RPSBLAST alignment for GI: 255764498 and conserved domain: cd01188

>gnl|CDD|29509 cd01188, INT_pAE1, pAE1 and related integrases, DNA breaking-rejoining enzymes, integrase/recombinases, C-terminal domain. This CD includes various bacterial integrases, including the predicted integrase of the deletion-prone region of plasmid pAE1 of Alcaligenes eutrophus H1.. Length = 188

 Score = 71.8 bits (176), Expect = 2e-13
 Identities = 54/210 (25%), Positives = 82/210 (39%), Gaps = 41/210 (19%)

Query: 96  LPKTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLN 155
           LP+ L  + +  LL  A  +   P     +R    LL  LL   G+R  E+  L    ++
Sbjct: 1   LPRALPWEDVERLL--ASCDRSTPVG---RRDYAILL--LLARLGLRAGEVAALRLDDID 53

Query: 156 LTERTMII-QGKGNKERLVILSPSALHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSR 214
               T+ + QGKG +   + L      AL  Y             L     +T     SR
Sbjct: 54  WRTGTIRVRQGKGGRVTRLPLPAEVGAALADY-------------LRDGRPATD----SR 96

Query: 215 QVFARDL----------------KALAARAGIQKKNISPHIIRHAFASHLLEGGADLRTI 258
           +VF R                  +    RAGI  +    H++RH+ A+ LL  GA L+ I
Sbjct: 97  RVFLRMRAPFRPFAGHSAVSNIVRRALRRAGISPRRGGAHLLRHSLATRLLRAGAPLKEI 156

Query: 259 QILLGHTDISTTQIYTHLLPDKLQKLVQDY 288
             +LGH    +T IY  +  D L+ +   +
Sbjct: 157 GDVLGHRSPDSTAIYAKVDVDALRAIALPW 186