RPSBLAST alignment for GI: 255764498 and conserved domain: cd00799

>gnl|CDD|29500 cd00799, INT_Cre, Cre recombinase, C-terminal catalytic domain. Cre-like recombinases belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The bacteriophage P1 Cre recombinase maintains the circular phage replicon in a monomeric state by catalyzing a site-specific recombination between two loxP sites. The catalytic core domain of Cre recombinase is linked to a more divergent helical N-terminal domain, which interacts primarily with the DNA major groove proximal to the crossover region.. Length = 287
 Score = 60.7 bits (147), Expect = 4e-10
 Identities = 57/286 (19%), Positives = 94/286 (32%), Gaps = 38/286 (13%)

Query: 11  NTLSAYKRDLKEMQNFL---NNKEISLSAASTNHLISYLNHLSQRKLVTSSQRRKISVIR 67
           NT  AY  D +    +        +  S  +   +  YL  L+      S+  R++S + 
Sbjct: 2   NTRKAYLSDWRRFAAWCQAHGRTPLPASPET---VTLYLTDLADSLAP-STISRRLSALS 57

Query: 68  QFYNFLCYEGLRKDNP-SDTLELPKKNHILPK----TLHKDTIANLLEQAKIEAENPAPG 122
           Q +                 L   ++    PK     +  + +  L              
Sbjct: 58  QLHRRSGLPSPADSPLVRLVLRGIRREEARPKRQALAILPEDLDKLRSLLDESDTL---- 113

Query: 123 QWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMII----QGKGNKERL--VILS 176
             + +R   L+ L +A  +R SELV L    L  T+   ++    + K ++  L  + L 
Sbjct: 114 --RDLRDLALLLLGFAGLLRRSELVRLRWEDLTFTDGGGLLVTLRRSKTDQSGLGVLKLI 171

Query: 177 PSALH----ALQMYKKTCSSMKMTGNDLWLFPSSTKTG-----HLSRQVFARDLKALAAR 227
           P        AL+ + +     K       LF    + G      LS     R LK LA  
Sbjct: 172 PPLTTCPVRALERWLEAARIPKG-----PLFRRIDRWGVLGPGALSDNSLNRILKRLAEA 226

Query: 228 AGIQKKNISPHIIRHAFASHLLEGGADLRTIQILLGHTDISTTQIY 273
           AG++  + S H +R  FA+     G  L  I              Y
Sbjct: 227 AGLRSGSWSGHSLRRGFATEAARAGYSLLEIMRQGRWRSPKMVSRY 272