>TIGR00583 mre11 DNA repair protein (mre11); InterPro: IPR003701 Mre11 and Rad50 are two proteins required for DNA repair and meiosis-specific double-strand break formation in Saccharomyces cerevisiae. Mre11 by itself has 3' to 5' exonuclease activity that is increased when Mre11 is in a complex with Rad50 . These eukaryotic proteins contain one metallo-phosphoesterase domain followed by an Mre11 DNA-binding domain. S. cerevisiae Mre11 is required for DNA repair and meiosis-specific double-strand break (DSB) formation and has both 3' to 5' exonuclease activity (which increases when in complex with Rad50) and endonuclease activity. The N-terminal phosphoesterase domain is required for DSB repair, and the carboxyl-terminal dsDNA-binding domain is essential during meiosis for chromatin modification and DSB formation . Schizosaccharomyces pombe rad32 is required for repair of double strand breaks and recombination . For additional information please see . ; GO: 0004527 exonuclease activity, 0006259 DNA metabolic process.

Probab=99.21 E-value=6.9e-11 Score=90.46 Aligned_cols=236 Identities=17% Similarity=0.146 Sum_probs=119.8 Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH--HHHHH Q ss_conf 2788994111427885410002221000121000001233089999999999626997999937444489989--99999 Q gi|255764495|r 9 MFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHVSITGDIVNFTCNR--EIFTS 86 (309) Q Consensus 9 m~ri~hlSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~pD~vvitGDl~~~~~~~--~~~~~ 86 (309) T Consensus 3 tIrILv~tD~HvGY~E~~p~----------------~~~Ds~~tF~Evl~iA~~~~VDMvllgGDLFH~NkPSrk~lYqv 66 (424) T TIGR00583 3 TIRILVSTDNHVGYGENDPV----------------RGDDSWKTFEEVLQIAKEQDVDMVLLGGDLFHENKPSRKSLYQV 66 (424) T ss_pred EEEEEECCCCCCCCCCCCCC----------------CCCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCCCCHHHHHHH T ss_conf 06898424786475668875----------------57764125689999975089678985681642458407899999 Q ss_pred HHHHHHH----------------------------------CCCCCEEEEECCCCCCCCCHHHHHHHHHH----HHHCCC Q ss_conf 9999861----------------------------------89971899945884222203567664324----543134 Q gi|255764495|r 87 THWLRSI----------------------------------GNPHDISIVPGNHDAYISGAKEKSLHAWK----DYITSD 128 (309) Q Consensus 87 ~~~~~~l----------------------------------~~~~~v~~v~GNHD~~~~~~~~~~~~~~~----~~~~~~ 128 (309) T Consensus 67 l~~LR~~CLg~kPceLElLSDaS~~f~~~~f~~vNY~Dpn~Nv~iPvF~IhGNHDD~SGdg~l~aLDlL~~~GLvN~FGk 146 (424) T TIGR00583 67 LRSLRLYCLGDKPCELELLSDASVVFEQSAFGNVNYEDPNINVAIPVFSIHGNHDDPSGDGRLCALDLLHATGLVNYFGK 146 (424) T ss_pred HHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC T ss_conf 99998762686813211035324414882023004558874140454301266458888855576688876055623564 Q ss_pred CCCCCCCCCCEEEEECCC--EEEEEECCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCEEEEEEECCC---CCCCCC Q ss_conf 444455562127997198--799983288888875547600899999999998524336970899983768---887643 Q gi|255764495|r 129 TTCSTGKKLFPYLRIRNN--IALIGCSTAIATPPFSANGYFGQEQAHATSKLLRKANKKGFFRIIMMHHPP---VLDTSS 203 (309) Q Consensus 129 ~~~~~~~~~~~~~~~~~~--~~~i~l~s~~~~~~~~~~g~~~~~q~~~l~~~L~~~~~~~~~~iv~~Hhpp---~~~~~~ 203 (309) T Consensus 147 v~e~d~i~V~PiLLqKG~TkLALYGl~~vRDeRL~r~F---k~n~v~F~rP---~~~~~dWFNLl~lHQNhPrr~~Ht~T 220 (424) T TIGR00583 147 VPESDNIIVSPILLQKGETKLALYGLSNVRDERLFRTF---KDNKVKFLRP---NLRKEDWFNLLVLHQNHPRRAAHTST 220 (424) T ss_pred CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCEEEE---ECCCEEEEEC---CCCCCCCEEEEEEECCCCCCCCCCCC T ss_conf 54456048734432478724445410112110102012---1273588417---77768741000021588664557774 Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCC-----CCEEEEEECCCCCCC--CCCCCCCCEEEEEEE Q ss_conf 1101279789999998749819999876753247871699-----868999957623577--888877854899995 Q gi|255764495|r 204 LYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEK-----KLIPVVGIASASQKV--HSNKPQASYNLFYIE 273 (309) Q Consensus 204 ~~~~~~~~~~l~~~l~~~~v~lvl~GH~H~~~~~~~~~~~-----~~~~~~~~~s~~~~~--~~~~~~~~y~li~i~ 273 (309) T Consensus 221 G~--fL-PE---~~lpdF-~DlviWGHEHEC~~~~~~np~seavG~~F~vlQPGStvATSL~p~E~~pK~~~il~I~ 290 (424) T TIGR00583 221 GS--FL-PE---SFLPDF-LDLVIWGHEHECLPDPVYNPSSEAVGKGFDVLQPGSTVATSLTPGEALPKHVFILNIK 290 (424) T ss_pred CC--CC-CH---HHHHHH-HHHEEECCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCEEEEEEEC T ss_conf 24--26-13---420345-6351305114523488626630013787668738862110578436367447887402

HHsearch alignment for GI: 255764495 and conserved domain: TIGR00583