HHsearch alignment for GI: 255764496 and conserved domain: PRK12306
>PRK12306 uvrC excinuclease ABC subunit C; Reviewed.
Probab=100.00 E-value=0 Score=1313.79 Aligned_cols=512 Identities=37% Similarity=0.617 Sum_probs=482.5
Q ss_pred CCHHHCCCCCCEEEEECCCCCEEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 99125867886258886998888996012587888761378877879999997344429998287199999999887761
Q gi|255764496|r 1 MSSEQMPECPGVYQMLDIAGRVLYVGKAYNLQKRIKSYMHSNNHTHRITHMISQINNIRFTVTCTEVEALLLEANMIKRL 80 (616)
Q Consensus 1 ~~~~~lP~~pGvY~~~~~~~~iiYvGKaknL~~Rv~syf~~~~~~~k~~~l~~~~~~ie~~~t~~e~eAlilE~~lIk~~ 80 (616)
T Consensus 2 ~~L~~lP~~PGVY~~~d~~~~viYVGKAknLk~Rv~sYf~~~~~~~kt~~mv~~i~~ie~ivt~sE~EALlLE~nLIK~~ 81 (519)
T PRK12306 2 IDLSDIPKNPGCYLYKDEEGTIIYVGKAKNLKKRVSSYFQKKNHDPKTQSLVKAIRDIEFIVTDNEVEAFLLENTLIKKH 81 (519)
T ss_pred CCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHH
T ss_conf 77010989985389988999899996015377789985688899858999999873479999698899999999998674
Q ss_pred CCCCEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 87200336468977269980889984599981235678437703788789999999999730110035542124788662
Q gi|255764496|r 81 KPRFNILLRDDKSFPYILITDKHKIPALYKHRDSSTIQGSYFGPFASVDAVEKTINSLQRTFFLRSCADSVFRHRTRPCL 160 (616)
Q Consensus 81 ~P~yNi~LkDdk~yPyi~it~~~~~p~l~~~r~~~~~~~~yfGPf~~~~~~~~~l~~l~~~f~lR~C~~~~~~~~~~pCl 160 (616)
T Consensus 82 kP~yNilLkDdK~YPyi~it-~e~~Pri~~~R~~~~-~g~YfGPf~~~~~~~~~l~~l~k~F~lR~C~~----~~~RpCL 155 (519)
T PRK12306 82 QPKYNIDLKDSKRYAYIYIS-EEKFPRIGIARNKSG-KGKFFGPFVSAKERDYVLDVLKKTFQLRSCKN----MPKRPCL 155 (519)
T ss_pred CCCCCEECCCCCCCCEEEEE-CCCCCCEEEEEECCC-CCEEECCCCCHHHHHHHHHHHHHHHCCCCCCC----CCCCCCH
T ss_conf 89862433679987279995-898873367751389-98188997987999999999999722264557----8998307
Q ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
Q ss_conf 4455425866131220356655543234550387158999999999999863338888889999999986221100024-
Q gi|255764496|r 161 LFQIKRCSGPCTGEISSEKYMEFVHEAKKFLSGGNHNLKEKIARNMNQATLKEDYESAIIHRDRLAALSHIQNHNDSIY- 239 (616)
Q Consensus 161 ~y~i~~C~gpC~~~is~~~Y~~~v~~~~~fL~G~~~~ii~~L~~~M~~aS~~l~FE~Aa~~RD~I~aL~~i~~~q~v~~- 239 (616)
T Consensus 156 ~y~I~rC~aPCvg~is~e~Y~~~V~~~~~fL~Gk~~~~~~~L~~~M~~aS~~l~FE~AA~~RD~I~aL~~i~~~Q~v~~~ 235 (519)
T PRK12306 156 RYHIGNCTAPCTGNISSDEYLEQVKKAEEVLKGNIQELIEKLEEEMAEKAKNQQFERALVIRDEINAIENLQERQNVERQ 235 (519)
T ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 87862798087896899999999999999981796899999999999999744089999999999999999750511157
Q ss_pred --CCCCHHHHCCCCCEEEEEEEEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHEECCCCCH-HHHHH
Q ss_conf --542011100018834788998424745410113566777899789888777543213789812310268885-78766
Q gi|255764496|r 240 --NRMDCFSLYHNKNLACIQTCFFHFGQNRGTCTFFLKTDSESTNAQILSYFLRQFYTDKPCPENILLSEEAEE-TSLLE 316 (616)
