HHsearch alignment for GI: 255764496 and conserved domain: COG0272
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair].
Probab=92.82 E-value=0.28 Score=28.79 Aligned_cols=96 Identities=19% Similarity=0.205 Sum_probs=70.5
Q ss_pred EEEECCCCHHHH-HHHHHHHHHHHHHHH-HH-HHHHH-HHC--CC-CHHCCCCCCHHHHHHHHHH--HCCHHHHHHCCHH
Q ss_conf 488579989999-999887877887889-89-98643-214--77-1004888798999999998--0888989938988
Q gi|255764496|r 517 ALVLNMRDPILY-FIQRLRDEAHRFAIT-TH-RKRRK-KAA--YS-PLDEINGIGPLRKRLLLQS--FGTVKMISRSSPE 587 (616)
Q Consensus 517 ~i~l~~~~~~l~-~Lq~iRDEaHRFAi~-~h-Rk~r~-k~~--~S-~Ld~I~GIG~k~~~~Ll~~--Fgs~~~i~~As~e 587 (616)
T Consensus 400 ~~~~P~~CP~C~s~l~r~~~e~~~rC~n~~~C~aq~~e~l~hfvSr~AmdI~GLG~k~i~~L~e~~lI~~~~Dly~Lt~~ 479 (667)
T COG0272 400 PIPFPTHCPVCGSELVREEGEVVIRCTNGLNCPAQLKERLIHFVSRNALDIDGLGEKIIEQLFEKGLIKDIADLYTLTEE 479 (667)
T ss_pred CCCCCCCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCHH
T ss_conf 88899979889997674267556866898788588862334674478657777679999999973753787987737898
Q ss_pred HHHHCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 8862789998999999998547867
Q gi|255764496|r 588 TLASIEGISKKIACKIYNHFHKNTS 612 (616)
Q Consensus 588 eL~~v~gi~~~~A~~I~~~l~~~~~ 612 (616)
T Consensus 480 ~l~~l~~~~~ks~~nLl~aIe~sK~ 504 (667)
T COG0272 480 DLLSLEGFGEKSAENLLNAIEKSKK 504 (667)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHCC
T ss_conf 8841622446579999999998604