Bt407] gi|228780374|gb|EEM28605.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis Bt407] gi|228787001|gb|EEM34981.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228819827|gb|EEM65875.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326940544|gb|AEA16440.1| acetoin dehydrogenase E1 component [Bacillus thuringiensis serovar chinensis CT-43] Length = 332 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 183/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNERDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ PD EL D+ + Sbjct: 311 FSENSPYPDDEELLKDVYV 329 >gi|90994458|ref|YP_536948.1| pyruvate dehydrogenase E1 component alpha subunit [Porphyra yezoensis] gi|122194709|sp|Q1XDM0|ODPA_PORYE RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|90819022|dbj|BAE92391.1| pyruvate dehydrogenase E1 component alpha subunit [Porphyra yezoensis] Length = 346 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 134/342 (39%), Positives = 199/342 (58%), Gaps = 13/342 (3%) Query: 32 DCVDIPFLEGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEA 90 V +P NK L Y MLL R FE+ Q+Y G + GF HL GQEA Sbjct: 5 KKVQLPLTNYNSTGLNLNKSNLLVLYEDMLLGRNFEDMCAQMYYKGKMFGFVHLYNGQEA 64 Query: 91 VIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK 150 V G+ L D + + YR+H H L+ GV + +MAEL G++ G SKG+GGSMH+FS Sbjct: 65 VSTGVIKLLNPTDYVCSTYRDHVHALSKGVPSKNVMAELFGKETGCSKGRGGSMHIFSAP 124 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSD-------KICVVCFGDGAANQGQVYESFNI 203 + F GG + + + TG AF + YR+ ++ FGDG N GQ +E N+ Sbjct: 125 HNFLGGFAFIAEGIPVATGAAFQSIYRQQVLKETEDLRVTACFFGDGTTNNGQFFECLNM 184 Query: 204 AALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 A LW L +I+V+ENNQ+A+G + R+S+ K+ +F +PG++VDGMD+ AV+ + Sbjct: 185 AVLWKLPIIFVVENNQWAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQAAKQ 244 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 AV R GP +IE LTYR+RGHS++DP R+R+E + DPI++++K +L N+ Sbjct: 245 AVQRARQGDGPTLIEALTYRFRGHSLADPDELRSRQEKEAWVA-RDPIKKLKKYILDNEI 303 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE----LYSD 361 A+ G+L EI+ V+ + +V+FA S EP+ +E L++D Sbjct: 304 ANIGELNEIQNAVKTELEQAVKFAISSPEPNMSELKRYLFAD 345 >gi|310793140|gb|EFQ28601.1| pyruvate dehydrogenase E1 component [Glomerella graminicola M1.001] Length = 409 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 160/372 (43%), Positives = 223/372 (59%), Gaps = 12/372 (3%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPF----LEGFEVS-EFNKEQELSA 55 + + + VT L V + D F L+ + + K++ Sbjct: 22 LVASTRSVTTNAASATLEKGVPQSDEEPFQITLSDESFETYQLDPPPYTLDVTKKELKQM 81 Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M+++R+ E A +LY + GFCHL GQEAV VG++ +L D +ITAYR HG Sbjct: 82 YKDMVVVRQLEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHALNREDDLITAYRCHGFA 141 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 G I+ EL GR+ GIS GKGGSMHMF GFYGG+GIVGAQV +G G+AFA+K Sbjct: 142 YMRGGTVRSIIGELLGRREGISYGKGGSMHMF--AKGFYGGNGIVGAQVPVGAGLAFAHK 199 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y V+ +GDGA+NQGQV+E+FN+A LWNL ++ ENN+Y MGT+ +R+SA T++ Sbjct: 200 YNGRKNASVILYGDGASNQGQVFEAFNMAKLWNLPALFGCENNKYGMGTAAARSSALTDY 259 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-AN 294 KRG IPG++V+GMD+ AVKA + Y A GP+++E +TYRY GHSMSDP Sbjct: 260 YKRGQY--IPGLKVNGMDVLAVKAAVKYGKDYTVAENGPLVLEYVTYRYGGHSMSDPGTT 317 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRTREEI MRS +DPI ++++++ +E +LK I+ R +N V A++ PD Sbjct: 318 YRTREEIQRMRSTNDPIAGLKQKIMDWGVVTEDELKTIDKEARSFVNEEVAAAEAMPVPD 377 Query: 355 --PAELYSDILI 364 P LY DI + Sbjct: 378 TTPKILYEDIYV 389 >gi|307193004|gb|EFN75992.1| Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [Harpegnathos saltator] Length = 379 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 157/340 (46%), Positives = 224/340 (65%), Gaps = 7/340 (2%) Query: 27 ATSSVDCVDIPFLEGFEVSEFN--KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 A+ + L+ ++ ++ ++ +R + +IRR E AG LY ++ GFCHL Sbjct: 16 ASFETKPYRLHKLDSGPSTQVTVTRDDAIALFRQLHMIRRMETAAGNLYKEKIIRGFCHL 75 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 GQEA VGMK ++ D +ITAYR HG G+D +++ELTGRQGG ++GKGGSM Sbjct: 76 YSGQEACAVGMKAAMRPQDCVITAYRAHGWTYLMGIDTFGVLSELTGRQGGNARGKGGSM 135 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+S FYGG+GIVGAQV LG GIA A+KY + +C+ +GDGAANQGQV+E +N+A Sbjct: 136 HMYSK--NFYGGNGIVGAQVPLGVGIALAHKYLNTGGVCLALYGDGAANQGQVFEVYNMA 193 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 LW++ I+V ENN Y MGTSV RASA T++ RG +PG+ VDGMD+ AV+ A Sbjct: 194 KLWDVPCIFVCENNGYGMGTSVERASANTDYYTRGDY--VPGIWVDGMDVLAVREATKFA 251 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKW 323 + YC + KGP+++E +TYRY GHSMSDP YRTREE+ E+R DP+ ++R+L+ Sbjct: 252 IDYCTSGKGPMVMETVTYRYSGHSMSDPGTSYRTREEVQEVRQTRDPLTSFKERILNANL 311 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + ++K IE +RK +++ V+ A++DKE +EL +DI Sbjct: 312 VTADEIKTIEGEIRKKVDDGVKAAKADKEIPLSELTADIY 351 >gi|218461962|ref|ZP_03502053.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Rhizobium etli Kim 5] Length = 302 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 194/278 (69%), Positives = 239/278 (85%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 G V++F++++EL AYR MLLIRRFEEKAGQLYGMG +GGFCHL IGQEAV+VGM+M+ Sbjct: 25 GGPVADFDRDEELKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQMAQK 84 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 EGDQ+ITAYR+HGH+LA G++A +MAELTGR+ G S GKGGSMHMFS + FYGGHGIV Sbjct: 85 EGDQVITAYRDHGHMLATGMEARGVMAELTGRRSGYSHGKGGSMHMFSKEKHFYGGHGIV 144 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQVSLGTG+AFAN+YR + + + FGDGAANQGQVYESFN+AALW L ++Y++ENN+Y Sbjct: 145 GAQVSLGTGLAFANRYRNNGNVAIAYFGDGAANQGQVYESFNMAALWKLPIVYIVENNRY 204 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 AMGTS +RA+AQ+N+S RG F IPG+QVDGMD+RAVKA D+A+ +CR+ KGPII+EML Sbjct: 205 AMGTSTARATAQSNYSLRGSGFGIPGIQVDGMDVRAVKAAADEALEHCRSGKGPIILEML 264 Query: 281 TYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRL 318 TYRYRGHSMSDPA YR++EE+ +MRS DPIEQV+ RL Sbjct: 265 TYRYRGHSMSDPAKYRSKEEVQKMRSEQDPIEQVKARL 302 >gi|330833465|ref|YP_004402290.1| putative pyruvate dehydrogenase E1 component subunit alpha [Streptococcus suis ST3] gi|329307688|gb|AEB82104.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus suis ST3] Length = 322 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 126/322 (39%), Positives = 192/322 (59%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + KEQ L + M IR + K +L G V G H +G+EA VG LT+ D Sbjct: 1 MVSITKEQHLDMFLKMQQIRDVDMKLNKLVRRGFVQGMTHFSVGEEAAAVGPIAGLTDED 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH++A G+D + +MAEL G+ G SKG+GGSMH+ + + G +G +GIVG Sbjct: 61 IIFSHHRGHGHVIAKGIDINGMMAELAGKATGTSKGRGGSMHLANVEKGNFGSNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y +D I + GD A N+G +ES N+AA+WNL VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYLGTDNIVIAFSGDSATNEGSFHESMNLAAVWNLPVIFFITNNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T +S ++ + +R ++ IPG V DG D+ AV M + + Y RA GP ++E+ +Y Sbjct: 181 TDISYSTKIPHLYQRAAAYGIPGHYVEDGNDVIAVYEKMQEVIEYVRAGNGPAMVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE+NE ++ DP+++ RK L NK A++ +L IE V + + Sbjct: 241 RWFGHSTADAGVYRTKEEVNEWKAK-DPLKKYRKYLTENKIATDEELDAIEAQVAEQVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 SV+FAQ +PD + Y D+ + Sbjct: 300 SVKFAQESPDPDISVAYEDVFV 321 >gi|710400|gb|AAA86507.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] Length = 389 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 158/372 (42%), Positives = 234/372 (62%), Gaps = 11/372 (2%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVD--IPFL-----EGFEVSEFNKEQEL 53 M +++ I + + S + ++ ++ +PF E + ++ L Sbjct: 1 MALSRLSSRSNIITRPFSAAFSRLISTDTTPITIETSLPFTAHLCDPPSRSVESSSQELL 60 Query: 54 SAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHG 113 +R M L+RR E A LY ++ GFCHL GQEAV +GM+ ++T+ D +ITAYR+H Sbjct: 61 DFFRTMALMRRMEIAADSLYKANVIRGFCHLYDGQEAVAIGMEAAITKKDAIITAYRDHC 120 Query: 114 HILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFA 173 L G ++ +EL GRQ G SKGKGGSMH + ++ FYGGHGIVGAQV LG GIAFA Sbjct: 121 IFLGRGGSLHEVFSELMGRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVPLGCGIAFA 180 Query: 174 NKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQT 233 KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ RA+ Sbjct: 181 QKYNKEEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTAEWRAAKSP 240 Query: 234 NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP- 292 ++ KRG +PG++VDGMD AVK A + KGPII+EM TYRY GHSMSDP Sbjct: 241 SYYKRGDY--VPGLKVDGMDAFAVKQACKFAKQHA-LEKGPIILEMDTYRYHGHSMSDPG 297 Query: 293 ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKE 352 + YRTR+EI+ +R DPIE+++K +L + A+E +LK++E +RK +++++ A+ Sbjct: 298 STYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAKDCPM 357 Query: 353 PDPAELYSDILI 364 P+P+EL++++ + Sbjct: 358 PEPSELFTNVYV 369 >gi|78223956|ref|YP_385703.1| dehydrogenase, E1 component [Geobacter metallireducens GS-15] gi|78195211|gb|ABB32978.1| Dehydrogenase, E1 component [Geobacter metallireducens GS-15] Length = 325 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 132/325 (40%), Positives = 189/325 (58%), Gaps = 1/325 (0%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 +E + + + Y M+L R FEE + Y G + GF HL GQEAV VG Sbjct: 1 MESKLRALLPDAELIRMYEQMVLSREFEESCAEQYTKGHITGFLHLYSGQEAVAVGATAG 60 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L D +++AYREH + G + ++MAEL G++ GI KGKGGSMH+F F GG+ Sbjct: 61 LHRDDYILSAYREHAQAIVRGAEPRRVMAELFGKRTGICKGKGGSMHLFDPNLSFMGGYA 120 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG Q + G+AFA K+R+ +I FGDGAANQG +ES N A LW L V+++ ENN Sbjct: 121 IVGGQFPIAVGLAFAAKFRKEGRIVACFFGDGAANQGTFHESLNWARLWELPVLFICENN 180 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 Y +GTSV RASA + +R ++IP +V GMD+ AV + A + R P +IE Sbjct: 181 SYGIGTSVERASALPDIHRRTCGYDIPSERVHGMDVIAVYEAVKWAAEWVREQNRPFLIE 240 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 +TYR+RGHSMSDP YR+ E+ +S DPI RL+ + A+E L+ I+ Sbjct: 241 AITYRFRGHSMSDPGKYRSLAEVELWKS-RDPIPAFANRLVEEEIATEAQLEGIKQQALV 299 Query: 339 IINNSVEFAQSDKEPDPAELYSDIL 363 + ++V+FA+ P+ +E++ D+ Sbjct: 300 TVADAVKFAEDSPWPEDSEVWEDVY 324 >gi|206971744|ref|ZP_03232693.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus AH1134] gi|228921447|ref|ZP_04084770.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228953107|ref|ZP_04115167.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229079966|ref|ZP_04212497.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock4-2] gi|229150987|ref|ZP_04279198.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus m1550] gi|229179062|ref|ZP_04306419.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus 172560W] gi|296503318|ref|YP_003665018.1| acetoin dehydrogenase E1 component subunit alpha [Bacillus thuringiensis BMB171] gi|206733129|gb|EDZ50302.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus AH1134] gi|228604430|gb|EEK61894.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus 172560W] gi|228632547|gb|EEK89165.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus m1550] gi|228703345|gb|EEL55800.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock4-2] gi|228806613|gb|EEM53172.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228838220|gb|EEM83538.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296324370|gb|ADH07298.1| acetoin dehydrogenase E1 component alpha-subunit [Bacillus thuringiensis BMB171] Length = 332 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 183/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ PD EL D+ + Sbjct: 311 FSENSPYPDDEELLKDVYV 329 >gi|229046474|ref|ZP_04192129.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH676] gi|229145353|ref|ZP_04273742.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BDRD-ST24] gi|228638192|gb|EEK94633.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BDRD-ST24] gi|228724836|gb|EEL76138.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus AH676] Length = 332 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 183/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDNI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ PD EL D+ + Sbjct: 311 FSENSPYPDDEELLKDVYV 329 >gi|225555454|gb|EEH03746.1| pyruvate dehydrogenase [Ajellomyces capsulatus G186AR] Length = 405 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 161/368 (43%), Positives = 225/368 (61%), Gaps = 14/368 (3%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAYRLM 59 + D A ++ + +V D F E +E+ E K++ YR M Sbjct: 24 RRSVTTDAASAHAEAIPVEEDKPFTVKLSDESF-ETYELDPPPYTLETTKQELKQMYRDM 82 Query: 60 LLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACG 119 + IRR E A +LY + GFCHL GQEAV G++ ++T+ D++ITAYR HG L G Sbjct: 83 VSIRRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAITKDDKLITAYRCHGFALLRG 142 Query: 120 VDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRS 179 I+ EL GR+ GI+ GKGGSMHMF FYGG+GIVGAQV +G G+AFA +Y Sbjct: 143 GTVKSIIGELLGRREGIAYGKGGSMHMF--AKNFYGGNGIVGAQVPVGAGLAFAQQYNDE 200 Query: 180 DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRG 239 + +GDGA+NQGQV+E+FN+A LWNL I+ ENN+Y MGT+ +RA+A T++ KRG Sbjct: 201 KTTTIALYGDGASNQGQVFEAFNMAKLWNLPCIFGCENNKYGMGTAANRAAALTDYYKRG 260 Query: 240 VSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTR 298 IPG++++GMD+ A+KA + Y + KGP++ E +TYRY GHSMSDP YRTR Sbjct: 261 QY--IPGLKINGMDVLAIKAAVQYGREYTTSGKGPLVFEYVTYRYGGHSMSDPGTTYRTR 318 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD--PA 356 EEI MRS +DPI ++++LL SE +LK I+ + RK +++ V A+ EPD P Sbjct: 319 EEIQRMRSTNDPIAGLKQKLLDWGVTSEEELKAIDKDARKYVDDEVAEAELMTEPDATPR 378 Query: 357 ELYSDILI 364 L+ D + Sbjct: 379 ILFEDTYV 386 >gi|260946491|ref|XP_002617543.1| hypothetical protein CLUG_02987 [Clavispora lusitaniae ATCC 42720] gi|238849397|gb|EEQ38861.1| hypothetical protein CLUG_02987 [Clavispora lusitaniae ATCC 42720] Length = 398 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 154/372 (41%), Positives = 215/372 (57%), Gaps = 22/372 (5%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLE----GFEVSEFN----KEQELSA 55 V K L A S + +D+P + E KE L Sbjct: 9 PLPRVLATGAKRNLA-------VAASDLVTIDLPASSFETYNIDAPELTFETEKETLLQM 61 Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y+ M++IRR E A LY + GFCHL +GQEA+ VG++ ++ D +IT+YR HG Sbjct: 62 YKDMIVIRRMEMAADALYKAKKIRGFCHLSVGQEAIAVGIENAIAPTDTVITSYRCHGFA 121 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 G ++ EL G++ G+S GKGGSMHMF+ GFYGG+GIVGAQV LG G++FA+K Sbjct: 122 HMRGASVKSVLGELMGKRSGVSYGKGGSMHMFAP--GFYGGNGIVGAQVPLGAGLSFAHK 179 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 YR +GDGA+NQGQV+ES+N+A LW+L ++ ENN+Y MGTS SR+SA T + Sbjct: 180 YRNDKGATFALYGDGASNQGQVFESYNMAKLWDLPCVFACENNKYGMGTSASRSSAMTEY 239 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-AN 294 KRG IPG++V+GMDI A A +C + GP+++E TYRY GHSMSDP Sbjct: 240 YKRGQY--IPGLKVNGMDILACYQASKFAKDWCSSGNGPLVLEYETYRYGGHSMSDPGTT 297 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD 354 YRTREE+ MRS +DPI ++ LL A+E ++K + RK ++ A++D P+ Sbjct: 298 YRTREEVQHMRSRNDPIAGLKAILLDKNIATEEEIKSYDKAARKYVDEQTAEAEADAPPE 357 Query: 355 P--AELYSDILI 364 L+ D+ + Sbjct: 358 AKMEILFEDVYV 369 >gi|253752506|ref|YP_003025647.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus suis SC84] gi|253754332|ref|YP_003027473.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus suis P1/7] gi|253756266|ref|YP_003029406.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus suis BM407] gi|251816795|emb|CAZ52438.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus suis SC84] gi|251818730|emb|CAZ56566.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus suis BM407] gi|251820578|emb|CAR47334.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus suis P1/7] gi|319758915|gb|ADV70857.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Streptococcus suis JS14] Length = 322 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 127/322 (39%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + KEQ L + M IR + K +L G V G H +G+EA VG LT+ D Sbjct: 1 MVSITKEQHLDMFLKMQQIRDVDMKLNKLVRRGFVQGMTHFSVGEEAAAVGPIAGLTDED 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH++A G+D + +MAEL G+ G SKG+GGSMH+ + + G +G +GIVG Sbjct: 61 IIFSHHRGHGHVIAKGIDINGMMAELAGKATGTSKGRGGSMHLANVEKGNFGSNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y +D I + GD A N+G +ES N+AA+WNL VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYLGTDNIVIAFSGDSATNEGSFHESMNLAAVWNLPVIFFITNNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T +S ++ + +R ++ IPG V DG D+ AV M + + Y RA KGP ++E+ +Y Sbjct: 181 TDISYSTKIPHLYQRAAAYGIPGHYVEDGNDVIAVYEKMQEVIEYVRAGKGPAMVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE+NE ++ DP+++ RK L NK A++ +L IE V + + Sbjct: 241 RWFGHSTADAGVYRTKEEVNEWKAK-DPLKKYRKYLTENKIATDEELDAIEAQVAEQVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 SV+FAQ +PD + Y D+ + Sbjct: 300 SVKFAQESPDPDISVAYEDVFV 321 >gi|227820169|ref|YP_002824140.1| acetoin dehydrogenase TPP-dependent subunit alpha [Sinorhizobium fredii NGR234] gi|227339168|gb|ACP23387.1| acetoin dehydrogenase TPP-dependent alpha chain [Sinorhizobium fredii NGR234] Length = 344 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 132/341 (38%), Positives = 195/341 (57%), Gaps = 4/341 (1%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFC 82 RA D ++PF+ ++N+EQ L A R M LIRRFEE A + Y G++ G Sbjct: 4 PARAMQVESDTSNLPFI----YRQYNREQLLDALRKMHLIRRFEEGAEECYMRGLIHGTM 59 Query: 83 HLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGG 142 HL IGQEA +G+ M L DQ+ + +R HGH +A D ++ AE G+ G G+GG Sbjct: 60 HLSIGQEASAMGICMPLVNEDQITSTHRGHGHCIAKDADVKRMFAEFFGKTTGYCAGRGG 119 Query: 143 SMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFN 202 SMH+ G G +GIVG + + G A K R+ K+ V FGDGA N+G +E+ N Sbjct: 120 SMHIADVSTGNLGANGIVGGGLPIAVGAALTAKRLRTGKVVVCFFGDGANNEGAFHEALN 179 Query: 203 IAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMD 262 +A +W L VI+V ENN Y M TS +R++A N + R ++++PG+ VDG + V Sbjct: 180 MATIWKLPVIFVCENNGYGMSTSTARSTAVANVADRAAAYSMPGVIVDGNVLSDVAEASH 239 Query: 263 KAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNK 322 +AV R GP +IE TYRYRGHS SD YRTR+EI++ +N DPI++ +L+ Sbjct: 240 EAVERARRGDGPTLIECKTYRYRGHSKSDRNRYRTRDEIDDWMTNRDPIKRYEAQLIEFG 299 Query: 323 WASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 A+ +L+ + +V++ I +EFA++ P L ++ Sbjct: 300 IATSDELEAVRGSVQQEIEAGIEFAKASPMPSIDGLADNVY 340 >gi|228908516|ref|ZP_04072356.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis IBL 200] gi|228851069|gb|EEM95883.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis IBL 200] Length = 332 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 184/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y+ ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYKKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+E Sbjct: 251 GHFEGEAQTYKTTEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 311 FSENSPYPEDEELLKDVYV 329 >gi|218231470|ref|YP_002367493.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus B4264] gi|218159427|gb|ACK59419.1| TPP-dependent acetoin dehydrogenase E1 alpha-subunit [Bacillus cereus B4264] Length = 332 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 183/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ PD EL D+ + Sbjct: 311 FSENSPYPDDEELLKDVYV 329 >gi|228478232|ref|ZP_04062840.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus salivarius SK126] gi|228249911|gb|EEK09181.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus salivarius SK126] Length = 357 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 121/336 (36%), Positives = 186/336 (55%) Query: 28 TSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIG 87 T + + V + V +KE+ S Y+ M IR FEE A + +G + GF HL G Sbjct: 20 TLTKEEVKVQTAHNLGVENVSKEEAKSMYKTMCDIRNFEENARHFFSIGQIPGFVHLYSG 79 Query: 88 QEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMF 147 +EA+ G+ +LT+ D + + +R HGH +A G D K+MAE+ G+ G+ KGKGGSMH+ Sbjct: 80 EEAIATGVCANLTDKDYITSTHRGHGHCVAKGGDLKKMMAEIFGKSTGLGKGKGGSMHIA 139 Query: 148 STKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALW 207 G G +G+VG L TG A NKY ++D + V FGDGAAN+G +E N+A++W Sbjct: 140 DLDKGILGANGMVGGGFGLATGAAMRNKYLKTDDVAVCFFGDGAANEGNFHECLNMASIW 199 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 NL V++V ENN +A T +S ++R ++N+PG++V+G D+ AV +A+ Sbjct: 200 NLPVVFVNENNLFAESTPQWYSSGSPTIAERAQAYNMPGVRVNGKDLFAVYQVAKEAIER 259 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 R GP +IE +TYR GH D Y+ + I + ++ D +E R + S+ Sbjct: 260 ARRGDGPTLIEAITYRNHGHFEGDEQKYKAPDGIEKEWADVDALEVFRDLVTEKGILSQD 319 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +L EI +K + +++ FAQ P LY D+ Sbjct: 320 ELDEIVAQSQKDVEDAIHFAQESPIPKEEALYEDVF 355 >gi|307708690|ref|ZP_07645153.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis NCTC 12261] gi|307615264|gb|EFN94474.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis NCTC 12261] Length = 322 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 123/321 (38%), Positives = 184/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSILDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQHTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVKHIHQRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLIENTIASAEELEEIQTQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|116789182|gb|ABK25148.1| unknown [Picea sitchensis] Length = 400 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 161/383 (42%), Positives = 224/383 (58%), Gaps = 22/383 (5%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAA-------------TSSVDCVDIPFL-----EGF 42 M + + A PS + RAA T+ ++PF Sbjct: 1 MAPSLSKLLRTAATTAKPPSWNGLRAACTRSISSESYSDKTTITVETNLPFTTHQCEPPS 60 Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 + E + + Y M +RR E A LY ++ GFCHL GQEAV GM+ +LT Sbjct: 61 RIVETTPAELMKFYADMFTMRRMEIAADSLYKSKLIRGFCHLYDGQEAVCTGMEAALTRK 120 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D +ITAYR+H G ++ AEL GR+ G S GKGGSMH + +NGFYGGHGIVGA Sbjct: 121 DCIITAYRDHCLFYGRGGTLLEVFAELMGRKDGCSHGKGGSMHFYKKENGFYGGHGIVGA 180 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 QV LG G+AFA KY +++ + +GDGAANQGQ++E+ N++ALWNL + V ENN Y M Sbjct: 181 QVPLGCGLAFAQKYSKAEAVTFALYGDGAANQGQLFEALNMSALWNLPAVLVCENNHYGM 240 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GT+ RA+ + KRG PG++VDGMD+ AVK A + + GPII+EM TY Sbjct: 241 GTAEWRAAKSPAYYKRGDY--APGLKVDGMDVFAVKQAAKFAKEHALKN-GPIILEMDTY 297 Query: 283 RYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 RY GHSMSDP + YRTR+EI+ +R DPIE+VRK +L + A+ +LK+IE +K ++ Sbjct: 298 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLVLAHNIATPAELKDIEKEAKKEVD 357 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 +++ A+ PD +EL+S + + Sbjct: 358 DAIALAKECSLPDSSELFSHVYV 380 >gi|88608016|ref|YP_506677.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Neorickettsia sennetsu str. Miyayama] gi|88600185|gb|ABD45653.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Neorickettsia sennetsu str. Miyayama] Length = 334 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 164/331 (49%), Positives = 215/331 (64%), Gaps = 2/331 (0%) Query: 33 CVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVI 92 CV +L + + L Y MLLIRRFEE+AGQLY MG + GFCHL IGQEAV Sbjct: 4 CVFDWYLRCMLLEPLDSSVLLPLYEKMLLIRRFEERAGQLYSMGEICGFCHLYIGQEAVA 63 Query: 93 VGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG 152 VG+ L D +IT+YR+HG +L G +MAEL G+ G S GKGGSMHMF + Sbjct: 64 VGLDYCLKREDSVITSYRDHGMMLVRGSSPDVMMAELLGKSSGCSNGKGGSMHMFDPERN 123 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F+GGHGIVG+QVSLGTGIAFA KYR S+ + CFGDGA NQGQVYESFN+AALW L ++ Sbjct: 124 FFGGHGIVGSQVSLGTGIAFAEKYRDSNAVVASCFGDGAINQGQVYESFNMAALWKLPIL 183 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 YV+ENN YAMG+SV A ++ S RG SF IPG +GMD+ V AV R Sbjct: 184 YVVENNMYAMGSSVESVCANSSLSNRGESFGIPGYSANGMDLMDVIRVTMNAVEGVRGGS 243 Query: 273 GPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 GP+++E TYR++GHSMSDPA+YR++EE++ DP++ V LL +L+ + Sbjct: 244 GPVLVEYKTYRFKGHSMSDPASYRSKEEVSSF-KERDPLKSVETLLLQAGVL-HSELERV 301 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + V+ +++SV +A++ PD A L +D+ Sbjct: 302 QKAVKDQVSSSVAYARASTFPDKASLMTDVY 332 >gi|157109490|ref|XP_001650695.1| pyruvate dehydrogenase [Aedes aegypti] gi|108879025|gb|EAT43250.1| pyruvate dehydrogenase [Aedes aegypti] Length = 398 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 158/319 (49%), Positives = 212/319 (66%), Gaps = 5/319 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 K+ L Y M IRR E AG LY ++ GFCHL GQEA VGM+ ++ D Sbjct: 55 TVTKDDALKYYSQMYAIRRMETAAGNLYKEKIIRGFCHLYSGQEACAVGMRAAMRPEDSC 114 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG GV ++AELTGRQ G ++GKGGSMHM+ + FYGG+GIVGAQV Sbjct: 115 ITAYRCHGWTYLMGVSMQGVLAELTGRQSGCARGKGGSMHMY--SHNFYGGNGIVGAQVP 172 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY+ + +C+ +GDGAANQGQ++E +N+A LWN VI+V ENN Y MGTS Sbjct: 173 LGVGIAFAAKYKGTKGVCIAAYGDGAANQGQLFEVYNMAKLWNTPVIFVCENNGYGMGTS 232 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RASA N+ RG + +PG+ VDGMD+ AV+ A+ +C + KGPI++E TYRY Sbjct: 233 AERASANVNYYTRGDT--VPGIWVDGMDVLAVREATKFAIDHCNSGKGPILLETATYRYS 290 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YR+R+EI E+R DPI +R+++L N+ A+ +LKEIE +R ++++ Sbjct: 291 GHSMSDPGTSYRSRDEIAEVRQTRDPITSLREKILTNELATTEELKEIESKIRGEVDSAT 350 Query: 345 EFAQSDKEPDPAELYSDIL 363 + A++D+E EL +DI Sbjct: 351 KVAKADREIPVDELCTDIY 369 >gi|170030275|ref|XP_001843015.1| pyruvate dehydrogenase E1 component subunit alpha [Culex quinquefasciatus] gi|167866451|gb|EDS29834.1| pyruvate dehydrogenase E1 component subunit alpha [Culex quinquefasciatus] Length = 380 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 150/340 (44%), Positives = 221/340 (65%), Gaps = 8/340 (2%) Query: 27 ATSSVDCVDIPFLE--GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + L+ + N+++ + Y+ M IRR E AG LY +V GFCHL Sbjct: 18 ATFETKPFKLHNLQTGPPTSAVINRDEAVEYYKQMQTIRRLETSAGNLYKEKIVRGFCHL 77 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 GQEA VGMK ++ D +I+AYR HG GV ++AELTGRQ G ++GKGGSM Sbjct: 78 YSGQEACAVGMKAAMRPQDNIISAYRVHGWTYLMGVSPKGVLAELTGRQSGCARGKGGSM 137 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ FYGG+GIVGAQV LG G+A A +Y+ ++ +C+ +GDGA+NQGQV+E++N+A Sbjct: 138 HMYAP--NFYGGNGIVGAQVPLGAGVALACQYKGNNGVCLALYGDGASNQGQVFEAYNMA 195 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 LW L I+V ENN Y MGTS R+S+ TN+ +RG +PG+ VDGMD+ AVK D A Sbjct: 196 HLWKLPCIFVCENNGYGMGTSADRSSSNTNYFQRGDV--LPGIWVDGMDVVAVKLATDFA 253 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKW 323 + Y + GP+++E+ TYRY GHSMSDP YRTR+E+ E+R DPI ++++L Sbjct: 254 IDYVLKN-GPLVMEVFTYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSYKEKILTAGL 312 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 A+ ++K+I+ +++K ++ + ++A++D E EL +D+ Sbjct: 313 ATIDEIKKIDADIKKEVDEATKWAKADAEIGLPELTTDVY 352 >gi|254478132|ref|ZP_05091515.1| Dehydrogenase E1 component superfamily [Carboxydibrachium pacificum DSM 12653] gi|214035994|gb|EEB76685.1| Dehydrogenase E1 component superfamily [Carboxydibrachium pacificum DSM 12653] Length = 308 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 127/305 (41%), Positives = 180/305 (59%), Gaps = 2/305 (0%) Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ IR+FE K +LY M+ G HL +G+EA VG ++L D + + +R HGH +A Sbjct: 1 MVQIRQFELKTDELYKKNMIWGTYHLYVGEEAAAVGACVALEPTDYITSTHRGHGHTIAK 60 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G D ++MAEL G++ G KG+GGSMH+ G G +GIV + + TG A A+K R Sbjct: 61 GADLKRMMAELLGKETGHCKGRGGSMHIADISTGHLGANGIVAGGIPIATGAALASKLRG 120 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 ++ + FGDGAAN G ES N+A +W L V+Y ENNQYAM V++ +A N + R Sbjct: 121 DGRVTLCFFGDGAANTGAFNESLNMAGIWKLPVVYFCENNQYAMSAPVNKFTAVKNIADR 180 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTR 298 S+N+PG+ VDG D+ V + +AV R +GP +IE TYR+ GHS SDP YRTR Sbjct: 181 AASYNMPGVIVDGNDVLEVYKAVKEAVDRARKGEGPTLIEAKTYRWFGHSKSDPRVYRTR 240 Query: 299 EEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAEL 358 EE E DPI++ ++LL A+E +LK+I+ V K I + +FA EP +L Sbjct: 241 EE--EEWKKKDPIKRFAEKLLSEGVATEEELKKIDEEVAKEIEEAYQFAVESPEPKVEDL 298 Query: 359 YSDIL 363 + Sbjct: 299 AKYVY 303 >gi|195393044|ref|XP_002055164.1| GJ18942 [Drosophila virilis] gi|194149674|gb|EDW65365.1| GJ18942 [Drosophila virilis] Length = 399 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 155/344 (45%), Positives = 217/344 (63%), Gaps = 12/344 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF EG E + + K++ L Y M IRR E AG LY ++ G Sbjct: 34 ATEATVQVNRPFKLHRLEEGPETTVKLTKDEALKYYTQMQTIRRIETAAGNLYKEKIIRG 93 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV ++ ELTG Q G ++GK Sbjct: 94 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVPPLGVLGELTGVQSGCARGK 153 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+S F+GG+GIVGAQV LGTG+A A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 154 GGSMHMYSP--NFFGGNGIVGAQVPLGTGVALACKYKGNGGMCLALYGDGAANQGQVFEA 211 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 212 YNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 269 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y +GP+++E TYRY GHSMSDP YRTREEI E+R DPI ++ + Sbjct: 270 TEFAIKYV-NEQGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 328 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + ++K I++ VRK ++ + A+ E + L++D+ Sbjct: 329 ELGLITTDEVKAIDLKVRKEVDEATALAKGGTELALSHLWTDVY 372 >gi|119196145|ref|XP_001248676.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Coccidioides immitis RS] Length = 404 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 164/371 (44%), Positives = 226/371 (60%), Gaps = 15/371 (4%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAY 56 VA++ VT A +V A+ ++ D F E +E+ E K++ Y Sbjct: 21 VARRSVTTNAAS-AHADNVPAEDDKPFTIKLSDESF-ETYELDPPPYTLEVTKKELKQMY 78 Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ IRR E + +LY + GFCHL GQEAV VG++ +L D++ITAYR HG Sbjct: 79 RDMVAIRRMEMASDRLYKEKKIRGFCHLSTGQEAVAVGIEHALDREDKLITAYRCHGFAY 138 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G I+ EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV +G G+AFA KY Sbjct: 139 MRGGTIKSIVGELLGRREGIAYGKGGSMHMFAP--GFYGGNGIVGAQVPVGAGLAFAQKY 196 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 + +GDGA+NQGQV+E+FN+A LWNL VI+ ENN+Y MGT+ +RA+A T++ Sbjct: 197 EGKQNTTICLYGDGASNQGQVFEAFNMAKLWNLPVIFGCENNKYGMGTAANRAAAMTDYY 256 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANY 295 KRG IPG++++GMD+ A+KA + Y A GP++ E +TYRY GHSMSDP Y Sbjct: 257 KRGQY--IPGLKINGMDVLAIKAAVKYGREYTLAGHGPLVFEYVTYRYGGHSMSDPGTTY 314 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREEI MRS +DPI ++ +LL +E +LK I+ R +++ V A+ PD Sbjct: 315 RTREEIQRMRSTNDPIAGLKHKLLDWNVTTEEELKTIDKETRSFVDSEVAEAEKMPVPDA 374 Query: 356 AE--LYSDILI 364 L+ DI + Sbjct: 375 NSRILFEDIYV 385 >gi|326484492|gb|EGE08502.1| pyruvate dehydrogenase E1 component subunit alpha [Trichophyton equinum CBS 127.97] Length = 405 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 159/371 (42%), Positives = 220/371 (59%), Gaps = 20/371 (5%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEF---------NKEQELSAY 56 + D A + + SV D E FE E K++ Y Sbjct: 24 RRSVTTDAASAHAEDIPVEDDKPFSVKLSD----ESFETYELDPPPYTLKTTKKELKQMY 79 Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 M+ IRR E A +LY + GFCHL GQEAV G++ ++T D++ITAYR HG + Sbjct: 80 YDMVSIRRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAITPDDKLITAYRCHGFAM 139 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G I+ EL GR+ GI+ GKGGSMHMF F+GG+GIVGAQV +G G+AFA +Y Sbjct: 140 MRGGTVRSIIGELLGRREGIAYGKGGSMHMF--AKNFFGGNGIVGAQVPVGAGLAFAQQY 197 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 V +GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGT+ +R+SA T++ Sbjct: 198 NGEANTTVCLYGDGASNQGQVFEAFNMAKLWNLPVMFGCENNKYGMGTAANRSSALTDYY 257 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANY 295 KRG IPG++V+GMD+ A+KA + Y + +GP++ E +TYRY GHSMSDP Y Sbjct: 258 KRGQY--IPGIKVNGMDVLAIKAAVQYGREYTVSGQGPLVFEYVTYRYGGHSMSDPGTTY 315 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD- 354 RTREEI MRS +DPI ++++LL SE +LK I+ + R +++ V A+ PD Sbjct: 316 RTREEIQRMRSTNDPIAGLKQKLLDWNITSEEELKAIDKDARSMVDEEVAIAEKMPVPDA 375 Query: 355 -PAELYSDILI 364 P L+ DI + Sbjct: 376 TPRILFEDIYV 386 >gi|157109492|ref|XP_001650696.1| pyruvate dehydrogenase [Aedes aegypti] gi|108879026|gb|EAT43251.1| pyruvate dehydrogenase [Aedes aegypti] Length = 422 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 158/319 (49%), Positives = 212/319 (66%), Gaps = 5/319 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 K+ L Y M IRR E AG LY ++ GFCHL GQEA VGM+ ++ D Sbjct: 79 TVTKDDALKYYSQMYAIRRMETAAGNLYKEKIIRGFCHLYSGQEACAVGMRAAMRPEDSC 138 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG GV ++AELTGRQ G ++GKGGSMHM+ + FYGG+GIVGAQV Sbjct: 139 ITAYRCHGWTYLMGVSMQGVLAELTGRQSGCARGKGGSMHMY--SHNFYGGNGIVGAQVP 196 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG GIAFA KY+ + +C+ +GDGAANQGQ++E +N+A LWN VI+V ENN Y MGTS Sbjct: 197 LGVGIAFAAKYKGTKGVCIAAYGDGAANQGQLFEVYNMAKLWNTPVIFVCENNGYGMGTS 256 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RASA N+ RG + +PG+ VDGMD+ AV+ A+ +C + KGPI++E TYRY Sbjct: 257 AERASANVNYYTRGDT--VPGIWVDGMDVLAVREATKFAIDHCNSGKGPILLETATYRYS 314 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YR+R+EI E+R DPI +R+++L N+ A+ +LKEIE +R ++++ Sbjct: 315 GHSMSDPGTSYRSRDEIAEVRQTRDPITSLREKILTNELATTEELKEIESKIRGEVDSAT 374 Query: 345 EFAQSDKEPDPAELYSDIL 363 + A++D+E EL +DI Sbjct: 375 KVAKADREIPVDELCTDIY 393 >gi|312217346|emb|CBX97294.1| hypothetical protein [Leptosphaeria maculans] Length = 499 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 164/377 (43%), Positives = 221/377 (58%), Gaps = 29/377 (7%) Query: 13 IKMALNPSVS--AKRAATSSVDCVDIP-----------FLEGFEVSEF---------NKE 50 + A P+ AA+S D +P E FE E K+ Sbjct: 92 VAPAARPAFRFVTTDAASSHTDPEKVPEEDDKPFEVRLSDESFETYELDPPAYTLNTTKK 151 Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYR 110 + Y M+ +RR E A +LY + GFCHL GQEAV VG++ ++ D +ITAYR Sbjct: 152 ELKKMYYDMVAMRRMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAIERSDHVITAYR 211 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 HG L G I+ EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV +G GI Sbjct: 212 CHGFALMRGASVKSIIGELLGRREGIAYGKGGSMHMFAP--GFYGGNGIVGAQVPVGAGI 269 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 AFA +Y + + +GDGA+NQGQV+E++N+A LWNL +I+ ENN+Y MGT+ +R+S Sbjct: 270 AFACQYENKKNVTLALYGDGASNQGQVFEAYNMAKLWNLPIIFGCENNKYGMGTAANRSS 329 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 A T + KRG IPG++++GMD+ AVKA + Y A KGP++ E +TYRY GHSMS Sbjct: 330 AITEYYKRGQY--IPGLKINGMDVLAVKAAVQYGKEYTAAGKGPLVYEYVTYRYGGHSMS 387 Query: 291 DP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQS 349 DP YRTREEI MRS DPI ++++LL SE +LK I+ R ++ V A+ Sbjct: 388 DPGTTYRTREEIQRMRSTQDPIAGLKQKLLDWGVTSEEELKAIDKQARSEVDAEVAIAEK 447 Query: 350 DKEPD--PAELYSDILI 364 PD P L+ DI + Sbjct: 448 MPAPDPTPKVLFEDIYV 464 >gi|168017393|ref|XP_001761232.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687572|gb|EDQ73954.1| predicted protein [Physcomitrella patens subsp. patens] Length = 391 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 157/361 (43%), Positives = 221/361 (61%), Gaps = 9/361 (2%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIR 63 V + A P ++ V+ P + E + ++ + ++ M ++R Sbjct: 18 PAARVMSQALSTASEP-ITLDIPVPFKAHKVETPSV----TVETSAQELTNFFKTMFIMR 72 Query: 64 RFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDAS 123 R E A LY + GFCHL GQEAV VGM+ +L + D +ITAYR+H L G Sbjct: 73 RMEIAADSLYKSKFIRGFCHLYDGQEAVCVGMEAALNDKDCIITAYRDHCTHLGRGGSVL 132 Query: 124 KIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKIC 183 ++ AEL GR+ G S GKGGSMHM++ K GFYGG+GIVGAQ LG G+AFA KY + + + Sbjct: 133 EVFAELMGRKDGCSLGKGGSMHMYNKKGGFYGGNGIVGAQTPLGAGLAFAQKYLKVEGVT 192 Query: 184 VVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFN 243 + +GDGAANQGQ++E+ NI+ALWNL VIYV ENN Y MGT+ R++ + KRG Sbjct: 193 LAMYGDGAANQGQLFEAMNISALWNLPVIYVCENNHYGMGTAEWRSAKSPEYYKRGDY-- 250 Query: 244 IPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEIN 302 IPG++VDGMD AVK + A Y + GP+++EM TYRY GHSMSDP + YRTR+EI+ Sbjct: 251 IPGLKVDGMDCLAVKQAVKYAKEYALQN-GPMVLEMDTYRYHGHSMSDPGSTYRTRDEIS 309 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 +R DPIE++RK LL N A+ +LK +E +K + +++ A+ PD EL++ + Sbjct: 310 GVRQERDPIERIRKLLLSNNIATVAELKTMEKEAKKEVEDALSKAKESPSPDSDELFTHV 369 Query: 363 L 363 Sbjct: 370 Y 370 >gi|15221692|ref|NP_173828.1| IAR4; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring) [Arabidopsis thaliana] gi|118573089|sp|Q8H1Y0|ODPA2_ARATH RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|13430606|gb|AAK25925.1|AF360215_1 putative pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|2829869|gb|AAC00577.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|15293169|gb|AAK93695.1| putative pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|21593680|gb|AAM65647.