HHsearch results for GI: 255764498 and protein with PDBid: 2h7g_X

>2h7g_X DNA topoisomerase 1; type IB topoisomerase, DNA binding, protein-DNA complex, isomerase/DNA complex; HET: DNA; 1.90A {Variola virus} PDB: 2h7f_X* 3igc_A* 1a41_A
Probab=97.07  E-value=0.0017  Score=38.27  Aligned_cols=124  Identities=17%  Similarity=0.222  Sum_probs=75.3

Q ss_pred             HHCCCHHHHHCCCCCC-----------CCCCCHHHHHHHHHCCCC--CCCCCCCCCCHH--HHHHHHHHHHHHHHHCCCC
Q ss_conf             1100012210013433-----------343200000111100011--122211111000--0124788753232100124
Q gi|255764498|r  130 FLLIELLYATGMRVSE-----------LVTLSAHTLNLTERTMII--QGKGNKERLVIL--SPSALHALQMYKKTCSSMK  194 (300)
Q Consensus       130 ~~il~ll~~tGlR~~E-----------i~~L~~~di~~~~~~i~v--~~K~~k~R~ipi--~~~~~~~l~~y~~~~~~~~  194 (300)
                      .+++.|+-.|.+|+|-           ++.|+..+|.++++.+.+  .||.|+.+.+-|  .+.+...|....      .
T Consensus       118 A~~v~Lld~~~iRVGne~Ya~~N~SyGlTTLr~rHV~v~g~~i~f~F~GK~Gv~~~~~i~~d~~l~~~l~~~~------~  191 (314)
T 2h7g_X          118 AVFMLMETMFFIRFGKMKYLKENETVGLLTLKNKHIEISPDKIVIKFVGKDKVSHEFVVHKSNRLYKPLLKLT------D  191 (314)
T ss_dssp             HHHHHHHHHHCCCCCCHHHHHHHCCCCSTTCBGGGEEEETTEEEEEEECGGGCEEEEEEETTSTTHHHHHHHC------C
T ss_pred             HHHHHHHHHHCEECCCHHHHHCCCCCCEEEEECCCEEEECCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHH------H
T ss_conf             9999999862241577432220598150020101177879979999875888458999626589999999997------5


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC--------CC-----------CH
Q ss_conf             677752001233322222111111101234420146676425988588999999985--------88-----------88
Q gi|255764498|r  195 MTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHIIRHAFASHLLEG--------GA-----------DL  255 (300)
Q Consensus       195 ~~~~~~~lf~~~~~~~~~s~~~~~~~~~~~~~~~gi~~~~~t~H~lRht~at~l~~~--------G~-----------~~  255 (300)
                      .++...++|-.      ++.+.++..++    ..     .+|..+||--.||.++..        ..           -+
T Consensus       192 ~~~~~~~lf~~------v~~~~vn~~l~----~~-----~~taKdFRTw~at~~a~~~l~~~~~~~~~~~~~kk~i~~~i  256 (314)
T 2h7g_X          192 DSSPEEFLFNK------LSERKVYESIK----QF-----GIRIKDLRTYGVNYTFLYNFWTNVKSISPLPSPKKLIALTI  256 (314)
T ss_dssp             TTCTTSBSSTT------CCHHHHHHHHG----GG-----TSCHHHHHHHHHHHHHHHHHHHHHHHCSSCCCHHHHHHHHH
T ss_pred             CCCCHHEEEEE------CCCHHHHHHHH----HC-----CCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf             57810157544------46267899888----35-----84078898646259999999851676675678899999999


Q ss_pred             HHHHHHHCCCCHHHHH-HHHH
Q ss_conf             8999985589989989-9964
Q gi|255764498|r  256 RTIQILLGHTDISTTQ-IYTH  275 (300)
Q Consensus       256 ~~v~~~lGH~s~~tT~-~Y~~  275 (300)
                      ..|++.|||+- ++.. -|+|
T Consensus       257 ~~vA~~LgNTp-aVcR~sYIh  276 (314)
T 2h7g_X          257 KQTAEVVGHTP-SISKRAYMA  276 (314)
T ss_dssp             HHHHHHHTCCT-TTHHHHSTH
T ss_pred             HHHHHHHCCCH-HHHHHHCCC
T ss_conf             99999838975-555674579