HHsearch alignment for GI: 255764495 and conserved domain: TIGR00040
>TIGR00040 yfcE phosphodiesterase, MJ0936 family; InterPro: IPR000979 Members of this largely uncharacterised family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterised archaeal putative phosphoesterases. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown to act on model phosphodiesterase substrates; a divalent cation was required. The following uncharacterised proteins are members of the fsmily: Escherichia coli hypothetical protein yfcE; Bacillus subtilis hypothetical protein ysnB; Mycoplasma genitalium and Mycoplasma pneumoniae hypothetical protein MG207; and M. jannaschii hypothetical proteins MJ0623 and MJ0936. .
Probab=99.41 E-value=1e-11 Score=95.92 Aligned_cols=163 Identities=19% Similarity=0.256 Sum_probs=97.7
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHC-CCCEEEECCCCCCCCCHHHHHHHHH
Q ss_conf 788994111427885410002221000121000001233089999999999626-9979999374444899899999999
Q gi|255764495|r 10 FVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLH-NVDHVSITGDIVNFTCNREIFTSTH 88 (309)
Q Consensus 10 ~ri~hlSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~-~pD~vvitGDl~~~~~~~~~~~~~~ 88 (309)
T Consensus 1 m~il~~SDtH~~----------------------------~~A~e~~~~~~~~~~~~D~viH~GD~~N~~~s~--~~-l~ 49 (170)
T TIGR00040 1 MLILVISDTHIP----------------------------LRATELPVEAFDKESNVDLVIHAGDLTNSYKSP--FV-LK 49 (170)
T ss_pred CEEEEEEECCCC----------------------------CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCH--HH-HH
T ss_conf 958999620897----------------------------533157999998751887999921432355787--89-99
Q ss_pred HHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEC
Q ss_conf 99861899718999458842222035676643245431344444555621279971987999832888888755476008
Q gi|255764495|r 89 WLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSANGYFG 168 (309)
Q Consensus 89 ~~~~l~~~~~v~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~s~~~~~~~~~~g~~~ 168 (309)
T Consensus 50 ~~~~~~--~~~~aV~GN~D~~~~--------------------------------------------------------- 70 (170)
T TIGR00040 50 EFEDLA--AKVIAVRGNNDGKER--------------------------------------------------------- 70 (170)
T ss_pred HHHHCC--CCEEEEECCCCCCCC---------------------------------------------------------
T ss_conf 886313--858999678998200---------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCEEE
Q ss_conf 99999999998524336970899983768887643110127978999999874981999987675324787169986899
Q gi|255764495|r 169 QEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEKKLIPV 248 (309)
Q Consensus 169 ~~q~~~l~~~L~~~~~~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~l~~~l~~~~v~lvl~GH~H~~~~~~~~~~~~~~~~ 248 (309)
T Consensus 71 ---~~~~~~~~~~---~e~~~f~~~hg~~~~~~~~~g~---~~~~L~~~~~~~~~DVli~GHTH~~~~e~~~~----~l~ 137 (170)
T TIGR00040 71 ---EELPEEEIFE---VEGIKFGLVHGDLVYPRGDLGH---WYLVLEYLAKELGVDVLIFGHTHIPVAEELRG----ILL 137 (170)
T ss_pred ---CCCCHHHHHH---CCCEEEEEEECCEEEECCCCCH---HHHHHHHHHHHCCCEEEEECCCCEEEEEECCC----EEE
T ss_conf ---0000344422---3880279985785642446771---13556767766284089988714000011276----888
Q ss_pred EEECCCCCCCCCC-CCCCCEEEEEEECC
Q ss_conf 9957623577888-87785489999538
Q gi|255764495|r 249 VGIASASQKVHSN-KPQASYNLFYIEKK 275 (309)
Q Consensus 249 ~~~~s~~~~~~~~-~~~~~y~li~i~~~ 275 (309)
T Consensus 138 ~NPGS~~~p~~~~~yt~~s~~~L~~~~~ 165 (170)
T TIGR00040 138 INPGSLTGPRNGRKYTTPSYAILEVDKD 165 (170)
T ss_pred EECCEEEECCCCCCCCCCEEEEEEECCE
T ss_conf 8188336425799624205899970860