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] gi|332192371|gb|AEE30492.1| pyruvate dehydrogenase E1 component subunit alpha-2 [Arabidopsis thaliana] Length = 393 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 156/371 (42%), Positives = 225/371 (60%), Gaps = 12/371 (3%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCV---DIPFLE-----GFEVSEFNKEQELS 54 ++ + T + PS + +T S +PF E + E+ L+ Sbjct: 6 LSSRSNTFLKPAITALPSSIRRHVSTDSSPITIETAVPFTSHLCESPSRSVETSSEEILA 65 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 +R M +RR E A LY ++ GFCHL GQEA+ VGM+ ++T+ D +IT+YR+H Sbjct: 66 FFRDMARMRRMEIAADSLYKAKLIRGFCHLYDGQEALAVGMEAAITKKDAIITSYRDHCT 125 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + G +EL GR+ G S GKGGSMH + FYGGHGIVGAQ+ LG G+AFA Sbjct: 126 FIGRGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQIPLGCGLAFAQ 185 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ R++ Sbjct: 186 KYNKDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTATWRSAKSPA 245 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG +PG++VDGMD AVK A + + GPII+EM TYRY GHSMSDP + Sbjct: 246 YFKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKN-GPIILEMDTYRYHGHSMSDPGS 302 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTR+EI+ +R DPIE+VRK LL + A+E +LK++E +RK ++++V A+ P Sbjct: 303 TYRTRDEISGVRQVRDPIERVRKLLLTHDIATEKELKDMEKEIRKEVDDAVAQAKESPIP 362 Query: 354 DPAELYSDILI 364 D +EL++++ + Sbjct: 363 DASELFTNMYV 373 >gi|311067294|ref|YP_003972217.1| acetoin dehydrogenase E1 component TPP-dependent subunit alpha [Bacillus atrophaeus 1942] gi|310867811|gb|ADP31286.1| acetoin dehydrogenase E1 component TPP-dependent alpha subunit [Bacillus atrophaeus 1942] Length = 329 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 130/318 (40%), Positives = 185/318 (58%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L Y+ ML IR FE+K +L+ G++ GF HL G+EAV G+ L +GD + Sbjct: 11 LTEEKALWMYQKMLEIRGFEDKVHELFAEGVLPGFVHLYAGEEAVAAGVCAHLDDGDSIT 70 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + +R HGH +A G D + +MAE+ G+ G+ KGKGGSMH+ G G +GIVG +L Sbjct: 71 STHRGHGHCIAKGCDLNGMMAEIFGKSAGLCKGKGGSMHIADLDKGMLGANGIVGGGFTL 130 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A KY+ ++ + V FGDGA NQG +E N+AA+WNL VI+V ENN Y T Sbjct: 131 ACGSALTAKYKNTNNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVIFVAENNGYGEATPF 190 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S ASA + + R ++N+PG+ VDG DI AV ++AV R +GP +IE +TYR G Sbjct: 191 SYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAVRRARNGEGPSLIECITYRNYG 250 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 H D Y+T+EE E D I+ + LL + E L EIE +V I +VEF Sbjct: 251 HFEGDAQTYKTKEEKAEHLEKRDAIKGFKNYLLQEQ-TDENKLSEIEKHVAHSIKKAVEF 309 Query: 347 AQSDKEPDPAELYSDILI 364 ++ P +EL +D+ + Sbjct: 310 SEESAYPGESELLTDVYV 327 >gi|242072242|ref|XP_002446057.1| hypothetical protein SORBIDRAFT_06g001120 [Sorghum bicolor] gi|241937240|gb|EES10385.1| hypothetical protein SORBIDRAFT_06g001120 [Sorghum bicolor] Length = 431 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 125/354 (35%), Positives = 191/354 (53%), Gaps = 10/354 (2%) Query: 19 PSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMV 78 P + A +S + + +E+ L Y M+L R FE+ Q+Y G + Sbjct: 51 PRLRTALAVSSDLVAGNKAAQAAATHPAVTREEALEVYEDMVLGRVFEDMCAQMYYRGKM 110 Query: 79 GGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK 138 GF HL GQEAV G L + D +++ YR+H H L+ GV +MAEL G+ G + Sbjct: 111 FGFVHLYNGQEAVSTGFIKLLNQADCVVSTYRDHVHALSKGVPPRNVMAELFGKATGCCR 170 Query: 139 GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD---------KICVVCFGD 189 G+GGSMHMFS + GG +G + + TG AFA KYR + + FGD Sbjct: 171 GQGGSMHMFSAPHNLLGGFAFIGEGIPVATGAAFAAKYRHEVLKESGPDGLDVTLAFFGD 230 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 G N GQ +E N+A LW L +++V+ENN +A+G S RA++ K+G SF +PG+ V Sbjct: 231 GTCNNGQFFECLNMAQLWKLPIVFVVENNLWAIGMSHLRATSDPEIWKKGPSFGMPGVHV 290 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHD 309 DGMD+ V+ +A+ R +GP ++E TYR+RGHS++DP R +E + D Sbjct: 291 DGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRKPDEKTHY-AARD 349 Query: 310 PIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 PI ++K ++ A+E +LK IE + ++ +VEFA + P ++L ++ Sbjct: 350 PITALKKYIIEENLATESELKSIEKKIDDVVEEAVEFADASPHPPRSQLLENVF 403 >gi|303321918|ref|XP_003070953.1| Pyruvate dehydrogenase E1 component alpha subunit, putative [Coccidioides posadasii C735 delta SOWgp] gi|240110650|gb|EER28808.1| Pyruvate dehydrogenase E1 component alpha subunit, putative [Coccidioides posadasii C735 delta SOWgp] gi|320040474|gb|EFW22407.1| pyruvate dehydrogenase E1 component alpha subunit [Coccidioides posadasii str. Silveira] Length = 404 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 163/371 (43%), Positives = 226/371 (60%), Gaps = 15/371 (4%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAY 56 +A++ VT A +V A+ ++ D F E +E+ E K++ Y Sbjct: 21 LARRSVTTNAAS-AHADNVPAEDDKPFTIKLSDESF-ETYELDPPPYTLEVTKKELKQMY 78 Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 R M+ IRR E + +LY + GFCHL GQEAV VG++ +L D++ITAYR HG Sbjct: 79 RDMVAIRRMEMASDRLYKEKKIRGFCHLSTGQEAVAVGIEHALDREDKLITAYRCHGFAY 138 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G I+ EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV +G G+AFA KY Sbjct: 139 MRGGTIKSIVGELLGRREGIAYGKGGSMHMFAP--GFYGGNGIVGAQVPVGAGLAFAQKY 196 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 + +GDGA+NQGQV+E+FN+A LWNL VI+ ENN+Y MGT+ +RA+A T++ Sbjct: 197 EGKQNTTICLYGDGASNQGQVFEAFNMAKLWNLPVIFGCENNKYGMGTAANRAAAMTDYY 256 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANY 295 KRG IPG++++GMD+ A+KA + Y A GP++ E +TYRY GHSMSDP Y Sbjct: 257 KRGQY--IPGLKINGMDVLAIKAAVKYGREYTLAGHGPLVFEYVTYRYGGHSMSDPGTTY 314 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREEI MRS +DPI ++ +LL +E +LK I+ R +++ V A+ PD Sbjct: 315 RTREEIQRMRSTNDPIAGLKHKLLDWNVTTEEELKTIDKETRSFVDSEVAEAEKMPVPDA 374 Query: 356 AE--LYSDILI 364 L+ DI + Sbjct: 375 NSRILFEDIYV 385 >gi|66800847|ref|XP_629349.1| pyruvate dehydrogenase E1 alpha subunit [Dictyostelium discoideum AX4] gi|74850753|sp|Q54C70|ODPA_DICDI RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|60462647|gb|EAL60849.1| pyruvate dehydrogenase E1 alpha subunit [Dictyostelium discoideum AX4] Length = 377 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 154/318 (48%), Positives = 211/318 (66%), Gaps = 5/318 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 NK++ +S + M RR E LY ++ GFCHL GQEAV G++ ++T+ D +IT Sbjct: 48 NKDELISFFTEMSRFRRLETVCDGLYKKKLIRGFCHLYTGQEAVCAGLESAITKDDHIIT 107 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR+H ++L+ G +I AEL ++ G SKGKGGSMHMF+ FYGG+GIVGAQ LG Sbjct: 108 AYRDHTYMLSRGATPEEIFAELLMKETGCSKGKGGSMHMFTK--NFYGGNGIVGAQCPLG 165 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIAFA KY ++ +C+ +GDGAANQGQ++E+FN+A+LW L VI++ ENN+Y MGTS Sbjct: 166 AGIAFAQKYNKTGNVCLAMYGDGAANQGQLFEAFNMASLWKLPVIFICENNKYGMGTSQK 225 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGH 287 R++A +F R + G++VDGMD+ AVK A +CRA GPII+EM TYRY GH Sbjct: 226 RSTAGHDFYTR--GHYVAGLKVDGMDVFAVKEAGKYAAEWCRAGNGPIILEMDTYRYVGH 283 Query: 288 SMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 SMSDP YRTREE+N +R DPIE +R+ +L NK A+E L IE VR + + E Sbjct: 284 SMSDPGITYRTREEVNHVRQTRDPIENIRQIILDNKIATEDQLAAIEETVRDEMEKASEK 343 Query: 347 AQSDKEPDPAELYSDILI 364 A + P EL++++ + Sbjct: 344 AIAAPLPQARELFTNVYL 361 >gi|322697184|gb|EFY88967.1| pyruvate dehydrogenase E1 component alpha subunit [Metarhizium acridum CQMa 102] Length = 408 Score = 342 bits (878), Expect = 5e-92, Method: Composition-based stats. Identities = 168/372 (45%), Positives = 234/372 (62%), Gaps = 14/372 (3%) Query: 2 YVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSA 55 +A + VT +L+ SV V D F E +E+ E K++ Sbjct: 23 ALASRSVTTDAASASLHNSVPQSEDEPFQVALSDESF-ETYELDPPSYTIEVTKKELKKM 81 Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M+ IR+ E A +LY + GFCHL GQEAV VG++ ++T+ D +ITAYR HG Sbjct: 82 YYDMVTIRQMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAITKLDDIITAYRCHGFA 141 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G I+ EL GR+ GI+ GKGGSMHMFS GFYGG+GIVGAQV +G G+AFA+K Sbjct: 142 LMRGGTVRSIIGELLGRREGIAYGKGGSMHMFSK--GFYGGNGIVGAQVPVGAGLAFAHK 199 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y S ++ +GDGA+NQGQV+E+FN+A LWNL ++ ENN+Y MGTS +R+SA T++ Sbjct: 200 YNDSKTASIILYGDGASNQGQVFEAFNMAKLWNLPALFGCENNKYGMGTSAARSSALTDY 259 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-AN 294 KRG IPG++V+GMD+ AVKA + + A KGP+++E +TYRY GHSMSDP Sbjct: 260 YKRGQY--IPGLKVNGMDVLAVKAAVKYGKEWTAADKGPMVLEYVTYRYGGHSMSDPGTT 317 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD--KE 352 YRTREEI MRS +DPI +++++L + +E +LK+I+ R +N V A++ E Sbjct: 318 YRTREEIQRMRSTNDPIAGLKQKILDWEVTTEDELKKIDKEARSHVNEEVAIAEAMAVPE 377 Query: 353 PDPAELYSDILI 364 P P+ L+ DI + Sbjct: 378 PKPSILFEDIYV 389 >gi|129048|sp|P26267|ODPA_ASCSU RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha type I, mitochondrial; Short=PDHE1-A; Flags: Precursor gi|159675|gb|AAA29376.1| pyruvate dehydrogenase type I alpha subunit [Ascaris suum] Length = 396 Score = 342 bits (878), Expect = 5e-92, Method: Composition-based stats. Identities = 165/357 (46%), Positives = 220/357 (61%), Gaps = 6/357 (1%) Query: 9 TVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS-EFNKEQELSAYRLMLLIRRFEE 67 TV MA++ +++ A + G +++ KE + Y ML IRR E Sbjct: 13 TVSPSVMAISVRLASTEATFQTKPFKLHKLDSGPDINVHVTKEDAVHYYTQMLTIRRMES 72 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 AG LY V GFCHL GQEA VG K ++ GD +TAYR HG G +K++ Sbjct: 73 AAGNLYKEKKVRGFCHLYSGQEACAVGTKAAMDAGDAAVTAYRCHGWTYLSGSSVAKVLC 132 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 ELTGR G GKGGSMHM+ FYGG+GIVGAQ LGTGIAFA KYR+ +C+ F Sbjct: 133 ELTGRITGNVYGKGGSMHMYGE--NFYGGNGIVGAQQPLGTGIAFAMKYRKEKNVCITMF 190 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGA NQGQ++ES N+A LW+L V+YV ENN Y MGT+ +R+SA T++ RG +PG+ Sbjct: 191 GDGATNQGQLFESMNMAKLWDLPVLYVCENNGYGMGTAAARSSASTDYYTRGDY--VPGI 248 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRS 306 VDGMD+ AV+ + A +C A KGP++IEM TYRY GHSMSDP YRTREE+ E+R Sbjct: 249 WVDGMDVLAVRQAVRWAKEWCNAGKGPLMIEMATYRYSGHSMSDPGTSYRTREEVQEVRK 308 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DPI + +++ +E ++KEI+ VRK I+ +V+ A +DKE + +DI Sbjct: 309 TRDPITGFKDKIVTAGLVTEDEIKEIDKQVRKEIDAAVKQAHTDKESPVELMLTDIY 365 >gi|307709336|ref|ZP_07645794.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis SK564] gi|307619919|gb|EFN99037.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Streptococcus mitis SK564] Length = 322 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 122/321 (38%), Positives = 183/321 (57%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MSTLDKNLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++WNL VI+ NN Y + Sbjct: 121 MGIAVGAALSQQMQNTGKIVVCFFGDGATNEGVFHEAVNMASIWNLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + +R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHQRSAAYGIPGMFIEDGNNVIDVYEGFKKAVDHVRGGNGPVLIESITY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +R L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRNYLIENTIASAEELEEIQALVKEAVET 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+FA+ P + DI Sbjct: 300 SVKFAEESPFPPLESAFEDIY 320 >gi|295658595|ref|XP_002789858.1| pyruvate dehydrogenase E1 component subunit alpha [Paracoccidioides brasiliensis Pb01] gi|226283002|gb|EEH38568.1| pyruvate dehydrogenase E1 component subunit alpha [Paracoccidioides brasiliensis Pb01] Length = 405 Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats. Identities = 160/370 (43%), Positives = 221/370 (59%), Gaps = 14/370 (3%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAYR 57 A + D + +V A +V D F E +E+ E K++ Y Sbjct: 22 AVRRTVTTDAASSHAEAVPADENTPFTVKLSDESF-ETYELDPPPYTLETTKKELKQMYH 80 Query: 58 LMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 M+ IRR E A +LY + GFCHL GQEAV VG++ ++T+ D++ITAYR HG Sbjct: 81 DMVSIRRMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAITKEDKLITAYRCHGFAYM 140 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 G I+ EL GR+ GI+ GKGGSMHMF F+GG+GIVGAQV +G G+AFA +Y Sbjct: 141 RGGTIKSIIGELLGRREGIAYGKGGSMHMF--AKNFFGGNGIVGAQVPVGAGLAFAQQYN 198 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 V +GDGA+NQGQV+E+FN+A L NL I+ ENN+Y MGTS +R+SA T++ K Sbjct: 199 GEKTTTVTLYGDGASNQGQVFEAFNMAKLLNLPCIFGCENNKYGMGTSANRSSALTDYYK 258 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYR 296 RG IPG++++GMD+ A+KA + Y A +GP++ E +TYRY GHSMSDP YR Sbjct: 259 RGQY--IPGLKINGMDVLAIKAAVQYGREYTIAGRGPLVFEYVTYRYGGHSMSDPGTTYR 316 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD-- 354 TREEI MRS +DPI ++++LL SE +LK I+ + R ++ V A+ PD Sbjct: 317 TREEIQRMRSTNDPIAGLKQKLLDWGVTSEEELKGIDKDARNFVDAQVAEAEKMPFPDAT 376 Query: 355 PAELYSDILI 364 P L+ D + Sbjct: 377 PRILFEDTYV 386 >gi|229190875|ref|ZP_04317866.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus ATCC 10876] gi|228592543|gb|EEK50371.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus ATCC 10876] Length = 332 Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 183/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQACWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ PD EL D+ + Sbjct: 311 FSENSPYPDDEELLKDVYV 329 >gi|312073595|ref|XP_003139591.1| pyruvate dehydrogenase E1 component alpha subunit [Loa loa] gi|307765247|gb|EFO24481.1| pyruvate dehydrogenase E1 component alpha subunit [Loa loa] Length = 403 Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats. Identities = 152/364 (41%), Positives = 213/364 (58%), Gaps = 7/364 (1%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFN--KEQELSAYRLML 60 + V V + A A+ + L+ + + ++ L YR M+ Sbjct: 9 IRASKVPVQQQSLVAFSIRLASNEASFQTKPYKLHRLDSGPSTNVSVTRDDALDYYRKMM 68 Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 +IRR E AG LY +V GFCHL GQEA+ VG+ S D +IT+YR H G Sbjct: 69 IIRRMETAAGNLYKERLVRGFCHLYAGQEAIAVGLCASKDSEDAIITSYRCHAWTYLTGS 128 Query: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 ++I++ELTGR+ G GKGGSMHM++ F+GG+GIVGAQ +LG G+AFA+KY Sbjct: 129 GITQILSELTGRRTGNVHGKGGSMHMYNK--NFFGGNGIVGAQQALGAGLAFAHKYNEKK 186 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 + FGDGAANQGQ+YE N+ ALW+L I++ ENN Y MGT RASA T++ RG Sbjct: 187 NVSYTLFGDGAANQGQLYEVINMCALWDLPCIFICENNGYGMGTPAGRASAVTDYYTRGD 246 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTRE 299 IPG+ DGMD+ AV+ T+ + YC A KGP+++E TYRY GHSMSDP YRTR+ Sbjct: 247 Y--IPGIWADGMDVLAVRETIRWSREYCNAGKGPLMLEFATYRYSGHSMSDPGTSYRTRD 304 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELY 359 E+ +MR DPI + +++ +E +LK I+ +RK ++ +V A+++ P LY Sbjct: 305 EVQQMRKTRDPITGFKDKIIAAGLVTEEELKGIDKEIRKEVDAAVNIARTEPSLPPESLY 364 Query: 360 SDIL 363 DI Sbjct: 365 CDIY 368 >gi|23306664|gb|AAN15218.1| pyruvate dehydrogenase E1a-like subunit IAR4 [Arabidopsis thaliana] Length = 393 Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats. Identities = 155/371 (41%), Positives = 224/371 (60%), Gaps = 12/371 (3%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCV---DIPFLE-----GFEVSEFNKEQELS 54 ++ + T + PS + +T S +PF E + E+ L+ Sbjct: 6 LSSRSNTFLKPAITALPSSIRRHVSTDSSPITIETAVPFTSHLCESPSRSVETSSEEILA 65 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 +R M +RR E A LY ++ GFCHL GQEA+ VGM+ ++T+ D +IT+YR+H Sbjct: 66 FFRDMARMRRMEIAADSLYKAKLIRGFCHLYDGQEALAVGMEAAITKKDAIITSYRDHCT 125 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + G +EL GR+ G S GKGGSMH + FYGGHGIVGAQ+ LG G+AFA Sbjct: 126 FIGRGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQIPLGCGLAFAQ 185 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN MGT+ R++ Sbjct: 186 KYNKDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHDGMGTATWRSAKSPA 245 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG +PG++VDGMD AVK A + + GPII+EM TYRY GHSMSDP + Sbjct: 246 YFKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKN-GPIILEMDTYRYHGHSMSDPGS 302 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTR+EI+ +R DPIE+VRK LL + A+E +LK++E +RK ++++V A+ P Sbjct: 303 TYRTRDEISGVRQVRDPIERVRKLLLTHDIATEKELKDMEKEIRKEVDDAVAQAKESPIP 362 Query: 354 DPAELYSDILI 364 D +EL++++ + Sbjct: 363 DASELFTNMYV 373 >gi|146319495|ref|YP_001199207.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Streptococcus suis 05ZYH33] gi|145690301|gb|ABP90807.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Streptococcus suis 05ZYH33] gi|292559113|gb|ADE32114.1| Pyruvate dehydrogenase [Streptococcus suis GZ1] Length = 337 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 127/322 (39%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + KEQ L + M IR + K +L G V G H +G+EA VG LT+ D Sbjct: 16 MVSITKEQHLDMFLKMQQIRDVDMKLNKLVRRGFVQGMTHFSVGEEAAAVGPIAGLTDED 75 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH++A G+D + +MAEL G+ G SKG+GGSMH+ + + G +G +GIVG Sbjct: 76 IIFSHHRGHGHVIAKGIDINGMMAELAGKATGTSKGRGGSMHLANVEKGNFGSNGIVGGG 135 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y +D I + GD A N+G +ES N+AA+WNL VI+ I NN+Y + Sbjct: 136 YALAVGAALTQQYLGTDNIVIAFSGDSATNEGSFHESMNLAAVWNLPVIFFITNNRYGIS 195 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T +S ++ + +R ++ IPG V DG D+ AV M + + Y RA KGP ++E+ +Y Sbjct: 196 TDISYSTKIPHLYQRAAAYGIPGHYVEDGNDVIAVYEKMQEVIEYVRAGKGPAMVEVESY 255 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE+NE ++ DP+++ RK L NK A++ +L IE V + + Sbjct: 256 RWFGHSTADAGVYRTKEEVNEWKAK-DPLKKYRKYLTENKIATDEELDAIEAQVAEQVEA 314 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 SV+FAQ +PD + Y D+ + Sbjct: 315 SVKFAQESPDPDISVAYEDVFV 336 >gi|297850898|ref|XP_002893330.1| IAA-conjugate-resistant 4 [Arabidopsis lyrata subsp. lyrata] gi|297339172|gb|EFH69589.1| IAA-conjugate-resistant 4 [Arabidopsis lyrata subsp. lyrata] Length = 393 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 156/371 (42%), Positives = 224/371 (60%), Gaps = 12/371 (3%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCV---DIPFLE-----GFEVSEFNKEQELS 54 ++ + T + PS + +T S +PF E + E+ L+ Sbjct: 6 LSSRSNTFLKPAITALPSSIRRHVSTDSSPITIETAVPFTSHLCESPSRSVETSSEEILA 65 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 +R M +RR E A LY ++ GFCHL GQEA+ VGM+ ++T D +IT+YR+H Sbjct: 66 FFRDMARMRRMEIAADSLYKAKLIRGFCHLYDGQEALAVGMEAAITRKDAIITSYRDHCT 125 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 + G +EL GR+ G S GKGGSMH + FYGGHGIVGAQ+ LG G+AFA Sbjct: 126 FIGRGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQIPLGCGLAFAQ 185 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY + + + +GDGAANQGQ++E+ NI+ALW+L I V ENN Y MGT+ R++ Sbjct: 186 KYNKDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTATWRSAKSPA 245 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG +PG++VDGMD AVK A + + GPII+EM TYRY GHSMSDP + Sbjct: 246 YFKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKN-GPIILEMDTYRYHGHSMSDPGS 302 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTR+EI+ +R DPIE+VRK LL + A+E +LK++E +RK ++++V A+ P Sbjct: 303 TYRTRDEISGVRQVRDPIERVRKLLLSHDIATEKELKDMEKEIRKEVDDAVAQAKESPVP 362 Query: 354 DPAELYSDILI 364 D +EL++++ + Sbjct: 363 DASELFTNMYV 373 >gi|315045027|ref|XP_003171889.1| pyruvate dehydrogenase E1 component subunit alpha [Arthroderma gypseum CBS 118893] gi|311344232|gb|EFR03435.1| pyruvate dehydrogenase E1 component subunit alpha [Arthroderma gypseum CBS 118893] Length = 405 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 159/371 (42%), Positives = 220/371 (59%), Gaps = 20/371 (5%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEF---------NKEQELSAY 56 + D A + A+ SV D E FE E K++ Y Sbjct: 24 RRSVTTDAASAHAEDIPAEDDKPFSVKLSD----ESFETYELDPPPYTLKTTKKELKQMY 79 Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 M+ IRR E A +LY + GFCHL GQEAV G++ ++T D++ITAYR HG + Sbjct: 80 YDMVSIRRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAITPDDKLITAYRCHGFAM 139 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G I+ EL GR+ GI+ GKGGSMHMF F+GG+GIVGAQV +G G+AFA +Y Sbjct: 140 MRGGTVRSIIGELLGRREGIAYGKGGSMHMF--AKNFFGGNGIVGAQVPVGAGLAFAQQY 197 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 V +GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGT+ +R+SA T++ Sbjct: 198 NGEANTTVCLYGDGASNQGQVFEAFNMAKLWNLPVMFGCENNKYGMGTAANRSSALTDYY 257 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANY 295 KRG IPG++V+GMD+ A+KA + Y + +GP++ E +TYRY GHSMSDP Y Sbjct: 258 KRGQY--IPGIKVNGMDVLAIKAAVQYGREYTVSGQGPLVFEYVTYRYGGHSMSDPGTTY 315 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREEI MRS +DPI ++++LL SE +LK I+ + R +++ V A+ PD Sbjct: 316 RTREEIQRMRSTNDPIAGLKQKLLDWNITSEEELKAIDKDARSMVDEEVAIAEKMPVPDA 375 Query: 356 AE--LYSDILI 364 L+ DI + Sbjct: 376 TSRILFEDIYV 386 >gi|306833256|ref|ZP_07466385.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus bovis ATCC 700338] gi|304424623|gb|EFM27760.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus bovis ATCC 700338] Length = 335 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 126/328 (38%), Positives = 190/328 (57%), Gaps = 3/328 (0%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 +LEG + ++EQ + Y M IR F+ + +L G V G H +G+EA VG Sbjct: 9 YLEG-NMMNLSQEQYIDMYLKMQRIREFDMRINKLVRRGFVQGMTHFSVGEEAASVGAIA 67 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 LT D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG + Sbjct: 68 HLTYDDIIFSNHRGHGQCIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTN 127 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GIVG +L G A Y+++D I V GDGA N+G +ES N+AA W L VI+ I N Sbjct: 128 GIVGGGYALAVGAALTQDYKKTDNIVVAFSGDGATNEGSFHESVNLAATWGLPVIFFIIN 187 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPII 276 N+Y + ++RA+ + R ++ IPG DG D+ AV TM KAV + R+ GP I Sbjct: 188 NRYGISMDITRATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVDHVRSGNGPAI 247 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +E+ +YR+ GHS +D YR++EE+++ DP+ + R L N AS +L I+ V Sbjct: 248 VEVESYRWFGHSTADAGKYRSKEEVDDW-KKKDPLVKFRTYLTENHLASHDELDAIDAQV 306 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDILI 364 K I+++ FAQ+ EPD + + D+ + Sbjct: 307 VKEIDDAYAFAQNSPEPDLSVAFEDVWV 334 >gi|327295747|ref|XP_003232568.1| pyruvate dehydrogenase E1 component alpha subunit [Trichophyton rubrum CBS 118892] gi|326464879|gb|EGD90332.1| pyruvate dehydrogenase E1 component alpha subunit [Trichophyton rubrum CBS 118892] Length = 405 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 158/371 (42%), Positives = 220/371 (59%), Gaps = 20/371 (5%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEF---------NKEQELSAY 56 + D A + + SV D E FE E K++ Y Sbjct: 24 RRSVTTDAASAHAEDIPVEDDKPFSVKLSD----ESFETYELDPPPYTLKTTKKELKQMY 79 Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 M+ IRR E A +LY + GFCHL GQEAV G++ ++T D++ITAYR HG + Sbjct: 80 YDMVSIRRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAITPDDKLITAYRCHGFAM 139 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G I+ EL GR+ GI+ GKGGSMHMF F+GG+GIVGAQV +G G+AFA +Y Sbjct: 140 MRGGTVRSIIGELLGRREGIAYGKGGSMHMF--AKNFFGGNGIVGAQVPVGAGLAFAQQY 197 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 V +GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGT+ +R+SA T++ Sbjct: 198 NGEANTTVCLYGDGASNQGQVFEAFNMAKLWNLPVMFGCENNKYGMGTAANRSSALTDYY 257 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANY 295 KRG IPG++++GMD+ A+KA + Y + +GP++ E +TYRY GHSMSDP Y Sbjct: 258 KRGQY--IPGIKINGMDVLAIKAAVQYGREYTVSGQGPLVFEYVTYRYGGHSMSDPGTTY 315 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD- 354 RTREEI MRS +DPI ++++LL SE +LK I+ + R +++ V A+ PD Sbjct: 316 RTREEIQRMRSTNDPIAGLKQKLLDWNITSEDELKAIDKDARSMVDEEVAIAEKMPVPDA 375 Query: 355 -PAELYSDILI 364 P L+ DI + Sbjct: 376 TPRILFEDIYV 386 >gi|114778875|ref|ZP_01453674.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Mariprofundus ferrooxydans PV-1] gi|114550910|gb|EAU53475.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit [Mariprofundus ferrooxydans PV-1] Length = 349 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 164/317 (51%), Positives = 228/317 (71%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +++E + ML IRRFEEKAGQ+YG+ +GGFCHLC GQEAV VGM+ + D M+ Sbjct: 18 YDEETLHQLHDSMLFIRRFEEKAGQMYGLKKIGGFCHLCNGQEAVCVGMQHAAEPTDYMM 77 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T+YR+HGHILA G D + +MAEL GR GGI KGKGGSMHMF F GG+GIVG QV + Sbjct: 78 TSYRDHGHILARGSDPTAVMAELLGRAGGIVKGKGGSMHMFDVSKNFAGGNGIVGEQVPI 137 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G F++ YR ++ + GDG NQG VYESFN+AALW L +++++ENNQYAMGTS+ Sbjct: 138 GLGFGFSSWYRDDGRVTICIMGDGGINQGAVYESFNMAALWKLPIVFLVENNQYAMGTSL 197 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 RASA+T KRG+SF IPGM++DGMD+ + M +A+A+ R+ +GPI++E +TYRYRG Sbjct: 198 ERASAETQLFKRGISFKIPGMKIDGMDVLEFEKKMREAIAHARSGEGPILVEAMTYRYRG 257 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTR E++E R+ DPI +++ +++ A+E KE + +++K + + Sbjct: 258 HSMSDPATYRTRAEVDEWRTGRDPIARLQAQMIEAGLATEESFKEKDRDIKKEVVAVAKA 317 Query: 347 AQSDKEPDPAELYSDIL 363 A++ EPD +EL++D+ Sbjct: 318 AEAQPEPDASELWTDVY 334 >gi|126273604|ref|XP_001387270.1| alpha subunit of pyruvate dehydrogenase [Scheffersomyces stipitis CBS 6054] gi|126213140|gb|EAZ63247.1| alpha subunit of pyruvate dehydrogenase [Pichia stipitis CBS 6054] Length = 396 Score = 341 bits (876), Expect = 8e-92, Method: Composition-based stats. Identities = 154/370 (41%), Positives = 218/370 (58%), Gaps = 17/370 (4%) Query: 8 VTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEG------FEVSEFN----KEQELSAYR 57 + ++ V A+RA SS D V I E E+ E KE L Y+ Sbjct: 2 LRTAAVRPLKGGVVIARRAMASSSDLVSIELPESSFEGYNLEIPELTFETEKETLLKMYK 61 Query: 58 LMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 M++IRR E + LY + GFCHL +GQEA+ VG++ ++T D +IT+YR HG Sbjct: 62 DMIIIRRMEMASDALYKAKKIRGFCHLSVGQEAIAVGIENAITPEDTVITSYRCHGFAFM 121 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 G +++ EL G++ G+S GKGGSMHMF+ GFYGG+GIVGAQV LG G+AF++KYR Sbjct: 122 RGASVKEVLGELMGKRSGVSYGKGGSMHMFAP--GFYGGNGIVGAQVPLGAGLAFSHKYR 179 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 +GDGA+NQGQV+E++N+A LWNL I+ ENN+Y MGT+ +R+SA T + K Sbjct: 180 GQKAAAFTLYGDGASNQGQVFEAYNMAKLWNLPCIFACENNKYGMGTAAARSSAITEYYK 239 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYR 296 RG IPG++++GMD+ A A + GP+++E TYRY GHSMSDP YR Sbjct: 240 RGQY--IPGLKINGMDVLATYQASKFAKDWAAQGNGPLVLEYETYRYGGHSMSDPGTTYR 297 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV--EFAQSDKEPD 354 TREE+ MRS +DPI ++ LL A+E ++K + RK ++ V A + E Sbjct: 298 TREEVQHMRSRNDPIAGLKATLLDKGIATEEEIKSYDKAARKYVDEQVAAAEADAPPEAK 357 Query: 355 PAELYSDILI 364 L+ D+ + Sbjct: 358 MDILFEDVYV 367 >gi|254579515|ref|XP_002495743.1| ZYRO0C02024p [Zygosaccharomyces rouxii] gi|238938634|emb|CAR26810.1| ZYRO0C02024p [Zygosaccharomyces rouxii] Length = 401 Score = 341 bits (876), Expect = 9e-92, Method: Composition-based stats. Identities = 157/352 (44%), Positives = 215/352 (61%), Gaps = 17/352 (4%) Query: 26 AATSSVDCVDIPFLEG------FEVSEF----NKEQELSAYRLMLLIRRFEEKAGQLYGM 75 +A+ D ++I E V E K L ++ M IRR E LY Sbjct: 26 SASEESDLIEIELPETSFEGYNLNVPELKYTTTKGNLLQMFKDMTTIRRMEMACDALYKA 85 Query: 76 GMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGG 135 + GFCHL +GQEA+ VG++ ++T+ D +IT+YR HG G I+AEL G++ G Sbjct: 86 KKIWGFCHLSVGQEAIAVGIENAITKKDTVITSYRCHGFAHMRGSPVKDILAELMGKKSG 145 Query: 136 ISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQG 195 S GKGGSMH+F+ NGFYGG+GIVGAQV LG G+AFA++Y+ D +GDGAANQG Sbjct: 146 CSFGKGGSMHIFT--NGFYGGNGIVGAQVPLGAGLAFAHQYKNEDNCNFALYGDGAANQG 203 Query: 196 QVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIR 255 QV+ES+N+A L+NL V++ ENN+Y MGT+ SRASA T + KR IPG++V+GMDI Sbjct: 204 QVFESYNMAKLFNLPVVFCCENNRYGMGTAASRASASTEYFKRAGY--IPGLKVNGMDIL 261 Query: 256 AVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQV 314 AV A +C + GP+++E TYRY GHS+SDP YRTREEI MRS +DPI + Sbjct: 262 AVYQASKFAKDWCLSGNGPLVLEYETYRYGGHSISDPGTTYRTREEIQHMRSKNDPIAGL 321 Query: 315 RKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP--DPAELYSDILI 364 + +L A+E +LK E RK ++ VE A S P +P ++ D+ + Sbjct: 322 KMHMLQLGLATEEELKAYEKAARKYVDEQVELADSSAAPGYEPELMFEDVYL 373 >gi|255654123|ref|ZP_05399532.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile QCD-23m63] gi|296449838|ref|ZP_06891605.1| pyruvate dehydrogenase complex E1 component alpha subunit [Clostridium difficile NAP08] gi|296877902|ref|ZP_06901922.1| pyruvate dehydrogenase complex E1 component alpha subunit [Clostridium difficile NAP07] gi|296261325|gb|EFH08153.1| pyruvate dehydrogenase complex E1 component alpha subunit [Clostridium difficile NAP08] gi|296431099|gb|EFH16926.1| pyruvate dehydrogenase complex E1 component alpha subunit [Clostridium difficile NAP07] Length = 320 Score = 341 bits (876), Expect = 9e-92, Method: Composition-based stats. Identities = 123/317 (38%), Positives = 188/317 (59%), Gaps = 1/317 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE L Y+ M R+FEEK + GMV G HL +GQEA V M+L +GD + Sbjct: 3 ISKETLLEMYKRMNQARKFEEKVSWFFARGMVHGTTHLSVGQEASSVAAVMALEKGDLVS 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +R H + G+D +K+MAEL G++ G KGKGGSMH+ ++G G +G+VG +++ Sbjct: 63 LTHRGHSQFIGMGIDLNKMMAELMGKETGFCKGKGGSMHIADIESGNLGANGVVGGGLTI 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A +Y+++ KI + FGDGA+N+G +E N++++W L +I+ ENN Y M TS+ Sbjct: 123 APGAALTQQYKKTGKIVLCSFGDGASNEGTFHEGINLSSIWKLPIIFYCENNLYGMSTSI 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R + + R S+ I G+ +DG + V T+ KA CR +GP++IE TYR+ G Sbjct: 183 KRHMNIESIATRAASYGIEGISIDGYNPIEVYETVQKAAEKCRRGEGPVLIESRTYRWLG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS SD YRT+EEI ++ DPIE +R L+ N ++E +L +I+ ++ I ++VEF Sbjct: 243 HSKSDANVYRTKEEIESWKAK-DPIEFLRNYLIENNLSNEDELDKIQEFAKQSIEDAVEF 301 Query: 347 AQSDKEPDPAELYSDIL 363 AQ+ P L D+ Sbjct: 302 AQNSPNPKIESLLEDVY 318 >gi|312143273|ref|YP_003994719.1| Pyruvate dehydrogenase (acetyl-transferring) [Halanaerobium sp. 'sapolanicus'] gi|311903924|gb|ADQ14365.1| Pyruvate dehydrogenase (acetyl-transferring) [Halanaerobium sp. 'sapolanicus'] Length = 328 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 121/321 (37%), Positives = 184/321 (57%), Gaps = 6/321 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 +KE+ + ML+IR FE K + + G + GF HL +G+EAV VG +L E D + + Sbjct: 4 SKEELVELLEKMLVIREFETKVQKHFAEGEIPGFVHLYLGEEAVAVGACSALKEDDFITS 63 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 +R HGH+LA G D K+MAE+ G+ G +KGKGGSMH+ G G +GIVGA + + Sbjct: 64 THRGHGHLLARGGDIKKMMAEIFGKATGYNKGKGGSMHIADVSLGILGANGIVGAGLPIA 123 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV- 226 G + + D + + FGDGA+N+G +E+ N+A++WNL V++V ENN Y + Sbjct: 124 AGSGISAQILNKDSVTICFFGDGASNRGTFHEAINMASVWNLPVVFVCENNLYGISMPQY 183 Query: 227 ----SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + S R V++ I G+ VDG D+ AV + +AV RA GP +IE TY Sbjct: 184 TNDKRKGQNIQDVSDRAVAYGISGVTVDGNDVMAVNEAVVEAVKKARAGGGPSLIECKTY 243 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+RGH DP YR+ EE+ + DPI++ K L + + K++ V+ I Sbjct: 244 RHRGHFEGDPTVYRSDEEVKRWKEK-DPIDRFVKVLKDQEVLDDDGYKKLRQEVKGRIEE 302 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 +++FAQ EPDP+E+ +D+ Sbjct: 303 ALQFAQESPEPDPSEVTTDVY 323 >gi|254973687|ref|ZP_05270159.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile QCD-66c26] gi|255091078|ref|ZP_05320556.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile CIP 107932] gi|255099194|ref|ZP_05328171.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile QCD-63q42] gi|255304977|ref|ZP_05349149.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile ATCC 43255] gi|255312732|ref|ZP_05354315.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile QCD-76w55] gi|255515493|ref|ZP_05383169.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile QCD-97b34] gi|255648585|ref|ZP_05395487.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile QCD-37x79] gi|306518712|ref|ZP_07405059.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile QCD-32g58] Length = 320 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 122/317 (38%), Positives = 188/317 (59%), Gaps = 1/317 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE L Y+ M R+FEEK + GMV G HL +GQEA V M+L +GD + Sbjct: 3 ISKETLLEMYKRMNQARKFEEKVSWFFARGMVHGTTHLSVGQEASSVAAVMALEKGDLVS 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +R H + G+D +K+MAEL G++ G KGKGGSMH+ ++G G +G+VG +++ Sbjct: 63 LTHRGHSQFIGMGIDLNKMMAELMGKETGFCKGKGGSMHIADIESGNLGANGVVGGGLTI 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A +Y+++ KI + FGDGA+N+G +E N++++W L +I+ ENN Y M TS+ Sbjct: 123 APGAALTQQYKKTGKIVLCSFGDGASNEGTFHEGINLSSIWKLPIIFYCENNLYGMSTSI 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R + + R S+ I G+ +DG + V T+ KA CR +GP++IE TYR+ G Sbjct: 183 KRHMNIESIATRAASYGIEGISIDGYNPIEVYETVQKAAEKCRRGEGPVLIESRTYRWLG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS SD YRT+EEI ++ DPIE ++ L+ N ++E +L +I+ ++ I ++VEF Sbjct: 243 HSKSDANVYRTKEEIESWKAK-DPIEFLKNYLIENNLSNEDELDKIQEFAKQSIEDAVEF 301 Query: 347 AQSDKEPDPAELYSDIL 363 AQ+ P L D+ Sbjct: 302 AQNSPNPKIESLLEDVY 318 >gi|300866455|ref|ZP_07111147.1| pyruvate dehydrogenase (lipoamide) [Oscillatoria sp. PCC 6506] gi|300335559|emb|CBN56307.1| pyruvate dehydrogenase (lipoamide) [Oscillatoria sp. PCC 6506] Length = 344 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 143/336 (42%), Positives = 212/336 (63%), Gaps = 10/336 (2%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 +P + V + +KE+ L Y M+L R FE+K ++Y G + GF HL GQEAV G+ Sbjct: 7 LPVFDSARV-KISKEEGLMLYEDMVLGRFFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGV 65 Query: 96 KMSLT-EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 ++ + D + + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMH+FS ++ Sbjct: 66 IRAMRRDEDYVSSTYRDHVHALSAGVPAREVMAELFGKATGCSKGRGGSMHIFSAEHNLL 125 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALW 207 GG+ V + + TG AFA+KYRR D++ FGDGAAN GQ +E N+AALW Sbjct: 126 GGYAFVAEGIPVATGAAFASKYRREALGNENADQVTACFFGDGAANNGQFFECLNMAALW 185 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 L +IYV+ENN++A+G + RA++ K+ +F + G +VDGMD+ AV+ +AVA Sbjct: 186 KLPIIYVVENNKWAIGMAHDRATSDPVIYKKAHAFGMAGFEVDGMDVLAVREVAQEAVAR 245 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 RA +GP +IE LTYR+RGHS++DP R++EE E DPI+++ L A+ Sbjct: 246 ARAGEGPTLIEALTYRFRGHSLADPDELRSKEE-KEYWFPRDPIKKLAADLTERNLATVE 304 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +LKEIE ++ +++++VEFA+ EPDP+ELY I Sbjct: 305 ELKEIEQKIQALVDDAVEFAEKSPEPDPSELYRFIY 340 >gi|324509582|gb|ADY44026.1| Pyruvate dehydrogenase E1 component subunit alpha type I [Ascaris suum] Length = 396 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 164/357 (45%), Positives = 219/357 (61%), Gaps = 6/357 (1%) Query: 9 TVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS-EFNKEQELSAYRLMLLIRRFEE 67 TV MA++ +++ A + G +++ KE + Y M IRR E Sbjct: 13 TVSPSVMAISVRLASTEATFQTKPFKLHKLDSGPDINVHVTKEDAVHYYTQMQTIRRMES 72 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 AG LY V GFCHL GQEA VG K ++ GD +TAYR HG G +K++ Sbjct: 73 AAGNLYKEKKVRGFCHLYSGQEACAVGTKAAMDAGDAAVTAYRCHGWTYLSGSSVAKVLC 132 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 ELTGR G GKGGSMHM+ FYGG+GIVGAQ LGTGIAFA KYR+ +C+ F Sbjct: 133 ELTGRITGNVYGKGGSMHMYGE--NFYGGNGIVGAQQPLGTGIAFAMKYRKEKNVCITMF 190 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGA NQGQ++ES N+A LW+L V+YV ENN Y MGT+ +R+SA T++ RG +PG+ Sbjct: 191 GDGATNQGQLFESMNMAKLWDLPVLYVCENNGYGMGTAAARSSASTDYYTRGDY--VPGI 248 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRS 306 VDGMD+ AV+ + A +C A KGP++IEM TYRY GHSMSDP YRTREE+ E+R Sbjct: 249 WVDGMDVLAVRQAVRWAKEWCNAGKGPLMIEMATYRYSGHSMSDPGTSYRTREEVQEVRK 308 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DPI + +++ +E ++KEI+ VRK I+ +V+ A +DKE + +DI Sbjct: 309 TRDPITGFKDKIVTAGLVTEDEIKEIDKQVRKEIDAAVKQAHTDKESPVELMLTDIY 365 >gi|12003246|gb|AAG43499.1|AF209924_1 pyruvate dehydrogenase [Solanum lycopersicum] Length = 391 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 157/374 (41%), Positives = 231/374 (61%), Gaps = 13/374 (3%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCV----DIPFL-----EGFEVSEFNKEQ 51 M ++ +K + +R ++ S + +PF E + + Sbjct: 1 MALSTSRAINHIMKPLSRAVCATRRLSSDSTATITVETSLPFTSHNVDPPSRSVETSPME 60 Query: 52 ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 ++ ++ M +RR E A LY ++ GFCHL GQEAV VGM+ ++T+ D +ITAYR+ Sbjct: 61 LMTFFKDMTEMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCIITAYRD 120 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 H L G + AEL GR+ G S+GKGGSMH + ++GFYGGHGIVGAQV LG G+A Sbjct: 121 HCIFLGRGGTLVESFAELMGRRDGCSRGKGGSMHFYKKESGFYGGHGIVGAQVPLGIGLA 180 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 FA KY++ D + +GDGAANQGQ++E+ N+AALW+L I V ENN Y MGT+ RA+ Sbjct: 181 FAQKYKKEDYVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAK 240 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 + KRG +PG++VDGMD+ AVK A + + GPII+EM TYRY GHSMSD Sbjct: 241 SPAYYKRGDY--VPGLRVDGMDVFAVKQACAFAKQHALKN-GPIILEMDTYRYHGHSMSD 297 Query: 292 P-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 P + YRTR+EI+ +R DP+E++R +L + A+E +LK+IE RK+++ ++ A+ Sbjct: 298 PGSTYRTRDEISGVRQERDPVERIRSLILAHNIATEAELKDIEKENRKVVDEAIRKAKES 357 Query: 351 KEPDPAELYSDILI 364 PDP+EL++++ + Sbjct: 358 PMPDPSELFTNVYV 371 >gi|20806712|ref|NP_621883.1| thiamine pyrophosphate-dependent dehydrogenase, E1 component alpha subunit [Thermoanaerobacter tengcongensis MB4] gi|20515167|gb|AAM23487.1| Thiamine pyrophosphate-dependent dehydrogenases, E1 component alpha subunit [Thermoanaerobacter tengcongensis MB4] Length = 333 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 134/318 (42%), Positives = 189/318 (59%), Gaps = 1/318 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 EF+KE+ L Y+ M+ IR+FE K +LY M+ G HL +G+EA VG +L D + Sbjct: 12 EFSKEKLLWMYKKMVQIRQFELKTDELYKKNMIWGTYHLYVGEEAAAVGACAALEPTDYI 71 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D ++MAEL G++ G KG+GGSMH+ G G +GIV + Sbjct: 72 TSTHRGHGHTIAKGADLKRMMAELLGKETGHCKGRGGSMHIADIFTGHLGANGIVAGGIP 131 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 + TG A A+K R ++ + FGDGAAN G ES N+AA+W L V+Y ENNQYAM Sbjct: 132 IATGAALASKLRGDKRVTLCFFGDGAANTGAFNESLNMAAIWQLPVVYFCENNQYAMSAP 191 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V++ +A N + R S+N+PG+ VDG D+ V + +AV R +GP +IE TYR+ Sbjct: 192 VNKFTAVKNIADRAASYNMPGVIVDGNDVLEVYKAVKEAVDRARKGEGPTLIEAKTYRWF 251 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GHS SDP YRTREE E DPI++ ++LL A+E +LK+I+ V K I + + Sbjct: 252 GHSKSDPRVYRTREEEEEW-KKKDPIKRFAEKLLSEGVATEEELKKIDEEVAKEIEEAYQ 310 Query: 346 FAQSDKEPDPAELYSDIL 363 FA EP +L + Sbjct: 311 FAVESPEPKVEDLAKYVY 328 >gi|294102573|ref|YP_003554431.1| Pyruvate dehydrogenase (acetyl-transferring) [Aminobacterium colombiense DSM 12261] gi|293617553|gb|ADE57707.1| Pyruvate dehydrogenase (acetyl-transferring) [Aminobacterium colombiense DSM 12261] Length = 334 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 127/325 (39%), Positives = 191/325 (58%) Query: 40 EGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSL 99 V +F+KE S Y M+ IR FEEK + + G + GF HL IG+EAV G+ +L Sbjct: 10 PAIPVRDFDKETLRSLYETMVKIRHFEEKVEEFFFAGEIPGFVHLYIGEEAVAAGVMANL 69 Query: 100 TEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGI 159 + D + + +R HGH +A G D +MAE+ G++ G KGKGGSMH+ G G +GI Sbjct: 70 RKTDYIQSTHRGHGHTIAKGADLKPMMAEIFGKKSGYCKGKGGSMHIADFSIGMLGANGI 129 Query: 160 VGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 VG +L G A A K + +D + VV FGDGA+N+G +E N+AA W L VI+V ENN Sbjct: 130 VGGGFTLAAGAALAQKMQGTDGVSVVFFGDGASNRGTFHEGINLAAAWKLPVIFVCENNH 189 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A T +A N + R + ++IPG+ VDG D+ AV + + R GP ++E Sbjct: 190 WASTTPYHTTTAVENIADRALGYDIPGVIVDGNDVFAVYEAAQELIERARRGSGPALLEA 249 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR +GH + DP YRT+EE+ ++ DPI + ++++ S+ +L IE V++ Sbjct: 250 KTYRIKGHFVGDPEKYRTKEEVQKVFDETDPIPRFEQKVIEGGVMSKEELTAIEEAVKRS 309 Query: 340 INNSVEFAQSDKEPDPAELYSDILI 364 + +VEFA++ EP+P EL+ D+ + Sbjct: 310 VAEAVEFARNAPEPEPFELFEDLYV 334 >gi|307151582|ref|YP_003886966.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Cyanothece sp. PCC 7822] gi|306981810|gb|ADN13691.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cyanothece sp. PCC 7822] Length = 344 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 143/325 (44%), Positives = 204/325 (62%), Gaps = 9/325 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQM 105 + L Y M+L R FE+K ++Y G + GF HL GQEAV G+ +L D + Sbjct: 17 ITASEGLMLYEDMVLGRMFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGIIKALRPDEDYV 76 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + YR+H H L+CG+ A ++MAEL G++ G SKG+GGSMH+FS K+ GG V + Sbjct: 77 CSTYRDHVHALSCGIPAREVMAELFGKETGCSKGRGGSMHLFSEKHRLLGGFAFVSEGIP 136 Query: 166 LGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + TG AF KYRR D++ FGDGA+N GQ +E N+AALW L +IYV+ENN Sbjct: 137 VATGAAFQTKYRRDALGDETADQVTTCFFGDGASNNGQFFECLNMAALWKLPIIYVVENN 196 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 ++A+G + +RA++Q K+ FN+PG++VDGMD+ AV+ +A+A RA +GP +IE Sbjct: 197 KWAIGMAHNRATSQPEVYKKASVFNMPGIEVDGMDVLAVRTVAKEAIARARAGEGPTLIE 256 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 LTYR+RGHS++DP R+ +E + S DPI ++ LL + AS+ DL +IE V+ Sbjct: 257 ALTYRFRGHSLADPDELRSSDE-KQFWSARDPISRLGSYLLEHDLASQEDLTQIEKKVQG 315 Query: 339 IINNSVEFAQSDKEPDPAELYSDIL 363 II +V FA+ KEPDP+EL I Sbjct: 316 IIEEAVTFAEQSKEPDPSELRRYIF 340 >gi|229070255|ref|ZP_04203506.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus F65185] gi|228712873|gb|EEL64797.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus F65185] Length = 332 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 181/319 (56%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTHSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+ EE E + D I RK L+H +E +L ++E V + S+E Sbjct: 251 GHFEGEAQTYKISEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ PD EL D+ + Sbjct: 311 FSENSPYPDDEELLKDVYV 329 >gi|328793432|ref|XP_623502.3| PREDICTED: probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like isoform 1 [Apis mellifera] Length = 387 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 163/340 (47%), Positives = 223/340 (65%), Gaps = 7/340 (2%) Query: 27 ATSSVDCVDIPFLEGFEVSEFN--KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 A+ + L+ ++ K++ + Y+ + IRR E AG LY +V GFCHL Sbjct: 24 ASFETKPFRLHKLDNGPSTQITVTKDEAIELYKKLHTIRRMETAAGNLYKEKIVRGFCHL 83 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 GQEA VG+K +L D +ITAYR HG G++ ++AELTG++GG +KGKGGSM Sbjct: 84 YSGQEACAVGIKAALRPQDCVITAYRAHGWTYLMGIEPFGVLAELTGKKGGNAKGKGGSM 143 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+ + FYGG+GIVGAQV LG GIAFA+KY + +CV +GDGAANQGQV+E +N+A Sbjct: 144 HMY--SDNFYGGNGIVGAQVPLGVGIAFAHKYNNTGGVCVTLYGDGAANQGQVFEVYNMA 201 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 LW++ I+V ENN Y MGTSV RASA T++ RG IPG+ VDGMD+ AVK A Sbjct: 202 KLWDVPCIFVCENNGYGMGTSVDRASASTDYYTRGDY--IPGIWVDGMDVLAVKQATKFA 259 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKW 323 + YC + KGPI++E +TYRY GHSMSDP YRTREEI E+R DPI ++R+L+ Sbjct: 260 IDYCTSGKGPIVLETVTYRYSGHSMSDPGTSYRTREEIQEVRQTRDPITGFKERILNANL 319 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + ++K IE +RK ++++V+ A++D E EL +DI Sbjct: 320 ITPEEIKTIENEIRKQVDDAVKAAKTDTEIPLNELTADIY 359 >gi|326803867|ref|YP_004321685.