HHsearch alignment for GI: 255764495 and conserved domain: pfam09587
>pfam09587 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=92.90 E-value=0.68 Score=24.70 Aligned_cols=216 Identities=14% Similarity=0.064 Sum_probs=92.9
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEC--CCCCCCCCH----HHH-
Q ss_conf 8899411142788541000222100012100000123308999999999962699799993--744448998----999-
Q gi|255764495|r 11 VLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHVSIT--GDIVNFTCN----REI- 83 (309)
Q Consensus 11 ri~hlSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~pD~vvit--GDl~~~~~~----~~~- 83 (309)
T Consensus 1 tl~f~GDi~l~~~~~~~----------------~~~~d~~~~~~~v~~~l~--~aD~~i~NlE~~~~~~~~~~~~~~~f~ 62 (237)
T pfam09587 1 TLAFVGDVMLGRGLDQI----------------APPYDFDYPFADVKPLLR--AADLAIGNLETPITDSGEPYSGKPAFR 62 (237)
T ss_pred CEEEEEEECCCCCHHHH----------------HCCCCCHHHHHHHHHHHH--HCCEEEEEECCCCCCCCCCCCCCCEEE
T ss_conf 96998646168845665----------------104880788999999986--199869981136548898789981577
Q ss_pred --HHHHHHHHHHCCCCCEEEEECCCCCCCCC-HHHHHHHHHHHHHCCCC--CCCCCCCCCEEEEECCCEEEEEECCCCCC
Q ss_conf --99999998618997189994588422220-35676643245431344--44455562127997198799983288888
Q gi|255764495|r 84 --FTSTHWLRSIGNPHDISIVPGNHDAYISG-AKEKSLHAWKDYITSDT--TCSTGKKLFPYLRIRNNIALIGCSTAIAT 158 (309)
Q Consensus 84 --~~~~~~~~~l~~~~~v~~v~GNHD~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~l~s~~~~ 158 (309)
T Consensus 63 ~~~~~~~~L~~~--G~d~vslANNH~~D~G~~G~~~T~~~L~~~gi~~~G~g~~~~~a~~p~~~~~~g~kia~l~~t~~~ 140 (237)
T pfam09587 63 APPENAEALKAA--GFDVVSLANNHSLDYGEEGLLDTLDALDRAGIAHAGAGRNLEEARRPAILEVNGIRIAFLAYTYGT 140 (237)
T ss_pred CCHHHHHHHHHC--CCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEECCCEEEEEEEECCC
T ss_conf 999999999984--999999577643325779999999999987996058889946627808999799389999987587
Q ss_pred C----CCCCCCEECHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCC
Q ss_conf 8----755476008999999999985243369708999837688876431101279789999998749819999876753
Q gi|255764495|r 159 P----PFSANGYFGQEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLN 234 (309)
Q Consensus 159 ~----~~~~~g~~~~~q~~~l~~~L~~~~~~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~l~~~l~~~~v~lvl~GH~H~~ 234 (309)
T Consensus 141 ~~~~~~~~~~~-~~~~~~~~i~~~i~~~k~~~D~vIv~~HwG~E~~~----~p~~~q~~~a~~lidaGaDlIiGhHpHv~ 215 (237)
T pfam09587 141 NGWGAGPYRPG-VNPLDEEKIKADIRRAKKKADIVIVSLHWGVEYQY----EPTPEQRELAHALIDAGADLVIGHHPHVL 215 (237)
T ss_pred CCCCCCCCCCC-CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC----CCCHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 87567888875-57569999999999875079999998775667876----99999999999999779999991899878
Q ss_pred EEEEEECCCCCEEEEEECC
Q ss_conf 2478716998689999576
Q gi|255764495|r 235 SLHWIKNEKKLIPVVGIAS 253 (309)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~s 253 (309)
T Consensus 216 q~iE~y--~~~~I~YSLGN 232 (237)
T pfam09587 216 QPIEVY--KGKLIAYSLGN 232 (237)
T ss_pred CCEEEE--CCEEEEEECCC
T ss_conf 874999--99999996720