255764495

255764495

putative phosphoesterase protein

GeneID in NCBI database:8209608Locus tag:CLIBASIA_02480
Protein GI in NCBI database:255764495Protein Accession:YP_003065022.2
Gene range:-(666731, 667660)Protein Length:309aa
Gene description:putative phosphoesterase protein
COG prediction:[R] Predicted phosphohydrolases
KEGG prediction:putative phosphoesterase protein
SEED prediction:putative phosphohydrolases, Icc family
Pathway involved in KEGG:not defined
Subsystem involved in SEED:- none -
sequencesequence profile

Prediction of Local Sequence Properties

SourceSummaryResult
scaler
NCBI Databasesequence
PSIPREDsecondary structure
SSPROsecondary structure
DISEMBLcoil and loop
DISEMBLflexible loop
SEGlow complexity
DISOPREDdisordered
DISEMBLmissing residues
DISPROdisordered
TMHMMnone TM-Helix
TOPPRED2 TM-Helix
HMMTOP1 TM-Helix
MEMSATnone TM-Helix
MEMSAT_SVMnone TM-Helix
PHOBIUSnone TM-Helix
SignalP_HMMno
SignalP_NNno
COILScoiled coil
70% MSAconservation map
90% MSAconservation map
  
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
MTKRYTTIMFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHVSITGDIVNFTCNREIFTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFGQEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEKKLIPVVGIASASQKVHSNKPQASYNLFYIEKKNEYWTLEGKRYTLSPDSLSIQKDYSDIFYDTLVL
cccccccccEEEEEEEEccccccccHHHccccEEEEEEEccccccccccHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHHHHccccccccccccEEEEEcccEEEEEEccccccccccccccccHHHHHHHHHHHHHccccccEEEEEEEccccccccccccccccHHHHHHHHHHccccEEEEccEEccEEEEEEcccccEEEEEccccccccccccccccEEEEEEEcccccEEEEEEEEccccccEEEEHHHHHHHHHHccc
ccccHHHHHHHHHHHccccccccccHHHHHcHHHHHHHHHcHcHHHHccHHHHHHHHHHHHHccccEEEEEccHHccccHHHHHHHHHHHHHccccccEEEEcccccccHHHHHHHHHHHHHHHHccccccccccccccEEEEcccEEEEEEEcccccccHcccccccHHHHHHHHHHHHHccccccEEEEEEEcccccccccHHHHcccHHHHHHHHHHccccEEEEcccccccEEEcccccccEEEEEEcccccccccccccccEEEEEEEcccccEEEEEEEEEcccccccEEEEEEEEEEEEEcc
MTKRYTTIMFVLAHISDihlsyspsffelspkRIIGLVNWHFNRKKYFSKEVANLLINDILlhnvdhvsitgDIVNFTCNREIFTSTHWLrsignphdisivpgnhdayisgakeKSLHAWKDyitsdttcstgkklfpylrirnnialigcstaiatppfsangyfgqeQAHATSKLLRKANKKGFFRIImmhhppvldtsslyNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEKKLIPVVGIASAsqkvhsnkpqasynLFYIEKKNEYwtlegkrytlspdslsiqkdysdifyDTLVL
MTKRYTTIMFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHVSITGDIVNFTCNREIFTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFGQEQAHATSKLLRKANKKGFFRIIMMHhppvldtssLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEKKLIPVVGIASasqkvhsnkpqasynlFYIEKKNEYWTLEGKRytlspdslsiqkdysdifyDTLVL
MTKRYTTIMFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHVSITGDIVNFTCNREIFTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFGQEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEKKLIPVVGIASASQKVHSNKPQASYNLFYIEKKNEYWTLEGKRYTLSPDSLSIQKDYSDIFYDTLVL
******T**FVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHVSITGDIVNFTCNREIFTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFGQEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEKKLIPVVGIASASQKVHSNKPQASYNLFYIEKKNEYWTLEGKRYTLSPDSLSIQKDYSDIFYDTLVL
MTKRYTTIMFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHVSITGDIVNFTCNREIFTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFGQEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEKKLIPVVGIA********NKPQASYNLFYIEKKNEYWTLEGKRYTLSPDSLSIQKDYSDIFYDTLVL
***RYTTIMFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHVSITGDIVNFTCNREIFTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFGQEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEKKLIPVVGIASASQKVHSNKPQASYNLFYIEKKNEYWTLEGKRYTLSPDSLSIQKDYSDIFYDTLVL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxhhhhhhhhhhhhhhhhhhhhxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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SSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTKRYTTIMFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHVSITGDIVNFTCNREIFTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFGQEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEKKLIPVVGIASASQKVHSNKPQASYNLFYIEKKNEYWTLEGKRYTLSPDSLSIQKDYSDIFYDTLVL
MTKRYTTIMFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHVSITGDIVNFTCNREIFTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFGQEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEKKLIPVVGIASASQKVHSNKPQASYNLFYIEKKNEYWTLEGKRYTLSPDSLSIQKDYSDIFYDTLVL
MTKRYTTIMFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHVSITGDIVNFTCNREIFTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFGQEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEKKLIPVVGIASASQKVHSNKPQASYNLFYIEKKNEYWTLEGKRYTLSPDSLSIQKDYSDIFYDTLVL

Close Homologs Detected by BLAST or PSI-BLAST

Homolog within the Genome Detected by BLAST

Original result of BLAST against C. L. asiaticus genome

No hits with e-value below 0.05

Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations

Original result of PSI-BLAST first 2 iterations

IdentityAlignment graphLength Definition Round E-value
Target309 putative phosphoesterase protein [Candidatus Liberibact
315121809294 putative phosphoesterase protein [Candidatus Liberibact 1 1e-116
241205764302 metallophosphoesterase [Rhizobium leguminosarum bv. tri 1 6e-87
327193481306 putative phosphoesterase protein [Rhizobium etli CNPAF5 1 7e-86
190892804312 phosphoesterase [Rhizobium etli CIAT 652] Length = 312 1 2e-85
15966127300 hypothetical protein SMc02712 [Sinorhizobium meliloti 1 1 3e-84
116253249312 phosphoesterase [Rhizobium leguminosarum bv. viciae 384 1 4e-84
209550379302 metallophosphoesterase [Rhizobium leguminosarum bv. tri 1 1e-83
150397483300 metallophosphoesterase [Sinorhizobium medicae WSM419] L 1 9e-83
86358665312 putative phosphatase protein [Rhizobium etli CFN 42] Le 1 2e-82
325293623316 hypothetical protein AGROH133_07855 [Agrobacterium sp. 1 2e-82
>gi|315121809|ref|YP_004062298.1| putative phosphoesterase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 294 Back     alignment and organism information
 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 210/301 (69%), Positives = 242/301 (80%), Gaps = 7/301 (2%)

