HHsearch alignment for GI: 255764497 and conserved domain: PRK11365
>PRK11365 ssuC alkanesulfonate transporter permease subunit; Provisional.
Probab=100.00 E-value=1.3e-30 Score=238.63 Aligned_cols=187 Identities=21% Similarity=0.267 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 88999999999999999999731000011245436678999854466775444699999999983155665047999999
Q gi|255764497|r 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPHISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHLNPNLWLSLLM 456 (587)
Q Consensus 377 ~~l~~~~~~tl~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (587)
T Consensus 56 g~l~~~~~~Tl~r~~~Gf~l~~~~Gi~lGil~g~~~~~~~~~~P~~~~l~~iP~ia~~Pl~ilwfG~g~~----~~i~~i 131 (263)
T PRK11365 56 GELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDES----AKIFLV 131 (263)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHCCCCC----HHHHHH
T ss_conf 4599999999999999999999999999999998699998758599999765799999999999715742----044788
Q ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99999999999999997399899999997498878998999857457789999999999999999999985055644223
Q gi|255764497|r 457 IFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGGAWNASIVSEVASWGHIHLRT 536 (587)
Q Consensus 457 ~~~~~~~~~~~~~~gl~~i~~~l~eaa~~lGa~~~~~~~~V~LPl~~P~i~~g~~~a~~~a~~~~~~ae~~~~~~~~~~~ 536 (587)
T Consensus 132 ~~~~~~pi~~nt~~Gv~~v~~~~~~~ar~~g~s~~~~l~~V~lP~alP~i~~glria~~~a~~~~v~aE~i~------~~ 205 (263)
T PRK11365 132 ALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETIS------AN 205 (263)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------CC
T ss_conf 651042889999888754999999999872999999999989800688999999999999999999999984------46
Q ss_pred CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7837999999973497989999999999999999997
Q gi|255764497|r 537 TGLGAYIAESTEKGSFPEVVLGVLIMCCFVLALNRFL 573 (587)
Q Consensus 537 ~GlG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 573 (587)
T Consensus 206 ~GLG~~i~~a~~~~~~~~v~a~ii~i~llg~~l~~~~ 242 (263)
T PRK11365 206 SGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSA 242 (263)
T ss_pred CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9888999999987068899999999999999999999