HHsearch alignment for GI: 255764495 and conserved domain: COG0420
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair].
Probab=99.84 E-value=4.2e-19 Score=144.50 Aligned_cols=245 Identities=18% Similarity=0.134 Sum_probs=128.7
Q ss_pred EEEEEEECCCCCC-CCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCH--HHHHHH
Q ss_conf 7889941114278-8541000222100012100000123308999999999962699799993744448998--999999
Q gi|255764495|r 10 FVLAHISDIHLSY-SPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHVSITGDIVNFTCN--REIFTS 86 (309)
Q Consensus 10 ~ri~hlSDlHlg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~pD~vvitGDl~~~~~~--~~~~~~ 86 (309)
T Consensus 1 mkilHtSD~HLG~~~~~~----------------~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~ 64 (390)
T COG0420 1 MKILHTSDWHLGSKQLNL----------------PSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLF 64 (390)
T ss_pred CEEEEECCCCCCCCCCCC----------------CCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHH
T ss_conf 907996003678433567----------------1358999999999999999706999998155578899998999999
Q ss_pred HHHHHHHCC-CCCEEEEECCCCCCCCCHHHHHHH---HHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCC-C
Q ss_conf 999986189-971899945884222203567664---32454313444445556212799719879998328888887-5
Q gi|255764495|r 87 THWLRSIGN-PHDISIVPGNHDAYISGAKEKSLH---AWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPP-F 161 (309)
Q Consensus 87 ~~~~~~l~~-~~~v~~v~GNHD~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~s~~~~~~-~ 161 (309)
T Consensus 65 ~~~l~~l~~~~Ipv~~I~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~-~~~~l~~~~~--~~~~~~ 138 (390)
T COG0420 65 LEALRRLKDAGIPVVVIAGNHDSPSRLSEASPLLLLNNLGLHGVVGR--LVHEIRPP-EIV-AAPWLIPGPD--PDVVFF 138 (390)
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHCCCCEEECCC--CCCCCCCC-CCC-CCEEEEECCC--CCEEEE
T ss_conf 99999875469828997278986012643352466751685020464--30012455-334-5439960377--650576
Q ss_pred CCCCEECHHHHHHH--HHHHHHCCCCCCEEEEEEECCCC--CCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEE
Q ss_conf 54760089999999--99985243369708999837688--876431101279789999998749819999876753247
Q gi|255764495|r 162 SANGYFGQEQAHAT--SKLLRKANKKGFFRIIMMHHPPV--LDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLH 237 (309)
Q Consensus 162 ~~~g~~~~~q~~~l--~~~L~~~~~~~~~~iv~~Hhpp~--~~~~~~~~~~~~~~~l~~~l~~~~v~lvl~GH~H~~~~~ 237 (309)
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~~H~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~YvALGHiH~~~~~ 216 (390)
T COG0420 139 LGLNGLEKEQFELLLHKGLLSALDPDDDPSILVLHQSIDALTSGAERDLAL-GTVD-LSLLPKGGFDYVALGHIHKRQVI 216 (390)
T ss_pred ECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCC-CCCC-CCCCCCCCCCEEECCCCCCCCEE
T ss_conf 123664177899987566665417656675663102121245677566521-3101-02266788556976888764000
Q ss_pred EEECCCCCEEEEEECCCC-CCCCCCCCCCCEEEEEEECCCCEEEEEE
Q ss_conf 871699868999957623-5778888778548999953898389999
Q gi|255764495|r 238 WIKNEKKLIPVVGIASAS-QKVHSNKPQASYNLFYIEKKNEYWTLEG 283 (309)
Q Consensus 238 ~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~y~li~i~~~~~~~~v~~ 283 (309)
T Consensus 217 ~~----~~~~i~y~GS~~~~~f~E~~~~k~~~~v~~~~~~-~~~~~~ 258 (390)
T COG0420 217 PK----EDPPIVYPGSPERYSFGEEGERKGVVLVEFSGGK-LWRFEE 258 (390)
T ss_pred CC----CCCEEEECCCCCEECHHHHCCCCCEEEEEEECCC-CEEEEC
T ss_conf 67----8870462898703140331665664899850796-115740