HHsearch alignment of GI: 255764498 and MMDB domain: 2kd1_A_
>2kd1_A (A:) DNA integration/recombination/invertion protein; protein structure initiative, structural genomics, unknown function, PSI-2; HET: DNA; NMR {Bacillus cereus atcc 14579}
Probab=99.58 E-value=3.3e-15 Score=107.32 Aligned_cols=98 Identities=21% Similarity=0.202 Sum_probs=91.2
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 64138999999999999999997544998688999999999999997799843532210112334321000122222212
Q gi|255764498|r 5 ERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQRRKISVIRQFYNFLCYEGLRKDNPS 84 (300)
Q Consensus 5 ~R~~S~~T~~~Y~~~l~~f~~~~~~~~~~~~~i~~~~i~~~~~~l~~~~~s~~T~~~~~~~l~~~~~~~~~~~~~~~np~ 84 (300)
++++|++|++.|+..++.|..|+. .+.++.+|+..++++|+.++..+|++++|+++.++.|++||+||++.|++..||+
T Consensus 20 ~~~~s~~T~~~y~~~l~~~~~~~~-~~~~i~~i~~~~i~~~~~~l~~~g~s~~t~~~~~~~l~~~~~~a~~~~~i~~nP~ 98 (118)
T 2kd1_A 20 RHSVGIQTAKVLKGYLNSRIIPSL-GNIKLAKLTSLHMQNYVNSLRDEGLKRGTIEKIIKVIRNSLEHAIDLELITKNVA 98 (118)
T ss_dssp HHHHCHHHHHHHHHHHTTTHHHHT-TSSBGGGCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTSCSSCTT
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHH-CCEEHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf 473899999999999998762885-7807999899999999999886314899999999999999999998889563918
Q ss_pred CCCCCCCCCCCCCCCCCCH
Q ss_conf 2221212221112233202
Q gi|255764498|r 85 DTLELPKKNHILPKTLHKD 103 (300)
Q Consensus 85 ~~i~~~k~~~~~~~~ls~~ 103 (300)
.+++.|+.+++.++++|+|
T Consensus 99 ~~i~~~k~~~~~~~~lt~E 117 (118)
T 2kd1_A 99 AKTKLPKADKEELEHHHHH 117 (118)
T ss_dssp TTCCCCSCCCCSSSCCCCC
T ss_pred HHCCCCCCCCCCCCCCCCC
T ss_conf 4192899999751023667