HHsearch results for GI: 255764498 and protein with PDBid: 1z19_A
>1z19_A Integrase; protein-DNA complex, DNA binding protein/DNA complex; HET: PTR; 2.80A {Enterobacteria phage lambda} PDB: 1p7d_A*
Probab=100.00 E-value=1e-40 Score=254.85 Aligned_cols=251 Identities=18% Similarity=0.178 Sum_probs=194.6
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 66413899999999999999999754499868899999999999999779984353221011233432100012222221
Q gi|255764498|r 4 SERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQRRKISVIRQFYNFLCYEGLRKDNP 83 (300)
Q Consensus 4 ~~R~~S~~T~~~Y~~~l~~f~~~~~~~~~~~~~i~~~~i~~~~~~l~~~~~s~~T~~~~~~~l~~~~~~~~~~~~~~~np 83 (300)
..+++|++|+++|...++.|..|+++ .++.+++..++.+|+.++.+++ +++|+++.++.|++||+||++.|+++.||
T Consensus 15 ~~~~l~~~T~~~y~~~l~~~~~~~g~--~~l~~it~~~i~~~~~~~~~~~-~~~t~~~~~~~l~~~~~~a~~~~~i~~np 91 (283)
T 1z19_A 15 ASRGIKQKTLINYMSKIKAIRRGLPD--APLEDITTKEIAAMLNGYIDEG-KAASAKLIRSTLSDAFREAIAEGHITTNH 91 (283)
T ss_dssp HHSCCCHHHHHHHHHHHHHHHHHSCS--CBGGGCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHTTSCSCCT
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHCC--CCHHHCCHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 87699999999999999999999769--9968799999999999999858-99999999999999999999859865481
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 22221212221112233202469999864320012561027765431100012210013433343200000111100011
Q gi|255764498|r 84 SDTLELPKKNHILPKTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMII 163 (300)
Q Consensus 84 ~~~i~~~k~~~~~~~~ls~~e~~~ll~~~~~~~~~~~~~~~~~~R~~~il~ll~~tGlR~~Ei~~L~~~di~~~~~~i~v 163 (300)
+..++.++... ..++++.+|+.++++.+.... . ...+++.+++.||||++|+++|+|+||+. +.+.|
T Consensus 92 ~~~~~~~~~~~-~~~~lt~~e~~~i~~~~~~~~------~----~~~~~~~l~~~tG~R~~Ei~~L~~~di~~--~~~~i 158 (283)
T 1z19_A 92 VAATRAAKSKV-RRSRLTADEYLKIYQAAESSP------C----WLRLAMELAVVTGQRVGDLCEMKWSDIVD--GYLYV 158 (283)
T ss_dssp TTTSCCCCCCC-CCCCCCHHHHHHHHHHGGGSC------H----HHHHHHHHHHHSCCCHHHHTTCBGGGEET--TEEEE
T ss_pred HHHCCCCCCCC-CCCCCCHHHHHHHHHHHHCCC------H----HHHHHHHHHHHHCCCHHHHHCCCHHHHCC--CEEEE
T ss_conf 76500553477-777688999999999871488------8----99999999999787865575192999218--80499
Q ss_pred -CCCCCCCCCCHHHHHHHHH---HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC--CCCCH
Q ss_conf -1222111110000124788---75323210012467775200123332222211111110123442014667--64259
Q gi|255764498|r 164 -QGKGNKERLVILSPSALHA---LQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQK--KNISP 237 (300)
Q Consensus 164 -~~K~~k~R~ipi~~~~~~~---l~~y~~~~~~~~~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~gi~~--~~~t~ 237 (300)
..|+++.+.+|++.....+ +.+++...... ....++|+. ..+++++..++...++++++.+|+.. ..+++
T Consensus 159 ~~~K~~~~~~~p~~~~~~~l~~~l~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T 1z19_A 159 EQSKTGVKIAIPTALHIDALGISMKETLDKCKEI---LGGETIIAS-TRREPLSSGTVSRYFMRARKASGLSFEGDPPTF 234 (283)
T ss_dssp ECTTTCCEEEEETTCEETTTTEEHHHHHHHHHHH---HCSSBSSCC-TTSSCCCHHHHHHHHHHHHHHTTCCCSSSCCCG
T ss_pred EECCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC---CCCCCEEEE-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 8668884246107387899999888888753035---777402320-132446715799999999998088767999972
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 88588999999985888889999855899899899964
Q gi|255764498|r 238 HIIRHAFASHLLEGGADLRTIQILLGHTDISTTQIYTH 275 (300)
Q Consensus 238 H~lRht~at~l~~~G~~~~~v~~~lGH~s~~tT~~Y~~ 275 (300)
|+|||++ |.++++|+|+..||++|||+|++||++|.+
T Consensus 235 H~lR~~~-~~l~~~g~~~~~i~~~lGH~~~~~t~~Y~~ 271 (283)
T 1z19_A 235 HELRSLS-ARLYEKQISDKFAQHLLGHKSDTMASQYRD 271 (283)
T ss_dssp GGHHHHH-HHHHHHHTCHHHHHHHHTCSSSCC------
T ss_pred CHHHHHH-HHHHHCCCCHHHHHHHHCCCCHHHHHHHHH
T ss_conf 8599999-999986989999999838998899999842