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Aerococcus urinae ACS-120-V-Col10a] gi|326650212|gb|AEA00395.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Aerococcus urinae ACS-120-V-Col10a] Length = 357 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 113/329 (34%), Positives = 180/329 (54%) Query: 35 DIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVG 94 DI EV + ++ + Y+ M IR FE+ + + G + GF HL G+EA+ G Sbjct: 27 DIKTASDVEVKAMSPDKAKAIYKTMNEIRDFEDTVHRFFAQGEIPGFVHLYAGEEAIASG 86 Query: 95 MKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 + LT+ D + + +R HGH +A G D +MAE+ G++ G+ KGKGGSMH+ G Sbjct: 87 VCAHLTDDDYITSTHRGHGHCVAKGGDLKGMMAEIFGKETGLGKGKGGSMHIADLDKGIL 146 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYV 214 G +G+VG L G A NKY ++D + V FGDGA+N+G +E N+A++W L VI+V Sbjct: 147 GANGMVGGGFGLAVGAAMRNKYLKTDSVAVCFFGDGASNEGLFHECLNMASIWQLPVIFV 206 Query: 215 IENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGP 274 ENN +A T +S ++R ++N+PG++VDG D+ AV +A+ R GP Sbjct: 207 NENNFFAESTPQWYSSGSETIAERAAAYNMPGVRVDGKDLMAVYEAAGEAIDRARQGGGP 266 Query: 275 IIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 +IE + YR GH D Y+ + ++ D I+ + + + AS+ +L+EIE Sbjct: 267 SLIECVAYRNYGHFEGDEQKYKALSGPEKEWADRDAIQVFKDYAIEHGLASQEELEEIEA 326 Query: 335 NVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++ I +VE+A+ P L +D+ Sbjct: 327 QAKQDIEEAVEYAKESPIPAAENLLTDVF 355 >gi|306831144|ref|ZP_07464305.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426710|gb|EFM29821.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 334 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 126/328 (38%), Positives = 190/328 (57%), Gaps = 3/328 (0%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 +LEG + ++EQ + Y M IR F+ + +L G V G H +G+EA VG Sbjct: 8 YLEG-NMMNLSQEQYIDMYLKMQRIREFDMRINKLVRRGFVQGMTHFSVGEEAASVGAMA 66 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 LT D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG + Sbjct: 67 HLTYDDIIFSNHRGHGQCIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTN 126 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GIVG +L G A Y+++D I V GDGA N+G +ES N+AA W L VI+ I N Sbjct: 127 GIVGGGYALAVGAALTQHYQKTDNIVVAFSGDGATNEGSFHESVNLAATWGLPVIFFIIN 186 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPII 276 N+Y + ++RA+ + R ++ IPG DG D+ AV TM KAV + R+ GP I Sbjct: 187 NRYGISMDITRATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVDHVRSGNGPAI 246 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +E+ +YR+ GHS +D YR++EE+++ DP+ + R L N AS +L I+ V Sbjct: 247 VEVESYRWFGHSTADAGKYRSKEEVDDW-KKKDPLVKFRTYLTENHLASHDELDAIDAQV 305 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDILI 364 K I+++ FAQ+ EPD + + D+ + Sbjct: 306 VKEIDDAYAFAQNSPEPDLSVAFEDVWV 333 >gi|146321687|ref|YP_001201398.1| pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Streptococcus suis 98HAH33] gi|145692493|gb|ABP92998.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Streptococcus suis 98HAH33] Length = 337 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 128/322 (39%), Positives = 193/322 (59%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + KEQ L + M IR + K +L G V G H +G+EA VG LT+ D Sbjct: 16 MVSITKEQHLDMFLKMQQIRDVDMKLNKLVRRGFVQGMTHFSVGEEAAAVGPIAGLTDED 75 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH++A G+D + +MAEL G+ G SKG+GGSMH+ + + G +G +GIVG Sbjct: 76 IIFSHHRGHGHVIAKGIDINGMMAELAGKATGTSKGRGGSMHLANVEKGNFGSNGIVGGG 135 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y +D I + GD A N+G +ES N+AA+WNL VI+ I NN+Y M Sbjct: 136 YALAVGAALTQQYLGTDNIVIAFSGDSATNEGSFHESMNLAAVWNLPVIFFITNNRYGMS 195 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T +S ++ + +R ++ IPG V DG D+ AV M + + Y RA KGP ++E+ +Y Sbjct: 196 TDISYSTKIPHLYQRAAAYGIPGHYVEDGNDVIAVYEKMQEVIEYVRAGKGPAMVEVESY 255 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE+NE ++ DP+++ RK L NK A++ +L IE V + + Sbjct: 256 RWFGHSTADAGVYRTKEEVNEWKAK-DPLKKYRKYLTENKIATDEELDAIEAQVAEQVEA 314 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 SV+FAQ +PD + Y D+ + Sbjct: 315 SVKFAQESPDPDISVAYEDVFV 336 >gi|218248868|ref|YP_002374239.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [Cyanothece sp. PCC 8801] gi|257061930|ref|YP_003139818.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Cyanothece sp. PCC 8802] gi|218169346|gb|ACK68083.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cyanothece sp. PCC 8801] gi|256592096|gb|ACV02983.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Cyanothece sp. PCC 8802] Length = 344 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 139/326 (42%), Positives = 209/326 (64%), Gaps = 9/326 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-DQ 104 KE+ L Y M+L R FE+K ++Y G + GF HL GQEA+ G+ +L G D Sbjct: 16 NITKEEGLLLYEDMMLGRLFEDKCAEMYYRGRMFGFVHLYNGQEAISTGIIKALRSGEDY 75 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + YR+H H L+CGV A ++MAEL G++ G SKG+GGSMH+FS ++ GG+ V + Sbjct: 76 VSSTYRDHVHALSCGVPAREVMAELFGKETGCSKGRGGSMHLFSAQHRLLGGYAFVAEGI 135 Query: 165 SLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 + G AF +KYRR D++ V FGDGA+N GQ +E N++ALW L +IYV+EN Sbjct: 136 PVAMGAAFQSKYRREAMGDPNADQVTVCFFGDGASNNGQFFECLNMSALWKLPIIYVVEN 195 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N++A+G + RA++Q K+ F++ G++VDGMD+ AV++ +A+A RA +GP +I Sbjct: 196 NKWAIGMAHDRATSQPEIYKKASVFSMAGVEVDGMDVLAVRSVAQEAIARARAGEGPTLI 255 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E LTYR+RGHS++DP R +E + DPI ++ L+ + A+ +LK+IE V+ Sbjct: 256 EALTYRFRGHSLADPDELRAPDE-KQFWGARDPITKLATYLVEHNLANSQELKDIEKRVQ 314 Query: 338 KIINNSVEFAQSDKEPDPAELYSDIL 363 + IN +V+FA++ EPDP+ELY I Sbjct: 315 ETINEAVQFAENSPEPDPSELYRYIF 340 >gi|170583545|ref|XP_001896631.1| probable pyruvate dehydrogenase E1 component alpha subunit, mitochondrial [Brugia malayi] gi|158596155|gb|EDP34554.1| probable pyruvate dehydrogenase E1 component alpha subunit, mitochondrial, putative [Brugia malayi] Length = 403 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 154/344 (44%), Positives = 209/344 (60%), Gaps = 7/344 (2%) Query: 23 AKRAATSSVDCVDIPFLEGFEVSEFN--KEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 A A+ + LE + + + L YR M++IRR E AG LY +V G Sbjct: 29 ASNEASFQTKPYKLHRLESGPSTNISVTRNDALDYYRKMVVIRRMETAAGNLYKERLVRG 88 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA+ VG+ S D +IT+YR H G S+I++ELTGR+ G GK Sbjct: 89 FCHLYAGQEAIAVGLCASKDNEDAIITSYRCHAWTYLTGSGISQILSELTGRRTGNVYGK 148 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM++ F+GG+GIVGAQ +LG G+AFA+KY + + FGDGAANQGQ+YE Sbjct: 149 GGSMHMYNK--NFFGGNGIVGAQQALGAGLAFAHKYNKKKNVSYTLFGDGAANQGQLYEV 206 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 N+ ALW+L I++ ENN Y MGT RASA T++ RG IPG+ DGMD+ AV+ T Sbjct: 207 INMCALWDLPCIFICENNGYGMGTPADRASAVTDYYTRGDY--IPGVWADGMDVLAVRET 264 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + + YC A KGP+++E TYRY GHSMSDP YRTR+E+ +MR DPI R +++ Sbjct: 265 IRWSKEYCNAGKGPLMLEFATYRYSGHSMSDPGTSYRTRDEVQQMRKTCDPITGFRDKII 324 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ASE +LK I+ +K ++ +V A+++ P LY DI Sbjct: 325 AAGLASEEELKGIDKEAKKEVDAAVNIARTEPPLPPESLYCDIY 368 >gi|296413130|ref|XP_002836269.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630082|emb|CAZ80460.1| unnamed protein product [Tuber melanosporum] Length = 401 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 154/335 (45%), Positives = 212/335 (63%), Gaps = 12/335 (3%) Query: 33 CVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVI 92 +D P E +K + Y M+ IRR E A +LY + GFCHL GQEAV Sbjct: 55 MIDGPSTELS----VSKNELKKMYSDMVTIRRMEMAADKLYKEKKIRGFCHLSTGQEAVA 110 Query: 93 VGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG 152 G++ ++T DQ+ITAYR HG L G I+AEL GR+ GI+ GKGGSMHMF+ G Sbjct: 111 AGVEHAITPDDQVITAYRCHGFALMRGASVKSIIAELLGRREGIAYGKGGSMHMFTK--G 168 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 FYGG+GIVGAQV +G GI FA KY +GDGA+NQGQV+E++N+A LW++ V+ Sbjct: 169 FYGGNGIVGAQVPVGAGIGFAMKYLGRPNTTFALYGDGASNQGQVFEAYNMAKLWDIPVV 228 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHK 272 + ENN+Y MGTS +R+SA T++ KRG IPG++V+GMD+ AVK A + + K Sbjct: 229 FACENNKYGMGTSANRSSALTDYYKRGQY--IPGLKVNGMDVLAVKQASAYAKEHTISGK 286 Query: 273 GPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKE 331 GP+++E +TYRY GHSMSDP YRTREE+ MRS DPI+ +++++L SE +LK Sbjct: 287 GPMVMEFVTYRYGGHSMSDPGTTYRTREEVQRMRSTQDPIQGLKQKILEWG-ISEDELKA 345 Query: 332 IEMNVRKIINNSVEFAQSDKEPDP--AELYSDILI 364 +E + ++ V+ A+ PDP L+ DI + Sbjct: 346 LEKEAKASVDEEVKKAEEAPVPDPTSKTLFEDIYV 380 >gi|229128118|ref|ZP_04257100.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BDRD-Cer4] gi|228655393|gb|EEL11249.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus BDRD-Cer4] Length = 332 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 184/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKAVDEAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ PD EL D+ + Sbjct: 311 FSENSPYPDDEELLKDVYV 329 >gi|158297863|ref|XP_318026.4| AGAP004786-PA [Anopheles gambiae str. PEST] gi|157014531|gb|EAA13136.4| AGAP004786-PA [Anopheles gambiae str. PEST] Length = 397 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 160/340 (47%), Positives = 211/340 (62%), Gaps = 7/340 (2%) Query: 27 ATSSVDCVDIPFLEGFEVSE--FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + LE ++ KE L Y M IRR E AG LY ++ GFCHL Sbjct: 33 ATFETRAFKLHNLEEGPSTKVTLTKEDALKYYGQMYTIRRMETAAGNLYKEKVIRGFCHL 92 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 GQEA VGM+ ++ D ITAYR HG GV ++AELTGR G ++GKGGSM Sbjct: 93 YSGQEACAVGMRAAMRPEDSCITAYRCHGWTYLMGVSPVGVLAELTGRSSGCARGKGGSM 152 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+ FYGG+GIVGAQV LG GI FA KY + C+ +GDGAANQGQ++E +N+A Sbjct: 153 HMYGK--NFYGGNGIVGAQVPLGVGIGFAAKYNGTQGACIALYGDGAANQGQLFEVYNMA 210 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 LWN I+V ENN Y MGTS RASA TN+ RG +PG+ VDGMD+ AV+ A Sbjct: 211 KLWNAPCIFVCENNGYGMGTSAERASANTNYYTRGDF--VPGIWVDGMDVLAVREATRFA 268 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKW 323 + + + KGPI++E TYRY GHSMSDP YR+R+EI E+R DPI +R+++L + Sbjct: 269 LEHTSSGKGPILMETATYRYSGHSMSDPGTSYRSRDEIAEVRQTRDPITSLREKILTTEL 328 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 A+ +LKEIE +R ++++ + A++DKE EL +DI Sbjct: 329 ATVEELKEIEGKIRAEVDSATKVAKTDKEISVDELTADIY 368 >gi|262282299|ref|ZP_06060067.1| acetoin dehydrogenase [Streptococcus sp. 2_1_36FAA] gi|262261590|gb|EEY80288.1| acetoin dehydrogenase [Streptococcus sp. 2_1_36FAA] Length = 322 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 120/321 (37%), Positives = 181/321 (56%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K L +R M IRR + K QL G V G H +G+EA VG ++L D Sbjct: 1 MATLDKSLLLEMFRKMEEIRRMDLKIAQLVKKGKVPGMTHFSVGEEAANVGAMLALNADD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + +MAE+ G+ G KGKGGSMH+ G G +GIVG Sbjct: 61 LITSNHRGHGQAIAKGIDLNGMMAEILGKYTGTCKGKGGSMHIADLDAGNLGANGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + G A + + + + KI V FGDGA N+G +E+ N+A++W L VI+ NN Y + Sbjct: 121 MGIAVGAALSQQIQHTGKIVVCFFGDGATNEGVFHEAVNMASIWKLPVIFYCINNGYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + + + + R ++ IPGM + DG ++ V KAV + R GP++IE +TY Sbjct: 181 ADIKKMTNVEHIHHRSAAYGIPGMFIEDGNNVIDVYEGFQKAVDHVRGGNGPVLIESVTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS SDP YRTREE+ E+ DPIE +RK L+ N AS +L+EI+ V++ + Sbjct: 241 RWLGHSSSDPGKYRTREEV-ELWKQKDPIENLRKYLIENNIASAEELEEIQAQVKEAVEA 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 SV+ A+ P + DI Sbjct: 300 SVKSAEESPFPPLESAFEDIY 320 >gi|242092600|ref|XP_002436790.1| hypothetical protein SORBIDRAFT_10g008820 [Sorghum bicolor] gi|241915013|gb|EER88157.1| hypothetical protein SORBIDRAFT_10g008820 [Sorghum bicolor] Length = 395 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 160/346 (46%), Positives = 220/346 (63%), Gaps = 8/346 (2%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 +++ + + VD P E + + LS +R M L+RR E A LY ++ Sbjct: 37 AITVETSVPFKSHIVDAPSREATTTAR----ELLSFFRDMSLMRRAEIAADSLYKAKLIR 92 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL GQEAV VGM+ ++T D +ITAYR+H LA G D AEL GR+ G S+G Sbjct: 93 GFCHLYDGQEAVAVGMEAAITRADAIITAYRDHCAYLARGGDLVAAFAELMGRRDGCSRG 152 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMH + F+GGHGIVGAQV LG GIAFA +YR+ + +GDGAANQGQ++E Sbjct: 153 KGGSMHFYKRDANFFGGHGIVGAQVPLGCGIAFAQRYRKEGTVTFDLYGDGAANQGQLFE 212 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 + N+AALW L V+ V ENN Y MGT+ RAS + KRG +PG++VDGMD+ AVK Sbjct: 213 ALNMAALWKLPVVLVCENNHYGMGTAEWRASKSPAYYKRGDY--VPGLKVDGMDVLAVKQ 270 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRL 318 A + GPII+EM TYRY GHSMSDP + YRTR EI +R DPIE+VRK + Sbjct: 271 ACKFAKEHV-LENGPIILEMDTYRYHGHSMSDPGSTYRTRNEIAGIRQERDPIERVRKLI 329 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 L +++A+ +LK++E +RK ++ ++ A+ PDP+EL++++ + Sbjct: 330 LAHEFATAQELKDMEKEIRKQVDAAIAKAKESPMPDPSELFTNVYV 375 >gi|11465733|ref|NP_053877.1| pyruvate dehydrogenase E1 component alpha subunit [Porphyra purpurea] gi|1709450|sp|P51267|ODPA_PORPU RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha gi|1276733|gb|AAC08153.1| pyruvate dehydrogenase E1 component, alpha subunit [Porphyra purpurea] Length = 344 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 134/341 (39%), Positives = 204/341 (59%), Gaps = 13/341 (3%) Query: 32 DCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAV 91 V++P ++ K + L Y MLL R FE+ Q+Y G + GF HL GQEAV Sbjct: 5 KKVELPLTNCNQI-NLTKHKLLVLYEDMLLGRNFEDMCAQMYYKGKMFGFVHLYNGQEAV 63 Query: 92 IVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKN 151 G+ L D + + YR+H H L+ GV + +MAEL G++ G S+G+GGSMH+FS + Sbjct: 64 STGVIKLLDSKDYVCSTYRDHVHALSKGVPSQNVMAELFGKETGCSRGRGGSMHIFSAPH 123 Query: 152 GFYGGHGIVGAQVSLGTGIAFANKYRRSD-------KICVVCFGDGAANQGQVYESFNIA 204 F GG + + + TG AF + YR+ ++ FGDG N GQ +E N+A Sbjct: 124 NFLGGFAFIAEGIPVATGAAFQSIYRQQVLKEPGELRVTACFFGDGTTNNGQFFECLNMA 183 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 LW L +I+V+ENNQ+A+G + R+S+ K+ +F +PG++VDGMD+ AV+ +KA Sbjct: 184 VLWKLPIIFVVENNQWAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQVAEKA 243 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWA 324 V R +GP +IE LTYR+RGHS++DP R+R+E + DPI++++K +L N+ A Sbjct: 244 VERARQGQGPTLIEALTYRFRGHSLADPDELRSRQEKEAWVA-RDPIKKLKKHILDNQIA 302 Query: 325 SEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE----LYSD 361 S +L +I+ +V+ + SVEFA S EP+ +E L++D Sbjct: 303 SSDELNDIQSSVKIDLEQSVEFAMSSPEPNISELKRYLFAD 343 >gi|326502500|dbj|BAJ95313.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326504470|dbj|BAJ91067.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 419 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 123/326 (37%), Positives = 187/326 (57%), Gaps = 10/326 (3%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +E+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L + D ++ Sbjct: 67 VTREEALELYEDMILGRNFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKQLNQPDCVV 126 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++MAEL G+ G +G+GGSMHMFS + GG +G + + Sbjct: 127 STYRDHVHALSKGVPAREVMAELFGKATGCCRGQGGSMHMFSEPHNLLGGFAFIGEGIPV 186 Query: 167 GTGIAFANKYRRSD---------KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 TG AFA KYR + + FGDG N GQ +E N+A LW L +I+V+EN Sbjct: 187 ATGAAFAAKYRHEVLKQSSPGGLDVTLAFFGDGTCNNGQFFECLNMAQLWKLPIIFVVEN 246 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIII 277 N +A+G S R+++ K+G +F +PG+ VDGMD+ V+ +A+ R +GP ++ Sbjct: 247 NLWAIGMSHLRSTSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIDRARRGEGPTLV 306 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E TYR+RGHS++DP R +E + + DPI ++K ++ ASE +LK IE + Sbjct: 307 ECETYRFRGHSLADPDELRRPDEKSHY-AARDPITSLKKYIIEQNLASEAELKSIEKKID 365 Query: 338 KIINNSVEFAQSDKEPDPAELYSDIL 363 ++ +VEFA + P ++L ++ Sbjct: 366 DVVEEAVEFADASPLPPRSQLLENVF 391 >gi|126697602|ref|YP_001086499.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Clostridium difficile 630] gi|260681805|ref|YP_003213090.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Clostridium difficile CD196] gi|260685402|ref|YP_003216535.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Clostridium difficile R20291] gi|115249039|emb|CAJ66850.1| Acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Clostridium difficile] gi|260207968|emb|CBA60107.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile CD196] gi|260211418|emb|CBE01506.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit [Clostridium difficile R20291] Length = 322 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 122/317 (38%), Positives = 188/317 (59%), Gaps = 1/317 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 +KE L Y+ M R+FEEK + GMV G HL +GQEA V M+L +GD + Sbjct: 5 ISKETLLEMYKRMNQARKFEEKVSWFFARGMVHGTTHLSVGQEASSVAAVMALEKGDLVS 64 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +R H + G+D +K+MAEL G++ G KGKGGSMH+ ++G G +G+VG +++ Sbjct: 65 LTHRGHSQFIGMGIDLNKMMAELMGKETGFCKGKGGSMHIADIESGNLGANGVVGGGLTI 124 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G A +Y+++ KI + FGDGA+N+G +E N++++W L +I+ ENN Y M TS+ Sbjct: 125 APGAALTQQYKKTGKIVLCSFGDGASNEGTFHEGINLSSIWKLPIIFYCENNLYGMSTSI 184 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R + + R S+ I G+ +DG + V T+ KA CR +GP++IE TYR+ G Sbjct: 185 KRHMNIESIATRAASYGIEGISIDGYNPIEVYETVQKAAEKCRRGEGPVLIESRTYRWLG 244 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS SD YRT+EEI ++ DPIE ++ L+ N ++E +L +I+ ++ I ++VEF Sbjct: 245 HSKSDANVYRTKEEIESWKAK-DPIEFLKNYLIENNLSNEDELDKIQEFAKQSIEDAVEF 303 Query: 347 AQSDKEPDPAELYSDIL 363 AQ+ P L D+ Sbjct: 304 AQNSPNPKIESLLEDVY 320 >gi|321259728|ref|XP_003194584.1| pyruvate dehydrogenase e1 component alpha subunit, mitochondrial precursor [Cryptococcus gattii WM276] gi|317461056|gb|ADV22797.1| Pyruvate dehydrogenase e1 component alpha subunit, mitochondrial precursor, putative [Cryptococcus gattii WM276] Length = 413 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 147/324 (45%), Positives = 208/324 (64%), Gaps = 5/324 (1%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 + K++ +S Y M+ +RR E+ A LY ++ GFCHL IGQEAV VGM+ ++ Sbjct: 70 PPPETTVTKDELVSMYHTMVQMRRMEQAADALYKQKLIRGFCHLAIGQEAVSVGMETAID 129 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 + D++IT+YR H + G ++AEL GR+ G+S GKGGSMH+F+ F+GG+GIV Sbjct: 130 DKDRVITSYRCHTFAVLRGGTIKGVLAELMGRKDGMSFGKGGSMHIFTP--TFFGGNGIV 187 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQV +G G+A A KY + +GDGA+NQGQV+E+FN+A LWNL ++V ENN+Y Sbjct: 188 GAQVPVGAGVALAQKYNKEKAATFALYGDGASNQGQVFEAFNMAKLWNLPCVFVCENNKY 247 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 MGTS R+S T F RG IPG+QV+GMDI AV+ A + + KGP+++E + Sbjct: 248 GMGTSAERSSMNTQFFTRGDK--IPGLQVNGMDILAVREATKWAKDWVTSGKGPLLMEFV 305 Query: 281 TYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRY GHSMSDP YRTREE+ +MRS+ D I ++K +L E LK I+ + ++ Sbjct: 306 TYRYGGHSMSDPGTTYRTREEVQQMRSSQDAIAGLKKYILEWGVTDEASLKAIDKSAKEE 365 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 ++ +VE A+ PD E +SDI Sbjct: 366 VDAAVEEAKKSPVPDQVEFWSDIY 389 >gi|119480165|ref|XP_001260111.1| pyruvate dehydrogenase [Neosartorya fischeri NRRL 181] gi|119408265|gb|EAW18214.1| pyruvate dehydrogenase [Neosartorya fischeri NRRL 181] Length = 400 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 161/360 (44%), Positives = 213/360 (59%), Gaps = 16/360 (4%) Query: 17 LNPSVSAKRAATSSVDCVDIPFLE-GFEVSEF---------NKEQELSAYRLMLLIRRFE 66 L V+ + T D+P E FE F K Q + Y+ ML IRR E Sbjct: 27 LAQVVNVENVPTEDDKPFDVPIPEDSFETYHFDHPPYTVGTTKRQLKNMYQDMLTIRRLE 86 Query: 67 EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIM 126 A LY + GFCHL GQEAV VG++ +++ D++ITAYR HG G I+ Sbjct: 87 LAADALYKQKKIRGFCHLSTGQEAVAVGIEYGISKEDKLITAYRSHGFTFMRGGSIKSIV 146 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 EL GRQ GIS GKGGSMHMF GF+GG+GIVGA V +G GIAFA +Y D + V Sbjct: 147 GELLGRQDGISHGKGGSMHMFCE--GFFGGNGIVGAHVPVGAGIAFAQQYNNRDNVTVDV 204 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPG 246 +GDGAANQGQV+E+FN+A LWNL V++ ENN+Y MGTS RASA T++ KRG+ IPG Sbjct: 205 YGDGAANQGQVHEAFNMAKLWNLPVLFGCENNKYGMGTSAERASAMTDYYKRGLY--IPG 262 Query: 247 MQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRS 306 ++V+GMD+ AV A + + RA KGP++ E +TYRY GHSMSDP E + Sbjct: 263 LRVNGMDVLAVMAAVKHGREFIRAGKGPLVYEYVTYRYAGHSMSDPGVAYRTREELKAER 322 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AELYSDILI 364 DP+ R++L+ +E + K I+ NVR +N+ V A+ EP+P L+ DI + Sbjct: 323 ASDPVSNFREQLIDWGIITEDEAKTIDKNVRGKVNHEVAEAEKMPEPEPRLDVLFQDIYV 382 >gi|242807555|ref|XP_002484980.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Talaromyces stipitatus ATCC 10500] gi|218715605|gb|EED15027.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Talaromyces stipitatus ATCC 10500] Length = 407 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 160/360 (44%), Positives = 219/360 (60%), Gaps = 21/360 (5%) Query: 22 SAKRAATSSVDCVDIPFL-----EGFEVSEF---------NKEQELSAYRLMLLIRRFEE 67 +A A + + D PF E FE E K++ Y M+ IRR E Sbjct: 33 AASAHAENIPEEDDKPFTVRLSDESFETYELDPPPYTLETTKKELKQMYYDMVAIRRMEM 92 Query: 68 KAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMA 127 + +LY + GFCHL GQEAV VG++ ++T D++ITAYR HG L G ++ Sbjct: 93 ASDRLYKEKKIRGFCHLSTGQEAVAVGIEHAITPEDKLITAYRCHGFALMRGGTVKSVIG 152 Query: 128 ELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCF 187 EL GR+ GI+ GKGGSMHMF+ F+GG+GIVGAQV +G G+AFA +Y + + Sbjct: 153 ELLGRREGIAYGKGGSMHMFAP--NFFGGNGIVGAQVPVGAGLAFAQQYNGEKTCSIALY 210 Query: 188 GDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGM 247 GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGTS +R+SA T++ KRG IPG+ Sbjct: 211 GDGASNQGQVFEAFNMAKLWNLPVLFGCENNKYGMGTSAARSSALTDYYKRGQY--IPGI 268 Query: 248 QVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRS 306 +V+GMD+ A+KA + Y A KGP++ E +TYRY GHSMSDP YR+REEI MRS Sbjct: 269 KVNGMDVLAIKAAVQYGREYAIAGKGPLVYEYVTYRYGGHSMSDPGTTYRSREEIQRMRS 328 Query: 307 NHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD--KEPDPAELYSDILI 364 HD I ++++LL +E +LK I+ R ++ V A+ EP P LY DI + Sbjct: 329 THDAIAGLKQKLLDWSVVTEEELKAIDKEARSFVDEEVAEAEKMAPPEPTPRILYEDIFV 388 >gi|169863671|ref|XP_001838454.1| pyruvate dehydrogenase e1 component alpha subunit [Coprinopsis cinerea okayama7#130] gi|116500493|gb|EAU83388.1| pyruvate dehydrogenase e1 component alpha subunit [Coprinopsis cinerea okayama7#130] Length = 407 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 151/361 (41%), Positives = 215/361 (59%), Gaps = 10/361 (2%) Query: 5 KQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRR 64 +T A P + D P L+ K + L Y M ++RR Sbjct: 35 TTQLTGKPSDPATEPYTLRLHEDSFKTYKCDAPSLDVS----ITKSELLQMYSEMQVMRR 90 Query: 65 FEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASK 124 E + LY ++ GFCHL GQEAV VG++ + + D++IT YR H + G Sbjct: 91 MEMASDALYKAKLIRGFCHLATGQEAVSVGLEHGIKKDDRVITGYRCHPFAVLRGGTVEG 150 Query: 125 IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 ++AEL GRQ G+S GKGGSMH+F+ F+GG+GIVGAQV +G G AFA KY+ Sbjct: 151 VIAELLGRQAGMSHGKGGSMHIFTP--TFFGGNGIVGAQVPVGAGAAFAQKYKGEKHCTF 208 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 +GDGA+NQGQV+E+FN+A LWNL ++V ENN+Y MGTS R+S+ T + RG I Sbjct: 209 ALYGDGASNQGQVFEAFNMAKLWNLPCVFVCENNKYGMGTSAERSSSNTEYYTRGDK--I 266 Query: 245 PGMQVDGMDIRAVKATMDKAVAY-CRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEIN 302 PG+QV+GMDI A K ++ A + KGP+I+E +TYRY GHSMSDP YRTREE+ Sbjct: 267 PGIQVNGMDIIATKQAVEYARNWTVNDDKGPLILEFITYRYGGHSMSDPGTTYRTREEVQ 326 Query: 303 EMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 MRS DPI +++ L A+E +LK ++ + + +++ +VE A++ EP+ +L++DI Sbjct: 327 RMRSTQDPIRGLQRYLEEWGVATEQELKALDKDAKAVVDKAVEIAKASPEPEIKDLWTDI 386 Query: 363 L 363 Sbjct: 387 Y 387 >gi|226495171|ref|NP_001140222.1| hypothetical protein LOC100272256 [Zea mays] gi|194698556|gb|ACF83362.1| unknown [Zea mays] Length = 392 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 166/363 (45%), Positives = 227/363 (62%), Gaps = 14/363 (3%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLI 62 + + V+ + ++ SV K VD P E + + + LS +R M L+ Sbjct: 23 LLARGVSDSADAVTVDTSVPFKSH------IVDPPPRE----ATTSARELLSFFRDMSLM 72 Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RRFE A LY ++ GFCHL GQEAV VGM+ + T D +ITAYR+H LA G D Sbjct: 73 RRFEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAATRADAIITAYRDHCAYLARGGDP 132 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 AEL GR+ G S+GKGGSMH + F+GGHGIVGAQV LG GIAFA +YR+ + Sbjct: 133 VAAFAELMGRRDGCSRGKGGSMHFYKRDANFFGGHGIVGAQVPLGCGIAFAQRYRKEGTV 192 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 +GDGAANQGQ++E+ N+AALW L VI V ENN Y MGT+ RAS + KRG Sbjct: 193 TFDLYGDGAANQGQLFEALNMAALWKLPVILVCENNHYGMGTAEWRASKSPAYYKRGDY- 251 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEI 301 +PG++VDGMD+ AVK A + GPII+EM TYRY GHSMSDP + YRTR+EI Sbjct: 252 -VPGLKVDGMDVLAVKQACKFAKEHA-LENGPIILEMDTYRYHGHSMSDPGSTYRTRDEI 309 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 +R DPIE+VRK +L +++A+ +LK++E +RK ++ ++ A+ PDP+EL+++ Sbjct: 310 AGIRQERDPIERVRKLMLVHEFATAQELKDMEKEIRKQVDAAIAKAKECPLPDPSELFTN 369 Query: 362 ILI 364 + + Sbjct: 370 VYV 372 >gi|75762698|ref|ZP_00742535.1| Acetoin dehydrogenase E1 component alpha-subunit [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489819|gb|EAO53198.1| Acetoin dehydrogenase E1 component alpha-subunit [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 332 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 183/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQAHWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL GR G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGRATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ P+ EL D+ + Sbjct: 311 FSENSPYPEDEELLKDVYV 329 >gi|224100211|ref|XP_002311788.1| predicted protein [Populus trichocarpa] gi|222851608|gb|EEE89155.1| predicted protein [Populus trichocarpa] Length = 393 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 167/364 (45%), Positives = 233/364 (64%), Gaps = 13/364 (3%) Query: 11 GDIKMALNPSVSAKRAATSSVDCVDI----PFL-----EGFEVSEFNKEQELSAYRLMLL 61 ++ L + S +R ++S D + I PF E N ++ S +R+M Sbjct: 13 SNLVKPLATAFSLRRQISTSTDPITIETSVPFATHRCDPPSRTVETNPQELQSFFRVMAT 72 Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 +RR E A LY ++ GFCHL GQEAV VGM+ ++T+ D +ITAYR+H L G Sbjct: 73 MRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKNDSIITAYRDHCTFLGRGGT 132 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 ++ +EL GRQGG SKGKGGSMH + +GFYGGHGIVGAQV LG G+AFA+KY + D Sbjct: 133 LLEVFSELMGRQGGCSKGKGGSMHFYKKDSGFYGGHGIVGAQVPLGCGLAFAHKYNKDDA 192 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 + +GDGAANQGQ++E+ NI+ALW+L +I V ENN Y MGT+ RA+ + KRG Sbjct: 193 VAFALYGDGAANQGQLFEALNISALWDLPIILVCENNHYGMGTAEWRAAKSPAYYKRGDY 252 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREE 300 +PG++VDGMD AVK A + GPII+EM TYRY GHSMSDP + YRTR+E Sbjct: 253 --VPGLKVDGMDAFAVKQACKFAKEHALK-SGPIILEMDTYRYHGHSMSDPGSTYRTRDE 309 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 I+ +R DPIE++RK +L + A+E +LK+IE VRK ++ ++ A+ PDP+EL++ Sbjct: 310 ISGVRQERDPIERIRKLILTHDLATEKELKDIEKEVRKQVDEAIAQAKESPMPDPSELFT 369 Query: 361 DILI 364 ++ + Sbjct: 370 NVYV 373 >gi|226290429|gb|EEH45913.1| pyruvate dehydrogenase E1 component subunit alpha [Paracoccidioides brasiliensis Pb18] Length = 405 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 159/373 (42%), Positives = 219/373 (58%), Gaps = 20/373 (5%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEF---------NKEQELS 54 A + D + +V A +V D E FE E K++ Sbjct: 22 AVRRTVTTDAASSHAEAVPADENTPFTVKLSD----ESFETYELDPPPYTLQTTKKELKQ 77 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y M+ IRR E A +LY + GFCHL GQEAV VG++ ++T+ D++ITAYR HG Sbjct: 78 MYHDMVSIRRMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAITKEDKLITAYRCHGF 137 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G I+ EL GR+ GI+ GKGGSMHMF F+GG+GIVGAQV +G G+AFA Sbjct: 138 AYMRGGTIKSIIGELLGRREGIAYGKGGSMHMF--AKNFFGGNGIVGAQVPVGAGLAFAQ 195 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 +Y V +GDGA+NQGQV+E+FN+A L NL I+ ENN+Y MGTS +R+SA T+ Sbjct: 196 QYNGEKTTTVTLYGDGASNQGQVFEAFNMAKLLNLPCIFGCENNKYGMGTSANRSSALTD 255 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++++GMD+ A+KA + Y A +GP++ E +TYRY GHSMSDP Sbjct: 256 YYKRGQY--IPGLKINGMDVLAIKAAVQYGREYTIAGRGPLVFEYVTYRYGGHSMSDPGT 313 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTREEI MRS +DPI ++++LL SE +LK I+ + R ++ V A+ P Sbjct: 314 TYRTREEIQRMRSTNDPIAGLKQKLLDWGVTSEEELKGIDKDARNFVDGQVAEAEKMPFP 373 Query: 354 D--PAELYSDILI 364 + P L+ D + Sbjct: 374 EATPRILFEDTYV 386 >gi|193629643|ref|XP_001950931.1| PREDICTED: probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like [Acyrthosiphon pisum] Length = 395 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 156/340 (45%), Positives = 213/340 (62%), Gaps = 7/340 (2%) Query: 27 ATSSVDCVDIPFLEGFE--VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 AT + + LE KE ++ Y+ M IRR E AG LY +V GFCHL Sbjct: 31 ATFDIKAFKLHKLESGPNTTVTVTKEDAINYYKQMQYIRRIETAAGNLYKEKIVRGFCHL 90 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 GQEA VGMK + + D +I+AYR HG G ++++ELTGR GG+ +GKGGSM Sbjct: 91 YSGQEACAVGMKSAFRDQDSIISAYRVHGWTYLMGAKPVEVLSELTGRIGGVVRGKGGSM 150 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+ FYGG+GIVGAQV LGTGIA A +Y + +C +GDGA+NQGQV+E++N+A Sbjct: 151 HMYGK--NFYGGNGIVGAQVPLGTGIALAAQYLGTGGVCFTLYGDGASNQGQVFEAYNMA 208 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 LWNL ++V ENN YAMGTS R+++ T++ RG IPG+ VDGMD+ AV+ A Sbjct: 209 KLWNLPCVFVCENNGYAMGTSSERSASNTSYYTRGDY--IPGIWVDGMDVLAVREASKFA 266 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKW 323 V +C GPI++E +TYRY GHSMSDP YRTREEI +R DPI ++++L Sbjct: 267 VDHCVNGNGPILLETVTYRYSGHSMSDPGTSYRTREEIQAVRMTRDPITSFKEKILSTNL 326 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 A+ DLK+I+ ++ I+ +V ++ D+E EL SD+ Sbjct: 327 ATVDDLKKIDNEIKIEIDQAVIKSKEDEEITLDELASDVY 366 >gi|197103266|ref|YP_002128644.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, alpha subunit [Phenylobacterium zucineum HLK1] gi|196480542|gb|ACG80069.1| pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase, alpha subunit [Phenylobacterium zucineum HLK1] Length = 352 Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats. Identities = 188/314 (59%), Positives = 241/314 (76%) Query: 51 QELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYR 110 L M LIRRFEE+AGQLYGMG++GGFCHL IGQEAV VG+ EGDQ+IT+YR Sbjct: 35 TLLHDVEQMSLIRRFEERAGQLYGMGLIGGFCHLYIGQEAVAVGVVGVRAEGDQVITSYR 94 Query: 111 EHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGI 170 +HG+ LACG+D + +MAELTGR GG S+GKGGSMH+F+ + GFYGGHGIVGAQVSLG+G+ Sbjct: 95 DHGYALACGMDPAAMMAELTGRIGGASRGKGGSMHIFAPEKGFYGGHGIVGAQVSLGSGL 154 Query: 171 AFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRAS 230 AFAN+YR DK+ V FG+GAANQGQVYESFN+AALW L +Y+IENN+YAMGT+ R++ Sbjct: 155 AFANRYRNQDKVAFVVFGEGAANQGQVYESFNMAALWKLPAVYIIENNRYAMGTAAERSA 214 Query: 231 AQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMS 290 ++T F +RG+SF IPG +VDGMD+ AV+ +A A+ RA KGP ++EM TYRYRGHSMS Sbjct: 215 SETRFYRRGLSFGIPGEEVDGMDVEAVREATSRAAAHARAGKGPYLLEMKTYRYRGHSMS 274 Query: 291 DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD 350 DPA YR+REE++E+R DPIE+ R+R+L A L +I+ V+ + +VEFAQ+ Sbjct: 275 DPAKYRSREEVDEVRRAKDPIERARQRILDLDPAQAHSLAQIDARVKAEVERAVEFAQTA 334 Query: 351 KEPDPAELYSDILI 364 EP EL SD+ + Sbjct: 335 PEPPARELLSDVYV 348 >gi|163754145|ref|ZP_02161268.1| pyruvate dehydrogenase E1 component alpha subunit [Kordia algicida OT-1] gi|161326359|gb|EDP97685.1| pyruvate dehydrogenase E1 component alpha subunit [Kordia algicida OT-1] Length = 332 Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats. Identities = 141/321 (43%), Positives = 200/321 (62%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EG 102 + + KE L Y ML R+FE+K +Y V GF HL GQEAV+ G ++ Sbjct: 1 MEKITKEIYLKWYEDMLFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVLAGSLHAMDLSK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H + GVD K+MAEL G+ G S+G GGSMH+F+ +NGFYGGHGIVG Sbjct: 61 DKMITAYRNHVQPIGMGVDPKKVMAELYGKATGTSQGLGGSMHIFAPENGFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG G+AFA+KY + + + + GDGA QG ++E+FN+A W L V+++ ENN YAM Sbjct: 121 QIPLGAGLAFADKYFKRNAVTLCYMGDGAVRQGSLHETFNMAMNWKLPVVFICENNGYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R + T+ K G+ + +P VDGM+ V + +AV R GP +EM TY Sbjct: 181 GTSVERTANHTDIWKLGLGYEMPCGPVDGMNPEKVAEAVHEAVERARRGDGPTFLEMKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YRT++E+ E DPI QV++ LL K+A+E ++ E++ V+ ++ Sbjct: 241 RYRGHSMSDAQHYRTKDEVAEY-KKIDPITQVKETLLEKKYATEDEIAEMDKRVKDLVKE 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 +FA+ PD + +Y + Sbjct: 300 CEKFAEESPYPDKSLMYDAVY 320 >gi|58269082|ref|XP_571697.1| pyruvate dehydrogenase e1 component alpha subunit, mitochondrial precursor [Cryptococcus neoformans var. neoformans JEC21] gi|134112674|ref|XP_774880.1| hypothetical protein CNBF0450 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257528|gb|EAL20233.1| hypothetical protein CNBF0450 [Cryptococcus neoformans var. neoformans B-3501A] gi|57227932|gb|AAW44390.1| pyruvate dehydrogenase e1 component alpha subunit, mitochondrial precursor, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 413 Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats. Identities = 149/324 (45%), Positives = 208/324 (64%), Gaps = 5/324 (1%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 + K++ ++ YR M+ +RR E+ A LY ++ GFCHL IGQEAV VGM+ ++T Sbjct: 70 PPPETTVTKDELINMYRTMVQMRRMEQAADALYKQKLIRGFCHLAIGQEAVSVGMETAIT 129 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D++IT+YR H + G ++AEL GR+ G+S GKGGSMH+F+ F+GG+GIV Sbjct: 130 GQDRVITSYRCHTFAVLRGGTIKGVIAELMGRKDGMSFGKGGSMHIFTPS--FFGGNGIV 187 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQV +G G+A A KY + +GDGAANQGQV+E+FN+A LWNL ++V ENN+Y Sbjct: 188 GAQVPVGAGVALAQKYNKEKAATFALYGDGAANQGQVFEAFNMAKLWNLPCVFVCENNKY 247 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 MGTS R+S T F RG IPG+QV+GMDI AV+ A + + KGP+++E + Sbjct: 248 GMGTSAERSSMNTQFFTRGD--QIPGLQVNGMDILAVREATKWAREWATSGKGPLLVEFV 305 Query: 281 TYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRY GHSMSDP YRTREE+ +MRS+ D I ++K +L E LK I+ ++ Sbjct: 306 TYRYGGHSMSDPGTTYRTREEVQQMRSSQDAIAGLKKYILEWGATDEASLKAIDKAAKEE 365 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 ++ +VE A+ PD E +SDI Sbjct: 366 VDAAVEEAKQSPFPDQVEFWSDIY 389 >gi|228959011|ref|ZP_04120712.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar pakistani str. T13001] gi|228800672|gb|EEM47588.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus thuringiensis serovar pakistani str. T13001] Length = 332 Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats. Identities = 129/319 (40%), Positives = 182/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE + YR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMIYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEGLLTESELVDMEKAVDDAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ PD EL D+ + Sbjct: 311 FSENSPYPDDEELLKDVYV 329 >gi|224107863|ref|XP_002314631.1| predicted protein [Populus trichocarpa] gi|222863671|gb|EEF00802.1| predicted protein [Populus trichocarpa] Length = 393 Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats. Identities = 164/362 (45%), Positives = 229/362 (63%), Gaps = 13/362 (3%) Query: 12 DIKMALNPSVSAKRAATSSVDC----VDIPFL-----EGFEVSEFNKEQELSAYRLMLLI 62 + L + S +R ++S D IPF + + ++ LS +R M + Sbjct: 14 NFLKPLATAFSLRRPISTSTDPLTIETSIPFTTHRCDPPSRTVDTSPQELLSFFRDMATM 73 Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR E A LY ++ GFCHL GQEAV VGM+ ++T+ D +ITAYR+H L G Sbjct: 74 RRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDSIITAYRDHCTFLGRGGTL 133 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 +I +EL GRQGG S GKGGSMH + +GFYGGHGIVGAQV LG G+AFA+KY + D + Sbjct: 134 LEIFSELMGRQGGCSSGKGGSMHFYKKNSGFYGGHGIVGAQVPLGCGLAFAHKYNKDDAV 193 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 +GDGAANQGQ++E+ NI+ALW+L +I V ENN Y MGT+ RA+ + KRG Sbjct: 194 AFALYGDGAANQGQLFEALNISALWDLPIILVCENNHYGMGTAEWRAAKSPAYYKRGDY- 252 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEI 301 +PG++VDGMD AVK A + GPII+EM TYRY GHSMSDP + YRTR+EI Sbjct: 253 -VPGLKVDGMDAFAVKQACKFAKEHALK-SGPIILEMDTYRYHGHSMSDPGSTYRTRDEI 310 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 + +R DPIE++RK ++ + A+E +LK+IE VRK ++ ++ A+ P+P+EL+++ Sbjct: 311 SGVRQERDPIERIRKLIVTHDLATEKELKDIEKEVRKQVDEAIAQAKESPMPEPSELFTN 370 Query: 362 IL 363 + Sbjct: 371 VY 372 >gi|195659213|gb|ACG49074.1| pyruvate dehydrogenase E1 component alpha subunit [Zea mays] Length = 392 Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats. Identities = 165/363 (45%), Positives = 227/363 (62%), Gaps = 14/363 (3%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLI 62 + + V+ + ++ SV K VD P E + + + LS +R M L+ Sbjct: 23 LLARGVSDSADAVTVDTSVPFKSH------IVDPPPRE----ATTSARELLSFFRDMSLM 72 Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RRFE A LY ++ GFCHL GQEAV VGM+ + T D +ITAYR+H LA G D Sbjct: 73 RRFEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAATRADAIITAYRDHCAYLARGGDP 132 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 AEL GR+ G S+GKGGSMH + F+GGHGIVGAQV LG GIAFA +YR+ + Sbjct: 133 VAAFAELMGRRDGCSRGKGGSMHFYKRDANFFGGHGIVGAQVPLGCGIAFAQRYRKEGTV 192 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 +GDGAANQGQ++E+ N+AALW L +I V ENN Y MGT+ RAS + KRG Sbjct: 193 TFDLYGDGAANQGQLFEALNMAALWKLPIILVCENNHYGMGTAEWRASKSPAYYKRGDY- 251 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEI 301 +PG++VDGMD+ AVK A + GPII+EM TYRY GHSMSDP + YRTR+EI Sbjct: 252 -VPGLKVDGMDVLAVKQACKFAKEHA-LENGPIILEMDTYRYHGHSMSDPGSTYRTRDEI 309 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 +R DPIE+VRK +L +++A+ +LK++E +RK ++ ++ A+ PDP+EL+++ Sbjct: 310 AGIRQERDPIERVRKLMLVHEFATAQELKDMEKEIRKQVDAAIAKAKECPLPDPSELFTN 369 Query: 362 ILI 364 + + Sbjct: 370 VYV 372 >gi|296810350|ref|XP_002845513.1| pyruvate dehydrogenase E1 component subunit alpha [Arthroderma otae CBS 113480] gi|238842901|gb|EEQ32563.1| pyruvate dehydrogenase E1 component subunit alpha [Arthroderma otae CBS 113480] Length = 405 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 157/371 (42%), Positives = 218/371 (58%), Gaps = 20/371 (5%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEF---------NKEQELSAY 56 + D A + A+ SV D E FE E K++ Y Sbjct: 24 RRSVTTDAASAHAEDIPAEDDKPFSVKLSD----ESFETYELDPPPYTLKTTKKELKQMY 79 Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 M+ IRR E A +LY + GFCHL GQEAV G++ ++T D++ITAYR HG + Sbjct: 80 YDMVSIRRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAITPDDKLITAYRCHGFAM 139 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G I+ EL GR+ GI+ GKGGSMHMF F+GG+GIVGAQV +G G+AFA +Y Sbjct: 140 MRGGTVRSIIGELLGRREGIAYGKGGSMHMF--AKNFFGGNGIVGAQVPVGAGLAFAQQY 197 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 + +GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGT+ +R+SA T++ Sbjct: 198 NGEANTTICLYGDGASNQGQVFEAFNMAKLWNLPVMFGCENNKYGMGTAANRSSALTDYY 257 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANY 295 KRG IPG++V+GMD+ A+KA + Y GP++ E +TYRY GHSMSDP Y Sbjct: 258 KRGQY--IPGIKVNGMDVLAIKAAVQYGREYTVGGHGPLVFEYVTYRYGGHSMSDPGTTY 315 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 RTREEI MRS +DPI ++++LL +E +LK I+ + R +++ V A+ PD Sbjct: 316 RTREEIQRMRSTNDPIAGLKQKLLDWNITTEEELKAIDKDARSMVDEEVAIAEKMAAPDA 375 Query: 356 AE--LYSDILI 364 L+ DI + Sbjct: 376 TSRILFEDIYV 386 >gi|254797140|ref|YP_003081978.1| pyruvate dehydrogenase E1 component, alpha subunit [Neorickettsia risticii str. Illinois] gi|254590365|gb|ACT69727.1| pyruvate dehydrogenase E1 component, alpha subunit [Neorickettsia risticii str. Illinois] Length = 322 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 165/320 (51%), Positives = 215/320 (67%), Gaps = 2/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + LS Y MLLIRRFEE+AGQLY MG + GFCHL IGQEA+ VG++ L + D Sbjct: 3 LEPLDSSVLLSLYGKMLLIRRFEERAGQLYSMGEICGFCHLYIGQEAIAVGLEYCLGKED 62 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +IT+YR+HG +LA G +MAEL GR G S GKGGSMHMF + F+GGHGIVG+Q Sbjct: 63 SIITSYRDHGMMLARGSSTDVMMAELLGRSSGCSAGKGGSMHMFDPERNFFGGHGIVGSQ 122 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 VSLGTGIAFA KYR S+ + CFGDGA NQGQVYESFN+AALW L V+YV+ENN YAMG Sbjct: 123 VSLGTGIAFAEKYRESNAVVASCFGDGAINQGQVYESFNMAALWKLPVLYVVENNMYAMG 182 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 +SV A ++ S RG SF IPG +GMD+ V AV R+ GP+++E TYR Sbjct: 183 SSVESVCANSSLSNRGESFGIPGYSANGMDLIDVIRVTMNAVERVRSGSGPVLVEYKTYR 242 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 ++GHSMSDPA+YR++EE++ DP++ V LL +L ++ V+ I++S Sbjct: 243 FKGHSMSDPASYRSKEEVSSF-KERDPLKSVETLLLQAGVL-PSELDRVQKVVKDRISSS 300 Query: 344 VEFAQSDKEPDPAELYSDIL 363 V +A++ PD A L ++I Sbjct: 301 VAYARASAFPDQANLMTNIY 320 >gi|158297889|ref|XP_001689086.1| AGAP004773-PA [Anopheles gambiae str. PEST] gi|157014544|gb|EDO63503.1| AGAP004773-PA [Anopheles gambiae str. PEST] Length = 377 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 158/340 (46%), Positives = 211/340 (62%), Gaps = 6/340 (1%) Query: 25 RAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 R + ++ +V+ KE L Y M IRR E AG LY ++ GFCHL Sbjct: 14 RKTNQAFKLHNLEEGPSTKVT-LTKEDALKYYGQMYTIRRMETAAGNLYKEKVIRGFCHL 72 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 GQEA VGM+ ++ D ITAYR HG GV ++AELTGR G ++GKGGSM Sbjct: 73 YSGQEACAVGMRAAMRPEDSCITAYRCHGWTYLMGVSPVGVLAELTGRSSGCARGKGGSM 132 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM+ FYGG+GIVGAQV LG GI FA KY + C+ +GDGAANQGQ++E +N+A Sbjct: 133 HMYGK--NFYGGNGIVGAQVPLGVGIGFAAKYNGTQGACIALYGDGAANQGQLFEVYNMA 190 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 LWN I+V ENN Y MGTS RASA TN+ RG +PG+ VDGMD+ AV+ A Sbjct: 191 KLWNAPCIFVCENNGYGMGTSAERASANTNYYTRGDF--VPGIWVDGMDVLAVREATRFA 248 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKW 323 + + + KGPI++E TYRY GHSMSDP YR+R+EI E+R DPI +R+++L + Sbjct: 249 LEHTSSGKGPILMETATYRYSGHSMSDPGTSYRSRDEIAEVRQTRDPITSLREKILTTEL 308 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 A+ +LKEIE +R ++++ + A++DKE EL +DI Sbjct: 309 ATVEELKEIEGKIRAEVDSATKVAKTDKEISVDELTADIY 348 >gi|224064370|ref|XP_002301442.1| predicted protein [Populus trichocarpa] gi|222843168|gb|EEE80715.1| predicted protein [Populus trichocarpa] Length = 355 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 126/324 (38%), Positives = 189/324 (58%), Gaps = 8/324 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 KE+ L Y M+L R FE+ Q+Y G + GF HL GQEAV G L D ++ Sbjct: 5 ITKEEGLEVYEDMILGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKREDSVV 64 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A +M+EL G+ G +G+GGSMHMFS ++ GG +G + + Sbjct: 65 STYRDHVHALSKGVPARAVMSELFGKTTGCCRGQGGSMHMFSKEHNLIGGFAFIGEGIPV 124 Query: 167 GTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 TG AF++KYRR D + + FGDG N GQ +E N+AALW L +++V+ENN Sbjct: 125 ATGAAFSSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL 184 Query: 220 YAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEM 279 +A+G S RA++ K+G +F +PG+ VDGMD+ V+ +A+ R +GP ++E Sbjct: 185 WAIGMSHVRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIGRARRGEGPTLVEC 244 Query: 280 LTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYR+RGHS++DP R E + DPI ++K ++ N ASE +LK IE + ++ Sbjct: 245 ETYRFRGHSLADPDELRDPAEKARY-AARDPIAALKKYMIENSLASEAELKAIEKKIDEV 303 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 + +VEFA P ++L ++ Sbjct: 304 VEEAVEFADESPHPSRSQLLENVF 327 >gi|225682979|gb|EEH21263.1| pyruvate dehydrogenase E1 component subunit alpha [Paracoccidioides brasiliensis Pb03] Length = 405 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 159/370 (42%), Positives = 221/370 (59%), Gaps = 14/370 (3%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAYR 57 A + D + +V A +V D F E +E+ E K++ Y Sbjct: 22 AVRRTVTTDAASSHAEAVPADENTPFTVKLSDESF-ETYELDPPPYTLETTKKELKQMYH 80 Query: 58 LMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 M+ IRR E A +LY + GFCHL GQEAV VG++ ++T+ D++ITAYR HG Sbjct: 81 DMVSIRRMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAITKEDKLITAYRCHGFAFM 140 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 G I+ EL GR+ GI+ GKGGSMHMF F+GG+GIVGAQV +G G+AFA +Y Sbjct: 141 RGGTIKSIIGELLGRREGIAYGKGGSMHMF--AKNFFGGNGIVGAQVPVGAGLAFAQQYN 198 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 V +GDGA+NQGQV+E+FN+A L NL I+ ENN+Y MGTS +R+SA T++ K Sbjct: 199 GEKTTTVTLYGDGASNQGQVFEAFNMAKLLNLPCIFGCENNKYGMGTSANRSSALTDYYK 258 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYR 296 RG IPG++++GMD+ A+KA + Y A +GP++ E +TYRY GHSMSDP YR Sbjct: 259 RGQY--IPGLKINGMDVLAIKAAVQYGREYTIAGRGPLVFEYVTYRYGGHSMSDPGTTYR 316 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPD-- 354 TREEI MRS +DPI ++++LL SE +LK I+ + R ++ V A+ P+ Sbjct: 317 TREEIQRMRSTNDPIAGLKQKLLDWGVTSEEELKGIDKDARNFVDGQVAEAEKMPFPEAT 376 Query: 355 PAELYSDILI 364 P L+ D + Sbjct: 377 PRILFEDTYV 386 >gi|325978046|ref|YP_004287762.