HHsearch alignment for GI: 255764496 and conserved domain: COG0258
>COG0258 Exo 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair].
Probab=94.71 E-value=0.059 Score=33.65 Aligned_cols=172 Identities=15% Similarity=0.104 Sum_probs=78.9
Q ss_pred EEEEEEEECCCCC--HHHHHHHHCCCCCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 4888885168728--032321102444455-4116899899999999775313111233333333454579848998098
Q gi|255764496|r 396 VGCMVVVGENGFV--KNQYRKFNLHPNDVK-TQDDCAMMRMVLERRFSQLIKNEENLNFHPKKQEYSFPSWPDVVILDGG 472 (616)
Q Consensus 396 Vas~Vvf~~g~~~--K~~YR~f~Ik~~~v~-~~DD~~~m~Evi~RR~~r~~~~~~~l~~~~~~~~~~~~~~PDLilIDGG 472 (616)
T Consensus 61 ~~~~~vFD~~~~tfR~~~~~~yK~~R--~~~~p~~l~~q~~~i~~~~~~~~~~~-----------l~~~G~e-add~i~t 126 (310)
T COG0258 61 THPVVVFDGKPPTFRHELLEEYKANR--EKEMPDELAPQIPILTELLVALGIPL-----------LELMGIE-ADDPIET 126 (310)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHCCHH-----------HHCCCCC-CCCCCCH
T ss_conf 61799976999622788899998468--95588999998899999999838255-----------3278968-3144408
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEECCCCC-EEEE-CCCCHHHHHHHHHHHHHHHHHHHH-----H
Q ss_conf 58999999999975887787189997187767663489817983-4885-799899999998878778878898-----9
Q gi|255764496|r 473 KGQLSAAQGVLKKLNVENRITIISIAKGPKRSAGMEKFFVKKGE-ALVL-NMRDPILYFIQRLRDEAHRFAITT-----H 545 (616)
Q Consensus 473 kgQln~a~~vl~~l~i~~~i~viglaK~~~r~~~~e~~~~~~~~-~i~l-~~~~~~l~~Lq~iRDEaHRFAi~~-----h 545 (616)
T Consensus 127 ~A~~a~------~~g-----~~~~I~S~Dk-----D~lql~~~~~~~~~~~~~~~~~------~~~~~~~~e~~~g~~p~ 184 (310)
T COG0258 127 LAQKAY------KKG-----DVVLIISGDK-----DLLQLVSPNVLVINGKKGEPEK------FLDLEEVEEKFKGLTPE 184 (310)
T ss_pred HHHHHH------HCC-----CCEEEEECCC-----CEEEECCCCEEEEECCCCCCCC------CCCHHHHHHHHCCCCHH
T ss_conf 999988------649-----9579997896-----7001148961786257788523------48999999985699989
Q ss_pred HHHHH-HHCC---C-CHHCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 98643-2147---7-1004888798999999998088898993898888627899989999999985
Q gi|255764496|r 546 RKRRK-KAAY---S-PLDEINGIGPLRKRLLLQSFGTVKMISRSSPETLASIEGISKKIACKIYNHF 607 (616)
Q Consensus 546 Rk~r~-k~~~---S-~Ld~I~GIG~k~~~~Ll~~Fgs~~~i~~As~eeL~~v~gi~~~~A~~I~~~l 607 (616)
T Consensus 185 -qliD~~~L~Gd~sDnipGV~GIG~ktA~~Ll~~~gs~e~i~~~~~-~~~~~--~~~~l~~~~~~af 247 (310)
T COG0258 185 -QLIDLKALVGDSSDNIPGVKGIGPKTALKLLQEYGSLEGLYENLD-IIKKK--TREKLLEDKEKAF 247 (310)
T ss_pred -HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH-HCCCC--HHHHHHHHHHHHH
T ss_conf -988999982965357899998389999999998385999998775-21220--2566787799986