HHsearch alignment for GI: 255764498 and conserved domain: PRK01287

>PRK01287 xerC site-specific tyrosine recombinase XerC; Reviewed.
Probab=100.00  E-value=0  Score=444.51  Aligned_cols=287  Identities=31%  Similarity=0.435  Sum_probs=258.6

Q ss_pred             CHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC-CHHHCCHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             6466413899999999999999999754499-8688999999999999997------79984353221011233432100
Q gi|255764498|r    2 MSSERASSINTLSAYKRDLKEMQNFLNNKEI-SLSAASTNHLISYLNHLSQ------RKLVTSSQRRKISVIRQFYNFLC   74 (300)
Q Consensus         2 l~~~R~~S~~T~~~Y~~~l~~f~~~~~~~~~-~~~~i~~~~i~~~~~~l~~------~~~s~~T~~~~~~~l~~~~~~~~   74 (300)
T Consensus        34 L~-er~~S~~Ti~aY~~dL~~F~~fl~~~g~~~~~~vt~~~l~~y~~~L~~~r~~~g~~ls~~T~~r~LsalrsFf~~l~  112 (361)
T PRK01287         34 LQ-ERNWSERTLKVQTHHTYHFILWCEERGLYYAADVTRPVLERYQRYLYQYRKTNGEPLSQGTQRTQLTPLRVWFKWLT  112 (361)
T ss_pred             HH-HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             99-83998999999999999999999984899937589999999999999865406887799999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHH
Q ss_conf             012222221222212122211122-3320246999986432001256102776543110001221001343334320000
Q gi|255764498|r   75 YEGLRKDNPSDTLELPKKNHILPK-TLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHT  153 (300)
Q Consensus        75 ~~~~~~~np~~~i~~~k~~~~~~~-~ls~~e~~~ll~~~~~~~~~~~~~~~~~~R~~~il~ll~~tGlR~~Ei~~L~~~d  153 (300)
T Consensus       113 ~~~~i~~nP~~~i~~PK~~k~lP~~~Ls~~Ev~~LL~~~~-------~~~~~g~RDrAil~LLy~tGLRvsEl~~L~~~D  185 (361)
T PRK01287        113 KQNLILYNPAADIELPKLEKRLPRYILSIDETEAILAAPD-------PTTLQGLRDRALLELLWSTGIRRSELARLDLYD  185 (361)
T ss_pred             HCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCC-------CCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
T ss_conf             8799353758763277765557776799999999984745-------588065999999999999377798887166646


Q ss_pred             HHHHHHCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
Q ss_conf             0111100011-1222111110000124788753232100124-6777520012333222221111111012344201466
Q gi|255764498|r  154 LNLTERTMII-QGKGNKERLVILSPSALHALQMYKKTCSSMK-MTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQ  231 (300)
Q Consensus       154 i~~~~~~i~v-~~K~~k~R~ipi~~~~~~~l~~y~~~~~~~~-~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~gi~  231 (300)
T Consensus       186 Id~~~~~i~v~~GKG~KeR~VPl~~~~~~~L~~Yl~~~r~~~~~~~~~~~lFvs~-~G~~ls~~~v~~~vk~~~~~agi~  264 (361)
T PRK01287        186 VDGSRKTVTVRQGKGNKDRVVPLGERALVWLQRYLQQVRPQLIVNPDSGALFVAM-DGDGLQRNGITNLVGRYIRAAGIE  264 (361)
T ss_pred             CCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC-CCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf             6788883887348887400202769999999999998617641278877521288-999587899999999999980899


Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCCC
Q ss_conf             7642598858899999998588888999985589989989996459999999999828011100112
Q gi|255764498|r  232 KKNISPHIIRHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLAKKEKKH  298 (300)
Q Consensus       232 ~~~~t~H~lRht~at~l~~~G~~~~~v~~~lGH~s~~tT~~Y~~~~~~~~~~~~~~~~p~~~~~~~~  298 (300)
T Consensus       265 k-~~~pH~LRHTfAT~lL~~GadL~~VQelLGHasi~TTqiYtHv~~~~l~~v~~~~HP~~~~~~~~  330 (361)
T PRK01287        265 K-KGACHLFRHAMATQMLENGADLRWIQAMLGHASLETTQIYTQVSIRHLQAVHASTHPAEQMADEK  330 (361)
T ss_pred             C-CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf             9-99821059999999998699999999986899778999998479999999999819988898633