HHsearch results for GI: 255764498 and protein with PDBid: 2kd1_A
>2kd1_A DNA integration/recombination/invertion protein; protein structure initiative, structural genomics, unknown function, PSI-2; HET: DNA; NMR {Bacillus cereus atcc 14579}
Probab=99.22 E-value=1.7e-11 Score=84.91 Aligned_cols=89 Identities=22% Similarity=0.218 Sum_probs=77.9
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 41389999999999999999975449986889999999999999977998435322101123343210001222222122
Q gi|255764498|r 6 RASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQRRKISVIRQFYNFLCYEGLRKDNPSD 85 (300)
Q Consensus 6 R~~S~~T~~~Y~~~l~~f~~~~~~~~~~~~~i~~~~i~~~~~~l~~~~~s~~T~~~~~~~l~~~~~~~~~~~~~~~np~~ 85 (300)
.+++++|++.|+..++.++.... .+..+.+++..++..|+..+.+++++++|+++.++.|+++|+||++.|++..||+.
T Consensus 21 ~~~~~~T~~~y~~~~~~~i~~~~-g~~~l~~i~~~~i~~~~~~~~~~~~s~~t~~~~~~~l~~~~~~Av~~~~i~~NP~~ 99 (118)
T 2kd1_A 21 HSVGIQTAKVLKGYLNSRIIPSL-GNIKLAKLTSLHMQNYVNSLRDEGLKRGTIEKIIKVIRNSLEHAIDLELITKNVAA 99 (118)
T ss_dssp HHHCHHHHHHHHHHHTTTHHHHT-TSSBGGGCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTSCSSCTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH-CCCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf 72899999999999999999986-88769998999999998740001158999999999999999999988693539363
Q ss_pred CCCCCCCCCC
Q ss_conf 2212122211
Q gi|255764498|r 86 TLELPKKNHI 95 (300)
Q Consensus 86 ~i~~~k~~~~ 95 (300)
+++.|+..++
T Consensus 100 ~ik~pk~~kk 109 (118)
T 2kd1_A 100 KTKLPKADKE 109 (118)
T ss_dssp TCCCCSCCCC
T ss_pred CCCCCCCCCC
T ss_conf 0938999986