HHsearch results for GI: 255764496 and protein with PDBid: 3c1y_A
>3c1y_A DNA integrity scanning protein DISA; DNA damage, DNA repair, DNA-binding, DNA binding protein; HET: DNA 2BA; 2.10A {Thermotoga maritima} PDB: 3c1z_A* 3c21_A* 3c23_A*
Probab=98.08 E-value=6e-06 Score=60.88 Aligned_cols=85 Identities=22% Similarity=0.196 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HC----CC-----CHHCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHH
Q ss_conf 999999988787788788989986432-----14----77-----10048887989999999980888989938988886
Q gi|255764496|r 525 PILYFIQRLRDEAHRFAITTHRKRRKK-----AA----YS-----PLDEINGIGPLRKRLLLQSFGTVKMISRSSPETLA 590 (616)
Q Consensus 525 ~~l~~Lq~iRDEaHRFAi~~hRk~r~k-----~~----~S-----~Ld~I~GIG~k~~~~Ll~~Fgs~~~i~~As~eeL~ 590 (616)
.+...|+.+.++...-.....|-+--. .. .| .|..||.+-....+.|.+||||+++|.+||.|||.
T Consensus 271 ~a~~~L~~L~~~elldl~~ia~~LGy~~~g~~~llD~~v~pRGyRiLskiprlp~~vienLV~~FgsLq~Ll~AS~EeL~ 350 (377)
T 3c1y_A 271 TAQNILQDFITRREPSPISISRVLGYDVQQAAQLDDVLVSARGYRLLKTVARIPLSIGYNVVRMFKTLDQISKASVEDLK 350 (377)
T ss_dssp HHHHHHHHHHTTSCCCHHHHHHHTTCCCSCGGGGGGCBCCCCSHHHHHHTSCCCHHHHHHHHHHHCSHHHHTTCCHHHHT
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHH
T ss_conf 89999986222244676899998299987866644456574178887238999788999999984689999858998896
Q ss_pred HCCCCCHHHHHHHHHHHCC
Q ss_conf 2789998999999998547
Q gi|255764496|r 591 SIEGISKKIACKIYNHFHK 609 (616)
Q Consensus 591 ~v~gi~~~~A~~I~~~l~~ 609 (616)
+|.|||+..|+.|.+.|..
T Consensus 351 eVeGIGe~RAr~IreGL~R 369 (377)
T 3c1y_A 351 KVEGIGEKRARAISESISS 369 (377)
T ss_dssp TSTTCCHHHHHHHHHHHHH
T ss_pred HCCCCCHHHHHHHHHHHHH
T ss_conf 4588589999999999999