Query         gi|255764499|ref|YP_003064993.2| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 266
No_of_seqs    172 out of 4029
Neff          7.8 
Searched_HMMs 33803
Date          Wed Jun  1 18:00:32 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 255764499.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >1iuq_A Glycerol-3-phosphate a 100.0 1.3E-32   4E-37  212.1   7.4  184   60-243    38-269 (288)
  2 >3ilv_A Glutamine-dependent NA  73.7     4.5 0.00013   19.6   3.9   42  143-184   180-221 (273)
  3 >1uf5_A N-carbamyl-D-amino aci  68.1     7.2 0.00021   18.4   3.9   45  140-184   182-234 (303)
  4 >2e11_A Hydrolase; dimethylars  63.5     9.3 0.00028   17.7   3.8   42  143-184   157-202 (266)
  5 >1f89_A 32.5 kDa protein YLR35  63.5     9.5 0.00028   17.6   4.1   49  136-185   176-224 (291)
  6 >3dla_A Glutamine-dependent NA  52.4      15 0.00044   16.5   4.9   45  140-184   188-233 (322)
  7 >1j31_A Hypothetical protein P  52.2      15 0.00044   16.5   6.0   40  140-184   157-196 (262)
  8 >3hkx_A Amidase; alpha-beta-BE  49.4      10 0.00031   17.4   2.1   44  139-184   175-218 (283)
  9 >2vhh_A CG3027-PA; hydrolase;   48.8      17  0.0005   16.2   4.0   23  133-155    65-87  (324)
 10 >1ems_A Nitfhit, NIT-fragIle h  40.8      15 0.00044   16.5   1.8   44  141-185   181-224 (285)
 11 >2w1v_A Nitrilase-2, nitrilase  40.6      23 0.00067   15.4   4.6   46  139-185   163-208 (276)
 12 >3jur_A EXO-poly-alpha-D-galac  39.6      15 0.00043   16.5   1.6   11  145-155    58-68  (448)
 13 >1auo_A Carboxylesterase; hydr  36.7     9.6 0.00028   17.6   0.3   16  178-193     1-16  (30)
 14 >2rfb_A Cytochrome P450; heme,  29.2      35   0.001   14.3   2.4   27  223-249   142-168 (201)
 15 >1pq4_A Periplasmic binding pr  23.2      45  0.0013   13.6   4.5   69  106-183     8-78  (82)
 16 >2o1e_A YCDH; alpha-beta prote  20.1      53  0.0016   13.3   3.2   69  106-183     7-79  (82)

No 1  
>>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} (A:80-367)
Probab=99.97  E-value=1.3e-32  Score=212.14  Aligned_cols=184  Identities=12%  Similarity=0.100  Sum_probs=134.3

Q ss_pred             CEEEEEEEECC-CCEEEEEECCHHHHHHHHHHHHHC--------CCEEEEEECCCCCCCCHHEEECCEEEECCCCHHH--
Q ss_conf             18997400004-670699817801201232245412--------4212134212243310110000103421310100--
Q gi|255764499|r   60 TVQIEGVDNIP-STGCIIAIKHQSSWDTFYFLTCIQ--------DPIFILKHTVFYIPIIGFYCFKQGMIGVKRNSKN--  128 (266)
Q Consensus        60 ~v~v~G~e~l~-~~~~iiv~NH~S~~D~~~l~~~~~--------~~~~i~K~el~~~P~~g~~~~~~g~i~vdR~~~~--  128 (266)
                      ++.++|.++++ ++++|+++||+|++|++++..++.        ++.|++|+++++.|++||+++..|+|||||++..  
T Consensus        38 ~~~~~~~~~~~~~~~~i~v~NH~s~~D~~~l~~~l~~~~~~~~~~~~~va~~~l~~~p~~g~~~~~~g~i~v~R~~~~~~  117 (288)
T 1iuq_A           38 SLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHXFD  117 (288)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTS
T ss_pred             HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHCEEEEEEHHHCCCHHHHHHHHHCCEEEEECCCCCCC
T ss_conf             89999999643799889986874330599999997335633202338997603403567899998689779964787777


