HHsearch results for GI: 255764496 and protein with PDBid: 1yd0_A
>1yd0_A Uvrabc system protein C; DNA binding protein; 1.50A {Thermotoga maritima} PDB: 1ycz_A 1yd1_A 1yd4_A 1yd3_A 1yd2_A 1yd5_A
Probab=99.95 E-value=3.2e-28 Score=221.49 Aligned_cols=87 Identities=34% Similarity=0.652 Sum_probs=82.7
Q ss_pred HHHCCCCCCEEEEECCCCCEEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCC
Q ss_conf 12586788625888699888899601258788876137887787999999734442999828719999999988776187
Q gi|255764496|r 3 SEQMPECPGVYQMLDIAGRVLYVGKAYNLQKRIKSYMHSNNHTHRITHMISQINNIRFTVTCTEVEALLLEANMIKRLKP 82 (616)
Q Consensus 3 ~~~lP~~pGvY~~~~~~~~iiYvGKaknL~~Rv~syf~~~~~~~k~~~l~~~~~~ie~~~t~~e~eAlilE~~lIk~~~P 82 (616)
.+.+|++||||+|.| +|+|||||||+|||+||+|||++ .+.|+..|+.++.+|||++|+||.|||+||++||++|+|
T Consensus 9 l~~lP~~pGVY~f~d-~~~vLYVGKAknLr~Rv~syf~~--~~~k~~~l~~~~~~i~~~~t~se~eAlllE~~lIk~~kP 85 (96)
T 1yd0_A 9 ILLAPEEPGVYIFKN-KGVPIYIGKAKRLSNRLRSYLNP--QTEKVFRIGEEADELETIVVMNEREAFILEANLIKKYRP 85 (96)
T ss_dssp HHHCCSSCEEEEEEE-TTEEEEEEEESSHHHHHHGGGSC--SSHHHHHHHHHCSEEEEEECSSHHHHHHHHHHHHHHHCC
T ss_pred HHHCCCCCEEEEECC-CCCEEEEECCHHHHHHHHHHHCC--CHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHCC
T ss_conf 985899986899879-99478972608899999988501--118888888762204568418999999999999998589
Q ss_pred CCEECCCCCC
Q ss_conf 2003364689
Q gi|255764496|r 83 RFNILLRDDK 92 (616)
Q Consensus 83 ~yNi~LkDdk 92 (616)
+||++|||||
T Consensus 86 ~yN~~lkd~k 95 (96)
T 1yd0_A 86 KYNVRLKDTD 95 (96)
T ss_dssp TTCC------
T ss_pred CCHHHCCCCC
T ss_conf 5176605789