Query: 9   MFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHV 68
           MFVLAHISDIH+S   SF ELS KRIIGL NWHF RKKYFS  + +LL+NDIL HN++H+
Sbjct: 1   MFVLAHISDIHISCPLSFSELSLKRIIGLANWHFGRKKYFSHTMVDLLVNDILSHNINHL 60

Query: 69  SITGDIVNFTCNREIFTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSD 128
           +ITGDIVN T N+EI  + HWL++I NPHDISIV GNHDAY + +K+KSL AW DYI  D
Sbjct: 61  AITGDIVNMTTNQEISEAIHWLKNIVNPHDISIVLGNHDAYTNSSKKKSLRAWSDYIAGD 120

Query: 129 TTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFGQEQAHATSKLLRKANKKGFF 188
           T     KK FPYLR+RNNIALIGCSTAIATPPFSANGYFGQEQ H TSKLLRKA K+G F
Sbjct: 121 TP-PIEKKQFPYLRVRNNIALIGCSTAIATPPFSANGYFGQEQDHDTSKLLRKAKKEGLF 179

Query: 189 RIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEKKLIPV 248
           R++MMHHPP LDTS++YNRMFGI+RF+ MI  EGA+L+LHGHTH NSLHWI   KKLIPV
Sbjct: 180 RVVMMHHPPFLDTSTIYNRMFGIKRFKDMILREGAELMLHGHTHRNSLHWIDGAKKLIPV 239

Query: 249 VGIASASQKVHSNKPQASYNLFYIEKKNEYWTLEGKRYTLSPDSLSIQKDYSDIFYDTLV 308
           VGIA+A       K  ASYNLFYIEKK++ WTL GKRYTLS DS  +QK+ S+IF +TL 
Sbjct: 240 VGIAAACH-----KKNASYNLFYIEKKHDCWTLRGKRYTLS-DSNGVQKNCSNIFNETLS 293

Query: 309 L 309
           L
Sbjct: 294 L 294



Species: Candidatus Liberibacter solanacearum
Genus: Candidatus Liberibacter
Family: Rhizobiaceae
Order: Rhizobiales
Class: Alphaproteobacteria
Phylum: Proteobacteria
Superkingdom: Bacteria
>gi|241205764|ref|YP_002976860.1| metallophosphoesterase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 302 Back     alignment and organism information
>gi|327193481|gb|EGE60376.1| putative phosphoesterase protein [Rhizobium etli CNPAF512] Length = 306 Back     alignment and organism information
>gi|190892804|ref|YP_001979346.1| phosphoesterase [Rhizobium etli CIAT 652] Length = 312 Back     alignment and organism information
>gi|15966127|ref|NP_386480.1| hypothetical protein SMc02712 [Sinorhizobium meliloti 1021] Length = 300 Back     alignment and organism information
>gi|116253249|ref|YP_769087.1| phosphoesterase [Rhizobium leguminosarum bv. viciae 3841] Length = 312 Back     alignment and organism information
>gi|209550379|ref|YP_002282296.1| metallophosphoesterase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 302 Back     alignment and organism information
>gi|150397483|ref|YP_001327950.1| metallophosphoesterase [Sinorhizobium medicae WSM419] Length = 300 Back     alignment and organism information
>gi|86358665|ref|YP_470557.1| putative phosphatase protein [Rhizobium etli CFN 42] Length = 312 Back     alignment and organism information
>gi|325293623|ref|YP_004279487.1| hypothetical protein AGROH133_07855 [Agrobacterium sp. H13-3] Length = 316 Back     alignment and organism information

Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch

Conserved Domains in CDD Database Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Original result of RPS-BLASTagainst CDD database part II

IdentityAlignment graphLength Definition E-value
Target309 putative phosphoesterase protein [Candidatus Liberibact
pfam00149186 pfam00149, Metallophos, Calcineurin-like phosphoesteras 5e-08
cd07402240 cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and rela 2e-06
cd07385223 cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related 6e-04
cd07400144 cd07400, MPP_YydB, Bacillus subtilis YydB and related p 2e-07
cd07400144 cd07400, MPP_YydB, Bacillus subtilis YydB and related p 2e-05
cd00838131 cd00838, MPP_superfamily, metallophosphatase superfamil 3e-05
COG1409301 COG1409, Icc, Predicted phosphohydrolases [General func 4e-20
>gnl|CDD|143917 pfam00149, Metallophos, Calcineurin-like phosphoesterase Back     alignment and domain information
>gnl|CDD|163645 cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|163628 cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain Back     alignment and domain information
>gnl|CDD|163643 cd07400, MPP_YydB, Bacillus subtilis YydB and related proteins, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|163643 cd07400, MPP_YydB, Bacillus subtilis YydB and related proteins, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|31599 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] Back     alignment and domain information

