RPSBLAST alignment of GI: 255764498 and protein with PDBid: 3nkh

>3nkh_A Integrase; alpha-fold, MRSA protein, structural genomics, PSI-2, protei structure initiative; 2.50A {Staphylococcus aureus subsp} Length = 244
 Score =  106 bits (265), Expect = 6e-24
 Identities = 46/227 (20%), Positives = 91/227 (40%), Gaps = 28/227 (12%)

Query: 87  LELPKKNHILPKT--LHKDTIANLLEQAKIEAENPAPGQWKRVRIF--LLIELLYATGMR 142
           ++L  +N        L  + I ++++    +A+    G  KR  +F  L+ E     GMR
Sbjct: 11  VDLGTENLYFQSNAYLELNEIESIIKDINTKAQKMHSGIHKRFYLFVALMTEFQALNGMR 70

Query: 143 VSELVTLSAHTLNLTERTMIIQG-------------------KGNKERLVILSPSALHAL 183
           + E++ +    ++   +++ I G                     +  R + LS  +   L
Sbjct: 71  IGEMLAIQNEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEIL 130

Query: 184 QMYKKTCSSMKMTGN---DLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHII 240
           +             +   +     ++ K   +  + F + L+  A   GI K  +S HI+
Sbjct: 131 KKAILENKKDSKWNDGYLNRNFVFTNHKGNPMQTERFNKILREAAKDVGIDK-EVSSHIL 189

Query: 241 RHAFASHLLEGGADLRTIQILLGHTDISTT-QIYTHLLPDKLQKLVQ 286
           RH+  S L + G  L+ I   +GH+D  TT  IY+H+     + ++ 
Sbjct: 190 RHSHISLLSQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMN 236