HHsearch results for GI: 255764495 and protein with PDBid: 1s3l_A

>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC structure funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.72  E-value=6.5e-16  Score=122.08  Aligned_cols=163  Identities=18%  Similarity=0.178  Sum_probs=102.8

Q ss_pred             CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHH
Q ss_conf             32553278899411142788541000222100012100000123308999999999962699799993744448998999
Q gi|255764495|r    4 RYTTIMFVLAHISDIHLSYSPSFFELSPKRIIGLVNWHFNRKKYFSKEVANLLINDILLHNVDHVSITGDIVNFTCNREI   83 (309)
Q Consensus         4 ~~~~~m~ri~hlSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~pD~vvitGDl~~~~~~~~~   83 (309)
                      +|.++| ||+-|||+|-                            ....|+++++.++++++|.|+++||++..   .  
T Consensus        21 ~~~~~M-KI~iiSDiHg----------------------------n~~ale~vl~~~~~~~~D~vi~lGDiv~~---~--   66 (190)
T 1s3l_A           21 YFQGHM-KIGIMSDTHD----------------------------HLPNIRKAIEIFNDENVETVIHCGDFVSL---F--   66 (190)
T ss_dssp             -----C-EEEEECCCTT----------------------------CHHHHHHHHHHHHHSCCSEEEECSCCCST---H--
T ss_pred             CCCCCC-EEEEEECCCC----------------------------CHHHHHHHHHHHHHCCCCEEEECCCCCCH---H--
T ss_conf             236875-8999980899----------------------------96999999999975599999987883898---9--


Q ss_pred             HHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCC
Q ss_conf             99999998618997189994588422220356766432454313444445556212799719879998328888887554
Q gi|255764495|r   84 FTSTHWLRSIGNPHDISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCSTAIATPPFSA  163 (309)
Q Consensus        84 ~~~~~~~~~l~~~~~v~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~s~~~~~~~~~  163 (309)
                        ..+.+..+  ..|+++|.||||..........     .......          .   ......+             
T Consensus        67 --~~~~l~~~--~~~~~~V~GNhD~~~~~~~~~~-----~~~~~~~----------~---~~~~~~~-------------  111 (190)
T 1s3l_A           67 --VIKEFENL--NANIIATYGNNDGERCKLKEWL-----KDINEEN----------I---IDDFISV-------------  111 (190)
T ss_dssp             --HHHHGGGC--SSEEEEECCTTCCCHHHHHHHH-----HHHCTTC----------E---EESEEEE-------------
T ss_pred             --HHHHHHHC--CCCEEEEECCCCCCHHHHHHHH-----HHCCCCC----------C---CCCEEEE-------------
T ss_conf             --99998734--7608997276543035577776-----5312222----------3---5621346-------------


Q ss_pred             CCEECHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCC
Q ss_conf             76008999999999985243369708999837688876431101279789999998749819999876753247871699
Q gi|255764495|r  164 NGYFGQEQAHATSKLLRKANKKGFFRIIMMHHPPVLDTSSLYNRMFGIQRFQKMIWHEGADLILHGHTHLNSLHWIKNEK  243 (309)
Q Consensus       164 ~g~~~~~q~~~l~~~L~~~~~~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~l~~~l~~~~v~lvl~GH~H~~~~~~~~~~~  243 (309)
                                         .. ...+|+++|.++             .+.+..++...++++++|||+|.+......+  
T Consensus       112 -------------------~~-~~~~i~l~Hg~~-------------~~~l~~~~~~~~~div~~GHTH~~~~~~~~~--  156 (190)
T 1s3l_A          112 -------------------EI-DDLKFFITHGHH-------------QSVLEMAIKSGLYDVVIYGHTHERVFEEVDD--  156 (190)
T ss_dssp             -------------------EE-TTEEEEEEESCC-------------HHHHHHHHHHSCCSEEEEECSSCCEEEEETT--
T ss_pred             -------------------EE-CCCEEEEEECCC-------------HHHHHHHHHCCCCCEEEECCCCCCCEEEECC--
T ss_conf             -------------------75-484899998981-------------2657888642797699999957632799999--


Q ss_pred             CCEEEEEECCCCCCCCCCCCCCCEEEEEEECC
Q ss_conf             86899995762357788887785489999538
Q gi|255764495|r  244 KLIPVVGIASASQKVHSNKPQASYNLFYIEKK  275 (309)
Q Consensus       244 ~~~~~~~~~s~~~~~~~~~~~~~y~li~i~~~  275 (309)
                        ..+++.||++..+.  + .++|.+++++.+
T Consensus       157 --~~~iNPGSvg~pr~--~-~~s~aild~~~~  183 (190)
T 1s3l_A          157 --VLVINPGECCGYLT--G-IPTIGILDTEKK  183 (190)
T ss_dssp             --EEEEECCCSSCTTT--S-CCEEEEEETTTT
T ss_pred             --EEEEECCCCCCCCC--C-CCEEEEEECCCC
T ss_conf             --99997999888899--9-977999994799