HHsearch alignment for GI: 255764497 and conserved domain: COG1176
>COG1176 PotB ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].
Probab=99.95 E-value=9.7e-24 Score=188.70 Aligned_cols=201 Identities=17% Similarity=0.150 Sum_probs=154.5
Q ss_pred CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 20366870740689999999999999999999999999999971502-67899999999974328999999999984014
Q gi|255764497|r 49 VDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSRR-LGMVLVPILDIMQSIPILGFLTFTVVYFMNLY 127 (587)
Q Consensus 49 ~~~~~~~~~~~~l~~~~~~Tl~~~~~~~~~~~~ig~~~a~~~~~~~~-~~~~~~~~l~~~~~iP~~~~~~~~~~~f~~~~ 127 (587)
T Consensus 52 l~nY~~~~~~~~y~~v~~~Sl~iA~~~T~~~lligyP~Ay~la~~~~~~r~~ll~lvilPfwts~LiR~yawi~iL~~~G 131 (287)
T COG1176 52 LGNYARLLTDSLYLTVLLRSLWIAALVTLICLLLGYPVAYFLARSPPRWRNLLLLLVILPFWTSLLIRTYAWIVILGRNG 131 (287)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 78899976835899999999999999999999999999999996773799999999999998999999999999983477
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf --------------554210479999999998535999999999972998999999962888201236555262157899
Q gi|255764497|r 128 --------------PGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLV 193 (587)
Q Consensus 128 --------------~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~l~~i~~~l~eaa~~~Ga~~~~~f~~v~lP~~~P~i~ 193 (587)
T Consensus 132 ~iN~~L~~lGl~~~p~~ll~~~~aV~igmvy~~lPfmiLPly~al~~id~~L~eAA~dLGA~~~~~F~~VilPLs~pGi~ 211 (287)
T COG1176 132 LINQALLALGLIDEPLRLLYTETAVIIGMVYIYLPFMILPLYAALEKIDPSLLEAARDLGASPFQTFRRVILPLSLPGII 211 (287)
T ss_pred HHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHEEECCCHHHHH
T ss_conf 16488997688788679880533676899998659999999999983997899999875997654764203217718999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHH
Q ss_conf 99999999998998999997354442036788999999863-1132569999999999999
Q gi|255764497|r 194 WNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIK-EQDLLAILYAMLTMLGVIF 253 (587)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~g~g~~~~~~~~-~~~~~~~~~~~~~i~~~~~ 253 (587)
T Consensus 212 aG~~lVFi~alG~fi~P~lLGG~~~~~----ig~lI~~q~~~~~nwp~asA~sv~L~~i~~ 268 (287)
T COG1176 212 AGSLLVFIPALGSFVTPALLGGPKVLM----IGNLIYQQFLSARNWPFASALAVVLLLVVL 268 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCC----HHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 999999897758899889856975253----999999998520584478999999999999