Conserved Domains in CDD Database Detected by HHsearch

Original result of HHsearch against CDD database

IdentityAlignment graphLength Definition Probability
Target 309 putative phosphoesterase protein [Candidatus Liberibact
PRK11148275 cyclic 3',5'-adenosine monophosphate phosphodiesterase; 100.0
COG1409301 Icc Predicted phosphohydrolases [General function predi 99.96
PRK10966402 exonuclease subunit SbcD; Provisional 99.89
KOG3770577 consensus 99.85
COG0420 390 SbcD DNA repair exonuclease [DNA replication, recombina 99.84
KOG1432379 consensus 99.76
COG2129226 Predicted phosphoesterases, related to the Icc protein 99.75
PRK09453183 phosphodiesterase; Provisional 99.59
TIGR00040170 yfcE phosphodiesterase, MJ0936 family; InterPro: IPR000 99.41
COG0622172 Predicted phosphoesterase [General function prediction 99.4
PRK09418 780 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiestera 99.31
KOG2310 646 consensus 99.23
TIGR00583424 mre11 DNA repair protein (mre11); InterPro: IPR003701 M 99.21
PRK09419 1260 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiestera 99.17
PRK11907 810 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiestera 99.05
TIGR01390 634 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodieste 98.46
PRK11340270 phosphodiesterase YaeI; Provisional 99.9
pfam00149186 Metallophos Calcineurin-like phosphoesterase. This fami 99.82
COG1768230 Predicted phosphohydrolase [General function prediction 99.62
TIGR01854241 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase; Inter 99.41
COG2908237 Uncharacterized protein conserved in bacteria [Function 99.37
PRK04036497 DNA polymerase II small subunit; Validated 99.3
PRK09558 551 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase p 99.2
COG0737 517 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and 99.12
PRK09419 1260 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiestera 98.89
COG1311481 HYS2 Archaeal DNA polymerase II, small subunit/DNA poly 98.88
COG4186186 Predicted phosphoesterase or phosphohydrolase [General 98.88
TIGR01530 550 nadN NAD nucleotidase; InterPro: IPR006420 This family 97.84
KOG4419 602 consensus 97.48
pfam09587237 PGA_cap Bacterial capsule synthesis protein PGA_cap. Th 92.9
KOG1378452 consensus 99.76
KOG2679336 consensus 99.38
pfam09423450 PhoD PhoD-like phosphatase. 98.92
KOG3947305 consensus 98.3
KOG2863 456 consensus 97.44
COG3540522 PhoD Phosphodiesterase/alkaline phosphatase D [Inorgani 97.43
COG5555392 Cytolysin, a secreted calcineurin-like phosphatase [Cel 96.82
smart00854239 PGA_cap Bacterial capsule synthesis protein PGA_cap. Th 95.08
COG1692266 Calcineurin-like phosphoesterase [General function pred 92.72
PRK10425258 DNase TatD; Provisional 91.99
PRK09982142 universal stress protein UspD; Provisional 91.78
COG1408284 Predicted phosphohydrolases [General function predictio 99.66
PRK05340240 UDP-2,3-diacylglucosamine hydrolase; Provisional 99.57
TIGR00619275 sbcd nuclease SbcCD, D subunit; InterPro: IPR004593 All 99.51
KOG3662410 consensus 98.66
COG1407235 Predicted ICC-like phosphoesterases [General function p 98.5
PHA02239235 putative protein phosphatase 98.5
PRK09968218 serine/threonine-specific protein phosphatase 2; Provis 98.24
PRK13625245 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional 98.19
PRK11439218 pphA serine/threonine protein phosphatase 1; Provisiona 98.09
PRK00166275 apaH diadenosine tetraphosphatase; Reviewed 98.04
TIGR00024243 SbcD_rel_arch phosphoesterase, putative; InterPro: IPR0 98.03
pfam04042205 DNA_pol_E_B DNA polymerase alpha/epsilon subunit B. Thi 97.58
PRK09420 578 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodie 98.52
cd00144269 PP2Ac Protein phosphatase 2A homologues, catalytic doma 97.19
smart00156271 PP2Ac Protein phosphatase 2A homologues, catalytic doma 96.4
PTZ00244294 serine/threonine-protein phosphatase PP1; Provisional 96.03
KOG0374331 consensus 95.39
KOG3325183 consensus 96.82
PTZ00239303 serine/threonine protein phosphatase 2A; Provisional 95.98
pfam06874 641 FBPase_2 Firmicute fructose-1,6-bisphosphatase. This fa 95.25
TIGR00668280 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical); 94.62
COG3855 648 Fbp Uncharacterized protein conserved in bacteria [Carb 91.43
KOG0371319 consensus 91.02
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional Back     alignment and domain information
>COG1409 Icc Predicted phosphohydrolases [General function prediction only] Back     alignment and domain information
>PRK10966 exonuclease subunit SbcD; Provisional Back     alignment and domain information
>KOG3770 consensus Back     alignment and domain information
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] Back     alignment and domain information
>KOG1432 consensus Back     alignment and domain information
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] Back     alignment and domain information
>PRK09453 phosphodiesterase; Provisional Back     alignment and domain information
>TIGR00040 yfcE phosphodiesterase, MJ0936 family; InterPro: IPR000979 Members of this largely uncharacterised family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterised archaeal putative phosphoesterases Back     alignment and domain information
>COG0622 Predicted phosphoesterase [General function prediction only] Back     alignment and domain information
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed Back     alignment and domain information
>KOG2310 consensus Back     alignment and domain information
>TIGR00583 mre11 DNA repair protein (mre11); InterPro: IPR003701 Mre11 and Rad50 are two proteins required for DNA repair and meiosis-specific double-strand break formation in Saccharomyces cerevisiae Back     alignment and domain information
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed Back     alignment and domain information
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed Back     alignment and domain information
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase; InterPro: IPR006294 These sequences represent 2',3'-cyclic-nucleotide 2'-phosphodiesterase; it is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria Back     alignment and domain information
>PRK11340 phosphodiesterase YaeI; Provisional Back     alignment and domain information
>pfam00149 Metallophos Calcineurin-like phosphoesterase Back     alignment and domain information
>COG1768 Predicted phosphohydrolase [General function prediction only] Back     alignment and domain information
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase; InterPro: IPR010138 This entry represents LpxH, or UDP-2,3-diacylglucosamine hydrolase (or pyrophosphatase), which is an essential enzyme in Escherichia coli that catalyses the fourth step in lipid A biosynthesis Back     alignment and domain information
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK04036 DNA polymerase II small subunit; Validated Back     alignment and domain information
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed Back     alignment and domain information
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed Back     alignment and domain information
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] Back     alignment and domain information
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] Back     alignment and domain information
>TIGR01530 nadN NAD nucleotidase; InterPro: IPR006420 This family describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria Back     alignment and domain information
>KOG4419 consensus Back     alignment and domain information
>pfam09587 PGA_cap Bacterial capsule synthesis protein PGA_cap Back     alignment and domain information
>KOG1378 consensus Back     alignment and domain information
>KOG2679 consensus Back     alignment and domain information
>pfam09423 PhoD PhoD-like phosphatase Back     alignment and domain information
>KOG3947 consensus Back     alignment and domain information
>KOG2863 consensus Back     alignment and domain information
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] Back     alignment and domain information
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap Back     alignment and domain information
>COG1692 Calcineurin-like phosphoesterase [General function prediction only] Back     alignment and domain information
>PRK10425 DNase TatD; Provisional Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>COG1408 Predicted phosphohydrolases [General function prediction only] Back     alignment and domain information
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional Back     alignment and domain information
>TIGR00619 sbcd nuclease SbcCD, D subunit; InterPro: IPR004593 All proteins in this family for which functions are known are double-stranded DNA exonuclease (as part of a complex with SbcC homologs) Back     alignment and domain information
>KOG3662 consensus Back     alignment and domain information
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only] Back     alignment and domain information
>PHA02239 putative protein phosphatase Back     alignment and domain information
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional Back     alignment and domain information
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional Back     alignment and domain information
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional Back     alignment and domain information
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed Back     alignment and domain information
>TIGR00024 SbcD_rel_arch phosphoesterase, putative; InterPro: IPR004376 Members of this uncharacterised family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11 Back     alignment and domain information
>pfam04042 DNA_pol_E_B DNA polymerase alpha/epsilon subunit B Back     alignment and domain information
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed Back     alignment and domain information
>cd00144 PP2Ac Protein phosphatase 2A homologues, catalytic domain Back     alignment and domain information
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain Back     alignment and domain information
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional Back     alignment and domain information
>KOG0374 consensus Back     alignment and domain information
>KOG3325 consensus Back     alignment and domain information
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional Back     alignment and domain information
>pfam06874 FBPase_2 Firmicute fructose-1,6-bisphosphatase Back     alignment and domain information
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical); InterPro: IPR004617 Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions Back     alignment and domain information
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0371 consensus Back     alignment and domain information

Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch

Homologous Structures Detected by PSI-BLAST against Nonredundant Database

Original result of PSI-BLAST

IdentityAlignment graphLength Definition E-value
Target309 putative phosphoesterase protein [Candidatus Liberibact
3ib7_A330 Crystal Structure Of Full Length Rv0805 Length = 33 4e-21
2hy1_A280 Crystal Structure Of Rv0805 Length = 280 1e-20
2hyo_A280 Crystal Structure Of Rv0805 N97a Mutant Length = 28 7e-20
2hyp_A280 Crystal Structure Of Rv0805 D66a Mutant Length = 28 7e-20
1war_A310 Recombinant Human Purple Acid Phosphatase Expressed 2e-09
2bq8_X304 Crystal Structure Of Human Purple Acid Phosphatase 2e-09
1qhw_A327 Purple Acid Phosphatase From Rat Bone Length = 327 4e-09
1ute_A313 Pig Purple Acid Phosphatase Complexed With Phosphat 2e-08
3dsc_A349 Crystal Structure Of P. Furiosus Mre11 Dna Synaptic 5e-08
1ii7_A333 Crystal Structure Of P. Furiosus Mre11 With Mangane 8e-08
3dsd_A349 Crystal Structure Of P. Furiosus Mre11-H85s Bound T 2e-07
1s8e_A333 Crystal Structure Of Mre11-3 Length = 333 3e-06
2dxl_A274 Glycerophosphodiesterase From Enterobacter Aerogene 4e-15
2zo9_B274 Malonate-Bound Structure Of The Glycerophosphodiest 4e-15
2q8u_A336 Crystal Structure Of Mre11 From Thermotoga Maritima 2e-09
3qg5_C379 The Mre11:rad50 Complex Forms An Atp Dependent Mole 3e-09
2xmo_A443 The Crystal Structure Of Lmo2642 Length = 443 7e-14
1kbp_A432 Kidney Bean Purple Acid Phosphatase Length = 432 2e-09
1qfc_A306 Structure Of Rat Purple Acid Phosphatase Length = 3 3e-09
2qfp_A424 Crystal Structure Of Red Kidney Bean Purple Acid Ph 3e-09
1xzw_A426 Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL 5e-07
>gi|260100110|pdb|3IB7|A Chain A, Crystal Structure Of Full Length Rv0805 Length = 330 Back     alignment and structure 
 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 77/281 (27%), Gaps = 52/281 (18%)

Query: 10  FVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILL--HNVDH 67
           +VL HISD HL                +           + +    L+  +       D 
Sbjct: 26  YVLLHISDTHL----------------IGGDRRLYGAVDADDRLGELLEQLNQSGLRPDA 69

Query: 68  VSITGDIVNFTCNREIFTSTHWLRSIGNPHD--ISIVPGNHDAYISGAKEKSLHAWKDYI 125
           +  TGD+ +             +          +  V GNHD               +  
Sbjct: 70  IVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDR------------AELR 117

Query: 126 TSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFGQEQAHATSKLLRKANKK 185
                 +        + + + + +I   T++   P   +G     Q    ++ L      
Sbjct: 118 KFLLDEAPSMAPLDRVCMIDGLRIIVLDTSV---PGHHHGEIRASQLGWLAEELATPAPD 174

Query: 186 GFFRIIMMHHPPVLDTSSLYNRMF--GIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEK 243
           G   I+ +HHPP+     +   +         +++       IL GH H ++        
Sbjct: 175 GT--ILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVG-- 230

