RPSBLAST alignment for GI: 255764496 and conserved domain: COG0322

>gnl|CDD|30670 COG0322, UvrC, Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair]. Length = 581
 Score =  517 bits (1334), Expect = e-147
 Identities = 250/605 (41%), Positives = 337/605 (55%), Gaps = 40/605 (6%)

Query: 7   PECPGVYQMLDIAGRVLYVGKAYNLQKRIKSYMHSNNHTHRITHMISQINNIRFTVTCTE 66
           P  PGVY M D  G VLYVGKA NL+KR+ SY        +   ++  I +I + VT TE
Sbjct: 13  PHSPGVYLMKDENGTVLYVGKAKNLRKRVSSYFRGRLD-PKTAALVENIADIEYIVTDTE 71

Query: 67  VEALLLEANMIKRLKPRFNILLRDDKSFPYILITDKHKIPALYKHRDSSTIQGSYFGPFA 126
            EALLLE N+IK+ KPR+N+LL+DDKS+PYI IT   + P +   R     +G YFGP+ 
Sbjct: 72  TEALLLENNLIKKHKPRYNVLLKDDKSYPYIKITLHEEFPRIAITRGLRKDKGKYFGPYP 131

Query: 127 SVDAVEKTINSLQRTFFLRSCADSVFRHRTRPCLLFQIKRCSGPCTGEISSEKYMEFVHE 186
           S  AV +T+N LQR F LR+C+DSV R+R RPCL +QI RC  PC G IS E+Y E V E
Sbjct: 132 SAGAVRETLNLLQRLFPLRTCSDSVKRNRRRPCLYYQIGRCLAPCVGLISEEEYREIVEE 191

Query: 187 AKKFLSGGNHNLKEKIARNMNQATLKEDYESAIIHRDRLAALSHIQNH---NDSIYNRMD 243
            K FL G +  + +++   M +A+   D+E A   RD++ AL  +Q     +      +D
Sbjct: 192 VKGFLKGKDDAVLQELEEKMEEASENLDFERAARLRDQIKALEKLQEKQAVSLFKLQDLD 251

Query: 244 CFSLYHNKNLACIQTCFFHFGQNRGTCTFFLKTDSESTNAQILSYFLRQFYTDKPCPENI 303
             +   +   AC+Q  F   G+  G   +F   +        L  F+ QFY     P+ I
Sbjct: 252 VIAGAVDGGEACVQVFFVRGGKLLGRRAYFPLENEAEEE---LEAFILQFYKSNEIPKEI 308

Query: 304 LLSEEAEETSLLEISFFKQYGYKVKITVPKQGEKRKIIEQALINAHRSHTQKLSTEISHQ 363
           LL +E  E  L E    +  G   +I VPK+GEK+ ++E A  NA  +  Q        Q
Sbjct: 309 LLPQELPEEELEEA-LSEAAGL--EIRVPKRGEKKSLLELATKNAKEALEQLKERSDEKQ 365

Query: 364 MILKDFTKKFALPHIPKRIEIYDNSHIMGCSAVGCMVVVGENGFVKNQYRKFNLHPNDVK 423
             L+       LP  P RIE +D SHI G   VG MVV  + G  K  YR++N+    + 
Sbjct: 366 -ALEALAALLGLP-APYRIECFDISHIQGEDTVGSMVVFEDGGPSKKDYRRYNI---KIT 420

Query: 424 TQDDCAMMRMVLERRFSQLIKNEENLNFHPKKQEYSFPSWPDVVILDGGKGQLSAAQGVL 483
             DD A MR VL RR+S+L+K E                 PD++++DGGKGQL+AA+ VL
Sbjct: 421 GGDDYASMREVLTRRYSRLLKEE----------------LPDLILIDGGKGQLNAAKEVL 464

Query: 484 KKLNVENRITIISIAKGPKRSAGMEKFFVKKGEALVLNMRDPILYFIQRLRDEAHRFAIT 543
           K+L ++  I +I +AKG +     E      GE   L    P LY +QR+RDEAHRFAIT
Sbjct: 465 KELGLD--IPVIGLAKGEE-----ELLLPGPGEEFDLPPNSPALYLLQRIRDEAHRFAIT 517

Query: 544 THRKRRKKAAY-SPLDEINGIGPLRKRLLLQSFGTVKMISRSSPETLASIEGISKKIACK 602
            HRK+R KA   S LD+I GIGP R++ LL+ FG++K I  +S E LA + GISKK+A K
Sbjct: 518 YHRKKRSKAMLQSSLDDIPGIGPKRRKALLKHFGSLKGIKSASVEELAKV-GISKKLAEK 576

Query: 603 IYNHF 607
           IY   
Sbjct: 577 IYEAL 581