HHsearch results for GI: 255764495 and protein with PDBid: 1nnw_A

>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.83  E-value=1.4e-20  Score=152.72  Aligned_cols=220  Identities=11%  Similarity=0.057  Sum_probs=129.2

Q ss_pred             EEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHC-----CCCEEEECCCCCCCCCHHHH
Q ss_conf             2788994111427885410002221000121000001233089999999999626-----99799993744448998999
Q gi|255764495|r    9 MFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLH-----NVDHVSITGDIVNFTCNREI   83 (309)
Q Consensus         9 m~ri~hlSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~-----~pD~vvitGDl~~~~~~~~~   83 (309)
                      |.||+.|||+| |                           ....|+++++.+.+.     .+|.|+++||+++.|...  
T Consensus         1 m~~I~visDiH-g---------------------------~~~~l~~~l~~i~~~~~~~~~~d~ii~lGDlvd~Gp~~--   50 (252)
T 1nnw_A            1 MVYVAVLANIA-G---------------------------NLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYP--   50 (252)
T ss_dssp             -CEEEEEECCT-T---------------------------CHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCH--
T ss_pred             CCEEEEEECCC-C---------------------------CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCH--
T ss_conf             97899997303-5---------------------------98999999999997432589877899937828998886--


Q ss_pred             HHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCC
Q ss_conf             99999998618997189994588422220356766432454313444445556212799719879998328888887554
Q gi|255764495|r   84 FTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSA  163 (309)
Q Consensus        84 ~~~~~~~~~l~~~~~v~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~s~~~~~~~~~  163 (309)
                      ....+++..+....++++|+||||.+.......        ... ............               ........
T Consensus        51 ~e~~~~l~~l~~~~~~~~i~GNHD~~~~~~~~~--------~~~-~~~~~~~~~~~~---------------~~~~~~~~  106 (252)
T 1nnw_A           51 KEVIEVIKDLTKKENVKIIRGKYDQIIAMSDPH--------ATD-PGYIDKLELPGH---------------VKKALKFT  106 (252)
T ss_dssp             HHHHHHHHHHHHHSCEEEECCHHHHHHHHSCTT--------CSS-SGGGGGSSCCHH---------------HHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCC--------CCC-CCHHHHHCCCHH---------------HHHHHHHH
T ss_conf             999999997655178289638856999740524--------555-310222026566---------------77878889


Q ss_pred             CCEECHHHHHHHHHHHHHCC-CCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHC-CCEEEEECCCCCCEEEEEEC
Q ss_conf             76008999999999985243-36970899983768887643110127978999999874-98199998767532478716
Q gi|255764495|r  164 NGYFGQEQAHATSKLLRKAN-KKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHE-GADLILHGHTHLNSLHWIKN  241 (309)
Q Consensus       164 ~g~~~~~q~~~l~~~L~~~~-~~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~l~~~l~~~-~v~lvl~GH~H~~~~~~~~~  241 (309)
                      ...+..+++.|++....... ......++++|++|................+..++... +.++++|||+|.+....+.+
T Consensus       107 ~~~~~~~~~~~l~~l~~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~GHtH~~~~~~~~~  186 (252)
T 1nnw_A          107 WEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMTRY  186 (252)
T ss_dssp             HHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEEETT
T ss_pred             HHHCCHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECC
T ss_conf             87636888999873763259984389589993786776533246754688877763001466248972474467886078


Q ss_pred             CCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCC
Q ss_conf             99868999957623577888877854899995389838999999513776
Q gi|255764495|r  242 EKKLIPVVGIASASQKVHSNKPQASYNLFYIEKKNEYWTLEGKRYTLSPD  291 (309)
Q Consensus       242 ~~~~~~~~~~~s~~~~~~~~~~~~~y~li~i~~~~~~~~v~~~r~~~~~d  291 (309)
                          ..+++++|++... .+.+.++|.+++++..    .+++.+..|..+
T Consensus       187 ----~~~iN~Gsvg~~~-~~~~~~~y~i~d~~~~----~v~~~~~~YD~~  227 (252)
T 1nnw_A          187 ----GRVVCPGSVGFPP-GKEHKATFALVDVDTL----KPKFIEVEYDKK  227 (252)
T ss_dssp             ----EEEEEECCSSSCS-SSSCCEEEEEEETTTC----CEEEEEECCCSH
T ss_pred             ----CEEECCCEEEECC-CCCCCCEEEEEECCCC----EEEEEEECCCHH
T ss_conf             ----3687186160078-9998777999993798----799999789989