Query: 244 KLIPVVGIASASQK---------VHSNKPQASYNLFYIEKK 275
             IPV   ++                       NL ++   
Sbjct: 231 --IPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPD 269
>gi|122920483|pdb|2HY1|A Chain A, Crystal Structure Of Rv0805 Length = 280 Back     alignment and structure
>gi|122920485|pdb|2HYO|A Chain A, Crystal Structure Of Rv0805 N97a Mutant Length = 280 Back     alignment and structure
>gi|122920487|pdb|2HYP|A Chain A, Crystal Structure Of Rv0805 D66a Mutant Length = 280 Back     alignment and structure
>gi|157880621|pdb|1WAR|A Chain A, Recombinant Human Purple Acid Phosphatase Expressed In Pichia Pastoris Length = 310 Back     alignment and structure
>gi|82408131|pdb|2BQ8|X Chain X, Crystal Structure Of Human Purple Acid Phosphatase With An Inhibitory Conformation Of The Repression Loop Length = 304 Back     alignment and structure
gi|6137538|pdb|1QHW|A Chain A, Purple Acid Phosphatase From Rat Bone Length = 327 Back     alignment and structure
>gi|6137386|pdb|1UTE|A Chain A, Pig Purple Acid Phosphatase Complexed With Phosphate Length = 313 Back     alignment and structure
>gi|209447464|pdb|3DSC|A Chain A, Crystal Structure Of P. Furiosus Mre11 Dna Synaptic Complex Length = 349 Back     alignment and structure
>gi|14488686|pdb|1II7|A Chain A, Crystal Structure Of P. Furiosus Mre11 With Manganese And Damp Length = 333 Back     alignment and structure
>gi|209447466|pdb|3DSD|A Chain A, Crystal Structure Of P. Furiosus Mre11-H85s Bound To A Branched Dna And Manganese Length = 349 Back     alignment and structure
>gi|52695447|pdb|1S8E|A Chain A, Crystal Structure Of Mre11-3 Length = 333 Back     alignment and structure
>gi|149241216|pdb|2DXL|A Chain A, Glycerophosphodiesterase From Enterobacter Aerogenes Length = 274 Back     alignment and structure
>gi|209156407|pdb|2ZO9|B Chain B, Malonate-Bound Structure Of The Glycerophosphodiesterase From Enterobacter Aerogenes (Gpdq) And Characterization Of The Native Fe2+ Metal Ion Preference Length = 274 Back     alignment and structure
>gi|151567968|pdb|2Q8U|A Chain A, Crystal Structure Of Mre11 From Thermotoga Maritima Msb8 (Tm1635) At 2.20 A Resolution Length = 336 Back     alignment and structure
>gi|329666215|pdb|3QG5|C Chain C, The Mre11:rad50 Complex Forms An Atp Dependent Molecular Clamp In Dna Double-Strand Break Repair Length = 379 Back     alignment and structure
>gi|323714329|pdb|2XMO|A Chain A, The Crystal Structure Of Lmo2642 Length = 443 Back     alignment and structure
>gi|1827635|pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 Back     alignment and structure
>gi|7767180|pdb|1QFC|A Chain A, Structure Of Rat Purple Acid Phosphatase Length = 306 Back     alignment and structure
>gi|209447303|pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 Back     alignment and structure
>gi|60594488|pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 Back     alignment and structure

Homologous Structures in PDB70 Database Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

IdentityAlignment graphLength Definition E-value
Target309 putative phosphoesterase protein [Candidatus Liberibact
3ib7_A330 ICC protein; metallophosphoesterase, alpha-beta fold, s 7e-11
1ii7_A333 MRE11 nuclease; RAD50, DNA double-strand break repair, 6e-10
2q8u_A336 Exonuclease, putative; TM1635, structural genomics, joi 2e-09
2nxf_A322 Putative dimetal phosphatase; dinuclear metal center ph 5e-08
3d03_A274 Phosphohydrolase; glycerophosphodiesterase, metallohydr 1e-07
3c9f_A 557 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protei 3e-04
2yvt_A260 Hypothetical protein AQ_1956; structural genomics, unkn 8e-04
1uf3_A228 Hypothetical protein TT1561; metallo-dependent phosphat 4e-09
3ck2_A176 Conserved uncharacterized protein (predicted phosphoest 0.002
2z72_A342 Protein-tyrosine-phosphatase; cold-active enzyme, psych 0.003
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, hydrolase; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 Back     alignment and structure
 Score = 63.0 bits (152), Expect = 7e-11
 Identities = 43/252 (17%), Positives = 73/252 (28%), Gaps = 43/252 (17%)

Query: 10  FVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDI--LLHNVDH 67
           +VL HISD HL           +R+ G V+         + +    L+  +       D 
Sbjct: 26  YVLLHISDTHLIGGD-------RRLYGAVD---------ADDRLGELLEQLNQSGLRPDA 69

Query: 68  VSITGDIVNF--TCNREIFTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYI 125
           +  TGD+ +                 +     ++  V GNHD      K     A     
Sbjct: 70  IVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRAELRKFLLDEAP-SMA 128

Query: 126 TSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFGQEQAHATSKLLRKANKK 185
             D  C         L                + P   +G     Q    ++ L      
Sbjct: 129 PLDRVCMIDGLRIIVLDT--------------SVPGHHHGEIRASQLGWLAEELATPAPD 174

Query: 186 GFFRIIMMHHPPVLDTSSLYNRM--FGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEK 243
           G    + +HHPP+     +   +         +++       IL GH H ++        
Sbjct: 175 GTI--LALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVG-- 230

Query: 244 KLIPVVGIASAS 255
             IPV   ++  
Sbjct: 231 --IPVSVASATC 240
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A Length = 333 Back     alignment and structure
>2q8u_A Exonuclease, putative; TM1635, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.20A {Thermotoga maritima MSB8} Length = 336 Back     alignment and structure
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 Back     alignment and structure
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 Back     alignment and structure
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein structure initiative, PSI-2; 1.90A {Candida albicans SC5314} SCOP: d.114.1.1 d.159.1.2 Length = 557 Back     alignment and structure
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national project on protein structural and functional analyses; 1.60A {Aquifex aeolicus VF5} SCOP: d.159.1.6 Length = 260 Back     alignment and structure
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 Back     alignment and structure
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae TIGR4} SCOP: d.159.1.7 Length = 176 Back     alignment and structure
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A Length = 342 Back     alignment and structure

