HHsearch alignment for GI: 255764496 and conserved domain: PRK00254
>PRK00254 ski2-like helicase; Provisional.
Probab=98.10 E-value=2.2e-05 Score=58.41 Aligned_cols=84 Identities=29% Similarity=0.411 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHH----------------HHHHHHH---CC---CCHHCCCCCCHHHHHHHHHH-HCCHHHHHHCC
Q ss_conf 99988787788788989----------------9864321---47---71004888798999999998-08889899389
Q gi|255764496|r 529 FIQRLRDEAHRFAITTH----------------RKRRKKA---AY---SPLDEINGIGPLRKRLLLQS-FGTVKMISRSS 585 (616)
Q Consensus 529 ~Lq~iRDEaHRFAi~~h----------------Rk~r~k~---~~---S~Ld~I~GIG~k~~~~Ll~~-Fgs~~~i~~As 585 (616)
T Consensus 596 ~lq~l~~~a~~~a~~~~~~~~~l~~~~~~~~~l~~l~~Rl~~Gv~~ELl~L~~I~gvgr~RAR~Ly~aGi~s~~~ia~A~ 675 (717)
T PRK00254 596 DIYRIVETAEWLVYSLKEIAKVLEASQDVVDYLETLRLRVKHGIREELIPLMELPMIGRKRARALYNAGFRDLEDIMNAK 675 (717)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHCCC
T ss_conf 99999999999999999999983851889999999999998099765683564899898999999986999999996599
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 888862789998999999998547867
Q gi|255764496|r 586 PETLASIEGISKKIACKIYNHFHKNTS 612 (616)
Q Consensus 586 ~eeL~~v~gi~~~~A~~I~~~l~~~~~ 612 (616)
T Consensus 676 p~~l~~i~g~g~~~a~~i~~~~~~~~~ 702 (717)
T PRK00254 676 PSELLAVEGIGAKIVEGIFKHLGKEVK 702 (717)
T ss_pred HHHEECCCCCCHHHHHHHHHHHCCEEE
T ss_conf 999030237278999999998386443