PSIBLAST alignment of GI: 255764494 and protein with PDB id: 1hjo

>gi|6729803|pdb|1HJO|A Chain A, Heat-Shock 70kd Protein 42kd Atpase N-Terminal Domain Length = 380
 Score =  333 bits (854), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 200/384 (52%), Positives = 261/384 (67%), Gaps = 11/384 (2%)

Query: 2   SKVIGIDLGTTNSCVAIMDGKNVRVIENAEGTRTTPSMVGFTDEGERLVGQPAKRQAVTN 61
           +  IGIDLGTT SCV +     V +I N +G RTTPS V FTD  ERL+G  AK Q   N
Sbjct: 2   AAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVALN 60

Query: 62  PSNTIFAAKRLIGRRFNDSTVAKDASLVPFKIVEGKGGD---AWIEAQGKQYSPSQISAI 118
           P NT+F AKRLIGR+F D  V  D    PF+++            + + K + P +IS++
Sbjct: 61  PQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSM 120

Query: 119 VLQKMKETAESFLGETVSKAVITVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALA 178
           VL KMKE AE++LG  V+ AVITVPAYFND+QRQATKDAG IAGL+VLRIINEPTAAA+A
Sbjct: 121 VLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIA 180

Query: 179 YGLDK--KDARTVIVFDFGGGTFDVSLLEMGDGVFEVKATNGDTFLGGEDFDSCLVEHIC 236
           YGLD+  K  R V++FD GGGTFDVS+L + DG+FEVKAT GDT LGGEDFD+ LV H  
Sbjct: 181 YGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFV 240

Query: 237 DTFKKENGIDLKQDTLALQRLKEAAEKAKIELSSTSQTEINLPFISANSAGAQHLNMKLT 296
           + FK+++  D+ Q+  A++RL+ A E+AK  LSS++Q  + +                +T
Sbjct: 241 EEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDS----LFEGIDFYTSIT 296

Query: 297 RAQFERLVNHLIQKTVEPCKKCLQDAGLSPSDIDEVVLVGGMTRMPKIQQSVQDFFNKSP 356
           RA+FE L + L + T+EP +K L+DA L  + I ++VLVGG TR+PK+Q+ +QDFFN   
Sbjct: 297 RARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRD 356

Query: 357 -SKGVNPDEVVAMGAAIQAGVLQG 379
            +K +NPDE VA GAA+QA +L G
Sbjct: 357 LNKSINPDEAVAYGAAVQAAILMG 380