Homologous Structures in PDB70 Database Detected by HHsearch

Original result of HHsearch against PDB70 database

IdentityAlignment graphLength Definition Probability
Target309 putative phosphoesterase protein [Candidatus Liberibact
3ib7_A330 ICC protein; metallophosphoesterase, alpha-beta fold, s 100.0
3d03_A274 Phosphohydrolase; glycerophosphodiesterase, metallohydr 100.0
2nxf_A322 Putative dimetal phosphatase; dinuclear metal center ph 99.96
2q8u_A336 Exonuclease, putative; structural genomics, joint cente 99.93
1ii7_A333 MRE11 nuclease; RAD50, DNA double-strand break repair, 99.9
2yvt_A260 Hypothetical protein AQ_1956; structural genomics, unkn 99.89
1uf3_A228 Hypothetical protein TT1561; metallo-dependent phosphat 99.89
1ute_A313 Protein (II purple acid phosphatase); tartrate resistan 99.84
1nnw_A252 Hypothetical protein; structural genomics, PSI, protein 99.83
1s3l_A190 Hypothetical protein MJ0936; phosphodiesterase, nucleas 99.72
2a22_A215 Vacuolar protein sorting 29; alpha-beta-BETA-alpha sand 99.7
1z2w_A192 Vacuolar protein sorting 29; VPS29, retromer, phosphata 99.69
1su1_A208 Hypothetical protein YFCE; structural genomics, phospho 99.58
3ck2_A176 Conserved uncharacterized protein (predicted phosphoest 99.56
2kkn_A178 Uncharacterized protein; protein phosphatase 2A homolog 99.52
3gve_A341 YFKN protein; alpha-beta-BETA-alpha sandwich, structura 99.32
3jyf_A339 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleo 99.27
3e0j_A476 DNA polymerase subunit delta-2; DNA polymerase delta, P 98.45
1xzw_A426 Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2 99.88
2qfp_A424 Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; H 99.86
2z1a_A 552 5'-nucleotidase; metal-binding, nucleotide-binding, hyd 99.2
3ive_A 509 Nucleotidase; structural genomics, PSI-2, protein struc 99.19
1xm7_A195 Hypothetical protein AQ_1665; structural genomics, prot 99.17
1hp1_A 516 5'-nucleotidase; metallophosphatase, dinuclear, metallo 99.16
3c9f_A 557 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protei 99.08
2wdc_A 562 SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydr 98.92
1g5b_A221 Serine/threonine protein phosphatase; bacteriophage lam 98.71
2z72_A342 Protein-tyrosine-phosphatase; cold-active enzyme, psych 98.49
2qjc_A262 Diadenosine tetraphosphatase, putative; putative diaden 98.48
2dfj_A280 Diadenosinetetraphosphatase; helices and strands mixtur 97.88
2ie4_C309 PP2A-alpha;, serine/threonine-protein phosphatase 2A ca 97.04
3h63_A315 Serine/threonine-protein phosphatase 5; metalloenzyme, 96.07
3icf_A335 PPT, serine/threonine-protein phosphatase T; iron, meta 95.33
3flo_A460 DNA polymerase alpha subunit B; protein-protein complex 97.74
1wao_1477 Serine/threonine protein phosphatase 5; hydrolase, prot 95.8
1aui_A 521 Calcineurin, serine/threonine phosphatase 2B; hydrolase 94.95
3e7a_A299 PP-1A, serine/threonine-protein phosphatase PP1-alpha c 94.72
1fjm_A330 Protein serine/threonine phosphatase-1 (alpha isoform, 93.96
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, hydrolase; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Back     alignment and structure
Probab=100.00  E-value=1.3e-33  Score=238.61  Aligned_cols=232  Identities=16%  Similarity=0.196  Sum_probs=171.4

Q ss_pred             EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHC--CCCEEEECCCCCCCCCHHHHHHHH
Q ss_conf             788994111427885410002221000121000001233089999999999626--997999937444489989999999
Q gi|255764495|r   10 FVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLH--NVDHVSITGDIVNFTCNREIFTST   87 (309)
Q Consensus        10 ~ri~hlSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~--~pD~vvitGDl~~~~~~~~~~~~~   87 (309)
                      ++|+||||+||+......                .......+.|+++++.|++.  +||+||++|||++.|.+++|+.+.
T Consensus        26 ~~i~hiSD~Hl~~~~~~~----------------~~~~~~~~~l~~~l~~i~~~~~~pD~vvitGDl~~~g~~~~y~~~~   89 (330)
T 3ib7_A           26 YVLLHISDTHLIGGDRRL----------------YGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLR   89 (330)
T ss_dssp             EEEEEECCCCBCSSSCCB----------------TTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHH
T ss_pred             EEEEEECCCCCCCCCCCC----------------CCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHH
T ss_conf             899997888708987631----------------2574999999999999982298999999898778999999999999


Q ss_pred             HHHHHHC--CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCC
Q ss_conf             9998618--99718999458842222035676643245431344444555621279971987999832888888755476
Q gi|255764495|r   88 HWLRSIG--NPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANG  165 (309)
Q Consensus        88 ~~~~~l~--~~~~v~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~s~~~~~~~~~~g  165 (309)
                      ++++.+.  .+.|+++|+||||....         +..++....   .......+....+++.+++|||....   ...|
T Consensus        90 ~~l~~~~~~~~~pv~~v~GNHD~~~~---------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ldt~~~~---~~~G  154 (330)
T 3ib7_A           90 GLVEPFAAQLGAELVWVMGNHDDRAE---------LRKFLLDEA---PSMAPLDRVCMIDGLRIIVLDTSVPG---HHHG  154 (330)
T ss_dssp             HHHHHHHHHHTCEEEECCCTTSCHHH---------HHHHHHCCC---CCCSCCCEEEEETTEEEEECCCCCTT---CCSB
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCHHH---------HHHHHCCCC---CCCCCCEEEEEECCCEEEECCCCCCC---CCCC
T ss_conf             99999875249977995787764455---------544310136---66676304787078326643666678---7688


Q ss_pred             EECHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC--CCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCC
Q ss_conf             0089999999999852433697089998376888764311--01279789999998749819999876753247871699
Q gi|255764495|r  166 YFGQEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLY--NRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEK  243 (309)
Q Consensus       166 ~~~~~q~~~l~~~L~~~~~~~~~~iv~~Hhpp~~~~~~~~--~~~~~~~~l~~~l~~~~v~lvl~GH~H~~~~~~~~~~~  243 (309)
                      .++++|++||++.|++.+.  ..+|+++||||......+.  ..+.+++.+.+++++++++++||||+|.+....+.|  
T Consensus       155 ~~~~~ql~wL~~~L~~~~~--~~~iv~~HHpp~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~~~~~~~~G--  230 (330)
T 3ib7_A          155 EIRASQLGWLAEELATPAP--DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVG--  230 (330)
T ss_dssp             CCCHHHHHHHHHHTTSCCT--TCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEEETT--
T ss_pred             CCCHHHHHHHHHHHHHCCC--CCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCEEEECC--
T ss_conf             5599999999998864778--876999816985677753344334447999999974698199977788049379999--


