HHsearch alignment of GI: 255764498 and MMDB domain: 1z1b_A_167-356
>1z1b_A (A:167-356) Integrase; protein-DNA complex, DNA binding protein/DNA complex; HET: PTR; 3.80A {Enterobacteria phage lambda}
Probab=99.92 E-value=1.7e-26 Score=173.04 Aligned_cols=175 Identities=15% Similarity=0.103 Sum_probs=121.8
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC-
Q ss_conf 1222111223320246999986432001256102776543110001221001343334320000011110001112221-
Q gi|255764498|r 90 PKKNHILPKTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGN- 168 (300)
Q Consensus 90 ~k~~~~~~~~ls~~e~~~ll~~~~~~~~~~~~~~~~~~R~~~il~ll~~tGlR~~Ei~~L~~~di~~~~~~i~v~~K~~- 168 (300)
|+.+++.+++++++|+.++++++... ..++++++.++++||||+||+++|+|+||++++..+.+...++
T Consensus 4 ~k~~~~~~~~lt~eei~~l~~~~~~~----------~~~~~~~~~l~~~tGlR~~E~~~l~~~di~~~~~~~~~~~~~~~ 73 (190)
T 1z1b_A 4 AAKSKVRRSRLTADEYLKIYQAAESS----------PCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVK 73 (190)
T ss_dssp CCCCCCCBCCCCHHHHHHHHHHTTSS----------CHHHHHHHHHHHHHCCCHHHHTTCBGGGEETTEEEEECTTTCCE
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCCC----------CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 22334433222036676642012245----------50245788999874124466433332212232222223444330
Q ss_pred CCCCC--HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC-CCCCCHHHHHHHHH
Q ss_conf 11110--0001247887532321001246777520012333222221111111012344201466-76425988588999
Q gi|255764498|r 169 KERLV--ILSPSALHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQ-KKNISPHIIRHAFA 245 (300)
Q Consensus 169 k~R~i--pi~~~~~~~l~~y~~~~~~~~~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~gi~-~~~~t~H~lRht~a 245 (300)
....+ +.+......+..+. .........++|++.. ++..........+..+.+.++.. ....++|.+|||+|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~t~a 148 (190)
T 1z1b_A 74 IAIPTALHIDALGISMKETLD----KCKEILGGETIIASTR-REPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLS 148 (190)
T ss_dssp EEEETTCEETTTTEEHHHHHH----HHHHHTCSSBSSCCTT-SCCCCHHHHHHHHHHHHHHHTCCCSSBCCCTTHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHH----HCCCCCCCCEEECCCC-CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf 212554210256776544333----1034577731411556-77578889999999999985999788999748289999
Q ss_pred HHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCHH
Q ss_conf 9999858888899998558998998999645999
Q gi|255764498|r 246 SHLLEGGADLRTIQILLGHTDISTTQIYTHLLPD 279 (300)
Q Consensus 246 t~l~~~G~~~~~v~~~lGH~s~~tT~~Y~~~~~~ 279 (300)
|.|+++|+|+..||++|||+|++||++|.+...+
T Consensus 149 t~l~~~g~~~~~i~~~lGH~~~~~T~~yy~~~~~ 182 (190)
T 1z1b_A 149 ARLYEKQISDKFAQHLLGHKSDTMASQXRDDRGR 182 (190)
T ss_dssp HHHHHHHTCHHHHHHHHTCSSHHHHHHHTCCTTS
T ss_pred HHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCHH
T ss_conf 9999869999999998389988999988327487