Q ss_pred             ----------HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC------CCCHH----HHHHHHHHCCCEEEEEEEEEE
Q ss_conf             ----------0000134433444201330234025643585200------21003----567655435945787865202
Q gi|255764499|r  129 ----------LDMKSIINRAKKAVMDNRQLIIYPEGTRRSPGDM------PIYKK----GIAHIYESLSVPVIPIVVHAG  188 (266)
Q Consensus       129 ----------~~~~~~~~~~~~~~~~g~~i~iFPEGTr~~~~~~------~~fk~----G~f~lA~~~~~pIvPv~i~~~  188 (266)
                                ++.+++.+.+.+.+++|.+++|||||||+.++..      .+|++    |++++|.++++||+|+.+++.
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~iliFPEGtrs~~~~~~~~~~~~~f~~g~~~~~~~la~~~~~pv~pv~i~~~  197 (288)
T 1iuq_A          118 IPELTETKRKANTRSLKEXALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNXRRLIQHSDVPGHLFPLALL  197 (288)
T ss_dssp             SGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEE
T ss_pred             CHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEC
T ss_conf             61344554111199999999999768859999468874676444576167645530467899987623999548967660


Q ss_pred             ---EECCC--------CCCCCCCCEEEEEECCCCCCC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             ---54468--------986345857999964888898------99789999999999999999999987507
Q gi|255764499|r  189 ---LFWPR--------KKFMRYPGNFKVRVLKPIPAG------IPRKIFFAELQEKMEHASNNLLLETIRDN  243 (266)
Q Consensus       189 ---~~~~~--------~~~~~~~g~v~v~~~~pI~~~------~~~~~~~~~l~~~i~~~~~~l~~e~~~~~  243 (266)
                         ..++.        ..+...++++++++|+||++.      +..++..+.+++.+++.++....|.....
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (288)
T 1iuq_A          198 CHDIXPPPSQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAXQYNVLKTAI  269 (288)
T ss_dssp             CGGGSCCC----------CCCCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             454469975333223422456776359997798567775322125689999999999999999999999987


No 2  
>>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406} (A:1-273)
Probab=73.69  E-value=4.5  Score=19.56  Aligned_cols=42  Identities=12%  Similarity=0.081  Sum_probs=23.3

Q ss_pred             HCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf             013302340256435852002100356765543594578786
Q gi|255764499|r  143 MDNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVIPIV  184 (266)
Q Consensus       143 ~~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIvPv~  184 (266)
                      ..+..+++.|-++-...+.......-+-..|.+++++++=+.
T Consensus       180 ~~~~~li~~~~~~~~~~~~~~~~~~~~~~~a~e~~~~vv~an  221 (273)
T 3ilv_A          180 EKGATLVLNPSASHFAFGKSAIRYDLVIGGSERFDCTYVYAN  221 (273)
T ss_dssp             GGTCSEEEEEECCBCCTTHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred             HCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECC
T ss_conf             503221026654443212578888888876531022145214


No 3  
>>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} (A:)
Probab=68.13  E-value=7.2  Score=18.37  Aligned_cols=45  Identities=7%  Similarity=-0.164  Sum_probs=22.6

Q ss_pred             HHHHCCCEEEEECCCCCCCCCCCCCCH--------HHHHHHHHHCCCEEEEEE
Q ss_conf             442013302340256435852002100--------356765543594578786
Q gi|255764499|r  140 KAVMDNRQLIIYPEGTRRSPGDMPIYK--------KGIAHIYESLSVPVIPIV  184 (266)
Q Consensus       140 ~~~~~g~~i~iFPEGTr~~~~~~~~fk--------~G~f~lA~~~~~pIvPv~  184 (266)
                      .....|-.+++.|-..-...+......        .-.-.-|.+.+++++=..
T Consensus       182 ~~~~~gadlii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~~v~an  234 (303)
T 1uf5_A          182 VMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAG  234 (303)
T ss_dssp             HHHHTTCSEEEEEECCBSCCTTCGGGGGGHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             HHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECC
T ss_conf             67628988999704556545444210011001246666666552453033136


