HHsearch results for GI: 255764498 and protein with PDBid: 2kj9_A

>2kj9_A Integrase; DNA_BRE_C superfamily, INTB, PSI-2, structural genomics, protein structure initiative; NMR {Pectobacterium atrosepticum}
Probab=98.46  E-value=1.1e-07  Score=62.67  Aligned_cols=82  Identities=11%  Similarity=0.066  Sum_probs=68.2

Q ss_pred             HHHCCHHHHHHHHHHHHHHH-HHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             64138999999999999999-99754499868899999999999999779984353221011233432100012222221
Q gi|255764498|r    5 ERASSINTLSAYKRDLKEMQ-NFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQRRKISVIRQFYNFLCYEGLRKDNP   83 (300)
Q Consensus         5 ~R~~S~~T~~~Y~~~l~~f~-~~~~~~~~~~~~i~~~~i~~~~~~l~~~~~s~~T~~~~~~~l~~~~~~~~~~~~~~~np   83 (300)
                      ....|+.|.+.|.+.++.++ .+++  +.++.+|+..++..++..+.++| ++.|+++.++.|+++|+||+..|+++.||
T Consensus        24 k~~~~~~t~~~~~~~l~~~i~P~~G--~~~i~~It~~~i~~~l~~i~~~g-~~~ta~r~~~~l~~if~~Av~~g~i~~NP  100 (118)
T 2kj9_A           24 KTTWSEDYQRSVWTRLETYLFPDIG--NKDIAELDTGDLLVPIKKIEKLG-YLEIAMRVKQYATAIMRYAVQQKMIRFNP  100 (118)
T ss_dssp             CCSSCHHHHHHHHHHHHHTSSTTGG--GSBGGGCCHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHHTTSSSSCH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHC--CCCHHHHCHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             6888887999999999978889858--85699955599999999999935-88999999999999999999878833385


Q ss_pred             CCCCCC
Q ss_conf             222212
Q gi|255764498|r   84 SDTLEL   89 (300)
Q Consensus        84 ~~~i~~   89 (300)
                      +.+++.
T Consensus       101 ~~~i~~  106 (118)
T 2kj9_A          101 AYDLEG  106 (118)
T ss_dssp             HHHCCS
T ss_pred             HHHHHH
T ss_conf             888987