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177974|emb|CBZ48018.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 335 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 125/328 (38%), Positives = 189/328 (57%), Gaps = 3/328 (0%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 +LEG + ++EQ + Y M IR F+ + +L G V G H +G+EA VG Sbjct: 9 YLEG-NMMNLSQEQYIDMYLKMQRIREFDMRINKLVRRGFVQGMTHFSVGEEAASVGAMA 67 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 LT D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG + Sbjct: 68 HLTYDDIIFSNHRGHGQCIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTN 127 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GIVG +L G A Y+++D I V GDGA N+G +ES N+AA W L VI+ I N Sbjct: 128 GIVGGGYALAVGAALTQHYQKTDNIVVAFSGDGATNEGSFHESVNLAATWGLPVIFFIIN 187 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPII 276 N+Y + ++RA+ + R ++ IPG DG D+ AV TM KAV + R+ GP I Sbjct: 188 NRYGISMDITRATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVDHVRSGNGPAI 247 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +E+ +YR+ GHS +D YR++ E+++ DP+ + R L N AS +L I+ V Sbjct: 248 VEVESYRWFGHSTADAGKYRSKGEVDDW-KKKDPLVKFRTYLTENHLASHDELDAIDAQV 306 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDILI 364 K I+++ FAQ+ EPD + + D+ + Sbjct: 307 VKEIDDAYAFAQNSPEPDLSVAFEDVWV 334 >gi|320546529|ref|ZP_08040844.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus equinus ATCC 9812] gi|320448914|gb|EFW89642.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus equinus ATCC 9812] Length = 334 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 128/328 (39%), Positives = 189/328 (57%), Gaps = 3/328 (0%) Query: 38 FLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM 97 +LEG V + EQ + Y M IR F+ + +L G V G H +G+EA VG Sbjct: 8 YLEG-NVMNLSLEQYIDMYLKMQRIREFDMRINKLVRRGFVQGMTHFSVGEEAASVGAMA 66 Query: 98 SLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGH 157 LT D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG + Sbjct: 67 HLTYDDIIFSNHRGHGQCIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTN 126 Query: 158 GIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIEN 217 GIVG +L G A +Y++++ I V GDGA N+G +ES N+AA W L VI+ I N Sbjct: 127 GIVGGGYALAVGAALTQQYKKTNNIVVAFSGDGATNEGSFHESVNLAATWRLPVIFFIIN 186 Query: 218 NQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPII 276 N+Y + + RA+ + R ++ IPG DG D+ AV TM KAV + R+ GP I Sbjct: 187 NRYGISMDIRRATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVEHVRSGNGPAI 246 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +E+ +YR+ GHS +D YR++EE+N+ DP+ + R L N AS +L I+ V Sbjct: 247 VEVESYRWFGHSTADAGKYRSKEEVNDW-KKKDPLVKFRTYLTENHLASHDELDAIDTQV 305 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDILI 364 K I+++ FAQ+ EPD + + DI + Sbjct: 306 VKEIDDAYAFAQNSPEPDLSVAFEDIWV 333 >gi|254430581|ref|ZP_05044284.1| pyruvate dehydrogenase E1 component, alpha subunit [Cyanobium sp. PCC 7001] gi|197625034|gb|EDY37593.1| pyruvate dehydrogenase E1 component, alpha subunit [Cyanobium sp. PCC 7001] Length = 376 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 130/327 (39%), Positives = 197/327 (60%), Gaps = 9/327 (2%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG-D 103 + N+++ L YR M+L RRFE+K ++Y G + GF HL GQEAV G+ ++ D Sbjct: 48 ATVNRDEGLMLYRDMVLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIKAMRAQHD 107 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YR+H H L+CGV A ++M+EL G++ G SKG+GGSMH+FS ++ GG+ +G Sbjct: 108 WFCSTYRDHVHALSCGVPARQVMSELFGKETGCSKGRGGSMHLFSREHHLLGGYAFIGEG 167 Query: 164 VSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + + G AF ++Y+R D + FGDG N GQ YE N+AALW L +++V+E Sbjct: 168 IPVALGAAFTSRYKRDALGDSGSDAVTAAFFGDGTCNIGQFYECLNMAALWKLPILFVVE 227 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN++A+G +RA++ ++ +F + G +VDGMD+ AV+A +A+ RA +GP + Sbjct: 228 NNKWAIGMDHNRATSDPEIWRKAAAFGMAGEEVDGMDVLAVRAAAQRAIERARAGEGPTL 287 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +E LTYRYRGHS++DP R E E + DPI+++ L+ A+ +LK I+ + Sbjct: 288 LECLTYRYRGHSLADPDELRAEAE-KEFWAKRDPIKRLAASLVEQGLATADELKAIDKEI 346 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 I + V FA EPDPAEL I Sbjct: 347 DAEIADCVSFALEAPEPDPAELTRYIW 373 >gi|302903157|ref|XP_003048797.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256729731|gb|EEU43084.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 409 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 166/372 (44%), Positives = 232/372 (62%), Gaps = 14/372 (3%) Query: 2 YVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSA 55 Y+A + VT +L+ SV V+ D F E +E+ E K++ Sbjct: 23 YIAARSVTTNAASASLSHSVPQSDDEPFVVNLSDESF-ETYELDPPPYSLEVTKKELKQM 81 Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M+ IR+ E A +LY + GFCHL GQEAV VG++ ++T+ D +ITAYR HG Sbjct: 82 YYDMVSIRQMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAITKADDIITAYRCHGFA 141 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G I+ EL GR+ GIS GKGGSMHMF GFYGG+GIVGAQV +G G+AFA+K Sbjct: 142 LMRGATVKSIIGELLGRREGISYGKGGSMHMFYK--GFYGGNGIVGAQVPVGAGLAFAHK 199 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y + ++ +GDGA+NQGQV+E+FN+A LWNL ++ ENN+Y MGTS +R+SA T++ Sbjct: 200 YNGNKNASIILYGDGASNQGQVFEAFNMAKLWNLPALFGCENNKYGMGTSAARSSALTDY 259 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-AN 294 KRG IPG++V+GMD+ AVKA + + A KGP+++E +TYRY GHSMSDP Sbjct: 260 YKRGQY--IPGLKVNGMDVLAVKAAVKYGKEWTAADKGPMVLEYVTYRYGGHSMSDPGTT 317 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ--SDKE 352 YRTREEI MRS +D I +++++L + +E +LK+I+ R +N V A+ + + Sbjct: 318 YRTREEIQRMRSTNDAIAGLKQKILDWEVTTEDELKKIDKEARAHVNEEVAIAEGMAVPD 377 Query: 353 PDPAELYSDILI 364 P P LY D + Sbjct: 378 PKPEILYEDTYV 389 >gi|229085564|ref|ZP_04217800.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-44] gi|228697785|gb|EEL50534.1| Pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit [Bacillus cereus Rock3-44] Length = 332 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 124/319 (38%), Positives = 181/319 (56%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E +EQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EMTQEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCELDGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI+V ENN Y T Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFVAENNGYGEATP 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG++VDG D+ AV +AV R +GP +IE +TYR Sbjct: 191 FEYASSCKSIADRAKAYNIPGVRVDGKDLLAVYKAAAEAVERARNGEGPTLIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L++ +E +L +E V + + ++E Sbjct: 251 GHFEGEAQTYKTAEEKEEHLNEKDAIVNFRKHLINKGLLTETELVNMERAVDEAVQKAIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F++ P EL +D+ + Sbjct: 311 FSEKSPYPADEELLTDVYV 329 >gi|322516770|ref|ZP_08069676.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus vestibularis ATCC 49124] gi|322124692|gb|EFX96144.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus vestibularis ATCC 49124] Length = 334 Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats. Identities = 122/327 (37%), Positives = 190/327 (58%), Gaps = 1/327 (0%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 +E ++ + +KE L + M IR F+ + +L G V G H +G+EA VG Sbjct: 7 IEEIDMVKLSKETHLEMFTKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVQH 66 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L+ D + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +G Sbjct: 67 LSYDDIFFSNHRGHGQSIAQDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNG 126 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG +L G A +Y+ + I V GDGA N+G +ES N+AA W L VI+ I NN Sbjct: 127 IVGGGYALAVGAALTQQYKETGNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINN 186 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIII 277 +Y + + RA+ + R ++ IPG DG D+ AV TM KAV + R GP I+ Sbjct: 187 RYGISMDIHRATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVEHVRGGNGPAIV 246 Query: 278 EMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVR 337 E+ +YR+ GHS +D YRT+EE++E ++N+DPI + R L+ AS +L I+ V+ Sbjct: 247 EVESYRWFGHSTADAGVYRTKEEVDEWKNNNDPIIKYRDYLVSENIASAEELDAIQSQVK 306 Query: 338 KIINNSVEFAQSDKEPDPAELYSDILI 364 ++++ EFAQ+ +P+ + + D+ + Sbjct: 307 AEVDSAYEFAQNSPDPELSVAFEDVWV 333 >gi|257867138|ref|ZP_05646791.1| acetoin dehydrogenase subunit alpha [Enterococcus casseliflavus EC30] gi|257873472|ref|ZP_05653125.1| acetoin dehydrogenase subunit alpha [Enterococcus casseliflavus EC10] gi|257801194|gb|EEV30124.1| acetoin dehydrogenase subunit alpha [Enterococcus casseliflavus EC30] gi|257807636|gb|EEV36458.1| acetoin dehydrogenase subunit alpha [Enterococcus casseliflavus EC10] Length = 333 Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats. Identities = 110/319 (34%), Positives = 182/319 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + + E + M IR F+EK +L+ G++ G HL +GQEA G L + D Sbjct: 13 ANLSNETFKEIFYKMWEIRFFDEKVDELFARGLIHGTTHLAVGQEATAAGSSAVLKKTDW 72 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH LA G + +++MAEL GR G +KGKGGSMH+ G G +GIVG Sbjct: 73 ITSTHRGHGHTLAKGTNVNEMMAELFGRTTGTNKGKGGSMHIADLDTGNLGANGIVGGGF 132 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + G A +K +++ ++ + GDG+ N+G +E+ N+A++W+L V++ IENN+Y M Sbjct: 133 PIAVGAALTSKMKKTKQVALSYGGDGSTNEGSFHEAVNLASIWDLPVVFFIENNKYGMSG 192 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV + + S+R ++ I G+ +DG ++ V T +AV R +GP +IE +TYR+ Sbjct: 193 SVEKMTNIPQLSERAKAYGIEGITIDGNNLIEVIETTYQAVEKARRGEGPTLIEAMTYRW 252 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +GHS SD YRT++E + R DPI+Q + L+ +E + +EI ++ IN++V Sbjct: 253 KGHSKSDAKKYRTKQEEEQWRKEKDPIQQAKTTLIAAGIFTEEEAEEIRKKAKQAINDAV 312 Query: 345 EFAQSDKEPDPAELYSDIL 363 F ++ ++ D+ Sbjct: 313 TFGENSPVVAVETMFEDVY 331 >gi|288905068|ref|YP_003430290.1| acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Streptococcus gallolyticus UCN34] gi|288731794|emb|CBI13359.1| putative acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) [Streptococcus gallolyticus UCN34] Length = 321 Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats. Identities = 123/320 (38%), Positives = 185/320 (57%), Gaps = 2/320 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 ++EQ + Y M IR F+ + +L G V G H +G+EA VG LT D + Sbjct: 2 NLSQEQYIDMYLKMQRIREFDMRINKLVRRGFVQGMTHFSVGEEAASVGAMAHLTYDDII 61 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG + Sbjct: 62 FSNHRGHGQCIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTNGIVGGGYA 121 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A Y+++D I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 122 LAVGAALTQHYQKTDNIVVAFSGDGATNEGSFHESVNLAATWGLPVIFFIINNRYGISMD 181 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 ++RA+ + R ++ IPG DG D+ AV TM KAV + R+ GP I+E+ +YR+ Sbjct: 182 ITRATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVDHVRSGNGPAIVEVESYRW 241 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS +D YR++EE+++ DP+ + R L N AS +L I+ V K I+++ Sbjct: 242 FGHSTADAGKYRSKEEVDDW-KKKDPLVKFRTYLTENHLASYDELDAIDAQVVKEIDDAY 300 Query: 345 EFAQSDKEPDPAELYSDILI 364 FAQ+ EPD + + D+ + Sbjct: 301 AFAQNSPEPDLSVAFEDVWV 320 >gi|302039226|ref|YP_003799548.1| dehydrogenase (E1) component of pyruvate dehydrogenase complex subunit alpha (acetyl-transferring) [Candidatus Nitrospira defluvii] gi|300607290|emb|CBK43623.1| Dehydrogenase (E1) component of pyruvate dehydrogenase complex, alpha subunit (acetyl-transferring) [Candidatus Nitrospira defluvii] Length = 325 Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats. Identities = 144/324 (44%), Positives = 212/324 (65%), Gaps = 4/324 (1%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +++ +K+ LS YR MLLIRRFEEK+ ++Y + + GF HL IG+EA+ VG +L D Sbjct: 1 MTDMDKDDLLSLYRQMLLIRRFEEKSAEMYALAKIAGFLHLYIGEEAIAVGAIAALRPDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 I+AYR+HGH LA G D ++MAEL G+ G+ +GKGGSMH+ + F GG+ IVG Sbjct: 61 YAISAYRDHGHCLARGSDPGQVMAELFGKATGLCQGKGGSMHLVDLAHRFMGGYAIVGGH 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + L TG+AFA KY++ D + V FG+GA GQ +E+FN+AALW L VI++ ENN+Y MG Sbjct: 121 IPLATGLAFATKYQKQDLVTVCFFGEGAVPSGQAHEAFNLAALWKLPVIFICENNRYGMG 180 Query: 224 TSVSRASA-QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T V RA A N ++ S+ I +VDGMD+ AV+A M V RA GP IE +TY Sbjct: 181 TPVHRAVALYENVAEAARSYGIMAERVDGMDVLAVRALMRTVVDQIRAGHGPFFIEAMTY 240 Query: 283 RYRGHSMSDPA--NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKII 340 R+ GHSM+DP+ +YR+++E+ E R DP+ +++++L E D K +E +V +I+ Sbjct: 241 RFMGHSMADPSHGHYRSKDEVEEHR-KRDPLVLLKQQILDQALCVEADFKPLEQDVGEIV 299 Query: 341 NNSVEFAQSDKEPDPAELYSDILI 364 +V+FA P+P+ L+ D+++ Sbjct: 300 AAAVKFADESPFPEPSALHRDVMV 323 >gi|225424805|ref|XP_002271234.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 398 Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats. Identities = 154/337 (45%), Positives = 216/337 (64%), Gaps = 4/337 (1%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 +SV V E ++ L + M L+RR E + LY ++ GFCHL GQ Sbjct: 45 TSVPFVGHKCEPPSRNVETTPKELLGFFHDMALMRRMEIASDSLYKSKLIRGFCHLYDGQ 104 Query: 89 EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 EAV VGM+ ++T+ D +ITAYR+H L G + +EL GRQ G SKGKGGSMH + Sbjct: 105 EAVAVGMEAAITKKDCIITAYRDHCIYLGRGGTLVECFSELMGRQAGSSKGKGGSMHFYK 164 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 +GFYGGHGIVGAQV LG G+AFA KY + + + +GDGAANQGQ++E+ NIAAL + Sbjct: 165 KDSGFYGGHGIVGAQVPLGCGLAFAQKYSKDETVTFAMYGDGAANQGQLFEALNIAALLD 224 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L I V ENN Y MGT+ RA+ + KRG +PG++VDGMD AVK A + Sbjct: 225 LPAILVCENNHYGMGTAEWRAAKSPAYYKRGDY--VPGLKVDGMDALAVKQACRFAKEHA 282 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 + GPII+EM TYRY GHSMSDP + YRTR+EI+ +R DPIE++RK +L ++ ++E Sbjct: 283 LKN-GPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILSHELSTEA 341 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 +LK IE +R +++++ A+ P+P+EL++++ + Sbjct: 342 ELKSIEKKIRSEVDDAIAQAKESSMPEPSELFTNVYV 378 >gi|313207225|ref|YP_004046402.1| pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit [Riemerella anatipestifer DSM 15868] gi|312446541|gb|ADQ82896.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Riemerella anatipestifer DSM 15868] gi|315022973|gb|EFT35994.1| Pyruvate dehydrogenase E1 component alpha subunit [Riemerella anatipestifer RA-YM] gi|325335328|gb|ADZ11602.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Riemerella anatipestifer RA-GD] Length = 333 Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats. Identities = 148/321 (46%), Positives = 199/321 (61%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EG 102 + EF+KE L Y M + RRFE+K LY + GF HL GQEA+ G ++ Sbjct: 1 MKEFSKEVYLKWYEDMTMWRRFEDKCRSLYLKQKIRGFLHLYNGQEAIPAGFTHAMDLTK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D MITAYR H H +A GVD +IMAEL G+ G S+G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 DSMITAYRCHIHPMAMGVDPKRIMAELCGKATGTSQGMGGSMHIFSKEHRFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG GIAFA+KY + + GDGA QG ++E+FN+A W L V++V ENNQYAM Sbjct: 121 QIPLGAGIAFADKYFDRKAVNICFMGDGAVRQGSLHETFNMAMNWKLPVVFVCENNQYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R + + K G+ + +P + VD MD V +A+ R GP IE TY Sbjct: 181 GTSVKRTANHEDIYKLGLGYEMPCLPVDAMDPEKVAEAAFEAIERARRGDGPTFIEARTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD YRT+EE+ + DPIE V++R+L NKWA+E +L++++ N R + Sbjct: 241 RYRGHSMSDAEPYRTKEEV-AIHKEQDPIELVKQRILDNKWATEAELEQLDENSRAFVEE 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 VEF ++ PD ++Y + Sbjct: 300 CVEFMENSPFPDAEKVYEYVY 320 >gi|257877224|ref|ZP_05656877.1| acetoin dehydrogenase subunit alpha [Enterococcus casseliflavus EC20] gi|257811390|gb|EEV40210.1| acetoin dehydrogenase subunit alpha [Enterococcus casseliflavus EC20] Length = 333 Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats. Identities = 111/319 (34%), Positives = 183/319 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + + E + M IR F+EK +L+ G++ G HL +GQEA G L + D Sbjct: 13 ANLSNETFKEIFYKMWEIRFFDEKVDELFARGLIHGTTHLAVGQEATAAGSSAVLKKTDW 72 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + +R HGH LA G + +++MAEL GR G +KGKGGSMH+ G G +GIVG Sbjct: 73 ITSTHRGHGHTLAKGTNVNEMMAELFGRTTGTNKGKGGSMHIADLDTGNLGANGIVGGGF 132 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + G A +K +++ ++ + GDG+ N+G +E+ N+A++W+L V++ IENN+Y M Sbjct: 133 PIAVGAALTSKMKKTKQVALSYGGDGSTNEGSFHEAVNLASIWDLPVVFFIENNKYGMSG 192 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 SV + + S+R ++ I G+ +DG ++ V T +AV R +GP +IE +TYR+ Sbjct: 193 SVEKMTNIPQLSERAKAYGIEGITIDGNNLIEVIETTYQAVEKARRGEGPTLIEAMTYRW 252 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 +GHS SD YRT++E + R DPI+Q + L+ +E + +EI N ++ IN++V Sbjct: 253 KGHSKSDAKKYRTKQEEEQWRKEKDPIQQAKTTLIAAGIFTEEEAEEIRKNAKQAINDAV 312 Query: 345 EFAQSDKEPDPAELYSDIL 363 F ++ ++ D+ Sbjct: 313 TFGENSPVVAVETMFEDVY 331 >gi|168047407|ref|XP_001776162.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672537|gb|EDQ59073.1| predicted protein [Physcomitrella patens subsp. patens] Length = 394 Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats. Identities = 160/363 (44%), Positives = 221/363 (60%), Gaps = 8/363 (2%) Query: 2 YVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLL 61 + T + ++ + VD P E + + + +R M + Sbjct: 18 ALVSPGSTFARALSTSSDPLTLEIPVPFKGHKVDPP----SSTVETSAAELVDFFRTMFV 73 Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 +RR E A LY + GFCHL GQEAV VGM+ +L + D +ITAYR+H L G Sbjct: 74 MRRMEIAADSLYKSKFIRGFCHLYDGQEAVCVGMEAALNDKDCIITAYRDHCTHLGRGGT 133 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 ++ AEL GR+ G S GKGGSMHM++ K GFYGG+GIVGAQ LG G+AFA KY + D Sbjct: 134 VLEVFAELMGRKDGCSLGKGGSMHMYNKKGGFYGGNGIVGAQTPLGAGLAFAQKYLKVDG 193 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 + + +GDGAANQGQ++E+ NI+ALW+L VIYV ENN Y MGT+ R++ + KRG Sbjct: 194 VTLAMYGDGAANQGQLFEAMNISALWDLPVIYVCENNHYGMGTAEWRSAKSPEYYKRGDY 253 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREE 300 +PG++VDGMD AVK + A Y + GP+++EM TYRY GHSMSDP + YRTR+E Sbjct: 254 --VPGLKVDGMDCLAVKQAVKFAKEYSLKN-GPMVLEMDTYRYHGHSMSDPGSTYRTRDE 310 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 I+ +R DPIE++RK LL +++AS DLK IE +K + +++ A+ PD EL+S Sbjct: 311 ISGVRQERDPIERIRKLLLSHEFASVADLKAIEKEAKKEVEDALAKAKESPSPDAPELFS 370 Query: 361 DIL 363 I Sbjct: 371 HIY 373 >gi|91078982|ref|XP_974523.1| PREDICTED: similar to pyruvate dehydrogenase [Tribolium castaneum] gi|270003684|gb|EFA00132.1| hypothetical protein TcasGA2_TC002948 [Tribolium castaneum] Length = 397 Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats. Identities = 157/320 (49%), Positives = 213/320 (66%), Gaps = 5/320 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + +++ L YR M +RR E AG LY ++ GFCHL GQEAV VG+K +L D Sbjct: 53 TTLSRDDALLYYRQMHTVRRMETSAGNLYKEKIIRGFCHLYSGQEAVAVGIKAALRPHDD 112 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR HG GV+ ++AELTGRQ G ++GKGGSMHM++ N FYGG+GIVGAQV Sbjct: 113 VITAYRAHGWSHLMGVNPLGVLAELTGRQSGCARGKGGSMHMYT--NHFYGGNGIVGAQV 170 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+A A KY+ +D +CV +GDGAANQGQV+E FN+A LW++ I+V ENN Y MGT Sbjct: 171 PLGVGLALAAKYKGTDGVCVALYGDGAANQGQVFEVFNMAKLWDIPCIFVCENNGYGMGT 230 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S +RA+A T + RG IPG+ +DGMD+ AV+ AV +C + KGPI++E TYRY Sbjct: 231 SAARAAANTAYYTRGDV--IPGIWIDGMDVLAVREAAKFAVDHCTSGKGPILLEAATYRY 288 Query: 285 RGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHSMSDP YRTREEI E+R DPI +++++ S +LK I+ +R ++ + Sbjct: 289 SGHSMSDPGTSYRTREEIQEVRQTRDPITSFKEKIITANLVSPEELKAIDTEIRSTVDEA 348 Query: 344 VEFAQSDKEPDPAELYSDIL 363 + A+++KE EL +DI Sbjct: 349 TKKAKAEKEIPLEELTADIY 368 >gi|30020900|ref|NP_832531.1| acetoin dehydrogenase E1 component alpha-subunit [Bacillus cereus ATCC 14579] gi|29896453|gb|AAP09732.1| Acetoin dehydrogenase E1 component alpha-subunit [Bacillus cereus ATCC 14579] Length = 332 Score = 338 bits (868), Expect = 7e-91, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 184/319 (57%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E KEQ Y ML IR+FE+K +L+ G++ GF HL G+EAV VG+ LT+ D + Sbjct: 11 EITKEQARWMYEKMLEIRKFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLTDSDSI 70 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A G D + +MAEL G+ G+ KGKGGSMH+ G G +GIVG Sbjct: 71 TSTHRGHGHCIAKGCDLNGMMAELFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFP 130 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A KY+ + + V FGDGA N+G +E N+AA+W L VI++ ENN Y T+ Sbjct: 131 LACGSALTAKYKGTKDVSVCFFGDGANNEGTFHEGVNLAAIWKLPVIFIAENNGYGEATT 190 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 AS+ + + R ++NIPG+QVDG D+ AV +AV R GP IIE +TYR Sbjct: 191 FEYASSCDSIADRAKAYNIPGVQVDGKDLLAVYKAAAEAVERARNGDGPTIIECMTYRNY 250 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH + Y+T EE E + D I RK L+H +E +L ++E V + + S+E Sbjct: 251 GHFEGEAQTYKTSEEKEEHLNEKDAIVNFRKHLIHEALLTESELVDMEKPVDEAVQRSIE 310 Query: 346 FAQSDKEPDPAELYSDILI 364 F+++ PD EL D+ + Sbjct: 311 FSENSPYPDDEELLKDVYV 329 >gi|125983744|ref|XP_001355637.1| GA20028 [Drosophila pseudoobscura pseudoobscura] gi|54643953|gb|EAL32696.1| GA20028 [Drosophila pseudoobscura pseudoobscura] Length = 399 Score = 338 bits (868), Expect = 7e-91, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 217/343 (63%), Gaps = 12/343 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF EG + K++ L Y M IRR E AG LY ++ G Sbjct: 34 ATEATVQVNRPFKLHRLDEGPATEVKLTKDEALKYYTQMQTIRRIETAAGNLYKEKIIRG 93 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV ++AELTG Q G ++GK Sbjct: 94 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPIGVLAELTGAQSGCARGK 153 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM++ F+GG+GIVGAQV LGTG+ A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 154 GGSMHMYAP--NFFGGNGIVGAQVPLGTGVGLACKYKGNGGMCLALYGDGAANQGQVFEA 211 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 212 YNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 269 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y GP+++E TYRY GHSMSDP YRTREEI E+R DPI ++ + Sbjct: 270 TEFAINYV-NTVGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 328 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + ++K I++ VRK I+ + FA+SD E + L++D+ Sbjct: 329 ELGLITTDEVKAIDLKVRKEIDEATAFAKSDAELAVSHLWTDV 371 >gi|195163423|ref|XP_002022549.1| GL13094 [Drosophila persimilis] gi|194104541|gb|EDW26584.1| GL13094 [Drosophila persimilis] Length = 399 Score = 338 bits (868), Expect = 7e-91, Method: Composition-based stats. Identities = 157/343 (45%), Positives = 217/343 (63%), Gaps = 12/343 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + V+ PF EG + K++ L Y M IRR E AG LY ++ G Sbjct: 34 ATEATVQVNRPFKLHRLDEGPATEVKLTKDEALKYYTQMQTIRRIETAAGNLYKEKIIRG 93 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++ + D +I+AYR HG GV ++AELTG Q G ++GK Sbjct: 94 FCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPIGVLAELTGAQSGCARGK 153 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM++ F+GG+GIVGAQV LGTG+ A KY+ + +C+ +GDGAANQGQV+E+ Sbjct: 154 GGSMHMYAP--NFFGGNGIVGAQVPLGTGVGLACKYKGNGGMCLALYGDGAANQGQVFEA 211 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS RAS T++ RG + +PG+ VDGMD+ AV++ Sbjct: 212 YNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDA--LPGIWVDGMDVLAVRSA 269 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 + A+ Y GP+++E TYRY GHSMSDP YRTREEI E+R DPI ++ + Sbjct: 270 TEFAINYV-NTVGPLVMETNTYRYSGHSMSDPGTSYRTREEIQEVRQKRDPITSFKELCI 328 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDI 362 + ++K I++ VRK I+ + FA+SD E + L++D+ Sbjct: 329 ELGLITTDEVKAIDLKVRKEIDEATAFAKSDAELAVSHLWTDV 371 >gi|251782656|ref|YP_002996959.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391286|dbj|BAH81745.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127471|gb|ADX24768.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 326 Score = 338 bits (867), Expect = 7e-91, Method: Composition-based stats. Identities = 121/323 (37%), Positives = 189/323 (58%), Gaps = 2/323 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 ++ +KEQ L + M IR F+ + +L G V G H +G+EA VG LT Sbjct: 4 KMVTVSKEQYLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLTYD 63 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 64 DIIFSNHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGG 123 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 +L G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 124 GYALAVGAALTQQYKGTNNIAVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGI 183 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 S++ A+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ + Sbjct: 184 SMSINNATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYETMGKAVEHVRGGNGPAIVEVES 243 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR+ GHS +D YRT+EE++E + DP+ + R L A++ +L I+ V+K ++ Sbjct: 244 YRWFGHSTADAGKYRTKEEVDEWKEK-DPMIKYRTYLTSEGIATDDELDAIQAQVKKEVD 302 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 ++ EFAQ+ +P+ + + D+ + Sbjct: 303 DAYEFAQNSPDPELSVAFEDVWV 325 >gi|148263337|ref|YP_001230043.1| pyruvate dehydrogenase (acetyl-transferring) [Geobacter uraniireducens Rf4] gi|146396837|gb|ABQ25470.1| Pyruvate dehydrogenase (acetyl-transferring) [Geobacter uraniireducens Rf4] Length = 325 Score = 338 bits (867), Expect = 8e-91, Method: Composition-based stats. Identities = 130/318 (40%), Positives = 182/318 (57%), Gaps = 1/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 L Y M+L R FEE + Y G + GF HL GQEAV VG +L + D ++ Sbjct: 9 LPDHDLLKMYEQMVLCREFEESCAEQYTKGHITGFLHLYSGQEAVAVGSTRALHKDDYIL 68 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 +AYREH + G + ++MAEL G+ G+ KGKGGSMH+F F GG+ IVG Q + Sbjct: 69 SAYREHAQAIVRGAEPKRVMAELFGKATGLCKGKGGSMHLFDPDLSFMGGYAIVGGQFPI 128 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+AFA K+R+ +I FGDGA NQG +E N A LW L V++V ENN Y +GT V Sbjct: 129 AVGLAFAAKFRQEGRIAACFFGDGAVNQGNFHEGLNWARLWELPVLFVCENNLYGIGTEV 188 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+SA + KR + +P QVDGMD+ AV + A + R H ++E +TYR+RG Sbjct: 189 HRSSALADIHKRTCGYEVPSTQVDGMDVMAVYQAIKYAAEWVREHNSAYLVEAMTYRFRG 248 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSM+DP YR+ E+ +S DP+ KRL+ + A + L I ++ +V F Sbjct: 249 HSMADPGKYRSAAELELWKS-RDPLPNFGKRLIEEEIAGQTQLDAIRKEAVAVVQEAVRF 307 Query: 347 AQSDKEPDPAELYSDILI 364 A+ P+ AE+Y+DI + Sbjct: 308 AEESPWPEDAEVYNDIYV 325 >gi|332706268|ref|ZP_08426336.1| pyruvate dehydrogenase E1 component, alpha subunit [Lyngbya majuscula 3L] gi|332354973|gb|EGJ34445.1| pyruvate dehydrogenase E1 component, alpha subunit [Lyngbya majuscula 3L] Length = 342 Score = 338 bits (867), Expect = 9e-91, Method: Composition-based stats. Identities = 146/336 (43%), Positives = 211/336 (62%), Gaps = 11/336 (3%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 +P +E + S + L Y M+L R FE+K ++Y G + GF HL GQEAV G+ Sbjct: 7 LPKVEDY--SPITSAEGLLLYEDMMLGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGV 64 Query: 96 KMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 +L G D + + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS ++ Sbjct: 65 IKALRIGEDFVSSTYRDHVHALSAGVPAREVMAELFGKATGCSKGRGGSMHMFSQEHNLL 124 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALW 207 GG+ V + + TG AF +KYRR D++ V FGDGA N GQ +E N+AALW Sbjct: 125 GGYAFVAEGIPVATGSAFQSKYRREALGDESSDQVTVCFFGDGACNNGQFFECLNMAALW 184 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 L VIYV+ENN++A+G + RA++Q K+ F + G++VDGMD+ AV+ +A+A Sbjct: 185 KLPVIYVVENNKWAIGMAHERATSQPEIYKKASVFGMAGVEVDGMDVMAVRTVAQEAIAR 244 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 RA +GP +IE LTYR+RGHS++DP R++EE E DPI+ + L N A+ Sbjct: 245 ARAGEGPTLIEALTYRFRGHSLADPDELRSKEE-KEFWLTRDPIKNMASYLTENHLATPE 303 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +LK IE ++++IN++VEFAQ+ EPDP+EL+ + Sbjct: 304 ELKAIESKIQEVINDAVEFAQASPEPDPSELHRYVF 339 >gi|76788339|ref|YP_329623.1| acetoin dehydrogenase, TPP-dependent, E1 component, alpha subunit [Streptococcus agalactiae A909] gi|76563396|gb|ABA45980.1| acetoin dehydrogenase, TPP-dependent, E1 component, alpha subunit, putative [Streptococcus agalactiae A909] Length = 322 Score = 338 bits (867), Expect = 9e-91, Method: Composition-based stats. Identities = 119/322 (36%), Positives = 185/322 (57%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +KEQ L + M IR + K +L G V G H +G+EA VG LT+ D Sbjct: 1 MVTLSKEQHLDMFLKMQRIRDVDMKFNKLVRRGFVQGMTHFSVGEEAASVGAIQDLTDSD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + AEL G+ G SKG+GGSMH+ + + G YG +GIVG Sbjct: 61 IIFSNHRGHGQTIAKGIDIGGMFAELAGKATGTSKGRGGSMHLANLEKGNYGTNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y +D I + GD A N+G +ES N+AA+WNL VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYEGTDNIVITFSGDSATNEGSFHESVNLAAVWNLPVIFFIINNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T ++ ++ + R ++ IPG V DG D+ AV M + + Y R+ GP I+E+ +Y Sbjct: 181 TDITYSTKIPHLYMRADAYGIPGHYVEDGNDLMAVYEKMHEVINYVRSGNGPAIVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE++ ++ DP+++ R L+ N+ A+E +L IE V K + Sbjct: 241 RWFGHSTADAGVYRTKEEVDSWKAK-DPVKRYRAYLIENEIATEEELAAIEAQVIKEVEE 299 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 V+FA+ PD + + D+ + Sbjct: 300 GVKFAEESPFPDMSVAFEDVFV 321 >gi|321271259|gb|ADW79432.1| pyruvate dehydrogenase e1 alpha subunit [Pichia ciferrii] Length = 338 Score = 338 bits (867), Expect = 9e-91, Method: Composition-based stats. Identities = 148/313 (47%), Positives = 204/313 (65%), Gaps = 7/313 (2%) Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y+ M++IRR E + LY + GFCHL +GQEA+ VG++ ++T+ D +IT+YR HG Sbjct: 1 MYKEMIIIRRMEMASDALYKAKKIRGFCHLSVGQEAIAVGIENAITKKDSVITSYRCHGF 60 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G ++ EL GR+ G+S GKGGSMHM++T GFYGG+GIVGAQV LG G+AFA+ Sbjct: 61 TYMRGSPVKDVLGELMGRRCGVSYGKGGSMHMYTT--GFYGGNGIVGAQVPLGAGLAFAH 118 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KYR D +GDGAANQGQV+ES+N+A LWNL I+ ENN+Y MGTS +R+SA T+ Sbjct: 119 KYRNEDNCSFTLYGDGAANQGQVFESYNMAKLWNLPCIFACENNKYGMGTSAARSSALTD 178 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++V+GMD+ A A + + GP+++E TYRY GHSMSDP Sbjct: 179 YYKRGQY--IPGLKVNGMDVLASYQASKFAKDWAISGNGPLVLEYETYRYGGHSMSDPGT 236 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTREEI MRS +DPI ++ LL A+E ++K + R ++ VE A + P Sbjct: 237 TYRTREEIQHMRSRNDPIAGLKATLLELGIATEEEIKSYDKAARSYVDEQVELADASPAP 296 Query: 354 DP--AELYSDILI 364 + + L+ DI + Sbjct: 297 EAKMSILFEDIYV 309 >gi|186472595|ref|YP_001859937.1| pyruvate dehydrogenase (acetyl-transferring) [Burkholderia phymatum STM815] gi|184194927|gb|ACC72891.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia phymatum STM815] Length = 327 Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 124/320 (38%), Positives = 191/320 (59%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S+ ++E+ L AYRLM IR FEE+ + G + GF HL G+EA VG + L + D Sbjct: 5 SQLSREKLLDAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLNDKDY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ GRQ G+ KGKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVHGMMAEIYGRQTGVCKGKGGSMHIADLSKGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K +++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKLKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + + + N + R F +PG+ VDG D AV + +A+ R GP ++E+ RY Sbjct: 185 SSTWSVSSDNIADRASGFGMPGVIVDGFDFFAVHEALGEAIERARGGGGPTLVEVKLSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D +++ ++R++ + + DL++I+ +V+ +I++SV Sbjct: 245 FGHFEGDAQTYRAPGEVQKLREEKDCLKRFQERVVRAEMLNTDDLRKIDSDVKALIDDSV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ P A+L +D+ + Sbjct: 305 LKAKAAPLPAEADLLTDVYV 324 >gi|91779775|ref|YP_554983.1| pyruvate dehydrogenase (lipoamide) [Burkholderia xenovorans LB400] gi|91692435|gb|ABE35633.1| Pyruvate dehydrogenase (lipoamide) [Burkholderia xenovorans LB400] Length = 327 Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 122/320 (38%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E +K++ L AYR+M IR FEE+ + G + GF HL G+EA VG + L + D Sbjct: 5 TELSKDELLKAYRMMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLNDADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ GR+ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGRKTGVCHGKGGSMHIADLSKGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A KY++S + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLICGAALAAKYKKSGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + + A N + R F +PG+ VDG D AV + +A+ R GP ++E+ RY Sbjct: 185 SSTWSVATDNIADRASGFGMPGVIVDGFDFFAVHEALGEAIERARHGGGPTLVEVKFSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D +++ +R++ S L+ ++ V+ +I+ +V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKRFEERVVRAGMLSADQLRGVDAEVKTLIDTAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ P +L SD+ + Sbjct: 305 TEAKAAPLPTAEDLLSDVYV 324 >gi|170058473|ref|XP_001864937.1| pyruvate dehydrogenase [Culex quinquefasciatus] gi|167877569|gb|EDS40952.1| pyruvate dehydrogenase [Culex quinquefasciatus] Length = 371 Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 142/319 (44%), Positives = 213/319 (66%), Gaps = 6/319 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +++Q + Y+ M +IRR E AG LY +V GFCHL GQEA GMK ++ D + Sbjct: 30 QVSRDQAIELYKQMQIIRRLETSAGNLYKEKIVRGFCHLYSGQEACACGMKSAMRPQDNI 89 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 I+AYR HG GV +++ELTG+QGG ++GKGGSMHM++ FYGG+GIVGAQV Sbjct: 90 ISAYRVHGWTYLMGVPPKGVLSELTGKQGGCARGKGGSMHMYAP--NFYGGNGIVGAQVP 147 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G+A A +Y+ + +C+ +GDGA+NQGQ++E++NIA LW L I+V ENN Y MGTS Sbjct: 148 LGAGVALACQYKGNKGVCLALYGDGASNQGQIFEAYNIAHLWKLPCIFVCENNGYGMGTS 207 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +R+S TN+ +RG +PG+ VDGMD+ AVK + A+ Y +KGP+++E+ TYRY Sbjct: 208 AARSSCNTNYFQRGDV--LPGIWVDGMDVIAVKLATEFAIDYV-LNKGPLVMEVCTYRYS 264 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YRTR+E+ E+R DPI + +++ + ++K+++ ++K ++ + Sbjct: 265 GHSMSDPGTSYRTRDEVQEVRQTRDPISSFKDKIIAAGLVTADEIKKMDGEIKKEVDEAT 324 Query: 345 EFAQSDKEPDPAELYSDIL 363 + A++D E EL +D+ Sbjct: 325 KSAKADTEIGLPELTTDVY 343 >gi|22537041|ref|NP_687892.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae 2603V/R] gi|25010949|ref|NP_735344.1| hypothetical protein gbs0895 [Streptococcus agalactiae NEM316] gi|76799368|ref|ZP_00781525.1| acetoin dehydrogenase [Streptococcus agalactiae 18RS21] gi|77407981|ref|ZP_00784731.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae COH1] gi|77410725|ref|ZP_00787084.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae CJB111] gi|77413176|ref|ZP_00789375.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae 515] gi|22533899|gb|AAM99764.1|AE014232_2 acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae 2603V/R] gi|23095328|emb|CAD46539.1| unknown [Streptococcus agalactiae NEM316] gi|76585275|gb|EAO61876.1| acetoin dehydrogenase [Streptococcus agalactiae 18RS21] gi|77160794|gb|EAO71906.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae 515] gi|77163261|gb|EAO74213.