RPSBLAST alignment for GI: 255764498 and conserved domain: cd00799
>gnl|CDD|29500 cd00799, INT_Cre, Cre recombinase, C-terminal catalytic domain. Cre-like recombinases belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The bacteriophage P1 Cre recombinase maintains the circular phage replicon in a monomeric state by catalyzing a site-specific recombination between two loxP sites. The catalytic core domain of Cre recombinase is linked to a more divergent helical N-terminal domain, which interacts primarily with the DNA major groove proximal to the crossover region.. Length = 287
Score = 60.7 bits (147), Expect = 4e-10
Identities = 57/286 (19%), Positives = 94/286 (32%), Gaps = 38/286 (13%)
Query: 11 NTLSAYKRDLKEMQNFL---NNKEISLSAASTNHLISYLNHLSQRKLVTSSQRRKISVIR 67
NT AY D + + + S + + YL L+ S+ R++S +
Sbjct: 2 NTRKAYLSDWRRFAAWCQAHGRTPLPASPET---VTLYLTDLADSLAP-STISRRLSALS 57
Query: 68 QFYNFLCYEGLRKDNP-SDTLELPKKNHILPK----TLHKDTIANLLEQAKIEAENPAPG 122
Q + L ++ PK + + + L
Sbjct: 58 QLHRRSGLPSPADSPLVRLVLRGIRREEARPKRQALAILPEDLDKLRSLLDESDTL---- 113
Query: 123 QWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMII----QGKGNKERL--VILS 176
+ +R L+ L +A +R SELV L L T+ ++ + K ++ L + L
Sbjct: 114 --RDLRDLALLLLGFAGLLRRSELVRLRWEDLTFTDGGGLLVTLRRSKTDQSGLGVLKLI 171
Query: 177 PSALH----ALQMYKKTCSSMKMTGNDLWLFPSSTKTG-----HLSRQVFARDLKALAAR 227
P AL+ + + K LF + G LS R LK LA
Sbjct: 172 PPLTTCPVRALERWLEAARIPKG-----PLFRRIDRWGVLGPGALSDNSLNRILKRLAEA 226
Query: 228 AGIQKKNISPHIIRHAFASHLLEGGADLRTIQILLGHTDISTTQIY 273
AG++ + S H +R FA+ G L I Y
Sbjct: 227 AGLRSGSWSGHSLRRGFATEAARAGYSLLEIMRQGRWRSPKMVSRY 272