Query gi|255764499|ref|YP_003064993.2| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 266
No_of_seqs 172 out of 4029
Neff 7.8
Searched_HMMs 23785
Date Tue May 31 19:54:12 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 255764499.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1iuq_A Glycerol-3-phosphate ac 99.9 1.4E-27 5.8E-32 181.6 11.7 175 60-234 110-339 (367)
2 1uf5_A N-carbamyl-D-amino acid 67.9 5.5 0.00023 18.2 4.1 13 172-184 222-234 (303)
3 1ems_A Nitfhit, NIT-fragIle hi 64.1 5.9 0.00025 18.0 3.6 12 145-156 236-247 (440)
4 2w1v_A Nitrilase-2, nitrilase 55.5 8.3 0.00035 17.1 3.1 45 139-184 163-207 (276)
5 3hkx_A Amidase; alpha-beta-BET 54.3 8 0.00034 17.2 2.9 41 141-183 177-217 (283)
6 1f89_A 32.5 kDa protein YLR351 46.1 13 0.00055 15.9 3.9 43 141-184 181-223 (291)
7 3ivz_A Nitrilase; alpha-beta s 41.5 9.5 0.0004 16.8 1.7 38 141-183 158-195 (262)
8 1jid_A Signal recognition part 41.0 16 0.00066 15.4 6.7 83 143-228 11-112 (128)
9 3n05_A NH(3)-dependent NAD(+) 37.2 13 0.00053 16.0 1.7 40 144-183 179-218 (590)
10 3ilv_A Glutamine-dependent NAD 33.3 16 0.00066 15.5 1.7 42 143-184 180-221 (634)
11 3dla_A Glutamine-dependent NAD 28.2 21 0.0009 14.7 1.7 41 143-183 192-232 (680)
12 2vhh_A CG3027-PA; hydrolase; 2 27.5 22 0.00093 14.6 1.7 40 143-183 248-287 (405)
13 3lyh_A Cobalamin (vitamin B12) 21.7 24 0.001 14.3 1.0 65 165-233 50-122 (126)
14 2vji_A Tailspike protein; vira 20.8 22 0.00094 14.5 0.6 25 128-155 64-88 (600)
No 1
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=99.95 E-value=1.4e-27 Score=181.58 Aligned_cols=175 Identities=11% Similarity=0.152 Sum_probs=125.2
Q ss_pred CEEEEEEE-------ECCC-CEEEEEECCHHHHHHHHHHHHHC--------CCEEEEEECCCCCCCCHHEEECCEEEECC
Q ss_conf 18997400-------0046-70699817801201232245412--------42121342122433101100001034213
Q gi|255764499|r 60 TVQIEGVD-------NIPS-TGCIIAIKHQSSWDTFYFLTCIQ--------DPIFILKHTVFYIPIIGFYCFKQGMIGVK 123 (266)
Q Consensus 60 ~v~v~G~e-------~l~~-~~~iiv~NH~S~~D~~~l~~~~~--------~~~~i~K~el~~~P~~g~~~~~~g~i~vd 123 (266)
+-.+.|.+ ++++ +++|++|||+|++|++++..+++ +..|++|+++++.|++|++++..|+++|+
T Consensus 110 ~s~v~~~~~l~~~~E~l~~g~~VIlvsNHqS~~D~~il~~ll~~~~~~l~~~~~f~a~~~l~~~pl~~~~~~~~~~i~V~ 189 (367)
T 1iuq_A 110 NSFVGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVY 189 (367)
T ss_dssp GCEEECHHHHHHHHHHHHTTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTTTHHHHHTSEEEECC
T ss_pred CCEEECHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHCEEEEEEHHHHHCHHHHHHHHHCCEEEEE
T ss_conf 54662688999999730489988998788314159999999621462343511788521564163799999878967996
Q ss_pred CCHH-----------HHHHHHHHHHHHHHHHCCC-EEEEECCCCCCCCCC----C------CCCHHHHHHHHHHCCCE--
Q ss_conf 1010-----------0000013443344420133-023402564358520----0------21003567655435945--
