HHsearch alignment for GI: 255764497 and conserved domain: COG1176
>COG1176 PotB ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].
Probab=99.78 E-value=2.8e-16 Score=134.55 Aligned_cols=188 Identities=12% Similarity=0.135 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------C
Q ss_conf 89999999999999999997310000112454366-789998544667754446999999999831-------------5
Q gi|255764497|r 378 YVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRP-HISSKIQPFAQLLAAFPANVFFPLVVSCVS-------------Y 443 (587)
Q Consensus 378 ~l~~~~~~tl~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~-------------~ 443 (587)
T Consensus 63 ~y~~v~~~Sl~iA~~~T~~~lligyP~Ay~la~~~~~~r~~ll~lvilPfwts~LiR~yawi~iL~~~G~iN~~L~~lGl 142 (287)
T COG1176 63 LYLTVLLRSLWIAALVTLICLLLGYPVAYFLARSPPRWRNLLLLLVILPFWTSLLIRTYAWIVILGRNGLINQALLALGL 142 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
T ss_conf 89999999999999999999999999999999677379999999999999899999999999998347716488997688
Q ss_pred CC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 56-----6504799999999999999999999997399899999997498878998999857457789999999999999
Q gi|255764497|r 444 YH-----LNPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAW 518 (587)
Q Consensus 444 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~gl~~i~~~l~eaa~~lGa~~~~~~~~V~LPl~~P~i~~g~~~a~~~a~ 518 (587)
T Consensus 143 ~~~p~~ll~~~~aV~igmvy~~lPfmiLPly~al~~id~~L~eAA~dLGA~~~~~F~~VilPLs~pGi~aG~~lVFi~al 222 (287)
T COG1176 143 IDEPLRLLYTETAVIIGMVYIYLPFMILPLYAALEKIDPSLLEAARDLGASPFQTFRRVILPLSLPGIIAGSLLVFIPAL 222 (287)
T ss_pred CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHH
T ss_conf 78867988053367689999865999999999998399789999987599765476420321771899999999989775
Q ss_pred HHHHHHHHHCCCCCCCCCCCHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999999985055644223783799999997-349798999999999999999
Q gi|255764497|r 519 NASIVSEVASWGHIHLRTTGLGAYIAESTE-KGSFPEVVLGVLIMCCFVLAL 569 (587)
Q Consensus 519 ~~~~~ae~~~~~~~~~~~~GlG~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~ 569 (587)
T Consensus 223 G~fi~P~lLGG~~----~~~ig~lI~~q~~~~~nwp~asA~sv~L~~i~~~~ 270 (287)
T COG1176 223 GSFVTPALLGGPK----VLMIGNLIYQQFLSARNWPFASALAVVLLLVVLLL 270 (287)
T ss_pred HHHHHHHHHCCCC----CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 8899889856975----25399999999852058447899999999999999