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae CJB111] gi|77173439|gb|EAO76558.1| acetoin dehydrogenase, thymine PPi dependent, E1 component, alpha subunit [Streptococcus agalactiae COH1] Length = 322 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 119/322 (36%), Positives = 185/322 (57%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +KEQ L + M IR + K +L G V G H +G+EA VG LT+ D Sbjct: 1 MVTLSKEQHLDMFLKMQRIRDVDMKFNKLVRRGFVQGMTHFSVGEEAASVGAIQDLTDSD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + AEL G+ G SKG+GGSMH+ + + G YG +GIVG Sbjct: 61 IIFSNHRGHGQTIAKGIDIGGMFAELAGKATGTSKGRGGSMHLANLEKGNYGTNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y +D I + GD A N+G +ES N+AA+WNL VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYEGTDNIVIAFSGDSATNEGSFHESVNLAAVWNLPVIFFIINNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T ++ ++ + R ++ IPG V DG D+ AV M + + Y R+ GP I+E+ +Y Sbjct: 181 TDITYSTKIPHLYMRADAYGIPGHYVEDGNDLMAVYEKMHEVINYVRSGNGPAIVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE++ ++ DP+++ R L+ N+ A+E +L IE V K + Sbjct: 241 RWFGHSTADAGVYRTKEEVDSWKAK-DPVKRYRAYLIENEIATEEELAAIEAQVIKEVEE 299 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 V+FA+ PD + + D+ + Sbjct: 300 GVKFAEESPFPDMSVAFEDVFV 321 >gi|330924866|ref|XP_003300813.1| hypothetical protein PTT_12165 [Pyrenophora teres f. teres 0-1] gi|311324874|gb|EFQ91099.1| hypothetical protein PTT_12165 [Pyrenophora teres f. teres 0-1] Length = 426 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 165/369 (44%), Positives = 226/369 (61%), Gaps = 15/369 (4%) Query: 6 QDVTVGDIKMALNPS-VSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAYRL 58 + VT +P+ V A+ + D F E +E+ + K++ Y Sbjct: 28 RSVTTDAASSHTDPANVPAEDDKPFEIRLSDESF-ETYELDPPPYTMQVTKKELKKMYYD 86 Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ +RR E A +LY + GFCHL GQEAV VG++ ++ D +ITAYR HG L Sbjct: 87 MVAVRRMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAIERADHLITAYRCHGFALMR 146 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G I+ EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV +G GIAFA +Y Sbjct: 147 GATVKSIIGELLGRREGIAYGKGGSMHMFAP--GFYGGNGIVGAQVPVGAGIAFACQYEN 204 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + + +GDGA+NQGQV+E+FN+A LWNL VI+ ENN+Y MGT+ +R+SA T++ KR Sbjct: 205 KKNVTLALYGDGASNQGQVFEAFNMAKLWNLPVIFGCENNKYGMGTAANRSSALTDYYKR 264 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRT 297 G IPG++++GMD+ AVKA + YC A KGP++ E +TYRY GHSMSDP YRT Sbjct: 265 GQY--IPGLKINGMDVLAVKAAVKYGKEYCAADKGPLVYEYVTYRYGGHSMSDPGTTYRT 322 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP-- 355 REEI MRS +DPI ++++LL SE +LK I+ R ++ V A+ P+P Sbjct: 323 REEIQRMRSTNDPIAGLKQKLLDWGVTSEEELKSIDKQARSEVDAEVAEAEKMAPPEPTG 382 Query: 356 AELYSDILI 364 LY DI + Sbjct: 383 KVLYEDIYV 391 >gi|163786274|ref|ZP_02180722.1| pyruvate dehydrogenase E1 component alpha subunit [Flavobacteriales bacterium ALC-1] gi|159878134|gb|EDP72190.1| pyruvate dehydrogenase E1 component alpha subunit [Flavobacteriales bacterium ALC-1] Length = 333 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 146/321 (45%), Positives = 200/321 (62%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EG 102 + + KE L Y ML R+FE+K +Y V GF HL GQEAV+ G ++ Sbjct: 1 MQKITKEVYLKWYEDMLFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVLAGALHAMDLTK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H + GVD ++MAEL G+ G S+G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 DKMITAYRNHVQPIGMGVDPKRVMAELYGKATGTSQGLGGSMHIFSKEHRFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG GIAF +KY D + + CFGDGAA QG ++E+FN+A LW L VI+V ENN YAM Sbjct: 121 QIPLGAGIAFGDKYHDKDAVTICCFGDGAARQGSLHETFNMAMLWKLPVIFVCENNGYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R + T+ K G+ + +P VDGM+ V D+A+ R GP +E+ TY Sbjct: 181 GTSVERTANHTDIWKLGLGYEMPSGPVDGMNPIKVAEAFDEAIQRARTGGGPSFLEVKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YRT++E+ E DPI QV+ +L K+A+E +LKEI+ V+ + Sbjct: 241 RYRGHSMSDAQHYRTKDEVEEY-KKIDPITQVKDIILEKKYATEAELKEIDKGVKTRVLE 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 +FA+ P+ + +Y + Sbjct: 300 CEKFAEESPYPEKSVMYDAVY 320 >gi|171779362|ref|ZP_02920326.1| hypothetical protein STRINF_01207 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281979|gb|EDT47410.1| hypothetical protein STRINF_01207 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 342 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 121/320 (37%), Positives = 182/320 (56%), Gaps = 2/320 (0%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + E + Y M IR F+ + +L G V G H IG+EA VG LT D + Sbjct: 23 TLSLELYMEMYLKMQRIREFDMRINKLVRRGFVQGMTHFSIGEEAASVGAMAHLTYDDII 82 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG + Sbjct: 83 FSNHRGHGQCIAKDMDLNKMMAELAGKSTGVSKGRGGSMHLADFEKGNYGTNGIVGGGYA 142 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A Y+++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + + Sbjct: 143 LAVGAAITQDYQKTGNIVVAFSGDGATNEGSFHESVNLAATWKLPVIFYIINNRYGISMN 202 Query: 226 VSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + RA+ + R ++ IPG DG D+ AV TM KAV + R+ GP I+E+ +YR+ Sbjct: 203 IKRATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVEHVRSGNGPAIVEVESYRW 262 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS +D YR++EE++E DP+ + R L ++ AS +L I+ V K I+ + Sbjct: 263 FGHSTADAGKYRSKEEVDEW-KKKDPLVKFRTYLTEHELASIAELDAIDAQVVKEIDEAY 321 Query: 345 EFAQSDKEPDPAELYSDILI 364 EFA++ PD + + D+ + Sbjct: 322 EFAKNSPAPDLSVAFEDVWV 341 >gi|296161095|ref|ZP_06843905.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. Ch1-1] gi|295888618|gb|EFG68426.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. Ch1-1] Length = 327 Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 123/320 (38%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E +K++ L AYR+M IR FEE+ + G + GF HL G+EA VG + L + D Sbjct: 5 TELSKDELLKAYRMMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLNDADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ GR+ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGRKTGVCHGKGGSMHIADLSKGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A KYR+S + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLICGAALAAKYRKSGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + + A N + R F +PG+ VDG D AV + +A+ R GP ++E+ RY Sbjct: 185 SSTWSVATDNIADRASGFGMPGVIVDGFDFFAVHEALGEAIERARHGGGPTLVEVKFSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D +++ +R++ S L+ ++ V+ +I+ +V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKRFEERVVRAGMLSADQLRGVDAEVKTLIDTAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ P +L SD+ + Sbjct: 305 TEAKAAPLPTAEDLLSDVYV 324 >gi|238487602|ref|XP_002375039.1| pyruvate dehydrogenase, putative [Aspergillus flavus NRRL3357] gi|317143464|ref|XP_001819495.2| pyruvate dehydrogenase E1 component subunit alpha [Aspergillus oryzae RIB40] gi|220699918|gb|EED56257.1| pyruvate dehydrogenase, putative [Aspergillus flavus NRRL3357] Length = 402 Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 161/337 (47%), Positives = 213/337 (63%), Gaps = 9/337 (2%) Query: 32 DCVDIPFLEGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEA 90 D D L+ S E K + Y M +IRR E A LY + GFCHL GQEA Sbjct: 51 DSFDTYHLDPPPYSVETTKRELKQLYHDMTMIRRMELAADGLYKDRKIRGFCHLSTGQEA 110 Query: 91 VIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK 150 V VG++ +LT+ D++ITAYR HG L G I+ EL GR+ GIS GKGGSMHMF Sbjct: 111 VAVGIEHALTKQDKLITAYRSHGFTLMRGGTVKSIIGELLGRRDGISYGKGGSMHMFCES 170 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 F+GG+GIVGA V +G GIAFA +Y ++ + + +GDGAANQGQV+E+FN+A LWNL Sbjct: 171 --FFGGNGIVGASVPVGAGIAFAQQYNDANNVTIDLYGDGAANQGQVHEAFNMAKLWNLP 228 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 VI+ ENN+Y MGTSV RASA T + KRG IPG++++GMD+ AV + + + +A Sbjct: 229 VIFGCENNKYGMGTSVERASAMTEYYKRGQY--IPGLRINGMDVLAVLSAVRYGKNFIQA 286 Query: 271 HKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 GP++ E +TYRY GHSMSDP YR+REE+ + R+N DPI ++RL+ SE D Sbjct: 287 GNGPLVYEYMTYRYAGHSMSDPGIAYRSREELKDQRAN-DPISNFKERLIEWGVFSEEDA 345 Query: 330 KEIEMNVRKIINNSVEFAQSDKEPD--PAELYSDILI 364 K I+ NVR +N+ V A+ EPD L+ DI + Sbjct: 346 KAIDKNVRSKVNDEVAEAEKMPEPDTKLDILFEDIYV 382 >gi|222055048|ref|YP_002537410.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacter sp. FRC-32] gi|221564337|gb|ACM20309.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Geobacter sp. FRC-32] Length = 325 Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 125/326 (38%), Positives = 188/326 (57%), Gaps = 1/326 (0%) Query: 39 LEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMS 98 +E F E L Y L R FEE + Y G + GF HL GQEAV VG + Sbjct: 1 METHLRDVFPDEDLLHMYGQTALCREFEESCAEQYTKGHITGFLHLYSGQEAVAVGSTKA 60 Query: 99 LTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHG 158 L + D +++AYREH + G + ++MAEL G+ G+ KGKGGSMH+FS + F GG+ Sbjct: 61 LQQNDYILSAYREHAQAIVRGAEPKRVMAELFGKATGLCKGKGGSMHLFSPELNFMGGYA 120 Query: 159 IVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 IVG Q + G+AFA+K++ +I FGD A NQG +E+ N A +W L V+++ ENN Sbjct: 121 IVGGQFPIAVGLAFASKFKNEGRIAACFFGDAAVNQGNFHEALNWARVWELPVLFICENN 180 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 Y +GT V R+SA + +R +++P +VDGMD+ AV + A + R P ++E Sbjct: 181 FYGIGTEVHRSSALPDIHRRTCGYDMPSERVDGMDVIAVYQAVSHAAEWVREQSRPYLLE 240 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 +TYR+RGHSM+DP YR+ E+ +S DP+ ++ +RL+ A + L I + Sbjct: 241 AMTYRFRGHSMADPGKYRSTAELELWKS-RDPLLKLGRRLVQEGIAEQERLDAIRAQAVE 299 Query: 339 IINNSVEFAQSDKEPDPAELYSDILI 364 + +V+FA+ P+ E+Y+D+ I Sbjct: 300 TVQEAVKFAEESPWPEDGEVYTDVYI 325 >gi|222153241|ref|YP_002562418.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus uberis 0140J] gi|222114054|emb|CAR42432.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus uberis 0140J] Length = 322 Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 121/322 (37%), Positives = 189/322 (58%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +KEQ L + M IR F+ + +L G V G H +G+EA VG LT D Sbjct: 1 MVTVSKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLTYDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 61 IIFSNHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYKETNNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 +++ A+ + R ++ IPG DG D+ AV TMD+AV + R GP I+E+ +Y Sbjct: 181 MNINNATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMDQAVKHVRGGNGPAIVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE++ ++ DPI + R+ L A+E +L I+ V K I++ Sbjct: 241 RWFGHSTADAGKYRTKEEVDSWKAK-DPIVKYRQYLTKEGIATEEELDAIQAQVVKEIDD 299 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 + E+AQ+ +P+ + + D+ + Sbjct: 300 AYEYAQNSPDPELSVAFEDVWV 321 >gi|168020304|ref|XP_001762683.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686091|gb|EDQ72482.1| predicted protein [Physcomitrella patens subsp. patens] Length = 394 Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 164/359 (45%), Positives = 231/359 (64%), Gaps = 14/359 (3%) Query: 16 ALNPS-VSAKRAATSSVDCV--DIPF-LEGFEVS------EFNKEQELSAYRLMLLIRRF 65 A+ P+ ++ R ++S D + DIP +G V E + ++ + ++ M ++RR Sbjct: 18 AIAPAVIAFARPLSTSADPIVLDIPVPFKGHNVEAPSQSVETSAQELVGFFKTMFVMRRM 77 Query: 66 EEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKI 125 E A LY + GFCHL GQEAV VGM+ +L E D +ITAYR+H L G ++ Sbjct: 78 EIAADSLYKSKFIRGFCHLYDGQEAVCVGMEAALNERDCIITAYRDHCTHLGRGGSVLEV 137 Query: 126 MAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVV 185 AEL GR+ G S GKGGSMHM++ K GFYGG+GIVGAQ LG G+AFA KY ++D + + Sbjct: 138 FAELMGRKDGCSLGKGGSMHMYNKKGGFYGGNGIVGAQTPLGAGLAFAQKYLKADGVTLA 197 Query: 186 CFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIP 245 +GDGAANQGQ++E+ NI+ALW+L VIYV ENN Y MGT+ R++ + KRG +P Sbjct: 198 MYGDGAANQGQLFEAMNISALWDLPVIYVCENNHYGMGTAEWRSAKSPEYYKRGDY--VP 255 Query: 246 GMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEM 304 G++VDGMD AVK + A + + GP+++EM TYRY GHSMSDP + YRTR+EI+ + Sbjct: 256 GLKVDGMDCLAVKQAVKFAKEHALKN-GPMVLEMDTYRYHGHSMSDPGSTYRTRDEISGV 314 Query: 305 RSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 R DPIE++RK L+ ++ AS DLK IE +K + +++ A+ PD EL+S I Sbjct: 315 RQERDPIERIRKLLVTHELASVADLKAIEKEAKKEVEDALAKAKESPAPDSEELFSHIY 373 >gi|225868335|ref|YP_002744283.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus equi subsp. zooepidemicus] gi|225701611|emb|CAW98870.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus equi subsp. zooepidemicus] Length = 322 Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 121/322 (37%), Positives = 186/322 (57%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +KEQ L + M IR F+ + +L G V G H +G+EA VG LT D Sbjct: 1 MVTVSKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLTYDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 61 IIFSNHRGHGQSIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYKGTNNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 S+S A+ + R ++ IPG DG D+ AV TM KAV + R GP ++E+ +Y Sbjct: 181 MSISNATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYETMGKAVEHVRGGNGPAVVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE++E + DP+ + R L ++ +L I+ V++ I+ Sbjct: 241 RWFGHSTADAGKYRTKEEVDEWKEK-DPMLKYRAYLTGEGIVTDEELDAIQAQVKQEIDA 299 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 + EFAQ+ +PD + + D+ + Sbjct: 300 AYEFAQNSPDPDISVAFEDVWV 321 >gi|212538103|ref|XP_002149207.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Penicillium marneffei ATCC 18224] gi|210068949|gb|EEA23040.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Penicillium marneffei ATCC 18224] Length = 407 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 161/370 (43%), Positives = 224/370 (60%), Gaps = 14/370 (3%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAYR 57 A + D A ++ + +V D F E +E+ E K++ Y Sbjct: 24 AARRSVTTDAASAHAENIPQEDDKPFTVRLSDESF-ETYELDPPPYTLETTKKELKQMYY 82 Query: 58 LMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILA 117 M+ IRR E A +LY + GFCHL +GQEAV VG++ ++T D++ITAYR HG L Sbjct: 83 DMVAIRRMEMAADRLYKEKKIRGFCHLSVGQEAVAVGIEHAITPQDKLITAYRCHGFALM 142 Query: 118 CGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYR 177 G I+ EL GR+ GI+ GKGGSMHMF+ FYGG+GIVGAQV +G G+AFA +Y Sbjct: 143 RGGTVKSIIGELLGRREGIAYGKGGSMHMFAP--NFYGGNGIVGAQVPVGAGLAFAQQYN 200 Query: 178 RSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSK 237 + +GDGA+NQGQV+E++N+A LWNL V++ ENN+Y MGTS +R+SA T++ K Sbjct: 201 GEKTCSIALYGDGASNQGQVFEAYNMAKLWNLPVLFGCENNKYGMGTSAARSSALTDYYK 260 Query: 238 RGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYR 296 RG IPG++V+GMD+ A+KA + Y + KGP++ E +TYRY GHSMSDP YR Sbjct: 261 RGQY--IPGIKVNGMDVLAIKAAVQYGREYATSGKGPLVYEYVTYRYGGHSMSDPGTTYR 318 Query: 297 TREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA 356 +REEI MRS HD I ++++LL +E +LK I+ R I+ V A+ P+P Sbjct: 319 SREEIQRMRSTHDAIAGLKQKLLDWSVVTEEELKAIDKEARAFIDEEVAVAEQMAPPEPT 378 Query: 357 E--LYSDILI 364 LY DI + Sbjct: 379 TRNLYEDIFV 388 >gi|86605236|ref|YP_473999.1| dehydrogenase E1 component, alpha subunit [Synechococcus sp. JA-3-3Ab] gi|86553778|gb|ABC98736.1| dehydrogenase E1 component, alpha subunit [Synechococcus sp. JA-3-3Ab] Length = 333 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 131/319 (41%), Positives = 197/319 (61%), Gaps = 1/319 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 + + E+ Y M+L R FE+K ++Y G + GF HL GQEAV G+ +L D Sbjct: 12 ARISAEEARMLYEDMVLGRLFEDKCAEMYYKGKMFGFVHLYNGQEAVSTGVIKALKPTDY 71 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + + YR+H H L+ G+ +MAEL G+ G SKG+GGSMH+FS ++ F GG+ V + Sbjct: 72 VCSTYRDHVHALSTGIPPRAVMAELFGKATGCSKGRGGSMHLFSAEHNFLGGYAFVAEGI 131 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + TG AF+ KYR +D++ V FGDGA N GQ YE N+AALW L ++YV+ENN +A+G Sbjct: 132 PVATGAAFSAKYRGTDQVTVCFFGDGACNNGQFYECLNMAALWKLPIVYVVENNFWAIGM 191 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + RA++ T+ +G +F +PG QVDGMD+ AV+ +A+A RA +GP ++E +TYR+ Sbjct: 192 AHKRATSVTDIYLKGPAFGMPGYQVDGMDVLAVREAAQQAIARARAGEGPTLLECITYRF 251 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHS++DP R+ EE R DPI+++ + L + +E D + I+ V +I ++V Sbjct: 252 RGHSLADPDELRSPEEKEFWR-QRDPIKRLERYALEHNLMTEADFQAIQEKVSAVIEDAV 310 Query: 345 EFAQSDKEPDPAELYSDIL 363 FA EP EL+ + Sbjct: 311 LFALESPEPTLDELHRFVF 329 >gi|170101050|ref|XP_001881742.1| mitochondrial pyruvate dehydrogenase E1 component beta subunit [Laccaria bicolor S238N-H82] gi|164643097|gb|EDR07350.1| mitochondrial pyruvate dehydrogenase E1 component beta subunit [Laccaria bicolor S238N-H82] Length = 401 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 153/333 (45%), Positives = 210/333 (63%), Gaps = 10/333 (3%) Query: 33 CVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVI 92 D P LE + K++ L YR M +RR E A LY ++ GFCHL IGQEAV Sbjct: 57 QCDKPDLE----VQLTKDELLLMYRQMQTMRRMEMAADALYKAKLIRGFCHLAIGQEAVS 112 Query: 93 VGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNG 152 VG++ + D++ITAYR H + G ++ EL GRQ G+S GKGGSMH+F+ Sbjct: 113 VGLEHGILPNDRVITAYRCHPFAVMRGGTIKGVIGELLGRQDGMSHGKGGSMHIFTP--T 170 Query: 153 FYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVI 212 F+GG+GIVGAQV +G G+AFA KYR +GDGA+NQGQV+E+FN+A LWNL I Sbjct: 171 FFGGNGIVGAQVPIGAGVAFAQKYRGEKNCTFALYGDGASNQGQVFEAFNMAKLWNLPTI 230 Query: 213 YVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC-RAH 271 +V ENN+Y MGTS +R+S+ T + RG IPG+QV+GMDI A K + A + Sbjct: 231 FVCENNRYGMGTSAARSSSNTEYYTRGD--KIPGLQVNGMDIIATKQAVAYARKWAVEDD 288 Query: 272 KGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLK 330 KGP+++E +TYRY GHSMSDP YRTREE+ MRS DPI ++K + A+E +LK Sbjct: 289 KGPLLLEFVTYRYGGHSMSDPGTTYRTREEVQRMRSTQDPIRGLQKYIEEWGMATEQELK 348 Query: 331 EIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 ++ + ++ +VE A++ EP +L++DI Sbjct: 349 ALDKAAKAEVDAAVEEAKASPEPLIKDLWTDIY 381 >gi|329117246|ref|ZP_08245963.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus parauberis NCFD 2020] gi|326907651|gb|EGE54565.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus parauberis NCFD 2020] Length = 322 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 118/322 (36%), Positives = 186/322 (57%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +KE+ L + M IR F+ + +L G V G H +G+EA VG LT D Sbjct: 1 MVTVSKEKHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLTYDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 61 IIFSNHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADIEKGNYGTNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYKGTNNIAVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 +++ A+ + R ++ IPG DG D+ AV TM+KAV + R GP I+E+ +Y Sbjct: 181 MNINNATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMEKAVEHVRGGNGPAIVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE+ + DP+ + R L ++ +L I+ V+K I++ Sbjct: 241 RWFGHSTADAGKYRTKEEVASWKEK-DPMIKYRTYLTKEGIVTDEELDAIQEQVKKEIDD 299 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 + EFAQ+ +P+ + + D+ + Sbjct: 300 AYEFAQNSPDPELSVAFEDVWV 321 >gi|45201199|ref|NP_986769.1| AGR103Wp [Ashbya gossypii ATCC 10895] gi|44986053|gb|AAS54593.1| AGR103Wp [Ashbya gossypii ATCC 10895] Length = 408 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 152/343 (44%), Positives = 217/343 (63%), Gaps = 11/343 (3%) Query: 25 RAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHL 84 + +D+P L + K L Y+ M+++RR E LY + GFCHL Sbjct: 46 PETSFEGYMLDVPEL----TYKVTKGNLLQMYKDMIVVRRMEMACDALYKAKKIRGFCHL 101 Query: 85 CIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSM 144 +GQEA+ VG++ ++T+ D +IT+YR HG G ++AEL GR+ G+S GKGGSM Sbjct: 102 SVGQEAIAVGIENAITKRDTVITSYRCHGFTYMRGASVRAVLAELMGRRTGVSYGKGGSM 161 Query: 145 HMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIA 204 HM++ +GF+GG+GIVGAQV LG G+AFA++Y+ D +GDGA+NQGQV+E+FN+A Sbjct: 162 HMYT--DGFFGGNGIVGAQVPLGAGLAFAHQYKNEDVCAFALYGDGASNQGQVFEAFNMA 219 Query: 205 ALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKA 264 LWNL ++ ENN+Y MGT+ SR+SA T + KRG IPG++V+GMDI AV A Sbjct: 220 KLWNLPAVFACENNKYGMGTAASRSSAMTEYFKRGQY--IPGLKVNGMDILAVYQASKFA 277 Query: 265 VAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 +C + KGPI++E TYRY GHSMSDP YRTR+EI MRS +DPI ++ +LL Sbjct: 278 KHWCVSGKGPIVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMQLLDLGI 337 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AELYSDILI 364 ASE ++K + RK ++ VE A + P+ + L+ D+ + Sbjct: 338 ASEEEIKAYDKAARKYVDEQVELADAAPAPEAKMSILFEDVYV 380 >gi|313676600|ref|YP_004054596.1| pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit [Marivirga tractuosa DSM 4126] gi|312943298|gb|ADR22488.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Marivirga tractuosa DSM 4126] Length = 339 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 152/317 (47%), Positives = 208/317 (65%), Gaps = 1/317 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 F+KE + ++ M L+RRFEEK+GQLYG + GFCHL IGQEA + G +L +GD+ I Sbjct: 14 FDKETYMEWFKSMTLMRRFEEKSGQLYGQQKISGFCHLYIGQEACVAGAVSALKKGDKYI 73 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR+H H + G D +MAEL G++ G+SKGKGGSMHMF +N F+GGHGIVG Q+ L Sbjct: 74 TAYRDHAHPIGLGTDPKYVMAELFGKETGVSKGKGGSMHMFDKENHFFGGHGIVGGQIPL 133 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIAF+ +Y+ +D +C+ GDGA QG +E+ N+A L VI+ IENN YAMGTSV Sbjct: 134 GAGIAFSEQYKGTDNVCITYMGDGAVRQGAFHEALNMAMSMKLPVIFAIENNGYAMGTSV 193 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R S T G ++++P VD M++ V + +A R GP ++E TYRY+G Sbjct: 194 KRTSNVTELHTLGEAYDMPSKGVDAMNVENVHNAVAEAAERARKGDGPTLLEFRTYRYKG 253 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRT+EE+ E DPIEQ R+ +L NK+A+E +LKEI+ ++ + V+F Sbjct: 254 HSMSDPAKYRTKEELEEY-KGKDPIEQAREVILKNKYATEDELKEIDNAAKEQVKECVKF 312 Query: 347 AQSDKEPDPAELYSDIL 363 A+ P E+Y D+ Sbjct: 313 AEESDFPHVDEVYRDVY 329 >gi|148655863|ref|YP_001276068.1| pyruvate dehydrogenase [Roseiflexus sp. RS-1] gi|148567973|gb|ABQ90118.1| Pyruvate dehydrogenase (acetyl-transferring) [Roseiflexus sp. RS-1] Length = 350 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 130/307 (42%), Positives = 187/307 (60%), Gaps = 1/307 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + + YR M+LIRRFEEK ++Y +GGF HL IG+EA VG +L D + Sbjct: 21 LDAATLIDYYRQMVLIRRFEEKCQEMYTRAKIGGFLHLYIGEEATAVGAIAALRPDDHIF 80 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HGH +A G+D + +MAEL G+ G SKG GGSMH F+GG+ IVG+ + L Sbjct: 81 THYRDHGHAIARGLDINALMAELFGKVTGCSKGLGGSMHFADASKNFWGGYAIVGSHLPL 140 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 TG+A K +R D + +V FGDGA N G+ YES N A LW L V++V ENN YAMGT + Sbjct: 141 ATGVALGMKMQRKDSVVMVFFGDGATNGGEFYESLNFAQLWKLPVVFVCENNLYAMGTPL 200 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S+ T ++ +F++ +VDG D+ ++ +AV + R+ KGP+++E +TYR+RG Sbjct: 201 EVHSSVTEIYRKACAFDMKAERVDGNDVLVMREASLRAVEHARSGKGPVLLEAMTYRFRG 260 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS D YRT+E+I R N DPI + R LL+ A+E +++I+ + + +V F Sbjct: 261 HSAQDTQKYRTKEDIERHRRN-DPIVRYRTLLLNEGIATEQQIRDIDRMIDDQVEAAVRF 319 Query: 347 AQSDKEP 353 A EP Sbjct: 320 ADESPEP 326 >gi|319744917|gb|EFV97249.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus agalactiae ATCC 13813] Length = 322 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 119/322 (36%), Positives = 185/322 (57%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +KEQ L + M IR + K +L G V G H +G+EA VG LT+ D Sbjct: 1 MVTLSKEQHLDMFLKMQRIRDVDMKFNKLVRRGFVQGMTHFSVGEEAASVGAIQDLTDSD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + AEL G+ G SKG+GGSMH+ + + G YG +GIVG Sbjct: 61 IIFSNHRGHGQTIAKGIDIGGMFAELAGKATGTSKGRGGSMHLANLEKGNYGTNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y +D I + GD A N+G +ES N+AA+WNL VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYEGTDNIVIAFSGDSATNEGSFHESVNLAAVWNLPVIFFIINNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T ++ ++ + R ++ IPG V DG D+ AV M + + Y R+ GP I+E+ +Y Sbjct: 181 TDITYSTKIPHLYMRADAYGIPGHYVEDGNDLMAVYEKMHEVINYVRSGNGPAIVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE++ ++ DP+++ R L+ N+ A+E +L IE V K + Sbjct: 241 RWFGHSTADAGVYRTKEEVDSWKAK-DPVKRYRAYLIENEIATEEELAAIESQVIKEVEE 299 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 V+FA+ PD + + D+ + Sbjct: 300 GVKFAEESPFPDMSVAFEDVFV 321 >gi|28896104|ref|NP_802454.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Streptococcus pyogenes SSI-1] gi|50914122|ref|YP_060094.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS10394] gi|71903395|ref|YP_280198.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS6180] gi|94988496|ref|YP_596597.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS9429] gi|94990378|ref|YP_598478.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS10270] gi|94992321|ref|YP_600420.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS2096] gi|94994299|ref|YP_602397.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS10750] gi|306827458|ref|ZP_07460742.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus pyogenes ATCC 10782] gi|28811354|dbj|BAC64287.1| putative acetoin dehydrogenase (TPP-dependent) alpha chain [Streptococcus pyogenes SSI-1] gi|50903196|gb|AAT86911.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS10394] gi|71802490|gb|AAX71843.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS6180] gi|94542004|gb|ABF32053.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS9429] gi|94543886|gb|ABF33934.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS10270] gi|94545829|gb|ABF35876.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS2096] gi|94547807|gb|ABF37853.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS10750] gi|304430338|gb|EFM33363.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Streptococcus pyogenes ATCC 10782] Length = 326 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 121/323 (37%), Positives = 189/323 (58%), Gaps = 2/323 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E+ +KEQ L + M IR F+ + +L G V G H +G+EA VG L+ Sbjct: 4 EMVTVSKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLSYD 63 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 64 DIIFSNHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGG 123 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 +L G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 124 GYALAVGAALTQQYKGTNNIAVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGI 183 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 S++ A+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ + Sbjct: 184 SMSINNATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYETMGKAVEHVRGGNGPAIVEVES 243 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR+ GHS +D YRT+EE++E + DP+ + R L A++ +L I+ V+K ++ Sbjct: 244 YRWFGHSTADAGKYRTKEEVDEWKEK-DPMIKYRTYLTSEGIATDDELDAIQAQVKKEVD 302 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 ++ EFAQ+ +P+ + + D+ + Sbjct: 303 DAYEFAQNSPDPELSVAFEDVWV 325 >gi|19746010|ref|NP_607146.1| acetoin dehydrogenase (TPP-dependent) alpha chain [Streptococcus pyogenes MGAS8232] gi|21910197|ref|NP_664465.1| putative acetoin dehydrogenase (TPP-dependent) alpha chain [Streptococcus pyogenes MGAS315] gi|139473844|ref|YP_001128560.1| pyruvate dehydrogenase E1 component,alpha subunit [Streptococcus pyogenes str. Manfredo] gi|19748174|gb|AAL97645.1| putative acetoin dehydrogenase (TPP-dependent) alpha chain [Streptococcus pyogenes MGAS8232] gi|21904391|gb|AAM79268.1| putative acetoin dehydrogenase (TPP-dependent) alpha chain [Streptococcus pyogenes MGAS315] gi|134272091|emb|CAM30335.1| putative pyruvate dehydrogenase E1 component,alpha subunit [Streptococcus pyogenes str. Manfredo] Length = 322 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 120/322 (37%), Positives = 188/322 (58%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +KEQ L + M IR F+ + +L G V G H +G+EA VG L+ D Sbjct: 1 MVTVSKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLSYDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 61 IIFSNHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYKGTNNIAVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 S++ A+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ +Y Sbjct: 181 MSINNATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYETMGKAVEHVRGGNGPAIVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE++E + DP+ + R L A++ +L I+ V+K +++ Sbjct: 241 RWFGHSTADAGKYRTKEEVDEWKEK-DPMIKYRTYLTSEGIATDDELDAIQAQVKKEVDD 299 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 + EFAQ+ +P+ + + D+ + Sbjct: 300 AYEFAQNSPDPELSVAFEDVWV 321 >gi|332521383|ref|ZP_08397839.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Lacinutrix algicola 5H-3-7-4] gi|332043111|gb|EGI79309.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Lacinutrix algicola 5H-3-7-4] Length = 333 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 147/321 (45%), Positives = 205/321 (63%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EG 102 + + KE L Y M R+FE+K +Y V GF HL GQEAV+ G ++ Sbjct: 1 MQKVTKEVYLKWYEDMYFWRKFEDKLAAVYIQQKVRGFLHLYNGQEAVLAGALHAMDLTK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H + GVD ++MAEL G+ G SKG GGSMH+FS ++ FYGGHGIVG Sbjct: 61 DKMITAYRNHVQPIGMGVDPKRVMAELYGKATGTSKGLGGSMHIFSKEHRFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG GIAF +KY D + + CFGDGAA QG ++E+FN+A LWNL V++V ENN YAM Sbjct: 121 QIPLGAGIAFGDKYHDKDAVTICCFGDGAARQGSLHETFNLAMLWNLPVVFVCENNGYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R + T+ K G+ + +P VDGM+ V D+A++ R+ GP +E+ TY Sbjct: 181 GTSVERTANHTDIWKLGLGYEMPCGPVDGMNPVKVAEAFDEAISRARSGGGPTFLELKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YRT++E+NE DPI QV++ +L K+A+E +LKEI+ V+ +++ Sbjct: 241 RYRGHSMSDAQHYRTKDEVNEY-KKIDPITQVKEVILDKKYATEDELKEIDKRVKNLVSE 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 +FA+ P+ +Y + Sbjct: 300 CEKFAEESPYPEKNVMYDAVY 320 >gi|322411983|gb|EFY02891.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 326 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 121/323 (37%), Positives = 189/323 (58%), Gaps = 2/323 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 ++ +KEQ L + M IR F+ + +L G V G H +G+EA VG LT Sbjct: 4 KMVTVSKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLTYD 63 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 64 DIIFSNHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGG 123 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 +L G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 124 GYALAVGAALTQQYKGTNNIAVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGI 183 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 S++ A+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ + Sbjct: 184 SMSINNATNTPHLYTRAEAYGIPGFYCEDGNDLMAVYETMGKAVEHVRGGNGPAIVEVES 243 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR+ GHS +D YRT+EE++E + DP+ + R L A++ +L I+ V+K ++ Sbjct: 244 YRWFGHSTADAGKYRTKEEVDEWKEK-DPMIKYRTYLTSEGIATDDELDAIQAQVKKEVD 302 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 ++ EFAQ+ +P+ + + D+ + Sbjct: 303 DAYEFAQNSPDPELSVAFEDVWV 325 >gi|209559340|ref|YP_002285812.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes NZ131] gi|209540541|gb|ACI61117.1| Pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes NZ131] Length = 326 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 122/323 (37%), Positives = 189/323 (58%), Gaps = 2/323 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E+ +KEQ L + M IR F+ + +L G V G H +G+EA VG L+ Sbjct: 4 EMVTVSKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLSYD 63 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 64 DIIFSNHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGG 123 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 +L G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 124 GYALAVGAALTQQYKGTNNIAVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGI 183 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 S++ A+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ + Sbjct: 184 SMSINNATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYETMGKAVEHVRGGNGPAIVEVES 243 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR+ GHS +D YRT+EE++E + DP+ + R L A++ +L I+ V+K I+ Sbjct: 244 YRWFGHSTADAGKYRTKEEVDEWKEK-DPMIKYRTYLTSEGIATDDELDAIQAQVKKEID 302 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 ++ EFAQ+ +P+ + + D+ + Sbjct: 303 DAYEFAQNSPDPELSVAFEDVWV 325 >gi|221215152|ref|ZP_03588119.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Burkholderia multivorans CGD1] gi|221165088|gb|EED97567.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Burkholderia multivorans CGD1] Length = 327 Score = 336 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 120/320 (37%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L D Sbjct: 5 TQLSRDTLLEAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLGVADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGKKTGVCHGKGGSMHIADLSMGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K +++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKQKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPTIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 185 SSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVKFSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + +L+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFEARVVRAEVLTTDELRAVDAQVKALIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AEAKAAPLPDAADLLTDVYV 324 >gi|317969126|ref|ZP_07970516.1| pyruvate dehydrogenase E1 alpha subunit [Synechococcus sp. CB0205] Length = 369 Score = 336 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 127/327 (38%), Positives = 196/327 (59%), Gaps = 9/327 (2%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGD 103 + +++ L YR M L RRFE+K ++Y G + GF HL GQEAV G+ ++ + D Sbjct: 41 ATVTRDEGLMLYRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIKAMKMQHD 100 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + YR+H H L+CGV A ++M+EL G++ G SKG+GGSMH+FS ++ GG+ +G Sbjct: 101 WFCSTYRDHVHALSCGVPAREVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGYAFIGEG 160 Query: 164 VSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + + G AF ++Y+R D + FGDG N GQ YE N+AALW L +++V+E Sbjct: 161 IPVALGAAFTSRYKRDALGDSSSDAVTAAFFGDGTCNIGQFYECLNMAALWKLPILFVVE 220 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN++A+G +RA++ ++ +F + G +VDGMD+ AV+ +A+ RA +GP + Sbjct: 221 NNKWAIGMDHNRATSDPEIWRKAAAFGMAGEEVDGMDVLAVRGAAQRAIERARAGEGPTL 280 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 +E LTYR+RGHS++DP R E E + DPI+++ L+ + A+ +LK IE + Sbjct: 281 LECLTYRFRGHSLADPDELRAEAE-KEFWAQRDPIKRLAAHLIEHNLATTEELKGIEKEI 339 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 + + VEFA S EP P EL I Sbjct: 340 DAEVADCVEFALSAPEPKPEELTRYIW 366 >gi|91215150|ref|ZP_01252122.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Psychroflexus torquis ATCC 700755] gi|91186755|gb|EAS73126.1| pyruvate dehydrogenase complex, E1 component, alpha subunit [Psychroflexus torquis ATCC 700755] Length = 332 Score = 336 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 145/321 (45%), Positives = 201/321 (62%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EG 102 + + K+ L Y ML R+FE+K Q+Y V GF HL GQEA++ G + E Sbjct: 1 MKKITKKTYLKWYEDMLFWRKFEDKLAQVYIQQKVRGFLHLYNGQEAILAGALHVMDLEK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H + GVD ++MAEL G+ G S+G GGSMH+FS ++ FYGGHGIVG Sbjct: 61 DKMITAYRNHVQPIGMGVDPKRVMAELFGKATGTSQGLGGSMHIFSKEHRFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG G+AFA+KY ++ + + GDGAA QG ++E+ N+AA WNL V++ +ENN YAM Sbjct: 121 QIPLGAGLAFADKYFNTNAVTLCFLGDGAARQGSLHETLNMAANWNLPVVFCVENNGYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R S+ + K G+++ IP VDGMD V +D+A+ R KGP +++ TY Sbjct: 181 GTSVKRTSSSEDIWKLGLAYEIPSGPVDGMDPTKVAEALDEAITRARDGKGPTFLDLKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD YRT++E+ E DPI +V+K LL K+A+E DLK I+ V+ + Sbjct: 241 RYRGHSMSDAQKYRTKDEVEEY-QKIDPISKVKKTLLDKKYATEDDLKTIDKRVKDKVKE 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 +FA PD +Y + Sbjct: 300 CEKFADESDYPDKNVMYDVVY 320 >gi|189209542|ref|XP_001941103.1| pyruvate dehydrogenase E1 component subunit alpha [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977196|gb|EDU43822.1| pyruvate dehydrogenase E1 component subunit alpha [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 426 Score = 336 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 165/369 (44%), Positives = 226/369 (61%), Gaps = 15/369 (4%) Query: 6 QDVTVGDIKMALNPS-VSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAYRL 58 + VT +P+ V A+ + D F E +E+ + K++ Y Sbjct: 28 RSVTTDAASSHTDPANVPAEDDKPFEIRLSDESF-ETYELDPPPYTMQVTKKELKKMYYD 86 Query: 59 MLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILAC 118 M+ +RR E A +LY + GFCHL GQEAV VG++ ++ D +ITAYR HG L Sbjct: 87 MVAVRRMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAIERADHLITAYRCHGFALMR 146 Query: 119 GVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRR 178 G I+ EL GR+ GI+ GKGGSMHMF+ GFYGG+GIVGAQV +G GIAFA +Y Sbjct: 147 GATVKSIIGELLGRREGIAYGKGGSMHMFAP--GFYGGNGIVGAQVPVGAGIAFACQYEN 204 Query: 179 SDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKR 238 + + +GDGA+NQGQV+E+FN+A LWNL VI+ ENN+Y MGT+ +R+SA T++ KR Sbjct: 205 KKNVTLALYGDGASNQGQVFEAFNMAKLWNLPVIFGCENNKYGMGTAANRSSALTDYYKR 264 Query: 239 GVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRT 297 G IPG++++GMD+ AVKA + YC A KGP++ E +TYRY GHSMSDP YRT Sbjct: 265 GQY--IPGLKINGMDVLAVKAAVKYGKEYCAADKGPLVYEYVTYRYGGHSMSDPGTTYRT 322 Query: 298 REEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP-- 355 REEI MRS +DPI ++++LL SE +LK I+ R ++ V A+ P+P Sbjct: 323 REEIQRMRSTNDPIAGLKQKLLDWGVTSEEELKSIDKQARSEVDAEVAEAEKMAAPEPTG 382 Query: 356 AELYSDILI 364 LY DI + Sbjct: 383 KVLYEDIYV 391 >gi|225718060|gb|ACO14876.1| Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor [Caligus clemensi] Length = 390 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 162/324 (50%), Positives = 205/324 (63%), Gaps = 5/324 (1%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 E +E+ LS Y M +RR E A LY V GFCHL GQEA+ VGMK +L Sbjct: 43 PPEQGVLTREEGLSYYESMFTVRRLENAASNLYKEKSVRGFCHLSSGQEAICVGMKAALR 102 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 D +IT+YR HG GV ++AELTG++ G+ +GKGGSMHM+ FYGG+GIV Sbjct: 103 PQDAIITSYRAHGFAYMMGVSLLGVLAELTGKKSGVVRGKGGSMHMY--AKNFYGGNGIV 160 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQV LG GIAFA KY + +GDGAA QGQVYE++N+A LW+L VI+V ENN Y Sbjct: 161 GAQVPLGAGIAFAQKYNGDGGVTYSLYGDGAAQQGQVYEAYNMAKLWDLPVIFVCENNHY 220 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 MGT+ RA+A T F RG IPG VDGMD+ AV+ AV YC + KGP++ E+ Sbjct: 221 GMGTAQDRAAASTEFYTRGDY--IPGTLVDGMDVLAVREACKFAVDYCGSGKGPLVFEIA 278 Query: 281 TYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRY GHSMSDP YRTREE+ E+R DPI +R +++ + +LK IE VRK Sbjct: 279 TYRYHGHSMSDPGTSYRTREEVQEIRQTMDPITGLRDKIIDCGLIAPEELKAIEQKVRKE 338 Query: 340 INNSVEFAQSDKEPDPAELYSDIL 363 I+ V+ A++D E DP ELY D+ Sbjct: 339 IDAVVKRAKTDTEIDPVELYYDVY 362 >gi|225870730|ref|YP_002746677.1| pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus equi subsp. equi 4047] gi|225700134|emb|CAW94258.1| putative pyruvate dehydrogenase E1 component, alpha subunit [Streptococcus equi subsp. equi 4047] Length = 322 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 120/322 (37%), Positives = 188/322 (58%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +KEQ L + M IR F+ + +L G V G H +G+EA VG LT D Sbjct: 1 MVTVSKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLTYDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 61 IIFSNHRGHGQSIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYKGTNNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 S++ A+ + R ++ IPG DG D+ AV TM KAV + R GP ++E+ +Y Sbjct: 181 MSINNATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYETMSKAVEHVRGGNGPAVVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE++E + DP+ + R L A++ +L ++ V++ I++ Sbjct: 241 RWFGHSTADAGKYRTKEEVDEWKEK-DPMLKYRAYLTGEGIATDEELDALQAQVKQEIDD 299 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 + EFAQ+ +PD + + D+ + Sbjct: 300 AYEFAQNSPDPDISVAFEDVWV 321 >gi|71019541|ref|XP_760001.1| hypothetical protein UM03854.1 [Ustilago maydis 521] gi|46099527|gb|EAK84760.1| hypothetical protein UM03854.1 [Ustilago maydis 521] Length = 411 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 155/356 (43%), Positives = 219/356 (61%), Gaps = 6/356 (1%) Query: 10 VGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS-EFNKEQELSAYRLMLLIRRFEEK 68 + L S + K + D LE ++ E +K++ + Y M+ +RR E Sbjct: 39 ASRPQQELPESKTEKFTVDLNADSFKGYKLEVPKLEWETSKDELVHLYSEMVKMRRMEMA 98 Query: 69 AGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAE 128 A QLY ++ GFCHL IGQEAV VGM+ + D++ITAYR H + G ++AE Sbjct: 99 ADQLYKQKLIRGFCHLAIGQEAVAVGMEAGMKPSDKLITAYRCHPFTVQKGGSIKSVIAE 158 Query: 129 LTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFG 188 L GRQ GISKGKGGSMHMF+ F+GG+GIVGAQV +G GIAFA +Y ++ +G Sbjct: 159 LFGRQDGISKGKGGSMHMFTP--TFFGGNGIVGAQVPVGAGIAFAQQYMNTNDATFAMYG 216 Query: 189 DGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQ 248 DGA+NQGQV+E++N+A LWNL ++V ENN+Y MGTS R+S T + RG IPG+Q Sbjct: 217 DGASNQGQVFEAYNMAKLWNLPCVFVCENNKYGMGTSAERSSMNTQYYTRGDV--IPGIQ 274 Query: 249 VDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSN 307 V+ MD+ AV A A Y GP+++E++TYRY GHS+SDP YRTR+EI MRS+ Sbjct: 275 VNAMDVLAVAAATKHASGYTLGGNGPLLMELVTYRYGGHSLSDPGTTYRTRDEIQTMRSS 334 Query: 308 HDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 DPI+ ++ R+L E +LK I+ ++ ++ +VE A+ +P L++DI Sbjct: 335 SDPIQGLKARMLDWGVVEEAELKRIDKAAKEEVDQAVEEAKQSPQPSEHSLWTDIY 390 >gi|255729020|ref|XP_002549435.