Q Consensus 240 --~d~Dvi~i~~~~~~~~I~vl~vR~G~i~g~~~f~~~~~~~~~~~eil~~fI~qyY~~~~iP~~Iiv~~~~~~-~~~l~ 316 (616)
T Consensus 236 ~~~d~Dvi~~~~~~~~~~i~v~~vR~G~l~g~~~~~~~~-----~e~il~~fl~qyY~~~~~P~~Iil~~~~~~~~~~l~ 310 (519)
T PRK12306 236 KKYDEDIINYIVKDGTVYLMVFNVLKGTLFDKKEFVFDY-----GENFFEEFLIQYYSENEPPSEIILSELPENLEEALL 310 (519)
T ss_pred CCCCCCEEEEEECCCEEEEEEEEEECCEEECCCCCCCCC-----CHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHH
T ss_conf 765541578986288299999999899983575221576-----405799999999743799840342578876689999
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCE
Q ss_conf 65432013433321256552667899999999986554323343389999999875156643516999707443775404
Q gi|255764496|r 317 ISFFKQYGYKVKITVPKQGEKRKIIEQALINAHRSHTQKLSTEISHQMILKDFTKKFALPHIPKRIEIYDNSHIMGCSAV 396 (616)
Q Consensus 317 ~~L~~k~g~kV~i~~P~rG~kk~Ll~lA~~NA~~~l~~k~~~~~~~~~~l~~Lk~~L~L~~~p~rIE~fDiSh~~G~~~V 396 (616)
T Consensus 311 ~~L~~~~~~kv~i~~P~rG~kk~ll~lA~~Na~~~~~~~-------~~~l~~Lk~~L~L~~~p~rIEcfDiSh~~G~~~V 383 (519)
T PRK12306 311 EYLSHKKGSKVKITVPKQGEKKQLLDLALKNLEIYFFGD-------EIKLEELKNKLHLPKPPNVIECFDISHLSGTSTV 383 (519)
T ss_pred HHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCE
T ss_conf 999886099569975896489999999999999999866-------9999999998299987766999853111687747
Q ss_pred EEEEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHH
Q ss_conf 88888516872803232110244445541168998999999997753131112333333334545798489980985899
Q gi|255764496|r 397 GCMVVVGENGFVKNQYRKFNLHPNDVKTQDDCAMMRMVLERRFSQLIKNEENLNFHPKKQEYSFPSWPDVVILDGGKGQL 476 (616)
Q Consensus 397 as~Vvf~~g~~~K~~YR~f~Ik~~~v~~~DD~~~m~Evi~RR~~r~~~~~~~l~~~~~~~~~~~~~~PDLilIDGGkgQl 476 (616)
T Consensus 384 asmVvF~~g~p~K~~YRkf~Ik~--~~~~DDy~~M~Evl~RR~~r~~~e~~--------------~lPDLilIDGGkgQl 447 (519)
T PRK12306 384 GSMVQFRNGKPDKKNYRRFKIKT--VEGIDDFASIAEVVKRRYSRLLEENS--------------ELPDLIIIDGGKGQL 447 (519)
T ss_pred EEEEEEECCCCCHHHHCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHHCCC--------------CCCCEEEECCCHHHH
T ss_conf 99999978985857832722689--99985799999999999988775289--------------999989985999999
Q ss_pred HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999758877871899971877676634898179834885799899999998878778878898998643214
Q gi|255764496|r 477 SAAQGVLKKLNVENRITIISIAKGPKRSAGMEKFFVKKGEALVLNMRDPILYFIQRLRDEAHRFAITTHRKRRKKAA 553 (616)
Q Consensus 477 n~a~~vl~~l~i~~~i~viglaK~~~r~~~~e~~~~~~~~~i~l~~~~~~l~~Lq~iRDEaHRFAi~~hRk~r~k~~ 553 (616)
T Consensus 448 ~~a~~vl~~l~~~--i~viglaK~~e-----~i~~~~~~~~i~l~~~s~~l~lLq~iRDEaHRFAIt~HR~~R~K~~ 517 (519)
T PRK12306 448 SSAFKELRKLKLK--IPIISIAKREE-----EIYVPGIKNPLPIKKNEKASLFIQEIRDEAHRFAITYNRLLRKKSL 517 (519)
T ss_pred HHHHHHHHHCCCC--CEEEEEEECCE-----EEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 9999999976999--32999980783-----8963899864565999989999999998798879998987515333