HHsearch alignment for GI: 255764501 and conserved domain: COG0395
>COG0395 UgpE ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].
Probab=100.00 E-value=6.3e-35 Score=202.58 Aligned_cols=241 Identities=18% Similarity=0.271 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-------------------CHHHHHHHHCCH-HHHHHHHHHHHHHHHHHH
Q ss_conf 145469999999999997412322100011-------------------001346764383-547999999999999765
Q gi|255764501|r 285 RWSRWWDFFLISCAIWFFILPLLAIIIEGM-------------------NAKLLLRLLQQS-GLWSSFFNSIYIAINAGV 344 (535)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~i~pl~~ii~~~~-------------------~~~~~~~~~~~~-~~~~a~~~Sl~~s~~~~~ 344 (535)
T Consensus 8 ~~~~~~~~~~l~~~~~~~l~P~~~~~~~Sfk~~~~i~~~~~~~~~P~~~t~~ny~~~~~~~~~~~~~~~NS~iva~~~t~ 87 (281)
T COG0395 8 KIRKILLYLLLILVALLFLFPLYWMILTSFKPSAEIFSGPPPSLWPSSFTLENYRTVFSGGPGFLRYFLNSLIVAVGSTV 87 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 69999999999999999999999999999399999953798768999763899999998347899999989999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECHHHHHH
Q ss_conf 66521111221000221156512679999999746553237667664301234677566553443102465212156999
Q gi|255764501|r 345 LCMIFTIMLLWTKRELRLRRLKFFNHIFELSELLILAVPSIVLAVGFFLLLKNTVNLTSSSYSLIIVTNALMAVPYAVKI 424 (535)
Q Consensus 345 i~~~l~l~~a~~~~~~~~~~~~~~~~~~~~~~~lp~~iP~iv~~~~~~~~~~~~~~~~~~~~~~iila~~~~~lP~~~~~ 424 (535)
T Consensus 88 l~~~~~~laaYalar~~f~g~~----~l~~~~l~~~m~P~~v~~iPl~~~~~~--lgl~nt~~glil~~~~~~~pf~ifl 161 (281)
T COG0395 88 LSLLLSSLAAYALARFRFKGRK----LLFLLLLLTLMLPAQVLLIPLYLLMRK--LGLLNTYWGLILPYLAFGLPFAIFL 161 (281)
T ss_pred HHHHHHHHHHHHHHHHHCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999989999985336099----999999999985699999989999998--2661047999999999988899999
Q ss_pred HHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE-CCCCCCHHHHHHHHHHH--
Q ss_conf 999897289778999997397876999999999546899999999999985110116786-48983028989998861--
Q gi|255764501|r 425 LENPMYDLAERYNALCISLQIKGINRLYLIEFKALKRLMAQTFSFSCLLSIGDFGIIALF-GNDNFCTLPCYLYQQLG-- 501 (535)
Q Consensus 425 l~~~l~~i~~~l~eaA~~lGa~~~~~f~~I~lPll~p~i~~~~~l~f~~s~~e~~~~~ll-~~~~~~Tl~~~i~~~~~-- 501 (535)
T Consensus 162 ~~~ff~~iP~eLeEAA~iDGas~~~if~kI~lPl~~P~iaa~aI~~fi~~WN~fl~pli~~~~~~~~tl~v~l~~~~~~~ 241 (281)
T COG0395 162 LRQFFRTIPKELEEAARIDGASEFQIFFKIVLPLAKPGLAAVAIFTFIGAWNEFLWPLILLSSPNLLTLPVGLNSFGGSE 241 (281)
T ss_pred HHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
T ss_conf 99999869899999999828965789999998703789999999999999999999999918876421999999963433
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf -798136999999999999999999999714
Q gi|255764501|r 502 -SYRQSDAVVTALLLLSLCLGLFSLLEYLSG 531 (535)
Q Consensus 502 -~~~~~~a~a~a~il~~i~~~~~~l~~~l~~ 531 (535)
T Consensus 242 ~~~~w~~~~A~~vi~~lP~li~f~~~Qr~~v 272 (281)
T COG0395 242 GGTDWGLIMAAAVLAILPVLIVFLFFQRYFV 272 (281)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5666899999999999999999999999999