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240132504|gb|EER32061.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 401 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 161/376 (42%), Positives = 222/376 (59%), Gaps = 17/376 (4%) Query: 2 YVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEG------FEVSEFN----KEQ 51 + T + N V+ + A ++ D V I E EV + KE Sbjct: 1 MLRTSTTTRQLVGATANMLVARRSMAKAASDLVSIELPESSFEGYNLEVPSLSFETEKEN 60 Query: 52 ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 L Y+ M++IRR E A LY + GFCHL +GQEA+ VG++ ++T D +IT+YR Sbjct: 61 LLKMYKDMIVIRRMEMAADALYKAKKIRGFCHLSVGQEAIAVGIENAITPTDTVITSYRC 120 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 HG G I+AEL GR+ GI+ GKGGSMHMF+ NGFYGG+GIVGAQV LG G+A Sbjct: 121 HGFAHMRGASVKSILAELMGRRSGIAHGKGGSMHMFT--NGFYGGNGIVGAQVPLGAGLA 178 Query: 172 FANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASA 231 F++KYR +C +GDGA+NQGQV+ESFN+A LWNL VI+ ENN+Y MGT+ +R+SA Sbjct: 179 FSHKYRGDKDVCFDLYGDGASNQGQVFESFNMAKLWNLPVIFCCENNKYGMGTAAARSSA 238 Query: 232 QTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSD 291 T + KRG IPG++++GMD+ A A + GP+++E TYRY GHSMSD Sbjct: 239 MTEYYKRGQY--IPGLKINGMDVLACYQASKFAKDWASQGNGPLVLEYETYRYGGHSMSD 296 Query: 292 P-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV--EFAQ 348 P YRTREE+ MRS +DPI ++ LL A+E ++K + RK ++ V A Sbjct: 297 PGTTYRTREEVQHMRSRNDPIAGLKAVLLEKDIATEDEIKSYDKAARKYVDEQVAAAEAD 356 Query: 349 SDKEPDPAELYSDILI 364 + E L+ D+ + Sbjct: 357 APPEAKMDILFEDVYV 372 >gi|115399206|ref|XP_001215192.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114192075|gb|EAU33775.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 399 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 162/348 (46%), Positives = 213/348 (61%), Gaps = 13/348 (3%) Query: 20 SVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 SV + + P+ E K Q Y M +IRR E A LY + Sbjct: 42 SVPVAEDSFETYQFDPPPY-----TVETTKSQLKQLYYDMSMIRRMELAADNLYKQRKIR 96 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHL GQEAV VG++ +T+ D++ITAYR HG L G I+ EL GR+ GIS G Sbjct: 97 GFCHLSTGQEAVAVGIEHGITKHDKLITAYRSHGFTLMRGGTIKSIIGELLGRRDGISYG 156 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGSMHMF F+GG+GIVGA V LGTGIAFA +Y + + + +GDGAANQGQV+E Sbjct: 157 KGGSMHMFCKS--FFGGNGIVGANVPLGTGIAFAQQYNDAGNVTINLYGDGAANQGQVFE 214 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 SFN+A LWNL VI+ ENN+Y MGTSV RASA T + KRG IPG++V+GMD+ AV A Sbjct: 215 SFNMAKLWNLPVIFGCENNKYGMGTSVERASAMTEYYKRGQY--IPGLRVNGMDVLAVLA 272 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRL 318 + + +A GP++ E TYRY GHSMSDP YR+REE+ RSN DPI +++RL Sbjct: 273 AIRHGKRFVQAGNGPLLYEYQTYRYAGHSMSDPGIAYRSREEVQSERSN-DPISNLKERL 331 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AELYSDILI 364 + +E + K I+ +VR+ +N V A+ +P+P L+ DI + Sbjct: 332 VDWGVMTEDEAKAIDKDVREKVNEEVSEAEKMPDPEPRLDVLFEDIYV 379 >gi|254242834|ref|ZP_04936156.1| hypothetical protein PA2G_03601 [Pseudomonas aeruginosa 2192] gi|126196212|gb|EAZ60275.1| hypothetical protein PA2G_03601 [Pseudomonas aeruginosa 2192] Length = 324 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 124/321 (38%), Positives = 184/321 (57%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 +S + +Q L AYR+M IR FEE+ + G + GF HL G+EA G+ L + D Sbjct: 1 MSTLSTDQLLHAYRVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLRDDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HGH +A GVD +MAE+ G++ G+ +GKGGSMH+ + G G +GIVGA Sbjct: 61 CIASTHRGHGHCIAKGVDVHGMMAEIYGKKTGVCQGKGGSMHIADLEKGMLGANGIVGAG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 L G A A K + SD + V FGDG +N+G V+E+ N+AA+WNL ++V ENN YA Sbjct: 121 APLAAGSALAAKLKGSDAVAVAFFGDGGSNEGAVFEAMNLAAVWNLPCLFVAENNGYAEA 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T+ + + A + + R F +PG+ VDG D AV A+ RA +GP +IE+ R Sbjct: 181 TAANWSVACDHIADRAAGFGMPGVTVDGFDFFAVHEAAGAAIERARAGEGPSLIEVKLTR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 Y GH D YR +E+ R D ++Q R+R H S DL I+ V I ++ Sbjct: 241 YYGHFEGDAQTYRDPDEVKHYRETRDCLKQFRERTCHAGLLSASDLDAIDAEVEARIEDA 300 Query: 344 VEFAQSDKEPDPAELYSDILI 364 V+ A++D +P+P +L D+ + Sbjct: 301 VQRAKNDPKPEPDDLLRDVYV 321 >gi|187920594|ref|YP_001889626.1| pyruvate dehydrogenase [Burkholderia phytofirmans PsJN] gi|187719032|gb|ACD20255.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia phytofirmans PsJN] Length = 327 Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats. Identities = 123/320 (38%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +E +KE L AYR+M IR FEE+ + G + GF HL G+EA VG + L + D Sbjct: 5 TELSKEDLLKAYRMMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLNDADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ GR+ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGRKTGVCHGKGGSMHIADLSKGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A KY++S + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLICGAALAAKYKKSGGVGVCFFGDGASNQGVIFESLNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + + A N + R F +PG+ VDG D AV + +A+ R GP ++E+ RY Sbjct: 185 SSTWSVATDNIADRASGFGMPGVIVDGFDFFAVHEALGEAIERARQGGGPTLVEVKFSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D +++ +R++ + S L+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKRFEERVVRAEMLSVDQLRGVDAEVKSLIDSAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ P +L SD+ + Sbjct: 305 TEAKAAPLPTAEDLLSDVYV 324 >gi|209515192|ref|ZP_03264060.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. H160] gi|209504446|gb|EEA04434.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. H160] Length = 327 Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 123/320 (38%), Positives = 185/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +KE+ L AYR+M IR FEE+ + G + GF HL G+EA VG M L + D Sbjct: 5 TQLSKEKLLEAYRMMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMMHLNDADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ GR G+ +GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGRSTGVCRGKGGSMHIADLSKGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K R + + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKLRNTGGVGVCFFGDGASNQGVIFESMNLASVWRLPTIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + + A N + R F +PG+ VDG D AV + A+ R GP ++E+ RY Sbjct: 185 SSTWSVAADNIADRASGFGMPGVIVDGFDFFAVHEALGAAIERARDGGGPTLVEVKLSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D +++ +R++ + S +L+ I+ V+++I+ +V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKRFEERVMRAEMLSADELRGIDAKVKQLIDGAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ P A+L +D+ + Sbjct: 305 TEAKAAPLPSAADLLTDVYV 324 >gi|83767354|dbj|BAE57493.1| unnamed protein product [Aspergillus oryzae] Length = 371 Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 161/337 (47%), Positives = 213/337 (63%), Gaps = 9/337 (2%) Query: 32 DCVDIPFLEGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEA 90 D D L+ S E K + Y M +IRR E A LY + GFCHL GQEA Sbjct: 20 DSFDTYHLDPPPYSVETTKRELKQLYHDMTMIRRMELAADGLYKDRKIRGFCHLSTGQEA 79 Query: 91 VIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK 150 V VG++ +LT+ D++ITAYR HG L G I+ EL GR+ GIS GKGGSMHMF Sbjct: 80 VAVGIEHALTKQDKLITAYRSHGFTLMRGGTVKSIIGELLGRRDGISYGKGGSMHMFCES 139 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLN 210 F+GG+GIVGA V +G GIAFA +Y ++ + + +GDGAANQGQV+E+FN+A LWNL Sbjct: 140 --FFGGNGIVGASVPVGAGIAFAQQYNDANNVTIDLYGDGAANQGQVHEAFNMAKLWNLP 197 Query: 211 VIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRA 270 VI+ ENN+Y MGTSV RASA T + KRG IPG++++GMD+ AV + + + +A Sbjct: 198 VIFGCENNKYGMGTSVERASAMTEYYKRGQY--IPGLRINGMDVLAVLSAVRYGKNFIQA 255 Query: 271 HKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDL 329 GP++ E +TYRY GHSMSDP YR+REE+ + R+N DPI ++RL+ SE D Sbjct: 256 GNGPLVYEYMTYRYAGHSMSDPGIAYRSREELKDQRAN-DPISNFKERLIEWGVFSEEDA 314 Query: 330 KEIEMNVRKIINNSVEFAQSDKEPD--PAELYSDILI 364 K I+ NVR +N+ V A+ EPD L+ DI + Sbjct: 315 KAIDKNVRSKVNDEVAEAEKMPEPDTKLDILFEDIYV 351 >gi|261749597|ref|YP_003257283.1| pyruvate dehydrogenase E1 component subunit alpha [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497690|gb|ACX84140.1| pyruvate dehydrogenase E1 component, alpha subunit [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 334 Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 134/321 (41%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EG 102 + E E L ++ M R+FE+K LY + GF HL GQEA+ G+ ++ Sbjct: 1 MKEITTETYLKWFQDMSFWRKFEDKCRSLYLKRKIRGFLHLYNGQEALPAGLTYAMDMSK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D++ITAYR H ++ GV+ K+MAEL G+ G S G GGSMH+FS K+ FYGGHGIVG Sbjct: 61 DKIITAYRCHILPISMGVNPKKVMAELLGKVTGTSHGMGGSMHIFSKKHRFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG GIAFA+KY D + + GDGA QG ++E+FN+A +W L V+++ ENNQYAM Sbjct: 121 QIPLGAGIAFADKYFNRDAVTLTLMGDGAIRQGALHETFNMAMIWKLPVVFICENNQYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R++ K G S+ +P VDGMD + A+ R+ G +++ TY Sbjct: 181 GTSVKRSTNIEEIYKIGHSYGMPSFPVDGMDPEKIAKAAYIAIERARSGNGSTFLDIKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YR++EE++ DPI +++K ++ NKW + L IE ++K ++ Sbjct: 241 RYRGHSMSDTESYRSKEEVHSY-KKKDPILKLKKIIIQNKWETIEWLNSIENKIKKEVDT 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 VEFA++ +P +Y + Sbjct: 300 CVEFAENSDDPSLEHMYDVVY 320 >gi|228477405|ref|ZP_04062041.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus salivarius SK126] gi|228250840|gb|EEK10028.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus salivarius SK126] Length = 323 Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 120/322 (37%), Positives = 186/322 (57%), Gaps = 1/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + +KE L + M IR F+ + +L G V G H +G+EA VG L+ D Sbjct: 1 MVKLSKETHLEMFTKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVQHLSYDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 61 IFFSNHRGHGQSIAQDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y+ + I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYKETGNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +A+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ +Y Sbjct: 181 MDIHKATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVEHVRGGNGPAIVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE++E ++N+DPI + R L+ AS +L I+ V+ ++ Sbjct: 241 RWFGHSTADAGVYRTKEEVDEWKNNNDPIIKYRDYLVAENIASAEELDAIQSQVKAEVDA 300 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 + EFAQ+ +P+ + + D+ + Sbjct: 301 AYEFAQNSPDPELSVAFEDVWV 322 >gi|24378645|ref|NP_720600.1| putative acetoin dehydrogenase (TPP-dependent), E1 component alpha subunit [Streptococcus mutans UA159] gi|24376504|gb|AAN57906.1|AE014864_4 putative acetoin dehydrogenase (TPP-dependent), E1 component alpha subunit [Streptococcus mutans UA159] Length = 331 Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 118/322 (36%), Positives = 188/322 (58%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 ++ +K+Q L + M IR + K +L G V G H +G+EA VG LT+ D Sbjct: 10 IAMLSKKQYLDMFLKMQRIRDVDTKLNKLVRRGFVQGMTHFSVGEEAASVGAIQGLTDQD 69 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A G+D + AEL G+ G SKG+GGSMH+ + + G YG +GIVG Sbjct: 70 IIFSNHRGHGQTIAKGIDIPAMFAELAGKATGSSKGRGGSMHLANLEKGNYGTNGIVGGG 129 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y + I V GD A N+G +ES N+AA+WNL VI+ I NN+Y + Sbjct: 130 YALAVGAALTQQYDNTGNIVVAFSGDSATNEGSFHESVNLAAVWNLPVIFFIINNRYGIS 189 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 T ++ ++ ++ R ++ IPG V DG D+ AV M + + Y R+ GP ++E+ +Y Sbjct: 190 TDINYSTKISHLYLRADAYGIPGHYVEDGNDVIAVYEKMQEVIDYVRSGNGPALVEVESY 249 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE++ ++ DP+++ R L NK A++ +L IE V + I + Sbjct: 250 RWFGHSTADAGAYRTKEEVDAWKAK-DPLKKYRTYLTENKIATDEELDMIEKEVAQEIED 308 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 +V+FAQ EP+ + + D+ + Sbjct: 309 AVKFAQDSPEPELSVAFEDVWV 330 >gi|33357459|pdb|1NI4|A Chain A, Human Pyruvate Dehydrogenase gi|33357461|pdb|1NI4|C Chain C, Human Pyruvate Dehydrogenase Length = 365 Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 171/345 (49%), Positives = 223/345 (64%), Gaps = 7/345 (2%) Query: 22 SAKRAATSSVDCVDIPFLE-GFEVSE-FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVG 79 S AT + D+ LE G V+ +E L YR +RR E KA QLY ++ Sbjct: 4 SFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRXXQTVRRXELKADQLYKQKIIR 63 Query: 80 GFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKG 139 GFCHLC GQEA VG++ + D +ITAYR HG G+ +I+AELTGR+GG +KG Sbjct: 64 GFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKG 123 Query: 140 KGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYE 199 KGGS H + FYGG+GIVGAQV LG GIA A KY D++C+ +GDGAANQGQ++E Sbjct: 124 KGGSXHXY--AKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFE 181 Query: 200 SFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKA 259 ++N AALW L I++ ENN+Y GTSV RA+A T++ KRG IPG++VDG DI V+ Sbjct: 182 AYNXAALWKLPCIFICENNRYGXGTSVERAAASTDYYKRGDF--IPGLRVDGXDILCVRE 239 Query: 260 TMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRL 318 A AYCR+ KGPI+ E+ TYRY GHS SDP +YRTREEI E+RS DPI ++ R Sbjct: 240 ATRFAAAYCRSGKGPILXELQTYRYHGHSXSDPGVSYRTREEIQEVRSKSDPIXLLKDRX 299 Query: 319 LHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +++ AS +LKEI++ VRK I ++ +FA +D EP EL I Sbjct: 300 VNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIY 344 >gi|115448577|ref|NP_001048068.1| Os02g0739600 [Oryza sativa Japonica Group] gi|46390562|dbj|BAD16048.1| putative pyruvate dehydrogenase E1 alpha subunit [Oryza sativa Japonica Group] gi|113537599|dbj|BAF09982.1| Os02g0739600 [Oryza sativa Japonica Group] gi|125583627|gb|EAZ24558.1| hypothetical protein OsJ_08320 [Oryza sativa Japonica Group] gi|215704394|dbj|BAG93828.1| unnamed protein product [Oryza sativa Japonica Group] Length = 390 Score = 336 bits (861), Expect = 5e-90, Method: Composition-based stats. Identities = 160/363 (44%), Positives = 224/363 (61%), Gaps = 14/363 (3%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLI 62 +A + ++ + + SV VD P + + L+ +R M ++ Sbjct: 21 IAARSISDSTAPLTIETSVPFTSH------IVDPPSRD----VTTTPAELLTFFRDMSVM 70 Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR E A LY ++ GFCHL GQEAV VGM+ ++T D +ITAYR+H LA G D Sbjct: 71 RRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDHCTYLARGGDL 130 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 AEL GRQ G S+GKGGSMH + FYGGHGIVGAQV LG G+AFA KYR+ + Sbjct: 131 VSAFAELMGRQAGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQKYRKEETA 190 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 +GDGAANQGQ++E+ NI+ALW L I V ENN Y MGT+ RA+ + KRG Sbjct: 191 TFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDY- 249 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEI 301 +PG++VDGMD+ AVK A + A+ GPI++EM TYRY GHSMSDP + YRTR+EI Sbjct: 250 -VPGLKVDGMDVLAVKQACKFAKEHAIAN-GPIVLEMDTYRYHGHSMSDPGSTYRTRDEI 307 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 + +R DPIE+VRK +L + A+ +LK++E +RK +++++ A+ PD +EL+++ Sbjct: 308 SGVRQERDPIERVRKLILAHDLATAAELKDMEKEIRKEVDDAIAKAKESPMPDTSELFTN 367 Query: 362 ILI 364 + + Sbjct: 368 VYV 370 >gi|157107633|ref|XP_001649868.1| pyruvate dehydrogenase [Aedes aegypti] gi|108868670|gb|EAT32895.1| pyruvate dehydrogenase [Aedes aegypti] Length = 371 Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats. Identities = 157/319 (49%), Positives = 211/319 (66%), Gaps = 6/319 (1%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 K+ L Y M IRR E AG LY ++ GFCHL GQEA VGM+ ++ D Sbjct: 29 TVTKDDALKYYSQMYAIRRMETAAGNLYKEKIIRGFCHLYSGQEACAVGMRAAMRPEDSC 88 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG GV ++AELTGRQ G ++GKGGSMHM+ + FYGG+GIVGAQV Sbjct: 89 ITAYRCHGWTYLMGVSMQGVLAELTGRQSGCARGKGGSMHMY--SHNFYGGNGIVGAQVP 146 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LG G AFA KY+ + +C+ +GDGAANQGQ++E +N+A LWN VI+V ENN Y MGTS Sbjct: 147 LGVG-AFAAKYKGTKGVCIAAYGDGAANQGQLFEVYNMAKLWNTPVIFVCENNGYGMGTS 205 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 RASA N+ RG + +PG+ VDGMD+ AV+ A+ +C + KGPI++E TYRY Sbjct: 206 AERASANVNYYTRGDT--VPGIWVDGMDVLAVREATKFAIDHCNSGKGPILLETATYRYS 263 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YR+R+EI E+R DPI +R+++L N+ A+ +LKEIE +R ++++ Sbjct: 264 GHSMSDPGTSYRSRDEIAEVRQTRDPITSLREKILTNELATTEELKEIESKIRGEVDSAT 323 Query: 345 EFAQSDKEPDPAELYSDIL 363 + A++D+E EL +DI Sbjct: 324 KVAKADREIPVDELCTDIY 342 >gi|242062580|ref|XP_002452579.1| hypothetical protein SORBIDRAFT_04g028450 [Sorghum bicolor] gi|241932410|gb|EES05555.1| hypothetical protein SORBIDRAFT_04g028450 [Sorghum bicolor] Length = 390 Score = 335 bits (860), Expect = 6e-90, Method: Composition-based stats. Identities = 160/363 (44%), Positives = 225/363 (61%), Gaps = 14/363 (3%) Query: 2 YVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLL 61 ++A + ++ + + SV VD P + + ++ +R M L Sbjct: 20 FMAARPISDSTAALTIETSVPFTSH------LVDPPSRD----VTTTPAELVTFFRDMSL 69 Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 +RR E A LY ++ GFCHL GQEAV VGM+ ++T D +ITAYR+H LA G D Sbjct: 70 MRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDHCTYLARGGD 129 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 +EL GR+GG S+GKGGSMH + FYGGHGIVGAQV LG G+AFA KY++ D Sbjct: 130 LVSAFSELMGREGGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQKYKKEDT 189 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 +GDGAANQGQ++E+ NI+ALW L I V ENN Y MGT+ RA+ + KRG Sbjct: 190 ATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDY 249 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREE 300 +PG++VDGMD+ AVK A + A+ GPI++EM TYRY GHSMSDP + YRTR+E Sbjct: 250 --VPGLKVDGMDVLAVKQACKFAKDHAVAN-GPIVLEMDTYRYHGHSMSDPGSTYRTRDE 306 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 I+ +R DPIE+VRK LL + A+ +LK++E +RK +++++ A+ PD +EL++ Sbjct: 307 ISGVRQERDPIERVRKLLLTHDLATAAELKDMEKEIRKQVDDAIAKAKESSMPDTSELFT 366 Query: 361 DIL 363 ++ Sbjct: 367 NVY 369 >gi|86607798|ref|YP_476560.1| dehydrogenase E1 component, alpha subunit [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556340|gb|ABD01297.1| dehydrogenase E1 component, alpha subunit [Synechococcus sp. JA-2-3B'a(2-13)] Length = 333 Score = 335 bits (860), Expect = 6e-90, Method: Composition-based stats. Identities = 132/320 (41%), Positives = 196/320 (61%), Gaps = 1/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + E+ Y M+L R FE+K ++Y G + GF HL GQEAV G+ +L D Sbjct: 11 TARISAEEARLLYEDMVLGRLFEDKCAEMYYKGKMFGFVHLYNGQEAVSTGVIKALKPTD 70 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + YR+H H L+ G+ +MAEL G+ G SKG+GGSMH+FS ++ F GG+ V Sbjct: 71 YVCSTYRDHVHALSTGIPPRAVMAELFGKATGCSKGRGGSMHLFSAEHNFLGGYAFVAEG 130 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + + TG AF+ KYR +D++ FGDGA N GQ YE N+AALW L +IYV+ENN +A+G Sbjct: 131 IPVATGAAFSAKYRGTDQVTACFFGDGACNNGQFYECLNMAALWKLPIIYVVENNFWAIG 190 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 + RA++ T+ ++G +F +PG QVDGMD+ AV+ +A+A RA +GP ++E +TYR Sbjct: 191 MAHERATSDTDIYRKGPAFGMPGYQVDGMDVLAVREAAQQAIARARAGEGPTLLECITYR 250 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 +RGHS++DP R+ EE R DPI+Q+ + L + +E D + I V +I ++ Sbjct: 251 FRGHSLADPDELRSPEEKEFWR-QRDPIKQLERYALEHNLMTEADFQAIHAEVSAVIEDA 309 Query: 344 VEFAQSDKEPDPAELYSDIL 363 V FA EP EL+ + Sbjct: 310 VLFALESPEPTLDELHRFVF 329 >gi|195978331|ref|YP_002123575.1| pyruvate dehydrogenase E1 component alpha subunit PdhA [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975036|gb|ACG62562.1| pyruvate dehydrogenase E1 component alpha subunit PdhA [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 326 Score = 335 bits (860), Expect = 6e-90, Method: Composition-based stats. Identities = 121/323 (37%), Positives = 188/323 (58%), Gaps = 2/323 (0%) Query: 43 EVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEG 102 E+ +KEQ L + M IR F+ + +L G V G H +G+EA VG LT Sbjct: 4 EMVTVSKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLTYD 63 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 64 DIIFSNHRGHGQSIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTNGIVGG 123 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 +L G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 124 GYALAVGAALTQQYKGTNNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGI 183 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLT 281 S++ A+ + R ++ IPG DG D+ AV TM KAV + R GP ++E+ + Sbjct: 184 SMSINNATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYETMSKAVEHVRGGNGPAVVEVES 243 Query: 282 YRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIIN 341 YR+ GHS +D YRT+EE++E + DP+ + R L A++ +L ++ V++ I+ Sbjct: 244 YRWFGHSTADAGKYRTKEEVDEWKEK-DPMLKYRAYLTGEGIATDEELDALQAQVKQEID 302 Query: 342 NSVEFAQSDKEPDPAELYSDILI 364 + EFAQ+ +PD + + D+ + Sbjct: 303 AAYEFAQNSPDPDISVAFEDVWV 325 >gi|56698609|ref|YP_168986.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Ruegeria pomeroyi DSS-3] gi|56680346|gb|AAV97012.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Ruegeria pomeroyi DSS-3] Length = 326 Score = 335 bits (860), Expect = 6e-90, Method: Composition-based stats. Identities = 123/319 (38%), Positives = 173/319 (54%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 K+ L AYR M IR FEE+ +G G + GF HL G+EA VG+ M L + D++ Sbjct: 6 PLEKDGLLEAYRRMKTIREFEERLHVDFGRGDIPGFVHLYAGEEAAGVGIMMHLKDLDRI 65 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GVD +MAE+ G+ G GKGGSMH+ G G +GI+GA Sbjct: 66 ASTHRGHGHCIAKGVDVKGMMAEIYGKSTGSCAGKGGSMHIADLSKGMMGANGILGAGAP 125 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A A + D + + FGDGA+NQG V ES N+AA+WNL I+V+ENN YA TS Sbjct: 126 LVCGAALAAQKLGHDGVGITFFGDGASNQGTVLESMNLAAIWNLPAIFVVENNGYAESTS 185 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V A A ++ R F +PG+ VDG D AV + V R GP ++E R+ Sbjct: 186 VDYAVASDSYVDRATGFGMPGITVDGTDFFAVYEAAGEVVKRAREGGGPTLLECKMIRFF 245 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR E + R N D ++ R ++ + +L I+ V +I ++V Sbjct: 246 GHFEGDAQTYRAPGENEDNRKNRDCLKIFRAKVTEAGVLTNAELDAIDAEVATLIEDAVR 305 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ P PAEL +D+ + Sbjct: 306 EAKAAPLPTPAELTTDVYV 324 >gi|119387707|ref|YP_918741.1| pyruvate dehydrogenase (acetyl-transferring) [Paracoccus denitrificans PD1222] gi|119378282|gb|ABL73045.1| Pyruvate dehydrogenase (acetyl-transferring) [Paracoccus denitrificans PD1222] Length = 325 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 122/319 (38%), Positives = 177/319 (55%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 KEQ L AYR M IR FEE+ + G + GF HL G+EA VG+ M L + D++ Sbjct: 6 PLPKEQLLDAYRKMKTIRDFEERLHVDFARGEIPGFVHLYAGEEATAVGIMMHLHDRDRI 65 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GVD +MAE+ G+ G GKGGSMH+ G G +GI+GA Sbjct: 66 ASTHRGHGHCIAKGVDVKAMMAEIYGKATGCCAGKGGSMHIADLSLGMMGANGILGAGAP 125 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A A + D + + FGDGA+NQG V ES N+AA+WNL I+V+ENN YA TS Sbjct: 126 LVCGAALAAQKLGHDGVGITFFGDGASNQGTVLESMNLAAIWNLPAIFVVENNGYAESTS 185 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V A+A ++ R F +PG+ VDG+D AV + + R GP ++E R+ Sbjct: 186 VDYATASDSYVDRATGFGMPGITVDGLDFFAVYEAAGEVIRRAREGAGPTLLECKNVRFF 245 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D Y+ E R+N+D ++ R+++ SE +L I+ V ++I+ +V Sbjct: 246 GHFEGDAQTYKAPGENEYNRANNDCLKLFRQKVTEAGVISESELDAIDAEVAQLIDEAVA 305 Query: 346 FAQSDKEPDPAELYSDILI 364 A + P P +L +D+ + Sbjct: 306 EAIAAPLPGPEQLTTDVYV 324 >gi|221129918|ref|XP_002162893.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 405 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 161/362 (44%), Positives = 229/362 (63%), Gaps = 12/362 (3%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSE---FNKEQELSAYRLMLLI 62 ++ KMA S SA+ L+G E+ ++Q + YR M +I Sbjct: 26 PPMSFQLCKMATVSSQSAE----FLCQPYKYHKLDGHEIPSSGLVTRDQAMDYYRKMAVI 81 Query: 63 RRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDA 122 RR E++A +LY + GFCHL GQEA VG+ L D +ITAYR HG G Sbjct: 82 RRMEQEASKLYKEKFIRGFCHLYSGQEATCVGINDQLDNDDSVITAYRAHGWTYIKGRTV 141 Query: 123 SKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKI 182 +++++ELTGR+ G ++GKGGSMHM++ + FYGG+GIVGAQV LG GIA A++YR + Sbjct: 142 AQVLSELTGRKTGCTEGKGGSMHMYAHE--FYGGNGIVGAQVPLGAGIALAHQYRNNGHC 199 Query: 183 CVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSF 242 CV +GDGAANQGQV+E+FN+AALW+L I+V+ENN Y MGTS SR+S + RG Sbjct: 200 CVTLYGDGAANQGQVFEAFNMAALWHLPCIFVVENNGYGMGTSSSRSSFVNEYYTRGDY- 258 Query: 243 NIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEI 301 IPG+QVDG + +V+ AV + ++ KGPI++E TYRY GHSMSDP YRTR+E+ Sbjct: 259 -IPGIQVDGNCVVSVREAAKFAVHWTKSGKGPILLECNTYRYFGHSMSDPGTSYRTRDEV 317 Query: 302 NEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSD 361 EMR DPI ++++L++K +E + K I+ +V++ ++ +VE A+SD EPD ++ Sbjct: 318 QEMRLKRDPIASFKEKILNSKLLNEDNFKAIDKSVKEEVDLAVESARSDPEPDVNDMALY 377 Query: 362 IL 363 I Sbjct: 378 IY 379 >gi|195626472|gb|ACG35066.1| pyruvate dehydrogenase E1 component alpha subunit [Zea mays] Length = 390 Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats. Identities = 159/363 (43%), Positives = 224/363 (61%), Gaps = 14/363 (3%) Query: 2 YVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLL 61 ++A + V+ + + SV VD P + + ++ +R M L Sbjct: 20 FMAARPVSDSTAALTIETSVPFTSH------LVDPPSRD----VTTTPAELVTFFRDMSL 69 Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 +RR E A LY ++ GFCHL GQEAV VGM+ ++T D +ITAYR+H LA G D Sbjct: 70 MRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDHCTYLARGGD 129 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 +EL GR+GG S+GKGGSMH + FYGGHGIVGAQV LG G+AFA KY++ + Sbjct: 130 LVSAFSELMGREGGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQKYKKEET 189 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 +GD AANQGQ++E+ NI+ALW L I V ENN Y MGT+ RA+ + KRG Sbjct: 190 ATFALYGDCAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDY 249 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREE 300 +PG++VDGMD+ AVK A + A+ GPI++EM TYRY GHSMSDP + YRTR+E Sbjct: 250 --VPGLKVDGMDVLAVKQACKFAKDHAVAN-GPIVLEMDTYRYHGHSMSDPGSTYRTRDE 306 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 I+ +R DPIE+VRK LL + A+ +LK++E +RK +++++ A+ PD +EL++ Sbjct: 307 ISGVRQERDPIERVRKLLLAHDLATAAELKDMEKEIRKQVDDAIAKAKESSMPDTSELFT 366 Query: 361 DIL 363 ++ Sbjct: 367 NVY 369 >gi|157136707|ref|XP_001656885.1| pyruvate dehydrogenase [Aedes aegypti] gi|108869893|gb|EAT34118.1| pyruvate dehydrogenase [Aedes aegypti] Length = 387 Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats. Identities = 147/320 (45%), Positives = 212/320 (66%), Gaps = 6/320 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 +++ L+ Y M IRR E AG LY +V GFCHL GQEA VGM ++ D Sbjct: 45 KTVTRDEALAYYSAMQKIRRLETSAGNLYKEKIVRGFCHLYSGQEACAVGMNAAMRPQDN 104 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +I+AYR HG GVD +++ELTG+QGG ++GKGGSMHM++ FYGG+GIVGAQV Sbjct: 105 IISAYRVHGWTHLMGVDVKGVLSELTGKQGGCARGKGGSMHMYAP--NFYGGNGIVGAQV 162 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+A A KY+ ++ +C+ +GDGA+NQGQV+E++N+A LWNL I+V ENN Y MGT Sbjct: 163 PLGAGVALACKYKGNNGVCLSLYGDGASNQGQVFEAYNMAYLWNLPCIFVCENNGYGMGT 222 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S R+S TN+ +RG +PG+ VDGMD+ AVK D A+ Y + GP+++E+ TYRY Sbjct: 223 SADRSSCNTNYYQRGDV--LPGLWVDGMDVVAVKLATDFAIDYVLKN-GPLVMEVYTYRY 279 Query: 285 RGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 GHSMSDP YRTR+E+ E+R DPI + ++++ + +LK+I+ +++K ++ + Sbjct: 280 SGHSMSDPGTSYRTRDEVQEVRQTRDPISSFKDKIINAGLVTADELKKIDADIKKEVDEA 339 Query: 344 VEFAQSDKEPDPAELYSDIL 363 A++D E EL +D+ Sbjct: 340 TAAAKADTEIGLPELSTDVY 359 >gi|55821076|ref|YP_139518.1| acetoin dehydrogenase complex, E1 component subunit alpha [Streptococcus thermophilus LMG 18311] gi|55823002|ref|YP_141443.1| acetoin dehydrogenase complex, E1 component subunit alpha [Streptococcus thermophilus CNRZ1066] gi|55737061|gb|AAV60703.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus thermophilus LMG 18311] gi|55738987|gb|AAV62628.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus thermophilus CNRZ1066] Length = 323 Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats. Identities = 120/322 (37%), Positives = 186/322 (57%), Gaps = 1/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + +KE L + M IR F+ + +L G V G H +G+EA VG L+ D Sbjct: 1 MVKLSKETHLEMFTKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVQHLSYDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 61 IFFSNHRGHGQSIAQDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y+ + I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYKETGNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + RA+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ +Y Sbjct: 181 MDIRRATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYDTMGKAVDHVRGGNGPAIVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE++E ++N+DPI + R L+ AS +L I+ V+ ++ Sbjct: 241 RWFGHSTADAGVYRTKEEVDEWKNNNDPIIRYRDYLVSENIASVEELDAIQSQVKAQVDA 300 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 + EFA++ +P+ + + D+ + Sbjct: 301 AYEFAKNSPDPELSVAFEDVWV 322 >gi|256370810|ref|YP_003108635.1| pyruvate dehydrogenase E1 component subunit alpha [Candidatus Sulcia muelleri SMDSEM] gi|256009602|gb|ACU52962.1| pyruvate dehydrogenase E1 component, alpha subunit [Candidatus Sulcia muelleri SMDSEM] Length = 333 Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats. Identities = 142/321 (44%), Positives = 199/321 (61%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EG 102 + + + + L ++ M R+FE+K LY + GF HL GQEA+ G+ ++ + Sbjct: 1 MKKISNDIYLKWFKDMSFWRKFEDKCRSLYLKQKIRGFLHLYNGQEAIPAGLVQAMDLKK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H +A GV+ KIMAEL G+ G S G GGSMH+FS K FYGGHGIVG Sbjct: 61 DKMITAYRCHILPIAMGVNPKKIMAELFGKNTGTSCGMGGSMHIFSKKYRFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ +G GIAFA+KY D + + GDGA NQG ++E+FN+A +W L V+++ ENN+YAM Sbjct: 121 QIPIGAGIAFADKYFFRDAVTLTLMGDGAVNQGSLHETFNMAMIWKLPVVFICENNRYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R+S K G+++ +P VDGMD + A+ R KGP +++ TY Sbjct: 181 GTSVKRSSNIEEIYKIGLAYKMPSFCVDGMDPIKIYEHASNAIEKARKGKGPTFLDLRTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YR+++EINE +S DPI ++K +L NK SE L E + + K I Sbjct: 241 RYRGHSMSDSESYRSKKEINEFKS-RDPILLIKKYILDNKLVSEKILNEFKDEINKKIEE 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 V FA+ P+ +LYS + Sbjct: 300 CVNFAEMSNSPNEEKLYSVVY 320 >gi|255718725|ref|XP_002555643.1| KLTH0G14058p [Lachancea thermotolerans] gi|238937027|emb|CAR25206.1| KLTH0G14058p [Lachancea thermotolerans] Length = 413 Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats. Identities = 154/355 (43%), Positives = 219/355 (61%), Gaps = 15/355 (4%) Query: 21 VSAKRAATSSVDCVDIP--FLEGF--EVSEF----NKEQELSAYRLMLLIRRFEEKAGQL 72 SA A + +P EG+ EV + +K L Y+ M++ RR E L Sbjct: 35 ASASEAPADEAVEITLPESSFEGYMLEVPDLTYTTSKSVLLQMYKDMVITRRMEMACDAL 94 Query: 73 YGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGR 132 Y + GFCHL +GQEA+ VG++ ++T+ D +IT+YR H G ++AEL GR Sbjct: 95 YKAKKIRGFCHLTVGQEAIAVGIENAITKKDTVITSYRCHSFTYMRGASVQAVLAELMGR 154 Query: 133 QGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAA 192 + G+S GKGGSMH+++ GFYGG+GIVGAQV LG G+AFA++Y+ D +GDGA+ Sbjct: 155 RSGVSYGKGGSMHLYAP--GFYGGNGIVGAQVPLGAGLAFAHQYKNEDACTFDLYGDGAS 212 Query: 193 NQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGM 252 NQGQV+ESFN+A L+NL ++ ENN+Y MGT+ SR+SA T + KRG IPG++V+GM Sbjct: 213 NQGQVFESFNMAKLYNLPCVFACENNKYGMGTAASRSSAMTEYFKRGQY--IPGLKVNGM 270 Query: 253 DIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPI 311 DI AV A +C + KGP+++E TYRY GHSMSDP YRTR+EI MRS +DPI Sbjct: 271 DILAVYQASKFAKDWCVSGKGPLVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPI 330 Query: 312 EQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AELYSDILI 364 ++ L+ A+E ++K + RK ++ VE A + P+ + L+ D+ I Sbjct: 331 AGLKMYLMELNIATEEEIKAYDKAARKYVDEQVELADASPAPEAKMSILFEDVYI 385 >gi|317032267|ref|XP_001394447.2| pyruvate dehydrogenase E1 component subunit alpha [Aspergillus niger CBS 513.88] Length = 400 Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 210/353 (59%), Gaps = 13/353 (3%) Query: 20 SVSAKRAATSSVDCVDIPF----LEGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYG 74 + + SV D F L+ S E K Q Y M LIRR E A +LY Sbjct: 33 DLPTEENKPFSVPIADDSFETYNLDPPPYSLETTKSQLKQLYYDMSLIRRMELAADKLYK 92 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 + GFCHL GQEAV VG++ ++ D++ITAYR HG L G I+ EL GR+ Sbjct: 93 EQKIRGFCHLSTGQEAVAVGVEHGISPEDKVITAYRAHGFTLMRGGSVKSIIGELLGRRD 152 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 GI GKGGS+HMF+ F+GG+GIVG+ V LGTGIAFA +Y + K+ V +GDGAANQ Sbjct: 153 GICHGKGGSVHMFTK--NFFGGNGIVGSNVPLGTGIAFAQQYDDTKKVTVNLYGDGAANQ 210 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 GQV+E++N+A LW L VI+ ENN+Y MGTSV RASA T + KR + IPG++++GMD+ Sbjct: 211 GQVHEAYNMAKLWELPVIFGCENNKYGMGTSVERASAMTEYYKR--GYYIPGLRINGMDV 268 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQ 313 AV A M Y GP++ E TYRY GHS+SDP YR+R+E+ R+N DPI Sbjct: 269 LAVIAAMKYGKDYVLGGNGPLLYEFQTYRYAGHSVSDPGTAYRSRDEVQAERAN-DPITT 327 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAE--LYSDILI 364 R++++ SE D+K ++ +R ++ + A+ EP L+ DI + Sbjct: 328 YREKMIEWGVLSEDDVKTMDKEIRSKVDREAQEAEKMAEPPLNSDVLFEDIYV 380 >gi|195447244|ref|XP_002071127.1| GK25307 [Drosophila willistoni] gi|194167212|gb|EDW82113.1| GK25307 [Drosophila willistoni] Length = 632 Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats. Identities = 154/336 (45%), Positives = 216/336 (64%), Gaps = 7/336 (2%) Query: 29 SSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQ 88 ++ C D+ +V E ++E LS Y M+ +RR E A + Y + GFCHL GQ Sbjct: 60 NTFKCYDLETGPPLDV-ELSREDALSMYTKMVEVRRLEIIAAEFYKQKKIRGFCHLYNGQ 118 Query: 89 EAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFS 148 EAV VGM + + D +ITAYR H GV ++AEL G + G S+GKGGSMHM+ Sbjct: 119 EAVAVGMTSVMRKTDTVITAYRCHAWTYLMGVSMYALLAELLGVRTGCSRGKGGSMHMY- 177 Query: 149 TKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWN 208 + +YGG+GIVGAQV +G GIA A++Y+ D +C+VC+GDGAANQGQ++E++N+A LW Sbjct: 178 -ADNYYGGNGIVGAQVPMGAGIALAHRYKDDDGVCIVCYGDGAANQGQIFEAYNMAKLWC 236 Query: 209 LNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYC 268 L I+V ENN+Y MGT SRASA T+F RG IPG+ VDG + AV++ A+ + Sbjct: 237 LPCIFVCENNEYGMGTETSRASANTDFYMRGQY--IPGLWVDGNQVLAVRSATQFAIDFA 294 Query: 269 RAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 +++ GPI++EM TYRY GHSMSDP YRTR+E+ +R DPI R +++ ASE Sbjct: 295 QSN-GPIVLEMFTYRYMGHSMSDPGTSYRTRDEVQNVRETRDPITNFRNQVVRLCLASEE 353 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +LK+I+ NV+K + + A D+E D EL +D+ Sbjct: 354 ELKQIDDNVKKQVGLDAKKALQDREVDEHELTADVY 389 >gi|167567524|ref|ZP_02360440.1| dehydrogenase E1 component [Burkholderia oklahomensis EO147] gi|167569699|ref|ZP_02362573.1| dehydrogenase E1 component [Burkholderia oklahomensis C6786] Length = 327 Score = 335 bits (859), Expect = 8e-90, Method: Composition-based stats. Identities = 125/319 (39%), Positives = 186/319 (58%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + +++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L++ D + Sbjct: 6 QLGRDRLLEAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGAMLHLSDVDYV 65 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 T +R HGH +A GVD +MAE+ GR+ G+ GKGGSMH+ G G +GIVGA Sbjct: 66 ATTHRGHGHCIAKGVDVRSMMAEIYGRKTGVCHGKGGSMHIADLSKGMLGANGIVGAGGP 125 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A A K R + + V FGDGA+NQG V+ES N+A++W L I+V ENN YA T+ Sbjct: 126 LVCGAALAAKLRETGGVGVCFFGDGASNQGVVFESMNLASVWRLPAIFVAENNGYAEATA 185 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 186 SSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARGGGGPTLVEVKFSRYF 245 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR E+ ++R D +++ +R++ + + DL+ I+ V K+I+++V Sbjct: 246 GHFEGDAQTYRAPGEVQKLRDEKDCLKRFEERVVRAEALTREDLRAIDAAVAKLIDDAVA 305 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 306 EAKAAPLPDAADLLTDVYV 324 >gi|322372933|ref|ZP_08047469.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. C150] gi|321277975|gb|EFX55044.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus sp. C150] Length = 323 Score = 335 bits (859), Expect = 8e-90, Method: Composition-based stats. Identities = 121/322 (37%), Positives = 188/322 (58%), Gaps = 1/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + +KE L + M IR F+ + +L G V G H +G+EA VG L+ D Sbjct: 1 MIKLSKETHLEMFTKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVQHLSYDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 61 IFFSNHRGHGQSIAQDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y+ + I V GDGA N+G +ES N+A+ W L VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYKETGNIVVAFSGDGATNEGSFHESVNMASAWKLPVIFFIINNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + RA+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ +Y Sbjct: 181 MDIHRATNTPHLYTRAEAYGIPGFYCQDGNDVMAVYETMGKAVEHVRGGNGPAIVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE++E ++++DPI + R L+ K AS+ +L I+ V+ I+ Sbjct: 241 RWFGHSTADAGVYRTKEEVDEWKNHNDPIIKYRNYLVSEKIASDEELDAIQSQVKAQIDA 300 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 + EFAQ+ +P+ + + D+ + Sbjct: 301 AYEFAQNSPDPELSIAFEDVWV 322 >gi|302656370|ref|XP_003019939.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Trichophyton verrucosum HKI 0517] gi|291183715|gb|EFE39315.