Q ss_pred             CCEEEEEECCCCCCCC---------CCCCCCCEEEEEEECCCCE
Q ss_conf             8689999576235778---------8887785489999538983
Q gi|255764495|r  244 KLIPVVGIASASQKVH---------SNKPQASYNLFYIEKKNEY  278 (309)
Q Consensus       244 ~~~~~~~~~s~~~~~~---------~~~~~~~y~li~i~~~~~~  278 (309)
                        ++++.+||++....         .....+||++|++.+++..
T Consensus       231 --i~~~~~pst~~~~~~~~~~~~~~~~~~~~g~~~i~~~~d~~v  272 (330)
T 3ib7_A          231 --IPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDTVV  272 (330)
T ss_dssp             --EEEEECCCSSCEECTTSCTTCCCEESCSCEEEEEEECSSCEE
T ss_pred             --EEEEEECCCHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEE
T ss_conf             --999996962532667778887555568997599999599779
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Back     alignment and structure
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Back     alignment and structure
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} Back     alignment and structure
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A Back     alignment and structure
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national project on protein structural and functional analyses; 1.60A {Aquifex aeolicus VF5} SCOP: d.159.1.6 Back     alignment and structure
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Back     alignment and structure
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase, metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Back     alignment and structure
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A Back     alignment and structure
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC structure funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A Back     alignment and structure
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 Back     alignment and structure
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 1w24_A 2r17_A Back     alignment and structure
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 Back     alignment and structure
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae TIGR4} SCOP: d.159.1.7 Back     alignment and structure
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} Back     alignment and structure
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} Back     alignment and structure
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} Back     alignment and structure
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Back     alignment and structure
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Back     alignment and structure
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus HB8} SCOP: d.114.1.1 d.159.1.2 Back     alignment and structure
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* Back     alignment and structure
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initiative, midwest center for structural genomics, PSI, MCSG; 2.40A {Aquifex aeolicus VF5} SCOP: d.159.1.8 Back     alignment and structure
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A Back     alignment and structure
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein structure initiative, PSI-2; 1.90A {Candida albicans SC5314} SCOP: d.114.1.1 d.159.1.2 Back     alignment and structure
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A Back     alignment and structure
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 Back     alignment and structure
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A Back     alignment and structure
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} Back     alignment and structure
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} Back     alignment and structure
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 2nym_C* 2nyl_C* Back     alignment and structure
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A Back     alignment and structure
>3icf_A PPT, serine/threonine-protein phosphatase T; iron, metalloprotein, structural genomics, PSI-2, protein structure initiative; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc-binding motif, DNA replication; HET: DNA; 2.50A {Saccharomyces cerevisiae} Back     alignment and structure
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Back     alignment and structure
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 PDB: 2p6b_A 1tco_A* 1mf8_A* 1m63_A* 2jog_A Back     alignment and structure
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha catalytic subunit; PP1:nodularin CO-carbohydrate metabolism, cell cycle, cell division; HET: X9A; 1.63A {Homo sapiens} PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* Back     alignment and structure
>1fjm_A Protein serine/threonine phosphatase-1 (alpha isoform, type 1); hydrolase, complex (hydrolase/toxin) complex; HET: ADD; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 Back     alignment and structure

Homologous Domains in SCOP and MMDB Database
Detected by RPS-BLAST and HHsearch

Homologous Domains in SCOP70 (Version1.75) Database Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

IdentityAlignment graphLength Definition E-value
Target 309 putative phosphoesterase protein [Candidatus Liberibact
d2nxfa1320 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog z 1e-08
d2hy1a1256 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphod 6e-08
d3d03a1271 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Ent 1e-07
d2yvta1257 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aq 1e-07
d1ii7a_333 d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [Tax 4e-07
d1uf3a_228 d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus the 2e-08
d1nnwa_251 d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Py 0.002
d3ck2a1173 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Str 0.003
>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: ADPRibase-Mn-like
domain: Uncharacterized C17orf48 homolog zgc:64213
species: Zebrafish (Danio rerio) [TaxId: 7955]

 Score = 54.0 bits (128), Expect = 1e-08
 Identities = 33/283 (11%), Positives = 66/283 (23%), Gaps = 61/283 (21%)

Query: 9   MFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANL--LINDILLHNVD 66
           +F    I+D+  +                 N+   R++Y+      L   +       V 
Sbjct: 3   VFTFGLIADVQYADIEDGE-----------NYLRTRRRYYRGSADLLRDAVLQWRRERVQ 51

Query: 67  HVSITGDIVN------FTCNREIFTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHA 120
            V   GDI++         +R + T    L +                +   +   S   
Sbjct: 52  CVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLN 111

Query: 121 WKDYITSDTTCSTGKKLFPYLRIRNN---------------------------------- 146
                 +DT                                                   
Sbjct: 112 SAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQ 171

Query: 147 -------IALIGCSTAIATPPFSANGYFGQEQAHATSKLLRKANKKGFFRIIMMHHPPVL 199
                  + L   S  +       NG F ++Q      +L  ++ K    +I  H P   
Sbjct: 172 HNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHP 231

Query: 200 DTSSLYNRMFGIQRFQKMIW-HEGADLILHGHTHLNSLHWIKN 241
             +      +  +    ++  H+     + GH H        +
Sbjct: 232 CAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSS 274
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 Back     information, alignment and structure
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 Back     information, alignment and structure
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 Back     information, alignment and structure
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 333 Back     information, alignment and structure
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 Back     information, alignment and structure
>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 251 Back     information, alignment and structure
>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} Length = 173 Back     information, alignment and structure

Homologous Domains in SCOP70 (Version 1.75) Database Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

