HHsearch alignment for GI: 255764496 and conserved domain: pfam00633
>pfam00633 HHH Helix-hairpin-helix motif. The helix-hairpin-helix DNA-binding motif is found to be duplicated in the central domain of RuvA. The HhH domain of DisA, a bacterial checkpoint control protein, is a DNA-binding domain.
Probab=95.22 E-value=0.0084 Score=39.73 Aligned_cols=30 Identities=23% Similarity=0.301 Sum_probs=26.4
Q ss_pred CHHHHHHCCHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 889899389888862789998999999998
Q gi|255764496|r 577 TVKMISRSSPETLASIEGISKKIACKIYNH 606 (616)
Q Consensus 577 s~~~i~~As~eeL~~v~gi~~~~A~~I~~~ 606 (616)
T Consensus 1 ~~~~~~~as~eeL~~lpGVG~~tA~~I~~~ 30 (30)
T pfam00633 1 SLEGLIPASREELLALPGVGPKTAEAILSY 30 (30)
T ss_pred CCCCCCCCCHHHHHHCCCCCHHHHHHHHCC
T ss_conf 964435235999972889776889988539