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Trichophyton verrucosum HKI 0517] Length = 416 Score = 335 bits (859), Expect = 8e-90, Method: Composition-based stats. Identities = 156/382 (40%), Positives = 219/382 (57%), Gaps = 31/382 (8%) Query: 6 QDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEF---------NKEQELSAY 56 + D A + + SV D E FE E K++ Y Sbjct: 24 RRSVTTDAASAHAEDIPVEDDKPFSVKLSD----ESFETYELDPPPYTLKTTKKELKQMY 79 Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 M+ IRR E A +LY + GFCHL GQEAV G++ ++T D++ITAYR HG + Sbjct: 80 YDMVSIRRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAITPDDKLITAYRCHGFAM 139 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G I+ EL GR+ GI+ GKGGSMHMF F+GG+GIVGAQV +G G+AFA +Y Sbjct: 140 MRGGTVRSIIGELLGRREGIAYGKGGSMHMF--AKNFFGGNGIVGAQVPVGAGLAFAQQY 197 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE-----------NNQYAMGTS 225 + +GDGA+NQGQV+E+FN+A LWNL VI+ E +N+Y MGT+ Sbjct: 198 NGEANTTICLYGDGASNQGQVFEAFNMAKLWNLPVIFGCESTFQIVFYPFLDNKYGMGTA 257 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +R+SA T++ KRG IPG++++GMD+ A+KA + Y + +GP++ E +TYRY Sbjct: 258 ANRSSALTDYYKRGQY--IPGIKINGMDVLAIKAAVQYGREYTVSGQGPLVFEYVTYRYG 315 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YRTREEI MRS +DPI ++++LL SE +LK I+ + R +++ V Sbjct: 316 GHSMSDPGTTYRTREEIQRMRSTNDPIAGLKQKLLDWNITSEEELKAIDKDARSMVDEEV 375 Query: 345 EFAQSDKEPDPAE--LYSDILI 364 A+ PD L+ DI + Sbjct: 376 AIAEKMPVPDATSRILFEDIYV 397 >gi|324515184|gb|ADY46115.1| Pyruvate dehydrogenase E1 component subunit alpha type II [Ascaris suum] Length = 401 Score = 335 bits (859), Expect = 8e-90, Method: Composition-based stats. Identities = 153/360 (42%), Positives = 214/360 (59%), Gaps = 9/360 (2%) Query: 9 TVGDIKMALNPSVSAKRAATSSV--DCVDIPFLEGFEVSEFN--KEQELSAYRLMLLIRR 64 V L P +S + A+++ V + +E +E ++ L+ Y M IRR Sbjct: 15 RVTATCRFLPPLISHRFASSARVQVKPYKLHNVESGPNAEVTVTRDDALNIYTRMQTIRR 74 Query: 65 FEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASK 124 E AG LY + GFCHL G+EA VG+K ++ D +IT+YR HG CG Sbjct: 75 LEAAAGNLYKEQKIRGFCHLYAGEEACAVGIKSAMEPNDAIITSYRCHGWTYLCGPSVVP 134 Query: 125 IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 ++ ELTGR G GKGGSMHM+ + FYGG+GIVGAQ LGTG+AFA K R+ +C Sbjct: 135 VLCELTGRMNGNVHGKGGSMHMYG--DNFYGGNGIVGAQQPLGTGVAFAMKCRKMKNVCF 192 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 FGDGAANQGQ++ES NIA LWN+ V+YV ENN Y GTS RA A ++ R + Sbjct: 193 TLFGDGAANQGQLFESMNIAKLWNIPVVYVCENNGYGFGTSTKRACAAKHYYDRVSY--M 250 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINE 303 PG+ VDGMD+ AV+ A +C A KGP+++EM TYRY GHS++DP YRTREE+ E Sbjct: 251 PGVWVDGMDVLAVREAARWAKEWCNAGKGPLMLEMSTYRYGGHSVADPGTSYRTREEVEE 310 Query: 304 MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +R D I +++++ +E +LKEI+ +RK ++ + + A++ KE L +D+ Sbjct: 311 VRRTRDAINGFKEKIIPTGLLTEDELKEIDKKIRKEVDEAAKMARTGKEATTDLLLTDLY 370 >gi|330790328|ref|XP_003283249.1| pyruvate dehydrogenase E1 alpha subunit [Dictyostelium purpureum] gi|325086796|gb|EGC40180.1| pyruvate dehydrogenase E1 alpha subunit [Dictyostelium purpureum] Length = 377 Score = 335 bits (859), Expect = 8e-90, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 219/325 (67%), Gaps = 5/325 (1%) Query: 41 GFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT 100 + NKE+ ++ + M +R+ E A LY ++ GFCHL GQEAV G++ S+T Sbjct: 41 PANTTTTNKEELMNYFTEMTRMRKLETVADGLYKKKLIRGFCHLYNGQEAVCAGLEYSVT 100 Query: 101 EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIV 160 + D +ITAYR+H ++L+ G +I AEL ++ G SKGKGGSMHMF+ FYGG+GIV Sbjct: 101 KEDHIITAYRDHTYMLSRGATPEEIFAELLMKETGCSKGKGGSMHMFTR--NFYGGNGIV 158 Query: 161 GAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQY 220 GAQ +GTGIAFA KY ++ +C+ +GDGAANQGQ++E+FN+A LW L VI+V ENN Y Sbjct: 159 GAQCPVGTGIAFAQKYNKTGNVCLTLYGDGAANQGQLFEAFNMAELWKLPVIFVCENNHY 218 Query: 221 AMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEML 280 MGTS RA+A +F R + IPG++VDGMDI AV+ A + RA KGP+++EM Sbjct: 219 GMGTSQKRAAAGHDFYTR--AHYIPGLKVDGMDIFAVREAGKYAADWARAGKGPMVLEMD 276 Query: 281 TYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 TYRY GHSMSDP YRTREEIN +R N DPIE +R +L NK+A+E +L IE V++ Sbjct: 277 TYRYVGHSMSDPGITYRTREEINSVRQNRDPIENLRNIILANKFATEDELTTIEDTVKQE 336 Query: 340 INNSVEFAQSDKEPDPAELYSDILI 364 ++ + + A + P ELY+++ I Sbjct: 337 MDVAADKAIAAPFPQAKELYTNVYI 361 >gi|294661177|ref|YP_003573052.1| hypothetical protein Aasi_1605 [Candidatus Amoebophilus asiaticus 5a2] gi|227336327|gb|ACP20924.1| hypothetical protein Aasi_1605 [Candidatus Amoebophilus asiaticus 5a2] Length = 345 Score = 335 bits (859), Expect = 8e-90, Method: Composition-based stats. Identities = 152/318 (47%), Positives = 204/318 (64%), Gaps = 2/318 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 ++KE L Y MLL+R+FEEK+GQLYG + GFCHL GQEA I G +L GD+ I Sbjct: 21 YSKEIYLFWYERMLLMRKFEEKSGQLYGQQKIKGFCHLYNGQEACIAGAVTALQPGDKYI 80 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR+H H +A G D IMAEL GR GISKGKGGSMH+F + F+GGHGIVG Q+ L Sbjct: 81 TAYRDHAHPIALGTDVKYIMAELYGRATGISKGKGGSMHIFDKEKNFFGGHGIVGGQIPL 140 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G GIAFA KY+ ++ +C+ GDGA QG +E+ N+A L+ L VI+VIENN YAMGTSV Sbjct: 141 GVGIAFAEKYKGTNNLCITFMGDGAVRQGAFHEALNLAMLYELPVIFVIENNGYAMGTSV 200 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R+S T K G ++++ V M++ V + +A R P ++E TYRY+G Sbjct: 201 QRSSNLTELYKLGSAYDMYSEAVQAMEVEKVHEAVSQAAERARKG-IPSLLEFKTYRYKG 259 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS+SDPA YR +EE+ R D IE VR +L N+ ASE ++ I+ + + I +V+F Sbjct: 260 HSISDPATYRDKEELETHR-QRDSIEAVRNTILVNRIASEEEISGIDERINQEIIAAVKF 318 Query: 347 AQSDKEPDPAELYSDILI 364 A+ P+P E Y D+ + Sbjct: 319 AEESDFPNPEEAYQDVYV 336 >gi|15675025|ref|NP_269199.1| putative acetoin dehydrogenase (TPP-dependent) subunit alpha [Streptococcus pyogenes M1 GAS] gi|71910564|ref|YP_282114.1| pyruvate dehydrogenase E1 component subunit alpha [Streptococcus pyogenes MGAS5005] gi|13622175|gb|AAK33920.1| putative acetoin dehydrogenase (TPP-dependent) alpha chain [Streptococcus pyogenes M1 GAS] gi|71853346|gb|AAZ51369.1| pyruvate dehydrogenase E1 component alpha subunit [Streptococcus pyogenes MGAS5005] Length = 322 Score = 335 bits (859), Expect = 8e-90, Method: Composition-based stats. Identities = 119/322 (36%), Positives = 188/322 (58%), Gaps = 2/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + +KEQ L + M IR F+ + +L G V G H +G+EA VG L+ D Sbjct: 1 MVTVSKEQHLDMFLKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVAHLSYDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 61 IIFSNHRGHGQSIAKDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y+ ++ I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYKGTNNIAVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 S++ A+ + R ++ +PG DG D+ AV TM KAV + R GP I+E+ +Y Sbjct: 181 MSINNATNTPHLYTRAEAYGVPGFYCEDGNDVMAVYETMGKAVEHVRGGNGPAIVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE++E + DP+ + R L A++ +L I+ V+K +++ Sbjct: 241 RWFGHSTADAGKYRTKEEVDEWKEK-DPMIKYRTYLTSEGIATDDELDAIQAQVKKEVDD 299 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 + EFAQ+ +P+ + + D+ + Sbjct: 300 AYEFAQNSPDPELSVAFEDVWV 321 >gi|134079130|emb|CAK45942.1| unnamed protein product [Aspergillus niger] Length = 403 Score = 335 bits (859), Expect = 8e-90, Method: Composition-based stats. Identities = 148/322 (45%), Positives = 201/322 (62%), Gaps = 8/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K Q Y M LIRR E A +LY + GFCHL GQEAV VG++ ++ D++ Sbjct: 67 ETTKSQLKQLYYDMSLIRRMELAADKLYKEQKIRGFCHLSTGQEAVAVGVEHGISPEDKV 126 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG L G I+ EL GR+ GI GKGGS+HMF+ F+GG+GIVG+ V Sbjct: 127 ITAYRAHGFTLMRGGSVKSIIGELLGRRDGICHGKGGSVHMFTK--NFFGGNGIVGSNVP 184 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 LGTGIAFA +Y + K+ V +GDGAANQGQV+E++N+A LW L VI+ ENN+Y MGTS Sbjct: 185 LGTGIAFAQQYDDTKKVTVNLYGDGAANQGQVHEAYNMAKLWELPVIFGCENNKYGMGTS 244 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 V RASA T + KR + IPG++++GMD+ AV A M Y GP++ E TYRY Sbjct: 245 VERASAMTEYYKR--GYYIPGLRINGMDVLAVIAAMKYGKDYVLGGNGPLLYEFQTYRYA 302 Query: 286 GHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHS+SDP YR+R+E+ R+N DPI R++++ SE D+K ++ +R ++ Sbjct: 303 GHSVSDPGTAYRSRDEVQAERAN-DPITTYREKMIEWGVLSEDDVKTMDKEIRSKVDREA 361 Query: 345 EFAQSDKEPDPAE--LYSDILI 364 + A+ EP L+ DI + Sbjct: 362 QEAEKMAEPPLNSDVLFEDIYV 383 >gi|159130919|gb|EDP56032.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Aspergillus fumigatus A1163] Length = 370 Score = 334 bits (858), Expect = 8e-90, Method: Composition-based stats. Identities = 151/322 (46%), Positives = 211/322 (65%), Gaps = 7/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K++ Y M++ RR E A +LY + GFCHL +GQEAV G++ ++T D++ Sbjct: 34 EVTKKELKQMYYDMVVTRRMEMAADRLYKEKKIRGFCHLSVGQEAVATGIEHAITRDDKV 93 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG+ L G I+ EL GR+ GI+ GKGGSMHMF+ FYGG+GIVGAQV Sbjct: 94 ITAYRCHGYALMRGGTVRSIIGELLGRREGIAYGKGGSMHMFAP--NFYGGNGIVGAQVP 151 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+AFA +Y +V +GDGA+NQGQV+E+FN+A LWNL I+ ENN+Y MGTS Sbjct: 152 VGAGLAFAQQYNGEKATSIVLYGDGASNQGQVFEAFNMAKLWNLPAIFGCENNKYGMGTS 211 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +R+SA T++ KRG IPG++V+GMD+ A KA + A Y A GP++ E +TYRY Sbjct: 212 AARSSALTDYYKRGQY--IPGIKVNGMDVLATKAAVQYAREYTIAGNGPLVFEYVTYRYG 269 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YR+REEI MRS +DPI +++++L K +E +LK ++ + R ++ V Sbjct: 270 GHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKILDWKVMTEEELKALDKSARSHVDEEV 329 Query: 345 EFAQSDKEPD--PAELYSDILI 364 A+ P+ P L+ DI + Sbjct: 330 AIAEQMPAPENNPRILFEDIYV 351 >gi|330752049|emb|CBL80560.1| pyruvate dehydrogenase E1 component subunit alpha [uncultured Flavobacteria bacterium] gi|330752170|emb|CBL87129.1| pyruvate dehydrogenase E1 component alpha subunit [uncultured Flavobacteria bacterium] Length = 331 Score = 334 bits (858), Expect = 9e-90, Method: Composition-based stats. Identities = 136/317 (42%), Positives = 199/317 (62%), Gaps = 1/317 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 K L Y ML R+FE+ + LY + GF HL GQEA++ G ++ +GD+MI Sbjct: 6 ITKVTYLKWYEDMLFWRKFEDMSAALYIQQKIRGFLHLYNGQEAILAGSAFAMEKGDKMI 65 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR H +A G D +IMAEL G+ G S+GKGGSMHMFS K+GF+GGHGIVG Q+ L Sbjct: 66 TAYRNHVQPMALGEDPRRIMAELMGKVTGTSRGKGGSMHMFSPKHGFWGGHGIVGGQIPL 125 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AFA+KY + + + GDGA QG +E+ N+A LW + V++++ENN YAMGTSV Sbjct: 126 GAGLAFADKYNGKNNVTLTYMGDGAIRQGAWHEAANLAMLWKIPVVFIVENNGYAMGTSV 185 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R + T+ K G +++P VDGMD AV + +A+ R +GP ++E+ TYRY+G Sbjct: 186 ERTANHTSIHKLGEGYDMPNRAVDGMDPIAVYDAVHEAMERARGGEGPTLLEIRTYRYKG 245 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDP YR+++E+ E ++ DPI ++ WA++ ++ I V+ ++ V+F Sbjct: 246 HSMSDPQKYRSKQEVAEYQAK-DPITLCLNKIKEKNWATQDEIDAINQRVKDLVKECVDF 304 Query: 347 AQSDKEPDPAELYSDIL 363 + PDP+E+Y + Sbjct: 305 GEKSDFPDPSEVYLGVY 321 >gi|161524607|ref|YP_001579619.1| dehydrogenase E1 component [Burkholderia multivorans ATCC 17616] gi|189350637|ref|YP_001946265.1| pyruvate dehydrogenase E1 component subunit alpha [Burkholderia multivorans ATCC 17616] gi|160342036|gb|ABX15122.1| dehydrogenase E1 component [Burkholderia multivorans ATCC 17616] gi|189334659|dbj|BAG43729.1| pyruvate dehydrogenase E1 component alpha subunit [Burkholderia multivorans ATCC 17616] Length = 327 Score = 334 bits (858), Expect = 9e-90, Method: Composition-based stats. Identities = 120/320 (37%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L D Sbjct: 5 TQLSRDTLLEAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLGVADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGKKTGVCHGKGGSMHIADLSMGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K +++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKQKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 185 SSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVKFSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + +L+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFEARVVRAEVLTTDELRAVDAQVKALIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AEAKAAPLPDAADLLTDVYV 324 >gi|70991192|ref|XP_750445.1| pyruvate dehydrogenase E1 component alpha subunit [Aspergillus fumigatus Af293] gi|66848077|gb|EAL88407.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Aspergillus fumigatus Af293] Length = 370 Score = 334 bits (858), Expect = 9e-90, Method: Composition-based stats. Identities = 151/322 (46%), Positives = 211/322 (65%), Gaps = 7/322 (2%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 E K++ Y M++ RR E A +LY + GFCHL +GQEAV G++ ++T D++ Sbjct: 34 EVTKKELKQMYYDMVVTRRMEMAADRLYKEKKIRGFCHLSVGQEAVSTGIEHAITRDDKV 93 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 ITAYR HG+ L G I+ EL GR+ GI+ GKGGSMHMF+ FYGG+GIVGAQV Sbjct: 94 ITAYRCHGYALMRGGTVRSIIGELLGRREGIAYGKGGSMHMFAP--NFYGGNGIVGAQVP 151 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 +G G+AFA +Y +V +GDGA+NQGQV+E+FN+A LWNL I+ ENN+Y MGTS Sbjct: 152 VGAGLAFAQQYNGEKATSIVLYGDGASNQGQVFEAFNMAKLWNLPAIFGCENNKYGMGTS 211 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +R+SA T++ KRG IPG++V+GMD+ A KA + A Y A GP++ E +TYRY Sbjct: 212 AARSSALTDYYKRGQY--IPGIKVNGMDVLATKAAVQYAREYTIAGNGPLVFEYVTYRYG 269 Query: 286 GHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GHSMSDP YR+REEI MRS +DPI +++++L K +E +LK ++ + R ++ V Sbjct: 270 GHSMSDPGTTYRSREEIQRMRSTNDPIAGLKQKILDWKVMTEEELKALDKSARSHVDEEV 329 Query: 345 EFAQSDKEPD--PAELYSDILI 364 A+ P+ P L+ DI + Sbjct: 330 AIAEQMPAPENNPRILFEDIYV 351 >gi|116627820|ref|YP_820439.1| acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus thermophilus LMD-9] gi|116101097|gb|ABJ66243.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Streptococcus thermophilus LMD-9] gi|312278381|gb|ADQ63038.1| Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit [Streptococcus thermophilus ND03] Length = 323 Score = 334 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 121/322 (37%), Positives = 186/322 (57%), Gaps = 1/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + +KE L + M IR F+ + +L G V G H +G+EA VG L+ D Sbjct: 1 MVKLSKETHLEMFTKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVQHLSYDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 61 IFFSNHRGHGQSIAQDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y+ + I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYKETGNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + RA+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ +Y Sbjct: 181 MDIRRATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYDTMGKAVDHVRGGNGPAIVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE++E ++N+DPI + R L+ AS +L I+ V+ ++ Sbjct: 241 RWFGHSTADAGVYRTKEEVDEWKNNNDPIIRYRDYLVSENIASVEELDAIQSQVKAQVDA 300 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 + EFAQ+ +P+ + + D+ + Sbjct: 301 AYEFAQNSPDPELSVAFEDVWV 322 >gi|289740627|gb|ADD19061.1| pyruvate dehydrogenase E1 alpha subunit [Glossina morsitans morsitans] Length = 403 Score = 334 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 161/344 (46%), Positives = 216/344 (62%), Gaps = 12/344 (3%) Query: 27 ATSSVDCVDIPFL-----EGFEVS-EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 AT + + PF +G E S + KE+ L Y M +IRR E AG LY ++ G Sbjct: 38 ATEATIQIQRPFKLHRLDQGPETSVKLTKEEALLYYTQMQVIRRIETSAGNLYKEKIIRG 97 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL GQEA VGMK ++T+ D +I+AYR HG GV ++AELTGRQ G S+GK Sbjct: 98 FCHLYSGQEACAVGMKSAMTDVDNIISAYRVHGWTYLMGVPPLGVLAELTGRQKGSSRGK 157 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+ FYGG+GIVGAQV LG G+A A +Y+ + +C +GDGA+NQGQV+E+ Sbjct: 158 GGSMHMYGR--NFYGGNGIVGAQVPLGAGVALACQYKGNGGMCYALYGDGASNQGQVFEA 215 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 +N+A LW L VI+V ENN Y MGTS R+S T++ RG IPG+ VDGMD+ AV++ Sbjct: 216 YNMAYLWRLPVIFVCENNNYGMGTSAERSSCNTDYYTRGDV--IPGIWVDGMDVLAVRSA 273 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 A Y KGPI++E TYRY GHSMSDP YRTREEI E+RS DPI ++ + Sbjct: 274 SLFAREYA-TKKGPIVLETNTYRYSGHSMSDPGTSYRTREEIQEVRSKRDPISSFKELCI 332 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 + S ++K I+ VRK ++ + A++D E L++D+ Sbjct: 333 EHGLISADEVKVIDNKVRKEVDEATAQAKADTELPLQGLWTDVY 376 >gi|322709387|gb|EFZ00963.1| pyruvate dehydrogenase E1 component alpha subunit [Metarhizium anisopliae ARSEF 23] Length = 409 Score = 334 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 167/371 (45%), Positives = 232/371 (62%), Gaps = 14/371 (3%) Query: 2 YVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSA 55 + + VT +L+ SV V D F E +E+ E K++ Sbjct: 24 ALVSRSVTTDAASASLHNSVPQSEDEPFQVALSDESF-ETYELDPPSYTIEVTKKELKQM 82 Query: 56 YRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHI 115 Y M+ IR+ E A +LY + GFCHL GQEAV VG++ ++T+ D +ITAYR HG Sbjct: 83 YYDMVTIRQMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAITKLDDVITAYRCHGFA 142 Query: 116 LACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANK 175 L G I+ EL GR+ GI+ GKGGSMHMFS GFYGG+GIVGAQV +G G+AFA+K Sbjct: 143 LMRGGTVRSIIGELLGRREGIAYGKGGSMHMFSK--GFYGGNGIVGAQVPVGAGLAFAHK 200 Query: 176 YRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNF 235 Y S ++ +GDGA+NQGQV+E+FN+A LWNL ++ ENN+Y MGTS +R+SA T++ Sbjct: 201 YNDSKTASIILYGDGASNQGQVFEAFNMAKLWNLPALFGCENNKYGMGTSAARSSALTDY 260 Query: 236 SKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-AN 294 KRG IPG++V+GMD+ AVKA + + A KGP+++E +TYRY GHSMSDP Sbjct: 261 YKRGQY--IPGLKVNGMDVLAVKAAVTYGKEWTAADKGPMVLEYVTYRYGGHSMSDPGTT 318 Query: 295 YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSD--KE 352 YRTREEI MRS +DPI +++++L + +E +LK+I+ R +N V A++ E Sbjct: 319 YRTREEIQRMRSTNDPIAGLKQKILDWEVTTEDELKKIDKEARSHVNEEVAIAEAMAVPE 378 Query: 353 PDPAELYSDIL 363 P P+ L+ DI Sbjct: 379 PKPSILFEDIY 389 >gi|302837967|ref|XP_002950542.1| hypothetical protein VOLCADRAFT_104783 [Volvox carteri f. nagariensis] gi|300264091|gb|EFJ48288.1| hypothetical protein VOLCADRAFT_104783 [Volvox carteri f. nagariensis] Length = 431 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 131/330 (39%), Positives = 197/330 (59%), Gaps = 14/330 (4%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 E Y M+L R FEE Q+Y G + GF HL GQEAV G+ L D ++ Sbjct: 66 VTPEVAKDLYYDMVLGREFEEMCAQMYYRGKMFGFVHLYSGQEAVSSGVIRLLRPDDHVV 125 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 + YR+H H L+ GV A ++MAEL G++ G +G+GGSMHMFS+K+ GG+ +G + + Sbjct: 126 STYRDHVHALSKGVSAREVMAELFGKKTGCCRGQGGSMHMFSSKHNVLGGYAFIGEGIPV 185 Query: 167 GTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQ 219 G G AF +KYRR D + FGDG N GQ YES N+AAL+ L I+V+ENN Sbjct: 186 GLGAAFQSKYRRDVLGDESADSVTCSFFGDGTCNVGQFYESLNMAALYKLPHIFVVENNL 245 Query: 220 YAMGTSVSRASAQT------NFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 +A+G S RA+++T K+G +F +PG+ VDGMD+ V+ +AV R +G Sbjct: 246 WAIGMSHLRATSRTSGDEHPYIYKKGPAFGMPGVLVDGMDVLKVRQVAQEAVERARRGEG 305 Query: 274 PIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIE 333 P +IE TYR+RGHS++DP R+++E + + DPI Q++K +L + A+E D+K +E Sbjct: 306 PTLIEAETYRFRGHSLADPDELRSKDEKAKYLA-RDPIPQLKKYMLEHGLATEADIKALE 364 Query: 334 MNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 V +++ + V+FA +P+ +L ++ Sbjct: 365 DKVAEVVEDCVKFADESPKPERGQLLENVF 394 >gi|221198109|ref|ZP_03571155.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Burkholderia multivorans CGD2M] gi|221208400|ref|ZP_03581403.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Burkholderia multivorans CGD2] gi|221171813|gb|EEE04257.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Burkholderia multivorans CGD2] gi|221182041|gb|EEE14442.1| acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [Burkholderia multivorans CGD2M] Length = 327 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 120/320 (37%), Positives = 184/320 (57%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +++ L AYRLM IR FEE+ + G + GF HL G+EA VG + L D Sbjct: 5 TQLSRDTLLEAYRLMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMLHLGVADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGKKTGVCHGKGGSMHIADLSMGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K +++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKQKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S S + A N + R F +PG+ VDG D AV + +AV R GP ++E+ RY Sbjct: 185 SSSWSVATDNIADRANGFGMPGVIVDGFDFFAVHEALGEAVERARNGGGPTLVEVKFSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D ++ R++ + + +L+ ++ V+ +I+++V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKHFESRVVRAEVLTTDELRAVDAQVKALIDDAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ PD A+L +D+ + Sbjct: 305 AEAKAAPLPDAADLLTDVYV 324 >gi|302510667|ref|XP_003017285.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Arthroderma benhamiae CBS 112371] gi|291180856|gb|EFE36640.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Arthroderma benhamiae CBS 112371] Length = 442 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 160/392 (40%), Positives = 226/392 (57%), Gaps = 36/392 (9%) Query: 5 KQDVTVGDIKMALNPSVSAKRAAT----SSVDCVDIPFL-----EGFEVSEF-------- 47 +D+ V I + A R + + + D PF E FE E Sbjct: 36 AEDIPVVRIPGLPIERIHAGRKSANYSFAGLQEDDKPFSVKLSDESFETYELDPPPYTLK 95 Query: 48 -NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 K++ Y M+ IRR E A +LY + GFCHL GQEAV G++ ++T D++I Sbjct: 96 TTKKELKQMYYDMVSIRRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAITPDDKLI 155 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR HG + G I+ EL GR+ GI+ GKGGSMHMF F+GG+GIVGAQV + Sbjct: 156 TAYRCHGFAMMRGGTVRSIIGELLGRREGIAYGKGGSMHMF--AKNFFGGNGIVGAQVPV 213 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE---------- 216 G G+AFA +Y + +GDGA+NQGQV+E+FN+A LWNL VI+ E Sbjct: 214 GAGLAFAQQYNGEANTTICLYGDGASNQGQVFEAFNMAKLWNLPVIFGCESTFQIVFYPF 273 Query: 217 -NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPI 275 +N+Y MGT+ +R+SA T++ KRG IPG++++GMD+ A+KA + Y + +GP+ Sbjct: 274 LDNKYGMGTAANRSSALTDYYKRGQY--IPGIKINGMDVLAIKAAVQYGREYTVSGQGPL 331 Query: 276 IIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEM 334 + E +TYRY GHSMSDP YRTREEI MRS +DPI ++++LL SE +LK I+ Sbjct: 332 VFEYVTYRYGGHSMSDPGTTYRTREEIQRMRSTNDPIAGLKQKLLDWNITSEEELKAIDK 391 Query: 335 NVRKIINNSVEFAQSDKEPD--PAELYSDILI 364 + R +++ V A+ PD P L+ DI + Sbjct: 392 DARSMVDEEVAIAEKMPVPDATPRILFEDIYV 423 >gi|73539372|ref|YP_299739.1| pyruvate dehydrogenase (lipoamide) [Ralstonia eutropha JMP134] gi|72122709|gb|AAZ64895.1| Pyruvate dehydrogenase (lipoamide) [Ralstonia eutropha JMP134] Length = 334 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 120/319 (37%), Positives = 179/319 (56%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +KE L+ YR M IR FEE+ +G G + GF HL G+EA VG+ L +GD++ Sbjct: 14 PLDKETLLTVYRKMRTIREFEERLHVDFGRGDIPGFVHLYAGEEAAGVGILHHLHDGDRI 73 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GVD +M E+ G++GG GKGGSMH+ G G +GI+GA Sbjct: 74 ASTHRGHGHCIAKGVDPVAMMKEIYGKKGGSCNGKGGSMHIADLSKGMMGANGILGAGAP 133 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A A K+R ++ + GDGA+NQG ES N+AA+WNL VI+VIENN YA TS Sbjct: 134 LICGAALAAKFRGKGEVGITFSGDGASNQGTFLESLNLAAVWNLPVIFVIENNGYAESTS 193 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +A ++ R F IPG+ VDG D AV + + R GP ++E R+ Sbjct: 194 RDYGTAVDSYVDRAAGFGIPGVTVDGTDFFAVHEAAGEVIRRAREGGGPSLLECKMVRFY 253 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR E++++R+N D ++ + + S +L+ I+ V +I ++V+ Sbjct: 254 GHFEGDAQTYRAAGELDDIRANKDCLKLFSRAVTQAGVVSREELESIDREVATLIEHAVQ 313 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ P P +L +D+ + Sbjct: 314 EAKAAPLPGPEDLLTDVYV 332 >gi|226494977|ref|NP_001150259.1| pyruvate dehydrogenase E1 component alpha subunit [Zea mays] gi|195637880|gb|ACG38408.1| pyruvate dehydrogenase E1 component alpha subunit [Zea mays] Length = 390 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 160/363 (44%), Positives = 225/363 (61%), Gaps = 14/363 (3%) Query: 2 YVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLL 61 ++A + V+ + + SV VD P + + ++ +R M L Sbjct: 20 FMAARPVSDSTAALTIETSVPFTSH------LVDPPSRD----VTTTPAELVTFFRDMSL 69 Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 +RR E A LY ++ GFCHL GQEAV VGM+ ++T D +ITAYR+H LA G D Sbjct: 70 MRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDHCTYLARGGD 129 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 +EL GR+GG S+GKGGSMH + FYGGHGIVGAQV LG G+AFA KY++ + Sbjct: 130 LVSAFSELMGREGGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQKYKKEET 189 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 +GDGAANQGQ++E+ NI+ALW L I V ENN Y MGT+ RA+ + KRG Sbjct: 190 ATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDY 249 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREE 300 +PG++VDGMD+ AVK A + A+ GPI++EM TYRY GHSMSDP + YRTR+E Sbjct: 250 --VPGLKVDGMDVLAVKQACKFAKDHAVAN-GPIVLEMDTYRYHGHSMSDPGSTYRTRDE 306 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 I+ +R DPIE+VRK LL + A+ +LK++E +RK +++++ A+ PD +EL++ Sbjct: 307 ISGVRQERDPIERVRKLLLAHDLATAAELKDMEKEIRKQVDDAIAKAKESSMPDTSELFT 366 Query: 361 DIL 363 ++ Sbjct: 367 NVY 369 >gi|310826716|ref|YP_003959073.1| hypothetical protein ELI_1122 [Eubacterium limosum KIST612] gi|308738450|gb|ADO36110.1| hypothetical protein ELI_1122 [Eubacterium limosum KIST612] Length = 320 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 121/320 (37%), Positives = 177/320 (55%), Gaps = 1/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + EF+KE Y M R FEEK L+ G V G HL +GQE VG ++L EGD Sbjct: 1 MMEFDKELLTKMYYRMNQARFFEEKVAWLFSRGQVHGTTHLSMGQEGSAVGACLALDEGD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +R H + G+D +MAE G++ G KGKGGSMH+ K+G G +G+VG Sbjct: 61 LVSLTHRGHSQAIGFGLDVKLMMAEFLGKETGYCKGKGGSMHIADLKSGNIGANGVVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 L G A KY+++ K+ + GDG+ N+G +ES N+A++W L VI+ +ENN Y M Sbjct: 121 YPLSCGAALTQKYKKTGKVVLCFAGDGSTNEGNFHESLNLASVWKLPVIFYVENNLYGMS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 T + + N S R ++ IPG+ +DG DI V + KA Y + KGP++IE TYR Sbjct: 181 TPIEKHMNIENISDRAAAYGIPGLTIDGNDIIEVYKIVRKARQYAHSGKGPVLIESKTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 Y GHS SD YR++EE+ R DPI + + L +K + +I+ + I ++ Sbjct: 241 YNGHSKSDAQVYRSKEEVEAWRQK-DPITRFERYLEEDKVMLPDQMVQIKEAAYQSIEDA 299 Query: 344 VEFAQSDKEPDPAELYSDIL 363 VEFA++ EP + D+ Sbjct: 300 VEFAKNSPEPPVTAVLEDVY 319 >gi|22298712|ref|NP_681959.1| pyruvate dehydrogenase E1 component, alpha subunit [Thermosynechococcus elongatus BP-1] gi|22294893|dbj|BAC08721.1| pyruvate dehydrogenase E1 component, alpha subunit [Thermosynechococcus elongatus BP-1] Length = 342 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 140/340 (41%), Positives = 206/340 (60%), Gaps = 9/340 (2%) Query: 31 VDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEA 90 V +P L + + +EQ L Y M+L R FE+K ++Y G + GF HL GQEA Sbjct: 2 VQERSLPSLSIPQTA-ITREQGLMLYEDMVLGRTFEDKCAEMYYRGRMFGFVHLYNGQEA 60 Query: 91 VIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTK 150 V G+ ++ D + + YR+H H L+ G+ A ++MAEL G+ G SKG+GGSMH+FS K Sbjct: 61 VSTGVIKAMRPDDYVCSTYRDHVHALSAGIPAREVMAELFGKATGCSKGRGGSMHLFSAK 120 Query: 151 NGFYGGHGIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNI 203 + F GG V + + TG AF YRR D++ FGDGA+N GQ +E N+ Sbjct: 121 HNFLGGFAFVAEGIPVATGAAFQTLYRRQVMGDAKADQVTACFFGDGASNNGQFFECLNM 180 Query: 204 AALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDK 263 AALW L +++V+ENN++A+G + RAS++T K+ F + G +VDGMD+ AV+ + Sbjct: 181 AALWKLPILFVVENNKWAIGMAHERASSETEIYKKAKVFGMVGEEVDGMDVLAVRTVAEA 240 Query: 264 AVAYCRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKW 323 A+A RA +GP +IE LTYR+RGHS++DP R++EE E DPI+++ L+ + Sbjct: 241 AIARARAGEGPTLIEALTYRFRGHSLADPDELRSKEE-KEFWLKRDPIKKLGAYLVEQEL 299 Query: 324 ASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 A+ DL+ IE V+ I+ ++V FA+ EP P ELY I Sbjct: 300 ATGEDLRAIEQKVQAIVEDAVTFAEQSPEPKPEELYDYIF 339 >gi|290561755|gb|ADD38275.1| Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [Lepeophtheirus salmonis] Length = 386 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 166/350 (47%), Positives = 219/350 (62%), Gaps = 12/350 (3%) Query: 22 SAKRAATSSVDCVDIPFLEGFEVSE-------FNKEQELSAYRLMLLIRRFEEKAGQLYG 74 + A T+ VDI +SE +E+ L+ Y M +RR E AG LY Sbjct: 13 PVRFAHTAESVTVDIRPYRLHRLSEGPPEQSVLTREEGLNYYESMFTVRRLENAAGNLYK 72 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 V GFCHL GQEA+ +GMK +L D +IT+YR HG GV +++AELTG++ Sbjct: 73 EKAVRGFCHLSSGQEAISIGMKAALRPVDAIITSYRAHGFAYMMGVSVLEVLAELTGKKS 132 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ +GKGGSMHM+ FYGG+GIVGAQV LG GIAFA KY+ + +GDGAA Q Sbjct: 133 GVVRGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIAFAQKYKEDGGVTYALYGDGAAQQ 190 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 GQVYE++N+A LW+L VI+V ENN Y MGTS RA+A T+F RG IPG+ VDGMD+ Sbjct: 191 GQVYEAYNMAKLWDLPVIFVCENNHYGMGTSQDRAAASTDFYTRGDY--IPGVLVDGMDV 248 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQ 313 AV+ AV YC + KGP++ E+ TYRY GHSMSDP YRTREE+ E+R DPI Sbjct: 249 IAVREACKFAVDYCGSGKGPLVFEIATYRYHGHSMSDPGTSYRTREEVQEIRQTQDPITG 308 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +R +++ + +LK IE +RK I+ V+ A++D E D +ELY D+ Sbjct: 309 LRDKMIDSGLVVPEELKAIEQKIRKNIDGIVKLAKTDPEIDFSELYYDVY 358 >gi|222635308|gb|EEE65440.1| hypothetical protein OsJ_20802 [Oryza sativa Japonica Group] Length = 612 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 161/356 (45%), Positives = 222/356 (62%), Gaps = 5/356 (1%) Query: 10 VGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKA 69 ++ +A S +I EV+ +E + +R M +RR E A Sbjct: 101 TTSVRGVSEFDRAAYHRGPRSPTSPNIWDPAPREVATTARELA-TFFRDMSAMRRAEIAA 159 Query: 70 GQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAEL 129 LY ++ GFCHL GQEAV VGM+ + T D +ITAYR+H LA G D + + AEL Sbjct: 160 DSLYKAKLIRGFCHLYDGQEAVAVGMEAATTRADAIITAYRDHCAYLARGGDLAALFAEL 219 Query: 130 TGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGD 189 GR+GG S+GKGGSMH++ FYGGHGIVGAQV LG G+AFA +YR+ + +GD Sbjct: 220 MGRRGGCSRGKGGSMHLYKKDANFYGGHGIVGAQVPLGCGLAFAQRYRKEAAVTFDLYGD 279 Query: 190 GAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQV 249 GAANQGQ++E+ N+AALW L V+ V ENN Y MGT+ RAS + KRG +PG++V Sbjct: 280 GAANQGQLFEALNMAALWKLPVVLVCENNHYGMGTAEWRASKSPAYYKRGDY--VPGLKV 337 Query: 250 DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNH 308 DGMD+ AVK A + GPII+EM TYRY GHSMSDP + YRTR+EI +R Sbjct: 338 DGMDVLAVKQACKFAKQHA-LENGPIILEMDTYRYHGHSMSDPGSTYRTRDEIAGIRQER 396 Query: 309 DPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 DPIE+VRK LL + +A+ +LK++E +RK ++ ++ A+ PDP+EL++++ + Sbjct: 397 DPIERVRKLLLAHDFATTQELKDMEKEIRKQVDTAIAKAKESPMPDPSELFTNVYV 452 >gi|159903876|ref|YP_001551220.1| pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. MIT 9211] gi|159889052|gb|ABX09266.1| Pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. MIT 9211] Length = 360 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 127/336 (37%), Positives = 207/336 (61%), Gaps = 9/336 (2%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 + L G E + +++ L ++ M L RRFE+K ++Y G + GF HL GQEAV G+ Sbjct: 24 LSSLSGGESAVIDRDTGLRLFKDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSSGV 83 Query: 96 KMSLT-EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 ++ + D + YR+H H L+ GV A ++M+EL G++ G SKG+GGSMH+FS ++ Sbjct: 84 IGAMKLKHDWFCSTYRDHVHALSAGVPAREVMSELFGKETGCSKGRGGSMHLFSKEHHLL 143 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALW 207 GG+ +G + + G AF+++Y++ D + FGDG N GQ +E N+A LW Sbjct: 144 GGYAFIGEGIPVALGAAFSSRYKKEVFKDKNSDAVTAAFFGDGTCNNGQFFECLNMAQLW 203 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 L +I+V+ENN++A+G + RA++ ++ +F + G +VDGMD+ AV+ ++A+ Sbjct: 204 KLPIIFVVENNKWAIGMAHDRATSDPEIWRKAGAFGMEGEEVDGMDVLAVRGAAERALER 263 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 RA +GP +IE LTYR+RGHS++DP R+ +E E + DP++ + K L+ + A+E Sbjct: 264 ARAGEGPSLIECLTYRFRGHSLADPDELRSEQE-KEFWAQRDPLKNLAKVLVSKELANEN 322 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +LK IE + + ++VEFA + K+PDP+EL I Sbjct: 323 ELKNIEKEIDSEVTDAVEFALAAKDPDPSELTKYIW 358 >gi|318042115|ref|ZP_07974071.1| pyruvate dehydrogenase E1 alpha subunit [Synechococcus sp. CB0101] Length = 369 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 126/325 (38%), Positives = 196/325 (60%), Gaps = 9/325 (2%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQM 105 ++++ L YR M L RRFE+K ++Y G + GF HL GQEAV G+ ++ + D Sbjct: 43 VSRDEGLMLYRDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGVIKAMKMQHDWF 102 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + YR+H H L+CGV A ++M+EL G++ G SKG+GGSMH+FS ++ GG+ +G + Sbjct: 103 CSTYRDHVHALSCGVPAREVMSELFGKETGCSKGRGGSMHLFSKEHHLLGGYAFIGEGIP 162 Query: 166 LGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENN 218 + G AF ++Y+R D + FGDG N GQ YE N+AALW L +++V+ENN Sbjct: 163 VALGAAFTSRYKRDALGDASSDAVTAAFFGDGTCNIGQFYECLNMAALWKLPILFVVENN 222 Query: 219 QYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIE 278 ++A+G +RA++ ++ +F + G +VDGMD+ AV+ +A+ RA +GP ++E Sbjct: 223 KWAIGMDHNRATSDPEIWRKAAAFGMAGEEVDGMDVLAVRGAAQRAIERARAGEGPTLLE 282 Query: 279 MLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRK 338 LTYR+RGHS++DP R E E + DPI+++ L+ + A+ +LK IE + Sbjct: 283 CLTYRFRGHSLADPDELRAEAE-KEFWAQRDPIKRLAAHLIEHNLATADELKGIEKEIDA 341 Query: 339 IINNSVEFAQSDKEPDPAELYSDIL 363 + + VEFA + EP P EL I Sbjct: 342 EVADCVEFALAAPEPKPEELTRYIW 366 >gi|195638880|gb|ACG38908.1| pyruvate dehydrogenase E1 component alpha subunit [Zea mays] Length = 390 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 160/363 (44%), Positives = 224/363 (61%), Gaps = 14/363 (3%) Query: 2 YVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLL 61 ++A + V+ + + SV VD P + + ++ +R M L Sbjct: 20 FMAARPVSDSTAALTIETSVPFTSH------LVDPPSRD----VTTTPAELVTFFRDMSL 69 Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 +RR E A LY ++ GFCHL GQEAV VGM+ ++T D +ITAYR+H LA G D Sbjct: 70 MRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDHCTYLARGGD 129 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 +EL GR+GG S+GKGGSMH + FYGGHGIVGAQV LG G+AFA KY+ + Sbjct: 130 LVSAFSELMGREGGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQKYKEEET 189 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 +GDGAANQGQ++E+ NI+ALW L I V ENN Y MGT+ RA+ + KRG Sbjct: 190 ATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDY 249 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREE 300 +PG++VDGMD+ AVK A + A+ GPI++EM TYRY GHSMSDP + YRTR+E Sbjct: 250 --VPGLKVDGMDVLAVKQACKFAKDHAVAN-GPIVLEMDTYRYHGHSMSDPGSTYRTRDE 306 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 I+ +R DPIE+VRK LL + A+ +LK++E +RK +++++ A+ PD +EL++ Sbjct: 307 ISGVRQERDPIERVRKLLLAHDLATAAELKDMEKEIRKQVDDAIAKAKESSMPDTSELFT 366 Query: 361 DIL 363 ++ Sbjct: 367 NVY 369 >gi|295681445|ref|YP_003610019.1| pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. CCGE1002] gi|295441340|gb|ADG20508.1| Pyruvate dehydrogenase (acetyl-transferring) [Burkholderia sp. CCGE1002] Length = 327 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 121/320 (37%), Positives = 186/320 (58%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ +KE+ L AYR+M IR FEE+ + G + GF HL G+EA VG M L + D Sbjct: 5 TQLSKEKLLEAYRMMRTIREFEERLHVEFATGEIPGFVHLYAGEEASAVGTMMHLNDADY 64 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 + T +R HGH +A GVD +MAE+ GR G+ +GKGGSMH+ G G +GIVGA Sbjct: 65 VATTHRGHGHCIAKGVDVRGMMAEIYGRSTGVCRGKGGSMHIADLSKGMLGANGIVGAGG 124 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 L G A A K +++ + V FGDGA+NQG ++ES N+A++W L I+V ENN YA T Sbjct: 125 PLVCGAALAAKLKKTGGVGVCFFGDGASNQGVIFESMNLASVWRLPAIFVAENNGYAEAT 184 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S + + A N + R F +PG+ VDG D AV + A+ R GP ++E+ RY Sbjct: 185 SSTWSVAADNIADRASGFGMPGVIVDGFDFFAVHEALGAAIERARGGGGPTLVEVKLSRY 244 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 GH D YR E+ ++R D +++ +R++ + S +L+ ++ V+++I+ +V Sbjct: 245 FGHFEGDAQTYRAPGEVQKLRDEKDCLKRFEERVVRAEMLSADELRGVDAEVKQLIDGAV 304 Query: 345 EFAQSDKEPDPAELYSDILI 364 A++ P A+L +D+ + Sbjct: 305 TEAKAAPLPTAADLLTDVYV 324 >gi|51209964|ref|YP_063628.1| pyruvate dehydrogenase E1 component alpha subunit [Gracilaria tenuistipitata var. liui] gi|50657718|gb|AAT79703.1| pyruvate dehydrogenase E1 component alpha subunit [Gracilaria tenuistipitata var. liui] Length = 341 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 125/321 (38%), Positives = 193/321 (60%), Gaps = 12/321 (3%) Query: 52 ELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYRE 111 L Y+ MLL R FE+ Q+Y G + GF HL GQEAV G+ L + D + + YR+ Sbjct: 22 VLHLYKDMLLGRCFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGVIKVLQKDDYVCSTYRD 81 Query: 112 HGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIA 171 H H L+ GV A+ IMAEL G++ G S+G+GGSMH+FS + F GG +G + + G A Sbjct: 82 HVHALSKGVPANLIMAELFGKETGCSRGRGGSMHIFSAAHNFLGGFAFIGEGIPISIGAA 141 Query: 172 FANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 F + YR+ ++ FGDG +N GQ +E N+A LW L +I+V+ENNQ+A+G Sbjct: 142 FQSVYRKQILNDLQPMRVTACFFGDGTSNNGQFFECLNMAVLWKLPIIFVVENNQWAIGM 201 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 + +R+++ K+ +F +PG++VDGMD+ A++ AV R GP +IE LTYR+ Sbjct: 202 AHNRSTSFPEIHKKAEAFGLPGIEVDGMDVLAIREVAISAVDRARFGHGPTLIEALTYRF 261 Query: 285 RGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSV 344 RGHS++DP R+ E + DPI++++ + N SE +++++ + V+ I+ +V Sbjct: 262 RGHSLADPDELRSVSEKEAWLA-RDPIKRLKNYISDNSLCSEKEVEDVNLAVKIEIDQAV 320 Query: 345 EFAQSDKEPDPAE----LYSD 361 EFA S EP+ + L+SD Sbjct: 321 EFAISSPEPNIKDLKKYLFSD 341 >gi|324517093|gb|ADY46725.1| Pyruvate dehydrogenase E1 component subunit alpha type II [Ascaris suum] Length = 384 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 153/360 (42%), Positives = 214/360 (59%), Gaps = 9/360 (2%) Query: 9 TVGDIKMALNPSVSAKRAATSSV--DCVDIPFLEGFEVSEFN--KEQELSAYRLMLLIRR 64 V L P +S + A+++ V + +E +E ++ L+ Y M IRR Sbjct: 15 RVTATCRFLPPLISHRFASSARVQVKPYKLHNVESGPNAEVTVTRDDALNIYTRMQTIRR 74 Query: 65 FEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASK 124 E AG LY + GFCHL G+EA VG+K ++ D +IT+YR HG CG Sbjct: 75 LEAAAGNLYKEQKIRGFCHLYAGEEACAVGIKSAMEPNDAIITSYRCHGWTYLCGPSVVP 134 Query: 125 IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 ++ ELTGR G GKGGSMHM+ + FYGG+GIVGAQ LGTG+AFA K R+ +C Sbjct: 135 VLCELTGRMNGNVHGKGGSMHMYG--DNFYGGNGIVGAQQPLGTGVAFAMKCRKMKNVCF 192 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 FGDGAANQGQ++ES NIA LWN+ V+YV ENN Y GTS RA A ++ R + Sbjct: 193 TLFGDGAANQGQLFESMNIAKLWNIPVVYVCENNGYGFGTSTKRACAAKHYYDRVSY--M 250 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINE 303 PG+ VDGMD+ AV+ A +C A KGP+++EM TYRY GHS++DP YRTREE+ E Sbjct: 251 PGVWVDGMDVLAVREAARWAKEWCNAGKGPLMLEMSTYRYGGHSVADPGTSYRTREEVEE 310 Query: 304 MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +R D I +++++ +E +LKEI+ +RK ++ + + A++ KE L +D+ Sbjct: 311 VRRTRDAINGFKEKVIPTGLLTEDELKEIDKKIRKEVDEAAKMARTGKEATTDLLLTDLY 370 >gi|255948700|ref|XP_002565117.1| Pc22g11710 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592134|emb|CAP98459.1| Pc22g11710 [Penicillium chrysogenum Wisconsin 54-1255] Length = 405 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 160/371 (43%), Positives = 224/371 (60%), Gaps = 14/371 (3%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAY 56 +A++ VT + V + +V D F E +E+ E +K++ Y Sbjct: 21 LARRTVTTDAASANVESPVPQEDDKPFTVRLSDESF-ETYELDPPSYTLETSKKELKQMY 79 Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 M+ +RR E A +LY + GFCHL GQEAV VG++ ++T D++ITAYR HG + Sbjct: 80 YDMVAMRRMEMAADRLYKEKKIRGFCHLSTGQEAVAVGIEHAITRMDKVITAYRCHGFAM 139 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G I+ EL GR+ GI+ GKGGSMHMF FYGG+GIVGAQV +G G+AFA +Y Sbjct: 140 MRGGTVKSIIGELLGRREGIAYGKGGSMHMF--AENFYGGNGIVGAQVPVGAGLAFAQQY 197 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 +V +GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGTS SR+SA T + Sbjct: 198 NEQPNTSIVLYGDGASNQGQVFEAFNMAKLWNLPVLFGCENNKYGMGTSASRSSALTEYY 257 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANY 295 KRG IPG++V+GMD+ A KA + + Y GP+++E +TYRY GHSMSDP Y Sbjct: 258 KRGQY--IPGLKVNGMDVLATKAAVQYSKNYAITGNGPLVLEYVTYRYGGHSMSDPGTTY 315 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R+REEI MRS HDPI +++++L SE +LK ++ R ++ V A+ PD Sbjct: 316 RSREEIQRMRSTHDPIAGLKQKMLEWGVTSEEELKGLDKTARANVDAEVAEAEKMPVPDN 375 Query: 356 AE--LYSDILI 364 L+ DI + Sbjct: 376 TSRILFEDIYV 386 >gi|294055706|ref|YP_003549364.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coraliomargarita akajimensis DSM 45221] gi|293615039|gb|ADE55194.