HHsearch results for GI: 255764495 and protein with PDBid: 1nnw_A
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.83 E-value=1.4e-20 Score=152.72 Aligned_cols=220 Identities=11% Similarity=0.057 Sum_probs=129.2
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHC-----CCCEEEECCCCCCCCCHHHH
Q ss_conf 2788994111427885410002221000121000001233089999999999626-----99799993744448998999
Q gi|255764495|r 9 MFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLH-----NVDHVSITGDIVNFTCNREI 83 (309)
Q Consensus 9 m~ri~hlSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~-----~pD~vvitGDl~~~~~~~~~ 83 (309)
|.||+.|||+| | ....|+++++.+.+. .+|.|+++||+++.|...
T Consensus 1 m~~I~visDiH-g---------------------------~~~~l~~~l~~i~~~~~~~~~~d~ii~lGDlvd~Gp~~-- 50 (252)
T 1nnw_A 1 MVYVAVLANIA-G---------------------------NLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYP-- 50 (252)
T ss_dssp -CEEEEEECCT-T---------------------------CHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCH--
T ss_pred CCEEEEEECCC-C---------------------------CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCH--
T ss_conf 97899997303-5---------------------------98999999999997432589877899937828998886--
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCC
Q ss_conf 99999998618997189994588422220356766432454313444445556212799719879998328888887554
Q gi|255764495|r 84 FTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSA 163 (309)
Q Consensus 84 ~~~~~~~~~l~~~~~v~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~s~~~~~~~~~ 163 (309)
....+++..+....++++|+||||.+....... ... ............ ........
T Consensus 51 ~e~~~~l~~l~~~~~~~~i~GNHD~~~~~~~~~--------~~~-~~~~~~~~~~~~---------------~~~~~~~~ 106 (252)
T 1nnw_A 51 KEVIEVIKDLTKKENVKIIRGKYDQIIAMSDPH--------ATD-PGYIDKLELPGH---------------VKKALKFT 106 (252)
T ss_dssp HHHHHHHHHHHHHSCEEEECCHHHHHHHHSCTT--------CSS-SGGGGGSSCCHH---------------HHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCC--------CCC-CCHHHHHCCCHH---------------HHHHHHHH
T ss_conf 999999997655178289638856999740524--------555-310222026566---------------77878889
Q ss_pred CCEECHHHHHHHHHHHHHCC-CCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHC-CCEEEEECCCCCCEEEEEEC
Q ss_conf 76008999999999985243-36970899983768887643110127978999999874-98199998767532478716
Q gi|255764495|r 164 NGYFGQEQAHATSKLLRKAN-KKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHE-GADLILHGHTHLNSLHWIKN 241 (309)
Q Consensus 164 ~g~~~~~q~~~l~~~L~~~~-~~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~l~~~l~~~-~v~lvl~GH~H~~~~~~~~~ 241 (309)
...+..+++.|++....... ......++++|++|................+..++... +.++++|||+|.+....+.+
T Consensus 107 ~~~~~~~~~~~l~~l~~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~GHtH~~~~~~~~~ 186 (252)
T 1nnw_A 107 WEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMTRY 186 (252)
T ss_dssp HHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEEETT
T ss_pred HHHCCHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECC
T ss_conf 87636888999873763259984389589993786776533246754688877763001466248972474467886078
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCC
Q ss_conf 99868999957623577888877854899995389838999999513776
Q gi|255764495|r 242 EKKLIPVVGIASASQKVHSNKPQASYNLFYIEKKNEYWTLEGKRYTLSPD 291 (309)
Q Consensus 242 ~~~~~~~~~~~s~~~~~~~~~~~~~y~li~i~~~~~~~~v~~~r~~~~~d 291 (309)
..+++++|++... .+.+.++|.+++++.. .+++.+..|..+
T Consensus 187 ----~~~iN~Gsvg~~~-~~~~~~~y~i~d~~~~----~v~~~~~~YD~~ 227 (252)
T 1nnw_A 187 ----GRVVCPGSVGFPP-GKEHKATFALVDVDTL----KPKFIEVEYDKK 227 (252)
T ss_dssp ----EEEEEECCSSSCS-SSSCCEEEEEEETTTC----CEEEEEECCCSH
T ss_pred ----CEEECCCEEEECC-CCCCCCEEEEEECCCC----EEEEEEECCCHH
T ss_conf ----3687186160078-9998777999993798----799999789989