Q gi|255764499|r 124 RNSK-----------NLDMKSIINRAKKAVMDNR-QLIIYPEGTRRSPGD----M------PIYKKGIAHIYESLSVP-- 179 (266)
Q Consensus 124 R~~~-----------~~~~~~~~~~~~~~~~~g~-~i~iFPEGTr~~~~~----~------~~fk~G~f~lA~~~~~p-- 179 (266)
|++. .++....++.+.+.+++|. .+.|||||||++++. . ..+|.|++++|.++++|
T Consensus 190 r~~~i~~~p~l~~~k~~~~~~al~~~~~~L~~g~~~i~IfPEGtRsr~~~~~g~~~p~~~~~~~k~g~~~La~~s~~p~~ 269 (367)
T 1iuq_A 190 SKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGH 269 (367)
T ss_dssp CGGGTTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCE
T ss_conf 48876667102245556679999999999964996999958877778776667657631013576799999971599967
Q ss_pred EEEEEEEEEEEC-CCCC--------CCCCCCEEEEEECCCCCCC------CCHHHHHHHHHHHHHHHHHH
Q ss_conf 787865202544-6898--------6345857999964888898------99789999999999999999
Q gi|255764499|r 180 VIPIVVHAGLFW-PRKK--------FMRYPGNFKVRVLKPIPAG------IPRKIFFAELQEKMEHASNN 234 (266)
Q Consensus 180 IvPv~i~~~~~~-~~~~--------~~~~~g~v~v~~~~pI~~~------~~~~~~~~~l~~~i~~~~~~ 234 (266)
|+||+++++... |... .....+.|+|.||+||+.. .+.++..+.+.+.+.+++.+
T Consensus 270 IvPvai~~~d~~pp~~~~~~~ige~r~~~~~~V~V~~G~pId~~~~~~~~~~~~e~~~~~t~~i~d~v~e 339 (367)
T 1iuq_A 270 LFPLALLCHDIMPPPSQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAM 339 (367)
T ss_dssp EEEEEEECGGGSCCC----------CCCCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9944551552458975320000201457778538997498657776422344067899999999999999
No 2
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=67.95 E-value=5.5 Score=18.16 Aligned_cols=13 Identities=0% Similarity=-0.560 Sum_probs=8.6
Q ss_pred HHHHCCCEEEEEE
Q ss_conf 5543594578786
Q gi|255764499|r 172 IYESLSVPVIPIV 184 (266)
Q Consensus 172 lA~~~~~pIvPv~ 184 (266)
-|.+++++++-+.
T Consensus 222 rA~en~~~vv~~n 234 (303)
T 1uf5_A 222 GSYQNGAWSAAAG 234 (303)
T ss_dssp HHHHHTCEEEEEE
T ss_pred HHHHCCCEEEEEC
T ss_conf 7745597399966
No 3
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=64.14 E-value=5.9 Score=17.96 Aligned_cols=12 Identities=17% Similarity=0.443 Sum_probs=6.9
Q ss_pred CCEEEEECCCCC
Q ss_conf 330234025643
Q gi|255764499|r 145 NRQLIIYPEGTR 156 (266)
Q Consensus 145 g~~i~iFPEGTr 156 (266)
|.|.++=|.|+.
T Consensus 236 G~S~Iv~P~G~v 247 (440)
T 1ems_A 236 GHSMVVDPWGAV 247 (440)
T ss_dssp CCCEEECTTSCE
T ss_pred EEEEEECCCCCE
T ss_conf 115999189858
No 4
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=55.45 E-value=8.3 Score=17.11 Aligned_cols=45 Identities=16% Similarity=0.073 Sum_probs=24.9
Q ss_pred HHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 4442013302340256435852002100356765543594578786
Q gi|255764499|r 139 KKAVMDNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVIPIV 184 (266)
Q Consensus 139 ~~~~~~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIvPv~ 184 (266)
.....+|..+++.|-..-...+ ........-.-|.+++++++-+.
T Consensus 163 r~l~~~g~~ii~~~~a~~~~~~-~~~~~~~~~~rA~en~~~vv~~n 207 (276)
T 2w1v_A 163 QIYAQRGCQLLVYPGAFNLTTG-PAHWELLQRARAVDNQVYVATAS 207 (276)
T ss_dssp HHHHHTTEEEEEEECCCCTTHH-HHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHCCCCEEEECCCCCCCCC-HHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 9999869987972453457752-67776688899986596699972
No 5
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich, hydrolase; 1.66A {Nesterenkonia SP}
Probab=54.33 E-value=8 Score=17.20 Aligned_cols=41 Identities=10% Similarity=0.030 Sum_probs=22.6
Q ss_pred HHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEE
Q ss_conf 4201330234025643585200210035676554359457878
Q gi|255764499|r 141 AVMDNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVIPI 183 (266)
Q Consensus 141 ~~~~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIvPv 183 (266)
....|..+++.|-..-..... ..+.-+-.-|.+++++++=+
T Consensus 177 la~~ga~iil~ps~~~~~~~~--~~~~~~~arA~en~~~vv~~ 217 (283)
T 3hkx_A 177 AAARGAQLVLVPTALAGDETS--VPGILLPARAVENGITLAYA 217 (283)
T ss_dssp HHHTTCSEEEEECCCBSCCTH--HHHTHHHHHHHHHTCEEEEE
T ss_pred HHHCCCCEEEECCCCCCCCCC--CCHHHHHHHHHHCCCEEEEE
T ss_conf 763576199985468998642--22016788998558659999
No 6
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=46.10 E-value=13 Score=15.92 Aligned_cols=43 Identities=14% Similarity=0.054 Sum_probs=21.5
Q ss_pred HHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 42013302340256435852002100356765543594578786
Q gi|255764499|r 141 AVMDNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVIPIV 184 (266)
Q Consensus 141 ~~~~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIvPv~ 184 (266)
...++..++++|-..-..... .....-.-..|.+.+++++=+.
T Consensus 181 l~~~~~~li~~~~~~~~~~~~-~~~~~~~~~~A~~~~~~vv~~n 223 (291)
T 1f89_A 181 SARKGAFAMIYPSAFNTVTGP-LHWHLLARSRAVDNQVYVMLCS 223 (291)
T ss_dssp HHHTTEEEEEEECCCBTTHHH-HHHHHHHHHHHHHHTSEEEEEC
T ss_pred HHHCCCCEEEECCCCCCCCCH-HHHHHHHHHHHHHHCCCEEEEC
T ss_conf 875587168842446665452-4555479999998088689964
No 7
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi GE5} PDB: 3iw3_A 1j31_A
Probab=41.54 E-value=9.5 Score=16.77 Aligned_cols=38 Identities=8% Similarity=0.022 Sum_probs=22.4
Q ss_pred HHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEE
Q ss_conf 4201330234025643585200210035676554359457878
Q gi|255764499|r 141 AVMDNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVIPI 183 (266)
Q Consensus 141 ~~~~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIvPv 183 (266)
...+|-.+++.|-.+...... ...-.-|.+++++++=+
T Consensus 158 ~~~~Gadli~~ps~~~~~~~~-----~~~~~rA~en~~~vv~a 195 (262)
T 3ivz_A 158 LALKGADVIAHPANLVMPYAP-----RAMPIRALENKVYTVTA 195 (262)
T ss_dssp HHHTTCSEEEEEECCCSSCHH-----HHHHHHHHHHTCEEEEE
T ss_pred HHHCCCCEEEECCCCCCCCCC-----CHHHHHHHHCCCEEEEE
T ss_conf 987299678832456675332-----05778998669649998
No 8
>1jid_A Signal recognition particle 19 kDa protein; signal recognition particle (SRP), protein-RNA complex, GGAG tetraloop, signaling protein/RNA complex; HET: 5BU A23; 1.80A {Homo sapiens} SCOP: d.201.1.1 PDB: 3ktv_B* 1mfq_B* 1ry1_B* 2go5_B 2j37_B
Probab=40.95 E-value=16 Score=15.44 Aligned_cols=83 Identities=19% Similarity=0.287 Sum_probs=47.2
Q ss_pred HCCCEEEEEC----------CCCCCCCCC--CCCCHHHHHHHHHHCCCEEEEEEEEEEEECCCCCC--CCCCCEEEEEE-
Q ss_conf 0133023402----------564358520--02100356765543594578786520254468986--34585799996-
Q gi|255764499|r 143 MDNRQLIIYP----------EGTRRSPGD--MPIYKKGIAHIYESLSVPVIPIVVHAGLFWPRKKF--MRYPGNFKVRV- 207 (266)
Q Consensus 143 ~~g~~i~iFP----------EGTr~~~~~--~~~fk~G~f~lA~~~~~pIvPv~i~~~~~~~~~~~--~~~~g~v~v~~- 207 (266)
+...+++||| ||.|..... -.|--.-....+...|++.+ +.....+|+..+ +...|+|.|.+
T Consensus 11 d~~r~iiIyP~Y~Ds~~tr~eGRRV~k~~aV~~Pt~~EI~~a~~~Lgl~~~---~E~~K~yPr~w~~~~~~~GRVrV~lk 87 (128)
T 1jid_A 11 DQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVF---LEKNKMYSREWNRDVQYRGRVRVQLK 87 (128)
T ss_dssp SGGGSEEECGGGGBTTSCTTTTCCSCTTTCBSSCCHHHHHHHHHHTTCCEE---EETTCCCTTCCCCCGGGCCEEEECCB
T ss_pred CCCCCEEECCCCCCCCCCHHHCCCCCHHHHCCCCCHHHHHHHHHHCCCCEE---EECCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 665668977740158887552566488784679899999999998599878---73377787443553335865999876
Q ss_pred ---CCCCCCCC-CHHHHHHHHHHHH
Q ss_conf ---48888989-9789999999999
Q gi|255764499|r 208 ---LKPIPAGI-PRKIFFAELQEKM 228 (266)
Q Consensus 208 ---~~pI~~~~-~~~~~~~~l~~~i 228 (266)
|.|+.++. ++.+.+..+.+.|
T Consensus 88 ~~~G~~~~~~~~sK~~Ll~~Ia~~I 112 (128)
T 1jid_A 88 QEDGSLCLVQFPSRKSVMLYAAEMI 112 (128)
T ss_dssp CTTSCBSCTTCSSHHHHHHHHHHHG
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 7999874788899999999999988
No 9
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=37.19 E-value=13 Score=16.03 Aligned_cols=40 Identities=3% Similarity=-0.066 Sum_probs=15.7
Q ss_pred CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEE
Q ss_conf 1330234025643585200210035676554359457878
Q gi|255764499|r 144 DNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVIPI 183 (266)
Q Consensus 144 ~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIvPv 183 (266)
.|..+++.|-..-...++...-..-.-.-|.+.+++++=+
T Consensus 179 ~ga~lii~~sas~~~~~k~~~r~~~~~~ra~~~~~~vv~~ 218 (590)
T 3n05_A 179 AGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYL 218 (590)
T ss_dssp TTCSEEEEEECCBCCCCSSCHHHHHHHHHHHHHTSEEEEE
T ss_pred CCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 4645445766211025738999999999998529853521
No 10
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=33.26 E-value=16 Score=15.48 Aligned_cols=42 Identities=12% Similarity=0.081 Sum_probs=21.5
Q ss_pred HCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 013302340256435852002100356765543594578786
Q gi|255764499|r 143 MDNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVIPIV 184 (266)
Q Consensus 143 ~~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIvPv~ 184 (266)
..|-.+++-|-+.-...++....+.=.-..|.++++|++=+-
T Consensus 180 ~~gadli~n~sAsp~~~~k~~~r~~l~~~~a~~~~~~~vy~N 221 (634)
T 3ilv_A 180 EKGATLVLNPSASHFAFGKSAIRYDLVIGGSERFDCTYVYAN 221 (634)
T ss_dssp GGTCSEEEEEECCBCCTTHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECC
T ss_conf 357458844555544432499999999999986287089515
No 11
>3dla_A Glutamine-dependent NAD(+) synthetase; glutaminase, ammonia tunneling, enzyme, glutamine-amido transferase, ATP-binding, ligase; HET: NXX ONL; 2.35A {Mycobacterium tuberculosis}
Probab=28.16 E-value=21 Score=14.66 Aligned_cols=41 Identities=5% Similarity=-0.059 Sum_probs=16.7
Q ss_pred HCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEE
Q ss_conf 01330234025643585200210035676554359457878
Q gi|255764499|r 143 MDNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVIPI 183 (266)
Q Consensus 143 ~~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIvPv 183 (266)
..|..+++-|.+.-...++...-..-+-..+.+.+.+++=+
T Consensus 192 ~~Ga~ii~~~sAsp~~~~k~~~r~~l~~~~a~~~~~~~v~~ 232 (680)
T 3dla_A 192 LAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYA 232 (680)
T ss_dssp HTTCCEEEEECCCCCCTTHHHHHHHHHHHHHHHTTSEEEEE
T ss_pred HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 76996434642000110014578899999999836763366
No 12
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=27.46 E-value=22 Score=14.57 Aligned_cols=40 Identities=15% Similarity=0.301 Sum_probs=19.6
Q ss_pred HCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEE
Q ss_conf 01330234025643585200210035676554359457878
Q gi|255764499|r 143 MDNRQLIIYPEGTRRSPGDMPIYKKGIAHIYESLSVPVIPI 183 (266)
Q Consensus 143 ~~g~~i~iFPEGTr~~~~~~~~fk~G~f~lA~~~~~pIvPv 183 (266)
..|..+++.|-.+-...+. .....-+-.-|.++++.|+-+
T Consensus 248 ~~GAdii~~Ps~~~~~~~~-~~~~~~~~~rAieN~~~Vv~a 287 (405)
T 2vhh_A 248 LNGAEIVFNPSATIGRLSE-PLWSIEARNAAIANSYFTVPI 287 (405)
T ss_dssp HTTCSEEEEEECCBCTTTH-HHHHHHHHHHHHHHTSEEEEE
T ss_pred CCCCEEEEECCCCCCCHHH-HHHHHHHHHHHHHCCCEEEEE
T ss_conf 1898199956877873157-899989999999809769998
No 13
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=21.74 E-value=24 Score=14.35 Aligned_cols=65 Identities=14% Similarity=0.266 Sum_probs=31.5
Q ss_pred CHHHHHHHHHH--CCCEEEEEEEEEEE-EC---CC--CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 00356765543--59457878652025-44---68--9863458579999648888989978999999999999999
Q gi|255764499|r 165 YKKGIAHIYES--LSVPVIPIVVHAGL-FW---PR--KKFMRYPGNFKVRVLKPIPAGIPRKIFFAELQEKMEHASN 233 (266)
Q Consensus 165 fk~G~f~lA~~--~~~pIvPv~i~~~~-~~---~~--~~~~~~~g~v~v~~~~pI~~~~~~~~~~~~l~~~i~~~~~ 233 (266)
+..+.-.+..+ ..+-++|..+..|. +. |. ......++ +.+.+.+|+.+. ....+-+.++++++++
T Consensus 50 l~~~l~~l~~~g~~~vvvvP~fl~~G~h~~~dip~~~~~~~~~~~-~~i~~~~~lg~~---p~l~~~l~~ri~eal~ 122 (126)
T 3lyh_A 50 LDTIVNRAKGQGVEQFTVVPLFLAAGRHLRKDVPAMIERLEAEHG-VTIRLAEPIGKN---PRLGLAIRDVVKEELE 122 (126)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCSCCCHHHHHHHHHHHHHHHHHHT-CEEEECCCGGGS---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC-CEEEECCCCCCC---HHHHHHHHHHHHHHHH
T ss_conf 999999999769987999981325661146569999999998469-669987878798---7999999999999986
No 14
>2vji_A Tailspike protein; viral protein, viral adhesion protein, endo-N- acetylglucosaminidase, right-handed parallel beta-helix, hydrolase; 1.38A {Bacteriophage HK620} PDB: 2vjj_A*
Probab=20.76 E-value=22 Score=14.55 Aligned_cols=25 Identities=16% Similarity=0.242 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 0000013443344420133023402564
Q gi|255764499|r 128 NLDMKSIINRAKKAVMDNRQLIIYPEGT 155 (266)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~~i~iFPEGT 155 (266)
++++++.++.+. +.|.--+++|+|+
T Consensus 64 ~qaIq~AID~~~---~~GGGtViIPaG~ 88 (600)
T 2vji_A 64 RQYLQAAIDYVS---SNGGGTITIPAGY 88 (600)
T ss_dssp HHHHHHHHHHHH---HTTCEEEEECTTC
T ss_pred HHHHHHHHHHHH---HCCCEEEEECCCC
T ss_conf 799999999998---6698079977982
Done!