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Coraliomargarita akajimensis DSM 45221] Length = 368 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 133/321 (41%), Positives = 200/321 (62%), Gaps = 2/321 (0%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 ++ + E++L Y++++ IRRFEE++ Q Y G +GGF HL IGQEAV G+ + E D Sbjct: 29 AKLSAEEKLDLYKMIVGIRRFEERSLQAYNQGKIGGFLHLYIGQEAVATGIVSLMEENDH 88 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +ITAYR+HGH LA G+ ++ MAE+ G+ G SKGKGGSMH F+ ++GGHGIV Q Sbjct: 89 IITAYRDHGHALAVGMSMNECMAEMYGKYTGCSKGKGGSMHFFAPDKNYWGGHGIVAGQT 148 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 LG G+AF KY+ + GDGA NQG E+ N+A+LW+L V++VIENN Y+MGT Sbjct: 149 PLGAGLAFGLKYKGLKGCALAFLGDGAVNQGSFMETLNLASLWDLPVVFVIENNGYSMGT 208 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 S++R+SA+ N + R F++ +G D+ V+ ++A+ R P ++E+ TYRY Sbjct: 209 SLARSSAEENLAHRADGFDMEWEVCNGHDVFEVREVANRAMTRARETHKPFLLEIRTYRY 268 Query: 285 RGHSMSDPAN--YRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RGHS++D + YRT+EEI E + DPI ++ +LL + +E +KEI + + Sbjct: 269 RGHSVADANHEKYRTKEEIEEYKKTKDPINVLKAQLLADGTLTEELVKEINAEKKAEADA 328 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 S +FA E+ +D+ Sbjct: 329 SAKFADESPVAPREEIQTDVY 349 >gi|156741990|ref|YP_001432119.1| pyruvate dehydrogenase [Roseiflexus castenholzii DSM 13941] gi|156233318|gb|ABU58101.1| Pyruvate dehydrogenase (acetyl-transferring) [Roseiflexus castenholzii DSM 13941] Length = 353 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 129/307 (42%), Positives = 186/307 (60%), Gaps = 1/307 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 + ++ YR M+LIRRFEEK ++Y +GGF HL IG+EA VG +L D + Sbjct: 24 LDAATLINYYRQMVLIRRFEEKCQEMYTKARIGGFLHLYIGEEATAVGAISALRPEDHIF 83 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 T YR+HGH +A G+D + +MAEL G+ G SKG GGSMH F+GG+ IVG+ + L Sbjct: 84 THYRDHGHAIARGLDINALMAELFGKVTGCSKGLGGSMHFADASKNFWGGYAIVGSHLPL 143 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G+A K +R D + +V FGDGA N G+ YES N A LW L VI+V ENN YAMGT + Sbjct: 144 AVGVALGMKMQRRDSVVMVFFGDGATNGGEFYESLNFAQLWKLPVIFVCENNLYAMGTPL 203 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 S+ T ++ +F++ +VDG D+ ++ +AV Y R+ +GP+++E +TYR+RG Sbjct: 204 EVHSSVTEIYRKACAFDMKAERVDGNDVLVMRDAALRAVEYARSGRGPVLLEAMTYRFRG 263 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HS D YR++E+I R N DPI + R L+ A+E L++I+ + + +V F Sbjct: 264 HSAQDTQKYRSKEDIERHRRN-DPIARFRAMLVQEGIATEQQLRDIDRMIDDQVEAAVRF 322 Query: 347 AQSDKEP 353 A EP Sbjct: 323 ADESPEP 329 >gi|2558904|gb|AAD03773.1| pyruvate dehydrogenase complex E1-alpha subunit [Kluyveromyces lactis] Length = 408 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 151/361 (41%), Positives = 220/361 (60%), Gaps = 19/361 (5%) Query: 15 MALNPSVSAKRAATSSVDCVDIP--FLEGF--EVSEFN----KEQELSAYRLMLLIRRFE 66 AL+ + + +D+P EG+ +V E + K L Y+ M+++RR E Sbjct: 28 RALSQVADETKPGDDDLVQIDLPETSFEGYLLDVPELSYQTTKSNLLQMYKDMIIVRRME 87 Query: 67 EKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIM 126 LY + GFCH +GQEA+ VG++ ++T+ D +IT+YR HG G ++ Sbjct: 88 MACDALYKAKKIRGFCHSSVGQEAIAVGIENAITKRDTVITSYRCHGFTYMRGAAVQAVL 147 Query: 127 AELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVC 186 AEL GR+ G+S GKGGSMH+++ GFYGG+GIVGAQV LG G+AFA++Y+ D Sbjct: 148 AELMGRRTGVSFGKGGSMHLYAP--GFYGGNGIVGAQVPLGAGLAFAHQYKHEDACSFAL 205 Query: 187 FGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPG 246 +GDGA+NQGQV+ESFN+A LWNL ++ ENN+Y MGT+ +R+SA T + KRG IPG Sbjct: 206 YGDGASNQGQVFESFNMAKLWNLPAVFCCENNKYGMGTAAARSSAMTEYFKRGQY--IPG 263 Query: 247 MQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMR 305 ++V+GMDI + K + + GPI++E TYRY GHSMSDP YRTR+EI MR Sbjct: 264 LKVNGMDIL----AVTKLKDWTVSGNGPIVLEYETYRYGGHSMSDPGTTYRTRDEIQHMR 319 Query: 306 SNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP--AELYSDIL 363 S +DPI ++ LL A+E ++K + RK ++ VE A + P+ + L+ D+ Sbjct: 320 SKNDPIAGLKMHLLELGIATEDEIKAYDKAARKYVDEQVELADAAPAPEAKMSILFEDVY 379 Query: 364 I 364 + Sbjct: 380 V 380 >gi|54289523|gb|AAV32068.1| pyruvate dehydrogenase E1 alpha subunit [Nyctotherus ovalis] Length = 381 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 155/365 (42%), Positives = 226/365 (61%), Gaps = 9/365 (2%) Query: 1 MYVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLML 60 + + + V G + A ++ ++D +P + + ++ L YR M Sbjct: 4 LALRRMSVLRGAARFASTATIKLPEYEVFNLDKSALP-----KTASTTSDEMLRYYREMN 58 Query: 61 LIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGV 120 RR E ++Y V GFCHL GQEAV VG++ +T+ D +ITAYR HG +L G Sbjct: 59 FQRRVEIMCDEIYKKKEVRGFCHLMDGQEAVSVGVEAGITKDDHLITAYRCHGVLLGRGE 118 Query: 121 DASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSD 180 A +++AE+ G+ G SKGKGGSMHM KN FYGG+GIVGA + LG GIAF Y + Sbjct: 119 TADRLLAEMMGKSTGASKGKGGSMHMSLRKNKFYGGNGIVGAHIPLGAGIAFGINYEKKK 178 Query: 181 KICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGV 240 ++CV +GD A+NQGQ++E+ N+A LW L +IY+ ENN YAMGT+ +RA+ T + + Sbjct: 179 EVCVTMYGDSASNQGQLFEAANMALLWKLPIIYLCENNLYAMGTACARATPNTKYYTKLA 238 Query: 241 SFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPA-NYRTRE 299 IPG++ DGMD+ AV+ + A +C + KGPI +E+ TYRY GHSMSDP +YR+RE Sbjct: 239 P--IPGIKGDGMDLFAVREIIKFAREWCLSGKGPICLELETYRYHGHSMSDPGLSYRSRE 296 Query: 300 EINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPA-EL 358 EI ++R DPI +V+K +L NK A+E +LKEIE RK++++ A+ PDP +L Sbjct: 297 EIAQVRKERDPIAKVKKIILDNKLATEDELKEIEKETRKVVDDVTLKAREAPWPDPEKDL 356 Query: 359 YSDIL 363 +D++ Sbjct: 357 LTDVM 361 >gi|225574263|ref|ZP_03782873.1| hypothetical protein RUMHYD_02327 [Blautia hydrogenotrophica DSM 10507] gi|225038485|gb|EEG48731.1| hypothetical protein RUMHYD_02327 [Blautia hydrogenotrophica DSM 10507] Length = 326 Score = 333 bits (854), Expect = 3e-89, Method: Composition-based stats. Identities = 129/325 (39%), Positives = 192/325 (59%), Gaps = 6/325 (1%) Query: 45 SEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQ 104 S NKE+ + Y M++IR+FEEKAG ++ G + GF HL IG+EAV G+ +L + D Sbjct: 3 STMNKEKFMDIYNRMVMIRKFEEKAGTIFSQGQLAGFLHLYIGEEAVGAGVCAALNDDDY 62 Query: 105 MITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQV 164 +++ +R HGH++A G D +KIMAEL G+ G KGKGGSMH+ G G GIVG + Sbjct: 63 IVSTHRGHGHLIAKGGDVNKIMAELFGKSTGYCKGKGGSMHVADFSKGMLGACGIVGGGI 122 Query: 165 SLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGT 224 + G A K + ++++ V FGDGA+N+G +ES N AA NL VI+++ENN Y T Sbjct: 123 PIAVGAALTIKRKHTNQVAVTFFGDGASNEGSFHESINFAAAQNLPVIFLVENNGYGEFT 182 Query: 225 SVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRY 284 +R++ N + R + IPG+ VDGMD AV T + V R +GP++IE T+R Sbjct: 183 PQNRSTRIENIADRAAGYGIPGVIVDGMDAVAVYETTKEWVEKLRNGEGPVLIEAKTHRK 242 Query: 285 RGHSMS-----DPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKI 339 GHS D YR EE ++ PIE ++K LL + A + +L+E+E ++ Sbjct: 243 VGHSEGESAFLDGQTYRLPEE-EKIAMETCPIENLKKYLLDHDLAQKEELEEVERAAQEK 301 Query: 340 INNSVEFAQSDKEPDPAELYSDILI 364 I +VE+A++ P +LY+D + Sbjct: 302 IEAAVEYAKNSPFPTEEDLYTDTWV 326 >gi|225713922|gb|ACO12807.1| Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor [Lepeophtheirus salmonis] gi|290462061|gb|ADD24078.1| Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [Lepeophtheirus salmonis] Length = 386 Score = 333 bits (854), Expect = 3e-89, Method: Composition-based stats. Identities = 166/350 (47%), Positives = 218/350 (62%), Gaps = 12/350 (3%) Query: 22 SAKRAATSSVDCVDIPFLEGFEVSE-------FNKEQELSAYRLMLLIRRFEEKAGQLYG 74 + A T+ VDI +SE +E+ L+ Y M +RR E AG LY Sbjct: 13 PVRFAHTAESVTVDIRPYRLHRLSEGPPEQSVLTREEGLNYYESMFTVRRLENAAGNLYK 72 Query: 75 MGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQG 134 V GFCHL GQEA+ +GMK +L D +IT+YR HG GV ++AELTG++ Sbjct: 73 EKAVRGFCHLSSGQEAISIGMKAALRPVDAIITSYRAHGFAYMMGVSVLGVLAELTGKKS 132 Query: 135 GISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQ 194 G+ +GKGGSMHM+ FYGG+GIVGAQV LG GIAFA KY+ + +GDGAA Q Sbjct: 133 GVVRGKGGSMHMY--AKNFYGGNGIVGAQVPLGAGIAFAQKYKEDGGVTYALYGDGAAQQ 190 Query: 195 GQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDI 254 GQVYE++N+A LW+L VI+V ENN Y MGTS RA+A T+F RG IPG+ VDGMD+ Sbjct: 191 GQVYEAYNMAKLWDLPVIFVCENNHYGMGTSQDRAAASTDFYTRGDY--IPGVLVDGMDV 248 Query: 255 RAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQ 313 AV+ AV YC + KGP++ E+ TYRY GHSMSDP YRTREE+ E+R DPI Sbjct: 249 IAVREACKFAVDYCGSGKGPLVFEIATYRYHGHSMSDPGTSYRTREEVQEIRQTQDPITG 308 Query: 314 VRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +R +++ + +LK IE +RK I+ V+ A++D E D +ELY D+ Sbjct: 309 LRDKMIDSGLVVPEELKAIEQKIRKNIDGIVKLAKTDPEIDFSELYYDVY 358 >gi|119496391|ref|XP_001264969.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Neosartorya fischeri NRRL 181] gi|119413131|gb|EAW23072.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Neosartorya fischeri NRRL 181] Length = 405 Score = 333 bits (854), Expect = 3e-89, Method: Composition-based stats. Identities = 157/378 (41%), Positives = 222/378 (58%), Gaps = 21/378 (5%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFL-----EGFEVSEF---------NK 49 + + + +A A + D PF E FE E K Sbjct: 13 PLRRQAFAPLARRSVTTDAASSHAENIPQEDDKPFTVRLSDESFETYEIDPPPYDLEVTK 72 Query: 50 EQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAY 109 ++ Y M++ RR E A +LY + GFCHL IGQEAV G++ ++T D++ITAY Sbjct: 73 KELKQMYYDMVVTRRMEMAADRLYKEKKIRGFCHLSIGQEAVATGIEHAITRDDKVITAY 132 Query: 110 REHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTG 169 R HG+ L G I+ EL GR+ GI+ GKGGSMHMF+ F+GG+GIVGAQV +G G Sbjct: 133 RCHGYALMRGGTVRSIIGELLGRREGIAYGKGGSMHMFAP--NFFGGNGIVGAQVPVGAG 190 Query: 170 IAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRA 229 +AFA +Y +V +GDGA+NQGQV+E+FN+A LW L I+ ENN+Y MGTS +R+ Sbjct: 191 LAFAQQYNEEKATSIVLYGDGASNQGQVFEAFNMAKLWKLPAIFGCENNKYGMGTSAARS 250 Query: 230 SAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSM 289 SA T++ KRG IPG++V+GMD+ A KA + A Y A GP++ E +TYRY GHSM Sbjct: 251 SALTDYYKRGQY--IPGIKVNGMDVLATKAAVQYAREYTIAGNGPLVFEYVTYRYGGHSM 308 Query: 290 SDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQ 348 SDP YR+REEI MRS +DPI +++++L +E +LK ++ + R ++ V A+ Sbjct: 309 SDPGTTYRSREEIQRMRSTNDPIAGLKQKILDWNVMTEEELKALDKSARSHVDEEVAIAE 368 Query: 349 SDKEPD--PAELYSDILI 364 P+ P L+ DI + Sbjct: 369 QMPAPENNPRILFEDIYV 386 >gi|326506962|dbj|BAJ95558.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326528715|dbj|BAJ97379.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 392 Score = 333 bits (854), Expect = 3e-89, Method: Composition-based stats. Identities = 159/332 (47%), Positives = 209/332 (62%), Gaps = 8/332 (2%) Query: 34 VDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIV 93 VD P E + +A+R M L+RR E A LY ++ GFCHL GQEAV V Sbjct: 48 VDPPSREVTTTPR----ELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAV 103 Query: 94 GMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGF 153 GM+ ++T D +ITAYR+H LA G D AEL GR G S+GKGGSMH + F Sbjct: 104 GMEAAITRRDAIITAYRDHCLYLARGGDLVAAFAELMGRVDGCSRGKGGSMHFYKKDANF 163 Query: 154 YGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIY 213 YGGHGIVGAQV LG G+AFA +YR+ + +GDGAANQGQ++E+ N+AALW L VI Sbjct: 164 YGGHGIVGAQVPLGCGLAFAQRYRKEGTVTFDLYGDGAANQGQLFEALNMAALWKLPVIL 223 Query: 214 VIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKG 273 V ENN Y MGT+ +AS + KRG +PG++VDGMD AVK A + G Sbjct: 224 VCENNHYGMGTAEWKASKSPAYYKRGDY--VPGLKVDGMDFLAVKQACKFAKEHV-LENG 280 Query: 274 PIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEI 332 PII+EM TYRY GHSMSDP + YRTR+EI +R DPIE+VRK LL + A+ +LK++ Sbjct: 281 PIILEMDTYRYHGHSMSDPGSTYRTRDEIAGIRQERDPIERVRKLLLTHDLATAQELKDM 340 Query: 333 EMNVRKIINNSVEFAQSDKEPDPAELYSDILI 364 E +RK ++ ++ A+ PD +EL+ ++ + Sbjct: 341 EKEIRKEVDTAIAKAKESPMPDTSELFKNVYV 372 >gi|302337124|ref|YP_003802330.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha [Spirochaeta smaragdinae DSM 11293] gi|301634309|gb|ADK79736.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [Spirochaeta smaragdinae DSM 11293] Length = 318 Score = 333 bits (854), Expect = 3e-89, Method: Composition-based stats. Identities = 147/317 (46%), Positives = 202/317 (63%), Gaps = 3/317 (0%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EGDQMI 106 + +Q+ + Y+ MLLIRRFEEKA Q+YG+ +GGFCHL IGQEAV G +L + D ++ Sbjct: 3 DTKQKTALYKKMLLIRRFEEKAAQMYGLRKIGGFCHLYIGQEAVATGAIGALDLKSDYIV 62 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 AYR+HGH LA G+D +MAEL G+ G SKGKGGSMHMF + +GG+GIVG+Q+ + Sbjct: 63 AAYRDHGHALASGMDPKAVMAELYGKVTGCSKGKGGSMHMFDIEKHMFGGNGIVGSQIPV 122 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 TG+ +YR D + + FGDGA +QG +ES N+A ++ L V+Y+ ENNQY MGT Sbjct: 123 ATGVGLKIRYREEDGVVLCFFGDGAIHQGAFHESLNLAKIYGLPVVYICENNQYGMGTDF 182 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R SA +FS S+ I G Q+DGMD+ V + + V R P ++E+ TYRY+G Sbjct: 183 RRVSAVDDFSVMASSYGIEGRQIDGMDVITVHENVKELVEKARKEHMPSLLEIKTYRYKG 242 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDPA YRTREE+ + DPI ++K LL + DL+ + +K+ + F Sbjct: 243 HSMSDPAKYRTREELEDY-KERDPILILKKGLLEDGV-QASDLEAWDKEAKKLSEEAASF 300 Query: 347 AQSDKEPDPAELYSDIL 363 A+ EP+ LYSDIL Sbjct: 301 AEESPEPEIEALYSDIL 317 >gi|123969019|ref|YP_001009877.1| pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. AS9601] gi|123199129|gb|ABM70770.1| Pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. AS9601] Length = 357 Score = 333 bits (854), Expect = 3e-89, Method: Composition-based stats. Identities = 126/336 (37%), Positives = 199/336 (59%), Gaps = 9/336 (2%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 I L+ + +E ++E L Y M L RRFE+K ++Y G + GF HL GQEA+ G+ Sbjct: 20 ISNLQDIKKAELDRETGLFLYEDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAISTGV 79 Query: 96 KMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 ++ + D + YR+H H L+ GV + ++M+EL G+ G SKG+GGSMH+FS ++ Sbjct: 80 IGAMKKKHDWFCSTYRDHVHALSAGVPSFEVMSELFGKSTGCSKGRGGSMHLFSREHHLL 139 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALW 207 GG+ +G + + G AF++KY++ D + FGDG N GQ +E N+A LW Sbjct: 140 GGYAFIGEGIPVALGAAFSSKYKKEVAGNSNSDAVTAAFFGDGTCNNGQFFECLNMAQLW 199 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 L +I+V+ENN++A+G + RA++ ++ +F + G +VDGMD+ AV+ +A+ Sbjct: 200 KLPIIFVVENNKWAIGMAHDRATSNPEIWRKASAFGMHGEEVDGMDVLAVRGAAQRAIER 259 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 RA +GP ++E LTYRYRGHS++DP R+ +E E DPI+++ + ++ K+A+E Sbjct: 260 ARAGEGPTLLECLTYRYRGHSLADPDELRSEKE-KEFWGKRDPIKKLAQEIIDGKFATEE 318 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +LK IE + I SV+ A EP EL I Sbjct: 319 ELKIIEKKIDAEIAESVKNAIEAPEPPSEELTKYIW 354 >gi|241955154|ref|XP_002420298.1| E1 alpha subunit of the pyruvate dehydrogenase complex, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223643639|emb|CAX42522.1| E1 alpha subunit of the pyruvate dehydrogenase complex, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 401 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 155/349 (44%), Positives = 217/349 (62%), Gaps = 15/349 (4%) Query: 27 ATSSVDCVDIP--FLEGF--EVSEFN----KEQELSAYRLMLLIRRFEEKAGQLYGMGMV 78 A S + +++P EG+ EV + KE L Y+ M++IRR E A LY + Sbjct: 28 AASDLVTIELPPTSFEGYNLEVPGLSFETEKETLLKMYKDMIIIRRMEMAADALYKSKKI 87 Query: 79 GGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK 138 GFCHL +GQEA+ VG++ ++T D +IT+YR HG G ++AEL GR+ GI+ Sbjct: 88 RGFCHLSVGQEAIAVGIENAITPTDTVITSYRCHGFAFMRGASVKSVLAELMGRRSGIAH 147 Query: 139 GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 GKGGSMHMF+ NGFYGG+GIVGAQV LG G+AF++KY+ + +GDGA+NQGQV+ Sbjct: 148 GKGGSMHMFT--NGFYGGNGIVGAQVPLGAGLAFSHKYKNDKAVTFDLYGDGASNQGQVF 205 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 E++N+A LWNL VI+ ENN+Y MGTS +R+SA T + KRG IPG++++GMD+ A Sbjct: 206 EAYNMAKLWNLPVIFACENNKYGMGTSAARSSAMTEYYKRGQY--IPGLKINGMDVLATY 263 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKR 317 A + GP+++E TYRY GHSMSDP YRTREE+ MRS +DPI ++ Sbjct: 264 QASKFAKDWASQGNGPLVLEYETYRYGGHSMSDPGTTYRTREEVQHMRSRNDPIAGLKAV 323 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSV--EFAQSDKEPDPAELYSDILI 364 LL ASE ++K + RK ++ V A + E L+ D+ + Sbjct: 324 LLEKDIASEDEIKSYDKAARKYVDEQVAAAEADAPPEAKMDILFEDVYV 372 >gi|16331186|ref|NP_441914.1| pyruvate dehydrogenase E1 component, alpha subunit [Synechocystis sp. PCC 6803] gi|1653680|dbj|BAA18592.1| pyruvate dehydrogenase E1 component, alpha subunit [Synechocystis sp. PCC 6803] Length = 342 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 132/336 (39%), Positives = 209/336 (62%), Gaps = 10/336 (2%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 +P L E+S ++E L Y M+L R FE+K ++Y G + GF HL GQEAV G+ Sbjct: 7 LPELNTAEIS-LDRETALVLYEDMVLGRFFEDKCAEMYYRGKMFGFVHLYNGQEAVSSGI 65 Query: 96 KMSLT-EGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 ++ + D + + YR+H H L+ GV A ++MAEL G++ G S+G+GGSMH+FS+ + Sbjct: 66 IKAMRQDEDYVCSTYRDHVHALSAGVPAREVMAELFGKETGCSRGRGGSMHLFSSAHNLL 125 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALW 207 GG +G + + G AF KYRR D++ FGDG +N GQ +E N+AALW Sbjct: 126 GGFAFIGEGIPVALGAAFQTKYRREVLKDDGYDQVTACFFGDGTSNNGQFFECLNMAALW 185 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 L +++V+ENN++A+G + RA++Q K+ FN+ G++VDGMD+ A+ +AVA Sbjct: 186 KLPILFVVENNKWAIGMAHERATSQPEIYKKASVFNMVGVEVDGMDVVAMHKVATEAVAR 245 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 RA +GP +IE LTYR+RGHS++DP R+ EE + + DPI++ + ++ AS Sbjct: 246 ARAGEGPTLIEALTYRFRGHSLADPDELRSAEE-KQFWAARDPIKKFAAFMTEHELASNE 304 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +LK I+ ++++I++++ FA+S EP+P +L I Sbjct: 305 ELKAIDKRIQEVIDDALAFAESSPEPNPEDLRKYIF 340 >gi|146299313|ref|YP_001193904.1| pyruvate dehydrogenase (acetyl-transferring) [Flavobacterium johnsoniae UW101] gi|146153731|gb|ABQ04585.1| Pyruvate dehydrogenase (acetyl-transferring) [Flavobacterium johnsoniae UW101] Length = 332 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 147/321 (45%), Positives = 200/321 (62%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EG 102 + E KE L Y MLL R+FE+K LY V GF HL GQEAV+ G ++ Sbjct: 1 MKEVTKEVYLKWYEDMLLWRKFEDKLAALYIQQKVRGFLHLYNGQEAVLAGALHAMDLTK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H + GVD +MAEL G+ G SKG GGSMH+FS ++GFYGGHGIVGA Sbjct: 61 DKMITAYRNHVQPIGMGVDPRNVMAELLGKATGTSKGMGGSMHIFSKEHGFYGGHGIVGA 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ +G GIAFA+KY + + + FGDGAA QG ++E+FN+A LW L V++++ENN YAM Sbjct: 121 QIPVGAGIAFADKYFNTGGVTMTYFGDGAARQGSLHEAFNMAMLWKLPVVFIVENNGYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R + T+ K G+ + +P VDGM+ V M +A+ R GP +EM TY Sbjct: 181 GTSVERTANHTDIWKLGLGYEMPCGPVDGMNPVKVAEAMHEAIERARRGDGPTFLEMKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD YR++EE+ E DPI QV +L K+A+ +++ I+ V+ ++ Sbjct: 241 RYRGHSMSDAQLYRSKEEVEEY-KKIDPITQVLDVILDQKYATAEEIEVIDQRVKDLVEE 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 +FA+ PD +LY + Sbjct: 300 CAKFAEESPYPDLQQLYDVVY 320 >gi|324511699|gb|ADY44863.1| Pyruvate dehydrogenase E1 component subunit alpha type II [Ascaris suum] Length = 434 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 149/344 (43%), Positives = 206/344 (59%), Gaps = 6/344 (1%) Query: 21 VSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGG 80 S+ R ++ EV+ ++ L+ Y M IRR E AG LY + G Sbjct: 21 ASSARVQVKPYKLHNVESGPNAEVT-VTRDDALNIYTRMQTIRRLEAAAGNLYKEQKIRG 79 Query: 81 FCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISKGK 140 FCHL G+EA VG+K ++ D +IT+YR HG CG ++ ELTGR G GK Sbjct: 80 FCHLYAGEEACAVGIKSAMEPNDAIITSYRCHGWTYLCGPSVVPVLCELTGRMNGNVHGK 139 Query: 141 GGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYES 200 GGSMHM+ + FYGG+GIVGAQ LGTG+AFA K R+ +C FGDGAANQGQ++ES Sbjct: 140 GGSMHMYG--DNFYGGNGIVGAQQPLGTGVAFAMKCRKMKNVCFTLFGDGAANQGQLFES 197 Query: 201 FNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKAT 260 NIA LWN+ V+YV ENN Y GTS RA A ++ R +PG+ VDGMD+ AV+ Sbjct: 198 MNIAKLWNIPVVYVCENNGYGFGTSTKRACAAKHYYDRVSY--MPGVWVDGMDVLAVREA 255 Query: 261 MDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINEMRSNHDPIEQVRKRLL 319 A +C A KGP+++EM TYRY GHS++DP YRTREE+ E+R D I +++++ Sbjct: 256 ARWAKEWCNAGKGPLMLEMSTYRYGGHSVADPGTSYRTREEVEEVRRTRDAINGFKEKII 315 Query: 320 HNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +E +LKEI+ +RK ++ + + A++ KE L +D+ Sbjct: 316 PTGLLTEDELKEIDKKIRKEVDEAAKMARTGKEATTDLLLTDLY 359 >gi|85083464|ref|XP_957122.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial [Neurospora crassa OR74A] gi|28918208|gb|EAA27886.1| pyruvate dehydrogenase E1 component alpha subunit, mitochondrial [Neurospora crassa OR74A] Length = 417 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 159/373 (42%), Positives = 224/373 (60%), Gaps = 20/373 (5%) Query: 4 AKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEF---------NKEQELS 54 A++ VT L + V D E FE E K++ Sbjct: 32 ARRSVTTNAASAQLEKPLPESETEPFQVTLSD----ESFETYELDPPPYTLNVTKKELKQ 87 Query: 55 AYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGH 114 Y M+++R+ E A +LY + GFCHL +GQEAV VG++ ++ D +IT+YR HG Sbjct: 88 MYYDMVVVRQMEMAADRLYKEKKIRGFCHLSVGQEAVAVGIEHAIERADDVITSYRCHGF 147 Query: 115 ILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFAN 174 G I+ EL GR+GGI+ GKGGSMHMF+ GFYGG+GIVGAQV++G G+AFA+ Sbjct: 148 AYMRGGTVRSIIGELLGRRGGIAYGKGGSMHMFTK--GFYGGNGIVGAQVAVGAGLAFAH 205 Query: 175 KYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTN 234 KY ++ +GDGA+NQGQV+ESFN+A LWNL ++ ENN+Y MGTS +R+SA T+ Sbjct: 206 KYTGRKNASIILYGDGASNQGQVFESFNMAKLWNLPALFGCENNKYGMGTSAARSSALTD 265 Query: 235 FSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-A 293 + KRG IPG++V+GMD+ AVKA + + GP+++E +TYRY GHSMSDP Sbjct: 266 YYKRGQY--IPGLKVNGMDVLAVKAAVAYGKQWTNNDNGPLVLEYVTYRYGGHSMSDPGT 323 Query: 294 NYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEP 353 YRTREEI MRS +DPI +++ +L ASE +LK ++ R +N V A++ P Sbjct: 324 TYRTREEIQRMRSTNDPIAGLKQHILEWGVASEEELKNLDKEARAYVNEEVAAAEAMPPP 383 Query: 354 DPAE--LYSDILI 364 + + L+ DI + Sbjct: 384 EANQQILFEDIYV 396 >gi|68481122|ref|XP_715476.1| hypothetical protein CaO19.10609 [Candida albicans SC5314] gi|68481263|ref|XP_715406.1| hypothetical protein CaO19.3097 [Candida albicans SC5314] gi|46437028|gb|EAK96381.1| hypothetical protein CaO19.3097 [Candida albicans SC5314] gi|46437100|gb|EAK96452.1| hypothetical protein CaO19.10609 [Candida albicans SC5314] gi|238881185|gb|EEQ44823.1| pyruvate dehydrogenase E1 component [Candida albicans WO-1] Length = 401 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 155/349 (44%), Positives = 218/349 (62%), Gaps = 15/349 (4%) Query: 27 ATSSVDCVDIP--FLEGF--EVSEFN----KEQELSAYRLMLLIRRFEEKAGQLYGMGMV 78 A S + +++P EG+ EV + KE L Y+ M++IRR E A LY + Sbjct: 28 AASDLVTIELPASSYEGYNLEVPALSFETEKETLLKMYKDMIIIRRMEMAADALYKSKKI 87 Query: 79 GGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASKIMAELTGRQGGISK 138 GFCHL +GQEA+ VG++ ++T D +IT+YR HG G ++AEL GR+ GI+ Sbjct: 88 RGFCHLSVGQEAIAVGIENAITPTDTVITSYRCHGFAFMRGASVKSVLAELMGRRSGIAN 147 Query: 139 GKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVY 198 GKGGSMHMF+ NGFYGG+GIVGAQV LG G+AF++KY+ + +GDGA+NQGQV+ Sbjct: 148 GKGGSMHMFT--NGFYGGNGIVGAQVPLGAGLAFSHKYKNDKAVTFDLYGDGASNQGQVF 205 Query: 199 ESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVK 258 E++N+A LWNL VI+ ENN+Y MGTS +R+SA T + KRG IPG++++GMD+ A Sbjct: 206 EAYNMAKLWNLPVIFACENNKYGMGTSAARSSAMTEYYKRGQY--IPGLKINGMDVLATY 263 Query: 259 ATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREEINEMRSNHDPIEQVRKR 317 A + GP+++E TYRY GHSMSDP YRTREE+ MRS +DPI ++ Sbjct: 264 QASKFAKDWASQGNGPLVLEYETYRYGGHSMSDPGTTYRTREEVQHMRSRNDPIAGLKAV 323 Query: 318 LLHNKWASEGDLKEIEMNVRKIINNSV--EFAQSDKEPDPAELYSDILI 364 LL + ASE ++K + RK ++ V A + E L+ D+ + Sbjct: 324 LLEKEIASEDEIKSYDKAARKYVDEQVAAAEADAPPEAKMDILFEDVYV 372 >gi|3851005|gb|AAC72195.1| pyruvate dehydrogenase E1 alpha subunit [Zea mays] Length = 392 Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats. Identities = 159/363 (43%), Positives = 223/363 (61%), Gaps = 14/363 (3%) Query: 2 YVAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVSEFNKEQELSAYRLMLL 61 ++A + ++ + + SV VD P + + ++ +R M L Sbjct: 22 FMAARPISDSTAALTIETSVPFTSH------LVDPPSRD----VTTTPAELVTFFRDMSL 71 Query: 62 IRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVD 121 +RR E A LY ++ GFCHL GQEAV VGM+ ++T D +ITAYR+H LA G D Sbjct: 72 MRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRSDSIITAYRDHCTYLARGGD 131 Query: 122 ASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDK 181 +EL GR+ G S+GKGGSMH + FYGGHGIVGAQV LG G+AFA KY++ D Sbjct: 132 LVSAFSELMGREAGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQKYKKEDT 191 Query: 182 ICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVS 241 +GDGAANQGQ++E+ NI+ALW L I V ENN Y MGT+ RA+ + KRG Sbjct: 192 ATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDY 251 Query: 242 FNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANYRTREE 300 +PG++VDGMD+ AVK A + A+ GPI++EM TYRY GHSMSDP + YRTR+E Sbjct: 252 --VPGLKVDGMDVLAVKQACKFAKDHAVAN-GPIVLEMDTYRYHGHSMSDPGSTYRTRDE 308 Query: 301 INEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYS 360 I+ +R DPIE+VRK LL + A+ +LK +E +RK +++++ A+ PD +EL++ Sbjct: 309 ISGVRQERDPIERVRKLLLTHDLANAAELKNMEKEIRKQVDDAIAKAKESSMPDTSELFT 368 Query: 361 DIL 363 ++ Sbjct: 369 NVY 371 >gi|312862970|ref|ZP_07723210.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus vestibularis F0396] gi|311101830|gb|EFQ60033.1| putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Streptococcus vestibularis F0396] Length = 323 Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats. Identities = 120/322 (37%), Positives = 187/322 (58%), Gaps = 1/322 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + + +KE L + M IR F+ + +L G V G H +G+EA VG L+ D Sbjct: 1 MVKLSKETHLEMFTKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVQHLSYDD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + +R HG +A +D +K+MAEL G+ G+SKG+GGSMH+ + G YG +GIVG Sbjct: 61 IFFSNHRGHGQSIAQDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGG 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 +L G A +Y+ + I V GDGA N+G +ES N+AA W L VI+ I NN+Y + Sbjct: 121 YALAVGAALTQQYKETGNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGIS 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQV-DGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 + +A+ + R ++ IPG DG D+ AV TM KAV + R GP I+E+ +Y Sbjct: 181 MDIHKATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYDTMGKAVDHVRGGNGPAIVEVESY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 R+ GHS +D YRT+EE++E ++N+DPI + R L+ AS +L I+ V+ +++ Sbjct: 241 RWFGHSTADAGVYRTKEEVDEWKNNNDPIIKYRDYLVSENIASAEELDAIQSQVKTEVDS 300 Query: 343 SVEFAQSDKEPDPAELYSDILI 364 + EFAQ+ +P+ + + D+ + Sbjct: 301 AYEFAQNSPDPELSVAFEDVWV 322 >gi|324510505|gb|ADY44393.1| Pyruvate dehydrogenase E1 component subunit alpha type II [Ascaris suum] gi|324510629|gb|ADY44445.1| Pyruvate dehydrogenase E1 component subunit alpha type II [Ascaris suum] Length = 445 Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats. Identities = 153/360 (42%), Positives = 214/360 (59%), Gaps = 9/360 (2%) Query: 9 TVGDIKMALNPSVSAKRAATSSV--DCVDIPFLEGFEVSEFN--KEQELSAYRLMLLIRR 64 V L P +S + A+++ V + +E +E ++ L+ Y M IRR Sbjct: 15 RVTATCRFLPPLISHRFASSARVQVKPYKLHNVESGPNAEVTVTRDDALNIYTRMQTIRR 74 Query: 65 FEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHILACGVDASK 124 E AG LY + GFCHL G+EA VG+K ++ D +IT+YR HG CG Sbjct: 75 LEAAAGNLYKEQKIRGFCHLYAGEEACAVGIKSAMEPNDAIITSYRCHGWTYLCGPSVVP 134 Query: 125 IMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKYRRSDKICV 184 ++ ELTGR G GKGGSMHM+ + FYGG+GIVGAQ LGTG+AFA K R+ +C Sbjct: 135 VLCELTGRMNGNVHGKGGSMHMYG--DNFYGGNGIVGAQQPLGTGVAFAMKCRKMKNVCF 192 Query: 185 VCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNI 244 FGDGAANQGQ++ES NIA LWN+ V+YV ENN Y GTS RA A ++ R + Sbjct: 193 TLFGDGAANQGQLFESMNIAKLWNIPVVYVCENNGYGFGTSTKRACAAKHYYDRVSY--M 250 Query: 245 PGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDPAN-YRTREEINE 303 PG+ VDGMD+ AV+ A +C A KGP+++EM TYRY GHS++DP YRTREE+ E Sbjct: 251 PGVWVDGMDVLAVREAARWAKEWCNAGKGPLMLEMSTYRYGGHSVADPGTSYRTREEVEE 310 Query: 304 MRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +R D I +++++ +E +LKEI+ +RK ++ + + A++ KE L +D+ Sbjct: 311 VRRTRDAINGFKEKVIPTGLLTEDELKEIDKKIRKEVDEAAKMARTGKEATTDLLLTDLY 370 >gi|116694104|ref|YP_728315.1| acetoin dehydrogenase E1 component alpha-subunit [Ralstonia eutropha H16] gi|113136|sp|P27745|ACOA_RALEH RecName: Full=Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha; Short=Acetoin:DCPIP oxidoreductase-alpha; Short=Ao:DCPIP OR gi|141894|gb|AAA21948.1| acetoin:DCPIP oxidoreductase-alpha [Ralstonia eutropha H16] gi|113528603|emb|CAJ94950.1| acetoin dehydrogenase E1 component alpha-subunit [Ralstonia eutropha H16] Length = 333 Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats. Identities = 119/319 (37%), Positives = 179/319 (56%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 +KE L+ YR M IR FEE+ +G G + GF HL G+EA VG+ L +GD++ Sbjct: 13 PLDKETLLTVYRKMRTIRDFEERLHVDFGRGDIPGFVHLYAGEEAAGVGILHHLNDGDRI 72 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GVD +M E+ G++GG GKGGSMH+ G G +GI+GA Sbjct: 73 ASTHRGHGHCIAKGVDPVAMMKEIYGKKGGSCNGKGGSMHIADLSKGMMGANGILGAGAP 132 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A A K+R ++ + GDGA+NQG ES N+AA+WNL VI+VIENN YA TS Sbjct: 133 LICGAALAAKFRGKGEVGITFCGDGASNQGTFLESLNLAAVWNLPVIFVIENNGYAESTS 192 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 +A ++ R F IPG+ VDG D AV + + R GP ++E R+ Sbjct: 193 RDYGTAVDSYVDRAAGFGIPGVTVDGTDFFAVHEAAGEVIRRAREGGGPSLLECKMVRFY 252 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR E++++R+N D ++ + + + +L I+ V +I ++V+ Sbjct: 253 GHFEGDAQTYRAAGELDDIRANKDCLKLFGRAVTQAGVVAREELDTIDREVAALIEHAVQ 312 Query: 346 FAQSDKEPDPAELYSDILI 364 A++ +P P +L +D+ + Sbjct: 313 EAKAAPQPGPEDLLTDVYV 331 >gi|86133706|ref|ZP_01052288.1| pyruvate dehydrogenase E1 component, alpha subunit [Polaribacter sp. MED152] gi|85820569|gb|EAQ41716.1| pyruvate dehydrogenase E1 component, alpha subunit [Polaribacter sp. MED152] Length = 329 Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats. Identities = 144/321 (44%), Positives = 199/321 (61%), Gaps = 2/321 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLT-EG 102 + + KE L Y+ ML R+FE+K +Y V GF HL GQEA++ G ++ Sbjct: 1 MKKITKETYLDWYKNMLFWRKFEDKLASVYIQQKVRGFLHLYNGQEAILAGALHAMDLSK 60 Query: 103 DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGA 162 D+MITAYR H + G D K+MAEL G+ G SKG GGSMH+FS + GFYGGHGIVG Sbjct: 61 DKMITAYRNHVQPIGMGEDPKKVMAELYGKATGTSKGMGGSMHIFSKEFGFYGGHGIVGG 120 Query: 163 QVSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAM 222 Q+ LG GIAFA+KY+ SD + + CFGDGAA QG ++E+FN+A LW L VI++ ENN YAM Sbjct: 121 QIPLGAGIAFADKYKGSDGVTLTCFGDGAARQGSLHEAFNLAMLWKLPVIFICENNGYAM 180 Query: 223 GTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTY 282 GTSV R + T+ K G+ + +P VD M+ V +D+A+ R GP +EM TY Sbjct: 181 GTSVERTANHTDIWKLGLGYEMPCGPVDAMNPIKVAEAIDEALQRARRGDGPTFLEMKTY 240 Query: 283 RYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINN 342 RYRGHSMSD +YRT++E+ E DPI QV+ + +A+E ++ I+ V+ ++ Sbjct: 241 RYRGHSMSDAQHYRTKDEVEEY-KKIDPITQVKDVIFEKGYATEDEISAIDKEVKAMVKE 299 Query: 343 SVEFAQSDKEPDPAELYSDIL 363 +FA P+ +LY + Sbjct: 300 CEKFADESPYPETQQLYDMVY 320 >gi|298491054|ref|YP_003721231.1| pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha ['Nostoc azollae' 0708] gi|298232972|gb|ADI64108.1| pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit ['Nostoc azollae' 0708] Length = 345 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 137/327 (41%), Positives = 205/327 (62%), Gaps = 10/327 (3%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKM-SLTEG-D 103 + K + L Y M L R FE+K ++Y G + GF HL GQEAV G+ ++ G D Sbjct: 16 QITKVEGLRLYEDMTLGRFFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGIIQGAMRPGED 75 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 + + YR+H H L+ GV A ++MAEL G+ G SKG+GGSMHMFS ++ GG+ V Sbjct: 76 FVSSTYRDHVHALSSGVPAREVMAELFGKATGCSKGRGGSMHMFSAEHRLLGGYAFVAEG 135 Query: 164 VSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIE 216 + + G AF +KYRR D++ FGDGAAN GQ +E+ N+AALW L +++V+E Sbjct: 136 IPVAAGAAFQSKYRREVLGDKNADQVTACFFGDGAANNGQFFETLNMAALWKLPILFVVE 195 Query: 217 NNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPII 276 NN++A+G + RA++ K+ FN+ G++VDGMD+ AV+ +AVA RA +GP + Sbjct: 196 NNKWAIGMAHDRATSDPEIHKKASVFNMVGVEVDGMDVLAVRQVAQEAVARARAGEGPTL 255 Query: 277 IEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNV 336 IE +TYR+RGHS++DP R++EE S DPI+++ L+ A+ +LK IE + Sbjct: 256 IEAMTYRFRGHSLADPDELRSKEEKEYWFS-RDPIKKLATYLVEQNLATGEELKAIEKKI 314 Query: 337 RKIINNSVEFAQSDKEPDPAELYSDIL 363 +++I+ +V+FA+S EPD +ELY I Sbjct: 315 QEVIDEAVKFAESSPEPDASELYRFIF 341 >gi|238489957|ref|XP_002376216.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Aspergillus flavus NRRL3357] gi|220698604|gb|EED54944.1| pyruvate dehydrogenase E1 component alpha subunit, putative [Aspergillus flavus NRRL3357] Length = 405 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 160/371 (43%), Positives = 228/371 (61%), Gaps = 15/371 (4%) Query: 3 VAKQDVTVGDIKMALNPSVSAKRAATSSVDCVDIPFLEGFEVS------EFNKEQELSAY 56 +A++ VT D + +V + +V D F E +E+ E K++ Y Sbjct: 22 LARRSVT-TDAASSHAENVPQEDDKPFTVQLSDESF-ETYEIDPPPYTLEVTKKELKQMY 79 Query: 57 RLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMITAYREHGHIL 116 M+ RR E A +LY + GFCHL GQEAV G++ ++T D++ITAYR HG+ Sbjct: 80 HDMVSTRRMEMAADRLYKEKKIRGFCHLSTGQEAVATGIEHAITRDDKIITAYRCHGYAY 139 Query: 117 ACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLGTGIAFANKY 176 G I+ EL GR+ GI+ GKGGSMHMF+ FYGG+GIVGAQV +G G+AFA +Y Sbjct: 140 MRGGTIRSIIGELLGRREGIAYGKGGSMHMFAP--NFYGGNGIVGAQVPVGAGLAFAQQY 197 Query: 177 RRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVSRASAQTNFS 236 +V +GDGA+NQGQV+E+FN+A LWNL V++ ENN+Y MGTS +R+SA T + Sbjct: 198 NEEPTTSIVLYGDGASNQGQVFEAFNMAKLWNLPVLFGCENNKYGMGTSAARSSALTEYY 257 Query: 237 KRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRGHSMSDP-ANY 295 KRG IPG++V+GMD+ A KA + A Y + GP+++E +TYRY GHSMSDP Y Sbjct: 258 KRGQY--IPGIKVNGMDVLATKAAVQYAKNYAVSGNGPLVMEYVTYRYGGHSMSDPGTTY 315 Query: 296 RTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEFAQSDKEPDP 355 R+REEI MRS HDPI +++++L K +E +LK ++ R ++ V A++ PD Sbjct: 316 RSREEIQRMRSTHDPIAGLKQKILDWKVMTEDELKALDKAARAFVDEEVSIAENMPVPDN 375 Query: 356 AE--LYSDILI 364 + L+ DI + Sbjct: 376 STRILFEDIYV 386 >gi|328770234|gb|EGF80276.1| hypothetical protein BATDEDRAFT_19685 [Batrachochytrium dendrobatidis JAM81] Length = 392 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 153/318 (48%), Positives = 214/318 (67%), Gaps = 6/318 (1%) Query: 48 NKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMIT 107 + + L+ Y M+LIRR E Y ++ GFCHL GQEA+ GM+ ++T+ D +IT Sbjct: 59 TRSELLAFYENMVLIRRLETACDNAYKGKLIRGFCHLSTGQEAIASGMEAAITKADSIIT 118 Query: 108 AYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSLG 167 AYR HG + G ++I++EL GR+ G SKGKGGSMH+F+ + FYGG+GIVGAQV +G Sbjct: 119 AYRCHGFTMNRGGTPTEIISELMGRRAGSSKGKGGSMHLFAPE--FYGGNGIVGAQVPVG 176 Query: 168 TGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSVS 227 GIA A++Y++ D +C +GDGAANQGQV+E++N+A LWNL V +V ENN Y MGT Sbjct: 177 AGIALAHQYQKKDAMCFSMYGDGAANQGQVFEAYNMAKLWNLPVAFVCENNMYGMGTPAG 236 Query: 228 RASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY-CRAHKGPIIIEMLTYRYRG 286 RA+A T + RG +PG++VDGMD+ AV+ A + KGPI++EM+TYRY G Sbjct: 237 RAAASTKYFTRGDY--VPGVRVDGMDVLAVREACRYARDWTVTQAKGPIVLEMVTYRYGG 294 Query: 287 HSMSDP-ANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 HSMSDP YRTREEI MRS D I +++++L A+E +LK IE R I+ +VE Sbjct: 295 HSMSDPGTTYRTREEIQRMRSTSDCINLLKEKILSTNSATEDELKAIEKKARAEIDQAVE 354 Query: 346 FAQSDKEPDPAELYSDIL 363 +++ EPD +EL++D+ Sbjct: 355 ESKASPEPDMSELFTDVY 372 >gi|529561|gb|AAB58979.1| TPP-dependent acetoin dehydrogenase alpha-subunit [Pseudomonas putida] gi|1093517|prf||2104227B acetoin dehydrogenase:SUBUNIT=alpha Length = 325 Score = 332 bits (852), Expect = 5e-89, Method: Composition-based stats. Identities = 117/319 (36%), Positives = 179/319 (56%) Query: 46 EFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQM 105 + + EQ L AY +M IR FEE+ + G + GF HL G+EA G+ L + D + Sbjct: 4 QLSTEQLLHAYEVMRTIRAFEERLHVEFATGEIPGFVHLYAGEEASAAGVMAHLRDSDCI 63 Query: 106 ITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVS 165 + +R HGH +A GVD +MAE+ G++ G+ GKGGSMH+ + G G +GIVGA Sbjct: 64 ASTHRGHGHCIAKGVDVYGMMAEIYGKKTGVCGGKGGSMHIADLEKGMLGANGIVGAGAP 123 Query: 166 LGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTS 225 L G A A K + D + V FGDGA+N+G V+E+ N+A++ NL I+V ENN YA T+ Sbjct: 124 LVAGAALAAKIKGKDDVSVAFFGDGASNEGAVFEAMNMASIMNLPCIFVAENNGYAEATA 183 Query: 226 VSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYR 285 + + A + + R F +PG+ +DG D AV A+ R+ +GP +IE+ RY Sbjct: 184 SNWSVACDHIADRAAGFGMPGVTIDGFDFFAVYEAAGAAIERARSGQGPSLIEVKLSRYY 243 Query: 286 GHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVE 345 GH D YR +E+ +R + D + Q R + + L I+ + +I ++V Sbjct: 244 GHFEGDAQTYRAPDEVKNLRESRDCLMQFRNKTTRAGLLTAEQLDAIDARIEDLIEDAVR 303 Query: 346 FAQSDKEPDPAELYSDILI 364 A+SD +P PA+L +D+ + Sbjct: 304 RAKSDPKPQPADLLTDVYV 322 >gi|297184165|gb|ADI20284.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11] Length = 331 Score = 332 bits (852), Expect = 5e-89, Method: Composition-based stats. Identities = 142/317 (44%), Positives = 193/317 (60%), Gaps = 1/317 (0%) Query: 47 FNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGDQMI 106 K L Y ML R+FE+ A LY + GF HL GQEA++ G ++ +GD MI Sbjct: 6 ITKATYLKWYEDMLFWRKFEDMAAALYIQQKIRGFLHLYNGQEAILAGSAYAMEDGDNMI 65 Query: 107 TAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQVSL 166 TAYR H +A G D +IMAEL G+ G S+GKGGSMHMFS GF+GGHGIVG Q+ L Sbjct: 66 TAYRNHVQPMALGEDPRRIMAELMGKVTGTSRGKGGSMHMFSPDKGFWGGHGIVGGQIPL 125 Query: 167 GTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMGTSV 226 G G+AFA++Y + + GDGA QG +E+ N+A LW L V++ +ENN YAMGTSV Sbjct: 126 GAGLAFADQYFGRKNVTLTYMGDGAIRQGAWHETANLAMLWKLPVVFCVENNGYAMGTSV 185 Query: 227 SRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYRYRG 286 R + QT K G +++P VDGMD AV + +A R GP ++E+ TYRY+G Sbjct: 186 ERTAGQTPIHKLGEGYDMPNRAVDGMDPIAVYDAVYEASERARRGDGPTLLEIRTYRYKG 245 Query: 287 HSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNSVEF 346 HSMSDP YRT+EE+ E ++ DPI ++ WA+E +++ I V+ ++ V+F Sbjct: 246 HSMSDPQKYRTKEEVAEYQAK-DPITLCLNKIKEKNWATEEEIESIIQRVKDVVAECVKF 304 Query: 347 AQSDKEPDPAELYSDIL 363 A+ PD +ELY I Sbjct: 305 AEESDFPDASELYQGIY 321 >gi|78779768|ref|YP_397880.1| pyruvate dehydrogenase E1 alpha subunit [Prochlorococcus marinus str. MIT 9312] gi|78713267|gb|ABB50444.1| Pyruvate dehydrogenase (lipoamide) [Prochlorococcus marinus str. MIT 9312] Length = 357 Score = 332 bits (852), Expect = 5e-89, Method: Composition-based stats. Identities = 126/336 (37%), Positives = 200/336 (59%), Gaps = 9/336 (2%) Query: 36 IPFLEGFEVSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGM 95 I L+ + ++ ++E L Y M L RRFE+K ++Y G + GF HL GQEA+ G+ Sbjct: 20 ISNLQDIKKAKLDRETGLFLYEDMTLGRRFEDKCAEMYYRGKMFGFVHLYNGQEAISTGV 79 Query: 96 KMSLTEG-DQMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFY 154 ++ + D + YR+H H L+ GV + ++M+EL G+ G SKG+GGSMH+FS ++ Sbjct: 80 IGAMRKKHDWFCSTYRDHVHALSAGVPSFEVMSELFGKATGCSKGRGGSMHLFSKEHHLL 139 Query: 155 GGHGIVGAQVSLGTGIAFANKYRRS-------DKICVVCFGDGAANQGQVYESFNIAALW 207 GG+ +G + + G AF++KY++ D + FGDG N GQ +E N+A LW Sbjct: 140 GGYAFIGEGIPVALGAAFSSKYKKEVAGNNSSDSVTAAFFGDGTCNNGQFFECLNMAQLW 199 Query: 208 NLNVIYVIENNQYAMGTSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAY 267 L +I+V+ENN++A+G + RA++ ++ +F + G +VDGMD+ AV+ +A+ Sbjct: 200 KLPIIFVVENNKWAIGMAHDRATSNPEIWRKASAFGMHGEEVDGMDVLAVRGAAQRAIER 259 Query: 268 CRAHKGPIIIEMLTYRYRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEG 327 RA +GP ++E LTYRYRGHS++DP R+ E E S DPI+++ +++ K+A+E Sbjct: 260 ARAGEGPTLLECLTYRYRGHSLADPDELRSERE-KEFWSKRDPIKKLAHEIINGKFATEE 318 Query: 328 DLKEIEMNVRKIINNSVEFAQSDKEPDPAELYSDIL 363 +LK IE + I+ SV+ A EP EL I Sbjct: 319 ELKIIEKKIDTEISESVKNALEAPEPPSQELTKYIW 354 >gi|149200385|ref|ZP_01877402.1| dehydrogenase complex, E1 component, alpha subunit [Lentisphaera araneosa HTCC2155] gi|149136508|gb|EDM24944.1| dehydrogenase complex, E1 component, alpha subunit [Lentisphaera araneosa HTCC2155] Length = 320 Score = 332 bits (852), Expect = 5e-89, Method: Composition-based stats. Identities = 124/320 (38%), Positives = 186/320 (58%), Gaps = 1/320 (0%) Query: 44 VSEFNKEQELSAYRLMLLIRRFEEKAGQLYGMGMVGGFCHLCIGQEAVIVGMKMSLTEGD 103 + KE+ L M+ +RRFEE + Y + GFCH IGQEAV VG LT D Sbjct: 1 MKNIGKEKALQMLEQMIRVRRFEEGCLKSYQQKFITGFCHTYIGQEAVAVGAMAHLTPTD 60 Query: 104 QMITAYREHGHILACGVDASKIMAELTGRQGGISKGKGGSMHMFSTKNGFYGGHGIVGAQ 163 +T+YR H L G+ + ++MAE+ G+ G +GKGGSMH+FS KN + GGHGIVG Q Sbjct: 61 AYVTSYRCHAQGLIGGLTSREVMAEMFGKITGCVRGKGGSMHVFSKKNNYLGGHGIVGGQ 120 Query: 164 VSLGTGIAFANKYRRSDKICVVCFGDGAANQGQVYESFNIAALWNLNVIYVIENNQYAMG 223 + +G G AFA KY + + + FGDGA+ QG +ES N+A+LW++ VI++ ENNQY MG Sbjct: 121 IPIGLGAAFALKYEEKEGVALTFFGDGASMQGTFHESLNLASLWDVPVIFICENNQYGMG 180 Query: 224 TSVSRASAQTNFSKRGVSFNIPGMQVDGMDIRAVKATMDKAVAYCRAHKGPIIIEMLTYR 283 TS RA A S ++ + G +VDGM++ A + +A C+ + P ++ + TYR Sbjct: 181 TSNDRALANPQVSDFAAAYKMKGYEVDGMNLEASYKAFGEIIADCKKNSRPALVNVTTYR 240 Query: 284 YRGHSMSDPANYRTREEINEMRSNHDPIEQVRKRLLHNKWASEGDLKEIEMNVRKIINNS 343 Y+GHS+SD YRT++E+ + DPI K + W E K ++ ++ + ++ Sbjct: 241 YQGHSVSDAGLYRTKDEVKCWKEK-DPINSFYKSMEEQGWIDEEGYKALDKEMKAEVKDA 299 Query: 344 VEFAQSDKEPDPAELYSDIL 363 ++FA+ P EL + + Sbjct: 300 LDFAKESPWPPMDELTNHVY 319 >gi|307287225|ref|ZP_07567293.1| TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit [Enterococcus faecalis TX0109] gi|315641491|ref|ZP_07896563.1| acetoin:2,