HHsearch results for GI: 255764496 and protein with PDBid: 1ixr_A

>1ixr_A Holliday junction DNA helicase RUVA; heterooligomeric complex, octameric RUVA, AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ANP; 3.30A {Thermus thermophilus} SCOP: a.60.2.1 b.40.4.2

Probab=97.70  E-value=8.3e-05  Score=52.65  Aligned_cols=65  Identities=18%  Similarity=0.331  Sum_probs=55.0

Q ss_pred             HHHHHCCCCHHCCCCCCHHHHHHHHHHHC---CHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCCCC
Q ss_conf             64321477100488879899999999808---889899389888862789998999999998547867
Q gi|255764496|r  548 RRKKAAYSPLDEINGIGPLRKRLLLQSFG---TVKMISRSSPETLASIEGISKKIACKIYNHFHKNTS  612 (616)
Q Consensus       548 ~r~k~~~S~Ld~I~GIG~k~~~~Ll~~Fg---s~~~i~~As~eeL~~v~gi~~~~A~~I~~~l~~~~~  612 (616)
                      +..+.++..|-.|+|||||..-.+|..+.   =+..|.+-+..-|+++||||+++|++|.-.|+..-.
T Consensus        65 ~~Er~lF~~Li~V~GIGpK~Al~ILs~~~~~~l~~aI~~~D~~~L~~vpGIGkKtAerIilELk~K~~  132 (191)
T 1ixr_A           65 EENLALFELLLSVSGVGPKVALALLSALPPRLLARALLEGDARLLTSASGVGRRLAERIALELKGKVP  132 (191)
T ss_dssp             HHHHHHHHHHHSSSCCCHHHHHHHHHHSCHHHHHHHHHTTCHHHHTTSTTCCHHHHHHHHHHHTTTSC
T ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             89999999985768837788988872599999999998399999501888468899999999986434