HHsearch alignment for GI: 255764497 and conserved domain: PRK09881
>PRK09881 ATP-dependent peptide transporter membrane subunit; Provisional.
Probab=99.52 E-value=1.2e-10 Score=93.61 Aligned_cols=169 Identities=16% Similarity=0.140 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 6899999999999999999999999999999715-026789999999997432899999999998401455421047999
Q gi|255764497|r 60 SLPQYASRTTLRMLSAMVISLLFTFVYATLAAKS-RRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAA 138 (587)
Q Consensus 60 ~l~~~~~~Tl~~~~~~~~~~~~ig~~~a~~~~~~-~~~~~~~~~~l~~~~~iP~~~~~~~~~~~f~~~~~~~~~~~~~~~ 138 (587)
T Consensus 88 rll~G~r~sL~i~l~~~~i~~~iG~~lG~~aGy~gG~~D~il~ri~Dv~~aiP~lll~i~l~~~~g~~--------~~~~ 159 (296)
T PRK09881 88 RVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPS--------LFNA 159 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC--------HHHH
T ss_conf 98887999999999999999999999999888817607665567776301586057778887651675--------1688
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9999998535999999999-972998999999962888201236555262157899999999999989989999973544
Q gi|255764497|r 139 IFAIFTSQVWNMTFSMYQS-LCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGD 217 (587)
Q Consensus 139 i~~~~~~~~~~i~~~~~~~-l~~i~~~l~eaa~~~Ga~~~~~f~~v~lP~~~P~i~~~~~l~~~~~~~~~~~~~~~g~~~ 217 (587)
T Consensus 160 il~i~l~~w~~~aR~vR~~~l~i~~~~yV~AAr~~G~s~~~Ii~rhiLPni~~~liv~~~~~~~~aIl~ea~LsFLGlG~ 239 (296)
T PRK09881 160 MLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGA 239 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 89999987999999999999999634999999983988678541427666188999999999999999999999903789
Q ss_pred CCHHHHHHHHHHHHHHHHCC
Q ss_conf 42036788999999863113
Q gi|255764497|r 218 TVIPLPGIGSYIALAIKEQD 237 (587)
Q Consensus 218 ~~~~~~g~g~~~~~~~~~~~ 237 (587)
T Consensus 240 ~pp-~~sWG~mi~~~~~~~~ 258 (296)
T PRK09881 240 QQP-SAEWGAMVANGRNYVL 258 (296)
T ss_pred CCC-CCCHHHHHHHHHHHHH
T ss_conf 999-9859999999999998