HHsearch alignment for GI: 255764497 and conserved domain: TIGR00974
>TIGR00974 3a0107s02c phosphate ABC transporter, permease protein PstA; InterPro: IPR005672 Bacterial binding protein-dependent transport systems , are multicomponent systems typically composed of a periplasmic substrate-binding protein, one or two reciprocally homologous integral inner-membrane proteins and one or two peripheral membrane ATP-binding proteins that couple energy to the active transport system. The integral inner-membrane proteins translocate the substrate across the membrane. It has been shown , that most of these proteins contain a conserved region located about 80 to 100 residues from their C-terminal extremity. This region seems to be located in a cytoplasmic loop between two transmembrane domains. Apart from the conserved region, the sequence of these proteins is quite divergent, and they have a variable number of transmembrane helices,; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0015114 phosphate transmembrane transporter activity, 0006817 phosphate transport, 0009276 1-2nm peptidoglycan-based cell wall.
Probab=99.77 E-value=1.4e-15 Score=129.51 Aligned_cols=170 Identities=18% Similarity=0.185 Sum_probs=139.9
Q ss_pred CCCCCCCHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 33135203668707---4068999999999999999999999999999997150---26789999999997432899999
Q gi|255764497|r 44 VPRDIVDIVPITLD---VHSLPQYASRTTLRMLSAMVISLLFTFVYATLAAKSR---RLGMVLVPILDIMQSIPILGFLT 117 (587)
Q Consensus 44 ~~~~~~~~~~~~~~---~~~l~~~~~~Tl~~~~~~~~~~~~ig~~~a~~~~~~~---~~~~~~~~~l~~~~~iP~~~~~~ 117 (587)
T Consensus 39 ~~fft~~~~~~~~~~~~~GGi~~AivGT~~~~~~~~~ia~PlGi~~aiYL~EYa~~~~~~~~ir~~~~~LaG~PSIv~GL 118 (302)
T TIGR00974 39 LEFFTSSPTPTGTEGDGEGGIGPAIVGTLLLILLAIVIAVPLGIGAAIYLAEYAKEGRFTKFIRFAVDVLAGVPSIVVGL 118 (302)
T ss_pred CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHH
T ss_conf 60045357777788888753367799999999999999999999988875530678940056878888752116999999
Q ss_pred HHHHHHHCCCC--CCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999840145--542104799999-999985359999999999729989999999628882012365552621578999
Q gi|255764497|r 118 FTVVYFMNLYP--GKVIGAELAAIF-AIFTSQVWNMTFSMYQSLCNIPRDLEEVSRSFRLSGWQKFWYLGVPFSMPGLVW 194 (587)
Q Consensus 118 ~~~~~f~~~~~--~~~~~~~~~~i~-~~~~~~~~~i~~~~~~~l~~i~~~l~eaa~~~Ga~~~~~f~~v~lP~~~P~i~~ 194 (587)
T Consensus 119 Fg~~~fv~~~~i~l~~~~S~laG~~LaLa~L~LP~iirtTeEal~~VP~~~Reas~ALGa~Kw~TI~~~vLP~A~~GI~T 198 (302)
T TIGR00974 119 FGYALFVKTLGIYLGGGFSALAGALLALAILILPVIIRTTEEALKAVPKDLREASLALGATKWQTILKIVLPAALPGILT 198 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHEEEEEEECCCHHHHHH
T ss_conf 99999997768645220677879999999999999999989999724788889999726002113322441310368999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999989989999973
Q gi|255764497|r 195 NMMMSMSGGWFFVVASEMIV 214 (587)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~g 214 (587)
T Consensus 199 G~iL~iaR~~GE-TAPLl~T 217 (302)
T TIGR00974 199 GIILSIARAAGE-TAPLLFT 217 (302)
T ss_pred HHHHHHHHHHHH-HHHHHHH
T ss_conf 999999999998-9999999