IdentityAlignment graphLength Definition Probability
Target309 putative phosphoesterase protein [Candidatus Liberibact
d3d03a1271 Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [ 100.0
d2hy1a1256 Rv0805 cyclic nucleotide phosphodiesterase {Mycobacteri 100.0
d2nxfa1320 Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish ( 99.97
d2yvta1257 Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxI 99.93
d1ii7a_333 Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} 99.9
d1uf3a_228 Hypothetical protein TT1561 {Thermus thermophilus [TaxI 99.9
d1utea_302 Mammalian purple acid phosphatase {Pig (Sus scrofa) [Ta 99.88
d1nnwa_251 Hypothetical protein PF1291 {Archaeon Pyrococcus furios 99.82
d2a22a1193 Vacuolar protein sorting 29, VPS29 {Cryptosporidium par 99.73
d1z2wa1182 Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus 99.71
d1s3la_165 Putative phosphodiesterase MJ0936 {Methanococcus jannas 99.64
d3ck2a1173 Uncharacterized protein SP1879 {Streptococcus pneumonia 99.58
d1su1a_184 Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} 99.47
d3c9fa2322 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal 99.04
d2qfra2312 Plant purple acid phosphatase, catalytic domain {Kidney 99.91
d1usha2337 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal 99.4
d1xm7a_188 Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 99.3
d2z1aa2302 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal 99.15
d1t71a_281 Hypothetical protein MPN349 {Mycoplasma pneumoniae [Tax 90.62
d1g5ba_219 lambda ser/thr protein phosphatase {Bacteriophage lambd 98.75
d3c5wc1288 Protein phosphatase 2A catalytic subunit alpha isoform, 96.73
d1s95a_324 Serine/threonine protein phosphatase 5, PP5 {Human (Hom 96.18
d1auia_ 473 Protein phosphatase-2B (PP-2B, calcineurin A subunit) { 94.67
d1jk7a_294 Protein phosphatase-1 (PP-1) {Human (Homo sapiens), bet 94.53
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: GpdQ-like
domain: Glycerophosphodiesterase GpdQ
species: Enterobacter aerogenes [TaxId: 548]

Probab=100.00  E-value=5e-31  Score=219.98  Aligned_cols=230  Identities=18%  Similarity=0.166  Sum_probs=164.1

Q ss_pred             EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH--CCCCEEEECCCCCCCCCHHHHHHHH
Q ss_conf             78899411142788541000222100012100000123308999999999962--6997999937444489989999999
Q gi|255764495|r   10 FVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILL--HNVDHVSITGDIVNFTCNREIFTST   87 (309)
Q Consensus        10 ~ri~hlSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~--~~pD~vvitGDl~~~~~~~~~~~~~   87 (309)
                      -+|+||||+||+......                .......+.++.+++.+++  .+||+||++|||++.+.+++|+.+.
T Consensus         1 M~i~hiSD~Hl~~~~~~~----------------~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~~~~y~~~~   64 (271)
T d3d03a1           1 MLLAHISDTHFRSRGEKL----------------YGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVAR   64 (271)
T ss_dssp             CEEEEECCCCBCSTTCCB----------------TTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHH
T ss_pred             CEEEEEECCCCCCCCCCC----------------CCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHH
T ss_conf             989999157579886420----------------2676899999999999983589999999895467288422689999


Q ss_pred             HHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCEE
Q ss_conf             99986189971899945884222203567664324543134444455562127997198799983288888875547600
Q gi|255764495|r   88 HWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYF  167 (309)
Q Consensus        88 ~~~~~l~~~~~v~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~s~~~~~~~~~~g~~  167 (309)
                      ++++++  ++|+++|+||||....  ............      ........+....+++++++|||.....   ..+.+
T Consensus        65 ~~l~~l--~~p~~~i~GNHD~~~~--~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~ldt~~~~~---~~~~l  131 (271)
T d3d03a1          65 QILGSL--NYPLYLIPGNHDDKAL--FLEYLQPLCPQL------GSDANNMRCAVDDFATRLLFIDSSRAGT---SKGWL  131 (271)
T ss_dssp             HHHTTC--SSCEEEECCTTSCHHH--HHHHHGGGSGGG------CSCGGGCCEEECSSSSEEEECCCCCTTC---SSBCC
T ss_pred             HHHHCC--CCCEEEEECCCCCHHH--HHHHHHHHHHCC------CCCCCCCEEEEECCCEEEEECCCCCCCC---CCCEE
T ss_conf             987505--9989999368642678--888766654203------3345763379943874798425565898---76412


Q ss_pred             CHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC--CCCCCHHHHHHHHHHC-CCEEEEECCCCCCEEEEEECCCC
Q ss_conf             89999999999852433697089998376888764311--0127978999999874-98199998767532478716998
Q gi|255764495|r  168 GQEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLY--NRMFGIQRFQKMIWHE-GADLILHGHTHLNSLHWIKNEKK  244 (309)
Q Consensus       168 ~~~q~~~l~~~L~~~~~~~~~~iv~~Hhpp~~~~~~~~--~~~~~~~~l~~~l~~~-~v~lvl~GH~H~~~~~~~~~~~~  244 (309)
                      +++|++||++.|++.+.  ...++++||||......+.  ..+.+++++.++|+++ +|+++||||+|++....+.|   
T Consensus       132 ~~~ql~wL~~~L~~~~~--~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~~g---  206 (271)
T d3d03a1         132 TDETISWLEAQLFEGGD--KPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQYRQ---  206 (271)
T ss_dssp             CHHHHHHHHHHHHHHTT--SCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEETT---
T ss_pred             CHHHHHHHHHHHHHHCC--CEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHCEEECC---
T ss_conf             39999899998764136--4059995467535686544443433547899999734784799827756346059999---


Q ss_pred             CEEEEEECCCCCCCCCC---------CCCCCEEEEEEEC
Q ss_conf             68999957623577888---------8778548999953
Q gi|255764495|r  245 LIPVVGIASASQKVHSN---------KPQASYNLFYIEK  274 (309)
Q Consensus       245 ~~~~~~~~s~~~~~~~~---------~~~~~y~li~i~~  274 (309)
                       ++++.+||++......         -.+++|.+.....
T Consensus       207 -~~~~~~pst~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  244 (271)
T d3d03a1         207 -ALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQVG  244 (271)
T ss_dssp             -EEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEEEEET
T ss_pred             -EEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEEEEC
T ss_conf             -99998487415121577877755455898799999949
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Back     information, alignment and structure
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure