HHsearch alignment for GI: 255764497 and conserved domain: TIGR03226
>TIGR03226 PhnU 2-aminoethylphosphonate ABC transporter, permease protein. This ABC transporter permease (membrane-spanning) component is found in a region of the salmonella typhimurium LT2 genome responsible for the catabolism of 2-aminoethylphosphonate via the phnWX pathway (GenProp0238).
Probab=99.89 E-value=1.3e-19 Score=158.75 Aligned_cols=200 Identities=18% Similarity=0.078 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---------
Q ss_conf 8899999999999999999973100001124543667-899985446677544469999999998315566---------
Q gi|255764497|r 377 LYVIWLGCITMFRVVVLIIIASIIWIPVGIWIGFRPH-ISSKIQPFAQLLAAFPANVFFPLVVSCVSYYHL--------- 446 (587)
Q Consensus 377 ~~l~~~~~~tl~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~--------- 446 (587)
T Consensus 88 ~~~~~al~nTl~~a~~~t~~~lvlG~~lA~~L~r~~f~g~~~l~~ll~lp~~lP~~v~a~a~~~l~~~~G~ln~~L~~l~ 167 (312)
T TIGR03226 88 HDFRDALGNTLQIAFAAAAGALLLGSALAAILFFIPFPGAELIGRFLDLFIAFPSFLIAFAFIFIYGSAGLLNGALMRAF 167 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
T ss_conf 67999999999999999999999999999999962376289999999999998899999999999835770779999962
Q ss_pred ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ----------5047999999999999999999999973998999999974988789989998574577899999999999
Q gi|255764497|r 447 ----------NPNLWLSLLMIFGTQWYILFNVIAGASAFPNDFKEVASSFHITGWRWWRYIILPGIFPYYVTGAITACGG 516 (587)
Q Consensus 447 ----------~~~~~~~~~~~~~~~~~~~~~~~~gl~~i~~~l~eaa~~lGa~~~~~~~~V~LPl~~P~i~~g~~~a~~~ 516 (587)
T Consensus 168 gl~~~p~~~l~s~~gVvla~i~~~~Pf~~l~~~a~l~~id~~l~EAA~~lGAs~~~~Fr~VtLPll~P~i~ag~lL~Fi~ 247 (312)
T TIGR03226 168 AFDAPPLDFLFGAGGVILAEITFFTPFVMRPLLAAFAQIDKRLLEAASILGAHGLMLAGQVIFPAALPAIAAGGILCFLL 247 (312)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 86677457774099999999999899999999999996897899999884999888678742784689999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999850556442237837999999-973497989999999999999999997215789998763
Q gi|255764497|r 517 AWNASIVSEVASWGHIHLRTTGLGAYIAES-TEKGSFPEVVLGVLIMCCFVLALNRFLWHPLYLYGTRCL 585 (587)
Q Consensus 517 a~~~~~~ae~~~~~~~~~~~~GlG~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~r~ 585 (587)
T Consensus 248 ~~~~F~~~~~lgg~~~----~tl~~~Iy~~~~~~~d~~~AaAlavillv~~l~l~~l-----~r~~~rR~ 308 (312)
T TIGR03226 248 TLNEFGILLFIGAAGL----ITLPMAIYSKAILDIDLPAAAAGALIMIALSLALFAL-----YRLAARRA 308 (312)
T ss_pred HHHHHCCEEEEECCCC----EEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHC
T ss_conf 9977541134408997----0179999999987579899999999999999999999-----99998763