HHsearch alignment for GI: 255764501 and conserved domain: COG4239
>COG4239 ABC-type uncharacterized transport system, permease component [General function prediction only].
Probab=98.46 E-value=1.1e-06 Score=52.18 Aligned_cols=160 Identities=11% Similarity=-0.008 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99999999999976566521111221000221156512679999999746553237667664301234677566553443
Q gi|255764501|r 330 SSFFNSIYIAINAGVLCMIFTIMLLWTKRELRLRRLKFFNHIFELSELLILAVPSIVLAVGFFLLLKNTVNLTSSSYSLI 409 (535)
Q Consensus 330 ~a~~~Sl~~s~~~~~i~~~l~l~~a~~~~~~~~~~~~~~~~~~~~~~~lp~~iP~iv~~~~~~~~~~~~~~~~~~~~~~i 409 (535)
T Consensus 138 ygfRiSvLfgL~lT~~SaliGv~~GA~qGyfgg~vdL~~QRfIEvws~mP~lyllii~as----~~~p-~---f~~ll~i 209 (341)
T COG4239 138 YGFRISVLFGLSLTLISALIGVLAGALQGYFGGWVDLLGQRFIEVWSGMPTLYLLIILAS----IFQP-N---FWWLLGI 209 (341)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHH----HHCC-C---HHHHHHH
T ss_conf 999999999999999999999988877534130048877059999844729999999999----9685-4---7999999
Q ss_pred CEEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC---C
Q ss_conf 1024652121569999998972897789999973978769999999995468999999999999851101167864---8
Q gi|255764501|r 410 IVTNALMAVPYAVKILENPMYDLAERYNALCISLQIKGINRLYLIEFKALKRLMAQTFSFSCLLSIGDFGIIALFG---N 486 (535)
Q Consensus 410 ila~~~~~lP~~~~~l~~~l~~i~~~l~eaA~~lGa~~~~~f~~I~lPll~p~i~~~~~l~f~~s~~e~~~~~ll~---~ 486 (535)
T Consensus 210 ~llf~Wm~lv~vvR--aefLr~Rn~dYvkAArAlGv~d~~Ii~rHilPnamvatlTflPf~l~~sitTltsLdFLgfglp 287 (341)
T COG4239 210 MLLFGWMSLVGVVR--AEFLRARNLDYVKAARALGVSDRRIILRHILPNAMVATLTFLPFILSGSITTLTSLDFLGFGLP 287 (341)
T ss_pred HHHHHHHHHHHHHH--HHHHHHCCHHHHHHHHHCCCCCCEEEHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
T ss_conf 99999999999999--9999860268899999739886503021326298899999878987063323001666526999
Q ss_pred CCCCHHHHHHHHH
Q ss_conf 9830289899988
Q gi|255764501|r 487 DNFCTLPCYLYQQ 499 (535)
Q Consensus 487 ~~~~Tl~~~i~~~ 499 (535)
T Consensus 288 ~gspSLGELl~qg 300 (341)
T COG4239 288 PGSPSLGELLNQG 300 (341)
T ss_pred CCCCCHHHHHHHH
T ss_conf 9996789999976