>cd01191 INT_phiCTX_C phiCTX phage and phage-related integrases, site-specific recombinases, DNA breaking-rejoining enzymes, C-terminal catalytic domain. This CD includes various phage and bacterial integrases, including those similar to phage integrases: Bordetella and Pseudomonas phiCTX; E. coli Rac, Qin, and Shiga toxin 2 933W; and Salmonella typhimurium LT2 Gifsy-2 and Fels-1; and a putative pore-forming cytotoxin integrase from Vibrio parahaemolyticus O3:K6.

Probab=99.97 E-value=2.9e-32 Score=206.94 Aligned_cols=167 Identities=27% Similarity=0.323 Sum_probs=126.1 Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC----------C Q ss_conf 223320246999986432001256102776543110001221001343334320000011110001112----------2 Q gi|255764498|r 97 PKTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQG----------K 166 (300) Q Consensus 97 ~~~ls~~e~~~ll~~~~~~~~~~~~~~~~~~R~~~il~ll~~tGlR~~Ei~~L~~~di~~~~~~i~v~~----------K 166 (300) T Consensus 1 p~plT~eE~~~ll~a~~~~-----------~~~~~~~~l~~~TGlR~gE~~~L~w~dId~~~~~i~v~~~~~~~~~~~~K 69 (196) T cd01191 1 PDPFTRDEFAALIEAARVC-----------QQEQNLWEFAVFTGLRPSELIALAWEDVDLERGTVYVRRALVRGIFKVPK 69 (196) T ss_pred CCCCCHHHHHHHHHHCCCC-----------HHHHHHHHHHHHHCCHHHHHHHCCHHHCCCCCCEEEEEEEEEECCCCCCC T ss_conf 9898999999999806606-----------41899999999979169999707799847568989999616845656887 Q ss_pred C-CCCCCCHHHHHHHHHHHHHHHHHCCC--------------CCCCCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHCC Q ss_conf 2-11111000012478875323210012--------------4677752001233322222--11111110123442014 Q gi|255764498|r 167 G-NKERLVILSPSALHALQMYKKTCSSM--------------KMTGNDLWLFPSSTKTGHL--SRQVFARDLKALAARAG 229 (300) Q Consensus 167 ~-~k~R~ipi~~~~~~~l~~y~~~~~~~--------------~~~~~~~~lf~~~~~~~~~--s~~~~~~~~~~~~~~~g 229 (300) T Consensus 70 t~~~~R~v~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vf~~~~~~~~~~~~~~~~~~~~~~~~~~~g 149 (196) T cd01191 70 TKAGTRDVDLNPPALAALKEQAKLTRLSRPHQITVLEREYGRTEKQKGTFVFHDPKTGEPWTYAVASRKSFWDPALKRAG 149 (196) T ss_pred CCCCCCEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC T ss_conf 78853122189999999999999850101024566653114445667745843787788865068999999999999829 Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHH-HHHHC Q ss_conf 667642598858899999998588888999985589989989-99645 Q gi|255764498|r 230 IQKKNISPHIIRHAFASHLLEGGADLRTIQILLGHTDISTTQ-IYTHL 276 (300) Q Consensus 230 i~~~~~t~H~lRht~at~l~~~G~~~~~v~~~lGH~s~~tT~-~Y~~~ 276 (300) T Consensus 150 i~--~~~~H~lRHT~aT~ll~~G~~~~~v~~~lGHss~~~T~~~Ya~~ 195 (196) T cd01191 150 IR--YRNPYQMRHTFASWMLTAGANPAFIADQMGHKSAEMVFKHYGKW 195 (196) T ss_pred CC--CCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH T ss_conf 99--67777884799999998798999999996899799999998833

HHsearch alignment for GI: 255764498 and conserved domain: cd01191