HHsearch results for GI: 255764496 and protein with PDBid: 1yd6_A

>1yd6_A UVRC; DNA binding protein; 2.00A {Bacillus caldotenax}
Probab=99.96  E-value=6.1e-29  Score=226.69  Aligned_cols=91  Identities=41%  Similarity=0.800  Sum_probs=86.9

Q ss_pred             HHHCCCCCCEEEEECCCCCEEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCC
Q ss_conf             12586788625888699888899601258788876137887787999999734442999828719999999988776187
Q gi|255764496|r    3 SEQMPECPGVYQMLDIAGRVLYVGKAYNLQKRIKSYMHSNNHTHRITHMISQINNIRFTVTCTEVEALLLEANMIKRLKP   82 (616)
Q Consensus         3 ~~~lP~~pGvY~~~~~~~~iiYvGKaknL~~Rv~syf~~~~~~~k~~~l~~~~~~ie~~~t~~e~eAlilE~~lIk~~~P   82 (616)
                      .++||++||||+|+|++|+|||||||+|||+||+|||++. .+.++.+|+.++.+|+|++|.||.+|++||+.||++|+|
T Consensus         9 l~~lP~~pGVY~f~d~~g~vlYVGKaknLr~Rv~shf~~~-~~~~~~~l~~~~~~i~~~~t~~e~~A~llE~~lIk~~~P   87 (99)
T 1yd6_A            9 LAVLPEQPGCYLMKDKHGTVIYVGKAKSLKERVRSYFTGT-HDGKTQRLVEEIADFEYIVTSSNAEALILEMNLIKKHDP   87 (99)
T ss_dssp             HHTCCSSCEEEEEECSSCCEEEEEEESCHHHHHHGGGSSC-CCHHHHHHHHHCSEEEEEECSSHHHHHHHHHHHHHHHCC
T ss_pred             HHHCCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHC-CHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCC
T ss_conf             9868999868999899998999767375889999996213-227899999873372089849788889999999998299


Q ss_pred             CCEECCCCCCCC
Q ss_conf             200336468977
Q gi|255764496|r   83 RFNILLRDDKSF   94 (616)
Q Consensus        83 ~yNi~LkDdk~y   94 (616)
                      +||++|||||+|
T Consensus        88 ~yN~~~k~~k~y   99 (99)
T 1yd6_A           88 KYNVMLKDDKSY   99 (99)
T ss_dssp             HHHHHTCC----
T ss_pred             CCHHCCCCCCCC
T ss_conf             740102589999