HHsearch alignment for GI: 255764495 and conserved domain: TIGR00024
>TIGR00024 SbcD_rel_arch phosphoesterase, putative; InterPro: IPR004376 Members of this uncharacterised family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of Escherichia coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal..
Probab=98.03 E-value=1e-05 Score=56.41 Aligned_cols=86 Identities=21% Similarity=0.340 Sum_probs=56.5
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCH----HHHHHHHHHHHHCCCCEEEECCCCCCCC---CHHHH
Q ss_conf 8899411142788541000222100012100000123308----9999999999626997999937444489---98999
Q gi|255764495|r 11 VLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSK----EVANLLINDILLHNVDHVSITGDIVNFT---CNREI 83 (309)
Q Consensus 11 ri~hlSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~i~~~~pD~vvitGDl~~~~---~~~~~ 83 (309)
T Consensus 16 ~~avIAD~HLGf~---------------~~~~~~G~~vP~~Q~~eii~r~~~I~e~yg~~~livaGDLKH~F~~~~P~~~ 80 (243)
T TIGR00024 16 DKAVIADLHLGFE---------------RYLDERGVAVPRLQVEEIIERVLSIVEKYGIEKLIVAGDLKHEFKKGLPLEW 80 (243)
T ss_pred CCEEEEEHHHCHH---------------HHHCCCCEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCH
T ss_conf 7058863000420---------------0005786143524389999998866655250515661011105889888228
Q ss_pred HHHH------HHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 9999------999861899718999458842222
Q gi|255764495|r 84 FTST------HWLRSIGNPHDISIVPGNHDAYIS 111 (309)
Q Consensus 84 ~~~~------~~~~~l~~~~~v~~v~GNHD~~~~ 111 (309)
T Consensus 81 ~~~reiirmmef~E~~~~yid~~~irGNHD~~i~ 114 (243)
T TIGR00024 81 KFVREIIRMMEFIEVVREYIDLILIRGNHDAYIA 114 (243)
T ss_pred HHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHH
T ss_conf 9999999998886410147899998067057899