HHsearch results for GI: 255764498 and protein with PDBid: 1a31_A

>1a31_A Protein (topoisomerase I); topoisomerase I/DNA, DNA, isomerase/DNA complex; HET: DNA 5IU PTR; 2.10A {Homo sapiens} SCOP: d.163.1.2 e.15.1.1 PDB: 1k4t_A* 1k4s_A* 1sc7_A* 1t8i_A* 1tl8_A* 1seu_A* 1a35_A* 1a36_A* 1r49_A* 1rrj_A* 1nh3_A* 1lpq_A* 1rr8_C* 1ej9_A*
Probab=93.82  E-value=0.15  Score=27.06  Aligned_cols=117  Identities=21%  Similarity=0.343  Sum_probs=71.2

Q ss_pred             HCCCHHHHHCCCCC------C------CCCCCHHHHHHH------HHCCCC--CCCCCCC--CCCHHHHHHHHHHHHHHH
Q ss_conf             10001221001343------3------343200000111------100011--1222111--110000124788753232
Q gi|255764498|r  131 LLIELLYATGMRVS------E------LVTLSAHTLNLT------ERTMII--QGKGNKE--RLVILSPSALHALQMYKK  188 (300)
Q Consensus       131 ~il~ll~~tGlR~~------E------i~~L~~~di~~~------~~~i~v--~~K~~k~--R~ipi~~~~~~~l~~y~~  188 (300)
                      +++.|+-.+.+|+|      |      +|.|+..+|.+.      ++.+.+  .||.+..  ..|++++.+...|..+..
T Consensus       303 ~av~LID~lalRVGNEky~~EnadTvG~tTLR~eHV~l~~e~~~~~~~i~fdFlGKdgir~~~~V~vd~~v~knLk~~~~  382 (591)
T 1a31_A          303 VALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHINLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFME  382 (591)
T ss_dssp             HHHHHHHHHCCCCCCCCCTTTSCCCCCGGGCBGGGCCEEEEETTEEEEEEEEEECGGGCEEEEEEECCHHHHHHHHHTTT
T ss_pred             HHHHHHHHHCCCCCCHHHHHHCCCCEEECCCCHHHEEEECCCCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHH
T ss_conf             99999987433047754453349977432473866353045567786389986067771676673479999999999986


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC--------CCCH-----
Q ss_conf             100124677752001233322222111111101234420146676425988588999999985--------8888-----
Q gi|255764498|r  189 TCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHIIRHAFASHLLEG--------GADL-----  255 (300)
Q Consensus       189 ~~~~~~~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~gi~~~~~t~H~lRht~at~l~~~--------G~~~-----  255 (300)
                      .    ..+  ...||-      .++...++..++.+    +   +++|...||=-.||..+..        +.++     
T Consensus       383 ~----K~p--~d~LF~------~I~s~~VN~yLke~----m---~glTAKdFRTwnAS~tl~~~L~el~~~~~sv~eK~~  443 (591)
T 1a31_A          383 N----KQP--EDDLFD------RLNTGILNKHLQDL----M---EGLTAKVFRTYNASITLQQQLKELTAPDENIPAKIL  443 (591)
T ss_dssp             T----CCT--TSBTTT------TCCHHHHHHHHHHH----S---TTCCHHHHHHHHHHHHHHHHHHHHCCTTCCHHHHHH
T ss_pred             C----CCC--CCCCCC------CCCHHHHHHHHHHH----C---CCCCEEHHHHCCHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf             6----897--012443------28868889999986----4---897400110101589999999857899999999999


Q ss_pred             ------HHHHHHHCCCC
Q ss_conf             ------89999855899
Q gi|255764498|r  256 ------RTIQILLGHTD  266 (300)
Q Consensus       256 ------~~v~~~lGH~s  266 (300)
                            ..|+-+++|+.
T Consensus       444 ~yn~ANr~VAILCNHQR  460 (591)
T 1a31_A          444 SYNRANRAVAILCNHQR  460 (591)
T ss_dssp             HHHHHHHHC--------
T ss_pred             HHHHHHHHHHHHHCCCC
T ss_conf             99999999999708988