HHsearch results for GI: 255764495 and protein with PDBid: 3flo_A
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc-binding motif, DNA replication; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=97.74 E-value=0.0024 Score=39.37 Aligned_cols=102 Identities=16% Similarity=0.065 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHHHH-CCCCEEEECCCCCCCCCH--------------------HH-H-HHHHHHHHHHCCCCCEEEEECC
Q ss_conf 08999999999962-699799993744448998--------------------99-9-9999999861899718999458
Q gi|255764495|r 49 SKEVANLLINDILL-HNVDHVSITGDIVNFTCN--------------------RE-I-FTSTHWLRSIGNPHDISIVPGN 105 (309)
Q Consensus 49 ~~~~l~~~~~~i~~-~~pD~vvitGDl~~~~~~--------------------~~-~-~~~~~~~~~l~~~~~v~~v~GN 105 (309)
....|..+++.+.. .+|+.+|+.|+.++...+ .+ + ..+..++..+....+|.+|||+
T Consensus 164 ~~e~L~~ll~~~~~~~~p~~LIL~Gpfvd~~~~~i~~g~~~~~~~~~~~~~~~~~~f~~~l~~~l~~i~~~~~vilvPg~ 243 (460)
T 3flo_A 164 SLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFTPILKTISPHIQTVLIPST 243 (460)
T ss_dssp CCHHHHHHHHHHHHTTCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTHHHHTTSCTTSEEEEECCT
T ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 58999999987525468977999547251466401157756731112014568999999999877424566469995688
Q ss_pred CCCCCC---CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECC
Q ss_conf 842222---0356766432454313444445556212799719879998328
Q gi|255764495|r 106 HDAYIS---GAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRNNIALIGCST 154 (309)
Q Consensus 106 HD~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~s 154 (309)
||.... .....+. +...............|.....+++.+.+...
T Consensus 244 ~D~~~~~~~~PQpp~~----~~~~~~~~~~i~~~sNP~~~~in~v~i~~~s~ 291 (460)
T 3flo_A 244 KDAISNHAAYPQASLI----RKALQLPKRNFKCMANPSSFQINEIYFGCSNV 291 (460)
T ss_dssp TBTTCSCCSBSBCCCC----TTTTTCCTTTEEECCBSEEEEETTEEEEECCS
T ss_pred CCCCCCCCCCCCCCCC----HHHHHCCCCCEEECCCCEEEEECCEEEEEECC
T ss_conf 6532345456887661----66651100150862797598999989999577