RPSBLAST alignment for GI: 255764498 and conserved domain: cd01187

>gnl|CDD|29508 cd01187, INT_SG4, INT_SG4, DNA breaking-rejoining enzymes, integrase/recombinases subgroup 4, N- and C-terminal domains. The CD contains mainly predicted bacterial integrase/recombinases for which not much biochemical characterization is available.. Length = 299
 Score = 85.3 bits (211), Expect = 2e-17
 Identities = 57/238 (23%), Positives = 93/238 (39%), Gaps = 15/238 (6%)

Query: 57  SSQRRKISVIRQFYNFLCYEGLRKDNPSDTLELPKKNHILPKTLHKDTIANLLEQAKIEA 116
           ++   ++ V+R+F         R + P   L   +     P     + I  LL  A    
Sbjct: 59  ATWAGRLGVVRRFARHRRRADPRTEVPPADLFPRRPRRPTPYIYTDEEIQRLLAAA---L 115

Query: 117 ENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMII-QGKGNKERLVIL 175
           + P     +      L  LL  TG+R+ E + L    ++L    + +   K  K RLV L
Sbjct: 116 QLPPTSGLRPWTYRTLFGLLAVTGLRLGEALRLRLSDVDLDSGILTVRDSKFGKSRLVPL 175

Query: 176 SPSALHALQMYKKTCSSMKMTGNDLWLFPSSTKT--GHLSRQVFARDLKALAARAGIQK- 232
             S   AL+ Y      +    +    F SS      +   +VF    + +  R   Q+ 
Sbjct: 176 HASTRAALRDYLARRDRLLPAPDSSAFFVSSRGGRLSYGGHRVFYALSREIGLRGWAQRG 235

Query: 233 KNISPHIIRHAFASHLL----EGGADL-RTIQIL---LGHTDISTTQIYTHLLPDKLQ 282
           +    H +RH FA   L      GAD+ R + +L   LGH +I+ T  Y H  P+ ++
Sbjct: 236 RGPRLHDLRHRFAVTRLTRWYRAGADVERKLPVLATYLGHANITDTYWYLHASPELME 293