HHsearch alignment for GI: 255764494 and conserved domain: pfam08841
>pfam08841 DDR Diol dehydratase reactivase ATPase-like domain. Diol dehydratase (DDH, EC:4.2.1.28) and its isofunctional homologue glycerol dehydratase (GDH, EC.4.2.1.30) are enzymes which catalyse the conversion of glycerol 1,2-propanediol, and 1,2-ethanediol to aldehydes. These reactions require coenzyme B12. Cleavage of the Co-C bond of coenzyme B12 by substrates or coenzyme analogues results in inactivation during which coenzyme B12 remains tightly bound to the apoenzyme. This family comprises of the large subunit of the diol dehydratase and glycerol dehydratase reactivating factors whose function is to reactivate the holoenzyme by exchange of a damaged cofactor for intact coenzyme.
Probab=97.15 E-value=0.00046 Score=49.48 Aligned_cols=185 Identities=24% Similarity=0.253 Sum_probs=83.4
Q ss_pred CCCCCCCCCCHHHHHHHHHCC-CCCCCEEEEEEECCCEEEEEEEEECCCEEEE-ECCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 222222221024788886034-4565507998724411454310102314654-20133224552134476655367876
Q gi|255764494|r 162 GLDVLRIINEPTAAALAYGLD-KKDARTVIVFDFGGGTFDVSLLEMGDGVFEV-KATNGDTFLGGEDFDSCLVEHICDTF 239 (652)
Q Consensus 162 Gl~v~~li~EptAAal~Y~~~-~~~~~~vlV~D~Gggt~dvsi~~~~~~~~~v-l~~~gd~~lGG~d~D~~l~~~~~~~~ 239 (652)
T Consensus 109 g~~v~igg~EaemAi~GA-lTTPGt~~plaIlDlGaGStDasii~~~g~v~a~HlAGA------G~mVTmlI~------- 174 (332)
T pfam08841 109 GVPVEIGGVEAEAAILGA-LTTPGTPKPLAILDLGAGSTDASIINAEGTVTATHLAGA------GEMVTMLIN------- 174 (332)
T ss_pred CCCEEECCCCHHHHHHHC-CCCCCCCCCEEEEECCCCCCCHHHHCCCCCEEEEEECCC------CHHHHHHHH-------
T ss_conf 982697450588887403-369899998389964898533888288984899974386------137599998-------
Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC-------CCCCCCCCCCEEE--EEECCCCCCCCCCC-CHH
Q ss_conf 4201343024478999999999988541155650358630-------4434678872126--87311000012342-000
Q gi|255764494|r 240 KKENGIDLKQDTLALQRLKEAAEKAKIELSSTSQTEINLP-------FISANSAGAQHLN--MKLTRAQFERLVNH-LIQ 309 (652)
Q Consensus 240 ~~~~~~d~~~~~~a~~rL~~~~e~aK~~LS~~~~~~i~i~-------~~~~~~~~g~d~~--~~itR~~fe~l~~~-l~~ 309 (652)
T Consensus 175 -seLGl~----d~~L------AE~IKkyPlaKVEslf~irhEDG~v~Ff~~-pl~p~~faRvv~~k~~~lvPi~~~~~~E 242 (332)
T pfam08841 175 -SELGLE----DRAL------AEDIKKYPLAKVESLFHIRHEDGRVQFFEE-PLPPSVFARVVILKEDGLVPLDGDLSIE 242 (332)
T ss_pred -HHHCCC----CHHH------HHHHHHCCHHHHCCCEEEEECCCCEEEECC-CCCHHHHEEEEEECCCCEEECCCCCCHH
T ss_conf -864899----5788------988743624542344268852772697269-8996792578996279514169854489
Q ss_pred HHH------------HCCCCCCHHCC--CCCEEEEEEEECCCCCCHHHHHHHHHHCC-------CC-CCCCCCCCCCHHH
Q ss_conf 011------------00111101013--56311014663078530567788654101-------11-1111356531011
Q gi|255764494|r 310 KTV------------EPCKKCLQDAG--LSPSDIDEVVLVGGMTRMPKIQQSVQDFF-------NK-SPSKGVNPDEVVA 367 (652)
Q Consensus 310 ~~~------------~~i~~~L~~a~--~~~~~I~~V~lvGGssriP~v~~~i~~~f-------g~-~~~~~~npdeaVa 367 (652)
T Consensus 243 kir~vRr~aK~kVfvtNa~RaL~~vsP~gnir~i~fVVLvGGsALDfEip~~vtdaLs~y~vVaGrgNIrG~eGPRnAVA 322 (332)
T pfam08841 243 KIKSVRRSAKERVFVTNALRALKQVSPTGNIRDIPFVVLVGGSALDFEIPQLVTEALSHYGVVAGRGNIRGVEGPRNAVA 322 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHH
T ss_conf 99999998645645998999998429888867787599955714422378999998750752343256456767368899
Q ss_pred HHHHH
Q ss_conf 11100
Q gi|255764494|r 368 MGAAI 372 (652)
Q Consensus 368 ~GAA~ 372 (652)
T Consensus 323 tGLvl 327 (332)
T pfam08841 323 TGLVL 327 (332)
T ss_pred HHHHH
T ss_conf 99898