No 4  
>>2e11_A Hydrolase; dimethylarsenic inhibitor complex, cacodylate; 1.73A {Xanthomonas campestris PV} (A:)
Probab=63.51  E-value=9.3  Score=17.70  Aligned_cols=42  Identities=7%  Similarity=-0.239  Sum_probs=20.0

Q ss_pred             HCCCEEEEECCCCCCC----CCCCCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf             0133023402564358----52002100356765543594578786
Q gi|255764499|r  143 MDNRQLIIYPEGTRRS----PGDMPIYKKGIAHIYESLSVPVIPIV  184 (266)
Q Consensus       143 ~~g~~i~iFPEGTr~~----~~~~~~fk~G~f~lA~~~~~pIvPv~  184 (266)
                      ..|..+++.|-.....    ......+..-+-..|.+++++++=+.
T Consensus       157 ~~ga~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~A~en~~~vv~~n  202 (266)
T 2e11_A          157 DVERPGQLDFDLQLFVANWPSARAYAWKTLLRARAIENLCFVAAVN  202 (266)
T ss_dssp             SSSSTTSBSCSEEEEEECCCGGGHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCC
T ss_conf             8641000042300132214776502555777776542374200133


No 5  
>>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} (A:)
Probab=63.50  E-value=9.5  Score=17.65  Aligned_cols=49  Identities=14%  Similarity=0.021  Sum_probs=29.5

Q ss_pred             HHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEE
Q ss_conf             43344420133023402564358520021003567655435945787865
Q gi|255764499|r  136 NRAKKAVMDNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVIPIVV  185 (266)
Q Consensus       136 ~~~~~~~~~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIvPv~i  185 (266)
                      +..+...++|..+++.|-.+....+.... ..-+-..|.+++++++-+.-
T Consensus       176 e~~r~l~~~ga~ii~~p~~~~~~~~~~~~-~~~~~~rA~e~~~~vv~~n~  224 (291)
T 1f89_A          176 ELAMLSARKGAFAMIYPSAFNTVTGPLHW-HLLARSRAVDNQVYVMLCSP  224 (291)
T ss_dssp             HHHHHHHHTTEEEEEEECCCBTTHHHHHH-HHHHHHHHHHHTSEEEEECC
T ss_pred             HHHHHHHHCCCEEEEECCCCCCCCCHHHH-HHHHHHHHHHCCCEEEEECC
T ss_conf             99999997899599987888787761230-10466688855707999844


No 6  
>>3dla_A Glutamine-dependent NAD(+) synthetase; glutaminase, ammonia tunneling, enzyme, glutamine-amido transferase, ATP-binding, ligase; HET: NXX ONL; 2.35A {Mycobacterium tuberculosis} (A:1-322)
Probab=52.41  E-value=15  Score=16.52  Aligned_cols=45  Identities=2%  Similarity=-0.183  Sum_probs=23.7

Q ss_pred             HHHHCCCEEEEECCCCCCCC-CCCCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf             44201330234025643585-2002100356765543594578786
Q gi|255764499|r  140 KAVMDNRQLIIYPEGTRRSP-GDMPIYKKGIAHIYESLSVPVIPIV  184 (266)
Q Consensus       140 ~~~~~g~~i~iFPEGTr~~~-~~~~~fk~G~f~lA~~~~~pIvPv~  184 (266)
                      .....|..+++.|--.-... ........-+-..|.+++++++-+.
T Consensus       188 ~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n  233 (322)
T 3dla_A          188 AEAALAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAA  233 (322)
T ss_dssp             HHHHHTTCCEEEEECCCCCCTTHHHHHHHHHHHHHHHTTSEEEEEC
T ss_pred             HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf             9998636753236655552101234788998999975287268863


No 7  
>>1j31_A Hypothetical protein PH0642; alpha-beta-BETA-alpha sandwich, structural genomics, unknown function; 1.60A {Pyrococcus horikoshii OT3} (A:)
Probab=52.17  E-value=15  Score=16.49  Aligned_cols=40  Identities=10%  Similarity=0.009  Sum_probs=23.9

Q ss_pred             HHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf             442013302340256435852002100356765543594578786
Q gi|255764499|r  140 KAVMDNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVIPIV  184 (266)
Q Consensus       140 ~~~~~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIvPv~  184 (266)
                      ...+.|..++++|-.+-..     ..+...-..|.+++++++-+.
T Consensus       157 ~~~~~g~diil~ps~~~~~-----~~~~~~~~~A~e~~~~vv~~n  196 (262)
T 1j31_A          157 TLALKGAEIIAHPANLVXP-----YAPRAXPIRALENRVYTITAD  196 (262)
T ss_dssp             HHHHTTCSEEEEECCCCSS-----CHHHHHHHHHHHHTCEEEEEC
T ss_pred             HHHHHCCCCEEECCCCCHH-----HHHHHHHHHHHHCCCEEEEEE
T ss_conf             9987445617741546336-----565568888763587599996


No 8  
>>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich, hydrolase; 1.66A {Nesterenkonia SP} (A:)
Probab=49.40  E-value=10  Score=17.41  Aligned_cols=44  Identities=11%  Similarity=0.098  Sum_probs=26.2

Q ss_pred             HHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf             4442013302340256435852002100356765543594578786
Q gi|255764499|r  139 KKAVMDNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVIPIV  184 (266)
Q Consensus       139 ~~~~~~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIvPv~  184 (266)
                      ....+.|-.+++.|-.+........  ..-+-.-|.+++++++=+.
T Consensus       175 ~~~~~~g~dil~~~s~~~~~~~~~~--~~~~~~rA~e~~~~vv~~n  218 (283)
T 3hkx_A          175 RAAAARGAQLVLVPTALAGDETSVP--GILLPARAVENGITLAYAN  218 (283)
T ss_dssp             HHHHHTTCSEEEEECCCBSCCTHHH--HTHHHHHHHHHTCEEEEEC
T ss_pred             HHHHHCCCCEEEECCCCCCCCCCCC--HHHHHHHHHHCCCCEEEEE
T ss_conf             9997377878999157889864211--0167889986468429975


No 9  
>>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A (A:36-359)
Probab=48.80  E-value=17  Score=16.17  Aligned_cols=23  Identities=13%  Similarity=0.065  Sum_probs=10.0

Q ss_pred             HHHHHHHHHHHCCCEEEEECCCC
Q ss_conf             13443344420133023402564
Q gi|255764499|r  133 SIINRAKKAVMDNRQLIIYPEGT  155 (266)
Q Consensus       133 ~~~~~~~~~~~~g~~i~iFPEGT  155 (266)
                      .+.+.+.+..++|-.+++|||-.
T Consensus        65 ~~~~~i~~A~~~gadlvV~PE~~   87 (324)
T 2vhh_A           65 KVKTMIKAAAEAGCNIVCTQEAW   87 (324)
T ss_dssp             HHHHHHHHHHHTTCSEEECCTTT
T ss_pred             HHHHHHHHHHHCCCCEEECCCCC
T ss_conf             99999999998699399846213


No 10 
>>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} (A:1-285)
Probab=40.81  E-value=15  Score=16.53  Aligned_cols=44  Identities=9%  Similarity=0.065  Sum_probs=26.1

Q ss_pred             HHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEE
Q ss_conf             420133023402564358520021003567655435945787865
Q gi|255764499|r  141 AVMDNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVIPIVV  185 (266)
Q Consensus       141 ~~~~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIvPv~i  185 (266)
                      ...+|..+++.|-+..... ....+..-+..-|.+++++++-+..
T Consensus       181 ~~~~gadii~~psa~~~~~-~~~~~~~~~~~~a~en~~~~v~~n~  224 (285)
T 1ems_A          181 NRKRGAQLLSFPSAFTLNT-GLAHWETLLRARAIENQCYVVAAAQ  224 (285)
T ss_dssp             HHHTTCSEEECCBCCCHHH-HHHHHHHHHHHHHHHHTCEEEECBB
T ss_pred             HHHCCCEEEEECCCCCCCC-CHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf             9877983999907888874-5999999999999986977999987


No 11 
>>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus} (A:)
Probab=40.57  E-value=23  Score=15.41  Aligned_cols=46  Identities=15%  Similarity=0.071  Sum_probs=30.4

Q ss_pred             HHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEE
Q ss_conf             44420133023402564358520021003567655435945787865
Q gi|255764499|r  139 KKAVMDNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVIPIVV  185 (266)
Q Consensus       139 ~~~~~~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIvPv~i  185 (266)
                      ....++|..+++.|-++-+..+. ......+-..|.+.+++++.+.-
T Consensus       163 ~~~~~~gadli~~~~~~~~~~~~-~~~~~~~~~~A~~~~~~vv~an~  208 (276)
T 2w1v_A          163 QIYAQRGCQLLVYPGAFNLTTGP-AHWELLQRARAVDNQVYVATASP  208 (276)
T ss_dssp             HHHHHTTEEEEEEECCCCTTHHH-HHHHHHHHHHHHHHTCEEEEECC
T ss_pred             HHHHHCCCCEEEECCCCCCCCCH-HHHHHHHHHHHHHCCCEEEEECC
T ss_conf             99998699889745767877537-78888999999973965999725


No 12 
>>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase, hydrolase; 2.05A {Thermotoga maritima} (A:)
Probab=39.58  E-value=15  Score=16.54  Aligned_cols=11  Identities=36%  Similarity=0.597  Sum_probs=4.6

Q ss_pred             CCEEEEECCCC
Q ss_conf             33023402564
Q gi|255764499|r  145 NRQLIIYPEGT  155 (266)
Q Consensus       145 g~~i~iFPEGT  155 (266)
                      |...+.||+||
T Consensus        58 ggg~v~iP~Gt   68 (448)
T 3jur_A           58 GGGRLIVPEGV   68 (448)
T ss_dssp             TCEEEEECSSE
T ss_pred             CCCEEEECCCE
T ss_conf             99899999987


No 13 
>>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} (A:51-80)
Probab=36.73  E-value=9.6  Score=17.63  Aligned_cols=16  Identities=25%  Similarity=0.623  Sum_probs=12.9

Q ss_pred             CEEEEEEEEEEEECCC
Q ss_conf             4578786520254468
Q gi|255764499|r  178 VPVIPIVVHAGLFWPR  193 (266)
Q Consensus       178 ~pIvPv~i~~~~~~~~  193 (266)
                      +|..||++|+|..+|.
T Consensus         1 AP~~pVTiN~G~~Mpa   16 (30)
T 1auo_A            1 APTRPVTINGGYEMPS   16 (30)
T ss_dssp             CCEEEEGGGTTEEEEC
T ss_pred             HHCCCCCCCCCCCCCC
T ss_conf             1104513489855576


No 14 
>>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* (A:68-230,A:283-320)
Probab=29.17  E-value=35  Score=14.30  Aligned_cols=27  Identities=11%  Similarity=0.260  Sum_probs=16.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             999999999999999987507877888
Q gi|255764499|r  223 ELQEKMEHASNNLLLETIRDNPQLYIP  249 (266)
Q Consensus       223 ~l~~~i~~~~~~l~~e~~~~~~~~~~~  249 (266)
                      ++++++++.+++...|+.+-.|..|.|
T Consensus       142 e~q~klr~Eid~vi~E~lRl~p~~~~p  168 (201)
T 2rfb_A          142 DIIDDALKNRSGFVEETLRYYSEMHLA  168 (201)
T ss_dssp             GGHHHHHHCHHHHHHHHHHHSCSCCCT
T ss_pred             CHHHHHHHHCCCCHHHHHHCCCCCCCC
T ss_conf             101122010023312310102688776


No 15 
>>1pq4_A Periplasmic binding protein component of AN ABC type zinc uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} (A:189-270)
Probab=23.18  E-value=45  Score=13.63  Aligned_cols=69  Identities=9%  Similarity=0.207  Sum_probs=38.5

Q ss_pred             CCCCCHHEEECCEEEE--CCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEE
Q ss_conf             4331011000010342--13101000000134433444201330234025643585200210035676554359457878
Q gi|255764499|r  106 YIPIIGFYCFKQGMIG--VKRNSKNLDMKSIINRAKKAVMDNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVIPI  183 (266)
Q Consensus       106 ~~P~~g~~~~~~g~i~--vdR~~~~~~~~~~~~~~~~~~~~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIvPv  183 (266)
                      .-+-|+++++..|.-.  +--.+...+-+++. ...+.+++...-+||.|=.-+.        +.+-.+|.++|++++++
T Consensus         8 ~H~af~Y~a~~ygl~~~~~i~~~~eps~~~i~-~l~~~ik~~~i~~if~e~~~~~--------k~~~~ia~etg~~~~~l   78 (82)
T 1pq4_A            8 FHPSWAYFARDYNLVQIPIEVEGQEPSAQELK-QLIDTAKENNLTMVFGETQFST--------KSSEAIAAEIGAGVELL   78 (82)
T ss_dssp             SSCCCHHHHHHTTCEEEESCBTTBCCCHHHHH-HHHHHHHTTTCCEEEEETTSCC--------HHHHHHHHHHTCEEEEE
T ss_pred             CCCHHHHHHHHCCCCEEECCCCCCCCCHHHHH-HHHHHHHHCCCCEEEECCCCCC--------HHHHHHHHHHCCCEEEE
T ss_conf             27408999996799352044678899989999-9999999749988997289991--------99999999809987987


No 16 
>>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis} (A:190-271)
Probab=20.09  E-value=53  Score=13.25  Aligned_cols=69  Identities=10%  Similarity=0.122  Sum_probs=36.7

Q ss_pred             CCCCCHHEEECCEEEE--CCC--CHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEE
Q ss_conf             4331011000010342--131--010000001344334442013302340256435852002100356765543594578
Q gi|255764499|r  106 YIPIIGFYCFKQGMIG--VKR--NSKNLDMKSIINRAKKAVMDNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVI  181 (266)
Q Consensus       106 ~~P~~g~~~~~~g~i~--vdR--~~~~~~~~~~~~~~~~~~~~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIv  181 (266)
                      ..+-|+++++..|.-.  +-.  .+...+.+++.+..+ .+++...=+||.|=.-. +       +.+-.+|.++|++++
T Consensus         7 ~H~af~Yf~~~ygl~~~~~~~~~~~~~ps~~~i~~l~~-~ik~~~i~~if~e~~~~-~-------k~~~~ia~~~g~~v~   77 (82)
T 2o1e_A            7 QHTAFGYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKT-YAKEHNVKVIYFEEIAS-S-------KVADTLASEIGAKTE   77 (82)
T ss_dssp             SSCTTHHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHH-HTTSSCCCEEECSSCCC-H-------HHHHHHHHHTCCEEE
T ss_pred             ECCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHH-HHHHCCCCEEEEECCCC-C-------HHHHHHHHHHCCCEE
T ss_conf             52136668874684476402356522213357999998-76525886899948889-4-------999999997199765


Q ss_pred             EE
Q ss_conf             78
Q gi|255764499|r  182 PI  183 (266)
Q Consensus       182 Pv  183 (266)
                      ++
T Consensus        78 ~l   79 (82)
T 2o1e_A           78 VL   79 (82)
T ss_dssp             CC
T ss_pred             EE
T ss_conf             54


Done!