HHsearch alignment for GI: 255764495 and conserved domain: TIGR00040

>TIGR00040 yfcE phosphodiesterase, MJ0936 family; InterPro: IPR000979 Members of this largely uncharacterised family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterised archaeal putative phosphoesterases. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown to act on model phosphodiesterase substrates; a divalent cation was required. The following uncharacterised proteins are members of the fsmily: Escherichia coli hypothetical protein yfcE; Bacillus subtilis hypothetical protein ysnB; Mycoplasma genitalium and Mycoplasma pneumoniae hypothetical protein MG207; and M. jannaschii hypothetical proteins MJ0623 and MJ0936. .
Probab=99.41  E-value=1e-11  Score=95.92  Aligned_cols=163  Identities=19%  Similarity=0.256  Sum_probs=97.7

Q ss_pred             EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHC-CCCEEEECCCCCCCCCHHHHHHHHH
Q ss_conf             788994111427885410002221000121000001233089999999999626-9979999374444899899999999
Q gi|255764495|r   10 FVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLH-NVDHVSITGDIVNFTCNREIFTSTH   88 (309)
Q Consensus        10 ~ri~hlSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~-~pD~vvitGDl~~~~~~~~~~~~~~   88 (309)
T Consensus         1 m~il~~SDtH~~----------------------------~~A~e~~~~~~~~~~~~D~viH~GD~~N~~~s~--~~-l~   49 (170)
T TIGR00040         1 MLILVISDTHIP----------------------------LRATELPVEAFDKESNVDLVIHAGDLTNSYKSP--FV-LK   49 (170)
T ss_pred             CEEEEEEECCCC----------------------------CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCH--HH-HH
T ss_conf             958999620897----------------------------533157999998751887999921432355787--89-99


Q ss_pred             HHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEC
Q ss_conf             99861899718999458842222035676643245431344444555621279971987999832888888755476008
Q gi|255764495|r   89 WLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFG  168 (309)
Q Consensus        89 ~~~~l~~~~~v~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~s~~~~~~~~~~g~~~  168 (309)
T Consensus        50 ~~~~~~--~~~~aV~GN~D~~~~---------------------------------------------------------   70 (170)
T TIGR00040        50 EFEDLA--AKVIAVRGNNDGKER---------------------------------------------------------   70 (170)
T ss_pred             HHHHCC--CCEEEEECCCCCCCC---------------------------------------------------------
T ss_conf             886313--858999678998200---------------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCEEE
Q ss_conf             99999999998524336970899983768887643110127978999999874981999987675324787169986899
Q gi|255764495|r  169 QEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEKKLIPV  248 (309)
Q Consensus       169 ~~q~~~l~~~L~~~~~~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~l~~~l~~~~v~lvl~GH~H~~~~~~~~~~~~~~~~  248 (309)
T Consensus        71 ---~~~~~~~~~~---~e~~~f~~~hg~~~~~~~~~g~---~~~~L~~~~~~~~~DVli~GHTH~~~~e~~~~----~l~  137 (170)
T TIGR00040        71 ---EELPEEEIFE---VEGIKFGLVHGDLVYPRGDLGH---WYLVLEYLAKELGVDVLIFGHTHIPVAEELRG----ILL  137 (170)
T ss_pred             ---CCCCHHHHHH---CCCEEEEEEECCEEEECCCCCH---HHHHHHHHHHHCCCEEEEECCCCEEEEEECCC----EEE
T ss_conf             ---0000344422---3880279985785642446771---13556767766284089988714000011276----888


Q ss_pred             EEECCCCCCCCCC-CCCCCEEEEEEECC
Q ss_conf             9957623577888-87785489999538
Q gi|255764495|r  249 VGIASASQKVHSN-KPQASYNLFYIEKK  275 (309)
Q Consensus       249 ~~~~s~~~~~~~~-~~~~~y~li~i~~~  275 (309)
T Consensus       138 ~NPGS~~~p~~~~~yt~~s~~~L~~~~~  165 (170)
T TIGR00040       138 INPGSLTGPRNGRKYTTPSYAILEVDKD  165 (170)
T ss_pred             EECCEEEECCCCCCCCCCEEEEEEECCE
T ss_conf             8188336425799624205899970860