HHsearch alignment for GI: 255764496 and conserved domain: PRK06887
>PRK06887 consensus.
Probab=97.04 E-value=0.00077 Score=47.23 Aligned_cols=138 Identities=25% Similarity=0.286 Sum_probs=79.1
Q ss_pred CCCCEEEEECCHH-----HHHHHHHHHH--HCCCCCCCCEEEEECCCCCCCCCEEEECCCCCEEEECCCC-HHHHHHHHH
Q ss_conf 7984899809858-----9999999999--7588778718999718776766348981798348857998-999999988
Q gi|255764496|r 462 SWPDVVILDGGKG-----QLSAAQGVLK--KLNVENRITIISIAKGPKRSAGMEKFFVKKGEALVLNMRD-PILYFIQRL 533 (616)
Q Consensus 462 ~~PDLilIDGGkg-----Qln~a~~vl~--~l~i~~~i~viglaK~~~r~~~~e~~~~~~~~~i~l~~~~-~~l~~Lq~i 533 (616)
T Consensus 670 ~L~~~i~~~tgRiHt~f~q~~t~TGRlSS~~PNLQN-IPiRte-~G--r~i-R~aF~~~~g~~l~saDYSQIELRilAh~ 744 (954)
T PRK06887 670 KLPQMVNSKTGRVHTSYHQAVTATGRLSSSDPNLQN-IPIRNE-EG--RRI-RQAFIARDGYKIVAADYSQIELRIMAHL 744 (954)
T ss_pred HHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC-CCCCCH-HH--HHH-HEEEECCCCCEEEEECHHHHHHHHHHHH
T ss_conf 887640778987777652011231201379986336-887860-22--233-4005438998899714528999999999
Q ss_pred -HHHHHHHHHHH----HHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHC
Q ss_conf -78778878898----9986432147710048887989999999980888989938988886278999899999999854
Q gi|255764496|r 534 -RDEAHRFAITT----HRKRRKKAAYSPLDEINGIGPLRKRLLLQSFGTVKMISRSSPETLASIEGISKKIACKIYNHFH 608 (616)
Q Consensus 534 -RDEaHRFAi~~----hRk~r~k~~~S~Ld~I~GIG~k~~~~Ll~~Fgs~~~i~~As~eeL~~v~gi~~~~A~~I~~~l~ 608 (616)
T Consensus 745 s~d~~l~~af~~g~DiH~~tA~~vf~~~~~~v~--~~~R~~aK~vnfgi~YG---~~~~gLs~~l~i~~~eA~~~i~~yf 819 (954)
T PRK06887 745 SGDQGLINAFSEGKDIHRSTAAEIFGLSLDEVT--SEQRRSAKAINFGLIYG---MSAFGLSRQLGISRADAQKYMDLYF 819 (954)
T ss_pred HCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHCC--HHHHHHHHHHHHHHHHC---CCHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 668879999863888027789999499946689--88998768887665661---6877799870989999999999998
Q ss_pred C
Q ss_conf 7
Q gi|255764496|r 609 K 609 (616)
Q Consensus 609 ~ 609 (616)
T Consensus 820 ~ 820 (954)
T PRK06887 820 Q 820 (954)
T ss_pred H
T ss_conf 8