RPSBLAST alignment of GI: 255764498 and protein with PDBid: 1z1b

>1z1b_A Integrase; protein-DNA complex, DNA binding protein/DNA complex; HET: PTR; 3.80A {Enterobacteria phage lambda} SCOP: d.10.1.4 d.163.1.1 PDB: 1z1g_A 1kjk_A 2wcc_3* Length = 356

 Score = 83.8 bits (205), Expect = 4e-17
 Identities = 45/284 (15%), Positives = 87/284 (30%), Gaps = 19/284 (6%)

Query: 4   SERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQRRKI 63
           + R     TL  Y   +K ++  L +    L   +T  + + LN         +S +   
Sbjct: 88  ASRGIKQKTLINYMSKIKAIRRGLPDA--PLEDITTKEIAAMLNGYIDEGK-AASAKLIR 144

Query: 64  SVIRQFYNFLCYEGLRKDNPSDTLELPKKNHILPKTLHKDTIANLLEQAKIEAENPAPGQ 123
           S +   +     EG    N        K      +    + +                 +
Sbjct: 145 STLSDAFREAIAEGHITTNHVAATRAAKSKVRRSRLTADEYLKI-----------YQAAE 193

Query: 124 WKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERTMIIQGKGNKERLVILSPSALHAL 183
                + L +EL   TG RV +L  +    +      +     G K  +          +
Sbjct: 194 SSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGI 253

Query: 184 QMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKK--NISPHIIR 241
            M +      ++ G +  +   ST+   LS    +R        +G+  +    + H +R
Sbjct: 254 SMKETLDKCKEILGGETIIA--STRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELR 311

Query: 242 HAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLV 285
              ++ L E     +  Q LLGH   +    Y      +  K+ 
Sbjct: 312 S-LSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIE 354