HHsearch results for GI: 255764498 and protein with PDBid: 2kj9_A
>2kj9_A Integrase; DNA_BRE_C superfamily, INTB, PSI-2, structural genomics, protein structure initiative; NMR {Pectobacterium atrosepticum}
Probab=98.46 E-value=1.1e-07 Score=62.67 Aligned_cols=82 Identities=11% Similarity=0.066 Sum_probs=68.2
Q ss_pred HHHCCHHHHHHHHHHHHHHH-HHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 64138999999999999999-99754499868899999999999999779984353221011233432100012222221
Q gi|255764498|r 5 ERASSINTLSAYKRDLKEMQ-NFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQRRKISVIRQFYNFLCYEGLRKDNP 83 (300)
Q Consensus 5 ~R~~S~~T~~~Y~~~l~~f~-~~~~~~~~~~~~i~~~~i~~~~~~l~~~~~s~~T~~~~~~~l~~~~~~~~~~~~~~~np 83 (300)
....|+.|.+.|.+.++.++ .+++ +.++.+|+..++..++..+.++| ++.|+++.++.|+++|+||+..|+++.||
T Consensus 24 k~~~~~~t~~~~~~~l~~~i~P~~G--~~~i~~It~~~i~~~l~~i~~~g-~~~ta~r~~~~l~~if~~Av~~g~i~~NP 100 (118)
T 2kj9_A 24 KTTWSEDYQRSVWTRLETYLFPDIG--NKDIAELDTGDLLVPIKKIEKLG-YLEIAMRVKQYATAIMRYAVQQKMIRFNP 100 (118)
T ss_dssp CCSSCHHHHHHHHHHHHHTSSTTGG--GSBGGGCCHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHHTTSSSSCH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHC--CCCHHHHCHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 6888887999999999978889858--85699955599999999999935-88999999999999999999878833385
Q ss_pred CCCCCC
Q ss_conf 222212
Q gi|255764498|r 84 SDTLEL 89 (300)
Q Consensus 84 ~~~i~~ 89 (300)
+.+++.
T Consensus 101 ~~~i~~ 106 (118)
T 2kj9_A 101 AYDLEG 106 (118)
T ss_dssp HHHCCS
T ss_pred HHHHHH
T ss_conf 888987