RPSBLAST alignment for GI: 255764496 and conserved domain: PRK12306
>gnl|CDD|183423 PRK12306, uvrC, excinuclease ABC subunit C; Reviewed. Length = 519
Score = 349 bits (898), Expect = 1e-96
Identities = 193/570 (33%), Positives = 294/570 (51%), Gaps = 81/570 (14%)
Query: 4 EQMPECPGVYQMLDIAGRVLYVGKAYNLQKRIKSYMHSNNHTHRITHMISQINNIRFTVT 63
+P PG Y D G ++YVGKA NL+KR+ SY +H + ++ I +I F VT
Sbjct: 5 STIPTNPGCYLYKDEEGTIIYVGKAKNLKKRVSSYFQKKDHDPKTQSLVKAIRDIEFIVT 64
Query: 64 CTEVEALLLEANMIKRLKPRFNILLRDDKSFPYILITDKHKIPALYKHRDSSTIQGSYFG 123
EVEALLLE +IK+ P++NI L+D K + YI I+++ K P + R+ S +G +FG
Sbjct: 65 DNEVEALLLENTLIKKHWPKYNIDLKDSKRYAYIYISEE-KFPRIGIARNKSG-KGKFFG 122
Query: 124 PFASVDAVEKTINSLQRTFFLRSCADSVFRHRTRPCLLFQIKRCSGPCTGEISSEKYMEF 183
PF S + ++ L++TF LRSC RPCL + I C+ PCTG ISS++Y+E
Sbjct: 123 PFVSAKERDYVLDVLKKTFQLRSCK----NMPKRPCLRYHIGNCTAPCTGNISSDEYLEQ 178
Query: 184 VHEAKKFLSGGNHNLKEKIARNMNQATLKEDYESAIIHRDRLAALSHIQ---------NH 234
V +A++ L G L EK+ M + + +E A++ RD + A+ ++Q +
Sbjct: 179 VKKAEEVLKGKIDELIEKLEEEMAEKAKNQQFERALVIRDEINAIENLQERQNVERQKKY 238
Query: 235 NDSIYN--------RMDCFSLYHNKNLACIQTCFFHFGQNRGTCTFFLKTDSESTNAQIL 286
++ + N + F++Y L + F +G+N L
Sbjct: 239 DEDVINYLVKDGTVYLMVFNVY-KGTLFDKKEFVFDYGEN------------------FL 279
Query: 287 SYFLRQFYTDKPCPENILLSEEAEETSLLEISFF-KQYGYKVKITVPKQGEKRKIIEQAL 345
FL Q+Y++ P+ I++SE E + + G KVK+TVPKQGEK+++++ AL
Sbjct: 280 EEFLVQYYSENEPPKEIIVSELPENLDEALAEYLSHKKGSKVKVTVPKQGEKKQLLDLAL 339
Query: 346 INAHRSHTQKLSTEISH---QMILKDFTKKFALPHIPKRIEIYDNSHIMGCSAVGCMVVV 402
N EI ++ L++ K LP P IE +D SH+ G S VG MV
Sbjct: 340 KN----------LEIYFFGDEIKLEELKNKLHLPKPPNVIECFDISHLSGTSTVGSMVQF 389
Query: 403 GENGFVKNQYRKFNLHPNDVKTQDDCAMMRMVLERRFSQLIKNEENLNFHPKKQEYSFPS 462
K YR+F + V+ DD A + V+ RR+S+L+ EEN
Sbjct: 390 RNGKPDKKNYRRFKI--KTVEGIDDFASIAEVVRRRYSRLL--EENSEL----------- 434
Query: 463 WPDVVILDGGKGQLSAAQGVLKKLNVENRITIISIAKGPKRSAGMEKFFVKKGE-ALVLN 521
PD++++DGGKGQLS+A L+KL + +I +ISIAK E+ +V + L +
Sbjct: 435 -PDLIVIDGGKGQLSSAFKELRKLGL--KIPLISIAKRE------EEIYVPGIKNPLPIK 485
Query: 522 MRDPILYFIQRLRDEAHRFAITTHRKRRKK 551
+ F+Q +RDEAHRFAIT +R RKK
Sbjct: 486 KNEKASLFLQEIRDEAHRFAITYNRLLRKK 515