HHsearch alignment for GI: 255764497 and conserved domain: PRK11365

>PRK11365 ssuC alkanesulfonate transporter permease subunit; Provisional.
Probab=100.00  E-value=1.4e-29  Score=231.13  Aligned_cols=240  Identities=17%  Similarity=0.219  Sum_probs=202.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             1688889999999999999999999----864102331352036687074068999999999999999999999999999
Q gi|255764497|r   13 RRIFPNIFDLLAFVLVIGIINILLH----GIQETTVPRDIVDIVPITLDVHSLPQYASRTTLRMLSAMVISLLFTFVYAT   88 (587)
Q Consensus        13 rr~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Tl~~~~~~~~~~~~ig~~~a~   88 (587)
T Consensus         6 ~rw~~r~~p~l~~v~ll~~We~~~~~~~v~~~~lP~P~~V~~~~~~l~~~g~l~~~~~~Tl~r~~~Gf~l~~~~Gi~lGi   85 (263)
T PRK11365          6 KKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGL   85 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999998999999999999999995048986589989999999998548459999999999999999999999999999


Q ss_pred             HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             99715026789999999997432899999999998401455421047999999999853599999999997299899999
Q gi|255764497|r   89 LAAKSRRLGMVLVPILDIMQSIPILGFLTFTVVYFMNLYPGKVIGAELAAIFAIFTSQVWNMTFSMYQSLCNIPRDLEEV  168 (587)
Q Consensus        89 ~~~~~~~~~~~~~~~l~~~~~iP~~~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~l~~i~~~l~ea  168 (587)
T Consensus        86 l~g~~~~~~~~~~P~~~~l~~iP~ia~~Pl~ilwfG~g--------~~~~i~~i~~~~~~pi~~nt~~Gv~~v~~~~~~~  157 (263)
T PRK11365         86 ISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGID--------ESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEM  157 (263)
T ss_pred             HHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHCCC--------CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf             99986999987585999997657999999999997157--------4204478865104288999988875499999999


Q ss_pred             HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf             99628882012365552621578999999999999899899999735444203678899999986311325699999999
Q gi|255764497|r  169 SRSFRLSGWQKFWYLGVPFSMPGLVWNMMMSMSGGWFFVVASEMIVVGDTVIPLPGIGSYIALAIKEQDLLAILYAMLTM  248 (587)
Q Consensus       169 a~~~Ga~~~~~f~~v~lP~~~P~i~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~i  248 (587)
T Consensus       158 ar~~g~s~~~~l~~V~lP~alP~i~~glria~~~a~~~~v~aE~i~~~~------GLG~~i~~a~~~~~~~~v~a~ii~i  231 (263)
T PRK11365        158 ARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANS------GIGYLAMNAREFLQTDVVVVAIILY  231 (263)
T ss_pred             HHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHCHHHHHHHHHHH
T ss_conf             9872999999999989800688999999999999999999999984469------8889999999870688999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999998987544
Q gi|255764497|r  249 LGVIFLYDQLLFRPMIVWS  267 (587)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~  267 (587)
T Consensus       232 ~llg~~l~~~~-~~lerrl  249 (263)
T PRK11365        232 ALLGKLADVSA-QLLERLW  249 (263)
T ss_pred             HHHHHHHHHHH-HHHHHHH
T ss_conf             99999999999-9999993