RPSBLAST alignment for GI: 255764496 and conserved domain: COG0322
>gnl|CDD|30670 COG0322, UvrC, Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair]. Length = 581
Score = 517 bits (1334), Expect = e-147
Identities = 250/605 (41%), Positives = 337/605 (55%), Gaps = 40/605 (6%)
Query: 7 PECPGVYQMLDIAGRVLYVGKAYNLQKRIKSYMHSNNHTHRITHMISQINNIRFTVTCTE 66
P PGVY M D G VLYVGKA NL+KR+ SY + ++ I +I + VT TE
Sbjct: 13 PHSPGVYLMKDENGTVLYVGKAKNLRKRVSSYFRGRLD-PKTAALVENIADIEYIVTDTE 71
Query: 67 VEALLLEANMIKRLKPRFNILLRDDKSFPYILITDKHKIPALYKHRDSSTIQGSYFGPFA 126
EALLLE N+IK+ KPR+N+LL+DDKS+PYI IT + P + R +G YFGP+
Sbjct: 72 TEALLLENNLIKKHKPRYNVLLKDDKSYPYIKITLHEEFPRIAITRGLRKDKGKYFGPYP 131
Query: 127 SVDAVEKTINSLQRTFFLRSCADSVFRHRTRPCLLFQIKRCSGPCTGEISSEKYMEFVHE 186
S AV +T+N LQR F LR+C+DSV R+R RPCL +QI RC PC G IS E+Y E V E
Sbjct: 132 SAGAVRETLNLLQRLFPLRTCSDSVKRNRRRPCLYYQIGRCLAPCVGLISEEEYREIVEE 191
Query: 187 AKKFLSGGNHNLKEKIARNMNQATLKEDYESAIIHRDRLAALSHIQNH---NDSIYNRMD 243
K FL G + + +++ M +A+ D+E A RD++ AL +Q + +D
Sbjct: 192 VKGFLKGKDDAVLQELEEKMEEASENLDFERAARLRDQIKALEKLQEKQAVSLFKLQDLD 251
Query: 244 CFSLYHNKNLACIQTCFFHFGQNRGTCTFFLKTDSESTNAQILSYFLRQFYTDKPCPENI 303
+ + AC+Q F G+ G +F + L F+ QFY P+ I
Sbjct: 252 VIAGAVDGGEACVQVFFVRGGKLLGRRAYFPLENEAEEE---LEAFILQFYKSNEIPKEI 308
Query: 304 LLSEEAEETSLLEISFFKQYGYKVKITVPKQGEKRKIIEQALINAHRSHTQKLSTEISHQ 363
LL +E E L E + G +I VPK+GEK+ ++E A NA + Q Q
Sbjct: 309 LLPQELPEEELEEA-LSEAAGL--EIRVPKRGEKKSLLELATKNAKEALEQLKERSDEKQ 365
Query: 364 MILKDFTKKFALPHIPKRIEIYDNSHIMGCSAVGCMVVVGENGFVKNQYRKFNLHPNDVK 423
L+ LP P RIE +D SHI G VG MVV + G K YR++N+ +
Sbjct: 366 -ALEALAALLGLP-APYRIECFDISHIQGEDTVGSMVVFEDGGPSKKDYRRYNI---KIT 420
Query: 424 TQDDCAMMRMVLERRFSQLIKNEENLNFHPKKQEYSFPSWPDVVILDGGKGQLSAAQGVL 483
DD A MR VL RR+S+L+K E PD++++DGGKGQL+AA+ VL
Sbjct: 421 GGDDYASMREVLTRRYSRLLKEE----------------LPDLILIDGGKGQLNAAKEVL 464
Query: 484 KKLNVENRITIISIAKGPKRSAGMEKFFVKKGEALVLNMRDPILYFIQRLRDEAHRFAIT 543
K+L ++ I +I +AKG + E GE L P LY +QR+RDEAHRFAIT
Sbjct: 465 KELGLD--IPVIGLAKGEE-----ELLLPGPGEEFDLPPNSPALYLLQRIRDEAHRFAIT 517
Query: 544 THRKRRKKAAY-SPLDEINGIGPLRKRLLLQSFGTVKMISRSSPETLASIEGISKKIACK 602
HRK+R KA S LD+I GIGP R++ LL+ FG++K I +S E LA + GISKK+A K
Sbjct: 518 YHRKKRSKAMLQSSLDDIPGIGPKRRKALLKHFGSLKGIKSASVEELAKV-GISKKLAEK 576
Query: 603 IYNHF 607
IY
Sbjct: 577 IYEAL 581