HHsearch alignment for GI: 255764497 and conserved domain: PRK09500
>PRK09500 potC spermidine/putrescine ABC transporter membrane protein; Reviewed.
Probab=99.94 E-value=9.3e-23 Score=181.59 Aligned_cols=246 Identities=17% Similarity=0.099 Sum_probs=173.8
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCC----CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 16888899-99999999999999999864102331----35203668707406899999999999999999999999999
Q gi|255764497|r 13 RRIFPNIF-DLLAFVLVIGIINILLHGIQETTVPR----DIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYA 87 (587)
Q Consensus 13 rr~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~Tl~~~~~~~~~~~~ig~~~a 87 (587)
T Consensus 3 ~r~l~~~~~~lv~~f~~~Pl~~iv~~SF~~~~~~~~~~~fTl~~y~~~f~~~~~~~~~~nSl~ia~~~~~~~~~lg~~~A 82 (257)
T PRK09500 3 GRLLRGGFMTLVYAYLYIPIIILIVNSFNSSRFGINWQGFTTKWYELLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTA 82 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 44999999999999999989999999938998788988968999999987937999999999999999999999999999
Q ss_pred HHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 999715026-7899999999974328999999999984014554210479999999998535999999999972998999
Q gi|255764497|r 88 TLAAKSRRL-GMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLE 166 (587)
Q Consensus 88 ~~~~~~~~~-~~~~~~~l~~~~~iP~~~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~l~~i~~~l~ 166 (587)
T Consensus 83 ~~l~r~~~~~~~~~~~l~~~p~~~P~~v~~i~l~~~~~~~g---~~~~~~~lil~~~~~~lP~~~~~i~~~l~~i~~~l~ 159 (257)
T PRK09500 83 VALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLG---IQLGFWSLLFAHITFCLPFVVVTVYSRLKGFDVRML 159 (257)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHH
T ss_conf 99975267745699999999999799999999999999735---132099999888885150279999999971796999
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 99996288820123655526215789999999999998998999997354442036788999999863113256999999
Q gi|255764497|r 167 EVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAML 246 (587)
Q Consensus 167 eaa~~~Ga~~~~~f~~v~lP~~~P~i~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~ 246 (587)
T Consensus 160 EAA~~lGAs~~~~f~~VilPl~~P~i~~~~il~F~~s~~ef~~~~~l~g~~~~-t---lp~~i~~~~~~~~~~~~~-Ala 234 (257)
T PRK09500 160 EAAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSFVTGPSYE-I---LPLKIYSMVKVGVSPEVN-ALA 234 (257)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE-E---HHHHHHHHHHCCCCHHHH-HHH
T ss_conf 99987299987963631298479999999999999999999999975289960-2---899999998737875999-999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999898754
Q gi|255764497|r 247 TMLGVIFLYDQLLFRPMIVW 266 (587)
Q Consensus 247 ~i~~~~~~~~~~~~~~~~~~ 266 (587)
T Consensus 235 ~il~~i~~~~~~l~~~l~r~ 254 (257)
T PRK09500 235 TILLVLSLVLVILSQLLARD 254 (257)
T ss_pred HHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999998665